Citrus Sinensis ID: 042823
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 477 | 2.2.26 [Sep-21-2011] | |||||||
| Q38868 | 541 | Calcium-dependent protein | yes | no | 0.935 | 0.824 | 0.578 | 1e-153 | |
| Q9C6P3 | 521 | Calcium-dependent protein | no | no | 0.920 | 0.842 | 0.583 | 1e-151 | |
| P49101 | 513 | Calcium-dependent protein | N/A | no | 0.920 | 0.855 | 0.575 | 1e-151 | |
| P53683 | 533 | Calcium-dependent protein | yes | no | 0.918 | 0.821 | 0.578 | 1e-150 | |
| P28582 | 532 | Calcium-dependent protein | N/A | no | 0.930 | 0.834 | 0.561 | 1e-148 | |
| Q9ZSA2 | 531 | Calcium-dependent protein | no | no | 0.935 | 0.839 | 0.555 | 1e-146 | |
| O49717 | 554 | Calcium-dependent protein | no | no | 0.918 | 0.790 | 0.549 | 1e-143 | |
| Q1PFH8 | 551 | Calcium-dependent protein | no | no | 0.958 | 0.829 | 0.514 | 1e-140 | |
| Q8RWL2 | 534 | Calcium-dependent protein | no | no | 0.932 | 0.833 | 0.510 | 1e-135 | |
| Q9FMP5 | 528 | Calcium-dependent protein | no | no | 0.920 | 0.831 | 0.507 | 1e-134 |
| >sp|Q38868|CDPK9_ARATH Calcium-dependent protein kinase 9 OS=Arabidopsis thaliana GN=CPK9 PE=1 SV=1 | Back alignment and function desciption |
|---|
Score = 541 bits (1393), Expect = e-153, Method: Compositional matrix adjust.
Identities = 265/458 (57%), Positives = 342/458 (74%), Gaps = 12/458 (2%)
Query: 6 SKNQRDPILGKAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLA 65
+ + + IL A+EDV L Y G+ LGRGQFGV+YLCTENST + YACKSI+KK + A
Sbjct: 72 TTTKSNSILENAFEDVKLFYTLGKELGRGQFGVTYLCTENSTGKKYACKSISKKKLVTKA 131
Query: 66 ENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERD 125
+ D +RREIQI +LSGQPN+VEFK YEDE AV++VMELC GG+LFDRIIAKG+ +ER
Sbjct: 132 DKDDMRREIQIMQHLSGQPNIVEFKGAYEDEKAVNLVMELCAGGELFDRIIAKGHYTERA 191
Query: 126 AATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRD 185
AA+V R IVN V +CH MGV+HRDLKPENF S+D+ AL+K TDFG ++ EEG+VYRD
Sbjct: 192 AASVCRQIVNVVKICHFMGVLHRDLKPENFLLSSKDEKALIKATDFGLSVFIEEGKVYRD 251
Query: 186 IVGSGFYIAPEVLRRRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFD 245
IVGS +Y+APEVLRRRYGKE+DIWSAG+ILYILLSGVPPFWAET+KG +DAIL+G IDF+
Sbjct: 252 IVGSAYYVAPEVLRRRYGKEVDIWSAGIILYILLSGVPPFWAETEKGIFDAILEGHIDFE 311
Query: 246 TDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASD---DTSVILRMKQF 302
+ PWPSISS+AKDLVRRMLT DPKRRI+AA VL+HPWLRE GEASD D++V+ RMKQF
Sbjct: 312 SQPWPSISSSAKDLVRRMLTADPKRRISAADVLQHPWLREGGEASDKPIDSAVLSRMKQF 371
Query: 303 RRMNKLKKLTIKVIVEYLPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEF 362
R MNKLKKL +KVI E + EE Q LK F +DTD +GT++Y+EL+ GL K+GS LTE
Sbjct: 372 RAMNKLKKLALKVIAENIDTEEIQGLKAMFANIDTDNSGTITYEELKEGLAKLGSKLTEA 431
Query: 363 DVKHLMEA--VKNSSTLESLCENLPTKEKQK------LMEKFREMDTDNSDTLTLSELKA 414
+VK LM+A V + +++ + T + + L + F+ D D+S +T+ EL++
Sbjct: 432 EVKQLMDAADVDGNGSIDYIEFITATMHRHRLESNENLYKAFQHFDKDSSGYITIDELES 491
Query: 415 GLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLM 452
L + G +++ + + + D D +G I+ EF +M
Sbjct: 492 ALKEYGMG-DDATIKEVLSDVDSDNDGRINYEEFCAMM 528
|
May play a role in signal transduction pathways that involve calcium as a second messenger. Arabidopsis thaliana (taxid: 3702) EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1 |
| >sp|Q9C6P3|CDPKX_ARATH Calcium-dependent protein kinase 33 OS=Arabidopsis thaliana GN=CPK33 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 534 bits (1376), Expect = e-151, Method: Compositional matrix adjust.
Identities = 263/451 (58%), Positives = 338/451 (74%), Gaps = 12/451 (2%)
Query: 13 ILGKAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRR 72
IL K YEDV L Y + LGRGQFGV+YLCTE ST + +ACKSI+KK + + + +RR
Sbjct: 61 ILEKPYEDVKLFYTLSKELGRGQFGVTYLCTEKSTGKRFACKSISKKKLVTKGDKEDMRR 120
Query: 73 EIQIRLYLSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRA 132
EIQI +LSGQPN+VEFK YEDE AV++VMELC GG+LFDRI+AKG+ SER AA+V R
Sbjct: 121 EIQIMQHLSGQPNIVEFKGAYEDEKAVNLVMELCAGGELFDRILAKGHYSERAAASVCRQ 180
Query: 133 IVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFY 192
IVN VN+CH MGVMHRDLKPENF S+D+ AL+K TDFG ++ EEG+VY+DIVGS +Y
Sbjct: 181 IVNVVNICHFMGVMHRDLKPENFLLSSKDEKALIKATDFGLSVFIEEGRVYKDIVGSAYY 240
Query: 193 IAPEVLRRRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSI 252
+APEVL+RRYGKEIDIWSAG+ILYILLSGVPPFWAET+KG +DAIL+GEIDF++ PWPSI
Sbjct: 241 VAPEVLKRRYGKEIDIWSAGIILYILLSGVPPFWAETEKGIFDAILEGEIDFESQPWPSI 300
Query: 253 SSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASD---DTSVILRMKQFRRMNKLK 309
S++AKDLVRRMLT+DPKRRI+AA+VL+HPWLRE GEASD D++V+ RMKQFR MNKLK
Sbjct: 301 SNSAKDLVRRMLTQDPKRRISAAEVLKHPWLREGGEASDKPIDSAVLSRMKQFRAMNKLK 360
Query: 310 KLTIKVIVEYLPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLME 369
KL +KVI E + EE Q LK F +DTD +GT++Y+EL+ GL K+GS LTE +VK LM+
Sbjct: 361 KLALKVIAENIDTEEIQGLKAMFANIDTDNSGTITYEELKEGLAKLGSRLTEAEVKQLMD 420
Query: 370 A--VKNSSTLESLCENLPTKEKQKL------MEKFREMDTDNSDTLTLSELKAGLAKLGS 421
A V + +++ + T + +L + F+ D D S +T EL+A L + G
Sbjct: 421 AADVDGNGSIDYIEFITATMHRHRLESNENVYKAFQHFDKDGSGYITTDELEAALKEYGM 480
Query: 422 ALEESEVNQYMEAGDIDGNGNIDSIEFVNLM 452
+++ + + + D D +G I+ EF +M
Sbjct: 481 G-DDATIKEILSDVDADNDGRINYDEFCAMM 510
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May play a role in signal transduction pathways that involve calcium as a second messenger. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|P49101|CDPK2_MAIZE Calcium-dependent protein kinase 2 OS=Zea mays GN=CPK2 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 534 bits (1376), Expect = e-151, Method: Compositional matrix adjust.
Identities = 262/455 (57%), Positives = 341/455 (74%), Gaps = 16/455 (3%)
Query: 11 DPILGKAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMI 70
D ILGK YEDV Y FG+ LGRGQFGV+YLCTE ++ R YACKSI+K+ + A+ + I
Sbjct: 51 DTILGKQYEDVRSVYSFGKELGRGQFGVTYLCTEIASGRQYACKSISKRKLVSKADREDI 110
Query: 71 RREIQIRLYLSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVL 130
RREIQI +LSGQPN+VEF+ YED++ VHVVMELC GG+LFDRIIAKG+ +ER AAT+
Sbjct: 111 RREIQIMQHLSGQPNIVEFRGAYEDKSNVHVVMELCAGGELFDRIIAKGHYTERAAATIC 170
Query: 131 RAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSG 190
RA+VN VN+CH MGVMHRDLKPENF + ++NA+LK TDFG ++ EEG++YRDIVGS
Sbjct: 171 RAVVNVVNICHFMGVMHRDLKPENFLLATMEENAMLKATDFGLSVFIEEGKMYRDIVGSA 230
Query: 191 FYIAPEVLRRRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWP 250
+Y+APEVLRR YGKEID+WSAGVILYILLSGVPPFWAE +KG +DAIL EIDF++ PWP
Sbjct: 231 YYVAPEVLRRSYGKEIDVWSAGVILYILLSGVPPFWAEIEKGIFDAILHEEIDFESQPWP 290
Query: 251 SISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASD---DTSVILRMKQFRRMNK 307
SIS +AKDLVR+MLT+DPK+R+T+AQVL+H WLRE GEASD D++V+ RMKQFR MNK
Sbjct: 291 SISESAKDLVRKMLTRDPKKRLTSAQVLQHQWLREGGEASDKPIDSAVLSRMKQFRAMNK 350
Query: 308 LKKLTIKVIVEYLPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHL 367
LKK+ +KVI L +EE + LK+ F+ MDTD +GT++Y+EL+AGL K+GS L+E +VK L
Sbjct: 351 LKKMALKVIASNLNEEEIKGLKQMFMNMDTDNSGTITYEELKAGLAKLGSKLSEAEVKQL 410
Query: 368 MEA--VKNSSTLESLCENLPTKEKQK------LMEKFREMDTDNSDTLTLSELKAGL--A 417
MEA V + +++ + T + K L + F+ D DNS +T EL++ L
Sbjct: 411 MEAADVDGNGSIDYVEFITATMHRHKLERDEHLFKAFQYFDKDNSGFITRDELESALIEH 470
Query: 418 KLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLM 452
++G + S + + + D D +G I+ EF +M
Sbjct: 471 EMG---DTSTIREIISEVDTDNDGRINYEEFCAMM 502
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May play a role in signal transduction pathways that involve calcium as a second messenger. Zea mays (taxid: 4577) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|P53683|CDPK2_ORYSJ Calcium-dependent protein kinase isoform 2 OS=Oryza sativa subsp. japonica GN=CPK2 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 530 bits (1365), Expect = e-150, Method: Compositional matrix adjust.
Identities = 263/455 (57%), Positives = 342/455 (75%), Gaps = 17/455 (3%)
Query: 11 DPILGKAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMI 70
D ILGK Y+DV Y G+ LGRGQFGV+YLCTE ++ + YACKSI+K+ + A+ + I
Sbjct: 71 DTILGKPYDDVRSVYSLGKELGRGQFGVTYLCTEIASGKQYACKSISKRKLVSKADKEDI 130
Query: 71 RREIQIRLYLSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVL 130
RREIQI +LSGQ N+VEF+ YED++ VHVVMELC GG+LFDRIIAKG+ SER AAT+
Sbjct: 131 RREIQIMQHLSGQQNIVEFRGAYEDKSNVHVVMELCAGGELFDRIIAKGHYSERAAATIC 190
Query: 131 RAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSG 190
RA+VN VN+CH MGVMHRDLKPENF ++++NA+LK TDFG ++ EEG++YRDIVGS
Sbjct: 191 RAVVNVVNICHFMGVMHRDLKPENFLLATKEENAMLKATDFGLSVFIEEGKMYRDIVGSA 250
Query: 191 FYIAPEVLRRRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWP 250
+Y+APEVLRR YGKEID+WSAGVILYILLSGVPPFWAET+KG +DAILQGEIDF++ PWP
Sbjct: 251 YYVAPEVLRRNYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILQGEIDFESQPWP 310
Query: 251 SISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASD---DTSVILRMKQFRRMNK 307
SIS +AKDLVR+MLT+DPK+RIT+AQVL+HPWLR+ GEASD D++V+ RMKQFR MNK
Sbjct: 311 SISESAKDLVRKMLTQDPKKRITSAQVLQHPWLRD-GEASDKPIDSAVLSRMKQFRAMNK 369
Query: 308 LKKLTIKVIVEYLPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHL 367
LKK+ +KVI L +EE + LK+ F MDTD +GT++Y+EL+AGL K+GS L+E +VK L
Sbjct: 370 LKKMALKVIASNLNEEEIKGLKQMFTNMDTDNSGTITYEELKAGLAKLGSKLSEAEVKQL 429
Query: 368 MEA--VKNSSTLESLCENLPTKEKQK------LMEKFREMDTDNSDTLTLSELKAGL--A 417
MEA V + +++ + T + K L + F+ D DNS +T EL++ L
Sbjct: 430 MEAADVDGNGSIDYVEFITATMHRHKLERDEHLFKAFQYFDKDNSGFITRDELESALIEH 489
Query: 418 KLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLM 452
++G + S + + D D +G I+ EF +M
Sbjct: 490 EMG---DTSTIKDIISEVDTDNDGRINYEEFCAMM 521
|
May play a role in signal transduction pathways that involve calcium as a second messenger. Oryza sativa subsp. japonica (taxid: 39947) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|P28582|CDPK_DAUCA Calcium-dependent protein kinase OS=Daucus carota PE=2 SV=2 | Back alignment and function description |
|---|
Score = 524 bits (1350), Expect = e-148, Method: Compositional matrix adjust.
Identities = 255/454 (56%), Positives = 338/454 (74%), Gaps = 10/454 (2%)
Query: 5 VSKNQRDPILGKAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRL 64
V + + + ILGK +ED+ Y G+ LGRGQFG Y CTENS+ + YACKSI K+ +
Sbjct: 61 VHRPESNTILGKPFEDIRGKYTLGKELGRGQFGCVYQCTENSSGQLYACKSILKRKLVSK 120
Query: 65 AENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSER 124
+ + I+REIQI +LSGQPN+VEFK +ED +VH+VMELC GG+LFDRIIA+G+ SER
Sbjct: 121 NDKEDIKREIQILQHLSGQPNIVEFKGVFEDRQSVHLVMELCAGGELFDRIIAQGHYSER 180
Query: 125 DAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYR 184
AAT+ R IVN V+VCH MGVMHRDLKPENF S+D +A+LK TDFG ++ EEG+VYR
Sbjct: 181 AAATICRQIVNVVHVCHFMGVMHRDLKPENFLLSSKDKDAMLKATDFGLSVFIEEGKVYR 240
Query: 185 DIVGSGFYIAPEVLRRRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDF 244
+IVGS +Y+APEVLRR YGKEIDIWSAGVILYILLSGVPPFWAE +KG +DAIL+G IDF
Sbjct: 241 NIVGSAYYVAPEVLRRSYGKEIDIWSAGVILYILLSGVPPFWAENEKGIFDAILEGVIDF 300
Query: 245 DTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASD---DTSVILRMKQ 301
+++PWPS+S++AKDLVR+MLT+DP+RRIT+AQVL+HPW+RE GEASD D++V+ RMKQ
Sbjct: 301 ESEPWPSVSNSAKDLVRKMLTQDPRRRITSAQVLDHPWMREGGEASDKPIDSAVLSRMKQ 360
Query: 302 FRRMNKLKKLTIKVIVEYLPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTE 361
FR MNKLK+L +KVI E L +EE + LK F MDTDK+GT++Y+EL++GL ++GS L+E
Sbjct: 361 FRAMNKLKQLALKVIAESLSEEEIKGLKSMFANMDTDKSGTITYEELKSGLARLGSKLSE 420
Query: 362 FDVKHLMEA--VKNSSTLESLCENLPTKEKQKL----MEKFREMDTDNSDTLTLSELKAG 415
+V+ LM+A V + T++ L T + KL + F+ D DNS +T EL++
Sbjct: 421 VEVQQLMDAADVDGNGTIDYLEFITATMHRHKLESYEHQAFQYFDKDNSGFITKDELESA 480
Query: 416 LAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFV 449
+ + G +E+ + + D D +G I+ EF
Sbjct: 481 MKEYGMG-DEATIKDIISEVDSDNDGRINYDEFC 513
|
May play a role in signal transduction pathways that involve calcium as a second messenger. Daucus carota (taxid: 4039) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q9ZSA2|CDPKL_ARATH Calcium-dependent protein kinase 21 OS=Arabidopsis thaliana GN=CPK21 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 518 bits (1333), Expect = e-146, Method: Compositional matrix adjust.
Identities = 255/459 (55%), Positives = 334/459 (72%), Gaps = 13/459 (2%)
Query: 5 VSKNQRDPILGKAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRL 64
VS D ILGK +ED+ Y G+ LGRGQFG++Y+C E T YACKSI K+ +
Sbjct: 60 VSVRDPDTILGKPFEDIRKFYSLGKELGRGQFGITYMCKEIGTGNTYACKSILKRKLISK 119
Query: 65 AENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSER 124
+ + ++REIQI YLSGQPN+VE K YED ++H+VMELC GG+LFDRIIA+G+ SER
Sbjct: 120 QDKEDVKREIQIMQYLSGQPNIVEIKGAYEDRQSIHLVMELCAGGELFDRIIAQGHYSER 179
Query: 125 DAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYR 184
AA ++R+IVN V +CH MGV+HRDLKPENF S+++NA+LK TDFG ++ EEG+VYR
Sbjct: 180 AAAGIIRSIVNVVQICHFMGVVHRDLKPENFLLSSKEENAMLKATDFGLSVFIEEGKVYR 239
Query: 185 DIVGSGFYIAPEVLRRRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDF 244
DIVGS +Y+APEVLRR YGKEIDIWSAGVILYILLSGVPPFWAE +KG +D +++GEIDF
Sbjct: 240 DIVGSAYYVAPEVLRRSYGKEIDIWSAGVILYILLSGVPPFWAENEKGIFDEVIKGEIDF 299
Query: 245 DTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASD---DTSVILRMKQ 301
++PWPSIS +AKDLVR+MLTKDPKRRITAAQVLEHPW++ GEA D D++V+ RMKQ
Sbjct: 300 VSEPWPSISESAKDLVRKMLTKDPKRRITAAQVLEHPWIK-GGEAPDKPIDSAVLSRMKQ 358
Query: 302 FRRMNKLKKLTIKVIVEYLPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTE 361
FR MNKLKKL +KVI E L +EE + LK F +DTDK+GT++Y+EL+ GLT++GS L+E
Sbjct: 359 FRAMNKLKKLALKVIAESLSEEEIKGLKTMFANIDTDKSGTITYEELKTGLTRLGSRLSE 418
Query: 362 FDVKHLMEA--VKNSSTLESLCENLPTKEKQKL------MEKFREMDTDNSDTLTLSELK 413
+VK LMEA V + T++ T + KL + F+ D DNS +T EL+
Sbjct: 419 TEVKQLMEAADVDGNGTIDYYEFISATMHRYKLDRDEHVYKAFQHFDKDNSGHITRDELE 478
Query: 414 AGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLM 452
+ + + G +E+ + + + D D +G I+ EF +M
Sbjct: 479 SAMKEYGMG-DEASIKEVISEVDTDNDGRINFEEFCAMM 516
|
May play a role in signal transduction pathways that involve calcium as a second messenger. Mediates the phosphorylation and activation of the S-type anion efflux channel SLAC1. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|O49717|CDPKF_ARATH Calcium-dependent protein kinase 15 OS=Arabidopsis thaliana GN=CPK15 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 509 bits (1311), Expect = e-143, Method: Compositional matrix adjust.
Identities = 248/451 (54%), Positives = 329/451 (72%), Gaps = 13/451 (2%)
Query: 13 ILGKAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRR 72
ILGK +E++ Y G+ LGRGQFG++Y C ENST YACKSI K+ R + D ++R
Sbjct: 90 ILGKPFEEIRKLYTLGKELGRGQFGITYTCKENSTGNTYACKSILKRKLTRKQDIDDVKR 149
Query: 73 EIQIRLYLSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRA 132
EIQI YLSGQ N+VE K YED ++H+VMELC G +LFDRIIA+G+ SE+ AA V+R+
Sbjct: 150 EIQIMQYLSGQENIVEIKGAYEDRQSIHLVMELCGGSELFDRIIAQGHYSEKAAAGVIRS 209
Query: 133 IVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFY 192
++N V +CH MGV+HRDLKPENF S D+NA+LK TDFG ++ EEG+VYRDIVGS +Y
Sbjct: 210 VLNVVQICHFMGVIHRDLKPENFLLASTDENAMLKATDFGLSVFIEEGKVYRDIVGSAYY 269
Query: 193 IAPEVLRRRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSI 252
+APEVLRR YGKEIDIWSAG+ILYILL GVPPFW+ET+KG ++ I++GEIDFD+ PWPSI
Sbjct: 270 VAPEVLRRSYGKEIDIWSAGIILYILLCGVPPFWSETEKGIFNEIIKGEIDFDSQPWPSI 329
Query: 253 SSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASD---DTSVILRMKQFRRMNKLK 309
S +AKDLVR++LTKDPK+RI+AAQ LEHPW+R GEA D D++V+ RMKQFR MNKLK
Sbjct: 330 SESAKDLVRKLLTKDPKQRISAAQALEHPWIR-GGEAPDKPIDSAVLSRMKQFRAMNKLK 388
Query: 310 KLTIKVIVEYLPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLME 369
KL +KVI E L +EE + LK F MDTDK+GT++Y+EL+ GL K+GS LTE +VK LME
Sbjct: 389 KLALKVIAESLSEEEIKGLKTMFANMDTDKSGTITYEELKNGLAKLGSKLTEAEVKQLME 448
Query: 370 A--VKNSSTLESLCENLPTKEK------QKLMEKFREMDTDNSDTLTLSELKAGLAKLGS 421
A V + T++ + T + + + + F+ D DNS +T+ EL++ + + G
Sbjct: 449 AADVDGNGTIDYIEFISATMHRYRFDRDEHVFKAFQYFDKDNSGFITMDELESAMKEYGM 508
Query: 422 ALEESEVNQYMEAGDIDGNGNIDSIEFVNLM 452
+E+ + + + D D +G I+ EF +M
Sbjct: 509 G-DEASIKEVIAEVDTDNDGRINYEEFCAMM 538
|
May play a role in signal transduction pathways that involve calcium as a second messenger. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q1PFH8|CDPKJ_ARATH Calcium-dependent protein kinase 19 OS=Arabidopsis thaliana GN=CPK19 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 498 bits (1282), Expect = e-140, Method: Compositional matrix adjust.
Identities = 242/470 (51%), Positives = 331/470 (70%), Gaps = 13/470 (2%)
Query: 8 NQRDPILGKAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAEN 67
Q +PILG+ +ED+ Y GR LGRGQFG++Y+CTE S+ + +ACKSI K+ +R +
Sbjct: 81 QQPEPILGRPFEDIKEKYSLGRELGRGQFGITYICTEISSGKNFACKSILKRKLIRTKDR 140
Query: 68 DMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAA 127
+ +RREIQI YLSGQPN+VE K YED +VH+VMELCEGG+LFD+I +G+ SE+ AA
Sbjct: 141 EDVRREIQIMHYLSGQPNIVEIKGAYEDRQSVHLVMELCEGGELFDKITKRGHYSEKAAA 200
Query: 128 TVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDD-NALLKVTDFGSALLFEEGQVYRDI 186
++R++V V +CH MGV+HRDLKPENF S+D+ +++LK TDFG ++ EEG+VY DI
Sbjct: 201 EIIRSVVKVVQICHFMGVIHRDLKPENFLLSSKDEASSMLKATDFGVSVFIEEGKVYEDI 260
Query: 187 VGSGFYIAPEVLRRRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDT 246
VGS +Y+APEVL+R YGK IDIWSAGVILYILL G PPFWAET KG ++ IL+GEIDF++
Sbjct: 261 VGSAYYVAPEVLKRNYGKAIDIWSAGVILYILLCGNPPFWAETDKGIFEEILRGEIDFES 320
Query: 247 DPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASD---DTSVILRMKQFR 303
+PWPSIS +AKDLVR ML DPK+R TAAQVLEHPW+RE GEASD D++V+ RMKQ R
Sbjct: 321 EPWPSISESAKDLVRNMLKYDPKKRFTAAQVLEHPWIREGGEASDKPIDSAVLSRMKQLR 380
Query: 304 RMNKLKKLTIKVIVEYLPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFD 363
MNKLKKL K I + L +EE + LK F MDTDK+GT++YDEL++GL K+GS LTE +
Sbjct: 381 AMNKLKKLAFKFIAQNLKEEELKGLKTMFANMDTDKSGTITYDELKSGLEKLGSRLTETE 440
Query: 364 VKHLME--AVKNSSTLE------SLCENLPTKEKQKLMEKFREMDTDNSDTLTLSELKAG 415
VK L+E V + T++ + + + L + F+ D DNS ++ EL+
Sbjct: 441 VKQLLEDADVDGNGTIDYIEFISATMNRFRVEREDNLFKAFQHFDKDNSGFISRQELETA 500
Query: 416 LAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIYKLETPELLE 465
+ + ++ + + + D D +G+I+ EF N+M + +L++
Sbjct: 501 MKEYNMG-DDIMIKEIISEVDADNDGSINYQEFCNMMKSCSQSHQSKLVQ 549
|
May play a role in signal transduction pathways that involve calcium as a second messenger. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q8RWL2|CDPKT_ARATH Calcium-dependent protein kinase 29 OS=Arabidopsis thaliana GN=CPK29 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 481 bits (1238), Expect = e-135, Method: Compositional matrix adjust.
Identities = 234/458 (51%), Positives = 330/458 (72%), Gaps = 13/458 (2%)
Query: 6 SKNQRDPILGKAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLA 65
S +Q PIL + D+ Y + LGRGQFG++Y CT+ S R YACKSI+K+ +R
Sbjct: 66 SGSQIGPILNRPMIDLSALYDLHKELGRGQFGITYKCTDKSNGREYACKSISKRKLIRRK 125
Query: 66 ENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERD 125
+ + +RRE+ I +L+GQPN+VEF+ YED+ +H+VMELC GG+LFDRII KG SE++
Sbjct: 126 DIEDVRREVMILQHLTGQPNIVEFRGAYEDKDNLHLVMELCSGGELFDRIIKKGSYSEKE 185
Query: 126 AATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRD 185
AA + R IVN V+VCH MGV+HRDLKPENF +S ++++ +K TDFG ++ EEG+VYRD
Sbjct: 186 AANIFRQIVNVVHVCHFMGVVHRDLKPENFLLVSNEEDSPIKATDFGLSVFIEEGKVYRD 245
Query: 186 IVGSGFYIAPEVLRRRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFD 245
IVGS +Y+APEVL R YGKEID+WSAGV+LYILLSGVPPFW ET+K ++AIL+G++D +
Sbjct: 246 IVGSAYYVAPEVLHRNYGKEIDVWSAGVMLYILLSGVPPFWGETEKTIFEAILEGKLDLE 305
Query: 246 TDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASD---DTSVILRMKQF 302
T PWP+IS +AKDL+R+ML +DPK+RITAA+ LEHPW+ ++ + SD +++V++RMKQF
Sbjct: 306 TSPWPTISESAKDLIRKMLIRDPKKRITAAEALEHPWMTDT-KISDKPINSAVLVRMKQF 364
Query: 303 RRMNKLKKLTIKVIVEYLPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEF 362
R MNKLKKL +KVI E L +EE + LK+ F MDTD++GT+++DELR GL ++GS LTE
Sbjct: 365 RAMNKLKKLALKVIAENLSEEEIKGLKQTFKNMDTDESGTITFDELRNGLHRLGSKLTES 424
Query: 363 DVKHLMEA--VKNSSTLESLCENLPTKEKQK------LMEKFREMDTDNSDTLTLSELKA 414
++K LMEA V S T++ + T + + L+E F+ D D S +T ELK
Sbjct: 425 EIKQLMEAADVDKSGTIDYIEFVTATMHRHRLEKEENLIEAFKYFDKDRSGFITRDELKH 484
Query: 415 GLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLM 452
+ + G +++ +++ + D D +G I+ EFV +M
Sbjct: 485 SMTEYGMG-DDATIDEVINDVDTDNDGRINYEEFVAMM 521
|
May play a role in signal transduction pathways that involve calcium as a second messenger. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q9FMP5|CDPKH_ARATH Calcium-dependent protein kinase 17 OS=Arabidopsis thaliana GN=CPK17 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 479 bits (1232), Expect = e-134, Method: Compositional matrix adjust.
Identities = 230/453 (50%), Positives = 323/453 (71%), Gaps = 14/453 (3%)
Query: 12 PILGKAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIR 71
P+LG+ EDV Y G+ LGRGQFGV++LCT+ +T +ACK+IAK+ + + + +R
Sbjct: 60 PVLGRPMEDVKASYSLGKELGRGQFGVTHLCTQKATGHQFACKTIAKRKLVNKEDIEDVR 119
Query: 72 REIQIRLYLSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLR 131
RE+QI +L+GQPN+VE K YED+ +VH+VMELC GG+LFDRIIAKG+ SER AA++LR
Sbjct: 120 REVQIMHHLTGQPNIVELKGAYEDKHSVHLVMELCAGGELFDRIIAKGHYSERAAASLLR 179
Query: 132 AIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGF 191
IV V+ CHSMGV+HRDLKPENF +++D+N+ LK TDFG ++ ++ G+V++DIVGS +
Sbjct: 180 TIVQIVHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKPGEVFKDIVGSAY 239
Query: 192 YIAPEVLRRRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPS 251
YIAPEVL+R+YG E DIWS GV+LYILL GVPPFWAE++ G ++AIL+G +DF +DPWPS
Sbjct: 240 YIAPEVLKRKYGPEADIWSIGVMLYILLCGVPPFWAESENGIFNAILRGHVDFSSDPWPS 299
Query: 252 ISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASD---DTSVILRMKQFRRMNKL 308
IS AKDLV++ML DPK+R+TAAQVL HPW++E GEA D D +V+ R+KQF+ MN
Sbjct: 300 ISPQAKDLVKKMLNSDPKQRLTAAQVLNHPWIKEDGEAPDVPLDNAVMSRLKQFKAMNNF 359
Query: 309 KKLTIKVIVEYLPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLM 368
KK+ ++VI L +EE LKE F MDTD +GT++ +ELR GL K G+ L+E++V+ LM
Sbjct: 360 KKVALRVIAGCLSEEEIMGLKEMFKGMDTDSSGTITLEELRQGLAKQGTRLSEYEVQQLM 419
Query: 369 EA--VKNSSTLE-------SLCENLPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKL 419
EA + T++ ++ N +E+ L F+ D DNS +T+ EL+ L +
Sbjct: 420 EAADADGNGTIDYGEFIAATMHINRLDREEH-LYSAFQHFDKDNSGYITMEELEQALREF 478
Query: 420 GSALEESEVNQYMEAGDIDGNGNIDSIEFVNLM 452
G + ++ + + D D +G I+ EFV +M
Sbjct: 479 GMN-DGRDIKEIISEVDGDNDGRINYDEFVAMM 510
|
May play a role in signal transduction pathways that involve calcium as a second messenger. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 477 | ||||||
| 225460973 | 536 | PREDICTED: calcium-dependent protein kin | 0.930 | 0.828 | 0.598 | 1e-154 | |
| 4336426 | 534 | Ca2+-dependent protein kinase [Mesembrya | 0.930 | 0.831 | 0.592 | 1e-153 | |
| 449470453 | 519 | PREDICTED: calcium-dependent protein kin | 0.924 | 0.849 | 0.578 | 1e-152 | |
| 15231140 | 541 | calmodulin-domain protein kinase 9 [Arab | 0.935 | 0.824 | 0.578 | 1e-151 | |
| 297830722 | 541 | calmodulin-domain protein kinase 9 [Arab | 0.935 | 0.824 | 0.576 | 1e-151 | |
| 297847416 | 521 | calcium-dependent protein kinase 33 [Ara | 0.920 | 0.842 | 0.585 | 1e-150 | |
| 90820097 | 532 | calcium-dependent protein kinase [Tritic | 0.928 | 0.832 | 0.584 | 1e-149 | |
| 326503036 | 532 | predicted protein [Hordeum vulgare subsp | 0.928 | 0.832 | 0.584 | 1e-149 | |
| 255583607 | 533 | calcium-dependent protein kinase, putati | 0.926 | 0.829 | 0.572 | 1e-149 | |
| 84626055 | 532 | calcium-dependent protein kinase [Tritic | 0.928 | 0.832 | 0.584 | 1e-149 |
| >gi|225460973|ref|XP_002278179.1| PREDICTED: calcium-dependent protein kinase 9-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 552 bits (1422), Expect = e-154, Method: Compositional matrix adjust.
Identities = 273/456 (59%), Positives = 346/456 (75%), Gaps = 12/456 (2%)
Query: 8 NQRDPILGKAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAEN 67
++ D ILGK++EDV LHY G+ LGRGQFGV+YLCTENST YACKSI+K+ + +
Sbjct: 71 HRPDTILGKSFEDVKLHYTIGKELGRGQFGVTYLCTENSTGLQYACKSISKRKLVTKNDK 130
Query: 68 DMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAA 127
+ IRREIQI LSGQPN+VEFK YED +VH+VMELC GG+LFDRIIAKG+ SER AA
Sbjct: 131 EDIRREIQIMQDLSGQPNIVEFKGAYEDRLSVHLVMELCAGGELFDRIIAKGHYSERAAA 190
Query: 128 TVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIV 187
++ RAIVN V++CH MGVMHRDLKPENF S+ +NALLK TDFG ++ EEG+VYRDIV
Sbjct: 191 SICRAIVNVVHICHFMGVMHRDLKPENFLLSSKGENALLKATDFGLSVFIEEGKVYRDIV 250
Query: 188 GSGFYIAPEVLRRRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTD 247
GS +Y+APEVLRRRYGKEIDIWSAGVILYILLSGVPPFWAET+KG +DAILQG IDF+T
Sbjct: 251 GSAYYVAPEVLRRRYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGHIDFETS 310
Query: 248 PWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASD---DTSVILRMKQFRR 304
PWPSISS+AKDLVR+MLT+DP++RIT+AQVLEHPW++E GEASD D++V+ RMKQFR
Sbjct: 311 PWPSISSSAKDLVRKMLTQDPQKRITSAQVLEHPWIKEDGEASDKPIDSAVLSRMKQFRA 370
Query: 305 MNKLKKLTIKVIVEYLPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDV 364
MNKLKKL +KVI E L +EE Q LK F MDTDK+GT++Y+EL++GL ++GS LTE +V
Sbjct: 371 MNKLKKLALKVIAENLSEEEIQGLKAMFTNMDTDKSGTITYEELKSGLARLGSKLTEAEV 430
Query: 365 KHLMEA--VKNSSTLESLCENLPTKEKQK------LMEKFREMDTDNSDTLTLSELKAGL 416
+ LMEA V + T++ + T + K L + F+ D D+S +T ELKA +
Sbjct: 431 QQLMEAADVDGNGTIDYIEFITATVNRHKLERDEHLFKAFQYFDKDSSGFITRDELKAAM 490
Query: 417 AKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLM 452
+ G ++ + + + D D + I+ EF ++M
Sbjct: 491 KEHGMG-DDDTIAEIISEVDTDNDDKINYGEFCSMM 525
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|4336426|gb|AAD17800.1| Ca2+-dependent protein kinase [Mesembryanthemum crystallinum] | Back alignment and taxonomy information |
|---|
Score = 549 bits (1414), Expect = e-153, Method: Compositional matrix adjust.
Identities = 271/457 (59%), Positives = 346/457 (75%), Gaps = 13/457 (2%)
Query: 7 KNQRDPILGKAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAE 66
K + + ILGK +EDV ++Y GR LGRGQFGV+YLCT+ T + YACKSI+KK + A+
Sbjct: 68 KVEPNTILGKPFEDVKVYYTLGRELGRGQFGVTYLCTDKKTGQQYACKSISKKKLVTKAD 127
Query: 67 NDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDA 126
D +RREIQI ++SGQPN+VEFK YED+T+V++VMELC GG+LFDRIIAKG+ SE+ A
Sbjct: 128 KDDMRREIQIMQHMSGQPNIVEFKGAYEDKTSVNLVMELCAGGELFDRIIAKGHYSEKAA 187
Query: 127 ATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDI 186
AT+LR IVN V+VCH MGVMHRDLKPENF S+D+N+LLK TDFG ++ EEG+VYRDI
Sbjct: 188 ATMLRQIVNVVHVCHFMGVMHRDLKPENFLLSSKDENSLLKATDFGLSVFIEEGKVYRDI 247
Query: 187 VGSGFYIAPEVLRRRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDT 246
VGS +Y+APEVLRRRYGKEID+WSAGV+LYILLSGVPPFWAET+KG +DAILQG IDF++
Sbjct: 248 VGSAYYVAPEVLRRRYGKEIDVWSAGVMLYILLSGVPPFWAETEKGIFDAILQGHIDFES 307
Query: 247 DPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASD---DTSVILRMKQFR 303
PWPSIS+ AKDLVR+MLT+DPK+RITAAQVLEHPWLR+ GEASD D++V+LRMKQFR
Sbjct: 308 KPWPSISNGAKDLVRKMLTQDPKKRITAAQVLEHPWLRD-GEASDKPIDSAVLLRMKQFR 366
Query: 304 RMNKLKKLTIKVIVEYLPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFD 363
MNKLKKL +KVI E LPDEE Q LK+ F MDTD +G+++Y+ELR GL ++GS LTE +
Sbjct: 367 VMNKLKKLALKVIAENLPDEEIQGLKQMFANMDTDGSGSITYEELREGLARLGSKLTETE 426
Query: 364 VKHLMEAVKNSST--------LESLCENLPTKEKQKLMEKFREMDTDNSDTLTLSELKAG 415
VK LMEA + + + + + L + F+ D DNS +T EL+
Sbjct: 427 VKALMEAADQDGSGSIDYYEFITATMHRYRLERDEHLYKAFQYFDKDNSGFITTDELETA 486
Query: 416 LAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLM 452
+ + G A +E+ + + + D D +G I+ EF +M
Sbjct: 487 MKEYGIA-DENCIAEILLEVDTDNDGRINYDEFSAMM 522
|
Source: Mesembryanthemum crystallinum Species: Mesembryanthemum crystallinum Genus: Mesembryanthemum Family: Aizoaceae Order: Caryophyllales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449470453|ref|XP_004152931.1| PREDICTED: calcium-dependent protein kinase-like [Cucumis sativus] gi|449532030|ref|XP_004172987.1| PREDICTED: calcium-dependent protein kinase-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 546 bits (1406), Expect = e-152, Method: Compositional matrix adjust.
Identities = 262/453 (57%), Positives = 341/453 (75%), Gaps = 12/453 (2%)
Query: 11 DPILGKAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMI 70
D ILGK EDV LHY G+ LGRGQFGV+YLCTENS+ + YACKSI K+ + + + I
Sbjct: 58 DTILGKPLEDVKLHYTIGKELGRGQFGVTYLCTENSSGKQYACKSILKRKLVTKNDKEDI 117
Query: 71 RREIQIRLYLSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVL 130
RREI I +LSGQPN+VEFK YED+ +VH++MELC GG+LFDRIIAKG+ SE+ AA++
Sbjct: 118 RREIHIMQHLSGQPNIVEFKGAYEDKLSVHLIMELCAGGELFDRIIAKGHYSEKAAASIC 177
Query: 131 RAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSG 190
R+IVN V++CH MGVMHRDLKPENF S++++A+LK TDFG ++ EEG+VYRDIVGS
Sbjct: 178 RSIVNVVHICHFMGVMHRDLKPENFLLASKEEDAMLKATDFGLSVFIEEGKVYRDIVGSA 237
Query: 191 FYIAPEVLRRRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWP 250
+Y+APEVLRR+YGKEID+WSAGV+LYILLSGVPPFWAET+KG +D+ILQG IDF++DPWP
Sbjct: 238 YYVAPEVLRRKYGKEIDVWSAGVMLYILLSGVPPFWAETEKGIFDSILQGHIDFESDPWP 297
Query: 251 SISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASD---DTSVILRMKQFRRMNK 307
IS +AKDLV+RMLT+DP RIT+AQVLEHPW+RE GEASD D++V R+KQFR MNK
Sbjct: 298 HISPSAKDLVKRMLTQDPANRITSAQVLEHPWMREGGEASDKPIDSAVFTRLKQFRAMNK 357
Query: 308 LKKLTIKVIVEYLPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHL 367
LKKL +KVI E L +EE Q LK F MDTDK+GT++Y EL++GL ++GS L+E +VK L
Sbjct: 358 LKKLALKVIAENLSEEEIQGLKAMFTNMDTDKSGTITYAELKSGLARLGSTLSEAEVKQL 417
Query: 368 MEA--VKNSSTLE------SLCENLPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKL 419
MEA V + T++ + ++++ L + F+ D DNS +T ELKA +
Sbjct: 418 MEAADVDGNGTIDYIEFITATMHRYKLEKEEHLYKAFQHFDKDNSGYITRDELKAAMKDY 477
Query: 420 GSALEESEVNQYMEAGDIDGNGNIDSIEFVNLM 452
G EE+ + + + D D +G I+ EF ++M
Sbjct: 478 GMGDEET-IREIISEVDADNDGRINYDEFCSMM 509
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|15231140|ref|NP_188676.1| calmodulin-domain protein kinase 9 [Arabidopsis thaliana] gi|75319414|sp|Q38868.1|CDPK9_ARATH RecName: Full=Calcium-dependent protein kinase 9; AltName: Full=Calmodulin-domain protein kinase CDPK isoform 9 gi|1399265|gb|AAB03242.1| calmodulin-domain protein kinase CDPK isoform 9 [Arabidopsis thaliana] gi|9294561|dbj|BAB02824.1| calmodulin-domain protein kinase CDPK isoform 9 [Arabidopsis thaliana] gi|21539465|gb|AAM53285.1| calmodulin-domain protein kinase CDPK isoform 9 [Arabidopsis thaliana] gi|31711962|gb|AAP68337.1| At3g20410 [Arabidopsis thaliana] gi|332642854|gb|AEE76375.1| calmodulin-domain protein kinase 9 [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 541 bits (1393), Expect = e-151, Method: Compositional matrix adjust.
Identities = 265/458 (57%), Positives = 342/458 (74%), Gaps = 12/458 (2%)
Query: 6 SKNQRDPILGKAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLA 65
+ + + IL A+EDV L Y G+ LGRGQFGV+YLCTENST + YACKSI+KK + A
Sbjct: 72 TTTKSNSILENAFEDVKLFYTLGKELGRGQFGVTYLCTENSTGKKYACKSISKKKLVTKA 131
Query: 66 ENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERD 125
+ D +RREIQI +LSGQPN+VEFK YEDE AV++VMELC GG+LFDRIIAKG+ +ER
Sbjct: 132 DKDDMRREIQIMQHLSGQPNIVEFKGAYEDEKAVNLVMELCAGGELFDRIIAKGHYTERA 191
Query: 126 AATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRD 185
AA+V R IVN V +CH MGV+HRDLKPENF S+D+ AL+K TDFG ++ EEG+VYRD
Sbjct: 192 AASVCRQIVNVVKICHFMGVLHRDLKPENFLLSSKDEKALIKATDFGLSVFIEEGKVYRD 251
Query: 186 IVGSGFYIAPEVLRRRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFD 245
IVGS +Y+APEVLRRRYGKE+DIWSAG+ILYILLSGVPPFWAET+KG +DAIL+G IDF+
Sbjct: 252 IVGSAYYVAPEVLRRRYGKEVDIWSAGIILYILLSGVPPFWAETEKGIFDAILEGHIDFE 311
Query: 246 TDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASD---DTSVILRMKQF 302
+ PWPSISS+AKDLVRRMLT DPKRRI+AA VL+HPWLRE GEASD D++V+ RMKQF
Sbjct: 312 SQPWPSISSSAKDLVRRMLTADPKRRISAADVLQHPWLREGGEASDKPIDSAVLSRMKQF 371
Query: 303 RRMNKLKKLTIKVIVEYLPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEF 362
R MNKLKKL +KVI E + EE Q LK F +DTD +GT++Y+EL+ GL K+GS LTE
Sbjct: 372 RAMNKLKKLALKVIAENIDTEEIQGLKAMFANIDTDNSGTITYEELKEGLAKLGSKLTEA 431
Query: 363 DVKHLMEA--VKNSSTLESLCENLPTKEKQK------LMEKFREMDTDNSDTLTLSELKA 414
+VK LM+A V + +++ + T + + L + F+ D D+S +T+ EL++
Sbjct: 432 EVKQLMDAADVDGNGSIDYIEFITATMHRHRLESNENLYKAFQHFDKDSSGYITIDELES 491
Query: 415 GLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLM 452
L + G +++ + + + D D +G I+ EF +M
Sbjct: 492 ALKEYGMG-DDATIKEVLSDVDSDNDGRINYEEFCAMM 528
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297830722|ref|XP_002883243.1| calmodulin-domain protein kinase 9 [Arabidopsis lyrata subsp. lyrata] gi|297329083|gb|EFH59502.1| calmodulin-domain protein kinase 9 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 540 bits (1390), Expect = e-151, Method: Compositional matrix adjust.
Identities = 264/458 (57%), Positives = 343/458 (74%), Gaps = 12/458 (2%)
Query: 6 SKNQRDPILGKAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLA 65
+ ++ + IL A+EDV L Y G+ LGRGQFGV+YLCTENST + YACKSI+KK + A
Sbjct: 72 TTSKSNSILENAFEDVKLFYTLGKELGRGQFGVTYLCTENSTGKKYACKSISKKKLVTKA 131
Query: 66 ENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERD 125
+ D +RREIQI +LSGQPN+VEFK YEDE AV++VMELC GG+LFDRIIAKG+ SER
Sbjct: 132 DKDDMRREIQIMQHLSGQPNIVEFKGAYEDEKAVNLVMELCAGGELFDRIIAKGHYSERA 191
Query: 126 AATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRD 185
AA+V R IVN V +CH MGV+HRDLKPENF S+D+ AL+K TDFG ++ EEG+VYRD
Sbjct: 192 AASVCRQIVNVVKICHFMGVLHRDLKPENFLLSSKDEKALIKATDFGLSVFIEEGKVYRD 251
Query: 186 IVGSGFYIAPEVLRRRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFD 245
IVGS +Y+APEVLRRRYGKE+DIWSAG+ILYILLSGVPPFWAET+KG +DAIL+G IDF+
Sbjct: 252 IVGSAYYVAPEVLRRRYGKEVDIWSAGIILYILLSGVPPFWAETEKGIFDAILEGHIDFE 311
Query: 246 TDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASD---DTSVILRMKQF 302
+ PWPSIS++AKDLVRRMLT DPKRRI+AA VL+HPWLRE GEASD D++V+ RMKQF
Sbjct: 312 SQPWPSISNSAKDLVRRMLTADPKRRISAADVLQHPWLREGGEASDKPIDSAVLSRMKQF 371
Query: 303 RRMNKLKKLTIKVIVEYLPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEF 362
R MNKLKKL +KVI E + EE Q LK F +DTD +G+++Y+EL+ GL K+GS LTE
Sbjct: 372 RAMNKLKKLALKVIAENIDTEEIQGLKAMFANIDTDNSGSITYEELKEGLAKLGSKLTEA 431
Query: 363 DVKHLMEA--VKNSSTLESLCENLPTKEKQK------LMEKFREMDTDNSDTLTLSELKA 414
+VK LM+A V + +++ + T + + L + F+ D D+S +T+ EL++
Sbjct: 432 EVKQLMDAADVDGNGSIDYIEFITATMHRHRLESNENLYKAFQHFDKDSSGYITIDELES 491
Query: 415 GLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLM 452
L + G +++ + + + D D +G I+ EF +M
Sbjct: 492 ALKEYGMG-DDATIKEVLSDVDSDNDGRINYEEFCAMM 528
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297847416|ref|XP_002891589.1| calcium-dependent protein kinase 33 [Arabidopsis lyrata subsp. lyrata] gi|297337431|gb|EFH67848.1| calcium-dependent protein kinase 33 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 537 bits (1383), Expect = e-150, Method: Compositional matrix adjust.
Identities = 264/451 (58%), Positives = 339/451 (75%), Gaps = 12/451 (2%)
Query: 13 ILGKAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRR 72
IL K YEDV L Y + LGRGQFGV+YLCTE ST + +ACKSI+KK + A+ + +RR
Sbjct: 61 ILEKPYEDVKLFYTLSKELGRGQFGVTYLCTEKSTRKRFACKSISKKKLVTKADKEDMRR 120
Query: 73 EIQIRLYLSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRA 132
EIQI +LSGQPN+VEFK YEDE AV++VMELC GG+LFDRI+AKG+ SER AA+V R
Sbjct: 121 EIQIMQHLSGQPNIVEFKGAYEDEKAVNLVMELCAGGELFDRILAKGHYSERAAASVCRQ 180
Query: 133 IVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFY 192
IVN VN+CH MGVMHRDLKPENF S+D+ AL+K TDFG ++ EEG+VY+DIVGS +Y
Sbjct: 181 IVNVVNICHFMGVMHRDLKPENFLLSSKDEKALIKATDFGLSVFIEEGRVYKDIVGSAYY 240
Query: 193 IAPEVLRRRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSI 252
+APEVL+RRYGKEIDIWSAG+ILYILLSGVPPFWAET+KG +DAIL+GEIDF++ PWPSI
Sbjct: 241 VAPEVLKRRYGKEIDIWSAGIILYILLSGVPPFWAETEKGIFDAILEGEIDFESQPWPSI 300
Query: 253 SSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASD---DTSVILRMKQFRRMNKLK 309
S++AKDLVRRMLT+DPKRRI+AA+VL+HPWLRE GEASD D++V+ RMKQFR MNKLK
Sbjct: 301 SNSAKDLVRRMLTQDPKRRISAAEVLQHPWLREGGEASDKPIDSAVLSRMKQFRAMNKLK 360
Query: 310 KLTIKVIVEYLPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLME 369
KL +KVI E + EE Q LK F +DTD +GT++Y+EL+ GL K+GS LTE +VK LM+
Sbjct: 361 KLALKVIAENIDTEEIQGLKAMFANIDTDNSGTITYEELKEGLAKLGSKLTEAEVKQLMD 420
Query: 370 A--VKNSSTLESLCENLPTKEKQK------LMEKFREMDTDNSDTLTLSELKAGLAKLGS 421
A V + +++ + T + + L F+ D D S +T+ EL+A L + G
Sbjct: 421 AADVDGNGSIDYIEFITATMHRHRLESNENLYRAFQHFDKDGSGYITIDELEAALKEYGM 480
Query: 422 ALEESEVNQYMEAGDIDGNGNIDSIEFVNLM 452
+++ + + + D D +G I+ EF +M
Sbjct: 481 G-DDATIKEILSDVDADNDGRINYEEFCAMM 510
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|90820097|gb|ABD98803.1| calcium-dependent protein kinase [Triticum aestivum] gi|164472652|gb|ABY59008.1| calcium-dependent protein kinase [Triticum aestivum] | Back alignment and taxonomy information |
|---|
Score = 536 bits (1380), Expect = e-149, Method: Compositional matrix adjust.
Identities = 269/460 (58%), Positives = 341/460 (74%), Gaps = 17/460 (3%)
Query: 6 SKNQRDPILGKAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLA 65
SK D ILGK YEDV Y G+ LGRGQFGV+YLCTE ST R YACKSI+K+ + A
Sbjct: 66 SKPMPDTILGKQYEDVRSVYSLGKELGRGQFGVTYLCTEISTGRQYACKSISKRKLVSKA 125
Query: 66 ENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERD 125
+ + IRREIQI +LSGQPN+VEF YED+ +VHVVMELC GG+LFDRIIAKG+ SER
Sbjct: 126 DKEDIRREIQIMQHLSGQPNIVEFCGAYEDKGSVHVVMELCAGGELFDRIIAKGHYSERA 185
Query: 126 AATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRD 185
AAT+ R +VN VNVCH MGVMHRDLKPENF ++D+NA+LK TDFG ++ EEG++YRD
Sbjct: 186 AATICRGVVNVVNVCHFMGVMHRDLKPENFLLATKDENAVLKATDFGLSVFIEEGKMYRD 245
Query: 186 IVGSGFYIAPEVLRRRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFD 245
IVGS +Y+APEVLRR YGKEID+WSAGVILYILLSGVPPFWAET+KG +DAILQGEIDF+
Sbjct: 246 IVGSAYYVAPEVLRRNYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILQGEIDFE 305
Query: 246 TDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASD---DTSVILRMKQF 302
+ PWPSIS +AKDLVR+ML +DPK+RI++AQVL+HPWLRE GEASD D++V+ RMKQF
Sbjct: 306 SQPWPSISESAKDLVRKMLAQDPKKRISSAQVLQHPWLRE-GEASDKPIDSAVLSRMKQF 364
Query: 303 RRMNKLKKLTIKVIVEYLPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEF 362
R MNKLKK+ +KVI L +EE + LK+ F+ MDTD +GT++Y+EL+AGL K+GS L+E
Sbjct: 365 RAMNKLKKMALKVIASNLNEEEIKGLKQMFMNMDTDNSGTITYEELKAGLAKLGSKLSEA 424
Query: 363 DVKHLMEA--VKNSSTLESLCENLPTKEKQK------LMEKFREMDTDNSDTLTLSELKA 414
+VK LM+A V + +++ + T + K L + F+ D DNS +T EL+
Sbjct: 425 EVKQLMDAADVDGNGSIDYVEFITATMHRHKLERDEHLFKAFQYFDKDNSGFITRDELET 484
Query: 415 GL--AKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLM 452
L ++G A + + D D +G I+ EF +M
Sbjct: 485 ALIEHEMGDA---DTIKDIISEVDTDNDGRINYEEFCAMM 521
|
Source: Triticum aestivum Species: Triticum aestivum Genus: Triticum Family: Poaceae Order: Poales Class: Liliopsida Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|326503036|dbj|BAJ99143.1| predicted protein [Hordeum vulgare subsp. vulgare] | Back alignment and taxonomy information |
|---|
Score = 536 bits (1380), Expect = e-149, Method: Compositional matrix adjust.
Identities = 269/460 (58%), Positives = 341/460 (74%), Gaps = 17/460 (3%)
Query: 6 SKNQRDPILGKAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLA 65
SK D ILGK YEDV Y G+ LGRGQFGV+YLCTE ST R YACKSI+K+ + A
Sbjct: 66 SKPTPDTILGKQYEDVRSVYSLGKELGRGQFGVTYLCTEISTGRQYACKSISKRKLVSKA 125
Query: 66 ENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERD 125
+ + IRREIQI +LSGQPN+VEF YED+ +VHVVMELC GG+LFDRIIAKG+ SER
Sbjct: 126 DKEDIRREIQIMQHLSGQPNIVEFCGAYEDKGSVHVVMELCAGGELFDRIIAKGHYSERA 185
Query: 126 AATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRD 185
AAT+ R +VN VNVCH MGVMHRDLKPENF ++D+NA+LK TDFG ++ EEG++YRD
Sbjct: 186 AATICRGVVNVVNVCHFMGVMHRDLKPENFLLATKDENAVLKATDFGLSVFIEEGKMYRD 245
Query: 186 IVGSGFYIAPEVLRRRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFD 245
IVGS +Y+APEVLRR YGKEID+WSAGVILYILLSGVPPFWAET+KG +DAILQGEIDF+
Sbjct: 246 IVGSAYYVAPEVLRRNYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILQGEIDFE 305
Query: 246 TDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASD---DTSVILRMKQF 302
+ PWPSIS +AKDLVR+ML +DPK+RI++AQVL+HPWLRE GEASD D++V+ RMKQF
Sbjct: 306 SQPWPSISESAKDLVRKMLAQDPKKRISSAQVLQHPWLRE-GEASDKPIDSAVLSRMKQF 364
Query: 303 RRMNKLKKLTIKVIVEYLPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEF 362
R MNKLKK+ +KVI L +EE + LK+ F+ MDTD +GT++Y+EL+AGL K+GS L+E
Sbjct: 365 RAMNKLKKMALKVIASNLNEEEIKGLKQMFMNMDTDNSGTITYEELKAGLAKLGSKLSEA 424
Query: 363 DVKHLMEA--VKNSSTLESLCENLPTKEKQK------LMEKFREMDTDNSDTLTLSELKA 414
+VK LM+A V + +++ + T + K L + F+ D DNS +T EL+
Sbjct: 425 EVKQLMDAADVDGNGSIDYVEFITATMHRHKLERDEHLFKAFQYFDKDNSGFITRDELET 484
Query: 415 GL--AKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLM 452
L ++G A + + D D +G I+ EF +M
Sbjct: 485 ALIEHEMGDA---DTIKDIISEVDTDNDGRINYEEFCAMM 521
|
Source: Hordeum vulgare subsp. vulgare Species: Hordeum vulgare Genus: Hordeum Family: Poaceae Order: Poales Class: Liliopsida Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255583607|ref|XP_002532559.1| calcium-dependent protein kinase, putative [Ricinus communis] gi|223527714|gb|EEF29820.1| calcium-dependent protein kinase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 536 bits (1380), Expect = e-149, Method: Compositional matrix adjust.
Identities = 262/458 (57%), Positives = 344/458 (75%), Gaps = 16/458 (3%)
Query: 8 NQRDPILGKAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAEN 67
++ D IL K YEDV LHY G+ LGRGQFGV+YLCTE ST + YACKSI+K+ + +
Sbjct: 68 HKPDTILEKPYEDVKLHYTIGKELGRGQFGVTYLCTEISTGKLYACKSISKRKLVTRNDK 127
Query: 68 DMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAA 127
+ ++REIQI +LSGQPN+VEFK YED+ +VH+VMELC GG+LFDRIIAKG+ SE++AA
Sbjct: 128 EDMKREIQIMQHLSGQPNIVEFKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYSEKEAA 187
Query: 128 TVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIV 187
++ R+IVN V+ CH MGVMHRDLKPENF S+D NALLK TDFG ++ EEG+ YRDIV
Sbjct: 188 SICRSIVNVVHACHFMGVMHRDLKPENFLLSSKDQNALLKATDFGLSVFIEEGKTYRDIV 247
Query: 188 GSGFYIAPEVLRRRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTD 247
GS +Y+APEVLRRRYGKE+DIWSAGV+LYILLSGVPPFWAE++KG +DAILQG+IDF++
Sbjct: 248 GSAYYVAPEVLRRRYGKEMDIWSAGVMLYILLSGVPPFWAESEKGIFDAILQGDIDFESP 307
Query: 248 PWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASD---DTSVILRMKQFRR 304
PWP+ISS+AKDLVRRMLT+DPK+RIT+ QVLEHPWL+E G+ASD D++V+ RMKQFR
Sbjct: 308 PWPTISSSAKDLVRRMLTQDPKKRITSTQVLEHPWLKEGGDASDKPIDSAVLSRMKQFRA 367
Query: 305 MNKLKKLTIKVIVEYLPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDV 364
MNKLKK+ +KVI E L +E Q LK F +DTD +GT++YDEL+AGL ++GS LTE +V
Sbjct: 368 MNKLKKMALKVIAENLSSDEIQGLKSMFANIDTDNSGTITYDELKAGLARLGSKLTETEV 427
Query: 365 KHLMEA--VKNSSTLESLCENLPTKEKQK------LMEKFREMDTDNSDTLTLSELKAGL 416
K LM+A V + T++ L T + + L + F+ D DNS +T EL+ +
Sbjct: 428 KQLMDAADVDGNGTIDYLEFITATMHRHRLEREEHLYKAFQYFDKDNSGFITRDELETAM 487
Query: 417 A--KLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLM 452
++G +++ + + + D D +G I+ EF +M
Sbjct: 488 KDYEMG---DDATIKEIISEVDADNDGRINYEEFCTMM 522
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|84626055|gb|ABC59619.1| calcium-dependent protein kinase [Triticum aestivum] | Back alignment and taxonomy information |
|---|
Score = 536 bits (1380), Expect = e-149, Method: Compositional matrix adjust.
Identities = 269/460 (58%), Positives = 341/460 (74%), Gaps = 17/460 (3%)
Query: 6 SKNQRDPILGKAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLA 65
SK D ILGK YEDV Y G+ LGRGQFGV+YLCTE ST R YACKSI+K+ + A
Sbjct: 66 SKPMPDTILGKQYEDVRSVYSLGKELGRGQFGVTYLCTEISTGRQYACKSISKRKLVSKA 125
Query: 66 ENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERD 125
+ + IRREIQI +LSGQPN+VEF YED+ +VHVVMELC GG+LFDRIIAKG+ SER
Sbjct: 126 DKEDIRREIQIMQHLSGQPNIVEFCGAYEDKGSVHVVMELCAGGELFDRIIAKGHYSERA 185
Query: 126 AATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRD 185
AAT+ R +VN VNVCH MGVMHRDLKPENF ++D+NA+LK TDFG ++ EEG++YRD
Sbjct: 186 AATICRGVVNVVNVCHFMGVMHRDLKPENFLLATKDENAVLKATDFGLSVFIEEGKMYRD 245
Query: 186 IVGSGFYIAPEVLRRRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFD 245
IVGS +Y+APEVLRR YGKEID+WSAGVILYILLSGVPPFWAET+KG +DAILQGEIDF+
Sbjct: 246 IVGSAYYVAPEVLRRNYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILQGEIDFE 305
Query: 246 TDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASD---DTSVILRMKQF 302
+ PWPSIS +AKDLVR+ML +DPK+RI++AQVL+HPWLRE GEASD D++V+ RMKQF
Sbjct: 306 SQPWPSISESAKDLVRKMLAQDPKKRISSAQVLQHPWLRE-GEASDKPIDSAVLSRMKQF 364
Query: 303 RRMNKLKKLTIKVIVEYLPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEF 362
R MNKLKK+ +KVI L +EE + LK+ F+ MDTD +GT++Y+EL+AGL K+GS L+E
Sbjct: 365 RAMNKLKKMALKVIASNLNEEEIKGLKQMFMNMDTDNSGTITYEELKAGLAKLGSKLSEA 424
Query: 363 DVKHLMEA--VKNSSTLESLCENLPTKEKQK------LMEKFREMDTDNSDTLTLSELKA 414
+VK LM+A V + +++ + T + K L + F+ D DNS +T EL+
Sbjct: 425 EVKQLMDAADVDGNGSIDYVEFITATMHRHKLERDEHLFKAFQYFDKDNSGFITRDELET 484
Query: 415 GL--AKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLM 452
L ++G A + + D D +G I+ EF +M
Sbjct: 485 ALIEHEMGDA---DTIKDIISEVDTDNDGRINYEEFCAMM 521
|
Source: Triticum aestivum Species: Triticum aestivum Genus: Triticum Family: Poaceae Order: Poales Class: Liliopsida Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 477 | ||||||
| TAIR|locus:2092399 | 541 | CPK9 "calmodulin-domain protei | 0.920 | 0.811 | 0.580 | 6e-135 | |
| TAIR|locus:2015846 | 521 | CPK33 "calcium-dependent prote | 0.920 | 0.842 | 0.572 | 3.8e-133 | |
| TAIR|locus:2138897 | 531 | CPK21 "calcium-dependent prote | 0.935 | 0.839 | 0.549 | 7.3e-130 | |
| TAIR|locus:2036783 | 551 | CPK19 "calcium-dependent prote | 0.955 | 0.827 | 0.511 | 1.3e-125 | |
| TAIR|locus:2204340 | 561 | CPK29 "calcium-dependent prote | 0.932 | 0.793 | 0.506 | 4.1e-120 | |
| TAIR|locus:2177023 | 528 | CPK17 "calcium-dependent prote | 0.922 | 0.833 | 0.497 | 1.3e-118 | |
| TAIR|locus:2150225 | 523 | CPK34 "AT5G19360" [Arabidopsis | 0.922 | 0.841 | 0.5 | 2e-118 | |
| TAIR|locus:2128409 | 529 | CDPK6 "calcium-dependent prote | 0.949 | 0.856 | 0.505 | 1.3e-116 | |
| TAIR|locus:2075885 | 646 | CPK2 "calmodulin-domain protei | 0.922 | 0.681 | 0.479 | 6.8e-111 | |
| TAIR|locus:2175503 | 610 | CPK1 "calcium dependent protei | 0.922 | 0.721 | 0.479 | 8.7e-111 |
| TAIR|locus:2092399 CPK9 "calmodulin-domain protein kinase 9" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1322 (470.4 bits), Expect = 6.0e-135, P = 6.0e-135
Identities = 262/451 (58%), Positives = 329/451 (72%)
Query: 13 ILGKAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRR 72
IL A+EDV L Y G+ LGRGQFGV+YLCTENST + YACKSI+KK + A+ D +RR
Sbjct: 79 ILENAFEDVKLFYTLGKELGRGQFGVTYLCTENSTGKKYACKSISKKKLVTKADKDDMRR 138
Query: 73 EIQIRLYLSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRA 132
EIQI +LSGQPN+VEFK YEDE AV++VMELC GG+LFDRIIAKG+ +ER AA+V R
Sbjct: 139 EIQIMQHLSGQPNIVEFKGAYEDEKAVNLVMELCAGGELFDRIIAKGHYTERAAASVCRQ 198
Query: 133 IVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFY 192
IVN V +CH MGV+HRDLKPENF S+D+ AL+K TDFG ++ EEG+VYRDIVGS +Y
Sbjct: 199 IVNVVKICHFMGVLHRDLKPENFLLSSKDEKALIKATDFGLSVFIEEGKVYRDIVGSAYY 258
Query: 193 IAPEVLRRRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSI 252
+APEVLRRRYGKE+DIWSAG+ILYILLSGVPPFWAET+KG +DAIL+G IDF++ PWPSI
Sbjct: 259 VAPEVLRRRYGKEVDIWSAGIILYILLSGVPPFWAETEKGIFDAILEGHIDFESQPWPSI 318
Query: 253 SSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASD---DTSVILRMKQFRRMNKLK 309
SS+AKDLVRRMLT DPKRRI+AA VL+HPWLRE GEASD D++V+ RMKQFR MNKLK
Sbjct: 319 SSSAKDLVRRMLTADPKRRISAADVLQHPWLREGGEASDKPIDSAVLSRMKQFRAMNKLK 378
Query: 310 KLTIKVIVEYLPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLME 369
KL +KVI E + EE Q LK F +DTD +GT++Y+EL+ GL K+GS LTE +VK LM+
Sbjct: 379 KLALKVIAENIDTEEIQGLKAMFANIDTDNSGTITYEELKEGLAKLGSKLTEAEVKQLMD 438
Query: 370 AVK---NSST--LESLCENLPT---KEKQKLMEKFREMDTDNSDTLTLSXXXXXXXXXXX 421
A N S +E + + + + L + F+ D D+S +T+
Sbjct: 439 AADVDGNGSIDYIEFITATMHRHRLESNENLYKAFQHFDKDSSGYITIDELESALKEYGM 498
Query: 422 XXXXSEVNQYMEAGDIDGNGNIDSIEFVNLM 452
+ + + + D D +G I+ EF +M
Sbjct: 499 GDDAT-IKEVLSDVDSDNDGRINYEEFCAMM 528
|
|
| TAIR|locus:2015846 CPK33 "calcium-dependent protein kinase 33" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1305 (464.4 bits), Expect = 3.8e-133, P = 3.8e-133
Identities = 258/451 (57%), Positives = 328/451 (72%)
Query: 13 ILGKAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRR 72
IL K YEDV L Y + LGRGQFGV+YLCTE ST + +ACKSI+KK + + + +RR
Sbjct: 61 ILEKPYEDVKLFYTLSKELGRGQFGVTYLCTEKSTGKRFACKSISKKKLVTKGDKEDMRR 120
Query: 73 EIQIRLYLSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRA 132
EIQI +LSGQPN+VEFK YEDE AV++VMELC GG+LFDRI+AKG+ SER AA+V R
Sbjct: 121 EIQIMQHLSGQPNIVEFKGAYEDEKAVNLVMELCAGGELFDRILAKGHYSERAAASVCRQ 180
Query: 133 IVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFY 192
IVN VN+CH MGVMHRDLKPENF S+D+ AL+K TDFG ++ EEG+VY+DIVGS +Y
Sbjct: 181 IVNVVNICHFMGVMHRDLKPENFLLSSKDEKALIKATDFGLSVFIEEGRVYKDIVGSAYY 240
Query: 193 IAPEVLRRRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSI 252
+APEVL+RRYGKEIDIWSAG+ILYILLSGVPPFWAET+KG +DAIL+GEIDF++ PWPSI
Sbjct: 241 VAPEVLKRRYGKEIDIWSAGIILYILLSGVPPFWAETEKGIFDAILEGEIDFESQPWPSI 300
Query: 253 SSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASD---DTSVILRMKQFRRMNKLK 309
S++AKDLVRRMLT+DPKRRI+AA+VL+HPWLRE GEASD D++V+ RMKQFR MNKLK
Sbjct: 301 SNSAKDLVRRMLTQDPKRRISAAEVLKHPWLREGGEASDKPIDSAVLSRMKQFRAMNKLK 360
Query: 310 KLTIKVIVEYLPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLME 369
KL +KVI E + EE Q LK F +DTD +GT++Y+EL+ GL K+GS LTE +VK LM+
Sbjct: 361 KLALKVIAENIDTEEIQGLKAMFANIDTDNSGTITYEELKEGLAKLGSRLTEAEVKQLMD 420
Query: 370 AVK---NSST--LESLCENLPT---KEKQKLMEKFREMDTDNSDTLTLSXXXXXXXXXXX 421
A N S +E + + + + + + F+ D D S +T
Sbjct: 421 AADVDGNGSIDYIEFITATMHRHRLESNENVYKAFQHFDKDGSGYITTDELEAALKEYGM 480
Query: 422 XXXXSEVNQYMEAGDIDGNGNIDSIEFVNLM 452
+ + + + D D +G I+ EF +M
Sbjct: 481 GDDAT-IKEILSDVDADNDGRINYDEFCAMM 510
|
|
| TAIR|locus:2138897 CPK21 "calcium-dependent protein kinase 21" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1274 (453.5 bits), Expect = 7.3e-130, P = 7.3e-130
Identities = 252/459 (54%), Positives = 325/459 (70%)
Query: 5 VSKNQRDPILGKAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRL 64
VS D ILGK +ED+ Y G+ LGRGQFG++Y+C E T YACKSI K+ +
Sbjct: 60 VSVRDPDTILGKPFEDIRKFYSLGKELGRGQFGITYMCKEIGTGNTYACKSILKRKLISK 119
Query: 65 AENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSER 124
+ + ++REIQI YLSGQPN+VE K YED ++H+VMELC GG+LFDRIIA+G+ SER
Sbjct: 120 QDKEDVKREIQIMQYLSGQPNIVEIKGAYEDRQSIHLVMELCAGGELFDRIIAQGHYSER 179
Query: 125 DAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYR 184
AA ++R+IVN V +CH MGV+HRDLKPENF S+++NA+LK TDFG ++ EEG+VYR
Sbjct: 180 AAAGIIRSIVNVVQICHFMGVVHRDLKPENFLLSSKEENAMLKATDFGLSVFIEEGKVYR 239
Query: 185 DIVGSGFYIAPEVLRRRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDF 244
DIVGS +Y+APEVLRR YGKEIDIWSAGVILYILLSGVPPFWAE +KG +D +++GEIDF
Sbjct: 240 DIVGSAYYVAPEVLRRSYGKEIDIWSAGVILYILLSGVPPFWAENEKGIFDEVIKGEIDF 299
Query: 245 DTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASD---DTSVILRMKQ 301
++PWPSIS +AKDLVR+MLTKDPKRRITAAQVLEHPW++ GEA D D++V+ RMKQ
Sbjct: 300 VSEPWPSISESAKDLVRKMLTKDPKRRITAAQVLEHPWIK-GGEAPDKPIDSAVLSRMKQ 358
Query: 302 FRRMNKLKKLTIKVIVEYLPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTE 361
FR MNKLKKL +KVI E L +EE + LK F +DTDK+GT++Y+EL+ GLT++GS L+E
Sbjct: 359 FRAMNKLKKLALKVIAESLSEEEIKGLKTMFANIDTDKSGTITYEELKTGLTRLGSRLSE 418
Query: 362 FDVKHLMEA--VKNSSTLESLCENLPTKEKQKL------MEKFREMDTDNSDTLTLSXXX 413
+VK LMEA V + T++ T + KL + F+ D DNS +T
Sbjct: 419 TEVKQLMEAADVDGNGTIDYYEFISATMHRYKLDRDEHVYKAFQHFDKDNSGHITRDELE 478
Query: 414 XXXXXXXXXXXXSEVNQYMEAGDIDGNGNIDSIEFVNLM 452
S + + + D D +G I+ EF +M
Sbjct: 479 SAMKEYGMGDEAS-IKEVISEVDTDNDGRINFEEFCAMM 516
|
|
| TAIR|locus:2036783 CPK19 "calcium-dependent protein kinase 19" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1234 (439.4 bits), Expect = 1.3e-125, P = 1.3e-125
Identities = 240/469 (51%), Positives = 324/469 (69%)
Query: 9 QRDPILGKAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAEND 68
Q +PILG+ +ED+ Y GR LGRGQFG++Y+CTE S+ + +ACKSI K+ +R + +
Sbjct: 82 QPEPILGRPFEDIKEKYSLGRELGRGQFGITYICTEISSGKNFACKSILKRKLIRTKDRE 141
Query: 69 MIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAAT 128
+RREIQI YLSGQPN+VE K YED +VH+VMELCEGG+LFD+I +G+ SE+ AA
Sbjct: 142 DVRREIQIMHYLSGQPNIVEIKGAYEDRQSVHLVMELCEGGELFDKITKRGHYSEKAAAE 201
Query: 129 VLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDD-NALLKVTDFGSALLFEEGQVYRDIV 187
++R++V V +CH MGV+HRDLKPENF S+D+ +++LK TDFG ++ EEG+VY DIV
Sbjct: 202 IIRSVVKVVQICHFMGVIHRDLKPENFLLSSKDEASSMLKATDFGVSVFIEEGKVYEDIV 261
Query: 188 GSGFYIAPEVLRRRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTD 247
GS +Y+APEVL+R YGK IDIWSAGVILYILL G PPFWAET KG ++ IL+GEIDF+++
Sbjct: 262 GSAYYVAPEVLKRNYGKAIDIWSAGVILYILLCGNPPFWAETDKGIFEEILRGEIDFESE 321
Query: 248 PWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASD---DTSVILRMKQFRR 304
PWPSIS +AKDLVR ML DPK+R TAAQVLEHPW+RE GEASD D++V+ RMKQ R
Sbjct: 322 PWPSISESAKDLVRNMLKYDPKKRFTAAQVLEHPWIREGGEASDKPIDSAVLSRMKQLRA 381
Query: 305 MNKLKKLTIKVIVEYLPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDV 364
MNKLKKL K I + L +EE + LK F MDTDK+GT++YDEL++GL K+GS LTE +V
Sbjct: 382 MNKLKKLAFKFIAQNLKEEELKGLKTMFANMDTDKSGTITYDELKSGLEKLGSRLTETEV 441
Query: 365 KHLMEA--VKNSSTLESL------CENLPTKEKQKLMEKFREMDTDNSDTLTLSXXXXXX 416
K L+E V + T++ + + + L + F+ D DNS ++
Sbjct: 442 KQLLEDADVDGNGTIDYIEFISATMNRFRVEREDNLFKAFQHFDKDNSGFISRQELETAM 501
Query: 417 XXXXXXXXXSEVNQYMEAGDIDGNGNIDSIEFVNLMTDIYKLETPELLE 465
+ + + D D +G+I+ EF N+M + +L++
Sbjct: 502 KEYNMGDDIM-IKEIISEVDADNDGSINYQEFCNMMKSCSQSHQSKLVQ 549
|
|
| TAIR|locus:2204340 CPK29 "calcium-dependent protein kinase 29" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1182 (421.1 bits), Expect = 4.1e-120, P = 4.1e-120
Identities = 232/458 (50%), Positives = 324/458 (70%)
Query: 6 SKNQRDPILGKAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLA 65
S +Q PIL + D+ Y + LGRGQFG++Y CT+ S R YACKSI+K+ +R
Sbjct: 93 SGSQIGPILNRPMIDLSALYDLHKELGRGQFGITYKCTDKSNGREYACKSISKRKLIRRK 152
Query: 66 ENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERD 125
+ + +RRE+ I +L+GQPN+VEF+ YED+ +H+VMELC GG+LFDRII KG SE++
Sbjct: 153 DIEDVRREVMILQHLTGQPNIVEFRGAYEDKDNLHLVMELCSGGELFDRIIKKGSYSEKE 212
Query: 126 AATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRD 185
AA + R IVN V+VCH MGV+HRDLKPENF +S ++++ +K TDFG ++ EEG+VYRD
Sbjct: 213 AANIFRQIVNVVHVCHFMGVVHRDLKPENFLLVSNEEDSPIKATDFGLSVFIEEGKVYRD 272
Query: 186 IVGSGFYIAPEVLRRRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFD 245
IVGS +Y+APEVL R YGKEID+WSAGV+LYILLSGVPPFW ET+K ++AIL+G++D +
Sbjct: 273 IVGSAYYVAPEVLHRNYGKEIDVWSAGVMLYILLSGVPPFWGETEKTIFEAILEGKLDLE 332
Query: 246 TDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASD---DTSVILRMKQF 302
T PWP+IS +AKDL+R+ML +DPK+RITAA+ LEHPW+ ++ + SD +++V++RMKQF
Sbjct: 333 TSPWPTISESAKDLIRKMLIRDPKKRITAAEALEHPWMTDT-KISDKPINSAVLVRMKQF 391
Query: 303 RRMNKLKKLTIKVIVEYLPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEF 362
R MNKLKKL +KVI E L +EE + LK+ F MDTD++GT+++DELR GL ++GS LTE
Sbjct: 392 RAMNKLKKLALKVIAENLSEEEIKGLKQTFKNMDTDESGTITFDELRNGLHRLGSKLTES 451
Query: 363 DVKHLMEA--VKNSSTLESLCENLPTK-----EKQK-LMEKFREMDTDNSDTLTLSXXXX 414
++K LMEA V S T++ + T EK++ L+E F+ D D S +T
Sbjct: 452 EIKQLMEAADVDKSGTIDYIEFVTATMHRHRLEKEENLIEAFKYFDKDRSGFITRDELKH 511
Query: 415 XXXXXXXXXXXSEVNQYMEAGDIDGNGNIDSIEFVNLM 452
+ +++ + D D +G I+ EFV +M
Sbjct: 512 SMTEYGMGDDAT-IDEVINDVDTDNDGRINYEEFVAMM 548
|
|
| TAIR|locus:2177023 CPK17 "calcium-dependent protein kinase 17" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1168 (416.2 bits), Expect = 1.3e-118, P = 1.3e-118
Identities = 225/452 (49%), Positives = 314/452 (69%)
Query: 12 PILGKAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIR 71
P+LG+ EDV Y G+ LGRGQFGV++LCT+ +T +ACK+IAK+ + + + +R
Sbjct: 60 PVLGRPMEDVKASYSLGKELGRGQFGVTHLCTQKATGHQFACKTIAKRKLVNKEDIEDVR 119
Query: 72 REIQIRLYLSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLR 131
RE+QI +L+GQPN+VE K YED+ +VH+VMELC GG+LFDRIIAKG+ SER AA++LR
Sbjct: 120 REVQIMHHLTGQPNIVELKGAYEDKHSVHLVMELCAGGELFDRIIAKGHYSERAAASLLR 179
Query: 132 AIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGF 191
IV V+ CHSMGV+HRDLKPENF +++D+N+ LK TDFG ++ ++ G+V++DIVGS +
Sbjct: 180 TIVQIVHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKPGEVFKDIVGSAY 239
Query: 192 YIAPEVLRRRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPS 251
YIAPEVL+R+YG E DIWS GV+LYILL GVPPFWAE++ G ++AIL+G +DF +DPWPS
Sbjct: 240 YIAPEVLKRKYGPEADIWSIGVMLYILLCGVPPFWAESENGIFNAILRGHVDFSSDPWPS 299
Query: 252 ISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASD---DTSVILRMKQFRRMNKL 308
IS AKDLV++ML DPK+R+TAAQVL HPW++E GEA D D +V+ R+KQF+ MN
Sbjct: 300 ISPQAKDLVKKMLNSDPKQRLTAAQVLNHPWIKEDGEAPDVPLDNAVMSRLKQFKAMNNF 359
Query: 309 KKLTIKVIVEYLPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLM 368
KK+ ++VI L +EE LKE F MDTD +GT++ +ELR GL K G+ L+E++V+ LM
Sbjct: 360 KKVALRVIAGCLSEEEIMGLKEMFKGMDTDSSGTITLEELRQGLAKQGTRLSEYEVQQLM 419
Query: 369 EAVK--NSSTL---ESLCENLPTKE---KQKLMEKFREMDTDNSDTLTLSXXXXXXXXXX 420
EA + T+ E + + ++ L F+ D DNS +T+
Sbjct: 420 EAADADGNGTIDYGEFIAATMHINRLDREEHLYSAFQHFDKDNSGYITMEELEQALREFG 479
Query: 421 XXXXXSEVNQYMEAGDIDGNGNIDSIEFVNLM 452
++ + + D D +G I+ EFV +M
Sbjct: 480 MNDGR-DIKEIISEVDGDNDGRINYDEFVAMM 510
|
|
| TAIR|locus:2150225 CPK34 "AT5G19360" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1166 (415.5 bits), Expect = 2.0e-118, P = 2.0e-118
Identities = 226/452 (50%), Positives = 313/452 (69%)
Query: 12 PILGKAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIR 71
P+LG+ EDV Y G+ LGRGQFGV++LCT+ +T +ACK+IAK+ + + + +R
Sbjct: 55 PVLGRPMEDVKSSYTLGKELGRGQFGVTHLCTQKATGLQFACKTIAKRKLVNKEDIEDVR 114
Query: 72 REIQIRLYLSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLR 131
RE+QI +L+GQPN+VE K YED+ +VH+VMELC GG+LFDRIIAKG+ SER AA++LR
Sbjct: 115 REVQIMHHLTGQPNIVELKGAYEDKHSVHLVMELCAGGELFDRIIAKGHYSERAAASLLR 174
Query: 132 AIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGF 191
IV ++ CHSMGV+HRDLKPENF +S+D+N+ LK TDFG ++ ++ G+V++DIVGS +
Sbjct: 175 TIVQIIHTCHSMGVIHRDLKPENFLLLSKDENSPLKATDFGLSVFYKPGEVFKDIVGSAY 234
Query: 192 YIAPEVLRRRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPS 251
YIAPEVLRR+YG E DIWS GV+LYILL GVPPFWAE++ G ++AIL G++DF +DPWP
Sbjct: 235 YIAPEVLRRKYGPEADIWSIGVMLYILLCGVPPFWAESENGIFNAILSGQVDFSSDPWPV 294
Query: 252 ISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASD---DTSVILRMKQFRRMNKL 308
IS AKDLVR+ML DPK+R+TAAQVL HPW++E GEA D D +V+ R+KQF+ MN
Sbjct: 295 ISPQAKDLVRKMLNSDPKQRLTAAQVLNHPWIKEDGEAPDVPLDNAVMSRLKQFKAMNNF 354
Query: 309 KKLTIKVIVEYLPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLM 368
KK+ ++VI L +EE LKE F MDTD +GT++ +ELR GL K G+ L+E++V+ LM
Sbjct: 355 KKVALRVIAGCLSEEEIMGLKEMFKGMDTDNSGTITLEELRQGLAKQGTRLSEYEVQQLM 414
Query: 369 EAVK--NSSTL---ESLCENLPTKE---KQKLMEKFREMDTDNSDTLTLSXXXXXXXXXX 420
EA + T+ E + + ++ L F+ D DNS +T +
Sbjct: 415 EAADADGNGTIDYGEFIAATMHINRLDREEHLYSAFQHFDKDNSGYIT-TEELEQALREF 473
Query: 421 XXXXXSEVNQYMEAGDIDGNGNIDSIEFVNLM 452
++ + + D D +G I+ EFV +M
Sbjct: 474 GMNDGRDIKEIISEVDGDNDGRINYEEFVAMM 505
|
|
| TAIR|locus:2128409 CDPK6 "calcium-dependent protein kinase 6" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1149 (409.5 bits), Expect = 1.3e-116, P = 1.3e-116
Identities = 240/475 (50%), Positives = 310/475 (65%)
Query: 4 SVSKNQRDPILGKAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMR 63
+ S Q ILG+ E+V Y FGR LGRGQFGV+YL T T + ACKSI P R
Sbjct: 57 TTSTQQNGRILGRPMEEVRRTYEFGRELGRGQFGVTYLVTHKETKQQVACKSI---PTRR 113
Query: 64 LAENDMI---RREIQIRLYLSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGY 120
L D I RRE+QI +LSG N+V+ K YED +V+++MELCEGG+LFDRII+KG
Sbjct: 114 LVHKDDIEDVRREVQIMHHLSGHRNIVDLKGAYEDRHSVNLIMELCEGGELFDRIISKGL 173
Query: 121 NSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEG 180
SER AA + R +V V+ CHSMGVMHRDLKPENF F+S+D+N+ LK TDFG ++ F+ G
Sbjct: 174 YSERAAADLCRQMVMVVHSCHSMGVMHRDLKPENFLFLSKDENSPLKATDFGLSVFFKPG 233
Query: 181 QVYRDIVGSGFYIAPEVLRRRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQG 240
++D+VGS +Y+APEVL+R YG E DIWSAGVILYILLSGVPPFW E + G +DAILQG
Sbjct: 234 DKFKDLVGSAYYVAPEVLKRNYGPEADIWSAGVILYILLSGVPPFWGENETGIFDAILQG 293
Query: 241 EIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASD---DTSVIL 297
++DF DPWP++S AKDLVR+ML DPK R+TAA+VL HPW+RE GEASD D +V+
Sbjct: 294 QLDFSADPWPALSDGAKDLVRKMLKYDPKDRLTAAEVLNHPWIREDGEASDKPLDNAVLS 353
Query: 298 RMKQFRRMNKLKKLTIKVIVEYLPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGS 357
RMKQFR MNKLKK+ +KVI E L +EE LKE F +DTD NG ++ +ELR GL K+GS
Sbjct: 354 RMKQFRAMNKLKKMALKVIAENLSEEEIIGLKEMFKSLDTDNNGIVTLEELRTGLPKLGS 413
Query: 358 MLTEFDVKHLMEAVKNSST-----LESLCENLPTKEKQK---LMEKFREMDTDNSDTLTL 409
++E +++ LMEA LE + + ++ L F+ D DNS +T+
Sbjct: 414 KISEAEIRQLMEAADMDGDGSIDYLEFISATMHMNRIEREDHLYTAFQFFDNDNSGYITM 473
Query: 410 SXXXXXXXXXXXXXXXSEVNQYMEAGDIDGNGNIDSIEFVNLMTDIYKLETPELL 464
S + + + D D +G I+ EFV +M K PEL+
Sbjct: 474 EELELAMKKYNMGDDKS-IKEIIAEVDTDRDGKINYEEFVAMM----KKGNPELV 523
|
|
| TAIR|locus:2075885 CPK2 "calmodulin-domain protein kinase cdpk isoform 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1095 (390.5 bits), Expect = 6.8e-111, P = 6.8e-111
Identities = 217/453 (47%), Positives = 302/453 (66%)
Query: 11 DPILGKAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMI 70
+ +L + E+ Y GR LG+GQFG ++LC E T YACKSI+K+ + + + +
Sbjct: 172 ESVLQRKTENFKEFYSLGRKLGQGQFGTTFLCLEKGTGNEYACKSISKRKLLTDEDVEDV 231
Query: 71 RREIQIRLYLSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVL 130
RREIQI +L+G PNV+ K YED AVH+VMELC GG+LFDRII +G+ +ER AA +
Sbjct: 232 RREIQIMHHLAGHPNVISIKGAYEDVVAVHLVMELCSGGELFDRIIQRGHYTERKAAELA 291
Query: 131 RAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSG 190
R IV + CHS+GVMHRDLKPENF F+SR++++LLK DFG ++ F+ +V+ D+VGS
Sbjct: 292 RTIVGVLEACHSLGVMHRDLKPENFLFVSREEDSLLKTIDFGLSMFFKPDEVFTDVVGSP 351
Query: 191 FYIAPEVLRRRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWP 250
+Y+APEVLR+RYG E D+WSAGVI+YILLSGVPPFWAET++G ++ +L G++DF +DPWP
Sbjct: 352 YYVAPEVLRKRYGPESDVWSAGVIVYILLSGVPPFWAETEQGIFEQVLHGDLDFSSDPWP 411
Query: 251 SISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASD---DTSVILRMKQFRRMNK 307
SIS +AKDLVR+ML +DPKRR+TA QVL HPW++ G A D D++V+ RMKQF MNK
Sbjct: 412 SISESAKDLVRKMLVRDPKRRLTAHQVLCHPWVQIDGVAPDKPLDSAVLSRMKQFSAMNK 471
Query: 308 LKKLTIKVIVEYLPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHL 367
KK+ ++VI E L +EE LK+ F +D D +G ++++EL+AGL +VG+ L E ++ L
Sbjct: 472 FKKMALRVIAESLSEEEIAGLKQMFKMIDADNSGQITFEELKAGLKRVGANLKESEILDL 531
Query: 368 MEA--VKNSSTL---ESLCENLPTKEKQK---LMEKFREMDTDNSDTLTLSXXXXXXXXX 419
M+A V NS T+ E + L + ++ L F D D S +T
Sbjct: 532 MQAADVDNSGTIDYKEFIAATLHLNKIEREDHLFAAFSYFDKDESGFITPDELQQACEEF 591
Query: 420 XXXXXXSEVNQYMEAGDIDGNGNIDSIEFVNLM 452
+ + + M D D +G ID EFV +M
Sbjct: 592 GVED--ARIEEMMRDVDQDKDGRIDYNEFVAMM 622
|
|
| TAIR|locus:2175503 CPK1 "calcium dependent protein kinase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1094 (390.2 bits), Expect = 8.7e-111, P = 8.7e-111
Identities = 217/453 (47%), Positives = 301/453 (66%)
Query: 11 DPILGKAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMI 70
+ +L + E+ Y GR LG+GQFG ++LC E +T + +ACKSIAK+ + + + +
Sbjct: 136 ESVLQRKTENFKEFYSLGRKLGQGQFGTTFLCVEKTTGKEFACKSIAKRKLLTDEDVEDV 195
Query: 71 RREIQIRLYLSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVL 130
RREIQI +L+G PNV+ K YED AVH+VME C GG+LFDRII +G+ +ER AA +
Sbjct: 196 RREIQIMHHLAGHPNVISIKGAYEDVVAVHLVMECCAGGELFDRIIQRGHYTERKAAELT 255
Query: 131 RAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSG 190
R IV V CHS+GVMHRDLKPENF F+S+ +++LLK DFG ++ F+ V+ D+VGS
Sbjct: 256 RTIVGVVEACHSLGVMHRDLKPENFLFVSKHEDSLLKTIDFGLSMFFKPDDVFTDVVGSP 315
Query: 191 FYIAPEVLRRRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWP 250
+Y+APEVLR+RYG E D+WSAGVI+YILLSGVPPFWAET++G ++ +L G++DF +DPWP
Sbjct: 316 YYVAPEVLRKRYGPEADVWSAGVIVYILLSGVPPFWAETEQGIFEQVLHGDLDFSSDPWP 375
Query: 251 SISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASD---DTSVILRMKQFRRMNK 307
SIS +AKDLVR+ML +DPK+R+TA QVL HPW++ G A D D++V+ RMKQF MNK
Sbjct: 376 SISESAKDLVRKMLVRDPKKRLTAHQVLCHPWVQVDGVAPDKPLDSAVLSRMKQFSAMNK 435
Query: 308 LKKLTIKVIVEYLPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHL 367
KK+ ++VI E L +EE LKE F +D DK+G ++++EL+AGL +VG+ L E ++ L
Sbjct: 436 FKKMALRVIAESLSEEEIAGLKEMFNMIDADKSGQITFEELKAGLKRVGANLKESEILDL 495
Query: 368 MEA--VKNSSTL---ESLCENLPTKEKQK---LMEKFREMDTDNSDTLTLSXXXXXXXXX 419
M+A V NS T+ E + L + ++ L F D D S +T
Sbjct: 496 MQAADVDNSGTIDYKEFIAATLHLNKIEREDHLFAAFTYFDKDGSGYITPDELQQACEEF 555
Query: 420 XXXXXXSEVNQYMEAGDIDGNGNIDSIEFVNLM 452
+ + M D D +G ID EFV +M
Sbjct: 556 GVEDV--RIEELMRDVDQDNDGRIDYNEFVAMM 586
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| P53683 | CDPK2_ORYSJ | 2, ., 7, ., 1, 1, ., 1 | 0.5780 | 0.9182 | 0.8217 | yes | no |
| P49101 | CDPK2_MAIZE | 2, ., 7, ., 1, 1, ., 1 | 0.5758 | 0.9203 | 0.8557 | N/A | no |
| Q8ICR0 | CDPK2_PLAF7 | 2, ., 7, ., 1, 1, ., 1 | 0.3410 | 0.8721 | 0.8172 | yes | no |
| Q38868 | CDPK9_ARATH | 2, ., 7, ., 1, 1, ., 1 | 0.5786 | 0.9350 | 0.8243 | yes | no |
| P28582 | CDPK_DAUCA | 2, ., 7, ., 1, 1, ., 1 | 0.5616 | 0.9308 | 0.8345 | N/A | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 4th Layer | 2.7.11.1 | 0.946 |
| 3rd Layer | 2.7.11 | 0.963 |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 477 | |||
| smart00220 | 254 | smart00220, S_TKc, Serine/Threonine protein kinase | 2e-92 | |
| pfam00069 | 260 | pfam00069, Pkinase, Protein kinase domain | 1e-88 | |
| cd05123 | 250 | cd05123, STKc_AGC, Catalytic domain of AGC family | 4e-62 | |
| cd00180 | 215 | cd00180, PKc, Catalytic domain of Protein Kinases | 5e-57 | |
| cd08215 | 258 | cd08215, STKc_Nek, Catalytic domain of the Protein | 1e-52 | |
| cd05579 | 265 | cd05579, STKc_MAST_like, Catalytic domain of Micro | 1e-52 | |
| cd05581 | 280 | cd05581, STKc_PDK1, Catalytic domain of the Protei | 4e-52 | |
| cd06606 | 260 | cd06606, STKc_MAPKKK, Catalytic domain of the Prot | 8e-51 | |
| COG0515 | 384 | COG0515, SPS1, Serine/threonine protein kinase [Ge | 3e-48 | |
| cd05580 | 290 | cd05580, STKc_PKA, Catalytic domain of the Protein | 6e-48 | |
| cd05573 | 350 | cd05573, STKc_ROCK_NDR_like, Catalytic domain of R | 1e-43 | |
| cd06614 | 286 | cd06614, STKc_PAK, Catalytic domain of the Protein | 1e-42 | |
| cd05611 | 260 | cd05611, STKc_Rim15_like, Catalytic domain of fung | 4e-42 | |
| cd05572 | 262 | cd05572, STKc_cGK_PKG, Catalytic domain of the Pro | 1e-41 | |
| cd05578 | 258 | cd05578, STKc_Yank1, Catalytic domain of the Prote | 2e-40 | |
| cd05122 | 253 | cd05122, PKc_STE, Catalytic domain of STE family P | 3e-40 | |
| cd07829 | 282 | cd07829, STKc_CDK_like, Catalytic domain of Cyclin | 5e-40 | |
| cd07832 | 286 | cd07832, STKc_CCRK, Catalytic domain of the Serine | 1e-39 | |
| cd06648 | 285 | cd06648, STKc_PAK_II, Catalytic domain of the Prot | 5e-37 | |
| cd06627 | 254 | cd06627, STKc_Cdc7_like, Catalytic domain of Cell | 7e-37 | |
| cd06623 | 264 | cd06623, PKc_MAPKK_plant_like, Catalytic domain of | 1e-36 | |
| cd05612 | 291 | cd05612, STKc_PRKX_like, Catalytic domain of PRKX- | 2e-36 | |
| cd05596 | 370 | cd05596, STKc_ROCK, Catalytic domain of the Protei | 3e-36 | |
| cd05118 | 283 | cd05118, STKc_CMGC, Catalytic domain of CMGC famil | 6e-36 | |
| PTZ00263 | 329 | PTZ00263, PTZ00263, protein kinase A catalytic sub | 4e-35 | |
| cd05574 | 316 | cd05574, STKc_phototropin_like, Catalytic domain o | 5e-35 | |
| cd07841 | 298 | cd07841, STKc_CDK7, Catalytic domain of the Serine | 5e-35 | |
| cd06626 | 264 | cd06626, STKc_MEKK4, Catalytic domain of the Prote | 7e-35 | |
| cd08217 | 265 | cd08217, STKc_Nek2, Catalytic domain of the Protei | 8e-35 | |
| cd05583 | 288 | cd05583, STKc_MSK_N, N-terminal catalytic domain o | 3e-34 | |
| cd05600 | 333 | cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fun | 3e-34 | |
| cd05584 | 323 | cd05584, STKc_p70S6K, Catalytic domain of the Prot | 3e-33 | |
| cd05609 | 305 | cd05609, STKc_MAST, Catalytic domain of the Protei | 7e-33 | |
| cd05586 | 330 | cd05586, STKc_Sck1_like, Catalytic domain of Suppr | 2e-32 | |
| cd06609 | 274 | cd06609, STKc_MST3_like, Catalytic domain of Mamma | 3e-32 | |
| cd07830 | 283 | cd07830, STKc_MAK_like, Catalytic domain of Male g | 3e-32 | |
| cd05621 | 370 | cd05621, STKc_ROCK2, Catalytic domain of the Prote | 4e-32 | |
| cd06610 | 267 | cd06610, STKc_OSR1_SPAK, Catalytic domain of the P | 7e-32 | |
| cd08221 | 256 | cd08221, STKc_Nek9, Catalytic domain of the Protei | 7e-32 | |
| cd05632 | 285 | cd05632, STKc_GRK5, Catalytic domain of the Protei | 9e-32 | |
| cd06612 | 256 | cd06612, STKc_MST1_2, Catalytic domain of the Prot | 3e-31 | |
| cd05613 | 290 | cd05613, STKc_MSK1_N, N-terminal catalytic domain | 3e-31 | |
| cd05598 | 376 | cd05598, STKc_LATS, Catalytic domain of the Protei | 3e-31 | |
| cd08219 | 255 | cd08219, STKc_Nek3, Catalytic domain of the Protei | 4e-31 | |
| cd05570 | 318 | cd05570, STKc_PKC, Catalytic domain of the Protein | 4e-31 | |
| cd06657 | 292 | cd06657, STKc_PAK4, Catalytic domain of the Protei | 5e-31 | |
| cd07838 | 287 | cd07838, STKc_CDK4_6_like, Catalytic domain of Cyc | 6e-31 | |
| cd05614 | 332 | cd05614, STKc_MSK2_N, N-terminal catalytic domain | 8e-31 | |
| cd05605 | 285 | cd05605, STKc_GRK4_like, Catalytic domain of G pro | 4e-30 | |
| cd05599 | 364 | cd05599, STKc_NDR_like, Catalytic domain of Nuclea | 5e-30 | |
| cd05622 | 371 | cd05622, STKc_ROCK1, Catalytic domain of the Prote | 6e-30 | |
| cd07833 | 288 | cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dep | 6e-30 | |
| cd06659 | 297 | cd06659, STKc_PAK6, Catalytic domain of the Protei | 6e-30 | |
| cd05577 | 277 | cd05577, STKc_GRK, Catalytic domain of the Protein | 8e-30 | |
| cd05601 | 330 | cd05601, STKc_CRIK, Catalytic domain of the Protei | 1e-29 | |
| cd05630 | 285 | cd05630, STKc_GRK6, Catalytic domain of the Protei | 1e-29 | |
| cd05597 | 331 | cd05597, STKc_DMPK_like, Catalytic domain of Myoto | 2e-29 | |
| cd06658 | 292 | cd06658, STKc_PAK5, Catalytic domain of the Protei | 2e-29 | |
| cd05571 | 323 | cd05571, STKc_PKB, Catalytic domain of the Protein | 2e-29 | |
| cd06625 | 263 | cd06625, STKc_MEKK3_like, Catalytic domain of MAP/ | 3e-29 | |
| cd05631 | 285 | cd05631, STKc_GRK4, Catalytic domain of the Protei | 4e-29 | |
| cd06917 | 277 | cd06917, STKc_NAK1_like, Catalytic domain of Funga | 5e-29 | |
| cd07834 | 330 | cd07834, STKc_MAPK, Catalytic domain of the Serine | 6e-29 | |
| cd08530 | 256 | cd08530, STKc_CNK2-like, Catalytic domain of the P | 1e-28 | |
| cd06647 | 293 | cd06647, STKc_PAK_I, Catalytic domain of the Prote | 2e-28 | |
| cd06632 | 258 | cd06632, STKc_MEKK1_plant, Catalytic domain of the | 4e-28 | |
| cd08220 | 256 | cd08220, STKc_Nek8, Catalytic domain of the Protei | 5e-28 | |
| cd05604 | 325 | cd05604, STKc_SGK3, Catalytic domain of the Protei | 7e-28 | |
| cd05603 | 321 | cd05603, STKc_SGK2, Catalytic domain of the Protei | 2e-27 | |
| PTZ00426 | 340 | PTZ00426, PTZ00426, cAMP-dependent protein kinase | 3e-27 | |
| cd05602 | 325 | cd05602, STKc_SGK1, Catalytic domain of the Protei | 3e-27 | |
| cd05595 | 323 | cd05595, STKc_PKB_beta, Catalytic domain of the Pr | 5e-27 | |
| cd05575 | 323 | cd05575, STKc_SGK, Catalytic domain of the Protein | 5e-27 | |
| cd05624 | 331 | cd05624, STKc_MRCK_beta, Catalytic domain of the P | 9e-27 | |
| cd06605 | 265 | cd06605, PKc_MAPKK, Catalytic domain of the dual-s | 1e-26 | |
| cd07840 | 287 | cd07840, STKc_CDK9_like, Catalytic domain of Cycli | 1e-26 | |
| cd06655 | 296 | cd06655, STKc_PAK2, Catalytic domain of the Protei | 1e-26 | |
| cd08218 | 256 | cd08218, STKc_Nek1, Catalytic domain of the Protei | 2e-26 | |
| cd06656 | 297 | cd06656, STKc_PAK3, Catalytic domain of the Protei | 2e-26 | |
| cd06651 | 266 | cd06651, STKc_MEKK3, Catalytic domain of the Prote | 2e-26 | |
| cd05623 | 332 | cd05623, STKc_MRCK_alpha, Catalytic domain of the | 3e-26 | |
| cd05587 | 324 | cd05587, STKc_cPKC, Catalytic domain of the Protei | 3e-26 | |
| cd05592 | 316 | cd05592, STKc_nPKC_theta_delta, Catalytic domain o | 5e-26 | |
| cd05589 | 324 | cd05589, STKc_PKN, Catalytic domain of the Protein | 6e-26 | |
| cd05627 | 360 | cd05627, STKc_NDR2, Catalytic domain of the Protei | 8e-26 | |
| cd08529 | 256 | cd08529, STKc_FA2-like, Catalytic domain of the Pr | 9e-26 | |
| cd05593 | 328 | cd05593, STKc_PKB_gamma, Catalytic domain of the P | 1e-25 | |
| cd06622 | 286 | cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of | 1e-25 | |
| cd05594 | 325 | cd05594, STKc_PKB_alpha, Catalytic domain of the P | 3e-25 | |
| cd05590 | 320 | cd05590, STKc_nPKC_eta, Catalytic domain of the Pr | 3e-25 | |
| cd05585 | 312 | cd05585, STKc_YPK1_like, Catalytic domain of Yeast | 3e-25 | |
| cd07831 | 282 | cd07831, STKc_MOK, Catalytic domain of the Serine/ | 3e-25 | |
| cd06611 | 280 | cd06611, STKc_SLK_like, Catalytic domain of Ste20- | 5e-25 | |
| cd05582 | 318 | cd05582, STKc_RSK_N, N-terminal catalytic domain o | 1e-24 | |
| cd05629 | 377 | cd05629, STKc_NDR_like_fungal, Catalytic domain of | 1e-24 | |
| cd06654 | 296 | cd06654, STKc_PAK1, Catalytic domain of the Protei | 1e-24 | |
| cd08222 | 260 | cd08222, STKc_Nek11, Catalytic domain of the Prote | 3e-24 | |
| cd07843 | 293 | cd07843, STKc_CDC2L1, Catalytic domain of the Seri | 4e-24 | |
| cd05628 | 363 | cd05628, STKc_NDR1, Catalytic domain of the Protei | 6e-24 | |
| cd08225 | 257 | cd08225, STKc_Nek5, Catalytic domain of the Protei | 8e-24 | |
| cd06652 | 265 | cd06652, STKc_MEKK2, Catalytic domain of the Prote | 1e-23 | |
| cd05591 | 321 | cd05591, STKc_nPKC_epsilon, Catalytic domain of th | 2e-23 | |
| cd05616 | 323 | cd05616, STKc_cPKC_beta, Catalytic domain of the P | 2e-23 | |
| cd06653 | 264 | cd06653, STKc_MEKK3_like_1, Catalytic domain of MA | 2e-23 | |
| cd05615 | 323 | cd05615, STKc_cPKC_alpha, Catalytic domain of the | 5e-23 | |
| cd06613 | 262 | cd06613, STKc_MAP4K3_like, Catalytic domain of Mit | 5e-23 | |
| cd06631 | 265 | cd06631, STKc_YSK4, Catalytic domain of the Protei | 6e-23 | |
| cd07851 | 343 | cd07851, STKc_p38, Catalytic domain of the Serine/ | 8e-23 | |
| cd05625 | 382 | cd05625, STKc_LATS1, Catalytic domain of the Prote | 9e-23 | |
| PLN00034 | 353 | PLN00034, PLN00034, mitogen-activated protein kina | 1e-22 | |
| cd05607 | 277 | cd05607, STKc_GRK7, Catalytic domain of the Protei | 1e-22 | |
| cd07856 | 328 | cd07856, STKc_Sty1_Hog1, Catalytic domain of the S | 2e-22 | |
| cd08223 | 257 | cd08223, STKc_Nek4, Catalytic domain of the Protei | 2e-22 | |
| cd06607 | 307 | cd06607, STKc_TAO, Catalytic domain of the Protein | 2e-22 | |
| cd06641 | 277 | cd06641, STKc_MST3, Catalytic domain of the Protei | 4e-22 | |
| cd05606 | 278 | cd05606, STKc_beta_ARK, Catalytic domain of the Pr | 5e-22 | |
| cd05618 | 329 | cd05618, STKc_aPKC_iota, Catalytic domain of the P | 6e-22 | |
| cd06642 | 277 | cd06642, STKc_STK25-YSK1, Catalytic domain of the | 8e-22 | |
| smart00219 | 257 | smart00219, TyrKc, Tyrosine kinase, catalytic doma | 9e-22 | |
| cd05626 | 381 | cd05626, STKc_LATS2, Catalytic domain of the Prote | 9e-22 | |
| cd07847 | 286 | cd07847, STKc_CDKL1_4, Catalytic domain of the Ser | 2e-21 | |
| cd07845 | 309 | cd07845, STKc_CDK10, Catalytic domain of the Serin | 2e-21 | |
| smart00221 | 258 | smart00221, STYKc, Protein kinase; unclassified sp | 2e-21 | |
| cd05608 | 280 | cd05608, STKc_GRK1, Catalytic domain of the Protei | 2e-21 | |
| cd07861 | 285 | cd07861, STKc_CDK1_euk, Catalytic domain of the Se | 2e-21 | |
| cd05620 | 316 | cd05620, STKc_nPKC_delta, Catalytic domain of the | 2e-21 | |
| cd07835 | 283 | cd07835, STKc_CDK1_like, Catalytic domain of Cycli | 3e-21 | |
| cd05619 | 316 | cd05619, STKc_nPKC_theta, Catalytic domain of the | 3e-21 | |
| cd06628 | 267 | cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain o | 3e-21 | |
| cd06608 | 275 | cd06608, STKc_myosinIII_like, Catalytic domain of | 3e-21 | |
| cd08224 | 267 | cd08224, STKc_Nek6_Nek7, Catalytic domain of the P | 4e-21 | |
| cd07857 | 332 | cd07857, STKc_MPK1, Catalytic domain of the Serine | 6e-21 | |
| cd07849 | 336 | cd07849, STKc_ERK1_2_like, Catalytic domain of Ext | 6e-21 | |
| cd05633 | 279 | cd05633, STKc_GRK3, Catalytic domain of the Protei | 7e-21 | |
| cd07858 | 337 | cd07858, STKc_TEY_MAPK_plant, Catalytic domain of | 8e-21 | |
| cd06633 | 313 | cd06633, STKc_TAO3, Catalytic domain of the Protei | 9e-21 | |
| cd06645 | 267 | cd06645, STKc_MAP4K3, Catalytic domain of the Prot | 9e-21 | |
| PTZ00267 | 478 | PTZ00267, PTZ00267, NIMA-related protein kinase; P | 1e-20 | |
| PLN00009 | 294 | PLN00009, PLN00009, cyclin-dependent kinase A; Pro | 1e-20 | |
| cd07846 | 286 | cd07846, STKc_CDKL2_3, Catalytic domain of the Ser | 2e-20 | |
| cd07836 | 284 | cd07836, STKc_Pho85, Catalytic domain of the Serin | 3e-20 | |
| cd07842 | 316 | cd07842, STKc_CDK8_like, Catalytic domain of Cycli | 4e-20 | |
| cd06640 | 277 | cd06640, STKc_MST4, Catalytic domain of the Protei | 4e-20 | |
| cd06621 | 287 | cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of | 6e-20 | |
| PTZ00283 | 496 | PTZ00283, PTZ00283, serine/threonine protein kinas | 1e-19 | |
| cd07864 | 302 | cd07864, STKc_CDK12, Catalytic domain of the Serin | 2e-19 | |
| cd07855 | 334 | cd07855, STKc_ERK5, Catalytic domain of the Serine | 2e-19 | |
| cd05617 | 327 | cd05617, STKc_aPKC_zeta, Catalytic domain of the P | 2e-19 | |
| cd06635 | 317 | cd06635, STKc_TAO1, Catalytic domain of the Protei | 3e-19 | |
| cd07859 | 338 | cd07859, STKc_TDY_MAPK_plant, Catalytic domain of | 5e-19 | |
| cd06634 | 308 | cd06634, STKc_TAO2, Catalytic domain of the Protei | 5e-19 | |
| PTZ00024 | 335 | PTZ00024, PTZ00024, cyclin-dependent protein kinas | 7e-19 | |
| cd05588 | 329 | cd05588, STKc_aPKC, Catalytic domain of the Protei | 8e-19 | |
| cd07854 | 342 | cd07854, STKc_MAPK4_6, Catalytic domain of the Ser | 9e-19 | |
| cd06629 | 272 | cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain o | 9e-19 | |
| cd07848 | 287 | cd07848, STKc_CDKL5, Catalytic domain of the Serin | 2e-18 | |
| cd07852 | 337 | cd07852, STKc_MAPK15, Catalytic domain of the Seri | 3e-18 | |
| cd08228 | 267 | cd08228, STKc_Nek6, Catalytic domain of the Protei | 4e-18 | |
| cd08528 | 269 | cd08528, STKc_Nek10, Catalytic domain of the Prote | 6e-18 | |
| cd08229 | 267 | cd08229, STKc_Nek7, Catalytic domain of the Protei | 8e-18 | |
| cd07853 | 372 | cd07853, STKc_NLK, Catalytic domain of the Serine/ | 1e-17 | |
| cd06644 | 292 | cd06644, STKc_STK10_LOK, Catalytic domain of the P | 2e-17 | |
| cd06630 | 268 | cd06630, STKc_MEKK1, Catalytic domain of the Prote | 2e-17 | |
| cd06624 | 268 | cd06624, STKc_ASK, Catalytic domain of the Protein | 3e-17 | |
| cd06646 | 267 | cd06646, STKc_MAP4K5, Catalytic domain of the Prot | 1e-16 | |
| cd05038 | 284 | cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai | 1e-16 | |
| cd07837 | 295 | cd07837, STKc_CdkB_plant, Catalytic domain of the | 2e-16 | |
| cd07860 | 284 | cd07860, STKc_CDK2_3, Catalytic domain of the Seri | 2e-16 | |
| cd07865 | 310 | cd07865, STKc_CDK9, Catalytic domain of the Serine | 3e-16 | |
| cd07863 | 288 | cd07863, STKc_CDK4, Catalytic domain of the Serine | 3e-16 | |
| cd06643 | 282 | cd06643, STKc_SLK, Catalytic domain of the Protein | 5e-16 | |
| cd00192 | 262 | cd00192, PTKc, Catalytic domain of Protein Tyrosin | 6e-16 | |
| cd07839 | 284 | cd07839, STKc_CDK5, Catalytic domain of the Serine | 2e-15 | |
| cd07866 | 311 | cd07866, STKc_BUR1, Catalytic domain of the Serine | 2e-15 | |
| TIGR03903 | 1266 | TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclas | 2e-15 | |
| pfam07714 | 258 | pfam07714, Pkinase_Tyr, Protein tyrosine kinase | 2e-15 | |
| cd06619 | 279 | cd06619, PKc_MKK5, Catalytic domain of the dual-sp | 3e-15 | |
| cd06618 | 296 | cd06618, PKc_MKK7, Catalytic domain of the dual-sp | 6e-15 | |
| cd06620 | 284 | cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of | 1e-14 | |
| cd07876 | 359 | cd07876, STKc_JNK2, Catalytic domain of the Serine | 2e-14 | |
| cd06638 | 286 | cd06638, STKc_myosinIIIA, Catalytic domain of the | 3e-14 | |
| PRK13184 | 932 | PRK13184, pknD, serine/threonine-protein kinase; R | 1e-13 | |
| PTZ00266 | 1021 | PTZ00266, PTZ00266, NIMA-related protein kinase; P | 2e-13 | |
| cd06615 | 308 | cd06615, PKc_MEK, Catalytic domain of the dual-spe | 2e-13 | |
| PHA03390 | 267 | PHA03390, pk1, serine/threonine-protein kinase 1; | 3e-13 | |
| cd06639 | 291 | cd06639, STKc_myosinIIIB, Catalytic domain of the | 3e-13 | |
| cd07880 | 343 | cd07880, STKc_p38gamma_MAPK12, Catalytic domain of | 3e-13 | |
| cd07873 | 301 | cd07873, STKc_PCTAIRE1, Catalytic domain of the Se | 1e-12 | |
| cd05084 | 252 | cd05084, PTKc_Fes, Catalytic domain of the Protein | 1e-12 | |
| cd08216 | 314 | cd08216, PK_STRAD, Pseudokinase domain of STE20-re | 1e-12 | |
| cd07874 | 355 | cd07874, STKc_JNK3, Catalytic domain of the Serine | 1e-12 | |
| cd07844 | 291 | cd07844, STKc_PCTAIRE_like, Catalytic domain of PC | 2e-12 | |
| cd07879 | 342 | cd07879, STKc_p38delta_MAPK13, Catalytic domain of | 3e-12 | |
| cd07870 | 291 | cd07870, STKc_PFTAIRE2, Catalytic domain of the Se | 4e-12 | |
| PHA03209 | 357 | PHA03209, PHA03209, serine/threonine kinase US3; P | 5e-12 | |
| cd07872 | 309 | cd07872, STKc_PCTAIRE2, Catalytic domain of the Se | 6e-12 | |
| cd07871 | 288 | cd07871, STKc_PCTAIRE3, Catalytic domain of the Se | 7e-12 | |
| cd07877 | 345 | cd07877, STKc_p38alpha_MAPK14, Catalytic domain of | 9e-12 | |
| COG5126 | 160 | COG5126, FRQ1, Ca2+-binding protein (EF-Hand super | 1e-11 | |
| cd05610 | 669 | cd05610, STKc_MASTL, Catalytic domain of the Prote | 1e-11 | |
| cd07878 | 343 | cd07878, STKc_p38beta_MAPK11, Catalytic domain of | 2e-11 | |
| cd05610 | 669 | cd05610, STKc_MASTL, Catalytic domain of the Prote | 3e-11 | |
| cd00051 | 63 | cd00051, EFh, EF-hand, calcium binding motif; A di | 3e-11 | |
| cd06650 | 333 | cd06650, PKc_MEK1, Catalytic domain of the dual-sp | 5e-11 | |
| PTZ00036 | 440 | PTZ00036, PTZ00036, glycogen synthase kinase; Prov | 5e-11 | |
| cd06637 | 272 | cd06637, STKc_TNIK, Catalytic domain of the Protei | 8e-11 | |
| cd05041 | 251 | cd05041, PTKc_Fes_like, Catalytic domain of Fes-li | 8e-11 | |
| cd06616 | 288 | cd06616, PKc_MKK4, Catalytic domain of the dual-sp | 1e-10 | |
| cd07875 | 364 | cd07875, STKc_JNK1, Catalytic domain of the Serine | 1e-10 | |
| cd05080 | 283 | cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) doma | 2e-10 | |
| cd07868 | 317 | cd07868, STKc_CDK8, Catalytic domain of the Serine | 2e-10 | |
| cd07862 | 290 | cd07862, STKc_CDK6, Catalytic domain of the Serine | 3e-10 | |
| cd06617 | 283 | cd06617, PKc_MKK3_6, Catalytic domain of the dual- | 3e-10 | |
| PTZ00184 | 149 | PTZ00184, PTZ00184, calmodulin; Provisional | 5e-10 | |
| cd05059 | 256 | cd05059, PTKc_Tec_like, Catalytic domain of Tec-li | 6e-10 | |
| cd05065 | 269 | cd05065, PTKc_EphR_B, Catalytic domain of the Prot | 1e-09 | |
| cd06636 | 282 | cd06636, STKc_MAP4K4_6, Catalytic domain of the Pr | 2e-09 | |
| cd06649 | 331 | cd06649, PKc_MEK2, Catalytic domain of the dual-sp | 2e-09 | |
| PTZ00183 | 158 | PTZ00183, PTZ00183, centrin; Provisional | 2e-09 | |
| cd07867 | 317 | cd07867, STKc_CDC2L6, Catalytic domain of Serine/T | 2e-09 | |
| cd05085 | 250 | cd05085, PTKc_Fer, Catalytic domain of the Protein | 2e-09 | |
| cd05066 | 267 | cd05066, PTKc_EphR_A, Catalytic domain of the Prot | 2e-09 | |
| cd07850 | 353 | cd07850, STKc_JNK, Catalytic domain of the Serine/ | 2e-09 | |
| COG5126 | 160 | COG5126, FRQ1, Ca2+-binding protein (EF-Hand super | 4e-09 | |
| cd05079 | 284 | cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) doma | 4e-09 | |
| cd05112 | 256 | cd05112, PTKc_Itk, Catalytic domain of the Protein | 8e-09 | |
| cd05114 | 256 | cd05114, PTKc_Tec_Rlk, Catalytic domain of the Pro | 1e-08 | |
| cd05148 | 261 | cd05148, PTKc_Srm_Brk, Catalytic domain of the Pro | 2e-08 | |
| PHA03211 | 461 | PHA03211, PHA03211, serine/threonine kinase US3; P | 2e-08 | |
| PHA03210 | 501 | PHA03210, PHA03210, serine/threonine kinase US3; P | 3e-08 | |
| cd05056 | 270 | cd05056, PTKc_FAK, Catalytic domain of the Protein | 4e-08 | |
| PHA03212 | 391 | PHA03212, PHA03212, serine/threonine kinase US3; P | 4e-08 | |
| cd05068 | 261 | cd05068, PTKc_Frk_like, Catalytic domain of Fyn-re | 4e-08 | |
| cd05576 | 237 | cd05576, STKc_RPK118_like, Catalytic domain of the | 4e-08 | |
| cd05039 | 256 | cd05039, PTKc_Csk_like, Catalytic domain of C-term | 7e-08 | |
| cd07869 | 303 | cd07869, STKc_PFTAIRE1, Catalytic domain of the Se | 7e-08 | |
| cd05034 | 261 | cd05034, PTKc_Src_like, Catalytic domain of Src ki | 8e-08 | |
| cd05071 | 262 | cd05071, PTKc_Src, Catalytic domain of the Protein | 1e-07 | |
| cd05055 | 302 | cd05055, PTKc_PDGFR, Catalytic domain of the Prote | 1e-07 | |
| cd05052 | 263 | cd05052, PTKc_Abl, Catalytic domain of the Protein | 1e-07 | |
| cd05083 | 254 | cd05083, PTKc_Chk, Catalytic domain of the Protein | 2e-07 | |
| PHA03207 | 392 | PHA03207, PHA03207, serine/threonine kinase US3; P | 2e-07 | |
| cd05081 | 284 | cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) | 3e-07 | |
| cd05058 | 262 | cd05058, PTKc_Met_Ron, Catalytic domain of the Pro | 3e-07 | |
| cd05113 | 256 | cd05113, PTKc_Btk_Bmx, Catalytic domain of the Pro | 6e-07 | |
| cd05036 | 277 | cd05036, PTKc_ALK_LTK, Catalytic domain of the Pro | 8e-07 | |
| cd05048 | 283 | cd05048, PTKc_Ror, Catalytic Domain of the Protein | 1e-06 | |
| cd05032 | 277 | cd05032, PTKc_InsR_like, Catalytic domain of Insul | 1e-06 | |
| cd05044 | 269 | cd05044, PTKc_c-ros, Catalytic domain of the Prote | 2e-06 | |
| PTZ00284 | 467 | PTZ00284, PTZ00284, protein kinase; Provisional | 6e-06 | |
| cd05049 | 280 | cd05049, PTKc_Trk, Catalytic domain of the Protein | 7e-06 | |
| pfam13833 | 53 | pfam13833, EF_hand_6, EF-hand domain pair | 9e-06 | |
| cd05070 | 260 | cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Pro | 9e-06 | |
| cd05040 | 257 | cd05040, PTKc_Ack_like, Catalytic domain of the Pr | 2e-05 | |
| pfam13499 | 60 | pfam13499, EF_hand_5, EF-hand domain pair | 2e-05 | |
| cd05094 | 291 | cd05094, PTKc_TrkC, Catalytic domain of the Protei | 2e-05 | |
| cd08227 | 327 | cd08227, PK_STRAD_alpha, Pseudokinase domain of ST | 3e-05 | |
| cd00051 | 63 | cd00051, EFh, EF-hand, calcium binding motif; A di | 4e-05 | |
| cd05082 | 256 | cd05082, PTKc_Csk, Catalytic domain of the Protein | 4e-05 | |
| cd05063 | 268 | cd05063, PTKc_EphR_A2, Catalytic domain of the Pro | 4e-05 | |
| cd05033 | 266 | cd05033, PTKc_EphR, Catalytic domain of Ephrin Rec | 7e-05 | |
| cd05091 | 283 | cd05091, PTKc_Ror2, Catalytic domain of the Protei | 7e-05 | |
| cd05093 | 288 | cd05093, PTKc_TrkB, Catalytic domain of the Protei | 1e-04 | |
| cd05050 | 288 | cd05050, PTKc_Musk, Catalytic domain of the Protei | 1e-04 | |
| cd05053 | 293 | cd05053, PTKc_FGFR, Catalytic domain of the Protei | 2e-04 | |
| cd05092 | 280 | cd05092, PTKc_TrkA, Catalytic domain of the Protei | 2e-04 | |
| cd05089 | 297 | cd05089, PTKc_Tie1, Catalytic domain of the Protei | 2e-04 | |
| smart00750 | 176 | smart00750, KIND, kinase non-catalytic C-lobe doma | 3e-04 | |
| cd05095 | 296 | cd05095, PTKc_DDR2, Catalytic domain of the Protei | 3e-04 | |
| pfam13499 | 60 | pfam13499, EF_hand_5, EF-hand domain pair | 4e-04 | |
| cd05098 | 307 | cd05098, PTKc_FGFR1, Catalytic domain of the Prote | 5e-04 | |
| cd05097 | 295 | cd05097, PTKc_DDR_like, Catalytic domain of Discoi | 6e-04 | |
| PLN03225 | 566 | PLN03225, PLN03225, Serine/threonine-protein kinas | 0.001 | |
| cd05096 | 304 | cd05096, PTKc_DDR1, Catalytic domain of the Protei | 0.001 | |
| cd05109 | 279 | cd05109, PTKc_HER2, Catalytic domain of the Protei | 0.001 | |
| cd05072 | 261 | cd05072, PTKc_Lyn, Catalytic domain of the Protein | 0.001 | |
| PLN03224 | 507 | PLN03224, PLN03224, probable serine/threonine prot | 0.001 | |
| pfam13405 | 30 | pfam13405, EF_hand_4, EF-hand domain | 0.002 | |
| cd05102 | 338 | cd05102, PTKc_VEGFR3, Catalytic domain of the Prot | 0.002 | |
| cd00052 | 67 | cd00052, EH, Eps15 homology domain; found in prote | 0.002 | |
| cd00051 | 63 | cd00051, EFh, EF-hand, calcium binding motif; A di | 0.003 | |
| pfam13405 | 30 | pfam13405, EF_hand_4, EF-hand domain | 0.003 | |
| cd05120 | 155 | cd05120, APH_ChoK_like, Aminoglycoside 3'-phosphot | 0.003 | |
| cd05047 | 270 | cd05047, PTKc_Tie, Catalytic domain of Tie Protein | 0.003 |
| >gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain | Back alignment and domain information |
|---|
Score = 280 bits (719), Expect = 2e-92
Identities = 110/261 (42%), Positives = 151/261 (57%), Gaps = 9/261 (3%)
Query: 25 YFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQP 84
Y LG G FG YL + T + A K I KK + E I REI+I L P
Sbjct: 1 YEILEKLGEGSFGKVYLARDKKTGKLVAIKVIKKKKIKKDRER--ILREIKI-LKKLKHP 57
Query: 85 NVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMG 144
N+V +EDE +++VME CEGGDLFD + +G SE +A LR I++A+ HS G
Sbjct: 58 NIVRLYDVFEDEDKLYLVMEYCEGGDLFDLLKKRGRLSEDEARFYLRQILSALEYLHSKG 117
Query: 145 VMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLRRR-YG 203
++HRDLKPEN + D + +K+ DFG A + G+ VG+ Y+APEVL + YG
Sbjct: 118 IVHRDLKPENI-LLDEDGH--VKLADFGLARQLDPGEKLTTFVGTPEYMAPEVLLGKGYG 174
Query: 204 KEIDIWSAGVILYILLSGVPPFWA-ETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRR 262
K +DIWS GVILY LL+G PPF + + I + + F W IS AKDL+R+
Sbjct: 175 KAVDIWSLGVILYELLTGKPPFPGDDQLLELFKKIGKPKPPFPPPEWD-ISPEAKDLIRK 233
Query: 263 MLTKDPKRRITAAQVLEHPWL 283
+L KDP++R+TA + L+HP+
Sbjct: 234 LLVKDPEKRLTAEEALQHPFF 254
|
Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254 |
| >gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain | Back alignment and domain information |
|---|
Score = 271 bits (695), Expect = 1e-88
Identities = 104/265 (39%), Positives = 145/265 (54%), Gaps = 11/265 (4%)
Query: 25 YFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQP 84
Y R LG G FG Y T + A K + KK + ++ RREI+I LS P
Sbjct: 1 YELLRKLGSGSFGTVYKAKHKGTGKIVAVKIL-KKRSEKSKKDQTARREIRILRRLSH-P 58
Query: 85 NVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMG 144
N+V +ED+ +++VME CEGGDLFD + G SE +A + I+ + HS G
Sbjct: 59 NIVRLIDAFEDKDHLYLVMEYCEGGDLFDYLSRGGPLSEDEAKKIALQILRGLEYLHSNG 118
Query: 145 VMHRDLKPENFSFISRDDNALLKVTDFGSALLFEE-GQVYRDIVGSGFYIAPEVLR--RR 201
++HRDLKPEN + + +K+ DFG A + VG+ +Y+APEVL
Sbjct: 119 IIHRDLKPENI-LLDENGV--VKIADFGLAKKLLKSSSSLTTFVGTPWYMAPEVLLGGNG 175
Query: 202 YGKEIDIWSAGVILYILLSGVPPFWAE---TKKGTYDAILQGEIDFDTDPWPSISSTAKD 258
YG ++D+WS GVILY LL+G PPF E + IL ++FD W S S AKD
Sbjct: 176 YGPKVDVWSLGVILYELLTGKPPFSGENILDQLQLIRRILGPPLEFDEPKWSSGSEEAKD 235
Query: 259 LVRRMLTKDPKRRITAAQVLEHPWL 283
L+++ L KDP +R TA ++L+HPW
Sbjct: 236 LIKKCLNKDPSKRPTAEEILQHPWF 260
|
Length = 260 |
| >gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 202 bits (516), Expect = 4e-62
Identities = 92/257 (35%), Positives = 140/257 (54%), Gaps = 13/257 (5%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFK 90
LG+G FG L + T + YA K + KK ++ E + E I L P +V+
Sbjct: 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNI-LSRINHPFIVKLH 59
Query: 91 STYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDL 150
++ E +++V+E GG+LF + +G SE A IV A+ HS+G+++RDL
Sbjct: 60 YAFQTEEKLYLVLEYAPGGELFSHLSKEGRFSEERARFYAAEIVLALEYLHSLGIIYRDL 119
Query: 151 KPENFSFISRDDNALLKVTDFG-SALLFEEGQVYRDIVGSGFYIAPEVLRRR-YGKEIDI 208
KPEN D + +K+TDFG + L EG G+ Y+APEVL + YGK +D
Sbjct: 120 KPENILL---DADGHIKLTDFGLAKELSSEGSRTNTFCGTPEYLAPEVLLGKGYGKAVDW 176
Query: 209 WSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKDP 268
WS GV+LY +L+G PPF+AE +K Y+ IL+ + F +S A+DL+ +L KDP
Sbjct: 177 WSLGVLLYEMLTGKPPFYAEDRKEIYEKILKDPLRFP----EFLSPEARDLISGLLQKDP 232
Query: 269 KRRIT---AAQVLEHPW 282
+R+ A ++ HP+
Sbjct: 233 TKRLGSGGAEEIKAHPF 249
|
Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250 |
| >gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases | Back alignment and domain information |
|---|
Score = 187 bits (478), Expect = 5e-57
Identities = 90/255 (35%), Positives = 130/255 (50%), Gaps = 44/255 (17%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFK 90
LG G FG YL + T + A K I K+ L E + REI+I L+ PN+V+
Sbjct: 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLE--ELLREIEILKKLNH-PNIVKLY 57
Query: 91 STYEDETAVHVVMELCEGGDLFDRIIAKGYN-SERDAATVLRAIVNAVNVCHSMGVMHRD 149
+EDE +++VME CEGG L D + SE + +L I+ + HS G++HRD
Sbjct: 58 GVFEDENHLYLVMEYCEGGSLKDLLKENEGKLSEDEILRILLQILEGLEYLHSNGIIHRD 117
Query: 150 LKPENFSFISRDDNALLKVTDFGSA-LLFEEGQVYRDIVGSGFYIAPEVLRRR--YGKEI 206
LKPEN + D+ +K+ DFG + LL + + + IVG+ Y+APEVL + Y ++
Sbjct: 118 LKPENI-LLDSDNG-KVKLADFGLSKLLTSDKSLLKTIVGTPAYMAPEVLLGKGYYSEKS 175
Query: 207 DIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTK 266
DIWS GVILY E+ KDL+R+ML K
Sbjct: 176 DIWSLGVILY------------------------ELPE-----------LKDLIRKMLQK 200
Query: 267 DPKRRITAAQVLEHP 281
DP++R +A ++LEH
Sbjct: 201 DPEKRPSAKEILEHL 215
|
Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215 |
| >gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase | Back alignment and domain information |
|---|
Score = 177 bits (452), Expect = 1e-52
Identities = 79/262 (30%), Positives = 133/262 (50%), Gaps = 20/262 (7%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQ--PNV 86
+ +G+G FG YL S + Y K I M E + E++I L PN+
Sbjct: 6 KQIGKGSFGKVYLVRRKSDGKLYVLKEIDLS-NMSEKEREDALNEVKI---LKKLNHPNI 61
Query: 87 VEFKSTYEDETAVHVVMELCEGGDLFDRI----IAKGYNSERDAATVLRAIVNAVNVCHS 142
+++ ++E++ + +VME +GGDL +I E + A+ HS
Sbjct: 62 IKYYESFEEKGKLCIVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHS 121
Query: 143 MGVMHRDLKPENFSFISRDDNALLKVTDFG-SALLFEEGQVYRDIVGSGFYIAPEVLRRR 201
++HRD+KP+N F++ + L+K+ DFG S +L + + +VG+ +Y++PE+ + +
Sbjct: 122 RKILHRDIKPQNI-FLTSNG--LVKLGDFGISKVLSSTVDLAKTVVGTPYYLSPELCQNK 178
Query: 202 -YGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTA-KDL 259
Y + DIWS G +LY L + PF E IL+G+ P PS S+ ++L
Sbjct: 179 PYNYKSDIWSLGCVLYELCTLKHPFEGENLLELALKILKGQY----PPIPSQYSSELRNL 234
Query: 260 VRRMLTKDPKRRITAAQVLEHP 281
V +L KDP+ R + AQ+L+ P
Sbjct: 235 VSSLLQKDPEERPSIAQILQSP 256
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258 |
| >gnl|CDD|173670 cd05579, STKc_MAST_like, Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins | Back alignment and domain information |
|---|
Score = 177 bits (452), Expect = 1e-52
Identities = 91/266 (34%), Positives = 138/266 (51%), Gaps = 19/266 (7%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFK 90
+ +G +G +L + ST YA K I K +R + D + E I P VV+
Sbjct: 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQS-PYVVKLY 59
Query: 91 STYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDL 150
+++ + +++VME GGDL + G E A + IV A+ HS G++HRDL
Sbjct: 60 YSFQGKKNLYLVMEYLPGGDLASLLENVGSLDEDVARIYIAEIVLALEYLHSNGIIHRDL 119
Query: 151 KPENFSFISRDDNALLKVTDFG-SALLFEEGQVY--------RDIVGSGFYIAPEVLRRR 201
KP+N I D N LK+TDFG S + Q+ + IVG+ YIAPEV+ +
Sbjct: 120 KPDN---ILIDSNGHLKLTDFGLSKVGLVRRQINLNDDEKEDKRIVGTPDYIAPEVILGQ 176
Query: 202 -YGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLV 260
+ K +D WS G ILY L G+PPF ET + + IL G+I++ D +S A DL+
Sbjct: 177 GHSKTVDWWSLGCILYEFLVGIPPFHGETPEEIFQNILNGKIEWPED--VEVSDEAIDLI 234
Query: 261 RRMLTKDPKRRITAA---QVLEHPWL 283
++L DP++R+ A ++ HP+
Sbjct: 235 SKLLVPDPEKRLGAKSIEEIKNHPFF 260
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert relative to other kinases. The fungal kinases in this subfamily harbor other domains in addition to a central catalytic domain, which also contains an insert relative to MAST kinases like MASTL. Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. The fungal proteins Rim15 and cek1 are involved in the regulation of meiosis and mitosis, respectively. Length = 265 |
| >gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1 | Back alignment and domain information |
|---|
Score = 177 bits (450), Expect = 4e-52
Identities = 82/284 (28%), Positives = 140/284 (49%), Gaps = 33/284 (11%)
Query: 25 YFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQP 84
+ FG+++G G F L E TN+ YA K + K+ ++ + ++ E ++ L+G P
Sbjct: 3 FKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHP 62
Query: 85 NVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMG 144
+++ T++DE ++ V+E G+L I G E+ I+ A+ HS G
Sbjct: 63 GIIKLYYTFQDEENLYFVLEYAPNGELLQYIRKYGSLDEKCTRFYAAEILLALEYLHSKG 122
Query: 145 VMHRDLKPENFSFISRDDNALLKVTDFGSA-----------------LLFEEGQVYRD-- 185
++HRDLKPEN D + +K+TDFG+A + + + R
Sbjct: 123 IIHRDLKPENILL---DKDMHIKITDFGTAKVLDPNSSPESNKGDATNIDSQIEKNRRRF 179
Query: 186 --IVGSGFYIAPEVLRRRY-GKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEI 242
VG+ Y++PE+L + GK D+W+ G I+Y +L+G PPF + T+ IL+ E
Sbjct: 180 ASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNEYLTFQKILKLEY 239
Query: 243 DFDTDPWPSISSTAKDLVRRMLTKDPKRRITA----AQVLEHPW 282
F P+ AKDL+ ++L DP+ R+ ++ HP+
Sbjct: 240 SFP----PNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKAHPF 279
|
Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280 |
| >gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase | Back alignment and domain information |
|---|
Score = 173 bits (440), Expect = 8e-51
Identities = 86/266 (32%), Positives = 132/266 (49%), Gaps = 20/266 (7%)
Query: 28 GRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVV 87
G +LGRG FG YL + T A KS+ + E + + REI+I L PN+V
Sbjct: 5 GELLGRGSFGSVYLALDKDTGELMAVKSV-ELSGDSEEELEALEREIRILSSLQ-HPNIV 62
Query: 88 EFKSTYEDETAVH--VVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGV 145
+ + DE + +E GG L + G E R I+ + HS G+
Sbjct: 63 RYYGSERDEEKNTLNIFLEYVSGGSLSSLLKKFGKLPEPVIRKYTRQILEGLAYLHSNGI 122
Query: 146 MHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVY---RDIVGSGFYIAPEVLRR-R 201
+HRD+K N I D + ++K+ DFG A + + + G+ +++APEV+R
Sbjct: 123 VHRDIKGAN---ILVDSDGVVKLADFGCAKRLGDIETGEGTGSVRGTPYWMAPEVIRGEE 179
Query: 202 YGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSI----SSTAK 257
YG+ DIWS G + + +G PP W+E A+ + I +P P I S AK
Sbjct: 180 YGRAADIWSLGCTVIEMATGKPP-WSELGN-PMAALYK--IGSSGEP-PEIPEHLSEEAK 234
Query: 258 DLVRRMLTKDPKRRITAAQVLEHPWL 283
D +R+ L +DPK+R TA ++L+HP+L
Sbjct: 235 DFLRKCLRRDPKKRPTADELLQHPFL 260
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260 |
| >gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Score = 169 bits (429), Expect = 3e-48
Identities = 98/294 (33%), Positives = 143/294 (48%), Gaps = 28/294 (9%)
Query: 24 HYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQ 83
Y R LG G FG YL + + A K +AKK + + E + REIQI L+
Sbjct: 1 SYRILRKLGEGSFGEVYLARDR---KLVALKVLAKKLESKSKEVERFLREIQILASLNHP 57
Query: 84 PNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYN---SERDAATVLRAIVNAVNVC 140
PN+V+ ++DE ++++VME +GG L D + G SE +A +L I++A+
Sbjct: 58 PNIVKLYDFFQDEGSLYLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYL 117
Query: 141 HSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQV-------YRDIVGSGFYI 193
HS G++HRD+KPEN + D ++K+ DFG A L + VG+ Y+
Sbjct: 118 HSKGIIHRDIKPEN--ILLDRDGRVVKLIDFGLAKLLPDPGSTSSIPALPSTSVGTPGYM 175
Query: 194 APEVLR----RRYGKEIDIWSAGVILYILLSGVPPF----WAETKKGTYDAILQGEIDFD 245
APEVL DIWS G+ LY LL+G+PPF + T IL+
Sbjct: 176 APEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTPSL 235
Query: 246 TDPW-----PSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASDDTS 294
P IS A DL++++L KDPK R++++ L H L D S
Sbjct: 236 ASPLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSHDLLAHLKLKESDLS 289
|
Length = 384 |
| >gnl|CDD|173671 cd05580, STKc_PKA, Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase | Back alignment and domain information |
|---|
Score = 166 bits (423), Expect = 6e-48
Identities = 84/267 (31%), Positives = 143/267 (53%), Gaps = 20/267 (7%)
Query: 27 FGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNV 86
F + LG G FG L + + YA K ++K ++L + + + E +I + P +
Sbjct: 5 FIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIR-HPFL 63
Query: 87 VEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRA-IVNAVNVCHSMGV 145
V +++D++ +++VME GG+LF + G E A A +V A+ HS+ +
Sbjct: 64 VNLYGSFQDDSNLYLVMEYVPGGELFSHLRKSGRFPE-PVARFYAAQVVLALEYLHSLDI 122
Query: 146 MHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLRRR-YGK 204
++RDLKPEN + D + +K+TDFG A +G+ Y + G+ Y+APE++ + YGK
Sbjct: 123 VYRDLKPEN---LLLDSDGYIKITDFGFAK-RVKGRTY-TLCGTPEYLAPEIILSKGYGK 177
Query: 205 EIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPS-ISSTAKDLVRRM 263
+D W+ G+++Y +L+G PPF+ + Y+ IL+G++ F PS S AKDL+R +
Sbjct: 178 AVDWWALGILIYEMLAGYPPFFDDNPIQIYEKILEGKVRF-----PSFFSPDAKDLIRNL 232
Query: 264 LTKDPKRRI-----TAAQVLEHPWLRE 285
L D +R+ + HPW
Sbjct: 233 LQVDLTKRLGNLKNGVNDIKNHPWFAG 259
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubiquitously in cells and interacts with many different downstream targets. It plays a role in the regulation of diverse processes such as growth, development, memory, metabolism, gene expression, immunity, and lipolysis. Length = 290 |
| >gnl|CDD|173664 cd05573, STKc_ROCK_NDR_like, Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 156 bits (397), Expect = 1e-43
Identities = 92/303 (30%), Positives = 141/303 (46%), Gaps = 71/303 (23%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYL--------SG 82
+GRG FG +L + T + YA K + K DMI+R QI +
Sbjct: 9 IGRGAFGEVWLVRDKDTGQVYAMKVLRKS--------DMIKRN-QIAHVRAERDILADAD 59
Query: 83 QPNVVEFKSTYEDETAVHVVMELCEGGDL---------FDRIIAKGYNSERDAATVLRAI 133
P +V+ +++DE +++VME GGDL F A+ Y +E +
Sbjct: 60 SPWIVKLYYSFQDEEHLYLVMEYMPGGDLMNLLIRKDVFPEETARFYIAE---------L 110
Query: 134 VNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEG------------- 180
V A++ H +G +HRD+KP+N I D + +K+ DFG +
Sbjct: 111 VLALDSVHKLGFIHRDIKPDNI-LIDADGH--IKLADFGLCKKMNKAKDREYYLNDSHNL 167
Query: 181 ----------------QVYRD-IVGSGFYIAPEVLRRR-YGKEIDIWSAGVILYILLSGV 222
+V + VG+ YIAPEVLR YG E D WS GVILY +L G
Sbjct: 168 LFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGF 227
Query: 223 PPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAA-QVLEHP 281
PPF+++T + TY+ I+ + P P +S A DL+ R+L DP+ R+ + ++ HP
Sbjct: 228 PPFYSDTLQETYNKIINWKESLRFPPDPPVSPEAIDLICRLLC-DPEDRLGSFEEIKSHP 286
Query: 282 WLR 284
+ +
Sbjct: 287 FFK 289
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Proteins in this subfamily are involved in regulating many cellular functions including contraction, motility, division, proliferation, apoptosis, morphogenesis, and cytokinesis. Length = 350 |
| >gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase | Back alignment and domain information |
|---|
Score = 152 bits (386), Expect = 1e-42
Identities = 89/289 (30%), Positives = 140/289 (48%), Gaps = 48/289 (16%)
Query: 24 HYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDM--IRREIQIRLYLS 81
Y +G G G Y T+ +T + A K KMRL + + I EI I +
Sbjct: 20 LYKNLEKIGEGASGEVYKATDRATGKEVAIK------KMRLRKQNKELIINEILI-MKDC 72
Query: 82 GQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIA--KGYNSERDAATVLRAIVNAVNV 139
PN+V++ +Y + VVME +GG L D II +E A V R ++ +
Sbjct: 73 KHPNIVDYYDSYLVGDELWVVMEYMDGGSLTD-IITQNFVRMNEPQIAYVCREVLQGLEY 131
Query: 140 CHSMGVMHRDLKPENFSFISRDDNALL------KVTDFG-SALLFEEGQVYRDIVGSGFY 192
HS V+HRD+K DN LL K+ DFG +A L +E +VG+ ++
Sbjct: 132 LHSQNVIHRDIK---------SDNILLSKDGSVKLADFGFAAQLTKEKSKRNSVVGTPYW 182
Query: 193 IAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAE---------TKKGTYDAILQGEI 242
+APEV++R YG ++DIWS G++ + G PP+ E T KG L+
Sbjct: 183 MAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLRALFLITTKGIPP--LK--- 237
Query: 243 DFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASD 291
+ + W S KD + + L KDP++R +A ++L+HP+L+++ +
Sbjct: 238 --NPEKW---SPEFKDFLNKCLVKDPEKRPSAEELLQHPFLKKACPKEE 281
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286 |
| >gnl|CDD|173702 cd05611, STKc_Rim15_like, Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 150 bits (380), Expect = 4e-42
Identities = 79/256 (30%), Positives = 121/256 (47%), Gaps = 10/256 (3%)
Query: 33 RGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKST 92
+G FG YL + ST +A K + K + + ++ E I + P V + +
Sbjct: 6 KGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYS 65
Query: 93 YEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKP 152
++ + +++VME GGD I G E A + +V V H G++HRD+KP
Sbjct: 66 FQSKDYLYLVMEYLNGGDCASLIKTLGGLPEDWAKQYIAEVVLGVEDLHQRGIIHRDIKP 125
Query: 153 ENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLRRRYG-KEIDIWSA 211
EN D LK+TDFG L G + VG+ Y+APE + K D WS
Sbjct: 126 ENLLI---DQTGHLKLTDFG---LSRNGLENKKFVGTPDYLAPETILGVGDDKMSDWWSL 179
Query: 212 GVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKDPKRR 271
G +++ L G PPF AET +D IL I++ + S A DL+ R+L DP +R
Sbjct: 180 GCVIFEFLFGYPPFHAETPDAVFDNILSRRINWPEEVKEFCSPEAVDLINRLLCMDPAKR 239
Query: 272 ITA---AQVLEHPWLR 284
+ A ++ HP+ +
Sbjct: 240 LGANGYQEIKSHPFFK 255
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a downstream effector of PKA and regulates entry into stationary phase (G0). Thus, it plays a crucial role in regulating yeast proliferation, differentiation, and aging. Cek1 may facilitate progression of mitotic anaphase. Length = 260 |
| >gnl|CDD|173663 cd05572, STKc_cGK_PKG, Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase | Back alignment and domain information |
|---|
Score = 148 bits (377), Expect = 1e-41
Identities = 84/262 (32%), Positives = 138/262 (52%), Gaps = 18/262 (6%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFK 90
LG G FG L S NR +A K + K+ + + + I E +I L P +V+
Sbjct: 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEI-LEECNHPFIVKLY 59
Query: 91 STYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDL 150
T++D+ ++++ME C GG+L+ + +G E A + +V A H+ G+++RDL
Sbjct: 60 RTFKDKKYIYMLMEYCLGGELWTILRDRGLFDEYTARFYIACVVLAFEYLHNRGIIYRDL 119
Query: 151 KPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEV-LRRRYGKEIDIW 209
KPEN + D N +K+ DFG A + GQ G+ Y+APE+ L + Y +D W
Sbjct: 120 KPENL-LL--DSNGYVKLVDFGFAKKLKSGQKTWTFCGTPEYVAPEIILNKGYDFSVDYW 176
Query: 210 SAGVILYILLSGVPPFWAETKKG---TYDAILQGEIDFDTDPWPS-ISSTAKDLVRRMLT 265
S G++LY LL+G PPF E + Y+ IL+G + +P+ I AKDL++++L
Sbjct: 177 SLGILLYELLTGRPPF-GEDDEDPMEIYNDILKGNGKLE---FPNYIDKAAKDLIKQLLR 232
Query: 266 KDPKRRI-----TAAQVLEHPW 282
++P+ R+ + +H W
Sbjct: 233 RNPEERLGNLKGGIKDIKKHKW 254
|
Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowing autophosphorylation and activation of the kinase. cGKI is a soluble protein expressed in all smooth muscles, platelets, cerebellum, and kidney. It is also expressed at lower concentrations in other tissues. cGKII is a membrane-bound protein that is most abundantly expressed in the intestine. It is also present in the brain nuclei, adrenal cortex, kidney, lung, and prostate. cGKI is involved in the regulation of smooth muscle tone, smooth cell proliferation, and platelet activation. cGKII plays a role in the regulation of secretion, such as renin secretion by the kidney and aldosterone secretion by the adrenal. It also regulates bone growth and the circadian rhythm. Length = 262 |
| >gnl|CDD|173669 cd05578, STKc_Yank1, Catalytic domain of the Protein Serine/Threonine Kinase, Yank1 | Back alignment and domain information |
|---|
Score = 145 bits (367), Expect = 2e-40
Identities = 74/263 (28%), Positives = 127/263 (48%), Gaps = 8/263 (3%)
Query: 24 HYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQ 83
H+ R++G+G FG + + T + +A K + K+ + + E +I L+
Sbjct: 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELN-H 59
Query: 84 PNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSM 143
P +V +++DE +++V++L GGDL + K SE + IV A+ HS
Sbjct: 60 PFLVNLWYSFQDEENMYLVVDLLLGGDLRYHLSQKVKFSEEQVKFWICEIVLALEYLHSK 119
Query: 144 GVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLRRR-Y 202
G++HRD+KP+N I D+ + +TDF A + G+ Y+APEVL R+ Y
Sbjct: 120 GIIHRDIKPDN---ILLDEQGHVHITDFNIATKVTPDTLTTSTSGTPGYMAPEVLCRQGY 176
Query: 203 GKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRR 262
+D WS GV Y L G P+ ++ D I + D + S+ A D + +
Sbjct: 177 SVAVDWWSLGVTAYECLRGKRPYRGHSRTIR-DQIRAKQETADVLYPATWSTEAIDAINK 235
Query: 263 MLTKDPKRRI--TAAQVLEHPWL 283
+L +DP++R+ + HP+
Sbjct: 236 LLERDPQKRLGDNLKDLKNHPYF 258
|
Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. Length = 258 |
| >gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases | Back alignment and domain information |
|---|
Score = 145 bits (367), Expect = 3e-40
Identities = 76/261 (29%), Positives = 123/261 (47%), Gaps = 20/261 (7%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVE 88
+G+G FG Y T + A K I + K + + I EIQI PN+V+
Sbjct: 6 EKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEK---IINEIQILKKCK-HPNIVK 61
Query: 89 FKSTYEDETAVHVVMELCEGGDLFDRIIAKGYN---SERDAATVLRAIVNAVNVCHSMGV 145
+ +Y + + +VME C GG L D + K N +E A V + ++ + HS G+
Sbjct: 62 YYGSYLKKDELWIVMEFCSGGSLKD--LLKSTNQTLTESQIAYVCKELLKGLEYLHSNGI 119
Query: 146 MHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLRR-RYGK 204
+HRD+K N I + +K+ DFG + + + +VG+ +++APEV+ Y
Sbjct: 120 IHRDIKAAN---ILLTSDGEVKLIDFGLSAQLSDTKARNTMVGTPYWMAPEVINGKPYDY 176
Query: 205 EIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQ--GEIDFDTDPWPSISST-AKDLVR 261
+ DIWS G+ L G PP+ + L P S KD ++
Sbjct: 177 KADIWSLGITAIELAEGKPPY----SELPPMKALFKIATNGPPGLRNPEKWSDEFKDFLK 232
Query: 262 RMLTKDPKRRITAAQVLEHPW 282
+ L K+P++R TA Q+L+HP+
Sbjct: 233 KCLQKNPEKRPTAEQLLKHPF 253
|
Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253 |
| >gnl|CDD|173733 cd07829, STKc_CDK_like, Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 144 bits (367), Expect = 5e-40
Identities = 78/289 (26%), Positives = 123/289 (42%), Gaps = 49/289 (16%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRL-AENDMIR----REIQIRLYLSGQPN 85
LG G +GV Y + T A K K+RL E + I REI + L PN
Sbjct: 7 LGEGTYGVVYKARDKKTGEIVALK------KIRLDNEEEGIPSTALREISLLKELK-HPN 59
Query: 86 VVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATV---LRAIVNAVNVCHS 142
+V+ E +++V E C+ DL + + + ++ + CHS
Sbjct: 60 IVKLLDVIHTERKLYLVFEYCDM-DL--KKYLDKRPGPLSPNLIKSIMYQLLRGLAYCHS 116
Query: 143 MGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFE-EGQVYRDIVGSGFYIAPEVL--R 199
++HRDLKP+N I+RD LK+ DFG A F + Y V + +Y APE+L
Sbjct: 117 HRILHRDLKPQNI-LINRDGV--LKLADFGLARAFGIPLRTYTHEVVTLWYRAPEILLGS 173
Query: 200 RRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQ----------------GEID 243
+ Y +DIWS G I +++G P F +++ I Q +
Sbjct: 174 KHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVTKLPDYK 233
Query: 244 FDTDPW---------PSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWL 283
+ P + DL+ +ML +P +RI+A + L+HP+
Sbjct: 234 PTFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALKHPYF 282
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the early G1 phase by CDK4 or CDK6, the G1/S phase transition by CDK2, or the entry of mitosis by CDK1. They also exhibit overlapping cyclin specificity and functions in certain conditions. Knockout mice with a single CDK deleted remain viable with specific phenotypes, showing that some CDKs can compensate for each other. For example, CDK4 can compensate for the loss of CDK6, however, double knockout mice with both CDK4 and CDK6 deleted die in utero. CDK8 and CDK9 are mainly involved in transcription while CDK5 is implicated in neuronal function. CDK7 plays essential roles in both the cell cycle as a CDK-Activating Kinase (CAK) and in transcription as a component of the general transcription factor TFIIH. Length = 282 |
| >gnl|CDD|173736 cd07832, STKc_CCRK, Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase | Back alignment and domain information |
|---|
Score = 143 bits (364), Expect = 1e-39
Identities = 87/300 (29%), Positives = 127/300 (42%), Gaps = 57/300 (19%)
Query: 25 YFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAEN--DMIRREIQIRLYLSG 82
Y +G G G+ + + T A K +A + RL + REI+ L
Sbjct: 2 YKILGRIGEGAHGIVFKAKDRETGETVALKKVALR---RLEGGIPNQALREIKA-LQACQ 57
Query: 83 QPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYN---SERDAATVLRAIVNAVNV 139
P VV+ + + +VME DL + + + E + +R ++ V
Sbjct: 58 HPYVVKLLDVFPHGSGFVLVMEYM-PSDLSEVL--RDEERPLPEAQVKSYMRMLLKGVAY 114
Query: 140 CHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLF--EEGQVYRDIVGSGFYIAPEV 197
H+ G+MHRDLKP N IS D LK+ DFG A LF EE ++Y V + +Y APE+
Sbjct: 115 MHANGIMHRDLKPANL-LISADGV--LKIADFGLARLFSEEEPRLYSHQVATRWYRAPEL 171
Query: 198 L--RRRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDT--------- 246
L R+Y +D+W+ G I LL+G P F E I Q I F T
Sbjct: 172 LYGARKYDPGVDLWAVGCIFAELLNGSPLFPGEND------IEQLAIVFRTLGTPNEETW 225
Query: 247 -------------------DPW----PSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWL 283
P P S A DL++ +L DP +R++AA+ L HP+
Sbjct: 226 PGLTSLPDYNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRHPYF 285
|
Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of heart failure. Length = 286 |
| >gnl|CDD|132979 cd06648, STKc_PAK_II, Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase | Back alignment and domain information |
|---|
Score = 137 bits (346), Expect = 5e-37
Identities = 89/271 (32%), Positives = 145/271 (53%), Gaps = 29/271 (10%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACK--SIAKKPKMRLAENDM-IRREIQIRLYLSGQPNVV 87
+G G G+ + T+ ST R A K + K+ + L N++ I R+ Q PN+V
Sbjct: 27 IGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQ-------HPNIV 79
Query: 88 EFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMH 147
E S+Y + VVME EGG L D I+ +E ATV A++ A++ H+ GV+H
Sbjct: 80 EMYSSYLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIATVCLAVLKALSFLHAQGVIH 138
Query: 148 RDLKPENFSFISRDDNALLKVTDFG-SALLFEEGQVYRDIVGSGFYIAPEVLRRR-YGKE 205
RD+K ++ ++ D K++DFG A + +E + +VG+ +++APEV+ R YG E
Sbjct: 139 RDIKSDSI-LLTSDGRV--KLSDFGFCAQVSKEVPRRKSLVGTPYWMAPEVISRLPYGTE 195
Query: 206 IDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWP------SISSTAKDL 259
+DIWS G+++ ++ G PP++ E LQ + P +S +
Sbjct: 196 VDIWSLGIMVIEMVDGEPPYFNEPP-------LQAMKRIRDNLPPKLKNLHKVSPRLRSF 248
Query: 260 VRRMLTKDPKRRITAAQVLEHPWLRESGEAS 290
+ RML +DP +R TAA++L HP+L ++G S
Sbjct: 249 LDRMLVRDPAQRATAAELLNHPFLAKAGPPS 279
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs found in group I PAKs, such as an AID (autoinhibitory domain) and SH3 binding sites. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. While group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX, no such binding has been demonstrated for group II PAKs. Some known substrates of group II PAKs are also substrates of group I PAKs such as Raf, BAD, LIMK and GEFH1. Unique group II substrates include MARK/Par-1 and PDZ-RhoGEF. Group II PAKs play important roles in filopodia formation, neuron extension, cytoskeletal organization, and cell survival. Length = 285 |
| >gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 135 bits (343), Expect = 7e-37
Identities = 82/268 (30%), Positives = 125/268 (46%), Gaps = 22/268 (8%)
Query: 24 HYFFGRMLGRGQFGVSYLCTENSTNRPYACKSI--AKKPKMRLAENDMIRREIQIRLYLS 81
+Y G ++GRG FGV Y T A K I K + L I +EI + L
Sbjct: 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKS---IMQEIDLLKNLK 57
Query: 82 GQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCH 141
PN+V++ + E ++++++E E G L I G E A + ++ + H
Sbjct: 58 -HPNIVKYIGSIETSDSLYIILEYAENGSLRQIIKKFGPFPESLVAVYVYQVLQGLAYLH 116
Query: 142 SMGVMHRDLKPENFSFISRDDNALLKVTDFGSAL-LFEEGQVYRDIVGSGFYIAPEVLRR 200
GV+HRD+K N ++D K+ DFG A L + + +VG+ +++APEV+
Sbjct: 117 EQGVIHRDIKAANI-LTTKDGVV--KLADFGVATKLNDVSKDDASVVGTPYWMAPEVIE- 172
Query: 201 RYGKEI----DIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPS-ISST 255
DIWS G + LL+G PP++ I+Q D P P IS
Sbjct: 173 --MSGASTASDIWSLGCTVIELLTGNPPYYDLNPMAALFRIVQD----DHPPLPEGISPE 226
Query: 256 AKDLVRRMLTKDPKRRITAAQVLEHPWL 283
KD + + KDP R TA Q+L+HPW+
Sbjct: 227 LKDFLMQCFQKDPNLRPTAKQLLKHPWI 254
|
Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254 |
| >gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins | Back alignment and domain information |
|---|
Score = 135 bits (342), Expect = 1e-36
Identities = 74/262 (28%), Positives = 123/262 (46%), Gaps = 16/262 (6%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIA--KKPKMRLAENDMIRREIQIRLYLSGQPNVVE 88
LG+G GV Y T + YA K I + R + RE++ L P VV+
Sbjct: 9 LGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQ----LLRELKT-LRSCESPYVVK 63
Query: 89 FKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSM-GVMH 147
+ E + +V+E +GG L D + G E A + R I+ ++ H+ ++H
Sbjct: 64 CYGAFYKEGEISIVLEYMDGGSLADLLKKVGKIPEPVLAYIARQILKGLDYLHTKRHIIH 123
Query: 148 RDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRD-IVGSGFYIAPEVLR-RRYGKE 205
RD+KP N I+ K+ DFG + + E + VG+ Y++PE ++ Y
Sbjct: 124 RDIKPSNL-LINSKGEV--KIADFGISKVLENTLDQCNTFVGTVTYMSPERIQGESYSYA 180
Query: 206 IDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPS--ISSTAKDLVRRM 263
DIWS G+ L G PF + ++ ++Q D P+ S +D +
Sbjct: 181 ADIWSLGLTLLECALGKFPF-LPPGQPSFFELMQAICDGPPPSLPAEEFSPEFRDFISAC 239
Query: 264 LTKDPKRRITAAQVLEHPWLRE 285
L KDPK+R +AA++L+HP++++
Sbjct: 240 LQKDPKKRPSAAELLQHPFIKK 261
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264 |
| >gnl|CDD|173703 cd05612, STKc_PRKX_like, Catalytic domain of PRKX-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 135 bits (342), Expect = 2e-36
Identities = 78/264 (29%), Positives = 135/264 (51%), Gaps = 24/264 (9%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFK 90
+G G FG +L + + YA K +A +RL + + E ++ +S P ++
Sbjct: 9 VGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVS-HPFIIRLF 67
Query: 91 STYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDL 150
T D+ ++++ME GG+LF + G S IV A+ HS +++RDL
Sbjct: 68 WTEHDQRFLYMLMEYVPGGELFSYLRNSGRFSNSTGLFYASEIVCALEYLHSKEIVYRDL 127
Query: 151 KPENFSFISRDDNALLKVTDFGSALLFEEGQVYRD----IVGSGFYIAPEVLRRR-YGKE 205
KPEN + ++ + +K+TDFG A + RD + G+ Y+APEV++ + + K
Sbjct: 128 KPENI-LLDKEGH--IKLTDFGFA------KKLRDRTWTLCGTPEYLAPEVIQSKGHNKA 178
Query: 206 IDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLT 265
+D W+ G+++Y +L G PPF+ + G Y+ IL G+++F + AKDL++++L
Sbjct: 179 VDWWALGILIYEMLVGYPPFFDDNPFGIYEKILAGKLEFPR----HLDLYAKDLIKKLLV 234
Query: 266 KDPKRRI-----TAAQVLEHPWLR 284
D RR+ A V H W +
Sbjct: 235 VDRTRRLGNMKNGADDVKNHRWFK 258
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyte/macrophage lineage differentiation, renal cell epithelial migration, and tubular morphogenesis in the developing kidney. Length = 291 |
| >gnl|CDD|173687 cd05596, STKc_ROCK, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase | Back alignment and domain information |
|---|
Score = 137 bits (346), Expect = 3e-36
Identities = 87/268 (32%), Positives = 141/268 (52%), Gaps = 20/268 (7%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVE 88
+++GRG FG L S+ + YA K ++K ++ +++ E I + + +V+
Sbjct: 49 KVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAH-ANSEWIVQ 107
Query: 89 FKSTYEDETAVHVVMELCEGGDLFDRIIAKGYN-SERDAATVLRAIVNAVNVCHSMGVMH 147
++D+ +++VME GGDL + + Y+ E+ A +V A++ HSMG +H
Sbjct: 108 LHYAFQDDKYLYMVMEYMPGGDLVN--LMSNYDIPEKWARFYTAEVVLALDAIHSMGFIH 165
Query: 148 RDLKPENFSFISRDDNALLKVTDFGSAL-LFEEGQVYRDI-VGSGFYIAPEVLRRR---- 201
RD+KP+N D + LK+ DFG+ + + G V D VG+ YI+PEVL+ +
Sbjct: 166 RDVKPDNMLL---DKSGHLKLADFGTCMKMDANGMVRCDTAVGTPDYISPEVLKSQGGDG 222
Query: 202 -YGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAIL--QGEIDFDTDPWPSISSTAKD 258
YG+E D WS GV LY +L G PF+A++ GTY I+ + + F D IS AKD
Sbjct: 223 YYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMDHKNSLTFPDD--IEISKQAKD 280
Query: 259 LVRRMLTKDPKR--RITAAQVLEHPWLR 284
L+ LT R R ++ HP+ +
Sbjct: 281 LICAFLTDREVRLGRNGVDEIKSHPFFK 308
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via interaction with Rho GTPases and is involved in many cellular functions including contraction, adhesion, migration, motility, proliferation, and apoptosis. The ROCK subfamily consists of two isoforms, ROCK1 and ROCK2, which may be functionally redundant in some systems, but exhibit different tissue distributions. Both isoforms are ubiquitously expressed in most tissues, but ROCK2 is more prominent in brain and skeletal muscle while ROCK1 is more pronounced in the liver, testes, and kidney. Studies in knockout mice result in different phenotypes, suggesting that the two isoforms do not compensate for each other during embryonic development. Length = 370 |
| >gnl|CDD|143333 cd05118, STKc_CMGC, Catalytic domain of CMGC family Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 133 bits (338), Expect = 6e-36
Identities = 79/286 (27%), Positives = 122/286 (42%), Gaps = 42/286 (14%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFK 90
+G G +GV Y + T A K I K REI++ L+ PN+++
Sbjct: 7 IGEGTYGVVYKARDKLTGEIVAIKKI-KLRFESEGIPKTALREIKLLKELN-HPNIIKLL 64
Query: 91 STYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATV---LRAIVNAVNVCHSMGVMH 147
+ + +++V E + DL+ I K + + L ++ + CHS G++H
Sbjct: 65 DVFRHKGDLYLVFEFMDT-DLYKLI--KDRQRGLPESLIKSYLYQLLQGLAFCHSHGILH 121
Query: 148 RDLKPENFSFISRDDNALLKVTDFGSALLFE-EGQVYRDIVGSGFYIAPEVL--RRRYGK 204
RDLKPEN + + +LK+ DFG A F + Y V + +Y APE+L + Y
Sbjct: 122 RDLKPEN---LLINTEGVLKLADFGLARSFGSPVRPYTHYVVTRWYRAPELLLGDKGYST 178
Query: 205 EIDIWSAGVILYILLSGVPPF-----------------------WAETKKGTYDAIL--- 238
+DIWS G I LLS P F W + +
Sbjct: 179 PVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKFTSLARNYKFSFP 238
Query: 239 -QGEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWL 283
+ + +P+ S A DL+ +ML DP +RITA Q L HP+
Sbjct: 239 KKAGMPLPK-LFPNASPQALDLLSQMLHYDPHKRITAEQALAHPYF 283
|
Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Length = 283 |
| >gnl|CDD|140289 PTZ00263, PTZ00263, protein kinase A catalytic subunit; Provisional | Back alignment and domain information |
|---|
Score = 133 bits (336), Expect = 4e-35
Identities = 84/273 (30%), Positives = 138/273 (50%), Gaps = 34/273 (12%)
Query: 28 GRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVV 87
G LG G FG + T YA K + K+ +++ + + +E I + LS P +V
Sbjct: 23 GETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELS-HPFIV 81
Query: 88 EFKSTYEDETAVHVVMELCEGGDLFDRI---------IAKGYNSERDAATVLRAIVNAVN 138
+++DE V+ ++E GG+LF + +AK Y++E +V A
Sbjct: 82 NMMCSFQDENRVYFLLEFVVGGELFTHLRKAGRFPNDVAKFYHAE---------LVLAFE 132
Query: 139 VCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVL 198
HS +++RDLKPEN + D+ +KVTDFG A + + + + G+ Y+APEV+
Sbjct: 133 YLHSKDIIYRDLKPEN---LLLDNKGHVKVTDFGFAKKVPD-RTF-TLCGTPEYLAPEVI 187
Query: 199 RRR-YGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAK 257
+ + +GK +D W+ GV+LY ++G PPF+ +T Y+ IL G + F W A+
Sbjct: 188 QSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFRIYEKILAGRLKFPN--W--FDGRAR 243
Query: 258 DLVRRMLTKDPKRRITA-----AQVLEHPWLRE 285
DLV+ +L D +R+ A V HP+
Sbjct: 244 DLVKGLLQTDHTKRLGTLKGGVADVKNHPYFHG 276
|
Length = 329 |
| >gnl|CDD|173665 cd05574, STKc_phototropin_like, Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 132 bits (335), Expect = 5e-35
Identities = 80/296 (27%), Positives = 137/296 (46%), Gaps = 49/296 (16%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRR---EIQIRLYLSGQPN 85
++LG+G G +L T + +A K + KK + + + ++R E +I L P
Sbjct: 7 KLLGKGDVGRVFLVRLKGTGKLFALKVLDKK---EMIKRNKVKRVLTEQEI-LATLDHPF 62
Query: 86 VVEFKSTYEDETAVHVVMELCEGGDLFD--RIIAKGYNSERDAATVLRAIVNAVNVCHSM 143
+ ++++ ET + +VM+ C GG+LF + SE A ++ A+ H +
Sbjct: 63 LPTLYASFQTETYLCLVMDYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLL 122
Query: 144 GVMHRDLKPENF------------------------------SFISRDDNALLKVTDFGS 173
G+++RDLKPEN SR + ++
Sbjct: 123 GIVYRDLKPENILLHESGHIMLSDFDLSKQSDVEPPPVSKALRKGSRRSSVNSIPSET-- 180
Query: 174 ALLFEEGQVYRDIVGSGFYIAPEVLRRR-YGKEIDIWSAGVILYILLSGVPPFWAETKKG 232
E VG+ YIAPEV+ +G +D W+ G++LY +L G PF +
Sbjct: 181 -FSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSNRDE 239
Query: 233 TYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRI----TAAQVLEHPWLR 284
T+ IL+ E+ F P +SS+A+DL+R++L KDP +R+ AA++ +HP+ R
Sbjct: 240 TFSNILKKEVTFPGS--PPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQHPFFR 293
|
Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-terminal photosensory domain and a C-terminal catalytic domain. The N-terminal domain contains two LOV (Light, Oxygen or Voltage) domains that binds FMN. Photoexcitation of the LOV domains results in autophosphorylation at multiple sites and activation of the catalytic domain. Neurospora crassa nrc-2 plays a role in growth and development by controlling entry into the conidiation program. Length = 316 |
| >gnl|CDD|143346 cd07841, STKc_CDK7, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7 | Back alignment and domain information |
|---|
Score = 131 bits (333), Expect = 5e-35
Identities = 86/306 (28%), Positives = 132/306 (43%), Gaps = 65/306 (21%)
Query: 25 YFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIR---REIQIRLYLS 81
Y G+ LG G + V Y + T R A K I K + + A++ + REI++ L
Sbjct: 2 YEKGKKLGEGTYAVVYKARDKETGRIVAIKKI-KLGERKEAKDGINFTALREIKLLQELK 60
Query: 82 GQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRA--------- 132
PN++ + ++ +++V E E DL +++I +D + VL
Sbjct: 61 -HPNIIGLLDVFGHKSNINLVFEFMET-DL-EKVI-------KDKSIVLTPADIKSYMLM 110
Query: 133 IVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLF-EEGQVYRDIVGSGF 191
+ + HS ++HRDLKP N I + +LK+ DFG A F + V + +
Sbjct: 111 TLRGLEYLHSNWILHRDLKPNNL-LI--ASDGVLKLADFGLARSFGSPNRKMTHQVVTRW 167
Query: 192 YIAPEVL--RRRYGKEIDIWSAGVILYILLSGVPPF-----------------------W 226
Y APE+L R YG +D+WS G I LL VP W
Sbjct: 168 YRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKIFEALGTPTEENW 227
Query: 227 AETKKGTYDAILQGEIDFDTDP-------WPSISSTAKDLVRRMLTKDPKRRITAAQVLE 279
L ++F P +P+ S A DL++R+LT +P +RITA Q LE
Sbjct: 228 PGVTS------LPDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALE 281
Query: 280 HPWLRE 285
HP+
Sbjct: 282 HPYFSN 287
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is also a component of the general transcription factor TFIIH, which phosphorylates the C-terminal domain (CTD) of RNA polymerase II when it is bound with unphosphorylated DNA, as present in the pre-initiation complex. Following phosphorylation, the CTD dissociates from the DNA which allows transcription initiation. Length = 298 |
| >gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4 | Back alignment and domain information |
|---|
Score = 130 bits (330), Expect = 7e-35
Identities = 81/278 (29%), Positives = 124/278 (44%), Gaps = 40/278 (14%)
Query: 28 GRMLGRGQFGVSYLCTENSTNRPYACKSIA-KKPKMRLAENDMIRREIQIRLYLSGQPNV 86
G +G G FG Y T A K I + + + I E+++ L L PN+
Sbjct: 5 GNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKE--IADEMKV-LELLKHPNL 61
Query: 87 VEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVN----AVNVCHS 142
V++ V++ ME C GG L + + E V+R + HS
Sbjct: 62 VKYYGVEVHREKVYIFMEYCSGGTLEELLEHGRILDEH----VIRVYTLQLLEGLAYLHS 117
Query: 143 MGVMHRDLKPENFSFISRDDNALLKVTDFGSAL-LFEEGQVYR----DIVGSGFYIAPEV 197
G++HRD+KP N I D N ++K+ DFG A+ L + G+ Y+APEV
Sbjct: 118 HGIVHRDIKPAN---IFLDHNGVIKLGDFGCAVKLKNNTTTMGEEVQSLAGTPAYMAPEV 174
Query: 198 LRRR----YGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDF-----DTDP 248
+ +G+ DIWS G ++ + +G P W+E D Q I F P
Sbjct: 175 ITGGKGKGHGRAADIWSLGCVVLEMATGKRP-WSE-----LDNEFQ--IMFHVGAGHKPP 226
Query: 249 WP---SISSTAKDLVRRMLTKDPKRRITAAQVLEHPWL 283
P +S KD + R L DPK+R TA+++L+HP++
Sbjct: 227 IPDSLQLSPEGKDFLDRCLESDPKKRPTASELLQHPFV 264
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264 |
| >gnl|CDD|173757 cd08217, STKc_Nek2, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2 | Back alignment and domain information |
|---|
Score = 130 bits (329), Expect = 8e-35
Identities = 78/266 (29%), Positives = 124/266 (46%), Gaps = 25/266 (9%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFK 90
+G+G FG S + K I M E + E+ I L PN+V +
Sbjct: 8 IGKGSFGTVRKVRRKSDGKILVWKEI-DYGNMTEKEKQQLVSEVNILRELK-HPNIVRYY 65
Query: 91 STYEDETA--VHVVMELCEGGDLFDRIIAK-----GYNSERDAATVLRAIVNAVNVCH-- 141
D + +++VME CEGGDL ++I K Y E +L ++ A+ CH
Sbjct: 66 DRIIDRSNQTLYIVMEYCEGGDL-AQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNR 124
Query: 142 ---SMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVY-RDIVGSGFYIAPEV 197
V+HRDLKP N F+ ++N K+ DFG A + + + VG+ +Y++PE
Sbjct: 125 SDPGNTVLHRDLKPANI-FLDANNNV--KLGDFGLAKILGHDSSFAKTYVGTPYYMSPEQ 181
Query: 198 LRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSI-SST 255
L Y ++ DIWS G ++Y L + PPF A + I +G+ P SS
Sbjct: 182 LNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQLQLASKIKEGKF----RRIPYRYSSE 237
Query: 256 AKDLVRRMLTKDPKRRITAAQVLEHP 281
++++ ML DP +R + ++L+ P
Sbjct: 238 LNEVIKSMLNVDPDKRPSTEELLQLP 263
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exit. NIMA is involved in nuclear membrane fission. Vertebrate Nek2 is a cell cycle-regulated STK, localized in centrosomes and kinetochores, that regulates centrosome splitting at the G2/M phase. It also interacts with other mitotic kinases such as Polo-like kinase 1 and may play a role in spindle checkpoint. An increase in the expression of the human NEK2 gene is strongly associated with the progression of non-Hodgkin lymphoma. Length = 265 |
| >gnl|CDD|173674 cd05583, STKc_MSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase | Back alignment and domain information |
|---|
Score = 129 bits (326), Expect = 3e-34
Identities = 76/271 (28%), Positives = 141/271 (52%), Gaps = 21/271 (7%)
Query: 29 RMLGRGQFGVSYLC---TENSTNRPYACKSIAKKP---KMRLAENDMIRREIQIRLYLSG 82
R+LG G +G +L + + YA K + K K + AE+ R Q+ +
Sbjct: 6 RVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTER--QVLEAVRR 63
Query: 83 QPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHS 142
P +V ++ +T +H++++ GG+LF + + + +E + + IV A++ H
Sbjct: 64 CPFLVTLHYAFQTDTKLHLILDYVNGGELFTHLYQREHFTESEVRVYIAEIVLALDHLHQ 123
Query: 143 MGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYR--DIVGSGFYIAPEVLRR 200
+G+++RD+K EN I D + +TDFG + F + R G+ Y+APEV+R
Sbjct: 124 LGIIYRDIKLEN---ILLDSEGHVVLTDFGLSKEFLAEEEERAYSFCGTIEYMAPEVIRG 180
Query: 201 R---YGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWP-SISSTA 256
+ K +D WS GV+ + LL+G PF + ++ + I + I P+P ++S+ A
Sbjct: 181 GSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNSQSEISR-RILKSKPPFPKTMSAEA 239
Query: 257 KDLVRRMLTKDPKRRI---TAAQVLEHPWLR 284
+D ++++L KDPK+R+ A ++ HP+ +
Sbjct: 240 RDFIQKLLEKDPKKRLGANGADEIKNHPFFQ 270
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines. This triggers phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) in the C-terminal extension of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSKs are predominantly nuclear proteins. They are widely expressed in many tissues including heart, brain, lung, liver, kidney, and pancreas. There are two isoforms of MSK, called MSK1 and MSK2. Length = 288 |
| >gnl|CDD|173691 cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 130 bits (329), Expect = 3e-34
Identities = 82/262 (31%), Positives = 128/262 (48%), Gaps = 15/262 (5%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFK 90
+G+G +G +L + T A K + K +L E + E I L + +V+
Sbjct: 9 VGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDI-LTTTKSEWLVKLL 67
Query: 91 STYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDL 150
++D+ +++ ME GGD + G SE A + + AV+ H +G +HRDL
Sbjct: 68 YAFQDDEYLYLAMEYVPGGDFRTLLNNLGVLSEDHARFYMAEMFEAVDALHELGYIHRDL 127
Query: 151 KPENFSFISRDDNALLKVTDFGSALLFEEGQVY-RDIVGSGFYIAPEVLR-RRYGKEIDI 208
KPENF I + +K+TDFG L + Y +VGS Y+APEVLR + Y +D
Sbjct: 128 KPENF-LIDASGH--IKLTDFG---LSKGIVTYANSVVGSPDYMAPEVLRGKGYDFTVDY 181
Query: 209 WSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFD----TDPWPSISSTAKDLVRRML 264
WS G +LY L G PPF T T++ + + DP ++S A DL+ +++
Sbjct: 182 WSLGCMLYEFLCGFPPFSGSTPNETWENLKYWKETLQRPVYDDPRFNLSDEAWDLITKLI 241
Query: 265 TKDPKRRITA-AQVLEHPWLRE 285
DP RR + + HP+ +E
Sbjct: 242 N-DPSRRFGSLEDIKNHPFFKE 262
|
Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. Dbf2p is important in regulating the mitotic exit network (MEN) and in cytokinesis. Length = 333 |
| >gnl|CDD|173675 cd05584, STKc_p70S6K, Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Score = 127 bits (322), Expect = 3e-33
Identities = 83/266 (31%), Positives = 140/266 (52%), Gaps = 17/266 (6%)
Query: 29 RMLGRGQFGVSYLC---TENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPN 85
++LG+G +G + T T + +A K + K +R ++ + + L P
Sbjct: 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPF 61
Query: 86 VVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGV 145
+V+ ++ +++++E GG+LF + +G E A L I A+ H G+
Sbjct: 62 IVDLIYAFQTGGKLYLILEYLSGGELFMHLEREGIFMEDTACFYLSEISLALEHLHQQGI 121
Query: 146 MHRDLKPENFSFISRDDNALLKVTDFG-SALLFEEGQVYRDIVGSGFYIAPEVLRRR-YG 203
++RDLKPEN I D +K+TDFG EG V G+ Y+APE+L R +G
Sbjct: 122 IYRDLKPEN---ILLDAQGHVKLTDFGLCKESIHEGTVTHTFCGTIEYMAPEILMRSGHG 178
Query: 204 KEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRM 263
K +D WS G ++Y +L+G PPF AE +K T D IL+G+++ P ++ A+DL++++
Sbjct: 179 KAVDWWSLGALMYDMLTGAPPFTAENRKKTIDKILKGKLNLP----PYLTPEARDLLKKL 234
Query: 264 LTKDPKRRI-----TAAQVLEHPWLR 284
L ++P R+ AA+V HP+ R
Sbjct: 235 LKRNPSSRLGAGPGDAAEVQSHPFFR 260
|
Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the insulin receptor substrate IRS-1, among others. Mammals contain two isoforms of p70S6K, named S6K1 and S6K2 (or S6K-beta). Length = 323 |
| >gnl|CDD|173700 cd05609, STKc_MAST, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase | Back alignment and domain information |
|---|
Score = 126 bits (318), Expect = 7e-33
Identities = 95/320 (29%), Positives = 151/320 (47%), Gaps = 78/320 (24%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIR------LYLSG 82
+++ G +G YL T + +A K I K +N ++R +IQ L +
Sbjct: 7 KLISNGAYGAVYLVRHKETRQRFAMKKINK-------QNLILRNQIQQVFVERDILTFAE 59
Query: 83 QPNVVEFKSTYEDETAVHVVMELCEGGD---LFDRI------IAKGYNSERDAATVLRAI 133
P VV ++E + + +VME EGGD L I +A+ Y +E TVL
Sbjct: 60 NPFVVSMFCSFETKRHLCMVMEYVEGGDCATLLKNIGALPVDMARMYFAE----TVL--- 112
Query: 134 VNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFG--------SALLFEEGQVYRD 185
A+ H+ G++HRDLKP+N S +K+TDFG EG + +D
Sbjct: 113 --ALEYLHNYGIVHRDLKPDNLLITSMGH---IKLTDFGLSKIGLMSLTTNLYEGHIEKD 167
Query: 186 --------IVGSGFYIAPEV-LRRRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDA 236
+ G+ YIAPEV LR+ YGK +D W+ G+ILY L G PF+ +T + +
Sbjct: 168 TREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQ 227
Query: 237 ILQGEIDFDTDPWP----SISSTAKDLVRRMLTKDPKRRI---TAAQVLEHPW------- 282
++ +I+ WP ++ + A+DL+ R+L ++P R+ A +V +H +
Sbjct: 228 VISDDIE-----WPEGDEALPADAQDLISRLLRQNPLERLGTGGAFEVKQHRFFLGLDWN 282
Query: 283 --LRESGE------ASDDTS 294
LR+ E + DDTS
Sbjct: 283 GLLRQKAEFIPQLESEDDTS 302
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. MAST1, MAST2, and MAST3 bind and phosphorylate the tumor suppressor PTEN, and may contribute to the regulation and stabilization of PTEN. MAST2 is involved in the regulation of the Fc-gamma receptor of the innate immune response in macrophages, and may also be involved in the regulation of the Na+/H+ exchanger NHE3. Length = 305 |
| >gnl|CDD|173677 cd05586, STKc_Sck1_like, Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 126 bits (317), Expect = 2e-32
Identities = 78/264 (29%), Positives = 134/264 (50%), Gaps = 15/264 (5%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAE--NDMIRREIQIRLYLSGQPNVVE 88
+G+G FG Y + T R YA K ++KK + E + + R I +R L P +V
Sbjct: 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVG 60
Query: 89 FKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHR 148
K +++ ++ +++V + GG+LF + +G SE A + +V A+ H +++R
Sbjct: 61 LKFSFQTDSDLYLVTDYMSGGELFWHLQKEGRFSEDRAKFYIAELVLALEHLHKYDIVYR 120
Query: 149 DLKPENFSFISRDDNALLKVTDFG-SALLFEEGQVYRDIVGSGFYIAPEVL--RRRYGKE 205
DLKPEN I D + + DFG S + + G+ Y+APEVL + Y K
Sbjct: 121 DLKPEN---ILLDATGHIALCDFGLSKANLTDNKTTNTFCGTTEYLAPEVLLDEKGYTKH 177
Query: 206 IDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLT 265
+D WS GV+++ + G PF+AE + Y I G++ F P +S + V+ +L
Sbjct: 178 VDFWSLGVLVFEMCCGWSPFYAEDTQQMYRNIAFGKVRF---PKNVLSDEGRQFVKGLLN 234
Query: 266 KDPKRRI----TAAQVLEHPWLRE 285
++P+ R+ A ++ EHP+ +
Sbjct: 235 RNPQHRLGAHRDAVELKEHPFFAD 258
|
Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of yeast to environmental changes. Length = 330 |
| >gnl|CDD|132940 cd06609, STKc_MST3_like, Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 123 bits (312), Expect = 3e-32
Identities = 78/287 (27%), Positives = 135/287 (47%), Gaps = 31/287 (10%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDM--IRREIQIRLYLSG--QP 84
+G+G FG Y + TN+ A K I + AE+++ I++EIQ LS P
Sbjct: 7 ECIGKGSFGEVYKAIDKRTNQVVAIKVI----DLEEAEDEIEDIQQEIQF---LSQCRSP 59
Query: 85 NVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMG 144
+ ++ ++ + + ++ME C GG D + + E A +LR ++ + H G
Sbjct: 60 YITKYYGSFLKGSKLWIIMEYCGGGSCLDLLKPGKLD-ETYIAFILREVLLGLEYLHEEG 118
Query: 145 VMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRD-IVGSGFYIAPEVLRR-RY 202
+HRD+K N I + +K+ DFG + R+ VG+ F++APEV+++ Y
Sbjct: 119 KIHRDIKAAN---ILLSEEGDVKLADFGVSGQLTSTMSKRNTFVGTPFWMAPEVIKQSGY 175
Query: 203 GKEIDIWSAGVILYILLSGVPPFWAETKKGTYDA------ILQGEIDFDTDPWPSISSTA 256
++ DIWS G+ L G PP I + S
Sbjct: 176 DEKADIWSLGITAIELAKGEPPL------SDLHPMRVLFLIPKNNPPSLEG--NKFSKPF 227
Query: 257 KDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASDDTSVILRMKQFR 303
KD V L KDPK R +A ++L+H +++++ + S T +I R+K+++
Sbjct: 228 KDFVSLCLNKDPKERPSAKELLKHKFIKKAKKTSYLTLLIERIKKWK 274
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) signaling pathway, and plays a role in cytokinesis. SPS1 plays a role in regulating proteins required for spore wall formation. MST4 plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. STK25 may play a role in the regulation of cell migration and polarization. Length = 274 |
| >gnl|CDD|173734 cd07830, STKc_MAK_like, Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 123 bits (312), Expect = 3e-32
Identities = 86/305 (28%), Positives = 126/305 (41%), Gaps = 68/305 (22%)
Query: 25 YFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPK-----MRLAENDMIRREIQIRLY 79
Y + LG G FG YL T A K + KK M L RE++
Sbjct: 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNL-------REVKSLRK 53
Query: 80 LSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYN--SERDAATVLRAIVNAV 137
L+ PN+V+ K + + ++ V E EG +L+ + + SE +++ I+ +
Sbjct: 54 LNEHPNIVKLKEVFRENDELYFVFEYMEG-NLYQLMKDRKGKPFSESVIRSIIYQILQGL 112
Query: 138 NVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEV 197
H G HRDLKPEN +S + ++K+ DFG A Y D V + +Y APE+
Sbjct: 113 AHIHKHGFFHRDLKPENL-LVSGPE--VVKIADFGLAREIRSRPPYTDYVSTRWYRAPEI 169
Query: 198 LRRR--YGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEID-----------F 244
L R Y +DIW+ G I+ L + P F G+ EID
Sbjct: 170 LLRSTSYSSPVDIWALGCIMAELYTLRPLF-----PGS------SEIDQLYKICSVLGTP 218
Query: 245 DTDPW--------------------------PSISSTAKDLVRRMLTKDPKRRITAAQVL 278
W P+ S A DL++ ML DPK+R TA+Q L
Sbjct: 219 TKQDWPEGYKLASKLGFRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQAL 278
Query: 279 EHPWL 283
+HP+
Sbjct: 279 QHPYF 283
|
Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertility. It functions as a coactivator of the androgen receptor in prostate cells. MRK, also called Intestinal Cell Kinase (ICK), is expressed ubiquitously, with highest expression in the ovary and uterus. A missense mutation in MRK causes endocrine-cerebro-osteodysplasia (ECO), suggesting that this protein plays an important role in the development of many organs. MAK and MRK may be involved in regulating cell cycle and cell fate. Ime2p is a meiosis-specific kinase that is important during meiotic initiation and during the later stages of meiosis. Mde3 functions downstream of the transcription factor Mei-4 which is essential for meiotic prophase I. Length = 283 |
| >gnl|CDD|173711 cd05621, STKc_ROCK2, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2 | Back alignment and domain information |
|---|
Score = 125 bits (316), Expect = 4e-32
Identities = 88/268 (32%), Positives = 146/268 (54%), Gaps = 20/268 (7%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVE 88
+++GRG FG L S+ + YA K ++K ++ +++ E I + + P VV+
Sbjct: 49 KVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDI-MAFANSPWVVQ 107
Query: 89 FKSTYEDETAVHVVMELCEGGDLFDRIIAKGYN-SERDAATVLRAIVNAVNVCHSMGVMH 147
++D+ +++VME GGDL + + Y+ E+ A +V A++ HSMG++H
Sbjct: 108 LFCAFQDDKYLYMVMEYMPGGDLVN--LMSNYDVPEKWAKFYTAEVVLALDAIHSMGLIH 165
Query: 148 RDLKPENFSFISRDDNALLKVTDFGSALLFEE-GQVYRDI-VGSGFYIAPEVLRRR---- 201
RD+KP+N D + LK+ DFG+ + +E G V D VG+ YI+PEVL+ +
Sbjct: 166 RDVKPDNMLL---DKHGHLKLADFGTCMKMDETGMVRCDTAVGTPDYISPEVLKSQGGDG 222
Query: 202 -YGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAIL--QGEIDFDTDPWPSISSTAKD 258
YG+E D WS GV L+ +L G PF+A++ GTY I+ + ++F D IS AK+
Sbjct: 223 YYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHKNSLNFPED--VEISKHAKN 280
Query: 259 LVRRMLTKDPKR--RITAAQVLEHPWLR 284
L+ LT R R ++ +HP+ +
Sbjct: 281 LICAFLTDREVRLGRNGVEEIKQHPFFK 308
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found to play a role in stress fiber and focal adhesion formation. It is prominently expressed in the brain, heart, and skeletal muscles. It is implicated in vascular and neurological disorders, such as hypertension and vasospasm of the coronary and cerebral arteries. ROCK2 is also activated by caspase-2 cleavage, resulting in thrombin-induced microparticle generation in response to cell activation. Mice deficient in ROCK2 show intrauterine growth retardation and embryonic lethality because of placental dysfunction. Length = 370 |
| >gnl|CDD|173726 cd06610, STKc_OSR1_SPAK, Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase | Back alignment and domain information |
|---|
Score = 122 bits (308), Expect = 7e-32
Identities = 67/229 (29%), Positives = 107/229 (46%), Gaps = 22/229 (9%)
Query: 68 DMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFD---RIIAKGYNSER 124
D +R+E+Q + PNVV++ +++ + +VM GG L D +G E
Sbjct: 44 DELRKEVQA-MSQCNHPNVVKYYTSFVVGDELWLVMPYLSGGSLLDIMKSSYPRGGLDEA 102
Query: 125 DAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFG-SALLFEEGQVY 183
ATVL+ ++ + HS G +HRD+K N I ++ +K+ DFG SA L + G
Sbjct: 103 IIATVLKEVLKGLEYLHSNGQIHRDIKAGN---ILLGEDGSVKIADFGVSASLADGGDRT 159
Query: 184 R----DIVGSGFYIAPEVL--RRRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAI 237
R VG+ ++APEV+ Y + DIWS G+ L +G P+
Sbjct: 160 RKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMKVLMLT 219
Query: 238 LQG-----EIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHP 281
LQ E D + S + + ++ L KDP +R TA ++L+H
Sbjct: 220 LQNDPPSLETGADYKKY---SKSFRKMISLCLQKDPSKRPTAEELLKHK 265
|
Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 and SPAK contain a conserved C-terminal (CCT) domain, which recognizes a unique motif ([RK]FX[VI]) present in their activating kinases (WNK1/WNK4) and their substrates. Length = 267 |
| >gnl|CDD|173761 cd08221, STKc_Nek9, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9 | Back alignment and domain information |
|---|
Score = 122 bits (307), Expect = 7e-32
Identities = 83/268 (30%), Positives = 134/268 (50%), Gaps = 20/268 (7%)
Query: 24 HYFFGRMLGRGQFGVSYLCTENSTNRPYACKSI----AKKPKMRLAENDMIRREIQIRLY 79
HY R+LG+G FG + L + K + + + R A N EI I L
Sbjct: 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALN-----EIVI-LS 54
Query: 80 LSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYN--SERDAATVLRAIVNAV 137
L PN++ + + + D+ + + ME GG L+D+I+ + E L IV+AV
Sbjct: 55 LLQHPNIIAYYNHFMDDNTLLIEMEYANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAV 114
Query: 138 NVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFG-SALLFEEGQVYRDIVGSGFYIAPE 196
+ H G++HRD+K N F+++ L+K+ DFG S +L E + +VG+ +Y++PE
Sbjct: 115 SYIHKAGILHRDIKTLNI-FLTKAG--LIKLGDFGISKILGSEYSMAETVVGTPYYMSPE 171
Query: 197 VLR-RRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISST 255
+ + +Y + DIW+ G +LY LL+ F A I+QG + SS
Sbjct: 172 LCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNPLNLVVKIVQGNYTPVVSVY---SSE 228
Query: 256 AKDLVRRMLTKDPKRRITAAQVLEHPWL 283
LV +L +DP++R TA +VL+ P L
Sbjct: 229 LISLVHSLLQQDPEKRPTADEVLDQPLL 256
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associates with FACT (FAcilitates Chromatin Transcription) and modulates interphase progression. It also interacts with Nek6, and Nek7, during mitosis, resulting in their activation. Length = 256 |
| >gnl|CDD|173721 cd05632, STKc_GRK5, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5 | Back alignment and domain information |
|---|
Score = 122 bits (308), Expect = 9e-32
Identities = 85/268 (31%), Positives = 129/268 (48%), Gaps = 20/268 (7%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVE 88
R+LG+G FG C +T + YACK + KK + M E QI ++ Q VV
Sbjct: 6 RVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQ-FVVN 64
Query: 89 FKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVC------HS 142
YE + A+ +V+ + GGDL I YN RA+ A + H
Sbjct: 65 LAYAYETKDALCLVLTIMNGGDLKFHI----YNMGNPGFEEERALFYAAEILCGLEDLHR 120
Query: 143 MGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLR-RR 201
++RDLKPEN I DD ++++D G A+ EG+ R VG+ Y+APEVL +R
Sbjct: 121 ENTVYRDLKPEN---ILLDDYGHIRISDLGLAVKIPEGESIRGRVGTVGYMAPEVLNNQR 177
Query: 202 YGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVR 261
Y D W G ++Y ++ G PF +K + + + ++ + S AK + +
Sbjct: 178 YTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREEVDRRVLETEEVYSAKFSEEAKSICK 237
Query: 262 RMLTKDPKRRI-----TAAQVLEHPWLR 284
+LTKDPK+R+ A +V HP+ R
Sbjct: 238 MLLTKDPKQRLGCQEEGAGEVKRHPFFR 265
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with the membrane though an N-terminal PIP2 binding domain and also binds phospholipids via its C-terminus. GRK5 deficiency is associated with early Alzheimer's disease in humans and mouse models. GRK5 also plays a crucial role in the pathogenesis of sporadic Parkinson's disease. It participates in the regulation and desensitization of PDGFRbeta, a receptor tyrosine kinase involved in a variety of downstream cellular effects including cell growth, chemotaxis, apoptosis, and angiogenesis. GRK5 also regulates Toll-like receptor 4, which is involved in innate and adaptive immunity. Length = 285 |
| >gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2 | Back alignment and domain information |
|---|
Score = 120 bits (303), Expect = 3e-31
Identities = 76/268 (28%), Positives = 123/268 (45%), Gaps = 37/268 (13%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFK 90
LG G +G Y T + A K + + + I +EI I L P +V++
Sbjct: 11 LGEGSYGSVYKAIHKETGQVVAIKVVPVEE-----DLQEIIKEISI-LKQCDSPYIVKYY 64
Query: 91 STYEDETAVHVVMELCEGGDLFD--RIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHR 148
+Y T + +VME C G + D +I K E + A +L + + HS +HR
Sbjct: 65 GSYFKNTDLWIVMEYCGAGSVSDIMKITNKTLT-EEEIAAILYQTLKGLEYLHSNKKIHR 123
Query: 149 DLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRD-IVGSGFYIAPEVLRR-RYGKEI 206
D+K N I ++ K+ DFG + + R+ ++G+ F++APEV++ Y +
Sbjct: 124 DIKAGN---ILLNEEGQAKLADFGVSGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYNNKA 180
Query: 207 DIWSAGVILYILLSGVPPFWAETKKGTYD-----AILQGEIDFDTDPWPSISSTAK---- 257
DIWS G+ + G PP+ D AI I P P++S K
Sbjct: 181 DIWSLGITAIEMAEGKPPY--------SDIHPMRAIF--MI--PNKPPPTLSDPEKWSPE 228
Query: 258 --DLVRRMLTKDPKRRITAAQVLEHPWL 283
D V++ L KDP+ R +A Q+L+HP++
Sbjct: 229 FNDFVKKCLVKDPEERPSAIQLLQHPFI 256
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256 |
| >gnl|CDD|173704 cd05613, STKc_MSK1_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1 | Back alignment and domain information |
|---|
Score = 121 bits (304), Expect = 3e-31
Identities = 79/272 (29%), Positives = 149/272 (54%), Gaps = 19/272 (6%)
Query: 29 RMLGRGQFGVSYLCTENS---TNRPYACKSIAKKPKMRLAEN-DMIRREIQIRLYLSGQP 84
++LG G +G +L + S + + YA K + K ++ A+ + R E Q+ ++ P
Sbjct: 6 KVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSP 65
Query: 85 NVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMG 144
+V ++ +T +H++++ GG+LF + + E++ IV A+ H +G
Sbjct: 66 FLVTLHYAFQTDTKLHLILDYINGGELFTHLSQRERFKEQEVQIYSGEIVLALEHLHKLG 125
Query: 145 VMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYR--DIVGSGFYIAPEVLR--- 199
+++RD+K EN I D N + +TDFG + F E +V R G+ Y+AP+++R
Sbjct: 126 IIYRDIKLEN---ILLDSNGHVVLTDFGLSKEFHEDEVERAYSFCGTIEYMAPDIVRGGD 182
Query: 200 RRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPS-ISSTAKD 258
+ K +D WS GV++Y LL+G PF + +K + I + + + P+P +S+ AKD
Sbjct: 183 GGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEP-PYPQEMSALAKD 241
Query: 259 LVRRMLTKDPKRRI-----TAAQVLEHPWLRE 285
+++R+L KDPK+R+ A ++ +HP+ ++
Sbjct: 242 IIQRLLMKDPKKRLGCGPSDADEIKKHPFFQK 273
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK1 plays a role in the regulation of translational control and transcriptional activation. It phosphorylates the transcription factors, CREB and NFkappaB. It also phosphorylates the nucleosomal proteins H3 and HMG-14. Increased phosphorylation of MEK1 is associated with the development of cerebral ischemic/hypoxic preconditioning. Length = 290 |
| >gnl|CDD|173689 cd05598, STKc_LATS, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor | Back alignment and domain information |
|---|
Score = 123 bits (310), Expect = 3e-31
Identities = 88/319 (27%), Positives = 138/319 (43%), Gaps = 55/319 (17%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVE 88
+ +G G FG L + TN YA K++ K + + ++ E I L + VV+
Sbjct: 7 KTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDI-LAEADNEWVVK 65
Query: 89 FKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHR 148
+++D+ ++ VM+ GGD+ +I G E A + + A+ H MG +HR
Sbjct: 66 LYYSFQDKDNLYFVMDYIPGGDMMSLLIRLGIFEEDLARFYIAELTCAIESVHKMGFIHR 125
Query: 149 DLKPENFSFISRDDNALLKVTDFG---------SALLFEEGQVYR--------------- 184
D+KP+N I RD + +K+TDFG + +++G +R
Sbjct: 126 DIKPDNI-LIDRDGH--IKLTDFGLCTGFRWTHDSKYYQKGDHHRQDSMEPSEEWSEIDR 182
Query: 185 --------------------DIVGSGFYIAPEVLRRR-YGKEIDIWSAGVILYILLSGVP 223
+VG+ YIAPEVL R Y + D WS GVILY +L G P
Sbjct: 183 CRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGQP 242
Query: 224 PFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKDPKR--RITAAQVLEHP 281
PF A+T T ++ E +S A DL+ R+ R + A ++ HP
Sbjct: 243 PFLADTPAETQLKVINWETTLHIPSQAKLSREASDLILRLCCGAEDRLGKNGADEIKAHP 302
Query: 282 WLRESGEASDDTSVILRMK 300
+ + D S+I R K
Sbjct: 303 FFK----GIDFASLIRRQK 317
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Length = 376 |
| >gnl|CDD|173759 cd08219, STKc_Nek3, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3 | Back alignment and domain information |
|---|
Score = 120 bits (302), Expect = 4e-31
Identities = 86/261 (32%), Positives = 134/261 (51%), Gaps = 19/261 (7%)
Query: 25 YFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQP 84
Y R++G G FG + L ++++ YA K I + PK A D R+ + L P
Sbjct: 2 YNVLRVVGEGSFGRALLVQHVNSDQKYAMKEI-RLPKSSSAVED--SRKEAVLLAKMKHP 58
Query: 85 NVVEFKSTYEDETAVHVVMELCEGGDLFDRI-IAKGYNSERDAATVLRAIVN---AVNVC 140
N+V FK ++E + +++VME C+GGDL +I + +G D T+L+ V V
Sbjct: 59 NIVAFKESFEADGHLYIVMEYCDGGDLMQKIKLQRGKLFPED--TILQWFVQMCLGVQHI 116
Query: 141 HSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYR-DIVGSGFYIAPEVLR 199
H V+HRD+K +N F+++ N +K+ DFGSA L Y VG+ +Y+ PE+
Sbjct: 117 HEKRVLHRDIKSKNI-FLTQ--NGKVKLGDFGSARLLTSPGAYACTYVGTPYYVPPEIWE 173
Query: 200 RR-YGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPS-ISSTAK 257
Y + DIWS G ILY L + PF A + K + QG P PS S +
Sbjct: 174 NMPYNNKSDIWSLGCILYELCTLKHPFQANSWKNLILKVCQGSY----KPLPSHYSYELR 229
Query: 258 DLVRRMLTKDPKRRITAAQVL 278
L+++M ++P+ R +A +L
Sbjct: 230 SLIKQMFKRNPRSRPSATTIL 250
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activation of Vav2 and contributes to prolactin-mediated motility of breast cancer cells. Length = 255 |
| >gnl|CDD|173661 cd05570, STKc_PKC, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C | Back alignment and domain information |
|---|
Score = 121 bits (306), Expect = 4e-31
Identities = 80/272 (29%), Positives = 134/272 (49%), Gaps = 30/272 (11%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAEND----MIRREIQIRLYLSGQ- 83
++LG+G FG L T+ YA K + K + L ++D M + + L L+G+
Sbjct: 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKD--VILQDDDVECTMTEKRV---LALAGKH 55
Query: 84 PNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSM 143
P + + S ++ + + VME GGDL I G E A IV + H
Sbjct: 56 PFLTQLHSCFQTKDRLFFVMEYVNGGDLMFHIQRSGRFDEPRARFYAAEIVLGLQFLHER 115
Query: 144 GVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRD----IVGSGFYIAPEVLR 199
G+++RDLK +N + D +K+ DFG + +EG + G+ YIAPE+L
Sbjct: 116 GIIYRDLKLDN---VLLDSEGHIKIADFG---MCKEGILGGVTTSTFCGTPDYIAPEILS 169
Query: 200 -RRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKD 258
+ YG +D W+ GV+LY +L+G PF + + + +IL+ E+ + +S AK
Sbjct: 170 YQPYGPAVDWWALGVLLYEMLAGQSPFEGDDEDELFQSILEDEVRYPR----WLSKEAKS 225
Query: 259 LVRRMLTKDPKRRITA-----AQVLEHPWLRE 285
+++ LTK+P++R+ + HP+ RE
Sbjct: 226 ILKSFLTKNPEKRLGCLPTGEQDIKGHPFFRE 257
|
Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only require PS. PKCs phosphorylate and modify the activities of a wide variety of cellular proteins including receptors, enzymes, cytoskeletal proteins, transcription factors, and other kinases. They play a central role in signal transduction pathways that regulate cell migration and polarity, proliferation, differentiation, and apoptosis. Also included in this subfamily are the PKC-like proteins, called PKNs. Length = 318 |
| >gnl|CDD|132988 cd06657, STKc_PAK4, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4 | Back alignment and domain information |
|---|
Score = 120 bits (303), Expect = 5e-31
Identities = 85/278 (30%), Positives = 149/278 (53%), Gaps = 20/278 (7%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMR---LAENDMIRREIQIRLYLSGQPNVV 87
+G G G+ + T S+ + A K + + + R L +I R+ Q NVV
Sbjct: 28 IGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQ-------HENVV 80
Query: 88 EFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMH 147
E ++Y + VVME EGG L D I+ +E A V A++ A++V H+ GV+H
Sbjct: 81 EMYNSYLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLAVLKALSVLHAQGVIH 139
Query: 148 RDLKPENFSFISRDDNALLKVTDFG-SALLFEEGQVYRDIVGSGFYIAPEVLRR-RYGKE 205
RD+K ++ ++ D +K++DFG A + +E + +VG+ +++APE++ R YG E
Sbjct: 140 RDIKSDSI-LLTHDGR--VKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPELISRLPYGPE 196
Query: 206 IDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLT 265
+DIWS G+++ ++ G PP++ E I + + +S + K + R+L
Sbjct: 197 VDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMI-RDNLPPKLKNLHKVSPSLKGFLDRLLV 255
Query: 266 KDPKRRITAAQVLEHPWLRESGEASDDTSVILRMKQFR 303
+DP +R TAA++L+HP+L ++G S ++ M+Q R
Sbjct: 256 RDPAQRATAAELLKHPFLAKAGPPS---CIVPLMRQNR 290
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell morphology and cytoskeletal organization. It is essential for embryonic viability and proper neural development. Mice lacking PAK4 die due to defects in the fetal heart. In addition, their spinal cord motor neurons showed failure to differentiate and migrate. PAK4 also plays a role in cell survival and tumorigenesis. It is overexpressed in many primary tumors including colon, esophageal, and mammary tumors. PAK4 has also been implicated in viral and bacterial infection pathways. Length = 292 |
| >gnl|CDD|173739 cd07838, STKc_CDK4_6_like, Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 120 bits (303), Expect = 6e-31
Identities = 74/291 (25%), Positives = 122/291 (41%), Gaps = 48/291 (16%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDM---IRREIQI--RLYLSGQPN 85
+G G +G Y + +T R A K + ++ L+E + REI + +L PN
Sbjct: 7 IGEGAYGTVYKARDLNTGRFVALKKV----RVPLSEEGIPLSTLREIALLKQLESFEHPN 62
Query: 86 VVEF-----KSTYEDETAVHVVMELCEGGDL---FDRIIAKGYNSERDAATVLRAIVNAV 137
+V + E + +V E + DL + G E ++R ++ V
Sbjct: 63 IVRLLDVCHGPRTDRELKLTLVFEHVDQ-DLATYLSKCPKPGLPPET-IKDLMRQLLRGV 120
Query: 138 NVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEV 197
+ HS ++HRDLKP+N ++ D +K+ DFG A ++ +V + +Y APEV
Sbjct: 121 DFLHSHRIVHRDLKPQNI-LVTSDGQ--VKIADFGLARIYSFEMALTSVVVTLWYRAPEV 177
Query: 198 L-RRRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQ----------------- 239
L + Y +D+WS G I L P F ++ D I
Sbjct: 178 LLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEADQLDKIFDVIGLPSEEEWPRNVSLP 237
Query: 240 -------GEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWL 283
F P I DL+++MLT +P +RI+A + L+HP+
Sbjct: 238 RSSFPSYTPRSF-KSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQHPYF 287
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both expressed ubiquitously, associate with all three D cyclins (D1, D2 and D3), and phosphorylate the retinoblastoma (pRb) protein. They are also regulated by the INK4 family of inhibitors which associate with either the CDK alone or the CDK/cyclin complex. CDK4 and CDK6 show differences in subcellular localization, sensitivity to some inhibitors, timing in activation, tumor selectivity, and possibly substrate profiles. Although CDK4 and CDK6 seem to show some redundancy, they also have discrete, nonoverlapping functions. CDK6 plays an important role in cell differentiation. Length = 287 |
| >gnl|CDD|173705 cd05614, STKc_MSK2_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2 | Back alignment and domain information |
|---|
Score = 121 bits (304), Expect = 8e-31
Identities = 78/270 (28%), Positives = 143/270 (52%), Gaps = 18/270 (6%)
Query: 29 RMLGRGQFGVSYL---CTENSTNRPYACKSIAKKPKMRLAEN-DMIRREIQIRLYLSGQP 84
++LG G +G +L T + T + YA K + K ++ A+ + R E + ++ P
Sbjct: 6 KVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSP 65
Query: 85 NVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMG 144
+V ++ E +H++++ GG++F + + SE + I+ A+ H +G
Sbjct: 66 FLVTLHYAFQTEAKLHLILDYVSGGEMFTHLYQRDNFSEDEVRFYSGEIILALEHLHKLG 125
Query: 145 VMHRDLKPENFSFISRDDNALLKVTDFG--SALLFEEGQVYRDIVGSGFYIAPEVLRRR- 201
+++RD+K EN I D + +TDFG L EE + G+ Y+APE++R +
Sbjct: 126 IVYRDIKLEN---ILLDSEGHVVLTDFGLSKEFLSEEKERTYSFCGTIEYMAPEIIRGKG 182
Query: 202 -YGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPS-ISSTAKDL 259
+GK +D WS G++++ LL+G PF E ++ T + + + D P+PS I A+DL
Sbjct: 183 GHGKAVDWWSLGILIFELLTGASPFTLEGERNTQSEVSRRILKCDP-PFPSFIGPEAQDL 241
Query: 260 VRRMLTKDPKRRITAA-----QVLEHPWLR 284
+ ++L KDPK+R+ A ++ EHP+ +
Sbjct: 242 LHKLLRKDPKKRLGAGPQGASEIKEHPFFK 271
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK2 and MSK1 play nonredundant roles in activating histone H3 kinases, which play pivotal roles in compaction of the chromatin fiber. MSK2 is the required H3 kinase in response to stress stimuli and activation of the p38 MAPK pathway. MSK2 also plays a role in the pathogenesis of psoriasis. Length = 332 |
| >gnl|CDD|173696 cd05605, STKc_GRK4_like, Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 118 bits (297), Expect = 4e-30
Identities = 90/275 (32%), Positives = 132/275 (48%), Gaps = 27/275 (9%)
Query: 24 HYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKP-KMRLAENDMIRREIQIRLYLSG 82
HY R+LG+G FG C +T + YACK + KK K R E M E QI L
Sbjct: 4 HY---RVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEA-MALNEKQI-LEKVN 58
Query: 83 QPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVC-- 140
VV YE + A+ +V+ L GGDL I YN RA+ A +
Sbjct: 59 SRFVVSLAYAYETKDALCLVLTLMNGGDLKFHI----YNMGNPGFDEERAVFYAAEITCG 114
Query: 141 ----HSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPE 196
H +++RDLKPEN I DD ++++D G A+ EG+ R VG+ Y+APE
Sbjct: 115 LEDLHRERIVYRDLKPEN---ILLDDYGHIRISDLGLAVEIPEGETIRGRVGTVGYMAPE 171
Query: 197 VLR-RRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPS-ISS 254
V++ RY D W G ++Y ++ G PF +K + + + + D + + S
Sbjct: 172 VVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKREEVER-RVKEDQEEYSEKFSE 230
Query: 255 TAKDLVRRMLTKDPKRRI-----TAAQVLEHPWLR 284
A+ + R++LTKDP R+ A +V HP+ R
Sbjct: 231 AARSICRQLLTKDPGFRLGCRGEGAEEVKAHPFFR 265
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, GRK6, and similar GRKs. GRKs in this group contain an N-terminal RGS homology (RH) domain and a catalytic domain, but lack a G protein betagamma-subunit binding domain. They are localized to the plasma membrane through post-translational lipid modification or direct binding to PIP2. Length = 285 |
| >gnl|CDD|173690 cd05599, STKc_NDR_like, Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 119 bits (301), Expect = 5e-30
Identities = 84/309 (27%), Positives = 141/309 (45%), Gaps = 68/309 (22%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRRE--IQIR-----LYLS 81
+++GRG FG L + T YA K + K +M+ +E +R L +
Sbjct: 7 KVIGRGAFGEVRLVQKKDTGHIYAMKKLRKS--------EMLEKEQVAHVRAERDILAEA 58
Query: 82 GQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCH 141
P VV+ +++DE ++++ME GGD+ ++ K +E + + + A++ H
Sbjct: 59 DNPWVVKLYYSFQDENYLYLIMEYLPGGDMMTLLMKKDTFTEEETRFYIAETILAIDSIH 118
Query: 142 SMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQV---YRDI------------ 186
+G +HRD+KP+N D +K++DFG ++ YR +
Sbjct: 119 KLGYIHRDIKPDNLLL---DAKGHIKLSDFGLCTGLKKSHRTEFYRILSHALPSNFLDFI 175
Query: 187 ------------------------VGSGFYIAPEV-LRRRYGKEIDIWSAGVILYILLSG 221
VG+ YIAPEV L+ Y KE D WS GVI+Y +L G
Sbjct: 176 SKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLVG 235
Query: 222 VPPFWAETKKGTYDAILQGEIDFDTDPWPS---ISSTAKDLVRRMLTKDPKRRITAAQVL 278
PPF ++ + TY I+ + +T +P +S AKDL++R+ + +RR+ V
Sbjct: 236 YPPFCSDNPQETYRKIINWK---ETLQFPDEVPLSPEAKDLIKRLCC-EAERRLGNNGVN 291
Query: 279 E---HPWLR 284
E HP+ +
Sbjct: 292 EIKSHPFFK 300
|
Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplication. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. This subfamily also contains fungal NDR-like kinases. Length = 364 |
| >gnl|CDD|173712 cd05622, STKc_ROCK1, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1 | Back alignment and domain information |
|---|
Score = 119 bits (300), Expect = 6e-30
Identities = 89/268 (33%), Positives = 142/268 (52%), Gaps = 20/268 (7%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVE 88
+++GRG FG L ST + YA K ++K ++ +++ E I + + P VV+
Sbjct: 49 KVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDI-MAFANSPWVVQ 107
Query: 89 FKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRA-IVNAVNVCHSMGVMH 147
++D+ +++VME GGDL + + Y+ A A +V A++ HSMG +H
Sbjct: 108 LFYAFQDDRYLYMVMEYMPGGDLVN--LMSNYDVPEKWARFYTAEVVLALDAIHSMGFIH 165
Query: 148 RDLKPENFSFISRDDNALLKVTDFGSAL-LFEEGQVYRDI-VGSGFYIAPEVLRRR---- 201
RD+KP+N D + LK+ DFG+ + + +EG V D VG+ YI+PEVL+ +
Sbjct: 166 RDVKPDNMLL---DKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDG 222
Query: 202 -YGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAIL--QGEIDFDTDPWPSISSTAKD 258
YG+E D WS GV LY +L G PF+A++ GTY I+ + + F D IS AK+
Sbjct: 223 YYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDD--NDISKEAKN 280
Query: 259 LVRRMLTKDPKR--RITAAQVLEHPWLR 284
L+ LT R R ++ H + +
Sbjct: 281 LICAFLTDREVRLGRNGVEEIKRHLFFK 308
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, and kidney. It mediates signaling from Rho to the actin cytoskeleton. It is implicated in the development of cardiac fibrosis, cardiomyocyte apoptosis, and hyperglycemia. Mice deficient with ROCK1 display eyelids open at birth (EOB) and omphalocele phenotypes due to the disorganization of actin filaments in the eyelids and the umbilical ring. Length = 371 |
| >gnl|CDD|143338 cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 117 bits (296), Expect = 6e-30
Identities = 76/295 (25%), Positives = 124/295 (42%), Gaps = 55/295 (18%)
Query: 30 MLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIR----LYLSGQPN 85
++G G +GV C +T A K K + +E+D ++ +R L N
Sbjct: 8 VVGEGAYGVVLKCRNKATGEIVAIK------KFKESEDDEDVKKTALREVKVLRQLRHEN 61
Query: 86 VVEFKSTYEDETAVHVVMELCEGG--DLFDRIIAKGYNSERDAATVLRAI---VNAVNVC 140
+V K + + +++V E E +L + V I + A+ C
Sbjct: 62 IVNLKEAFRRKGRLYLVFEYVERTLLELLEA-----SPGGLPPDAVRSYIWQLLQAIAYC 116
Query: 141 HSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEG--QVYRDIVGSGFYIAPEVL 198
HS ++HRD+KPEN I ++ +LK+ DFG A D V + +Y APE+L
Sbjct: 117 HSHNIIHRDIKPEN---ILVSESGVLKLCDFGFARALRARPASPLTDYVATRWYRAPELL 173
Query: 199 --RRRYGKEIDIWSAGVILYILLSGVPPFWAET--------KKGTYDAILQGEIDFDTDP 248
YGK +D+W+ G I+ LL G P F ++ +K + F ++P
Sbjct: 174 VGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFSSNP 233
Query: 249 ------WPSI--------------SSTAKDLVRRMLTKDPKRRITAAQVLEHPWL 283
+P SS A D ++ L DPK R+T ++L+HP+
Sbjct: 234 RFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQHPYF 288
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning and memory. Length = 288 |
| >gnl|CDD|132990 cd06659, STKc_PAK6, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6 | Back alignment and domain information |
|---|
Score = 118 bits (296), Expect = 6e-30
Identities = 82/268 (30%), Positives = 146/268 (54%), Gaps = 29/268 (10%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACK--SIAKKPKMRLAENDM-IRREIQIRLYLSGQPNVV 87
+G G G+ + E + R A K + K+ + L N++ I R+ Q NVV
Sbjct: 29 IGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQ-------HQNVV 81
Query: 88 EFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMH 147
E +Y + V+ME +GG L D I+++ +E ATV +++ A+ HS GV+H
Sbjct: 82 EMYKSYLVGEELWVLMEFLQGGALTD-IVSQTRLNEEQIATVCESVLQALCYLHSQGVIH 140
Query: 148 RDLKPENFSFISRDDNALLKVTDFG-SALLFEEGQVYRDIVGSGFYIAPEVLRRR-YGKE 205
RD+K ++ ++ D +K++DFG A + ++ + +VG+ +++APEV+ R YG E
Sbjct: 141 RDIKSDSI-LLTLDGR--VKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRTPYGTE 197
Query: 206 IDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPS------ISSTAKDL 259
+DIWS G+++ ++ G PP+++++ +Q P P IS +D
Sbjct: 198 VDIWSLGIMVIEMVDGEPPYFSDSP-------VQAMKRLRDSPPPKLKNAHKISPVLRDF 250
Query: 260 VRRMLTKDPKRRITAAQVLEHPWLRESG 287
+ RMLT++P+ R TA ++L+HP+L ++G
Sbjct: 251 LERMLTREPQERATAQELLDHPFLLQTG 278
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role in stress responses through its activation by the mitogen-activated protein kinase (MAPK) p38 and MAPK kinase 6 (MKK6) pathway. PAK6 is highly expressed in the brain. It is not required for viability, but together with PAK5, it is required for normal levels of locomotion and activity, and for learning and memory. Increased expression of PAK6 is found in primary and metastatic prostate cancer. PAK6 may play a role in the regulation of motility. Length = 297 |
| >gnl|CDD|173668 cd05577, STKc_GRK, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase | Back alignment and domain information |
|---|
Score = 117 bits (294), Expect = 8e-30
Identities = 79/268 (29%), Positives = 128/268 (47%), Gaps = 24/268 (8%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKP-KMRLAEN-DMIRREIQIRLYLSGQPNVVE 88
LG+G FG C +T + YACK + KK K R E + ++I L +V
Sbjct: 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKI---LEKVSSRFIVS 57
Query: 89 FKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVC------HS 142
+E + + +VM L GGDL I YN RAI A + H
Sbjct: 58 LAYAFETKDDLCLVMTLMNGGDLKYHI----YNVGEPGFPEARAIFYAAQIICGLEHLHQ 113
Query: 143 MGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLR-RR 201
+++RDLKPEN + DD+ ++++D G A+ + G+ + G+ Y+APEVL+
Sbjct: 114 RRIVYRDLKPEN---VLLDDHGNVRISDLGLAVELKGGKKIKGRAGTPGYMAPEVLQGEV 170
Query: 202 YGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVR 261
Y +D ++ G LY +++G PF +K + + + ++ + S AKDL
Sbjct: 171 YDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEELKRRTLEMAVEYPDKFSPEAKDLCE 230
Query: 262 RMLTKDPKRRI-----TAAQVLEHPWLR 284
+L KDP++R+ +A +V EHP +
Sbjct: 231 ALLQKDPEKRLGCRGGSADEVREHPLFK 258
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of G protein signaling) homology (RH) domain and several motifs. The C-terminus diverges among different groups of GRKs. There are seven types of GRKs, named GRK1 to GRK7. They are subdivided into three main groups: visual (GRK1/7); beta-adrenergic receptor kinases (GRK2/3); and GRK4-like (GRK4/5/6). Expression of GRK2/3/5/6 is widespread while GRK1/4/7 show a limited tissue distribution. The substrate spectrum of the widely expressed GRKs partially overlaps. GRKs play important roles in the cardiovascular, immune, respiratory, skeletal, and nervous systems. Length = 277 |
| >gnl|CDD|173692 cd05601, STKc_CRIK, Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase | Back alignment and domain information |
|---|
Score = 117 bits (296), Expect = 1e-29
Identities = 89/277 (32%), Positives = 132/277 (47%), Gaps = 37/277 (13%)
Query: 30 MLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEF 89
++GRG FG + E +T YA K + K + E I L +S P + +
Sbjct: 8 LVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDI-LSISNSPWIPQL 66
Query: 90 KSTYEDETAVHVVMELCEGGDL----------FDRIIAKGYNSERDAATVLRAIVNAVNV 139
+ ++D+ +++VME GGDL FD +A+ Y +E +V A++
Sbjct: 67 QYAFQDKDNLYLVMEYQPGGDLLSLLNRYEDQFDEDMAQFYLAE---------LVLAIHS 117
Query: 140 CHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSAL-LFEEGQVYRDI-VGSGFYIAPEV 197
H MG +HRD+KPEN + D +K+ DFGSA L V + VG+ YIAPEV
Sbjct: 118 VHQMGYVHRDIKPEN---VLIDRTGHIKLADFGSAARLTANKMVNSKLPVGTPDYIAPEV 174
Query: 198 L-------RRRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAIL--QGEIDFDTDP 248
L + YG E D WS GVI Y ++ G PF T TY+ I+ Q + F D
Sbjct: 175 LTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAKTYNNIMNFQRFLKFPED- 233
Query: 249 WPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRE 285
P +SS DL++ +L K R+ + HP+ +
Sbjct: 234 -PKVSSDFLDLIQSLLC-GQKERLGYEGLCCHPFFSK 268
|
Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnormal cytokinesis and massive apoptosis in neuronal precursors. A Down syndrome critical region protein TTC3 interacts with CRIK and inhibits CRIK-dependent neuronal differentiation and neurite extension. Length = 330 |
| >gnl|CDD|173719 cd05630, STKc_GRK6, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6 | Back alignment and domain information |
|---|
Score = 117 bits (293), Expect = 1e-29
Identities = 86/269 (31%), Positives = 130/269 (48%), Gaps = 20/269 (7%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVE 88
R+LG+G FG C +T + YACK + KK + M E QI L VV
Sbjct: 6 RVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQI-LEKVNSRFVVS 64
Query: 89 FKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVC------HS 142
YE + A+ +V+ L GGDL I G + RA+ A +C H
Sbjct: 65 LAYAYETKDALCLVLTLMNGGDLKFHIYHMGEAGFEEG----RAVFYAAEICCGLEDLHQ 120
Query: 143 MGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLR-RR 201
+++RDLKPEN I DD+ ++++D G A+ EGQ + VG+ Y+APEV++ R
Sbjct: 121 ERIVYRDLKPEN---ILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNER 177
Query: 202 YGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVR 261
Y D W+ G +LY +++G PF KK + + + + + S A+ L +
Sbjct: 178 YTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVQEEYSEKFSPDARSLCK 237
Query: 262 RMLTKDPKRRI-----TAAQVLEHPWLRE 285
+L KDPK R+ A +V EHP ++
Sbjct: 238 MLLCKDPKERLGCQGGGAREVKEHPLFKQ 266
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK6 plays important roles in the regulation of dopamine, M3 muscarinic, opioid, and chemokine receptor signaling. It also plays maladaptive roles in addiction and Parkinson's disease. GRK6-deficient mice exhibit altered dopamine receptor regulation, decreased lymphocyte chemotaxis, and increased acute inflammation and neutrophil chemotaxis. Length = 285 |
| >gnl|CDD|173688 cd05597, STKc_DMPK_like, Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 117 bits (295), Expect = 2e-29
Identities = 86/275 (31%), Positives = 139/275 (50%), Gaps = 34/275 (12%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVE 88
+++GRG FG + +T + YA K + K ++ AE R E + + + +
Sbjct: 7 KVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRW-ITN 65
Query: 89 FKSTYEDETAVHVVMELCEGGDLF-------DRI---IAKGYNSERDAATVLRAIVNAVN 138
++DE +++VM+ GGDL DR+ +A+ Y +E +V A++
Sbjct: 66 LHYAFQDENNLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAE---------MVLAID 116
Query: 139 VCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSAL-LFEEGQVYRDI-VGSGFYIAPE 196
H +G +HRD+KP+N + D N +++ DFGS L L +G V ++ VG+ YI+PE
Sbjct: 117 SVHQLGYVHRDIKPDN---VLLDKNGHIRLADFGSCLRLLADGTVQSNVAVGTPDYISPE 173
Query: 197 VLRR------RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPW- 249
+L+ RYG E D WS GV +Y +L G PF+AE+ TY I+ + F P
Sbjct: 174 ILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKEHFQFPPDV 233
Query: 250 PSISSTAKDLVRRMLTKDPKR--RITAAQVLEHPW 282
+S AKDL+RR++ R R +HP+
Sbjct: 234 TDVSEEAKDLIRRLICSPETRLGRNGLQDFKDHPF 268
|
Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy, and cardiac conduction defects. The genetic basis for DM1 is the mutational expansion of a CTG repeat in the 3'-UTR of DMPK. DMPK is expressed in skeletal and cardiac muscles, and in central nervous tissues. The functional role of DMPK is not fully understood. It may play a role in the signal transduction and homeostasis of calcium. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKgamma is expressed in heart and skeletal muscles, unlike MRCKalpha and MRCKbeta, which are expressed ubiquitously. Length = 331 |
| >gnl|CDD|132989 cd06658, STKc_PAK5, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5 | Back alignment and domain information |
|---|
Score = 116 bits (292), Expect = 2e-29
Identities = 83/276 (30%), Positives = 149/276 (53%), Gaps = 16/276 (5%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQI-RLYLSGQPNVVEF 89
+G G G+ + TE T + A K + + + R +++ E+ I R Y NVV+
Sbjct: 30 IGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQR---RELLFNEVVIMRDY--HHENVVDM 84
Query: 90 KSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRD 149
++Y + VVME EGG L D I+ +E ATV +++ A++ H+ GV+HRD
Sbjct: 85 YNSYLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIATVCLSVLRALSYLHNQGVIHRD 143
Query: 150 LKPENFSFISRDDNALLKVTDFG-SALLFEEGQVYRDIVGSGFYIAPEVLRR-RYGKEID 207
+K ++ S + +K++DFG A + +E + +VG+ +++APEV+ R YG E+D
Sbjct: 144 IKSDSILLTS---DGRIKLSDFGFCAQVSKEVPKRKSLVGTPYWMAPEVISRLPYGTEVD 200
Query: 208 IWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKD 267
IWS G+++ ++ G PP++ E I + + +SS + + ML ++
Sbjct: 201 IWSLGIMVIEMIDGEPPYFNEPPLQAMRRI-RDNLPPRVKDSHKVSSVLRGFLDLMLVRE 259
Query: 268 PKRRITAAQVLEHPWLRESGEASDDTSVILRMKQFR 303
P +R TA ++L+HP+L+ +G S ++ M+Q+R
Sbjct: 260 PSQRATAQELLQHPFLKLAGPPS---CIVPLMRQYR 292
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly expressed in the brain. It is not required for viability, but together with PAK6, it is required for normal levels of locomotion and activity, and for learning and memory. PAK5 cooperates with Inca (induced in neural crest by AP2) in the regulation of cell adhesion and cytoskeletal organization in the embryo and in neural crest cells during craniofacial development. PAK5 may also play a role in controlling the signaling of Raf-1, an effector of Ras, at the mitochondria. Length = 292 |
| >gnl|CDD|173662 cd05571, STKc_PKB, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B | Back alignment and domain information |
|---|
Score = 117 bits (294), Expect = 2e-29
Identities = 84/274 (30%), Positives = 135/274 (49%), Gaps = 37/274 (13%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKM--------RLAENDMIRREIQIRLYL 80
++LG+G FG L E +T + YA K I KK + L E+ +++
Sbjct: 1 KLLGKGTFGKVILVREKATGKYYAMK-ILKKEVIIAKDEVAHTLTESRVLQN-------- 51
Query: 81 SGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVC 140
+ P + K +++ + VME GG+LF + + SE A IV+A+
Sbjct: 52 TRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALGYL 111
Query: 141 HSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIV----GSGFYIAPE 196
HS V++RDLK EN D + +K+TDFG L +EG + G+ Y+APE
Sbjct: 112 HSCDVVYRDLKLENLML---DKDGHIKITDFG---LCKEGISDGATMKTFCGTPEYLAPE 165
Query: 197 VLRRR-YGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISST 255
VL YG+ +D W GV++Y ++ G PF+ + + ++ IL EI F ++S
Sbjct: 166 VLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPR----TLSPE 221
Query: 256 AKDLVRRMLTKDPKRRI-----TAAQVLEHPWLR 284
AK L+ +L KDPK+R+ A +++EH +
Sbjct: 222 AKSLLAGLLKKDPKQRLGGGPEDAKEIMEHRFFA 255
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having been implicated in tumor initiation, progression, and metastasis. Length = 323 |
| >gnl|CDD|132956 cd06625, STKc_MEKK3_like, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 115 bits (289), Expect = 3e-29
Identities = 74/262 (28%), Positives = 131/262 (50%), Gaps = 15/262 (5%)
Query: 28 GRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQ-PNV 86
G++LG+G FG YLC + T R A K + P + ++ E +I+L + Q +
Sbjct: 7 GKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERI 66
Query: 87 VEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVM 146
V++ D+ + + ME GG + D++ A G +E R I+ V HS ++
Sbjct: 67 VQYYGCLRDDETLSIFMEYMPGGSVKDQLKAYGALTETVTRKYTRQILEGVEYLHSNMIV 126
Query: 147 HRDLKPENFSFISRDDNALLKVTDFGSALLFE----EGQVYRDIVGSGFYIAPEVLR-RR 201
HRD+K N I RD +K+ DFG++ + G + + G+ ++++PEV+
Sbjct: 127 HRDIKGAN---ILRDSAGNVKLGDFGASKRLQTICSSGTGMKSVTGTPYWMSPEVISGEG 183
Query: 202 YGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPW--PSISSTAKDL 259
YG++ D+WS G + +L+ PP WAE + A + T+P +S A++
Sbjct: 184 YGRKADVWSVGCTVVEMLTEKPP-WAEFEAM---AAIFKIATQPTNPQLPSHVSPDARNF 239
Query: 260 VRRMLTKDPKRRITAAQVLEHP 281
+RR ++ K+R +A ++L H
Sbjct: 240 LRRTFVENAKKRPSAEELLRHF 261
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 263 |
| >gnl|CDD|173720 cd05631, STKc_GRK4, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4 | Back alignment and domain information |
|---|
Score = 115 bits (289), Expect = 4e-29
Identities = 85/275 (30%), Positives = 129/275 (46%), Gaps = 25/275 (9%)
Query: 24 HYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQ 83
HY R+LG+G FG C +T + YACK + KK + M E +I L
Sbjct: 4 HY---RVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRI-LEKVNS 59
Query: 84 PNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVC--- 140
VV YE + A+ +V+ + GGDL I YN RAI A +C
Sbjct: 60 RFVVSLAYAYETKDALCLVLTIMNGGDLKFHI----YNMGNPGFDEQRAIFYAAELCCGL 115
Query: 141 ---HSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEV 197
+++RDLKPEN I DD ++++D G A+ EG+ R VG+ Y+APEV
Sbjct: 116 EDLQRERIVYRDLKPEN---ILLDDRGHIRISDLGLAVQIPEGETVRGRVGTVGYMAPEV 172
Query: 198 LR-RRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPS-ISST 255
+ +Y D W G ++Y ++ G PF ++ + + + + D + + S
Sbjct: 173 INNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREEVDR-RVKEDQEEYSEKFSED 231
Query: 256 AKDLVRRMLTKDPKRRI-----TAAQVLEHPWLRE 285
AK + R +LTK+PK R+ AA V +HP +
Sbjct: 232 AKSICRMLLTKNPKERLGCRGNGAAGVKQHPIFKN 266
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found in the testis, but is also present in the cerebellum and kidney. It is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK4 polymorphisms are associated with hypertension and salt sensitivity, as they cause hyperphosphorylation, desensitization, and internalization of the dopamine 1 (D1) receptor while increasing the expression of the angiotensin II type 1 receptor. GRK4 plays a crucial role in the D1 receptor regulation of sodium excretion and blood pressure. Length = 285 |
| >gnl|CDD|132991 cd06917, STKc_NAK1_like, Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 115 bits (289), Expect = 5e-29
Identities = 73/269 (27%), Positives = 130/269 (48%), Gaps = 31/269 (11%)
Query: 30 MLGRGQFGVSYLCTENSTNRPYACKSI-AKKPKMRLAENDMIRREIQI--RLYLSGQPNV 86
++GRG +G Y T R A K I P +++ I+RE+ + +L S PN+
Sbjct: 8 LIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSD---IQREVALLSQLRQSQPPNI 64
Query: 87 VEFKSTYEDETAVHVVMELCEGGDLFDRIIAK-GYNSERDAATVLRAIVNAVNVCHSMGV 145
++ +Y + ++ME EGG + R + K G +E+ + ++R ++ A+ H +GV
Sbjct: 65 TKYYGSYLKGPRLWIIMEYAEGGSV--RTLMKAGPIAEKYISVIIREVLVALKYIHKVGV 122
Query: 146 MHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRD-IVGSGFYIAPEVLR--RRY 202
+HRD+K N ++ N L DFG A L + R VG+ +++APEV+ + Y
Sbjct: 123 IHRDIKAANI-LVTNTGNVKL--CDFGVAALLNQNSSKRSTFVGTPYWMAPEVITEGKYY 179
Query: 203 GKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAI-------LQGEIDFDTDPWPSISST 255
+ DIWS G+ +Y + +G PP+ I L+ S
Sbjct: 180 DTKADIWSLGITIYEMATGNPPYSDVDAFRAMMLIPKSKPPRLEDN---------GYSKL 230
Query: 256 AKDLVRRMLTKDPKRRITAAQVLEHPWLR 284
++ V L ++PK R++A ++L+ W++
Sbjct: 231 LREFVAACLDEEPKERLSAEELLKSKWIK 259
|
Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of centrin, and phosphorylates substrates in a Cdc31p-dependent manner. Length = 277 |
| >gnl|CDD|173737 cd07834, STKc_MAPK, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Score = 116 bits (292), Expect = 6e-29
Identities = 95/352 (26%), Positives = 138/352 (39%), Gaps = 96/352 (27%)
Query: 24 HYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMI---R--REIQIRL 78
Y + +G G +GV + T R A K K+ +D+I R REI++
Sbjct: 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIK------KISNVFDDLIDAKRILREIKLLR 54
Query: 79 YLSGQPNVVEFKS-----TYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAAT----- 128
+L N++ + ED V++V EL E DL ++I S +
Sbjct: 55 HL-RHENIIGLLDILRPPSPEDFNDVYIVTELMET-DL-HKVI----KSPQPLTDDHIQY 107
Query: 129 ----VLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSA----LLFEEG 180
+LR + HS V+HRDLKP N I + N LK+ DFG A +E
Sbjct: 108 FLYQILRGL----KYLHSANVIHRDLKPSN---ILVNSNCDLKICDFGLARGVDPDEDEK 160
Query: 181 QVYRDIVGSGFYIAPEVL--RRRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAIL 238
+ V + +Y APE+L RY K IDIWS G I LL+ P F G D I
Sbjct: 161 GFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLF-----PGR-DYID 214
Query: 239 QGEIDFDT-----------------------------DPW----PSISSTAKDLVRRMLT 265
Q + + P P S A DL+ +ML
Sbjct: 215 QLNLIVEVLGTPSEEDLKFITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLV 274
Query: 266 KDPKRRITAAQVLEHPWLRESGEASDDTS------------VILRMKQFRRM 305
DPK+RITA + L HP+L + + D+ L ++ + +
Sbjct: 275 FDPKKRITADEALAHPYLAQLHDPEDEPVAKPPFDFDFFDDDELTEEELKEL 326
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPK kinase (MAP2K or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAP3K or MKKK). Each cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. There are three main typical MAPK subfamilies: Extracellular signal-Regulated Kinase (ERK), c-Jun N-terminal Kinase (JNK), and p38. Some MAPKs are atypical in that they are not regulated by MAP2Ks. These include MAPK4, MAPK6, NLK, and ERK7. Length = 330 |
| >gnl|CDD|173772 cd08530, STKc_CNK2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains | Back alignment and domain information |
|---|
Score = 113 bits (285), Expect = 1e-28
Identities = 74/262 (28%), Positives = 119/262 (45%), Gaps = 26/262 (9%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREI---QIRLYLSGQ-PNV 86
LG+G +G Y S N+ YA K ++ L RE +IR+ S PN+
Sbjct: 8 LGKGSYGSVYKVKRLSDNQFYALK------EVDLGSMSQKEREDAVNEIRILASVNHPNI 61
Query: 87 VEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAAT-----VLRAIVNAVNVCH 141
+ +K + D + +VME GDL + I+K + + ++ + H
Sbjct: 62 ISYKEAFLDGNKLCIVMEYAPFGDLS-KAISKRKKKRKLIPEQEIWRIFIQLLRGLQALH 120
Query: 142 SMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLRRR 201
++HRDLK N I N L+K+ D G + + ++ I G+ Y+APEV + R
Sbjct: 121 EQKILHRDLKSAN---ILLVANDLVKIGDLGISKVLKKNMAKTQI-GTPHYMAPEVWKGR 176
Query: 202 -YGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSI-SSTAKDL 259
Y + DIWS G +LY + + PPF A + + + +G+ P P I S ++
Sbjct: 177 PYSYKSDIWSLGCLLYEMATFAPPFEARSMQDLRYKVQRGKY----PPIPPIYSQDLQNF 232
Query: 260 VRRMLTKDPKRRITAAQVLEHP 281
+R ML PK R ++L P
Sbjct: 233 IRSMLQVKPKLRPNCDKILASP 254
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, and it regulates cell size, through influencing the size threshold at which cells commit to mitosis. Length = 256 |
| >gnl|CDD|132978 cd06647, STKc_PAK_I, Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase | Back alignment and domain information |
|---|
Score = 113 bits (285), Expect = 2e-28
Identities = 81/277 (29%), Positives = 140/277 (50%), Gaps = 19/277 (6%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSI--AKKPKMRLAEND-MIRREIQIRLYLSGQPNVV 87
+G+G G Y + +T + A K + ++PK L N+ ++ RE + PN+V
Sbjct: 27 IGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENK-------HPNIV 79
Query: 88 EFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMH 147
+ +Y + VVME GG L D ++ + E A V R + A+ HS V+H
Sbjct: 80 NYLDSYLVGDELWVVMEYLAGGSLTD-VVTETCMDEGQIAAVCRECLQALEFLHSNQVIH 138
Query: 148 RDLKPENFSFISRDDNALLKVTDFG-SALLFEEGQVYRDIVGSGFYIAPEVL-RRRYGKE 205
RD+K +N I + +K+TDFG A + E +VG+ +++APEV+ R+ YG +
Sbjct: 139 RDIKSDN---ILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPK 195
Query: 206 IDIWSAGVILYILLSGVPPFWAETK-KGTYDAILQGEIDFDTDPWPSISSTAKDLVRRML 264
+DIWS G++ ++ G PP+ E + Y G + +S+ +D + R L
Sbjct: 196 VDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQNPE--KLSAIFRDFLNRCL 253
Query: 265 TKDPKRRITAAQVLEHPWLRESGEASDDTSVILRMKQ 301
D ++R +A ++L+HP+L+ + S T +I K+
Sbjct: 254 EMDVEKRGSAKELLQHPFLKIAKPLSSLTPLIAAAKE 290
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs, also called conventional PAKs, include PAK1, PAK2, and PAK3. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). They interact with the SH3 domain containing proteins Nck, Grb2 and PIX. Binding of group I PAKs to activated GTPases leads to conformational changes that destabilize the AID, allowing autophosphorylation and full activation of the kinase domain. Known group I PAK substrates include MLCK, Bad, Raf, MEK1, LIMK, Merlin, Vimentin, Myc, Stat5a, and Aurora A, among others. Length = 293 |
| >gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Score = 112 bits (281), Expect = 4e-28
Identities = 80/263 (30%), Positives = 128/263 (48%), Gaps = 16/263 (6%)
Query: 28 GRMLGRGQFGVSYLCTENSTNRPYACK--SIAKKPKMRLAENDMIRREIQIRLYLSGQPN 85
G +LG G FG Y +A K S+A + + +EI + L PN
Sbjct: 5 GELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQ-HPN 63
Query: 86 VVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVL--RAIVNAVNVCHSM 143
+V++ T +E +++ +EL GG L + K Y S + L R I+ + H
Sbjct: 64 IVQYLGTEREEDNLYIFLELVPGGSLAK--LLKKYGSFPEPVIRLYTRQILLGLEYLHDR 121
Query: 144 GVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLRRR-- 201
+HRD+K N I D N ++K+ DFG A E + GS +++APEV+ ++
Sbjct: 122 NTVHRDIKGAN---ILVDTNGVVKLADFGMAKQVVEFSFAKSFKGSPYWMAPEVIAQQGG 178
Query: 202 YGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWP-SISSTAKDLV 260
YG DIWS G + + +G PP W++ + A+ + + P P +S AKD +
Sbjct: 179 YGLAADIWSLGCTVLEMATGKPP-WSQLEG--VAAVFKIGRSKELPPIPDHLSDEAKDFI 235
Query: 261 RRMLTKDPKRRITAAQVLEHPWL 283
+ L +DP R TAA++LEHP++
Sbjct: 236 LKCLQRDPSLRPTAAELLEHPFV 258
|
Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258 |
| >gnl|CDD|173760 cd08220, STKc_Nek8, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8 | Back alignment and domain information |
|---|
Score = 111 bits (280), Expect = 5e-28
Identities = 78/258 (30%), Positives = 128/258 (49%), Gaps = 14/258 (5%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVE 88
R++GRG FG+ +LC + + K I + +M E + E Q+ L L PN++E
Sbjct: 6 RVVGRGAFGIVHLCRRKADQKLVIIKQIPVE-QMTKDERLAAQNECQV-LKLLSHPNIIE 63
Query: 89 FKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVN---AVNVCHSMGV 145
+ + ++ A+ +VME GG L I K NS D T+L V A++ H+ +
Sbjct: 64 YYENFLEDKALMIVMEYAPGGTLA-EYIQKRCNSLLDEDTILHFFVQILLALHHVHTKLI 122
Query: 146 MHRDLKPENFSFISRDDNALLKVTDFG-SALLFEEGQVYRDIVGSGFYIAPEVLRRR-YG 203
+HRDLK +N + + ++K+ DFG S +L + + Y +VG+ YI+PE+ + Y
Sbjct: 123 LHRDLKTQNI-LLDKHKM-VVKIGDFGISKILSSKSKAY-TVVGTPCYISPELCEGKPYN 179
Query: 204 KEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRM 263
++ DIW+ G +LY L S F A I+ G +D S + L+ M
Sbjct: 180 QKSDIWALGCVLYELASLKRAFEAANLPALVLKIMSGTFAPISD---RYSPDLRQLILSM 236
Query: 264 LTKDPKRRITAAQVLEHP 281
L DP +R +Q++ P
Sbjct: 237 LNLDPSKRPQLSQIMAQP 254
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with a rare form of juvenile renal cystic disease, nephronophthisis type 9. It has been suggested that a defect in the ciliary localization of Nek8 contributes to the development of cysts manifested by these diseases. Length = 256 |
| >gnl|CDD|173695 cd05604, STKc_SGK3, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3 | Back alignment and domain information |
|---|
Score = 113 bits (283), Expect = 7e-28
Identities = 79/264 (29%), Positives = 126/264 (47%), Gaps = 19/264 (7%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVE 88
+++G+G FG L + YA K + KK + E I E + L P +V
Sbjct: 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVG 60
Query: 89 FKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHR 148
+++ ++ V++ GG+LF + + E A I +A+ HS+ +++R
Sbjct: 61 LHYSFQTTEKLYFVLDFVNGGELFFHLQRERSFPEPRARFYAAEIASALGYLHSINIVYR 120
Query: 149 DLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIV----GSGFYIAPEVLRRR-YG 203
DLKPEN I D + +TDFG L +EG D G+ Y+APEV+R++ Y
Sbjct: 121 DLKPEN---ILLDSQGHVVLTDFG---LCKEGIAQSDTTTTFCGTPEYLAPEVIRKQPYD 174
Query: 204 KEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRM 263
+D W G +LY +L G+PPF+ YD IL + P S TA ++ +
Sbjct: 175 NTVDWWCLGAVLYEMLYGLPPFYCRDVAEMYDNILHKPLVLR----PGASLTAWSILEEL 230
Query: 264 LTKDPKRRITAA----QVLEHPWL 283
L KD +RR+ A ++ EHP+
Sbjct: 231 LEKDRQRRLGAKEDFLEIQEHPFF 254
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, and receptors. It plays a critical role in hair follicle morphogenesis and hair cycling. Length = 325 |
| >gnl|CDD|173694 cd05603, STKc_SGK2, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2 | Back alignment and domain information |
|---|
Score = 111 bits (279), Expect = 2e-27
Identities = 75/251 (29%), Positives = 122/251 (48%), Gaps = 15/251 (5%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVE 88
+++G+G FG L S YA K + KK ++ E + I E + L P +V
Sbjct: 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVG 60
Query: 89 FKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHR 148
+++ ++ V++ GG+LF + + E A + +A+ HS+ +++R
Sbjct: 61 LHYSFQTAEKLYFVLDYVNGGELFFHLQRERCFLEPRARFYAAEVASAIGYLHSLNIIYR 120
Query: 149 DLKPENFSFISRDDNALLKVTDFGSALLFEEG----QVYRDIVGSGFYIAPEVLRRR-YG 203
DLKPEN I D + +TDFG L +EG + G+ Y+APEVLR+ Y
Sbjct: 121 DLKPEN---ILLDSQGHVVLTDFG---LCKEGVEPEETTSTFCGTPEYLAPEVLRKEPYD 174
Query: 204 KEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRM 263
+ +D W G +LY +L G+PPF++ YD IL + + A DL+ +
Sbjct: 175 RTVDWWCLGAVLYEMLYGLPPFYSRDVSQMYDNILHKPLQLP----GGKTVAACDLLVGL 230
Query: 264 LTKDPKRRITA 274
L KD +RR+ A
Sbjct: 231 LHKDQRRRLGA 241
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. Length = 321 |
| >gnl|CDD|173616 PTZ00426, PTZ00426, cAMP-dependent protein kinase catalytic subunit; Provisional | Back alignment and domain information |
|---|
Score = 111 bits (279), Expect = 3e-27
Identities = 86/274 (31%), Positives = 134/274 (48%), Gaps = 23/274 (8%)
Query: 18 YEDVMLHYFFGRMLGRGQFGVSYLCT-ENSTNRPYACKSIAKKPKMRLAENDMIRREIQI 76
YED + F R LG G FG L T +N P A K K ++ + D + E +I
Sbjct: 29 YED----FNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKI 84
Query: 77 RLYLSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRA-IVN 135
Y++ P V +++DE+ +++V+E GG+ F + + D A IV
Sbjct: 85 LNYIN-HPFCVNLYGSFKDESYLYLVLEFVIGGEFFT-FLRRNKRFPNDVGCFYAAQIVL 142
Query: 136 AVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAP 195
S+ +++RDLKPEN D + +K+TDFG A + + + Y + G+ YIAP
Sbjct: 143 IFEYLQSLNIVYRDLKPENLLL---DKDGFIKMTDFGFAKVVDT-RTY-TLCGTPEYIAP 197
Query: 196 EVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISS 254
E+L +GK D W+ G+ +Y +L G PPF+A Y IL+G I F + +
Sbjct: 198 EILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPLLIYQKILEGIIYFPK----FLDN 253
Query: 255 TAKDLVRRMLTKDPKRRI-----TAAQVLEHPWL 283
K L++++L+ D +R A V EHPW
Sbjct: 254 NCKHLMKKLLSHDLTKRYGNLKKGAQNVKEHPWF 287
|
Length = 340 |
| >gnl|CDD|173693 cd05602, STKc_SGK1, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1 | Back alignment and domain information |
|---|
Score = 111 bits (278), Expect = 3e-27
Identities = 72/248 (29%), Positives = 122/248 (49%), Gaps = 9/248 (3%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVE 88
+++G+G FG L + + YA K + KK ++ E I E + L P +V
Sbjct: 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVG 60
Query: 89 FKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHR 148
+++ ++ V++ GG+LF + + E A I +A+ HS+ +++R
Sbjct: 61 LHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYR 120
Query: 149 DLKPENFSFISRDDNALLKVTDFG-SALLFEEGQVYRDIVGSGFYIAPEVLRRR-YGKEI 206
DLKPEN I D + +TDFG E G+ Y+APEVL ++ Y + +
Sbjct: 121 DLKPEN---ILLDSQGHIVLTDFGLCKENIEHNGTTSTFCGTPEYLAPEVLHKQPYDRTV 177
Query: 207 DIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTK 266
D W G +LY +L G+PPF++ YD IL + P+I+++A+ L+ +L K
Sbjct: 178 DWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQLK----PNITNSARHLLEGLLQK 233
Query: 267 DPKRRITA 274
D +R+ A
Sbjct: 234 DRTKRLGA 241
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt sensitivity, memory consolidation, and cardiac repolarization. A common SGK1 variant is associated with increased blood pressure and body weight. SGK1 may also contribute to tumor growth, neurodegeneration, fibrosing disease, and ischemia. Length = 325 |
| >gnl|CDD|173686 cd05595, STKc_PKB_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta | Back alignment and domain information |
|---|
Score = 110 bits (276), Expect = 5e-27
Identities = 83/263 (31%), Positives = 136/263 (51%), Gaps = 23/263 (8%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIR-LYLSGQPNVV 87
++LG+G FG L E +T R YA K + K+ + +A++++ + R L + P +
Sbjct: 1 KLLGKGTFGKVILVREKATGRYYAMKILRKE--VIIAKDEVAHTVTESRVLQNTRHPFLT 58
Query: 88 EFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMH 147
K ++ + VME GG+LF + + +E A IV+A+ HS V++
Sbjct: 59 ALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVY 118
Query: 148 RDLKPENFSFISRDDNALLKVTDFGSALLFEEG----QVYRDIVGSGFYIAPEVLRRR-Y 202
RD+K EN D + +K+TDFG L +EG + G+ Y+APEVL Y
Sbjct: 119 RDIKLENLML---DKDGHIKITDFG---LCKEGISDGATMKTFCGTPEYLAPEVLEDNDY 172
Query: 203 GKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRR 262
G+ +D W GV++Y ++ G PF+ + + ++ IL EI F ++S AK L+
Sbjct: 173 GRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPR----TLSPEAKSLLAG 228
Query: 263 MLTKDPKRRI-----TAAQVLEH 280
+L KDPK+R+ A +V+EH
Sbjct: 229 LLKKDPKQRLGGGPSDAKEVMEH 251
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in PKB-beta display normal growth weights but exhibit severe insulin resistance and diabetes, accompanied by lipoatrophy and B-cell failure. Length = 323 |
| >gnl|CDD|173666 cd05575, STKc_SGK, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase | Back alignment and domain information |
|---|
Score = 110 bits (277), Expect = 5e-27
Identities = 77/265 (29%), Positives = 130/265 (49%), Gaps = 19/265 (7%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVE 88
+++G+G FG L + + YA K + KK ++ E I E + L P +V
Sbjct: 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVG 60
Query: 89 FKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHR 148
+++ ++ V++ GG+LF + + E A I +A+ HS+ +++R
Sbjct: 61 LHYSFQTADKLYFVLDYVNGGELFFHLQRERSFPEPRARFYAAEIASALGYLHSLNIIYR 120
Query: 149 DLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIV----GSGFYIAPEVLRRR-YG 203
DLKPEN I D + +TDFG L +EG + G+ Y+APEVLR++ Y
Sbjct: 121 DLKPEN---ILLDSQGHVVLTDFG---LCKEGIEHSKTTSTFCGTPEYLAPEVLRKQPYD 174
Query: 204 KEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRM 263
+ +D W G +LY +L G+PPF++ YD IL + P+IS +A+ L+ +
Sbjct: 175 RTVDWWCLGAVLYEMLYGLPPFYSRDTAEMYDNILNKPLRLK----PNISVSARHLLEGL 230
Query: 264 LTKDPKRRITAA----QVLEHPWLR 284
L KD +R+ A ++ H +
Sbjct: 231 LQKDRTKRLGAKDDFLEIKNHVFFS 255
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell proliferation, and apoptosis. Length = 323 |
| >gnl|CDD|173713 cd05624, STKc_MRCK_beta, Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta | Back alignment and domain information |
|---|
Score = 110 bits (275), Expect = 9e-27
Identities = 81/256 (31%), Positives = 134/256 (52%), Gaps = 22/256 (8%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVE 88
+++GRG FG + T R YA K + K ++ AE R E + + Q +
Sbjct: 7 KVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQW-ITT 65
Query: 89 FKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNS--ERDAATVLRAIVNAVNVCHSMGVM 146
++DE +++VM+ GGDL +++K + E A + +V A++ H + +
Sbjct: 66 LHYAFQDENYLYLVMDYYVGGDLLT-LLSKFEDRLPEDMARFYIAEMVLAIHSIHQLHYV 124
Query: 147 HRDLKPENFSFISRDDNALLKVTDFGSAL-LFEEGQVYRDI-VGSGFYIAPEVLRR---- 200
HRD+KP+N + D N +++ DFGS L + ++G V + VG+ YI+PE+L+
Sbjct: 125 HRDIKPDN---VLLDMNGHIRLADFGSCLKMNQDGTVQSSVAVGTPDYISPEILQAMEDG 181
Query: 201 --RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPS----ISS 254
+YG E D WS GV +Y +L G PF+AE+ TY I+ E F +PS +S
Sbjct: 182 MGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQ---FPSHITDVSE 238
Query: 255 TAKDLVRRMLTKDPKR 270
AKDL++R++ +R
Sbjct: 239 EAKDLIQRLICSRERR 254
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues. Length = 331 |
| >gnl|CDD|173723 cd06605, PKc_MAPKK, Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase | Back alignment and domain information |
|---|
Score = 108 bits (271), Expect = 1e-26
Identities = 79/266 (29%), Positives = 122/266 (45%), Gaps = 27/266 (10%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFK 90
LG G GV T + A K+I + A I RE+ I L+ P +V F
Sbjct: 9 LGAGNSGVVSKVLHRPTGKIMAVKTIRLEIN--EAIQKQILRELDI-LHKCNSPYIVGFY 65
Query: 91 STYEDETAVHVVMELCEGGDLFDRII--AKGYNSERDAATVLRAIVNAVNVCHS-MGVMH 147
+ + + + ME +GG L D+I+ +G ER + A++ + H ++H
Sbjct: 66 GAFYNNGDISICMEYMDGGSL-DKILKEVQGRIPERILGKIAVAVLKGLTYLHEKHKIIH 124
Query: 148 RDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDI----VGSGFYIAPEVLR-RRY 202
RD+KP N SR +K+ DFG + GQ+ + VG+ Y+APE ++ Y
Sbjct: 125 RDVKPSNILVNSRGQ---IKLCDFGVS-----GQLVNSLAKTFVGTSSYMAPERIQGNDY 176
Query: 203 GKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAI---LQGEIDFDTDPWPS--ISSTAK 257
+ DIWS G+ L L +G P+ E D I LQ ++ PS S +
Sbjct: 177 SVKSDIWSLGLSLIELATGRFPYPPEND--PPDGIFELLQYIVNEPPPRLPSGKFSPDFQ 234
Query: 258 DLVRRMLTKDPKRRITAAQVLEHPWL 283
D V L KDP+ R + ++LEHP++
Sbjct: 235 DFVNLCLIKDPRERPSYKELLEHPFI 260
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity PKs that phosphorylate their downstream targets, MAPKs, at specific threonine and tyrosine residues. There are three MAPK subfamilies: extracellular signal-regulated kinase (ERK), c-Jun N-terminal kinase (JNK), and p38. In mammalian cells, there are seven MAPKKs (named MKK1-7) and 20 MAPKKKs. Each MAPK subfamily can be activated by at least two cognate MAPKKs and by multiple MAPKKKs. Length = 265 |
| >gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 108 bits (273), Expect = 1e-26
Identities = 81/296 (27%), Positives = 131/296 (44%), Gaps = 60/296 (20%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAEND-------MIRREIQIRLYLSGQ 83
+G G +G Y T A K K+R+ EN+ IR EI++ L
Sbjct: 7 IGEGTYGQVYKARNKKTGELVALK------KIRM-ENEKEGFPITAIR-EIKL-LQKLRH 57
Query: 84 PNVVEFKS--TYEDETAVHVVMELCEGGDLFDRIIAKGYN--SERDAATVLRAIVNAVNV 139
PN+V K T + + ++++V E + DL ++ +E ++ ++ +
Sbjct: 58 PNIVRLKEIVTSKGKGSIYMVFEYMDH-DL-TGLLDSPEVKFTESQIKCYMKQLLEGLQY 115
Query: 140 CHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLF--EEGQVYRDIVGSGFYIAPEV 197
HS G++HRD+K N I +++ +LK+ DFG A + Y + V + +Y PE+
Sbjct: 116 LHSNGILHRDIKGSN---ILINNDGVLKLADFGLARPYTKRNSADYTNRVITLWYRPPEL 172
Query: 198 L--RRRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQ--GEIDFDTDPWPS-- 251
L RYG E+D+WS G IL L G P F T+ + I + G + WP
Sbjct: 173 LLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSP--TDENWPGVS 230
Query: 252 -------------------------ISSTAKDLVRRMLTKDPKRRITAAQVLEHPW 282
I +A DL+ ++LT DPK+RI+A Q L+H +
Sbjct: 231 KLPWFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQHEY 286
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287 |
| >gnl|CDD|132986 cd06655, STKc_PAK2, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2 | Back alignment and domain information |
|---|
Score = 108 bits (271), Expect = 1e-26
Identities = 81/283 (28%), Positives = 144/283 (50%), Gaps = 19/283 (6%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSI--AKKPKMRLAEND-MIRREIQIRLYLSGQPNVV 87
+G+G G + + +T + A K I K+PK L N+ ++ +E++ PN+V
Sbjct: 27 IGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELK-------NPNIV 79
Query: 88 EFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMH 147
F ++ + VVME GG L D ++ + E A V R + A+ H+ V+H
Sbjct: 80 NFLDSFLVGDELFVVMEYLAGGSLTD-VVTETCMDEAQIAAVCRECLQALEFLHANQVIH 138
Query: 148 RDLKPENFSFISRDDNALLKVTDFG-SALLFEEGQVYRDIVGSGFYIAPEVLRRR-YGKE 205
RD+K +N + + +K+TDFG A + E +VG+ +++APEV+ R+ YG +
Sbjct: 139 RDIKSDN---VLLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPK 195
Query: 206 IDIWSAGVILYILLSGVPPFWAETK-KGTYDAILQGEIDFDTDPWPSISSTAKDLVRRML 264
+DIWS G++ ++ G PP+ E + Y G + +S +D + R L
Sbjct: 196 VDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQNP--EKLSPIFRDFLNRCL 253
Query: 265 TKDPKRRITAAQVLEHPWLRESGEASDDTSVILRMKQFRRMNK 307
D ++R +A ++L+HP+L+ + S T +IL K+ + N+
Sbjct: 254 EMDVEKRGSAKELLQHPFLKLAKPLSSLTPLILAAKEAMKSNR 296
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK2 plays a role in pro-apoptotic signaling. It is cleaved and activated by caspases leading to morphological changes during apoptosis. PAK2 is also activated in response to a variety of stresses including DNA damage, hyperosmolarity, serum starvation, and contact inhibition, and may play a role in coordinating the stress response. PAK2 also contributes to cancer cell invasion through a mechanism distinct from that of PAK1. Length = 296 |
| >gnl|CDD|173758 cd08218, STKc_Nek1, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1 | Back alignment and domain information |
|---|
Score = 107 bits (268), Expect = 2e-26
Identities = 72/263 (27%), Positives = 134/263 (50%), Gaps = 24/263 (9%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFK 90
+G G FG + L + Y K I KM E + R+E+ + + PN+V+++
Sbjct: 8 IGEGSFGKAILVKSKEDGKQYVIKEINIS-KMSPKEREESRKEVAVLSNMK-HPNIVQYQ 65
Query: 91 STYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVN-AVNVC------HSM 143
++E+ +++VM+ CEGGDL+ +I N++R I++ V +C H
Sbjct: 66 ESFEENGNLYIVMDYCEGGDLYKKI-----NAQRGVLFPEDQILDWFVQICLALKHVHDR 120
Query: 144 GVMHRDLKPENFSFISRDDNALLKVTDFGSA-LLFEEGQVYRDIVGSGFYIAPEVLRRR- 201
++HRD+K +N F+++D +K+ DFG A +L ++ R +G+ +Y++PE+ R
Sbjct: 121 KILHRDIKSQNI-FLTKD--GTIKLGDFGIARVLNSTVELARTCIGTPYYLSPEICENRP 177
Query: 202 YGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPS-ISSTAKDLV 260
Y + DIW+ G +LY + + F A K I++G P S S ++LV
Sbjct: 178 YNNKSDIWALGCVLYEMCTLKHAFEAGNMKNLVLKIIRGSY----PPVSSHYSYDLRNLV 233
Query: 261 RRMLTKDPKRRITAAQVLEHPWL 283
++ ++P+ R + +LE ++
Sbjct: 234 SQLFKRNPRDRPSVNSILEKNFI 256
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycystic kidney disease, which is characterized by benign polycystic tumors formed by abnormal overgrowth of renal epithelial cells. It appears also to be involved in DNA damage response, and may be important for both correct DNA damage checkpoint activation and DNA repair. Length = 256 |
| >gnl|CDD|132987 cd06656, STKc_PAK3, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3 | Back alignment and domain information |
|---|
Score = 108 bits (270), Expect = 2e-26
Identities = 82/277 (29%), Positives = 143/277 (51%), Gaps = 19/277 (6%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACK--SIAKKPKMRLAEND-MIRREIQIRLYLSGQPNVV 87
+G+G G Y + +T + A K ++ ++PK L N+ ++ RE + PN+V
Sbjct: 27 IGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRE-------NKNPNIV 79
Query: 88 EFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMH 147
+ +Y + VVME GG L D ++ + E A V R + A++ HS V+H
Sbjct: 80 NYLDSYLVGDELWVVMEYLAGGSLTD-VVTETCMDEGQIAAVCRECLQALDFLHSNQVIH 138
Query: 148 RDLKPENFSFISRDDNALLKVTDFG-SALLFEEGQVYRDIVGSGFYIAPEVLRRR-YGKE 205
RD+K +N + D + +K+TDFG A + E +VG+ +++APEV+ R+ YG +
Sbjct: 139 RDIKSDNI-LLGMDGS--VKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPK 195
Query: 206 IDIWSAGVILYILLSGVPPFWAETK-KGTYDAILQGEIDFDTDPWPSISSTAKDLVRRML 264
+DIWS G++ ++ G PP+ E + Y G + +S+ +D + R L
Sbjct: 196 VDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQNP--ERLSAVFRDFLNRCL 253
Query: 265 TKDPKRRITAAQVLEHPWLRESGEASDDTSVILRMKQ 301
D RR +A ++L+HP+L+ + S T +I+ K+
Sbjct: 254 EMDVDRRGSAKELLQHPFLKLAKPLSSLTPLIIAAKE 290
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK3 is highly expressed in the brain. It is implicated in neuronal plasticity, synapse formation, dendritic spine morphogenesis, cell cycle progression, neuronal migration, and apoptosis. Inactivating mutations in the PAK3 gene cause X-linked non-syndromic mental retardation, the severity of which depends on the site of the mutation. Length = 297 |
| >gnl|CDD|132982 cd06651, STKc_MEKK3, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3 | Back alignment and domain information |
|---|
Score = 107 bits (268), Expect = 2e-26
Identities = 76/264 (28%), Positives = 131/264 (49%), Gaps = 16/264 (6%)
Query: 28 GRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQ-PNV 86
G++LG+G FG YLC + T R A K + P+ ++ E +I+L + Q +
Sbjct: 7 GKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERI 66
Query: 87 VEFKSTYED--ETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMG 144
V++ D E + + ME GG + D++ A G +E R I+ ++ HS
Sbjct: 67 VQYYGCLRDRAEKTLTIFMEYMPGGSVKDQLKAYGALTESVTRKYTRQILEGMSYLHSNM 126
Query: 145 VMHRDLKPENFSFISRDDNALLKVTDFGSALLFE----EGQVYRDIVGSGFYIAPEVLR- 199
++HRD+K N I RD +K+ DFG++ + G R + G+ ++++PEV+
Sbjct: 127 IVHRDIKGAN---ILRDSAGNVKLGDFGASKRLQTICMSGTGIRSVTGTPYWMSPEVISG 183
Query: 200 RRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPS-ISSTAKD 258
YG++ D+WS G + +L+ PP WAE + AI + PS IS A+D
Sbjct: 184 EGYGRKADVWSLGCTVVEMLTEKPP-WAEYE--AMAAIFKIATQPTNPQLPSHISEHARD 240
Query: 259 LVRRMLTKDPKRRITAAQVLEHPW 282
+ + + + R +A ++L HP+
Sbjct: 241 FLGCIFV-EARHRPSAEELLRHPF 263
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. In addition, MEKK3 is involved in interleukin-1 receptor and Toll-like receptor 4 signaling. It is also a specific regulator of the proinflammatory cytokines IL-6 and GM-CSF in some immune cells. MEKK3 also regulates calcineurin, which plays a critical role in T cell activation, apoptosis, skeletal myocyte differentiation, and cardiac hypertrophy. Length = 266 |
| >gnl|CDD|88524 cd05623, STKc_MRCK_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha | Back alignment and domain information |
|---|
Score = 108 bits (271), Expect = 3e-26
Identities = 81/256 (31%), Positives = 133/256 (51%), Gaps = 22/256 (8%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVE 88
+++GRG FG + + ++ +A K + K ++ AE R E + L +
Sbjct: 7 KVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDV-LVNGDNQWITT 65
Query: 89 FKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNS--ERDAATVLRAIVNAVNVCHSMGVM 146
++DE +++VM+ GGDL +++K + E A L +V A++ H + +
Sbjct: 66 LHYAFQDENNLYLVMDYYVGGDLLT-LLSKFEDRLPEDMARFYLAEMVIAIDSVHQLHYV 124
Query: 147 HRDLKPENFSFISRDDNALLKVTDFGSAL-LFEEGQVYRDI-VGSGFYIAPEVL------ 198
HRD+KP+N I D N +++ DFGS L L E+G V + VG+ YI+PE+L
Sbjct: 125 HRDIKPDN---ILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEDG 181
Query: 199 RRRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPS----ISS 254
+ +YG E D WS GV +Y +L G PF+AE+ TY I+ + F +P+ +S
Sbjct: 182 KGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQ---FPAQVTDVSE 238
Query: 255 TAKDLVRRMLTKDPKR 270
AKDL+RR++ R
Sbjct: 239 DAKDLIRRLICSREHR 254
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathway. Length = 332 |
| >gnl|CDD|173678 cd05587, STKc_cPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C | Back alignment and domain information |
|---|
Score = 108 bits (271), Expect = 3e-26
Identities = 82/271 (30%), Positives = 132/271 (48%), Gaps = 26/271 (9%)
Query: 27 FGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAEND----MIRREIQIRLYLSG 82
F +LG+G FG L T+ YA K I KK + + ++D M+ + + L L G
Sbjct: 4 FLMVLGKGSFGKVMLAERKGTDELYAIK-ILKKDVI-IQDDDVECTMVEKRV---LALPG 58
Query: 83 QPN-VVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCH 141
+P + + S ++ ++ VME GGDL I G E A I + H
Sbjct: 59 KPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGKFKEPHAVFYAAEIAIGLFFLH 118
Query: 142 SMGVMHRDLKPENFSFISRDDNALLKVTDFGSAL--LFEEGQVYRDIVGSGFYIAPE-VL 198
S G+++RDLK +N + D +K+ DFG +F G+ R G+ YIAPE +
Sbjct: 119 SKGIIYRDLKLDN---VMLDAEGHIKIADFGMCKENIFG-GKTTRTFCGTPDYIAPEIIA 174
Query: 199 RRRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKD 258
+ YGK +D W+ GV+LY +L+G PPF E + + +I++ + + S+S A
Sbjct: 175 YQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYPK----SLSKEAVS 230
Query: 259 LVRRMLTKDPKRRITAA-----QVLEHPWLR 284
+ + +LTK P +R+ + EH + R
Sbjct: 231 ICKGLLTKHPAKRLGCGPTGERDIREHAFFR 261
|
Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory domain. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. cPKCs are potent kinases for histones, myelin basic protein, and protamine. PKC-gamma is mainly expressed in neuronal tissues. It plays a role in protection from ischemia. Length = 324 |
| >gnl|CDD|173683 cd05592, STKc_nPKC_theta_delta, Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta | Back alignment and domain information |
|---|
Score = 107 bits (269), Expect = 5e-26
Identities = 80/270 (29%), Positives = 132/270 (48%), Gaps = 30/270 (11%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAEND----MIRREIQIRLYLSGQ- 83
++LG+G FG L TN +A K++ K + L ++D M+ R + L L+ +
Sbjct: 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKD--VVLEDDDVECTMVERRV---LALAWEH 55
Query: 84 PNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSM 143
P + T++ + + VME GGDL I + G E A I+ + H
Sbjct: 56 PFLTHLFCTFQTKEHLFFVMEYLNGGDLMFHIQSSGRFDEARARFYAAEIICGLQFLHKK 115
Query: 144 GVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGF-----YIAPEVL 198
G+++RDLK +N + D + +K+ DFG + + S F YIAPE+L
Sbjct: 116 GIIYRDLKLDN---VLLDKDGHIKIADFGMCKE----NMNGEGKASTFCGTPDYIAPEIL 168
Query: 199 R-RRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPS-ISSTA 256
+ ++Y + +D WS GV+LY +L G PF E + +D+IL D +P IS A
Sbjct: 169 KGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDEDELFDSILN-----DRPHFPRWISKEA 223
Query: 257 KDLVRRMLTKDPKRRI-TAAQVLEHPWLRE 285
KD + ++ +DP +R+ + +HP+ R
Sbjct: 224 KDCLSKLFERDPTKRLGVDGDIRQHPFFRG 253
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. Length = 316 |
| >gnl|CDD|173680 cd05589, STKc_PKN, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N | Back alignment and domain information |
|---|
Score = 107 bits (269), Expect = 6e-26
Identities = 79/273 (28%), Positives = 127/273 (46%), Gaps = 37/273 (13%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLS--GQPNVVE 88
LGRG FG L T YA K++ K + E + + E +I + P +V
Sbjct: 7 LGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVN 66
Query: 89 FKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVC------HS 142
+ ++ E V VME GGDL I D + RA+ A V H
Sbjct: 67 LFACFQTEDHVCFVMEYAAGGDLMMHI-------HTDVFSEPRAVFYAACVVLGLQYLHE 119
Query: 143 MGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRD----IVGSGFYIAPEVL 198
+++RDLK +N + D +K+ DFG L +EG + D G+ ++APEVL
Sbjct: 120 NKIVYRDLKLDN---LLLDTEGFVKIADFG---LCKEGMGFGDRTSTFCGTPEFLAPEVL 173
Query: 199 -RRRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWP-SISSTA 256
Y + +D W GV++Y +L G PF + ++ +D+I+ E+ +P +S A
Sbjct: 174 TETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEEVFDSIVNDEV-----RYPRFLSREA 228
Query: 257 KDLVRRMLTKDPKRRI-----TAAQVLEHPWLR 284
++RR+L ++P+RR+ A V + P+ R
Sbjct: 229 ISIMRRLLRRNPERRLGSGEKDAEDVKKQPFFR 261
|
Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved in many biological processes including cytokeletal regulation, cell adhesion, vesicle transport, glucose transport, regulation of meiotic maturation and embryonic cell cycles, signaling to the nucleus, and tumorigenesis. Length = 324 |
| >gnl|CDD|173716 cd05627, STKc_NDR2, Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2 | Back alignment and domain information |
|---|
Score = 107 bits (269), Expect = 8e-26
Identities = 87/295 (29%), Positives = 134/295 (45%), Gaps = 45/295 (15%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVE 88
+++GRG FG L + T YA K + K + + IR E I + G V
Sbjct: 7 KVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKM 66
Query: 89 FKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHR 148
F S ++D+ ++++ME GGD+ ++ K SE + V A++ H +G +HR
Sbjct: 67 FYS-FQDKRNLYLIMEFLPGGDMMTLLMKKDTLSEEATQFYIAETVLAIDAIHQLGFIHR 125
Query: 149 DLKPENFSFISRDDNALLKVTDFGSALLFEEG---QVYRDI------------------- 186
D+KP+N D +K++DFG ++ + YR++
Sbjct: 126 DIKPDNLLL---DAKGHVKLSDFGLCTGLKKAHRTEFYRNLTHNPPSDFSFQNMNSKRKA 182
Query: 187 --------------VGSGFYIAPEV-LRRRYGKEIDIWSAGVILYILLSGVPPFWAETKK 231
VG+ YIAPEV ++ Y K D WS GVI+Y +L G PPF +ET +
Sbjct: 183 ETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSETPQ 242
Query: 232 GTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLE---HPWL 283
TY ++ + P IS AKDL+ R T D + RI + V E HP+
Sbjct: 243 ETYRKVMNWKETLVFPPEVPISEKAKDLILRFCT-DSENRIGSNGVEEIKSHPFF 296
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regulating neuronal growth and differentiation, as well as in facilitating neurite outgrowth. It is also implicated in fear conditioning as it contributes to the coupling of neuronal morphological changes with fear-memory consolidation. NDR2 is also referred to as STK38-like. Length = 360 |
| >gnl|CDD|173771 cd08529, STKc_FA2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains | Back alignment and domain information |
|---|
Score = 105 bits (263), Expect = 9e-26
Identities = 69/257 (26%), Positives = 120/257 (46%), Gaps = 12/257 (4%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFK 90
+G+G FGV + + R YA K I R + I E ++ L ++ +
Sbjct: 8 IGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAID-EARVLAKLD-SSYIIRYY 65
Query: 91 STYEDETAVHVVMELCEGGDLFDRIIAKGYN--SERDAATVLRAIVNAVNVCHSMGVMHR 148
++ D+ +++VME E GDL + + E I+ + HS ++HR
Sbjct: 66 ESFLDKGKLNIVMEYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSKKILHR 125
Query: 149 DLKPENFSFISRDDNALLKVTDFGSALLFEEGQVY-RDIVGSGFYIAPEVLRRR-YGKEI 206
D+K N F+ DN +K+ D G A L + + IVG+ +Y++PE+ + Y ++
Sbjct: 126 DIKSLNL-FLDAYDN--VKIGDLGVAKLLSDNTNFANTIVGTPYYLSPELCEDKPYNEKS 182
Query: 207 DIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTK 266
D+W+ GV+LY +G PF A + I++G + + S L+ + LTK
Sbjct: 183 DVWALGVVLYECCTGKHPFDANNQGALILKIIRGVFPPVSQMY---SQQLAQLIDQCLTK 239
Query: 267 DPKRRITAAQVLEHPWL 283
D ++R Q+L +P L
Sbjct: 240 DYRQRPDTFQLLRNPSL 256
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cycle progression. No cellular function has yet been ascribed to CNK4. Length = 256 |
| >gnl|CDD|173684 cd05593, STKc_PKB_gamma, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma | Back alignment and domain information |
|---|
Score = 107 bits (267), Expect = 1e-25
Identities = 89/325 (27%), Positives = 156/325 (48%), Gaps = 32/325 (9%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIR-LYLSGQPNVV 87
++LG+G FG L E ++ + YA K + K+ + +A++++ + R L + P +
Sbjct: 1 KLLGKGTFGKVILVREKASGKYYAMKILKKE--VIIAKDEVAHTLTESRVLKNTRHPFLT 58
Query: 88 EFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMH 147
K +++ + + VME GG+LF + + SE IV+A++ HS +++
Sbjct: 59 SLKYSFQTKDRLCFVMEYVNGGELFFHLSRERVFSEDRTRFYGAEIVSALDYLHSGKIVY 118
Query: 148 RDLKPENFSFISRDDNALLKVTDFGSALLFEEG----QVYRDIVGSGFYIAPEVLRRR-Y 202
RDLK EN D + +K+TDFG L +EG + G+ Y+APEVL Y
Sbjct: 119 RDLKLENLML---DKDGHIKITDFG---LCKEGITDAATMKTFCGTPEYLAPEVLEDNDY 172
Query: 203 GKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRR 262
G+ +D W GV++Y ++ G PF+ + + ++ IL +I F ++S+ AK L+
Sbjct: 173 GRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEDIKFPR----TLSADAKSLLSG 228
Query: 263 MLTKDPKRRITAAQVLEHPWLRESGEASDDTSVILRMKQFRRMNKLKKLTIKVIVEYLPD 322
+L KDP +R+ G DD I+R F +N K++ + P
Sbjct: 229 LLIKDPNKRL--------------GGGPDDAKEIMRHSFFTGVNWQDVYDKKLVPPFKPQ 274
Query: 323 EETQALKEKFIEMDTDKNGTLSYDE 347
++ F E T + T++ E
Sbjct: 275 VTSETDTRYFDEEFTAQTITITPPE 299
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulated in estrogen-deficient breast cancer cells, androgen-independent prostate cancer cells, and primary ovarian tumors. It acts as a key mediator in the genesis of ovarian cancer. Length = 328 |
| >gnl|CDD|132953 cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Score = 105 bits (264), Expect = 1e-25
Identities = 88/286 (30%), Positives = 132/286 (46%), Gaps = 40/286 (13%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDM--IRREIQIRLYLSGQPNVVE 88
LG+G +G Y T A K I ++ L E+ I E+ I L+ + P +V+
Sbjct: 9 LGKGNYGSVYKVLHRPTGVTMAMKEI----RLELDESKFNQIIMELDI-LHKAVSPYIVD 63
Query: 89 FKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAV-----NVCHSM 143
F + E AV++ ME + G L D++ A G +E VLR I AV +
Sbjct: 64 FYGAFFIEGAVYMCMEYMDAGSL-DKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEH 122
Query: 144 GVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDI----VGSGFYIAPEVLR 199
++HRD+KP N + + N +K+ DFG + G + + +G Y+APE ++
Sbjct: 123 NIIHRDVKPTN---VLVNGNGQVKLCDFGVS-----GNLVASLAKTNIGCQSYMAPERIK 174
Query: 200 R-------RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAI---LQGEIDFDTDPW 249
Y + D+WS G+ + + G P+ ET Y I L +D D
Sbjct: 175 SGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPET----YANIFAQLSAIVDGDPPTL 230
Query: 250 PS-ISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASDDTS 294
PS S A+D V + L K P RR T AQ+LEHPWL + A D +
Sbjct: 231 PSGYSDDAQDFVAKCLNKIPNRRPTYAQLLEHPWLVKYKNADVDMA 276
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Polymyxin B resistance protein 2 (PBS2) from Saccharomyces cerevisiae, Wis1 from Schizosaccharomyces pombe, and related proteins. PBS2 and Wis1 are components of stress-activated MAPK cascades in budding and fission yeast, respectively. PBS2 is the specific activator of the MAPK Hog1, which plays a central role in the response of budding yeast to stress including exposure to arsenite and hyperosmotic environments. Wis1 phosphorylates and activates the MAPK Sty1 (also called Spc1 or Phh1), which stimulates a transcriptional response to a wide range of cellular insults through the bZip transcription factors Atf1, Pcr1, and Pap1. Length = 286 |
| >gnl|CDD|173685 cd05594, STKc_PKB_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha | Back alignment and domain information |
|---|
Score = 105 bits (263), Expect = 3e-25
Identities = 82/261 (31%), Positives = 137/261 (52%), Gaps = 18/261 (6%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIR-LYLSGQPNVV 87
++LG+G FG L E +T R YA K + K+ + +A++++ + R L S P +
Sbjct: 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKE--VIVAKDEVAHTLTENRVLQNSRHPFLT 58
Query: 88 EFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHS-MGVM 146
K +++ + VME GG+LF + + SE A IV+A++ HS V+
Sbjct: 59 ALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVV 118
Query: 147 HRDLKPENFSFISRDDNALLKVTDFG-SALLFEEGQVYRDIVGSGFYIAPEVLRRR-YGK 204
+RDLK EN D + +K+TDFG ++G + G+ Y+APEVL YG+
Sbjct: 119 YRDLKLENLML---DKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDYGR 175
Query: 205 EIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRML 264
+D W GV++Y ++ G PF+ + + ++ IL EI F ++S AK L+ +L
Sbjct: 176 AVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPR----TLSPEAKSLLSGLL 231
Query: 265 TKDPKRRI-----TAAQVLEH 280
KDPK+R+ A ++++H
Sbjct: 232 KKDPKQRLGGGPDDAKEIMQH 252
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficient in PKB-alpha exhibit perinatal morbidity, growth retardation, reduction in body weight accompanied by reduced sizes of multiple organs, and enhanced apoptosis in some cell types. PKB-alpha activity has been reported to be frequently elevated in breast and prostate cancers. In some cancer cells, PKB-alpha may act as a suppressor of metastasis. Length = 325 |
| >gnl|CDD|173681 cd05590, STKc_nPKC_eta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta | Back alignment and domain information |
|---|
Score = 105 bits (263), Expect = 3e-25
Identities = 80/274 (29%), Positives = 128/274 (46%), Gaps = 33/274 (12%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVE 88
R+LG+G FG L + R YA K + K ++ + + E +I P + +
Sbjct: 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQ 60
Query: 89 FKSTYEDETAVHVVMELCEGGDL---------FDRIIAKGYNSERDAATVLRAIVNAVNV 139
++ + VME GGDL FD A+ Y +E I +A+
Sbjct: 61 LYCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAE---------ITSALMF 111
Query: 140 CHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALL-FEEGQVYRDIVGSGFYIAPEVL 198
H G+++RDLK +N + D K+ DFG G+ G+ YIAPE+L
Sbjct: 112 LHDKGIIYRDLKLDN---VLLDHEGHCKLADFGMCKEGIFNGKTTSTFCGTPDYIAPEIL 168
Query: 199 RRR-YGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAK 257
+ YG +D W+ GV+LY +L G PF AE + ++AIL E+ + T W +S A
Sbjct: 169 QEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVYPT--W--LSQDAV 224
Query: 258 DLVRRMLTKDPKRRITA------AQVLEHPWLRE 285
D+++ +TK+P R+ + +L HP+ +E
Sbjct: 225 DILKAFMTKNPTMRLGSLTLGGEEAILRHPFFKE 258
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signaling of cell-type specific differentiation. It is also expressed in pro-B cells and early-stage thymocytes, and acts as a key regulator in early B-cell development. PKC-eta increases glioblastoma multiforme (GBM) proliferation and resistance to radiation, and is being developed as a therapeutic target for the management of GBM. Length = 320 |
| >gnl|CDD|173676 cd05585, STKc_YPK1_like, Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 105 bits (263), Expect = 3e-25
Identities = 77/258 (29%), Positives = 123/258 (47%), Gaps = 13/258 (5%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFK 90
+G+G FG + T R YA K+I K + +E E + L P +V K
Sbjct: 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTV-LAQVNCPFIVPLK 59
Query: 91 STYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDL 150
+++ +++V+ GG+LF + +G A ++ A+ H V++RDL
Sbjct: 60 FSFQSPEKLYLVLAFINGGELFHHLQREGRFDLSRARFYTAELLCALENLHKFNVIYRDL 119
Query: 151 KPENFSFISRDDNALLKVTDFG-SALLFEEGQVYRDIVGSGFYIAPEVLRRR-YGKEIDI 208
KPEN I D + + DFG L ++ G+ Y+APE+L Y K +D
Sbjct: 120 KPEN---ILLDYQGHIALCDFGLCKLNMKDDDKTNTFCGTPEYLAPELLLGHGYTKAVDW 176
Query: 209 WSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKDP 268
W+ GV+LY +L+G+PPF+ E Y ILQ + F AKDL+ +L++DP
Sbjct: 177 WTLGVLLYEMLTGLPPFYDENVNEMYRKILQEPLRFPD----GFDRDAKDLLIGLLSRDP 232
Query: 269 KRRI---TAAQVLEHPWL 283
RR+ A ++ HP+
Sbjct: 233 TRRLGYNGAQEIKNHPFF 250
|
Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It plays a role in cell growth and sexual development. Length = 312 |
| >gnl|CDD|173735 cd07831, STKc_MOK, Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase | Back alignment and domain information |
|---|
Score = 104 bits (261), Expect = 3e-25
Identities = 79/288 (27%), Positives = 123/288 (42%), Gaps = 49/288 (17%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFK 90
+G G F T + YA K + K + E REIQ LS PN++
Sbjct: 7 IGEGTFSEVLKAQSRKTGKYYAIKCM--KKHFKSLEQVNNLREIQALRRLSPHPNILRLI 64
Query: 91 STYEDETA--VHVVMELCEGGDLFDRIIAKG---YNSERDAATVLRAIVNAVNVCHSMGV 145
D + +V EL + +L++ I KG E+ + + ++ +++ H G+
Sbjct: 65 EVLFDRKTGRLALVFELMDM-NLYELI--KGRKRPLPEKRVKSYMYQLLKSLDHMHRNGI 121
Query: 146 MHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLRR--RYG 203
HRD+KPEN I D+ +LK+ DFGS Y + + + +Y APE L YG
Sbjct: 122 FHRDIKPEN---ILIKDD-ILKLADFGSCRGIYSKPPYTEYISTRWYRAPECLLTDGYYG 177
Query: 204 KEIDIWSAGVILYILLSGVPPFWAETKK----------GTYDAILQGEIDFDTDPW---- 249
++DIW+ G + + +LS P F + GT DA E+
Sbjct: 178 PKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDA----EVLKKFRKSRHMN 233
Query: 250 ---------------PSISSTAKDLVRRMLTKDPKRRITAAQVLEHPW 282
P+ S+ DL++++L DP RITA Q L HP+
Sbjct: 234 YNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALRHPY 281
|
Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. Length = 282 |
| >gnl|CDD|132942 cd06611, STKc_SLK_like, Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 104 bits (260), Expect = 5e-25
Identities = 84/270 (31%), Positives = 125/270 (46%), Gaps = 22/270 (8%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFK 90
LG G FG Y T A K I + + L E+ M+ EI I L PN+V
Sbjct: 13 LGDGAFGKVYKAQHKETGLFAAAKIIQIESEEEL-EDFMV--EIDI-LSECKHPNIVGLY 68
Query: 91 STYEDETAVHVVMELCEGGDLFDRIIA--KGYNSERDAATVLRAIVNAVNVCHSMGVMHR 148
Y E + +++E C+GG L ++ +G E V R ++ A+N HS V+HR
Sbjct: 69 EAYFYENKLWILIEFCDGGALDSIMLELERGLT-EPQIRYVCRQMLEALNFLHSHKVIHR 127
Query: 149 DLKPENFSFISRDDNALLKVTDFG-SALLFEEGQVYRDIVGSGFYIAPEVL------RRR 201
DLK N ++ D + +K+ DFG SA Q +G+ +++APEV+
Sbjct: 128 DLKAGNI-LLTLDGD--VKLADFGVSAKNKSTLQKRDTFIGTPYWMAPEVVACETFKDNP 184
Query: 202 YGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDP--WPSISSTAKDL 259
Y + DIWS G+ L L PP IL+ E P W SS+ D
Sbjct: 185 YDYKADIWSLGITLIELAQMEPPHHELNPMRVLLKILKSEPPTLDQPSKW---SSSFNDF 241
Query: 260 VRRMLTKDPKRRITAAQVLEHPWLRESGEA 289
++ L KDP R TAA++L+HP++ + +
Sbjct: 242 LKSCLVKDPDDRPTAAELLKHPFVSDQSDN 271
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. SmSLK is capable of activating the MAPK Jun N-terminal kinase (JNK) pathway in human embryonic kidney (HEK) cells as well as in Xenopus oocytes. It may participate in regulating MAPK cascades during host-parasite interactions. Length = 280 |
| >gnl|CDD|173673 cd05582, STKc_RSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Score = 103 bits (259), Expect = 1e-24
Identities = 76/255 (29%), Positives = 133/255 (52%), Gaps = 20/255 (7%)
Query: 29 RMLGRGQFGVSYLC---TENSTNRPYACKSIAKKP-KMRLAENDMIRREIQIRLYLSGQP 84
++LG+G FG +L T + YA K + K K+R + R+I + P
Sbjct: 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEV---NHP 58
Query: 85 NVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMG 144
+V+ ++ E ++++++ GGDLF R+ + +E D L + A++ HS+G
Sbjct: 59 FIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLG 118
Query: 145 VMHRDLKPENFSFISRDDNALLKVTDFG--SALLFEEGQVYRDIVGSGFYIAPEVLRRR- 201
+++RDLKPEN I D+ +K+TDFG + E + Y G+ Y+APEV+ RR
Sbjct: 119 IIYRDLKPEN---ILLDEEGHIKLTDFGLSKESIDHEKKAY-SFCGTVEYMAPEVVNRRG 174
Query: 202 YGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPS-ISSTAKDLV 260
+ + D WS GV+++ +L+G PF + +K T IL+ ++ P +S A+ L+
Sbjct: 175 HTQSADWWSFGVLMFEMLTGSLPFQGKDRKETMTMILKAKLGM-----PQFLSPEAQSLL 229
Query: 261 RRMLTKDPKRRITAA 275
R + ++P R+ A
Sbjct: 230 RALFKRNPANRLGAG 244
|
Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylates all known RSK substrates. RSKs act as downstream effectors of mitogen-activated protein kinase (MAPK) and play key roles in mitogen-activated cell growth, differentiation, and survival. Mammals possess four RSK isoforms (RSK1-4) from distinct genes. RSK proteins are also referred to as MAP kinase-activated protein kinases (MAPKAPKs), p90-RSKs, or p90S6Ks. Length = 318 |
| >gnl|CDD|173718 cd05629, STKc_NDR_like_fungal, Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 104 bits (261), Expect = 1e-24
Identities = 84/309 (27%), Positives = 133/309 (43%), Gaps = 59/309 (19%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVE 88
+++G+G FG L + T + YA K++ K + + ++ E + L S P VV
Sbjct: 7 KVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDV-LAESDSPWVVS 65
Query: 89 FKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHR 148
+++D ++++ME GGDL +I SE + V A+ H +G +HR
Sbjct: 66 LYYSFQDAQYLYLIMEFLPGGDLMTMLIKYDTFSEDVTRFYMAECVLAIEAVHKLGFIHR 125
Query: 149 DLKPENFSFISRDDNALLKVTDFGSALLF------------------------EEGQVYR 184
D+KP+N I D +K++DFG + F
Sbjct: 126 DIKPDN---ILIDRGGHIKLSDFGLSTGFHKQHDSAYYQKLLQGKSNKNRIDNRNSVAVD 182
Query: 185 DI------------------------VGSGFYIAPEV-LRRRYGKEIDIWSAGVILYILL 219
I VG+ YIAPE+ L++ YG+E D WS G I++ L
Sbjct: 183 SINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSLGAIMFECL 242
Query: 220 SGVPPFWAETKKGTYDAILQGE--IDFDTDPWPSISSTAKDLVRRMLTKDPKR--RITAA 275
G PPF +E TY I+ + F D +S A+DL+RR++T R R A
Sbjct: 243 IGWPPFCSENSHETYRKIINWRETLYFPDD--IHLSVEAEDLIRRLITNAENRLGRGGAH 300
Query: 276 QVLEHPWLR 284
++ HP+ R
Sbjct: 301 EIKSHPFFR 309
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of Ace2p activity and cellular morphogenesis) network. CBK1 and Orb6 play similar roles in coordinating cell morphology with cell cycle progression. Ukc1 is involved in morphogenesis, pathogenicity, and pigment formation. Cot1 plays a role in polar tip extension. Length = 377 |
| >gnl|CDD|132985 cd06654, STKc_PAK1, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1 | Back alignment and domain information |
|---|
Score = 102 bits (256), Expect = 1e-24
Identities = 80/282 (28%), Positives = 143/282 (50%), Gaps = 19/282 (6%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACK--SIAKKPKMRLAEND-MIRREIQIRLYLSGQPNVV 87
+G+G G Y + +T + A + ++ ++PK L N+ ++ RE + PN+V
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRE-------NKNPNIV 80
Query: 88 EFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMH 147
+ +Y + VVME GG L D ++ + E A V R + A+ HS V+H
Sbjct: 81 NYLDSYLVGDELWVVMEYLAGGSLTD-VVTETCMDEGQIAAVCRECLQALEFLHSNQVIH 139
Query: 148 RDLKPENFSFISRDDNALLKVTDFG-SALLFEEGQVYRDIVGSGFYIAPEVLRRR-YGKE 205
RD+K +N + D + +K+TDFG A + E +VG+ +++APEV+ R+ YG +
Sbjct: 140 RDIKSDNI-LLGMDGS--VKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPK 196
Query: 206 IDIWSAGVILYILLSGVPPFWAETK-KGTYDAILQGEIDFDTDPWPSISSTAKDLVRRML 264
+DIWS G++ ++ G PP+ E + Y G + +S+ +D + R L
Sbjct: 197 VDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNP--EKLSAIFRDFLNRCL 254
Query: 265 TKDPKRRITAAQVLEHPWLRESGEASDDTSVILRMKQFRRMN 306
D ++R +A ++L+H +L+ + S T +I K+ + N
Sbjct: 255 DMDVEKRGSAKELLQHQFLKIAKPLSSLTPLIAAAKEATKNN 296
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK1 is important in the regulation of many cellular processes including cytoskeletal dynamics, cell motility, growth, and proliferation. Although PAK1 has been regarded mainly as a cytosolic protein, recent reports indicate that PAK1 also exists in significant amounts in the nucleus, where it is involved in transcription modulation and in cell cycle regulatory events. PAK1 is also involved in transformation and tumorigenesis. Its overexpression, hyperactivation and increased nuclear accumulation is correlated to breast cancer invasiveness and progression. Nuclear accumulation is also linked to tamoxifen resistance in breast cancer cells. Length = 296 |
| >gnl|CDD|173762 cd08222, STKc_Nek11, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11 | Back alignment and domain information |
|---|
Score = 101 bits (252), Expect = 3e-24
Identities = 76/268 (28%), Positives = 127/268 (47%), Gaps = 18/268 (6%)
Query: 25 YFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLS--G 82
Y + LG+G FG YL + K + + P L N+ ++ + +L LS
Sbjct: 2 YILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQL-LSKLD 60
Query: 83 QPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYN----SERDAATVLRAIVNAVN 138
P +V+F +++ + A ++ E CEG DL ++ + SE ++ V+
Sbjct: 61 HPAIVKFHASFLERDAFCIITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVH 120
Query: 139 VCHSMGVMHRDLKPENFSFISRDDNALLKVTDFG-SALLFEEGQVYRDIVGSGFYIAPEV 197
H ++HRDLK +N F+ N LLK+ DFG S LL + G+ +Y++PE
Sbjct: 121 YMHQRRILHRDLKAKNI-FLK---NNLLKIGDFGVSRLLMGSCDLATTFTGTPYYMSPEA 176
Query: 198 LRRR-YGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWP-SISST 255
L+ + Y + DIWS G ILY + F + I++G T P + S
Sbjct: 177 LKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNFLSVVLRIVEG----PTPSLPETYSRQ 232
Query: 256 AKDLVRRMLTKDPKRRITAAQVLEHPWL 283
+++ ML KDP R +AA++L +P++
Sbjct: 233 LNSIMQSMLNKDPSLRPSAAEILRNPFI 260
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M checkpoint. Nek11 may also play a role in the S-phase checkpoint as well as in DNA replication and genotoxic stress responses. Length = 260 |
| >gnl|CDD|173741 cd07843, STKc_CDC2L1, Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1 | Back alignment and domain information |
|---|
Score = 101 bits (254), Expect = 4e-24
Identities = 82/304 (26%), Positives = 122/304 (40%), Gaps = 82/304 (26%)
Query: 34 GQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMI------RREIQIRLYLSGQPNVV 87
G +GV Y + T A K + KM E + REI I L L PN+V
Sbjct: 16 GTYGVVYRARDKKTGEIVALKKL----KM---EKEKEGFPITSLREINILLKLQ-HPNIV 67
Query: 88 EFK-----STYEDETAVHVVMELCEGG--DLFDRIIAKGYNSERDAATVLRAIVNAVNVC 140
K S + +++VME E L + + K + + ++ +++ V
Sbjct: 68 TVKEVVVGSNLDK---IYMVMEYVEHDLKSLMETM--KQPFLQSEVKCLMLQLLSGVAHL 122
Query: 141 HSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEE-GQVYRDIVGSGFYIAPEVL- 198
H ++HRDLK N +R +LK+ DFG A + + Y +V + +Y APE+L
Sbjct: 123 HDNWILHRDLKTSNLLLNNR---GILKICDFGLAREYGSPLKPYTQLVVTLWYRAPELLL 179
Query: 199 -RRRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEID-----FDT------ 246
+ Y ID+WS G I LL+ P F G + EID F
Sbjct: 180 GAKEYSTAIDMWSVGCIFAELLTKKPLF-----PG------KSEIDQLNKIFKLLGTPTE 228
Query: 247 DPWP----------------------------SISSTAKDLVRRMLTKDPKRRITAAQVL 278
WP S+S DL+ R+LT DP +RI+A L
Sbjct: 229 KIWPGFSELPGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDAL 288
Query: 279 EHPW 282
+HP+
Sbjct: 289 KHPY 292
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the major isoform, associates with cyclin L and is expressed throughout the cell cycle. It is involved in RNA processing and the regulation of transcription. CDK11(p58) associates with cyclin D3 and is expressed during the G2/M phase of the cell cycle. It plays roles in spindle morphogenesis, centrosome maturation, sister chromatid cohesion, and the completion of mitosis. CDK11(p46) is formed from the larger isoforms by caspases during TNFalpha- and Fas-induced apoptosis. It functions as a downstream effector kinase in apoptotic signaling pathways and interacts with eukaryotic initiation factor 3f (eIF3f), p21-activated kinase (PAK1), and Ran-binding protein (RanBPM). Length = 293 |
| >gnl|CDD|173717 cd05628, STKc_NDR1, Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1 | Back alignment and domain information |
|---|
Score = 102 bits (255), Expect = 6e-24
Identities = 82/288 (28%), Positives = 133/288 (46%), Gaps = 42/288 (14%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVE 88
+++GRG FG L + T YA K + K + + IR E I L + VV+
Sbjct: 7 KVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDI-LVEADSLWVVK 65
Query: 89 FKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHR 148
+++D+ ++++ME GGD+ ++ K +E + + V A++ H +G +HR
Sbjct: 66 MFYSFQDKLNLYLIMEFLPGGDMMTLLMKKDTLTEEETQFYIAETVLAIDSIHQLGFIHR 125
Query: 149 DLKPENFSFISRDDNALLKVTDFGSALLFEEG---QVYRDI------------------- 186
D+KP+N S+ +K++DFG ++ + YR++
Sbjct: 126 DIKPDNLLLDSKGH---VKLSDFGLCTGLKKAHRTEFYRNLNHSLPSDFTFQNMNSKRKA 182
Query: 187 --------------VGSGFYIAPEV-LRRRYGKEIDIWSAGVILYILLSGVPPFWAETKK 231
VG+ YIAPEV ++ Y K D WS GVI+Y +L G PPF +ET +
Sbjct: 183 ETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSETPQ 242
Query: 232 GTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLE 279
TY ++ + P IS AKDL+ R + + RI A V E
Sbjct: 243 ETYKKVMNWKETLIFPPEVPISEKAKDLILRFCC-EWEHRIGAPGVEE 289
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, muscle, lung and spleen. It is not an essential protein because mice deficient of NDR1 remain viable and fertile. However, these mice develop T-cell lymphomas and appear to be hypersenstive to carcinogenic treatment. NDR1 appears to act as a tumor suppressor. NDR1 is also called STK38. Length = 363 |
| >gnl|CDD|173765 cd08225, STKc_Nek5, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5 | Back alignment and domain information |
|---|
Score = 100 bits (249), Expect = 8e-24
Identities = 75/261 (28%), Positives = 127/261 (48%), Gaps = 15/261 (5%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVE 88
+ +G G FG YL S + K I KM + E + ++E+ I L PN+V
Sbjct: 6 KKIGEGSFGKIYLAKAKSDSEHCVIKEIDLT-KMPVKEKEASKKEV-ILLAKMKHPNIVT 63
Query: 89 FKSTYEDETAVHVVMELCEGGDLFDRI-IAKGYNSERDAATVLRAIVN---AVNVCHSMG 144
F +++++ + +VME C+GGDL RI +G D +L V + H
Sbjct: 64 FFASFQENGRLFIVMEYCDGGDLMKRINRQRGVLFSED--QILSWFVQISLGLKHIHDRK 121
Query: 145 VMHRDLKPENFSFISRDDNALLKVTDFGSA-LLFEEGQVYRDIVGSGFYIAPEVLRRR-Y 202
++HRD+K +N F+S+ + + K+ DFG A L + ++ VG+ +Y++PE+ + R Y
Sbjct: 122 ILHRDIKSQNI-FLSK-NGMVAKLGDFGIARQLNDSMELAYTCVGTPYYLSPEICQNRPY 179
Query: 203 GKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRR 262
+ DIWS G +LY L + PF I QG + P+ S + L+ +
Sbjct: 180 NNKTDIWSLGCVLYELCTLKHPFEGNNLHQLVLKICQGYFAPIS---PNFSRDLRSLISQ 236
Query: 263 MLTKDPKRRITAAQVLEHPWL 283
+ P+ R + +L+ P+L
Sbjct: 237 LFKVSPRDRPSITSILKRPFL 257
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. Length = 257 |
| >gnl|CDD|132983 cd06652, STKc_MEKK2, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2 | Back alignment and domain information |
|---|
Score = 99.7 bits (248), Expect = 1e-23
Identities = 75/264 (28%), Positives = 131/264 (49%), Gaps = 18/264 (6%)
Query: 27 FGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLS-GQPN 85
G++LG+G FG YLC + T R A K + P+ ++ E +I+L +
Sbjct: 6 LGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHER 65
Query: 86 VVEFKSTYED--ETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSM 143
+V++ D E + + ME GG + D++ + G +E R I+ V+ HS
Sbjct: 66 IVQYYGCLRDPMERTLSIFMEHMPGGSIKDQLKSYGALTENVTRKYTRQILEGVSYLHSN 125
Query: 144 GVMHRDLKPENFSFISRDDNALLKVTDFGSALLFE----EGQVYRDIVGSGFYIAPEVLR 199
++HRD+K N I RD +K+ DFG++ + G + + G+ ++++PEV+
Sbjct: 126 MIVHRDIKGAN---ILRDSVGNVKLGDFGASKRLQTICLSGTGMKSVTGTPYWMSPEVIS 182
Query: 200 -RRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPW--PSISSTA 256
YG++ DIWS G + +L+ PP WAE + AI + T+P P +S
Sbjct: 183 GEGYGRKADIWSVGCTVVEMLTEKPP-WAEFE--AMAAIFKIATQ-PTNPVLPPHVSDHC 238
Query: 257 KDLVRRMLTKDPKRRITAAQVLEH 280
+D ++R+ + K R +A ++L H
Sbjct: 239 RDFLKRIFV-EAKLRPSADELLRH 261
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their respective MAPKKs MEK1/2, JNK-activating kinase 2 (JNKK2), and MKK3/6. MEKK2 plays roles in T cell receptor signaling, immune synapse formation, cytokine gene expression, as well as in EGF and FGF receptor signaling. Length = 265 |
| >gnl|CDD|173682 cd05591, STKc_nPKC_epsilon, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon | Back alignment and domain information |
|---|
Score = 100 bits (251), Expect = 2e-23
Identities = 73/266 (27%), Positives = 127/266 (47%), Gaps = 16/266 (6%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVE 88
++LG+G FG L T+ YA K + K ++ + D E +I + P +
Sbjct: 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTA 60
Query: 89 FKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHR 148
++ + + VME GGDL +I E + + A+ H GV++R
Sbjct: 61 LHCCFQTKDRLFFVMEYVNGGDLMFQIQRSRKFDEPRSRFYAAEVTLALMFLHRHGVIYR 120
Query: 149 DLKPENFSFISRDDNALLKVTDFGSALL-FEEGQVYRDIVGSGFYIAPEVLRR-RYGKEI 206
DLK +N I D K+ DFG G G+ YIAPE+L+ YG +
Sbjct: 121 DLKLDN---ILLDAEGHCKLADFGMCKEGILNGVTTTTFCGTPDYIAPEILQELEYGPSV 177
Query: 207 DIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTK 266
D W+ GV++Y +++G PPF A+ + +++IL ++ + W +S A +++ +TK
Sbjct: 178 DWWALGVLMYEMMAGQPPFEADNEDDLFESILHDDVLYPV--W--LSKEAVSILKAFMTK 233
Query: 267 DPKRRI--TAAQ-----VLEHPWLRE 285
+P +R+ A+Q + +HP+ +E
Sbjct: 234 NPNKRLGCVASQGGEDAIKQHPFFKE 259
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to neoplastic transformation depending on the cell type. It contributes to oncogenesis by inducing disordered cell growth and inhibiting cell death. It also plays a role in tumor invasion and metastasis. PKC-epsilon has also been found to confer cardioprotection against ischemia and reperfusion-mediated damage. Other cellular functions include the regulation of gene expression, cell adhesion, and cell motility. Length = 321 |
| >gnl|CDD|173707 cd05616, STKc_cPKC_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta | Back alignment and domain information |
|---|
Score = 100 bits (250), Expect = 2e-23
Identities = 77/268 (28%), Positives = 129/268 (48%), Gaps = 20/268 (7%)
Query: 27 FGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRL--AENDMIRREIQIRLYLSGQP 84
F +LG+G FG L T+ YA K + K ++ E M+ + + L LSG+P
Sbjct: 4 FLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRV---LALSGKP 60
Query: 85 N-VVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSM 143
+ + S ++ ++ VME GGDL +I G E A I + HS
Sbjct: 61 PFLTQLHSCFQTMDRLYFVMEYVNGGDLMYQIQQVGRFKEPHAVFYAAEIAIGLFFLHSK 120
Query: 144 GVMHRDLKPENFSFISRDDNALLKVTDFGSALL-FEEGQVYRDIVGSGFYIAPEVLRRR- 201
G+++RDLK +N + D +K+ DFG +G + G+ YIAPE++ +
Sbjct: 121 GIIYRDLKLDN---VMLDSEGHIKIADFGMCKENMWDGVTTKTFCGTPDYIAPEIIAYQP 177
Query: 202 YGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVR 261
YGK +D W+ GV+LY +L+G PF E + + +I++ + + S+S A + +
Sbjct: 178 YGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPK----SMSKEAVAICK 233
Query: 262 RMLTKDPKRRITAA-----QVLEHPWLR 284
++TK P +R+ + EH + R
Sbjct: 234 GLMTKHPGKRLGCGPEGERDIKEHAFFR 261
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. The PKC beta isoforms (I and II), generated by alternative splicing of a single gene, are preferentially activated by hyperglycemia-induced DAG in retinal tissues. This is implicated in diabetic microangiopathy such as ischemia, neovascularization, and abnormal vasodilator function. PKC-beta also plays an important role in VEGF signaling. In addition, glucose regulates proliferation in retinal endothelial cells via PKC-betaI. PKC-beta is also being explored as a therapeutic target in cancer. It contributes to tumor formation and is involved in the tumor host mechanisms of inflammation and angiogenesis. Length = 323 |
| >gnl|CDD|132984 cd06653, STKc_MEKK3_like_1, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 98.9 bits (246), Expect = 2e-23
Identities = 75/267 (28%), Positives = 129/267 (48%), Gaps = 24/267 (8%)
Query: 28 GRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLY-LSGQPNV 86
G++LGRG FG YLC + T R A K + P + ++ E +I+L +
Sbjct: 7 GKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRI 66
Query: 87 VEFKSTYED--ETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMG 144
V++ D E + + +E GG + D++ A G +E R I+ V+ HS
Sbjct: 67 VQYYGCLRDPEEKKLSIFVEYMPGGSIKDQLKAYGALTENVTRRYTRQILQGVSYLHSNM 126
Query: 145 VMHRDLKPENFSFISRDDNALLKVTDFGSA----LLFEEGQVYRDIVGSGFYIAPEVLR- 199
++HRD+K N I RD +K+ DFG++ + G + + G+ ++++PEV+
Sbjct: 127 IVHRDIKGAN---ILRDSAGNVKLGDFGASKRIQTICMSGTGIKSVTGTPYWMSPEVISG 183
Query: 200 RRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWP-----SISS 254
YG++ D+WS + +L+ PP WAE Y+A + T P +S
Sbjct: 184 EGYGRKADVWSVACTVVEMLTEKPP-WAE-----YEA-MAAIFKIATQPTKPMLPDGVSD 236
Query: 255 TAKDLVRRMLTKDPKRRITAAQVLEHP 281
+D ++++ ++ KRR TA +L HP
Sbjct: 237 ACRDFLKQIFVEE-KRRPTAEFLLRHP 262
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 264 |
| >gnl|CDD|173706 cd05615, STKc_cPKC_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha | Back alignment and domain information |
|---|
Score = 99.3 bits (247), Expect = 5e-23
Identities = 73/265 (27%), Positives = 123/265 (46%), Gaps = 14/265 (5%)
Query: 27 FGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNV 86
F +LG+G FG L T+ YA K + K ++ + + E ++ P +
Sbjct: 4 FLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFL 63
Query: 87 VEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVM 146
+ S ++ ++ VME GGDL I G E A I + H G++
Sbjct: 64 TQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISVGLFFLHRRGII 123
Query: 147 HRDLKPENFSFISRDDNALLKVTDFGSAL-LFEEGQVYRDIVGSGFYIAPEVLRRR-YGK 204
+RDLK +N + D +K+ DFG +G R G+ YIAPE++ + YGK
Sbjct: 124 YRDLKLDN---VMLDSEGHIKIADFGMCKEHMVDGVTTRTFCGTPDYIAPEIIAYQPYGK 180
Query: 205 EIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRML 264
+D W+ GV+LY +L+G PPF E + + +I++ + + S+S A + + ++
Sbjct: 181 SVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYPK----SLSKEAVSICKGLM 236
Query: 265 TKDPKRRITAAQ-----VLEHPWLR 284
TK P +R+ + EH + R
Sbjct: 237 TKHPSKRLGCGPEGERDIREHAFFR 261
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. PKC-alpha is expressed in many tissues and is associated with cell proliferation, apoptosis, and cell motility. It plays a role in the signaling of the growth factors PDGF, VEGF, EGF, and FGF. Abnormal levels of PKC-alpha have been detected in many transformed cell lines and several human tumors. In addition, PKC-alpha is required for HER2 dependent breast cancer invasion. Length = 323 |
| >gnl|CDD|173727 cd06613, STKc_MAP4K3_like, Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 97.8 bits (244), Expect = 5e-23
Identities = 76/268 (28%), Positives = 121/268 (45%), Gaps = 34/268 (12%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFK 90
+G G +G Y + +T A K I +P I++EI + L PN+V +
Sbjct: 11 IGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEI---IQQEISM-LKECRHPNIVAYF 66
Query: 91 STYEDETAVHVVMELCEGG---DLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMH 147
+Y + +VME C GG D++ +G SE A V R + + H G +H
Sbjct: 67 GSYLRRDKLWIVMEYCGGGSLQDIYQVT--RGPLSELQIAYVCRETLKGLAYLHETGKIH 124
Query: 148 RDLKPENFSFISRDDNALLKVTDFG-SALLFEEGQVYRDIVGSGFYIAPEVL----RRRY 202
RD+K N I ++ +K+ DFG SA L + +G+ +++APEV + Y
Sbjct: 125 RDIKGAN---ILLTEDGDVKLADFGVSAQLTATIAKRKSFIGTPYWMAPEVAAVERKGGY 181
Query: 203 GKEIDIWSAGVILYILLSGVPPFWAE---------TKKGTYDAILQGEIDFDTDPWPSIS 253
+ DIW+ G+ L PP + +K L+ D + W S
Sbjct: 182 DGKCDIWALGITAIELAELQPPMFDLHPMRALFLISKSNFPPPKLK-----DKEKW---S 233
Query: 254 STAKDLVRRMLTKDPKRRITAAQVLEHP 281
D +++ LTKDPK+R TA ++L+HP
Sbjct: 234 PVFHDFIKKCLTKDPKKRPTATKLLQHP 261
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K1, also called haematopoietic progenitor kinase 1 (HPK1), is a hematopoietic-specific STK involved in many cellular signaling cascades including MAPK, antigen receptor, apoptosis, growth factor, and cytokine signaling. It participates in the regulation of T cell receptor signaling and T cell-mediated immune responses. MAP4K2 was referred to as germinal center (GC) kinase because of its preferred location in GC B cells. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. It is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). Length = 262 |
| >gnl|CDD|132962 cd06631, STKc_YSK4, Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4 | Back alignment and domain information |
|---|
Score = 97.7 bits (243), Expect = 6e-23
Identities = 72/271 (26%), Positives = 123/271 (45%), Gaps = 25/271 (9%)
Query: 28 GRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLA---ENDMIRREIQIRLYLSGQP 84
G +LG+G +G Y C + + A K + LA E + ++ E+ + L
Sbjct: 5 GEVLGKGAYGTVY-CGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLK-HV 62
Query: 85 NVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMG 144
N+V++ T D+ + + ME GG + + G E + I++ V H+
Sbjct: 63 NIVQYLGTCLDDNTISIFMEFVPGGSISSILNRFGPLPEPVFCKYTKQILDGVAYLHNNC 122
Query: 145 VMHRDLKPENFSFISRDDNALLKVTDFGSA-------LLFEEGQVYRDIVGSGFYIAPEV 197
V+HRD+K N + N ++K+ DFG A L + + + G+ +++APEV
Sbjct: 123 VVHRDIKGNNVMLMP---NGIIKLIDFGCARRLAWVGLHGTHSNMLKSMHGTPYWMAPEV 179
Query: 198 LRRR-YGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSI---- 252
+ YG++ DIWS G ++ + +G PP A + A+ I P +
Sbjct: 180 INESGYGRKSDIWSIGCTVFEMATGKPP-LASMDR--LAAMFY--IGAHRGLMPRLPDSF 234
Query: 253 SSTAKDLVRRMLTKDPKRRITAAQVLEHPWL 283
S+ A D V LT+D R +A Q+L H +L
Sbjct: 235 SAAAIDFVTSCLTRDQHERPSALQLLRHDFL 265
|
Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Length = 265 |
| >gnl|CDD|143356 cd07851, STKc_p38, Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Score = 98.9 bits (247), Expect = 8e-23
Identities = 93/361 (25%), Positives = 150/361 (41%), Gaps = 74/361 (20%)
Query: 13 ILGKAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIR- 71
L K +V Y +G G +G C + K ++A + R
Sbjct: 5 ELNKTVWEVPDRYQNLSPVGSGAYGQ-------------VCSAFDTKTGRKVAIKKLSRP 51
Query: 72 -----------REIQIRLYLSGQPNVVEF------KSTYEDETAVHVVMELCEGGDLFDR 114
RE+++ L NV+ S+ ED V++V L G DL +
Sbjct: 52 FQSAIHAKRTYRELRL-LKHMDHENVIGLLDVFTPASSLEDFQDVYLVTHLM-GADL-NN 108
Query: 115 IIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSA 174
I+ S+ ++ I+ + HS G++HRDLKP N I+ +++ LK+ DFG A
Sbjct: 109 IVKCQKLSDDHIQFLVYQILRGLKYIHSAGIIHRDLKPSN---IAVNEDCELKILDFGLA 165
Query: 175 LLFEEGQVYRDIVGSGFYIAPEVL--RRRYGKEIDIWSAGVILYILLSGVPPF-----WA 227
++ V + +Y APE++ Y + +DIWS G I+ LL+G F
Sbjct: 166 RHTDDEMT--GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHID 223
Query: 228 ETKK-----GTYDAILQGEI------------------DFDTDPWPSISSTAKDLVRRML 264
+ K+ GT D L +I DF + + + A DL+ +ML
Sbjct: 224 QLKRIMNLVGTPDEELLQKISSESARNYIQSLPQMPKKDF-KEVFSGANPLAIDLLEKML 282
Query: 265 TKDPKRRITAAQVLEHPWLRESGEASDDTSVILRMKQFRRMN----KLKKLTIKVIVEYL 320
DP +RITAA+ L HP+L E + D+ + F + + K+L K I+ +
Sbjct: 283 VLDPDKRITAAEALAHPYLAEYHDPEDEPVAPPYDQSFESRDLTVDEWKELVYKEIMNFK 342
Query: 321 P 321
P
Sbjct: 343 P 343
|
Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. p38 substrates include other protein kinases and factors that regulate transcription, nuclear export, mRNA stability and translation. p38 kinases are drug targets for the inflammatory diseases psoriasis, rheumatoid arthritis, and chronic pulmonary disease. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta, which show varying substrate specificity and expression patterns. p38alpha and p38beta are ubiquitously expressed, p38gamma is predominantly found in skeletal muscle, and p38delta is found in the heart, lung, testis, pancreas, and small intestine. Length = 343 |
| >gnl|CDD|173714 cd05625, STKc_LATS1, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1 | Back alignment and domain information |
|---|
Score = 99.3 bits (247), Expect = 9e-23
Identities = 88/315 (27%), Positives = 136/315 (43%), Gaps = 57/315 (18%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVE 88
+ LG G FG L + T YA K++ KK + + ++ E I L + VV
Sbjct: 7 KTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDI-LAEADNEWVVR 65
Query: 89 FKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHR 148
+++D+ ++ VM+ GGD+ +I G E A + + AV H MG +HR
Sbjct: 66 LYYSFQDKDNLYFVMDYIPGGDMMSLLIRMGIFPEDLARFYIAELTCAVESVHKMGFIHR 125
Query: 149 DLKPENFSFISRDDNALLKVTDFG---------SALLFEEGQVYR--------------- 184
D+KP+N I RD + +K+TDFG + ++ G R
Sbjct: 126 DIKPDNI-LIDRDGH--IKLTDFGLCTGFRWTHDSKYYQSGDHVRQDSMDFSNEWGDPAN 182
Query: 185 ------------------------DIVGSGFYIAPEVLRRR-YGKEIDIWSAGVILYILL 219
+VG+ YIAPEVL R Y + D WS GVILY +L
Sbjct: 183 CRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEML 242
Query: 220 SGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRI---TAAQ 276
G PPF A+T T ++ + P +S A DL+ + L + P+ R+ A +
Sbjct: 243 VGQPPFLAQTPLETQMKVINWQTSLHIPPQAKLSPEASDLIIK-LCRGPEDRLGKNGADE 301
Query: 277 VLEHPWLRESGEASD 291
+ HP+ + +SD
Sbjct: 302 IKAHPFFKTIDFSSD 316
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype and poor prognosis. LATS1 induces G2 arrest and promotes cytokinesis. It may be a component of the mitotic exit network in higher eukaryotes. Length = 382 |
| >gnl|CDD|215036 PLN00034, PLN00034, mitogen-activated protein kinase kinase; Provisional | Back alignment and domain information |
|---|
Score = 98.7 bits (246), Expect = 1e-22
Identities = 77/269 (28%), Positives = 118/269 (43%), Gaps = 29/269 (10%)
Query: 28 GRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIR----REIQIRLYLSGQ 83
+G G G Y T R YA K I D +R REI+I L
Sbjct: 79 VNRIGSGAGGTVYKVIHRPTGRLYALKVIYGN------HEDTVRRQICREIEI-LRDVNH 131
Query: 84 PNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSM 143
PNVV+ ++ + V++E +GG L IA E+ A V R I++ + H
Sbjct: 132 PNVVKCHDMFDHNGEIQVLLEFMDGGSLEGTHIAD----EQFLADVARQILSGIAYLHRR 187
Query: 144 GVMHRDLKPENFSFISRDDNALLKVTDFG-SALLFEEGQVYRDIVGSGFYIAPEVLRR-- 200
++HRD+KP N S + +K+ DFG S +L + VG+ Y++PE +
Sbjct: 188 HIVHRDIKPSNLLINSAKN---VKIADFGVSRILAQTMDPCNSSVGTIAYMSPERINTDL 244
Query: 201 ---RY-GKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWP--SISS 254
Y G DIWS GV + G PF ++G + A L I P + S
Sbjct: 245 NHGAYDGYAGDIWSLGVSILEFYLGRFPF-GVGRQGDW-ASLMCAICMSQPPEAPATASR 302
Query: 255 TAKDLVRRMLTKDPKRRITAAQVLEHPWL 283
+ + L ++P +R +A Q+L+HP++
Sbjct: 303 EFRHFISCCLQREPAKRWSAMQLLQHPFI 331
|
Length = 353 |
| >gnl|CDD|173698 cd05607, STKc_GRK7, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7 | Back alignment and domain information |
|---|
Score = 97.3 bits (242), Expect = 1e-22
Identities = 72/262 (27%), Positives = 125/262 (47%), Gaps = 22/262 (8%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFK 90
LG+G FG +T + YACK + KK + + M E +I L P +V
Sbjct: 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEI-LEKVNSPFIVNLA 59
Query: 91 STYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVC------HSMG 144
+E +T + +VM L GGDL I YN + R I + + HSM
Sbjct: 60 YAFESKTHLCLVMSLMNGGDLKYHI----YNVGERGLEMERVIHYSAQITCGILHLHSMD 115
Query: 145 VMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLRRR-YG 203
+++RD+KPEN + DD +++D G A+ ++G+ G+ Y+APE+L+ Y
Sbjct: 116 IVYRDMKPEN---VLLDDQGNCRLSDLGLAVELKDGKTITQRAGTNGYMAPEILKEEPYS 172
Query: 204 KEIDIWSAGVILYILLSGVPPFWAETKKGTYDAI----LQGEIDFDTDPWPSISSTAKDL 259
+D ++ G +Y +++G PF +K + + L+ E+ F+ + + +KD+
Sbjct: 173 YPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEELKRRTLEDEVKFEHQ---NFTEESKDI 229
Query: 260 VRRMLTKDPKRRITAAQVLEHP 281
R L K P+ R+ + + + P
Sbjct: 230 CRLFLAKKPEDRLGSREKNDDP 251
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual group of GRKs. It is primarily found in the retina and plays a role in the regulation of opsin light receptors. GRK7 is located in retinal cone outer segments and plays an important role in regulating photoresponse of the cones. Length = 277 |
| >gnl|CDD|143361 cd07856, STKc_Sty1_Hog1, Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1 | Back alignment and domain information |
|---|
Score = 98.0 bits (244), Expect = 2e-22
Identities = 88/313 (28%), Positives = 144/313 (46%), Gaps = 46/313 (14%)
Query: 13 ILGKAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRR 72
I G +E + Y + +G G FG+ + T + A K I K P R
Sbjct: 1 IFGTVFE-ITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMK-PFSTPVLAKRTYR 58
Query: 73 EIQIRLYLSGQPNVVE----FKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAAT 128
E+++ +L + N++ F S ED ++ V EL G DL R++ ++
Sbjct: 59 ELKLLKHLRHE-NIISLSDIFISPLED---IYFVTEL-LGTDL-HRLLTSRPLEKQFIQY 112
Query: 129 VLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVG 188
L I+ + HS GV+HRDLKP N I ++N LK+ DFG A + ++ Q+ V
Sbjct: 113 FLYQILRGLKYVHSAGVVHRDLKPSN---ILINENCDLKICDFGLARI-QDPQM-TGYVS 167
Query: 189 SGFYIAPEVLR--RRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAIL-------- 238
+ +Y APE++ ++Y E+DIWSAG I +L G P F + + I
Sbjct: 168 TRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPD 227
Query: 239 --------QGEIDF-------DTDP----WPSISSTAKDLVRRMLTKDPKRRITAAQVLE 279
+ + F + P + + +A DL+ +ML DP++RI+AA+ L
Sbjct: 228 DVINTICSENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALA 287
Query: 280 HPWLRESGEASDD 292
HP+L + +D+
Sbjct: 288 HPYLAPYHDPTDE 300
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and UV radiation. Sty1 is regulated by the MAP2K Wis1, which is activated by the MAP3Ks Wis4 and Win1, which receive signals of the stress condition from membrane-spanning histidine kinases Mak1-3. Activated Sty1 stabilizes the Atf1 transcription factor and induces transcription of Atf1-dependent genes of the core environmetal stress response (CESR). Hog1 is the key element in the high osmolarity glycerol (HOG) pathway and is activated upon hyperosmotic stress. Activated Hog1 accumulates in the nucleus and regulates stress-induced transcription. The HOG pathway is mediated by two transmembrane osmosensors, Sln1 and Sho1. Length = 328 |
| >gnl|CDD|173763 cd08223, STKc_Nek4, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4 | Back alignment and domain information |
|---|
Score = 96.2 bits (239), Expect = 2e-22
Identities = 69/265 (26%), Positives = 131/265 (49%), Gaps = 15/265 (5%)
Query: 25 YFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQP 84
Y F R++G+G +G L + + Y K + + R E +E Q+ L P
Sbjct: 2 YCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASR-RERKAAEQEAQLLSQLK-HP 59
Query: 85 NVVEFKSTYEDETA-VHVVMELCEGGDLFDRIIAKGYN--SERDAATVLRAIVNAVNVCH 141
N+V ++ ++E E +++VM CEGGDL+ ++ + E I A+ H
Sbjct: 60 NIVAYRESWEGEDGLLYIVMGFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLH 119
Query: 142 SMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFE-EGQVYRDIVGSGFYIAPEVLRR 200
++HRDLK +N F++R + ++KV D G A + E + + ++G+ +Y++PE+
Sbjct: 120 EKHILHRDLKTQNV-FLTRTN--IIKVGDLGIARVLENQCDMASTLIGTPYYMSPELFSN 176
Query: 201 R-YGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPS-ISSTAKD 258
+ Y + D+W+ G +Y + + F A+ I++G++ P P S +
Sbjct: 177 KPYNYKSDVWALGCCVYEMATLKHAFNAKDMNSLVYRIIEGKLP----PMPKDYSPELGE 232
Query: 259 LVRRMLTKDPKRRITAAQVLEHPWL 283
L+ ML+K P++R + +L P++
Sbjct: 233 LIATMLSKRPEKRPSVKSILRQPYI 257
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. Length = 257 |
| >gnl|CDD|132938 cd06607, STKc_TAO, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins | Back alignment and domain information |
|---|
Score = 97.2 bits (242), Expect = 2e-22
Identities = 76/296 (25%), Positives = 129/296 (43%), Gaps = 28/296 (9%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVE 88
R +G G FG Y + TN A K ++ K + I +E++ L PN +E
Sbjct: 21 REIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRF-LQQLRHPNTIE 79
Query: 89 FKSTYEDETAVHVVMELCEG--GDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVM 146
+K Y E +VME C G D+ + + K E + A + + + HS +
Sbjct: 80 YKGCYLREHTAWLVMEYCLGSASDILE--VHKKPLQEVEIAAICHGALQGLAYLHSHERI 137
Query: 147 HRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVL----RRRY 202
HRD+K N I + +K+ DFGSA L + VG+ +++APEV+ +Y
Sbjct: 138 HRDIKAGN---ILLTEPGTVKLADFGSASLVSPANSF---VGTPYWMAPEVILAMDEGQY 191
Query: 203 GKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEI-DFDTDPWPSISSTAKDLVR 261
++D+WS G+ L PP + I Q + ++ W S ++ V
Sbjct: 192 DGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNDSPTLSSNDW---SDYFRNFVD 248
Query: 262 RMLTKDPKRRITAAQVLEHPWLRESGEASDDTSVILRMK---------QFRRMNKL 308
L K P+ R ++ ++L+H ++ + +I R K Q+R+M K+
Sbjct: 249 SCLQKIPQDRPSSEELLKHRFVLRERPPTVIIDLIQRTKDAVRELDNLQYRKMKKI 304
|
Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily members, named TAO1, TAO2, and TAO3. Length = 307 |
| >gnl|CDD|132972 cd06641, STKc_MST3, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3 | Back alignment and domain information |
|---|
Score = 95.5 bits (237), Expect = 4e-22
Identities = 82/285 (28%), Positives = 145/285 (50%), Gaps = 31/285 (10%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDM--IRREIQIRLYLSGQPNVVE 88
+G+G FG + +N T + A K I + AE+++ I++EI + L P V +
Sbjct: 12 IGKGSFGEVFKGIDNRTQKVVAIKII----DLEEAEDEIEDIQQEITV-LSQCDSPYVTK 66
Query: 89 FKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHR 148
+ +Y +T + ++ME GG D ++ G E AT+LR I+ ++ HS +HR
Sbjct: 67 YYGSYLKDTKLWIIMEYLGGGSALD-LLEPGPLDETQIATILREILKGLDYLHSEKKIHR 125
Query: 149 DLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRD-IVGSGFYIAPEVLRRR-YGKEI 206
D+K N + ++ +K+ DFG A + Q+ R+ VG+ F++APEV+++ Y +
Sbjct: 126 DIKAAN---VLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKA 182
Query: 207 DIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDF---DTDPWPSI----SSTAKDL 259
DIWS G+ L G PP + + ++ F +P P++ S K+
Sbjct: 183 DIWSLGITAIELAKGEPP---------HSELHPMKVLFLIPKNNP-PTLEGNYSKPLKEF 232
Query: 260 VRRMLTKDPKRRITAAQVLEHPW-LRESGEASDDTSVILRMKQFR 303
V L K+P R TA ++L+H + +R + + S T +I R K+++
Sbjct: 233 VEACLNKEPSFRPTAKELLKHKFIVRFAKKTSYLTELIDRYKRWK 277
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and intrauterine growth retardation. Length = 277 |
| >gnl|CDD|173697 cd05606, STKc_beta_ARK, Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase | Back alignment and domain information |
|---|
Score = 95.4 bits (237), Expect = 5e-22
Identities = 78/266 (29%), Positives = 128/266 (48%), Gaps = 16/266 (6%)
Query: 30 MLGRGQFGVSYLCTENSTNRPYACKSIAKKP-KMRLAENDMIRREIQIRLYLSGQ-PNVV 87
++GRG FG Y C + T + YA K + KK KM+ E + I + L +G P +V
Sbjct: 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIV 60
Query: 88 EFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMH 147
+ + +++L GGDL + G SE + I+ + H+ V++
Sbjct: 61 CMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEAEMRFYAAEIILGLEHMHNRFVVY 120
Query: 148 RDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLRR--RYGKE 205
RDLKP N I D++ ++++D G A F + + + VG+ Y+APEVL++ Y
Sbjct: 121 RDLKPAN---ILLDEHGHVRISDLGLACDFSKKKPHAS-VGTHGYMAPEVLQKGVAYDSS 176
Query: 206 IDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWP-SISSTAKDLVRRML 264
D +S G +L+ LL G PF K ++ I + + + P S S + L+ +L
Sbjct: 177 ADWFSLGCMLFKLLRGHSPFRQHKTKDKHE-IDRMTLTMAVE-LPDSFSPELRSLLEGLL 234
Query: 265 TKDPKRRI-----TAAQVLEHPWLRE 285
+D RR+ A +V EHP+ R
Sbjct: 235 QRDVNRRLGCLGRGAQEVKEHPFFRS 260
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is composed of GRK2, GRK3, and similar proteins. GRK2 and GRK3 are both widely expressed in many tissues, although GRK2 is present at higher levels. They contain an N-terminal RGS homology (RH) domain, a central catalytic domain, and C-terminal pleckstrin homology (PH) domain that mediates PIP2 and G protein betagamma-subunit translocation to the membrane. GRK2 (also called beta-ARK or beta-ARK1) is important in regulating several cardiac receptor responses. It plays a role in cardiac development and in hypertension. Deletion of GRK2 in mice results in embryonic lethality, caused by hypoplasia of the ventricular myocardium. GRK2 also plays important roles in the liver (as a regulator of portal blood pressure), in immune cells, and in the nervous system. Altered GRK2 expression has been reported in several disorders including major depression, schizophrenia, bipolar disorder, and Parkinsonism. Length = 278 |
| >gnl|CDD|88519 cd05618, STKc_aPKC_iota, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota | Back alignment and domain information |
|---|
Score = 96.3 bits (239), Expect = 6e-22
Identities = 75/269 (27%), Positives = 122/269 (45%), Gaps = 16/269 (5%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVE 88
R++GRG + L T R YA K + K+ + D ++ E + S P +V
Sbjct: 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVG 60
Query: 89 FKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHR 148
S ++ E+ + V+E GGDL + + E A I A+N H G+++R
Sbjct: 61 LHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYR 120
Query: 149 DLKPENFSFISRDDNALLKVTDFGSALL-FEEGQVYRDIVGSGFYIAPEVLR-RRYGKEI 206
DLK +N + D +K+TD+G G G+ YIAPE+LR YG +
Sbjct: 121 DLKLDN---VLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSV 177
Query: 207 DIWSAGVILYILLSGVPPF-----WAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVR 261
D W+ GV+++ +++G PF + T D + Q ++ S+S A +++
Sbjct: 178 DWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRSLSVKAASVLK 237
Query: 262 RMLTKDPKRRITA------AQVLEHPWLR 284
L KDPK R+ A + HP+ R
Sbjct: 238 SFLNKDPKERLGCHPQTGFADIQGHPFFR 266
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target of tumor-specific gene amplification in many human cancers, and has been identified as a human oncogene. In addition to its role in transformed growth, PKC-iota also promotes invasion, chemoresistance, and tumor cell survival. Expression profiling of PKC-iota is a prognostic marker of poor clinical outcome in several human cancers. PKC-iota also plays a role in establishing cell polarity, and has critical embryonic functions. Length = 329 |
| >gnl|CDD|132973 cd06642, STKc_STK25-YSK1, Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1 | Back alignment and domain information |
|---|
Score = 94.7 bits (235), Expect = 8e-22
Identities = 83/284 (29%), Positives = 139/284 (48%), Gaps = 29/284 (10%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDM--IRREIQIRLYLSGQPNVVE 88
+G+G FG Y +N T A K I + AE+++ I++EI + L P +
Sbjct: 12 IGKGSFGEVYKGIDNRTKEVVAIKII----DLEEAEDEIEDIQQEITV-LSQCDSPYITR 66
Query: 89 FKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHR 148
+ +Y T + ++ME GG D ++ G E AT+LR I+ ++ HS +HR
Sbjct: 67 YYGSYLKGTKLWIIMEYLGGGSALD-LLKPGPLEETYIATILREILKGLDYLHSERKIHR 125
Query: 149 DLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRD-IVGSGFYIAPEVLRRR-YGKEI 206
D+K N + D +K+ DFG A + Q+ R+ VG+ F++APEV+++ Y +
Sbjct: 126 DIKAANVLLSEQGD---VKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDFKA 182
Query: 207 DIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDF--DTDPWPSI----SSTAKDLV 260
DIWS G+ L G PP + + F + P++ S K+ V
Sbjct: 183 DIWSLGITAIELAKGEPP---------NSDLHPMRVLFLIPKNSPPTLEGQYSKPFKEFV 233
Query: 261 RRMLTKDPKRRITAAQVLEHPWL-RESGEASDDTSVILRMKQFR 303
L KDP+ R TA ++L+H ++ R + + S T +I R K+++
Sbjct: 234 EACLNKDPRFRPTAKELLKHKFITRYTKKTSFLTELIDRYKRWK 277
|
Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 is a candidate gene responsible for pseudopseudohypoparathyroidism (PPHP), a disease that shares features with the Albright hereditary osteodystrophy (AHO) phenotype. Length = 277 |
| >gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain | Back alignment and domain information |
|---|
Score = 94.1 bits (235), Expect = 9e-22
Identities = 65/266 (24%), Positives = 110/266 (41%), Gaps = 24/266 (9%)
Query: 26 FFGRMLGRGQFGVSYLCT----ENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLS 81
G+ LG G FG Y A K++ K+ + RE +I L
Sbjct: 2 TLGKKLGEGAFGEVYKGKLKGKGGKKKVEVAVKTL-KEDASEQQIEEF-LREARIMRKLD 59
Query: 82 GQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYN-SERDAATVLRAIVNAVNVC 140
PNVV+ +E +++VME EGGDL + S D + I +
Sbjct: 60 -HPNVVKLLGVCTEEEPLYIVMEYMEGGDLLSYLRKNRPKLSLSDLLSFALQIARGMEYL 118
Query: 141 HSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSG--FYIAPEVL 198
S +HRDL N + + K++DFG + + YR G ++APE L
Sbjct: 119 ESKNFIHRDLAARNC-LVGENLVV--KISDFGLSRDLYDDDYYRKRGGKLPIRWMAPESL 175
Query: 199 R-RRYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTA 256
+ ++ + D+WS GV+L+ + + G P+ + + + + G P +
Sbjct: 176 KEGKFTSKSDVWSFGVLLWEIFTLGEQPYPGMSNEEVLEYLKNGYR------LPQPPNCP 229
Query: 257 KDLVRRMLT---KDPKRRITAAQVLE 279
+L ML +DP+ R T ++++E
Sbjct: 230 PELYDLMLQCWAEDPEDRPTFSELVE 255
|
Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257 |
| >gnl|CDD|173715 cd05626, STKc_LATS2, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2 | Back alignment and domain information |
|---|
Score = 96.6 bits (240), Expect = 9e-22
Identities = 85/314 (27%), Positives = 135/314 (42%), Gaps = 55/314 (17%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVE 88
+ LG G FG L + T+ YA K++ KK + + ++ E I L + VV+
Sbjct: 7 KTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDI-LAEADNEWVVK 65
Query: 89 FKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHR 148
+++D+ ++ VM+ GGD+ +I E A + + A+ H MG +HR
Sbjct: 66 LYYSFQDKDNLYFVMDYIPGGDMMSLLIRMEVFPEVLARFYIAELTLAIESVHKMGFIHR 125
Query: 149 DLKPENFSFISRDDNALLKVTDFG---------SALLFEEGQVYR--------------- 184
D+KP+N I D + +K+TDFG ++ +++G R
Sbjct: 126 DIKPDN---ILIDLDGHIKLTDFGLCTGFRWTHNSKYYQKGSHIRQDSMEPSDLWDDVSN 182
Query: 185 ------------------------DIVGSGFYIAPEVLRRR-YGKEIDIWSAGVILYILL 219
+VG+ YIAPEVL R+ Y + D WS GVIL+ +L
Sbjct: 183 CRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGVILFEML 242
Query: 220 SGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKDPKR--RITAAQV 277
G PPF A T T ++ E P +S A DL+ ++ +R R A +
Sbjct: 243 VGQPPFLAPTPTETQLKVINWENTLHIPPQVKLSPEAVDLITKLCCSAEERLGRNGADDI 302
Query: 278 LEHPWLRESGEASD 291
HP+ E +SD
Sbjct: 303 KAHPFFSEVDFSSD 316
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with poor prognosis in acute lymphoblastic leukemia and breast cancer. Length = 381 |
| >gnl|CDD|173744 cd07847, STKc_CDKL1_4, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4 | Back alignment and domain information |
|---|
Score = 94.0 bits (234), Expect = 2e-21
Identities = 80/289 (27%), Positives = 130/289 (44%), Gaps = 49/289 (16%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIR----LYLSGQPNV 86
+G G +GV + C T + A K K +E+D + ++I +R L PN+
Sbjct: 9 IGEGSYGVVFKCRNRETGQIVAIK------KFVESEDDPVIKKIALREIRMLKQLKHPNL 62
Query: 87 VEFKSTYEDETAVHVVMELCEGGDL--FDRIIAKGYNSERDAATVLRAIVNAVNVCHSMG 144
V + + +H+V E C+ L ++ +G E ++ + AVN CH
Sbjct: 63 VNLIEVFRRKRKLHLVFEYCDHTVLNELEKN-PRGVP-EHLIKKIIWQTLQAVNFCHKHN 120
Query: 145 VMHRDLKPENFSFISRDDNALLKVTDFGSA-LLFEEGQVYRDIVGSGFYIAPEVL--RRR 201
+HRD+KPEN I++ +K+ DFG A +L G Y D V + +Y APE+L +
Sbjct: 121 CIHRDVKPENI-LITKQG--QIKLCDFGFARILTGPGDDYTDYVATRWYRAPELLVGDTQ 177
Query: 202 YGKEIDIWSAGVILYILLSGVPPFWA---------ETKKGTYDAILQGEIDFDT------ 246
YG +D+W+ G + LL+G P W +K D I + + F T
Sbjct: 178 YGPPVDVWAIGCVFAELLTGQ-PLWPGKSDVDQLYLIRKTLGDLIPRHQQIFSTNQFFKG 236
Query: 247 -------------DPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPW 282
+P+ISS A ++ L DP R++ ++LEHP+
Sbjct: 237 LSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLEHPY 285
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The function of CDKL4 is unknown. Length = 286 |
| >gnl|CDD|173742 cd07845, STKc_CDK10, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10 | Back alignment and domain information |
|---|
Score = 94.4 bits (235), Expect = 2e-21
Identities = 79/296 (26%), Positives = 124/296 (41%), Gaps = 54/296 (18%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRL-AENDMIR----REIQIRLYLSGQPN 85
+G G +G+ Y + ++ A K K+R+ E D I REI + L L PN
Sbjct: 15 IGEGTYGIVYRARDTTSGEIVALK------KVRMDNERDGIPISSLREITLLLNLR-HPN 67
Query: 86 VVEFKSTYEDE--TAVHVVMELCEG--GDLFDRIIAKGYNSERDAATVLRAIVNAVNVCH 141
+VE K + ++ +VME CE L D + SE ++ ++ + H
Sbjct: 68 IVELKEVVVGKHLDSIFLVMEYCEQDLASLLDNMPTP--FSESQVKCLMLQLLRGLQYLH 125
Query: 142 SMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDI---VGSGFYIAPEVL 198
++HRDLK N D LK+ DFG A + G + + V + +Y APE+L
Sbjct: 126 ENFIIHRDLKVSNLLL---TDKGCLKIADFGLARTY--GLPAKPMTPKVVTLWYRAPELL 180
Query: 199 --RRRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQ----------------- 239
Y ID+W+ G IL LL+ P +++ D I+Q
Sbjct: 181 LGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPNESIWPGFSDLP 240
Query: 240 --GEIDFDTDPW-------PSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRES 286
G+ P+ P +S L+ +L DPK+R TA + LE + +E
Sbjct: 241 LVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALESSYFKEK 296
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing increases the transcription of c-RAF and the activation of the p42/p44 MAPK pathway, which leads to antiestrogen resistance. Patients who express low levels of CDK10 relapse early on tamoxifen. Length = 309 |
| >gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Score = 93.0 bits (232), Expect = 2e-21
Identities = 64/267 (23%), Positives = 113/267 (42%), Gaps = 25/267 (9%)
Query: 26 FFGRMLGRGQFGVSYLCT----ENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLS 81
G+ LG G FG Y T + A K++ K+ + + RE +I L
Sbjct: 2 TLGKKLGEGAFGEVYKGTLKGKGDGKEVEVAVKTL-KEDASE-QQIEEFLREARIMRKLD 59
Query: 82 GQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYN--SERDAATVLRAIVNAVNV 139
PN+V+ +E + +VME GGDL D + S D + I +
Sbjct: 60 -HPNIVKLLGVCTEEEPLMIVMEYMPGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEY 118
Query: 140 CHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSG--FYIAPEV 197
S +HRDL N + + K++DFG + + Y+ G ++APE
Sbjct: 119 LESKNFIHRDLAARNC-LVGENLVV--KISDFGLSRDLYDDDYYKVKGGKLPIRWMAPES 175
Query: 198 LR-RRYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQGEIDFDTDPWPSISST 255
L+ ++ + D+WS GV+L+ + + G P+ + + + +G P +
Sbjct: 176 LKEGKFTSKSDVWSFGVLLWEIFTLGEEPYPGMSNAEVLEYLKKGYRL------PKPPNC 229
Query: 256 AKDLVRRMLT---KDPKRRITAAQVLE 279
+L + ML +DP+ R T ++++E
Sbjct: 230 PPELYKLMLQCWAEDPEDRPTFSELVE 256
|
Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258 |
| >gnl|CDD|173699 cd05608, STKc_GRK1, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1 | Back alignment and domain information |
|---|
Score = 93.4 bits (232), Expect = 2e-21
Identities = 74/273 (27%), Positives = 131/273 (47%), Gaps = 29/273 (10%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKK--PKMRLAENDMIRREIQIRLYLSGQPNVVE 88
LG+G FG C +T + YACK + KK K + E M+ + I +++ +V
Sbjct: 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVH---SRFIVS 57
Query: 89 FKSTYEDETAVHVVMELCEGGDLFDRIIAKGYN--------SERDAATVLRAIVNAVNVC 140
++ +T + +VM + GGDL I YN E A I++ +
Sbjct: 58 LAYAFQTKTDLCLVMTIMNGGDLRYHI----YNVDEENPGFPEPRACFYTAQIISGLEHL 113
Query: 141 HSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQV-YRDIVGSGFYIAPEVLR 199
H +++RDLKPEN + D++ ++++D G A+ ++GQ + G+ ++APE+L+
Sbjct: 114 HQRRIIYRDLKPEN---VLLDNDGNVRISDLGLAVELKDGQSKTKGYAGTPGFMAPELLQ 170
Query: 200 -RRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWP-SISSTAK 257
Y +D ++ GV LY +++ PF A +K + L+ I D+ +P S +K
Sbjct: 171 GEEYDFSVDYFALGVTLYEMIAARGPFRARGEK-VENKELKQRILNDSVTYPDKFSPASK 229
Query: 258 DLVRRMLTKDPKRRI-----TAAQVLEHPWLRE 285
+L KDP++R+ + HP R+
Sbjct: 230 SFCEALLAKDPEKRLGFRDGNCDGLRTHPLFRD 262
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual group of GRKs and is expressed in retinal cells. It phosphorylates rhodopsin in rod cells, which leads to termination of the phototransduction cascade. Mutations in GRK1 are associated to a recessively inherited form of stationary nightblindness called Oguchi disease. Length = 280 |
| >gnl|CDD|173752 cd07861, STKc_CDK1_euk, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like | Back alignment and domain information |
|---|
Score = 93.6 bits (233), Expect = 2e-21
Identities = 79/290 (27%), Positives = 121/290 (41%), Gaps = 49/290 (16%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAEND-----MIRREIQIRLYLSGQPN 85
+G G +GV Y T + A K K+RL + REI + L PN
Sbjct: 8 IGEGTYGVVYKGRNKKTGQIVAMK------KIRLESEEEGVPSTAIREISLLKELQ-HPN 60
Query: 86 VVEFKSTYEDETAVHVVMEL--CEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSM 143
+V + E+ ++++ E + D + Y + L I+ + CHS
Sbjct: 61 IVCLQDVLMQESRLYLIFEFLSMDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSR 120
Query: 144 GVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEG---QVYRDIVGSGFYIAPEVL-- 198
V+HRDLKP+N D+ ++K+ DFG A F G +VY V + +Y APEVL
Sbjct: 121 RVLHRDLKPQNLLI---DNKGVIKLADFGLARAF--GIPVRVYTHEVVTLWYRAPEVLLG 175
Query: 199 RRRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISS---- 254
RY +DIWS G I + + P F +++ I + D WP ++S
Sbjct: 176 SPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGVTSLPDY 235
Query: 255 ---------------------TAKDLVRRMLTKDPKRRITAAQVLEHPWL 283
DL+ +ML DP +RI+A + L HP+
Sbjct: 236 KNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALNHPYF 285
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression. CDK1/cyclin A2 has also been implicated as an important regulator of S phase events. The CDK1/cyclin B complex is critical for G2 to M phase transition. It induces mitosis by activating nuclear enzymes that regulate chromatin condensation, nuclear membrane degradation, mitosis-specific microtubule and cytoskeletal reorganization. CDK1 also associates with cyclin E and plays a role in the entry into S phase. CDK1 transcription is stable throughout the cell cycle but is modulated in some pathological conditions. It may play a role in regulating apoptosis under these conditions. In breast cancer cells, HER2 can mediate apoptosis by inactivating CDK1. Activation of CDK1 may contribute to HIV-1 induced apoptosis and neuronal apoptosis in neurodegenerative diseases. Length = 285 |
| >gnl|CDD|173710 cd05620, STKc_nPKC_delta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta | Back alignment and domain information |
|---|
Score = 94.2 bits (234), Expect = 2e-21
Identities = 77/266 (28%), Positives = 130/266 (48%), Gaps = 24/266 (9%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIR-LYLSGQ-PNV 86
++LG+G FG L +A K++ K + L ++D+ ++ R L L+ + P +
Sbjct: 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKD--VVLIDDDVECTMVEKRVLALAWENPFL 58
Query: 87 VEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVM 146
T++ + + VME GGDL I KG A IV + HS G++
Sbjct: 59 THLYCTFQTKEHLFFVMEFLNGGDLMFHIQDKGRFDLYRATFYAAEIVCGLQFLHSKGII 118
Query: 147 HRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGF-----YIAPEVLR-R 200
+RDLK +N + D + +K+ DFG + V+ D S F YIAPE+L+
Sbjct: 119 YRDLKLDN---VMLDRDGHIKIADFGMC----KENVFGDNRASTFCGTPDYIAPEILQGL 171
Query: 201 RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPS-ISSTAKDL 259
+Y +D WS GV+LY +L G PF + + +++I DT +P I+ +KD+
Sbjct: 172 KYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDELFESIRV-----DTPHYPRWITKESKDI 226
Query: 260 VRRMLTKDPKRRI-TAAQVLEHPWLR 284
+ ++ +DP RR+ + HP+ +
Sbjct: 227 LEKLFERDPTRRLGVVGNIRGHPFFK 252
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. It slows down cell proliferation, inducing cell cycle arrest and enhancing cell differentiation. PKC-delta is also involved in the regulation of transcription as well as immune and inflammatory responses. It plays a central role in the genotoxic stress response that leads to DNA damaged-induced apoptosis. Length = 316 |
| >gnl|CDD|173738 cd07835, STKc_CDK1_like, Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 93.1 bits (232), Expect = 3e-21
Identities = 86/310 (27%), Positives = 124/310 (40%), Gaps = 90/310 (29%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAEND------MIRREIQIRLYLSGQP 84
+G G +GV Y + T A K K+RL D IR EI + L+ P
Sbjct: 7 IGEGTYGVVYKARDKLTGEIVALK------KIRLETEDEGVPSTAIR-EISLLKELN-HP 58
Query: 85 NVVEFKSTYEDETAVHVVMELCE----------GGDLFDRIIAKGYNSERDAATVLRAIV 134
N+V E +++V E + D + K Y L ++
Sbjct: 59 NIVRLLDVVHSENKLYLVFEFLDLDLKKYMDSSPLTGLDPPLIKSY---------LYQLL 109
Query: 135 NAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEG---QVYRDIVGSGF 191
+ CHS V+HRDLKP+N I R+ LK+ DFG A F G + Y V + +
Sbjct: 110 QGIAYCHSHRVLHRDLKPQNL-LIDREGA--LKLADFGLARAF--GVPVRTYTHEVVTLW 164
Query: 192 YIAPEVL--RRRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEID-----F 244
Y APE+L R+Y +DIWS G I +++ P F ++ EID F
Sbjct: 165 YRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDS-----------EIDQLFRIF 213
Query: 245 ------DTDPWPSISS-------------------------TAKDLVRRMLTKDPKRRIT 273
D D WP ++S DL+ +ML DP +RI+
Sbjct: 214 RTLGTPDEDVWPGVTSLPDYKPTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRIS 273
Query: 274 AAQVLEHPWL 283
A L+HP+
Sbjct: 274 AKAALQHPYF 283
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression while the CDK1/cyclin B complex is critical for G2 to M phase transition. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. Studies in knockout mice revealed that CDK1 can compensate for the loss of the cdk2 gene as it can also bind cyclin E and drive G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 283 |
| >gnl|CDD|173709 cd05619, STKc_nPKC_theta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta | Back alignment and domain information |
|---|
Score = 93.9 bits (233), Expect = 3e-21
Identities = 78/267 (29%), Positives = 134/267 (50%), Gaps = 24/267 (8%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAEND----MIRREIQIRLYLSGQ- 83
+MLG+G FG +L TN+ +A K++ K + L ++D M+ + + L L+ +
Sbjct: 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKD--VVLMDDDVECTMVEKRV---LSLAWEH 55
Query: 84 PNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRA-IVNAVNVCHS 142
P + T++ + + VME GGDL I + + AT A I+ + HS
Sbjct: 56 PFLTHLYCTFQTKENLFFVMEYLNGGDLMFHI-QSCHKFDLPRATFYAAEIICGLQFLHS 114
Query: 143 MGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRD-IVGSGFYIAPEVLR-R 200
G+++RDLK +N I D + +K+ DFG G G+ YIAPE+L +
Sbjct: 115 KGIVYRDLKLDN---ILLDTDGHIKIADFGMCKENMLGDAKTCTFCGTPDYIAPEILLGQ 171
Query: 201 RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPS-ISSTAKDL 259
+Y +D WS GV+LY +L G PF ++ + + I D +P ++ AKD+
Sbjct: 172 KYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEELFQS-----IRMDNPCYPRWLTREAKDI 226
Query: 260 VRRMLTKDPKRRI-TAAQVLEHPWLRE 285
+ ++ ++P+RR+ + +HP+ RE
Sbjct: 227 LVKLFVREPERRLGVKGDIRQHPFFRE 253
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. Although T-cells also express other PKC isoforms, PKC-theta is unique in that upon antigen stimulation, it is translocated to the plasma membrane at the immunological synapse, where it mediates signals essential for T-cell activation. It is essential for TCR-induced proliferation, cytokine production, T-cell survival, and the differentiation and effector function of T-helper (Th) cells, particularly Th2 and Th17. PKC-theta is being developed as a therapeutic target for Th2-mediated allergic inflammation and Th17-mediated autoimmune diseases. Length = 316 |
| >gnl|CDD|173732 cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Score = 93.0 bits (231), Expect = 3e-21
Identities = 75/270 (27%), Positives = 131/270 (48%), Gaps = 21/270 (7%)
Query: 28 GRMLGRGQFGVSYLCTENSTNRPYACKSI------AKKPKMRLAENDMIRREIQIRLYLS 81
G ++G G FG YL S+ A K + A + + D + REI + L
Sbjct: 5 GALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQ 64
Query: 82 GQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCH 141
N+V++ + D +++ +E GG + + G E +R I+ +N H
Sbjct: 65 -HENIVQYLGSSLDADHLNIFLEYVPGGSVAALLNNYGAFEETLVRNFVRQILKGLNYLH 123
Query: 142 SMGVMHRDLKPENFSFISRDDNALLKVTDFG-------SALLFEEGQVYRDIVGSGFYIA 194
+ G++HRD+K N I D+ +K++DFG ++L + + GS F++A
Sbjct: 124 NRGIIHRDIKGAN---ILVDNKGGIKISDFGISKKLEANSLSTKTNGARPSLQGSVFWMA 180
Query: 195 PEVLRRR-YGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSIS 253
PEV+++ Y ++ DIWS G ++ +L+G PF T+ AI + + + +IS
Sbjct: 181 PEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQ---LQAIFKIGENASPEIPSNIS 237
Query: 254 STAKDLVRRMLTKDPKRRITAAQVLEHPWL 283
S A D + + D +R TAA++L+HP+L
Sbjct: 238 SEAIDFLEKTFEIDHNKRPTAAELLKHPFL 267
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Byr2 is regulated by Ras1. It responds to pheromone signaling and controls mating through the MAPK pathway. Budding yeast Ste11 functions in MAPK cascades that regulate mating, high osmolarity glycerol, and filamentous growth responses. Length = 267 |
| >gnl|CDD|173725 cd06608, STKc_myosinIII_like, Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 92.7 bits (231), Expect = 3e-21
Identities = 73/276 (26%), Positives = 111/276 (40%), Gaps = 37/276 (13%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFK 90
+G G +G Y T + A K + + E + I+ E I S PN+ F
Sbjct: 14 IGEGTYGKVYKARHKKTGQLVAIKIM----DIIEDEEEEIKEEYNILRKYSNHPNIATFY 69
Query: 91 STY--EDETAVHV----VMELCEGG---DLFDRIIAKGYN-SERDAATVLRAIVNAVNVC 140
+ ++ VMELC GG DL + KG E A +LR + +
Sbjct: 70 GAFIKKNPPGNDDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYL 129
Query: 141 HSMGVMHRDLKPENFSFISRDDNALLKVTDFG-SALLFEEGQVYRDIVGSGFYIAPEV-- 197
H V+HRD+K +N I NA +K+ DFG SA L +G+ +++APEV
Sbjct: 130 HENKVIHRDIKGQN---ILLTKNAEVKLVDFGVSAQLDSTLGRRNTFIGTPYWMAPEVIA 186
Query: 198 ----LRRRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSIS 253
Y D+WS G+ L G PP I + P P++
Sbjct: 187 CDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMRALFKIPRN-------PPPTLK 239
Query: 254 STAK------DLVRRMLTKDPKRRITAAQVLEHPWL 283
S D + L K+ ++R ++LEHP++
Sbjct: 240 SPENWSKKFNDFISECLIKNYEQRPFMEELLEHPFI 275
|
Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin III may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. It may also function as a cargo carrier during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. The Drosophila class III myosin, called NinaC (Neither inactivation nor afterpotential protein C), is critical in normal adaptation and termination of photoresponse. Vertebrates contain two isoforms of class III myosin, IIIA and IIIB. This subfamily also includes mammalian NIK-like embryo-specific kinase (NESK), Traf2- and Nck-interacting kinase (TNIK), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6). MAP4Ks are involved in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Length = 275 |
| >gnl|CDD|173764 cd08224, STKc_Nek6_Nek7, Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7 | Back alignment and domain information |
|---|
Score = 92.5 bits (230), Expect = 4e-21
Identities = 73/259 (28%), Positives = 123/259 (47%), Gaps = 18/259 (6%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFK 90
+G+GQF V Y R A K + M +EI + L PNV+++
Sbjct: 10 IGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLD-HPNVIKYL 68
Query: 91 STYEDETAVHVVMELCEGGDLFDRIIAKGYNSER--DAATVLRAIV---NAVNVCHSMGV 145
+++ + +++V+EL + GDL R+I +R T+ + V +A+ HS +
Sbjct: 69 ASFIENNELNIVLELADAGDL-SRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKRI 127
Query: 146 MHRDLKPENFSFISRDDNALLKVTDFGSALLF-EEGQVYRDIVGSGFYIAPEVLRRR-YG 203
MHRD+KP N FI+ ++K+ D G F + +VG+ +Y++PE + Y
Sbjct: 128 MHRDIKPANV-FITA--TGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYN 184
Query: 204 KEIDIWSAGVILYILLSGVPPFWAETKKGTYD---AILQGEIDFDTDPWPSISSTAKDLV 260
+ DIWS G +LY + + PF+ + K Y I + D+ P S +DLV
Sbjct: 185 FKSDIWSLGCLLYEMAALQSPFYGD-KMNLYSLCKKIEKC--DYPPLPADHYSEELRDLV 241
Query: 261 RRMLTKDPKRRITAAQVLE 279
R + DP++R + VL+
Sbjct: 242 SRCINPDPEKRPDISYVLQ 260
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may also be regulators of the p70 ribosomal S6 kinase. Length = 267 |
| >gnl|CDD|173750 cd07857, STKc_MPK1, Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1 | Back alignment and domain information |
|---|
Score = 93.2 bits (232), Expect = 6e-21
Identities = 92/343 (26%), Positives = 143/343 (41%), Gaps = 65/343 (18%)
Query: 24 HYFFGRMLGRGQFGV--SYLCTENSTNRPYACKSIAKK-PKMRLAENDMIRREIQIRLYL 80
Y + LG+G +G+ S E S A K I K LA+ + RE+++ +
Sbjct: 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRAL--RELKLLRHF 58
Query: 81 SGQPNVVE-------FKSTYEDETAVHVVMELCEGGDLFDRIIAKGYN-SERDAATVLRA 132
G N+ F + + +++ EL E DL +II G ++ + +
Sbjct: 59 RGHKNITCLYDMDIVFPGNFNE---LYLYEELMEA-DL-HQIIRSGQPLTDAHFQSFIYQ 113
Query: 133 IVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRD-----IV 187
I+ + HS V+HRDLKP N + + LK+ DFG A F E V
Sbjct: 114 ILCGLKYIHSANVLHRDLKPGNLLVNA---DCELKICDFGLARGFSENPGENAGFMTEYV 170
Query: 188 GSGFYIAPEVL--RRRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQ--GEID 243
+ +Y APE++ + Y K ID+WS G IL LL P F + + ILQ G D
Sbjct: 171 ATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPD 230
Query: 244 FDT---------------------DPWPSI----SSTAKDLVRRMLTKDPKRRITAAQVL 278
+T P+ SI + A DL+ ++L DP +RI+ + L
Sbjct: 231 EETLSRIGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEAL 290
Query: 279 EHPWLRESGEASDDTSVILRMKQFR-------RMNKLKKLTIK 314
EHP+L + D+ K F M +L+ + I+
Sbjct: 291 EHPYLAIWHDPDDEPVC---QKPFDFSFESEDSMEELRDMIIE 330
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall construction, morphogenesis, and ion homeostasis. MPK1 is activated in response to cell wall stress including heat stimulation, osmotic shock, UV irradiation, and any agents that interfere with cell wall biogenesis such as chitin antagonists, caffeine, or zymolase. MPK1 is regulated by the MAP2Ks Mkk1/2, which are regulated by the MAP3K Bck1. Pmk1 is also activated by multiple stresses including elevated temperatures, hyper- or hypotonic stress, glucose deprivation, exposure to cell-wall damaging compounds, and oxidative stress. It is regulated by the MAP2K Pek1, which is regulated by the MAP3K Mkh1. Length = 332 |
| >gnl|CDD|143354 cd07849, STKc_ERK1_2_like, Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 93.1 bits (232), Expect = 6e-21
Identities = 86/312 (27%), Positives = 134/312 (42%), Gaps = 46/312 (14%)
Query: 19 EDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRL 78
DV Y +G G +G+ T T A K I+ + + REI+I
Sbjct: 1 FDVGPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTL--REIKILR 58
Query: 79 YLSGQPNVVEFK-----STYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAI 133
+ N++ ++E V++V EL E DL+ ++I + S L I
Sbjct: 59 RFKHE-NIIGILDIIRPPSFESFNDVYIVQELMET-DLY-KLIKTQHLSNDHIQYFLYQI 115
Query: 134 VNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYR----DIVGS 189
+ + HS V+HRDLKP N + + N LK+ DFG A + + + + V +
Sbjct: 116 LRGLKYIHSANVLHRDLKPSN---LLLNTNCDLKICDFGLARIADPEHDHTGFLTEYVAT 172
Query: 190 GFYIAPEVL--RRRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQ-----GEI 242
+Y APE++ + Y K IDIWS G IL +LS P F + + IL +
Sbjct: 173 RWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGVLGTPSQE 232
Query: 243 DFDT------------------DPW----PSISSTAKDLVRRMLTKDPKRRITAAQVLEH 280
D + PW P+ A DL+ +MLT +P +RIT + L H
Sbjct: 233 DLNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAH 292
Query: 281 PWLRESGEASDD 292
P+L + + SD+
Sbjct: 293 PYLEQYHDPSDE 304
|
Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase kinase from the Raf family. ERK1/2 have numerous substrates, many of which are nuclear and participate in transcriptional regulation of many cellular processes. They regulate cell growth, cell proliferation, and cell cycle progression from G1 to S phase. Although the distinct roles of ERK1 and ERK2 have not been fully determined, it is known that ERK2 can maintain most functions in the absence of ERK1, and that the deletion of ERK2 is embryonically lethal. The MAPK, Fus3, regulates yeast mating processes including mating-specific gene expression, G1 arrest, mating projection, and cell fusion. Length = 336 |
| >gnl|CDD|173722 cd05633, STKc_GRK3, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3 | Back alignment and domain information |
|---|
Score = 92.0 bits (228), Expect = 7e-21
Identities = 75/264 (28%), Positives = 128/264 (48%), Gaps = 14/264 (5%)
Query: 30 MLGRGQFGVSYLCTENSTNRPYACKSIAKKP-KMRLAENDMIRREIQIRLYLSGQ-PNVV 87
++GRG FG Y C + T + YA K + KK KM+ E + I + L +G P +V
Sbjct: 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIV 60
Query: 88 EFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMH 147
+ + +++L GGDL + G SE++ I+ + H+ V++
Sbjct: 61 CMTYAFHTPDKLCFILDLMNGGDLHYHLSQHGVFSEKEMRFYATEIILGLEHMHNRFVVY 120
Query: 148 RDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLRR--RYGKE 205
RDLKP N I D++ ++++D G A F + + + VG+ Y+APEVL++ Y
Sbjct: 121 RDLKPAN---ILLDEHGHVRISDLGLACDFSKKKPHAS-VGTHGYMAPEVLQKGTAYDSS 176
Query: 206 IDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLT 265
D +S G +L+ LL G PF K ++ I + + + + S S K L+ +L
Sbjct: 177 ADWFSLGCMLFKLLRGHSPFRQHKTKDKHE-IDRMTLTVNVELPDSFSPELKSLLEGLLQ 235
Query: 266 KDPKRRI-----TAAQVLEHPWLR 284
+D +R+ A +V EH + +
Sbjct: 236 RDVSKRLGCLGRGAQEVKEHVFFK 259
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is widely expressed in many tissues. GRK3-deficient mice show a lack of olfactory receptor desensitization and altered regulation of the M2 muscarinic airway. GRK3 is involved in modulating the cholinergic response of airway smooth muscles. It also plays a role in dopamine receptor regulation. GRK3 promoter polymorphisms may be associated with bipolar disorder. Length = 279 |
| >gnl|CDD|143363 cd07858, STKc_TEY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Score = 92.8 bits (231), Expect = 8e-21
Identities = 87/308 (28%), Positives = 128/308 (41%), Gaps = 63/308 (20%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIR--REIQIRLYLSGQPNVVE 88
+GRG +G+ + TN A K IA R+ D R REI++ +L + NV+
Sbjct: 13 IGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRI---DAKRTLREIKLLRHLDHE-NVIA 68
Query: 89 FK--------STYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVC 140
K + D V++V EL + DL I + S+ L ++ +
Sbjct: 69 IKDIMPPPHREAFND---VYIVYELMDT-DLHQIIRSSQTLSDDHCQYFLYQLLRGLKYI 124
Query: 141 HSMGVMHRDLKPENFSFISRDDNALLKVTDFGSA-LLFEEGQVYRDIVGSGFYIAPEVLR 199
HS V+HRDLKP N + N LK+ DFG A E+G + V + +Y APE+L
Sbjct: 125 HSANVLHRDLKPSNLLL---NANCDLKICDFGLARTTSEKGDFMTEYVVTRWYRAPELLL 181
Query: 200 R--RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQ-------------GEIDF 244
Y ID+WS G I LL P F G D + Q ++ F
Sbjct: 182 NCSEYTTAIDVWSVGCIFAELLGRKPLF-----PGK-DYVHQLKLITELLGSPSEEDLGF 235
Query: 245 DTDP--------------------WPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLR 284
+ +P + A DL+ +ML DP +RIT + L HP+L
Sbjct: 236 IRNEKARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYLA 295
Query: 285 ESGEASDD 292
+ SD+
Sbjct: 296 SLHDPSDE 303
|
Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. This subfamily represents the TEY subtype and is further subdivided into three groups (A, B, and C). Group A is represented by AtMPK3, AtMPK6, Nicotiana tabacum BTF4 (NtNTF4), among others. They are mostly involved in environmental and hormonal responses. AtMPK3 and AtMPK6 are also key regulators for stomatal development and patterning. Group B is represented by AtMPK4, AtMPK13, and NtNTF6, among others. They may be involved in both cell division and environmental stress response. AtMPK4 also participates in regulating innate immunity. Group C is represented by AtMPK1, AtMPK2, NtNTF3, Oryza sativa MAPK4 (OsMAPK4), among others. They may also be involved in stress responses. AtMPK1 and AtMPK2 are activated following mechanical injury and in the presence of stress chemicals such as jasmonic acid, hydrogen peroxide and abscisic acid. OsMAPK4 is also called OsMSRMK3 for Multiple Stress-Responsive MAPK3. Length = 337 |
| >gnl|CDD|132964 cd06633, STKc_TAO3, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3 | Back alignment and domain information |
|---|
Score = 92.4 bits (229), Expect = 9e-21
Identities = 78/294 (26%), Positives = 129/294 (43%), Gaps = 28/294 (9%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFK 90
+G G FG Y T + TN A K ++ K + I +E++ L PN +E+K
Sbjct: 29 IGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLK-HPNTIEYK 87
Query: 91 STYEDETAVHVVMELCEG--GDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHR 148
Y E +VME C G DL + + K E + A + + + HS ++HR
Sbjct: 88 GCYLKEHTAWLVMEYCLGSASDLLE--VHKKPLQEVEIAAITHGALQGLAYLHSHNMIHR 145
Query: 149 DLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVL----RRRYGK 204
D+K N I + +K+ DFGSA + VG+ +++APEV+ +Y
Sbjct: 146 DIKAGN---ILLTEPGQVKLADFGSASKSSPANSF---VGTPYWMAPEVILAMDEGQYDG 199
Query: 205 EIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEI-DFDTDPWPSISSTAKDLVRRM 263
++D+WS G+ L PP + I Q + ++ W + + + V
Sbjct: 200 KVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNDSPTLQSNEW---TDSFRGFVDYC 256
Query: 264 LTKDPKRRITAAQVLEHPWLRESGEASDDTSVILRMK---------QFRRMNKL 308
L K P+ R +A++L H ++R A +I R K Q+R+M K+
Sbjct: 257 LQKIPQERPASAELLRHDFVRRDRPARVLIDLIQRTKDAVRELDNLQYRKMKKI 310
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a component of the RAM (regulation of Ace2p activity and cellular morphogenesis) signaling pathway. TAO3 is upregulated in retinal ganglion cells after axotomy, and may play a role in apoptosis. Length = 313 |
| >gnl|CDD|132976 cd06645, STKc_MAP4K3, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3 | Back alignment and domain information |
|---|
Score = 91.7 bits (227), Expect = 9e-21
Identities = 76/266 (28%), Positives = 122/266 (45%), Gaps = 29/266 (10%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFK 90
+G G +G Y +T A K I +P + ++++EI I + N+V +
Sbjct: 17 IGSGTYGDVYKARNVNTGELAAIKVIKLEPG---EDFAVVQQEI-IMMKDCKHSNIVAYF 72
Query: 91 STYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDL 150
+Y + + ME C GG L D G SE A V R + + HS G MHRD+
Sbjct: 73 GSYLRRDKLWICMEFCGGGSLQDIYHVTGPLSESQIAYVSRETLQGLYYLHSKGKMHRDI 132
Query: 151 KPENFSFISRDDNALLKVTDFG-SALLFEEGQVYRDIVGSGFYIAPEV--LRRR--YGKE 205
K N I DN +K+ DFG SA + + +G+ +++APEV + R+ Y +
Sbjct: 133 KGAN---ILLTDNGHVKLADFGVSAQITATIAKRKSFIGTPYWMAPEVAAVERKGGYNQL 189
Query: 206 IDIWSAGVILYILLSGVPP---------FWAETKKGTYDAILQGEIDFDTDPWPSISSTA 256
DIW+ G+ L PP + TK L+ ++ + S++
Sbjct: 190 CDIWAVGITAIELAELQPPMFDLHPMRALFLMTKSNFQPPKLKDKMKW--------SNSF 241
Query: 257 KDLVRRMLTKDPKRRITAAQVLEHPW 282
V+ LTK+PK+R TA ++L+HP+
Sbjct: 242 HHFVKMALTKNPKKRPTAEKLLQHPF 267
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. MAP4K3 is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. mTOR regulates ribosome biogenesis and protein translation, and is frequently deregulated in cancer. Length = 267 |
| >gnl|CDD|140293 PTZ00267, PTZ00267, NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 94.3 bits (234), Expect = 1e-20
Identities = 64/208 (30%), Positives = 108/208 (51%), Gaps = 16/208 (7%)
Query: 86 VVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYN----SERDAATVLRAIVNAVNVCH 141
+V+ ++ + + ++ME GGDL +I + E + + IV A++ H
Sbjct: 127 IVKHFDDFKSDDKLLLIMEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVH 186
Query: 142 SMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEG---QVYRDIVGSGFYIAPEVL 198
S +MHRDLK N + ++K+ DFG + + + V G+ +Y+APE+
Sbjct: 187 SRKMMHRDLKSANIFLMP---TGIIKLGDFGFSKQYSDSVSLDVASSFCGTPYYLAPELW 243
Query: 199 -RRRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWP-SISSTA 256
R+RY K+ D+WS GVILY LL+ PF +++ +L G+ DP+P +SS
Sbjct: 244 ERKRYSKKADMWSLGVILYELLTLHRPFKGPSQREIMQQVLYGKY----DPFPCPVSSGM 299
Query: 257 KDLVRRMLTKDPKRRITAAQVLEHPWLR 284
K L+ +L+K+P R T Q+L +L+
Sbjct: 300 KALLDPLLSKNPALRPTTQQLLHTEFLK 327
|
Length = 478 |
| >gnl|CDD|177649 PLN00009, PLN00009, cyclin-dependent kinase A; Provisional | Back alignment and domain information |
|---|
Score = 91.8 bits (228), Expect = 1e-20
Identities = 87/299 (29%), Positives = 129/299 (43%), Gaps = 55/299 (18%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAEND-----MIRREIQIRLYLSGQPN 85
+G G +GV Y + TN A K K+RL + D REI + L N
Sbjct: 10 IGEGTYGVVYKARDRVTNETIALK------KIRLEQEDEGVPSTAIREISL-LKEMQHGN 62
Query: 86 VVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAA-------TVLRAIVNAVN 138
+V + E +++V E D + K +S D A T L I+ +
Sbjct: 63 IVRLQDVVHSEKRLYLVFEY------LDLDLKKHMDSSPDFAKNPRLIKTYLYQILRGIA 116
Query: 139 VCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFE-EGQVYRDIVGSGFYIAPEV 197
CHS V+HRDLKP+N I R NA LK+ DFG A F + + V + +Y APE+
Sbjct: 117 YCHSHRVLHRDLKPQNL-LIDRRTNA-LKLADFGLARAFGIPVRTFTHEVVTLWYRAPEI 174
Query: 198 L--RRRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISS- 254
L R Y +DIWS G I +++ P F +++ I + + + WP ++S
Sbjct: 175 LLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEETWPGVTSL 234
Query: 255 ------------------------TAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEA 289
DL+ +ML DP +RITA LEH + ++ G+A
Sbjct: 235 PDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALEHEYFKDLGDA 293
|
Length = 294 |
| >gnl|CDD|173743 cd07846, STKc_CDKL2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3 | Back alignment and domain information |
|---|
Score = 90.9 bits (226), Expect = 2e-20
Identities = 75/289 (25%), Positives = 130/289 (44%), Gaps = 47/289 (16%)
Query: 30 MLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIR----REIQIRLYLSGQPN 85
++G G +G+ C T + A K + ++ M++ REI++ L + N
Sbjct: 8 LVGEGSYGMVMKCKHKETGQIVAIKKFLESE-----DDKMVKKIAMREIRMLKQLRHE-N 61
Query: 86 VVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGV 145
+V + + +++V E + L D E L I+ + CHS +
Sbjct: 62 LVNLIEVFRRKKRLYLVFEFVDHTVLDDLEKYPNGLDESRVRKYLFQILRGIEFCHSHNI 121
Query: 146 MHRDLKPENFSFISRDDNALLKVTDFGSA-LLFEEGQVYRDIVGSGFYIAPEVL--RRRY 202
+HRD+KPEN +S+ + ++K+ DFG A L G+VY D V + +Y APE+L +Y
Sbjct: 122 IHRDIKPENI-LVSQ--SGVVKLCDFGFARTLAAPGEVYTDYVATRWYRAPELLVGDTKY 178
Query: 203 GKEIDIWSAGVILYILLSGVPPFWAET----------KKGTYDAILQGEIDFDTDP---- 248
G+ +DIW+ G ++ +L+G P F ++ G Q EI F +P
Sbjct: 179 GRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQ-EI-FQKNPLFAG 236
Query: 249 ---------------WPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPW 282
+P +S DL ++ L DP R +++Q+L H +
Sbjct: 237 MRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLHHEF 285
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKIAMRE (NKIATRE in rat), by translocation is associated with mild mental retardation. It has been reported that CDKL3 is lost in leukemic cells having a chromosome arm 5q deletion, and may contribute to the transformed phenotype. Length = 286 |
| >gnl|CDD|143341 cd07836, STKc_Pho85, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85 | Back alignment and domain information |
|---|
Score = 90.2 bits (224), Expect = 3e-20
Identities = 69/244 (28%), Positives = 99/244 (40%), Gaps = 40/244 (16%)
Query: 72 REIQIRLYLSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATV-- 129
REI + L N+V E + +V E + DL + G D TV
Sbjct: 47 REISLMKELK-HENIVRLHDVIHTENKLMLVFEYMDK-DLKKYMDTHGVRGALDPNTVKS 104
Query: 130 -LRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEG---QVYRD 185
++ + CH V+HRDLKP+N R + LK+ DFG A F G + +
Sbjct: 105 FTYQLLKGIAFCHENRVLHRDLKPQNLLINKRGE---LKLADFGLARAF--GIPVNTFSN 159
Query: 186 IVGSGFYIAPEVL--RRRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEID 243
V + +Y AP+VL R Y IDIWS G I+ +++G P F + I +
Sbjct: 160 EVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGT 219
Query: 244 FDTDPWPSISS-------------------------TAKDLVRRMLTKDPKRRITAAQVL 278
WP IS DL+ R+L +P+ RI+A L
Sbjct: 220 PTESTWPGISQLPEYKPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDAL 279
Query: 279 EHPW 282
+HPW
Sbjct: 280 QHPW 283
|
Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. It is not essential for yeast viability and is the functional homolog of mammalian CDK5, which plays a role in central nervous system development. Length = 284 |
| >gnl|CDD|173740 cd07842, STKc_CDK8_like, Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 90.4 bits (225), Expect = 4e-20
Identities = 86/334 (25%), Positives = 127/334 (38%), Gaps = 96/334 (28%)
Query: 25 YFFGRMLGRGQFGVSYLC--TENSTNRPYACKSIAKKPKMRLAENDM--IR-----REIQ 75
Y +GRG +G Y + YA K K K + R RE++
Sbjct: 2 YEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKF-KGDKEQYTGISQSACREIALLRELK 60
Query: 76 IRLYLSGQPNVVEFKSTYEDETA--VHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAI 133
NVV + + V+++ + E DL+ +II ++ + ++ ++
Sbjct: 61 -------HENVVSLVEVFLEHADKSVYLLFDYAEH-DLW-QIIK--FHRQAKRVSIPPSM 109
Query: 134 V--------NAVNVCHSMGVMHRDLKPENFSFISRDDNA--LLKVTDFGSA--------L 175
V N V+ HS V+HRDLKP N + + ++K+ D G A
Sbjct: 110 VKSLLWQILNGVHYLHSNWVLHRDLKPANI-LVMGEGPERGVVKIGDLGLARLFNAPLKP 168
Query: 176 LFEEGQVYRDIVGSGFYIAPEVL--RRRYGKEIDIWSAGVILYILLSGVPPFW---AETK 230
L + V V + +Y APE+L R Y K IDIW+ G I LL+ P F A+ K
Sbjct: 169 LADLDPV----VVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIK 224
Query: 231 KGT---YDAILQGEIDF------DTDPWPSI----------------------------- 252
K D Q E F WP I
Sbjct: 225 KSNPFQRD---QLERIFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEK 281
Query: 253 ----SSTAKDLVRRMLTKDPKRRITAAQVLEHPW 282
S DL+R++L DP +RITA + LEHP+
Sbjct: 282 HKKPDSQGFDLLRKLLEYDPTKRITAEEALEHPY 315
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDC2L6 also associates with Mediator in complexes lacking CDK8. In VP16-dependent transcriptional activation, CDK8 and CDC2L6 exerts opposing effects by positive and negative regulation, respectively, in similar conditions. Length = 316 |
| >gnl|CDD|132971 cd06640, STKc_MST4, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4 | Back alignment and domain information |
|---|
Score = 89.7 bits (222), Expect = 4e-20
Identities = 79/282 (28%), Positives = 141/282 (50%), Gaps = 25/282 (8%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDM--IRREIQIRLYLSGQPNVVE 88
+G+G FG + +N T + A K I + AE+++ I++EI + L P V +
Sbjct: 12 IGKGSFGEVFKGIDNRTQQVVAIKII----DLEEAEDEIEDIQQEITV-LSQCDSPYVTK 66
Query: 89 FKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHR 148
+ +Y T + ++ME GG D + A ++ E AT+L+ I+ ++ HS +HR
Sbjct: 67 YYGSYLKGTKLWIIMEYLGGGSALDLLRAGPFD-EFQIATMLKEILKGLDYLHSEKKIHR 125
Query: 149 DLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRD-IVGSGFYIAPEVLRRR-YGKEI 206
D+K N + D +K+ DFG A + Q+ R+ VG+ F++APEV+++ Y +
Sbjct: 126 DIKAANVLLSEQGD---VKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIQQSAYDSKA 182
Query: 207 DIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSI----SSTAKDLVRR 262
DIWS G+ L G PP + ++ + P++ S K+ +
Sbjct: 183 DIWSLGITAIELAKGEPP-------NSDMHPMRVLFLIPKNNPPTLTGEFSKPFKEFIDA 235
Query: 263 MLTKDPKRRITAAQVLEHPWL-RESGEASDDTSVILRMKQFR 303
L KDP R TA ++L+H ++ + + + S T +I R K+++
Sbjct: 236 CLNKDPSFRPTAKELLKHKFIVKNAKKTSYLTELIDRFKRWK 277
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by interacting with the Golgi matrix protein GM130 and may play a role in cell migration. Length = 277 |
| >gnl|CDD|132952 cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Score = 89.4 bits (222), Expect = 6e-20
Identities = 78/278 (28%), Positives = 126/278 (45%), Gaps = 36/278 (12%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLS---GQPNVV 87
LG G G C +T +A K+I P N ++++I L ++ P +V
Sbjct: 9 LGEGAGGSVTKCRLKNTGMIFALKTITTDP------NPDLQKQILRELEINKSCKSPYIV 62
Query: 88 EFKSTYEDE--TAVHVVMELCEGGDLFDRIIAK-----GYNSERDAATVLRAIVNAVNVC 140
++ + DE +++ + ME CEGG L D I K G E+ + +++ ++
Sbjct: 63 KYYGAFLDESSSSIGIAMEYCEGGSL-DSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYL 121
Query: 141 HSMGVMHRDLKPENFSFISRDDNALLKVTDFG-SALLFEEGQVYRDIVGSGFYIAPEVLR 199
HS ++HRD+KP N I +K+ DFG S L G+ FY+APE ++
Sbjct: 122 HSRKIIHRDIKPSN---ILLTRKGQVKLCDFGVSGELVNSLA--GTFTGTSFYMAPERIQ 176
Query: 200 -RRYGKEIDIWSAGVILYILLSGVPPFWAETKKG-------TYDAILQGEI-DFDTDPWP 250
+ Y D+WS G+ L + PF E + +Y I+ + +P
Sbjct: 177 GKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSY--IVNMPNPELKDEPGN 234
Query: 251 SI--SSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRES 286
I S KD +++ L KDP RR T +LEHPW++
Sbjct: 235 GIKWSEEFKDFIKQCLEKDPTRRPTPWDMLEHPWIKAQ 272
|
Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Pek1/Skh1 from Schizosaccharomyces pombe and MKK2 from Saccharomyces cerevisiae, and related proteins. Both fission yeast Pek1 and baker's yeast MKK2 are components of the cell integrity MAPK pathway. In fission yeast, Pek1 phosphorylates and activates the MAPK Pmk1/Spm1 and is regulated by the MAPKKK Mkh1. In baker's yeast, the pathway involves the MAPK Slt2, the MAPKKs MKK1 and MKK2, and the MAPKKK Bck1. The cell integrity MAPK cascade is activated by multiple stress conditions, and is essential in cell wall construction, morphogenesis, cytokinesis, and ion homeostasis. Length = 287 |
| >gnl|CDD|240344 PTZ00283, PTZ00283, serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 91.1 bits (226), Expect = 1e-19
Identities = 110/466 (23%), Positives = 191/466 (40%), Gaps = 71/466 (15%)
Query: 25 YFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQP 84
Y+ R+LG G G S P+A K + + ++E D R + ++ L+
Sbjct: 34 YWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEG---MSEADKNRAQAEVCCLLN--- 87
Query: 85 NVVEFKS--------TYEDE------TAVHVVMELCEGGDLFDRIIAKGYNS----ERDA 126
+F S +D + +V++ GDL I ++ + E +A
Sbjct: 88 --CDFFSIVKCHEDFAKKDPRNPENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEA 145
Query: 127 ATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFE---EGQVY 183
+ ++ AV+ HS ++HRD+K N S N L+K+ DFG + ++ V
Sbjct: 146 GLLFIQVLLAVHHVHSKHMIHRDIKSANILLCS---NGLVKLGDFGFSKMYAATVSDDVG 202
Query: 184 RDIVGSGFYIAPEVLRRR-YGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEI 242
R G+ +Y+APE+ RR+ Y K+ D++S GV+LY LL+ PF E + L G
Sbjct: 203 RTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGENMEEVMHKTLAGR- 261
Query: 243 DFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPW-------LRE--------SG 287
+D P PSIS +++V +L+ DPKRR +++++L P L E SG
Sbjct: 262 -YDPLP-PSISPEMQEIVTALLSSDPKRRPSSSKLLNMPICKLFISGLLEIVQTQPGFSG 319
Query: 288 EASDDTS----------VILRMKQFRRMNKLKKLTIKVIVEYLPDEETQA---------L 328
D S + R + R+M + + T +
Sbjct: 320 PLRDTISRQIQQTKQLLQVERRRIVRQMEESLSTAASTTILEGATPLTTLGGLTLYEGIV 379
Query: 329 KEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNSSTLESLCENLPTKE 388
K++ ++ + EL G T + +F L+ AV + TLE C + P +
Sbjct: 380 KKQSSDLSWKRRYLCIRGELEKGETLTVDVAPKFKSLDLVLAV-SKDTLEQQCISTPFSD 438
Query: 389 KQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEA 434
+ + + N+ + K G L A + E + +M+
Sbjct: 439 LEDVFPVPSKYTGSNAAHVFAVAFKTGRRLLFQARSDPERDAWMQK 484
|
Length = 496 |
| >gnl|CDD|173753 cd07864, STKc_CDK12, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12 | Back alignment and domain information |
|---|
Score = 88.7 bits (220), Expect = 2e-19
Identities = 83/313 (26%), Positives = 129/313 (41%), Gaps = 59/313 (18%)
Query: 18 YEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAEND------MIR 71
+ + + +G G +G Y + T A K K+RL +N+
Sbjct: 2 GKRCVDKFDIIGQIGEGTYGQVYKARDKDTGELVALK------KVRL-DNEKEGFPITAI 54
Query: 72 REIQIRLYLSGQPNVVEFKSTYEDET----------AVHVVMELCEGGDLFDRIIAKGYN 121
REI+I L+ N+V K D+ A ++V E + DL + + +
Sbjct: 55 REIKILRQLN-HRNIVNLKEIVTDKQDALDFKKDKGAFYLVFEYMDH-DLMGLLESGLVH 112
Query: 122 -SERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLF--E 178
SE + ++ ++ +N CH +HRD+K N I ++ +K+ DFG A L+ E
Sbjct: 113 FSEDHIKSFMKQLLEGLNYCHKKNFLHRDIKCSN---ILLNNKGQIKLADFGLARLYNSE 169
Query: 179 EGQVYRDIVGSGFYIAPEVL--RRRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDA 236
E + Y + V + +Y PE+L RYG ID+WS G IL L + P F A + +
Sbjct: 170 ESRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQELAQLEL 229
Query: 237 ILQGEIDFDTDPWPS--------------------------ISSTAKDLVRRMLTKDPKR 270
I + WP I + A DL+ MLT DP +
Sbjct: 230 ISRLCGSPCPAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSK 289
Query: 271 RITAAQVLEHPWL 283
R TA + L PWL
Sbjct: 290 RCTAEEALNSPWL 302
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely expressed in tissues. It interacts with cyclins L1 and L2, and plays roles in regulating transcription and alternative splicing. Length = 302 |
| >gnl|CDD|173749 cd07855, STKc_ERK5, Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5 | Back alignment and domain information |
|---|
Score = 88.9 bits (221), Expect = 2e-19
Identities = 79/294 (26%), Positives = 119/294 (40%), Gaps = 46/294 (15%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKM-RLAENDMIRREIQIRLYLSGQPNVV 87
+G G +GV + + + A K I + LA+ + RE++I + N++
Sbjct: 11 ENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTL--RELKILRHFK-HDNII 67
Query: 88 E----FKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSM 143
+ D V+VVM+L E DL I + +E L ++ + HS
Sbjct: 68 AIRDILRPPGADFKDVYVVMDLMES-DLHHIIHSDQPLTEEHIRYFLYQLLRGLKYIHSA 126
Query: 144 GVMHRDLKPENFSFISRDDNALLKVTDFGSALLF-----EEGQVYRDIVGSGFYIAPEVL 198
V+HRDLKP N +++ L++ DFG A E + V + +Y APE+L
Sbjct: 127 NVIHRDLKPSNLLV---NEDCELRIGDFGMARGLSSSPTEHKYFMTEYVATRWYRAPELL 183
Query: 199 --RRRYGKEIDIWSAGVI-------------------LYILLS--GVPP--FWAETKKGT 233
Y ID+WS G I L ++LS G P
Sbjct: 184 LSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSEEVLNRIGSDR 243
Query: 234 YDAILQGEIDFDTDPW----PSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWL 283
+Q PW P S A DL+ +ML DP+ RIT Q L+HP+L
Sbjct: 244 VRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQHPFL 297
|
Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the MAP2K MEK5, which in turn is regulated by the MAP3Ks MEKK2 and MEKK3. Activated ERK5 phosphorylates its targets including myocyte enhancer factor 2 (MEF2), Sap1a, c-Myc, and RSK. It plays a role in EGF-induced cell proliferation during the G1/S phase transition. Studies on knockout mice revealed that ERK5 is essential for cardiovascular development and plays an important role in angiogenesis. It is also critical for neural differentiation and survival. The ERK5 pathway has been implicated in the pathogenesis of many diseases including cancer, cardiac hypertrophy, and atherosclerosis. Length = 334 |
| >gnl|CDD|173708 cd05617, STKc_aPKC_zeta, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta | Back alignment and domain information |
|---|
Score = 88.5 bits (219), Expect = 2e-19
Identities = 68/249 (27%), Positives = 116/249 (46%), Gaps = 8/249 (3%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVE 88
R++GRG + L ++ YA K + K+ + D ++ E + S P +V
Sbjct: 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVG 60
Query: 89 FKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHR 148
S ++ + + +V+E GGDL + + E A I A+N H G+++R
Sbjct: 61 LHSCFQTTSRLFLVIEYVNGGDLMFHMQRQRKLPEEHARFYAAEICIALNFLHERGIIYR 120
Query: 149 DLKPENFSFISRDDNALLKVTDFGSALL-FEEGQVYRDIVGSGFYIAPEVLR-RRYGKEI 206
DLK +N + D + +K+TD+G G G+ YIAPE+LR YG +
Sbjct: 121 DLKLDN---VLLDADGHIKLTDYGMCKEGLGPGDTTSTFCGTPNYIAPEILRGEEYGFSV 177
Query: 207 DIWSAGVILYILLSGVPPFWAETKK---GTYDAILQGEIDFDTDPWPSISSTAKDLVRRM 263
D W+ GV+++ +++G PF T T D + Q ++ +S A +++
Sbjct: 178 DWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILEKPIRIPRFLSVKASHVLKGF 237
Query: 264 LTKDPKRRI 272
L KDPK R+
Sbjct: 238 LNKDPKERL 246
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways. PKC-zeta also plays a central role in maintaining cell polarity in yeast and mammalian cells. In addition, it affects actin remodeling in muscle cells. Length = 327 |
| >gnl|CDD|132966 cd06635, STKc_TAO1, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1 | Back alignment and domain information |
|---|
Score = 88.2 bits (218), Expect = 3e-19
Identities = 82/296 (27%), Positives = 131/296 (44%), Gaps = 28/296 (9%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVE 88
R +G G FG Y + TN A K ++ K + I +E++ L PN +E
Sbjct: 31 REIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKF-LQRIKHPNSIE 89
Query: 89 FKSTYEDETAVHVVMELCEG--GDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVM 146
+K Y E +VME C G DL + + K E + A + + + HS ++
Sbjct: 90 YKGCYLREHTAWLVMEYCLGSASDLLE--VHKKPLQEVEIAAITHGALQGLAYLHSHNMI 147
Query: 147 HRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVL----RRRY 202
HRD+K N I + +K+ DFGSA + + VG+ +++APEV+ +Y
Sbjct: 148 HRDIKAGN---ILLTEPGQVKLADFGSASIASPANSF---VGTPYWMAPEVILAMDEGQY 201
Query: 203 GKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEI-DFDTDPWPSISSTAKDLVR 261
++D+WS G+ L PP + I Q E ++ W S ++ V
Sbjct: 202 DGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPTLQSNEW---SDYFRNFVD 258
Query: 262 RMLTKDPKRRITAAQVLEHPW-LRESGEA--------SDDTSVILRMKQFRRMNKL 308
L K P+ R T+ ++L+H + LRE E + D L Q+R+M KL
Sbjct: 259 SCLQKIPQDRPTSEELLKHMFVLRERPETVLIDLIQRTKDAVRELDNLQYRKMKKL 314
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuronal apoptosis. TAO1 interacts with the checkpoint proteins BubR1 and Mad2, and plays an important role in regulating mitotic progression, which is required for both chromosome congression and checkpoint-induced anaphase delay. TAO1 may play a role in protecting genomic stability. Length = 317 |
| >gnl|CDD|143364 cd07859, STKc_TDY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Score = 87.9 bits (218), Expect = 5e-19
Identities = 94/341 (27%), Positives = 150/341 (43%), Gaps = 58/341 (17%)
Query: 30 MLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEF 89
++G+G +GV + T A K I + +++ I REI++ L L P++VE
Sbjct: 7 VIGKGSYGVVCSAIDTHTGEKVAIKKINDVFE-HVSDATRILREIKL-LRLLRHPDIVEI 64
Query: 90 KS--------TYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCH 141
K ++D ++VV EL E DL I A + L ++ A+ H
Sbjct: 65 KHIMLPPSRREFKD---IYVVFELMES-DLHQVIKANDDLTPEHHQFFLYQLLRALKYIH 120
Query: 142 SMGVMHRDLKPENFSFISRDDNALLKVTDFGSA-LLFEEGQ---VYRDIVGSGFYIAPEV 197
+ V HRDLKP+N I + + LK+ DFG A + F + + D V + +Y APE+
Sbjct: 121 TANVFHRDLKPKN---ILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPEL 177
Query: 198 ---LRRRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAI--LQGEIDFDT------ 246
+Y IDIWS G I +L+G P F + D I L G +T
Sbjct: 178 CGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPETISRVRN 237
Query: 247 -------------------DPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESG 287
+P+ A L+ R+L DPK R TA + L P+ +
Sbjct: 238 EKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALADPYFKGLA 297
Query: 288 EASDDTS--VILRMK-QF--RRMNK--LKKLTIKVIVEYLP 321
+ + S I +++ +F RR+ K +++L + I+EY P
Sbjct: 298 KVEREPSAQPITKLEFEFERRRLTKEDVRELIYREILEYHP 338
|
Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. Arabidopsis thaliana contains more TEY-type MAPKs than TDY-type, whereas the reverse is true for Oryza sativa. This subfamily represents the TDY subtype and is composed of Group D plant MAPKs including Arabidopsis thaliana MPK18 (AtMPK18), Oryza sativa Blast- and Wound-induced MAPK1 (OsBWMK1), OsWJUMK1 (Wound- and JA-Uninducible MAPK1), Zea mays MPK6, and the Medicago sativa TDY1 gene product. OsBWMK1 enhances resistance to pathogenic infections. It mediates stress-activated defense responses by activating a transcription factor that affects the expression of stress-related genes. AtMPK18 is involved in microtubule-related functions. Length = 338 |
| >gnl|CDD|132965 cd06634, STKc_TAO2, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2 | Back alignment and domain information |
|---|
Score = 87.0 bits (215), Expect = 5e-19
Identities = 76/296 (25%), Positives = 128/296 (43%), Gaps = 28/296 (9%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVE 88
R +G G FG Y + + A K ++ K + I +E++ L PN ++
Sbjct: 21 REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLR-HPNTIQ 79
Query: 89 FKSTYEDETAVHVVMELCEG--GDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVM 146
++ Y E +VME C G DL + + K E + A V + + HS ++
Sbjct: 80 YRGCYLREHTAWLVMEYCLGSASDLLE--VHKKPLQEVEIAAVTHGALQGLAYLHSHNMI 137
Query: 147 HRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVL----RRRY 202
HRD+K N I + L+K+ DFGSA + + VG+ +++APEV+ +Y
Sbjct: 138 HRDVKAGN---ILLSEPGLVKLGDFGSASIMAPANXF---VGTPYWMAPEVILAMDEGQY 191
Query: 203 GKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEID-FDTDPWPSISSTAKDLVR 261
++D+WS G+ L PP + I Q E + W S ++ V
Sbjct: 192 DGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHW---SEYFRNFVD 248
Query: 262 RMLTKDPKRRITAAQVLEHPWLRESGEASDDTSVILRMK---------QFRRMNKL 308
L K P+ R T+ +L+H ++ + +I R K Q+R+M K+
Sbjct: 249 SCLQKIPQDRPTSEVLLKHRFVLRERPPTVIMDLIQRTKDAVRELDNLQYRKMKKI 304
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. TAO2 contains a long C-terminal extension with autoinhibitory segments. It is activated by the release of this inhibition and the phosphorylation of its activation loop serine. TAO2 functions as a regulator of actin cytoskeletal and microtubule organization. In addition, it regulates the transforming growth factor-activated kinase 1 (TAK1), which is a MAPKKK that plays an essential role in the signaling pathways of tumor necrosis factor (TNF), interleukin 1 (IL-1), and Toll-like receptor (TLR). Length = 308 |
| >gnl|CDD|240233 PTZ00024, PTZ00024, cyclin-dependent protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 87.1 bits (216), Expect = 7e-19
Identities = 76/315 (24%), Positives = 121/315 (38%), Gaps = 69/315 (21%)
Query: 26 FFGRMLGRGQFGVSYLCTENSTNRPYACKS--IAKKPKMRLAENDMIR---------REI 74
G LG G +G + T + A K I + + ++ RE+
Sbjct: 12 QKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLREL 71
Query: 75 QIRLYLSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIV 134
+I + N++ Y + +++VM++ DL + K +E +L I+
Sbjct: 72 KIMNEIK-HENIMGLVDVYVEGDFINLVMDIMAS-DLKKVVDRKIRLTESQVKCILLQIL 129
Query: 135 NAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDI-------- 186
N +NV H MHRDL P N FI + + K+ DFG A + +
Sbjct: 130 NGLNVLHKWYFMHRDLSPANI-FI--NSKGICKIADFGLARRYGYPPYSDTLSKDETMQR 186
Query: 187 -------VGSGFYIAPEVL--RRRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAI 237
V + +Y APE+L +Y +D+WS G I LL+G P F E + I
Sbjct: 187 REEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGE------NEI 240
Query: 238 LQ-GEIDF-----DTDPWPSI------------------------SSTAKDLVRRMLTKD 267
Q G I + D WP S A DL++ +L +
Sbjct: 241 DQLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLN 300
Query: 268 PKRRITAAQVLEHPW 282
P RI+A + L+H +
Sbjct: 301 PLERISAKEALKHEY 315
|
Length = 335 |
| >gnl|CDD|173679 cd05588, STKc_aPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C | Back alignment and domain information |
|---|
Score = 86.8 bits (215), Expect = 8e-19
Identities = 76/273 (27%), Positives = 122/273 (44%), Gaps = 24/273 (8%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVE 88
R++GRG + L T R YA K I K+ + D ++ E + S P +V
Sbjct: 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVG 60
Query: 89 FKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHR 148
S ++ E+ + V+E GGDL + + E A I A+N H G+++R
Sbjct: 61 LHSCFQTESRLFFVIEFVSGGDLMFHMQRQRKLPEEHARFYSAEISLALNFLHERGIIYR 120
Query: 149 DLKPENFSFISRDDNALLKVTDFGSALL-FEEGQVYRDIVGSGFYIAPEVLR-RRYGKEI 206
DLK +N + D +K+TD+G G G+ YIAPE+LR YG +
Sbjct: 121 DLKLDN---VLLDAEGHIKLTDYGMCKEGIRPGDTTSTFCGTPNYIAPEILRGEDYGFSV 177
Query: 207 DIWSAGVILYILLSGVPPF---------WAETKKGTYDAILQGEIDFDTDPWPSISSTAK 257
D W+ GV+++ +++G PF T+ + IL+ +I S+S A
Sbjct: 178 DWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEKQIRIPR----SLSVKAS 233
Query: 258 DLVRRMLTKDPKRRITA------AQVLEHPWLR 284
+++ L KDPK R+ + HP+ R
Sbjct: 234 SVLKGFLNKDPKERLGCHPQTGFRDIKSHPFFR 266
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions including proliferation, migration, apoptosis, polarity maintenance and cytoskeletal regulation. They also play a critical role in the regulation of glucose metabolism and in the pathogenesis of type 2 diabetes. Length = 329 |
| >gnl|CDD|143359 cd07854, STKc_MAPK4_6, Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6 | Back alignment and domain information |
|---|
Score = 87.1 bits (216), Expect = 9e-19
Identities = 86/314 (27%), Positives = 141/314 (44%), Gaps = 57/314 (18%)
Query: 14 LGKAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSI----AKKPKMRLAENDM 69
LG Y D+ R LG G G+ + ++ ++ A K I + K L E +
Sbjct: 3 LGSRYMDL-------RPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKI 55
Query: 70 IRR---EIQIRLY----LSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNS 122
IRR + +++Y SG + S E + V++V E E DL ++ +G S
Sbjct: 56 IRRLDHDNIVKVYEVLGPSGSDLTEDVGSLTELNS-VYIVQEYMET-DL-ANVLEQGPLS 112
Query: 123 ERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFE---- 178
E A + ++ + HS V+HRDLKP N FI+ +D +LK+ DFG A + +
Sbjct: 113 EEHARLFMYQLLRGLKYIHSANVLHRDLKPANV-FINTED-LVLKIGDFGLARIVDPHYS 170
Query: 179 -EGQVYRDIVGSGFYIAPEVL--RRRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYD 235
+G + +V + +Y +P +L Y K ID+W+AG I +L+G P F +
Sbjct: 171 HKGYLSEGLV-TKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQ 229
Query: 236 AILQG-----EIDFD----TDPW-----------------PSISSTAKDLVRRMLTKDPK 269
IL+ E D + P P ++ A D + ++LT +P
Sbjct: 230 LILESVPVVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPM 289
Query: 270 RRITAAQVLEHPWL 283
R+TA + L HP++
Sbjct: 290 DRLTAEEALMHPYM 303
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progression in certain conditions. It may also play a role in glucose-induced insulin secretion. MAPK6 and MAPK4 cooperate to regulate the activity of MAPK-activated protein kinase 5 (MK5), leading to its relocation to the cytoplasm and exclusion from the nucleus. The MAPK6/MK5 and MAPK4/MK5 pathways may play critical roles in embryonic and post-natal development. Length = 342 |
| >gnl|CDD|132960 cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Score = 85.6 bits (212), Expect = 9e-19
Identities = 67/275 (24%), Positives = 119/275 (43%), Gaps = 29/275 (10%)
Query: 28 GRMLGRGQFGVSYLCTENSTNRPYACK-------SIAKKPKMRLAENDMIRREIQIRLYL 80
G ++G+G +G YL +T A K + + +R EI+ L
Sbjct: 6 GELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDL 65
Query: 81 SGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVC 140
N+V++ E + + +E GG + + G E+ ++ +
Sbjct: 66 D-HLNIVQYLGFETTEEYLSIFLEYVPGGSIGSCLRTYGRFEEQLVRFFTEQVLEGLAYL 124
Query: 141 HSMGVMHRDLKPENFSFISRDDNALLKVTDFG----SALLFEEGQVYRDIVGSGFYIAPE 196
HS G++HRDLK +N + D + + K++DFG S +++ Q + GS F++APE
Sbjct: 125 HSKGILHRDLKADN---LLVDADGICKISDFGISKKSDDIYDNDQN-MSMQGSVFWMAPE 180
Query: 197 VL---RRRYGKEIDIWSAGVILYILLSGVPP------FWAETKKGTYDAILQGEIDFDTD 247
V+ + Y ++DIWS G ++ + +G P A K G + D
Sbjct: 181 VIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIAAMFKLGN----KRSAPPIPPD 236
Query: 248 PWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPW 282
++S A D + T +P R TA ++L+HP+
Sbjct: 237 VSMNLSPVALDFLNACFTINPDNRPTARELLQHPF 271
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell integrity MAPK pathway, which is activated by stresses and aggressions to the cell wall. The MAPKKK Bck1, MAPKKs Mkk1 and Mkk2, and the MAPK Slt2 make up the cascade that is important in the maintenance of cell wall homeostasis. Fission yeast Mkh1 is involved in MAPK cascades regulating cell morphology, cell wall integrity, salt resistance, and filamentous growth in response to stress. Length = 272 |
| >gnl|CDD|173745 cd07848, STKc_CDKL5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5 | Back alignment and domain information |
|---|
Score = 85.1 bits (210), Expect = 2e-18
Identities = 80/289 (27%), Positives = 124/289 (42%), Gaps = 48/289 (16%)
Query: 30 MLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIR----REIQIRLYLSGQPN 85
++G G +GV C T A K EN+ ++ RE+++ L Q N
Sbjct: 8 VVGEGAYGVVLKCRHKETKEIVAIKKFKDS-----EENEEVKETTLRELKMLRTLK-QEN 61
Query: 86 VVEFKSTYEDETAVHVVMELCEGG--DLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSM 143
+VE K + +++V E E +L + + G E+ + + + ++ A++ CH
Sbjct: 62 IVELKEAFRRRGKLYLVFEYVEKNMLELLEEM-PNGVPPEKVRSYIYQ-LIKAIHWCHKN 119
Query: 144 GVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQ--VYRDIVGSGFYIAPEVLR-R 200
++HRD+KPEN IS +D +LK+ DFG A EG Y + V + +Y +PE+L
Sbjct: 120 DIVHRDIKPENL-LISHND--VLKLCDFGFARNLSEGSNANYTEYVATRWYRSPELLLGA 176
Query: 201 RYGKEIDIWSAGVILYILLSGVP-------------------PFWAETKKGTYDAILQGE 241
YGK +D+WS G IL L G P P AE K Y
Sbjct: 177 PYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNPRFHG 236
Query: 242 IDFDTDPWPS---------ISSTAKDLVRRMLTKDPKRRITAAQVLEHP 281
+ F P +S DL++ +L +P R Q L HP
Sbjct: 237 LRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLNHP 285
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes cause a phenotype similar to Rett syndrome (RTT), a progressive neurodevelopmental disorder. These pathogenic mutations are located in the N-terminal portion of the protein within the kinase domain. Length = 287 |
| >gnl|CDD|173747 cd07852, STKc_MAPK15, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15 | Back alignment and domain information |
|---|
Score = 85.3 bits (212), Expect = 3e-18
Identities = 71/262 (27%), Positives = 111/262 (42%), Gaps = 64/262 (24%)
Query: 72 REIQIRLYLSGQPNVVEFKSTY--EDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATV 129
REI L PN+V+ + E++ +++V E E DL +I + +
Sbjct: 55 REIMFLQELGDHPNIVKLLNVIKAENDKDIYLVFEYMET-DL-HAVIRANILEDVHKRYI 112
Query: 130 LRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLF------EEGQVY 183
+ ++ A+ HS V+HRDLKP N I + + +K+ DFG A E V
Sbjct: 113 MYQLLKALKYIHSGNVIHRDLKPSN---ILLNSDCRVKLADFGLARSLSELEENPENPVL 169
Query: 184 RDIVGSGFYIAPEVL--RRRYGKEIDIWSAGVILYILLSGVPPF---------------- 225
D V + +Y APE+L RY K +D+WS G IL +L G P F
Sbjct: 170 TDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVI 229
Query: 226 --------------WAET--------KKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRM 263
+A T + D +L P S A DL++++
Sbjct: 230 GPPSAEDIESIKSPFAATMLDSLPSRPRKPLDELL-----------PKASDDALDLLKKL 278
Query: 264 LTKDPKRRITAAQVLEHPWLRE 285
L +P +R+TA + LEHP++ +
Sbjct: 279 LVFNPNKRLTAEEALEHPYVAQ 300
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimuli whereas ERK8 shows low basal activity and is activated by DNA-damaging agents. ERK7 and ERK8 also have different substrate profiles. Genome analysis shows that they are orthologs with similar gene structures. ERK7 and ERK 8 may be involved in the signaling of some nuclear receptor transcription factors. ERK7 regulates hormone-dependent degradation of estrogen receptor alpha while ERK8 down-regulates the transcriptional co-activation androgen and glucocorticoid receptors. Length = 337 |
| >gnl|CDD|173768 cd08228, STKc_Nek6, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6 | Back alignment and domain information |
|---|
Score = 83.9 bits (207), Expect = 4e-18
Identities = 72/259 (27%), Positives = 119/259 (45%), Gaps = 14/259 (5%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVE 88
+ +GRGQF Y T +P A K + M +EI + L+ PNV++
Sbjct: 8 KKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLN-HPNVIK 66
Query: 89 FKSTYEDETAVHVVMELCEGGDLFDRII----AKGYNSERDAATVLRAIVNAVNVCHSMG 144
+ ++ ++ +++V+EL + GDL I K ER + +AV HS
Sbjct: 67 YLDSFIEDNELNIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRR 126
Query: 145 VMHRDLKPENFSFISRDDNALLKVTDFGSALLF-EEGQVYRDIVGSGFYIAPEVLRRR-Y 202
VMHRD+KP N FI+ ++K+ D G F + +VG+ +Y++PE + Y
Sbjct: 127 VMHRDIKPANV-FITA--TGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGY 183
Query: 203 GKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPS--ISSTAKDLV 260
+ DIWS G +LY + + PF+ + K ++ Q D P P+ S ++LV
Sbjct: 184 NFKSDIWSLGCLLYEMAALQSPFYGD--KMNLFSLCQKIEQCDYPPLPTEHYSEKLRELV 241
Query: 261 RRMLTKDPKRRITAAQVLE 279
+ DP +R V +
Sbjct: 242 SMCIYPDPDQRPDIGYVHQ 260
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase and anaphase, and to the midbody during cytokinesis. Length = 267 |
| >gnl|CDD|173770 cd08528, STKc_Nek10, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10 | Back alignment and domain information |
|---|
Score = 83.3 bits (206), Expect = 6e-18
Identities = 68/261 (26%), Positives = 113/261 (43%), Gaps = 19/261 (7%)
Query: 31 LGRGQFGVSYLCTENSTNRPY-ACKSI-------AKKPKMRLAENDMIRREIQIRLYLSG 82
LG G FG Y + + + A K I K + R I E+ I
Sbjct: 8 LGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLR 67
Query: 83 QPNVVEFKSTYEDETAVHVVMELCEG---GDLFDRIIAKGYN-SERDAATVLRAIVNAVN 138
PN+V + T+ + +++VM+L EG G+ F+ + K +E + +V A+
Sbjct: 68 HPNIVRYYKTFLENDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALR 127
Query: 139 VCH-SMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEV 197
H ++HRDL P N D + +TDFG A + +VG+ Y PE+
Sbjct: 128 YLHKEKRIVHRDLTPNNIMLGEDDK---VTITDFGLAKQKQPESKLTSVVGTILYSCPEI 184
Query: 198 LRRR-YGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTA 256
++ YG++ D+W+ G ILY + + PPF++ I++ ++ P S
Sbjct: 185 VKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNMLSLATKIVEAV--YEPLPEGMYSEDV 242
Query: 257 KDLVRRMLTKDPKRRITAAQV 277
D++ LT D + R QV
Sbjct: 243 TDVITSCLTPDAEARPDIIQV 263
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. Length = 269 |
| >gnl|CDD|173769 cd08229, STKc_Nek7, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7 | Back alignment and domain information |
|---|
Score = 82.8 bits (204), Expect = 8e-18
Identities = 75/253 (29%), Positives = 122/253 (48%), Gaps = 18/253 (7%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRL-AENDMIRREIQIRLYLSGQPNVV 87
+ +GRGQF Y T P A K + M A D I+ EI + L+ PNV+
Sbjct: 8 KKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIK-EIDLLKQLN-HPNVI 65
Query: 88 EFKSTYEDETAVHVVMELCEGGDLFDRII-----AKGYNSERDAATVLRAIVNAVNVCHS 142
++ +++ ++ +++V+EL + GDL R+I K E+ + +A+ HS
Sbjct: 66 KYYASFIEDNELNIVLELADAGDL-SRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHS 124
Query: 143 MGVMHRDLKPENFSFISRDDNALLKVTDFGSALLF-EEGQVYRDIVGSGFYIAPEVLRRR 201
VMHRD+KP N FI+ ++K+ D G F + +VG+ +Y++PE +
Sbjct: 125 RRVMHRDIKPANV-FITA--TGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHEN 181
Query: 202 -YGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPS--ISSTAKD 258
Y + DIWS G +LY + + PF+ + K Y + E D P PS S +
Sbjct: 182 GYNFKSDIWSLGCLLYEMAALQSPFYGD-KMNLYSLCKKIE-QCDYPPLPSDHYSEELRQ 239
Query: 259 LVRRMLTKDPKRR 271
LV + DP++R
Sbjct: 240 LVNMCINPDPEKR 252
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. Length = 267 |
| >gnl|CDD|173748 cd07853, STKc_NLK, Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase | Back alignment and domain information |
|---|
Score = 84.0 bits (208), Expect = 1e-17
Identities = 86/305 (28%), Positives = 128/305 (41%), Gaps = 65/305 (21%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKM--RLAENDMIRREIQIRLY------L 80
R +G G FGV + T+ + A K K P + L + RE+++ + L
Sbjct: 6 RPIGYGAFGVVWSVTDPRDGKRVALK---KMPNVFQNLVSCKRVFRELKMLCFFKHDNVL 62
Query: 81 SG----QPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNA 136
S QP ++ +E+ ++VV EL + DL I++ S L I+
Sbjct: 63 SALDILQPPHIDP---FEE---IYVVTELMQS-DLHKIIVSPQPLSSDHVKVFLYQILRG 115
Query: 137 VNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALL--FEEGQVYRDIVGSGFYIA 194
+ HS G++HRD+KP N + + N +LK+ DFG A + +E + V + +Y A
Sbjct: 116 LKYLHSAGILHRDIKPGN---LLVNSNCVLKICDFGLARVEEPDESKHMTQEVVTQYYRA 172
Query: 195 PEVL--RRRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDP---- 248
PE+L R Y +DIWS G I LL F A++ D I D P
Sbjct: 173 PEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLI----TDLLGTPSLEA 228
Query: 249 ------------------WPSISST----------AKDLVRRMLTKDPKRRITAAQVLEH 280
PS+ A L+ RML DP +RI+AA L H
Sbjct: 229 MRSACEGARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAH 288
Query: 281 PWLRE 285
P+L E
Sbjct: 289 PYLDE 293
|
Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription factors from the TCF/LEF family, inhibiting their ability to activate the transcription of target genes. In prostate cancer cells, NLK is involved in regulating androgen receptor-mediated transcription and its expression is altered during cancer progression. Length = 372 |
| >gnl|CDD|132975 cd06644, STKc_STK10_LOK, Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase | Back alignment and domain information |
|---|
Score = 82.0 bits (202), Expect = 2e-17
Identities = 76/274 (27%), Positives = 121/274 (44%), Gaps = 38/274 (13%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFK 90
LG G FG Y T A K I K + L E+ M+ EI L P +V+
Sbjct: 20 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEEL-EDYMVEIEI---LATCNHPYIVKLL 75
Query: 91 STYEDETAVHVVMELCEGGDL------FDRIIAKGYNSERDAATVLRAIVNAVNVCHSMG 144
+ + + +++E C GG + DR + +E + R ++ A+ HSM
Sbjct: 76 GAFYWDGKLWIMIEFCPGGAVDAIMLELDRGL-----TEPQIQVICRQMLEALQYLHSMK 130
Query: 145 VMHRDLKPENFSFISRDDNALLKVTDFG-SALLFEEGQVYRDIVGSGFYIAPEVLR---- 199
++HRDLK N D +K+ DFG SA + Q +G+ +++APEV+
Sbjct: 131 IIHRDLKAGNVLLTLDGD---IKLADFGVSAKNVKTLQRRDSFIGTPYWMAPEVVMCETM 187
Query: 200 --RRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAK 257
Y + DIWS G+ L + PP I + ++P P++S +K
Sbjct: 188 KDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAK------SEP-PTLSQPSK 240
Query: 258 ------DLVRRMLTKDPKRRITAAQVLEHPWLRE 285
D ++ L K P+ R +AAQ+LEHP++
Sbjct: 241 WSMEFRDFLKTALDKHPETRPSAAQLLEHPFVSS 274
|
Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. Length = 292 |
| >gnl|CDD|132961 cd06630, STKc_MEKK1, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Score = 81.4 bits (201), Expect = 2e-17
Identities = 61/278 (21%), Positives = 120/278 (43%), Gaps = 27/278 (9%)
Query: 24 HYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDM---IRREIQIRLYL 80
+ G+ LG G F Y + T A K + + ++ +R+EI++ L
Sbjct: 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARL 60
Query: 81 SGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATV--LRAIVNAVN 138
+ P+++ +++ ++ +E GG + + Y + ++A + ++ ++
Sbjct: 61 N-HPHIIRMLGATCEDSHFNLFVEWMAGGSV--SHLLSKYGAFKEAVIINYTEQLLRGLS 117
Query: 139 VCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGF------- 191
H ++HRD+K N S L++ DFG+A ++ G+G
Sbjct: 118 YLHENQIIHRDVKGANLLIDSTGQR--LRIADFGAA-----ARLAAKGTGAGEFQGQLLG 170
Query: 192 ---YIAPEVLR-RRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTD 247
++APEVLR +YG+ D+WS G ++ + + PP+ AE I +
Sbjct: 171 TIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHLALIFKIASATTAP 230
Query: 248 PWPS-ISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLR 284
P +S +D+ R L P+ R + ++L+HP R
Sbjct: 231 SIPEHLSPGLRDVTLRCLELQPEDRPPSRELLKHPVFR 268
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their respective MAPKKs, MEK1/2 and MKK4/MKK7, respectively. MEKK1 is important in regulating cell survival and apoptosis. MEKK1 also plays a role in cell migration, tissue maintenance and homeostasis, and wound healing. Length = 268 |
| >gnl|CDD|173730 cd06624, STKc_ASK, Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase | Back alignment and domain information |
|---|
Score = 81.0 bits (200), Expect = 3e-17
Identities = 71/269 (26%), Positives = 120/269 (44%), Gaps = 30/269 (11%)
Query: 30 MLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEF 89
+LG+G +G+ Y + ST A K I P+ + EI + YL N+V++
Sbjct: 15 VLGKGTYGIVYAARDLSTQVRIAIKEI---PERDSRYVQPLHEEIALHSYLK-HRNIVQY 70
Query: 90 KSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVL---RAIVNAVNVCHSMGVM 146
+ + + ME GG L + +K + + T++ + I+ + H ++
Sbjct: 71 LGSDSENGFFKIFMEQVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDNQIV 130
Query: 147 HRDLKPENFSFISRDDNALLKVTDFG-SALLFEEGQVYRDIVGSGFYIAPEVL---RRRY 202
HRD+K +N + + ++K++DFG S L G+ Y+APEV+ R Y
Sbjct: 131 HRDIKGDNV--LVNTYSGVVKISDFGTSKRLAGINPCTETFTGTLQYMAPEVIDKGPRGY 188
Query: 203 GKEIDIWSAGVILYILLSGVPPFW-------AETKKGTYDAILQGEIDFDTDPWP-SISS 254
G DIWS G + + +G PPF A K G + P S+S+
Sbjct: 189 GAPADIWSLGCTIVEMATGKPPFIELGEPQAAMFKVGMFK---------IHPEIPESLSA 239
Query: 255 TAKDLVRRMLTKDPKRRITAAQVLEHPWL 283
AK+ + R DP +R +A +L+ P+L
Sbjct: 240 EAKNFILRCFEPDPDKRASAHDLLQDPFL 268
|
Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. It plays important roles in cytokine and stress responses, as well as in reactive oxygen species (ROS)-mediated cellular responses. ASK1 is implicated in various diseases mediated by oxidative stress including inschemic heart disease, hypertension, vessel injury, brain ischemia, Fanconi anemia, asthma, and pulmonary edema, among others. ASK2 (also called MAPKKK6) functions only in a heteromeric complex with ASK1, and can activate ASK1 by direct phosphorylation. The function of MAPKKK15 is still unknown. Length = 268 |
| >gnl|CDD|132977 cd06646, STKc_MAP4K5, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5 | Back alignment and domain information |
|---|
Score = 79.3 bits (195), Expect = 1e-16
Identities = 78/262 (29%), Positives = 114/262 (43%), Gaps = 25/262 (9%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFK 90
+G G +G Y T A K I +P + +I++EI + N+V +
Sbjct: 17 VGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFS---LIQQEI-FMVKECKHCNIVAYF 72
Query: 91 STYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDL 150
+Y + + ME C GG L D G SE A V R + + HS G MHRD+
Sbjct: 73 GSYLSREKLWICMEYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLAYLHSKGKMHRDI 132
Query: 151 KPENFSFISRDDNALLKVTDFGSALLFEEGQVYR-DIVGSGFYIAPEVLRRR----YGKE 205
K N I DN +K+ DFG A R +G+ +++APEV Y +
Sbjct: 133 KGAN---ILLTDNGDVKLADFGVAAKITATIAKRKSFIGTPYWMAPEVAAVEKNGGYNQL 189
Query: 206 IDIWSAGVILYILLSGVPP-FWAETKKGTYDAILQGEIDF------DTDPWPSISSTAKD 258
DIW+ G+ L PP F + + L + +F D W SST +
Sbjct: 190 CDIWAVGITAIELAELQPPMFDLHPMRALF---LMSKSNFQPPKLKDKTKW---SSTFHN 243
Query: 259 LVRRMLTKDPKRRITAAQVLEH 280
V+ LTK+PK+R TA ++L H
Sbjct: 244 FVKISLTKNPKKRPTAERLLTH 265
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). MAP4K5 also facilitates Wnt signaling in B cells, and may therefore be implicated in the control of cell fate, proliferation, and polarity. Length = 267 |
| >gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Score = 79.8 bits (197), Expect = 1e-16
Identities = 57/212 (26%), Positives = 90/212 (42%), Gaps = 24/212 (11%)
Query: 24 HYFFGRMLGRGQFGVSYLCT-ENSTNRPYACKSIAKKPKMRLAENDM--IRREIQI--RL 78
H F + LG G FG LC + + ++ K E REI+I L
Sbjct: 5 HLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAV-KSLNHSGEEQHRSDFEREIEILRTL 63
Query: 79 YLSGQPNVVEFKSTYED--ETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLR---AI 133
N+V++K E ++ ++ME G L R + + + + +L I
Sbjct: 64 D---HENIVKYKGVCEKPGGRSLRLIMEYLPSGSL--RDYLQRHRDQINLKRLLLFSSQI 118
Query: 134 VNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSG--- 190
++ S +HRDL N I + L+K++DFG A + E + Y + G
Sbjct: 119 CKGMDYLGSQRYIHRDLAARN---ILVESEDLVKISDFGLAKVLPEDKDYYYVKEPGESP 175
Query: 191 -FYIAPEVLR-RRYGKEIDIWSAGVILYILLS 220
F+ APE LR ++ D+WS GV LY L +
Sbjct: 176 IFWYAPECLRTSKFSSASDVWSFGVTLYELFT 207
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284 |
| >gnl|CDD|143342 cd07837, STKc_CdkB_plant, Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase | Back alignment and domain information |
|---|
Score = 79.5 bits (196), Expect = 2e-16
Identities = 80/295 (27%), Positives = 122/295 (41%), Gaps = 53/295 (17%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAEND-----MIRREIQIRLYLSGQPN 85
+G G +G Y + +T + A K K RL ++ REI + LS
Sbjct: 9 IGEGTYGKVYKARDKNTGKLVALK------KTRLEMDEEGIPPTALREISLLQMLSESIY 62
Query: 86 VVEF---KSTYED--ETAVHVVMELCEGGDLFDRIIAKGYNSER--DAATVLR---AIVN 135
+V + E + ++++V E + DL + + G R A T+ ++
Sbjct: 63 IVRLLDVEHVEEKNGKPSLYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLK 121
Query: 136 AVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFE--EGQVYRDIVGSGFYI 193
V CH GVMHRDLKP+N + LLK+ D G F +IV + +Y
Sbjct: 122 GVAHCHKHGVMHRDLKPQN--LLVDKQKGLLKIADLGLGRAFSIPVKSYTHEIV-TLWYR 178
Query: 194 APEVL--RRRYGKEIDIWSAGVILYILLSGVPPFWAETK----------KGTYDAILQGE 241
APEVL Y +DIWS G I + P F +++ GT +
Sbjct: 179 APEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIFKLLGTPTEQVWPG 238
Query: 242 I----DFDTDP-W---------PSISSTAKDLVRRMLTKDPKRRITAAQVLEHPW 282
+ D+ P W P +S DL+++ML DP +RI+A L HP+
Sbjct: 239 VSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALTHPY 293
|
Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developmental pathways, such as stomata and leaf development. CdkB has been shown to associate with both cyclin B, which controls G2/M transition, and cyclin D, which acts as a mediator in linking extracellular signals to the cell cycle. Length = 295 |
| >gnl|CDD|173751 cd07860, STKc_CDK2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3 | Back alignment and domain information |
|---|
Score = 79.1 bits (195), Expect = 2e-16
Identities = 81/297 (27%), Positives = 117/297 (39%), Gaps = 66/297 (22%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFK 90
+G G +GV Y T A K I + + IR EI + L+ PN+V+
Sbjct: 8 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELN-HPNIVKLL 65
Query: 91 STYEDETAVHVVMELCEGGDL--FDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHR 148
E +++V E DL F + L ++ + CHS V+HR
Sbjct: 66 DVIHTENKLYLVFEFLHQ-DLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHRVLHR 124
Query: 149 DLKPENFSFISRDDNALLKVTDFGSALLFEEG---QVYRDIVGSGFYIAPEVLR--RRYG 203
DLKP+N + +K+ DFG A F G + Y V + +Y APE+L + Y
Sbjct: 125 DLKPQNLLI---NTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPEILLGCKYYS 179
Query: 204 KEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQG--EID--F---------DTDPWP 250
+DIWS G I +AE T A+ G EID F D WP
Sbjct: 180 TAVDIWSLGCI-----------FAEMV--TRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 226
Query: 251 SISS-------------------------TAKDLVRRMLTKDPKRRITAAQVLEHPW 282
++S +DL+ +ML DP +RI+A L HP+
Sbjct: 227 GVTSLPDYKPSFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALAHPF 283
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. CDK2, together with CDK4, also regulates embryonic cell proliferation. Despite these important roles, mice deleted for the cdk2 gene are viable and normal except for being sterile. This may be due to compensation provided by CDK1 (also called Cdc2), which can also bind cyclin E and drive the G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 284 |
| >gnl|CDD|173754 cd07865, STKc_CDK9, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9 | Back alignment and domain information |
|---|
Score = 79.3 bits (196), Expect = 3e-16
Identities = 79/302 (26%), Positives = 124/302 (41%), Gaps = 62/302 (20%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAEND------MIRREIQIRLYLSGQP 84
+G+G FG + T + A K + L EN+ REI+I L L
Sbjct: 20 IGQGTFGEVFKARHKKTKQIVALKKV-------LMENEKEGFPITALREIKI-LQLLKHE 71
Query: 85 NVVEF------KSTYE--DETAVHVVMELCEGGDLFDRIIAKGYN-SERDAATVLRAIVN 135
NVV K+T + + ++V E CE DL + K + + V++ ++N
Sbjct: 72 NVVNLIEICRTKATPYNRYKGSFYLVFEFCEH-DLAGLLSNKNVKFTLSEIKKVMKMLLN 130
Query: 136 AVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLF-----EEGQVYRDIVGSG 190
+ H ++HRD+K N I++D +LK+ DFG A F + Y + V +
Sbjct: 131 GLYYIHRNKILHRDMKAANI-LITKD--GILKLADFGLARAFSLSKNSKPNRYTNRVVTL 187
Query: 191 FYIAPEVL--RRRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQ--GEIDFDT 246
+Y PE+L R YG ID+W AG I+ + + P T++ I Q G I +
Sbjct: 188 WYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLCGSITPEV 247
Query: 247 DP-------------------------WPSISS-TAKDLVRRMLTKDPKRRITAAQVLEH 280
P P + A DL+ ++L DP +RI A L H
Sbjct: 248 WPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALNH 307
Query: 281 PW 282
+
Sbjct: 308 DF 309
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multiple steps of gene expression including transcription elongation, mRNA synthesis, processing, export, and translation. It also plays a role in mediating cytokine induced transcription networks such as IL6-induced STAT3 signaling. In addition, the CDK9/cyclin T2a complex promotes muscle differentiation and enhances the function of some myogenic regulatory factors. Length = 310 |
| >gnl|CDD|143368 cd07863, STKc_CDK4, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4 | Back alignment and domain information |
|---|
Score = 78.9 bits (194), Expect = 3e-16
Identities = 78/292 (26%), Positives = 129/292 (44%), Gaps = 50/292 (17%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDM---IRREIQI--RLYLSGQPN 85
+G G +G Y + + A KS+ +++ E+ + RE+ + RL PN
Sbjct: 8 IGVGAYGTVYKARDPHSGHFVALKSV----RVQTNEDGLPLSTVREVALLKRLEAFDHPN 63
Query: 86 VVEF-----KSTYEDETAVHVVMELCEGGDL---FDRIIAKGYNSE--RDAATVLRAIVN 135
+V S + ET V +V E + DL D++ G +E +D ++R +
Sbjct: 64 IVRLMDVCATSRTDRETKVTLVFEHVDQ-DLRTYLDKVPPPGLPAETIKD---LMRQFLR 119
Query: 136 AVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAP 195
++ H+ ++HRDLKPEN S +K+ DFG A ++ +V + +Y AP
Sbjct: 120 GLDFLHANCIVHRDLKPENILVTSG---GQVKLADFGLARIYSCQMALTPVVVTLWYRAP 176
Query: 196 EVL-RRRYGKEIDIWSAGVILYILLSGVPPFWAETKKGT----YDAI-LQGEIDFDTD-- 247
EVL + Y +D+WS G I + P F ++ +D I L E D+ D
Sbjct: 177 EVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVT 236
Query: 248 -------PW---------PSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWL 283
P P I + L+ MLT +P +RI+A + L+HP+
Sbjct: 237 LPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQHPFF 288
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the nucleus. CDK4 also shows kinase activity towards Smad3, a signal transducer of transforming growth factor (TGF)-beta signaling which modulates transcription and plays a role in cell proliferation and apoptosis. CDK4 is inhibited by the p21 inhibitor and is specifically mutated in human melanoma. Length = 288 |
| >gnl|CDD|132974 cd06643, STKc_SLK, Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase | Back alignment and domain information |
|---|
Score = 78.1 bits (192), Expect = 5e-16
Identities = 77/264 (29%), Positives = 118/264 (44%), Gaps = 22/264 (8%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFK 90
LG G FG Y T A K I K + L E+ M+ EI I L PN+V+
Sbjct: 13 LGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEEL-EDYMV--EIDI-LASCDHPNIVKLL 68
Query: 91 STYEDETAVHVVMELCEGGDLFDRIIAKGYN--SERDAATVLRAIVNAVNVCHSMGVMHR 148
+ E + +++E C GG + D ++ + +E V + + A+N H ++HR
Sbjct: 69 DAFYYENNLWILIEFCAGGAV-DAVMLELERPLTEPQIRVVCKQTLEALNYLHENKIIHR 127
Query: 149 DLKPENFSFISRDDNALLKVTDFG-SALLFEEGQVYRDIVGSGFYIAPEVLR------RR 201
DLK N F D +K+ DFG SA Q +G+ +++APEV+ R
Sbjct: 128 DLKAGNILFTLDGD---IKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRP 184
Query: 202 YGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDP--WPSISSTAKDL 259
Y + D+WS G+ L + PP I + E P W SS KD
Sbjct: 185 YDYKADVWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTLAQPSRW---SSEFKDF 241
Query: 260 VRRMLTKDPKRRITAAQVLEHPWL 283
+++ L K+ R T Q+L+HP++
Sbjct: 242 LKKCLEKNVDARWTTTQLLQHPFV 265
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. Length = 282 |
| >gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 77.2 bits (191), Expect = 6e-16
Identities = 62/270 (22%), Positives = 112/270 (41%), Gaps = 28/270 (10%)
Query: 29 RMLGRGQFGVSYLCT---ENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPN 85
+ LG G FG Y ++ A K++ K E +E ++ + G PN
Sbjct: 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTL--KEDASEEERKDFLKEARV-MKKLGHPN 57
Query: 86 VVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKG---YNSERDAATVLRAIVNAVNVC-- 140
VV +E +++V+E EGGDL D + + E+ ++ + A+ +
Sbjct: 58 VVRLLGVCTEEEPLYLVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKG 117
Query: 141 ----HSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYI--- 193
S +HRDL N + D K++DFG + + YR G I
Sbjct: 118 MEYLASKKFVHRDLAARNC-LVGEDLVV--KISDFGLSRDVYDDDYYRKKTGGKLPIRWM 174
Query: 194 APEVLR-RRYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQGE-IDFDTDPWP 250
APE L+ + + D+WS GV+L+ + + G P+ + + + + +G + P
Sbjct: 175 APESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNEEVLEYLRKGYRLPK---P-E 230
Query: 251 SISSTAKDLVRRMLTKDPKRRITAAQVLEH 280
+L+ DP+ R T ++++E
Sbjct: 231 YCPDELYELMLSCWQLDPEDRPTFSELVER 260
|
Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262 |
| >gnl|CDD|143344 cd07839, STKc_CDK5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5 | Back alignment and domain information |
|---|
Score = 76.3 bits (188), Expect = 2e-15
Identities = 79/294 (26%), Positives = 123/294 (41%), Gaps = 60/294 (20%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAEND-----MIRREIQIRLYLSGQPN 85
+G G +G + T+ A K ++RL ++D REI + L N
Sbjct: 8 IGEGTYGTVFKAKNRETHEIVALK------RVRLDDDDEGVPSSALREICLLKELK-HKN 60
Query: 86 VVEFKSTYEDETAVHVVMELCEGGDL---FDRIIAKGYNSERDAATV---LRAIVNAVNV 139
+V + + +V E C+ DL FD N + D V + ++ +
Sbjct: 61 IVRLYDVLHSDKKLTLVFEYCDQ-DLKKYFDSC-----NGDIDPEIVKSFMFQLLKGLAF 114
Query: 140 CHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEG---QVYRDIVGSGFYIAPE 196
CHS V+HRDLKP+N + + N LK+ DFG A F G + Y V + +Y P+
Sbjct: 115 CHSHNVLHRDLKPQN---LLINKNGELKLADFGLARAF--GIPVRCYSAEVVTLWYRPPD 169
Query: 197 VL--RRRYGKEIDIWSAGVILYILL-SGVPPFWAETKKGTYDAILQGEIDFDTDPWPSIS 253
VL + Y ID+WSAG I L +G P F I + + WP +S
Sbjct: 170 VLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVS 229
Query: 254 -------------------------STAKDLVRRMLTKDPKRRITAAQVLEHPW 282
ST +DL++ +L +P +RI+A + L+HP+
Sbjct: 230 KLPDYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQHPY 283
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also important in synaptic plasticity and learning. CDK5 also participates in protecting against cell death and promoting angiogenesis. Impaired CDK5 activity is implicated in Alzheimer's disease, amyotrophic lateral sclerosis, Parkinson's disease, Huntington's disease and acute neuronal injury. Length = 284 |
| >gnl|CDD|143371 cd07866, STKc_BUR1, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins | Back alignment and domain information |
|---|
Score = 76.6 bits (189), Expect = 2e-15
Identities = 77/322 (23%), Positives = 122/322 (37%), Gaps = 83/322 (25%)
Query: 24 HYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMI----RREIQIRLY 79
Y LG G FG Y + T R A K I + E D REI+I L
Sbjct: 9 DYEILGKLGEGTFGEVYKARQIKTGRVVALKKI-----LMHNEKDGFPITALREIKI-LK 62
Query: 80 LSGQPNVVEF--------KSTYEDETAVHVVM-----ELCEGGDLFDRIIAKGYNSERDA 126
PNVV + +V++V +L G L + + +E
Sbjct: 63 KLKHPNVVPLIDMAVERPDKSKRKRGSVYMVTPYMDHDLS--GLLENPSVKL---TESQI 117
Query: 127 ATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEE------- 179
+ ++ +N H ++HRD+K N I D+ +LK+ DFG A ++
Sbjct: 118 KCYMLQLLEGINYLHENHILHRDIKAAN---ILIDNQGILKIADFGLARPYDGPPPNPKG 174
Query: 180 -----GQVYRDIVGSGFYIAPEVL--RRRYGKEIDIWSAGVILYILLSGVPPFWAETKKG 232
+ Y ++V + +Y PE+L RRY +DIW G + + + P +G
Sbjct: 175 GGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPIL-----QG 229
Query: 233 TYDAILQGEIDFD------TDPWP--------------------------SISSTAKDLV 260
D I Q + F + WP + DL+
Sbjct: 230 KSD-IDQLHLIFKLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLL 288
Query: 261 RRMLTKDPKRRITAAQVLEHPW 282
++L+ DP +R+TA+ LEHP+
Sbjct: 289 SKLLSLDPYKRLTASDALEHPY 310
|
Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic screen as factors involved in general transcription. The BUR1/BUR2 complex phosphorylates the C-terminal domain of RNA polymerase II. In addition, this complex regulates histone modification by phosporylating Rad6 and mediating the association of the Paf1 complex with chromatin. Length = 311 |
| >gnl|CDD|234389 TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclase fusion protein | Back alignment and domain information |
|---|
Score = 78.7 bits (194), Expect = 2e-15
Identities = 59/225 (26%), Positives = 99/225 (44%), Gaps = 27/225 (12%)
Query: 71 RREIQI--RLYLSGQPNVVEFKSTYEDETA-VHVVMELCEGGDLFDRIIAKGYNSERDAA 127
RRE + RLY PN+V + E + V E G L + + A G +
Sbjct: 26 RRETALCARLY---HPNIVALLDSGEAPPGLLFAVFEYVPGRTLREVLAADGALPAGETG 82
Query: 128 TVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFG-SALL--FEEGQVYR 184
++ +++A+ H+ G++HRDLKP+N KV DFG LL + V
Sbjct: 83 RLMLQVLDALACAHNQGIVHRDLKPQNIMVSQTGVRPHAKVLDFGIGTLLPGVRDADVAT 142
Query: 185 -----DIVGSGFYIAPEVLRRRYGKEI----DIWSAGVILYILLSGVPPFWAETKKGTYD 235
+++G+ Y APE LR G+ + D+++ G+I L+G + +
Sbjct: 143 LTRTTEVLGTPTYCAPEQLR---GEPVTPNSDLYAWGLIFLECLTGQRVVQGAS---VAE 196
Query: 236 AILQ--GEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVL 278
+ Q +D PW + ++R+ L KDP++R +A L
Sbjct: 197 ILYQQLSPVDVSLPPWIA-GHPLGQVLRKALNKDPRQRAASAPAL 240
|
This model represents proteins of 1350 in length, in multiple species of Burkholderia, in Acidovorax avenae subsp. citrulli AAC00-1 and Delftia acidovorans SPH-1, and in multiple copies in Sorangium cellulosum, in genomic neighborhoods that include a cyclodehydratase/docking scaffold fusion protein (TIGR03882) and a member of the thiazole/oxazole modified metabolite (TOMM) precursor family TIGR03795. It has a kinase domain in the N-terminal 300 amino acids, followed by a cyclase homology domain, followed by regions without named domain definitions. It is a probable bacteriocin-like metabolite biosynthesis protein [Cellular processes, Toxin production and resistance]. Length = 1266 |
| >gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase | Back alignment and domain information |
|---|
Score = 75.2 bits (186), Expect = 2e-15
Identities = 63/274 (22%), Positives = 112/274 (40%), Gaps = 39/274 (14%)
Query: 27 FGRMLGRGQFGVSYLCT----ENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSG 82
G+ LG G FG Y T T A K++ K E + E I LS
Sbjct: 3 LGKKLGEGAFGEVYKGTLKGDGEGTETKVAVKTL--KEGASEEEREEFLEEASIMKKLS- 59
Query: 83 QPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVC-- 140
PN+V +++V E GGDL D + + T+ + A+ +
Sbjct: 60 HPNIVRLLGVCTQGEPLYIVTEYMPGGDLLDFLRKH-----GEKLTLKDLLQMALQIAKG 114
Query: 141 ----HSMGVMHRDLKPENFSFISR----DDNALLKVTDFGSALLFEEGQVYRDIVGSGF- 191
S +HRDL +R +N ++K++DFG + E YR G
Sbjct: 115 MEYLESKNFVHRDLA-------ARNCLVTENLVVKISDFGLSRDIYEDDYYRKRGGGKLP 167
Query: 192 --YIAPEVLR-RRYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQGE-IDFDT 246
++APE L+ ++ + D+WS GV+L+ + + G P+ + + + + G +
Sbjct: 168 IKWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGEQPYPGMSNEEVLELLEDGYRLPRPE 227
Query: 247 DPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEH 280
+ + +L+ + DP+ R T ++++E
Sbjct: 228 NCPDEL----YELMLQCWAYDPEDRPTFSELVED 257
|
Length = 258 |
| >gnl|CDD|132950 cd06619, PKc_MKK5, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5 | Back alignment and domain information |
|---|
Score = 75.7 bits (186), Expect = 3e-15
Identities = 69/273 (25%), Positives = 115/273 (42%), Gaps = 25/273 (9%)
Query: 30 MLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEF 89
+LG G G Y T R A K I + L + M EI LY P ++ F
Sbjct: 8 ILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEI---LYKCDSPYIIGF 64
Query: 90 KSTYEDETAVHVVMELCEGG--DLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMH 147
+ E + + E +GG D++ +I E + A+V + S+ ++H
Sbjct: 65 YGAFFVENRISICTEFMDGGSLDVYRKI------PEHVLGRIAVAVVKGLTYLWSLKILH 118
Query: 148 RDLKPENFSFISRDDNALLKVTDFG--SALLFEEGQVYRDIVGSGFYIAPE-VLRRRYGK 204
RD+KP N +R +K+ DFG + L+ + Y VG+ Y+APE + +YG
Sbjct: 119 RDVKPSNMLVNTRGQ---VKLCDFGVSTQLVNSIAKTY---VGTNAYMAPERISGEQYGI 172
Query: 205 EIDIWSAGVILYILLSGVPPFWAETKKGTY---DAILQGEIDFDTDPWP--SISSTAKDL 259
D+WS G+ L G P+ K +LQ +D D P S
Sbjct: 173 HSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDEDPPVLPVGQFSEKFVHF 232
Query: 260 VRRMLTKDPKRRITAAQVLEHPWLRESGEASDD 292
+ + + K PK R +++HP++ + + + +
Sbjct: 233 ITQCMRKQPKERPAPENLMDHPFIVQYNDGNAE 265
|
Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that phosphorylates its downstream target, extracellular signal-regulated kinase 5 (ERK5), on specific threonine and tyrosine residues. MKK5 is activated by MEKK2 and MEKK3 in response to mitogenic and stress stimuli. The ERK5 cascade promotes cell proliferation, differentiation, neuronal survival, and neuroprotection. This cascade plays an essential role in heart development. Mice deficient in either ERK5 or MKK5 die around embryonic day 10 due to cardiovascular defects including underdevelopment of the myocardium. In addition, MKK5 is associated with metastasis and unfavorable prognosis in prostate cancer. Length = 279 |
| >gnl|CDD|132949 cd06618, PKc_MKK7, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7 | Back alignment and domain information |
|---|
Score = 74.7 bits (184), Expect = 6e-15
Identities = 69/265 (26%), Positives = 112/265 (42%), Gaps = 21/265 (7%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFK 90
+G G G Y T A K + + EN I ++ + L P +V+
Sbjct: 23 IGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKE--ENKRILMDLDVVLKSHDCPYIVKCY 80
Query: 91 STYEDETAVHVVMELCEGGDLFDRIIAKGYN--SERDAATVLRAIVNAVN---VCHSMGV 145
+ ++ V + MEL D+++ + E + AIV A++ H GV
Sbjct: 81 GYFITDSDVFICMELM--STCLDKLLKRIQGPIPEDILGKMTVAIVKALHYLKEKH--GV 136
Query: 146 MHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVL-----RR 200
+HRD+KP N I D + +K+ DFG + + + G Y+APE +
Sbjct: 137 IHRDVKPSN---ILLDASGNVKLCDFGISGRLVDSKAKTRSAGCAAYMAPERIDPPDPNP 193
Query: 201 RYGKEIDIWSAGVILYILLSGVPPF-WAETKKGTYDAILQGEIDFDTDPWPSISSTAKDL 259
+Y D+WS G+ L L +G P+ +T+ ILQ E P S
Sbjct: 194 KYDIRADVWSLGISLVELATGQFPYKNCKTEFEVLTKILQEEPP-SLPPNEGFSPDFCSF 252
Query: 260 VRRMLTKDPKRRITAAQVLEHPWLR 284
V LTKD ++R ++L+HP++R
Sbjct: 253 VDLCLTKDHRKRPKYRELLQHPFIR 277
|
Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates its downstream target, c-Jun N-terminal kinase (JNK), on specific threonine and tyrosine residues. Although MKK7 is capable of dual phosphorylation, it prefers to phosphorylate the threonine residue of JNK. Thus, optimal activation of JNK requires both MKK4 (not included in this subfamily) and MKK7. MKK7 is primarily activated by cytokines. MKK7 is essential for liver formation during embryogenesis. It plays roles in G2/M cell cycle arrest and cell growth. In addition, it is involved in the control of programmed cell death, which is crucial in oncogenesis, cancer chemoresistance, and antagonism to TNFalpha-induced killing, through its inhibition by Gadd45beta and the subsequent suppression of the JNK cascade. Length = 296 |
| >gnl|CDD|132951 cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Score = 73.7 bits (181), Expect = 1e-14
Identities = 78/284 (27%), Positives = 117/284 (41%), Gaps = 38/284 (13%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKS--IAKKPKMRLAENDMIRREIQIRLYLSGQPNV 86
LG G G T A K I K +R I RE+QI ++ P +
Sbjct: 11 SDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVR----KQILRELQI-MHECRSPYI 65
Query: 87 VEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERD-----AATVLRAIVNAVNVCH 141
V F + +E + + ME + G L DRI KG + A V+ + NV
Sbjct: 66 VSFYGAFLNENNICMCMEFMDCGSL-DRIYKKGGPIPVEILGKIAVAVVEGLTYLYNVHR 124
Query: 142 SMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDI----VGSGFYIAPEV 197
+MHRD+KP N SR +K+ DFG + G++ I VG+ Y++PE
Sbjct: 125 ---IMHRDIKPSNILVNSRGQ---IKLCDFGVS-----GELINSIADTFVGTSTYMSPER 173
Query: 198 LR-RRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDF----DTDPWPSI 252
++ +Y + D+WS G+ + L G PF G +D +P P +
Sbjct: 174 IQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQEPPPRL 233
Query: 253 SST-----AKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASD 291
S+ +D V L KDP R T Q+ P ++ AS+
Sbjct: 234 PSSDFPEDLRDFVDACLLKDPTERPTPQQLCAMPPFIQALRASN 277
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Byr1 from Schizosaccharomyces pombe, FUZ7 from Ustilago maydis, and related proteins. Byr1 phosphorylates its downstream target, the MAPK Spk1, and is regulated by the MAPKKK Byr2. The Spk1 cascade is pheromone-responsive and is essential for sporulation and sexual differentiation in fission yeast. FUZ7 phosphorylates and activates its target, the MAPK Crk1, which is required in mating and virulence in U. maydis. Length = 284 |
| >gnl|CDD|143381 cd07876, STKc_JNK2, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2 | Back alignment and domain information |
|---|
Score = 73.9 bits (181), Expect = 2e-14
Identities = 74/275 (26%), Positives = 117/275 (42%), Gaps = 52/275 (18%)
Query: 49 RPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVVMELCEG 108
RP+ ++ AK+ L + + I L NV + + E+ V++VMEL +
Sbjct: 56 RPFQNQTHAKRAYRELVLLKCVNHKNIISLL-----NVFTPQKSLEEFQDVYLVMELMDA 110
Query: 109 GDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKV 168
++I + ER + +L ++ + HS G++HRDLKP N I + LK+
Sbjct: 111 N--LCQVIHMELDHER-MSYLLYQMLCGIKHLHSAGIIHRDLKPSN---IVVKSDCTLKI 164
Query: 169 TDFGSALLFEEGQVYRDIVGSGFYIAPEV-LRRRYGKEIDIWSAGVILYILLSGVPPF-- 225
DFG A + V + +Y APEV L Y + +DIWS G I+ L+ G F
Sbjct: 165 LDFGLARTACTNFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQG 224
Query: 226 ------WAET------------------------KKGTYDAILQGEIDFDTDPWPSIS-- 253
W + + Y I E+ F +PS S
Sbjct: 225 TDHIDQWNKVIEQLGTPSAEFMNRLQPTVRNYVENRPQYPGISFEEL-FPDWIFPSESER 283
Query: 254 -----STAKDLVRRMLTKDPKRRITAAQVLEHPWL 283
S A+DL+ +ML DP +RI+ + L HP++
Sbjct: 284 DKLKTSQARDLLSKMLVIDPDKRISVDEALRHPYI 318
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK2 is specifically translocated to the mitochondria during dopaminergic cell death. Specific substrates include the microtubule-associated proteins DCX and Tau, as well as TIF-IA which is involved in ribosomal RNA synthesis regulation. Mice deficient in Jnk2 show protection against arthritis, type 1 diabetes, atherosclerosis, abdominal aortic aneurysm, cardiac cell death, TNF-induced liver damage, and tumor growth, indicating that JNK2 may play roles in the pathogenesis of these diseases. Length = 359 |
| >gnl|CDD|132969 cd06638, STKc_myosinIIIA, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin | Back alignment and domain information |
|---|
Score = 72.4 bits (177), Expect = 3e-14
Identities = 65/241 (26%), Positives = 108/241 (44%), Gaps = 36/241 (14%)
Query: 67 NDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVH-----VVMELCEGGDLFDRIIAKGY- 120
++ I E I LS PNVV+F Y + + +V+ELC GG + D + KG+
Sbjct: 58 DEEIEAEYNILKALSDHPNVVKFYGMYYKKDVKNGDQLWLVLELCNGGSVTD--LVKGFL 115
Query: 121 -----NSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSAL 175
E A +L + + H +HRD+K N + +K+ DFG +
Sbjct: 116 KRGERMEEPIIAYILHEALMGLQHLHVNKTIHRDVKGNNILLTTEGG---VKLVDFGVSA 172
Query: 176 LFEEGQVYRDI-VGSGFYIAPEV------LRRRYGKEIDIWSAGVILYILLSGVPPFWAE 228
++ R+ VG+ F++APEV L Y D+WS G+ L G PP A+
Sbjct: 173 QLTSTRLRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPL-AD 231
Query: 229 TKKGTYDAILQGEIDFDTDPWPSI------SSTAKDLVRRMLTKDPKRRITAAQVLEHPW 282
++ +P P++ S+ D +R+ LTKD ++R T + +L+H +
Sbjct: 232 LHP------MRALFKIPRNPPPTLHQPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQHVF 285
Query: 283 L 283
+
Sbjct: 286 I 286
|
Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear hair cells. It is localized to the distal ends of actin-bundled structures. Mutations in human myosin IIIA are responsible for progressive nonsyndromic hearing loss. Human myosin IIIA possesses ATPase and kinase activities, and the ability to move actin filaments in a motility assay. It may function as a cellular transporter capable of moving along actin bundles in sensory cells. Length = 286 |
| >gnl|CDD|183880 PRK13184, pknD, serine/threonine-protein kinase; Reviewed | Back alignment and domain information |
|---|
Score = 73.3 bits (180), Expect = 1e-13
Identities = 74/292 (25%), Positives = 117/292 (40%), Gaps = 44/292 (15%)
Query: 22 MLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIR----REIQIR 77
M Y R++G+G G YL + +R A K I + L+EN +++ RE +I
Sbjct: 1 MQRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIRED----LSENPLLKKRFLREAKIA 56
Query: 78 LYLSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFD--------RIIAKGYNSERDAATV 129
L P +V S D V+ M EG L ++K +
Sbjct: 57 ADLI-HPGIVPVYSICSDGDPVYYTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAF 115
Query: 130 LR---AIVNAVNVCHSMGVMHRDLKPEN------------------FSFISRDDNALLKV 168
L I + HS GV+HRDLKP+N F + +D + V
Sbjct: 116 LSIFHKICATIEYVHSKGVLHRDLKPDNILLGLFGEVVILDWGAAIFKKLEEEDLLDIDV 175
Query: 169 TDFGSALLFEEGQVYRDIVGSGFYIAPEVLRRRYGKE-IDIWSAGVILYILLSGVPPFWA 227
+ + + IVG+ Y+APE L E DI++ GVILY +L+ P+
Sbjct: 176 DERNI--CYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRR 233
Query: 228 ET-KKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVL 278
+ +K +Y ++ I + P+ I + + L DP R ++ Q L
Sbjct: 234 KKGRKISYRDVILSPI--EVAPYREIPPFLSQIAMKALAVDPAERYSSVQEL 283
|
Length = 932 |
| >gnl|CDD|173502 PTZ00266, PTZ00266, NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 72.5 bits (177), Expect = 2e-13
Identities = 73/292 (25%), Positives = 129/292 (44%), Gaps = 41/292 (14%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVE 88
+ +G G+FG +L T + K+I+ + ++ E + E+ + L N+V
Sbjct: 19 KKIGNGRFGEVFLVKHKRTQEFFCWKAISYR-GLKEREKSQLVIEVNVMRELK-HKNIVR 76
Query: 89 FKSTYEDET--AVHVVMELCEGGDLFDRIIAKGYN-----SERDAATVLRAIVNAVNVCH 141
+ + ++ ++++ME C+ GDL R I K Y E + R +++A+ CH
Sbjct: 77 YIDRFLNKANQKLYILMEFCDAGDL-SRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCH 135
Query: 142 SMG-------VMHRDLKPENFSFISR---------------DDNALLKVTDFGSALLFEE 179
++ V+HRDLKP+N F+S + + K+ DFG +
Sbjct: 136 NLKDGPNGERVLHRDLKPQNI-FLSTGIRHIGKITAQANNLNGRPIAKIGDFGLSKNIGI 194
Query: 180 GQVYRDIVGSGFYIAPEVL---RRRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDA 236
+ VG+ +Y +PE+L + Y + D+W+ G I+Y L SG PF K +
Sbjct: 195 ESMAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPF----HKANNFS 250
Query: 237 ILQGEIDFDTD-PWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESG 287
L E+ D P S L++ +L K R +A Q L + ++ G
Sbjct: 251 QLISELKRGPDLPIKGKSKELNILIKNLLNLSAKERPSALQCLGYQIIKNVG 302
|
Length = 1021 |
| >gnl|CDD|132946 cd06615, PKc_MEK, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase | Back alignment and domain information |
|---|
Score = 70.5 bits (173), Expect = 2e-13
Identities = 75/319 (23%), Positives = 129/319 (40%), Gaps = 73/319 (22%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSI--AKKPKMRLAENDMIRREIQIRLYLSGQPNVVE 88
LG G GV + A K I KP +R + I RE+++ L+ P +V
Sbjct: 9 LGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIR----NQIIRELKV-LHECNSPYIVG 63
Query: 89 FKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMG---- 144
F + + + + ME +GG L D+++ K A + I+ +++ G
Sbjct: 64 FYGAFYSDGEISICMEHMDGGSL-DQVLKK-------AGRIPENILGKISIAVLRGLTYL 115
Query: 145 -----VMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDI----VGSGFYIAP 195
+MHRD+KP N SR + +K+ DFG + GQ+ + VG+ Y++P
Sbjct: 116 REKHKIMHRDVKPSNILVNSRGE---IKLCDFGVS-----GQLIDSMANSFVGTRSYMSP 167
Query: 196 EVLR-RRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEID----------- 243
E L+ Y + DIWS G+ L + G P K +A+ +
Sbjct: 168 ERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKE-LEAMFGRPVSEGEAKESHRPV 226
Query: 244 -------------FD------TDPWPSISSTA-----KDLVRRMLTKDPKRRITAAQVLE 279
F+ +P P + S A +D V + L K+PK R ++ +
Sbjct: 227 SGHPPDSPRPMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTK 286
Query: 280 HPWLRESGEASDDTSVILR 298
HP+++ + D + +
Sbjct: 287 HPFIKRAELEEVDFAGWVC 305
|
Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the downstream targets, ERK(extracellular signal-regulated kinase) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1/2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. This cascade has also been implicated in synaptic plasticity, migration, morphological determination, and stress response immunological reactions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1/2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 308 |
| >gnl|CDD|223069 PHA03390, pk1, serine/threonine-protein kinase 1; Provisional | Back alignment and domain information |
|---|
Score = 69.1 bits (170), Expect = 3e-13
Identities = 67/263 (25%), Positives = 112/263 (42%), Gaps = 37/263 (14%)
Query: 34 GQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTY 93
G+FG + T + + K I K K A E + + PN ++ +
Sbjct: 27 GKFGKVSVLKHKPTQKLFVQKII--KAKNFNAI------EPMVHQLMKDNPNFIKLYYSV 78
Query: 94 EDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPE 153
++M+ + GDLFD + +G SE + ++R +V A+N H ++H D+K E
Sbjct: 79 TTLKGHVLIMDYIKDGDLFDLLKKEGKLSEAEVKKIIRQLVEALNDLHKHNIIHNDIKLE 138
Query: 154 NFSFISRDDNALLKVTDFGSALLFEEGQ--VYRDIVGSGFYIAPEVLRRR-YGKEIDIWS 210
N + D + + D+G L G Y G+ Y +PE ++ Y D W+
Sbjct: 139 NVLYDRAKDR--IYLCDYG--LCKIIGTPSCYD---GTLDYFSPEKIKGHNYDVSFDWWA 191
Query: 211 AGVILYILLSGVPPFWAETKKGTYDAIL---------QGEIDFDTDPWPSISSTAKDLVR 261
GV+ Y LL+G PF K D L Q ++ F ++S A D V+
Sbjct: 192 VGVLTYELLTGKHPF-----KEDEDEELDLESLLKRQQKKLPFI----KNVSKNANDFVQ 242
Query: 262 RMLTKD-PKRRITAAQVLEHPWL 283
ML + R ++++HP+L
Sbjct: 243 SMLKYNINYRLTNYNEIIKHPFL 265
|
Length = 267 |
| >gnl|CDD|132970 cd06639, STKc_myosinIIIB, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin | Back alignment and domain information |
|---|
Score = 69.6 bits (170), Expect = 3e-13
Identities = 67/276 (24%), Positives = 116/276 (42%), Gaps = 36/276 (13%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEF- 89
+G+G +G Y T A K + + ++ I E I L PNVV+F
Sbjct: 30 IGKGTYGKVYKVTNKKDGSLAAVKILDPISDV----DEEIEAEYNILQSLPNHPNVVKFY 85
Query: 90 ----KSTYEDETAVHVVMELCEGG---DLFDRIIAKGYN-SERDAATVLRAIVNAVNVCH 141
K+ + +V+ELC GG +L ++ G E + +L + + H
Sbjct: 86 GMFYKADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLH 145
Query: 142 SMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDI-VGSGFYIAPEVLR- 199
+ ++HRD+K N + +K+ DFG + ++ R+ VG+ F++APEV+
Sbjct: 146 NNRIIHRDVKGNNILLTTEGG---VKLVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIAC 202
Query: 200 -----RRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISS 254
Y D+WS G+ L G PP + T I + +P P++
Sbjct: 203 EQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVKTLFKIPR-------NPPPTLLH 255
Query: 255 TAK------DLVRRMLTKDPKRRITAAQVLEHPWLR 284
K + + L KD + R + +LEHP+++
Sbjct: 256 PEKWCRSFNHFISQCLIKDFEARPSVTHLLEHPFIK 291
|
Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also present in the brain and testis. The human class IIIB myosin gene maps to a region that overlaps the locus for Bardet-Biedl syndrome, which is characterized by dysmorphic extremities, retinal dystrophy, obesity, male hypogenitalism, and renal abnormalities. Length = 291 |
| >gnl|CDD|143385 cd07880, STKc_p38gamma_MAPK12, Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Score = 70.4 bits (172), Expect = 3e-13
Identities = 61/218 (27%), Positives = 98/218 (44%), Gaps = 46/218 (21%)
Query: 141 HSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVG---SGFYIAPEV 197
H+ G++HRDLKP N + +++ LK+ DFG A Q ++ G + +Y APEV
Sbjct: 135 HAAGIIHRDLKPGNLAV---NEDCELKILDFGLAR-----QTDSEMTGYVVTRWYRAPEV 186
Query: 198 LRR--RYGKEIDIWSAGVILYILLSGVPPFWAE--------------TKKGTYDAILQGE 241
+ Y + +DIWS G I+ +L+G P F T + LQ E
Sbjct: 187 ILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPSKEFVQKLQSE 246
Query: 242 --------------IDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESG 287
DF + P+ + A +++ +ML D + RITAA+ L HP+ E
Sbjct: 247 DAKNYVKKLPRFRKKDFRS-LLPNANPLAVNVLEKMLVLDAESRITAAEALAHPYFEEFH 305
Query: 288 EASDDTSVILRMKQF----RRMNKLKKLTIKVIVEYLP 321
+ D+T F + + + K+LT I+ + P
Sbjct: 306 DPEDETEAPPYDDSFDEVDQSLEEWKRLTFTEILSFQP 343
|
Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12, is predominantly expressed in skeletal muscle. Unlike p38alpha and p38beta, p38gamma is insensitive to pyridinylimidazoles. It displays an antagonizing function compared to p38alpha. p38gamma inhibits, while p38alpha stimulates, c-Jun phosphorylation and AP-1 mediated transcription. p38gamma also plays a role in the signaling between Ras and the estrogen receptor and has been implicated to increase cell invasion and breast cancer progression. In Xenopus, p38gamma is critical in the meiotic maturation of oocytes. Length = 343 |
| >gnl|CDD|143378 cd07873, STKc_PCTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase | Back alignment and domain information |
|---|
Score = 68.5 bits (167), Expect = 1e-12
Identities = 50/189 (26%), Positives = 86/189 (45%), Gaps = 34/189 (17%)
Query: 130 LRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFE-EGQVYRDIVG 188
L ++ +N CH V+HRDLKP+N ++ LK+ DFG A + Y + V
Sbjct: 110 LFQLLRGLNYCHRRKVLHRDLKPQNLLI---NERGELKLADFGLARAKSIPTKTYSNEVV 166
Query: 189 SGFYIAPEVL--RRRYGKEIDIWSAGVILYILLSGVPPFWAET---------------KK 231
+ +Y P++L Y +ID+W G I Y + +G P F T +
Sbjct: 167 TLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTE 226
Query: 232 GTYDAILQGEIDFDTDPWPS------------ISSTAKDLVRRMLTKDPKRRITAAQVLE 279
T+ IL E +F + +P + S +L+ ++L + ++RI+A + ++
Sbjct: 227 ETWPGILSNE-EFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMK 285
Query: 280 HPWLRESGE 288
HP+ GE
Sbjct: 286 HPYFHCLGE 294
|
Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may play a role in regulating neurite outgrowth. It can also associate with Trap (Tudor repeat associator with PCTAIRE-2), a physiological partner of PCTAIRE-2; with p11, a small dimeric protein with similarity to S100; and with 14-3-3 proteins, mediators of phosphorylation-dependent interactions in many different proteins. Length = 301 |
| >gnl|CDD|173645 cd05084, PTKc_Fes, Catalytic domain of the Protein Tyrosine Kinase, Fes | Back alignment and domain information |
|---|
Score = 67.3 bits (164), Expect = 1e-12
Identities = 69/252 (27%), Positives = 110/252 (43%), Gaps = 25/252 (9%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKK--PKMRLAENDMIRREIQIRLYLSGQPNVVE 88
+GRG FG + + N P A KS + P ++ +E +I L PN+V
Sbjct: 3 IGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLK----AKFLQEARI-LKQYSHPNIVR 57
Query: 89 FKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNA---VNVCHSMGV 145
+ +++VMEL +GGD + +G +++ + NA + S
Sbjct: 58 LIGVCTQKQPIYIVMELVQGGDFLTFLRTEG--PRLKVKELIQMVENAAAGMEYLESKHC 115
Query: 146 MHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSG----FYIAPEVLRR- 200
+HRDL N ++ +LK++DFG + E+G VY G + APE L
Sbjct: 116 IHRDLAARNCLVTEKN---VLKISDFGMSREEEDG-VYASTGGMKQIPVKWTAPEALNYG 171
Query: 201 RYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDL 259
RY E D+WS G++L+ S G P+ + + T +AI QG + P L
Sbjct: 172 RYSSESDVWSFGILLWEAFSLGAVPYANLSNQQTREAIEQGVRLPCPELCP---DAVYRL 228
Query: 260 VRRMLTKDPKRR 271
+ R DP +R
Sbjct: 229 MERCWEYDPGQR 240
|
Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular endothelial, epithelial, and neuronal cells. It plays important roles in cell growth and differentiation, angiogenesis, inflammation and immunity, and cytoskeletal regulation. A recent study implicates Fes kinase as a tumor suppressor in colorectal cancer. Length = 252 |
| >gnl|CDD|173756 cd08216, PK_STRAD, Pseudokinase domain of STE20-related kinase adapter protein | Back alignment and domain information |
|---|
Score = 68.1 bits (167), Expect = 1e-12
Identities = 62/313 (19%), Positives = 124/313 (39%), Gaps = 56/313 (17%)
Query: 27 FGRMLGRG--QFGVSYLCTENSTNRPYACK--SIAKKPKMRLAENDMIRREIQIRLYLSG 82
++G+ + +L TN A K ++ K L +++EI L
Sbjct: 2 LLTLIGKCFEDLMIVHLAKHKPTNTLVAVKKINLDSCSKEDLKL---LQQEIITSRQLQ- 57
Query: 83 QPNVVEFKSTYEDETAVHVVMELCEGG---DLFDRIIAKGYNSERDAATVLRAIVNAVNV 139
PN++ + +++ ++ ++VV L G DL +G E A +L+ ++NA++
Sbjct: 58 HPNILPYVTSFIVDSELYVVSPLMAYGSCEDLLKTHFPEGLP-ELAIAFILKDVLNALDY 116
Query: 140 CHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSAL-LFEEGQVYRDIVGSGFYI----- 193
HS G +HR +K S I + + ++ ++ + + G+ R +
Sbjct: 117 IHSKGFIHRSVKA---SHILLSGDGKVVLSGLRYSVSMIKHGKRQRVVHDFPKSSVKNLP 173
Query: 194 --APEVLR---RRYGKEIDIWSAGVILYILLSGVPPF--------WAETKKGTYDAIL-- 238
+PEVL+ + Y ++ DI+S G+ L +G PF E +GT +L
Sbjct: 174 WLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQMLLEKVRGTVPCLLDK 233
Query: 239 ------QGEIDFDTDPW--PSISSTAKDLVRRM------------LTKDPKRRITAAQVL 278
+ + P+ + R L +DP+ R +A+Q+L
Sbjct: 234 STYPLYEDSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLL 293
Query: 279 EHPWLRESGEASD 291
H + ++ +
Sbjct: 294 NHSFFKQCKRRNT 306
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buccal mucosa. There are two forms of STRAD, alpha and beta, that complex with LKB1 and MO25. The structure of STRAD-alpha is available and shows that this protein binds ATP, has an ordered activation loop, and adopts a closed conformation typical of fully active protein kinases. It does not possess activity due to nonconservative substitutions of essential catalytic residues. ATP binding enhances the affinity of STRAD for MO25. The conformation of STRAD-alpha stabilized through ATP and MO25 may be needed to activate LKB1. Length = 314 |
| >gnl|CDD|143379 cd07874, STKc_JNK3, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3 | Back alignment and domain information |
|---|
Score = 68.6 bits (167), Expect = 1e-12
Identities = 68/275 (24%), Positives = 119/275 (43%), Gaps = 50/275 (18%)
Query: 48 NRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVVMELCE 107
+RP+ ++ AK+ L + + I L NV + + E+ V++VMEL +
Sbjct: 51 SRPFQNQTHAKRAYRELVLMKCVNHKNIISLL-----NVFTPQKSLEEFQDVYLVMELMD 105
Query: 108 GGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLK 167
++I + ER + +L ++ + HS G++HRDLKP N I + LK
Sbjct: 106 AN--LCQVIQMELDHER-MSYLLYQMLCGIKHLHSAGIIHRDLKPSN---IVVKSDCTLK 159
Query: 168 VTDFGSALLFEEGQVYRDIVGSGFYIAPEV-LRRRYGKEIDIWSAGVILYILLS------ 220
+ DFG A + V + +Y APEV L Y + +DIWS G I+ ++
Sbjct: 160 ILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFP 219
Query: 221 ---------------GVP-PFWAETKKGTYDAILQGEIDFDTDPWPSI------------ 252
G P P + + + T ++ + +P +
Sbjct: 220 GRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEH 279
Query: 253 ----SSTAKDLVRRMLTKDPKRRITAAQVLEHPWL 283
+S A+DL+ +ML DP +RI+ + L+HP++
Sbjct: 280 NKLKASQARDLLSKMLVIDPAKRISVDEALQHPYI 314
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, stroke, sciatic axotomy neural death, and neuronal death due to NGF deprivation, oxidative stress, or exposure to beta-amyloid peptide. This suggests that JNK3 may play roles in the pathogenesis of these diseases. Length = 355 |
| >gnl|CDD|143349 cd07844, STKc_PCTAIRE_like, Catalytic domain of PCTAIRE-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 67.0 bits (164), Expect = 2e-12
Identities = 51/181 (28%), Positives = 77/181 (42%), Gaps = 45/181 (24%)
Query: 140 CHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFE-EGQVYRDIVGSGFYIAPEVL 198
CH V+HRDLKP+N IS + LK+ DFG A + Y + V + +Y P+VL
Sbjct: 119 CHQRRVLHRDLKPQNL-LIS--ERGELKLADFGLARAKSVPSKTYSNEVVTLWYRPPDVL 175
Query: 199 --RRRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDT------DPWP 250
Y +D+W G I Y + +G P F G+ D Q F + WP
Sbjct: 176 LGSTEYSTSLDMWGVGCIFYEMATGRPLF-----PGSTDVEDQLHKIFRVLGTPTEETWP 230
Query: 251 SISSTAK----------------------------DLVRRMLTKDPKRRITAAQVLEHPW 282
+SS + +L + L +PK+RI+AA+ ++HP+
Sbjct: 231 GVSSNPEFKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMKHPY 290
Query: 283 L 283
Sbjct: 291 F 291
|
Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the membrane-associated cyclin Y. PCTAIRE-like proteins show unusual expression patterns with high levels in post-mitotic tissues, suggesting that they may be involved in regulating post-mitotic cellular events. Length = 291 |
| >gnl|CDD|143384 cd07879, STKc_p38delta_MAPK13, Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Score = 67.2 bits (164), Expect = 3e-12
Identities = 56/184 (30%), Positives = 84/184 (45%), Gaps = 38/184 (20%)
Query: 141 HSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFE-EGQVYRDIVGSGFYIAPEVLR 199
HS G++HRDLKP N + +++ LK+ DFG A + E Y V + +Y APEV+
Sbjct: 134 HSAGIIHRDLKPGNLAV---NEDCELKILDFGLARHADAEMTGY---VVTRWYRAPEVIL 187
Query: 200 R--RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQ------------------ 239
Y + +DIWS G I+ +L+G F + IL+
Sbjct: 188 NWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGPEFVQKLEDKAA 247
Query: 240 ----------GEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEA 289
DF T +P S A DL+ +ML D +R+TA + LEHP+ +A
Sbjct: 248 KSYIKSLPKYPRKDFST-LFPKASPQAVDLLEKMLELDVDKRLTATEALEHPYFDSFRDA 306
Query: 290 SDDT 293
++T
Sbjct: 307 DEET 310
|
Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13, is found in skeletal muscle, heart, lung, testis, pancreas, and small intestine. It regulates microtubule function by phosphorylating Tau. It activates the c-jun promoter and plays a role in G2 cell cycle arrest. It also controls the degration of c-Myb, which is associated with myeloid leukemia and poor prognosis in colorectal cancer. p38delta is the main isoform involved in regulating the differentiation and apoptosis of keratinocytes. Length = 342 |
| >gnl|CDD|143375 cd07870, STKc_PFTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase | Back alignment and domain information |
|---|
Score = 66.1 bits (161), Expect = 4e-12
Identities = 54/182 (29%), Positives = 71/182 (39%), Gaps = 49/182 (26%)
Query: 141 HSMGVMHRDLKPENF--SFISRDDNALLKVTDFGSALLFE-EGQVYRDIVGSGFYIAPEV 197
H ++HRDLKP+N S++ LK+ DFG A Q Y V + +Y P+V
Sbjct: 120 HGQHILHRDLKPQNLLISYLGE-----LKLADFGLARAKSIPSQTYSSEVVTLWYRPPDV 174
Query: 198 L--RRRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDT------DPW 249
L Y +DIW AG I +L G P F G D Q E + D W
Sbjct: 175 LLGATDYSSALDIWGAGCIFIEMLQGQPAF-----PGVSDVFEQLEKIWTVLGVPTEDTW 229
Query: 250 PSISS----------------------------TAKDLVRRMLTKDPKRRITAAQVLEHP 281
P +S A+DL +ML PK RI+A L HP
Sbjct: 230 PGVSKLPNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALLHP 289
Query: 282 WL 283
+
Sbjct: 290 YF 291
|
Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recessive form of juvenile ALS. The function of PFTAIRE-2 is not yet known. Length = 291 |
| >gnl|CDD|177557 PHA03209, PHA03209, serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Score = 66.8 bits (163), Expect = 5e-12
Identities = 45/203 (22%), Positives = 79/203 (38%), Gaps = 44/203 (21%)
Query: 124 RDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVY 183
A + + I+ + H+ ++HRD+K EN FI+ D + D G+A +
Sbjct: 157 DQALIIEKQILEGLRYLHAQRIIHRDVKTENI-FINDVDQVCI--GDLGAAQFPVVAPAF 213
Query: 184 RDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEI 242
+ G+ APEVL R +Y + DIWSAG++L+ +L+ + + + +
Sbjct: 214 LGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTIFEDPPSTPEEYVKSCHS 273
Query: 243 --------------DFDTDP---------------------WPSISS-----TAKDLVRR 262
+F DP +P + LV +
Sbjct: 274 HLLKIISTLKVHPEEFPRDPGSRLVRGFIEYASLERQPYTRYPCFQRVNLPIDGEFLVHK 333
Query: 263 MLTKDPKRRITAAQVLEHPWLRE 285
MLT D R +A ++L +P +
Sbjct: 334 MLTFDAAMRPSAEEILNYPMFAQ 356
|
Length = 357 |
| >gnl|CDD|143377 cd07872, STKc_PCTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase | Back alignment and domain information |
|---|
Score = 66.2 bits (161), Expect = 6e-12
Identities = 51/187 (27%), Positives = 80/187 (42%), Gaps = 32/187 (17%)
Query: 130 LRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFE-EGQVYRDIVG 188
L I+ + CH V+HRDLKP+N R + LK+ DFG A + Y + V
Sbjct: 110 LYQILRGLAYCHRRKVLHRDLKPQNLLINERGE---LKLADFGLARAKSVPTKTYSNEVV 166
Query: 189 SGFYIAPEVL--RRRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDT 246
+ +Y P+VL Y +ID+W G I + + SG P F T + I +
Sbjct: 167 TLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTE 226
Query: 247 DPWPSISSTAK--------------------------DLVRRMLTKDPKRRITAAQVLEH 280
+ WP ISS + +L+ + L + K+RI+A + ++H
Sbjct: 227 ETWPGISSNDEFKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMKH 286
Query: 281 PWLRESG 287
+ R G
Sbjct: 287 AYFRSLG 293
|
Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play a role in regulating mitochondrial function in neurons. Length = 309 |
| >gnl|CDD|143376 cd07871, STKc_PCTAIRE3, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase | Back alignment and domain information |
|---|
Score = 65.8 bits (160), Expect = 7e-12
Identities = 48/180 (26%), Positives = 75/180 (41%), Gaps = 32/180 (17%)
Query: 133 IVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFE-EGQVYRDIVGSGF 191
++ ++ CH ++HRDLKP+N ++ LK+ DFG A + Y + V + +
Sbjct: 112 LLRGLSYCHKRKILHRDLKPQNLLI---NEKGELKLADFGLARAKSVPTKTYSNEVVTLW 168
Query: 192 YIAPEVL--RRRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPW 249
Y P+VL Y ID+W G ILY + +G P F T K I + + W
Sbjct: 169 YRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETW 228
Query: 250 PSISSTAK--------------------------DLVRRMLTKDPKRRITAAQVLEHPWL 283
P I+S + DL+ +L + K RI+A L H +
Sbjct: 229 PGITSNEEFRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALRHSYF 288
|
Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filaments (PHFs) and stimulate Tau phosphorylation. As AD progresses, phosphorylated Tau aggregates and forms PHFs, which leads to the formation of neurofibrillary tangles (NFTs). In human glioma cells, PCTAIRE-3 induces cell cycle arrest and cell death. Length = 288 |
| >gnl|CDD|143382 cd07877, STKc_p38alpha_MAPK14, Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Score = 65.8 bits (160), Expect = 9e-12
Identities = 52/189 (27%), Positives = 84/189 (44%), Gaps = 34/189 (17%)
Query: 133 IVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFY 192
I+ + HS ++HRDLKP N + +++ LK+ DFG A ++ V + +Y
Sbjct: 129 ILRGLKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLARHTDDEMT--GYVATRWY 183
Query: 193 IAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPFWAETK----------KGTYDAILQG 240
APE++ Y + +DIWS G I+ LL+G F GT A L
Sbjct: 184 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLK 243
Query: 241 EIDFDT-----------------DPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWL 283
+I ++ + + + A DL+ +ML D +RITAAQ L H +
Sbjct: 244 KISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 303
Query: 284 RESGEASDD 292
+ + D+
Sbjct: 304 AQYHDPDDE 312
|
Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14, is expressed in most tissues and is the major isoform involved in the immune and inflammatory response. It is the central p38 MAPK involved in myogenesis. It plays a role in regulating cell cycle check-point transition and promoting cell differentiation. p38alpha also regulates cell proliferation and death through crosstalk with the JNK pathway. Its substrates include MAPK activated protein kinase 2 (MK2), MK5, and the transcription factors ATF2 and Mitf. Length = 345 |
| >gnl|CDD|227455 COG5126, FRQ1, Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only] | Back alignment and domain information |
|---|
Score = 62.7 bits (153), Expect = 1e-11
Identities = 44/144 (30%), Positives = 71/144 (49%), Gaps = 8/144 (5%)
Query: 319 YLPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAV-KNSST- 376
L +E+ Q LKE F D D +G + +EL L +G +E ++ L E + + T
Sbjct: 13 QLTEEQIQELKEAFQLFDRDSDGLIDRNELGKILRSLGFNPSEAEINKLFEEIDAGNETV 72
Query: 377 -----LESLCENLPTKEK-QKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQ 430
L + L +K ++L E F+ D D+ +++ EL+ L LG L + EV +
Sbjct: 73 DFPEFLTVMSVKLKRGDKEEELREAFKLFDKDHDGYISIGELRRVLKSLGERLSDEEVEK 132
Query: 431 YMEAGDIDGNGNIDSIEFVNLMTD 454
++ D DG+G ID EF L+ D
Sbjct: 133 LLKEYDEDGDGEIDYEEFKKLIKD 156
|
Length = 160 |
| >gnl|CDD|173701 cd05610, STKc_MASTL, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase | Back alignment and domain information |
|---|
Score = 66.8 bits (163), Expect = 1e-11
Identities = 35/101 (34%), Positives = 58/101 (57%), Gaps = 10/101 (9%)
Query: 186 IVGSGFYIAPEVL-RRRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDF 244
I+G+ Y+APE+L + +G +D W+ GV L+ L+G+PPF ET + + IL +I
Sbjct: 540 ILGTPDYLAPELLLGKPHGPAVDWWALGVCLFEFLTGIPPFNDETPQQVFQNILNRDI-- 597
Query: 245 DTDPWP----SISSTAKDLVRRMLTKDPKRRITAAQVLEHP 281
PWP +S A++ + +LT DP +R ++ +HP
Sbjct: 598 ---PWPEGEEKLSVNAQNAIEILLTMDPTKRAGLKELKQHP 635
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ14813 is associated with autosomal dominant thrombocytopenia. To date, the function of MASTL is unknown. Length = 669 |
| >gnl|CDD|143383 cd07878, STKc_p38beta_MAPK11, Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Score = 65.1 bits (158), Expect = 2e-11
Identities = 73/329 (22%), Positives = 137/329 (41%), Gaps = 46/329 (13%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLS-----GQPN 85
+G G +G + + A K +++ P L RE+++ ++ G +
Sbjct: 23 VGSGAYGSVCSAYDTRLRQKVAVKKLSR-PFQSLIHARRTYRELRLLKHMKHENVIGLLD 81
Query: 86 VVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGV 145
V ++ E+ V++V L G DL + I+ S+ ++ ++ + HS G+
Sbjct: 82 VFTPATSIENFNEVYLVTNLM-GADL-NNIVKCQKLSDEHVQFLIYQLLRGLKYIHSAGI 139
Query: 146 MHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLRR--RYG 203
+HRDLKP N ++ +++ L++ DFG A ++ V + +Y APE++ Y
Sbjct: 140 IHRDLKPSN---VAVNEDCELRILDFGLARQADDEMT--GYVATRWYRAPEIMLNWMHYN 194
Query: 204 KEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISST-------- 255
+ +DIWS G I+ LL G F I++ + ISS
Sbjct: 195 QTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIMEVVGTPSPEVLKKISSEHARKYIQS 254
Query: 256 -------------------AKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASDDTSVI 296
A DL+ +ML D +RI+A++ L HP+ + + D+
Sbjct: 255 LPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAHPYFSQYHDPEDEPEAE 314
Query: 297 LRMKQF----RRMNKLKKLTIKVIVEYLP 321
+ R + + K+LT + + + P
Sbjct: 315 PYDESPENKERTIEEWKELTYEEVSSFKP 343
|
Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is widely expressed in tissues and shows more similarity with p38alpha than with the other isoforms. Both are sensitive to pyridinylimidazoles and share some common substrates such as MAPK activated protein kinase 2 (MK2) and the transcription factors ATF2, c-Fos and, ELK-1. p38beta is involved in regulating the activation of the cyclooxygenase-2 promoter and the expression of TGFbeta-induced alpha-smooth muscle cell actin. Length = 343 |
| >gnl|CDD|173701 cd05610, STKc_MASTL, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase | Back alignment and domain information |
|---|
Score = 65.3 bits (159), Expect = 3e-11
Identities = 47/142 (33%), Positives = 73/142 (51%), Gaps = 8/142 (5%)
Query: 33 RGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIR--LYLSGQPNVVEFK 90
RG FG YL + + ++ YA K + KK M +M+ + R L LS P +V
Sbjct: 14 RGAFGKVYLGRKKNNSKLYAVK-VVKKADM--INKNMVHQVQAERDALALSKSPFIVHLY 70
Query: 91 STYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDL 150
+ + V++VME GGD+ + GY E A + + A++ H G++HRDL
Sbjct: 71 YSLQSANNVYLVMEYLIGGDVKSLLHIYGYFDEEMAVKYISEVALALDYLHRHGIIHRDL 130
Query: 151 KPENFSFISRDDNALLKVTDFG 172
KP+N IS + + +K+TDFG
Sbjct: 131 KPDNM-LISNEGH--IKLTDFG 149
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ14813 is associated with autosomal dominant thrombocytopenia. To date, the function of MASTL is unknown. Length = 669 |
| >gnl|CDD|238008 cd00051, EFh, EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands | Back alignment and domain information |
|---|
Score = 58.3 bits (142), Expect = 3e-11
Identities = 27/63 (42%), Positives = 36/63 (57%)
Query: 391 KLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVN 450
+L E FR D D T++ ELKA L LG L E E+++ + D DG+G ID EF+
Sbjct: 1 ELREAFRLFDKDGDGTISADELKAALKSLGEGLSEEEIDEMIREVDKDGDGKIDFEEFLE 60
Query: 451 LMT 453
LM
Sbjct: 61 LMA 63
|
Ca2+ binding induces a conformational change in the EF-hand motif, leading to the activation or inactivation of target proteins. EF-hands tend to occur in pairs or higher copy numbers. Length = 63 |
| >gnl|CDD|132981 cd06650, PKc_MEK1, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1 | Back alignment and domain information |
|---|
Score = 63.5 bits (154), Expect = 5e-11
Identities = 75/304 (24%), Positives = 128/304 (42%), Gaps = 59/304 (19%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSI--AKKPKMRLAENDMIRREIQIRLYLSGQPNVVE 88
LG G GV + + + A K I KP +R + I RE+Q+ L+ P +V
Sbjct: 13 LGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIR----NQIIRELQV-LHECNSPYIVG 67
Query: 89 FKSTYEDETAVHVVMELCEGGDLFDRIIAK-GYNSERDAATVLRAIVNAVNVCHSM-GVM 146
F + + + + ME +GG L D+++ K G E+ V A++ + +M
Sbjct: 68 FYGAFYSDGEISICMEHMDGGSL-DQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIM 126
Query: 147 HRDLKPENFSFISRDDNALLKVTDFG-SALLFEEGQVYRDIVGSGFYIAPEVLR-RRYGK 204
HRD+KP N SR + +K+ DFG S L + + VG+ Y++PE L+ Y
Sbjct: 127 HRDVKPSNILVNSRGE---IKLCDFGVSGQLID--SMANSFVGTRSYMSPERLQGTHYSV 181
Query: 205 EIDIWSAGVILYILLSG---VPPFWAETKKGTYDAILQGE-IDFDTDPWPS--------- 251
+ DIWS G+ L + G +PP A+ + + ++G+ + +T P P
Sbjct: 182 QSDIWSMGLSLVEMAIGRYPIPPPDAKELELMFGCPVEGDPAESETSPRPRPPGRPLSSY 241
Query: 252 -----------------------------ISSTAKDLVRRMLTKDPKRRITAAQVLEHPW 282
+ +D V + L K+P R Q++ H +
Sbjct: 242 GPDSRPPMAIFELLDYIVNEPPPKLPSGVFGAEFQDFVNKCLIKNPAERADLKQLMVHAF 301
Query: 283 LRES 286
++ S
Sbjct: 302 IKRS 305
|
Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. MEK1 also plays a role in cell cycle control. Length = 333 |
| >gnl|CDD|173333 PTZ00036, PTZ00036, glycogen synthase kinase; Provisional | Back alignment and domain information |
|---|
Score = 64.3 bits (156), Expect = 5e-11
Identities = 75/302 (24%), Positives = 116/302 (38%), Gaps = 54/302 (17%)
Query: 25 YFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQP 84
Y G ++G G FGV Y T+ A K + + P+ + RE+ I L+
Sbjct: 68 YKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDPQYK-------NRELLIMKNLN-HI 119
Query: 85 NVVEFKSTYEDETA--------VHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNA 136
N++ K Y E ++VVME K Y A + + +
Sbjct: 120 NIIFLKDYYYTECFKKNEKNIFLNVVMEFIPQTV---HKYMKHYARNNHALPLFLVKLYS 176
Query: 137 VNVC------HSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSG 190
+C HS + HRDLKP+N LK+ DFGSA GQ + S
Sbjct: 177 YQLCRALAYIHSKFICHRDLKPQNLLIDPNTHT--LKLCDFGSAKNLLAGQRSVSYICSR 234
Query: 191 FYIAPEVL--RRRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQ--------- 239
FY APE++ Y ID+WS G I+ ++ G P F ++ I+Q
Sbjct: 235 FYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQVLGTPTEDQ 294
Query: 240 --------GEIDF-DTDP------WPS-ISSTAKDLVRRMLTKDPKRRITAAQVLEHPWL 283
+I F D P +P A + + + L +P +R+ + L P+
Sbjct: 295 LKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALADPFF 354
Query: 284 RE 285
+
Sbjct: 355 DD 356
|
Length = 440 |
| >gnl|CDD|132968 cd06637, STKc_TNIK, Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase | Back alignment and domain information |
|---|
Score = 62.4 bits (151), Expect = 8e-11
Identities = 61/274 (22%), Positives = 118/274 (43%), Gaps = 34/274 (12%)
Query: 30 MLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEF 89
++G G +G Y T + A K + + E + I++EI + S N+ +
Sbjct: 13 LVGNGTYGQVYKGRHVKTGQLAAIKVM----DVTGDEEEEIKQEINMLKKYSHHRNIATY 68
Query: 90 KSTYEDET------AVHVVMELCEGGDLFDRIIAKGYNSERDA--ATVLRAIVNAVNVCH 141
+ + + +VME C G + D I N+ ++ A + R I+ ++ H
Sbjct: 69 YGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLH 128
Query: 142 SMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRD-IVGSGFYIAPEVLR- 199
V+HRD+K +N + +NA +K+ DFG + + R+ +G+ +++APEV+
Sbjct: 129 QHKVIHRDIKGQN---VLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIAC 185
Query: 200 -----RRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISS 254
Y + D+WS G+ + G PP ++ +P P + S
Sbjct: 186 DENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHP-------MRALFLIPRNPAPRLKS 238
Query: 255 TA-----KDLVRRMLTKDPKRRITAAQVLEHPWL 283
+ + L K+ +R T Q+++HP++
Sbjct: 239 KKWSKKFQSFIESCLVKNHSQRPTTEQLMKHPFI 272
|
Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activates the c-Jun N-terminal kinase (JNK) pathway and plays a role in regulating the actin cytoskeleton. Length = 272 |
| >gnl|CDD|173629 cd05041, PTKc_Fes_like, Catalytic domain of Fes-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 61.7 bits (150), Expect = 8e-11
Identities = 58/228 (25%), Positives = 95/228 (41%), Gaps = 33/228 (14%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIR--REIQIRLYLSGQPNV 86
+G+G FG Y + K + L + + +E +I PN+
Sbjct: 1 EKIGKGNFGDVYKGVLKGN-----TEVAVKTCRSTLPPDLKRKFLQEAEILKQYD-HPNI 54
Query: 87 VEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSM--- 143
V+ + +++VMEL GG L + K + TV + + +++ M
Sbjct: 55 VKLIGVCVQKQPIYIVMELVPGGSLLTFLRKKK-----NRLTVKKLLQMSLDAAAGMEYL 109
Query: 144 ---GVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGF------YIA 194
+HRDL N +N +LK++DFG + EEG +Y V G + A
Sbjct: 110 ESKNCIHRDLAARNCLV---GENNVLKISDFGMSRE-EEGGIY--TVSDGLKQIPIKWTA 163
Query: 195 PEVLRR-RYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQG 240
PE L RY E D+WS G++L+ S G P+ + + T + I G
Sbjct: 164 PEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQTRERIESG 211
|
Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions. Length = 251 |
| >gnl|CDD|132947 cd06616, PKc_MKK4, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4 | Back alignment and domain information |
|---|
Score = 62.0 bits (151), Expect = 1e-10
Identities = 74/275 (26%), Positives = 117/275 (42%), Gaps = 36/275 (13%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSI-----AKKPKMRLAENDMIRREIQIRLYLSGQPN 85
+GRG FG + A K I K+ K L + D++ R S P
Sbjct: 12 IGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRS-------SDCPY 64
Query: 86 VVEFKSTYEDETAVHVVMELCEGG-DLFDRII---AKGYNSERDAATVLRAIVNAVN-VC 140
+V+F E + MEL + D F + + K E + A V A+N +
Sbjct: 65 IVKFYGALFREGDCWICMELMDISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLK 124
Query: 141 HSMGVMHRDLKPENFSFISRDDNALLKVTDFG-SALLFEEGQVYRDIVGSGFYIAPEVL- 198
+ ++HRD+KP N I D N +K+ DFG S L + RD G Y+APE +
Sbjct: 125 EELKIIHRDVKPSN---ILLDRNGNIKLCDFGISGQLVDSIAKTRD-AGCRPYMAPERID 180
Query: 199 -RRRYGKEI--DIWSAGVILYILLSGVPPF--WAETKKGTYDAILQ---GEID-FDTDPW 249
R G ++ D+WS G+ LY + +G P+ W +D + Q G+
Sbjct: 181 PSARDGYDVRSDVWSLGITLYEVATGKFPYPKW----NSVFDQLTQVVKGDPPILSNSEE 236
Query: 250 PSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLR 284
S + + + L KD +R ++LEHP+++
Sbjct: 237 REFSPSFVNFINLCLIKDESKRPKYKELLEHPFIK 271
|
Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates the downstream targets, c-Jun N-terminal kinase (JNK) and p38 MAPK, on specific threonine and tyrosine residues. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. Their activation is associated with the induction of cell death. Mice deficient in MKK4 die during embryogenesis and display anemia, severe liver hemorrhage, and abnormal hepatogenesis. MKK4 may also play roles in the immune system and in cardiac hypertrophy. It plays a major role in cancer as a tumor and metastasis suppressor. Under certain conditions, MKK4 is pro-oncogenic. Length = 288 |
| >gnl|CDD|143380 cd07875, STKc_JNK1, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1 | Back alignment and domain information |
|---|
Score = 62.4 bits (151), Expect = 1e-10
Identities = 68/275 (24%), Positives = 117/275 (42%), Gaps = 50/275 (18%)
Query: 48 NRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVVMELCE 107
+RP+ ++ AK+ L + + I G NV + + E+ V++VMEL +
Sbjct: 58 SRPFQNQTHAKRAYRELVLMKCVNHKNII-----GLLNVFTPQKSLEEFQDVYIVMELMD 112
Query: 108 GGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLK 167
++I + ER + +L ++ + HS G++HRDLKP N I + LK
Sbjct: 113 AN--LCQVIQMELDHER-MSYLLYQMLCGIKHLHSAGIIHRDLKPSN---IVVKSDCTLK 166
Query: 168 VTDFGSALLFEEGQVYRDIVGSGFYIAPEV-LRRRYGKEIDIWSAGVILYILLSGVPPFW 226
+ DFG A + V + +Y APEV L Y + +DIWS G I+ ++ G F
Sbjct: 167 ILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFP 226
Query: 227 AETKKGTYDAILQG-------------------------------EIDFDTDPWPSIS-- 253
++ +++ E F +P+ S
Sbjct: 227 GTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEH 286
Query: 254 -----STAKDLVRRMLTKDPKRRITAAQVLEHPWL 283
S A+DL+ +ML D +RI+ + L+HP++
Sbjct: 287 NKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 321
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK1 specifically binds with JAMP (JNK1-associated membrane protein), which regulates the duration of JNK1 activity in response to stimuli. Specific JNK1 substrates include Itch and SG10, which are implicated in Th2 responses and airway inflammation, and microtubule dynamics and axodendritic length, respectively. Mice deficient in Jnk1 are protected against arthritis, obesity, type 2 diabetes, cardiac cell death, and non-alcoholic liver disease, suggesting that JNK1 may play roles in the pathogenesis of these diseases. Length = 364 |
| >gnl|CDD|133211 cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Score = 61.1 bits (148), Expect = 2e-10
Identities = 59/220 (26%), Positives = 97/220 (44%), Gaps = 30/220 (13%)
Query: 29 RMLGRGQFG-VSYLC---TENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQP 84
R+LG G FG VS C + T A K++ ++ + ++EI I L +
Sbjct: 10 RVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSG--WKKEINILKTLYHE- 66
Query: 85 NVVEFKSTYED--ETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVC-- 140
N+V++K + + ++ME G L D + + + + ++ A +C
Sbjct: 67 NIVKYKGCCSEQGGKGLQLIMEYVPLGSLRDYL-------PKHKLNLAQLLLFAQQICEG 119
Query: 141 ----HSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSG----FY 192
HS +HRDL N + D++ L+K+ DFG A EG Y + G F+
Sbjct: 120 MAYLHSQHYIHRDLAARN---VLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFW 176
Query: 193 IAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKK 231
A E L+ ++ D+WS GV LY LL+ + KK
Sbjct: 177 YAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKK 216
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 283 |
| >gnl|CDD|143373 cd07868, STKc_CDK8, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8 | Back alignment and domain information |
|---|
Score = 61.2 bits (148), Expect = 2e-10
Identities = 56/208 (26%), Positives = 89/208 (42%), Gaps = 54/208 (25%)
Query: 128 TVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRD-DNALLKVTDFGSALLFEEG-QVYRD 185
++L I++ ++ H+ V+HRDLKP N + + +K+ D G A LF + D
Sbjct: 112 SLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLAD 171
Query: 186 ---IVGSGFYIAPEVL--RRRYGKEIDIWSAGVILYILLSGVPPF--------------- 225
+V + +Y APE+L R Y K IDIW+ G I LL+ P F
Sbjct: 172 LDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHH 231
Query: 226 -----------------WAETKKGTYDAILQGEIDFDTDPWPSIS-------------ST 255
W + KK + L DF + + + S S
Sbjct: 232 DQLDRIFNVMGFPADKDWEDIKKMPEHSTLMK--DFRRNTYTNCSLIKYMEKHKVKPDSK 289
Query: 256 AKDLVRRMLTKDPKRRITAAQVLEHPWL 283
A L++++LT DP +RIT+ Q ++ P+
Sbjct: 290 AFHLLQKLLTMDPIKRITSEQAMQDPYF 317
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDK8 phosphorylates cyclin H, a subunit of the general transcription factor TFIIH, which results in the inhibition of TFIIH-dependent phosphorylation of the C-terminal domain (CTD) of RNAP II, facilitating the inhibition of transcription. It has also been shown to promote transcription by a mechanism that is likely to involve RNAP II phosphorylation. CDK8 also functions as a stimulus-specific positive coregulator of p53 transcriptional responses. Length = 317 |
| >gnl|CDD|143367 cd07862, STKc_CDK6, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6 | Back alignment and domain information |
|---|
Score = 60.8 bits (147), Expect = 3e-10
Identities = 68/251 (27%), Positives = 108/251 (43%), Gaps = 51/251 (20%)
Query: 72 REIQIRLYLSG--QPNVVEF-----KSTYEDETAVHVVMELCEGGDL---FDRIIAKGYN 121
RE+ + +L PNVV S + ET + +V E + DL D++ G
Sbjct: 50 REVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGVP 108
Query: 122 SERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQ 181
+E + + ++ ++ HS V+HRDLKP+N S + +K+ DFG A ++
Sbjct: 109 TETIKDMMFQ-LLRGLDFLHSHRVVHRDLKPQNILVTS---SGQIKLADFGLARIYSFQM 164
Query: 182 VYRDIVGSGFYIAPEV-LRRRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQG 240
+V + +Y APEV L+ Y +D+WS G I + P F +G+ D G
Sbjct: 165 ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLF-----RGSSDVDQLG 219
Query: 241 EIDFDT------DPWPS-----------------------ISSTAKDLVRRMLTKDPKRR 271
+I D + WP I KDL+ + LT +P +R
Sbjct: 220 KI-LDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKR 278
Query: 272 ITAAQVLEHPW 282
I+A L HP+
Sbjct: 279 ISAYSALSHPY 289
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytoplasm. It is also present in the ruffling edge of spreading fibroblasts and may play a role in cell spreading. It binds to the p21 inhibitor without any effect on its own activity and it is overexpressed in squamous cell carcinomas and neuroblastomas. CDK6 has also been shown to inhibit cell differentiation in many cell types. Length = 290 |
| >gnl|CDD|173729 cd06617, PKc_MKK3_6, Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6 | Back alignment and domain information |
|---|
Score = 60.5 bits (147), Expect = 3e-10
Identities = 68/287 (23%), Positives = 120/287 (41%), Gaps = 35/287 (12%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFK 90
LGRG +GV T A K I + + E + ++ I + P V F
Sbjct: 9 LGRGAYGVVDKMRHVPTGTIMAVKRI--RATVNSQEQKRLLMDLDISMRSVDCPYTVTFY 66
Query: 91 STYEDETAVHVVMELCEGG--DLFDRIIAKGYNSERDA-ATVLRAIVNAVNVCHS-MGVM 146
E V + ME+ + + ++ KG D + +IV A+ HS + V+
Sbjct: 67 GALFREGDVWICMEVMDTSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLSVI 126
Query: 147 HRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIV-----GSGFYIAPEVL--- 198
HRD+KP N + + N +K+ DFG + G + + G Y+APE +
Sbjct: 127 HRDVKPSN---VLINRNGQVKLCDFGIS-----GYLVDSVAKTIDAGCKPYMAPERINPE 178
Query: 199 --RRRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSI---- 252
++ Y + D+WS G+ + L +G P+ ++ K + + Q +P P +
Sbjct: 179 LNQKGYDVKSDVWSLGITMIELATGRFPY--DSWKTPFQQLKQ----VVEEPSPQLPAEK 232
Query: 253 -SSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASDDTSVILR 298
S +D V + L K+ K R ++L+HP+ + D + +
Sbjct: 233 FSPEFQDFVNKCLKKNYKERPNYPELLQHPFFELHLSKNTDVASFVS 279
|
Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs that phosphorylate and activate their downstream target, p38 MAPK, on specific threonine and tyrosine residues. MKK3/6 plays roles in the regulation of cell cycle progression, cytokine- and stress-induced apoptosis, oncogenic transformation, and adult tissue regeneration. In addition, MKK6 plays a critical role in osteoclast survival in inflammatory disease while MKK3 is associated with tumor invasion, progression, and poor patient survival in glioma. Length = 283 |
| >gnl|CDD|185504 PTZ00184, PTZ00184, calmodulin; Provisional | Back alignment and domain information |
|---|
Score = 57.5 bits (139), Expect = 5e-10
Identities = 38/147 (25%), Positives = 73/147 (49%), Gaps = 9/147 (6%)
Query: 316 IVEYLPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAV-KNS 374
+ + L +E+ KE F D D +GT++ EL + +G TE +++ ++ V +
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 375 STLESLCENLP--------TKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEES 426
+ E L T ++++ E F+ D D + ++ +EL+ + LG L +
Sbjct: 61 NGTIDFPEFLTLMARKMKDTDSEEEIKEAFKVFDRDGNGFISAAELRHVMTNLGEKLTDE 120
Query: 427 EVNQYMEAGDIDGNGNIDSIEFVNLMT 453
EV++ + D+DG+G I+ EFV +M
Sbjct: 121 EVDEMIREADVDGDGQINYEEFVKMMM 147
|
Length = 149 |
| >gnl|CDD|173637 cd05059, PTKc_Tec_like, Catalytic domain of Tec-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 59.4 bits (144), Expect = 6e-10
Identities = 58/225 (25%), Positives = 101/225 (44%), Gaps = 26/225 (11%)
Query: 27 FGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNV 86
F + LG GQFGV +L + A K I + ++E+D I E ++ + LS PN+
Sbjct: 8 FLKELGSGQFGVVHL-GKWRGKIDVAIKMIREGA---MSEDDFI-EEAKVMMKLS-HPNL 61
Query: 87 VEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSM--- 143
V+ + + +V E G L + + + L + +VC +M
Sbjct: 62 VQLYGVCTKQRPIFIVTEYMANGCLLNYLRE---RKGKLGTEWLLDM--CSDVCEAMEYL 116
Query: 144 ---GVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYI---APEV 197
G +HRDL N + ++ ++KV+DFG A + Q Y G+ F + PEV
Sbjct: 117 ESNGFIHRDLAARN-CLVG--EDNVVKVSDFGLARYVLDDQ-YTSSQGTKFPVKWAPPEV 172
Query: 198 L-RRRYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQG 240
R+ + D+WS GV+++ + S G P+ + +++ G
Sbjct: 173 FDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSEVVESVSAG 217
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, some members contain the Tec homology (TH) domain, which contains proline-rich and zinc-binding regions. Tec kinases form the second largest subfamily of nRTKs and are expressed mainly by haematopoietic cells, although Tec and Bmx are also found in endothelial cells. B-cells express Btk and Tec, while T-cells express Itk, Txk, and Tec. Collectively, Tec kinases are expressed in a variety of myeloid cells such as mast cells, platelets, macrophages, and dendritic cells. Each Tec kinase shows a distinct cell-type pattern of expression. The function of Tec kinases in lymphoid cells have been studied extensively. They play important roles in the development, differentiation, maturation, regulation, survival, and function of B-cells and T-cells. Mutations in Btk cause the severe B-cell immunodeficiency, X-linked agammaglobulinaemia (XLA). Length = 256 |
| >gnl|CDD|173638 cd05065, PTKc_EphR_B, Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors | Back alignment and domain information |
|---|
Score = 58.7 bits (142), Expect = 1e-09
Identities = 56/221 (25%), Positives = 92/221 (41%), Gaps = 20/221 (9%)
Query: 71 RREIQIRLYLSGQ---PNVVEFKSTYEDETAVHVVMELCEGG--DLFDRIIAKGYNSERD 125
RR+ + GQ PN++ + V ++ E E G D F R G +
Sbjct: 49 RRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMIITEFMENGALDSFLRQ-NDGQFTVIQ 107
Query: 126 AATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQ---V 182
+LR I + M +HRDL N I + N + KV+DFG + E+
Sbjct: 108 LVGMLRGIAAGMKYLSEMNYVHRDLAARN---ILVNSNLVCKVSDFGLSRFLEDDTSDPT 164
Query: 183 YRDIVGSGFYI---APEVLR-RRYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAI 237
Y +G I APE + R++ D+WS G++++ ++S G P+W + + +AI
Sbjct: 165 YTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVINAI 224
Query: 238 LQGEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVL 278
Q D+ P + L+ KD R Q++
Sbjct: 225 EQ---DYRLPPPMDCPTALHQLMLDCWQKDRNARPKFGQIV 262
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion. EphBRs play important roles in synapse formation and plasticity, spine morphogenesis, axon guidance, and angiogenesis. In the intestinal epithelium, EphBRs are Wnt signaling target genes that control cell compartmentalization. They function as suppressors of color cancer progression. Length = 269 |
| >gnl|CDD|132967 cd06636, STKc_MAP4K4_6, Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6 | Back alignment and domain information |
|---|
Score = 58.5 bits (141), Expect = 2e-09
Identities = 46/175 (26%), Positives = 81/175 (46%), Gaps = 18/175 (10%)
Query: 66 ENDMIRREIQIRLYLSGQPNVVEF------KSTYEDETAVHVVMELCEGGDLFDRIIAKG 119
E + I+ EI + S N+ + KS + + +VME C G + D +
Sbjct: 55 EEEEIKLEINMLKKYSHHRNIATYYGAFIKKSPPGHDDQLWLVMEFCGAGSVTDLVKNTK 114
Query: 120 YNSERD--AATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLF 177
N+ ++ A + R I+ + H+ V+HRD+K +N + +NA +K+ DFG +
Sbjct: 115 GNALKEDWIAYICREILRGLAHLHAHKVIHRDIKGQN---VLLTENAEVKLVDFGVSAQL 171
Query: 178 EEGQVYRD-IVGSGFYIAPEVLR------RRYGKEIDIWSAGVILYILLSGVPPF 225
+ R+ +G+ +++APEV+ Y DIWS G+ + G PP
Sbjct: 172 DRTVGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPL 226
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K4 is also called Nck Interacting kinase (NIK). It facilitates the activation of the MAPKs, extracellular signal-regulated kinase (ERK) 1, ERK2, and c-Jun N-terminal kinase (JNK), by phosphorylating and activating MEKK1. MAP4K4 plays a role in tumor necrosis factor (TNF) alpha-induced insulin resistance. MAP4K4 silencing in skeletal muscle cells from type II diabetic patients restores insulin-mediated glucose uptake. MAP4K4, through JNK, also plays a broad role in cell motility, which impacts inflammation, homeostasis, as well as the invasion and spread of cancer. MAP4K4 is found to be highly expressed in most tumor cell lines relative to normal tissue. MAP4K6 (also called MINK for Misshapen/NIKs-related kinase) is activated after Ras induction and mediates activation of p38 MAPK. MAP4K6 plays a role in cell cycle arrest, cytoskeleton organization, cell adhesion, and cell motility. Length = 282 |
| >gnl|CDD|132980 cd06649, PKc_MEK2, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2 | Back alignment and domain information |
|---|
Score = 58.9 bits (142), Expect = 2e-09
Identities = 53/180 (29%), Positives = 87/180 (48%), Gaps = 32/180 (17%)
Query: 59 KPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAK 118
KP +R + I RE+Q+ L+ P +V F + + + + ME +GG L D+++
Sbjct: 43 KPAIR----NQIIRELQV-LHECNSPYIVGFYGAFYSDGEISICMEHMDGGSL-DQVL-- 94
Query: 119 GYNSERDAATVLRAIVNAVNVCHSMG---------VMHRDLKPENFSFISRDDNALLKVT 169
++A + I+ V++ G +MHRD+KP N SR + +K+
Sbjct: 95 -----KEAKRIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRGE---IKLC 146
Query: 170 DFG-SALLFEEGQVYRDIVGSGFYIAPEVLR-RRYGKEIDIWSAGVILYILLSG---VPP 224
DFG S L + + VG+ Y++PE L+ Y + DIWS G+ L L G +PP
Sbjct: 147 DFGVSGQLID--SMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPP 204
|
Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 331 |
| >gnl|CDD|185503 PTZ00183, PTZ00183, centrin; Provisional | Back alignment and domain information |
|---|
Score = 56.2 bits (136), Expect = 2e-09
Identities = 33/143 (23%), Positives = 71/143 (49%), Gaps = 9/143 (6%)
Query: 320 LPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNSST--- 376
L +++ + ++E F DTD +GT+ EL+ + +G + ++K ++ V +
Sbjct: 11 LTEDQKKEIREAFDLFDTDGSGTIDPKELKVAMRSLGFEPKKEEIKQMIADVDKDGSGKI 70
Query: 377 -----LESLCENLPTKEKQKLMEK-FREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQ 430
L+ + + L ++ ++ + K FR D D + ++L LK +LG + + E+ +
Sbjct: 71 DFEEFLDIMTKKLGERDPREEILKAFRLFDDDKTGKISLKNLKRVAKELGETITDEELQE 130
Query: 431 YMEAGDIDGNGNIDSIEFVNLMT 453
++ D +G+G I EF +M
Sbjct: 131 MIDEADRNGDGEISEEEFYRIMK 153
|
Length = 158 |
| >gnl|CDD|143372 cd07867, STKc_CDC2L6, Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6 | Back alignment and domain information |
|---|
Score = 58.5 bits (141), Expect = 2e-09
Identities = 55/206 (26%), Positives = 86/206 (41%), Gaps = 50/206 (24%)
Query: 128 TVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRD-DNALLKVTDFGSALLFEEG-QVYRD 185
++L I++ ++ H+ V+HRDLKP N + + +K+ D G A LF + D
Sbjct: 112 SLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLAD 171
Query: 186 ---IVGSGFYIAPEVL--RRRYGKEIDIWSAGVILYILLSGVPPF--------------- 225
+V + +Y APE+L R Y K IDIW+ G I LL+ P F
Sbjct: 172 LDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPFHH 231
Query: 226 -----------------WAETKKGTYDAILQGEIDFDTDPWPSI-----------SSTAK 257
W + +K LQ + T S+ S
Sbjct: 232 DQLDRIFSVMGFPADKDWEDIRKMPEYPTLQKDFRRTTYANSSLIKYMEKHKVKPDSKVF 291
Query: 258 DLVRRMLTKDPKRRITAAQVLEHPWL 283
L++++LT DP +RIT+ Q L+ P+
Sbjct: 292 LLLQKLLTMDPTKRITSEQALQDPYF 317
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as the caspase-processed CDK11(p46). CDK11(p110), CDK11(p58), and CDK11(p46)do not belong to this subfamily. CDC2L6 is an associated protein of Mediator, a multiprotein complex that provides a platform to connect transcriptional and chromatin regulators and cofactors, in order to activate and mediate RNA polymerase II transcription. CDC2L6 is localized mainly in the nucleus amd exerts an opposing effect to CDK8 in VP16-dependent transcriptional activation by being a negative regulator. Length = 317 |
| >gnl|CDD|133216 cd05085, PTKc_Fer, Catalytic domain of the Protein Tyrosine Kinase, Fer | Back alignment and domain information |
|---|
Score = 57.7 bits (139), Expect = 2e-09
Identities = 58/226 (25%), Positives = 98/226 (43%), Gaps = 32/226 (14%)
Query: 30 MLGRGQFGVSYLCTENSTNRPYACKS----IAKKPKMRLAENDMIRREIQIRLYLSGQPN 85
+LG+G FG + T P A K+ + ++ K++ I ++ PN
Sbjct: 2 LLGKGNFGEVFKGTLKDKT-PVAVKTCKEDLPQELKIKFLSEARILKQYD-------HPN 53
Query: 86 VVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVN---VCHS 142
+V+ +++VMEL GGD + K E +++ ++A S
Sbjct: 54 IVKLIGVCTQRQPIYIVMELVPGGDFLSFLRKK--KDELKTKQLVKFALDAAAGMAYLES 111
Query: 143 MGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGF------YIAPE 196
+HRDL N +N +LK++DFG + E+ +Y SG + APE
Sbjct: 112 KNCIHRDLAARNCLV---GENNVLKISDFGMSRQ-EDDGIYSS---SGLKQIPIKWTAPE 164
Query: 197 VLRR-RYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQG 240
L RY E D+WS G++L+ S GV P+ T + + + +G
Sbjct: 165 ALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQAREQVEKG 210
|
Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-cell interactions mediated by adherens junctions and focal adhesions. Fer kinase also regulates cell cycle progression in malignant cells. Length = 250 |
| >gnl|CDD|173639 cd05066, PTKc_EphR_A, Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors | Back alignment and domain information |
|---|
Score = 58.0 bits (140), Expect = 2e-09
Identities = 60/226 (26%), Positives = 101/226 (44%), Gaps = 24/226 (10%)
Query: 29 RMLGRGQFG-VSY--LCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQ-- 83
+++G G+FG V L P A K+ ++ + RR+ + GQ
Sbjct: 10 KVIGAGEFGEVCSGRLKLPGKREIPVAIKT------LKAGYTEKQRRDFLSEASIMGQFD 63
Query: 84 -PNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAK--GYNSERDAATVLRAIVNAVNVC 140
PN++ + V +V E E G L D + K G + +LR I + +
Sbjct: 64 HPNIIHLEGVVTKSKPVMIVTEYMENGSL-DAFLRKHDGQFTVIQLVGMLRGIASGMKYL 122
Query: 141 HSMGVMHRDLKPENFSFISRDDNALLKVTDFG-SALLFEEGQVYRDIVGSGFYI---APE 196
MG +HRDL N I + N + KV+DFG S +L ++ + G I APE
Sbjct: 123 SDMGYVHRDLAARN---ILVNSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPE 179
Query: 197 VLR-RRYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQG 240
+ R++ D+WS G++++ ++S G P+W + + AI +G
Sbjct: 180 AIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQDVIKAIEEG 225
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. EphARs and ephrin-A ligands are expressed in multiple areas of the developing brain, especially in the retina and tectum. They are part of a system controlling retinotectal mapping. Length = 267 |
| >gnl|CDD|173746 cd07850, STKc_JNK, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase | Back alignment and domain information |
|---|
Score = 58.6 bits (142), Expect = 2e-09
Identities = 44/137 (32%), Positives = 67/137 (48%), Gaps = 17/137 (12%)
Query: 85 NVVEFKSTYEDETAVHVVME-----LCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNV 139
NV + + E+ V++VME LC+ +I + ER + +L ++ +
Sbjct: 82 NVFTPQKSLEEFQDVYLVMELMDANLCQ-------VIQMDLDHER-MSYLLYQMLCGIKH 133
Query: 140 CHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEV-L 198
HS G++HRDLKP N I + LK+ DFG A + V + +Y APEV L
Sbjct: 134 LHSAGIIHRDLKPSN---IVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL 190
Query: 199 RRRYGKEIDIWSAGVIL 215
Y + +DIWS G I+
Sbjct: 191 GMGYKENVDIWSVGCIM 207
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3) that are alternatively spliced to produce at least 10 isoforms. JNKs are specifically activated by the MAPK kinases MKK4 and MKK7, which are in turn activated by upstream MAPK kinase kinases as a result of different stimuli including stresses such as ultraviolet (UV) irradiation, hyperosmolarity, heat shock, or cytokines. JNKs activate a large number of different substrates based on specific stimulus, cell type, and cellular condition, and may be implicated in seemingly contradictory functions. Length = 353 |
| >gnl|CDD|227455 COG5126, FRQ1, Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only] | Back alignment and domain information |
|---|
Score = 55.0 bits (133), Expect = 4e-09
Identities = 31/95 (32%), Positives = 49/95 (51%), Gaps = 2/95 (2%)
Query: 383 NLPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGN 442
L ++ Q+L E F+ D D+ + +EL L LG E+E+N+ E D GN
Sbjct: 13 QLTEEQIQELKEAFQLFDRDSDGLIDRNELGKILRSLGFNPSEAEINKLFEEID-AGNET 71
Query: 443 IDSIEFVNLMTDIYK-LETPELLEKAFQYLDKNSD 476
+D EF+ +M+ K + E L +AF+ DK+ D
Sbjct: 72 VDFPEFLTVMSVKLKRGDKEEELREAFKLFDKDHD 106
|
Length = 160 |
| >gnl|CDD|173644 cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Score = 57.2 bits (138), Expect = 4e-09
Identities = 59/212 (27%), Positives = 91/212 (42%), Gaps = 34/212 (16%)
Query: 29 RMLGRGQFGVSYLC----TENSTNRPYACKSIAKKPKMRLAENDMIRREIQI--RLYLSG 82
R LG G FG LC ++T A KS+ KP+ +++EI+I LY
Sbjct: 10 RDLGEGHFGKVELCRYDPEGDNTGEQVAVKSL--KPESGGNHIADLKKEIEILRNLY--- 64
Query: 83 QPNVVEFKSTYEDE--TAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVN-AVNV 139
N+V++K ++ + ++ME G L K Y L+ + AV +
Sbjct: 65 HENIVKYKGICTEDGGNGIKLIMEFLPSGSL------KEYLPRNKNKINLKQQLKYAVQI 118
Query: 140 CHSMGVM------HRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYR----DIVGS 189
C M + HRDL N + + +K+ DFG E + Y D+
Sbjct: 119 CKGMDYLGSRQYVHRDLAARN---VLVESEHQVKIGDFGLTKAIETDKEYYTVKDDLDSP 175
Query: 190 GFYIAPEVL-RRRYGKEIDIWSAGVILYILLS 220
F+ APE L + ++ D+WS GV LY LL+
Sbjct: 176 VFWYAPECLIQSKFYIASDVWSFGVTLYELLT 207
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak1 is widely expressed in many tissues. Many cytokines are dependent on Jak1 for signaling, including those that use the shared receptor subunits common gamma chain (IL-2, IL-4, IL-7, IL-9, IL-15, IL-21) and gp130 (IL-6, IL-11, oncostatin M, G-CSF, and IFNs, among others). The many varied interactions of Jak1 and its ubiquitous expression suggest many biological roles. Jak1 is important in neurological development, as well as in lymphoid development and function. It also plays a role in the pathophysiology of cardiac hypertrophy and heart failure. A mutation in the ATP-binding site of Jak1 was identified in a human uterine leiomyosarcoma cell line, resulting in defective cytokine induction and antigen presentation, thus allowing the tumor to evade the immune system. Length = 284 |
| >gnl|CDD|133243 cd05112, PTKc_Itk, Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase | Back alignment and domain information |
|---|
Score = 56.1 bits (135), Expect = 8e-09
Identities = 57/200 (28%), Positives = 95/200 (47%), Gaps = 25/200 (12%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFK 90
+G GQFG+ +L R A K+I + ++E D I E Q+ + LS P +V+
Sbjct: 12 IGSGQFGLVWLGYWLE-KRKVAIKTIREGA---MSEEDFIE-EAQVMMKLS-HPKLVQLY 65
Query: 91 STYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMG------ 144
+ + + +V E E G L D + A+ + T+L ++VC M
Sbjct: 66 GVCTERSPICLVFEFMEHGCLSDYLRAQ--RGKFSQETLLGM---CLDVCEGMAYLESSN 120
Query: 145 VMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGF---YIAPEVLR-R 200
V+HRDL N + +N ++KV+DFG + Q Y G+ F + +PEV
Sbjct: 121 VIHRDLAARN-CLVG--ENQVVKVSDFGMTRFVLDDQ-YTSSTGTKFPVKWSSPEVFSFS 176
Query: 201 RYGKEIDIWSAGVILYILLS 220
+Y + D+WS GV+++ + S
Sbjct: 177 KYSSKSDVWSFGVLMWEVFS 196
|
Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Itk contains the Tec homology (TH) domain containing one proline-rich region and a zinc-binding region. Tec kinases are expressed mainly by haematopoietic cells. Itk is expressed in T-cells and mast cells, and is important in their development and differentiation. Of the three Tec kinases expressed in T-cells, Itk plays the predominant role in T-cell receptor (TCR) signaling. It is activated by phosphorylation upon TCR crosslinking and is involved in the pathway resulting in phospholipase C-gamma1 activation and actin polymerization. It also plays a role in the downstream signaling of the T-cell costimulatory receptor CD28, the T-cell surface receptor CD2, and the chemokine receptor CXCR4. In addition, Itk is crucial for the development of T-helper(Th)2 effector responses. Length = 256 |
| >gnl|CDD|173658 cd05114, PTKc_Tec_Rlk, Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase | Back alignment and domain information |
|---|
Score = 55.6 bits (134), Expect = 1e-08
Identities = 58/225 (25%), Positives = 103/225 (45%), Gaps = 26/225 (11%)
Query: 27 FGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNV 86
F + LG GQFGV +L + + A K+I + ++E D I E ++ + LS P +
Sbjct: 8 FMKELGSGQFGVVHLGKWRAQIK-VAIKAINEGA---MSEEDFI-EEAKVMMKLS-HPKL 61
Query: 87 VEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSM--- 143
V+ + +++V E E G L + + + +D +L ++ +VC M
Sbjct: 62 VQLYGVCTQQKPLYIVTEFMENGCLLNYLRQRQGKLSKD---MLLSMCQ--DVCEGMEYL 116
Query: 144 ---GVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYI---APEV 197
+HRDL N +S ++KV+DFG + + Y G+ F + PEV
Sbjct: 117 ERNSFIHRDLAARN-CLVS--STGVVKVSDFGMTRYVLDDE-YTSSSGAKFPVKWSPPEV 172
Query: 198 LR-RRYGKEIDIWSAGVILY-ILLSGVPPFWAETKKGTYDAILQG 240
+Y + D+WS GV+++ + G PF ++ + I +G
Sbjct: 173 FNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYEVVEMISRG 217
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. Instead of PH, Rlk contains an N-terminal cysteine-rich region. In addition to PH, Tec also contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Tec is more widely-expressed than other Tec subfamily kinases. It is found in endothelial cells, both B- and T-cells, and a variety of myeloid cells including mast cells, erythroid cells, platelets, macrophages and neutrophils. Rlk is expressed in T-cells and mast cell lines. Tec and Rlk are both key components of T-cell receptor (TCR) signaling. They are important in TCR-stimulated proliferation, IL-2 production and phopholipase C-gamma1 activation. Length = 256 |
| >gnl|CDD|133248 cd05148, PTKc_Srm_Brk, Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk | Back alignment and domain information |
|---|
Score = 54.7 bits (132), Expect = 2e-08
Identities = 57/228 (25%), Positives = 87/228 (38%), Gaps = 33/228 (14%)
Query: 28 GRMLGRGQFGVSYLCTEN--STNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPN 85
R LG G FG + E A K + ++ ++E+Q L +
Sbjct: 11 ERKLGSGYFGEVW---EGLWKNRVRVAIKILKSDDLLKQ---QDFQKEVQALKRLR-HKH 63
Query: 86 VVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMG- 144
++ + V+++ EL E G L + + E V I A V M
Sbjct: 64 LISLFAVCSVGEPVYIITELMEKGSLLAFL----RSPEGQVLPVASLIDMACQVAEGMAY 119
Query: 145 -----VMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYI-----A 194
+HRDL N I ++ + KV DFG A L +E VY + S I A
Sbjct: 120 LEEQNSIHRDLAARN---ILVGEDLVCKVADFGLARLIKE-DVY---LSSDKKIPYKWTA 172
Query: 195 PEVL-RRRYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQG 240
PE + + D+WS G++LY + + G P+ YD I G
Sbjct: 173 PEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHEVYDQITAG 220
|
Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Srm and Brk however, lack the N-terminal myristylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Brk has been found to be overexpressed in a majority of breast tumors. Length = 261 |
| >gnl|CDD|223009 PHA03211, PHA03211, serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Score = 55.7 bits (134), Expect = 2e-08
Identities = 56/203 (27%), Positives = 83/203 (40%), Gaps = 47/203 (23%)
Query: 127 ATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQ----V 182
V R +++A++ H G++HRD+K EN ++ ++ L DFG+A F G
Sbjct: 263 TAVARQLLSAIDYIHGEGIIHRDIKTENV-LVNGPEDICLG--DFGAA-CFARGSWSTPF 318
Query: 183 YRDIVGSGFYIAPEVLR-RRYGKEIDIWSAG-VILYILLSGVPPFWA--ETKKGTYDA-- 236
+ I G+ APEVL Y +DIWSAG VI + F A ++ YDA
Sbjct: 319 HYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQI 378
Query: 237 ---ILQGEIDFDTDP---------------------------WP---SISSTAKDLVRRM 263
I Q ++ D P W + + LV R
Sbjct: 379 LRIIRQAQVHVDEFPQHAGSRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRA 438
Query: 264 LTKDPKRRITAAQVLEHPWLRES 286
LT D RR +AA++L P +
Sbjct: 439 LTFDGARRPSAAELLRLPLFQSK 461
|
Length = 461 |
| >gnl|CDD|165476 PHA03210, PHA03210, serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Score = 55.5 bits (133), Expect = 3e-08
Identities = 35/95 (36%), Positives = 55/95 (57%), Gaps = 6/95 (6%)
Query: 129 VLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDI-- 186
+++ ++ AV H ++HRD+K EN F++ D +L DFG+A+ FE+ + D
Sbjct: 272 IMKQLLCAVEYIHDKKLIHRDIKLENI-FLNCDGKIVLG--DFGTAMPFEKEREAFDYGW 328
Query: 187 VGSGFYIAPEVLRRRYGKEI-DIWSAGVILYILLS 220
VG+ +PE+L EI DIWS G+IL +LS
Sbjct: 329 VGTVATNSPEILAGDGYCEITDIWSCGLILLDMLS 363
|
Length = 501 |
| >gnl|CDD|133187 cd05056, PTKc_FAK, Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase | Back alignment and domain information |
|---|
Score = 54.4 bits (131), Expect = 4e-08
Identities = 67/270 (24%), Positives = 100/270 (37%), Gaps = 36/270 (13%)
Query: 19 EDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRRE-IQIR 77
ED+ L GR +G GQFG Y S IA K RE
Sbjct: 6 EDITL----GRCIGEGQFGDVYQGVYMSPENE----KIAVAVKTCKNCTSPSVREKFLQE 57
Query: 78 LYLSGQ---PNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIV 134
Y+ Q P++V+ + V +VMEL G+L + + + I+
Sbjct: 58 AYIMRQFDHPHIVKLIGVITEN-PVWIVMELAPLGEL-----RSYLQVNKYSLDLASLIL 111
Query: 135 NAVNVC------HSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVG 188
+ + S +HRD+ N S D +K+ DFG + E+ Y+ G
Sbjct: 112 YSYQLSTALAYLESKRFVHRDIAARNVLVSSPD---CVKLGDFGLSRYLEDESYYKASKG 168
Query: 189 SG--FYIAPEVLR-RRYGKEIDIWSAGVILY-ILLSGVPPFWAETKKGTYDAILQGEIDF 244
++APE + RR+ D+W GV ++ IL+ GV PF I GE
Sbjct: 169 KLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDVIGRIENGE--- 225
Query: 245 DTDPWPSISSTA-KDLVRRMLTKDPKRRIT 273
P P L+ + DP +R
Sbjct: 226 -RLPMPPNCPPTLYSLMTKCWAYDPSKRPR 254
|
Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions and at growth factor receptors. Through diverse molecular interactions, FAK functions as a biosensor or integrator to control cell motility. It is a key regulator of cell survival, proliferation, migration and invasion, and thus plays an important role in the development and progression of cancer. Src binds to autophosphorylated FAK forming the FAK-Src dual kinase complex, which is activated in a wide variety of tumor cells and generates signals promoting growth and metastasis. FAK is being developed as a target for cancer therapy. Length = 270 |
| >gnl|CDD|165478 PHA03212, PHA03212, serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Score = 55.0 bits (132), Expect = 4e-08
Identities = 51/193 (26%), Positives = 89/193 (46%), Gaps = 21/193 (10%)
Query: 34 GQFGVSYLCTENSTNRPYACKSIAKKPKMR--LAENDMIRREIQIRLYLSGQPNVVEFKS 91
G G ++ C +N T C+ + K R A I R I P++++ K
Sbjct: 103 GAEGFAFACIDNKT-----CEHVVIKAGQRGGTATEAHILRAIN-------HPSIIQLKG 150
Query: 92 TYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLK 151
T+ +++ + DL+ + AK + D + R+++ A+ H ++HRD+K
Sbjct: 151 TFTYNKFTCLILPRYKT-DLYCYLAAKRNIAICDILAIERSVLRAIQYLHENRIIHRDIK 209
Query: 152 PENFSFISRDDNALLKVTDFGSALLFEE--GQVYRDIVGSGFYIAPEVLRRR-YGKEIDI 208
EN FI+ + + DFG+A + Y G+ APE+L R YG +DI
Sbjct: 210 AENI-FINHPGDVC--LGDFGAACFPVDINANKYYGWAGTIATNAPELLARDPYGPAVDI 266
Query: 209 WSAGVILYILLSG 221
WSAG++L+ + +
Sbjct: 267 WSAGIVLFEMATC 279
|
Length = 391 |
| >gnl|CDD|133199 cd05068, PTKc_Frk_like, Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 54.0 bits (130), Expect = 4e-08
Identities = 63/223 (28%), Positives = 97/223 (43%), Gaps = 25/223 (11%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVE 88
R LG GQFG + N+T P A K++ KP + D + E QI L P +++
Sbjct: 12 RKLGAGQFGEVWEGLWNNTT-PVAVKTL--KPGT-MDPKDFLA-EAQIMKKLR-HPKLIQ 65
Query: 89 FKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVM-- 146
+ E +++V EL + G L + + A + + I A V M +
Sbjct: 66 LYAVCTLEEPIYIVTELMKYGSLLEYL----QGGAGRALKLPQLIDMAAQVASGMAYLEA 121
Query: 147 ----HRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYI---APEVLR 199
HRDL N + +N + KV DFG A + +E +Y G+ F I APE
Sbjct: 122 QNYIHRDLAARN---VLVGENNICKVADFGLARVIKE-DIYEAREGAKFPIKWTAPEAAL 177
Query: 200 -RRYGKEIDIWSAGVILY-ILLSGVPPFWAETKKGTYDAILQG 240
R+ + D+WS G++L I+ G P+ T + QG
Sbjct: 178 YNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAEVLQQVDQG 220
|
Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Frk, also known as Rak, is specifically expressed in liver, lung, kidney, intestine, mammary glands, and the islets of Langerhans. Rodent homologs were previously referred to as GTK (gastrointestinal tyr kinase), BSK (beta-cell Src-like kinase), or IYK (intestinal tyr kinase). Studies in mice reveal that Frk is not essential for viability. It plays a role in the signaling that leads to cytokine-induced beta-cell death in Type I diabetes. It also regulates beta-cell number during embryogenesis and early in life. Length = 261 |
| >gnl|CDD|173667 cd05576, STKc_RPK118_like, Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins | Back alignment and domain information |
|---|
Score = 53.7 bits (129), Expect = 4e-08
Identities = 54/207 (26%), Positives = 87/207 (42%), Gaps = 19/207 (9%)
Query: 82 GQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCH 141
PN+V E +V +V++ EGG L+ I E +V A++ H
Sbjct: 43 CVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHISKFLNIPEECVKRWAAEMVVALDALH 102
Query: 142 SMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLRRR 201
G++ RDL P N I DD +++T F E+ + V Y APEV
Sbjct: 103 REGIVCRDLNPNN---ILLDDRGHIQLTYFSRWSEVED-SCDGEAV-ENMYCAPEVGGIS 157
Query: 202 YGKE-IDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLV 260
E D WS G IL+ LL+G +T + + + + W +S A+ L+
Sbjct: 158 EETEACDWWSLGAILFELLTG------KTLVECHPSGINTHTTLNIPEW--VSEEARSLL 209
Query: 261 RRMLTKDPKRRITAA-----QVLEHPW 282
+++L +P R+ A + HP+
Sbjct: 210 QQLLQFNPTERLGAGVAGVEDIKSHPF 236
|
Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phosphate (SPP), a lipid messenger involved in many cellular events. RPK118 may be involved in transmitting SPP-mediated signaling. RPK118 also binds the antioxidant peroxiredoxin-3 (PRDX3). RPK118 may be involved in the transport of PRDX3 from the cytoplasm to its site of function in the mitochondria. Length = 237 |
| >gnl|CDD|133171 cd05039, PTKc_Csk_like, Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 53.2 bits (128), Expect = 7e-08
Identities = 54/208 (25%), Positives = 87/208 (41%), Gaps = 37/208 (17%)
Query: 27 FGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMR---LAEND-MIRREIQIRLYLSG 82
G +G+G+FG L + A K + LAE M
Sbjct: 10 LGATIGKGEFGDVMLGD--YRGQKVAVKCLKDDSTAAQAFLAEASVMTTLR--------- 58
Query: 83 QPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHS 142
PN+V+ +++V E G L D + ++G R T+ + + A++VC
Sbjct: 59 HPNLVQLLGVVLQGNPLYIVTEYMAKGSLVDYLRSRG----RAVITLAQQLGFALDVCEG 114
Query: 143 M------GVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYI--- 193
M +HRDL N +S D A KV+DFG L +E +D +
Sbjct: 115 MEYLEEKNFVHRDLAARNV-LVSEDLVA--KVSDFG---LAKEASQGQD--SGKLPVKWT 166
Query: 194 APEVLR-RRYGKEIDIWSAGVILYILLS 220
APE LR +++ + D+WS G++L+ + S
Sbjct: 167 APEALREKKFSTKSDVWSFGILLWEIYS 194
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As negative regulators of Src kinases, Csk and Chk play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Length = 256 |
| >gnl|CDD|143374 cd07869, STKc_PFTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase | Back alignment and domain information |
|---|
Score = 53.5 bits (128), Expect = 7e-08
Identities = 51/193 (26%), Positives = 76/193 (39%), Gaps = 45/193 (23%)
Query: 130 LRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFE-EGQVYRDIVG 188
L ++ ++ H ++HRDLKP+N IS D LK+ DFG A Y + V
Sbjct: 109 LFQLLRGLSYIHQRYILHRDLKPQNL-LIS--DTGELKLADFGLARAKSVPSHTYSNEVV 165
Query: 189 SGFYIAPEVL--RRRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDF-- 244
+ +Y P+VL Y +D+W G I ++ GV F G D Q E F
Sbjct: 166 TLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAF-----PGMKDIQDQLERIFLV 220
Query: 245 ----DTDPWPSISST----------------------------AKDLVRRMLTKDPKRRI 272
+ D WP + S A+DL ++L PK R+
Sbjct: 221 LGTPNEDTWPGVHSLPHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRL 280
Query: 273 TAAQVLEHPWLRE 285
+A L H + +
Sbjct: 281 SAQAALSHEYFSD 293
|
Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 and is inhibited by the p21 cell cycle inhibitor. It has also been shown to interact with the membrane-associated cyclin Y, which recruits the protein to the plasma membrane. Length = 303 |
| >gnl|CDD|173626 cd05034, PTKc_Src_like, Catalytic domain of Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 53.1 bits (128), Expect = 8e-08
Identities = 62/220 (28%), Positives = 95/220 (43%), Gaps = 17/220 (7%)
Query: 28 GRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVV 87
R LG GQFG ++ T N T A K++ K M +E QI L +V
Sbjct: 11 ERKLGAGQFGEVWMGTWNGTT-KVAVKTL-KPGTMSPEA---FLQEAQIMKKLR-HDKLV 64
Query: 88 EFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRA--IVNAVNVCHSMGV 145
+ + +E +++V E G L D + + R V A I + S
Sbjct: 65 QLYAVCSEEEPIYIVTEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESRNY 124
Query: 146 MHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYI---APE-VLRRR 201
+HRDL N I +N + K+ DFG A L E+ + Y G+ F I APE R
Sbjct: 125 IHRDLAARN---ILVGENLVCKIADFGLARLIEDDE-YTAREGAKFPIKWTAPEAANYGR 180
Query: 202 YGKEIDIWSAGVILY-ILLSGVPPFWAETKKGTYDAILQG 240
+ + D+WS G++L I+ G P+ T + + + +G
Sbjct: 181 FTIKSDVWSFGILLTEIVTYGRVPYPGMTNREVLEQVERG 220
|
Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, and Lyn show a limited expression pattern. Length = 261 |
| >gnl|CDD|133202 cd05071, PTKc_Src, Catalytic domain of the Protein Tyrosine Kinase, Src | Back alignment and domain information |
|---|
Score = 52.7 bits (126), Expect = 1e-07
Identities = 71/256 (27%), Positives = 112/256 (43%), Gaps = 33/256 (12%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSI---AKKPKMRLAENDM---IRREIQIRLYLSGQP 84
LG+G FG ++ T N T R A K++ P+ L E + +R E ++LY
Sbjct: 14 LGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYA---- 68
Query: 85 NVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRA--IVNAVNVCHS 142
VV E +++V E G L D + + R V A I + +
Sbjct: 69 -VVS-------EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER 120
Query: 143 MGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGF---YIAPE-VL 198
M +HRDL+ N I +N + KV DFG A L E+ + Y G+ F + APE L
Sbjct: 121 MNYVHRDLRAAN---ILVGENLVCKVADFGLARLIEDNE-YTARQGAKFPIKWTAPEAAL 176
Query: 199 RRRYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAK 257
R+ + D+WS G++L L + G P+ + D + +G + P +
Sbjct: 177 YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG---YRMPCPPECPESLH 233
Query: 258 DLVRRMLTKDPKRRIT 273
DL+ + K+P+ R T
Sbjct: 234 DLMCQCWRKEPEERPT 249
|
Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Src also play a role in regulating cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Elevated levels of Src kinase activity have been reported in a variety of human cancers. Several inhibitors of Src have been developed as anti-cancer drugs. Src is also implicated in acute inflammatory responses and osteoclast function. Length = 262 |
| >gnl|CDD|133186 cd05055, PTKc_PDGFR, Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors | Back alignment and domain information |
|---|
Score = 52.9 bits (127), Expect = 1e-07
Identities = 54/218 (24%), Positives = 88/218 (40%), Gaps = 31/218 (14%)
Query: 27 FGRMLGRGQFGVSYLCTENSTNRPYACKSIAK---KPKMRLAENDMIRREIQIRLYLSGQ 83
FG+ LG G FG T ++ A +A KP +E + + E++I +L
Sbjct: 39 FGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNH 98
Query: 84 PNVVEFKSTYEDETAVHVVMELCEGGDLFD--RIIAKGYNSERDAATVLRAIVNAVNVCH 141
N+V + V+ E C GDL + R + + + D + + +
Sbjct: 99 ENIVNLLGACTIGGPILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLA 158
Query: 142 SMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYI-------- 193
S +HRDL N + ++K+ DFG A RDI+ Y+
Sbjct: 159 SKNCIHRDLAARN---VLLTHGKIVKICDFGLA---------RDIMNDSNYVVKGNARLP 206
Query: 194 ----APE-VLRRRYGKEIDIWSAGVILYILLS-GVPPF 225
APE + Y E D+WS G++L+ + S G P+
Sbjct: 207 VKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPY 244
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR subfamily receptors are important in the development of a variety of cells. PDGFRs are expressed in a many cells including fibroblasts, neurons, endometrial cells, mammary epithelial cells, and vascular smooth muscle cells. PDGFR signaling is critical in normal embryonic development, angiogenesis, and wound healing. PDGFRs transduce mitogenic signals for connective tissue cells and are important for cell shape and motility. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. Mammalian FLT3 plays an important role in the survival, proliferation, and differentiation of stem cells. Length = 302 |
| >gnl|CDD|173633 cd05052, PTKc_Abl, Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase | Back alignment and domain information |
|---|
Score = 52.5 bits (126), Expect = 1e-07
Identities = 59/232 (25%), Positives = 100/232 (43%), Gaps = 28/232 (12%)
Query: 20 DVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAE---NDMIRREIQI 76
D+ + + LG GQ+G Y + A K++ K+ M + E + +EI+
Sbjct: 7 DITMKH----KLGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIK- 60
Query: 77 RLYLSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLR---AI 133
PN+V+ E +++ E G+L D + E +A +L I
Sbjct: 61 ------HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECN-RQEVNAVVLLYMATQI 113
Query: 134 VNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYI 193
+A+ +HRDL N + +N L+KV DFG + L G Y G+ F I
Sbjct: 114 SSAMEYLEKKNFIHRDLAARN-CLVG--ENHLVKVADFGLSRLM-TGDTYTAHAGAKFPI 169
Query: 194 ---APEVLR-RRYGKEIDIWSAGVILY-ILLSGVPPFWAETKKGTYDAILQG 240
APE L ++ + D+W+ GV+L+ I G+ P+ Y+ + +G
Sbjct: 170 KWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKG 221
|
Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays a role in cell proliferation and survival. In response to DNA damage or oxidative stress, Abl is transported to the nucleus where it induces apoptosis. In chronic myelogenous leukemia (CML) patients, an aberrant translocation results in the replacement of the first exon of Abl with the BCR (breakpoint cluster region) gene. The resulting BCR-Abl fusion protein is constitutively active and associates into tetramers, resulting in a hyperactive kinase sending a continuous signal. This leads to uncontrolled proliferation, morphological transformation and anti-apoptotic effects. BCR-Abl is the target of selective inhibitors, such as imatinib (Gleevec), used in the treatment of CML. Abl2, also known as ARG (Abelson-related gene), is thought to play a cooperative role with Abl in the proper development of the nervous system. The Tel-ARG fusion protein, resulting from reciprocal translocation between chromosomes 1 and 12, is associated with acute myeloid leukemia (AML). The TEL gene is a frequent fusion partner of other tyr kinase oncogenes, including Tel/Abl, Tel/PDGFRbeta, and Tel/Jak2, found in patients with leukemia and myeloproliferative disorders. Length = 263 |
| >gnl|CDD|133214 cd05083, PTKc_Chk, Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase | Back alignment and domain information |
|---|
Score = 51.9 bits (124), Expect = 2e-07
Identities = 47/185 (25%), Positives = 88/185 (47%), Gaps = 28/185 (15%)
Query: 99 VHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSM------GVMHRDLKP 152
+++VMEL G+L + + +G R +V++ + +++V M ++HRDL
Sbjct: 73 LYIVMELMSKGNLVNFLRTRG----RALVSVIQLLQFSLDVAEGMEYLESKKLVHRDLAA 128
Query: 153 ENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGF----YIAPEVLR-RRYGKEID 207
N +S D A KV+DFG A +V V + + APE L+ +++ + D
Sbjct: 129 RNI-LVSEDGVA--KVSDFGLA------RVGSMGVDNSKLPVKWTAPEALKHKKFSSKSD 179
Query: 208 IWSAGVILYILLS-GVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTK 266
+WS GV+L+ + S G P+ + K + + +G + +P + L+
Sbjct: 180 VWSYGVLLWEVFSYGRAPYPKMSLKEVKECVEKG---YRMEPPEGCPADVYVLMTSCWET 236
Query: 267 DPKRR 271
+PK+R
Sbjct: 237 EPKKR 241
|
Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As a negative regulator of Src kinases, Chk may play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Chk is expressed in brain and hematopoietic cells. Studies in mice reveal that Chk is not functionally redundant with Csk and that it plays an important role as a regulator of immune responses. Chk also plays a role in neural differentiation in a manner independent of Src by enhancing Mapk activation via Ras-mediated signaling. Length = 254 |
| >gnl|CDD|165473 PHA03207, PHA03207, serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Score = 52.5 bits (126), Expect = 2e-07
Identities = 39/129 (30%), Positives = 63/129 (48%), Gaps = 9/129 (6%)
Query: 110 DLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVT 169
DLF + G A T+ R ++ A+ H G++HRD+K EN F+ +NA+L
Sbjct: 171 DLFTYVDRSGPLPLEQAITIQRRLLEALAYLHGRGIIHRDVKTENI-FLDEPENAVLG-- 227
Query: 170 DFGSALLFEEG----QVYRDIVGSGFYIAPEVLR-RRYGKEIDIWSAGVILYILLSGVPP 224
DFG+A + Q Y G+ +PE+L Y + DIWSAG++L+ +
Sbjct: 228 DFGAACKLDAHPDTPQCY-GWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVT 286
Query: 225 FWAETKKGT 233
+ + K +
Sbjct: 287 LFGKQVKSS 295
|
Length = 392 |
| >gnl|CDD|133212 cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Score = 51.7 bits (124), Expect = 3e-07
Identities = 60/215 (27%), Positives = 92/215 (42%), Gaps = 31/215 (14%)
Query: 24 HYFFGRMLGRGQFGVSYLCT----ENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLY 79
H F + LG+G FG LC +++T A K + L + REI+I
Sbjct: 5 HLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRD---FEREIEILKS 61
Query: 80 LSGQPNVVEFKST-YE-DETAVHVVMELCEGGDLFDRIIAKGYNSER-DAATVLRAIVNA 136
L N+V++K Y + +VME G L D + + ER D +L + A
Sbjct: 62 LQHD-NIVKYKGVCYSAGRRNLRLVMEYLPYGSLRDYLQK---HRERLDHRKLL---LYA 114
Query: 137 VNVCHSMGVM------HRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSG 190
+C M + HRDL N I + +K+ DFG + + + Y + G
Sbjct: 115 SQICKGMEYLGSKRYVHRDLATRN---ILVESENRVKIGDFGLTKVLPQDKEYYKVREPG 171
Query: 191 ----FYIAPEVL-RRRYGKEIDIWSAGVILYILLS 220
F+ APE L ++ D+WS GV+LY L +
Sbjct: 172 ESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 206
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 284 |
| >gnl|CDD|133189 cd05058, PTKc_Met_Ron, Catalytic domain of the Protein Tyrosine Kinases, Met and Ron | Back alignment and domain information |
|---|
Score = 51.3 bits (123), Expect = 3e-07
Identities = 58/223 (26%), Positives = 93/223 (41%), Gaps = 46/223 (20%)
Query: 29 RMLGRGQFGVSY---LCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPN 85
R++G+G FG Y L + A KS+ + + E ++ I ++ + PN
Sbjct: 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQ-FLKEGIIMKDF--SHPN 57
Query: 86 VVEFKS-TYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMG 144
V+ E + VV+ + GDL + I SE TV I + V M
Sbjct: 58 VLSLLGICLPSEGSPLVVLPYMKHGDLRNFI-----RSETHNPTVKDLIGFGLQVAKGME 112
Query: 145 VM------HRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFY------ 192
+ HRDL N D++ +KV DFG A RDI +Y
Sbjct: 113 YLASKKFVHRDLAARNCML---DESFTVKVADFGLA---------RDIYDKEYYSVHNHT 160
Query: 193 --------IAPEVLR-RRYGKEIDIWSAGVILYILLS-GVPPF 225
+A E L+ +++ + D+WS GV+L+ L++ G PP+
Sbjct: 161 GAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPY 203
|
Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also called the HGF receptor. HGF/Met signaling plays a role in growth, transformation, cell motility, invasion, metastasis, angiogenesis, wound healing, and tissue regeneration. Aberrant expression of Met through mutations or gene amplification is associated with many human cancers including hereditary papillary renal and gastric carcinomas. The ligand for Ron is macrophage stimulating protein (MSP). Ron signaling is important in regulating cell motility, adhesion, proliferation, and apoptosis. Aberrant Ron expression is implicated in tumorigenesis and metastasis. Length = 262 |
| >gnl|CDD|173657 cd05113, PTKc_Btk_Bmx, Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome | Back alignment and domain information |
|---|
Score = 50.3 bits (120), Expect = 6e-07
Identities = 57/228 (25%), Positives = 96/228 (42%), Gaps = 26/228 (11%)
Query: 24 HYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQ 83
F + LG GQFGV + A K I K+ M +E++ I E ++ + LS
Sbjct: 5 DLTFLKELGTGQFGVVKY-GKWRGQYDVAIKMI-KEGSM--SEDEFIE-EAKVMMKLS-H 58
Query: 84 PNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSM 143
+V+ + +++V E G L + + + + +VC M
Sbjct: 59 EKLVQLYGVCTKQRPIYIVTEYMSNGCLLNYL-----REHGKRFQPSQLLEMCKDVCEGM 113
Query: 144 GVM------HRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGF---YIA 194
+ HRDL N DD +KV+DFG + + + Y VGS F +
Sbjct: 114 AYLESKQFIHRDLAARNCLV---DDQGCVKVSDFGLSRYVLDDE-YTSSVGSKFPVRWSP 169
Query: 195 PEVLRR-RYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQG 240
PEVL ++ + D+W+ GV+++ + S G P+ T + + QG
Sbjct: 170 PEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSETVEKVSQG 217
|
Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Btk contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Btk is expressed in B-cells, and a variety of myeloid cells including mast cells, platelets, neutrophils, and dendrictic cells. It interacts with a variety of partners, from cytosolic proteins to nuclear transcription factors, suggesting a diversity of functions. Stimulation of a diverse array of cell surface receptors, including antigen engagement of the B-cell receptor (BCR), leads to PH-mediated membrane translocation of Btk and subsequent phosphorylation by Src kinase and activation. Btk plays an important role in the life cycle of B-cells including their development, differentiation, proliferation, survival, and apoptosis. Mutations in Btk cause the primary immunodeficiency disease, X-linked agammaglobulinaemia (XLA) in humans. Bmx is primarily expressed in bone marrow and the arterial endothelium, and plays an important role in ischemia-induced angiogenesis. It facilitates arterial growth, capillary formation, vessel maturation, and bone marrow-derived endothelial progenitor cell mobilization. Length = 256 |
| >gnl|CDD|133168 cd05036, PTKc_ALK_LTK, Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase | Back alignment and domain information |
|---|
Score = 50.1 bits (120), Expect = 8e-07
Identities = 57/280 (20%), Positives = 102/280 (36%), Gaps = 43/280 (15%)
Query: 28 GRMLGRGQFG------VSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLS 81
R LG G FG + A K++ + E+D + + + +
Sbjct: 11 LRALGHGAFGEVYEGLYRGRDGDAVE-LQVAVKTLPESCS-EQDESDFLMEALIMSKF-- 66
Query: 82 GQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVN-AVNV- 139
N+V + +++EL GGDL + ER ++ ++ ++ A +V
Sbjct: 67 NHQNIVRLIGVSFERLPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVA 126
Query: 140 --CHSM---GVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFY-- 192
C + +HRD+ N + + K+ DFG A RDI + +Y
Sbjct: 127 KGCKYLEENHFIHRDIAARNCLLTCKGPGRVAKIADFGMA---------RDIYRASYYRK 177
Query: 193 ----------IAPEV-LRRRYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQG 240
+ PE L + + D+WS GV+L+ + S G P+ T + + + G
Sbjct: 178 GGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQEVMEFVTGG 237
Query: 241 EIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEH 280
DP ++ P+ R A +LE
Sbjct: 238 G---RLDPPKGCPGPVYRIMTDCWQHTPEDRPNFATILER 274
|
Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well as visceral muscle differentiation in Drosophila. ALK is aberrantly expressed as fusion proteins, due to chromosomal translocations, in about 60% of anaplastic large cell lymphomas (ALCLs). ALK fusion proteins are also found in rare cases of diffuse large B cell lymphomas (DLBCLs). LTK is mainly expressed in B lymphocytes and neuronal tissues. It is important in cell proliferation and survival. Transgenic mice expressing TLK display retarded growth and high mortality rate. In addition, a polymorphism in mouse and human LTK is implicated in the pathogenesis of systemic lupus erythematosus. Length = 277 |
| >gnl|CDD|133179 cd05048, PTKc_Ror, Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors | Back alignment and domain information |
|---|
Score = 50.1 bits (120), Expect = 1e-06
Identities = 54/224 (24%), Positives = 87/224 (38%), Gaps = 28/224 (12%)
Query: 27 FGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDM---IRREIQIRLYLSGQ 83
F LG G FG Y N + S+A K AE + R+E ++ L
Sbjct: 9 FLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQ-H 67
Query: 84 PNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRA----------- 132
PN+V E ++ E GDL + ++ +S+ A +
Sbjct: 68 PNIVCLLGVCTKEQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFL 127
Query: 133 -----IVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIV 187
I + S +HRDL N + +K++DFG + YR
Sbjct: 128 HIAIQIAAGMEYLSSHHFVHRDLAARN---CLVGEGLTVKISDFGLSRDIYSADYYRVQS 184
Query: 188 GSGF---YIAPE-VLRRRYGKEIDIWSAGVILYILLS-GVPPFW 226
S ++ PE +L ++ E DIWS GV+L+ + S G+ P++
Sbjct: 185 KSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYY 228
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. They play important roles in bone and heart formation. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Drosophila Ror is expressed only in the developing nervous system during neurite outgrowth and neuronal differentiation, suggesting a role for Drosophila Ror in neural development. More recently, mouse Ror1 and Ror2 have also been found to play an important role in regulating neurite growth in central neurons. Ror1 and Ror2 are believed to have some overlapping and redundant functions. Length = 283 |
| >gnl|CDD|173625 cd05032, PTKc_InsR_like, Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 49.3 bits (118), Expect = 1e-06
Identities = 55/218 (25%), Positives = 80/218 (36%), Gaps = 45/218 (20%)
Query: 28 GRMLGRGQFGVSYL-----CTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSG 82
R LG+G FG+ Y + A K++ + MR R E +
Sbjct: 11 IRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRE------RIEFLNEASVMK 64
Query: 83 Q---PNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGY----------NSERDAATV 129
+ +VV VVMEL GDL K Y N T+
Sbjct: 65 EFNCHHVVRLLGVVSTGQPTLVVMELMAKGDL------KSYLRSRRPEAENNPGLGPPTL 118
Query: 130 LRAIVNAVNVCHSMGVM------HRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVY 183
+ I A + M + HRDL N ++ D +K+ DFG E Y
Sbjct: 119 QKFIQMAAEIADGMAYLAAKKFVHRDLAARN-CMVAEDLT--VKIGDFGMTRDIYETDYY 175
Query: 184 RDIVGSGF----YIAPEVLRR-RYGKEIDIWSAGVILY 216
R G G ++APE L+ + + D+WS GV+L+
Sbjct: 176 RKG-GKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLW 212
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR and IGF-1R, which share 84% sequence identity in their kinase domains, display physiologically distinct yet overlapping functions in cell growth, differentiation, and metabolism. InsR activation leads primarily to metabolic effects while IGF-1R activation stimulates mitogenic pathways. In cells expressing both receptors, InsR/IGF-1R hybrids are found together with classical receptors. Both receptors can interact with common adaptor molecules such as IRS-1 and IRS-2. Length = 277 |
| >gnl|CDD|173630 cd05044, PTKc_c-ros, Catalytic domain of the Protein Tyrosine Kinase, C-ros | Back alignment and domain information |
|---|
Score = 49.1 bits (117), Expect = 2e-06
Identities = 59/231 (25%), Positives = 90/231 (38%), Gaps = 47/231 (20%)
Query: 29 RMLGRGQFGVSYLCT------ENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSG 82
LG G FG Y T S A K++ K D ++E +L
Sbjct: 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRK------GATDQEKKEFLKEAHLMS 54
Query: 83 Q---PNVVEFKSTYEDETAVHVVMELCEGGDLF----DRIIAKGYNSERDAATVLRAIVN 135
PN+V+ +++MEL EGGDL D + + +L ++
Sbjct: 55 NFNHPNIVKLLGVCLLNEPQYIIMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLD 114
Query: 136 AVNVCH---SMGVMHRDLKPENFSFISRDDNA--LLKVTDFGSALLFEEGQVYRDIVGSG 190
C M +HRDL N + +A ++K+ DFG A RDI S
Sbjct: 115 VAKGCVYLEQMHFIHRDLAARNCLVSEKGYDADRVVKIGDFGLA---------RDIYKSD 165
Query: 191 FY------------IAPEVLRR-RYGKEIDIWSAGVILY-ILLSGVPPFWA 227
+Y +APE L ++ + D+WS GV+++ IL G P+ A
Sbjct: 166 YYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPA 216
|
Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male mice bearing inactive mutations of c-ros lack the initial segment of the epididymis and are infertile. The Drosophila protein, Sevenless, is required for the specification of the R7 photoreceptor cell during eye development. Length = 269 |
| >gnl|CDD|140307 PTZ00284, PTZ00284, protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 48.4 bits (115), Expect = 6e-06
Identities = 58/228 (25%), Positives = 93/228 (40%), Gaps = 59/228 (25%)
Query: 111 LFDRIIAKGYNSERDAATVLRAIVNAVNVCHS-MGVMHRDLKPENFSFISRD-------- 161
L D I+ G S R A ++ A++ H+ + +MH DLKPEN + D
Sbjct: 218 LLDWIMKHGPFSHRHLAQIIFQTGVALDYFHTELHLMHTDLKPENILMETSDTVVDPVTN 277
Query: 162 -----DNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEV-LRRRYGKEIDIWSAGVIL 215
D +++ D G +E IV + Y +PEV L + D+WS G I+
Sbjct: 278 RALPPDPCRVRICDLGGCC--DERHSRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCII 335
Query: 216 YILLSG----------------------VPPFWAETKKGTYDAIL----QGEIDFDTDPW 249
Y L +G +P WA + GT +A L G++ TDP
Sbjct: 336 YELYTGKLLYDTHDNLEHLHLMEKTLGRLPSEWA-GRCGTEEARLLYNSAGQLRPCTDP- 393
Query: 250 PSISSTAK--------------DLVRRMLTKDPKRRITAAQVLEHPWL 283
++ A+ DL+ +L D ++R+ A Q+ HP++
Sbjct: 394 KHLARIARARPVREVIRDDLLCDLIYGLLHYDRQKRLNARQMTTHPYV 441
|
Length = 467 |
| >gnl|CDD|133180 cd05049, PTKc_Trk, Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases | Back alignment and domain information |
|---|
Score = 47.4 bits (113), Expect = 7e-06
Identities = 65/285 (22%), Positives = 110/285 (38%), Gaps = 49/285 (17%)
Query: 27 FGRMLGRGQFGVSYLCTENSTNRPYACKSIA----KKPKMRLAENDMIRREIQIRLYLSG 82
R LG G FG +L + +A K+ A D RE ++ L
Sbjct: 9 LKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDF-EREAEL-LTNFQ 66
Query: 83 QPNVVEFKSTYEDETAVHVVMELCEGGDLF--------DRIIAKGYNSERDAATVLRAIV 134
N+V+F + +V E E GDL D K +S T+ + +
Sbjct: 67 HENIVKFYGVCTEGDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQ 126
Query: 135 NAVNVCHSMGVM------HRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVG 188
AV + M + HRDL N + ++K+ DFG + RD+
Sbjct: 127 IAVQIASGMVYLASQHFVHRDLATRNCLV---GYDLVVKIGDFGMS---------RDVYT 174
Query: 189 SGFY------------IAPE-VLRRRYGKEIDIWSAGVILY-ILLSGVPPFWAETKKGTY 234
+ +Y + PE ++ R++ E D+WS GV+L+ I G P++ + +
Sbjct: 175 TDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNEEVI 234
Query: 235 DAILQGEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLE 279
+ I QG + + S D++ +DP++RI + E
Sbjct: 235 ECITQGRL---LQRPRTCPSEVYDIMLGCWKRDPQQRINIKDIHE 276
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalytic domain. Trk receptors are mainly expressed in the peripheral and central nervous systems. They play important roles in cell fate determination, neuronal survival and differentiation, as well as in the regulation of synaptic plasticity. Altered expression of Trk receptors is associated with many human diseases. Length = 280 |
| >gnl|CDD|222407 pfam13833, EF_hand_6, EF-hand domain pair | Back alignment and domain information |
|---|
Score = 42.5 bits (101), Expect = 9e-06
Identities = 20/51 (39%), Positives = 25/51 (49%)
Query: 404 SDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTD 454
+T ELK LA LG +L E EV+ D DG+G I EF L+
Sbjct: 2 KGLITREELKRALALLGISLSEEEVDILFREFDTDGDGKISFEEFCVLLQR 52
|
Length = 53 |
| >gnl|CDD|133201 cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk | Back alignment and domain information |
|---|
Score = 46.9 bits (111), Expect = 9e-06
Identities = 56/196 (28%), Positives = 91/196 (46%), Gaps = 17/196 (8%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFK 90
LG GQFG ++ T N + A K++ KP E+ + +I +L +V+
Sbjct: 14 LGNGQFGEVWMGTWNGNTK-VAVKTL--KPGTMSPESFLEEAQIMKKLR---HDKLVQLY 67
Query: 91 STYEDETAVHVVMELCEGGDLFDRII-AKGYNSERDAATVLRAIVNA-VNVCHSMGVMHR 148
+ +E +++V E G L D + +G + + A V A + M +HR
Sbjct: 68 AVVSEE-PIYIVTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHR 126
Query: 149 DLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYI---APE-VLRRRYGK 204
DL+ N I D + K+ DFG A L E+ + Y G+ F I APE L R+
Sbjct: 127 DLRSAN---ILVGDGLVCKIADFGLARLIEDNE-YTARQGAKFPIKWTAPEAALYGRFTI 182
Query: 205 EIDIWSAGVILYILLS 220
+ D+WS G++L L++
Sbjct: 183 KSDVWSFGILLTELVT 198
|
Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Fyn, together with Lck, plays a critical role in T-cell signal transduction by phosphorylating ITAM (immunoreceptor tyr activation motif) sequences on T-cell receptors, ultimately leading to the proliferation and differentiation of T-cells. In addition, Fyn is involved in the myelination of neurons, and is implicated in Alzheimer's and Parkinson's diseases. Yrk has been detected only in chickens. It is primarily found in neuronal and epithelial cells and in macrophages. It may play a role in inflammation and in response to injury. Length = 260 |
| >gnl|CDD|133172 cd05040, PTKc_Ack_like, Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase | Back alignment and domain information |
|---|
Score = 45.8 bits (109), Expect = 2e-05
Identities = 51/204 (25%), Positives = 71/204 (34%), Gaps = 33/204 (16%)
Query: 31 LGRGQFGV---SYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVV 87
LG G FGV T P A K K K+ +D ++ E I L N++
Sbjct: 3 LGDGSFGVVRRGEWSTSGGKVIPVAVK-CLKSDKLSDIMDDFLK-EAAIMHSLD-HENLI 59
Query: 88 EFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMG--- 144
+ +V EL G L DR+ + AV + + M
Sbjct: 60 RLYGVVLTHPLM-MVTELAPLGSLLDRL----RKDALGHFLISTLCDYAVQIANGMRYLE 114
Query: 145 ---VMHRDLKPENFSFISRDDNALLKVTDFG-SALLFEEGQVYRDIVGSGF-------YI 193
+HRDL N S D +K+ DFG L + Y +
Sbjct: 115 SKRFIHRDLAARNILLASDD---KVKIGDFGLMRALPQNEDHYV----MEEHLKVPFAWC 167
Query: 194 APEVLR-RRYGKEIDIWSAGVILY 216
APE LR R + D+W GV L+
Sbjct: 168 APESLRTRTFSHASDVWMFGVTLW 191
|
Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with androgen-independent prostate cancer progression. Tnk1 regulates TNFalpha signaling and may play an important role in cell death. Length = 257 |
| >gnl|CDD|222177 pfam13499, EF_hand_5, EF-hand domain pair | Back alignment and domain information |
|---|
Score = 42.0 bits (99), Expect = 2e-05
Identities = 18/60 (30%), Positives = 27/60 (45%), Gaps = 4/60 (6%)
Query: 397 REMDTDNSDTLTLSELKAGLAKLGSALEESEVNQ----YMEAGDIDGNGNIDSIEFVNLM 452
+ +D D + + EL+ L LG L + EV + D DG+G I EF+ M
Sbjct: 1 KLLDKDGDGYIDVEELRKLLKALGLKLTDEEVEELIEADFNEIDKDGDGRISFEEFLEAM 60
|
Length = 60 |
| >gnl|CDD|173650 cd05094, PTKc_TrkC, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C | Back alignment and domain information |
|---|
Score = 45.8 bits (108), Expect = 2e-05
Identities = 59/246 (23%), Positives = 96/246 (39%), Gaps = 45/246 (18%)
Query: 29 RMLGRGQFGVSYL--CTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNV 86
R LG G FG +L C S + ++ LA +RE ++ L ++
Sbjct: 11 RELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQ-HEHI 69
Query: 87 VEFKSTYEDETAVHVVMELCEGGDLFDRIIAKG-------------YNSERDAATVLR-- 131
V+F D + +V E + GDL + A G E + +L
Sbjct: 70 VKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIA 129
Query: 132 -AIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSG 190
I + + S +HRDL N N L+K+ DFG + RD+ +
Sbjct: 130 SQIASGMVYLASQHFVHRDLATRNCLV---GANLLVKIGDFGMS---------RDVYSTD 177
Query: 191 FY------------IAPE-VLRRRYGKEIDIWSAGVILY-ILLSGVPPFWAETKKGTYDA 236
+Y + PE ++ R++ E D+WS GVIL+ I G P++ + +
Sbjct: 178 YYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIEC 237
Query: 237 ILQGEI 242
I QG +
Sbjct: 238 ITQGRV 243
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some non-neural tissues including the developing heart. NT3/TrkC signaling plays an important role in the innervation of the cardiac conducting system and the development of smooth muscle cells. Mice deficient with NT3 and TrkC have multiple heart defects. NT3/TrkC signaling is also critical for the development and maintenance of enteric neurons that are important for the control of gut peristalsis. Length = 291 |
| >gnl|CDD|173767 cd08227, PK_STRAD_alpha, Pseudokinase domain of STE20-related kinase adapter protein alpha | Back alignment and domain information |
|---|
Score = 45.7 bits (108), Expect = 3e-05
Identities = 49/193 (25%), Positives = 87/193 (45%), Gaps = 20/193 (10%)
Query: 49 RPYACKSIAKKPKMRLAENDMIRREIQIRLYLS---GQPNVVEFKSTYEDETAVHVVMEL 105
+P ++ + N+M+ +Q L++S PN+V +++T+ + + VV
Sbjct: 22 KPTGEYVTVRRINLEACTNEMVTF-LQGELHVSKLFNHPNIVPYRATFIADNELWVVTSF 80
Query: 106 CEGGDLFDRIIAKGYN--SERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDN 163
G D I + SE A +L+ ++ A++ H MG +HR +K + IS D
Sbjct: 81 MAYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMGYVHRSVKASHI-LISVDGK 139
Query: 164 ALLKVTDFGSAL-LFEEGQVYRDI-------VGSGFYIAPEVLRRR---YGKEIDIWSAG 212
L + S L + GQ R + V +++PEVL++ Y + DI+S G
Sbjct: 140 VYL--SGLRSNLSMINHGQRLRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVG 197
Query: 213 VILYILLSGVPPF 225
+ L +G PF
Sbjct: 198 ITACELANGHVPF 210
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buccal mucosa. There are two forms of STRAD, alpha and beta, that complex with LKB1 and MO25. The structure of STRAD-alpha is available and shows that this protein binds ATP, has an ordered activation loop, and adopts a closed conformation typical of fully active protein kinases. It does not possess activity due to nonconservative substitutions of essential catalytic residues. ATP binding enhances the affinity of STRAD for MO25. The conformation of STRAD-alpha, stabilized through ATP and MO25, may be needed to activate LKB1. A mutation which results in a truncation of a C-terminal part of the human STRAD-alpha pseudokinase domain and disrupts its association with LKB1, leads to PMSE (polyhydramnios, megalencephaly, symptomatic epilepsy) syndrome. Several splice variants of STRAD-alpha exist which exhibit different effects on the localization and activation of LKB1. Length = 327 |
| >gnl|CDD|238008 cd00051, EFh, EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands | Back alignment and domain information |
|---|
Score = 41.0 bits (97), Expect = 4e-05
Identities = 23/90 (25%), Positives = 35/90 (38%), Gaps = 28/90 (31%)
Query: 328 LKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNSSTLESLCENLPTK 387
L+E F D D +GT+S DEL+A L +G L+E
Sbjct: 2 LREAFRLFDKDGDGTISADELKAALKSLGEGLSE-------------------------- 35
Query: 388 EKQKLMEKFREMDTDNSDTLTLSELKAGLA 417
+++ E RE+D D + E +A
Sbjct: 36 --EEIDEMIREVDKDGDGKIDFEEFLELMA 63
|
Ca2+ binding induces a conformational change in the EF-hand motif, leading to the activation or inactivation of target proteins. EF-hands tend to occur in pairs or higher copy numbers. Length = 63 |
| >gnl|CDD|133213 cd05082, PTKc_Csk, Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase | Back alignment and domain information |
|---|
Score = 45.0 bits (106), Expect = 4e-05
Identities = 38/135 (28%), Positives = 67/135 (49%), Gaps = 18/135 (13%)
Query: 94 EDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSM------GVMH 147
E++ +++V E G L D + ++G R + +++VC +M +H
Sbjct: 70 EEKGGLYIVTEYMAKGSLVDYLRSRG----RSVLGGDCLLKFSLDVCEAMEYLEANNFVH 125
Query: 148 RDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGF-YIAPEVLR-RRYGKE 205
RDL N +S D+ A KV+DFG L +E +D + APE LR +++ +
Sbjct: 126 RDLAARNV-LVSEDNVA--KVSDFG---LTKEASSTQDTGKLPVKWTAPEALREKKFSTK 179
Query: 206 IDIWSAGVILYILLS 220
D+WS G++L+ + S
Sbjct: 180 SDVWSFGILLWEIYS 194
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Csk is expressed in a wide variety of tissues. As a negative regulator of Src, Csk plays a role in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. In addition, Csk also shows Src-independent functions. It is a critical component in G-protein signaling, and plays a role in cytoskeletal reorganization and cell migration. Length = 256 |
| >gnl|CDD|133194 cd05063, PTKc_EphR_A2, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2 | Back alignment and domain information |
|---|
Score = 45.0 bits (106), Expect = 4e-05
Identities = 53/223 (23%), Positives = 89/223 (39%), Gaps = 18/223 (8%)
Query: 29 RMLGRGQFGVSY---LCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPN 85
+++G G+FG + L A K++ KP + E I S N
Sbjct: 11 KVIGAGEFGEVFRGILKMPGRKEVAVAIKTL--KPGYTEKQRQDFLSEASIMGQFSHH-N 67
Query: 86 VVEFKSTYEDETAVHVVMELCEGGDLFDRIIAK--GYNSERDAATVLRAIVNAVNVCHSM 143
++ + ++ E E G L D+ + G S +LR I + M
Sbjct: 68 IIRLEGVVTKFKPAMIITEYMENGAL-DKYLRDHDGEFSSYQLVGMLRGIAAGMKYLSDM 126
Query: 144 GVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSG----FYIAPEVLR 199
+HRDL N I + N KV+DFG + + E+ G + APE +
Sbjct: 127 NYVHRDLAARN---ILVNSNLECKVSDFGLSRVLEDDPEGTYTTSGGKIPIRWTAPEAIA 183
Query: 200 -RRYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQG 240
R++ D+WS G++++ ++S G P+W + AI G
Sbjct: 184 YRKFTSASDVWSFGIVMWEVMSFGERPYWDMSNHEVMKAINDG 226
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. The EphA2 receptor is overexpressed in tumor cells and tumor blood vessels in a variety of cancers including breast, prostate, lung, and colon. As a result, it is an attractive target for drug design since its inhibition could affect several aspects of tumor progression. Length = 268 |
| >gnl|CDD|133165 cd05033, PTKc_EphR, Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 44.3 bits (105), Expect = 7e-05
Identities = 52/222 (23%), Positives = 96/222 (43%), Gaps = 17/222 (7%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQ---PN 85
+++G G+FG + +A K ++ +D R + + GQ PN
Sbjct: 10 KVIGGGEFGEVCRGRLKLPGKK--EIDVAIK-TLKAGSSDKQRLDFLTEASIMGQFDHPN 66
Query: 86 VVEFKSTYEDETAVHVVMELCEGGDLFDRIIAK--GYNSERDAATVLRAIVNAVNVCHSM 143
++ + V ++ E E G L D+ + + G + +LR I + + M
Sbjct: 67 IIRLEGVVTKSRPVMIITEYMENGSL-DKFLRENDGKFTVGQLVGMLRGIASGMKYLSEM 125
Query: 144 GVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYI---APEVLR- 199
+HRDL N I + N + KV+DFG + E+ + G I APE +
Sbjct: 126 NYVHRDLAARN---ILVNSNLVCKVSDFGLSRRLEDSEATYTTKGGKIPIRWTAPEAIAY 182
Query: 200 RRYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQG 240
R++ D+WS G++++ ++S G P+W + + A+ G
Sbjct: 183 RKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQDVIKAVEDG 224
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. This allows ephrin/EphR dimers to form, leading to the activation of the intracellular tyr kinase domain. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). The main effect of ephrin/EphR interaction is cell-cell repulsion or adhesion. Ephrin/EphR signaling is important in neural development and plasticity, cell morphogenesis and proliferation, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266 |
| >gnl|CDD|173647 cd05091, PTKc_Ror2, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2 | Back alignment and domain information |
|---|
Score = 44.2 bits (104), Expect = 7e-05
Identities = 54/230 (23%), Positives = 92/230 (40%), Gaps = 42/230 (18%)
Query: 27 FGRMLGRGQFGVSYL-----CTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLS 81
F LG +FG Y + A K++ K + L E + E +R L
Sbjct: 9 FMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREE--FKHEAMMRSRLQ 66
Query: 82 GQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSE----------------RD 125
PN+V E + ++ C DL + ++ + +S+ D
Sbjct: 67 -HPNIVCLLGVVTKEQPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPAD 125
Query: 126 AATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEE--GQVY 183
++ I + S V+H+DL N D +K++D G LF E Y
Sbjct: 126 FVHIVTQIAAGMEFLSSHHVVHKDLATRNVLVF---DKLNVKISDLG---LFREVYAADY 179
Query: 184 RDIVGSGF----YIAPEVLRRRYGK---EIDIWSAGVILYILLS-GVPPF 225
++G+ +++PE + YGK + DIWS GV+L+ + S G+ P+
Sbjct: 180 YKLMGNSLLPIRWMSPEAIM--YGKFSIDSDIWSYGVVLWEVFSYGLQPY 227
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror2 plays important roles in skeletal and heart formation. Ror2-deficient mice show widespread bone abnormalities, ventricular defects in the heart, and respiratory dysfunction. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Ror2 is also implicated in neural development. Length = 283 |
| >gnl|CDD|173649 cd05093, PTKc_TrkB, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B | Back alignment and domain information |
|---|
Score = 43.5 bits (102), Expect = 1e-04
Identities = 57/244 (23%), Positives = 100/244 (40%), Gaps = 44/244 (18%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDM---IRREIQIRLYLSGQPN 85
R LG G FG +L E P K + ++ A ++ RE ++ L + +
Sbjct: 11 RELGEGAFGKVFL-AECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHE-H 68
Query: 86 VVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNS----ERDAATVL---------RA 132
+V+F + + +V E + GDL + A G ++ E + L +
Sbjct: 69 IVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQ 128
Query: 133 IVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFY 192
I + S +HRDL N +N L+K+ DFG + RD+ + +Y
Sbjct: 129 IAAGMVYLASQHFVHRDLATRNCLV---GENLLVKIGDFGMS---------RDVYSTDYY 176
Query: 193 ------------IAPE-VLRRRYGKEIDIWSAGVILY-ILLSGVPPFWAETKKGTYDAIL 238
+ PE ++ R++ E D+WS GV+L+ I G P++ + + I
Sbjct: 177 RVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECIT 236
Query: 239 QGEI 242
QG +
Sbjct: 237 QGRV 240
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly expressed in the nervous system and in some non-neural tissues. It plays important roles in cell proliferation, differentiation, and survival. BDNF/Trk signaling plays a key role in regulating activity-dependent synaptic plasticity. TrkB also contributes to protection against gp120-induced neuronal cell death. TrkB overexpression is associated with poor prognosis in neuroblastoma (NB) and other human cancers. It acts as a suppressor of anoikis (detachment-induced apoptosis) and contributes to tumor metastasis. Length = 288 |
| >gnl|CDD|133181 cd05050, PTKc_Musk, Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase | Back alignment and domain information |
|---|
Score = 43.3 bits (102), Expect = 1e-04
Identities = 35/146 (23%), Positives = 62/146 (42%), Gaps = 29/146 (19%)
Query: 146 MHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPE--------- 196
+HRDL N + +N ++K+ DFG + R+I + +Y A E
Sbjct: 152 VHRDLATRN-CLVG--ENMVVKIADFG---------LSRNIYSADYYKASENDAIPIRWM 199
Query: 197 ----VLRRRYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQGEIDFDTDPWPS 251
+ RY E D+W+ GV+L+ + S G+ P++ + + G + D P
Sbjct: 200 PPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMAHEEVIYYVRDGNVLSCPDNCP- 258
Query: 252 ISSTAKDLVRRMLTKDPKRRITAAQV 277
+L+R +K P R + A +
Sbjct: 259 --LELYNLMRLCWSKLPSDRPSFASI 282
|
Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates Musk autophosphorylation and activation, leading to the clustering of acetylcholine receptors (AChRs). To date, there is no evidence to suggest that agrin binds directly to Musk. Mutations in AChR, Musk and other partners are responsible for diseases of the NMJ, such as the autoimmune syndrome myasthenia gravis. Length = 288 |
| >gnl|CDD|173634 cd05053, PTKc_FGFR, Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors | Back alignment and domain information |
|---|
Score = 43.2 bits (102), Expect = 2e-04
Identities = 54/230 (23%), Positives = 85/230 (36%), Gaps = 46/230 (20%)
Query: 28 GRMLGRGQFGVSYLCTENST-NRPYACKSIAKKPKMRLAENDMIR--REIQIRLYLSGQP 84
G+ LG G FG N K K E D+ E+++ +
Sbjct: 17 GKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHK 76
Query: 85 NVVEFKSTYEDETAVHVVMELCEGGDLFD-----RIIAKGYNSERDAAT----VLRAIVN 135
N++ E ++VV+E G+L D R + + + + +V+
Sbjct: 77 NIINLLGVCTQEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVS 136
Query: 136 -AVNVCHSMG------VMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVG 188
A V M +HRDL N + ++ ++K+ DFG A RDI
Sbjct: 137 FAYQVARGMEFLASKKCIHRDLAARN---VLVTEDHVMKIADFGLA---------RDIHH 184
Query: 189 SGFY------------IAPEVLRRR-YGKEIDIWSAGVILY--ILLSGVP 223
+Y +APE L R Y + D+WS GV+L+ L G P
Sbjct: 185 IDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSP 234
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, and intracellular signaling. There are at least 23 FGFs and four types of FGFRs. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. FGF/FGFR signaling is important in the regulation of embryonic development, homeostasis, and regenerative processes. Depending on the cell type and stage, FGFR signaling produces diverse cellular responses including proliferation, growth arrest, differentiation, and apoptosis. Aberrant signaling leads to many human diseases such as skeletal, olfactory, and metabolic disorders, as well as cancer. Length = 293 |
| >gnl|CDD|173648 cd05092, PTKc_TrkA, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A | Back alignment and domain information |
|---|
Score = 43.1 bits (101), Expect = 2e-04
Identities = 62/242 (25%), Positives = 99/242 (40%), Gaps = 46/242 (19%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKS-IAKKPKMRLAENDM--IRREIQIRLYLSGQPNVV 87
LG G FG +L E P K +A K +E+ +RE ++ L Q ++V
Sbjct: 13 LGEGAFGKVFL-AECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQ-HIV 70
Query: 88 EFKSTYEDETAVHVVMELCEGGDL--FDR-------IIAKGYNSERDAATVLRAIVNAVN 138
F + + +V E GDL F R I+A G + T+ + + A
Sbjct: 71 RFYGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQ 130
Query: 139 VCHSM------GVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFY 192
+ M +HRDL N + + ++K+ DFG + RDI + +Y
Sbjct: 131 IASGMVYLASLHFVHRDLATRN-CLVGQG--LVVKIGDFGMS---------RDIYSTDYY 178
Query: 193 ------------IAPE-VLRRRYGKEIDIWSAGVILY-ILLSGVPPFWAETKKGTYDAIL 238
+ PE +L R++ E DIWS GV+L+ I G P++ + + I
Sbjct: 179 RVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTEAIECIT 238
Query: 239 QG 240
QG
Sbjct: 239 QG 240
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory and sympathetic neurons of the peripheral nervous system, and in basal forebrain cholinergic neurons of the central nervous system. It is critical for neuronal growth, differentiation and survival. Alternative TrkA splicing has been implicated as a pivotal regulator of neuroblastoma (NB) behavior. Normal TrkA expression is associated with better NB prognosis, while the hypoxia-regulated TrkAIII splice variant promotes NB pathogenesis and progression. Aberrant TrkA expression has also been demonstrated in non-neural tumors including prostate, breast, lung, and pancreatic cancers. Length = 280 |
| >gnl|CDD|133220 cd05089, PTKc_Tie1, Catalytic domain of the Protein Tyrosine Kinase, Tie1 | Back alignment and domain information |
|---|
Score = 43.1 bits (101), Expect = 2e-04
Identities = 57/248 (22%), Positives = 103/248 (41%), Gaps = 39/248 (15%)
Query: 18 YEDVMLHYFFGRMLGRGQFG--VSYLCTENSTNRPYACKSIAKKPKMRLAENDM--IRRE 73
+ED+ F ++G G FG + + ++ A K + K +END E
Sbjct: 1 WEDIK----FEDVIGEGNFGQVIRAMIKKDGLKMNAAIKML----KEFASENDHRDFAGE 52
Query: 74 IQIRLYLSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFD-----RIIAK--------GY 120
+++ L PN++ E+ +++ +E G+L D R++ G
Sbjct: 53 LEVLCKLGHHPNIINLLGACENRGYLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGT 112
Query: 121 NSERDAATVLRAIVNAVNVCHSMG---VMHRDLKPENFSFISRDDNALLKVTDFGSALLF 177
S + +L+ + + +HRDL N + +N K+ DFG L
Sbjct: 113 ASTLTSQQLLQFASDVATGMQYLSEKQFIHRDLAARN---VLVGENLASKIADFG---LS 166
Query: 178 EEGQVY-RDIVGS--GFYIAPEVLRRR-YGKEIDIWSAGVILYILLS-GVPPFWAETKKG 232
+VY + +G ++A E L Y + D+WS GV+L+ ++S G P+ T
Sbjct: 167 RGEEVYVKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAE 226
Query: 233 TYDAILQG 240
Y+ + QG
Sbjct: 227 LYEKLPQG 234
|
Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations. In vivo studies of Tie1 show that it is critical in vascular development. Length = 297 |
| >gnl|CDD|214801 smart00750, KIND, kinase non-catalytic C-lobe domain | Back alignment and domain information |
|---|
Score = 41.2 bits (97), Expect = 3e-04
Identities = 34/167 (20%), Positives = 62/167 (37%), Gaps = 22/167 (13%)
Query: 122 SERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQ 181
+E + V ++ +HR K N + GS Q
Sbjct: 15 NEEEIWAVCLQ------CLGALRELHRQAKSGN-----ILLTWDGLLKLDGSVAFKTPEQ 63
Query: 182 VYRDIVGSGFYIAPEVLRRR-YGKEIDIWSAGVILYILLSGVPPFWAETK-KGTYDAILQ 239
+++APEV++ + Y ++ DI+S G+ LY L P+ E + + +L
Sbjct: 64 ---SRPDP-YFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLN 119
Query: 240 GEIDFDTDPWPSISS-----TAKDLVRRMLTKDPKRRITAAQVLEHP 281
G D ++ + +D +R ++ P+RR A L H
Sbjct: 120 GMPADDPRDRSNLEGVSAARSFEDFMRLCASRLPQRREAANHYLAHC 166
|
It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features. Length = 176 |
| >gnl|CDD|173651 cd05095, PTKc_DDR2, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2 | Back alignment and domain information |
|---|
Score = 42.2 bits (99), Expect = 3e-04
Identities = 55/227 (24%), Positives = 92/227 (40%), Gaps = 41/227 (18%)
Query: 27 FGRMLGRGQFGVSYLC----TENSTNRPYACKSIAKKP-----KM------RLAENDMIR 71
F LG GQFG +LC E ++ ++ +P KM + A ND +
Sbjct: 9 FKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFL- 67
Query: 72 REIQIRLYLSGQPNVVEFKSTYEDETAVHVVMELCEGGDL---FDRIIAKGYNSERDAAT 128
+EI+I L PN++ + + ++ E E GDL R + + D T
Sbjct: 68 KEIKIMSRLK-DPNIIRLLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVT 126
Query: 129 V--------LRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEG 180
+ I + + S+ +HRDL N + + N +K+ DFG + G
Sbjct: 127 ISYSTLIFMATQIASGMKYLSSLNFVHRDLATRN-CLVGK--NYTIKIADFGMSRNLYSG 183
Query: 181 QVYRDIVGSGFYIAP-------EVLRRRYGKEIDIWSAGVILYILLS 220
YR I G + P +L ++ D+W+ GV L+ +L+
Sbjct: 184 DYYR-IQGRA--VLPIRWMSWESILLGKFTTASDVWAFGVTLWEILT 227
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues with the highest levels found in skeletal muscle, skin, kidney and lung. It is important in cell proliferation and development. Mice, with a deletion of DDR2, suffer from dwarfism and delayed healing of epidermal wounds. DDR2 also contributes to collagen (type I) regulation by inhibiting fibrillogenesis and altering the morphology of collagen fibers. It is also expressed in immature dendritic cells (DCs), where it plays a role in DC activation and function. Length = 296 |
| >gnl|CDD|222177 pfam13499, EF_hand_5, EF-hand domain pair | Back alignment and domain information |
|---|
Score = 38.1 bits (89), Expect = 4e-04
Identities = 19/83 (22%), Positives = 32/83 (38%), Gaps = 24/83 (28%)
Query: 334 EMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNSSTLESLCENLPTKEKQKLM 393
+D D +G + +ELR L +G LT+ +V+ L+EA
Sbjct: 2 LLDKDGDGYIDVEELRKLLKALGLKLTDEEVEELIEAD---------------------- 39
Query: 394 EKFREMDTDNSDTLTLSELKAGL 416
F E+D D ++ E +
Sbjct: 40 --FNEIDKDGDGRISFEEFLEAM 60
|
Length = 60 |
| >gnl|CDD|133229 cd05098, PTKc_FGFR1, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1 | Back alignment and domain information |
|---|
Score = 41.9 bits (98), Expect = 5e-04
Identities = 52/225 (23%), Positives = 92/225 (40%), Gaps = 29/225 (12%)
Query: 27 FGRMLGRGQFGVSYLCTENSTNR--PYACKSIA-KKPKMRLAENDM--IRREIQIRLYLS 81
G+ LG G FG + ++ P +A K K E D+ + E+++ +
Sbjct: 22 LGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIG 81
Query: 82 GQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAK-------GYN---------SERD 125
N++ + ++V++E G+L + + A+ YN S +D
Sbjct: 82 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKD 141
Query: 126 AATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRD 185
+ + + S +HRDL N + +DN ++K+ DFG A Y+
Sbjct: 142 LVSCAYQVARGMEYLASKKCIHRDLAARNV--LVTEDN-VMKIADFGLARDIHHIDYYKK 198
Query: 186 IVGSGF---YIAPEVLRRR-YGKEIDIWSAGVILY-ILLSGVPPF 225
++APE L R Y + D+WS GV+L+ I G P+
Sbjct: 199 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY 243
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Alternative splicing of FGFR1 transcripts produces a variety of isoforms, which are differentially expressed in cells. FGFR1 binds the ligands, FGF1 and FGF2, with high affinity and has also been reported to bind FGF4, FGF6, and FGF9. FGFR1 signaling is critical in the control of cell migration during embryo development. It promotes cell proliferation in fibroblasts. Nuclear FGFR1 plays a role in the regulation of transcription. Mutations, insertions or deletions of FGFR1 have been identified in patients with Kallman's syndrome (KS), an inherited disorder characterized by hypogonadotropic hypogonadism and loss of olfaction. Aberrant FGFR1 expression has been found in some human cancers including 8P11 myeloproliferative syndrome (EMS), breast cancer, and pancreatic adenocarcinoma. Length = 307 |
| >gnl|CDD|133228 cd05097, PTKc_DDR_like, Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 41.5 bits (97), Expect = 6e-04
Identities = 51/224 (22%), Positives = 87/224 (38%), Gaps = 36/224 (16%)
Query: 27 FGRMLGRGQFGVSYLCTENS------------TNRPYACKSIAKKPKM-RLAENDMIRRE 73
LG GQFG +LC +P + + + A ND + +E
Sbjct: 9 LKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFL-KE 67
Query: 74 IQIRLYLSGQPNVVEFKSTYEDETAVHVVMELCEGGD----LFDRIIAKGYNSERDAATV 129
I+I L PN++ + + ++ E E GD L R I + + +V
Sbjct: 68 IKIMSRLK-NPNIIRLLGVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSV 126
Query: 130 LRA--------IVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQ 181
A I + + S+ +HRDL N ++ +K+ DFG + G
Sbjct: 127 SIANLLYMAVQIASGMKYLASLNFVHRDLATRNCLV---GNHYTIKIADFGMSRNLYSGD 183
Query: 182 VYRDIVGSGF----YIAPE-VLRRRYGKEIDIWSAGVILYILLS 220
YR I G ++A E +L ++ D+W+ GV L+ + +
Sbjct: 184 YYR-IQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFT 226
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 295 |
| >gnl|CDD|215638 PLN03225, PLN03225, Serine/threonine-protein kinase SNT7; Provisional | Back alignment and domain information |
|---|
Score = 40.9 bits (96), Expect = 0.001
Identities = 20/49 (40%), Positives = 31/49 (63%), Gaps = 6/49 (12%)
Query: 128 TVLRAIVNAVNVCHSMGVMHRDLKPEN--FSFISRDDNALLKVTDFGSA 174
T++R I+ A++ HS G++HRD+KP+N FS S K+ D G+A
Sbjct: 259 TIMRQILFALDGLHSTGIVHRDVKPQNIIFSEGSGS----FKIIDLGAA 303
|
Length = 566 |
| >gnl|CDD|133227 cd05096, PTKc_DDR1, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1 | Back alignment and domain information |
|---|
Score = 40.7 bits (95), Expect = 0.001
Identities = 60/237 (25%), Positives = 92/237 (38%), Gaps = 47/237 (19%)
Query: 24 HYFFGRMLGRGQFGVSYLC-TENSTNRP---------------YACKSIAKKPKMRLAEN 67
H F LG GQFG +LC N + P A K I + + A N
Sbjct: 6 HLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVK-ILRPDANKNARN 64
Query: 68 DMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVVMELCEGGDL--------FDRIIAKG 119
D + +E++I L PN++ DE + ++ E E GDL D G
Sbjct: 65 DFL-KEVKILSRLK-DPNIIRLLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENG 122
Query: 120 YNSERDAA-----------TVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKV 168
++ A V I + + S+ +HRDL N +N +K+
Sbjct: 123 NDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLNFVHRDLATRNCLV---GENLTIKI 179
Query: 169 TDFGSALLFEEGQVYRDIVGSGF----YIAPE-VLRRRYGKEIDIWSAGVILYILLS 220
DFG + G YR I G ++A E +L ++ D+W+ GV L+ +L
Sbjct: 180 ADFGMSRNLYAGDYYR-IQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILM 235
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in keratinocytes, colonic mucosa epithelium, lung epithelium, thyroid follicles, and the islets of Langerhans. During embryonic development, it is found in the developing neuroectoderm. DDR1 is a key regulator of cell morphogenesis, differentiation and proliferation. It is important in the development of the mammary gland, the vasculator and the kidney. DDR1 is also found in human leukocytes, where it facilitates cell adhesion, migration, maturation, and cytokine production. Length = 304 |
| >gnl|CDD|133240 cd05109, PTKc_HER2, Catalytic domain of the Protein Tyrosine Kinase, HER2 | Back alignment and domain information |
|---|
Score = 40.4 bits (94), Expect = 0.001
Identities = 39/151 (25%), Positives = 68/151 (45%), Gaps = 9/151 (5%)
Query: 97 TAVHVVMELCEGGDLFDRIIA-KGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENF 155
+ V +V +L G L D + K +D I ++ + ++HRDL N
Sbjct: 81 STVQLVTQLMPYGCLLDYVRENKDRIGSQDLLNWCVQIAKGMSYLEEVRLVHRDLAARNV 140
Query: 156 SFISRDDNALLKVTDFGSALLFE--EGQVYRD--IVGSGFYIAPEVLRRRYGKEIDIWSA 211
S + +K+TDFG A L + E + + D V + +L RR+ + D+WS
Sbjct: 141 LVKSPNH---VKITDFGLARLLDIDETEYHADGGKVPIKWMALESILHRRFTHQSDVWSY 197
Query: 212 GVILYILLS-GVPPFWAETKKGTYDAILQGE 241
GV ++ L++ G P+ + D + +GE
Sbjct: 198 GVTVWELMTFGAKPYDGIPAREIPDLLEKGE 228
|
Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. HER2 does not bind to any known EGFR subfamily ligands, but contributes to the kinase activity of all possible heterodimers. It acts as the preferred partner with other ligand-bound EGFR proteins and functions as a signal amplifier, with the HER2-HER3 heterodimer being the most potent pair in mitogenic signaling. HER2 plays an important role in cell development, proliferation, survival and motility. Overexpression of HER2 results in its activation and downstream signaling, even in the absence of ligand. HER2 overexpression, mainly due to gene amplification, has been shown in a variety of human cancers. Its role in breast cancer is especially well-documented. HER2 is up-regulated in about 25% of breast tumors and is associated with increases in tumor aggressiveness, recurrence and mortality. HER2 is a target for monoclonal antibodies and small molecule inhibitors, which are being developed as treatments for cancer. The first humanized antibody approved for clinical use is Trastuzumab (Herceptin), which is being used in combination with other therapies to improve the survival rates of patients with HER2-overexpressing breast cancer. Length = 279 |
| >gnl|CDD|173641 cd05072, PTKc_Lyn, Catalytic domain of the Protein Tyrosine Kinase, Lyn | Back alignment and domain information |
|---|
Score = 40.4 bits (94), Expect = 0.001
Identities = 51/226 (22%), Positives = 98/226 (43%), Gaps = 31/226 (13%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVE 88
+ LG GQFG ++ N++ + A K++ KP + + + L +V
Sbjct: 12 KKLGAGQFGEVWMGYYNNSTK-VAVKTL--KPGTMSVQAFLEEANLMKTLQ---HDKLVR 65
Query: 89 FKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVN-AVNVCHSMGVM- 146
+ E ++++ E G L D + S+ +L +++ + + M +
Sbjct: 66 LYAVVTKEEPIYIITEYMAKGSLLDFL-----KSDEGGKVLLPKLIDFSAQIAEGMAYIE 120
Query: 147 -----HRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYI---APEVL 198
HRDL+ N + ++ + K+ DFG A + E+ + Y G+ F I APE +
Sbjct: 121 RKNYIHRDLRAAN---VLVSESLMCKIADFGLARVIEDNE-YTAREGAKFPIKWTAPEAI 176
Query: 199 RRRYGK---EIDIWSAGVILY-ILLSGVPPFWAETKKGTYDAILQG 240
+G + D+WS G++LY I+ G P+ + A+ +G
Sbjct: 177 N--FGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSDVMSALQRG 220
|
Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lyn is expressed in B lymphocytes and myeloid cells. It exhibits both positive and negative regulatory roles in B cell receptor (BCR) signaling. Lyn, as well as Fyn and Blk, promotes B cell activation by phosphorylating ITAMs (immunoreceptor tyr activation motifs) in CD19 and in Ig components of BCR. It negatively regulates signaling by its unique ability to phosphorylate ITIMs (immunoreceptor tyr inhibition motifs) in cell surface receptors like CD22 and CD5. Lyn also plays an important role in G-CSF receptor signaling by phosphorylating a variety of adaptor molecules. Length = 261 |
| >gnl|CDD|178763 PLN03224, PLN03224, probable serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 40.8 bits (95), Expect = 0.001
Identities = 17/48 (35%), Positives = 31/48 (64%), Gaps = 3/48 (6%)
Query: 128 TVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSAL 175
V+R ++ + H +G++HRD+KPEN ++ D +K+ DFG+A+
Sbjct: 313 GVMRQVLTGLRKLHRIGIVHRDIKPENL-LVTVDGQ--VKIIDFGAAV 357
|
Length = 507 |
| >gnl|CDD|205583 pfam13405, EF_hand_4, EF-hand domain | Back alignment and domain information |
|---|
Score = 35.6 bits (83), Expect = 0.002
Identities = 12/29 (41%), Positives = 17/29 (58%)
Query: 328 LKEKFIEMDTDKNGTLSYDELRAGLTKVG 356
L+E F D D +G +S +ELR L +G
Sbjct: 2 LREAFKLFDKDGDGYISAEELRKALRSLG 30
|
Length = 30 |
| >gnl|CDD|133233 cd05102, PTKc_VEGFR3, Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Score = 40.0 bits (93), Expect = 0.002
Identities = 57/275 (20%), Positives = 106/275 (38%), Gaps = 84/275 (30%)
Query: 27 FGRMLGRGQFGVSYLCTENSTNRPYACKSIAKK---PKMRLAENDMIRREIQIRLYLSGQ 83
G++LG G FG + ++ +C ++A K +E+ + E++I +++
Sbjct: 11 LGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNH 70
Query: 84 PNVVEF-KSTYEDETAVHVVMELCEGGDLFDRIIAK--GYNSERDAATVLRAIVNAVN-- 138
NVV + + + V++E C+ G+L + + AK ++ R+ + R A+
Sbjct: 71 LNVVNLLGACTKPNGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQ 130
Query: 139 ----------------------------------------------VCHSMGV------- 145
+C+S V
Sbjct: 131 SRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETDDLWKSPLTMEDLICYSFQVARGMEFL 190
Query: 146 -----MHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRD--IVGSGF------Y 192
+HRDL N I +N ++K+ DFG A +Y+D V G +
Sbjct: 191 ASRKCIHRDLAARN---ILLSENNVVKICDFGLAR-----DIYKDPDYVRKGSARLPLKW 242
Query: 193 IAPE-VLRRRYGKEIDIWSAGVILYILLS-GVPPF 225
+APE + + Y + D+WS GV+L+ + S G P+
Sbjct: 243 MAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPY 277
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. VEGFR3 preferentially binds the ligands VEGFC and VEGFD. VEGFR3 is essential for lymphatic endothelial cell (EC) development and function. It has been shown to regulate adaptive immunity during corneal transplantation. VEGFR3 is upregulated on blood vascular ECs in pathological conditions such as vascular tumors and the periphery of solid tumors. It plays a role in cancer progression and lymph node metastasis. Missense mutations in the VEGFR3 gene are associated with primary human lymphedema. Length = 338 |
| >gnl|CDD|238009 cd00052, EH, Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction | Back alignment and domain information |
|---|
Score = 36.0 bits (84), Expect = 0.002
Identities = 19/65 (29%), Positives = 28/65 (43%), Gaps = 2/65 (3%)
Query: 394 EKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMT 453
+ FR +D D ++ E + L K G L S + Q + D D +G +D EF M
Sbjct: 3 QIFRSLDPDGDGLISGDEARPFLGKSG--LPRSVLAQIWDLADTDKDGKLDKEEFAIAMH 60
Query: 454 DIYKL 458
I
Sbjct: 61 LIALA 65
|
The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A hydrophobic binding pocket is formed by residues from both EF-hand motifs. The EH domain binds to proteins containing NPF (class I), [WF]W or SWG (class II), or H[TS]F (class III) sequence motifs. Length = 67 |
| >gnl|CDD|238008 cd00051, EFh, EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands | Back alignment and domain information |
|---|
Score = 35.6 bits (83), Expect = 0.003
Identities = 10/41 (24%), Positives = 20/41 (48%), Gaps = 3/41 (7%)
Query: 313 IKVIVEYLPDEETQALKEKFIEMDTDKNGTLSYDELRAGLT 353
+K + E L +EE + E+D D +G + ++E +
Sbjct: 26 LKSLGEGLSEEEIDEM---IREVDKDGDGKIDFEEFLELMA 63
|
Ca2+ binding induces a conformational change in the EF-hand motif, leading to the activation or inactivation of target proteins. EF-hands tend to occur in pairs or higher copy numbers. Length = 63 |
| >gnl|CDD|205583 pfam13405, EF_hand_4, EF-hand domain | Back alignment and domain information |
|---|
Score = 34.9 bits (81), Expect = 0.003
Identities = 10/30 (33%), Positives = 15/30 (50%)
Query: 391 KLMEKFREMDTDNSDTLTLSELKAGLAKLG 420
+L E F+ D D ++ EL+ L LG
Sbjct: 1 ELREAFKLFDKDGDGYISAEELRKALRSLG 30
|
Length = 30 |
| >gnl|CDD|240159 cd05120, APH_ChoK_like, Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family | Back alignment and domain information |
|---|
Score = 38.2 bits (89), Expect = 0.003
Identities = 33/148 (22%), Positives = 53/148 (35%), Gaps = 27/148 (18%)
Query: 34 GQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQ----PNVVEF 89
G YL + Y + K R D RE+ I L+ + P V+
Sbjct: 9 GLTNRVYLLGTK--DEDY----VLKINPSREKGADR-EREVAILQLLARKGLPVPKVLAS 61
Query: 90 KSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSM---GVM 146
E + +++ME EG L + + + A +L + H + +
Sbjct: 62 ---GESDGWSYLLMEWIEGETLDEVSEEEKEDIAEQLAELLAKL-------HQLPLLVLC 111
Query: 147 HRDLKPENFSFISRDDNALLKVTDFGSA 174
H DL P N I DD +L + D+ A
Sbjct: 112 HGDLHPGN---ILVDDGKILGIIDWEYA 136
|
The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves as precursors to the synthesis of important biological compounds, such as the major phospholipids, phosphatidylcholine and phosphatidylethanolamine and the amino acids, threonine, methionine, and isoleucine. Length = 155 |
| >gnl|CDD|88330 cd05047, PTKc_Tie, Catalytic domain of Tie Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 38.9 bits (90), Expect = 0.003
Identities = 59/273 (21%), Positives = 109/273 (39%), Gaps = 38/273 (13%)
Query: 30 MLGRGQFG--VSYLCTENSTNRPYACKSIAKKPKMRLAENDM--IRREIQIRLYLSGQPN 85
++G G FG + ++ A K + K +++D E+++ L PN
Sbjct: 2 VIGEGNFGQVLKARIKKDGLRMDAAIKRM----KEYASKDDHRDFAGELEVLCKLGHHPN 57
Query: 86 VVEFKSTYEDETAVHVVMELCEGGDLFD-----RIIAK--------GYNSERDAATVLRA 132
++ E +++ +E G+L D R++ S + +L
Sbjct: 58 IINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHF 117
Query: 133 IVNAVNVCHSMG---VMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVY-RDIVG 188
+ + +HRDL N I +N + K+ DFG L +VY + +G
Sbjct: 118 AADVARGMDYLSQKQFIHRDLAARN---ILVGENYVAKIADFG---LSRGQEVYVKKTMG 171
Query: 189 S--GFYIAPEVLRRR-YGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQGEIDF 244
++A E L Y D+WS GV+L+ ++S G P+ T Y+ + QG +
Sbjct: 172 RLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQG---Y 228
Query: 245 DTDPWPSISSTAKDLVRRMLTKDPKRRITAAQV 277
+ + DL+R+ + P R + AQ+
Sbjct: 229 RLEKPLNCDDEVYDLMRQCWREKPYERPSFAQI 261
|
Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific ligand has been identified for Tie1. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. In vivo studies of Tie1 show that it is critical in vascular development. Length = 270 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 477 | |||
| KOG0615 | 475 | consensus Serine/threonine protein kinase Chk2 and | 100.0 | |
| KOG0033 | 355 | consensus Ca2+/calmodulin-dependent protein kinase | 100.0 | |
| KOG0575 | 592 | consensus Polo-like serine/threonine protein kinas | 100.0 | |
| KOG0032 | 382 | consensus Ca2+/calmodulin-dependent protein kinase | 100.0 | |
| KOG0581 | 364 | consensus Mitogen-activated protein kinase kinase | 100.0 | |
| KOG0598 | 357 | consensus Ribosomal protein S6 kinase and related | 100.0 | |
| KOG0595 | 429 | consensus Serine/threonine-protein kinase involved | 100.0 | |
| KOG0592 | 604 | consensus 3-phosphoinositide-dependent protein kin | 100.0 | |
| KOG0588 | 786 | consensus Serine/threonine protein kinase [Cell cy | 100.0 | |
| KOG0593 | 396 | consensus Predicted protein kinase KKIAMRE [Genera | 100.0 | |
| KOG0616 | 355 | consensus cAMP-dependent protein kinase catalytic | 100.0 | |
| KOG0599 | 411 | consensus Phosphorylase kinase gamma subunit [Carb | 100.0 | |
| KOG0583 | 370 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG0605 | 550 | consensus NDR and related serine/threonine kinases | 100.0 | |
| KOG0661 | 538 | consensus MAPK related serine/threonine protein ki | 100.0 | |
| KOG0591 | 375 | consensus NIMA (never in mitosis)-related G2-speci | 100.0 | |
| KOG0604 | 400 | consensus MAP kinase-activated protein kinase 2 [S | 100.0 | |
| KOG0659 | 318 | consensus Cdk activating kinase (CAK)/RNA polymera | 100.0 | |
| KOG0597 | 808 | consensus Serine-threonine protein kinase FUSED [G | 100.0 | |
| KOG0611 | 668 | consensus Predicted serine/threonine protein kinas | 100.0 | |
| KOG0660 | 359 | consensus Mitogen-activated protein kinase [Signal | 100.0 | |
| KOG0578 | 550 | consensus p21-activated serine/threonine protein k | 100.0 | |
| KOG0198 | 313 | consensus MEKK and related serine/threonine protei | 100.0 | |
| KOG0600 | 560 | consensus Cdc2-related protein kinase [Cell cycle | 100.0 | |
| KOG0663 | 419 | consensus Protein kinase PITSLRE and related kinas | 100.0 | |
| KOG0580 | 281 | consensus Serine/threonine protein kinase [Cell cy | 100.0 | |
| KOG0582 | 516 | consensus Ste20-like serine/threonine protein kina | 100.0 | |
| KOG0585 | 576 | consensus Ca2+/calmodulin-dependent protein kinase | 100.0 | |
| KOG0694 | 694 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG0201 | 467 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd05612 | 291 | STKc_PRKX_like Catalytic domain of PRKX-like Prote | 100.0 | |
| KOG0607 | 463 | consensus MAP kinase-interacting kinase and relate | 100.0 | |
| PTZ00263 | 329 | protein kinase A catalytic subunit; Provisional | 100.0 | |
| cd05628 | 363 | STKc_NDR1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05571 | 323 | STKc_PKB Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd05599 | 364 | STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel | 100.0 | |
| cd05631 | 285 | STKc_GRK4 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05600 | 333 | STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- | 100.0 | |
| PTZ00426 | 340 | cAMP-dependent protein kinase catalytic subunit; P | 100.0 | |
| KOG0610 | 459 | consensus Putative serine/threonine protein kinase | 100.0 | |
| KOG0594 | 323 | consensus Protein kinase PCTAIRE and related kinas | 100.0 | |
| cd05585 | 312 | STKc_YPK1_like Catalytic domain of Yeast Protein K | 100.0 | |
| cd05625 | 382 | STKc_LATS1 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05626 | 381 | STKc_LATS2 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05629 | 377 | STKc_NDR_like_fungal Catalytic domain of Fungal Nu | 100.0 | |
| cd05598 | 376 | STKc_LATS Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG0658 | 364 | consensus Glycogen synthase kinase-3 [Carbohydrate | 100.0 | |
| cd05596 | 370 | STKc_ROCK Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05590 | 320 | STKc_nPKC_eta Catalytic domain of the Protein Seri | 100.0 | |
| cd05593 | 328 | STKc_PKB_gamma Catalytic domain of the Protein Ser | 100.0 | |
| cd05621 | 370 | STKc_ROCK2 Catalytic domain of the Protein Serine/ | 100.0 | |
| KOG4717 | 864 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd05573 | 350 | STKc_ROCK_NDR_like Catalytic domain of ROCK- and N | 100.0 | |
| cd05587 | 324 | STKc_cPKC Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07871 | 288 | STKc_PCTAIRE3 Catalytic domain of the Serine/Threo | 100.0 | |
| cd05591 | 321 | STKc_nPKC_epsilon Catalytic domain of the Protein | 100.0 | |
| cd05595 | 323 | STKc_PKB_beta Catalytic domain of the Protein Seri | 100.0 | |
| cd05627 | 360 | STKc_NDR2 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05616 | 323 | STKc_cPKC_beta Catalytic domain of the Protein Ser | 100.0 | |
| cd05601 | 330 | STKc_CRIK Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05588 | 329 | STKc_aPKC Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05620 | 316 | STKc_nPKC_delta Catalytic domain of the Protein Se | 100.0 | |
| cd05592 | 316 | STKc_nPKC_theta_delta Catalytic domain of the Prot | 100.0 | |
| cd05622 | 371 | STKc_ROCK1 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05570 | 318 | STKc_PKC Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd05594 | 325 | STKc_PKB_alpha Catalytic domain of the Protein Ser | 100.0 | |
| cd05614 | 332 | STKc_MSK2_N N-terminal catalytic domain of the Pro | 100.0 | |
| cd07848 | 287 | STKc_CDKL5 Catalytic domain of the Serine/Threonin | 100.0 | |
| cd05618 | 329 | STKc_aPKC_iota Catalytic domain of the Protein Ser | 100.0 | |
| KOG0667 | 586 | consensus Dual-specificity tyrosine-phosphorylatio | 100.0 | |
| KOG0192 | 362 | consensus Tyrosine kinase specific for activated ( | 100.0 | |
| KOG0589 | 426 | consensus Serine/threonine protein kinase [General | 100.0 | |
| cd05619 | 316 | STKc_nPKC_theta Catalytic domain of the Protein Se | 100.0 | |
| cd05589 | 324 | STKc_PKN Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd05575 | 323 | STKc_SGK Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd07869 | 303 | STKc_PFTAIRE1 Catalytic domain of the Serine/Threo | 100.0 | |
| cd05615 | 323 | STKc_cPKC_alpha Catalytic domain of the Protein Se | 100.0 | |
| cd05605 | 285 | STKc_GRK4_like Catalytic domain of G protein-coupl | 100.0 | |
| cd05584 | 323 | STKc_p70S6K Catalytic domain of the Protein Serine | 100.0 | |
| cd05586 | 330 | STKc_Sck1_like Catalytic domain of Suppressor of l | 100.0 | |
| cd05597 | 331 | STKc_DMPK_like Catalytic domain of Myotonic Dystro | 100.0 | |
| cd07862 | 290 | STKc_CDK6 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd07859 | 338 | STKc_TDY_MAPK_plant Catalytic domain of the Serine | 100.0 | |
| cd05617 | 327 | STKc_aPKC_zeta Catalytic domain of the Protein Ser | 100.0 | |
| cd05604 | 325 | STKc_SGK3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05608 | 280 | STKc_GRK1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05602 | 325 | STKc_SGK1 Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG4236 | 888 | consensus Serine/threonine protein kinase PKC mu/P | 100.0 | |
| cd06649 | 331 | PKc_MEK2 Catalytic domain of the dual-specificity | 100.0 | |
| PTZ00036 | 440 | glycogen synthase kinase; Provisional | 100.0 | |
| cd05603 | 321 | STKc_SGK2 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05624 | 331 | STKc_MRCK_beta Catalytic domain of the Protein Ser | 100.0 | |
| cd05623 | 332 | STKc_MRCK_alpha Catalytic domain of the Protein Se | 100.0 | |
| cd05630 | 285 | STKc_GRK6 Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG0577 | 948 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd05582 | 318 | STKc_RSK_N N-terminal catalytic domain of the Prot | 100.0 | |
| cd07863 | 288 | STKc_CDK4 Catalytic domain of the Serine/Threonine | 100.0 | |
| KOG0574 | 502 | consensus STE20-like serine/threonine kinase MST [ | 100.0 | |
| PLN00034 | 353 | mitogen-activated protein kinase kinase; Provision | 100.0 | |
| KOG0586 | 596 | consensus Serine/threonine protein kinase [General | 100.0 | |
| PHA03212 | 391 | serine/threonine kinase US3; Provisional | 100.0 | |
| KOG0197 | 468 | consensus Tyrosine kinases [Signal transduction me | 100.0 | |
| cd07876 | 359 | STKc_JNK2 Catalytic domain of the Serine/Threonine | 100.0 | |
| KOG0579 | 1187 | consensus Ste20-like serine/threonine protein kina | 100.0 | |
| cd05607 | 277 | STKc_GRK7 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07872 | 309 | STKc_PCTAIRE2 Catalytic domain of the Serine/Threo | 100.0 | |
| PF00069 | 260 | Pkinase: Protein kinase domain Protein kinase; unc | 100.0 | |
| KOG0690 | 516 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd05632 | 285 | STKc_GRK5 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07875 | 364 | STKc_JNK1 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd06650 | 333 | PKc_MEK1 Catalytic domain of the dual-specificity | 100.0 | |
| PTZ00266 | 1021 | NIMA-related protein kinase; Provisional | 100.0 | |
| cd07874 | 355 | STKc_JNK3 Catalytic domain of the Serine/Threonine | 100.0 | |
| PTZ00267 | 478 | NIMA-related protein kinase; Provisional | 100.0 | |
| PTZ00283 | 496 | serine/threonine protein kinase; Provisional | 100.0 | |
| cd07853 | 372 | STKc_NLK Catalytic domain of the Serine/Threonine | 100.0 | |
| KOG0612 | 1317 | consensus Rho-associated, coiled-coil containing p | 100.0 | |
| cd05580 | 290 | STKc_PKA Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd06609 | 274 | STKc_MST3_like Catalytic domain of Mammalian Ste20 | 100.0 | |
| cd07878 | 343 | STKc_p38beta_MAPK11 Catalytic domain of the Serine | 100.0 | |
| cd06645 | 267 | STKc_MAP4K3 Catalytic domain of the Protein Serine | 100.0 | |
| cd06625 | 263 | STKc_MEKK3_like Catalytic domain of MAP/ERK kinase | 100.0 | |
| cd07873 | 301 | STKc_PCTAIRE1 Catalytic domain of the Serine/Threo | 100.0 | |
| PTZ00284 | 467 | protein kinase; Provisional | 100.0 | |
| cd05611 | 260 | STKc_Rim15_like Catalytic domain of fungal Rim15-l | 100.0 | |
| cd05102 | 338 | PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd06611 | 280 | STKc_SLK_like Catalytic domain of Ste20-like kinas | 100.0 | |
| cd07868 | 317 | STKc_CDK8 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd06637 | 272 | STKc_TNIK Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06654 | 296 | STKc_PAK1 Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG0596 | 677 | consensus Dual specificity; serine/threonine and t | 100.0 | |
| KOG1989 | 738 | consensus ARK protein kinase family [Signal transd | 100.0 | |
| cd06646 | 267 | STKc_MAP4K5 Catalytic domain of the Protein Serine | 100.0 | |
| cd07847 | 286 | STKc_CDKL1_4 Catalytic domain of the Serine/Threon | 100.0 | |
| cd06615 | 308 | PKc_MEK Catalytic domain of the dual-specificity P | 100.0 | |
| cd05609 | 305 | STKc_MAST Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06643 | 282 | STKc_SLK Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd05574 | 316 | STKc_phototropin_like Catalytic domain of Phototro | 100.0 | |
| cd07861 | 285 | STKc_CDK1_euk Catalytic domain of the Serine/Threo | 100.0 | |
| cd06644 | 292 | STKc_STK10_LOK Catalytic domain of the Protein Ser | 100.0 | |
| PHA02988 | 283 | hypothetical protein; Provisional | 100.0 | |
| cd05578 | 258 | STKc_Yank1 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd06610 | 267 | STKc_OSR1_SPAK Catalytic domain of the Protein Ser | 100.0 | |
| cd05577 | 277 | STKc_GRK Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd06628 | 267 | STKc_MAPKKK_Byr2_like Catalytic domain of fungal B | 100.0 | |
| cd06619 | 279 | PKc_MKK5 Catalytic domain of the dual-specificity | 100.0 | |
| cd08227 | 327 | PK_STRAD_alpha Pseudokinase domain of STE20-relate | 100.0 | |
| cd08223 | 257 | STKc_Nek4 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05572 | 262 | STKc_cGK_PKG Catalytic domain of the Protein Serin | 100.0 | |
| cd08529 | 256 | STKc_FA2-like Catalytic domain of the Protein Seri | 100.0 | |
| PHA03390 | 267 | pk1 serine/threonine-protein kinase 1; Provisional | 100.0 | |
| cd06656 | 297 | STKc_PAK3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07839 | 284 | STKc_CDK5 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd06655 | 296 | STKc_PAK2 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06622 | 286 | PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS | 100.0 | |
| cd06613 | 262 | STKc_MAP4K3_like Catalytic domain of Mitogen-activ | 100.0 | |
| cd05633 | 279 | STKc_GRK3 Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG0983 | 391 | consensus Mitogen-activated protein kinase (MAPK) | 100.0 | |
| KOG0662 | 292 | consensus Cyclin-dependent kinase CDK5 [Intracellu | 100.0 | |
| cd06631 | 265 | STKc_YSK4 Catalytic domain of the Protein Serine/T | 100.0 | |
| PHA03209 | 357 | serine/threonine kinase US3; Provisional | 100.0 | |
| KOG4279 | 1226 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd06607 | 307 | STKc_TAO Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd06639 | 291 | STKc_myosinIIIB Catalytic domain of the Protein Se | 100.0 | |
| KOG0986 | 591 | consensus G protein-coupled receptor kinase [Signa | 100.0 | |
| cd06608 | 275 | STKc_myosinIII_like Catalytic domain of Class III | 100.0 | |
| PHA03207 | 392 | serine/threonine kinase US3; Provisional | 100.0 | |
| cd08221 | 256 | STKc_Nek9 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06636 | 282 | STKc_MAP4K4_6 Catalytic domain of the Protein Seri | 100.0 | |
| cd07841 | 298 | STKc_CDK7 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd06612 | 256 | STKc_MST1_2 Catalytic domain of the Protein Serine | 100.0 | |
| cd06638 | 286 | STKc_myosinIIIA Catalytic domain of the Protein Se | 100.0 | |
| cd06640 | 277 | STKc_MST4 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06629 | 272 | STKc_MAPKKK_Bck1_like Catalytic domain of fungal B | 100.0 | |
| cd07832 | 286 | STKc_CCRK Catalytic domain of the Serine/Threonine | 100.0 | |
| cd06630 | 268 | STKc_MEKK1 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd07837 | 295 | STKc_CdkB_plant Catalytic domain of the Serine/Thr | 100.0 | |
| KOG0584 | 632 | consensus Serine/threonine protein kinase [General | 100.0 | |
| cd06617 | 283 | PKc_MKK3_6 Catalytic domain of the dual-specificit | 100.0 | |
| cd08220 | 256 | STKc_Nek8 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd08218 | 256 | STKc_Nek1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07845 | 309 | STKc_CDK10 Catalytic domain of the Serine/Threonin | 100.0 | |
| cd06651 | 266 | STKc_MEKK3 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd07831 | 282 | STKc_MOK Catalytic domain of the Serine/Threonine | 100.0 | |
| cd06626 | 264 | STKc_MEKK4 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd07846 | 286 | STKc_CDKL2_3 Catalytic domain of the Serine/Threon | 100.0 | |
| cd05106 | 374 | PTKc_CSF-1R Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd06632 | 258 | STKc_MEKK1_plant Catalytic domain of the Protein S | 100.0 | |
| cd06658 | 292 | STKc_PAK5 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05104 | 375 | PTKc_Kit Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd06652 | 265 | STKc_MEKK2 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd07843 | 293 | STKc_CDC2L1 Catalytic domain of the Serine/Threoni | 100.0 | |
| cd05606 | 278 | STKc_beta_ARK Catalytic domain of the Protein Seri | 100.0 | |
| cd07867 | 317 | STKc_CDC2L6 Catalytic domain of Serine/Threonine K | 100.0 | |
| cd06605 | 265 | PKc_MAPKK Catalytic domain of the dual-specificity | 100.0 | |
| cd06616 | 288 | PKc_MKK4 Catalytic domain of the dual-specificity | 100.0 | |
| PHA03211 | 461 | serine/threonine kinase US3; Provisional | 100.0 | |
| cd08217 | 265 | STKc_Nek2 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07850 | 353 | STKc_JNK Catalytic domain of the Serine/Threonine | 100.0 | |
| PRK13184 | 932 | pknD serine/threonine-protein kinase; Reviewed | 100.0 | |
| cd06917 | 277 | STKc_NAK1_like Catalytic domain of Fungal Nak1-lik | 100.0 | |
| cd05064 | 266 | PTKc_EphR_A10 Catalytic domain of the Protein Tyro | 100.0 | |
| KOG0603 | 612 | consensus Ribosomal protein S6 kinase [Signal tran | 100.0 | |
| cd07865 | 310 | STKc_CDK9 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05096 | 304 | PTKc_DDR1 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd06623 | 264 | PKc_MAPKK_plant_like Catalytic domain of Plant dua | 100.0 | |
| cd08228 | 267 | STKc_Nek6 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd08219 | 255 | STKc_Nek3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07860 | 284 | STKc_CDK2_3 Catalytic domain of the Serine/Threoni | 100.0 | |
| cd05088 | 303 | PTKc_Tie2 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd07844 | 291 | STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like | 100.0 | |
| cd06648 | 285 | STKc_PAK_II Catalytic domain of the Protein Serine | 100.0 | |
| cd06659 | 297 | STKc_PAK6 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06620 | 284 | PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr | 100.0 | |
| cd05581 | 280 | STKc_PDK1 Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG0696 | 683 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd05048 | 283 | PTKc_Ror Catalytic Domain of the Protein Tyrosine | 100.0 | |
| PLN00009 | 294 | cyclin-dependent kinase A; Provisional | 100.0 | |
| cd07833 | 288 | STKc_CDKL Catalytic domain of Cyclin-Dependent pro | 100.0 | |
| cd06635 | 317 | STKc_TAO1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06642 | 277 | STKc_STK25-YSK1 Catalytic domain of the Protein Se | 100.0 | |
| KOG0614 | 732 | consensus cGMP-dependent protein kinase [Signal tr | 100.0 | |
| cd07858 | 337 | STKc_TEY_MAPK_plant Catalytic domain of the Serine | 100.0 | |
| cd06633 | 313 | STKc_TAO3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07849 | 336 | STKc_ERK1_2_like Catalytic domain of Extracellular | 100.0 | |
| cd05579 | 265 | STKc_MAST_like Catalytic domain of Microtubule-ass | 100.0 | |
| cd06641 | 277 | STKc_MST3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd08229 | 267 | STKc_Nek7 Catalytic domain of the Protein Serine/T | 100.0 | |
| PTZ00024 | 335 | cyclin-dependent protein kinase; Provisional | 100.0 | |
| cd07836 | 284 | STKc_Pho85 Catalytic domain of the Serine/Threonin | 100.0 | |
| cd05613 | 290 | STKc_MSK1_N N-terminal catalytic domain of the Pro | 100.0 | |
| cd07855 | 334 | STKc_ERK5 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd06621 | 287 | PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek | 100.0 | |
| cd06634 | 308 | STKc_TAO2 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06647 | 293 | STKc_PAK_I Catalytic domain of the Protein Serine/ | 100.0 | |
| cd07842 | 316 | STKc_CDK8_like Catalytic domain of Cyclin-Dependen | 100.0 | |
| cd07870 | 291 | STKc_PFTAIRE2 Catalytic domain of the Serine/Threo | 100.0 | |
| cd07835 | 283 | STKc_CDK1_like Catalytic domain of Cyclin-Dependen | 100.0 | |
| KOG0666 | 438 | consensus Cyclin C-dependent kinase CDK8 [Transcri | 100.0 | |
| cd05049 | 280 | PTKc_Trk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05089 | 297 | PTKc_Tie1 Catalytic domain of the Protein Tyrosine | 100.0 | |
| KOG4721 | 904 | consensus Serine/threonine protein kinase, contain | 100.0 | |
| cd05105 | 400 | PTKc_PDGFR_alpha Catalytic domain of the Protein T | 100.0 | |
| cd08225 | 257 | STKc_Nek5 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05036 | 277 | PTKc_ALK_LTK Catalytic domain of the Protein Tyros | 100.0 | |
| PHA03210 | 501 | serine/threonine kinase US3; Provisional | 100.0 | |
| KOG2345 | 302 | consensus Serine/threonine protein kinase/TGF-beta | 100.0 | |
| cd05062 | 277 | PTKc_IGF-1R Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd06618 | 296 | PKc_MKK7 Catalytic domain of the dual-specificity | 100.0 | |
| cd06614 | 286 | STKc_PAK Catalytic domain of the Protein Serine/Th | 100.0 | |
| KOG0194 | 474 | consensus Protein tyrosine kinase [Signal transduc | 100.0 | |
| KOG0193 | 678 | consensus Serine/threonine protein kinase RAF [Sig | 100.0 | |
| cd06624 | 268 | STKc_ASK Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd08224 | 267 | STKc_Nek6_Nek7 Catalytic domain of the Protein Ser | 100.0 | |
| cd07880 | 343 | STKc_p38gamma_MAPK12 Catalytic domain of the Serin | 100.0 | |
| cd07838 | 287 | STKc_CDK4_6_like Catalytic domain of Cyclin-Depend | 100.0 | |
| cd07854 | 342 | STKc_MAPK4_6 Catalytic domain of the Serine/Threon | 100.0 | |
| cd08215 | 258 | STKc_Nek Catalytic domain of the Protein Serine/Th | 100.0 | |
| KOG0669 | 376 | consensus Cyclin T-dependent kinase CDK9 [Cell cyc | 100.0 | |
| KOG4645 | 1509 | consensus MAPKKK (MAP kinase kinase kinase) SSK2 a | 100.0 | |
| cd05052 | 263 | PTKc_Abl Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05054 | 337 | PTKc_VEGFR Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd06606 | 260 | STKc_MAPKKK Catalytic domain of the Protein Serine | 100.0 | |
| cd06653 | 264 | STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina | 100.0 | |
| cd05061 | 288 | PTKc_InsR Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd07840 | 287 | STKc_CDK9_like Catalytic domain of Cyclin-Dependen | 100.0 | |
| cd05093 | 288 | PTKc_TrkB Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05122 | 253 | PKc_STE Catalytic domain of STE family Protein Kin | 100.0 | |
| cd05114 | 256 | PTKc_Tec_Rlk Catalytic domain of the Protein Tyros | 100.0 | |
| cd07851 | 343 | STKc_p38 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd06627 | 254 | STKc_Cdc7_like Catalytic domain of Cell division c | 100.0 | |
| cd07834 | 330 | STKc_MAPK Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05098 | 307 | PTKc_FGFR1 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd07864 | 302 | STKc_CDK12 Catalytic domain of the Serine/Threonin | 100.0 | |
| cd05610 | 669 | STKc_MASTL Catalytic domain of the Protein Serine/ | 100.0 | |
| cd08226 | 328 | PK_STRAD_beta Pseudokinase domain of STE20-related | 100.0 | |
| cd05113 | 256 | PTKc_Btk_Bmx Catalytic domain of the Protein Tyros | 100.0 | |
| cd07852 | 337 | STKc_MAPK15 Catalytic domain of the Serine/Threoni | 100.0 | |
| cd05123 | 250 | STKc_AGC Catalytic domain of AGC family Protein Se | 100.0 | |
| cd05051 | 296 | PTKc_DDR Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05084 | 252 | PTKc_Fes Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd06657 | 292 | STKc_PAK4 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd00192 | 262 | PTKc Catalytic domain of Protein Tyrosine Kinases. | 100.0 | |
| cd07857 | 332 | STKc_MPK1 Catalytic domain of the Serine/Threonine | 100.0 | |
| KOG1035 | 1351 | consensus eIF-2alpha kinase GCN2 [Translation, rib | 100.0 | |
| cd05032 | 277 | PTKc_InsR_like Catalytic domain of Insulin Recepto | 100.0 | |
| KOG1151 | 775 | consensus Tousled-like protein kinase [Signal tran | 100.0 | |
| cd05055 | 302 | PTKc_PDGFR Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd08530 | 256 | STKc_CNK2-like Catalytic domain of the Protein Ser | 100.0 | |
| cd05583 | 288 | STKc_MSK_N N-terminal catalytic domain of the Prot | 100.0 | |
| cd05072 | 261 | PTKc_Lyn Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd07830 | 283 | STKc_MAK_like Catalytic domain of Male germ cell-A | 100.0 | |
| cd07877 | 345 | STKc_p38alpha_MAPK14 Catalytic domain of the Serin | 100.0 | |
| cd05053 | 293 | PTKc_FGFR Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd07866 | 311 | STKc_BUR1 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05091 | 283 | PTKc_Ror2 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05090 | 283 | PTKc_Ror1 Catalytic domain of the Protein Tyrosine | 100.0 | |
| PF07714 | 259 | Pkinase_Tyr: Protein tyrosine kinase Protein kinas | 100.0 | |
| cd05108 | 316 | PTKc_EGFR Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd07879 | 342 | STKc_p38delta_MAPK13 Catalytic domain of the Serin | 100.0 | |
| cd05118 | 283 | STKc_CMGC Catalytic domain of CMGC family Serine/T | 100.0 | |
| cd05059 | 256 | PTKc_Tec_like Catalytic domain of Tec-like Protein | 100.0 | |
| cd05116 | 257 | PTKc_Syk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05099 | 314 | PTKc_FGFR4 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05033 | 266 | PTKc_EphR Catalytic domain of Ephrin Receptor Prot | 100.0 | |
| cd05148 | 261 | PTKc_Srm_Brk Catalytic domain of the Protein Tyros | 100.0 | |
| cd05047 | 270 | PTKc_Tie Catalytic domain of Tie Protein Tyrosine | 100.0 | |
| cd05071 | 262 | PTKc_Src Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05068 | 261 | PTKc_Frk_like Catalytic domain of Fyn-related kina | 100.0 | |
| cd05101 | 304 | PTKc_FGFR2 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05035 | 273 | PTKc_Axl_like Catalytic Domain of Axl-like Protein | 100.0 | |
| cd05103 | 343 | PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi | 100.0 | |
| KOG4250 | 732 | consensus TANK binding protein kinase TBK1 [Signal | 100.0 | |
| cd05094 | 291 | PTKc_TrkC Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05080 | 283 | PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the | 100.0 | |
| KOG0671 | 415 | consensus LAMMER dual specificity kinases [Signal | 100.0 | |
| cd05092 | 280 | PTKc_TrkA Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05109 | 279 | PTKc_HER2 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05075 | 272 | PTKc_Axl Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd07856 | 328 | STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre | 100.0 | |
| cd05070 | 260 | PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros | 100.0 | |
| cd05066 | 267 | PTKc_EphR_A Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd07829 | 282 | STKc_CDK_like Catalytic domain of Cyclin-Dependent | 100.0 | |
| cd08216 | 314 | PK_STRAD Pseudokinase domain of STE20-related kina | 100.0 | |
| cd05060 | 257 | PTKc_Syk_like Catalytic domain of Spleen Tyrosine | 100.0 | |
| cd05107 | 401 | PTKc_PDGFR_beta Catalytic domain of the Protein Ty | 100.0 | |
| cd08222 | 260 | STKc_Nek11 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05100 | 334 | PTKc_FGFR3 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05067 | 260 | PTKc_Lck_Blk Catalytic domain of the Protein Tyros | 100.0 | |
| cd05115 | 257 | PTKc_Zap-70 Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd05039 | 256 | PTKc_Csk_like Catalytic domain of C-terminal Src k | 100.0 | |
| smart00219 | 258 | TyrKc Tyrosine kinase, catalytic domain. Phosphotr | 100.0 | |
| cd05045 | 290 | PTKc_RET Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05065 | 269 | PTKc_EphR_B Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd05097 | 295 | PTKc_DDR_like Catalytic domain of Discoidin Domain | 100.0 | |
| cd05111 | 279 | PTK_HER3 Pseudokinase domain of the Protein Tyrosi | 100.0 | |
| cd05082 | 256 | PTKc_Csk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05034 | 261 | PTKc_Src_like Catalytic domain of Src kinase-like | 100.0 | |
| cd05069 | 260 | PTKc_Yes Catalytic domain of the Protein Tyrosine | 100.0 | |
| KOG0608 | 1034 | consensus Warts/lats-like serine threonine kinases | 100.0 | |
| KOG0695 | 593 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG0587 | 953 | consensus Traf2- and Nck-interacting kinase and re | 100.0 | |
| cd05050 | 288 | PTKc_Musk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05063 | 268 | PTKc_EphR_A2 Catalytic domain of the Protein Tyros | 100.0 | |
| cd05046 | 275 | PTK_CCK4 Pseudokinase domain of the Protein Tyrosi | 100.0 | |
| cd05040 | 257 | PTKc_Ack_like Catalytic domain of the Protein Tyro | 100.0 | |
| cd05057 | 279 | PTKc_EGFR_like Catalytic domain of Epidermal Growt | 100.0 | |
| cd05073 | 260 | PTKc_Hck Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05056 | 270 | PTKc_FAK Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd08528 | 269 | STKc_Nek10 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05085 | 250 | PTKc_Fer Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05112 | 256 | PTKc_Itk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05095 | 296 | PTKc_DDR2 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05576 | 237 | STKc_RPK118_like Catalytic domain of the Protein S | 100.0 | |
| cd05043 | 280 | PTK_Ryk Pseudokinase domain of Ryk (Receptor relat | 100.0 | |
| cd05078 | 258 | PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain | 100.0 | |
| cd05041 | 251 | PTKc_Fes_like Catalytic domain of Fes-like Protein | 100.0 | |
| cd05079 | 284 | PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the | 100.0 | |
| cd05087 | 269 | PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein | 100.0 | |
| cd05083 | 254 | PTKc_Chk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05042 | 269 | PTKc_Aatyk Catalytic domain of the Protein Tyrosin | 100.0 | |
| PHA02882 | 294 | putative serine/threonine kinase; Provisional | 100.0 | |
| cd05077 | 262 | PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th | 100.0 | |
| cd05037 | 259 | PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the | 100.0 | |
| KOG1026 | 774 | consensus Nerve growth factor receptor TRKA and re | 100.0 | |
| cd05076 | 274 | PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th | 100.0 | |
| cd05081 | 284 | PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of | 100.0 | |
| KOG1006 | 361 | consensus Mitogen-activated protein kinase (MAPK) | 100.0 | |
| KOG0668 | 338 | consensus Casein kinase II, alpha subunit [Signal | 100.0 | |
| cd05110 | 303 | PTKc_HER4 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05044 | 269 | PTKc_c-ros Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05058 | 262 | PTKc_Met_Ron Catalytic domain of the Protein Tyros | 100.0 | |
| cd05086 | 268 | PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd05074 | 273 | PTKc_Tyro3 Catalytic domain of the Protein Tyrosin | 100.0 | |
| PLN03225 | 566 | Serine/threonine-protein kinase SNT7; Provisional | 100.0 | |
| cd05038 | 284 | PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P | 100.0 | |
| KOG1095 | 1025 | consensus Protein tyrosine kinase [Signal transduc | 100.0 | |
| KOG0665 | 369 | consensus Jun-N-terminal kinase (JNK) [Signal tran | 100.0 | |
| KOG1187 | 361 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG4257 | 974 | consensus Focal adhesion tyrosine kinase FAK, cont | 100.0 | |
| KOG0670 | 752 | consensus U4/U6-associated splicing factor PRP4 [R | 100.0 | |
| KOG1290 | 590 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| smart00220 | 244 | S_TKc Serine/Threonine protein kinases, catalytic | 100.0 | |
| KOG0664 | 449 | consensus Nemo-like MAPK-related serine/threonine | 100.0 | |
| PLN03224 | 507 | probable serine/threonine protein kinase; Provisio | 100.0 | |
| KOG0199 | 1039 | consensus ACK and related non-receptor tyrosine ki | 100.0 | |
| KOG1027 | 903 | consensus Serine/threonine protein kinase and endo | 100.0 | |
| KOG0196 | 996 | consensus Tyrosine kinase, EPH (ephrin) receptor f | 100.0 | |
| KOG1094 | 807 | consensus Discoidin domain receptor DDR1 [Signal t | 100.0 | |
| KOG4278 | 1157 | consensus Protein tyrosine kinase [Signal transduc | 100.0 | |
| KOG0576 | 829 | consensus Mitogen-activated protein kinase kinase | 100.0 | |
| KOG0984 | 282 | consensus Mitogen-activated protein kinase (MAPK) | 100.0 | |
| PLN00113 | 968 | leucine-rich repeat receptor-like protein kinase; | 100.0 | |
| KOG1167 | 418 | consensus Serine/threonine protein kinase of the C | 100.0 | |
| KOG1152 | 772 | consensus Signal transduction serine/threonine kin | 100.0 | |
| KOG0200 | 609 | consensus Fibroblast/platelet-derived growth facto | 100.0 | |
| KOG1345 | 378 | consensus Serine/threonine kinase [Signal transduc | 100.0 | |
| KOG2052 | 513 | consensus Activin A type IB receptor, serine/threo | 100.0 | |
| KOG1025 | 1177 | consensus Epidermal growth factor receptor EGFR an | 100.0 | |
| KOG3653 | 534 | consensus Transforming growth factor beta/activin | 100.0 | |
| cd00180 | 215 | PKc Catalytic domain of Protein Kinases. Protein K | 99.98 | |
| smart00221 | 225 | STYKc Protein kinase; unclassified specificity. Ph | 99.97 | |
| PLN00181 | 793 | protein SPA1-RELATED; Provisional | 99.97 | |
| KOG1024 | 563 | consensus Receptor-like protein tyrosine kinase RY | 99.96 | |
| smart00750 | 176 | KIND kinase non-catalytic C-lobe domain. It is an | 99.96 | |
| KOG0590 | 601 | consensus Checkpoint kinase and related serine/thr | 99.95 | |
| COG0515 | 384 | SPS1 Serine/threonine protein kinase [General func | 99.95 | |
| KOG1164 | 322 | consensus Casein kinase (serine/threonine/tyrosine | 99.95 | |
| PRK09188 | 365 | serine/threonine protein kinase; Provisional | 99.95 | |
| KOG1163 | 341 | consensus Casein kinase (serine/threonine/tyrosine | 99.94 | |
| KOG0603 | 612 | consensus Ribosomal protein S6 kinase [Signal tran | 99.94 | |
| KOG1165 | 449 | consensus Casein kinase (serine/threonine/tyrosine | 99.92 | |
| KOG4158 | 598 | consensus BRPK/PTEN-induced protein kinase [Signal | 99.92 | |
| PRK10359 | 232 | lipopolysaccharide core biosynthesis protein; Prov | 99.92 | |
| PF14531 | 288 | Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_ | 99.92 | |
| cd05147 | 190 | RIO1_euk RIO kinase family; eukaryotic RIO1, catal | 99.91 | |
| KOG1240 | 1431 | consensus Protein kinase containing WD40 repeats [ | 99.91 | |
| KOG0606 | 1205 | consensus Microtubule-associated serine/threonine | 99.91 | |
| cd05145 | 190 | RIO1_like RIO kinase family; RIO1, RIO3 and simila | 99.9 | |
| PRK12274 | 218 | serine/threonine protein kinase; Provisional | 99.9 | |
| PRK10345 | 210 | hypothetical protein; Provisional | 99.88 | |
| COG5126 | 160 | FRQ1 Ca2+-binding protein (EF-Hand superfamily) [S | 99.88 | |
| KOG0195 | 448 | consensus Integrin-linked kinase [Signal transduct | 99.86 | |
| smart00090 | 237 | RIO RIO-like kinase. | 99.85 | |
| KOG1166 | 974 | consensus Mitotic checkpoint serine/threonine prot | 99.85 | |
| KOG0590 | 601 | consensus Checkpoint kinase and related serine/thr | 99.85 | |
| KOG0027 | 151 | consensus Calmodulin and related proteins (EF-Hand | 99.84 | |
| KOG1033 | 516 | consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati | 99.83 | |
| PRK14879 | 211 | serine/threonine protein kinase; Provisional | 99.81 | |
| TIGR03724 | 199 | arch_bud32 Kae1-associated kinase Bud32. Members o | 99.8 | |
| KOG1023 | 484 | consensus Natriuretic peptide receptor, guanylate | 99.79 | |
| cd05144 | 198 | RIO2_C RIO kinase family; RIO2, C-terminal catalyt | 99.79 | |
| KOG0028 | 172 | consensus Ca2+-binding protein (centrin/caltractin | 99.78 | |
| KOG0031 | 171 | consensus Myosin regulatory light chain, EF-Hand p | 99.77 | |
| PRK09605 | 535 | bifunctional UGMP family protein/serine/threonine | 99.77 | |
| cd05119 | 187 | RIO RIO kinase family, catalytic domain. The RIO k | 99.76 | |
| COG5126 | 160 | FRQ1 Ca2+-binding protein (EF-Hand superfamily) [S | 99.74 | |
| KOG0601 | 524 | consensus Cyclin-dependent kinase WEE1 [Cell cycle | 99.72 | |
| KOG0037 | 221 | consensus Ca2+-binding protein, EF-Hand protein su | 99.71 | |
| PRK01723 | 239 | 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed | 99.7 | |
| KOG0027 | 151 | consensus Calmodulin and related proteins (EF-Hand | 99.68 | |
| cd05120 | 155 | APH_ChoK_like Aminoglycoside 3'-phosphotransferase | 99.68 | |
| KOG0606 | 1205 | consensus Microtubule-associated serine/threonine | 99.67 | |
| KOG0030 | 152 | consensus Myosin essential light chain, EF-Hand pr | 99.67 | |
| PTZ00184 | 149 | calmodulin; Provisional | 99.65 | |
| PTZ00183 | 158 | centrin; Provisional | 99.65 | |
| KOG1266 | 458 | consensus Protein kinase [Signal transduction mech | 99.58 | |
| PRK04750 | 537 | ubiB putative ubiquinone biosynthesis protein UbiB | 99.57 | |
| KOG0031 | 171 | consensus Myosin regulatory light chain, EF-Hand p | 99.57 | |
| KOG0028 | 172 | consensus Ca2+-binding protein (centrin/caltractin | 99.57 | |
| TIGR01982 | 437 | UbiB 2-polyprenylphenol 6-hydroxylase. This model | 99.54 | |
| cd05146 | 197 | RIO3_euk RIO kinase family; eukaryotic RIO3, catal | 99.54 | |
| KOG1243 | 690 | consensus Protein kinase [General function predict | 99.51 | |
| KOG0601 | 524 | consensus Cyclin-dependent kinase WEE1 [Cell cycle | 99.49 | |
| cd05151 | 170 | ChoK Choline Kinase (ChoK). The ChoK subfamily is | 99.47 | |
| KOG0036 | 463 | consensus Predicted mitochondrial carrier protein | 99.46 | |
| KOG0034 | 187 | consensus Ca2+/calmodulin-dependent protein phosph | 99.43 | |
| KOG0030 | 152 | consensus Myosin essential light chain, EF-Hand pr | 99.41 | |
| cd05022 | 89 | S-100A13 S-100A13: S-100A13 domain found in protei | 99.4 | |
| PTZ00183 | 158 | centrin; Provisional | 99.37 | |
| COG3642 | 204 | Mn2+-dependent serine/threonine protein kinase [Si | 99.36 | |
| PTZ00184 | 149 | calmodulin; Provisional | 99.36 | |
| cd05027 | 88 | S-100B S-100B: S-100B domain found in proteins sim | 99.32 | |
| KOG3741 | 655 | consensus Poly(A) ribonuclease subunit [RNA proces | 99.32 | |
| PF13499 | 66 | EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A | 99.3 | |
| KOG3087 | 229 | consensus Serine/threonine protein kinase [General | 99.28 | |
| PLN02964 | 644 | phosphatidylserine decarboxylase | 99.27 | |
| cd05154 | 223 | ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an | 99.22 | |
| smart00027 | 96 | EH Eps15 homology domain. Pair of EF hand motifs t | 99.19 | |
| cd05025 | 92 | S-100A1 S-100A1: S-100A1 domain found in proteins | 99.17 | |
| cd05029 | 88 | S-100A6 S-100A6: S-100A6 domain found in proteins | 99.16 | |
| cd05026 | 93 | S-100Z S-100Z: S-100Z domain found in proteins sim | 99.16 | |
| cd05031 | 94 | S-100A10_like S-100A10_like: S-100A10 domain found | 99.16 | |
| cd00213 | 88 | S-100 S-100: S-100 domain, which represents the la | 99.11 | |
| PF14658 | 66 | EF-hand_9: EF-hand domain | 99.1 | |
| KOG0044 | 193 | consensus Ca2+ sensor (EF-Hand superfamily) [Signa | 99.09 | |
| PF01163 | 188 | RIO1: RIO1 family; InterPro: IPR018934 Protein pho | 99.08 | |
| COG4248 | 637 | Uncharacterized protein with protein kinase and he | 99.08 | |
| PLN02964 | 644 | phosphatidylserine decarboxylase | 99.07 | |
| cd00052 | 67 | EH Eps15 homology domain; found in proteins implic | 99.05 | |
| KOG4223 | 325 | consensus Reticulocalbin, calumenin, DNA supercoil | 99.03 | |
| cd05023 | 89 | S-100A11 S-100A11: S-100A11 domain found in protei | 99.01 | |
| KOG0044 | 193 | consensus Ca2+ sensor (EF-Hand superfamily) [Signa | 99.0 | |
| KOG2137 | 700 | consensus Protein kinase [Signal transduction mech | 98.99 | |
| PF13833 | 54 | EF-hand_8: EF-hand domain pair; PDB: 3KF9_A 1TTX_A | 98.99 | |
| PRK15123 | 268 | lipopolysaccharide core heptose(I) kinase RfaP; Pr | 98.99 | |
| KOG0576 | 829 | consensus Mitogen-activated protein kinase kinase | 98.92 | |
| cd00051 | 63 | EFh EF-hand, calcium binding motif; A diverse supe | 98.84 | |
| PF13499 | 66 | EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A | 98.84 | |
| KOG0034 | 187 | consensus Ca2+/calmodulin-dependent protein phosph | 98.83 | |
| COG0478 | 304 | RIO-like serine/threonine protein kinase fused to | 98.83 | |
| cd00252 | 116 | SPARC_EC SPARC_EC; extracellular Ca2+ binding doma | 98.83 | |
| PF06293 | 206 | Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; | 98.82 | |
| KOG0037 | 221 | consensus Ca2+-binding protein, EF-Hand protein su | 98.8 | |
| cd05030 | 88 | calgranulins Calgranulins: S-100 domain found in p | 98.77 | |
| KOG0377 | 631 | consensus Protein serine/threonine phosphatase RDG | 98.74 | |
| KOG0041 | 244 | consensus Predicted Ca2+-binding protein, EF-Hand | 98.7 | |
| PF06176 | 229 | WaaY: Lipopolysaccharide core biosynthesis protein | 98.69 | |
| COG0661 | 517 | AarF Predicted unusual protein kinase [General fun | 98.67 | |
| KOG0036 | 463 | consensus Predicted mitochondrial carrier protein | 98.67 |
| >KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-66 Score=475.23 Aligned_cols=271 Identities=36% Similarity=0.632 Sum_probs=249.2
Q ss_pred ccccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccc----hhhHHHHHHHHHHHHhccCCCCeeEEEEE
Q 042823 17 AYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMR----LAENDMIRREIQIRLYLSGQPNVVEFKST 92 (477)
Q Consensus 17 ~~~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~----~~~~~~~~~e~~~~~~l~~hpniv~~~~~ 92 (477)
..+.+.+.|.+.+.||+|+||.|-+|..+.||+.||||++.+..... .+....+.+|+.++++| +|||||+++++
T Consensus 166 ~pks~~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL-~HP~IV~~~d~ 244 (475)
T KOG0615|consen 166 PPKSFNDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKL-SHPNIVRIKDF 244 (475)
T ss_pred ccchhcceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhc-CCCCEEEEeee
Confidence 44568899999999999999999999999999999999998765433 22345578999999999 79999999999
Q ss_pred EEeCCeEEEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecC
Q 042823 93 YEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFG 172 (477)
Q Consensus 93 ~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg 172 (477)
|+...+.||||||++||+|++.+..++.+.+...+.+++|++.|+.|||++||+||||||+|||+..+.+...+||+|||
T Consensus 245 f~~~ds~YmVlE~v~GGeLfd~vv~nk~l~ed~~K~~f~Qll~avkYLH~~GI~HRDiKPeNILl~~~~e~~llKItDFG 324 (475)
T KOG0615|consen 245 FEVPDSSYMVLEYVEGGELFDKVVANKYLREDLGKLLFKQLLTAVKYLHSQGIIHRDIKPENILLSNDAEDCLLKITDFG 324 (475)
T ss_pred eecCCceEEEEEEecCccHHHHHHhccccccchhHHHHHHHHHHHHHHHHcCcccccCCcceEEeccCCcceEEEecccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999877788999999999
Q ss_pred CccccCCCcceecccccccccchhhhhh----hcCCccchHhHHHHHHHHhhCCCCCCCCChhh-HHHHHHcCCccCCCC
Q 042823 173 SALLFEEGQVYRDIVGSGFYIAPEVLRR----RYGKEIDIWSAGVILYILLSGVPPFWAETKKG-TYDAILQGEIDFDTD 247 (477)
Q Consensus 173 ~a~~~~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~-~~~~i~~~~~~~~~~ 247 (477)
+|+.........+.||||.|.|||++.+ .++.++|+||+||++|-+++|.+||....... ..++|.+|.+.+.+.
T Consensus 325 lAK~~g~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~sl~eQI~~G~y~f~p~ 404 (475)
T KOG0615|consen 325 LAKVSGEGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPSLKEQILKGRYAFGPL 404 (475)
T ss_pred hhhccccceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCccHHHHHhcCcccccCh
Confidence 9999888888899999999999999964 25669999999999999999999998876555 889999999999999
Q ss_pred CCCCCCHHHHHHHHHhcccCccccCCHHHHhcCcccCcCCC
Q 042823 248 PWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGE 288 (477)
Q Consensus 248 ~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~~~ 288 (477)
.|..+|+++++||.+||..||++|||++++|+||||+....
T Consensus 405 ~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~hpW~~~~~~ 445 (475)
T KOG0615|consen 405 QWDRISEEALDLINWMLVVDPENRPSADEALNHPWFKDAPC 445 (475)
T ss_pred hhhhhhHHHHHHHHHhhEeCcccCcCHHHHhcChhhhcccc
Confidence 99999999999999999999999999999999999986643
|
|
| >KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-62 Score=422.87 Aligned_cols=299 Identities=36% Similarity=0.683 Sum_probs=273.1
Q ss_pred cccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCC
Q 042823 18 YEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDET 97 (477)
Q Consensus 18 ~~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~ 97 (477)
...+.+.|++-+.||+|.|++|+++.+..||+.+|+|++..+.. +....+.+.+|++|.+.| .||||+++.+.+.+..
T Consensus 6 ~~~f~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~-~~~~~e~l~rEarIC~~L-qHP~IvrL~~ti~~~~ 83 (355)
T KOG0033|consen 6 STKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKL-SARDFQKLEREARICRKL-QHPNIVRLHDSIQEES 83 (355)
T ss_pred ccccchhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhh-ccccHHHHHHHHHHHHhc-CCCcEeehhhhhcccc
Confidence 34577899999999999999999999999999999999976543 334677899999999998 7999999999999999
Q ss_pred eEEEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCcccc
Q 042823 98 AVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLF 177 (477)
Q Consensus 98 ~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~ 177 (477)
..|+|+|++.|++|..-+.++-.++|..+..+++||++||.|||.+||||||+||+|+++.+.+...-+||+|||+|...
T Consensus 84 ~~ylvFe~m~G~dl~~eIV~R~~ySEa~aSH~~rQiLeal~yCH~n~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l 163 (355)
T KOG0033|consen 84 FHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILEALAYCHSNGIVHRDLKPENLLLASKAKGAAVKLADFGLAIEV 163 (355)
T ss_pred eeEEEEecccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeeeeccCCCceeecccceEEEe
Confidence 99999999999999988888888899999999999999999999999999999999999999888899999999999998
Q ss_pred CCCcceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCCCCHHH
Q 042823 178 EEGQVYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTA 256 (477)
Q Consensus 178 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 256 (477)
..+....+.+|||.|||||+++. +|+..+||||.|||+|.|+.|.+||++.+....++.|.++.+.++.+.|+.+++++
T Consensus 164 ~~g~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~rlye~I~~g~yd~~~~~w~~is~~A 243 (355)
T KOG0033|consen 164 NDGEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYEQIKAGAYDYPSPEWDTVTPEA 243 (355)
T ss_pred CCccccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccHHHHHHHHhccccCCCCcccCcCCHHH
Confidence 87777778899999999999975 79999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcccCccccCCHHHHhcCcccCcCCCC---CCchHHHHHHHHHhhhhHHHHhhhhhhhc
Q 042823 257 KDLVRRMLTKDPKRRITAAQVLEHPWLRESGEA---SDDTSVILRMKQFRRMNKLKKLTIKVIVE 318 (477)
Q Consensus 257 ~~li~~~l~~dp~~R~s~~~~l~h~~~~~~~~~---~~~~~~~~~~~~~~~~~~l~~~~~~~i~~ 318 (477)
++||++||..||.+|+|+.++|+|||+++...- ...+.....+++|...++++..++..+..
T Consensus 244 k~LvrrML~~dP~kRIta~EAL~HpWi~~r~~~As~~H~~dtvd~lrkfNarRKLKgavLtav~s 308 (355)
T KOG0033|consen 244 KSLIRRMLTVNPKKRITADEALKHPWICNRERVASAIHRQDTVDCLKKFNARRKLKGAILTTVIA 308 (355)
T ss_pred HHHHHHHhccChhhhccHHHHhCCchhcchHHHHHHhhhHHHHHHHHHhhHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999876432 23556778889999999999888776654
|
|
| >KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-60 Score=456.46 Aligned_cols=257 Identities=36% Similarity=0.602 Sum_probs=241.9
Q ss_pred ccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 042823 23 LHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVV 102 (477)
Q Consensus 23 ~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~lv 102 (477)
.+|..++.||+|||+.||.+++..+|..||+|++.++........+.+.+||+|+++| .|||||+++++|++.+++|||
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L-~HpnIV~f~~~FEDs~nVYiv 96 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSL-KHPNIVQFYHFFEDSNNVYIV 96 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhc-CCCcEEeeeeEeecCCceEEE
Confidence 5799999999999999999999999999999999987766667788999999999999 799999999999999999999
Q ss_pred EeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCCC-c
Q 042823 103 MELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEG-Q 181 (477)
Q Consensus 103 ~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~-~ 181 (477)
+|+|+.++|..++++.+.++|.+++.+++||+.||.|||+++|+|||||..|+++ +++..|||+|||+|+..... .
T Consensus 97 LELC~~~sL~el~Krrk~ltEpEary~l~QIv~GlkYLH~~~IiHRDLKLGNlfL---~~~~~VKIgDFGLAt~le~~~E 173 (592)
T KOG0575|consen 97 LELCHRGSLMELLKRRKPLTEPEARYFLRQIVEGLKYLHSLGIIHRDLKLGNLFL---NENMNVKIGDFGLATQLEYDGE 173 (592)
T ss_pred EEecCCccHHHHHHhcCCCCcHHHHHHHHHHHHHHHHHHhcCceecccchhheee---cCcCcEEecccceeeeecCccc
Confidence 9999999999999999999999999999999999999999999999999999999 88889999999999988744 5
Q ss_pred ceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCCCCHHHHHHH
Q 042823 182 VYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLV 260 (477)
Q Consensus 182 ~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li 260 (477)
...+.+|||.|.|||++.+ .++..+||||+||++|.||.|+|||...+-.+.+..|....+.+|. .+|.++++||
T Consensus 174 rk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~vkety~~Ik~~~Y~~P~----~ls~~A~dLI 249 (592)
T KOG0575|consen 174 RKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKTVKETYNKIKLNEYSMPS----HLSAEAKDLI 249 (592)
T ss_pred ccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccchHHHHHHHHHhcCccccc----ccCHHHHHHH
Confidence 6678899999999999975 6999999999999999999999999999999999999999988875 6899999999
Q ss_pred HHhcccCccccCCHHHHhcCcccCcCC
Q 042823 261 RRMLTKDPKRRITAAQVLEHPWLRESG 287 (477)
Q Consensus 261 ~~~l~~dp~~R~s~~~~l~h~~~~~~~ 287 (477)
.+||+.||.+|||+.++|.|+||+...
T Consensus 250 ~~lL~~~P~~Rpsl~~vL~h~Ff~~g~ 276 (592)
T KOG0575|consen 250 RKLLRPNPSERPSLDEVLDHPFFKSGF 276 (592)
T ss_pred HHHhcCCcccCCCHHHHhcCHhhhCCC
Confidence 999999999999999999999996543
|
|
| >KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-58 Score=446.47 Aligned_cols=324 Identities=53% Similarity=0.894 Sum_probs=290.4
Q ss_pred ccccccccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEE
Q 042823 13 ILGKAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKST 92 (477)
Q Consensus 13 ~~~~~~~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~ 92 (477)
........+...|.+.+.||.|.||+||+|+++.||+.+|+|++.+...........+.+|+.+++++..|||||.++++
T Consensus 25 ~~~~~~~~~~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~ 104 (382)
T KOG0032|consen 25 ILPPFSEDIKEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDA 104 (382)
T ss_pred ccccccccccccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEE
Confidence 33346678889999999999999999999999999999999999887665555667899999999999779999999999
Q ss_pred EEeCCeEEEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCC-CCCEEEeec
Q 042823 93 YEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDD-NALLKVTDF 171 (477)
Q Consensus 93 ~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~-~~~~kl~Df 171 (477)
|++...+|+|||+|.||+|++.+... .+++..+..+++|++.|+.|||+.||+||||||+|+|+..... .+.+|++||
T Consensus 105 ~e~~~~~~lvmEL~~GGeLfd~i~~~-~~sE~da~~~~~~il~av~~lH~~gvvHrDlKpEN~L~~~~~~~~~~ik~~DF 183 (382)
T KOG0032|consen 105 FEDPDSVYLVMELCEGGELFDRIVKK-HYSERDAAGIIRQILEAVKYLHSLGVVHRDLKPENLLLASKDEGSGRIKLIDF 183 (382)
T ss_pred EEcCCeEEEEEEecCCchHHHHHHHc-cCCHHHHHHHHHHHHHHHHHHHhCCceeccCCHHHeeeccccCCCCcEEEeeC
Confidence 99999999999999999999999887 4999999999999999999999999999999999999977654 468999999
Q ss_pred CCccccCCCcceecccccccccchhhhh-hhcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCC
Q 042823 172 GSALLFEEGQVYRDIVGSGFYIAPEVLR-RRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWP 250 (477)
Q Consensus 172 g~a~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~ 250 (477)
|+|............+|||.|+|||++. ..|+..+||||+|+++|.|++|.+||++.+......++..+.+.+..++|+
T Consensus 184 Gla~~~~~~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~~i~~~~~~f~~~~w~ 263 (382)
T KOG0032|consen 184 GLAKFIKPGERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFLAILRGDFDFTSEPWD 263 (382)
T ss_pred CCceEccCCceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHHHHHcCCCCCCCCCcc
Confidence 9999988877788899999999999998 689999999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHhcccCccccCCHHHHhcCcccCcCCCCC---CchHHHHHHHHHhhhhHHHHhhhhhhhccCCchhhHH
Q 042823 251 SISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEAS---DDTSVILRMKQFRRMNKLKKLTIKVIVEYLPDEETQA 327 (477)
Q Consensus 251 ~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~ 327 (477)
.+|..+++||++||..||..|+|+.++|+|||++...... .......+.+++..++++++..........+ ...
T Consensus 264 ~is~~akd~i~~ll~~dp~~R~ta~~~L~HpWi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~ 340 (382)
T KOG0032|consen 264 DISESAKDFIRKLLEFDPRKRLTAAQALQHPWIKSIGEATNIPLDISVLSRSKQFLSMSKLKKLALRVLAESLS---ISG 340 (382)
T ss_pred ccCHHHHHHHHHhcccCcccCCCHHHHhcCccccCCcccccccccchhhhhHHHHHHHHHHHHHHHHHHhhhhh---HHH
Confidence 9999999999999999999999999999999999764333 3445556677888888888876666655544 777
Q ss_pred HHHHhhhcCCCCC
Q 042823 328 LKEKFIEMDTDKN 340 (477)
Q Consensus 328 l~~~F~~~D~~~~ 340 (477)
++..|..+|.+++
T Consensus 341 ~~~~~~~~~~~~~ 353 (382)
T KOG0032|consen 341 LKEMFKLMDTDNN 353 (382)
T ss_pred HHHHHHhhccccc
Confidence 8888998888877
|
|
| >KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-58 Score=418.62 Aligned_cols=263 Identities=26% Similarity=0.386 Sum_probs=231.6
Q ss_pred cccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCC-e
Q 042823 20 DVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDET-A 98 (477)
Q Consensus 20 ~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~-~ 98 (477)
....+.+.++.||+|..|+||+|+|+.|++.+|+|+|.. ....+...++.+|+++++.. +||+||++|++|..+. .
T Consensus 76 i~~~dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~--~~~~~~~~Qi~rEl~il~~~-~spyIV~~ygaF~~~~~~ 152 (364)
T KOG0581|consen 76 ISLSDLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILL--NIDPALQKQILRELEILRSC-QSPYIVGFYGAFYSNGEE 152 (364)
T ss_pred cCHHHhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeecc--cCCHHHHHHHHHHHHHHhhC-CCCCeeeEeEEEEeCCce
Confidence 334467778999999999999999999999999999943 33456778999999999999 8999999999999999 5
Q ss_pred EEEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH-cCCeeccCCCCceeeeecCCCCCEEEeecCCcccc
Q 042823 99 VHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHS-MGVMHRDLKPENFSFISRDDNALLKVTDFGSALLF 177 (477)
Q Consensus 99 ~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~-~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~ 177 (477)
++|+||||+||||.+++...++++|.....+++++++||.|||. ++||||||||+|||+ +..+.|||||||.+..+
T Consensus 153 isI~mEYMDgGSLd~~~k~~g~i~E~~L~~ia~~VL~GL~YLh~~~~IIHRDIKPsNlLv---NskGeVKicDFGVS~~l 229 (364)
T KOG0581|consen 153 ISICMEYMDGGSLDDILKRVGRIPEPVLGKIARAVLRGLSYLHEERKIIHRDIKPSNLLV---NSKGEVKICDFGVSGIL 229 (364)
T ss_pred EEeehhhcCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhccCeeeccCCHHHeee---ccCCCEEeccccccHHh
Confidence 99999999999999999999999999999999999999999995 999999999999999 88999999999999988
Q ss_pred CCCcceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCC-----ChhhHHHHHHcCCccCCCCCCCC
Q 042823 178 EEGQVYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAE-----TKKGTYDAILQGEIDFDTDPWPS 251 (477)
Q Consensus 178 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~-----~~~~~~~~i~~~~~~~~~~~~~~ 251 (477)
.+. ...+++||..|||||.+.+ .|+.++||||||+.++|+++|+.||... ..-+.+..|..+..+-.+. ..
T Consensus 230 vnS-~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~~Iv~~ppP~lP~--~~ 306 (364)
T KOG0581|consen 230 VNS-IANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELLCAIVDEPPPRLPE--GE 306 (364)
T ss_pred hhh-hcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHHHHHHhcCCCCCCCc--cc
Confidence 665 5678999999999999987 6999999999999999999999999774 3345566666654332221 14
Q ss_pred CCHHHHHHHHHhcccCccccCCHHHHhcCcccCcCCCCCC
Q 042823 252 ISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASD 291 (477)
Q Consensus 252 ~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~~~~~~ 291 (477)
+|+++++||..||++||.+|||+.|+++|||++.......
T Consensus 307 fS~ef~~FV~~CL~Kdp~~R~s~~qLl~Hpfi~~~~~~~v 346 (364)
T KOG0581|consen 307 FSPEFRSFVSCCLRKDPSERPSAKQLLQHPFIKKFEDPNV 346 (364)
T ss_pred CCHHHHHHHHHHhcCCcccCCCHHHHhcCHHHhhcccccc
Confidence 8999999999999999999999999999999997765443
|
|
| >KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.2e-58 Score=417.43 Aligned_cols=259 Identities=33% Similarity=0.592 Sum_probs=238.6
Q ss_pred cccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEE
Q 042823 22 MLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHV 101 (477)
Q Consensus 22 ~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~l 101 (477)
.++|++.+.||+|+||+||.++.+.|++.||+|++.|+......+......|..++..+ +||+||+++..|++...+|+
T Consensus 24 ~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v-~hPFiv~l~ysFQt~~kLyl 102 (357)
T KOG0598|consen 24 PDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKI-KHPFIVKLIYSFQTEEKLYL 102 (357)
T ss_pred hhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhC-CCCcEeeeEEecccCCeEEE
Confidence 56899999999999999999999999999999999887766666788899999999998 79999999999999999999
Q ss_pred EEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCcccc-CCC
Q 042823 102 VMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLF-EEG 180 (477)
Q Consensus 102 v~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~-~~~ 180 (477)
|+||+.||.|+..|.+.+.++|..++.++..|+.||.|||++|||||||||+|||+ +..|+++|+|||+++.. ..+
T Consensus 103 Vld~~~GGeLf~hL~~eg~F~E~~arfYlaEi~lAL~~LH~~gIiyRDlKPENILL---d~~GHi~LtDFgL~k~~~~~~ 179 (357)
T KOG0598|consen 103 VLDYLNGGELFYHLQREGRFSEDRARFYLAEIVLALGYLHSKGIIYRDLKPENILL---DEQGHIKLTDFGLCKEDLKDG 179 (357)
T ss_pred EEeccCCccHHHHHHhcCCcchhHHHHHHHHHHHHHHHHHhCCeeeccCCHHHeee---cCCCcEEEeccccchhcccCC
Confidence 99999999999999999999999999999999999999999999999999999999 89999999999999854 444
Q ss_pred cceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCCCCHHHHHH
Q 042823 181 QVYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDL 259 (477)
Q Consensus 181 ~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l 259 (477)
....+++||+.|||||++.+ .|+..+|.||||+++|+|++|.+||.+.+...++++|.++.....+ ..+|.+++++
T Consensus 180 ~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~~~~~~~I~~~k~~~~p---~~ls~~ardl 256 (357)
T KOG0598|consen 180 DATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDVKKMYDKILKGKLPLPP---GYLSEEARDL 256 (357)
T ss_pred CccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCccHHHHHHHHhcCcCCCCC---ccCCHHHHHH
Confidence 55677899999999999865 7999999999999999999999999999999999999998754433 2379999999
Q ss_pred HHHhcccCccccC----CHHHHhcCcccCcCC
Q 042823 260 VRRMLTKDPKRRI----TAAQVLEHPWLRESG 287 (477)
Q Consensus 260 i~~~l~~dp~~R~----s~~~~l~h~~~~~~~ 287 (477)
++++|+.||++|. ++.++-+||||+...
T Consensus 257 l~~LL~rdp~~RLg~~~d~~~ik~HpfF~~in 288 (357)
T KOG0598|consen 257 LKKLLKRDPRQRLGGPGDAEEIKRHPFFKGIN 288 (357)
T ss_pred HHHHhccCHHHhcCCCCChHHhhcCcccccCC
Confidence 9999999999995 789999999998753
|
|
| >KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-57 Score=416.39 Aligned_cols=265 Identities=34% Similarity=0.568 Sum_probs=238.7
Q ss_pred cccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeE
Q 042823 20 DVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAV 99 (477)
Q Consensus 20 ~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~ 99 (477)
....+|.+.+.||.|+||+||+|+++.++..||||.+.++.. .....+.+..|+.+++.+ +|||||+++++.+.++.+
T Consensus 7 ~~~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l-~~k~~e~L~~Ei~iLkel-~H~nIV~l~d~~~~~~~i 84 (429)
T KOG0595|consen 7 RVVGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKL-NKKLVELLLSEIKILKEL-KHPNIVRLLDCIEDDDFI 84 (429)
T ss_pred cccccceehhhccCcceEEEEEeEeccCCceEEeeeehhhcc-CHHHHHHHHHHHHHHHhc-CCcceeeEEEEEecCCeE
Confidence 456789999999999999999999999999999999987643 455678889999999999 699999999999999999
Q ss_pred EEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCC---CCEEEeecCCccc
Q 042823 100 HVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDN---ALLKVTDFGSALL 176 (477)
Q Consensus 100 ~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~---~~~kl~Dfg~a~~ 176 (477)
|+|||||.||+|.+|+.+.+.++|..++.++.||+.||++||+++||||||||+|||+...... ..+||+|||+|+.
T Consensus 85 ~lVMEyC~gGDLs~yi~~~~~l~e~t~r~Fm~QLA~alq~L~~~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~ 164 (429)
T KOG0595|consen 85 YLVMEYCNGGDLSDYIRRRGRLPEATARHFMQQLASALQFLHENNIIHRDLKPQNILLSTTARNDTSPVLKIADFGFARF 164 (429)
T ss_pred EEEEEeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCcceEEeccCCCCCCCceEEecccchhhh
Confidence 9999999999999999999999999999999999999999999999999999999999664222 7899999999999
Q ss_pred cCCCcceecccccccccchhhhh-hhcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCCCCHH
Q 042823 177 FEEGQVYRDIVGSGFYIAPEVLR-RRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISST 255 (477)
Q Consensus 177 ~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 255 (477)
+.++....+.+|+|.|||||++. ++|+.|+|+||+|+|+|+|++|++||...+..+.+..+.++....+..+ ..+++.
T Consensus 165 L~~~~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~~eL~~~~~k~~~~~~~~~-~~~s~~ 243 (429)
T KOG0595|consen 165 LQPGSMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAETPKELLLYIKKGNEIVPVLP-AELSNP 243 (429)
T ss_pred CCchhHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhccccccCchh-hhccCc
Confidence 99888778899999999999994 7899999999999999999999999999999998887777665443322 346777
Q ss_pred HHHHHHHhcccCccccCCHHHHhcCcccCcCC
Q 042823 256 AKDLVRRMLTKDPKRRITAAQVLEHPWLRESG 287 (477)
Q Consensus 256 ~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~~ 287 (477)
..+++...|+.+|.+|.+..+-+.|+++....
T Consensus 244 ~~~Ll~~ll~~~~~~~~~~~~~~~~~~l~~~p 275 (429)
T KOG0595|consen 244 LRELLISLLQRNPKDRISFEDFFDHPFLAANP 275 (429)
T ss_pred hhhhhhHHHhcCccccCchHHhhhhhhcccCc
Confidence 88999999999999999999999999987654
|
|
| >KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-57 Score=427.34 Aligned_cols=259 Identities=33% Similarity=0.593 Sum_probs=237.3
Q ss_pred cccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEE
Q 042823 22 MLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHV 101 (477)
Q Consensus 22 ~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~l 101 (477)
..+|.+++.||.|+|++|++|+++.+++.||||++.+....+..-..-+.+|-.+|.+|.+||.|+++|-.|++...+|+
T Consensus 72 ~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sLYF 151 (604)
T KOG0592|consen 72 PNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESLYF 151 (604)
T ss_pred hhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccceEE
Confidence 34799999999999999999999999999999999877655555566677888889999899999999999999999999
Q ss_pred EEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCCCc
Q 042823 102 VMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQ 181 (477)
Q Consensus 102 v~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~ 181 (477)
|+||+++|+|+++|++.+.+++..++.++.||+.||+|||++|||||||||+|||+ ++++++||+|||.|+.+.+..
T Consensus 152 vLe~A~nGdll~~i~K~Gsfde~caR~YAAeIldAleylH~~GIIHRDlKPENILL---d~dmhikITDFGsAK~l~~~~ 228 (604)
T KOG0592|consen 152 VLEYAPNGDLLDLIKKYGSFDETCARFYAAEILDALEYLHSNGIIHRDLKPENILL---DKDGHIKITDFGSAKILSPSQ 228 (604)
T ss_pred EEEecCCCcHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeE---cCCCcEEEeeccccccCChhh
Confidence 99999999999999999999999999999999999999999999999999999999 899999999999998764321
Q ss_pred c--------------eecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCC
Q 042823 182 V--------------YRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDT 246 (477)
Q Consensus 182 ~--------------~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~ 246 (477)
. ..+++||..|.+||++.. ..++.+|+|+||||+|+|+.|.+||.+.+...++++|+.-.+.|+.
T Consensus 229 ~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~NeyliFqkI~~l~y~fp~ 308 (604)
T KOG0592|consen 229 KSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANEYLIFQKIQALDYEFPE 308 (604)
T ss_pred ccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccHHHHHHHHHHhcccCCC
Confidence 1 145899999999999975 5789999999999999999999999999999999999998888874
Q ss_pred CCCCCCCHHHHHHHHHhcccCccccCCHHHHhcCcccCcCC
Q 042823 247 DPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESG 287 (477)
Q Consensus 247 ~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~~ 287 (477)
..++.+++||+++|..||.+|+|++||.+||||....
T Consensus 309 ----~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~HpFF~~Vd 345 (604)
T KOG0592|consen 309 ----GFPEDARDLIKKLLVRDPSDRLTSQQIKAHPFFEGVD 345 (604)
T ss_pred ----CCCHHHHHHHHHHHccCccccccHHHHhhCcccccCC
Confidence 6789999999999999999999999999999998654
|
|
| >KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-56 Score=433.71 Aligned_cols=258 Identities=37% Similarity=0.634 Sum_probs=240.5
Q ss_pred cccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEE
Q 042823 22 MLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHV 101 (477)
Q Consensus 22 ~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~l 101 (477)
.+-|.+++.||.|+-|.|-+|+|..||+..|||+|.+...........+++||.+|+.+ .||||+++|++|+++.++|+
T Consensus 11 iGpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi-~HpnVl~LydVwe~~~~lyl 89 (786)
T KOG0588|consen 11 IGPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLI-EHPNVLRLYDVWENKQHLYL 89 (786)
T ss_pred ccceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHh-cCCCeeeeeeeeccCceEEE
Confidence 34689999999999999999999999999999999887555555667799999998877 79999999999999999999
Q ss_pred EEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCCCc
Q 042823 102 VMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQ 181 (477)
Q Consensus 102 v~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~ 181 (477)
|+||++||.|++++..++++++.+++.+++||+.|+.|||..+|+||||||+|+|+ +....|||+|||+|..-.++.
T Consensus 90 vlEyv~gGELFdylv~kG~l~e~eaa~ff~QIi~gv~yCH~~~icHRDLKpENlLL---d~~~nIKIADFGMAsLe~~gk 166 (786)
T KOG0588|consen 90 VLEYVPGGELFDYLVRKGPLPEREAAHFFRQILDGVSYCHAFNICHRDLKPENLLL---DVKNNIKIADFGMASLEVPGK 166 (786)
T ss_pred EEEecCCchhHHHHHhhCCCCCHHHHHHHHHHHHHHHHHhhhcceeccCCchhhhh---hcccCEeeeccceeecccCCc
Confidence 99999999999999999999999999999999999999999999999999999988 677779999999999988888
Q ss_pred ceecccccccccchhhhhhh-c-CCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCCCCHHHHHH
Q 042823 182 VYRDIVGSGFYIAPEVLRRR-Y-GKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDL 259 (477)
Q Consensus 182 ~~~~~~gt~~y~aPE~~~~~-~-~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l 259 (477)
...+.||+|+|+|||++.|. | +.++||||+|||||.||||+.||.+.+....+.++.+|.+.++ ..+|+++++|
T Consensus 167 lLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdNir~LLlKV~~G~f~MP----s~Is~eaQdL 242 (786)
T KOG0588|consen 167 LLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDDNIRVLLLKVQRGVFEMP----SNISSEAQDL 242 (786)
T ss_pred cccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCccHHHHHHHHHcCcccCC----CcCCHHHHHH
Confidence 88999999999999999873 4 7899999999999999999999999999999999999998887 4789999999
Q ss_pred HHHhcccCccccCCHHHHhcCcccCcCC
Q 042823 260 VRRMLTKDPKRRITAAQVLEHPWLRESG 287 (477)
Q Consensus 260 i~~~l~~dp~~R~s~~~~l~h~~~~~~~ 287 (477)
|.+||.+||++|+|.+++++|||+....
T Consensus 243 Lr~ml~VDp~~RiT~~eI~kHP~l~g~~ 270 (786)
T KOG0588|consen 243 LRRMLDVDPSTRITTEEILKHPFLSGYT 270 (786)
T ss_pred HHHHhccCccccccHHHHhhCchhhcCC
Confidence 9999999999999999999999997543
|
|
| >KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-57 Score=397.66 Aligned_cols=257 Identities=28% Similarity=0.502 Sum_probs=225.2
Q ss_pred cccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEE
Q 042823 22 MLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHV 101 (477)
Q Consensus 22 ~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~l 101 (477)
+++|....++|+|+||+||+|+++.||+.||||++..+.. +........+|++++++| .|||+|.++++|.....+++
T Consensus 1 MekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esed-d~~VkKIAlREIrmLKqL-kH~NLVnLiEVFrrkrklhL 78 (396)
T KOG0593|consen 1 MEKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESED-DPVVKKIALREIRMLKQL-KHENLVNLIEVFRRKRKLHL 78 (396)
T ss_pred CcHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCc-cHHHHHHHHHHHHHHHhc-ccchHHHHHHHHHhcceeEE
Confidence 4689999999999999999999999999999999976543 233445567999999999 69999999999999999999
Q ss_pred EEeccCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccC-C
Q 042823 102 VMELCEGGDLFDRIIAK-GYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFE-E 179 (477)
Q Consensus 102 v~e~~~gg~L~~~l~~~-~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~-~ 179 (477)
|+|||+. ++.+.|... ..+++..+.++++|++.|+.|||++++|||||||+|||+ ..++.+||||||+|+.+. +
T Consensus 79 VFE~~dh-TvL~eLe~~p~G~~~~~vk~~l~Q~l~ai~~cHk~n~IHRDIKPENILi---t~~gvvKLCDFGFAR~L~~p 154 (396)
T KOG0593|consen 79 VFEYCDH-TVLHELERYPNGVPSELVKKYLYQLLKAIHFCHKNNCIHRDIKPENILI---TQNGVVKLCDFGFARTLSAP 154 (396)
T ss_pred Eeeecch-HHHHHHHhccCCCCHHHHHHHHHHHHHHhhhhhhcCeecccCChhheEE---ecCCcEEeccchhhHhhcCC
Confidence 9999987 666777664 458899999999999999999999999999999999999 788999999999999887 7
Q ss_pred Ccceecccccccccchhhhhh--hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCcc--------------
Q 042823 180 GQVYRDIVGSGFYIAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEID-------------- 243 (477)
Q Consensus 180 ~~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~-------------- 243 (477)
+..+..++.|.||+|||.+-+ +|++.+||||+||++.||++|.+.|.+.++-+++..|...-..
T Consensus 155 gd~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N~~ 234 (396)
T KOG0593|consen 155 GDNYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSSNPF 234 (396)
T ss_pred cchhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhccCCc
Confidence 777888999999999999976 6999999999999999999999999999988877666542111
Q ss_pred -----CCC--------CCCCCCCHHHHHHHHHhcccCccccCCHHHHhcCcccC
Q 042823 244 -----FDT--------DPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLR 284 (477)
Q Consensus 244 -----~~~--------~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~ 284 (477)
++. ..+|.++..+.+|+++||..||.+|++++|+|.||||.
T Consensus 235 F~Gv~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~H~yFd 288 (396)
T KOG0593|consen 235 FHGVRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLHHPYFD 288 (396)
T ss_pred eeeeecCCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhcChHHH
Confidence 111 12456888999999999999999999999999999994
|
|
| >KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-56 Score=390.84 Aligned_cols=257 Identities=32% Similarity=0.581 Sum_probs=239.6
Q ss_pred ccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEE
Q 042823 21 VMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVH 100 (477)
Q Consensus 21 ~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~ 100 (477)
-.++|++++.||.|+||.|.+++++.+|..+|+|++.+....+....+...+|..+++.+ .||+++++++.|.+.+.+|
T Consensus 42 ~l~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v-~~PFlv~l~~t~~d~~~ly 120 (355)
T KOG0616|consen 42 SLQDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAV-SHPFLVKLYGTFKDNSNLY 120 (355)
T ss_pred chhhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhc-cCceeEEEEEeeccCCeEE
Confidence 446789999999999999999999999999999999887766667778889999999999 6999999999999999999
Q ss_pred EEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCCC
Q 042823 101 VVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEG 180 (477)
Q Consensus 101 lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~ 180 (477)
+||||++||.|+.++++.+++++..++.++.||+.||+|||+++|++|||||+|||+ +.+|.+||+|||+|+.....
T Consensus 121 mvmeyv~GGElFS~Lrk~~rF~e~~arFYAAeivlAleylH~~~iiYRDLKPENiLl---D~~G~iKitDFGFAK~v~~r 197 (355)
T KOG0616|consen 121 MVMEYVPGGELFSYLRKSGRFSEPHARFYAAEIVLALEYLHSLDIIYRDLKPENLLL---DQNGHIKITDFGFAKRVSGR 197 (355)
T ss_pred EEEeccCCccHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHhcCeeeccCChHHeee---ccCCcEEEEeccceEEecCc
Confidence 999999999999999999999999999999999999999999999999999999999 89999999999999987654
Q ss_pred cceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCCCCHHHHHH
Q 042823 181 QVYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDL 259 (477)
Q Consensus 181 ~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l 259 (477)
..+.||||.|+|||++.. +|+.++|.|||||++|||+.|.+||...+...++++|..+...||. ..|+++++|
T Consensus 198 --T~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~~~iY~KI~~~~v~fP~----~fs~~~kdL 271 (355)
T KOG0616|consen 198 --TWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNPIQIYEKILEGKVKFPS----YFSSDAKDL 271 (355)
T ss_pred --EEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCChHHHHHHHHhCcccCCc----ccCHHHHHH
Confidence 577899999999999874 6999999999999999999999999999999999999999999874 679999999
Q ss_pred HHHhcccCccccC-----CHHHHhcCcccCcCC
Q 042823 260 VRRMLTKDPKRRI-----TAAQVLEHPWLRESG 287 (477)
Q Consensus 260 i~~~l~~dp~~R~-----s~~~~l~h~~~~~~~ 287 (477)
|+++|++|-.+|. ...++.+||||+...
T Consensus 272 l~~LL~vD~t~R~gnlknG~~dIk~H~wF~~v~ 304 (355)
T KOG0616|consen 272 LKKLLQVDLTKRFGNLKNGVEDIKNHPWFKGVD 304 (355)
T ss_pred HHHHHhhhhHhhhcCcCCCccccccCccccccc
Confidence 9999999999994 567899999998643
|
|
| >KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-56 Score=391.83 Aligned_cols=266 Identities=35% Similarity=0.663 Sum_probs=245.6
Q ss_pred ccccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccc-----hhhHHHHHHHHHHHHhccCCCCeeEEEE
Q 042823 17 AYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMR-----LAENDMIRREIQIRLYLSGQPNVVEFKS 91 (477)
Q Consensus 17 ~~~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~-----~~~~~~~~~e~~~~~~l~~hpniv~~~~ 91 (477)
....+-..|.-.+.||.|..++|-+|.++.+|+.+|+|++....... ..-.+.-.+|+.|++++.+||+|+++.+
T Consensus 11 aa~~fy~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D 90 (411)
T KOG0599|consen 11 AAKGFYAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQD 90 (411)
T ss_pred hHhhHHhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeee
Confidence 44566778889999999999999999999999999999987543221 1223456689999999999999999999
Q ss_pred EEEeCCeEEEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeec
Q 042823 92 TYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDF 171 (477)
Q Consensus 92 ~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Df 171 (477)
+|+++..+++|+|.|+.|.|+++|...-.++|...+.|++|+++|+.|||.++||||||||+|||+ +++..+||+||
T Consensus 91 ~yes~sF~FlVFdl~prGELFDyLts~VtlSEK~tR~iMrqlfegVeylHa~~IVHRDLKpENILl---ddn~~i~isDF 167 (411)
T KOG0599|consen 91 VYESDAFVFLVFDLMPRGELFDYLTSKVTLSEKETRRIMRQLFEGVEYLHARNIVHRDLKPENILL---DDNMNIKISDF 167 (411)
T ss_pred eccCcchhhhhhhhcccchHHHHhhhheeecHHHHHHHHHHHHHHHHHHHHhhhhhcccChhheee---ccccceEEecc
Confidence 999999999999999999999999999999999999999999999999999999999999999999 88889999999
Q ss_pred CCccccCCCcceecccccccccchhhhh-------hhcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccC
Q 042823 172 GSALLFEEGQVYRDIVGSGFYIAPEVLR-------RRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDF 244 (477)
Q Consensus 172 g~a~~~~~~~~~~~~~gt~~y~aPE~~~-------~~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~ 244 (477)
|+|+.+.++...+..+|||.|+|||.+. ..|+..+|+||+|||+|.|+.|.+||+.....-++..|++|.+.|
T Consensus 168 GFa~~l~~GekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQmlMLR~ImeGkyqF 247 (411)
T KOG0599|consen 168 GFACQLEPGEKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQMLMLRMIMEGKYQF 247 (411)
T ss_pred ceeeccCCchhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHhccccc
Confidence 9999999999999999999999999974 358999999999999999999999999998888999999999999
Q ss_pred CCCCCCCCCHHHHHHHHHhcccCccccCCHHHHhcCcccCc
Q 042823 245 DTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRE 285 (477)
Q Consensus 245 ~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~ 285 (477)
..+.|..+|...++||++||+.||++|.|++++|.||||.+
T Consensus 248 ~speWadis~~~KdLIsrlLqVdp~~Ritake~LaHpff~q 288 (411)
T KOG0599|consen 248 RSPEWADISATVKDLISRLLQVDPTKRITAKEALAHPFFIQ 288 (411)
T ss_pred CCcchhhccccHHHHHHHHHeeCchhcccHHHHhcChHHHH
Confidence 99999999999999999999999999999999999999954
|
|
| >KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-55 Score=423.03 Aligned_cols=260 Identities=40% Similarity=0.692 Sum_probs=235.5
Q ss_pred ccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCcc-c-hhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeC
Q 042823 19 EDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKM-R-LAENDMIRREIQIRLYLSGQPNVVEFKSTYEDE 96 (477)
Q Consensus 19 ~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~-~-~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~ 96 (477)
.....+|.+++.||+|+||.|+.|.+..++..||+|++.++... . ......+.+|+.+++.+..||||+++++++...
T Consensus 13 ~~~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~ 92 (370)
T KOG0583|consen 13 QLSIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATP 92 (370)
T ss_pred ccccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecC
Confidence 46677999999999999999999999999999999987664221 1 123556779999999996699999999999999
Q ss_pred CeEEEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCC-CCEEEeecCCcc
Q 042823 97 TAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDN-ALLKVTDFGSAL 175 (477)
Q Consensus 97 ~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~-~~~kl~Dfg~a~ 175 (477)
..+|+|||||.||+|++++.+.++++|.+++.+++|+++|++|||++||+||||||+||++ +.+ +.+||+|||++.
T Consensus 93 ~~~~ivmEy~~gGdL~~~i~~~g~l~E~~ar~~F~Qlisav~y~H~~gi~HRDLK~ENill---d~~~~~~Kl~DFG~s~ 169 (370)
T KOG0583|consen 93 TKIYIVMEYCSGGDLFDYIVNKGRLKEDEARKYFRQLISAVAYCHSRGIVHRDLKPENILL---DGNEGNLKLSDFGLSA 169 (370)
T ss_pred CeEEEEEEecCCccHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEe---cCCCCCEEEecccccc
Confidence 9999999999999999999999999999999999999999999999999999999999999 666 899999999999
Q ss_pred cc-CCCcceecccccccccchhhhhh-h-c-CCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCC
Q 042823 176 LF-EEGQVYRDIVGSGFYIAPEVLRR-R-Y-GKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPS 251 (477)
Q Consensus 176 ~~-~~~~~~~~~~gt~~y~aPE~~~~-~-~-~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 251 (477)
.. .......+.+|||.|+|||++.+ . | +.++||||+||+||.|++|..||...+...++..|.++.+.++..
T Consensus 170 ~~~~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~~l~~ki~~~~~~~p~~---- 245 (370)
T KOG0583|consen 170 ISPGEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNVPNLYRKIRKGEFKIPSY---- 245 (370)
T ss_pred ccCCCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccHHHHHHHHhcCCccCCCC----
Confidence 88 46667788999999999999976 3 5 689999999999999999999999988888999999988877643
Q ss_pred C-CHHHHHHHHHhcccCccccCCHHHHhcCcccCc
Q 042823 252 I-SSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRE 285 (477)
Q Consensus 252 ~-~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~ 285 (477)
+ |+++++|+.+||..||.+|+|+.+++.||||+.
T Consensus 246 ~~S~~~~~Li~~mL~~~P~~R~t~~~i~~h~w~~~ 280 (370)
T KOG0583|consen 246 LLSPEARSLIEKMLVPDPSTRITLLEILEHPWFQK 280 (370)
T ss_pred cCCHHHHHHHHHHcCCCcccCCCHHHHhhChhhcc
Confidence 3 999999999999999999999999999999997
|
|
| >KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-55 Score=414.88 Aligned_cols=265 Identities=31% Similarity=0.514 Sum_probs=236.7
Q ss_pred ccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCe
Q 042823 19 EDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETA 98 (477)
Q Consensus 19 ~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~ 98 (477)
..=.++|.++++||+|+||.||+|+.+.||..+|+|++.+...........++.|-.+|... ++|.||++|..|++..+
T Consensus 137 r~~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~-ds~~vVKLyYsFQD~~~ 215 (550)
T KOG0605|consen 137 RLSLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEV-DSPWVVKLYYSFQDKEY 215 (550)
T ss_pred cCCcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhc-CCCcEEEEEEEecCCCe
Confidence 33457899999999999999999999999999999999988766666778888999998885 89999999999999999
Q ss_pred EEEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccC
Q 042823 99 VHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFE 178 (477)
Q Consensus 99 ~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~ 178 (477)
+||||||++||++..+|.+.+.+++..++.++.+++.|++.+|+.|+|||||||+|+|+ +..|++||+|||++.-+.
T Consensus 216 LYLiMEylPGGD~mTLL~~~~~L~e~~arfYiaE~vlAI~~iH~~gyIHRDIKPdNlLi---D~~GHiKLSDFGLs~gl~ 292 (550)
T KOG0605|consen 216 LYLIMEYLPGGDMMTLLMRKDTLTEDWARFYIAETVLAIESIHQLGYIHRDIKPDNLLI---DAKGHIKLSDFGLSTGLD 292 (550)
T ss_pred eEEEEEecCCccHHHHHHhcCcCchHHHHHHHHHHHHHHHHHHHcCcccccCChhheee---cCCCCEeeccccccchhh
Confidence 99999999999999999999999999999999999999999999999999999999999 899999999999984321
Q ss_pred C----------------------C--c-----c-------------------eecccccccccchhhhhh-hcCCccchH
Q 042823 179 E----------------------G--Q-----V-------------------YRDIVGSGFYIAPEVLRR-RYGKEIDIW 209 (477)
Q Consensus 179 ~----------------------~--~-----~-------------------~~~~~gt~~y~aPE~~~~-~~~~~~Diw 209 (477)
. . . . ..+.+|||-|+|||++.+ .|+..+|.|
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwW 372 (550)
T KOG0605|consen 293 KKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWW 372 (550)
T ss_pred hhhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccHH
Confidence 0 0 0 0 012479999999999976 599999999
Q ss_pred hHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCCCCHHHHHHHHHhcccCccccCC---HHHHhcCcccCcC
Q 042823 210 SAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRIT---AAQVLEHPWLRES 286 (477)
Q Consensus 210 slG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s---~~~~l~h~~~~~~ 286 (477)
|||||+||||.|.|||.+.++.+++.+|......+..+.-..+++++++||.+||. ||++|.. ++||.+||||+..
T Consensus 373 SLG~ImyEmLvGyPPF~s~tp~~T~rkI~nwr~~l~fP~~~~~s~eA~DLI~rll~-d~~~RLG~~G~~EIK~HPfF~~v 451 (550)
T KOG0605|consen 373 SLGCIMYEMLVGYPPFCSETPQETYRKIVNWRETLKFPEEVDLSDEAKDLITRLLC-DPENRLGSKGAEEIKKHPFFKGV 451 (550)
T ss_pred HHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhhhccCCCcCcccHHHHHHHHHHhc-CHHHhcCcccHHHHhcCCccccC
Confidence 99999999999999999999999999999887555544446789999999999999 9999985 9999999999876
Q ss_pred CC
Q 042823 287 GE 288 (477)
Q Consensus 287 ~~ 288 (477)
..
T Consensus 452 ~W 453 (550)
T KOG0605|consen 452 DW 453 (550)
T ss_pred Cc
Confidence 43
|
|
| >KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-54 Score=406.26 Aligned_cols=263 Identities=31% Similarity=0.464 Sum_probs=229.1
Q ss_pred ccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCC-
Q 042823 19 EDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDET- 97 (477)
Q Consensus 19 ~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~- 97 (477)
-.++++|.++++||.|.||.||+|+.+.+|..||||.++++.. ... .-.-.||++.+++|..|||||++.+++.+..
T Consensus 6 ~~~m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~-s~e-e~~nLREvksL~kln~hpniikL~Evi~d~~~ 83 (538)
T KOG0661|consen 6 VIFMDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFY-SWE-ECMNLREVKSLRKLNPHPNIIKLKEVIRDNDR 83 (538)
T ss_pred hhHHHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhc-cHH-HHHHHHHHHHHHhcCCCCcchhhHHHhhccCc
Confidence 4678999999999999999999999999999999999876532 222 2233589999999966999999999998887
Q ss_pred eEEEEEeccCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccc
Q 042823 98 AVHVVMELCEGGDLFDRIIAK-GYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALL 176 (477)
Q Consensus 98 ~~~lv~e~~~gg~L~~~l~~~-~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~ 176 (477)
.+|+||||++. +|+++++.+ ..+++..++.|++||+.||+|+|.+|+.|||+||+|||+ .....|||+|||+|+.
T Consensus 84 ~L~fVfE~Md~-NLYqLmK~R~r~fse~~irnim~QilqGL~hiHk~GfFHRDlKPENiLi---~~~~~iKiaDFGLARe 159 (538)
T KOG0661|consen 84 ILYFVFEFMDC-NLYQLMKDRNRLFSESDIRNIMYQILQGLAHIHKHGFFHRDLKPENILI---SGNDVIKIADFGLARE 159 (538)
T ss_pred eEeeeHHhhhh-hHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHHhcCcccccCChhheEe---cccceeEecccccccc
Confidence 99999999965 999999875 458999999999999999999999999999999999999 5577899999999999
Q ss_pred cCCCcceecccccccccchhhhh--hhcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCc------------
Q 042823 177 FEEGQVYRDIVGSGFYIAPEVLR--RRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEI------------ 242 (477)
Q Consensus 177 ~~~~~~~~~~~gt~~y~aPE~~~--~~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~------------ 242 (477)
....+.+..++.|.||+|||++. +.|+.+.||||+|||++|+++-++.|.|.++.+++.+|..-..
T Consensus 160 v~SkpPYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~eg~~ 239 (538)
T KOG0661|consen 160 VRSKPPYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDSWPEGYN 239 (538)
T ss_pred cccCCCcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCccccchhHHH
Confidence 98888889999999999999985 4699999999999999999999999999998888877765211
Q ss_pred -------cCCC-------CCCCCCCHHHHHHHHHhcccCccccCCHHHHhcCcccCcCC
Q 042823 243 -------DFDT-------DPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESG 287 (477)
Q Consensus 243 -------~~~~-------~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~~ 287 (477)
.++. ...+.+++++.++|.+||.+||.+||||+|+|+||||....
T Consensus 240 La~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~pffq~~~ 298 (538)
T KOG0661|consen 240 LASAMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQHPFFQVGR 298 (538)
T ss_pred HHHHhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhcCccccccc
Confidence 1111 11345789999999999999999999999999999998654
|
|
| >KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-55 Score=381.62 Aligned_cols=250 Identities=28% Similarity=0.477 Sum_probs=219.9
Q ss_pred cccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEE-EEEeC
Q 042823 18 YEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKS-TYEDE 96 (477)
Q Consensus 18 ~~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~-~~~~~ 96 (477)
...-...|+|.+.||.|+||.||+|.+..+|..+|.|.+.- ...+......+..|+.++++| +|||||++++ .|.++
T Consensus 14 ~~~~l~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f-~~md~k~rq~~v~Ei~lLkQL-~HpNIVqYy~~~f~~~ 91 (375)
T KOG0591|consen 14 PQKTLADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQF-GMMDAKARQDCVKEISLLKQL-NHPNIVQYYAHSFIED 91 (375)
T ss_pred CcccHHHHHHHHHHcCCcchheEEeeeccCcchhhhhhcch-hhccHHHHHHHHHHHHHHHhc-CCchHHHHHHHhhhcc
Confidence 44556789999999999999999999999999999999873 344566778889999999999 7999999998 55544
Q ss_pred C-eEEEEEeccCCCchHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHH--cC--CeeccCCCCceeeeecCCCCCEE
Q 042823 97 T-AVHVVMELCEGGDLFDRIIA----KGYNSERDAATVLRAIVNAVNVCHS--MG--VMHRDLKPENFSFISRDDNALLK 167 (477)
Q Consensus 97 ~-~~~lv~e~~~gg~L~~~l~~----~~~~~~~~~~~i~~qil~~L~~lH~--~~--ivH~dlkp~Nil~~~~~~~~~~k 167 (477)
+ .++||||||.+|+|.+.++. .+.++|..+++++.|+|.||..||+ .. |+||||||.||++ +.++.||
T Consensus 92 ~evlnivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl---~~~gvvK 168 (375)
T KOG0591|consen 92 NEVLNIVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFL---TANGVVK 168 (375)
T ss_pred chhhHHHHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEE---cCCCcee
Confidence 4 49999999999999998864 4679999999999999999999999 44 9999999999999 7889999
Q ss_pred EeecCCccccCCCcc-eecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCC
Q 042823 168 VTDFGSALLFEEGQV-YRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFD 245 (477)
Q Consensus 168 l~Dfg~a~~~~~~~~-~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~ 245 (477)
|+|||+++.++.... ..+.+|||+||+||.+.+ +|+.++||||+||++|||+.-++||++.+-.+...+|.++.++.-
T Consensus 169 LGDfGL~r~l~s~~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~n~~~L~~KI~qgd~~~~ 248 (375)
T KOG0591|consen 169 LGDFGLGRFLSSKTTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGDNLLSLCKKIEQGDYPPL 248 (375)
T ss_pred eccchhHhHhcchhHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccccHHHHHHHHHcCCCCCC
Confidence 999999998876554 356899999999999975 799999999999999999999999999998888999999865421
Q ss_pred CCCCCCCCHHHHHHHHHhcccCccccCCH
Q 042823 246 TDPWPSISSTAKDLVRRMLTKDPKRRITA 274 (477)
Q Consensus 246 ~~~~~~~~~~~~~li~~~l~~dp~~R~s~ 274 (477)
+-..+|.++..+|..|+.+||+.||+.
T Consensus 249 --p~~~YS~~l~~li~~ci~vd~~~RP~t 275 (375)
T KOG0591|consen 249 --PDEHYSTDLRELINMCIAVDPEQRPDT 275 (375)
T ss_pred --cHHHhhhHHHHHHHHHccCCcccCCCc
Confidence 113589999999999999999999987
|
|
| >KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-54 Score=378.56 Aligned_cols=265 Identities=37% Similarity=0.663 Sum_probs=239.5
Q ss_pred cccccccccccc-ccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEe
Q 042823 17 AYEDVMLHYFFG-RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYED 95 (477)
Q Consensus 17 ~~~~~~~~Y~~~-~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~ 95 (477)
+...+.++|++. ++||-|-.|.|..|.++.||+++|+|++... ...++|+...-....|||||.++++|++
T Consensus 55 k~~~itedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds--------~KARrEVeLHw~~s~h~~iV~IidVyeN 126 (400)
T KOG0604|consen 55 KEYSITEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDS--------PKARREVELHWMASGHPHIVSIIDVYEN 126 (400)
T ss_pred hcccchhhheehhhhhccccCCceEEEEeccchhhhHHHHHhcC--------HHHHhHhhhhhhhcCCCceEEeehhhhh
Confidence 445688899884 7899999999999999999999999987533 3356788888777899999999999864
Q ss_pred ----CCeEEEEEeccCCCchHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEe
Q 042823 96 ----ETAVHVVMELCEGGDLFDRIIAKGY--NSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVT 169 (477)
Q Consensus 96 ----~~~~~lv~e~~~gg~L~~~l~~~~~--~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~ 169 (477)
...+.+|||.++||.|+..+..++. ++|.++..|++||+.|+.|||+.+|.||||||+|+|+.....+..+||+
T Consensus 127 s~~~rkcLLiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~nIAHRDlKpENLLyt~t~~na~lKLt 206 (400)
T KOG0604|consen 127 SYQGRKCLLIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSMNIAHRDLKPENLLYTTTSPNAPLKLT 206 (400)
T ss_pred hccCceeeEeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhcchhhccCChhheeeecCCCCcceEec
Confidence 4578999999999999999998765 9999999999999999999999999999999999999998999999999
Q ss_pred ecCCccccCCCcceecccccccccchhhhh-hhcCCccchHhHHHHHHHHhhCCCCCCCCC----hhhHHHHHHcCCccC
Q 042823 170 DFGSALLFEEGQVYRDIVGSGFYIAPEVLR-RRYGKEIDIWSAGVILYILLSGVPPFWAET----KKGTYDAILQGEIDF 244 (477)
Q Consensus 170 Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~l~tg~~pf~~~~----~~~~~~~i~~~~~~~ 244 (477)
|||+|+....+....+.+-||+|.|||++. .+|+..+|+||+|||+|.|++|.+||+... ...+...|..+.+.|
T Consensus 207 DfGFAK~t~~~~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~aispgMk~rI~~gqy~F 286 (400)
T KOG0604|consen 207 DFGFAKETQEPGDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKRRIRTGQYEF 286 (400)
T ss_pred ccccccccCCCccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCccCChhHHhHhhccCccC
Confidence 999999877666677888999999999996 579999999999999999999999998764 456788999999999
Q ss_pred CCCCCCCCCHHHHHHHHHhcccCccccCCHHHHhcCcccCcCCCC
Q 042823 245 DTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEA 289 (477)
Q Consensus 245 ~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~~~~ 289 (477)
+.+.|..+|+.++++|+++|..+|++|.|+.++++|||+.+...-
T Consensus 287 P~pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~hpwi~~~~~v 331 (400)
T KOG0604|consen 287 PEPEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMDHPWINQYEAV 331 (400)
T ss_pred CChhHhHHHHHHHHHHHHHhcCCchhheeHHHhhcCchhcccccC
Confidence 999999999999999999999999999999999999999876543
|
|
| >KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.7e-53 Score=366.04 Aligned_cols=260 Identities=32% Similarity=0.486 Sum_probs=225.9
Q ss_pred ccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 042823 23 LHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVV 102 (477)
Q Consensus 23 ~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~lv 102 (477)
++|...++||+|.||+||+|++..||+.||||+|........ ......+||+.++.+ +||||+.++++|-....+.||
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdG-i~~talREIK~Lqel-~h~nIi~LiD~F~~~~~l~lV 79 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDG-INRTALREIKLLQEL-KHPNIIELIDVFPHKSNLSLV 79 (318)
T ss_pred chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccC-ccHHHHHHHHHHHHc-cCcchhhhhhhccCCCceEEE
Confidence 589999999999999999999999999999999986643322 234567899999999 699999999999999999999
Q ss_pred EeccCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCCCc
Q 042823 103 MELCEGGDLFDRIIAK-GYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQ 181 (477)
Q Consensus 103 ~e~~~gg~L~~~l~~~-~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~ 181 (477)
+||++. +|...++.. -.++..+++.++.++++||+|||++.|+||||||+|+|+ ++++.+||+|||+|+.+....
T Consensus 80 fEfm~t-dLe~vIkd~~i~l~pa~iK~y~~m~LkGl~y~H~~~IlHRDlKPnNLLi---s~~g~lKiADFGLAr~f~~p~ 155 (318)
T KOG0659|consen 80 FEFMPT-DLEVVIKDKNIILSPADIKSYMLMTLKGLAYCHSKWILHRDLKPNNLLI---SSDGQLKIADFGLARFFGSPN 155 (318)
T ss_pred EEeccc-cHHHHhcccccccCHHHHHHHHHHHHHHHHHHHhhhhhcccCCccceEE---cCCCcEEeecccchhccCCCC
Confidence 999976 998888765 468999999999999999999999999999999999999 889999999999999876443
Q ss_pred -ceecccccccccchhhhhh--hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCC---------
Q 042823 182 -VYRDIVGSGFYIAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPW--------- 249 (477)
Q Consensus 182 -~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~--------- 249 (477)
.....+-|.+|+|||.+-| .|+..+||||+|||+.||+-|.|-|.+.++-+++..|.+.-....+..|
T Consensus 156 ~~~~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~LGTP~~~~WP~~~~lpdY 235 (318)
T KOG0659|consen 156 RIQTHQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRALGTPTPDQWPEMTSLPDY 235 (318)
T ss_pred cccccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHcCCCCcccCccccccccH
Confidence 3333478999999999865 6999999999999999999999999999999888888764333333333
Q ss_pred ---------------CCCCHHHHHHHHHhcccCccccCCHHHHhcCcccCcCCC
Q 042823 250 ---------------PSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGE 288 (477)
Q Consensus 250 ---------------~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~~~ 288 (477)
+..++++.+|+.+||..||.+|+|+.|+|+|+||+....
T Consensus 236 ~~~~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~~yf~~~P~ 289 (318)
T KOG0659|consen 236 VKIQQFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALKHPYFKSLPL 289 (318)
T ss_pred HHHhcCCCCccccccccccHHHHHHHHhhhccCchhcccHHHHhcchhhhcCCC
Confidence 346788999999999999999999999999999997543
|
|
| >KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-53 Score=404.30 Aligned_cols=255 Identities=32% Similarity=0.539 Sum_probs=233.3
Q ss_pred cccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEE
Q 042823 22 MLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHV 101 (477)
Q Consensus 22 ~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~l 101 (477)
+++|.+.+.||+|+||.||+|+.+.+.+.||+|.+.|... ...+...+.+|++|++.+ +|||||.++++|++..++++
T Consensus 1 me~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr-~~k~l~~l~~ev~i~r~l-kHpniv~m~esfEt~~~~~v 78 (808)
T KOG0597|consen 1 MEQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGR-NEKELKNLRQEVRILRSL-KHPNIVEMLESFETSAHLWV 78 (808)
T ss_pred CcchhHHHHhcCCccceeeecccccceeEEEEEEehhcCC-chHHHHHHHHHHHHHHhc-CCcchhhHHHhhcccceEEE
Confidence 4689999999999999999999999999999999987643 345678899999999999 79999999999999999999
Q ss_pred EEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCCCc
Q 042823 102 VMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQ 181 (477)
Q Consensus 102 v~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~ 181 (477)
|.|||.| +|..++...+.++|+.+..+..++++||.|||+++|+|||+||.|||+ +..+.+|+||||+|+....+.
T Consensus 79 Vte~a~g-~L~~il~~d~~lpEe~v~~~a~~LVsaL~yLhs~rilhrd~kPqniLl---~~~~~~KlcdFg~Ar~m~~~t 154 (808)
T KOG0597|consen 79 VTEYAVG-DLFTILEQDGKLPEEQVRAIAYDLVSALYYLHSNRILHRDMKPQNILL---EKGGTLKLCDFGLARAMSTNT 154 (808)
T ss_pred Eehhhhh-hHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcCcccccCCcceeee---cCCCceeechhhhhhhcccCc
Confidence 9999987 999999999999999999999999999999999999999999999999 899999999999998876544
Q ss_pred -ceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCCCCHHHHHH
Q 042823 182 -VYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDL 259 (477)
Q Consensus 182 -~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l 259 (477)
......|||.|||||...+ .|+..+|+||||||+|||++|+|||+..+-.+....|......++ +..|..++.|
T Consensus 155 ~vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~si~~Lv~~I~~d~v~~p----~~~S~~f~nf 230 (808)
T KOG0597|consen 155 SVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYARSITQLVKSILKDPVKPP----STASSSFVNF 230 (808)
T ss_pred eeeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHHHHHHHHHHHhcCCCCCc----ccccHHHHHH
Confidence 4466789999999999975 699999999999999999999999999888888888887655544 4789999999
Q ss_pred HHHhcccCccccCCHHHHhcCcccCcC
Q 042823 260 VRRMLTKDPKRRITAAQVLEHPWLRES 286 (477)
Q Consensus 260 i~~~l~~dp~~R~s~~~~l~h~~~~~~ 286 (477)
+..+|.+||.+|.|..+++.|||.+..
T Consensus 231 l~gLL~kdP~~RltW~~Ll~HpF~k~~ 257 (808)
T KOG0597|consen 231 LQGLLIKDPAQRLTWTDLLGHPFWKGK 257 (808)
T ss_pred HHHHhhcChhhcccHHHHhcChHHhhh
Confidence 999999999999999999999998754
|
|
| >KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-53 Score=386.23 Aligned_cols=261 Identities=35% Similarity=0.580 Sum_probs=245.1
Q ss_pred cccccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEe
Q 042823 16 KAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYED 95 (477)
Q Consensus 16 ~~~~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~ 95 (477)
++...+..+|.+.+.||+|.||.|-+|++...|+.||||.|.+......+..-.+++||.|+..| +||||+.+|++|++
T Consensus 46 hhkhnlkHRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsL-NHPhII~IyEVFEN 124 (668)
T KOG0611|consen 46 HHKHNLKHRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSL-NHPHIIQIYEVFEN 124 (668)
T ss_pred CcccchhhHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhc-CCCceeehhhhhcC
Confidence 45667888999999999999999999999999999999999988877778888999999999999 89999999999999
Q ss_pred CCeEEEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCcc
Q 042823 96 ETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSAL 175 (477)
Q Consensus 96 ~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~ 175 (477)
.+.+.|||||.+||.|++|+...+.++|.+++.+++||.+|+.|||+++++|||||.+|||+ +.++.+||+|||++-
T Consensus 125 kdKIvivMEYaS~GeLYDYiSer~~LsErEaRhfFRQIvSAVhYCHknrVvHRDLKLENILL---D~N~NiKIADFGLSN 201 (668)
T KOG0611|consen 125 KDKIVIVMEYASGGELYDYISERGSLSEREARHFFRQIVSAVHYCHKNRVVHRDLKLENILL---DQNNNIKIADFGLSN 201 (668)
T ss_pred CceEEEEEEecCCccHHHHHHHhccccHHHHHHHHHHHHHHHHHHhhccceecccchhheee---cCCCCeeeeccchhh
Confidence 99999999999999999999999999999999999999999999999999999999999999 889999999999999
Q ss_pred ccCCCcceecccccccccchhhhhhh-c-CCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCCCC
Q 042823 176 LFEEGQVYRDIVGSGFYIAPEVLRRR-Y-GKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSIS 253 (477)
Q Consensus 176 ~~~~~~~~~~~~gt~~y~aPE~~~~~-~-~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 253 (477)
.+.......++||+|.|.+||++.|. | ++.+|-|||||+||.|..|..||.+..-..+..+|.+|.+..+ .-+
T Consensus 202 ly~~~kfLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk~lvrQIs~GaYrEP-----~~P 276 (668)
T KOG0611|consen 202 LYADKKFLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDHKRLVRQISRGAYREP-----ETP 276 (668)
T ss_pred hhccccHHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchHHHHHHHhhcccccCC-----CCC
Confidence 99888888999999999999999874 4 7899999999999999999999999999999999999987654 346
Q ss_pred HHHHHHHHHhcccCccccCCHHHHhcCcccCc
Q 042823 254 STAKDLVRRMLTKDPKRRITAAQVLEHPWLRE 285 (477)
Q Consensus 254 ~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~ 285 (477)
..+.-||+.||.+||++|.|+.++-.|=|+.-
T Consensus 277 SdA~gLIRwmLmVNP~RRATieDiAsHWWvNw 308 (668)
T KOG0611|consen 277 SDASGLIRWMLMVNPERRATIEDIASHWWVNW 308 (668)
T ss_pred chHHHHHHHHHhcCcccchhHHHHhhhheeec
Confidence 78899999999999999999999999988763
|
|
| >KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-52 Score=381.36 Aligned_cols=272 Identities=29% Similarity=0.434 Sum_probs=231.8
Q ss_pred CccccccccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEE
Q 042823 12 PILGKAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKS 91 (477)
Q Consensus 12 ~~~~~~~~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~ 91 (477)
..++.....+..+|...++||+|+||.|+.|.++.+|..||+|++.. +........+..+|+++++.+ +|+||+.+.+
T Consensus 11 ~~~~~~~~~i~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~-~F~~~~~akRtlRElklLr~~-~HeNIi~l~d 88 (359)
T KOG0660|consen 11 YEVFGELFEIPRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILN-PFENQIDAKRTLRELKLLRHL-RHENIIGLLD 88 (359)
T ss_pred EEeeeeEEeccceecccccccCcceeeEEEEEEcCCCCEeehhhhhh-hhhchHHHHHHHHHHHHHHHh-cCCCcceEEe
Confidence 34556777888899999999999999999999999999999999863 344456678889999999999 5999999999
Q ss_pred EEEe-----CCeEEEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCE
Q 042823 92 TYED-----ETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALL 166 (477)
Q Consensus 92 ~~~~-----~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~ 166 (477)
++.. -+.+|+|+|++ +.+|.+.++.+..+++..+..+++||+.||.|+|+.||+||||||.|+++ +.++.+
T Consensus 89 i~~p~~~~~f~DvYiV~elM-etDL~~iik~~~~L~d~H~q~f~YQiLrgLKyiHSAnViHRDLKPsNll~---n~~c~l 164 (359)
T KOG0660|consen 89 IFRPPSRDKFNDVYLVFELM-ETDLHQIIKSQQDLTDDHAQYFLYQILRGLKYIHSANVIHRDLKPSNLLL---NADCDL 164 (359)
T ss_pred ecccccccccceeEEehhHH-hhHHHHHHHcCccccHHHHHHHHHHHHHhcchhhcccccccccchhheee---ccCCCE
Confidence 9865 45699999999 45999999888889999999999999999999999999999999999999 888999
Q ss_pred EEeecCCccccCC---Ccceecccccccccchhhhh--hhcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcC-
Q 042823 167 KVTDFGSALLFEE---GQVYRDIVGSGFYIAPEVLR--RRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQG- 240 (477)
Q Consensus 167 kl~Dfg~a~~~~~---~~~~~~~~gt~~y~aPE~~~--~~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~- 240 (477)
||||||+|+.... ....+..+.|.+|+|||++. ..|+.++||||+|||+.||++|++.|.+...-.++..|+.-
T Consensus 165 KI~DFGLAR~~~~~~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~l 244 (359)
T KOG0660|consen 165 KICDFGLARYLDKFFEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELL 244 (359)
T ss_pred EeccccceeeccccCcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhc
Confidence 9999999998754 33446788999999999985 46999999999999999999999999887755555444331
Q ss_pred ----------------------CccCCCC----CCCCCCHHHHHHHHHhcccCccccCCHHHHhcCcccCcCCCC
Q 042823 241 ----------------------EIDFDTD----PWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEA 289 (477)
Q Consensus 241 ----------------------~~~~~~~----~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~~~~ 289 (477)
....+.. .+|..++.+.+|+.+||..||.+|+|++|+|+|||+......
T Consensus 245 GtP~~e~l~~i~s~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~hPYl~~~hdp 319 (359)
T KOG0660|consen 245 GTPSEEDLQKIRSEKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALAHPYLAPYHDP 319 (359)
T ss_pred CCCCHHHHHHhccHHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhcChhhhhhcCC
Confidence 1111221 246789999999999999999999999999999999865443
|
|
| >KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-52 Score=400.89 Aligned_cols=260 Identities=30% Similarity=0.508 Sum_probs=227.0
Q ss_pred ccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCe
Q 042823 19 EDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETA 98 (477)
Q Consensus 19 ~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~ 98 (477)
.+....|....+||+|+.|.||.|....+++.||||.+..... ...+.+.+|+.+++.. .|||||++++.|-..+.
T Consensus 269 ~dP~~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q---~~keLilnEi~Vm~~~-~H~NiVnfl~Sylv~de 344 (550)
T KOG0578|consen 269 GDPRSKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQ---PKKELLLNEILVMRDL-HHPNIVNFLDSYLVGDE 344 (550)
T ss_pred CChhhhhcchhhhccccccceeeeeeccCCceEEEEEEEeccC---CchhhhHHHHHHHHhc-cchHHHHHHHHhcccce
Confidence 4667789999999999999999999999999999999976543 2346788999999999 79999999999998999
Q ss_pred EEEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccC
Q 042823 99 VHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFE 178 (477)
Q Consensus 99 ~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~ 178 (477)
+++||||++||+|.+.+... .++|.+++.+++.+|.||+|||.+||+|||||.+|||+ ..++.+||+|||++..+.
T Consensus 345 LWVVMEym~ggsLTDvVt~~-~~~E~qIA~Icre~l~aL~fLH~~gIiHrDIKSDnILL---~~~g~vKltDFGFcaqi~ 420 (550)
T KOG0578|consen 345 LWVVMEYMEGGSLTDVVTKT-RMTEGQIAAICREILQGLKFLHARGIIHRDIKSDNILL---TMDGSVKLTDFGFCAQIS 420 (550)
T ss_pred eEEEEeecCCCchhhhhhcc-cccHHHHHHHHHHHHHHHHHHHhcceeeeccccceeEe---ccCCcEEEeeeeeeeccc
Confidence 99999999999998877655 48999999999999999999999999999999999999 778889999999988876
Q ss_pred CCc-ceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHc-CCccCCCCCCCCCCHH
Q 042823 179 EGQ-VYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQ-GEIDFDTDPWPSISST 255 (477)
Q Consensus 179 ~~~-~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~-~~~~~~~~~~~~~~~~ 255 (477)
... ...+.+|||+|||||+... .|++++||||||++++||+-|.+||...++-..+..|.. +...+. .+..+|+.
T Consensus 421 ~~~~KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~PlrAlyLIa~ng~P~lk--~~~klS~~ 498 (550)
T KOG0578|consen 421 EEQSKRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPKLK--NPEKLSPE 498 (550)
T ss_pred cccCccccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCChHHHHHHHhhcCCCCcC--CccccCHH
Confidence 554 4467899999999999975 799999999999999999999999987666555555543 333333 34689999
Q ss_pred HHHHHHHhcccCccccCCHHHHhcCcccCcCCC
Q 042823 256 AKDLVRRMLTKDPKRRITAAQVLEHPWLRESGE 288 (477)
Q Consensus 256 ~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~~~ 288 (477)
+++|+.+||+.||++|++|.++|+||||+....
T Consensus 499 ~kdFL~~cL~~dv~~RasA~eLL~HpFl~~a~p 531 (550)
T KOG0578|consen 499 LKDFLDRCLVVDVEQRASAKELLEHPFLKMAKP 531 (550)
T ss_pred HHHHHHHHhhcchhcCCCHHHHhcChhhhhcCC
Confidence 999999999999999999999999999965443
|
|
| >KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-52 Score=388.21 Aligned_cols=258 Identities=32% Similarity=0.519 Sum_probs=216.3
Q ss_pred cccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCC--eE
Q 042823 22 MLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDET--AV 99 (477)
Q Consensus 22 ~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~--~~ 99 (477)
..+|..++.||+|+||.||++.++.+|...|+|.+..... ...+.+.+|++++.++. |||||++++...... .+
T Consensus 16 ~~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~---~~~~~l~~Ei~iL~~l~-~p~IV~~~G~~~~~~~~~~ 91 (313)
T KOG0198|consen 16 ISNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDS---PTSESLEREIRILSRLN-HPNIVQYYGSSSSRENDEY 91 (313)
T ss_pred cchhhhhccccCccceEEEEEEecCCCcceeeeeeecccc---hhHHHHHHHHHHHHhCC-CCCEEeeCCccccccCeee
Confidence 4568999999999999999999999999999999876521 22677899999999995 999999999854444 69
Q ss_pred EEEEeccCCCchHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCC-CCCEEEeecCCcccc
Q 042823 100 HVVMELCEGGDLFDRIIAKG-YNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDD-NALLKVTDFGSALLF 177 (477)
Q Consensus 100 ~lv~e~~~gg~L~~~l~~~~-~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~-~~~~kl~Dfg~a~~~ 177 (477)
+|.|||++||+|.+++.+.+ .+++..++.+.+||++||.|||++|||||||||+|||+ .. ++.+||+|||++...
T Consensus 92 ~i~mEy~~~GsL~~~~~~~g~~l~E~~v~~ytr~iL~GL~ylHs~g~vH~DiK~~NiLl---~~~~~~~KlaDFG~a~~~ 168 (313)
T KOG0198|consen 92 NIFMEYAPGGSLSDLIKRYGGKLPEPLVRRYTRQILEGLAYLHSKGIVHCDIKPANILL---DPSNGDVKLADFGLAKKL 168 (313)
T ss_pred EeeeeccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccCcccceEEE---eCCCCeEEeccCcccccc
Confidence 99999999999999999877 79999999999999999999999999999999999999 55 689999999999876
Q ss_pred CC----Ccceecccccccccchhhhhhhc--CCccchHhHHHHHHHHhhCCCCCCCC-ChhhHHHHHHcCCccCCCCCCC
Q 042823 178 EE----GQVYRDIVGSGFYIAPEVLRRRY--GKEIDIWSAGVILYILLSGVPPFWAE-TKKGTYDAILQGEIDFDTDPWP 250 (477)
Q Consensus 178 ~~----~~~~~~~~gt~~y~aPE~~~~~~--~~~~DiwslG~il~~l~tg~~pf~~~-~~~~~~~~i~~~~~~~~~~~~~ 250 (477)
.. ........|||.|||||++...+ .+++|||||||++.||+||++||... ........+.... . .+...+
T Consensus 169 ~~~~~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~~~~~~~~~ig~~~-~-~P~ip~ 246 (313)
T KOG0198|consen 169 ESKGTKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEFFEEAEALLLIGRED-S-LPEIPD 246 (313)
T ss_pred ccccccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhhcchHHHHHHHhccC-C-CCCCCc
Confidence 53 12234578999999999998543 34999999999999999999999762 3333333333333 1 113335
Q ss_pred CCCHHHHHHHHHhcccCccccCCHHHHhcCcccCcCCC
Q 042823 251 SISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGE 288 (477)
Q Consensus 251 ~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~~~ 288 (477)
.+|+++++||.+|+.++|++||||.++|+|||.+....
T Consensus 247 ~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hpf~~~~~~ 284 (313)
T KOG0198|consen 247 SLSDEAKDFLRKCFKRDPEKRPTAEELLEHPFLKQNSI 284 (313)
T ss_pred ccCHHHHHHHHHHhhcCcccCcCHHHHhhChhhhcccc
Confidence 68999999999999999999999999999999987544
|
|
| >KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-52 Score=391.49 Aligned_cols=260 Identities=27% Similarity=0.442 Sum_probs=226.6
Q ss_pred ccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeC--Ce
Q 042823 21 VMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDE--TA 98 (477)
Q Consensus 21 ~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~--~~ 98 (477)
-.+.|+.+++||+|.||.||+|++..||+.||+|++...... ........+||.|+++| +||||+++.+...+. ..
T Consensus 115 ~~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~-~~~~~t~~REI~ILr~l-~HpNIikL~eivt~~~~~s 192 (560)
T KOG0600|consen 115 RADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEK-EGFPITAIREIKILRRL-DHPNIIKLEEIVTSKLSGS 192 (560)
T ss_pred chHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCC-CcchHHHHHHHHHHHhc-CCCcccceeeEEEecCCce
Confidence 456789999999999999999999999999999999865432 23455677999999999 899999999999876 78
Q ss_pred EEEEEeccCCCchHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCcccc
Q 042823 99 VHVVMELCEGGDLFDRIIAKG-YNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLF 177 (477)
Q Consensus 99 ~~lv~e~~~gg~L~~~l~~~~-~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~ 177 (477)
+|+|+||++. +|.-++...+ .|++.+++.++.||+.||+|||++||+|||||.+|||+ +.++.+||+|||+|..+
T Consensus 193 iYlVFeYMdh-DL~GLl~~p~vkft~~qIKc~mkQLl~Gl~~cH~~gvlHRDIK~SNiLi---dn~G~LKiaDFGLAr~y 268 (560)
T KOG0600|consen 193 IYLVFEYMDH-DLSGLLSSPGVKFTEPQIKCYMKQLLEGLEYCHSRGVLHRDIKGSNILI---DNNGVLKIADFGLARFY 268 (560)
T ss_pred EEEEEecccc-hhhhhhcCCCcccChHHHHHHHHHHHHHHHHHhhcCeeeccccccceEE---cCCCCEEeccccceeec
Confidence 9999999987 8877776643 69999999999999999999999999999999999999 89999999999999977
Q ss_pred CCCc--ceecccccccccchhhhhh--hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCC---
Q 042823 178 EEGQ--VYRDIVGSGFYIAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWP--- 250 (477)
Q Consensus 178 ~~~~--~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~--- 250 (477)
.... .+...+-|.||+|||.+.| .|+.++|+||+|||+.||++|++.|.+.++-+++..|.+-.-......|+
T Consensus 269 ~~~~~~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e~~W~~~k 348 (560)
T KOG0600|consen 269 TPSGSAPYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTEDYWPVSK 348 (560)
T ss_pred cCCCCcccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCChhcccccc
Confidence 5443 4567788999999999976 59999999999999999999999999999999998887644333333332
Q ss_pred ----------------------CCCHHHHHHHHHhcccCccccCCHHHHhcCcccCcC
Q 042823 251 ----------------------SISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRES 286 (477)
Q Consensus 251 ----------------------~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~ 286 (477)
.++..+.+|+..||..||.+|.||.++|+|+||...
T Consensus 349 LP~~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~seyF~t~ 406 (560)
T KOG0600|consen 349 LPHATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQSEYFTTE 406 (560)
T ss_pred CCcccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhcCcccccC
Confidence 257889999999999999999999999999999543
|
|
| >KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-51 Score=367.76 Aligned_cols=264 Identities=28% Similarity=0.400 Sum_probs=224.6
Q ss_pred ccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEE--eC
Q 042823 19 EDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYE--DE 96 (477)
Q Consensus 19 ~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~--~~ 96 (477)
..-.+.|+.+..|++|+||+||+|+++.|+..||+|+++.......- --...+||.++.+. +|||||.+.++.. +-
T Consensus 72 Crsv~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GF-PItsLREIniLl~~-~H~NIV~vkEVVvG~~~ 149 (419)
T KOG0663|consen 72 CRSVEEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGF-PITSLREINILLKA-RHPNIVEVKEVVVGSNM 149 (419)
T ss_pred cccHHHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCC-cchhHHHHHHHHhc-CCCCeeeeEEEEecccc
Confidence 44556799999999999999999999999999999999765432222 23456899999999 6999999999886 34
Q ss_pred CeEEEEEeccCCCchHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCcc
Q 042823 97 TAVHVVMELCEGGDLFDRIIAKG-YNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSAL 175 (477)
Q Consensus 97 ~~~~lv~e~~~gg~L~~~l~~~~-~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~ 175 (477)
+.+|||||||+. +|...+...+ +++..+++.++.|+++|++|||.+.|+||||||+|+|+ ...|.+||+|||+|+
T Consensus 150 d~iy~VMe~~Eh-DLksl~d~m~q~F~~~evK~L~~QlL~glk~lH~~wilHRDLK~SNLLm---~~~G~lKiaDFGLAR 225 (419)
T KOG0663|consen 150 DKIYIVMEYVEH-DLKSLMETMKQPFLPGEVKTLMLQLLRGLKHLHDNWILHRDLKTSNLLL---SHKGILKIADFGLAR 225 (419)
T ss_pred ceeeeeHHHHHh-hHHHHHHhccCCCchHHHHHHHHHHHHHHHHHhhceeEecccchhheee---ccCCcEEecccchhh
Confidence 579999999987 9998888755 89999999999999999999999999999999999999 788999999999999
Q ss_pred ccCCC-cceecccccccccchhhhhh--hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCC--
Q 042823 176 LFEEG-QVYRDIVGSGFYIAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWP-- 250 (477)
Q Consensus 176 ~~~~~-~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~-- 250 (477)
.+... ......+-|.+|+|||.+.+ .|+.++||||+|||+.||++++|.|.+.+...++..|.+--.......||
T Consensus 226 ~ygsp~k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llGtPte~iwpg~ 305 (419)
T KOG0663|consen 226 EYGSPLKPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLGTPSEAIWPGY 305 (419)
T ss_pred hhcCCcccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhCCCccccCCCc
Confidence 88654 34566788999999999976 59999999999999999999999999999988888886632211112221
Q ss_pred --------------------------CCCHHHHHHHHHhcccCccccCCHHHHhcCcccCcCCC
Q 042823 251 --------------------------SISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGE 288 (477)
Q Consensus 251 --------------------------~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~~~ 288 (477)
.+|+...+|+..+|..||.+|.||.++|+|+||.+...
T Consensus 306 ~~lp~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~h~~F~e~P~ 369 (419)
T KOG0663|consen 306 SELPAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLKHEYFRETPL 369 (419)
T ss_pred cccchhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhcccccccCCC
Confidence 14588999999999999999999999999999998543
|
|
| >KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-52 Score=358.93 Aligned_cols=256 Identities=31% Similarity=0.586 Sum_probs=235.3
Q ss_pred cccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEE
Q 042823 22 MLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHV 101 (477)
Q Consensus 22 ~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~l 101 (477)
.++|.++++||+|-||.||+|+.+.++-.||+|++.++.........++.+|+.|...| .||||+++|++|.+...+|+
T Consensus 21 l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L-~hpnilrlY~~fhd~~riyL 99 (281)
T KOG0580|consen 21 LDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHL-RHPNILRLYGYFHDSKRIYL 99 (281)
T ss_pred hhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeeccc-CCccHHhhhhheeccceeEE
Confidence 45789999999999999999999999999999999877655555667889999999999 79999999999999999999
Q ss_pred EEeccCCCchHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCC
Q 042823 102 VMELCEGGDLFDRII--AKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEE 179 (477)
Q Consensus 102 v~e~~~gg~L~~~l~--~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~ 179 (477)
++||.++|+|+..|. ..+++++..++.+++|++.||.|||.++|+||||||+|+|+ +..+.+||+|||.+....
T Consensus 100 ilEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k~VIhRdiKpenlLl---g~~~~lkiAdfGwsV~~p- 175 (281)
T KOG0580|consen 100 ILEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLKRVIHRDIKPENLLL---GSAGELKIADFGWSVHAP- 175 (281)
T ss_pred EEEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccCCcccCCCCHHHhcc---CCCCCeeccCCCceeecC-
Confidence 999999999999999 66789999999999999999999999999999999999999 778889999999887655
Q ss_pred Ccceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCCCCHHHHH
Q 042823 180 GQVYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKD 258 (477)
Q Consensus 180 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 258 (477)
.....+.+||..|.|||+..+ .++..+|+|++|++.|+++.|.+||...+..+.+..|.+....++ +.+|..+++
T Consensus 176 ~~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~etYkrI~k~~~~~p----~~is~~a~d 251 (281)
T KOG0580|consen 176 SNKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSHSETYKRIRKVDLKFP----STISGGAAD 251 (281)
T ss_pred CCCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhhHHHHHHHHHccccCC----cccChhHHH
Confidence 444567899999999999986 589999999999999999999999999999999999999888776 578999999
Q ss_pred HHHHhcccCccccCCHHHHhcCcccCcC
Q 042823 259 LVRRMLTKDPKRRITAAQVLEHPWLRES 286 (477)
Q Consensus 259 li~~~l~~dp~~R~s~~~~l~h~~~~~~ 286 (477)
+|.+||.++|.+|.+..|++.|||+...
T Consensus 252 lI~~ll~~~p~~r~~l~~v~~hpwI~a~ 279 (281)
T KOG0580|consen 252 LISRLLVKNPIERLALTEVMDHPWIVAN 279 (281)
T ss_pred HHHHHhccCccccccHHHHhhhHHHHhc
Confidence 9999999999999999999999998754
|
|
| >KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.6e-51 Score=377.14 Aligned_cols=266 Identities=28% Similarity=0.433 Sum_probs=230.5
Q ss_pred ccccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeC
Q 042823 17 AYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDE 96 (477)
Q Consensus 17 ~~~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~ 96 (477)
.+-.-.+.|.+...||.|..++||+|++..++..||||++....-. ...+.+.+|++.+..+ +||||++++..|..+
T Consensus 20 ~~p~n~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~--~~ld~l~kE~~~msl~-~HPNIv~~~~sFvv~ 96 (516)
T KOG0582|consen 20 EFPLNAKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCN--NDLDALRKEVQTMSLI-DHPNIVTYHCSFVVD 96 (516)
T ss_pred cCCCCccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhh--hhHHHHHHHHHHhhhc-CCCCcceEEEEEEec
Confidence 3344567899999999999999999999999999999999765432 3478899999998877 899999999999999
Q ss_pred CeEEEEEeccCCCchHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCc
Q 042823 97 TAVHVVMELCEGGDLFDRIIAK--GYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSA 174 (477)
Q Consensus 97 ~~~~lv~e~~~gg~L~~~l~~~--~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a 174 (477)
..+|+||.|+.+||+.++++.. ..++|..++.|++++++||.|||++|.||||||+.|||+ +.+|.|||+|||.+
T Consensus 97 ~~LWvVmpfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~G~IHRdvKAgnILi---~~dG~VkLadFgvs 173 (516)
T KOG0582|consen 97 SELWVVMPFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQNGHIHRDVKAGNILI---DSDGTVKLADFGVS 173 (516)
T ss_pred ceeEEeehhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhcCceecccccccEEE---cCCCcEEEcCceee
Confidence 9999999999999999999873 348999999999999999999999999999999999999 89999999999977
Q ss_pred cccCCC-cc----eecccccccccchhhhhh---hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCC
Q 042823 175 LLFEEG-QV----YRDIVGSGFYIAPEVLRR---RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDT 246 (477)
Q Consensus 175 ~~~~~~-~~----~~~~~gt~~y~aPE~~~~---~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~ 246 (477)
..+... .. +..++|||+|||||++.+ .|+.|+||||||++..||.+|..||....+.+++..-+++..+.+.
T Consensus 174 a~l~~~G~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl~tLqn~pp~~~ 253 (516)
T KOG0582|consen 174 ASLFDSGDRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKVLLLTLQNDPPTLL 253 (516)
T ss_pred eeecccCceeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHHHHHHhcCCCCCcc
Confidence 654322 11 145799999999999653 5999999999999999999999999998888888777777664322
Q ss_pred ------CCCCCCCHHHHHHHHHhcccCccccCCHHHHhcCcccCcCCC
Q 042823 247 ------DPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGE 288 (477)
Q Consensus 247 ------~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~~~ 288 (477)
......+..++.+|..||++||++|||++++|+|+||+....
T Consensus 254 t~~~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlkh~FFk~~k~ 301 (516)
T KOG0582|consen 254 TSGLDKDEDKKFSKSFREMIALCLVKDPSKRPTASKLLKHAFFKKAKS 301 (516)
T ss_pred cccCChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhccHHHhhccc
Confidence 122346778999999999999999999999999999987654
|
|
| >KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-51 Score=383.46 Aligned_cols=262 Identities=32% Similarity=0.571 Sum_probs=227.0
Q ss_pred ccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCcc-----------chhhHHHHHHHHHHHHhccCCCCee
Q 042823 19 EDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKM-----------RLAENDMIRREIQIRLYLSGQPNVV 87 (477)
Q Consensus 19 ~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~-----------~~~~~~~~~~e~~~~~~l~~hpniv 87 (477)
.....+|++++.||+|.||.|-+|++..+++.||+|++.+.... .....+.+++||.++++| +|||||
T Consensus 93 ~k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl-~H~nVV 171 (576)
T KOG0585|consen 93 RKQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKL-HHPNVV 171 (576)
T ss_pred ceehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhc-CCcCee
Confidence 34566899999999999999999999999999999999765321 122346889999999999 799999
Q ss_pred EEEEEEEeC--CeEEEEEeccCCCchHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCC
Q 042823 88 EFKSTYEDE--TAVHVVMELCEGGDLFDRIIAKGY-NSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNA 164 (477)
Q Consensus 88 ~~~~~~~~~--~~~~lv~e~~~gg~L~~~l~~~~~-~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~ 164 (477)
+++++..+. ..+|||+|||+.|.+.. .-..+. +++.+++.+++.++.||.|||.+|||||||||+|+|+ ++.+
T Consensus 172 ~LiEvLDDP~s~~~YlVley~s~G~v~w-~p~d~~els~~~Ar~ylrDvv~GLEYLH~QgiiHRDIKPsNLLl---~~~g 247 (576)
T KOG0585|consen 172 KLIEVLDDPESDKLYLVLEYCSKGEVKW-CPPDKPELSEQQARKYLRDVVLGLEYLHYQGIIHRDIKPSNLLL---SSDG 247 (576)
T ss_pred EEEEeecCcccCceEEEEEeccCCcccc-CCCCcccccHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEE---cCCC
Confidence 999999764 57999999999998743 333344 8999999999999999999999999999999999999 7889
Q ss_pred CEEEeecCCccccCC------Ccceecccccccccchhhhhh---h--cCCccchHhHHHHHHHHhhCCCCCCCCChhhH
Q 042823 165 LLKVTDFGSALLFEE------GQVYRDIVGSGFYIAPEVLRR---R--YGKEIDIWSAGVILYILLSGVPPFWAETKKGT 233 (477)
Q Consensus 165 ~~kl~Dfg~a~~~~~------~~~~~~~~gt~~y~aPE~~~~---~--~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~ 233 (477)
+|||+|||.+..+.. .......+|||.|+|||.+.+ . .+.+.||||+||+||.|+.|+.||.+....+.
T Consensus 248 ~VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~~~~l 327 (576)
T KOG0585|consen 248 TVKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDFELEL 327 (576)
T ss_pred cEEeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccchHHHH
Confidence 999999999876622 222345799999999999864 1 47789999999999999999999999999999
Q ss_pred HHHHHcCCccCCCCCCCCCCHHHHHHHHHhcccCccccCCHHHHhcCcccCcCC
Q 042823 234 YDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESG 287 (477)
Q Consensus 234 ~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~~ 287 (477)
+.+|....+.++.. +.+.+.+++||.+||.+||++|++..++..|||.....
T Consensus 328 ~~KIvn~pL~fP~~--pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpwvt~~g 379 (576)
T KOG0585|consen 328 FDKIVNDPLEFPEN--PEINEDLKDLIKRLLEKDPEQRITLPDIKLHPWVTRDG 379 (576)
T ss_pred HHHHhcCcccCCCc--ccccHHHHHHHHHHhhcChhheeehhhheecceeccCC
Confidence 99999998887654 47899999999999999999999999999999998764
|
|
| >KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-51 Score=399.28 Aligned_cols=260 Identities=29% Similarity=0.487 Sum_probs=237.5
Q ss_pred cccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeE
Q 042823 20 DVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAV 99 (477)
Q Consensus 20 ~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~ 99 (477)
.-.++|.+.++||+|+||+|++|..+.+++.||||+++|.......+.+....|-+|+....+||.+++++.+|+++.++
T Consensus 365 ~~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l 444 (694)
T KOG0694|consen 365 LTLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEHL 444 (694)
T ss_pred ccccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCeE
Confidence 34567999999999999999999999999999999999988777778889999999998888899999999999999999
Q ss_pred EEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccC-
Q 042823 100 HVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFE- 178 (477)
Q Consensus 100 ~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~- 178 (477)
|+||||+.||++. .+.+.+.+++..++.++..++.||.|||++|||+||||.+|||+ +..|++||+|||+++..-
T Consensus 445 ~fvmey~~Ggdm~-~~~~~~~F~e~rarfyaAev~l~L~fLH~~~IIYRDlKLdNiLL---D~eGh~kiADFGlcKe~m~ 520 (694)
T KOG0694|consen 445 FFVMEYVAGGDLM-HHIHTDVFSEPRARFYAAEVVLGLQFLHENGIIYRDLKLDNLLL---DTEGHVKIADFGLCKEGMG 520 (694)
T ss_pred EEEEEecCCCcEE-EEEecccccHHHHHHHHHHHHHHHHHHHhcCceeeecchhheEE---cccCcEEecccccccccCC
Confidence 9999999999953 34455789999999999999999999999999999999999999 899999999999998653
Q ss_pred CCcceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCCCCHHHH
Q 042823 179 EGQVYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAK 257 (477)
Q Consensus 179 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 257 (477)
.+....+++|||.|||||++.+ .|+.++|.|||||++||||.|.+||.+.+.++....|+..+..+|. .+|.++.
T Consensus 521 ~g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee~FdsI~~d~~~yP~----~ls~ea~ 596 (694)
T KOG0694|consen 521 QGDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEEEVFDSIVNDEVRYPR----FLSKEAI 596 (694)
T ss_pred CCCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHhcCCCCCCC----cccHHHH
Confidence 5556788999999999999986 6999999999999999999999999999999999999998877764 5799999
Q ss_pred HHHHHhcccCccccCCH-----HHHhcCcccCcCC
Q 042823 258 DLVRRMLTKDPKRRITA-----AQVLEHPWLRESG 287 (477)
Q Consensus 258 ~li~~~l~~dp~~R~s~-----~~~l~h~~~~~~~ 287 (477)
++++++|+++|++|..+ .++..||||+...
T Consensus 597 ~il~~ll~k~p~kRLG~~e~d~~~i~~hpFFr~i~ 631 (694)
T KOG0694|consen 597 AIMRRLLRKNPEKRLGSGERDAEDIKKHPFFRSID 631 (694)
T ss_pred HHHHHHhccCcccccCCCCCCchhhhhCCccccCC
Confidence 99999999999999964 7889999998754
|
|
| >KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-52 Score=387.44 Aligned_cols=277 Identities=28% Similarity=0.443 Sum_probs=237.6
Q ss_pred cccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeE
Q 042823 20 DVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAV 99 (477)
Q Consensus 20 ~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~ 99 (477)
.....|+..+.||+|+||.||+|.+..+++.||+|++..... ..+...+.+|+.++.++ ++|||.++|+.|..+..+
T Consensus 10 ~~~~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~--~deIediqqei~~Ls~~-~~~~it~yygsyl~g~~L 86 (467)
T KOG0201|consen 10 DPELLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEA--EDEIEDIQQEISVLSQC-DSPNITEYYGSYLKGTKL 86 (467)
T ss_pred CcccccccchhccccccceeeeeeeccccceEEEEEechhhc--chhhHHHHHHHHHHHhc-CcchHHhhhhheeecccH
Confidence 344568888999999999999999999999999999976543 23567889999999999 799999999999999999
Q ss_pred EEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCC
Q 042823 100 HVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEE 179 (477)
Q Consensus 100 ~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~ 179 (477)
+++||||.||++.+.+.....+.+..+..++++++.||.|||.++.+|||||+.||++ ...+.+||+|||.+.....
T Consensus 87 wiiMey~~gGsv~~lL~~~~~~~E~~i~~ilre~l~~l~ylH~~~kiHrDIKaanil~---s~~g~vkl~DfgVa~ql~~ 163 (467)
T KOG0201|consen 87 WIIMEYCGGGSVLDLLKSGNILDEFEIAVILREVLKGLDYLHSEKKIHRDIKAANILL---SESGDVKLADFGVAGQLTN 163 (467)
T ss_pred HHHHHHhcCcchhhhhccCCCCccceeeeehHHHHHHhhhhhhcceecccccccceeE---eccCcEEEEecceeeeeec
Confidence 9999999999999999988888999999999999999999999999999999999999 5568999999999988765
Q ss_pred Ccc-eecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCCCCHHHH
Q 042823 180 GQV-YRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAK 257 (477)
Q Consensus 180 ~~~-~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 257 (477)
... ..+++|||+|||||++.+ .|+.++||||||++++||++|.||+....+...+..|-+..++.. -..+|+.++
T Consensus 164 ~~~rr~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmrvlflIpk~~PP~L---~~~~S~~~k 240 (467)
T KOG0201|consen 164 TVKRRKTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMRVLFLIPKSAPPRL---DGDFSPPFK 240 (467)
T ss_pred hhhccccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcceEEEeccCCCCCcc---ccccCHHHH
Confidence 443 367899999999999986 799999999999999999999999988776544444443332221 125789999
Q ss_pred HHHHHhcccCccccCCHHHHhcCcccCcCCCCCCchHHHHHHHHHhhh
Q 042823 258 DLVRRMLTKDPKRRITAAQVLEHPWLRESGEASDDTSVILRMKQFRRM 305 (477)
Q Consensus 258 ~li~~~l~~dp~~R~s~~~~l~h~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (477)
+||..||.+||+.||||.++|+|+|++.....+.....+.+.++++..
T Consensus 241 EFV~~CL~k~P~~RpsA~~LLKh~FIk~a~k~s~L~~~i~r~~~~~~~ 288 (467)
T KOG0201|consen 241 EFVEACLDKNPEFRPSAKELLKHKFIKRAKKTSELKELIDRYKRWRVK 288 (467)
T ss_pred HHHHHHhhcCcccCcCHHHHhhhHHHHhcCCchHHHHHHHHHHHHhhc
Confidence 999999999999999999999999999866666666666666655443
|
|
| >cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-50 Score=383.93 Aligned_cols=254 Identities=30% Similarity=0.522 Sum_probs=225.0
Q ss_pred ccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 042823 23 LHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVV 102 (477)
Q Consensus 23 ~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~lv 102 (477)
++|++.+.||+|+||.||+|.++.+++.||+|++.............+.+|+.++..+ +||||+++++++.+...+|+|
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~~lv 79 (291)
T cd05612 1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEV-SHPFIIRLFWTEHDQRFLYML 79 (291)
T ss_pred CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhC-CCCcHhhhHhhhccCCeEEEE
Confidence 4799999999999999999999999999999998754332333456688999999999 799999999999999999999
Q ss_pred EeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCCCcc
Q 042823 103 MELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQV 182 (477)
Q Consensus 103 ~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~ 182 (477)
|||++||+|.+++...+.+++..+..++.|++.||.|||++||+||||||+||++ +.++.+||+|||++......
T Consensus 80 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~NIli---~~~~~~kl~Dfg~~~~~~~~-- 154 (291)
T cd05612 80 MEYVPGGELFSYLRNSGRFSNSTGLFYASEIVCALEYLHSKEIVYRDLKPENILL---DKEGHIKLTDFGFAKKLRDR-- 154 (291)
T ss_pred EeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEE---CCCCCEEEEecCcchhccCC--
Confidence 9999999999999998899999999999999999999999999999999999999 67789999999998765432
Q ss_pred eecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCCCCHHHHHHHH
Q 042823 183 YRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVR 261 (477)
Q Consensus 183 ~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~ 261 (477)
.....||+.|+|||++.+ .++.++|||||||++|+|++|..||.+.+.......+..+...++ ..+++.++++|+
T Consensus 155 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~----~~~~~~~~~li~ 230 (291)
T cd05612 155 TWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPFGIYEKILAGKLEFP----RHLDLYAKDLIK 230 (291)
T ss_pred cccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCcCCC----ccCCHHHHHHHH
Confidence 234579999999999875 578999999999999999999999998888888888887765544 346899999999
Q ss_pred HhcccCccccCC-----HHHHhcCcccCcC
Q 042823 262 RMLTKDPKRRIT-----AAQVLEHPWLRES 286 (477)
Q Consensus 262 ~~l~~dp~~R~s-----~~~~l~h~~~~~~ 286 (477)
+||+.||.+||+ +.++++||||+..
T Consensus 231 ~~l~~dp~~R~~~~~~~~~~~l~h~~~~~~ 260 (291)
T cd05612 231 KLLVVDRTRRLGNMKNGADDVKNHRWFKSV 260 (291)
T ss_pred HHcCCCHHHccCCccCCHHHHhcCccccCC
Confidence 999999999995 9999999999753
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt |
| >KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-51 Score=365.26 Aligned_cols=265 Identities=35% Similarity=0.605 Sum_probs=237.6
Q ss_pred cccccccc-cccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCe
Q 042823 20 DVMLHYFF-GRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETA 98 (477)
Q Consensus 20 ~~~~~Y~~-~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~ 98 (477)
.|.+-|.+ .+.||+|+|+.|-.|+...+|++||||+|.+.+. ....++.+|+.++.+..+|+||++++++|+++..
T Consensus 74 ~F~d~YkLt~e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~g---HsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~~ 150 (463)
T KOG0607|consen 74 KFEDMYKLTSELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPG---HSRSRVFREVETFYQCQGHKNILQLIEFFEDDTR 150 (463)
T ss_pred hHHHHHHhHHHHhcCccceeeeeeeeeccchhhhhhhhhcCCc---hHHHHHHHHHHHHHHhcCCccHHHHHHHhcccce
Confidence 47777887 5799999999999999999999999999988753 4567899999999999999999999999999999
Q ss_pred EEEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccC
Q 042823 99 VHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFE 178 (477)
Q Consensus 99 ~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~ 178 (477)
+|+|||-+.||+|+..|.++..++|.++..++..|+.||.|||.+||.||||||+|||....+.-.-||||||.+..-..
T Consensus 151 FYLVfEKm~GGplLshI~~~~~F~E~EAs~vvkdia~aLdFlH~kgIAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg~k 230 (463)
T KOG0607|consen 151 FYLVFEKMRGGPLLSHIQKRKHFNEREASRVVKDIASALDFLHTKGIAHRDLKPENILCESPNKVSPVKICDFDLGSGIK 230 (463)
T ss_pred EEEEEecccCchHHHHHHHhhhccHHHHHHHHHHHHHHHHHHhhcCcccccCCccceeecCCCCcCceeeeccccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999777777789999998775432
Q ss_pred CC--------cceecccccccccchhhhh---h---hcCCccchHhHHHHHHHHhhCCCCCCCCCh--------------
Q 042823 179 EG--------QVYRDIVGSGFYIAPEVLR---R---RYGKEIDIWSAGVILYILLSGVPPFWAETK-------------- 230 (477)
Q Consensus 179 ~~--------~~~~~~~gt~~y~aPE~~~---~---~~~~~~DiwslG~il~~l~tg~~pf~~~~~-------------- 230 (477)
.+ +...+.+|+..|||||+.. + .|+.++|.||||||+|.|++|++||.+...
T Consensus 231 ~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdrGe~Cr~C 310 (463)
T KOG0607|consen 231 LNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWDRGEVCRVC 310 (463)
T ss_pred cCCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCccCCCccHHH
Confidence 11 2234567888999999863 2 489999999999999999999999977542
Q ss_pred -hhHHHHHHcCCccCCCCCCCCCCHHHHHHHHHhcccCccccCCHHHHhcCcccCcCC
Q 042823 231 -KGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESG 287 (477)
Q Consensus 231 -~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~~ 287 (477)
...+..|..|.+.|+...|..+|.+++++|+.+|..+|.+|.++.++++|||+....
T Consensus 311 Q~~LFesIQEGkYeFPdkdWahIS~eakdlisnLlvrda~~rlsa~~vlnhPw~~~~~ 368 (463)
T KOG0607|consen 311 QNKLFESIQEGKYEFPDKDWAHISSEAKDLISNLLVRDAKQRLSAAQVLNHPWVQRCA 368 (463)
T ss_pred HHHHHHHHhccCCcCChhhhHHhhHHHHHHHHHHHhccHHhhhhhhhccCCccccccc
Confidence 456788999999999999999999999999999999999999999999999998654
|
|
| >PTZ00263 protein kinase A catalytic subunit; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-50 Score=388.94 Aligned_cols=255 Identities=31% Similarity=0.573 Sum_probs=226.4
Q ss_pred cccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEE
Q 042823 22 MLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHV 101 (477)
Q Consensus 22 ~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~l 101 (477)
.++|.+.+.||+|+||.||+|.++.+++.||+|++.+...........+.+|+.++..+ +||||+++++++.+++.+|+
T Consensus 17 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~~l 95 (329)
T PTZ00263 17 LSDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMEL-SHPFIVNMMCSFQDENRVYF 95 (329)
T ss_pred chheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhC-CCCCCCcEEEEEEcCCEEEE
Confidence 46899999999999999999999999999999999764333334456788999999999 79999999999999999999
Q ss_pred EEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCCCc
Q 042823 102 VMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQ 181 (477)
Q Consensus 102 v~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~ 181 (477)
|||||.||+|.+++...+.+++..+..++.||+.||.|||++||+||||||+||++ +.++.+||+|||++.......
T Consensus 96 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~NIll---~~~~~~kl~Dfg~~~~~~~~~ 172 (329)
T PTZ00263 96 LLEFVVGGELFTHLRKAGRFPNDVAKFYHAELVLAFEYLHSKDIIYRDLKPENLLL---DNKGHVKVTDFGFAKKVPDRT 172 (329)
T ss_pred EEcCCCCChHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEE---CCCCCEEEeeccCceEcCCCc
Confidence 99999999999999998899999999999999999999999999999999999999 778899999999998664432
Q ss_pred ceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCCCCHHHHHHH
Q 042823 182 VYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLV 260 (477)
Q Consensus 182 ~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li 260 (477)
....||+.|+|||++.+ .++.++|||||||++|+|++|..||.+......+..+..+...++ ..++..+++||
T Consensus 173 --~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~p----~~~~~~~~~li 246 (329)
T PTZ00263 173 --FTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFRIYEKILAGRLKFP----NWFDGRARDLV 246 (329)
T ss_pred --ceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCHHHHHHHHhcCCcCCC----CCCCHHHHHHH
Confidence 34579999999999875 578999999999999999999999998888788888887765543 24789999999
Q ss_pred HHhcccCccccCC-----HHHHhcCcccCcC
Q 042823 261 RRMLTKDPKRRIT-----AAQVLEHPWLRES 286 (477)
Q Consensus 261 ~~~l~~dp~~R~s-----~~~~l~h~~~~~~ 286 (477)
.+||+.||.+||+ +.++++||||...
T Consensus 247 ~~~L~~dP~~R~~~~~~~~~~ll~hp~f~~~ 277 (329)
T PTZ00263 247 KGLLQTDHTKRLGTLKGGVADVKNHPYFHGA 277 (329)
T ss_pred HHHhhcCHHHcCCCCCCCHHHHhcCCccCCC
Confidence 9999999999997 7999999999763
|
|
| >cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-49 Score=390.86 Aligned_cols=259 Identities=29% Similarity=0.469 Sum_probs=221.0
Q ss_pred ccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 042823 23 LHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVV 102 (477)
Q Consensus 23 ~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~lv 102 (477)
++|++++.||+|+||+||+|.++.+++.||+|++.+...........+.+|+.++..+ +||||+++++.+.+...+|+|
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~-~~~~iv~~~~~~~~~~~~~lv 79 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEA-DSLWVVKMFYSFQDKLNLYLI 79 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhC-CCCCcceEEEEEecCCeEEEE
Confidence 4799999999999999999999999999999999764333333456778899999998 799999999999999999999
Q ss_pred EeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCCCc-
Q 042823 103 MELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQ- 181 (477)
Q Consensus 103 ~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~- 181 (477)
||||+||+|.+++.+.+.+++..++.++.|++.||.|||++||+||||||+|||+ +.++.+||+|||++.......
T Consensus 80 ~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~givHrDlKp~NILi---~~~~~vkL~DFGla~~~~~~~~ 156 (363)
T cd05628 80 MEFLPGGDMMTLLMKKDTLTEEETQFYIAETVLAIDSIHQLGFIHRDIKPDNLLL---DSKGHVKLSDFGLCTGLKKAHR 156 (363)
T ss_pred EcCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEE---CCCCCEEEeeccCccccccccc
Confidence 9999999999999998999999999999999999999999999999999999999 678899999999987542210
Q ss_pred -----------------------------------ceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCC
Q 042823 182 -----------------------------------VYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPF 225 (477)
Q Consensus 182 -----------------------------------~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf 225 (477)
.....+||+.|+|||++.+ .++.++|||||||++|+|++|.+||
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~Pf 236 (363)
T cd05628 157 TEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPF 236 (363)
T ss_pred ccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCCCCC
Confidence 0123579999999999865 5899999999999999999999999
Q ss_pred CCCChhhHHHHHHcCCccCCCCCCCCCCHHHHHHHHHhcccCcc---ccCCHHHHhcCcccCcC
Q 042823 226 WAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKDPK---RRITAAQVLEHPWLRES 286 (477)
Q Consensus 226 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~---~R~s~~~~l~h~~~~~~ 286 (477)
.+.+....+..+.........+....++++++++|.+|+. +|. .||++.++++||||+..
T Consensus 237 ~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~~-~~~~r~~r~~~~ei~~hp~f~~~ 299 (363)
T cd05628 237 CSETPQETYKKVMNWKETLIFPPEVPISEKAKDLILRFCC-EWEHRIGAPGVEEIKTNPFFEGV 299 (363)
T ss_pred CCCCHHHHHHHHHcCcCcccCCCcCCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhCCCCCCCC
Confidence 9888888888877644333333334689999999999775 454 45899999999999864
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus |
| >cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-49 Score=385.36 Aligned_cols=250 Identities=32% Similarity=0.538 Sum_probs=219.2
Q ss_pred ccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEeccCC
Q 042823 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVVMELCEG 108 (477)
Q Consensus 29 ~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~lv~e~~~g 108 (477)
+.||+|+||.||+|.++.+|+.||+|++.+...........+.+|+.++..+ +||||+++++++...+.+|+||||++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l-~hp~i~~~~~~~~~~~~~~lv~e~~~~ 79 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNT-RHPFLTALKYSFQTHDRLCFVMEYANG 79 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhC-CCCCCCCEEEEEEcCCEEEEEEeCCCC
Confidence 4699999999999999999999999999764333333455677899999999 799999999999999999999999999
Q ss_pred CchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccC-CCcceeccc
Q 042823 109 GDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFE-EGQVYRDIV 187 (477)
Q Consensus 109 g~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~-~~~~~~~~~ 187 (477)
|+|.+++...+.+++..+..++.||+.||.|||++||+||||||+||++ +.++.+||+|||++.... ........+
T Consensus 80 ~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivHrDlkp~NIll---~~~~~~kl~DfG~a~~~~~~~~~~~~~~ 156 (323)
T cd05571 80 GELFFHLSRERVFSEDRARFYGAEIVSALGYLHSCDVVYRDLKLENLML---DKDGHIKITDFGLCKEGISDGATMKTFC 156 (323)
T ss_pred CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEE---CCCCCEEEeeCCCCcccccCCCccccee
Confidence 9999999998899999999999999999999999999999999999999 778899999999987532 222334567
Q ss_pred ccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCCCCHHHHHHHHHhccc
Q 042823 188 GSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTK 266 (477)
Q Consensus 188 gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~ 266 (477)
||+.|+|||++.+ .++.++||||+||++|+|++|..||...+.......+..+...++ ..+++++.+||.+||+.
T Consensus 157 gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~p----~~~~~~~~~li~~~L~~ 232 (323)
T cd05571 157 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFP----RTLSPEAKSLLAGLLKK 232 (323)
T ss_pred cCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCHHHHHHHHHcCCCCCC----CCCCHHHHHHHHHHccC
Confidence 9999999999875 589999999999999999999999988877777777776655443 36899999999999999
Q ss_pred CccccC-----CHHHHhcCcccCcC
Q 042823 267 DPKRRI-----TAAQVLEHPWLRES 286 (477)
Q Consensus 267 dp~~R~-----s~~~~l~h~~~~~~ 286 (477)
||++|| ++.++++||||...
T Consensus 233 dP~~R~~~~~~~~~~ll~h~~f~~~ 257 (323)
T cd05571 233 DPKQRLGGGPEDAKEIMEHRFFASI 257 (323)
T ss_pred CHHHcCCCCCCCHHHHHcCCCcCCC
Confidence 999999 89999999999764
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be |
| >cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-49 Score=390.93 Aligned_cols=259 Identities=29% Similarity=0.523 Sum_probs=223.3
Q ss_pred ccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 042823 23 LHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVV 102 (477)
Q Consensus 23 ~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~lv 102 (477)
++|++.+.||+|+||+||+|.++.+++.||+|++.+...........+.+|+.++..+ +||||+++++++.++..+|+|
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l-~h~~iv~~~~~~~~~~~~~lv 79 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEA-DNPWVVKLYYSFQDENYLYLI 79 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhC-CCCCCcceEEEEEcCCeEEEE
Confidence 4799999999999999999999999999999999754332333455678899999999 799999999999999999999
Q ss_pred EeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCCCc-
Q 042823 103 MELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQ- 181 (477)
Q Consensus 103 ~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~- 181 (477)
||||+||+|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++.......
T Consensus 80 ~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~---~~~~~~kl~Dfg~~~~~~~~~~ 156 (364)
T cd05599 80 MEYLPGGDMMTLLMKKDTFTEEETRFYIAETILAIDSIHKLGYIHRDIKPDNLLL---DAKGHIKLSDFGLCTGLKKSHR 156 (364)
T ss_pred ECCCCCcHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEE---CCCCCEEEeecccceecccccc
Confidence 9999999999999988889999999999999999999999999999999999999 778899999999886542110
Q ss_pred --------------------------------------ceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCC
Q 042823 182 --------------------------------------VYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGV 222 (477)
Q Consensus 182 --------------------------------------~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~ 222 (477)
.....+||+.|+|||++.+ .++.++|||||||++|+|++|.
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~G~ 236 (364)
T cd05599 157 TEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLVGY 236 (364)
T ss_pred ccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhhcCC
Confidence 0112469999999999864 6899999999999999999999
Q ss_pred CCCCCCChhhHHHHHHcCCccCCCCCCCCCCHHHHHHHHHhcccCccccCC---HHHHhcCcccCcC
Q 042823 223 PPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRIT---AAQVLEHPWLRES 286 (477)
Q Consensus 223 ~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s---~~~~l~h~~~~~~ 286 (477)
+||...+.......+......+..+....+|+++++||.+||. +|.+|++ +.++++||||+..
T Consensus 237 ~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~h~~~~~~ 302 (364)
T cd05599 237 PPFCSDNPQETYRKIINWKETLQFPDEVPLSPEAKDLIKRLCC-EAERRLGNNGVNEIKSHPFFKGV 302 (364)
T ss_pred CCCCCCCHHHHHHHHHcCCCccCCCCCCCCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhcCCCcCCC
Confidence 9999888777777776654443333334679999999999997 9999998 9999999999864
|
Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica |
| >cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-49 Score=375.76 Aligned_cols=259 Identities=29% Similarity=0.457 Sum_probs=216.7
Q ss_pred cccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEE
Q 042823 24 HYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVVM 103 (477)
Q Consensus 24 ~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~lv~ 103 (477)
.|++.+.||+|+||.||+|.+..+++.||+|++.+...........+.+|+.++..+ +||||+++++++.+.+.+++||
T Consensus 1 ~f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l-~~~~iv~~~~~~~~~~~~~lv~ 79 (285)
T cd05631 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKV-NSRFVVSLAYAYETKDALCLVL 79 (285)
T ss_pred CceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhc-CCCcEEEEEEEEccCCeEEEEE
Confidence 378889999999999999999999999999998755433223344577899999999 7999999999999999999999
Q ss_pred eccCCCchHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCCCc
Q 042823 104 ELCEGGDLFDRIIAK--GYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQ 181 (477)
Q Consensus 104 e~~~gg~L~~~l~~~--~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~ 181 (477)
|||+||+|.+++... ..+++..+..++.|++.||.|||++||+||||||+||++ +.++.+||+|||++.......
T Consensus 80 e~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nill---~~~~~~kl~Dfg~~~~~~~~~ 156 (285)
T cd05631 80 TIMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRERIVYRDLKPENILL---DDRGHIRISDLGLAVQIPEGE 156 (285)
T ss_pred EecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEE---CCCCCEEEeeCCCcEEcCCCC
Confidence 999999998887653 358999999999999999999999999999999999999 677889999999998765444
Q ss_pred ceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCCCCHHHHHHH
Q 042823 182 VYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLV 260 (477)
Q Consensus 182 ~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li 260 (477)
......||+.|+|||++.+ .++.++||||+||++|+|++|.+||...........+..............+|+++.+|+
T Consensus 157 ~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li 236 (285)
T cd05631 157 TVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREEVDRRVKEDQEEYSEKFSEDAKSIC 236 (285)
T ss_pred eecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchhHHHHHHHhhcccccCCccCCHHHHHHH
Confidence 4455689999999999864 689999999999999999999999987654333332222211122223346899999999
Q ss_pred HHhcccCccccCC-----HHHHhcCcccCcC
Q 042823 261 RRMLTKDPKRRIT-----AAQVLEHPWLRES 286 (477)
Q Consensus 261 ~~~l~~dp~~R~s-----~~~~l~h~~~~~~ 286 (477)
++||+.||.+||+ ++++++||||...
T Consensus 237 ~~~l~~~P~~R~~~~~~~~~~~~~h~~~~~~ 267 (285)
T cd05631 237 RMLLTKNPKERLGCRGNGAAGVKQHPIFKNI 267 (285)
T ss_pred HHHhhcCHHHhcCCCCCCHHHHhcCHhhcCC
Confidence 9999999999997 8999999999764
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i |
| >cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-49 Score=385.32 Aligned_cols=258 Identities=29% Similarity=0.464 Sum_probs=224.4
Q ss_pred ccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 042823 23 LHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVV 102 (477)
Q Consensus 23 ~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~lv 102 (477)
++|++.+.||+|+||.||+|.+..+++.||+|++.+...........+.+|+.++..+ +||||+++++++.....+|+|
T Consensus 1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~-~h~~iv~~~~~~~~~~~~~lv 79 (333)
T cd05600 1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTT-KSEWLVKLLYAFQDDEYLYLA 79 (333)
T ss_pred CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhC-CCCCCccEEEEEEcCCEEEEE
Confidence 4799999999999999999999999999999999764332233456678899999999 699999999999999999999
Q ss_pred EeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCCCcc
Q 042823 103 MELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQV 182 (477)
Q Consensus 103 ~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~ 182 (477)
||||+||+|.+++...+.+++..++.++.||+.||.|||++||+||||||+||++ +..+.+||+|||++..... .
T Consensus 80 ~e~~~g~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~---~~~~~~kL~Dfg~a~~~~~--~ 154 (333)
T cd05600 80 MEYVPGGDFRTLLNNLGVLSEDHARFYMAEMFEAVDALHELGYIHRDLKPENFLI---DASGHIKLTDFGLSKGIVT--Y 154 (333)
T ss_pred EeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEE---CCCCCEEEEeCcCCccccc--c
Confidence 9999999999999988889999999999999999999999999999999999999 7788999999999976543 2
Q ss_pred eecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCC----CCCCHHHH
Q 042823 183 YRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPW----PSISSTAK 257 (477)
Q Consensus 183 ~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~----~~~~~~~~ 257 (477)
.....||+.|+|||++.+ .++.++|||||||++|+|++|.+||...+..+....+.........+.+ ..+++++.
T Consensus 155 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~ 234 (333)
T cd05600 155 ANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENLKYWKETLQRPVYDDPRFNLSDEAW 234 (333)
T ss_pred cCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHHHHHHHHhccccccCCCCCccccccCHHHH
Confidence 345679999999999875 6899999999999999999999999988877777766654332222222 25789999
Q ss_pred HHHHHhcccCccccCCHHHHhcCcccCcC
Q 042823 258 DLVRRMLTKDPKRRITAAQVLEHPWLRES 286 (477)
Q Consensus 258 ~li~~~l~~dp~~R~s~~~~l~h~~~~~~ 286 (477)
++|.+||..+|.+||++.++++||||...
T Consensus 235 ~li~~~l~~~~~rr~s~~~ll~h~~~~~~ 263 (333)
T cd05600 235 DLITKLINDPSRRFGSLEDIKNHPFFKEV 263 (333)
T ss_pred HHHHHHhhChhhhcCCHHHHHhCcccCCC
Confidence 99999999999999999999999999864
|
Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. |
| >PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-49 Score=384.75 Aligned_cols=259 Identities=31% Similarity=0.520 Sum_probs=226.6
Q ss_pred cccccccccccccccccCCeEEEEEEEccCC-ceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeC
Q 042823 18 YEDVMLHYFFGRMLGRGQFGVSYLCTENSTN-RPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDE 96 (477)
Q Consensus 18 ~~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~-~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~ 96 (477)
...-.++|.+.+.||+|+||.||+|.++.++ ..||+|++.+...........+.+|+.++..+ +||||+++++++.+.
T Consensus 25 ~~~~~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~Iv~~~~~~~~~ 103 (340)
T PTZ00426 25 NKMKYEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYI-NHPFCVNLYGSFKDE 103 (340)
T ss_pred CCCChhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhC-CCCCCcceEEEEEeC
Confidence 3345568999999999999999999876655 68999998754333334456788899999999 799999999999999
Q ss_pred CeEEEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccc
Q 042823 97 TAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALL 176 (477)
Q Consensus 97 ~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~ 176 (477)
..+|+|||||+||+|.+++...+.+++..+..++.|++.||.|||++||+||||||+|||+ +.++.+||+|||++..
T Consensus 104 ~~~~lv~Ey~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl---~~~~~ikL~DFG~a~~ 180 (340)
T PTZ00426 104 SYLYLVLEFVIGGEFFTFLRRNKRFPNDVGCFYAAQIVLIFEYLQSLNIVYRDLKPENLLL---DKDGFIKMTDFGFAKV 180 (340)
T ss_pred CEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEE---CCCCCEEEecCCCCee
Confidence 9999999999999999999998899999999999999999999999999999999999999 7788999999999986
Q ss_pred cCCCcceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCCCCHH
Q 042823 177 FEEGQVYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISST 255 (477)
Q Consensus 177 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 255 (477)
.... .....||+.|+|||++.+ .++.++||||+||++|+|++|.+||.+.+.......+..+...++ +.+++.
T Consensus 181 ~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~i~~~~~~~p----~~~~~~ 254 (340)
T PTZ00426 181 VDTR--TYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPLLIYQKILEGIIYFP----KFLDNN 254 (340)
T ss_pred cCCC--cceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCHHHHHHHHhcCCCCCC----CCCCHH
Confidence 5432 235679999999999875 588999999999999999999999998888777888887765543 357899
Q ss_pred HHHHHHHhcccCccccC-----CHHHHhcCcccCcC
Q 042823 256 AKDLVRRMLTKDPKRRI-----TAAQVLEHPWLRES 286 (477)
Q Consensus 256 ~~~li~~~l~~dp~~R~-----s~~~~l~h~~~~~~ 286 (477)
++++|++||+.||++|+ +++++++||||...
T Consensus 255 ~~~li~~~l~~dp~~R~~~~~~~~~~~~~hp~f~~~ 290 (340)
T PTZ00426 255 CKHLMKKLLSHDLTKRYGNLKKGAQNVKEHPWFGNI 290 (340)
T ss_pred HHHHHHHHcccCHHHcCCCCCCCHHHHHcCCCcCCC
Confidence 99999999999999995 89999999999764
|
|
| >KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-49 Score=364.60 Aligned_cols=261 Identities=31% Similarity=0.509 Sum_probs=231.7
Q ss_pred cccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEE
Q 042823 22 MLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHV 101 (477)
Q Consensus 22 ~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~l 101 (477)
.+++++++.||.|.-|+||+|..+.++..+|+|++.+..........+...|-.|+..+ +||.++++|..|+.+.+.|+
T Consensus 76 l~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~l-DHPFlPTLYa~fet~~~~cl 154 (459)
T KOG0610|consen 76 LRHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLL-DHPFLPTLYASFETDKYSCL 154 (459)
T ss_pred HHHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhc-CCCccchhhheeeccceeEE
Confidence 35688899999999999999999999999999999887654445566777888898888 89999999999999999999
Q ss_pred EEeccCCCchHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCC
Q 042823 102 VMELCEGGDLFDRIIAK--GYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEE 179 (477)
Q Consensus 102 v~e~~~gg~L~~~l~~~--~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~ 179 (477)
|||||+||+|...++++ +.+++..++.++..++.||+|||-.|||.|||||+|||+ .++|+|-|+||.++.....
T Consensus 155 ~meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHmlGivYRDLKPENILv---redGHIMLsDFDLS~~~~~ 231 (459)
T KOG0610|consen 155 VMEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHMLGIVYRDLKPENILV---REDGHIMLSDFDLSLRCPV 231 (459)
T ss_pred EEecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhhceeeccCCcceeEE---ecCCcEEeeeccccccCCC
Confidence 99999999998888764 579999999999999999999999999999999999999 8899999999987632100
Q ss_pred ---------------------------------C-c-----------------------ceecccccccccchhhhhh-h
Q 042823 180 ---------------------------------G-Q-----------------------VYRDIVGSGFYIAPEVLRR-R 201 (477)
Q Consensus 180 ---------------------------------~-~-----------------------~~~~~~gt~~y~aPE~~~~-~ 201 (477)
. . ....++||-.|+|||++.| .
T Consensus 232 ~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~G 311 (459)
T KOG0610|consen 232 SPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEG 311 (459)
T ss_pred CCeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecCC
Confidence 0 0 0123689999999999987 5
Q ss_pred cCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCCCCHHHHHHHHHhcccCccccCC----HHHH
Q 042823 202 YGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRIT----AAQV 277 (477)
Q Consensus 202 ~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s----~~~~ 277 (477)
.+.++|.|+|||.+|||+.|..||.+.+..+.+.+|......|+.. +.+|..+++||+++|.+||.+|.. |++|
T Consensus 312 HgsAVDWWtfGIflYEmLyG~TPFKG~~~~~Tl~NIv~~~l~Fp~~--~~vs~~akDLIr~LLvKdP~kRlg~~rGA~eI 389 (459)
T KOG0610|consen 312 HGSAVDWWTFGIFLYEMLYGTTPFKGSNNKETLRNIVGQPLKFPEE--PEVSSAAKDLIRKLLVKDPSKRLGSKRGAAEI 389 (459)
T ss_pred CCchhhHHHHHHHHHHHHhCCCCcCCCCchhhHHHHhcCCCcCCCC--CcchhHHHHHHHHHhccChhhhhccccchHHh
Confidence 8999999999999999999999999999999999999999888775 378899999999999999999998 9999
Q ss_pred hcCcccCcCCC
Q 042823 278 LEHPWLRESGE 288 (477)
Q Consensus 278 l~h~~~~~~~~ 288 (477)
-+||||+....
T Consensus 390 K~HpFF~gVnW 400 (459)
T KOG0610|consen 390 KRHPFFEGVNW 400 (459)
T ss_pred hcCccccCCCh
Confidence 99999987643
|
|
| >KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-49 Score=358.64 Aligned_cols=261 Identities=28% Similarity=0.434 Sum_probs=222.2
Q ss_pred cccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCC-eeEEEEEEEeCC---
Q 042823 22 MLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPN-VVEFKSTYEDET--- 97 (477)
Q Consensus 22 ~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpn-iv~~~~~~~~~~--- 97 (477)
...|..+++||+|+||+||+|+++.+|+.||+|++........ .-....+|+.++..| +|+| ||++++++.+.+
T Consensus 10 ~~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG-~P~taiREisllk~L-~~~~~iv~L~dv~~~~~~~~ 87 (323)
T KOG0594|consen 10 MFDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEG-VPSTAIREISLLKRL-SHANHIVRLHDVIHTSNNHR 87 (323)
T ss_pred HHHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccC-CCchhhHHHHHHHHh-CCCcceEEEEeeeeeccccc
Confidence 6678899999999999999999999999999999976543221 223456899999999 6999 999999998877
Q ss_pred ---eEEEEEeccCCCchHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEee
Q 042823 98 ---AVHVVMELCEGGDLFDRIIAKG----YNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTD 170 (477)
Q Consensus 98 ---~~~lv~e~~~gg~L~~~l~~~~----~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~D 170 (477)
.+++|+||++- +|.+++.... .++...++.+++||+.||+|||+++|+||||||+||++ ++.+.+||+|
T Consensus 88 ~~~~l~lvfe~~d~-DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~~IlHRDLKPQNlLi---~~~G~lKlaD 163 (323)
T KOG0594|consen 88 GIGKLYLVFEFLDR-DLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSHGILHRDLKPQNLLI---SSSGVLKLAD 163 (323)
T ss_pred ccceEEEEEEeecc-cHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCcceEEE---CCCCcEeeec
Confidence 89999999976 9999998755 57788999999999999999999999999999999999 7799999999
Q ss_pred cCCccccC-CCcceecccccccccchhhhhh--hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCC
Q 042823 171 FGSALLFE-EGQVYRDIVGSGFYIAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTD 247 (477)
Q Consensus 171 fg~a~~~~-~~~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~ 247 (477)
||+|+... +.......++|.+|+|||++.+ .|+..+||||+|||++||+++++.|.+.++.+++..|.+-.-.....
T Consensus 164 FGlAra~~ip~~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~~lGtP~e~ 243 (323)
T KOG0594|consen 164 FGLARAFSIPMRTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLLGTPNEK 243 (323)
T ss_pred cchHHHhcCCcccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHcCCCCcc
Confidence 99999776 4444666789999999999876 49999999999999999999999999999988887776532222112
Q ss_pred CC--------------------------CCCCHHHHHHHHHhcccCccccCCHHHHhcCcccCcCCC
Q 042823 248 PW--------------------------PSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGE 288 (477)
Q Consensus 248 ~~--------------------------~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~~~ 288 (477)
.| +..++...+++.+||+.+|.+|.|+..+|.||||.....
T Consensus 244 ~Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h~yf~~~~~ 310 (323)
T KOG0594|consen 244 DWPGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTHPYFSELPE 310 (323)
T ss_pred CCCCccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcChhhccccc
Confidence 22 223458999999999999999999999999999987643
|
|
| >cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.8e-49 Score=378.13 Aligned_cols=248 Identities=30% Similarity=0.528 Sum_probs=217.8
Q ss_pred ccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEeccCCCc
Q 042823 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVVMELCEGGD 110 (477)
Q Consensus 31 iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~lv~e~~~gg~ 110 (477)
||+|+||.||+|.+..+++.||+|++.+...........+.+|+.++.++ +||||+++++++...+.+|+|||||+||+
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~g~ 79 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQV-NCPFIVPLKFSFQSPEKLYLVLAFINGGE 79 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhC-CCCcEeceeeEEecCCeEEEEEcCCCCCc
Confidence 79999999999999999999999998754333334456678899999999 79999999999999999999999999999
Q ss_pred hHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCC-Ccceeccccc
Q 042823 111 LFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEE-GQVYRDIVGS 189 (477)
Q Consensus 111 L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~-~~~~~~~~gt 189 (477)
|.+++...+.+++..+..++.||+.||.|||++||+||||||+||++ +.++.+||+|||++..... .......+||
T Consensus 80 L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~HrDlkp~Nili---~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt 156 (312)
T cd05585 80 LFHHLQREGRFDLSRARFYTAELLCALENLHKFNVIYRDLKPENILL---DYQGHIALCDFGLCKLNMKDDDKTNTFCGT 156 (312)
T ss_pred HHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHeEE---CCCCcEEEEECcccccCccCCCccccccCC
Confidence 99999988889999999999999999999999999999999999999 7788999999999875422 2223446799
Q ss_pred ccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCCCCHHHHHHHHHhcccCc
Q 042823 190 GFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKDP 268 (477)
Q Consensus 190 ~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp 268 (477)
+.|+|||++.+ .++.++||||+||++|+|++|.+||.+.+.......+......++ ..+++.+++||.+||..||
T Consensus 157 ~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~li~~~L~~dp 232 (312)
T cd05585 157 PEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENVNEMYRKILQEPLRFP----DGFDRDAKDLLIGLLSRDP 232 (312)
T ss_pred cccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCHHHHHHHHHcCCCCCC----CcCCHHHHHHHHHHcCCCH
Confidence 99999999875 589999999999999999999999998888777777777655443 4678999999999999999
Q ss_pred cccC---CHHHHhcCcccCcC
Q 042823 269 KRRI---TAAQVLEHPWLRES 286 (477)
Q Consensus 269 ~~R~---s~~~~l~h~~~~~~ 286 (477)
.+|| ++.++++||||...
T Consensus 233 ~~R~~~~~~~e~l~hp~~~~~ 253 (312)
T cd05585 233 TRRLGYNGAQEIKNHPFFSQL 253 (312)
T ss_pred HHcCCCCCHHHHHcCCCcCCC
Confidence 9997 58999999999764
|
Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl |
| >cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-49 Score=389.88 Aligned_cols=258 Identities=31% Similarity=0.500 Sum_probs=221.8
Q ss_pred cccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEE
Q 042823 24 HYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVVM 103 (477)
Q Consensus 24 ~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~lv~ 103 (477)
+|.+++.||+|+||+||+|+++.+++.||+|++.+...........+.+|+.++..+ +||||+++++++.++..+|+||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~-~h~~iv~~~~~~~~~~~~~lv~ 80 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEA-DNEWVVRLYYSFQDKDNLYFVM 80 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhC-CCCcCCeEEEEEEeCCEEEEEE
Confidence 689999999999999999999999999999998764333334456788999999999 7999999999999999999999
Q ss_pred eccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCCC---
Q 042823 104 ELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEG--- 180 (477)
Q Consensus 104 e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~--- 180 (477)
|||+||+|.+++.+.+.+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++..+...
T Consensus 81 E~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~al~~lH~~~ivHrDlKp~NILl---~~~g~~kL~DFGla~~~~~~~~~ 157 (382)
T cd05625 81 DYIPGGDMMSLLIRMGIFPEDLARFYIAELTCAVESVHKMGFIHRDIKPDNILI---DRDGHIKLTDFGLCTGFRWTHDS 157 (382)
T ss_pred eCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE---CCCCCEEEeECCCCccccccccc
Confidence 999999999999888889999999999999999999999999999999999999 77889999999987532100
Q ss_pred ---------------------------------------------cceecccccccccchhhhhh-hcCCccchHhHHHH
Q 042823 181 ---------------------------------------------QVYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVI 214 (477)
Q Consensus 181 ---------------------------------------------~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~i 214 (477)
......+||+.|+|||++.+ .++.++|||||||+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvi 237 (382)
T cd05625 158 KYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVI 237 (382)
T ss_pred cccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEechHH
Confidence 00123479999999999864 68999999999999
Q ss_pred HHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCCCCHHHHHHHHHhcccCccccCC---HHHHhcCcccCcC
Q 042823 215 LYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRIT---AAQVLEHPWLRES 286 (477)
Q Consensus 215 l~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s---~~~~l~h~~~~~~ 286 (477)
+|+|++|.+||.+.+.......+.........+....+++++.++|.+|+ .+|.+|++ +.++++||||+..
T Consensus 238 l~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~hp~f~~~ 311 (382)
T cd05625 238 LYEMLVGQPPFLAQTPLETQMKVINWQTSLHIPPQAKLSPEASDLIIKLC-RGPEDRLGKNGADEIKAHPFFKTI 311 (382)
T ss_pred HHHHHhCCCCCCCCCHHHHHHHHHccCCCcCCCCcccCCHHHHHHHHHHc-cCHhHcCCCCCHHHHhcCCCcCCc
Confidence 99999999999988777776666665444444445678999999999987 59999997 9999999999764
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an |
| >cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-48 Score=387.92 Aligned_cols=259 Identities=31% Similarity=0.459 Sum_probs=219.6
Q ss_pred cccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEE
Q 042823 24 HYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVVM 103 (477)
Q Consensus 24 ~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~lv~ 103 (477)
.|.+++.||+|+||+||+|.++.+++.||+|++.+...........+.+|+.++..+ +||||+++++++.+...+|+||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l-~h~~iv~l~~~~~~~~~~~lv~ 80 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEA-DNEWVVKLYYSFQDKDNLYFVM 80 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhc-CCCCeeeeEEEEecCCEEEEEE
Confidence 688999999999999999999999999999999765443444556788999999998 7999999999999999999999
Q ss_pred eccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCCCc--
Q 042823 104 ELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQ-- 181 (477)
Q Consensus 104 e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~-- 181 (477)
|||+||+|.+++.+.+.+++..++.++.||+.||.|||+.||+||||||+|||+ +..+.+||+|||++..+....
T Consensus 81 E~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~aL~~LH~~givHrDlKp~Nili---~~~~~~kL~DFGl~~~~~~~~~~ 157 (381)
T cd05626 81 DYIPGGDMMSLLIRMEVFPEVLARFYIAELTLAIESVHKMGFIHRDIKPDNILI---DLDGHIKLTDFGLCTGFRWTHNS 157 (381)
T ss_pred ecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCcHHHEEE---CCCCCEEEeeCcCCccccccccc
Confidence 999999999999998889999999999999999999999999999999999999 678899999999875321000
Q ss_pred ----------------------------------------------ceecccccccccchhhhhh-hcCCccchHhHHHH
Q 042823 182 ----------------------------------------------VYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVI 214 (477)
Q Consensus 182 ----------------------------------------------~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~i 214 (477)
.....+||+.|+|||++.+ .++.++|||||||+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG~i 237 (381)
T cd05626 158 KYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGVI 237 (381)
T ss_pred ccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeehhhH
Confidence 0123579999999999864 58999999999999
Q ss_pred HHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCCCCHHHHHHHHHhcc--cCccccCCHHHHhcCcccCcC
Q 042823 215 LYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLT--KDPKRRITAAQVLEHPWLRES 286 (477)
Q Consensus 215 l~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~--~dp~~R~s~~~~l~h~~~~~~ 286 (477)
+|+|++|.+||...+.......+.........+.+..+++++++||.+|+. .+|..|+++.++++||||...
T Consensus 238 l~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~dli~~ll~~~~~~~~R~~~~~~l~hp~f~~~ 311 (381)
T cd05626 238 LFEMLVGQPPFLAPTPTETQLKVINWENTLHIPPQVKLSPEAVDLITKLCCSAEERLGRNGADDIKAHPFFSEV 311 (381)
T ss_pred HHHHHhCCCCCcCCCHHHHHHHHHccccccCCCCCCCCCHHHHHHHHHHccCcccccCCCCHHHHhcCcccCCC
Confidence 999999999998877766666665443333333445689999999999654 455569999999999999764
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po |
| >cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-49 Score=388.98 Aligned_cols=259 Identities=29% Similarity=0.495 Sum_probs=219.4
Q ss_pred ccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 042823 23 LHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVV 102 (477)
Q Consensus 23 ~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~lv 102 (477)
++|.+++.||+|+||.||+|.++.+++.||+|++.+...........+.+|+.++..+ +||||+++++++.+...+|+|
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~iv~~~~~~~~~~~~~lv 79 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAES-DSPWVVSLYYSFQDAQYLYLI 79 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhC-CCCCcceEEEEEEcCCeeEEE
Confidence 4799999999999999999999999999999998754333334456788899999998 799999999999999999999
Q ss_pred EeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCCCc-
Q 042823 103 MELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQ- 181 (477)
Q Consensus 103 ~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~- 181 (477)
||||+||+|.+++...+.+++..++.++.|++.||.|||++||+||||||+||++ +.++.+||+|||++..+....
T Consensus 80 ~E~~~gg~L~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NIll---~~~~~~kl~DfGla~~~~~~~~ 156 (377)
T cd05629 80 MEFLPGGDLMTMLIKYDTFSEDVTRFYMAECVLAIEAVHKLGFIHRDIKPDNILI---DRGGHIKLSDFGLSTGFHKQHD 156 (377)
T ss_pred EeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEE---CCCCCEEEeecccccccccccc
Confidence 9999999999999988889999999999999999999999999999999999999 678899999999985321100
Q ss_pred -----------------------------------------------ceecccccccccchhhhhh-hcCCccchHhHHH
Q 042823 182 -----------------------------------------------VYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGV 213 (477)
Q Consensus 182 -----------------------------------------------~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~ 213 (477)
.....+||+.|+|||++.+ .++.++|||||||
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGv 236 (377)
T cd05629 157 SAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSLGA 236 (377)
T ss_pred cccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeEecch
Confidence 0012469999999999864 5899999999999
Q ss_pred HHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCCCCHHHHHHHHHhcccCcccc---CCHHHHhcCcccCcC
Q 042823 214 ILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKDPKRR---ITAAQVLEHPWLRES 286 (477)
Q Consensus 214 il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R---~s~~~~l~h~~~~~~ 286 (477)
++|+|++|.+||........+..+.........+....++.++++||.+||. +|.+| +|+.++++||||+..
T Consensus 237 il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dli~~lL~-~~~~r~~r~~~~~~l~hp~~~~~ 311 (377)
T cd05629 237 IMFECLIGWPPFCSENSHETYRKIINWRETLYFPDDIHLSVEAEDLIRRLIT-NAENRLGRGGAHEIKSHPFFRGV 311 (377)
T ss_pred hhhhhhcCCCCCCCCCHHHHHHHHHccCCccCCCCCCCCCHHHHHHHHHHhc-CHhhcCCCCCHHHHhcCCCcCCC
Confidence 9999999999998887777777776543333222334578999999999998 77775 599999999999753
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of |
| >cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-49 Score=389.68 Aligned_cols=259 Identities=31% Similarity=0.475 Sum_probs=221.4
Q ss_pred ccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 042823 23 LHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVV 102 (477)
Q Consensus 23 ~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~lv 102 (477)
.+|++++.||+|+||.||+|.++.+++.||+|++.+...........+.+|+.++..+ +||||+++++.+.+++.+|+|
T Consensus 1 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l-~h~~iv~~~~~~~~~~~~~lv 79 (376)
T cd05598 1 SMFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEA-DNEWVVKLYYSFQDKDNLYFV 79 (376)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhC-CCCCcceEEEEEEcCCEEEEE
Confidence 3799999999999999999999999999999998654322223456678899999999 799999999999999999999
Q ss_pred EeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCCC--
Q 042823 103 MELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEG-- 180 (477)
Q Consensus 103 ~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~-- 180 (477)
||||+||+|.+++...+.+++..++.++.||+.||.|||++||+||||||+||++ +..+.+||+|||+|..+...
T Consensus 80 ~E~~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill---~~~~~ikL~DFG~a~~~~~~~~ 156 (376)
T cd05598 80 MDYIPGGDMMSLLIRLGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILI---DRDGHIKLTDFGLCTGFRWTHD 156 (376)
T ss_pred EeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHEEE---CCCCCEEEEeCCCCcccccccc
Confidence 9999999999999998889999999999999999999999999999999999999 77889999999987532100
Q ss_pred ------------------------------------------cceecccccccccchhhhhh-hcCCccchHhHHHHHHH
Q 042823 181 ------------------------------------------QVYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYI 217 (477)
Q Consensus 181 ------------------------------------------~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ 217 (477)
......+||+.|+|||++.+ .++.++|||||||++|+
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilye 236 (376)
T cd05598 157 SKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYE 236 (376)
T ss_pred ccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccceeee
Confidence 00113479999999999865 58999999999999999
Q ss_pred HhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCCCCHHHHHHHHHhcccCccccC---CHHHHhcCcccCcC
Q 042823 218 LLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRI---TAAQVLEHPWLRES 286 (477)
Q Consensus 218 l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~---s~~~~l~h~~~~~~ 286 (477)
|++|.+||.+.........+.........+.+..+++++.++|.+|+ .+|.+|+ |+.++++||||+..
T Consensus 237 ll~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~l~-~~p~~R~~~~t~~ell~h~~~~~~ 307 (376)
T cd05598 237 MLVGQPPFLADTPAETQLKVINWETTLHIPSQAKLSREASDLILRLC-CGAEDRLGKNGADEIKAHPFFKGI 307 (376)
T ss_pred hhhCCCCCCCCCHHHHHHHHhccCccccCCCCCCCCHHHHHHHHHHh-cCHhhcCCCCCHHHHhCCCCcCCC
Confidence 99999999988777766666655444444445578999999999987 5999999 99999999999864
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. |
| >KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-49 Score=362.66 Aligned_cols=260 Identities=28% Similarity=0.482 Sum_probs=219.8
Q ss_pred cccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeC-
Q 042823 18 YEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDE- 96 (477)
Q Consensus 18 ~~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~- 96 (477)
.+...-.|.-.+.+|.|+||.||.|....+++.||||.+....... .+|+++++.+ +|||||++.-+|...
T Consensus 19 ~~~~~i~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r~k-------nrEl~im~~l-~HpNIV~L~~~f~~~~ 90 (364)
T KOG0658|consen 19 GKKVEISYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKRYK-------NRELQIMRKL-DHPNIVRLLYFFSSST 90 (364)
T ss_pred CcceEEEEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCCcC-------cHHHHHHHhc-CCcCeeeEEEEEEecC
Confidence 3445667888999999999999999999999999999987654433 3688898877 899999999888532
Q ss_pred ----CeEEEEEeccCCCchHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEE
Q 042823 97 ----TAVHVVMELCEGGDLFDRIIA----KGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKV 168 (477)
Q Consensus 97 ----~~~~lv~e~~~gg~L~~~l~~----~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl 168 (477)
-+..+||||++. +|.++++. +..++.-.++-+.+||++||.|||+.||+||||||+|+|+ +...+.+||
T Consensus 91 ~~d~~~lnlVleymP~-tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~IcHRDIKPqNlLv--D~~tg~LKi 167 (364)
T KOG0658|consen 91 ESDEVYLNLVLEYMPE-TLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHGICHRDIKPQNLLV--DPDTGVLKI 167 (364)
T ss_pred CCchhHHHHHHHhchH-HHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcCcccCCCChheEEE--cCCCCeEEe
Confidence 246799999986 99999885 5778999999999999999999999999999999999988 235589999
Q ss_pred eecCCccccCCCcceecccccccccchhhhhh--hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCC-----
Q 042823 169 TDFGSALLFEEGQVYRDIVGSGFYIAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGE----- 241 (477)
Q Consensus 169 ~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~----- 241 (477)
||||.|+....+....+...|.+|+|||.+.+ .|+.+.||||.||++.||+-|++.|.+.+...++..|.+--
T Consensus 168 cDFGSAK~L~~~epniSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~lG~Pt~ 247 (364)
T KOG0658|consen 168 CDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKVLGTPTR 247 (364)
T ss_pred ccCCcceeeccCCCceeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHHhCCCCH
Confidence 99999999988777778889999999999875 69999999999999999999999999988877776665411
Q ss_pred -------c--------cCCCCC-----CCCCCHHHHHHHHHhcccCccccCCHHHHhcCcccCcCCC
Q 042823 242 -------I--------DFDTDP-----WPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGE 288 (477)
Q Consensus 242 -------~--------~~~~~~-----~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~~~ 288 (477)
. .+...+ ....++++.+|+.++|..+|.+|.++.|++.||||..-..
T Consensus 248 e~I~~mn~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h~fFdelr~ 314 (364)
T KOG0658|consen 248 EDIKSMNPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALAHPFFDELRD 314 (364)
T ss_pred HHHhhcCcccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhcchhhHHhhC
Confidence 0 011111 2357899999999999999999999999999999976543
|
|
| >cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-48 Score=385.57 Aligned_cols=261 Identities=31% Similarity=0.507 Sum_probs=224.3
Q ss_pred ccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEE
Q 042823 21 VMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVH 100 (477)
Q Consensus 21 ~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~ 100 (477)
-.++|++.+.||+|+||.||+|.++.+++.||+|++.+...........+.+|+.++..+ +||||+++++++.++..+|
T Consensus 41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~-~h~~iv~~~~~~~~~~~~~ 119 (370)
T cd05596 41 KAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHA-NSEWIVQLHYAFQDDKYLY 119 (370)
T ss_pred CHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhC-CCCCcceEEEEEecCCEEE
Confidence 346799999999999999999999999999999999754322233345577899998888 7999999999999999999
Q ss_pred EEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCCC
Q 042823 101 VVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEG 180 (477)
Q Consensus 101 lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~ 180 (477)
+|||||+||+|.+++.. ..+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++......
T Consensus 120 lv~Ey~~gg~L~~~l~~-~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl---~~~~~~kL~DfG~~~~~~~~ 195 (370)
T cd05596 120 MVMEYMPGGDLVNLMSN-YDIPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLL---DKSGHLKLADFGTCMKMDAN 195 (370)
T ss_pred EEEcCCCCCcHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEE---cCCCCEEEEeccceeeccCC
Confidence 99999999999988765 458999999999999999999999999999999999999 77889999999998765433
Q ss_pred c--ceecccccccccchhhhhh-----hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCCCC
Q 042823 181 Q--VYRDIVGSGFYIAPEVLRR-----RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSIS 253 (477)
Q Consensus 181 ~--~~~~~~gt~~y~aPE~~~~-----~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 253 (477)
. .....+||+.|+|||++.+ .++.++|||||||++|+|++|.+||.+.+....+..+.........+..+.+|
T Consensus 196 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s 275 (370)
T cd05596 196 GMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMDHKNSLTFPDDIEIS 275 (370)
T ss_pred CcccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHHHHHHHHHcCCCcCCCCCcCCCC
Confidence 2 2234679999999999853 37889999999999999999999999988888888887755444434445689
Q ss_pred HHHHHHHHHhcccCccc--cCCHHHHhcCcccCcC
Q 042823 254 STAKDLVRRMLTKDPKR--RITAAQVLEHPWLRES 286 (477)
Q Consensus 254 ~~~~~li~~~l~~dp~~--R~s~~~~l~h~~~~~~ 286 (477)
.++++||.+||+.+|.+ |+|+.++++||||+..
T Consensus 276 ~~~~~li~~~L~~~p~r~~R~s~~ell~h~~~~~~ 310 (370)
T cd05596 276 KQAKDLICAFLTDREVRLGRNGVDEIKSHPFFKND 310 (370)
T ss_pred HHHHHHHHHHccChhhccCCCCHHHHhcCcccCCC
Confidence 99999999999999988 9999999999999864
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in |
| >cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-48 Score=377.79 Aligned_cols=251 Identities=30% Similarity=0.513 Sum_probs=218.5
Q ss_pred ccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEeccCC
Q 042823 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVVMELCEG 108 (477)
Q Consensus 29 ~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~lv~e~~~g 108 (477)
+.||+|+||+||+|.++.+++.||+|++.+..............|..++..+.+||||+++++++...+.+|+|||||+|
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~ 80 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNG 80 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCC
Confidence 46999999999999999999999999987543222234456677888888776899999999999999999999999999
Q ss_pred CchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccC-CCcceeccc
Q 042823 109 GDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFE-EGQVYRDIV 187 (477)
Q Consensus 109 g~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~-~~~~~~~~~ 187 (477)
|+|.+++...+.+++..+..++.|++.||.|||++||+||||||+||++ +.++.+||+|||++.... .........
T Consensus 81 g~L~~~i~~~~~l~~~~~~~~~~ql~~~L~~lH~~~ivH~dlkp~NIli---~~~~~~kL~DfG~~~~~~~~~~~~~~~~ 157 (320)
T cd05590 81 GDLMFHIQKSRRFDEARARFYAAEITSALMFLHDKGIIYRDLKLDNVLL---DHEGHCKLADFGMCKEGIFNGKTTSTFC 157 (320)
T ss_pred chHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEE---CCCCcEEEeeCCCCeecCcCCCcccccc
Confidence 9999999988899999999999999999999999999999999999999 778899999999987532 222334567
Q ss_pred ccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCCCCHHHHHHHHHhccc
Q 042823 188 GSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTK 266 (477)
Q Consensus 188 gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~ 266 (477)
||+.|+|||++.+ .++.++|||||||++|+|++|..||...+....+..+..+...++ +.++++++++|++||+.
T Consensus 158 gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~----~~~~~~~~~li~~~L~~ 233 (320)
T cd05590 158 GTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVYP----TWLSQDAVDILKAFMTK 233 (320)
T ss_pred cCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHhcCCCCCC----CCCCHHHHHHHHHHccc
Confidence 9999999999875 588999999999999999999999998888888888877655433 35789999999999999
Q ss_pred CccccCCH------HHHhcCcccCcC
Q 042823 267 DPKRRITA------AQVLEHPWLRES 286 (477)
Q Consensus 267 dp~~R~s~------~~~l~h~~~~~~ 286 (477)
||.+||++ .++++||||...
T Consensus 234 dP~~R~~~~~~~~~~~~~~h~~f~~~ 259 (320)
T cd05590 234 NPTMRLGSLTLGGEEAILRHPFFKEL 259 (320)
T ss_pred CHHHCCCCCCCCCHHHHHcCCCcCCC
Confidence 99999998 999999999754
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal |
| >cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-48 Score=377.70 Aligned_cols=250 Identities=29% Similarity=0.516 Sum_probs=218.2
Q ss_pred ccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEeccCC
Q 042823 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVVMELCEG 108 (477)
Q Consensus 29 ~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~lv~e~~~g 108 (477)
+.||+|+||.||+|.++.+++.||+|++.+...........+.+|++++..+ +||||+++++++...+.+|+||||++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~~lv~Ey~~~ 79 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNT-RHPFLTSLKYSFQTKDRLCFVMEYVNG 79 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhC-CCCCCcceEEEEEcCCEEEEEEeCCCC
Confidence 4699999999999999999999999999765433334456778899999988 799999999999999999999999999
Q ss_pred CchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCC-Ccceeccc
Q 042823 109 GDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEE-GQVYRDIV 187 (477)
Q Consensus 109 g~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~-~~~~~~~~ 187 (477)
|+|.+++...+.+++.++..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++..... ........
T Consensus 80 g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~NIll---~~~~~~kL~DfG~~~~~~~~~~~~~~~~ 156 (328)
T cd05593 80 GELFFHLSRERVFSEDRTRFYGAEIVSALDYLHSGKIVYRDLKLENLML---DKDGHIKITDFGLCKEGITDAATMKTFC 156 (328)
T ss_pred CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeEE---CCCCcEEEecCcCCccCCCccccccccc
Confidence 9999999888889999999999999999999999999999999999999 7788999999999875322 22234467
Q ss_pred ccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCCCCHHHHHHHHHhccc
Q 042823 188 GSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTK 266 (477)
Q Consensus 188 gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~ 266 (477)
||+.|+|||++.+ .++.++|||||||++|+|++|..||...........+......++ ..+++++.+||.+||..
T Consensus 157 gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~p----~~~~~~~~~li~~~L~~ 232 (328)
T cd05593 157 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEDIKFP----RTLSADAKSLLSGLLIK 232 (328)
T ss_pred CCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHHHHHHHhccCCccCC----CCCCHHHHHHHHHHcCC
Confidence 9999999999864 689999999999999999999999988777777766666554443 36799999999999999
Q ss_pred CccccC-----CHHHHhcCcccCcC
Q 042823 267 DPKRRI-----TAAQVLEHPWLRES 286 (477)
Q Consensus 267 dp~~R~-----s~~~~l~h~~~~~~ 286 (477)
||++|+ ++.++++||||...
T Consensus 233 dP~~R~~~~~~~~~~il~h~~~~~~ 257 (328)
T cd05593 233 DPNKRLGGGPDDAKEIMRHSFFTGV 257 (328)
T ss_pred CHHHcCCCCCCCHHHHhcCCCcCCC
Confidence 999997 89999999999753
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate |
| >cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-48 Score=383.27 Aligned_cols=263 Identities=32% Similarity=0.538 Sum_probs=222.7
Q ss_pred ccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCe
Q 042823 19 EDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETA 98 (477)
Q Consensus 19 ~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~ 98 (477)
....++|++.+.||+|+||.||+|.++.+++.||+|++.+...........+.+|+.++..+ +||||+++++++.++..
T Consensus 39 ~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~-~hp~iv~~~~~~~~~~~ 117 (370)
T cd05621 39 QMKAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFA-NSPWVVQLFCAFQDDKY 117 (370)
T ss_pred CCCHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhC-CCCCEeeEEEEEEcCCE
Confidence 34457899999999999999999999999999999998754332333345677889988888 79999999999999999
Q ss_pred EEEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccC
Q 042823 99 VHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFE 178 (477)
Q Consensus 99 ~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~ 178 (477)
+|+|||||+||+|.+++... .+++..+..++.||+.||.|||++||+||||||+|||+ +..+.+||+|||++....
T Consensus 118 ~~lv~Ey~~gg~L~~~l~~~-~~~~~~~~~~~~qil~aL~~LH~~~IvHrDLKp~NILl---~~~~~~kL~DFG~a~~~~ 193 (370)
T cd05621 118 LYMVMEYMPGGDLVNLMSNY-DVPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLL---DKHGHLKLADFGTCMKMD 193 (370)
T ss_pred EEEEEcCCCCCcHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEE---CCCCCEEEEecccceecc
Confidence 99999999999999988654 58999999999999999999999999999999999999 778899999999998764
Q ss_pred CCcc--eecccccccccchhhhhh-----hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCC
Q 042823 179 EGQV--YRDIVGSGFYIAPEVLRR-----RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPS 251 (477)
Q Consensus 179 ~~~~--~~~~~gt~~y~aPE~~~~-----~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 251 (477)
.... ....+||+.|+|||++.+ .++.++||||+||++|+|++|.+||.+.+....+..+.........+....
T Consensus 194 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~ 273 (370)
T cd05621 194 ETGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHKNSLNFPEDVE 273 (370)
T ss_pred cCCceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHHHHHHHHHhCCcccCCCCccc
Confidence 3322 235679999999999864 278899999999999999999999998888777887776543333333346
Q ss_pred CCHHHHHHHHHhcccCccc--cCCHHHHhcCcccCcC
Q 042823 252 ISSTAKDLVRRMLTKDPKR--RITAAQVLEHPWLRES 286 (477)
Q Consensus 252 ~~~~~~~li~~~l~~dp~~--R~s~~~~l~h~~~~~~ 286 (477)
+++.+++++.+||..+|.+ |+|+.++++||||+..
T Consensus 274 ~s~~~~~li~~~L~~~~~r~~R~~~~e~l~hp~~~~~ 310 (370)
T cd05621 274 ISKHAKNLICAFLTDREVRLGRNGVEEIKQHPFFKND 310 (370)
T ss_pred CCHHHHHHHHHHccCchhccCCCCHHHHhcCcccCCC
Confidence 7999999999999865544 8999999999999764
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found |
| >KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-49 Score=370.23 Aligned_cols=263 Identities=33% Similarity=0.566 Sum_probs=239.5
Q ss_pred cccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCC
Q 042823 18 YEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDET 97 (477)
Q Consensus 18 ~~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~ 97 (477)
...|..-|.+.+.||+|.|++|-+|+|.-||.+||||++.+..... .....+.+|++-++.+ .|||||++|++.....
T Consensus 13 DgkIAGLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~-~st~hlfqEVRCMKLV-QHpNiVRLYEViDTQT 90 (864)
T KOG4717|consen 13 DGKIAGLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDT-LSTGHLFQEVRCMKLV-QHPNIVRLYEVIDTQT 90 (864)
T ss_pred ccceeeeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccch-hhhhHHHHHHHHHHHh-cCcCeeeeeehhcccc
Confidence 4567888999999999999999999999999999999998865433 4456778899988777 7999999999999999
Q ss_pred eEEEEEeccCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccc
Q 042823 98 AVHVVMELCEGGDLFDRIIAK-GYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALL 176 (477)
Q Consensus 98 ~~~lv~e~~~gg~L~~~l~~~-~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~ 176 (477)
.+|+|+|+-.||+|++||.+. ..+.|..+.+++.||+.|+.|||+..+|||||||+|+.|. .+-|.|||+|||++-.
T Consensus 91 KlyLiLELGD~GDl~DyImKHe~Gl~E~La~kYF~QI~~AI~YCHqLHVVHRDLKPENVVFF--EKlGlVKLTDFGFSNk 168 (864)
T KOG4717|consen 91 KLYLILELGDGGDLFDYIMKHEEGLNEDLAKKYFAQIVHAISYCHQLHVVHRDLKPENVVFF--EKLGLVKLTDFGFSNK 168 (864)
T ss_pred eEEEEEEecCCchHHHHHHhhhccccHHHHHHHHHHHHHHHHHHhhhhhhcccCCcceeEEe--eecCceEeeecccccc
Confidence 999999999999999999875 4689999999999999999999999999999999998775 5678999999999999
Q ss_pred cCCCcceecccccccccchhhhhhh-c-CCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCCCCH
Q 042823 177 FEEGQVYRDIVGSGFYIAPEVLRRR-Y-GKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISS 254 (477)
Q Consensus 177 ~~~~~~~~~~~gt~~y~aPE~~~~~-~-~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 254 (477)
+.++....+.+|+..|.|||++.|. | .+++||||||||||.|.+|++||...++.+.+..|+...+..+. .+|.
T Consensus 169 f~PG~kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSETLTmImDCKYtvPs----hvS~ 244 (864)
T KOG4717|consen 169 FQPGKKLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSETLTMIMDCKYTVPS----HVSK 244 (864)
T ss_pred CCCcchhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchhhhhhhhcccccCch----hhhH
Confidence 9999999999999999999999874 5 57899999999999999999999999999999999988777653 6899
Q ss_pred HHHHHHHHhcccCccccCCHHHHhcCcccCcCCC
Q 042823 255 TAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGE 288 (477)
Q Consensus 255 ~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~~~ 288 (477)
++++||..||..||.+|.|.+++..|+|++....
T Consensus 245 eCrdLI~sMLvRdPkkRAslEeI~s~~Wlq~~D~ 278 (864)
T KOG4717|consen 245 ECRDLIQSMLVRDPKKRASLEEIVSTSWLQAGDR 278 (864)
T ss_pred HHHHHHHHHHhcCchhhccHHHHhccccccCCCC
Confidence 9999999999999999999999999999987654
|
|
| >cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.7e-49 Score=384.72 Aligned_cols=259 Identities=34% Similarity=0.585 Sum_probs=225.0
Q ss_pred ccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 042823 23 LHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVV 102 (477)
Q Consensus 23 ~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~lv 102 (477)
++|.+.+.||+|+||+||+|.+..+++.||+|++.+...........+.+|+.++..+ +||||+++++++.+++.+|+|
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~~~~~~lv 79 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADA-DSPWIVKLYYSFQDEEHLYLV 79 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhc-CCCCccchhhheecCCeEEEE
Confidence 4799999999999999999999999999999999764333334456788899999999 699999999999999999999
Q ss_pred EeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCCCc-
Q 042823 103 MELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQ- 181 (477)
Q Consensus 103 ~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~- 181 (477)
|||++||+|.+++.+.+.+++..++.++.||+.||.|||++||+||||||+||++ +.++.+||+|||++.......
T Consensus 80 ~e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~giiH~Dlkp~NIll---~~~~~~kL~Dfg~~~~~~~~~~ 156 (350)
T cd05573 80 MEYMPGGDLMNLLIRKDVFPEETARFYIAELVLALDSVHKLGFIHRDIKPDNILI---DADGHIKLADFGLCKKMNKAKD 156 (350)
T ss_pred EcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEE---CCCCCEEeecCCCCccCcccCc
Confidence 9999999999999988889999999999999999999999999999999999999 778899999999987654332
Q ss_pred -----------------------------ceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChh
Q 042823 182 -----------------------------VYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKK 231 (477)
Q Consensus 182 -----------------------------~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~ 231 (477)
......||+.|+|||++.+ .++.++|||||||++|+|++|..||......
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~ 236 (350)
T cd05573 157 REYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDTLQ 236 (350)
T ss_pred ccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCCCHH
Confidence 2234579999999999875 5899999999999999999999999988877
Q ss_pred hHHHHHHcCCccCCCCCCCCCCHHHHHHHHHhcccCccccCC-HHHHhcCcccCcC
Q 042823 232 GTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRIT-AAQVLEHPWLRES 286 (477)
Q Consensus 232 ~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s-~~~~l~h~~~~~~ 286 (477)
.....+.........+..+.+++++.+||.+||. ||.+||+ +.++++||||+..
T Consensus 237 ~~~~~i~~~~~~~~~p~~~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~hp~~~~~ 291 (350)
T cd05573 237 ETYNKIINWKESLRFPPDPPVSPEAIDLICRLLC-DPEDRLGSFEEIKSHPFFKGI 291 (350)
T ss_pred HHHHHHhccCCcccCCCCCCCCHHHHHHHHHHcc-ChhhcCCCHHHHhcCCCcCCC
Confidence 7777777633333333334579999999999997 9999999 9999999999764
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the |
| >cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-48 Score=376.24 Aligned_cols=256 Identities=29% Similarity=0.499 Sum_probs=222.5
Q ss_pred cccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEE
Q 042823 24 HYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVVM 103 (477)
Q Consensus 24 ~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~lv~ 103 (477)
+|++.+.||+|+||.||+|.++.+++.||+|++.+...........+..|..++..+.+|++|+++++++...+.+|+||
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM 80 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEE
Confidence 58899999999999999999999999999999876433233345567788888888865677999999999999999999
Q ss_pred eccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccC-CCcc
Q 042823 104 ELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFE-EGQV 182 (477)
Q Consensus 104 e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~-~~~~ 182 (477)
|||+||+|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++.... ....
T Consensus 81 E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill---~~~~~~kL~Dfg~~~~~~~~~~~ 157 (324)
T cd05587 81 EYVNGGDLMYHIQQVGKFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVML---DAEGHIKIADFGMCKENIFGGKT 157 (324)
T ss_pred cCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEE---cCCCCEEEeecCcceecCCCCCc
Confidence 999999999999888889999999999999999999999999999999999999 678899999999886432 2223
Q ss_pred eecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCCCCHHHHHHHH
Q 042823 183 YRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVR 261 (477)
Q Consensus 183 ~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~ 261 (477)
....+||+.|+|||++.+ .++.++||||+||++|+|+||++||.+.........+......++ ..+++++.+++.
T Consensus 158 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~~~~~~----~~~~~~~~~li~ 233 (324)
T cd05587 158 TRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYP----KSLSKEAVSICK 233 (324)
T ss_pred eeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCC----CCCCHHHHHHHH
Confidence 345679999999999875 589999999999999999999999998888888888877655443 357899999999
Q ss_pred HhcccCccccCCH-----HHHhcCcccCcC
Q 042823 262 RMLTKDPKRRITA-----AQVLEHPWLRES 286 (477)
Q Consensus 262 ~~l~~dp~~R~s~-----~~~l~h~~~~~~ 286 (477)
+||..||.+|+++ .++++||||...
T Consensus 234 ~~l~~~P~~R~~~~~~~~~~~~~hp~~~~~ 263 (324)
T cd05587 234 GLLTKHPAKRLGCGPTGERDIREHAFFRRI 263 (324)
T ss_pred HHhhcCHHHcCCCCCCCHHHHhcCCCcCCC
Confidence 9999999999986 899999999764
|
Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory |
| >cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-48 Score=370.47 Aligned_cols=255 Identities=26% Similarity=0.411 Sum_probs=211.8
Q ss_pred cccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEE
Q 042823 22 MLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHV 101 (477)
Q Consensus 22 ~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~l 101 (477)
.++|++.+.||+|+||.||+|.++.+++.||+|++...... .....+.+|+.++..+ +||||+++++++......|+
T Consensus 4 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~l 80 (288)
T cd07871 4 LETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEE--GAPCTAIREVSLLKNL-KHANIVTLHDIIHTERCLTL 80 (288)
T ss_pred cccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccC--CcchhHHHHHHHHHhC-CCCCEeeEEEEEcCCCeEEE
Confidence 35799999999999999999999999999999998654321 2234567899999999 79999999999999999999
Q ss_pred EEeccCCCchHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCCC
Q 042823 102 VMELCEGGDLFDRIIAKG-YNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEG 180 (477)
Q Consensus 102 v~e~~~gg~L~~~l~~~~-~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~ 180 (477)
||||++| +|.+++...+ .+++..+..++.||+.||.|||++||+||||||+||++ +.++.+||+|||++......
T Consensus 81 v~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nil~---~~~~~~kl~DfG~~~~~~~~ 156 (288)
T cd07871 81 VFEYLDS-DLKQYLDNCGNLMSMHNVKIFMFQLLRGLSYCHKRKILHRDLKPQNLLI---NEKGELKLADFGLARAKSVP 156 (288)
T ss_pred EEeCCCc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEE---CCCCCEEECcCcceeeccCC
Confidence 9999975 9999887654 47899999999999999999999999999999999999 77788999999998754322
Q ss_pred -cceecccccccccchhhhhh--hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCcc--------------
Q 042823 181 -QVYRDIVGSGFYIAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEID-------------- 243 (477)
Q Consensus 181 -~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~-------------- 243 (477)
.......|++.|+|||++.+ .++.++||||+||++|+|+||.+||.+.+..+....+.+....
T Consensus 157 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (288)
T cd07871 157 TKTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGITSNEE 236 (288)
T ss_pred CccccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhccccchh
Confidence 22334578999999999864 5889999999999999999999999887766555444321110
Q ss_pred -----CCC-------CCCCCCCHHHHHHHHHhcccCccccCCHHHHhcCccc
Q 042823 244 -----FDT-------DPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWL 283 (477)
Q Consensus 244 -----~~~-------~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~ 283 (477)
++. ...+.+++++++||++||+.||.+|||+.|+|+||||
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~hp~f 288 (288)
T cd07871 237 FRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALRHSYF 288 (288)
T ss_pred hhccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcCCCC
Confidence 000 0123568899999999999999999999999999997
|
Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament |
| >cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-48 Score=375.39 Aligned_cols=251 Identities=27% Similarity=0.498 Sum_probs=219.2
Q ss_pred ccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEeccCC
Q 042823 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVVMELCEG 108 (477)
Q Consensus 29 ~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~lv~e~~~g 108 (477)
+.||+|+||.||+|.++.+++.||+|++.+...........+..|..++..+.+||||+++++++..++.+|+|||||+|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~ 80 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNG 80 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCC
Confidence 46999999999999999999999999987643333334456677888888777899999999999999999999999999
Q ss_pred CchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccC-CCcceeccc
Q 042823 109 GDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFE-EGQVYRDIV 187 (477)
Q Consensus 109 g~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~-~~~~~~~~~ 187 (477)
|+|..++...+.+++..+..++.||+.||.|||++||+||||||+||++ +.++.+||+|||++.... .........
T Consensus 81 ~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~Nill---~~~~~~kL~Dfg~~~~~~~~~~~~~~~~ 157 (321)
T cd05591 81 GDLMFQIQRSRKFDEPRSRFYAAEVTLALMFLHRHGVIYRDLKLDNILL---DAEGHCKLADFGMCKEGILNGVTTTTFC 157 (321)
T ss_pred CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEE---CCCCCEEEeecccceecccCCccccccc
Confidence 9999999988889999999999999999999999999999999999999 778899999999987542 222334567
Q ss_pred ccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCCCCHHHHHHHHHhccc
Q 042823 188 GSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTK 266 (477)
Q Consensus 188 gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~ 266 (477)
||+.|+|||++.+ .++.++|||||||++|+|++|.+||...+....+..+..+...++ ..++.++.++|.+||+.
T Consensus 158 gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~p----~~~~~~~~~ll~~~L~~ 233 (321)
T cd05591 158 GTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNEDDLFESILHDDVLYP----VWLSKEAVSILKAFMTK 233 (321)
T ss_pred cCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCC----CCCCHHHHHHHHHHhcc
Confidence 9999999999875 689999999999999999999999999888888888887665443 24789999999999999
Q ss_pred CccccC-------CHHHHhcCcccCcC
Q 042823 267 DPKRRI-------TAAQVLEHPWLRES 286 (477)
Q Consensus 267 dp~~R~-------s~~~~l~h~~~~~~ 286 (477)
||++|| ++.++++||||...
T Consensus 234 dp~~R~~~~~~~~~~~~~~~hp~~~~~ 260 (321)
T cd05591 234 NPNKRLGCVASQGGEDAIKQHPFFKEI 260 (321)
T ss_pred CHHHcCCCCCCCCCHHHHhcCCccCCC
Confidence 999999 99999999999653
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to |
| >cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-48 Score=375.94 Aligned_cols=250 Identities=32% Similarity=0.536 Sum_probs=218.3
Q ss_pred ccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEeccCC
Q 042823 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVVMELCEG 108 (477)
Q Consensus 29 ~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~lv~e~~~g 108 (477)
+.||+|+||.||+|.++.+|+.||+|++.+...........+.+|+.++..+ +||||+++++++.....+|+||||++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~i~~~~~~~~~~~~~~lv~E~~~~ 79 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNT-RHPFLTALKYAFQTHDRLCFVMEYANG 79 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhC-CCCCCcceeeEEecCCEEEEEEeCCCC
Confidence 4699999999999999999999999999764333333455677899999999 799999999999999999999999999
Q ss_pred CchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccC-CCcceeccc
Q 042823 109 GDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFE-EGQVYRDIV 187 (477)
Q Consensus 109 g~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~-~~~~~~~~~ 187 (477)
|+|..++...+.+++..++.++.||+.||.|||++||+||||||+||++ +.++.+||+|||++.... .........
T Consensus 80 ~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll---~~~~~~kL~Dfg~~~~~~~~~~~~~~~~ 156 (323)
T cd05595 80 GELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLML---DKDGHIKITDFGLCKEGISDGATMKTFC 156 (323)
T ss_pred CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEE---cCCCCEEecccHHhccccCCCCcccccc
Confidence 9999999888889999999999999999999999999999999999999 778899999999887532 222334567
Q ss_pred ccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCCCCHHHHHHHHHhccc
Q 042823 188 GSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTK 266 (477)
Q Consensus 188 gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~ 266 (477)
||+.|+|||++.+ .++.++|||||||++|+|++|..||...+.......+......++ ..++++++++|.+||+.
T Consensus 157 gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~p----~~~~~~~~~li~~~L~~ 232 (323)
T cd05595 157 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFP----RTLSPEAKSLLAGLLKK 232 (323)
T ss_pred CCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCC----CCCCHHHHHHHHHHccC
Confidence 9999999999864 689999999999999999999999988877777777766555443 36799999999999999
Q ss_pred CccccC-----CHHHHhcCcccCcC
Q 042823 267 DPKRRI-----TAAQVLEHPWLRES 286 (477)
Q Consensus 267 dp~~R~-----s~~~~l~h~~~~~~ 286 (477)
||.+|| ++.++++||||...
T Consensus 233 dP~~R~~~~~~~~~~~l~h~~~~~~ 257 (323)
T cd05595 233 DPKQRLGGGPSDAKEVMEHRFFLSI 257 (323)
T ss_pred CHHHhCCCCCCCHHHHHcCCCcCCC
Confidence 999998 99999999999764
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in |
| >cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-48 Score=382.32 Aligned_cols=259 Identities=31% Similarity=0.506 Sum_probs=221.0
Q ss_pred ccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 042823 23 LHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVV 102 (477)
Q Consensus 23 ~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~lv 102 (477)
+.|++.+.||+|+||.||+|.++.+++.||+|++.+...........+.+|+.++..+ +||||+++++.+.+.+.+|+|
T Consensus 1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~iv~~~~~~~~~~~~~lv 79 (360)
T cd05627 1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEA-DGAWVVKMFYSFQDKRNLYLI 79 (360)
T ss_pred CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhC-CCCCEeeEEEEEEcCCEEEEE
Confidence 4689999999999999999999999999999999754332334456778899999998 799999999999999999999
Q ss_pred EeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCCCc-
Q 042823 103 MELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQ- 181 (477)
Q Consensus 103 ~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~- 181 (477)
||||+||+|.+++.+.+.+++..+..++.|++.||.|||++||+||||||+||++ +..+.+||+|||++.......
T Consensus 80 ~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~~L~~lH~~givHrDLkp~NIli---~~~~~vkL~DfG~~~~~~~~~~ 156 (360)
T cd05627 80 MEFLPGGDMMTLLMKKDTLSEEATQFYIAETVLAIDAIHQLGFIHRDIKPDNLLL---DAKGHVKLSDFGLCTGLKKAHR 156 (360)
T ss_pred EeCCCCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEE---CCCCCEEEeeccCCcccccccc
Confidence 9999999999999988889999999999999999999999999999999999999 778899999999886432110
Q ss_pred -----------------------------------ceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCC
Q 042823 182 -----------------------------------VYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPF 225 (477)
Q Consensus 182 -----------------------------------~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf 225 (477)
.....+||+.|+|||++.+ .++.++|||||||++|+|++|.+||
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~Pf 236 (360)
T cd05627 157 TEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPF 236 (360)
T ss_pred cccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCCCCC
Confidence 0123579999999999865 5899999999999999999999999
Q ss_pred CCCChhhHHHHHHcCCccCCCCCCCCCCHHHHHHHHHhcccCccccC---CHHHHhcCcccCcC
Q 042823 226 WAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRI---TAAQVLEHPWLRES 286 (477)
Q Consensus 226 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~---s~~~~l~h~~~~~~ 286 (477)
...+.......+.........+....++++++++|.+|+. ||.+|+ ++.++++||||...
T Consensus 237 ~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~~-~p~~R~~~~~~~ei~~hp~f~~~ 299 (360)
T cd05627 237 CSETPQETYRKVMNWKETLVFPPEVPISEKAKDLILRFCT-DSENRIGSNGVEEIKSHPFFEGV 299 (360)
T ss_pred CCCCHHHHHHHHHcCCCceecCCCCCCCHHHHHHHHHhcc-ChhhcCCCCCHHHHhcCCCCCCC
Confidence 9888877777777543322222233579999999999874 999998 48999999999864
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul |
| >cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-48 Score=374.08 Aligned_cols=256 Identities=28% Similarity=0.475 Sum_probs=223.2
Q ss_pred cccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEE
Q 042823 24 HYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVVM 103 (477)
Q Consensus 24 ~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~lv~ 103 (477)
+|.+.+.||+|+||.||+|.++.+++.||+|++.+..............|..++..+.+||+|+++++++.+.+.+|+||
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVM 80 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEE
Confidence 58899999999999999999999999999999976543333344556678888877777999999999999999999999
Q ss_pred eccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCC-Ccc
Q 042823 104 ELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEE-GQV 182 (477)
Q Consensus 104 e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~-~~~ 182 (477)
||++||+|.+++...+.+++.++..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++..... ...
T Consensus 81 E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill---~~~~~~kL~DfG~~~~~~~~~~~ 157 (323)
T cd05616 81 EYVNGGDLMYQIQQVGRFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVML---DSEGHIKIADFGMCKENMWDGVT 157 (323)
T ss_pred cCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEecCCCHHHeEE---CCCCcEEEccCCCceecCCCCCc
Confidence 999999999999888889999999999999999999999999999999999999 7788999999999875432 223
Q ss_pred eecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCCCCHHHHHHHH
Q 042823 183 YRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVR 261 (477)
Q Consensus 183 ~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~ 261 (477)
.....||+.|+|||++.+ .++.++|||||||++|+|+||.+||.+.........+......++ ..+++++.+++.
T Consensus 158 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~~~~~~i~~~~~~~p----~~~s~~~~~li~ 233 (323)
T cd05616 158 TKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYP----KSMSKEAVAICK 233 (323)
T ss_pred cccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCC----CcCCHHHHHHHH
Confidence 345679999999999875 589999999999999999999999998888888888877665443 357999999999
Q ss_pred HhcccCccccCCH-----HHHhcCcccCcC
Q 042823 262 RMLTKDPKRRITA-----AQVLEHPWLRES 286 (477)
Q Consensus 262 ~~l~~dp~~R~s~-----~~~l~h~~~~~~ 286 (477)
+||+.||++|+++ .++++||||+..
T Consensus 234 ~~l~~~p~~R~~~~~~~~~~i~~h~~~~~~ 263 (323)
T cd05616 234 GLMTKHPGKRLGCGPEGERDIKEHAFFRYI 263 (323)
T ss_pred HHcccCHHhcCCCCCCCHHHHhcCCCcCCC
Confidence 9999999999984 899999999753
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and |
| >cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-48 Score=378.93 Aligned_cols=259 Identities=31% Similarity=0.466 Sum_probs=222.9
Q ss_pred ccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 042823 23 LHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVV 102 (477)
Q Consensus 23 ~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~lv 102 (477)
++|.+.+.||+|+||.||+|.++.+++.||+|++.+...........+.+|+.++..+ +||||+++++++.+...+|+|
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~-~~~~i~~~~~~~~~~~~~~lv 79 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSIS-NSPWIPQLQYAFQDKDNLYLV 79 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhC-CCCCCcceeeEEecCCeEEEE
Confidence 4699999999999999999999999999999999765333333456678889988887 799999999999999999999
Q ss_pred EeccCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCCCc
Q 042823 103 MELCEGGDLFDRIIAK-GYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQ 181 (477)
Q Consensus 103 ~e~~~gg~L~~~l~~~-~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~ 181 (477)
|||++||+|.+++.+. +.+++..+..++.||+.||.|||++||+||||||+||++ +..+.+||+|||++.......
T Consensus 80 ~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~i~H~Dlkp~NIll---~~~~~~kL~Dfg~a~~~~~~~ 156 (330)
T cd05601 80 MEYQPGGDLLSLLNRYEDQFDEDMAQFYLAELVLAIHSVHQMGYVHRDIKPENVLI---DRTGHIKLADFGSAARLTANK 156 (330)
T ss_pred ECCCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEcccCchHheEE---CCCCCEEeccCCCCeECCCCC
Confidence 9999999999999876 679999999999999999999999999999999999999 778899999999998764433
Q ss_pred c--eecccccccccchhhhh-------hhcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCCC
Q 042823 182 V--YRDIVGSGFYIAPEVLR-------RRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSI 252 (477)
Q Consensus 182 ~--~~~~~gt~~y~aPE~~~-------~~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 252 (477)
. .....||+.|+|||++. ..++.++|||||||++|+|++|..||...+....+..+.........+..+.+
T Consensus 157 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 236 (330)
T cd05601 157 MVNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAKTYNNIMNFQRFLKFPEDPKV 236 (330)
T ss_pred ceeeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHHHHHHHHHcCCCccCCCCCCCC
Confidence 2 22347899999999985 24788999999999999999999999888877777777665432222333568
Q ss_pred CHHHHHHHHHhcccCccccCCHHHHhcCcccCcC
Q 042823 253 SSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRES 286 (477)
Q Consensus 253 ~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~ 286 (477)
++.+.+||.+||+ +|.+|||+.++++||||...
T Consensus 237 ~~~~~~li~~ll~-~p~~R~t~~~l~~h~~~~~~ 269 (330)
T cd05601 237 SSDFLDLIQSLLC-GQKERLGYEGLCCHPFFSKI 269 (330)
T ss_pred CHHHHHHHHHHcc-ChhhCCCHHHHhCCCCcCCC
Confidence 9999999999998 99999999999999999764
|
Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor |
| >cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-48 Score=374.42 Aligned_cols=250 Identities=30% Similarity=0.492 Sum_probs=212.3
Q ss_pred ccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEeccCC
Q 042823 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVVMELCEG 108 (477)
Q Consensus 29 ~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~lv~e~~~g 108 (477)
+.||+|+||.||+|.++.+++.||+|++.+...........+.+|..++..+.+||||+++++++.+...+|+|||||+|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSG 80 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence 46999999999999999999999999997654333344566788999998887899999999999999999999999999
Q ss_pred CchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCcccc-CCCcceeccc
Q 042823 109 GDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLF-EEGQVYRDIV 187 (477)
Q Consensus 109 g~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~-~~~~~~~~~~ 187 (477)
|+|.+++.+.+.+++..+..++.||+.||.|||++|++||||||+||++ +..+.+||+|||++... .........+
T Consensus 81 g~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nili---~~~~~~kL~Dfg~~~~~~~~~~~~~~~~ 157 (329)
T cd05588 81 GDLMFHMQRQRKLPEEHARFYSAEISLALNFLHERGIIYRDLKLDNVLL---DAEGHIKLTDYGMCKEGIRPGDTTSTFC 157 (329)
T ss_pred CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEE---CCCCCEEECcCccccccccCCCcccccc
Confidence 9999999888899999999999999999999999999999999999999 77889999999998753 2233334568
Q ss_pred ccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCC---------hhhHHHHHHcCCccCCCCCCCCCCHHHH
Q 042823 188 GSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAET---------KKGTYDAILQGEIDFDTDPWPSISSTAK 257 (477)
Q Consensus 188 gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~---------~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 257 (477)
||+.|+|||++.+ .++.++|+|||||++|+|++|..||.... .......+.......+ ..++..+.
T Consensus 158 gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~p----~~~~~~~~ 233 (329)
T cd05588 158 GTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEKQIRIP----RSLSVKAS 233 (329)
T ss_pred CCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHcCCCCCC----CCCCHHHH
Confidence 9999999999875 58899999999999999999999995321 1123334444433332 35789999
Q ss_pred HHHHHhcccCccccCC------HHHHhcCcccCc
Q 042823 258 DLVRRMLTKDPKRRIT------AAQVLEHPWLRE 285 (477)
Q Consensus 258 ~li~~~l~~dp~~R~s------~~~~l~h~~~~~ 285 (477)
++|.+||+.||.+||| +.++++||||..
T Consensus 234 ~li~~~L~~dP~~R~~~~~~~~~~~i~~hp~~~~ 267 (329)
T cd05588 234 SVLKGFLNKDPKERLGCHPQTGFRDIKSHPFFRN 267 (329)
T ss_pred HHHHHHhccCHHHcCCCCCCCCHHHHhcCCCCCC
Confidence 9999999999999997 789999999965
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl |
| >cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.8e-48 Score=371.62 Aligned_cols=251 Identities=27% Similarity=0.461 Sum_probs=215.1
Q ss_pred ccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEeccCC
Q 042823 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVVMELCEG 108 (477)
Q Consensus 29 ~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~lv~e~~~g 108 (477)
+.||+|+||.||+|.++.+++.||+|++.+..............|..++..+.+||||+++++++.+.+.+|+|||||+|
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~ 80 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence 46999999999999999999999999997643222233455667888877766899999999999999999999999999
Q ss_pred CchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCC-Ccceeccc
Q 042823 109 GDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEE-GQVYRDIV 187 (477)
Q Consensus 109 g~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~-~~~~~~~~ 187 (477)
|+|..++...+.+++..+..++.|++.||.|||++||+||||||+||++ +.++.+||+|||++..... ........
T Consensus 81 g~L~~~i~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nil~---~~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 157 (316)
T cd05620 81 GDLMFHIQDKGRFDLYRATFYAAEIVCGLQFLHSKGIIYRDLKLDNVML---DRDGHIKIADFGMCKENVFGDNRASTFC 157 (316)
T ss_pred CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEE---CCCCCEEeCccCCCeecccCCCceeccC
Confidence 9999999888889999999999999999999999999999999999999 7778999999998864321 22334567
Q ss_pred ccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCCCCHHHHHHHHHhccc
Q 042823 188 GSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTK 266 (477)
Q Consensus 188 gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~ 266 (477)
||+.|+|||++.+ .++.++||||+||++|+|++|..||...+.......+......++ ..++.+++++|.+||+.
T Consensus 158 gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~li~~~l~~ 233 (316)
T cd05620 158 GTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDELFESIRVDTPHYP----RWITKESKDILEKLFER 233 (316)
T ss_pred CCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCC----CCCCHHHHHHHHHHccC
Confidence 9999999999875 689999999999999999999999998887777777665543332 24789999999999999
Q ss_pred CccccCCH-HHHhcCcccCcC
Q 042823 267 DPKRRITA-AQVLEHPWLRES 286 (477)
Q Consensus 267 dp~~R~s~-~~~l~h~~~~~~ 286 (477)
||++||++ +++++||||...
T Consensus 234 dP~~R~~~~~~~~~h~~f~~~ 254 (316)
T cd05620 234 DPTRRLGVVGNIRGHPFFKTI 254 (316)
T ss_pred CHHHcCCChHHHHcCCCcCCC
Confidence 99999998 588899999764
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I |
| >cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-47 Score=371.04 Aligned_cols=251 Identities=29% Similarity=0.499 Sum_probs=214.3
Q ss_pred ccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEeccCC
Q 042823 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVVMELCEG 108 (477)
Q Consensus 29 ~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~lv~e~~~g 108 (477)
+.||+|+||.||+|.+..+++.||+|++.+..............|..++..+.+||||+++++++..+..+|+||||++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~g 80 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 46999999999999999999999999987543222233445566777776666899999999999999999999999999
Q ss_pred CchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCC-Ccceeccc
Q 042823 109 GDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEE-GQVYRDIV 187 (477)
Q Consensus 109 g~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~-~~~~~~~~ 187 (477)
|+|.+++...+.+++..+..++.||+.||.|||++||+||||||+||++ +.++.+||+|||++..... .......+
T Consensus 81 g~L~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dlkp~Nill---~~~~~~kL~Dfg~a~~~~~~~~~~~~~~ 157 (316)
T cd05592 81 GDLMFHIQSSGRFDEARARFYAAEIICGLQFLHKKGIIYRDLKLDNVLL---DKDGHIKIADFGMCKENMNGEGKASTFC 157 (316)
T ss_pred CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHeEE---CCCCCEEEccCcCCeECCCCCCcccccc
Confidence 9999999888889999999999999999999999999999999999999 7788999999999875432 22334567
Q ss_pred ccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCCCCHHHHHHHHHhccc
Q 042823 188 GSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTK 266 (477)
Q Consensus 188 gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~ 266 (477)
||+.|+|||++.+ .++.++|||||||++|+|++|..||.+.+.......+......++ ..++.++.++|.+||+.
T Consensus 158 gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~~~~----~~~~~~~~~ll~~~l~~ 233 (316)
T cd05592 158 GTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDEDELFDSILNDRPHFP----RWISKEAKDCLSKLFER 233 (316)
T ss_pred CCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCC----CCCCHHHHHHHHHHccC
Confidence 9999999999875 589999999999999999999999998888777777765543332 35789999999999999
Q ss_pred CccccCCH-HHHhcCcccCcC
Q 042823 267 DPKRRITA-AQVLEHPWLRES 286 (477)
Q Consensus 267 dp~~R~s~-~~~l~h~~~~~~ 286 (477)
||++||++ .++++||||...
T Consensus 234 ~P~~R~~~~~~l~~h~~~~~~ 254 (316)
T cd05592 234 DPTKRLGVDGDIRQHPFFRGI 254 (316)
T ss_pred CHHHcCCChHHHHcCcccCCC
Confidence 99999986 478899999764
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp |
| >cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-47 Score=378.71 Aligned_cols=263 Identities=32% Similarity=0.511 Sum_probs=222.7
Q ss_pred ccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCe
Q 042823 19 EDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETA 98 (477)
Q Consensus 19 ~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~ 98 (477)
..-.++|++.+.||+|+||.||+|.++.+++.||+|++.+...........+.+|+.++..+ +||||+++++++.+...
T Consensus 39 ~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~-~hp~iv~~~~~~~~~~~ 117 (371)
T cd05622 39 RMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFA-NSPWVVQLFYAFQDDRY 117 (371)
T ss_pred CcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhC-CCCCCCeEEEEEEcCCE
Confidence 34457999999999999999999999999999999998754332233345577888888888 79999999999999999
Q ss_pred EEEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccC
Q 042823 99 VHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFE 178 (477)
Q Consensus 99 ~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~ 178 (477)
+|+|||||+||+|.+++... .+++..+..++.||+.||.|||++||+||||||+||++ +.++.+||+|||++....
T Consensus 118 ~~lv~Ey~~gg~L~~~~~~~-~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NIll---~~~~~ikL~DfG~a~~~~ 193 (371)
T cd05622 118 LYMVMEYMPGGDLVNLMSNY-DVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLL---DKSGHLKLADFGTCMKMN 193 (371)
T ss_pred EEEEEcCCCCCcHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHEEE---CCCCCEEEEeCCceeEcC
Confidence 99999999999999888654 58999999999999999999999999999999999999 678899999999997664
Q ss_pred CCc--ceecccccccccchhhhhh-----hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCC
Q 042823 179 EGQ--VYRDIVGSGFYIAPEVLRR-----RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPS 251 (477)
Q Consensus 179 ~~~--~~~~~~gt~~y~aPE~~~~-----~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 251 (477)
... .....+||+.|+|||++.+ .++.++|||||||++|+|++|.+||.+.+....+..+.........+..+.
T Consensus 194 ~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 273 (371)
T cd05622 194 KEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDND 273 (371)
T ss_pred cCCcccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCcccCCCcCC
Confidence 322 2235679999999999863 278899999999999999999999999888888888877554443334457
Q ss_pred CCHHHHHHHHHhcccCccc--cCCHHHHhcCcccCcC
Q 042823 252 ISSTAKDLVRRMLTKDPKR--RITAAQVLEHPWLRES 286 (477)
Q Consensus 252 ~~~~~~~li~~~l~~dp~~--R~s~~~~l~h~~~~~~ 286 (477)
++..++++|.+||..+|.+ |+++.++++||||+..
T Consensus 274 ~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h~~~~~~ 310 (371)
T cd05622 274 ISKEAKNLICAFLTDREVRLGRNGVEEIKRHLFFKND 310 (371)
T ss_pred CCHHHHHHHHHHcCChhhhcCCCCHHHHhcCcccCCC
Confidence 8999999999999854443 7899999999999764
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an |
| >cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-47 Score=371.47 Aligned_cols=251 Identities=29% Similarity=0.520 Sum_probs=218.5
Q ss_pred ccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEeccCC
Q 042823 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVVMELCEG 108 (477)
Q Consensus 29 ~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~lv~e~~~g 108 (477)
+.||+|+||+||+|.++.+++.||+|++.+...........+.+|..++..+.+||||+++++++.+.+.+|+|||||+|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNG 80 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 46999999999999999999999999997653333334556778888888887899999999999999999999999999
Q ss_pred CchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccC-CCcceeccc
Q 042823 109 GDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFE-EGQVYRDIV 187 (477)
Q Consensus 109 g~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~-~~~~~~~~~ 187 (477)
|+|..++.+.+.+++.++..++.|++.||.|||++||+||||||+||++ +.++.+||+|||++.... ........+
T Consensus 81 ~~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill---~~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 157 (318)
T cd05570 81 GDLMFHIQRSGRFDEPRARFYAAEIVLGLQFLHERGIIYRDLKLDNVLL---DSEGHIKIADFGMCKEGILGGVTTSTFC 157 (318)
T ss_pred CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEccCCCHHHeEE---CCCCcEEecccCCCeecCcCCCccccee
Confidence 9999999888889999999999999999999999999999999999999 778899999999886532 222233457
Q ss_pred ccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCCCCHHHHHHHHHhccc
Q 042823 188 GSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTK 266 (477)
Q Consensus 188 gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~ 266 (477)
||+.|+|||++.+ .++.++|||||||++|+|++|..||.+.........+......++ ..+++.+.+||++||+.
T Consensus 158 g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~~~~~~i~~~~~~~~----~~~~~~~~~li~~~l~~ 233 (318)
T cd05570 158 GTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDEDELFQSILEDEVRYP----RWLSKEAKSILKSFLTK 233 (318)
T ss_pred cCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCC----CcCCHHHHHHHHHHccC
Confidence 9999999999875 689999999999999999999999988887777777776654433 35789999999999999
Q ss_pred CccccCCH-----HHHhcCcccCcC
Q 042823 267 DPKRRITA-----AQVLEHPWLRES 286 (477)
Q Consensus 267 dp~~R~s~-----~~~l~h~~~~~~ 286 (477)
||.+|||+ .++++||||+..
T Consensus 234 dP~~R~s~~~~~~~~ll~~~~~~~~ 258 (318)
T cd05570 234 NPEKRLGCLPTGEQDIKGHPFFREI 258 (318)
T ss_pred CHHHcCCCCCCCHHHHhcCCCcCCC
Confidence 99999999 999999999764
|
Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re |
| >cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-48 Score=374.43 Aligned_cols=250 Identities=32% Similarity=0.537 Sum_probs=217.1
Q ss_pred ccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEeccCC
Q 042823 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVVMELCEG 108 (477)
Q Consensus 29 ~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~lv~e~~~g 108 (477)
+.||+|+||.||+|.+..+++.||+|++.+...........+.+|++++..+ +||||+++++++.....+|+||||++|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~-~hp~i~~~~~~~~~~~~~~lv~E~~~~ 79 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNS-RHPFLTALKYSFQTHDRLCFVMEYANG 79 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhC-CCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence 4699999999999999999999999999764333333445667889988888 799999999999999999999999999
Q ss_pred CchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH-cCCeeccCCCCceeeeecCCCCCEEEeecCCccccC-CCcceecc
Q 042823 109 GDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHS-MGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFE-EGQVYRDI 186 (477)
Q Consensus 109 g~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~-~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~-~~~~~~~~ 186 (477)
|+|..++...+.+++..+..++.||+.||.|||+ +||+||||||+||++ +.++.+||+|||++.... ........
T Consensus 80 ~~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~~ivHrDikp~NIll---~~~~~~kL~Dfg~~~~~~~~~~~~~~~ 156 (325)
T cd05594 80 GELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLML---DKDGHIKITDFGLCKEGIKDGATMKTF 156 (325)
T ss_pred CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCCeEEE---CCCCCEEEecCCCCeecCCCCcccccc
Confidence 9999999888889999999999999999999997 799999999999999 778899999999987532 22233446
Q ss_pred cccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCCCCHHHHHHHHHhcc
Q 042823 187 VGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLT 265 (477)
Q Consensus 187 ~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~ 265 (477)
.||+.|+|||++.+ .++.++|||||||++|+|++|..||.+.........+......++ ..+++++.+||.+||+
T Consensus 157 ~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~~~~~~i~~~~~~~p----~~~~~~~~~li~~~L~ 232 (325)
T cd05594 157 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFP----RTLSPEAKSLLSGLLK 232 (325)
T ss_pred cCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHHHHHHHHhcCCCCCC----CCCCHHHHHHHHHHhh
Confidence 79999999999864 689999999999999999999999988877777777766555443 3578999999999999
Q ss_pred cCccccC-----CHHHHhcCcccCcC
Q 042823 266 KDPKRRI-----TAAQVLEHPWLRES 286 (477)
Q Consensus 266 ~dp~~R~-----s~~~~l~h~~~~~~ 286 (477)
.||++|+ ++.++++||||...
T Consensus 233 ~dP~~R~~~~~~~~~~il~h~~~~~~ 258 (325)
T cd05594 233 KDPKQRLGGGPDDAKEIMQHKFFAGI 258 (325)
T ss_pred cCHHHhCCCCCCCHHHHhcCCCcCCC
Confidence 9999997 99999999999764
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien |
| >cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.7e-48 Score=375.06 Aligned_cols=256 Identities=27% Similarity=0.500 Sum_probs=214.2
Q ss_pred cccccccccccCCeEEEEEEEc---cCCceEEEEEeecCCcc-chhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeE
Q 042823 24 HYFFGRMLGRGQFGVSYLCTEN---STNRPYACKSIAKKPKM-RLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAV 99 (477)
Q Consensus 24 ~Y~~~~~iG~G~~g~V~~~~~~---~~~~~~aiK~~~~~~~~-~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~ 99 (477)
+|++++.||+|+||.||+|++. .+++.||+|++.+.... .......+.+|+.++..+.+||||+++++++..++.+
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKL 80 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEE
Confidence 4889999999999999998864 57899999998753221 2233456778999999997899999999999999999
Q ss_pred EEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCC
Q 042823 100 HVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEE 179 (477)
Q Consensus 100 ~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~ 179 (477)
|+|||||+||+|.+++.....+++.++..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++.....
T Consensus 81 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nili---~~~~~~kl~DfG~~~~~~~ 157 (332)
T cd05614 81 HLILDYVSGGEMFTHLYQRDNFSEDEVRFYSGEIILALEHLHKLGIVYRDIKLENILL---DSEGHVVLTDFGLSKEFLS 157 (332)
T ss_pred EEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHeEE---CCCCCEEEeeCcCCccccc
Confidence 9999999999999999988889999999999999999999999999999999999999 6778999999999876432
Q ss_pred C--cceecccccccccchhhhhh--hcCCccchHhHHHHHHHHhhCCCCCCCCCh----hhHHHHHHcCCccCCCCCCCC
Q 042823 180 G--QVYRDIVGSGFYIAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPFWAETK----KGTYDAILQGEIDFDTDPWPS 251 (477)
Q Consensus 180 ~--~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~l~tg~~pf~~~~~----~~~~~~i~~~~~~~~~~~~~~ 251 (477)
. .......||+.|+|||++.+ .++.++|||||||++|+|+||..||..... ......+..... ...+.
T Consensus 158 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~----~~~~~ 233 (332)
T cd05614 158 EEKERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQSEVSRRILKCDP----PFPSF 233 (332)
T ss_pred cCCCccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCCHHHHHHHHhcCCC----CCCCC
Confidence 2 22234579999999999875 378899999999999999999999965432 222333333322 22346
Q ss_pred CCHHHHHHHHHhcccCccccC-----CHHHHhcCcccCcC
Q 042823 252 ISSTAKDLVRRMLTKDPKRRI-----TAAQVLEHPWLRES 286 (477)
Q Consensus 252 ~~~~~~~li~~~l~~dp~~R~-----s~~~~l~h~~~~~~ 286 (477)
+++.++++|.+||+.||++|| +++++++||||+..
T Consensus 234 ~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~~~~ 273 (332)
T cd05614 234 IGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKEHPFFKGL 273 (332)
T ss_pred CCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHcCCCcCCC
Confidence 899999999999999999999 88999999999764
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph |
| >cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.8e-48 Score=366.63 Aligned_cols=256 Identities=28% Similarity=0.419 Sum_probs=211.1
Q ss_pred ccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 042823 23 LHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVV 102 (477)
Q Consensus 23 ~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~lv 102 (477)
++|.+.+.||+|+||.||+|+++.+++.||+|++...... ......+.+|+.+++.+ +||||+++++++..++.+|+|
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~-~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv 78 (287)
T cd07848 1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEEN-EEVKETTLRELKMLRTL-KQENIVELKEAFRRRGKLYLV 78 (287)
T ss_pred CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEeccccc-ccchhhHHHHHHHHHhC-CCccccchhhhEecCCEEEEE
Confidence 4799999999999999999999999999999998754322 23345678899999999 799999999999999999999
Q ss_pred EeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCCCc-
Q 042823 103 MELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQ- 181 (477)
Q Consensus 103 ~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~- 181 (477)
|||++++++..+......+++..++.++.|++.||.|||+.||+||||||+||++ +.++.+||+|||++.......
T Consensus 79 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nill---~~~~~~kl~Dfg~~~~~~~~~~ 155 (287)
T cd07848 79 FEYVEKNMLELLEEMPNGVPPEKVRSYIYQLIKAIHWCHKNDIVHRDIKPENLLI---SHNDVLKLCDFGFARNLSEGSN 155 (287)
T ss_pred EecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE---cCCCcEEEeeccCccccccccc
Confidence 9999987775554445678999999999999999999999999999999999999 677899999999998754322
Q ss_pred -ceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCcc----------------
Q 042823 182 -VYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEID---------------- 243 (477)
Q Consensus 182 -~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~---------------- 243 (477)
......||+.|+|||++.+ .++.++||||+||++|+|++|++||.+.+.......+......
T Consensus 156 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (287)
T cd07848 156 ANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNPRFH 235 (287)
T ss_pred ccccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhccchhc
Confidence 2234578999999999864 5899999999999999999999999876654443332221100
Q ss_pred ---CCC---------CCCCCCCHHHHHHHHHhcccCccccCCHHHHhcCccc
Q 042823 244 ---FDT---------DPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWL 283 (477)
Q Consensus 244 ---~~~---------~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~ 283 (477)
++. ..+..+|+.+.+||++||++||++|||++++|+||||
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~hp~f 287 (287)
T cd07848 236 GLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLNHPAF 287 (287)
T ss_pred ccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhcCCCC
Confidence 000 0112368889999999999999999999999999997
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes |
| >cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-47 Score=371.12 Aligned_cols=251 Identities=30% Similarity=0.485 Sum_probs=212.4
Q ss_pred ccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEeccCC
Q 042823 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVVMELCEG 108 (477)
Q Consensus 29 ~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~lv~e~~~g 108 (477)
+.||+|+||.||+|.++.+++.||+|++.+...........+.+|+.++.++.+||||+++++++...+.+|+||||++|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~ 80 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG 80 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCC
Confidence 46999999999999999999999999998654334445566788998888887899999999999999999999999999
Q ss_pred CchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccC-CCcceeccc
Q 042823 109 GDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFE-EGQVYRDIV 187 (477)
Q Consensus 109 g~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~-~~~~~~~~~ 187 (477)
|+|..++...+.+++..+..++.||+.||.|||++||+||||||+||++ +.++.+||+|||++.... .........
T Consensus 81 ~~L~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~Dikp~Nili---~~~~~~kL~DfG~~~~~~~~~~~~~~~~ 157 (329)
T cd05618 81 GDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLL---DSEGHIKLTDYGMCKEGLRPGDTTSTFC 157 (329)
T ss_pred CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEE---CCCCCEEEeeCCccccccCCCCcccccc
Confidence 9999999888889999999999999999999999999999999999999 778899999999987532 222334567
Q ss_pred ccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCC---------hhhHHHHHHcCCccCCCCCCCCCCHHHH
Q 042823 188 GSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAET---------KKGTYDAILQGEIDFDTDPWPSISSTAK 257 (477)
Q Consensus 188 gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~---------~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 257 (477)
||+.|+|||++.+ .++.++|||||||++|+|++|..||.... .......+......++ ..++..+.
T Consensus 158 gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~p----~~~~~~~~ 233 (329)
T cd05618 158 GTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIP----RSLSVKAA 233 (329)
T ss_pred CCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhcCCCCCC----CCCCHHHH
Confidence 9999999999875 58899999999999999999999995311 1123334444443332 46789999
Q ss_pred HHHHHhcccCccccCC------HHHHhcCcccCcC
Q 042823 258 DLVRRMLTKDPKRRIT------AAQVLEHPWLRES 286 (477)
Q Consensus 258 ~li~~~l~~dp~~R~s------~~~~l~h~~~~~~ 286 (477)
++|++||+.||++||+ +.++++||||+..
T Consensus 234 ~ll~~~L~~dP~~R~~~~~~~~~~~i~~hp~f~~~ 268 (329)
T cd05618 234 SVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNV 268 (329)
T ss_pred HHHHHHhcCCHHHcCCCCCCCCHHHHhcCCCCCCC
Confidence 9999999999999998 5799999999764
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o |
| >KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-48 Score=376.75 Aligned_cols=262 Identities=29% Similarity=0.396 Sum_probs=219.1
Q ss_pred ccccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccC-----CCCeeEEEE
Q 042823 17 AYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSG-----QPNVVEFKS 91 (477)
Q Consensus 17 ~~~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~-----hpniv~~~~ 91 (477)
..+++..+|.+.+.||+|+||.|.+|++..|++.||||+++.++ ....+-..|+.++..|.. .-|+|++++
T Consensus 180 ~~d~i~~rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k----~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d 255 (586)
T KOG0667|consen 180 VNDHIAYRYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKK----RFLRQAQIEIRILELLNKHDPDDKYNIVRMLD 255 (586)
T ss_pred ecceeEEEEEEEEEecccccceeEEEEecCCCcEEEEEeeccCh----HHHHHHHHHHHHHHHHhccCCCCCeeEEEeee
Confidence 44567779999999999999999999999999999999997654 334556679999998862 358999999
Q ss_pred EEEeCCeEEEEEeccCCCchHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEe
Q 042823 92 TYEDETAVHVVMELCEGGDLFDRIIAKG--YNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVT 169 (477)
Q Consensus 92 ~~~~~~~~~lv~e~~~gg~L~~~l~~~~--~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~ 169 (477)
+|...+++|||+|+++- +|+++++.+. .++...++.++.||+.||.+||+.||||+||||+|||+..... ..||||
T Consensus 256 ~F~fr~HlciVfELL~~-NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l~IIHcDLKPENILL~~~~r-~~vKVI 333 (586)
T KOG0667|consen 256 YFYFRNHLCIVFELLST-NLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHELGIIHCDLKPENILLKDPKR-SRIKVI 333 (586)
T ss_pred ccccccceeeeehhhhh-hHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCChhheeeccCCc-CceeEE
Confidence 99999999999999965 9999999865 5789999999999999999999999999999999999966443 489999
Q ss_pred ecCCccccCCCcceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCc------
Q 042823 170 DFGSALLFEEGQVYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEI------ 242 (477)
Q Consensus 170 Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~------ 242 (477)
|||.|....... ...+.+.+|+|||++.| +|+.+.||||||||++||++|.+.|.+.+..+++..|..-..
T Consensus 334 DFGSSc~~~q~v--ytYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~ne~DQl~~I~e~lG~Pp~~m 411 (586)
T KOG0667|consen 334 DFGSSCFESQRV--YTYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGDNEYDQLARIIEVLGLPPPKM 411 (586)
T ss_pred ecccccccCCcc--eeeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCCCCHHHHHHHHHHHhCCCCHHH
Confidence 999998765433 37788999999999876 799999999999999999999999999887777665543100
Q ss_pred ---------cCCC-C-------------------------------CCC------------CCCHHHHHHHHHhcccCcc
Q 042823 243 ---------DFDT-D-------------------------------PWP------------SISSTAKDLVRRMLTKDPK 269 (477)
Q Consensus 243 ---------~~~~-~-------------------------------~~~------------~~~~~~~~li~~~l~~dp~ 269 (477)
.+.. . ..| .-...+.+||++||.+||.
T Consensus 412 L~~~~~~~kff~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~P~~~~~l~~~~~~~~~~~F~dflk~~L~~dP~ 491 (586)
T KOG0667|consen 412 LDTAKKAHKFFTSLKGFPRLCVETSAPRGTKSPEVRKYYRKARLERRGPPGSRSLESGLPKADDKLFIDFLKRCLEWDPA 491 (586)
T ss_pred HHhccccceehhccCCceeeeeeecccccccchhhhhhhhhhcccccCCCCCcccchhcccccHHHHHHHHHHHhccCch
Confidence 0000 0 001 1124578999999999999
Q ss_pred ccCCHHHHhcCcccCcC
Q 042823 270 RRITAAQVLEHPWLRES 286 (477)
Q Consensus 270 ~R~s~~~~l~h~~~~~~ 286 (477)
+|+|+.++|+|||+...
T Consensus 492 ~R~tp~qal~Hpfl~~~ 508 (586)
T KOG0667|consen 492 ERITPAQALNHPFLTGT 508 (586)
T ss_pred hcCCHHHHhcCcccccc
Confidence 99999999999999843
|
|
| >KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-47 Score=366.28 Aligned_cols=249 Identities=26% Similarity=0.351 Sum_probs=211.7
Q ss_pred cccccccccccccCCeEEEEEEEccCCce-EEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCC-eE
Q 042823 22 MLHYFFGRMLGRGQFGVSYLCTENSTNRP-YACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDET-AV 99 (477)
Q Consensus 22 ~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~-~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~-~~ 99 (477)
.....+.+.||+|+||+||+|.+. |+. ||+|++......... ...+.+|+.++.++ +|||||++++++.++. .+
T Consensus 40 ~~~l~~~~~iG~G~~g~V~~~~~~--g~~~vavK~~~~~~~~~~~-~~~f~~E~~il~~l-~HpNIV~f~G~~~~~~~~~ 115 (362)
T KOG0192|consen 40 PDELPIEEVLGSGSFGTVYKGKWR--GTDVVAVKIISDPDFDDES-RKAFRREASLLSRL-RHPNIVQFYGACTSPPGSL 115 (362)
T ss_pred hHHhhhhhhcccCCceeEEEEEeC--CceeEEEEEecchhcChHH-HHHHHHHHHHHHhC-CCCCeeeEEEEEcCCCCce
Confidence 344566677999999999999985 455 999999765443333 77899999999999 7999999999999887 79
Q ss_pred EEEEeccCCCchHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHcC-CeeccCCCCceeeeecCCCC-CEEEeecCCcc
Q 042823 100 HVVMELCEGGDLFDRIIA--KGYNSERDAATVLRAIVNAVNVCHSMG-VMHRDLKPENFSFISRDDNA-LLKVTDFGSAL 175 (477)
Q Consensus 100 ~lv~e~~~gg~L~~~l~~--~~~~~~~~~~~i~~qil~~L~~lH~~~-ivH~dlkp~Nil~~~~~~~~-~~kl~Dfg~a~ 175 (477)
+|||||+++|+|.+++.. ...++...+..++.||+.||.|||+++ ||||||||+|||+ +... ++||+|||+++
T Consensus 116 ~iVtEy~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~~~iIHrDLK~~NiLv---~~~~~~~KI~DFGlsr 192 (362)
T KOG0192|consen 116 CIVTEYMPGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSEGPIIHRDLKSDNILV---DLKGKTLKIADFGLSR 192 (362)
T ss_pred EEEEEeCCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCeeecccChhhEEE---cCCCCEEEECCCccce
Confidence 999999999999999988 678999999999999999999999999 9999999999999 6665 99999999998
Q ss_pred ccCCC-cceecccccccccchhhhhh---hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCC
Q 042823 176 LFEEG-QVYRDIVGSGFYIAPEVLRR---RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPS 251 (477)
Q Consensus 176 ~~~~~-~~~~~~~gt~~y~aPE~~~~---~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 251 (477)
..... .......||+.|||||++.+ .|+.++||||||+++|||+||..||......+....+..+......+ ..
T Consensus 193 ~~~~~~~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~~~~~~v~~~~~Rp~~p--~~ 270 (362)
T KOG0192|consen 193 EKVISKTSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPVQVASAVVVGGLRPPIP--KE 270 (362)
T ss_pred eeccccccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCCCCCCC--cc
Confidence 76544 23344689999999999985 49999999999999999999999999888766666665443322211 23
Q ss_pred CCHHHHHHHHHhcccCccccCCHHHHhc
Q 042823 252 ISSTAKDLVRRMLTKDPKRRITAAQVLE 279 (477)
Q Consensus 252 ~~~~~~~li~~~l~~dp~~R~s~~~~l~ 279 (477)
+++.+..++.+||..||.+||++.+++.
T Consensus 271 ~~~~l~~l~~~CW~~dp~~RP~f~ei~~ 298 (362)
T KOG0192|consen 271 CPPHLSSLMERCWLVDPSRRPSFLEIVS 298 (362)
T ss_pred CCHHHHHHHHHhCCCCCCcCCCHHHHHH
Confidence 8899999999999999999999999864
|
|
| >KOG0589 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-48 Score=370.54 Aligned_cols=256 Identities=32% Similarity=0.481 Sum_probs=230.4
Q ss_pred cccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCe-EE
Q 042823 22 MLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETA-VH 100 (477)
Q Consensus 22 ~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~-~~ 100 (477)
+++|.+++.+|+|+||.+++++++..++.+|+|.+...... ........+|+.++.++ .|||||.+.+.|..++. ++
T Consensus 3 m~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t-~~~r~~A~~E~~lis~~-~hP~iv~y~ds~~~~~~~l~ 80 (426)
T KOG0589|consen 3 MDNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLT-EPERRSAIQEMDLLSKL-LHPNIVEYKDSFEEDGQLLC 80 (426)
T ss_pred cchhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccC-chhhHHHHHHHHHHHhc-cCCCeeeeccchhcCCceEE
Confidence 57899999999999999999999999999999999765433 33455778999999998 79999999999998888 99
Q ss_pred EEEeccCCCchHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccC
Q 042823 101 VVMELCEGGDLFDRIIAKG--YNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFE 178 (477)
Q Consensus 101 lv~e~~~gg~L~~~l~~~~--~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~ 178 (477)
|||+||+||+|.+.+.+.+ .+++..+..++.|++.|+.|||+++|+|||||+.||++ .....|||.|||+|+...
T Consensus 81 Ivm~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~~iLHRDlK~~Nifl---tk~~~VkLgDfGlaK~l~ 157 (426)
T KOG0589|consen 81 IVMEYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHENRVLHRDLKCANIFL---TKDKKVKLGDFGLAKILN 157 (426)
T ss_pred EEEeecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhhhhhcccchhhhhhc---cccCceeecchhhhhhcC
Confidence 9999999999999998754 68999999999999999999999999999999999999 677789999999999987
Q ss_pred CCc-ceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCCCCHHH
Q 042823 179 EGQ-VYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTA 256 (477)
Q Consensus 179 ~~~-~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 256 (477)
+.. ...+.+|||+||+||++.+ +|+.|+|||||||++|||++-+++|.+.+......+|.++..... ...+|.++
T Consensus 158 ~~~~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~~Li~ki~~~~~~Pl---p~~ys~el 234 (426)
T KOG0589|consen 158 PEDSLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNMSELILKINRGLYSPL---PSMYSSEL 234 (426)
T ss_pred CchhhhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccchHHHHHHHhhccCCCC---CccccHHH
Confidence 765 5567899999999999986 699999999999999999999999999999999999988873322 24689999
Q ss_pred HHHHHHhcccCccccCCHHHHhcCcccCc
Q 042823 257 KDLVRRMLTKDPKRRITAAQVLEHPWLRE 285 (477)
Q Consensus 257 ~~li~~~l~~dp~~R~s~~~~l~h~~~~~ 285 (477)
+.+|+.||.++|+.||++.++|.+|.+..
T Consensus 235 ~~lv~~~l~~~P~~RPsa~~LL~~P~l~~ 263 (426)
T KOG0589|consen 235 RSLVKSMLRKNPEHRPSALELLRRPHLLR 263 (426)
T ss_pred HHHHHHHhhcCCccCCCHHHHhhChhhhh
Confidence 99999999999999999999999988753
|
|
| >cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-47 Score=368.20 Aligned_cols=251 Identities=27% Similarity=0.458 Sum_probs=214.1
Q ss_pred ccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEeccCC
Q 042823 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVVMELCEG 108 (477)
Q Consensus 29 ~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~lv~e~~~g 108 (477)
+.||+|+||+||+|.++.+++.||+|++.+..............|..++..+.+||||+++++++.+.+.+|+||||++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~ 80 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence 46999999999999999999999999987643222223345566777777666899999999999999999999999999
Q ss_pred CchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCC-Ccceeccc
Q 042823 109 GDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEE-GQVYRDIV 187 (477)
Q Consensus 109 g~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~-~~~~~~~~ 187 (477)
|+|.+++.....+++.++..++.|++.||.|||++||+||||||+||++ +.++.+||+|||++..... ........
T Consensus 81 g~L~~~l~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivHrdikp~Nil~---~~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 157 (316)
T cd05619 81 GDLMFHIQSCHKFDLPRATFYAAEIICGLQFLHSKGIVYRDLKLDNILL---DTDGHIKIADFGMCKENMLGDAKTCTFC 157 (316)
T ss_pred CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEE---CCCCCEEEccCCcceECCCCCCceeeec
Confidence 9999999888889999999999999999999999999999999999999 7778999999999875322 22334567
Q ss_pred ccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCCCCHHHHHHHHHhccc
Q 042823 188 GSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTK 266 (477)
Q Consensus 188 gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~ 266 (477)
||+.|+|||++.+ .++.++||||+||++|+|++|..||.+.+.......+......++ ..++.+++++|.+||+.
T Consensus 158 gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~i~~~~~~~~----~~~~~~~~~li~~~l~~ 233 (316)
T cd05619 158 GTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEELFQSIRMDNPCYP----RWLTREAKDILVKLFVR 233 (316)
T ss_pred CCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCC----ccCCHHHHHHHHHHhcc
Confidence 9999999999875 589999999999999999999999988877777776665543322 24789999999999999
Q ss_pred CccccCCHH-HHhcCcccCcC
Q 042823 267 DPKRRITAA-QVLEHPWLRES 286 (477)
Q Consensus 267 dp~~R~s~~-~~l~h~~~~~~ 286 (477)
||++||++. ++++||||+..
T Consensus 234 ~P~~R~~~~~~l~~h~~~~~~ 254 (316)
T cd05619 234 EPERRLGVKGDIRQHPFFREI 254 (316)
T ss_pred CHhhcCCChHHHHcCcccCCC
Confidence 999999996 89999999764
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in |
| >cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-47 Score=370.14 Aligned_cols=254 Identities=29% Similarity=0.488 Sum_probs=216.8
Q ss_pred ccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhcc--CCCCeeEEEEEEEeCCeEEEE
Q 042823 25 YFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLS--GQPNVVEFKSTYEDETAVHVV 102 (477)
Q Consensus 25 Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~--~hpniv~~~~~~~~~~~~~lv 102 (477)
|++.+.||+|+||.||+|.++.+++.||+|++.+...........+.+|++++..+. +||||+++++++.....+|+|
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv 80 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFV 80 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEE
Confidence 788999999999999999999999999999997543223334556777776654332 699999999999999999999
Q ss_pred EeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCC-Cc
Q 042823 103 MELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEE-GQ 181 (477)
Q Consensus 103 ~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~-~~ 181 (477)
|||++||+|..++.. +.+++..+..++.||+.||.|||++||+||||||+||++ +.++.+||+|||++..... ..
T Consensus 81 ~E~~~~~~L~~~~~~-~~l~~~~~~~~~~qi~~al~~lH~~~ivHrdlkp~Nill---~~~~~~kL~Dfg~~~~~~~~~~ 156 (324)
T cd05589 81 MEYAAGGDLMMHIHT-DVFSEPRAVFYAACVVLGLQYLHENKIVYRDLKLDNLLL---DTEGFVKIADFGLCKEGMGFGD 156 (324)
T ss_pred EcCCCCCcHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEE---CCCCcEEeCcccCCccCCCCCC
Confidence 999999999877754 568999999999999999999999999999999999999 7788999999998865322 22
Q ss_pred ceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCCCCHHHHHHH
Q 042823 182 VYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLV 260 (477)
Q Consensus 182 ~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li 260 (477)
.....+||+.|+|||++.+ .++.++|||||||++|+|++|..||.+.+.......+..+...++ +.+++.+.++|
T Consensus 157 ~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~~~~~~i~~~~~~~p----~~~~~~~~~li 232 (324)
T cd05589 157 RTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEEVFDSIVNDEVRYP----RFLSREAISIM 232 (324)
T ss_pred cccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCC----CCCCHHHHHHH
Confidence 2345679999999999875 588999999999999999999999998888888777777655433 35799999999
Q ss_pred HHhcccCccccC-----CHHHHhcCcccCcC
Q 042823 261 RRMLTKDPKRRI-----TAAQVLEHPWLRES 286 (477)
Q Consensus 261 ~~~l~~dp~~R~-----s~~~~l~h~~~~~~ 286 (477)
.+||+.||.+|| ++.++++||||+..
T Consensus 233 ~~~L~~dP~~R~~~~~~~~~~l~~~~~f~~~ 263 (324)
T cd05589 233 RRLLRRNPERRLGSGEKDAEDVKKQPFFRDI 263 (324)
T ss_pred HHHhhcCHhHcCCCCCCCHHHHhhCCCcCCC
Confidence 999999999999 79999999999764
|
Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved |
| >cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-47 Score=371.35 Aligned_cols=250 Identities=29% Similarity=0.535 Sum_probs=213.6
Q ss_pred ccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHH-HhccCCCCeeEEEEEEEeCCeEEEEEeccC
Q 042823 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIR-LYLSGQPNVVEFKSTYEDETAVHVVMELCE 107 (477)
Q Consensus 29 ~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~-~~l~~hpniv~~~~~~~~~~~~~lv~e~~~ 107 (477)
+.||+|+||+||+|.++.+|+.||+|++.+...........+.+|..++ ..+ +||||+++++++.....+|+||||++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l-~hp~iv~~~~~~~~~~~~~lv~e~~~ 79 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNV-KHPFLVGLHYSFQTADKLYFVLDYVN 79 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhC-CCCCCCCeeEEEEeCCEEEEEEcCCC
Confidence 4699999999999999999999999998754332223334455565544 445 79999999999999999999999999
Q ss_pred CCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCC-Ccceecc
Q 042823 108 GGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEE-GQVYRDI 186 (477)
Q Consensus 108 gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~-~~~~~~~ 186 (477)
||+|..++...+.+++..+..++.||+.||.|||++||+||||||+||++ +.++.+||+|||++..... .......
T Consensus 80 ~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~givH~dikp~NIll---~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 156 (323)
T cd05575 80 GGELFFHLQRERSFPEPRARFYAAEIASALGYLHSLNIIYRDLKPENILL---DSQGHVVLTDFGLCKEGIEHSKTTSTF 156 (323)
T ss_pred CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEE---CCCCcEEEeccCCCcccccCCCccccc
Confidence 99999999988889999999999999999999999999999999999999 7788999999999875322 2223445
Q ss_pred cccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCCCCHHHHHHHHHhcc
Q 042823 187 VGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLT 265 (477)
Q Consensus 187 ~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~ 265 (477)
+||+.|+|||++.+ .++.++|||||||++|+|++|.+||...+..+....+..+....+ +.+++.+.++|.+||+
T Consensus 157 ~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~----~~~~~~~~~li~~~l~ 232 (323)
T cd05575 157 CGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAEMYDNILNKPLRLK----PNISVSARHLLEGLLQ 232 (323)
T ss_pred cCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCHHHHHHHHHcCCCCCC----CCCCHHHHHHHHHHhh
Confidence 79999999999865 588999999999999999999999998888788777777654432 4679999999999999
Q ss_pred cCccccCCH----HHHhcCcccCcC
Q 042823 266 KDPKRRITA----AQVLEHPWLRES 286 (477)
Q Consensus 266 ~dp~~R~s~----~~~l~h~~~~~~ 286 (477)
.||.+||++ .++++||||...
T Consensus 233 ~~p~~R~~~~~~~~~il~~~~~~~~ 257 (323)
T cd05575 233 KDRTKRLGAKDDFLEIKNHVFFSSI 257 (323)
T ss_pred cCHHhCCCCCCCHHHHHcCCCcCCC
Confidence 999999997 699999999753
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr |
| >cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-47 Score=366.94 Aligned_cols=258 Identities=24% Similarity=0.361 Sum_probs=208.3
Q ss_pred cccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEE
Q 042823 22 MLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHV 101 (477)
Q Consensus 22 ~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~l 101 (477)
.++|.+.+.||+|+||.||+|.++.+++.||+|++...... .......+|+.+++.+ +||||+++++++.+....|+
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~--~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~l 80 (303)
T cd07869 4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEE--GTPFTAIREASLLKGL-KHANIVLLHDIIHTKETLTL 80 (303)
T ss_pred cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEecccccc--ccchhHHHHHHHHhhC-CCCCcCeEEEEEecCCeEEE
Confidence 36899999999999999999999999999999998654321 2234567899999999 79999999999999999999
Q ss_pred EEeccCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCCC
Q 042823 102 VMELCEGGDLFDRIIAK-GYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEG 180 (477)
Q Consensus 102 v~e~~~gg~L~~~l~~~-~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~ 180 (477)
||||+. ++|.+++... +.+++..++.++.|++.||.|||++||+||||||+||++ +..+.+||+|||++......
T Consensus 81 v~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill---~~~~~~kl~Dfg~~~~~~~~ 156 (303)
T cd07869 81 VFEYVH-TDLCQYMDKHPGGLHPENVKLFLFQLLRGLSYIHQRYILHRDLKPQNLLI---SDTGELKLADFGLARAKSVP 156 (303)
T ss_pred EEECCC-cCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE---CCCCCEEECCCCcceeccCC
Confidence 999996 5888887664 568999999999999999999999999999999999999 67888999999998754322
Q ss_pred -cceecccccccccchhhhhh--hcCCccchHhHHHHHHHHhhCCCCCCCCChh-hHHHHHHcC--Cc------------
Q 042823 181 -QVYRDIVGSGFYIAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPFWAETKK-GTYDAILQG--EI------------ 242 (477)
Q Consensus 181 -~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~l~tg~~pf~~~~~~-~~~~~i~~~--~~------------ 242 (477)
.......||+.|+|||++.+ .++.++||||+||++|+|++|.+||.+.... ..+..+... ..
T Consensus 157 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (303)
T cd07869 157 SHTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPGVHSLP 236 (303)
T ss_pred CccCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCCChhhccchhhcc
Confidence 22344578999999999864 4788999999999999999999999775432 222222110 00
Q ss_pred cCCCCC------------C--CCCCHHHHHHHHHhcccCccccCCHHHHhcCcccCcC
Q 042823 243 DFDTDP------------W--PSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRES 286 (477)
Q Consensus 243 ~~~~~~------------~--~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~ 286 (477)
.+.... | ...++.+++|+.+||+.||.+|||+.++++||||+..
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~h~~f~~~ 294 (303)
T cd07869 237 HFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALSHEYFSDL 294 (303)
T ss_pred ccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhcCcccccC
Confidence 000000 0 1245789999999999999999999999999999864
|
Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an |
| >cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-47 Score=368.90 Aligned_cols=256 Identities=28% Similarity=0.488 Sum_probs=221.9
Q ss_pred cccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEE
Q 042823 24 HYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVVM 103 (477)
Q Consensus 24 ~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~lv~ 103 (477)
+|.+.+.||+|+||.||+|.++.+++.||+|++.+...........+..|..++..+.+||+|+++++++.+.+.+|+||
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVM 80 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEE
Confidence 47788999999999999999999999999999876433223344567778888888867889999999999999999999
Q ss_pred eccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCCC-cc
Q 042823 104 ELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEG-QV 182 (477)
Q Consensus 104 e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~-~~ 182 (477)
||++||+|.+++...+.+++.++..++.||+.||.|||++||+||||||+||++ +.++.+||+|||++...... ..
T Consensus 81 Ey~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivHrDikp~Nill---~~~~~ikL~Dfg~~~~~~~~~~~ 157 (323)
T cd05615 81 EYVNGGDLMYHIQQVGKFKEPQAVFYAAEISVGLFFLHRRGIIYRDLKLDNVML---DSEGHIKIADFGMCKEHMVDGVT 157 (323)
T ss_pred cCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEE---CCCCCEEEeccccccccCCCCcc
Confidence 999999999999988899999999999999999999999999999999999999 77889999999998754322 22
Q ss_pred eecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCCCCHHHHHHHH
Q 042823 183 YRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVR 261 (477)
Q Consensus 183 ~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~ 261 (477)
.....||+.|+|||++.+ .++.++||||+||++|+|++|.+||.+.........+......++ ..+++++.+++.
T Consensus 158 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~~~~~p----~~~~~~~~~li~ 233 (323)
T cd05615 158 TRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYP----KSLSKEAVSICK 233 (323)
T ss_pred ccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCC----ccCCHHHHHHHH
Confidence 344579999999999864 589999999999999999999999998888888888877655443 357899999999
Q ss_pred HhcccCccccCC-----HHHHhcCcccCcC
Q 042823 262 RMLTKDPKRRIT-----AAQVLEHPWLRES 286 (477)
Q Consensus 262 ~~l~~dp~~R~s-----~~~~l~h~~~~~~ 286 (477)
+||+.+|.+|++ ..++++||||...
T Consensus 234 ~~l~~~p~~R~~~~~~~~~~i~~h~~f~~~ 263 (323)
T cd05615 234 GLMTKHPSKRLGCGPEGERDIREHAFFRRI 263 (323)
T ss_pred HHcccCHhhCCCCCCCCHHHHhcCcccCCC
Confidence 999999999997 5789999999754
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a |
| >cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-47 Score=360.99 Aligned_cols=259 Identities=31% Similarity=0.479 Sum_probs=216.8
Q ss_pred cccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEE
Q 042823 24 HYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVVM 103 (477)
Q Consensus 24 ~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~lv~ 103 (477)
.|++.+.||+|+||+||+|.+..+++.||+|++.............+.+|+.+++.+ +||||+++++++.....+|+||
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~ 79 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKV-NSRFVVSLAYAYETKDALCLVL 79 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhc-CCCCEeeeeeeecCCCeEEEEE
Confidence 488899999999999999999999999999998754332223334567899999999 7999999999999999999999
Q ss_pred eccCCCchHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCCCc
Q 042823 104 ELCEGGDLFDRIIAK--GYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQ 181 (477)
Q Consensus 104 e~~~gg~L~~~l~~~--~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~ 181 (477)
||+.||+|.+++... ..+++..+..++.|++.||.|||++|++||||||+||++ ++.+.++|+|||++.......
T Consensus 80 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~---~~~~~~~l~Dfg~~~~~~~~~ 156 (285)
T cd05605 80 TLMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRERIVYRDLKPENILL---DDYGHIRISDLGLAVEIPEGE 156 (285)
T ss_pred eccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHEEE---CCCCCEEEeeCCCceecCCCC
Confidence 999999999888654 458999999999999999999999999999999999999 777899999999998765444
Q ss_pred ceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCCCCHHHHHHH
Q 042823 182 VYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLV 260 (477)
Q Consensus 182 ~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li 260 (477)
......|++.|+|||++.+ .++.++||||+||++|+|++|..||.+.........+............+.+++.+.+||
T Consensus 157 ~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 236 (285)
T cd05605 157 TIRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKREEVERRVKEDQEEYSEKFSEAARSIC 236 (285)
T ss_pred ccccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhhHHHHHHHHhhhcccccCcccCHHHHHHH
Confidence 4445678999999999864 588899999999999999999999987665443333332222222222346899999999
Q ss_pred HHhcccCccccC-----CHHHHhcCcccCcC
Q 042823 261 RRMLTKDPKRRI-----TAAQVLEHPWLRES 286 (477)
Q Consensus 261 ~~~l~~dp~~R~-----s~~~~l~h~~~~~~ 286 (477)
.+||..||.+|| ++.++++||||...
T Consensus 237 ~~~l~~~P~~R~~~~~~~~~~l~~~~~~~~~ 267 (285)
T cd05605 237 RQLLTKDPGFRLGCRGEGAEEVKAHPFFRTA 267 (285)
T ss_pred HHHccCCHHHhcCCCCCCHHHHhcCcCccCC
Confidence 999999999999 89999999999763
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, |
| >cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-47 Score=367.49 Aligned_cols=251 Identities=32% Similarity=0.572 Sum_probs=216.5
Q ss_pred cccccccCCeEEEEEEEc---cCCceEEEEEeecCCcc-chhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEE
Q 042823 28 GRMLGRGQFGVSYLCTEN---STNRPYACKSIAKKPKM-RLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVVM 103 (477)
Q Consensus 28 ~~~iG~G~~g~V~~~~~~---~~~~~~aiK~~~~~~~~-~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~lv~ 103 (477)
++.||+|+||.||+|.+. .+++.||+|++.+.... .......+.+|+.++..+ +||||+++++++..++.+|+||
T Consensus 1 ~~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~iv~~~~~~~~~~~~~lv~ 79 (323)
T cd05584 1 LKVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAV-KHPFIVDLIYAFQTGGKLYLIL 79 (323)
T ss_pred CceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhC-CCCchhceeeEEecCCeEEEEE
Confidence 367999999999999864 57889999998754221 122344567899999999 7999999999999999999999
Q ss_pred eccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCC-Ccc
Q 042823 104 ELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEE-GQV 182 (477)
Q Consensus 104 e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~-~~~ 182 (477)
||++||+|.+++...+.+++..+..++.||+.||.|||++||+||||||+||++ +.++.+||+|||++..... ...
T Consensus 80 e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~---~~~~~~kl~Dfg~~~~~~~~~~~ 156 (323)
T cd05584 80 EYLSGGELFMHLEREGIFMEDTACFYLSEISLALEHLHQQGIIYRDLKPENILL---DAQGHVKLTDFGLCKESIHEGTV 156 (323)
T ss_pred eCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEE---CCCCCEEEeeCcCCeecccCCCc
Confidence 999999999999998889999999999999999999999999999999999999 7788999999999875322 222
Q ss_pred eecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCCCCHHHHHHHH
Q 042823 183 YRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVR 261 (477)
Q Consensus 183 ~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~ 261 (477)
.....||+.|+|||++.+ .++.++|||||||++|+|++|.+||...........+..+....+ +.+++.+.+||.
T Consensus 157 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~li~ 232 (323)
T cd05584 157 THTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRKKTIDKILKGKLNLP----PYLTPEARDLLK 232 (323)
T ss_pred ccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCC----CCCCHHHHHHHH
Confidence 344579999999999865 578999999999999999999999998888777788877655443 467899999999
Q ss_pred HhcccCccccC-----CHHHHhcCcccCcC
Q 042823 262 RMLTKDPKRRI-----TAAQVLEHPWLRES 286 (477)
Q Consensus 262 ~~l~~dp~~R~-----s~~~~l~h~~~~~~ 286 (477)
+||+.+|++|| ++.++++||||+..
T Consensus 233 ~~l~~~p~~R~~~~~~~~~~l~~h~~~~~~ 262 (323)
T cd05584 233 KLLKRNPSSRLGAGPGDAAEVQSHPFFRHV 262 (323)
T ss_pred HHcccCHhHcCCCCCCCHHHHhcCCCcCCC
Confidence 99999999999 89999999999763
|
Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in |
| >cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-47 Score=372.70 Aligned_cols=250 Identities=29% Similarity=0.524 Sum_probs=213.7
Q ss_pred ccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhcc--CCCCeeEEEEEEEeCCeEEEEEeccCC
Q 042823 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLS--GQPNVVEFKSTYEDETAVHVVMELCEG 108 (477)
Q Consensus 31 iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~--~hpniv~~~~~~~~~~~~~lv~e~~~g 108 (477)
||+|+||+||+|.++.+++.||+|++.+..............|..++..+. +||||+++++++.....+|+||||++|
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~ 80 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG 80 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence 799999999999999999999999987543222223334445666665554 799999999999999999999999999
Q ss_pred CchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccC-CCcceeccc
Q 042823 109 GDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFE-EGQVYRDIV 187 (477)
Q Consensus 109 g~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~-~~~~~~~~~ 187 (477)
|+|.+++.+.+.+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++.... ........+
T Consensus 81 g~L~~~l~~~~~~~~~~~~~~~~qil~al~~LH~~~ivHrDlkp~Nili---~~~~~~kl~Dfg~a~~~~~~~~~~~~~~ 157 (330)
T cd05586 81 GELFWHLQKEGRFSEDRAKFYIAELVLALEHLHKYDIVYRDLKPENILL---DATGHIALCDFGLSKANLTDNKTTNTFC 157 (330)
T ss_pred ChHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEE---CCCCCEEEecCCcCcCCCCCCCCccCcc
Confidence 9999999988899999999999999999999999999999999999999 777899999999987532 222334567
Q ss_pred ccccccchhhhhh--hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCCCCHHHHHHHHHhcc
Q 042823 188 GSGFYIAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLT 265 (477)
Q Consensus 188 gt~~y~aPE~~~~--~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~ 265 (477)
||+.|+|||++.+ .++.++|||||||++|+|++|..||.+....+....+..+...++. ..+++++++||++||+
T Consensus 158 gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~---~~~~~~~~~li~~~L~ 234 (330)
T cd05586 158 GTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQMYRNIAFGKVRFPK---NVLSDEGRQFVKGLLN 234 (330)
T ss_pred CCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCHHHHHHHHHcCCCCCCC---ccCCHHHHHHHHHHcC
Confidence 9999999999864 4789999999999999999999999988887777777776655443 3478999999999999
Q ss_pred cCccccC----CHHHHhcCcccCcC
Q 042823 266 KDPKRRI----TAAQVLEHPWLRES 286 (477)
Q Consensus 266 ~dp~~R~----s~~~~l~h~~~~~~ 286 (477)
.||.+|| ++.++++||||...
T Consensus 235 ~~P~~R~~~~~~~~~ll~h~~~~~~ 259 (330)
T cd05586 235 RNPQHRLGAHRDAVELKEHPFFADI 259 (330)
T ss_pred CCHHHCCCCCCCHHHHhcCccccCC
Confidence 9999998 79999999999764
|
Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of |
| >cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-47 Score=367.61 Aligned_cols=260 Identities=31% Similarity=0.515 Sum_probs=218.2
Q ss_pred ccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 042823 23 LHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVV 102 (477)
Q Consensus 23 ~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~lv 102 (477)
++|++.+.||+|+||+||+|.++.+++.||+|++.+...........+.+|+.++..+ +||||+++++++.+++++|+|
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~~~~~~lv 79 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNG-DRRWITNLHYAFQDENNLYLV 79 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhC-CCCCCCceEEEEecCCeEEEE
Confidence 4799999999999999999999999999999999754333334456678899888888 799999999999999999999
Q ss_pred EeccCCCchHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCCCc
Q 042823 103 MELCEGGDLFDRIIA-KGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQ 181 (477)
Q Consensus 103 ~e~~~gg~L~~~l~~-~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~ 181 (477)
|||++||+|.+++.+ ...+++..+..++.||+.||.|||++||+||||||+||++ +.++.+||+|||++.......
T Consensus 80 ~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill---~~~~~~kl~Dfg~~~~~~~~~ 156 (331)
T cd05597 80 MDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVLAIDSVHQLGYVHRDIKPDNVLL---DKNGHIRLADFGSCLRLLADG 156 (331)
T ss_pred EecCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEECCCCHHHEEE---CCCCCEEEEECCceeecCCCC
Confidence 999999999999976 4578999999999999999999999999999999999999 778899999999987654332
Q ss_pred ce--ecccccccccchhhhh------hhcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCC-CCCCCCC
Q 042823 182 VY--RDIVGSGFYIAPEVLR------RRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFD-TDPWPSI 252 (477)
Q Consensus 182 ~~--~~~~gt~~y~aPE~~~------~~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~-~~~~~~~ 252 (477)
.. ....||+.|+|||++. +.++.++||||+||++|+|++|..||......+.+..+......+. +...+.+
T Consensus 157 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 236 (331)
T cd05597 157 TVQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKEHFQFPPDVTDV 236 (331)
T ss_pred CccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCHHHHHHHHHcCCCcccCCCccCCC
Confidence 21 2246999999999986 3478899999999999999999999988777777777665432222 1223458
Q ss_pred CHHHHHHHHHhcccCccc--cCCHHHHhcCcccCcC
Q 042823 253 SSTAKDLVRRMLTKDPKR--RITAAQVLEHPWLRES 286 (477)
Q Consensus 253 ~~~~~~li~~~l~~dp~~--R~s~~~~l~h~~~~~~ 286 (477)
|+.++++|++||..++.. |+++.++++||||...
T Consensus 237 ~~~~~~li~~ll~~~~~r~~r~~~~~~l~hp~~~~~ 272 (331)
T cd05597 237 SEEAKDLIRRLICSPETRLGRNGLQDFKDHPFFEGI 272 (331)
T ss_pred CHHHHHHHHHHccCcccccCCCCHHHHhcCCCCCCC
Confidence 999999999998764443 7899999999999753
|
Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy, |
| >cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.7e-47 Score=360.64 Aligned_cols=256 Identities=25% Similarity=0.362 Sum_probs=208.3
Q ss_pred ccccccccccccCCeEEEEEEEcc-CCceEEEEEeecCCccchhhHHHHHHHHHHHHhcc--CCCCeeEEEEEEE-----
Q 042823 23 LHYFFGRMLGRGQFGVSYLCTENS-TNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLS--GQPNVVEFKSTYE----- 94 (477)
Q Consensus 23 ~~Y~~~~~iG~G~~g~V~~~~~~~-~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~--~hpniv~~~~~~~----- 94 (477)
++|++.+.||+|+||.||+|.+.. +++.||+|++....... .......+|+.++..+. +||||+++++++.
T Consensus 1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~ 79 (290)
T cd07862 1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEE-GMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTD 79 (290)
T ss_pred CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCC-CchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCC
Confidence 479999999999999999999854 56889999886543222 12234556777776653 6999999999985
Q ss_pred eCCeEEEEEeccCCCchHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecC
Q 042823 95 DETAVHVVMELCEGGDLFDRIIAK--GYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFG 172 (477)
Q Consensus 95 ~~~~~~lv~e~~~gg~L~~~l~~~--~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg 172 (477)
....+++||||+. ++|.+++... ..+++..+..++.|++.||.|||++||+||||||+||++ +.++.+||+|||
T Consensus 80 ~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~iiH~dlkp~Nil~---~~~~~~kl~Dfg 155 (290)
T cd07862 80 RETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILV---TSSGQIKLADFG 155 (290)
T ss_pred CCCcEEEEEccCC-CCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEE---cCCCCEEEcccc
Confidence 3456899999997 5899988763 358999999999999999999999999999999999999 677899999999
Q ss_pred CccccCCCcceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCC-----
Q 042823 173 SALLFEEGQVYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDT----- 246 (477)
Q Consensus 173 ~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~----- 246 (477)
++.............||+.|+|||++.+ .++.++||||+||++|+|++|.+||.+.+..+.+..+.........
T Consensus 156 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~ 235 (290)
T cd07862 156 LARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPR 235 (290)
T ss_pred ceEeccCCcccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhchh
Confidence 9987654444445678999999999864 6889999999999999999999999988777766666542111000
Q ss_pred ------------------CCCCCCCHHHHHHHHHhcccCccccCCHHHHhcCccc
Q 042823 247 ------------------DPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWL 283 (477)
Q Consensus 247 ------------------~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~ 283 (477)
...+.+++.+++++.+||+.||++|||+.++|+||||
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~hp~f 290 (290)
T cd07862 236 DVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYF 290 (290)
T ss_pred hhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhcCCCC
Confidence 0124578889999999999999999999999999997
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla |
| >cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-47 Score=370.32 Aligned_cols=259 Identities=30% Similarity=0.456 Sum_probs=210.6
Q ss_pred cccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeC-----Ce
Q 042823 24 HYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDE-----TA 98 (477)
Q Consensus 24 ~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~-----~~ 98 (477)
+|++.+.||+|+||.||+|+++.+++.||+|++..... .......+.+|+.+++.+ +||||+++++++... ..
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~~~~ 78 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFE-HVSDATRILREIKLLRLL-RHPDIVEIKHIMLPPSRREFKD 78 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhc-cchhHHHHHHHHHHHHhC-CCCCEeeecceEeccCCCCCce
Confidence 69999999999999999999999999999999864322 223345678999999999 799999999988543 35
Q ss_pred EEEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccC
Q 042823 99 VHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFE 178 (477)
Q Consensus 99 ~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~ 178 (477)
+|+|||||. ++|.+++.....+++..+..++.||+.||.|||++||+||||||+||++ +.++.+||+|||++....
T Consensus 79 ~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll---~~~~~~kL~Dfg~~~~~~ 154 (338)
T cd07859 79 IYVVFELME-SDLHQVIKANDDLTPEHHQFFLYQLLRALKYIHTANVFHRDLKPKNILA---NADCKLKICDFGLARVAF 154 (338)
T ss_pred EEEEEecCC-CCHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEE---CCCCcEEEccCccccccc
Confidence 899999995 6999999888889999999999999999999999999999999999999 778899999999987542
Q ss_pred CCc----ceecccccccccchhhhhh---hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHc------------
Q 042823 179 EGQ----VYRDIVGSGFYIAPEVLRR---RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQ------------ 239 (477)
Q Consensus 179 ~~~----~~~~~~gt~~y~aPE~~~~---~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~------------ 239 (477)
... ......||+.|+|||++.+ .++.++|||||||++|+|++|++||.+.+.......+..
T Consensus 155 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (338)
T cd07859 155 NDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPETISR 234 (338)
T ss_pred cccCccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCHHHHHH
Confidence 211 1234579999999999853 688999999999999999999999977654332221110
Q ss_pred ---------------CCccCCCCCCCCCCHHHHHHHHHhcccCccccCCHHHHhcCcccCcCCC
Q 042823 240 ---------------GEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGE 288 (477)
Q Consensus 240 ---------------~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~~~ 288 (477)
.........++.+++.+.++|.+||+.||++|||+.++++||||+....
T Consensus 235 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~hp~f~~~~~ 298 (338)
T cd07859 235 VRNEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALADPYFKGLAK 298 (338)
T ss_pred hhhhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhcCchhhhcCc
Confidence 0000011123567889999999999999999999999999999976543
|
Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos |
| >cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-46 Score=365.64 Aligned_cols=251 Identities=28% Similarity=0.467 Sum_probs=212.4
Q ss_pred ccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEeccCC
Q 042823 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVVMELCEG 108 (477)
Q Consensus 29 ~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~lv~e~~~g 108 (477)
+.||+|+||.||+|.++.+++.||+|++.+...........+.+|+.++.++.+||||+++++++.....+|+|||||+|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNG 80 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCC
Confidence 46999999999999999999999999997654433445566888999988887899999999999999999999999999
Q ss_pred CchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCcccc-CCCcceeccc
Q 042823 109 GDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLF-EEGQVYRDIV 187 (477)
Q Consensus 109 g~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~-~~~~~~~~~~ 187 (477)
|+|..++...+.+++..+..++.||+.||.|||++||+||||||+||++ +.++.+||+|||++... .........+
T Consensus 81 ~~L~~~~~~~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nili---~~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 157 (327)
T cd05617 81 GDLMFHMQRQRKLPEEHARFYAAEICIALNFLHERGIIYRDLKLDNVLL---DADGHIKLTDYGMCKEGLGPGDTTSTFC 157 (327)
T ss_pred CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEE---eCCCCEEEeccccceeccCCCCceeccc
Confidence 9999999888889999999999999999999999999999999999999 67788999999998753 2233344568
Q ss_pred ccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCC-------hhhHHHHHHcCCccCCCCCCCCCCHHHHHH
Q 042823 188 GSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAET-------KKGTYDAILQGEIDFDTDPWPSISSTAKDL 259 (477)
Q Consensus 188 gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~-------~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l 259 (477)
||+.|+|||++.+ .++.++|||||||++|+|++|..||.... .......+......++ ..+|..+.++
T Consensus 158 gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~p----~~~~~~~~~l 233 (327)
T cd05617 158 GTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILEKPIRIP----RFLSVKASHV 233 (327)
T ss_pred CCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHHhCCCCCC----CCCCHHHHHH
Confidence 9999999999864 68899999999999999999999996422 1223333333332222 3578999999
Q ss_pred HHHhcccCccccCC------HHHHhcCcccCcC
Q 042823 260 VRRMLTKDPKRRIT------AAQVLEHPWLRES 286 (477)
Q Consensus 260 i~~~l~~dp~~R~s------~~~~l~h~~~~~~ 286 (477)
|.+||+.||.+|++ +.++++||||...
T Consensus 234 i~~~L~~dP~~R~~~~~~~~~~~i~~h~~f~~~ 266 (327)
T cd05617 234 LKGFLNKDPKERLGCQPQTGFSDIKSHTFFRSI 266 (327)
T ss_pred HHHHhccCHHHcCCCCCCCCHHHHHcCCCCCCC
Confidence 99999999999998 5699999999764
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways |
| >cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-47 Score=368.41 Aligned_cols=251 Identities=29% Similarity=0.515 Sum_probs=214.3
Q ss_pred ccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEeccCC
Q 042823 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVVMELCEG 108 (477)
Q Consensus 29 ~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~lv~e~~~g 108 (477)
+.||+|+||+||+|.++.+|+.||+|++.+...........+..|..++.+..+||||+++++++..++.+|+||||++|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNG 80 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCC
Confidence 46999999999999999999999999997653333334445566665544433899999999999999999999999999
Q ss_pred CchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccC-CCcceeccc
Q 042823 109 GDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFE-EGQVYRDIV 187 (477)
Q Consensus 109 g~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~-~~~~~~~~~ 187 (477)
|+|..++...+.+++..+..++.||+.||.|||++||+||||||+||++ +.++.+||+|||++.... ........+
T Consensus 81 ~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~givH~Dlkp~NIll---~~~~~~kL~DfG~~~~~~~~~~~~~~~~ 157 (325)
T cd05604 81 GELFFHLQRERSFPEPRARFYAAEIASALGYLHSINIVYRDLKPENILL---DSQGHVVLTDFGLCKEGIAQSDTTTTFC 157 (325)
T ss_pred CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEE---CCCCCEEEeecCCcccCCCCCCCccccc
Confidence 9999999988899999999999999999999999999999999999999 778899999999987532 222334567
Q ss_pred ccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCCCCHHHHHHHHHhccc
Q 042823 188 GSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTK 266 (477)
Q Consensus 188 gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~ 266 (477)
||+.|+|||++.+ .++.++|||||||++|+|++|.+||...+.......+........ +..+..+.++|.+||+.
T Consensus 158 gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~ll~~ll~~ 233 (325)
T cd05604 158 GTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAEMYDNILHKPLVLR----PGASLTAWSILEELLEK 233 (325)
T ss_pred CChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCHHHHHHHHHcCCccCC----CCCCHHHHHHHHHHhcc
Confidence 9999999999875 588999999999999999999999998888788887777654432 46789999999999999
Q ss_pred CccccCCH----HHHhcCcccCcC
Q 042823 267 DPKRRITA----AQVLEHPWLRES 286 (477)
Q Consensus 267 dp~~R~s~----~~~l~h~~~~~~ 286 (477)
+|.+||++ .++++||||...
T Consensus 234 ~p~~R~~~~~~~~~i~~h~~f~~~ 257 (325)
T cd05604 234 DRQRRLGAKEDFLEIQEHPFFESL 257 (325)
T ss_pred CHHhcCCCCCCHHHHhcCCCcCCC
Confidence 99999976 589999999753
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, |
| >cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-46 Score=357.70 Aligned_cols=252 Identities=27% Similarity=0.436 Sum_probs=207.2
Q ss_pred ccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEeccCCCc
Q 042823 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVVMELCEGGD 110 (477)
Q Consensus 31 iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~lv~e~~~gg~ 110 (477)
||+|+||+||+|.++.+++.||+|++.+...........+..|+.++..+ +||||+++.+++..+..+|+||||++||+
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l-~~~~i~~~~~~~~~~~~~~lv~e~~~~g~ 79 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKV-HSRFIVSLAYAFQTKTDLCLVMTIMNGGD 79 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhC-CCCcEeeeeEEEcCCCeEEEEEeCCCCCC
Confidence 79999999999999999999999998754332223345667899999999 79999999999999999999999999999
Q ss_pred hHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCCCc-ceec
Q 042823 111 LFDRIIA----KGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQ-VYRD 185 (477)
Q Consensus 111 L~~~l~~----~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~-~~~~ 185 (477)
|.+++.. ...+++..+..++.||+.||.|||++||+||||||+||++ +.++.+||+|||++....... ....
T Consensus 80 L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili---~~~~~~~l~dfg~~~~~~~~~~~~~~ 156 (280)
T cd05608 80 LRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRRIIYRDLKPENVLL---DNDGNVRISDLGLAVELKDGQSKTKG 156 (280)
T ss_pred HHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEE---CCCCCEEEeeCccceecCCCCccccc
Confidence 9887743 3568999999999999999999999999999999999999 677889999999987654332 2234
Q ss_pred ccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCCCCHHHHHHHHHhc
Q 042823 186 IVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRML 264 (477)
Q Consensus 186 ~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l 264 (477)
..||+.|+|||++.+ .++.++||||+||++|+|++|..||...........+.......+....+.+|+.+.+++.+||
T Consensus 157 ~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l 236 (280)
T cd05608 157 YAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRILNDSVTYPDKFSPASKSFCEALL 236 (280)
T ss_pred cCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchhHHHHHHhhcccCCCCcccCCHHHHHHHHHHh
Confidence 578999999999874 6889999999999999999999999765433222222222211122223468999999999999
Q ss_pred ccCccccC-----CHHHHhcCcccCcC
Q 042823 265 TKDPKRRI-----TAAQVLEHPWLRES 286 (477)
Q Consensus 265 ~~dp~~R~-----s~~~~l~h~~~~~~ 286 (477)
+.||++|| +++++++||||+..
T Consensus 237 ~~~P~~R~~~~~~~~~~~l~h~~~~~~ 263 (280)
T cd05608 237 AKDPEKRLGFRDGNCDGLRTHPLFRDL 263 (280)
T ss_pred cCCHHHhcCCCCCCHHHHhcChhhhcC
Confidence 99999999 88999999999763
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g |
| >cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-47 Score=366.87 Aligned_cols=250 Identities=28% Similarity=0.521 Sum_probs=212.1
Q ss_pred ccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHH-HHhccCCCCeeEEEEEEEeCCeEEEEEeccC
Q 042823 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQI-RLYLSGQPNVVEFKSTYEDETAVHVVMELCE 107 (477)
Q Consensus 29 ~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~-~~~l~~hpniv~~~~~~~~~~~~~lv~e~~~ 107 (477)
+.||+|+||+||+|.++.+++.||+|++.+...........+..|... +..+ +||||+++++++...+.+|+||||++
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~-~h~~Iv~~~~~~~~~~~~~lv~e~~~ 79 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNV-KHPFLVGLHFSFQTADKLYFVLDYIN 79 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhC-CCCCCCceeEEEEcCCeEEEEEeCCC
Confidence 469999999999999999999999999975432222233344455544 4445 89999999999999999999999999
Q ss_pred CCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccC-CCcceecc
Q 042823 108 GGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFE-EGQVYRDI 186 (477)
Q Consensus 108 gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~-~~~~~~~~ 186 (477)
||+|.+++...+.+++..+..++.||+.||.|||++||+||||||+||++ +.++.+||+|||++.... ........
T Consensus 80 ~~~L~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~giiHrDlkp~Nili---~~~~~~kl~DfG~a~~~~~~~~~~~~~ 156 (325)
T cd05602 80 GGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILL---DSQGHIVLTDFGLCKENIEHNGTTSTF 156 (325)
T ss_pred CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEE---CCCCCEEEccCCCCcccccCCCCcccc
Confidence 99999999988889999999999999999999999999999999999999 678899999999987532 22233456
Q ss_pred cccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCCCCHHHHHHHHHhcc
Q 042823 187 VGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLT 265 (477)
Q Consensus 187 ~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~ 265 (477)
+||+.|+|||++.+ .++.++|||||||++|+|++|.+||...+....+..+......+ .+.+++.+.++|.+||+
T Consensus 157 ~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~----~~~~~~~~~~li~~~l~ 232 (325)
T cd05602 157 CGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQL----KPNITNSARHLLEGLLQ 232 (325)
T ss_pred cCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHHHHHHHHHhCCcCC----CCCCCHHHHHHHHHHcc
Confidence 79999999999875 58899999999999999999999999888877777777654433 35789999999999999
Q ss_pred cCccccCCHH----HHhcCcccCcC
Q 042823 266 KDPKRRITAA----QVLEHPWLRES 286 (477)
Q Consensus 266 ~dp~~R~s~~----~~l~h~~~~~~ 286 (477)
.||.+||++. ++++|+||...
T Consensus 233 ~~p~~R~~~~~~~~~i~~~~~~~~~ 257 (325)
T cd05602 233 KDRTKRLGAKDDFMEIKNHIFFSPI 257 (325)
T ss_pred cCHHHCCCCCCCHHHHhcCcccCCC
Confidence 9999999876 89999999653
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt |
| >KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-48 Score=365.52 Aligned_cols=265 Identities=34% Similarity=0.568 Sum_probs=239.2
Q ss_pred ccccccccccc--cccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEE
Q 042823 17 AYEDVMLHYFF--GRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYE 94 (477)
Q Consensus 17 ~~~~~~~~Y~~--~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~ 94 (477)
..-+|..-|+| .+.||+|.||+||-|.|+.+|+.||||+|.+...... ....+++|+.|+..+ +||.||.+.-.|+
T Consensus 556 e~vd~stvYQif~devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~k-qesqlR~EVaILq~l-~HPGiV~le~M~E 633 (888)
T KOG4236|consen 556 ENVDISTVYQIFADEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTK-QESQLRNEVAILQNL-HHPGIVNLECMFE 633 (888)
T ss_pred hhhhHHHHHHhhhHhhccCCcceeeecceecccCceeeeeeeecccCCCc-hHHHHHHHHHHHHhc-CCCCeeEEEEeec
Confidence 34466667888 4899999999999999999999999999987655443 347899999999999 7999999999999
Q ss_pred eCCeEEEEEeccCCCchHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecC
Q 042823 95 DETAVHVVMELCEGGDLFDRIIA--KGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFG 172 (477)
Q Consensus 95 ~~~~~~lv~e~~~gg~L~~~l~~--~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg 172 (477)
..+.++.|||-+.| +.++.+.. .+++++...+.++.||+.||.|||-+||+|+||||+|||+.+.+....+||||||
T Consensus 634 T~ervFVVMEKl~G-DMLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~knIvHCDLKPENVLLas~~~FPQvKlCDFG 712 (888)
T KOG4236|consen 634 TPERVFVVMEKLHG-DMLEMILSSEKGRLPERITKFLVTQILVALRYLHFKNIVHCDLKPENVLLASASPFPQVKLCDFG 712 (888)
T ss_pred CCceEEEEehhhcc-hHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhcceeeccCCchheeeccCCCCCceeecccc
Confidence 99999999999966 66666653 5789999999999999999999999999999999999999888888899999999
Q ss_pred CccccCCCcceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCC
Q 042823 173 SALLFEEGQVYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPS 251 (477)
Q Consensus 173 ~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 251 (477)
+|+.+.+..-.++.+|||.|+|||+++. .|....||||+|||+|--++|..||.. ++++-.+|.+..+-+++.+|..
T Consensus 713 fARiIgEksFRrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNE--dEdIndQIQNAaFMyPp~PW~e 790 (888)
T KOG4236|consen 713 FARIIGEKSFRRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNE--DEDINDQIQNAAFMYPPNPWSE 790 (888)
T ss_pred ceeecchhhhhhhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCC--ccchhHHhhccccccCCCchhh
Confidence 9999988777778899999999999975 699999999999999999999999954 4556778888899999999999
Q ss_pred CCHHHHHHHHHhcccCccccCCHHHHhcCcccCcC
Q 042823 252 ISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRES 286 (477)
Q Consensus 252 ~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~ 286 (477)
+|+++.+||..+|+..-.+|.|+++.|.|||++..
T Consensus 791 is~~AidlIn~LLqVkm~kRysvdk~lsh~Wlq~y 825 (888)
T KOG4236|consen 791 ISPEAIDLINNLLQVKMRKRYSVDKSLSHPWLQDY 825 (888)
T ss_pred cCHHHHHHHHHHHHHHHHHhcchHhhccchhhhcc
Confidence 99999999999999999999999999999999865
|
|
| >cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-46 Score=363.06 Aligned_cols=260 Identities=23% Similarity=0.306 Sum_probs=217.1
Q ss_pred cccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEE
Q 042823 22 MLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHV 101 (477)
Q Consensus 22 ~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~l 101 (477)
.++|++.+.||+|+||.||+|+++.++..+|+|++.... .......+.+|++++..+ +||||+++++++..++.+++
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~l 80 (331)
T cd06649 4 DDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEI--KPAIRNQIIRELQVLHEC-NSPYIVGFYGAFYSDGEISI 80 (331)
T ss_pred cccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeeccc--CHHHHHHHHHHHHHHHHC-CCCCCCeEEEEEEECCEEEE
Confidence 578999999999999999999999999999999986542 233456788999999999 79999999999999999999
Q ss_pred EEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHc-CCeeccCCCCceeeeecCCCCCEEEeecCCccccCCC
Q 042823 102 VMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSM-GVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEG 180 (477)
Q Consensus 102 v~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~-~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~ 180 (477)
||||++||+|.+++.....+++..+..++.|++.||.|||+. +|+||||||+||++ +.++.+||+|||++......
T Consensus 81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~ivH~dlkp~Nil~---~~~~~~kl~Dfg~~~~~~~~ 157 (331)
T cd06649 81 CMEHMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILV---NSRGEIKLCDFGVSGQLIDS 157 (331)
T ss_pred EeecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhhcCCEEcCCCChhhEEE---cCCCcEEEccCccccccccc
Confidence 999999999999999888899999999999999999999986 69999999999999 67788999999998765432
Q ss_pred cceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCc-----------------
Q 042823 181 QVYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEI----------------- 242 (477)
Q Consensus 181 ~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~----------------- 242 (477)
......||+.|+|||++.+ .++.++|||||||++|+|++|..||......+....+.....
T Consensus 158 -~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (331)
T cd06649 158 -MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAKELEAIFGRPVVDGEEGEPHSISPRPRPP 236 (331)
T ss_pred -ccccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccccCCccccCcccccc
Confidence 2244579999999999875 589999999999999999999999976554333221111000
Q ss_pred ---------------------------cCCCCCCCCCCHHHHHHHHHhcccCccccCCHHHHhcCcccCcCCC
Q 042823 243 ---------------------------DFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGE 288 (477)
Q Consensus 243 ---------------------------~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~~~ 288 (477)
..+......+++++++||.+||++||++|||+.++++||||+....
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h~~~~~~~~ 309 (331)
T cd06649 237 GRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLMNHTFIKRSEV 309 (331)
T ss_pred cccccccccccccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcccCCCHHHHhcChHHhhccc
Confidence 0001111246889999999999999999999999999999986543
|
Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst |
| >PTZ00036 glycogen synthase kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-47 Score=380.83 Aligned_cols=254 Identities=28% Similarity=0.399 Sum_probs=207.1
Q ss_pred ccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeC----
Q 042823 21 VMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDE---- 96 (477)
Q Consensus 21 ~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~---- 96 (477)
...+|.+++.||+|+||.||+|.+..+++.||+|++.... ....+|+.+++.+ +||||++++++|...
T Consensus 64 ~~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~-------~~~~~Ei~il~~l-~h~niv~l~~~~~~~~~~~ 135 (440)
T PTZ00036 64 PNKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP-------QYKNRELLIMKNL-NHINIIFLKDYYYTECFKK 135 (440)
T ss_pred cCCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc-------chHHHHHHHHHhc-CCCCCcceeeeEeeccccc
Confidence 4467999999999999999999999999999999885432 1234699999999 799999999887432
Q ss_pred ----CeEEEEEeccCCCchHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCC-CCEE
Q 042823 97 ----TAVHVVMELCEGGDLFDRII----AKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDN-ALLK 167 (477)
Q Consensus 97 ----~~~~lv~e~~~gg~L~~~l~----~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~-~~~k 167 (477)
..+++||||+++ +|.+++. ....+++..++.++.||+.||.|||++||+||||||+|||+ +.. +.+|
T Consensus 136 ~~~~~~l~lvmE~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~IiHrDLKp~NILl---~~~~~~vk 211 (440)
T PTZ00036 136 NEKNIFLNVVMEFIPQ-TVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKFICHRDLKPQNLLI---DPNTHTLK 211 (440)
T ss_pred CCCceEEEEEEecCCc-cHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCcCHHHEEE---cCCCCcee
Confidence 257899999976 7777664 34678999999999999999999999999999999999998 433 4799
Q ss_pred EeecCCccccCCCcceecccccccccchhhhhh--hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCC----
Q 042823 168 VTDFGSALLFEEGQVYRDIVGSGFYIAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGE---- 241 (477)
Q Consensus 168 l~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~---- 241 (477)
|+|||+|.............||+.|+|||++.+ .|+.++|||||||++|+|++|.+||.+.+..+.+..+.+..
T Consensus 212 L~DFGla~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~~~p~ 291 (440)
T PTZ00036 212 LCDFGSAKNLLAGQRSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQVLGTPT 291 (440)
T ss_pred eeccccchhccCCCCcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCC
Confidence 999999987655444455688999999999864 58999999999999999999999998877665555443311
Q ss_pred -------------ccCCCC--------CCCCCCHHHHHHHHHhcccCccccCCHHHHhcCcccCcC
Q 042823 242 -------------IDFDTD--------PWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRES 286 (477)
Q Consensus 242 -------------~~~~~~--------~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~ 286 (477)
..++.. .....|+++++||.+||++||.+|||+.++|+||||...
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~hp~f~~~ 357 (440)
T PTZ00036 292 EDQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALADPFFDDL 357 (440)
T ss_pred HHHHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCChhHHhh
Confidence 011110 011367899999999999999999999999999999754
|
|
| >cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-46 Score=364.33 Aligned_cols=250 Identities=29% Similarity=0.507 Sum_probs=211.9
Q ss_pred ccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHH-HHhccCCCCeeEEEEEEEeCCeEEEEEeccC
Q 042823 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQI-RLYLSGQPNVVEFKSTYEDETAVHVVMELCE 107 (477)
Q Consensus 29 ~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~-~~~l~~hpniv~~~~~~~~~~~~~lv~e~~~ 107 (477)
+.||+|+||.||+|++..+++.||+|++.+...........+..|... ++.+ +||||+++++++.+.+.+|+|||||+
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~-~h~~iv~~~~~~~~~~~~~lv~e~~~ 79 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNL-KHPFLVGLHYSFQTAEKLYFVLDYVN 79 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhC-CCCCccceeeEEEcCCEEEEEEcCCC
Confidence 469999999999999999999999999875433222334445556554 4555 89999999999999999999999999
Q ss_pred CCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccC-CCcceecc
Q 042823 108 GGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFE-EGQVYRDI 186 (477)
Q Consensus 108 gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~-~~~~~~~~ 186 (477)
||+|...+.....+++..+..++.||+.||.|||++||+||||||+||++ +.++.+||+|||++.... ........
T Consensus 80 ~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivH~Dlkp~NIll---~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 156 (321)
T cd05603 80 GGELFFHLQRERCFLEPRARFYAAEVASAIGYLHSLNIIYRDLKPENILL---DSQGHVVLTDFGLCKEGVEPEETTSTF 156 (321)
T ss_pred CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEE---CCCCCEEEccCCCCccCCCCCCccccc
Confidence 99999999888889999999999999999999999999999999999999 778899999999987532 22223446
Q ss_pred cccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCCCCHHHHHHHHHhcc
Q 042823 187 VGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLT 265 (477)
Q Consensus 187 ~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~ 265 (477)
+||+.|+|||++.+ .++.++|||||||++|+|++|.+||...+.......+......++ +..+..+.++|.+||+
T Consensus 157 ~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~----~~~~~~~~~li~~~l~ 232 (321)
T cd05603 157 CGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVSQMYDNILHKPLQLP----GGKTVAACDLLVGLLH 232 (321)
T ss_pred cCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCHHHHHHHHhcCCCCCC----CCCCHHHHHHHHHHcc
Confidence 79999999999865 588999999999999999999999998887777777776654333 4578899999999999
Q ss_pred cCccccCCH----HHHhcCcccCcC
Q 042823 266 KDPKRRITA----AQVLEHPWLRES 286 (477)
Q Consensus 266 ~dp~~R~s~----~~~l~h~~~~~~ 286 (477)
.||.+||++ .++++|+||...
T Consensus 233 ~~p~~R~~~~~~~~~~~~~~~~~~~ 257 (321)
T cd05603 233 KDQRRRLGAKADFLEIKNHVFFSPI 257 (321)
T ss_pred CCHhhcCCCCCCHHHHhCCCCcCCC
Confidence 999999975 599999999753
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. |
| >cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-46 Score=363.63 Aligned_cols=260 Identities=29% Similarity=0.483 Sum_probs=218.8
Q ss_pred ccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 042823 23 LHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVV 102 (477)
Q Consensus 23 ~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~lv 102 (477)
++|.+.+.||+|+||.||+|+++.+++.||+|++.+...........+.+|+.++..+ +||||+++++++.+++..|+|
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~-~~~~i~~l~~~~~~~~~~~lv 79 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNG-DCQWITTLHYAFQDENYLYLV 79 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhC-CCCCEeeEEEEEEcCCEEEEE
Confidence 4799999999999999999999999999999998754322333445577888888877 799999999999999999999
Q ss_pred EeccCCCchHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCCCc
Q 042823 103 MELCEGGDLFDRIIA-KGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQ 181 (477)
Q Consensus 103 ~e~~~gg~L~~~l~~-~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~ 181 (477)
|||++||+|.+++.. ...+++..+..++.|++.||.|||++||+||||||+||++ +..+.+||+|||++.......
T Consensus 80 ~Ey~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~~L~~lH~~~iiHrDlkp~Nill---~~~~~~kl~DfG~a~~~~~~~ 156 (331)
T cd05624 80 MDYYVGGDLLTLLSKFEDRLPEDMARFYIAEMVLAIHSIHQLHYVHRDIKPDNVLL---DMNGHIRLADFGSCLKMNQDG 156 (331)
T ss_pred EeCCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCchHHEEE---cCCCCEEEEeccceeeccCCC
Confidence 999999999999987 4678999999999999999999999999999999999999 678889999999987654332
Q ss_pred ce--ecccccccccchhhhhh------hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCC-CCCCCCC
Q 042823 182 VY--RDIVGSGFYIAPEVLRR------RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFD-TDPWPSI 252 (477)
Q Consensus 182 ~~--~~~~gt~~y~aPE~~~~------~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~-~~~~~~~ 252 (477)
.. ....||+.|+|||++.+ .++.++||||+||++|+|++|..||........+..+......++ +..+..+
T Consensus 157 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~ 236 (331)
T cd05624 157 TVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQFPSHITDV 236 (331)
T ss_pred ceeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCHHHHHHHHHcCCCcccCCCccccC
Confidence 22 23579999999999863 578899999999999999999999988877777777766443222 1223467
Q ss_pred CHHHHHHHHHhcccCccc--cCCHHHHhcCcccCcC
Q 042823 253 SSTAKDLVRRMLTKDPKR--RITAAQVLEHPWLRES 286 (477)
Q Consensus 253 ~~~~~~li~~~l~~dp~~--R~s~~~~l~h~~~~~~ 286 (477)
+++++++|.+||..++.+ |++++++++||||...
T Consensus 237 ~~~~~~li~~ll~~~~~~~~~~~~~~~~~h~~f~~~ 272 (331)
T cd05624 237 SEEAKDLIQRLICSRERRLGQNGIEDFKKHAFFEGI 272 (331)
T ss_pred CHHHHHHHHHHccCchhhcCCCCHHHHhcCCCcCCC
Confidence 999999999999876654 5689999999999753
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues. |
| >cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-46 Score=363.18 Aligned_cols=260 Identities=29% Similarity=0.493 Sum_probs=218.4
Q ss_pred ccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 042823 23 LHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVV 102 (477)
Q Consensus 23 ~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~lv 102 (477)
++|.+.+.||+|+||.||++.++.+++.+|+|++.+...........+.+|+.++..+ +||||+++++++.+...+|+|
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~~~~~~lv 79 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNG-DNQWITTLHYAFQDENNLYLV 79 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhC-CCCCEeeEEEEEecCCEEEEE
Confidence 4799999999999999999999999999999998654322233345577888888887 799999999999999999999
Q ss_pred EeccCCCchHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCCCc
Q 042823 103 MELCEGGDLFDRIIA-KGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQ 181 (477)
Q Consensus 103 ~e~~~gg~L~~~l~~-~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~ 181 (477)
|||++||+|.+++.+ ...+++..++.++.||+.||.|||++||+||||||+||++ +.++.+||+|||++.......
T Consensus 80 ~ey~~~g~L~~~l~~~~~~l~~~~~~~~~~qi~~al~~lH~~~iiHrDlkp~Nili---~~~~~~kL~DfG~a~~~~~~~ 156 (332)
T cd05623 80 MDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILM---DMNGHIRLADFGSCLKLMEDG 156 (332)
T ss_pred EeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEE---CCCCCEEEeecchheecccCC
Confidence 999999999999987 4678999999999999999999999999999999999999 678899999999987653322
Q ss_pred c--eecccccccccchhhhh------hhcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCC-CCCCCC
Q 042823 182 V--YRDIVGSGFYIAPEVLR------RRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDT-DPWPSI 252 (477)
Q Consensus 182 ~--~~~~~gt~~y~aPE~~~------~~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~-~~~~~~ 252 (477)
. .....||+.|+|||++. +.++.++|||||||++|+|++|..||...+..+.+..+......+.. .....+
T Consensus 157 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~ 236 (332)
T cd05623 157 TVQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFPAQVTDV 236 (332)
T ss_pred cceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCHHHHHHHHhCCCccccCCCccccC
Confidence 2 22357999999999985 35788999999999999999999999988877777777665433221 123468
Q ss_pred CHHHHHHHHHhcccCccc--cCCHHHHhcCcccCcC
Q 042823 253 SSTAKDLVRRMLTKDPKR--RITAAQVLEHPWLRES 286 (477)
Q Consensus 253 ~~~~~~li~~~l~~dp~~--R~s~~~~l~h~~~~~~ 286 (477)
++++++||++||..+|.+ |+++.++++||||...
T Consensus 237 s~~~~~li~~ll~~~~~r~~r~~~~~~~~h~~f~~~ 272 (332)
T cd05623 237 SEDAKDLIRRLICSREHRLGQNGIEDFKQHPFFTGI 272 (332)
T ss_pred CHHHHHHHHHHccChhhhcCCCCHHHHhCCCCcCCC
Confidence 999999999999765544 6899999999999754
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw |
| >cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-46 Score=354.14 Aligned_cols=259 Identities=32% Similarity=0.487 Sum_probs=213.5
Q ss_pred cccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEE
Q 042823 24 HYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVVM 103 (477)
Q Consensus 24 ~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~lv~ 103 (477)
.|++.+.||+|+||.||+|.+..+++.||+|.+.............+.+|+.++..+ +||+|+.+++.+.+.+.+|+||
T Consensus 1 ~f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l-~~~~i~~~~~~~~~~~~~~lv~ 79 (285)
T cd05630 1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKV-NSRFVVSLAYAYETKDALCLVL 79 (285)
T ss_pred CceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhC-CCCCeeeeeEEEecCCEEEEEE
Confidence 477889999999999999999999999999998765433333345667899999999 7999999999999999999999
Q ss_pred eccCCCchHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCCCc
Q 042823 104 ELCEGGDLFDRIIAKG--YNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQ 181 (477)
Q Consensus 104 e~~~gg~L~~~l~~~~--~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~ 181 (477)
||++|++|.+++...+ .+++..+..++.|++.||.|||+.||+||||||+||++ +..+.++|+|||++.......
T Consensus 80 e~~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nil~---~~~~~~~l~Dfg~~~~~~~~~ 156 (285)
T cd05630 80 TLMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQERIVYRDLKPENILL---DDHGHIRISDLGLAVHVPEGQ 156 (285)
T ss_pred EecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEE---CCCCCEEEeeccceeecCCCc
Confidence 9999999998886543 58999999999999999999999999999999999998 677889999999987655444
Q ss_pred ceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCCCCHHHHHHH
Q 042823 182 VYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLV 260 (477)
Q Consensus 182 ~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li 260 (477)
......|++.|+|||++.+ .++.++||||+||++|+|++|.+||..........................+++++++|+
T Consensus 157 ~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 236 (285)
T cd05630 157 TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVQEEYSEKFSPDARSLC 236 (285)
T ss_pred cccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccchHHHHHhhhhhhhhhcCccCCHHHHHHH
Confidence 4345579999999999864 588999999999999999999999976543221111111111111122346789999999
Q ss_pred HHhcccCccccCC-----HHHHhcCcccCcC
Q 042823 261 RRMLTKDPKRRIT-----AAQVLEHPWLRES 286 (477)
Q Consensus 261 ~~~l~~dp~~R~s-----~~~~l~h~~~~~~ 286 (477)
.+||+.||++||| +.++++||||+..
T Consensus 237 ~~~l~~~p~~R~s~~~~~~~~~~~h~~~~~~ 267 (285)
T cd05630 237 KMLLCKDPKERLGCQGGGAREVKEHPLFKQI 267 (285)
T ss_pred HHHhhcCHHHccCCCCCchHHHHcChhhhcc
Confidence 9999999999999 9999999999753
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as |
| >KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-47 Score=364.67 Aligned_cols=270 Identities=26% Similarity=0.399 Sum_probs=235.0
Q ss_pred ccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCe
Q 042823 19 EDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETA 98 (477)
Q Consensus 19 ~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~ 98 (477)
++....|.=.+-||.|+||-||-|++..+...||||++.-..+-.......|..|++.++++ .|||++.+.++|-.+..
T Consensus 22 ~DPEklf~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l-~HPntieYkgCyLre~T 100 (948)
T KOG0577|consen 22 DDPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQL-RHPNTIEYKGCYLREHT 100 (948)
T ss_pred CCHHHHHHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhc-cCCCcccccceeeccch
Confidence 45556677789999999999999999999999999998766555556678899999999999 69999999999999999
Q ss_pred EEEEEeccCCCchHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCcccc
Q 042823 99 VHVVMELCEGGDLFDRIIA-KGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLF 177 (477)
Q Consensus 99 ~~lv~e~~~gg~L~~~l~~-~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~ 177 (477)
.|+|||||-| |-.|++.- .+++.+.+++.|+.+.+.||.|||+++.||||||..|||+ .+.+.|||+|||.|...
T Consensus 101 aWLVMEYClG-SAsDlleVhkKplqEvEIAAi~~gaL~gLaYLHS~~~IHRDiKAGNILL---se~g~VKLaDFGSAsi~ 176 (948)
T KOG0577|consen 101 AWLVMEYCLG-SASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNRIHRDIKAGNILL---SEPGLVKLADFGSASIM 176 (948)
T ss_pred HHHHHHHHhc-cHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhhHHhhhccccceEe---cCCCeeeeccccchhhc
Confidence 9999999976 77787754 4678999999999999999999999999999999999999 78999999999999887
Q ss_pred CCCcceecccccccccchhhhh----hhcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCCCC
Q 042823 178 EEGQVYRDIVGSGFYIAPEVLR----RRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSIS 253 (477)
Q Consensus 178 ~~~~~~~~~~gt~~y~aPE~~~----~~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 253 (477)
.+. ++++|||+|||||++. |+|+-++||||||++..+|.-.+||+...+....+.-|.++..+... .+.+|
T Consensus 177 ~PA---nsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAMSALYHIAQNesPtLq--s~eWS 251 (948)
T KOG0577|consen 177 APA---NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPTLQ--SNEWS 251 (948)
T ss_pred Cch---hcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHHHHHHHHHhcCCCCCC--CchhH
Confidence 664 4679999999999973 78999999999999999999999999998888888888777654322 24568
Q ss_pred HHHHHHHHHhcccCccccCCHHHHhcCcccCcCCCCCCchHHHHH
Q 042823 254 STAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASDDTSVILR 298 (477)
Q Consensus 254 ~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~~~~~~~~~~~~~ 298 (477)
..++.||..||++-|.+|||++++|.|+|+............+.+
T Consensus 252 ~~F~~Fvd~CLqKipqeRptse~ll~H~fv~R~Rp~tvi~dLIqR 296 (948)
T KOG0577|consen 252 DYFRNFVDSCLQKIPQERPTSEELLKHRFVLRERPPTVIMDLIQR 296 (948)
T ss_pred HHHHHHHHHHHhhCcccCCcHHHHhhcchhccCCCchHHHHHHHH
Confidence 999999999999999999999999999999876655443344443
|
|
| >cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-46 Score=363.33 Aligned_cols=249 Identities=28% Similarity=0.523 Sum_probs=215.9
Q ss_pred ccccccCCeEEEEEEE---ccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEec
Q 042823 29 RMLGRGQFGVSYLCTE---NSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVVMEL 105 (477)
Q Consensus 29 ~~iG~G~~g~V~~~~~---~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~lv~e~ 105 (477)
+.||+|+||.||++.+ ..+|+.||+|++.+... .........+|+.++.++ +||||+++++++..++.+|+||||
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~ 79 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATL-KVRDRVRTKMERDILAEV-NHPFIVKLHYAFQTEGKLYLILDF 79 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHh-hhhhHHHHHHHHHHHHhC-CCCCcccEEEEEEcCCEEEEEEcC
Confidence 6799999999999876 35789999999875422 122344567899999999 799999999999999999999999
Q ss_pred cCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCCC-ccee
Q 042823 106 CEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEG-QVYR 184 (477)
Q Consensus 106 ~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~-~~~~ 184 (477)
++||+|.+++.+...+++..+..++.||+.||.|||++||+||||||+||++ +.++.+||+|||++...... ....
T Consensus 80 ~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~---~~~~~~kL~Dfg~~~~~~~~~~~~~ 156 (318)
T cd05582 80 LRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILL---DEEGHIKLTDFGLSKESIDHEKKAY 156 (318)
T ss_pred CCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHeEE---CCCCcEEEeeccCCcccCCCCCcee
Confidence 9999999999888889999999999999999999999999999999999999 77788999999998765433 2334
Q ss_pred cccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCCCCHHHHHHHHHh
Q 042823 185 DIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRM 263 (477)
Q Consensus 185 ~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~ 263 (477)
...||+.|+|||++.+ .++.++|||||||++|+|++|..||...........+......++ +.+++.+.++|++|
T Consensus 157 ~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~i~~~~~~~p----~~~~~~~~~li~~~ 232 (318)
T cd05582 157 SFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKETMTMILKAKLGMP----QFLSPEAQSLLRAL 232 (318)
T ss_pred cccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCHHHHHHHHHcCCCCCC----CCCCHHHHHHHHHH
Confidence 5679999999999875 578999999999999999999999998887777777776655443 35789999999999
Q ss_pred cccCccccCC-----HHHHhcCcccCcC
Q 042823 264 LTKDPKRRIT-----AAQVLEHPWLRES 286 (477)
Q Consensus 264 l~~dp~~R~s-----~~~~l~h~~~~~~ 286 (477)
|+.||++||+ +.++++||||...
T Consensus 233 l~~~P~~R~~a~~~~~~~~~~~~~~~~~ 260 (318)
T cd05582 233 FKRNPANRLGAGPDGVEEIKRHPFFSTI 260 (318)
T ss_pred hhcCHhHcCCCCCCCHHHHhCCCCcCCC
Confidence 9999999999 7789999999764
|
Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate |
| >cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-46 Score=354.94 Aligned_cols=255 Identities=26% Similarity=0.416 Sum_probs=207.1
Q ss_pred cccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhcc--CCCCeeEEEEEEEe-----C
Q 042823 24 HYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLS--GQPNVVEFKSTYED-----E 96 (477)
Q Consensus 24 ~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~--~hpniv~~~~~~~~-----~ 96 (477)
+|++.+.||+|+||+||+|.++.+++.||+|.+....... .......+|+.++..+. +||||+++++++.. .
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~ 79 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNED-GLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRE 79 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCC-CCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCC
Confidence 5899999999999999999999999999999986543221 11233456777666653 69999999999864 3
Q ss_pred CeEEEEEeccCCCchHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCc
Q 042823 97 TAVHVVMELCEGGDLFDRIIAK--GYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSA 174 (477)
Q Consensus 97 ~~~~lv~e~~~gg~L~~~l~~~--~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a 174 (477)
..+++||||+.+ +|.+++... ..+++..+..++.|++.||.|||++|++||||||+||++ +.++.+||+|||++
T Consensus 80 ~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili---~~~~~~kl~dfg~~ 155 (288)
T cd07863 80 TKVTLVFEHVDQ-DLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILV---TSGGQVKLADFGLA 155 (288)
T ss_pred ceEEEEEccccc-CHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE---CCCCCEEECccCcc
Confidence 458999999975 888888764 348999999999999999999999999999999999999 77788999999999
Q ss_pred cccCCCcceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCc-----c-----
Q 042823 175 LLFEEGQVYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEI-----D----- 243 (477)
Q Consensus 175 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~-----~----- 243 (477)
.............||+.|+|||++.+ .++.++||||+||++|+|++|.+||.+.........+..... .
T Consensus 156 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (288)
T cd07863 156 RIYSCQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDV 235 (288)
T ss_pred ccccCcccCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHHHHHHHHHHhCCCChhhCcccc
Confidence 87654444445678999999999864 689999999999999999999999987766655544432110 0
Q ss_pred ------CC-------CCCCCCCCHHHHHHHHHhcccCccccCCHHHHhcCccc
Q 042823 244 ------FD-------TDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWL 283 (477)
Q Consensus 244 ------~~-------~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~ 283 (477)
+. ....+.+++.+.++|.+||+.||++|||+.+++.||||
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~hp~f 288 (288)
T cd07863 236 TLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQHPFF 288 (288)
T ss_pred cccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence 00 01124578899999999999999999999999999997
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou |
| >KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-48 Score=345.00 Aligned_cols=263 Identities=24% Similarity=0.373 Sum_probs=222.2
Q ss_pred ccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEE
Q 042823 21 VMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVH 100 (477)
Q Consensus 21 ~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~ 100 (477)
..+-|.++.+||+|+||.||+|.|+.+|+.+|+|.+... ....++..|+.++.+. +.|++|++|+.|-....++
T Consensus 31 PEEVFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~-----sDLQEIIKEISIMQQC-~S~yVVKYYGSYFK~sDLW 104 (502)
T KOG0574|consen 31 PEEVFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVD-----TDLQEIIKEISIMQQC-KSKYVVKYYGSYFKHSDLW 104 (502)
T ss_pred hHHHHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCcc-----chHHHHHHHHHHHHHc-CCchhhhhhhhhccCCceE
Confidence 345578999999999999999999999999999998654 3567889999999999 7999999999999999999
Q ss_pred EEEeccCCCchHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCC
Q 042823 101 VVMELCEGGDLFDRIIA-KGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEE 179 (477)
Q Consensus 101 lv~e~~~gg~L~~~l~~-~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~ 179 (477)
||||||..|++.+++.. ++.+++.++..+++..+.||+|||...-+|||||..|||+ +..+..||+|||.|..+..
T Consensus 105 IVMEYCGAGSiSDI~R~R~K~L~E~EIs~iL~~TLKGL~YLH~~~KIHRDIKAGNILL---NT~G~AKLADFGVAGQLTD 181 (502)
T KOG0574|consen 105 IVMEYCGAGSISDIMRARRKPLSEQEISAVLRDTLKGLQYLHDLKKIHRDIKAGNILL---NTDGIAKLADFGVAGQLTD 181 (502)
T ss_pred eehhhcCCCcHHHHHHHhcCCccHHHHHHHHHHHHhHHHHHHHHHHHHhhcccccEEE---cccchhhhhhccccchhhh
Confidence 99999999999999875 5679999999999999999999999999999999999999 8889999999999987754
Q ss_pred Cc-ceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCCCCHHHH
Q 042823 180 GQ-VYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAK 257 (477)
Q Consensus 180 ~~-~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 257 (477)
.- ..++.+|||.|||||++.. .|+.++||||||++..||..|++||..-.+...+..|-....+-- ......|.++-
T Consensus 182 TMAKRNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMRAIFMIPT~PPPTF-~KPE~WS~~F~ 260 (502)
T KOG0574|consen 182 TMAKRNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMRAIFMIPTKPPPTF-KKPEEWSSEFN 260 (502)
T ss_pred hHHhhCccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccccccceeEeccCCCCCCC-CChHhhhhHHH
Confidence 32 2356789999999999986 699999999999999999999999976544322222211111000 00123688999
Q ss_pred HHHHHhcccCccccCCHHHHhcCcccCcCCCCCCch
Q 042823 258 DLVRRMLTKDPKRRITAAQVLEHPWLRESGEASDDT 293 (477)
Q Consensus 258 ~li~~~l~~dp~~R~s~~~~l~h~~~~~~~~~~~~~ 293 (477)
+||++||.++|++|.|+.++++|||+++....+...
T Consensus 261 DFi~~CLiK~PE~R~TA~~L~~H~FiknA~g~~I~~ 296 (502)
T KOG0574|consen 261 DFIRSCLIKKPEERKTALRLCEHTFIKNAPGCDIMQ 296 (502)
T ss_pred HHHHHHhcCCHHHHHHHHHHhhhhhhcCCCcccHHH
Confidence 999999999999999999999999999877655433
|
|
| >PLN00034 mitogen-activated protein kinase kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-46 Score=364.11 Aligned_cols=258 Identities=25% Similarity=0.375 Sum_probs=209.8
Q ss_pred cccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeE
Q 042823 20 DVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAV 99 (477)
Q Consensus 20 ~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~ 99 (477)
....+|.+++.||+|+||.||+|.+..+++.||+|++.... .......+.+|+.++..+ +||||+++++++...+.+
T Consensus 71 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~ 147 (353)
T PLN00034 71 KSLSELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNH--EDTVRRQICREIEILRDV-NHPNVVKCHDMFDHNGEI 147 (353)
T ss_pred CCHHHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCC--cHHHHHHHHHHHHHHHhC-CCCCcceeeeEeccCCeE
Confidence 34567899999999999999999999999999999986432 223456788999999999 799999999999999999
Q ss_pred EEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCC
Q 042823 100 HVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEE 179 (477)
Q Consensus 100 ~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~ 179 (477)
|+|||||+||+|.+. ...++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++.....
T Consensus 148 ~lv~e~~~~~~L~~~----~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll---~~~~~~kL~DfG~~~~~~~ 220 (353)
T PLN00034 148 QVLLEFMDGGSLEGT----HIADEQFLADVARQILSGIAYLHRRHIVHRDIKPSNLLI---NSAKNVKIADFGVSRILAQ 220 (353)
T ss_pred EEEEecCCCCccccc----ccCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEE---cCCCCEEEcccccceeccc
Confidence 999999999998542 345788889999999999999999999999999999999 7788999999999876543
Q ss_pred Cc-ceecccccccccchhhhhh------hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCCC
Q 042823 180 GQ-VYRDIVGSGFYIAPEVLRR------RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSI 252 (477)
Q Consensus 180 ~~-~~~~~~gt~~y~aPE~~~~------~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 252 (477)
.. ......||..|+|||++.. ..+.++|||||||++|+|++|..||...........+..............+
T Consensus 221 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (353)
T PLN00034 221 TMDPCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGDWASLMCAICMSQPPEAPATA 300 (353)
T ss_pred ccccccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHhccCCCCCCCcc
Confidence 22 2344679999999998742 2356899999999999999999999743332222111111111122223468
Q ss_pred CHHHHHHHHHhcccCccccCCHHHHhcCcccCcCC
Q 042823 253 SSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESG 287 (477)
Q Consensus 253 ~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~~ 287 (477)
+.++++||.+||+.||++|||+.++++||||....
T Consensus 301 ~~~l~~li~~~l~~~P~~Rpt~~ell~hp~~~~~~ 335 (353)
T PLN00034 301 SREFRHFISCCLQREPAKRWSAMQLLQHPFILRAQ 335 (353)
T ss_pred CHHHHHHHHHHccCChhhCcCHHHHhcCcccccCC
Confidence 89999999999999999999999999999998764
|
|
| >KOG0586 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-47 Score=365.28 Aligned_cols=257 Identities=33% Similarity=0.571 Sum_probs=235.2
Q ss_pred ccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEE
Q 042823 21 VMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVH 100 (477)
Q Consensus 21 ~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~ 100 (477)
-..-|.+.+.||+|.|++|.+|++..|+..||+|++.+...... ....+.+|++++..| +|||||+++.+.+....+|
T Consensus 54 ~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~-~~~k~~rev~imk~l-~HPnIvkl~~v~~t~~~ly 131 (596)
T KOG0586|consen 54 SVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPS-KRQKLGREVDIMKSL-NHPNIVKLFSVIETEATLY 131 (596)
T ss_pred cccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChH-HHHHHHHHHHHHHhc-CCcceeeeeeeeeecceeE
Confidence 34569999999999999999999999999999999987655433 344588999999999 7999999999999999999
Q ss_pred EEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCCC
Q 042823 101 VVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEG 180 (477)
Q Consensus 101 lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~ 180 (477)
+||||+.||.+++++.++++..+..++.++.|+++|++|||+++|||||||++||++ +.+..+||+|||++..+..+
T Consensus 132 lV~eya~~ge~~~yl~~~gr~~e~~ar~~F~q~vsaveYcH~k~ivHrdLk~eNilL---~~~mnikIaDfgfS~~~~~~ 208 (596)
T KOG0586|consen 132 LVMEYASGGELFDYLVKHGRMKEKEARAKFRQIVSAVEYCHSKNIVHRDLKAENILL---DENMNIKIADFGFSTFFDYG 208 (596)
T ss_pred EEEEeccCchhHHHHHhcccchhhhhhhhhHHHHHHHHHHhhcceeccccchhhccc---ccccceeeeccccceeeccc
Confidence 999999999999999999999999999999999999999999999999999999999 77788999999999999988
Q ss_pred cceecccccccccchhhhhhh--cCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCCCCHHHHH
Q 042823 181 QVYRDIVGSGFYIAPEVLRRR--YGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKD 258 (477)
Q Consensus 181 ~~~~~~~gt~~y~aPE~~~~~--~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 258 (477)
....+++|++.|.|||++.+. -++.+|+||+|+++|-|+.|..||.+.+..+.-...+.+.+..+. .++.++.+
T Consensus 209 ~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~Lr~rvl~gk~rIp~----~ms~dce~ 284 (596)
T KOG0586|consen 209 LMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLKELRPRVLRGKYRIPF----YMSCDCED 284 (596)
T ss_pred ccccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCcccccccchheeeeecccc----eeechhHH
Confidence 888999999999999999863 588999999999999999999999998888877777777766543 57889999
Q ss_pred HHHHhcccCccccCCHHHHhcCcccCcC
Q 042823 259 LVRRMLTKDPKRRITAAQVLEHPWLRES 286 (477)
Q Consensus 259 li~~~l~~dp~~R~s~~~~l~h~~~~~~ 286 (477)
+|+++|..+|.+|+++++++.|.|+...
T Consensus 285 lLrk~lvl~Pskr~~~dqim~~~W~n~~ 312 (596)
T KOG0586|consen 285 LLRKFLVLNPSKRGPCDQIMKDRWRNDL 312 (596)
T ss_pred HHHHhhccCccccCCHHHhhhhcccchh
Confidence 9999999999999999999999998654
|
|
| >PHA03212 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-46 Score=367.75 Aligned_cols=252 Identities=21% Similarity=0.346 Sum_probs=206.3
Q ss_pred cccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEE
Q 042823 22 MLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHV 101 (477)
Q Consensus 22 ~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~l 101 (477)
..+|.+.+.||+|+||.||+|.+..+++.||+|.... ..+.+|++++..+ +||||++++++|..+...++
T Consensus 91 ~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~~---------~~~~~E~~il~~l-~HpnIv~~~~~~~~~~~~~l 160 (391)
T PHA03212 91 KAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQR---------GGTATEAHILRAI-NHPSIIQLKGTFTYNKFTCL 160 (391)
T ss_pred cCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechhh---------hhhHHHHHHHHhC-CCCCCCCEeEEEEECCeeEE
Confidence 4579999999999999999999999999999996431 2457899999999 79999999999999999999
Q ss_pred EEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCCC-
Q 042823 102 VMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEG- 180 (477)
Q Consensus 102 v~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~- 180 (477)
|||++. ++|..++.....+++..+..++.||+.||.|||++||+||||||+||++ +..+.+||+|||+|......
T Consensus 161 v~e~~~-~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~ylH~~~IvHrDiKP~NIll---~~~~~vkL~DFG~a~~~~~~~ 236 (391)
T PHA03212 161 ILPRYK-TDLYCYLAAKRNIAICDILAIERSVLRAIQYLHENRIIHRDIKAENIFI---NHPGDVCLGDFGAACFPVDIN 236 (391)
T ss_pred EEecCC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHhEEE---cCCCCEEEEeCCccccccccc
Confidence 999995 6899999888889999999999999999999999999999999999999 67788999999998653221
Q ss_pred -cceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCCh-------hhHHHHHHcCC----------
Q 042823 181 -QVYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETK-------KGTYDAILQGE---------- 241 (477)
Q Consensus 181 -~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~-------~~~~~~i~~~~---------- 241 (477)
.......||+.|+|||++.+ .++.++|||||||++|+|++|..||..... ...+..+....
T Consensus 237 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~ 316 (391)
T PHA03212 237 ANKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPID 316 (391)
T ss_pred ccccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCcc
Confidence 22335689999999999864 689999999999999999999988754321 11111111100
Q ss_pred ----------------c--cCCCCCC---CCCCHHHHHHHHHhcccCccccCCHHHHhcCcccCcCC
Q 042823 242 ----------------I--DFDTDPW---PSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESG 287 (477)
Q Consensus 242 ----------------~--~~~~~~~---~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~~ 287 (477)
. ....+.| ..++.++.+||.+||+.||.+|||+.++|+||||+...
T Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~hp~f~~~~ 383 (391)
T PHA03212 317 AQANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLDFAAFQDIP 383 (391)
T ss_pred hhHHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhcChhhccCC
Confidence 0 0000111 13467899999999999999999999999999998643
|
|
| >KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-46 Score=355.49 Aligned_cols=261 Identities=23% Similarity=0.318 Sum_probs=225.0
Q ss_pred CcCCCCCccccccccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCC
Q 042823 6 SKNQRDPILGKAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPN 85 (477)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpn 85 (477)
..|++.+....+++.-...+.+++.||+|-||.||+|.++. ...||+|.++... ...+.+.+|++++++| .|++
T Consensus 189 ~~p~~~~~~~d~wei~r~~l~l~~~LG~G~FG~V~~g~~~~-~~~vavk~ik~~~----m~~~~f~~Ea~iMk~L-~H~~ 262 (468)
T KOG0197|consen 189 TKPQTPDLARDPWEIPREELKLIRELGSGQFGEVWLGKWNG-STKVAVKTIKEGS----MSPEAFLREAQIMKKL-RHEK 262 (468)
T ss_pred CCCCCCccccCCeeecHHHHHHHHHhcCCccceEEEEEEcC-CCcccceEEeccc----cChhHHHHHHHHHHhC-cccC
Confidence 55776667688888888899999999999999999999853 3479999987542 2235677999999999 6999
Q ss_pred eeEEEEEEEeCCeEEEEEeccCCCchHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCC
Q 042823 86 VVEFKSTYEDETAVHVVMELCEGGDLFDRIIA--KGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDN 163 (477)
Q Consensus 86 iv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~--~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~ 163 (477)
||++++++..+..+||||||++.|+|.++|.. .+.+...+...++.||++|++||+++++|||||-..|||+ +++
T Consensus 263 lV~l~gV~~~~~piyIVtE~m~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~~~IHRDLAARNiLV---~~~ 339 (468)
T KOG0197|consen 263 LVKLYGVCTKQEPIYIVTEYMPKGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESKNYIHRDLAARNILV---DED 339 (468)
T ss_pred eEEEEEEEecCCceEEEEEecccCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhCCccchhhhhhheee---ccC
Confidence 99999999998899999999999999999997 5678999999999999999999999999999999999999 888
Q ss_pred CCEEEeecCCccccCCCcceeccc--ccccccchhhhh-hhcCCccchHhHHHHHHHHhh-CCCCCCCCChhhHHHHHHc
Q 042823 164 ALLKVTDFGSALLFEEGQVYRDIV--GSGFYIAPEVLR-RRYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQ 239 (477)
Q Consensus 164 ~~~kl~Dfg~a~~~~~~~~~~~~~--gt~~y~aPE~~~-~~~~~~~DiwslG~il~~l~t-g~~pf~~~~~~~~~~~i~~ 239 (477)
..+||+|||+|+...++......- -...|.|||.+. +.++.++|||||||+||||+| |+.|+.+.+..+.++.+.+
T Consensus 340 ~~vKIsDFGLAr~~~d~~Y~~~~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~ev~~~le~ 419 (468)
T KOG0197|consen 340 LVVKISDFGLARLIGDDEYTASEGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNEEVLELLER 419 (468)
T ss_pred ceEEEcccccccccCCCceeecCCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCHHHHHHHHhc
Confidence 899999999999654443322211 134599999986 679999999999999999999 9999999999999999988
Q ss_pred CCccCCCCCCCCCCHHHHHHHHHhcccCccccCCHHHHh
Q 042823 240 GEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVL 278 (477)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l 278 (477)
|.-- +. .+.+|+++.+++..||+.+|++|||++.+.
T Consensus 420 GyRl-p~--P~~CP~~vY~lM~~CW~~~P~~RPtF~~L~ 455 (468)
T KOG0197|consen 420 GYRL-PR--PEGCPDEVYELMKSCWHEDPEDRPTFETLR 455 (468)
T ss_pred cCcC-CC--CCCCCHHHHHHHHHHhhCCcccCCCHHHHH
Confidence 7532 22 257999999999999999999999998654
|
|
| >cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.2e-46 Score=364.57 Aligned_cols=261 Identities=24% Similarity=0.396 Sum_probs=210.4
Q ss_pred ccccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeC
Q 042823 17 AYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDE 96 (477)
Q Consensus 17 ~~~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~ 96 (477)
....+.++|++.+.||+|+||.||+|.+..+|+.||+|++..... .......+.+|+.++..+ +||||+++++++...
T Consensus 15 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~ 92 (359)
T cd07876 15 STFTVLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQ-NQTHAKRAYRELVLLKCV-NHKNIISLLNVFTPQ 92 (359)
T ss_pred hhhhhhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEeccccc-chhHHHHHHHHHHHHHhC-CCCCEeeeeeeeccC
Confidence 334678899999999999999999999999999999999865432 223455677899999999 799999999998654
Q ss_pred C------eEEEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEee
Q 042823 97 T------AVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTD 170 (477)
Q Consensus 97 ~------~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~D 170 (477)
. .+|+||||+.+ +|.+.+. ..+++..+..++.|++.||.|||++||+||||||+||++ +.++.+||+|
T Consensus 93 ~~~~~~~~~~lv~e~~~~-~l~~~~~--~~~~~~~~~~~~~qi~~~L~~LH~~~ivHrDlkp~NIl~---~~~~~~kl~D 166 (359)
T cd07876 93 KSLEEFQDVYLVMELMDA-NLCQVIH--MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV---KSDCTLKILD 166 (359)
T ss_pred CCccccceeEEEEeCCCc-CHHHHHh--ccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEE---CCCCCEEEec
Confidence 3 57999999976 6666664 347899999999999999999999999999999999999 7788999999
Q ss_pred cCCccccCCCcceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHc----------
Q 042823 171 FGSALLFEEGQVYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQ---------- 239 (477)
Q Consensus 171 fg~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~---------- 239 (477)
||++.............||+.|+|||++.+ .++.++|||||||++|+|++|..||.+.+....+..+..
T Consensus 167 fg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 246 (359)
T cd07876 167 FGLARTACTNFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFM 246 (359)
T ss_pred CCCccccccCccCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCcHHHH
Confidence 999976544444455678999999999875 689999999999999999999999987654433322211
Q ss_pred ------------CCccCCC----------------CCCCCCCHHHHHHHHHhcccCccccCCHHHHhcCcccCc
Q 042823 240 ------------GEIDFDT----------------DPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRE 285 (477)
Q Consensus 240 ------------~~~~~~~----------------~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~ 285 (477)
....++. ......++.+++||.+||+.||++|||+.++|+||||..
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~ 320 (359)
T cd07876 247 NRLQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRHPYITV 320 (359)
T ss_pred HHHHHHHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhcCchhhh
Confidence 1100000 000124678999999999999999999999999999974
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn |
| >KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-47 Score=368.94 Aligned_cols=260 Identities=27% Similarity=0.409 Sum_probs=225.7
Q ss_pred cccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeE
Q 042823 20 DVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAV 99 (477)
Q Consensus 20 ~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~ 99 (477)
...+.|.|+.-||.|+||.||+|+++.++...|.|+|..+ ...+...+.-||.|+..+ +||+||++++.|..++.+
T Consensus 29 nP~d~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetk---seEELEDylVEIeILa~C-dHP~ivkLl~ayy~enkL 104 (1187)
T KOG0579|consen 29 NPRDHWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETK---SEEELEDYLVEIEILAEC-DHPVIVKLLSAYYFENKL 104 (1187)
T ss_pred CHHHHHHHHhhhcCccchhhhhhhcccchhhhhhhhhccc---chhHHhhhhhhhhhhhcC-CChHHHHHHHHHhccCce
Confidence 4567789999999999999999999999988899988543 345678888999999998 799999999999999999
Q ss_pred EEEEeccCCCchHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccC
Q 042823 100 HVVMELCEGGDLFDRIIA-KGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFE 178 (477)
Q Consensus 100 ~lv~e~~~gg~L~~~l~~-~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~ 178 (477)
+|+.|||.||-+-.++.. ...+++.++..+++|+|.||+|||+++|||||||..|||+ .-+|.|+|+|||.+....
T Consensus 105 wiliEFC~GGAVDaimlEL~r~LtE~QIqvvc~q~ldALn~LHs~~iIHRDLKAGNiL~---TldGdirLADFGVSAKn~ 181 (1187)
T KOG0579|consen 105 WILIEFCGGGAVDAIMLELGRVLTEDQIQVVCYQVLDALNWLHSQNIIHRDLKAGNILL---TLDGDIRLADFGVSAKNK 181 (1187)
T ss_pred EEEEeecCCchHhHHHHHhccccchHHHHHHHHHHHHHHHHHhhcchhhhhccccceEE---EecCcEeeecccccccch
Confidence 999999999988777766 4568999999999999999999999999999999999999 556779999999876543
Q ss_pred CC-cceecccccccccchhhhh------hhcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCC
Q 042823 179 EG-QVYRDIVGSGFYIAPEVLR------RRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPS 251 (477)
Q Consensus 179 ~~-~~~~~~~gt~~y~aPE~~~------~~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 251 (477)
.. ....+++|||||||||+.. .+|+.++||||||++|.+|..+.||....+...++.+|.+...+-...+ ..
T Consensus 182 ~t~qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnpMRVllKiaKSePPTLlqP-S~ 260 (1187)
T KOG0579|consen 182 STRQKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTLLQP-SH 260 (1187)
T ss_pred hHHhhhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccchHHHHHHHhhcCCCcccCc-ch
Confidence 22 2345789999999999863 4699999999999999999999999998888888888877665432222 35
Q ss_pred CCHHHHHHHHHhcccCccccCCHHHHhcCcccCcCC
Q 042823 252 ISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESG 287 (477)
Q Consensus 252 ~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~~ 287 (477)
+|..+.+|+++||.+||..||+++++|+|||+.+..
T Consensus 261 Ws~~F~DfLk~cL~Knp~~Rp~aaqll~Hpfv~~~~ 296 (1187)
T KOG0579|consen 261 WSRSFSDFLKRCLVKNPRNRPPAAQLLKHPFVQNAP 296 (1187)
T ss_pred hhhHHHHHHHHHHhcCCccCCCHHHHhhCcccccCC
Confidence 788999999999999999999999999999998654
|
|
| >cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-45 Score=349.76 Aligned_cols=249 Identities=28% Similarity=0.472 Sum_probs=206.4
Q ss_pred ccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEeccCCCc
Q 042823 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVVMELCEGGD 110 (477)
Q Consensus 31 iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~lv~e~~~gg~ 110 (477)
||+|+||.||+|.++.+|+.||+|.+................|+.++..+ +||||++++++++.+..+|+||||++||+
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~i~~~~~~~~~~~~~~lv~e~~~g~~ 79 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKV-NSPFIVNLAYAFESKTHLCLVMSLMNGGD 79 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhc-CCCcEEEEEEEEecCCeEEEEEecCCCCC
Confidence 79999999999999999999999998654322222334456799999999 79999999999999999999999999999
Q ss_pred hHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCCCcceecccc
Q 042823 111 LFDRIIAKG--YNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVG 188 (477)
Q Consensus 111 L~~~l~~~~--~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~g 188 (477)
|.+++...+ .+++..+..++.|++.||.|||+.|++||||||+||++ +.++.++|+|||++.............|
T Consensus 80 L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili---~~~~~~~l~Dfg~~~~~~~~~~~~~~~~ 156 (277)
T cd05607 80 LKYHIYNVGERGLEMERVIHYSAQITCGILHLHSMDIVYRDMKPENVLL---DDQGNCRLSDLGLAVELKDGKTITQRAG 156 (277)
T ss_pred HHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEEEccCChHhEEE---cCCCCEEEeeceeeeecCCCceeeccCC
Confidence 988886543 47888899999999999999999999999999999999 6788899999999887655444445678
Q ss_pred cccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChh----hHHHHHHcCCccCCCCCCCCCCHHHHHHHHHh
Q 042823 189 SGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKK----GTYDAILQGEIDFDTDPWPSISSTAKDLVRRM 263 (477)
Q Consensus 189 t~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~----~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~ 263 (477)
++.|+|||++.+ .++.++||||+||++|+|++|..||...... ............. ....++++++++|.+|
T Consensus 157 ~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~li~~~ 233 (277)
T cd05607 157 TNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEELKRRTLEDEVKF---EHQNFTEESKDICRLF 233 (277)
T ss_pred CCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhhHHHHHHHhhcccccc---ccccCCHHHHHHHHHH
Confidence 999999999864 5899999999999999999999999764332 2223333322222 1246799999999999
Q ss_pred cccCccccCCH----HHHhcCcccCcC
Q 042823 264 LTKDPKRRITA----AQVLEHPWLRES 286 (477)
Q Consensus 264 l~~dp~~R~s~----~~~l~h~~~~~~ 286 (477)
|+.||++||++ +++++||||+..
T Consensus 234 L~~~P~~R~~~~~~~~~~~~h~~f~~~ 260 (277)
T cd05607 234 LAKKPEDRLGSREKNDDPRKHEFFKTI 260 (277)
T ss_pred hccCHhhCCCCccchhhhhcChhhcCC
Confidence 99999999999 778899999753
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr |
| >cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.2e-46 Score=357.13 Aligned_cols=259 Identities=26% Similarity=0.424 Sum_probs=213.1
Q ss_pred cccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEE
Q 042823 22 MLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHV 101 (477)
Q Consensus 22 ~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~l 101 (477)
.++|.+.+.||+|+||.||+|+++.+++.||+|.+...... .......+|+.++..+ +||||+++++++..++..|+
T Consensus 5 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~l 81 (309)
T cd07872 5 METYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEE--GAPCTAIREVSLLKDL-KHANIVTLHDIVHTDKSLTL 81 (309)
T ss_pred CCceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccC--CcchhHHHHHHHHHhC-CCCCcceEEEEEeeCCeEEE
Confidence 46899999999999999999999999999999998654321 2233566899999999 79999999999999999999
Q ss_pred EEeccCCCchHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCCC
Q 042823 102 VMELCEGGDLFDRIIAKG-YNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEG 180 (477)
Q Consensus 102 v~e~~~gg~L~~~l~~~~-~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~ 180 (477)
||||+++ +|.+++...+ .+++..+..++.||+.||.|||++||+||||||+||++ +..+.+||+|||++......
T Consensus 82 v~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~dlkp~Nill---~~~~~~kl~Dfg~~~~~~~~ 157 (309)
T cd07872 82 VFEYLDK-DLKQYMDDCGNIMSMHNVKIFLYQILRGLAYCHRRKVLHRDLKPQNLLI---NERGELKLADFGLARAKSVP 157 (309)
T ss_pred EEeCCCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE---CCCCCEEECccccceecCCC
Confidence 9999976 8888887654 57899999999999999999999999999999999999 67789999999998754322
Q ss_pred -cceecccccccccchhhhhh--hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCc---------------
Q 042823 181 -QVYRDIVGSGFYIAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEI--------------- 242 (477)
Q Consensus 181 -~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~--------------- 242 (477)
.......+|+.|+|||++.+ .++.++||||+||++|+|+||.+||.+.+..+....+.....
T Consensus 158 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (309)
T cd07872 158 TKTYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGISSNDE 237 (309)
T ss_pred ccccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhhcchhh
Confidence 22234568999999999864 578999999999999999999999987765554443332110
Q ss_pred ----cCCC-------CCCCCCCHHHHHHHHHhcccCccccCCHHHHhcCcccCcCC
Q 042823 243 ----DFDT-------DPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESG 287 (477)
Q Consensus 243 ----~~~~-------~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~~ 287 (477)
.++. ...+.++++++++|.+||+.||.+|||+.++++||||+...
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~~~~~~ 293 (309)
T cd07872 238 FKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMKHAYFRSLG 293 (309)
T ss_pred hhhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhcChhhhhcc
Confidence 0000 11235788999999999999999999999999999998654
|
Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play |
| >PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-46 Score=350.25 Aligned_cols=254 Identities=35% Similarity=0.617 Sum_probs=213.4
Q ss_pred ccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEe
Q 042823 25 YFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVVME 104 (477)
Q Consensus 25 Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~lv~e 104 (477)
|++++.||+|+||+||+|.+..+++.||+|++....... .......+|+.++.++ +||||+++++++......++|||
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~-~~~~~~~~e~~~~~~l-~~~~i~~~~~~~~~~~~~~~v~~ 78 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEE-EEREENIREIKILRRL-RHPNIVQILDVFQDDNYLYIVME 78 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHH-HHHHHHHHHHHHHHHH-TBTTBCHEEEEEEESSEEEEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccc-cccchhhhhhhccccc-ccccccccccccccccccccccc
Confidence 889999999999999999999999999999997654322 2222345699999999 79999999999999999999999
Q ss_pred ccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCcccc-CCCcce
Q 042823 105 LCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLF-EEGQVY 183 (477)
Q Consensus 105 ~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~-~~~~~~ 183 (477)
|+.+++|.+++...+.+++.++..++.|++.||.+||++|++||||||+||++ +.++.++|+|||.+... ......
T Consensus 79 ~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~Lh~~~i~H~dikp~NIl~---~~~~~~~l~Dfg~~~~~~~~~~~~ 155 (260)
T PF00069_consen 79 YCPGGSLQDYLQKNKPLSEEEILKIAYQILEALAYLHSKGIVHRDIKPENILL---DENGEVKLIDFGSSVKLSENNENF 155 (260)
T ss_dssp EETTEBHHHHHHHHSSBBHHHHHHHHHHHHHHHHHHHHTTEEESSBSGGGEEE---STTSEEEESSGTTTEESTSTTSEB
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccc---cccccccccccccccccccccccc
Confidence 99999999999988889999999999999999999999999999999999999 77889999999998753 333344
Q ss_pred ecccccccccchhhhh--hhcCCccchHhHHHHHHHHhhCCCCCCCCCh---hhHHHHHHcCCccCCCCCCCCCCHHHHH
Q 042823 184 RDIVGSGFYIAPEVLR--RRYGKEIDIWSAGVILYILLSGVPPFWAETK---KGTYDAILQGEIDFDTDPWPSISSTAKD 258 (477)
Q Consensus 184 ~~~~gt~~y~aPE~~~--~~~~~~~DiwslG~il~~l~tg~~pf~~~~~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 258 (477)
....+++.|+|||++. ..++.++||||||+++|+|++|..||..... ..................+...++.+.+
T Consensus 156 ~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 235 (260)
T PF00069_consen 156 NPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQLEIIEKILKRPLPSSSQQSREKSEELRD 235 (260)
T ss_dssp SSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHHHHHHHHTHHHHHTTSHTTSHHHHHH
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccccccchhHHHHHH
Confidence 5668899999999987 4689999999999999999999999987632 2233333332222222222233489999
Q ss_pred HHHHhcccCccccCCHHHHhcCccc
Q 042823 259 LVRRMLTKDPKRRITAAQVLEHPWL 283 (477)
Q Consensus 259 li~~~l~~dp~~R~s~~~~l~h~~~ 283 (477)
+|.+||+.||++|||+.++++||||
T Consensus 236 li~~~l~~~p~~R~~~~~l~~~~~~ 260 (260)
T PF00069_consen 236 LIKKMLSKDPEQRPSAEELLKHPWF 260 (260)
T ss_dssp HHHHHSSSSGGGSTTHHHHHTSGGG
T ss_pred HHHHHccCChhHCcCHHHHhcCCCC
Confidence 9999999999999999999999997
|
Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A .... |
| >KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-47 Score=339.20 Aligned_cols=263 Identities=30% Similarity=0.528 Sum_probs=239.4
Q ss_pred ccccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeC
Q 042823 17 AYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDE 96 (477)
Q Consensus 17 ~~~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~ 96 (477)
....-+++|.+.++||+|.||.|-+|+.+.+++.||+|++++.......+...-..|-+++... .||.+..+...|+..
T Consensus 162 ~~kvTm~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~-~HPFLt~LKYsFQt~ 240 (516)
T KOG0690|consen 162 KNKVTMEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNC-RHPFLTSLKYSFQTQ 240 (516)
T ss_pred cceeccchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhc-cCcHHHHhhhhhccC
Confidence 3345678899999999999999999999999999999999887666656666667788888888 699999999999999
Q ss_pred CeEEEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccc
Q 042823 97 TAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALL 176 (477)
Q Consensus 97 ~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~ 176 (477)
..+|+||||..||.|+-.|.+...+++..++.+...|++||.|||+.+||.||||.+|+|+ +.+|++||+|||+++.
T Consensus 241 drlCFVMeyanGGeLf~HLsrer~FsE~RtRFYGaEIvsAL~YLHs~~ivYRDlKLENLlL---DkDGHIKitDFGLCKE 317 (516)
T KOG0690|consen 241 DRLCFVMEYANGGELFFHLSRERVFSEDRTRFYGAEIVSALGYLHSRNIVYRDLKLENLLL---DKDGHIKITDFGLCKE 317 (516)
T ss_pred ceEEEEEEEccCceEeeehhhhhcccchhhhhhhHHHHHHhhhhhhCCeeeeechhhhhee---ccCCceEeeecccchh
Confidence 9999999999999999999999999999999999999999999999999999999999999 8999999999999875
Q ss_pred -cCCCcceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCCCCH
Q 042823 177 -FEEGQVYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISS 254 (477)
Q Consensus 177 -~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 254 (477)
+..+....+++|||.|+|||++.. .|+.++|.|.+||++|||++|+.||+.......+..|+-....|+. .+|+
T Consensus 318 ~I~~g~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~kLFeLIl~ed~kFPr----~ls~ 393 (516)
T KOG0690|consen 318 EIKYGDTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHEKLFELILMEDLKFPR----TLSP 393 (516)
T ss_pred cccccceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccchhHHHHHHHhhhccCCc----cCCH
Confidence 345566778999999999999974 6999999999999999999999999999999999999999888875 6899
Q ss_pred HHHHHHHHhcccCccccC-----CHHHHhcCcccCcCC
Q 042823 255 TAKDLVRRMLTKDPKRRI-----TAAQVLEHPWLRESG 287 (477)
Q Consensus 255 ~~~~li~~~l~~dp~~R~-----s~~~~l~h~~~~~~~ 287 (477)
+++.|+..+|.+||.+|. .+.++.+|+||....
T Consensus 394 eAktLLsGLL~kdP~kRLGgGpdDakEi~~h~FF~~v~ 431 (516)
T KOG0690|consen 394 EAKTLLSGLLKKDPKKRLGGGPDDAKEIMRHRFFASVD 431 (516)
T ss_pred HHHHHHHHHhhcChHhhcCCCchhHHHHHhhhhhccCC
Confidence 999999999999999997 489999999998653
|
|
| >cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-45 Score=349.80 Aligned_cols=259 Identities=31% Similarity=0.487 Sum_probs=217.2
Q ss_pred cccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEE
Q 042823 24 HYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVVM 103 (477)
Q Consensus 24 ~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~lv~ 103 (477)
.|+..+.||+|+||+||+|.+..+++.||+|.+.............+.+|+.+++.+ +||||+.+++++..++..|+||
T Consensus 1 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l-~~~~i~~~~~~~~~~~~~~lv~ 79 (285)
T cd05632 1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKV-NSQFVVNLAYAYETKDALCLVL 79 (285)
T ss_pred CceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHc-CCcCceeEEEEEecCCEEEEEE
Confidence 377889999999999999999999999999998654332233345567899999999 7999999999999999999999
Q ss_pred eccCCCchHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCCCc
Q 042823 104 ELCEGGDLFDRIIAK--GYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQ 181 (477)
Q Consensus 104 e~~~gg~L~~~l~~~--~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~ 181 (477)
||+++++|.+.+... ..+++..+..++.|++.||.|||+.||+||||||+||++ +..+.+||+|||++.......
T Consensus 80 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~iiH~dikp~Nili---~~~~~~kl~Dfg~~~~~~~~~ 156 (285)
T cd05632 80 TIMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRENTVYRDLKPENILL---DDYGHIRISDLGLAVKIPEGE 156 (285)
T ss_pred EeccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEE---CCCCCEEEecCCcceecCCCC
Confidence 999999998888653 368999999999999999999999999999999999999 677889999999987654433
Q ss_pred ceecccccccccchhhhh-hhcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCCCCHHHHHHH
Q 042823 182 VYRDIVGSGFYIAPEVLR-RRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLV 260 (477)
Q Consensus 182 ~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li 260 (477)
......|++.|+|||++. ..++.++|+||+||++|+|++|..||...........+............+.+++++.+|+
T Consensus 157 ~~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 236 (285)
T cd05632 157 SIRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREEVDRRVLETEEVYSAKFSEEAKSIC 236 (285)
T ss_pred cccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhhccccccCccCCHHHHHHH
Confidence 334567899999999986 4588999999999999999999999987665444444433222222233356889999999
Q ss_pred HHhcccCccccCC-----HHHHhcCcccCcC
Q 042823 261 RRMLTKDPKRRIT-----AAQVLEHPWLRES 286 (477)
Q Consensus 261 ~~~l~~dp~~R~s-----~~~~l~h~~~~~~ 286 (477)
.+||+.||++||+ +.++++|+||+..
T Consensus 237 ~~~l~~~P~~R~~~~~~~~~~l~~~~~~~~~ 267 (285)
T cd05632 237 KMLLTKDPKQRLGCQEEGAGEVKRHPFFRNM 267 (285)
T ss_pred HHHccCCHhHcCCCcccChHHHHcChhhhcC
Confidence 9999999999999 8999999999875
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with |
| >cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-45 Score=362.95 Aligned_cols=262 Identities=24% Similarity=0.398 Sum_probs=213.3
Q ss_pred cccccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEe
Q 042823 16 KAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYED 95 (477)
Q Consensus 16 ~~~~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~ 95 (477)
.....+.++|++.+.||+|+||.||+|.+..+++.||+|++..... .......+.+|+.+++.+ +||||+++++++..
T Consensus 17 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~~ii~~~~~~~~ 94 (364)
T cd07875 17 DSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQ-NQTHAKRAYRELVLMKCV-NHKNIIGLLNVFTP 94 (364)
T ss_pred cchhchhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCcccc-CchhHHHHHHHHHHHHhc-CCCCccccceeecc
Confidence 3445678899999999999999999999999999999999865322 223345677899999888 79999999998854
Q ss_pred C------CeEEEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEe
Q 042823 96 E------TAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVT 169 (477)
Q Consensus 96 ~------~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~ 169 (477)
. ..+|+||||+++ +|.+.+.. .+++..+..++.|++.||.|||++||+||||||+||++ +.++.+||+
T Consensus 95 ~~~~~~~~~~~lv~e~~~~-~l~~~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll---~~~~~~kL~ 168 (364)
T cd07875 95 QKSLEEFQDVYIVMELMDA-NLCQVIQM--ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV---KSDCTLKIL 168 (364)
T ss_pred cccccccCeEEEEEeCCCC-CHHHHHHh--cCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEE---CCCCcEEEE
Confidence 3 457999999976 77777653 47889999999999999999999999999999999999 678899999
Q ss_pred ecCCccccCCCcceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCcc-----
Q 042823 170 DFGSALLFEEGQVYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEID----- 243 (477)
Q Consensus 170 Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~----- 243 (477)
|||++.............||+.|+|||++.+ .++.++|||||||++|+|++|..||.+.+....+..+......
T Consensus 169 DfG~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 248 (364)
T cd07875 169 DFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEF 248 (364)
T ss_pred eCCCccccCCCCcccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHH
Confidence 9999987655444455689999999999875 5889999999999999999999999887765555544331100
Q ss_pred -----------------C----------------CCCCCCCCCHHHHHHHHHhcccCccccCCHHHHhcCcccCc
Q 042823 244 -----------------F----------------DTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRE 285 (477)
Q Consensus 244 -----------------~----------------~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~ 285 (477)
+ ........++.+++||.+||+.||.+|||+.++|+||||..
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~hp~~~~ 323 (364)
T cd07875 249 MKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINV 323 (364)
T ss_pred HHhhhHHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhcCccccc
Confidence 0 00001123568899999999999999999999999999964
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn |
| >cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-45 Score=356.68 Aligned_cols=260 Identities=24% Similarity=0.348 Sum_probs=214.4
Q ss_pred ccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEE
Q 042823 21 VMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVH 100 (477)
Q Consensus 21 ~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~ 100 (477)
..++|++.+.||+|+||.||+|.+..++..+|+|++.... .......+.+|++++..+ +||||+++++++.+++.+|
T Consensus 3 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~ 79 (333)
T cd06650 3 KDDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEI--KPAIRNQIIRELQVLHEC-NSPYIVGFYGAFYSDGEIS 79 (333)
T ss_pred chhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeeccc--CHHHHHHHHHHHHHHHHC-CCCcccceeEEEEECCEEE
Confidence 3578999999999999999999999999999999886542 223456788999999999 7999999999999999999
Q ss_pred EEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHc-CCeeccCCCCceeeeecCCCCCEEEeecCCccccCC
Q 042823 101 VVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSM-GVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEE 179 (477)
Q Consensus 101 lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~-~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~ 179 (477)
+||||++||+|.+++...+.+++..+..++.|++.||.|||+. +++||||||+||++ +..+.+||+|||++.....
T Consensus 80 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~ivH~dlkp~Nili---~~~~~~kL~Dfg~~~~~~~ 156 (333)
T cd06650 80 ICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILV---NSRGEIKLCDFGVSGQLID 156 (333)
T ss_pred EEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCChhhEEE---cCCCCEEEeeCCcchhhhh
Confidence 9999999999999999888899999999999999999999985 79999999999999 6778899999999875532
Q ss_pred Ccceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHc---CC--------------
Q 042823 180 GQVYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQ---GE-------------- 241 (477)
Q Consensus 180 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~---~~-------------- 241 (477)
. ......||+.|+|||++.+ .++.++|||||||++|+|++|..||...........+.. +.
T Consensus 157 ~-~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (333)
T cd06650 157 S-MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPPDAKELELMFGCPVEGDPAESETSPRPRPPG 235 (333)
T ss_pred h-ccccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcchhHHHHHhcCcccCCccccccCcccCCcc
Confidence 2 2234578999999999875 588999999999999999999999976543322211100 00
Q ss_pred -----------------------ccCCCC--CCCCCCHHHHHHHHHhcccCccccCCHHHHhcCcccCcCC
Q 042823 242 -----------------------IDFDTD--PWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESG 287 (477)
Q Consensus 242 -----------------------~~~~~~--~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~~ 287 (477)
.....+ .....+.++++||.+||++||++|||+.+++.||||+...
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~Rpt~~ell~h~~~~~~~ 306 (333)
T cd06650 236 RPLSSYGPDSRPPMAIFELLDYIVNEPPPKLPSGVFGAEFQDFVNKCLIKNPAERADLKQLMVHAFIKRSE 306 (333)
T ss_pred chhhhhcccccccccHHHHHHHHhcCCCccCCCCCcCHHHHHHHHHhccCCcccCcCHHHHhhCHHHhcCc
Confidence 000000 0113578899999999999999999999999999998654
|
Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst |
| >PTZ00266 NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-45 Score=384.73 Aligned_cols=267 Identities=25% Similarity=0.435 Sum_probs=220.5
Q ss_pred ccccccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEE
Q 042823 15 GKAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYE 94 (477)
Q Consensus 15 ~~~~~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~ 94 (477)
-...+....+|.+++.||+|+||+||+|.++.++..||+|++..... .......+..|+.++..| .|||||+++++|.
T Consensus 5 ~~~ge~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l-~e~~~~~~~~EI~IL~~L-~HPNIVrl~d~f~ 82 (1021)
T PTZ00266 5 YDDGESRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGL-KEREKSQLVIEVNVMREL-KHKNIVRYIDRFL 82 (1021)
T ss_pred ccCCccccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEecccc-CHHHHHHHHHHHHHHHHc-CCCCcCeEEEEEE
Confidence 34567778899999999999999999999999999999999865432 334456788999999999 7999999999985
Q ss_pred e--CCeEEEEEeccCCCchHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHc-------CCeeccCCCCceeeeec-
Q 042823 95 D--ETAVHVVMELCEGGDLFDRIIA----KGYNSERDAATVLRAIVNAVNVCHSM-------GVMHRDLKPENFSFISR- 160 (477)
Q Consensus 95 ~--~~~~~lv~e~~~gg~L~~~l~~----~~~~~~~~~~~i~~qil~~L~~lH~~-------~ivH~dlkp~Nil~~~~- 160 (477)
. ...+|||||||++|+|.++|.. .+.+++..++.|+.||+.||.|||+. +||||||||+|||+...
T Consensus 83 de~~~~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~ 162 (1021)
T PTZ00266 83 NKANQKLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGI 162 (1021)
T ss_pred ecCCCEEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCc
Confidence 4 4579999999999999999875 35789999999999999999999985 49999999999998431
Q ss_pred -------------CCCCCEEEeecCCccccCCCcceecccccccccchhhhhh---hcCCccchHhHHHHHHHHhhCCCC
Q 042823 161 -------------DDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLRR---RYGKEIDIWSAGVILYILLSGVPP 224 (477)
Q Consensus 161 -------------~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~DiwslG~il~~l~tg~~p 224 (477)
+....+||+|||++............+||+.|+|||++.+ .++.++||||||||+|+|+||.+|
T Consensus 163 ~~lg~i~~~~~n~ng~~iVKLsDFGlAr~l~~~s~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~P 242 (1021)
T PTZ00266 163 RHIGKITAQANNLNGRPIAKIGDFGLSKNIGIESMAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTP 242 (1021)
T ss_pred cccccccccccccCCCCceEEccCCccccccccccccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCC
Confidence 2345699999999987654444455689999999999853 478999999999999999999999
Q ss_pred CCCCChhhHHHHHHcCCccCCCCCCCCCCHHHHHHHHHhcccCccccCCHHHHhcCcccCcC
Q 042823 225 FWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRES 286 (477)
Q Consensus 225 f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~ 286 (477)
|........+......... .+.+..+.++.+||..||..+|.+||++.++|.|||++..
T Consensus 243 F~~~~~~~qli~~lk~~p~---lpi~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~h~~ik~i 301 (1021)
T PTZ00266 243 FHKANNFSQLISELKRGPD---LPIKGKSKELNILIKNLLNLSAKERPSALQCLGYQIIKNV 301 (1021)
T ss_pred CCcCCcHHHHHHHHhcCCC---CCcCCCCHHHHHHHHHHhcCChhHCcCHHHHhccHHHhhc
Confidence 9766554443333332222 2234578999999999999999999999999999999754
|
|
| >cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-45 Score=362.24 Aligned_cols=264 Identities=24% Similarity=0.400 Sum_probs=212.5
Q ss_pred ccccccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEE
Q 042823 15 GKAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYE 94 (477)
Q Consensus 15 ~~~~~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~ 94 (477)
+.....+.++|++.+.||+|+||.||+|.+..+++.||+|++..... .......+.+|+.+++.+ +||||+++++++.
T Consensus 9 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~ 86 (355)
T cd07874 9 GDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQ-NQTHAKRAYRELVLMKCV-NHKNIISLLNVFT 86 (355)
T ss_pred CchhhhhhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCccc-ChHHHHHHHHHHHHHHHh-CCCchhceeeeee
Confidence 34455678899999999999999999999999999999999865322 223445677899999888 7999999999986
Q ss_pred eC------CeEEEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEE
Q 042823 95 DE------TAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKV 168 (477)
Q Consensus 95 ~~------~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl 168 (477)
.. ..+|+||||+++ +|.+.+.. .+++..+..++.|++.||.|||++||+||||||+||++ +.++.+||
T Consensus 87 ~~~~~~~~~~~~lv~e~~~~-~l~~~~~~--~l~~~~~~~~~~qi~~aL~~LH~~givHrDikp~Nill---~~~~~~kl 160 (355)
T cd07874 87 PQKSLEEFQDVYLVMELMDA-NLCQVIQM--ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV---KSDCTLKI 160 (355)
T ss_pred ccccccccceeEEEhhhhcc-cHHHHHhh--cCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEE---CCCCCEEE
Confidence 43 357999999976 67676643 47889999999999999999999999999999999999 67889999
Q ss_pred eecCCccccCCCcceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCC------
Q 042823 169 TDFGSALLFEEGQVYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGE------ 241 (477)
Q Consensus 169 ~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~------ 241 (477)
+|||++.............||+.|+|||++.+ .++.++|||||||++|+|++|..||.+......+..+....
T Consensus 161 ~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 240 (355)
T cd07874 161 LDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPE 240 (355)
T ss_pred eeCcccccCCCccccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHH
Confidence 99999987655444455689999999999875 58999999999999999999999998766444333221110
Q ss_pred ----------------ccC----------------CCCCCCCCCHHHHHHHHHhcccCccccCCHHHHhcCcccCcC
Q 042823 242 ----------------IDF----------------DTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRES 286 (477)
Q Consensus 242 ----------------~~~----------------~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~ 286 (477)
..+ ........+..+++||.+||+.||++|||+.++|+||||...
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~hp~~~~~ 317 (355)
T cd07874 241 FMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQHPYINVW 317 (355)
T ss_pred HHHhhcHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcCcchhcc
Confidence 000 000112246788999999999999999999999999999643
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok |
| >PTZ00267 NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-45 Score=370.82 Aligned_cols=254 Identities=28% Similarity=0.429 Sum_probs=218.1
Q ss_pred cccccccccccccCCeEEEEEEEccC-CceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEE
Q 042823 22 MLHYFFGRMLGRGQFGVSYLCTENST-NRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVH 100 (477)
Q Consensus 22 ~~~Y~~~~~iG~G~~g~V~~~~~~~~-~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~ 100 (477)
...|.+.+.||+|++|.||+|.+..+ +..||+|.+... .......+.+|+.++..+ +|||||++++++..++.+|
T Consensus 66 ~~~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~---~~~~~~~~~~E~~~l~~l-~Hpniv~~~~~~~~~~~~~ 141 (478)
T PTZ00267 66 EHMYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLN---DERQAAYARSELHCLAAC-DHFGIVKHFDDFKSDDKLL 141 (478)
T ss_pred ceeEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccC---CHHHHHHHHHHHHHHHhC-CCCCEeEEEEEEEECCEEE
Confidence 44599999999999999999998877 788999976433 223345677899999999 7999999999999999999
Q ss_pred EEEeccCCCchHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccc
Q 042823 101 VVMELCEGGDLFDRIIA----KGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALL 176 (477)
Q Consensus 101 lv~e~~~gg~L~~~l~~----~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~ 176 (477)
+||||++||+|.+++.. ...+++.++..++.||+.||.|||++||+||||||+|||+ +..+.+||+|||++..
T Consensus 142 lv~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll---~~~~~~kL~DFgla~~ 218 (478)
T PTZ00267 142 LIMEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRKMMHRDLKSANIFL---MPTGIIKLGDFGFSKQ 218 (478)
T ss_pred EEEECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEECCcCHHhEEE---CCCCcEEEEeCcCcee
Confidence 99999999999987754 3468999999999999999999999999999999999999 6788999999999987
Q ss_pred cCCCc---ceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCCC
Q 042823 177 FEEGQ---VYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSI 252 (477)
Q Consensus 177 ~~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 252 (477)
..... .....+||+.|+|||++.+ .++.++|||||||++|+|++|..||.+.........+..+.... ....+
T Consensus 219 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~~~~~~~~~~~~~~---~~~~~ 295 (478)
T PTZ00267 219 YSDSVSLDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQREIMQQVLYGKYDP---FPCPV 295 (478)
T ss_pred cCCccccccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCC---CCccC
Confidence 64332 1234579999999999865 58999999999999999999999998887777777777665432 12357
Q ss_pred CHHHHHHHHHhcccCccccCCHHHHhcCcccCc
Q 042823 253 SSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRE 285 (477)
Q Consensus 253 ~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~ 285 (477)
++.++++|.+||..||++||++.+++.|+|++.
T Consensus 296 s~~~~~li~~~L~~dP~~Rps~~~~l~~~~~~~ 328 (478)
T PTZ00267 296 SSGMKALLDPLLSKNPALRPTTQQLLHTEFLKY 328 (478)
T ss_pred CHHHHHHHHHHhccChhhCcCHHHHHhCHHHHH
Confidence 899999999999999999999999999999864
|
|
| >PTZ00283 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-45 Score=372.36 Aligned_cols=259 Identities=29% Similarity=0.479 Sum_probs=220.2
Q ss_pred ccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCC-
Q 042823 19 EDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDET- 97 (477)
Q Consensus 19 ~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~- 97 (477)
....++|++.+.||+|+||+||+|.+..+++.||+|++..... .......+.+|+..+..+ +||||+++++.+....
T Consensus 28 ~~~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~-~~~~~~~~~~Ei~~l~~~-~h~~iv~~~~~~~~~~~ 105 (496)
T PTZ00283 28 KEQAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGM-SEADKNRAQAEVCCLLNC-DFFSIVKCHEDFAKKDP 105 (496)
T ss_pred cccCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccC-CHHHHHHHHHHHHHHhcC-CCCcEEEeecceecccc
Confidence 3455799999999999999999999999999999999875432 334456678899998888 7999999998875332
Q ss_pred -------eEEEEEeccCCCchHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCE
Q 042823 98 -------AVHVVMELCEGGDLFDRIIAK----GYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALL 166 (477)
Q Consensus 98 -------~~~lv~e~~~gg~L~~~l~~~----~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~ 166 (477)
.+++||||+++|+|.+++... ..+++..+..++.|++.||.|||+.||+||||||+||++ +.++.+
T Consensus 106 ~~~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~IiHrDLKP~NILl---~~~~~v 182 (496)
T PTZ00283 106 RNPENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKHMIHRDIKSANILL---CSNGLV 182 (496)
T ss_pred cCcccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEE---eCCCCE
Confidence 478999999999999988653 468999999999999999999999999999999999999 677899
Q ss_pred EEeecCCccccCCC---cceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCc
Q 042823 167 KVTDFGSALLFEEG---QVYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEI 242 (477)
Q Consensus 167 kl~Dfg~a~~~~~~---~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~ 242 (477)
||+|||++...... ......+||+.|+|||++.+ .++.++|||||||++|+|++|..||.+.+.......+..+..
T Consensus 183 kL~DFGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~~~~~~~~~~~~~ 262 (496)
T PTZ00283 183 KLGDFGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGENMEEVMHKTLAGRY 262 (496)
T ss_pred EEEecccCeeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCC
Confidence 99999998765332 12234679999999999975 589999999999999999999999988887777777766544
Q ss_pred cCCCCCCCCCCHHHHHHHHHhcccCccccCCHHHHhcCcccCc
Q 042823 243 DFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRE 285 (477)
Q Consensus 243 ~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~ 285 (477)
.. ..+.+++++.+++.+||+.||.+||++.++++|||++.
T Consensus 263 ~~---~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~p~~~~ 302 (496)
T PTZ00283 263 DP---LPPSISPEMQEIVTALLSSDPKRRPSSSKLLNMPICKL 302 (496)
T ss_pred CC---CCCCCCHHHHHHHHHHcccChhhCcCHHHHHhCHHHHH
Confidence 32 22468999999999999999999999999999999864
|
|
| >cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-45 Score=362.82 Aligned_cols=258 Identities=29% Similarity=0.418 Sum_probs=213.7
Q ss_pred cccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCC-----e
Q 042823 24 HYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDET-----A 98 (477)
Q Consensus 24 ~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~-----~ 98 (477)
+|++++.||+|+||.||+|.+..+++.||+|++.... ........+.+|+.+++.+ +||||+++++++.... .
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~ 78 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVF-QNLVSCKRVFRELKMLCFF-KHDNVLSALDILQPPHIDPFEE 78 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccc-cchHHHHHHHHHHHHHHhC-CCCCcCCHhheecCCCccccce
Confidence 4788999999999999999999999999999886432 2223456788999999999 7999999999998776 7
Q ss_pred EEEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccC
Q 042823 99 VHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFE 178 (477)
Q Consensus 99 ~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~ 178 (477)
+|+||||+. ++|.+.+...+.+++..+..++.||+.||.|||++|++||||||+||++ +.++.+||+|||++....
T Consensus 79 ~~lv~e~~~-~~l~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nili---~~~~~~kL~Dfg~a~~~~ 154 (372)
T cd07853 79 IYVVTELMQ-SDLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLV---NSNCVLKICDFGLARVEE 154 (372)
T ss_pred EEEEeeccc-cCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHHEEE---CCCCCEEeccccceeecc
Confidence 999999996 5898988888889999999999999999999999999999999999999 778899999999987653
Q ss_pred CCc--ceecccccccccchhhhhh--hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcC--------------
Q 042823 179 EGQ--VYRDIVGSGFYIAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQG-------------- 240 (477)
Q Consensus 179 ~~~--~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~-------------- 240 (477)
... ......+|+.|+|||++.+ .++.++||||+||++|+|++|++||.+.+....+..+...
T Consensus 155 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~ 234 (372)
T cd07853 155 PDESKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRSACE 234 (372)
T ss_pred cCccccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhH
Confidence 322 2234568999999999875 4789999999999999999999999887665554443221
Q ss_pred ---------CccCCC-----CCCCCCCHHHHHHHHHhcccCccccCCHHHHhcCcccCcCC
Q 042823 241 ---------EIDFDT-----DPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESG 287 (477)
Q Consensus 241 ---------~~~~~~-----~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~~ 287 (477)
....+. ...+..++++.+||.+||+.||.+|||+.++|+||||....
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~~~ 295 (372)
T cd07853 235 GARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAHPYLDEGR 295 (372)
T ss_pred HHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcCHhhCCCc
Confidence 000000 11234688999999999999999999999999999998753
|
Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription |
| >KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-46 Score=384.27 Aligned_cols=260 Identities=33% Similarity=0.531 Sum_probs=228.3
Q ss_pred ccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEE
Q 042823 21 VMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVH 100 (477)
Q Consensus 21 ~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~ 100 (477)
-.++|.|+++||+|+||.|.+++++.|++.||+|++.+-......+...+..|-.++.-- +.+=|+.++.+|+++.++|
T Consensus 73 ~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~-ns~Wiv~LhyAFQD~~~LY 151 (1317)
T KOG0612|consen 73 KAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFG-NSEWIVQLHYAFQDERYLY 151 (1317)
T ss_pred CHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcC-CcHHHHHHHHHhcCccceE
Confidence 356899999999999999999999999999999999764333334455677777776655 7889999999999999999
Q ss_pred EEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCCC
Q 042823 101 VVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEG 180 (477)
Q Consensus 101 lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~ 180 (477)
+||||++||+|..++.+..++++..++.++..|+.||.-||+.|+|||||||+|||+ +..|+|||+|||.+......
T Consensus 152 lVMdY~pGGDlltLlSk~~~~pE~~ArFY~aEiVlAldslH~mgyVHRDiKPDNvLl---d~~GHikLADFGsClkm~~d 228 (1317)
T KOG0612|consen 152 LVMDYMPGGDLLTLLSKFDRLPEDWARFYTAEIVLALDSLHSMGYVHRDIKPDNVLL---DKSGHIKLADFGSCLKMDAD 228 (1317)
T ss_pred EEEecccCchHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHhccceeccCCcceeEe---cccCcEeeccchhHHhcCCC
Confidence 999999999999999998899999999999999999999999999999999999999 89999999999987766533
Q ss_pred -cc-eecccccccccchhhhh------hhcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcC--CccCCCCCCC
Q 042823 181 -QV-YRDIVGSGFYIAPEVLR------RRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQG--EIDFDTDPWP 250 (477)
Q Consensus 181 -~~-~~~~~gt~~y~aPE~~~------~~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~--~~~~~~~~~~ 250 (477)
.. ....+|||-|.|||++. +.|++.+|.||+||++|||+.|..||+..+.-+.+.+|+.- .+.|| .-.
T Consensus 229 G~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYadslveTY~KIm~hk~~l~FP--~~~ 306 (1317)
T KOG0612|consen 229 GTVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADSLVETYGKIMNHKESLSFP--DET 306 (1317)
T ss_pred CcEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHHHHHHHHHHhchhhhcCCC--ccc
Confidence 32 34579999999999984 45999999999999999999999999999999999999887 45555 334
Q ss_pred CCCHHHHHHHHHhcccCccccCC---HHHHhcCcccCcCC
Q 042823 251 SISSTAKDLVRRMLTKDPKRRIT---AAQVLEHPWLRESG 287 (477)
Q Consensus 251 ~~~~~~~~li~~~l~~dp~~R~s---~~~~l~h~~~~~~~ 287 (477)
.+|+++++||.+++. +|+.|.. ++++.+||||....
T Consensus 307 ~VSeeakdLI~~ll~-~~e~RLgrngiedik~HpFF~g~~ 345 (1317)
T KOG0612|consen 307 DVSEEAKDLIEALLC-DREVRLGRNGIEDIKNHPFFEGID 345 (1317)
T ss_pred ccCHHHHHHHHHHhc-ChhhhcccccHHHHHhCccccCCC
Confidence 699999999999986 5999998 99999999998653
|
|
| >cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-44 Score=346.27 Aligned_cols=254 Identities=31% Similarity=0.588 Sum_probs=222.7
Q ss_pred ccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 042823 23 LHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVV 102 (477)
Q Consensus 23 ~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~lv 102 (477)
++|++.+.||+|+||.||+|.+..+++.||+|++.+...........+.+|++++.++ +||||+++++++.+...+|+|
T Consensus 1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~~v 79 (290)
T cd05580 1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSI-RHPFLVNLYGSFQDDSNLYLV 79 (290)
T ss_pred CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhC-CCCCccceeeEEEcCCeEEEE
Confidence 4799999999999999999999999999999998754433334456788999999999 699999999999999999999
Q ss_pred EeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCCCcc
Q 042823 103 MELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQV 182 (477)
Q Consensus 103 ~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~ 182 (477)
|||++|++|.+++...+.+++..+..++.|++.||.|||++|++||||+|.||++ +.++.+||+|||++......
T Consensus 80 ~e~~~~~~L~~~~~~~~~l~~~~~~~~~~qil~~l~~lH~~~i~H~dl~p~nili---~~~~~~kl~dfg~~~~~~~~-- 154 (290)
T cd05580 80 MEYVPGGELFSHLRKSGRFPEPVARFYAAQVVLALEYLHSLDIVYRDLKPENLLL---DSDGYIKITDFGFAKRVKGR-- 154 (290)
T ss_pred EecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEE---CCCCCEEEeeCCCccccCCC--
Confidence 9999999999999998899999999999999999999999999999999999999 67788999999998776443
Q ss_pred eecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCCCCHHHHHHHH
Q 042823 183 YRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVR 261 (477)
Q Consensus 183 ~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~ 261 (477)
.....|++.|+|||.+.+ .++.++||||||+++|+|++|..||...........+..+...++ +.+++.++++|.
T Consensus 155 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~li~ 230 (290)
T cd05580 155 TYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNPIQIYEKILEGKVRFP----SFFSPDAKDLIR 230 (290)
T ss_pred CCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCccCC----ccCCHHHHHHHH
Confidence 234578999999998864 578899999999999999999999988776666666666554433 356899999999
Q ss_pred HhcccCccccC-----CHHHHhcCcccCcC
Q 042823 262 RMLTKDPKRRI-----TAAQVLEHPWLRES 286 (477)
Q Consensus 262 ~~l~~dp~~R~-----s~~~~l~h~~~~~~ 286 (477)
+||..||.+|+ ++.++++||||...
T Consensus 231 ~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~ 260 (290)
T cd05580 231 NLLQVDLTKRLGNLKNGVNDIKNHPWFAGI 260 (290)
T ss_pred HHccCCHHHccCcccCCHHHHHcCcccccC
Confidence 99999999999 99999999999654
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi |
| >cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-44 Score=341.99 Aligned_cols=270 Identities=27% Similarity=0.420 Sum_probs=224.2
Q ss_pred ccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 042823 23 LHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVV 102 (477)
Q Consensus 23 ~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~lv 102 (477)
++|++.+.||.|++|.||+|.+..+++.||+|++..... ......+.+|+++++.+ +||||+++++++.++..+|+|
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~--~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~~v 77 (274)
T cd06609 1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEA--EDEIEDIQQEIQFLSQC-RSPYITKYYGSFLKGSKLWII 77 (274)
T ss_pred ChhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeecccc--chHHHHHHHHHHHHHHc-CCCCeeeeeEEEEECCeEEEE
Confidence 479999999999999999999999999999999865432 23345678899999999 699999999999999999999
Q ss_pred EeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCCC-c
Q 042823 103 MELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEG-Q 181 (477)
Q Consensus 103 ~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~-~ 181 (477)
+||+++++|.+++... ++++..+..++.|++.||.|||+.+++||||+|+||++ +.++.++|+|||++...... .
T Consensus 78 ~e~~~~~~L~~~~~~~-~~~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i---~~~~~~~l~d~g~~~~~~~~~~ 153 (274)
T cd06609 78 MEYCGGGSCLDLLKPG-KLDETYIAFILREVLLGLEYLHEEGKIHRDIKAANILL---SEEGDVKLADFGVSGQLTSTMS 153 (274)
T ss_pred EEeeCCCcHHHHHhhc-CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEE---CCCCCEEEcccccceeeccccc
Confidence 9999999999998765 78999999999999999999999999999999999999 77889999999998776543 2
Q ss_pred ceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCCCCHHHHHHH
Q 042823 182 VYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLV 260 (477)
Q Consensus 182 ~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li 260 (477)
......|++.|+|||.+.+ .++.++|||||||++|+|+||.+||...........+.....+.. ....+++.+.+++
T Consensus 154 ~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l 231 (274)
T cd06609 154 KRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPMRVLFLIPKNNPPSL--EGNKFSKPFKDFV 231 (274)
T ss_pred ccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchHHHHHHhhhcCCCCC--cccccCHHHHHHH
Confidence 2344578899999999864 589999999999999999999999977665555544444422211 1122789999999
Q ss_pred HHhcccCccccCCHHHHhcCcccCcCCCCCCchHHHHHHHH
Q 042823 261 RRMLTKDPKRRITAAQVLEHPWLRESGEASDDTSVILRMKQ 301 (477)
Q Consensus 261 ~~~l~~dp~~R~s~~~~l~h~~~~~~~~~~~~~~~~~~~~~ 301 (477)
.+||..+|++|||+.++++||||.......-.......+++
T Consensus 232 ~~~l~~~p~~Rpt~~~il~~~~~~~~~~~~~~~~~~~~~~~ 272 (274)
T cd06609 232 SLCLNKDPKERPSAKELLKHKFIKKAKKTSYLTLLIERIKK 272 (274)
T ss_pred HHHhhCChhhCcCHHHHhhChhhcCCCcccHHHHHHHHHHh
Confidence 99999999999999999999999886655333344444433
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) |
| >cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-45 Score=359.42 Aligned_cols=263 Identities=24% Similarity=0.402 Sum_probs=213.2
Q ss_pred cccccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEe
Q 042823 16 KAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYED 95 (477)
Q Consensus 16 ~~~~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~ 95 (477)
+....+.++|++.+.||+|+||+||+|.+..+++.||+|++..... .......+.+|+.+++.+ +||||+++++++..
T Consensus 8 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~ 85 (343)
T cd07878 8 KTVWEVPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQ-SLIHARRTYRELRLLKHM-KHENVIGLLDVFTP 85 (343)
T ss_pred HHHhhhhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhh-hhHHHHHHHHHHHHHHhc-CCCchhhhhhhhcc
Confidence 4455778999999999999999999999999999999999865322 222345677899999999 79999999998854
Q ss_pred C------CeEEEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEe
Q 042823 96 E------TAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVT 169 (477)
Q Consensus 96 ~------~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~ 169 (477)
. ..+|++++++ |++|.+++. .+.+++..+..++.||+.||.|||++||+||||||+||++ +.++.+||+
T Consensus 86 ~~~~~~~~~~~~~~~~~-~~~l~~~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrdikp~Nil~---~~~~~~kl~ 160 (343)
T cd07878 86 ATSIENFNEVYLVTNLM-GADLNNIVK-CQKLSDEHVQFLIYQLLRGLKYIHSAGIIHRDLKPSNVAV---NEDCELRIL 160 (343)
T ss_pred cccccccCcEEEEeecC-CCCHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeecccCChhhEEE---CCCCCEEEc
Confidence 3 4579999998 678877664 4568999999999999999999999999999999999999 678889999
Q ss_pred ecCCccccCCCcceecccccccccchhhhhh--hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCc-----
Q 042823 170 DFGSALLFEEGQVYRDIVGSGFYIAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEI----- 242 (477)
Q Consensus 170 Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~----- 242 (477)
|||++...... .....||+.|+|||++.+ .++.++|||||||++|+|++|.+||.+......+..+.....
T Consensus 161 Dfg~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 238 (343)
T cd07878 161 DFGLARQADDE--MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIMEVVGTPSPE 238 (343)
T ss_pred CCccceecCCC--cCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCCHH
Confidence 99999865432 245678999999999865 588999999999999999999999987655444333322100
Q ss_pred ------------------cCCC----CCCCCCCHHHHHHHHHhcccCccccCCHHHHhcCcccCcCC
Q 042823 243 ------------------DFDT----DPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESG 287 (477)
Q Consensus 243 ------------------~~~~----~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~~ 287 (477)
..+. ..+...++.+.+||.+||+.||.+|||+.++|+||||....
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~hp~~~~~~ 305 (343)
T cd07878 239 VLKKISSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAHPYFSQYH 305 (343)
T ss_pred HHHhcchhhHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCcchhccC
Confidence 0000 01124567889999999999999999999999999998654
|
Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is |
| >cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-44 Score=341.36 Aligned_cols=255 Identities=27% Similarity=0.417 Sum_probs=213.5
Q ss_pred ccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEE
Q 042823 21 VMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVH 100 (477)
Q Consensus 21 ~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~ 100 (477)
..++|.+.+.||+|+||.||+|.+..+++.||+|++..... .....+.+|+.++..+ +||||+++++++...+.+|
T Consensus 7 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~---~~~~~~~~e~~~~~~l-~h~~ii~~~~~~~~~~~~~ 82 (267)
T cd06645 7 PQEDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPG---EDFAVVQQEIIMMKDC-KHSNIVAYFGSYLRRDKLW 82 (267)
T ss_pred cHHHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCch---hHHHHHHHHHHHHHhC-CCCCeeeEEEEEEeCCEEE
Confidence 45689999999999999999999999999999999865432 2334577899998888 7999999999999999999
Q ss_pred EEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCCC
Q 042823 101 VVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEG 180 (477)
Q Consensus 101 lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~ 180 (477)
+||||+++++|.+++...+.+++.++..++.|++.||.|||++|++|+||||+||++ +..+.+||+|||++......
T Consensus 83 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili---~~~~~~~l~dfg~~~~~~~~ 159 (267)
T cd06645 83 ICMEFCGGGSLQDIYHVTGPLSESQIAYVSRETLQGLYYLHSKGKMHRDIKGANILL---TDNGHVKLADFGVSAQITAT 159 (267)
T ss_pred EEEeccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE---CCCCCEEECcceeeeEccCc
Confidence 999999999999999888899999999999999999999999999999999999999 67788999999998755332
Q ss_pred c-ceecccccccccchhhhh----hhcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCC-CCCCCCCH
Q 042823 181 Q-VYRDIVGSGFYIAPEVLR----RRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDT-DPWPSISS 254 (477)
Q Consensus 181 ~-~~~~~~gt~~y~aPE~~~----~~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~-~~~~~~~~ 254 (477)
. ......|++.|+|||++. +.++.++|+||+||++|+|++|.+||...................+. .....++.
T Consensus 160 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (267)
T cd06645 160 IAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMTKSNFQPPKLKDKMKWSN 239 (267)
T ss_pred ccccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhhHHhhhccCCCCCcccccCCCCH
Confidence 2 223457899999999973 35888999999999999999999999765544433333332222111 11124788
Q ss_pred HHHHHHHHhcccCccccCCHHHHhcCcc
Q 042823 255 TAKDLVRRMLTKDPKRRITAAQVLEHPW 282 (477)
Q Consensus 255 ~~~~li~~~l~~dp~~R~s~~~~l~h~~ 282 (477)
.+.++|.+||+.+|++|||+.++++|||
T Consensus 240 ~~~~li~~~l~~~P~~R~~~~~ll~~~~ 267 (267)
T cd06645 240 SFHHFVKMALTKNPKKRPTAEKLLQHPF 267 (267)
T ss_pred HHHHHHHHHccCCchhCcCHHHHhcCCC
Confidence 9999999999999999999999999998
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated |
| >cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-44 Score=339.66 Aligned_cols=255 Identities=26% Similarity=0.460 Sum_probs=215.6
Q ss_pred ccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccc--hhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEE
Q 042823 23 LHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMR--LAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVH 100 (477)
Q Consensus 23 ~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~--~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~ 100 (477)
+.|.+.+.||+|++|.||.|.+..+++.||+|.+....... ......+.+|+.+++++ +||||++++++++.+...|
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~ 80 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNL-QHERIVQYYGCLRDDETLS 80 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhC-CCCCeeeeEEEEccCCeEE
Confidence 46899999999999999999999999999999986543211 22345688899999999 7999999999999999999
Q ss_pred EEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCCC
Q 042823 101 VVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEG 180 (477)
Q Consensus 101 lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~ 180 (477)
+|+||++|++|.+.+...+.+++..+..++.|++.||.|||+.|++||||+|+||++ +.++.++|+|||++......
T Consensus 81 ~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nilv---~~~~~~~l~dfg~~~~~~~~ 157 (263)
T cd06625 81 IFMEYMPGGSVKDQLKAYGALTETVTRKYTRQILEGVEYLHSNMIVHRDIKGANILR---DSAGNVKLGDFGASKRLQTI 157 (263)
T ss_pred EEEEECCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE---cCCCCEEEeecccceecccc
Confidence 999999999999999988889999999999999999999999999999999999998 67788999999998765332
Q ss_pred cce----ecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCCCCHH
Q 042823 181 QVY----RDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISST 255 (477)
Q Consensus 181 ~~~----~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 255 (477)
... ....|++.|+|||++.+ .++.++||||+|+++|+|++|+.||...........+....... .....++..
T Consensus 158 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 235 (263)
T cd06625 158 CSSGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAMAAIFKIATQPTNP--QLPSHVSPD 235 (263)
T ss_pred ccccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccchHHHHHHHhccCCCC--CCCccCCHH
Confidence 111 23467889999999865 48899999999999999999999997765555444444332221 122467899
Q ss_pred HHHHHHHhcccCccccCCHHHHhcCccc
Q 042823 256 AKDLVRRMLTKDPKRRITAAQVLEHPWL 283 (477)
Q Consensus 256 ~~~li~~~l~~dp~~R~s~~~~l~h~~~ 283 (477)
+.++|.+||..+|.+|||+.++++||||
T Consensus 236 ~~~li~~~l~~~p~~Rpt~~~ll~~~~~ 263 (263)
T cd06625 236 ARNFLRRTFVENAKKRPSAEELLRHFFV 263 (263)
T ss_pred HHHHHHHHhhcCcccCCCHHHHhhCCCC
Confidence 9999999999999999999999999997
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t |
| >cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-44 Score=348.17 Aligned_cols=259 Identities=25% Similarity=0.412 Sum_probs=212.6
Q ss_pred cccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEE
Q 042823 22 MLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHV 101 (477)
Q Consensus 22 ~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~l 101 (477)
.++|.+.+.||+|+||.||+|.++.+++.||+|.+...... .....+.+|+.++..+ +||||+++++++..+..+|+
T Consensus 5 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~E~~~l~~l-~h~nI~~~~~~~~~~~~~~l 81 (301)
T cd07873 5 LETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEE--GAPCTAIREVSLLKDL-KHANIVTLHDIIHTEKSLTL 81 (301)
T ss_pred ccceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEeccccc--CchhHHHHHHHHHHhc-CCCCcceEEEEEecCCeEEE
Confidence 35799999999999999999999999999999998654322 2234567899999999 79999999999999999999
Q ss_pred EEeccCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCCC
Q 042823 102 VMELCEGGDLFDRIIAK-GYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEG 180 (477)
Q Consensus 102 v~e~~~gg~L~~~l~~~-~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~ 180 (477)
||||+++ +|.+++... ..+++..+..++.||+.||.|||++|++||||||+||++ +.++.+||+|||++......
T Consensus 82 v~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~i~H~dlkp~Nil~---~~~~~~kl~dfg~~~~~~~~ 157 (301)
T cd07873 82 VFEYLDK-DLKQYLDDCGNSINMHNVKLFLFQLLRGLNYCHRRKVLHRDLKPQNLLI---NERGELKLADFGLARAKSIP 157 (301)
T ss_pred EEecccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHHHEEE---CCCCcEEECcCcchhccCCC
Confidence 9999974 898888764 468999999999999999999999999999999999999 67788999999998754322
Q ss_pred -cceecccccccccchhhhhh--hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCc---------------
Q 042823 181 -QVYRDIVGSGFYIAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEI--------------- 242 (477)
Q Consensus 181 -~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~--------------- 242 (477)
.......+++.|+|||++.+ .++.++|||||||++|+|+||.+||...+..+....+.....
T Consensus 158 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (301)
T cd07873 158 TKTYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEE 237 (301)
T ss_pred CCcccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChhhchhhhcccc
Confidence 22234467899999999864 478899999999999999999999987765544433322110
Q ss_pred ----cCCC-------CCCCCCCHHHHHHHHHhcccCccccCCHHHHhcCcccCcCC
Q 042823 243 ----DFDT-------DPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESG 287 (477)
Q Consensus 243 ----~~~~-------~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~~ 287 (477)
..+. ...+.+++.+++||.+||+.||.+|||++++++||||...+
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~h~~f~~~~ 293 (301)
T cd07873 238 FKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMKHPYFHCLG 293 (301)
T ss_pred ccccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhcCccccccc
Confidence 0000 01235788999999999999999999999999999997654
|
Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl |
| >PTZ00284 protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-45 Score=370.95 Aligned_cols=259 Identities=23% Similarity=0.326 Sum_probs=202.5
Q ss_pred ccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhcc-----CCCCeeEEEEEEEe
Q 042823 21 VMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLS-----GQPNVVEFKSTYED 95 (477)
Q Consensus 21 ~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~-----~hpniv~~~~~~~~ 95 (477)
..++|++.+.||+|+||+||+|.+..+++.||||++..... .......|+.++..+. +|+++++++++|..
T Consensus 127 ~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~~----~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~ 202 (467)
T PTZ00284 127 STQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVPK----YTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQN 202 (467)
T ss_pred CCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecchh----hHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEc
Confidence 35789999999999999999999999999999999864321 2233455666665552 35679999999876
Q ss_pred C-CeEEEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH-cCCeeccCCCCceeeeecCC-----------
Q 042823 96 E-TAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHS-MGVMHRDLKPENFSFISRDD----------- 162 (477)
Q Consensus 96 ~-~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~-~~ivH~dlkp~Nil~~~~~~----------- 162 (477)
+ .++|+|||++ |++|.+++.+.+.+++..+..++.||+.||.|||+ .|||||||||+|||+...+.
T Consensus 203 ~~~~~~iv~~~~-g~~l~~~l~~~~~l~~~~~~~i~~qi~~aL~yLH~~~gIiHrDlKP~NILl~~~~~~~~~~~~~~~~ 281 (467)
T PTZ00284 203 ETGHMCIVMPKY-GPCLLDWIMKHGPFSHRHLAQIIFQTGVALDYFHTELHLMHTDLKPENILMETSDTVVDPVTNRALP 281 (467)
T ss_pred CCceEEEEEecc-CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEecCCcccccccccccC
Confidence 4 5789999998 67999999988889999999999999999999998 59999999999999943221
Q ss_pred --CCCEEEeecCCccccCCCcceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHc
Q 042823 163 --NALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQ 239 (477)
Q Consensus 163 --~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~ 239 (477)
...+||+|||.+..... .....+||+.|+|||++.+ .|+.++|||||||++|+|++|++||.+....+.+..+..
T Consensus 282 ~~~~~vkl~DfG~~~~~~~--~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~ 359 (467)
T PTZ00284 282 PDPCRVRICDLGGCCDERH--SRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTHDNLEHLHLMEK 359 (467)
T ss_pred CCCceEEECCCCccccCcc--ccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHH
Confidence 23599999998764322 2345689999999999875 589999999999999999999999987665544333322
Q ss_pred CCccCCC-----------------------C-------------CCC--CCCHHHHHHHHHhcccCccccCCHHHHhcCc
Q 042823 240 GEIDFDT-----------------------D-------------PWP--SISSTAKDLVRRMLTKDPKRRITAAQVLEHP 281 (477)
Q Consensus 240 ~~~~~~~-----------------------~-------------~~~--~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~ 281 (477)
....++. . .+. ..++.+.+||.+||++||.+|||+.|+|+||
T Consensus 360 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~ta~e~L~Hp 439 (467)
T PTZ00284 360 TLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQKRLNARQMTTHP 439 (467)
T ss_pred HcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhhCCCHHHHhcCc
Confidence 1100000 0 000 1245678999999999999999999999999
Q ss_pred ccCcC
Q 042823 282 WLRES 286 (477)
Q Consensus 282 ~~~~~ 286 (477)
||...
T Consensus 440 ~~~~~ 444 (467)
T PTZ00284 440 YVLKY 444 (467)
T ss_pred ccccc
Confidence 99864
|
|
| >cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-44 Score=337.27 Aligned_cols=252 Identities=31% Similarity=0.487 Sum_probs=213.5
Q ss_pred ccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEeccCC
Q 042823 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVVMELCEG 108 (477)
Q Consensus 29 ~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~lv~e~~~g 108 (477)
+.||+|+||.||+|.+..+++.||+|++.+...........+..|..++....+||||+++++++..++.+|+|+||++|
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 81 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG 81 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence 57999999999999999999999999986543222222334455555555555899999999999999999999999999
Q ss_pred CchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCCCcceecccc
Q 042823 109 GDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVG 188 (477)
Q Consensus 109 g~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~g 188 (477)
++|.+++...+.+++..+..++.|++.||.|||+.|++||||+|+||++ +..+.+||+|||++..... .....|
T Consensus 82 ~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~i~H~dl~p~nil~---~~~~~~~l~dfg~~~~~~~---~~~~~~ 155 (260)
T cd05611 82 GDCASLIKTLGGLPEDWAKQYIAEVVLGVEDLHQRGIIHRDIKPENLLI---DQTGHLKLTDFGLSRNGLE---NKKFVG 155 (260)
T ss_pred CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEE---CCCCcEEEeecccceeccc---cccCCC
Confidence 9999999888889999999999999999999999999999999999999 6778899999998875433 233468
Q ss_pred cccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCCCCHHHHHHHHHhcccC
Q 042823 189 SGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKD 267 (477)
Q Consensus 189 t~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~d 267 (477)
++.|+|||.+.+ .++.++||||+|+++|+|++|.+||...+.......+..+...++....+.+++.+.++|.+||+.+
T Consensus 156 ~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~ 235 (260)
T cd05611 156 TPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDAVFDNILSRRINWPEEVKEFCSPEAVDLINRLLCMD 235 (260)
T ss_pred CcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccCCCCcccccCCHHHHHHHHHHccCC
Confidence 899999999865 4789999999999999999999999888777777777666655555544578999999999999999
Q ss_pred ccccCC---HHHHhcCcccCcC
Q 042823 268 PKRRIT---AAQVLEHPWLRES 286 (477)
Q Consensus 268 p~~R~s---~~~~l~h~~~~~~ 286 (477)
|++||+ +.+++.||||+..
T Consensus 236 p~~R~~~~~~~~~l~~~~~~~~ 257 (260)
T cd05611 236 PAKRLGANGYQEIKSHPFFKSI 257 (260)
T ss_pred HHHccCCCcHHHHHcChHhhcC
Confidence 999994 5799999999764
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do |
| >cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-44 Score=352.41 Aligned_cols=253 Identities=22% Similarity=0.319 Sum_probs=202.6
Q ss_pred ccccccccccccccccCCeEEEEEEE-----ccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEE
Q 042823 19 EDVMLHYFFGRMLGRGQFGVSYLCTE-----NSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTY 93 (477)
Q Consensus 19 ~~~~~~Y~~~~~iG~G~~g~V~~~~~-----~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~ 93 (477)
....++|++.+.||+|+||.||+|.+ ..++..||+|++.... .......+.+|+.++..+.+||||+++++++
T Consensus 3 ~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~ 80 (338)
T cd05102 3 EFPRDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGA--TASEHKALMSELKILIHIGNHLNVVNLLGAC 80 (338)
T ss_pred ccchhHceeeeEeccCCcceEEEEEEeccCCcccchhhheecccccc--chHHHHHHHHHHHHHHHhccCcceeeEEeEe
Confidence 34457899999999999999999975 2445789999986432 2234567889999999997899999999988
Q ss_pred EeC-CeEEEEEeccCCCchHHHHHHc------------------------------------------------------
Q 042823 94 EDE-TAVHVVMELCEGGDLFDRIIAK------------------------------------------------------ 118 (477)
Q Consensus 94 ~~~-~~~~lv~e~~~gg~L~~~l~~~------------------------------------------------------ 118 (477)
... ..+|+|||||+||+|.+++...
T Consensus 81 ~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (338)
T cd05102 81 TKPNGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPP 160 (338)
T ss_pred cCCCCceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccc
Confidence 754 4689999999999999998753
Q ss_pred --------CCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCCCcc---eeccc
Q 042823 119 --------GYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQV---YRDIV 187 (477)
Q Consensus 119 --------~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~---~~~~~ 187 (477)
..++...+..++.||+.||.|||++||+||||||+||++ +.++.+||+|||++........ .....
T Consensus 161 ~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDiKp~Nil~---~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~ 237 (338)
T cd05102 161 QETDDLWKSPLTMEDLICYSFQVARGMEFLASRKCIHRDLAARNILL---SENNVVKICDFGLARDIYKDPDYVRKGSAR 237 (338)
T ss_pred hhccccccCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCccceEEE---cCCCcEEEeecccccccccCcchhcccCCC
Confidence 236777888999999999999999999999999999999 6778899999999976533221 12234
Q ss_pred ccccccchhhhhh-hcCCccchHhHHHHHHHHhh-CCCCCCCCChhhHH-HHHHcCCccCCCCCCCCCCHHHHHHHHHhc
Q 042823 188 GSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTY-DAILQGEIDFDTDPWPSISSTAKDLVRRML 264 (477)
Q Consensus 188 gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~t-g~~pf~~~~~~~~~-~~i~~~~~~~~~~~~~~~~~~~~~li~~~l 264 (477)
+++.|+|||++.+ .++.++|||||||++|+|++ |.+||.+....... ..+..+... . ....+++.+.+++.+||
T Consensus 238 ~~~~y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~l~~li~~cl 314 (338)
T cd05102 238 LPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEEFCQRLKDGTRM-R--APENATPEIYRIMLACW 314 (338)
T ss_pred CCccccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHhcCCCC-C--CCCCCCHHHHHHHHHHc
Confidence 5678999999864 58999999999999999997 99999875543333 333333221 1 12467899999999999
Q ss_pred ccCccccCCHHHHhc
Q 042823 265 TKDPKRRITAAQVLE 279 (477)
Q Consensus 265 ~~dp~~R~s~~~~l~ 279 (477)
+.||.+|||+.++++
T Consensus 315 ~~dp~~RPs~~el~~ 329 (338)
T cd05102 315 QGDPKERPTFSALVE 329 (338)
T ss_pred cCChhhCcCHHHHHH
Confidence 999999999999975
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V |
| >cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-44 Score=339.69 Aligned_cols=258 Identities=29% Similarity=0.390 Sum_probs=218.5
Q ss_pred ccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEE
Q 042823 21 VMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVH 100 (477)
Q Consensus 21 ~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~ 100 (477)
..++|++.+.||.|+||.||+|.+..++..+|+|.+... .......+.+|+.++..+ +||||+++++++..+..+|
T Consensus 3 ~~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~---~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~ 78 (280)
T cd06611 3 PNDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIE---SEEELEDFMVEIDILSEC-KHPNIVGLYEAYFYENKLW 78 (280)
T ss_pred chhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeC---CHHHHHHHHHHHHHHHhC-CCCceeEEEEEEecCCeEE
Confidence 356799999999999999999999889999999998643 233456678899999999 6999999999999999999
Q ss_pred EEEeccCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCC
Q 042823 101 VVMELCEGGDLFDRIIAK-GYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEE 179 (477)
Q Consensus 101 lv~e~~~gg~L~~~l~~~-~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~ 179 (477)
+||||++|++|.+++... ..+++.++..++.|++.||.|||+.||+||||||+||++ +.++.++|+|||.+.....
T Consensus 79 lv~e~~~~~~L~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~nili---~~~~~~~l~d~g~~~~~~~ 155 (280)
T cd06611 79 ILIEFCDGGALDSIMLELERGLTEPQIRYVCRQMLEALNFLHSHKVIHRDLKAGNILL---TLDGDVKLADFGVSAKNKS 155 (280)
T ss_pred EEeeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEE---CCCCCEEEccCccchhhcc
Confidence 999999999999988764 568999999999999999999999999999999999999 7788999999998765432
Q ss_pred C-cceecccccccccchhhhh------hhcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCCC
Q 042823 180 G-QVYRDIVGSGFYIAPEVLR------RRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSI 252 (477)
Q Consensus 180 ~-~~~~~~~gt~~y~aPE~~~------~~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 252 (477)
. .......|++.|+|||++. ..++.++|+|||||++|+|++|.+||...........+..+..+... ..+.+
T Consensus 156 ~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 234 (280)
T cd06611 156 TLQKRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPMRVLLKILKSEPPTLD-QPSKW 234 (280)
T ss_pred cccccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHHHHHHHHhcCCCCCcC-CcccC
Confidence 2 2223457899999999974 23677999999999999999999999887666666666554332111 12357
Q ss_pred CHHHHHHHHHhcccCccccCCHHHHhcCcccCcC
Q 042823 253 SSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRES 286 (477)
Q Consensus 253 ~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~ 286 (477)
+.++.++|.+||+.+|.+||++.++++|||+...
T Consensus 235 ~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~~ 268 (280)
T cd06611 235 SSSFNDFLKSCLVKDPDDRPTAAELLKHPFVSDQ 268 (280)
T ss_pred CHHHHHHHHHHhccChhhCcCHHHHhcChhhccc
Confidence 8999999999999999999999999999999865
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti |
| >cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-44 Score=349.80 Aligned_cols=249 Identities=29% Similarity=0.457 Sum_probs=193.3
Q ss_pred cccccccCCeEEEEEEEc--cCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEe--CCeEEEEE
Q 042823 28 GRMLGRGQFGVSYLCTEN--STNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYED--ETAVHVVM 103 (477)
Q Consensus 28 ~~~iG~G~~g~V~~~~~~--~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~--~~~~~lv~ 103 (477)
+++||+|+||+||+|+++ .+++.||+|.+..... ...+.+|+.++..+ +||||+++++++.. ...+|+||
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~~-----~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~lv~ 79 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGI-----SMSACREIALLREL-KHPNVISLQKVFLSHADRKVWLLF 79 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCCC-----cHHHHHHHHHHHhc-CCCCCcceeeeEecCCCcEEEEEE
Confidence 568999999999999975 4678999998864321 23467899999999 79999999999854 56789999
Q ss_pred eccCCCchHHHHHHc---------CCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeec-CCCCCEEEeecCC
Q 042823 104 ELCEGGDLFDRIIAK---------GYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISR-DDNALLKVTDFGS 173 (477)
Q Consensus 104 e~~~gg~L~~~l~~~---------~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~-~~~~~~kl~Dfg~ 173 (477)
||+.+ +|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||+... +..+.+||+|||+
T Consensus 80 e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~ 158 (317)
T cd07868 80 DYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGF 158 (317)
T ss_pred eccCC-CHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEecCCCCcCcEEEeecCc
Confidence 99965 888887532 247899999999999999999999999999999999998543 3457899999999
Q ss_pred ccccCCCc----ceecccccccccchhhhhh--hcCCccchHhHHHHHHHHhhCCCCCCCCChh---------hHHHHHH
Q 042823 174 ALLFEEGQ----VYRDIVGSGFYIAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPFWAETKK---------GTYDAIL 238 (477)
Q Consensus 174 a~~~~~~~----~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~l~tg~~pf~~~~~~---------~~~~~i~ 238 (477)
+....... ......||+.|+|||++.+ .++.++||||+||++|+|++|.+||...... ..+..+.
T Consensus 159 a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~ 238 (317)
T cd07868 159 ARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIF 238 (317)
T ss_pred eeccCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCCcccccccccccHHHHHHHH
Confidence 97654321 2234678999999999864 4889999999999999999999999654321 1111111
Q ss_pred cCCc--------------------------cCC--------CCCCCCCCHHHHHHHHHhcccCccccCCHHHHhcCccc
Q 042823 239 QGEI--------------------------DFD--------TDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWL 283 (477)
Q Consensus 239 ~~~~--------------------------~~~--------~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~ 283 (477)
.... ... .......+..+.+||.+||+.||.+|||++|+|+||||
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~t~~e~l~hp~f 317 (317)
T cd07868 239 NVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYF 317 (317)
T ss_pred HhcCCCChHHhHHHhhccchhhhhhhhhccccCcccccchHHhcCCCCChHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence 1000 000 00011235678999999999999999999999999997
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p |
| >cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-44 Score=337.80 Aligned_cols=255 Identities=24% Similarity=0.385 Sum_probs=212.2
Q ss_pred cccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeC---
Q 042823 20 DVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDE--- 96 (477)
Q Consensus 20 ~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~--- 96 (477)
+..+.|++.+.||+|+||.||+|.+..+++.||+|++.... .....+.+|+.++..+.+||||+++++++...
T Consensus 3 ~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~----~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~ 78 (272)
T cd06637 3 DPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG----DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPP 78 (272)
T ss_pred ChhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCC----ccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCC
Confidence 45678999999999999999999999999999999986543 23456788999999887899999999998653
Q ss_pred ---CeEEEEEeccCCCchHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeec
Q 042823 97 ---TAVHVVMELCEGGDLFDRIIAK--GYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDF 171 (477)
Q Consensus 97 ---~~~~lv~e~~~gg~L~~~l~~~--~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Df 171 (477)
..+|+||||+++|+|.+++... ..+++..+..++.|++.||.|||+++|+||||||+||++ +.++.+||+||
T Consensus 79 ~~~~~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivh~dl~~~nili---~~~~~~~l~Df 155 (272)
T cd06637 79 GMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLL---TENAEVKLVDF 155 (272)
T ss_pred CCCcEEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHEEE---CCCCCEEEccC
Confidence 4689999999999999998864 358999999999999999999999999999999999999 67788999999
Q ss_pred CCccccCCCc-ceecccccccccchhhhh------hhcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccC
Q 042823 172 GSALLFEEGQ-VYRDIVGSGFYIAPEVLR------RRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDF 244 (477)
Q Consensus 172 g~a~~~~~~~-~~~~~~gt~~y~aPE~~~------~~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~ 244 (477)
|++....... ......|++.|+|||++. ..++.++||||+||++|+|++|..||...........+.... .
T Consensus 156 g~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~~~~~~~~~--~ 233 (272)
T cd06637 156 GVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNP--A 233 (272)
T ss_pred CCceecccccccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhcCC--C
Confidence 9987654321 223457899999999984 247889999999999999999999997655444443333321 1
Q ss_pred CCCCCCCCCHHHHHHHHHhcccCccccCCHHHHhcCccc
Q 042823 245 DTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWL 283 (477)
Q Consensus 245 ~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~ 283 (477)
.......++..+.+|+.+||..+|.+|||+.+++.||||
T Consensus 234 ~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~~~~ 272 (272)
T cd06637 234 PRLKSKKWSKKFQSFIESCLVKNHSQRPTTEQLMKHPFI 272 (272)
T ss_pred CCCCCCCcCHHHHHHHHHHcCCChhhCCCHHHHhhCCCC
Confidence 222234678999999999999999999999999999997
|
Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ |
| >cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-43 Score=339.34 Aligned_cols=265 Identities=27% Similarity=0.442 Sum_probs=220.2
Q ss_pred ccccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeC
Q 042823 17 AYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDE 96 (477)
Q Consensus 17 ~~~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~ 96 (477)
.+.....+|++.+.||+|+||.||+|.+..+++.||+|.+..... .....+.+|+.+++.+ +||||+++++.+...
T Consensus 14 ~~~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~---~~~~~~~~e~~~l~~~-~h~~v~~~~~~~~~~ 89 (296)
T cd06654 14 SVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQ---PKKELIINEILVMREN-KNPNIVNYLDSYLVG 89 (296)
T ss_pred ccCCcccceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCc---chHHHHHHHHHHHHhC-CCCCEeeEEEEEEeC
Confidence 455667899999999999999999999999999999999875432 2345678899999888 799999999999999
Q ss_pred CeEEEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccc
Q 042823 97 TAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALL 176 (477)
Q Consensus 97 ~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~ 176 (477)
...|+||||++|++|.+++.. ..+++.++..++.|++.||.|||+.||+||||||+||++ +.++.+||+|||.+..
T Consensus 90 ~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~i~~ql~~aL~~LH~~gi~H~dLkp~Nill---~~~~~~kl~dfg~~~~ 165 (296)
T cd06654 90 DELWVVMEYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILL---GMDGSVKLTDFGFCAQ 165 (296)
T ss_pred CEEEEeecccCCCCHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEE---cCCCCEEECccccchh
Confidence 999999999999999998854 468999999999999999999999999999999999999 6778899999998876
Q ss_pred cCCCc-ceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCCCCH
Q 042823 177 FEEGQ-VYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISS 254 (477)
Q Consensus 177 ~~~~~-~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 254 (477)
..... ......|++.|+|||.+.+ .++.++||||+||++|+|++|.+||...........+...... .....+.++.
T Consensus 166 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 244 (296)
T cd06654 166 ITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTP-ELQNPEKLSA 244 (296)
T ss_pred ccccccccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHhHHHHhcCCCC-CCCCccccCH
Confidence 53322 1233578999999999865 4789999999999999999999999877654443333322211 1112245789
Q ss_pred HHHHHHHHhcccCccccCCHHHHhcCcccCcCCCCC
Q 042823 255 TAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEAS 290 (477)
Q Consensus 255 ~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~~~~~ 290 (477)
.+.+++.+||..+|++|||+.++++||||.......
T Consensus 245 ~l~~li~~~l~~~p~~Rpt~~eil~~~~~~~~~~~~ 280 (296)
T cd06654 245 IFRDFLNRCLDMDVEKRGSAKELLQHQFLKIAKPLS 280 (296)
T ss_pred HHHHHHHHHCcCCcccCcCHHHHhhChhhhccCCcc
Confidence 999999999999999999999999999998765433
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-44 Score=343.89 Aligned_cols=252 Identities=26% Similarity=0.407 Sum_probs=203.4
Q ss_pred cccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEE
Q 042823 24 HYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVVM 103 (477)
Q Consensus 24 ~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~lv~ 103 (477)
.|++.+.||+||.+.||++... ..+.||+|.+.... .......-+.+|+..+.+|.+|.+||++++|-..++++|+||
T Consensus 362 ~Yeilk~iG~GGSSkV~kV~~s-~~~iyalkkv~~~~-~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYmvm 439 (677)
T KOG0596|consen 362 EYEILKQIGSGGSSKVFKVLNS-DKQIYALKKVVLLE-ADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYMVM 439 (677)
T ss_pred hhhHHHhhcCCCcceeeeeecC-CCcchhhhHHHHhh-cCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEEEe
Confidence 4999999999999999999864 34567777665432 234667889999999999999999999999999999999999
Q ss_pred eccCCCchHHHHHHcCCC-CHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCCCc-
Q 042823 104 ELCEGGDLFDRIIAKGYN-SERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQ- 181 (477)
Q Consensus 104 e~~~gg~L~~~l~~~~~~-~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~- 181 (477)
||- ..+|..+|.+.... +...++.+..|||.++.++|++||||.||||.|+|++ .|.+||||||+|....+..
T Consensus 440 E~G-d~DL~kiL~k~~~~~~~~~lk~ywkqML~aV~~IH~~gIVHSDLKPANFLlV----kG~LKLIDFGIA~aI~~DTT 514 (677)
T KOG0596|consen 440 ECG-DIDLNKILKKKKSIDPDWFLKFYWKQMLLAVKTIHQHGIVHSDLKPANFLLV----KGRLKLIDFGIANAIQPDTT 514 (677)
T ss_pred ecc-cccHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHhceeecCCCcccEEEE----eeeEEeeeechhcccCcccc
Confidence 975 45999999887654 4367889999999999999999999999999999883 5789999999998775432
Q ss_pred --ceecccccccccchhhhhh------------hcCCccchHhHHHHHHHHhhCCCCCCCCC-hhhHHHHHHcCCccCCC
Q 042823 182 --VYRDIVGSGFYIAPEVLRR------------RYGKEIDIWSAGVILYILLSGVPPFWAET-KKGTYDAILQGEIDFDT 246 (477)
Q Consensus 182 --~~~~~~gt~~y~aPE~~~~------------~~~~~~DiwslG~il~~l~tg~~pf~~~~-~~~~~~~i~~~~~~~~~ 246 (477)
.....+||+.|||||.+.. +.+.++||||||||||+|+.|++||..-. ...-+..|..-....
T Consensus 515 sI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~n~~aKl~aI~~P~~~I-- 592 (677)
T KOG0596|consen 515 SIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQIINQIAKLHAITDPNHEI-- 592 (677)
T ss_pred ceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHHHHHHHHHhhcCCCccc--
Confidence 3356799999999998841 25789999999999999999999995432 122223333322211
Q ss_pred CCCCCCC--HHHHHHHHHhcccCccccCCHHHHhcCcccCc
Q 042823 247 DPWPSIS--STAKDLVRRMLTKDPKRRITAAQVLEHPWLRE 285 (477)
Q Consensus 247 ~~~~~~~--~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~ 285 (477)
++|.+| .++.++++.||+.||.+|||+.++|+|||+..
T Consensus 593 -efp~~~~~~~li~~mK~CL~rdPkkR~si~eLLqhpFl~~ 632 (677)
T KOG0596|consen 593 -EFPDIPENDELIDVMKCCLARDPKKRWSIPELLQHPFLQI 632 (677)
T ss_pred -cccCCCCchHHHHHHHHHHhcCcccCCCcHHHhcCccccc
Confidence 122222 34999999999999999999999999999975
|
|
| >KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-45 Score=365.71 Aligned_cols=259 Identities=29% Similarity=0.436 Sum_probs=217.5
Q ss_pred CccccccccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEE
Q 042823 12 PILGKAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKS 91 (477)
Q Consensus 12 ~~~~~~~~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~ 91 (477)
...++..+.=..+++|.+.|.+|||+.||+|.+...|..||+|++... +......+.+||.+++.|.+|||||.+++
T Consensus 26 ~~~G~~~~Vg~~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~---de~~L~~v~~EI~~MK~L~gh~nIV~yid 102 (738)
T KOG1989|consen 26 YFVGQTFTVGSHRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVN---DEEALNAVKREIDIMKLLSGHKNIVSYID 102 (738)
T ss_pred CCCceEEEECCEEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecC---CHHHHHHHHHHHHHHHHhcCCCceeeEec
Confidence 345555556666899999999999999999999888899999998654 44667889999999999999999999999
Q ss_pred E-EE---e---CCeEEEEEeccCCCchHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHcC--CeeccCCCCceeeeec
Q 042823 92 T-YE---D---ETAVHVVMELCEGGDLFDRIIA--KGYNSERDAATVLRAIVNAVNVCHSMG--VMHRDLKPENFSFISR 160 (477)
Q Consensus 92 ~-~~---~---~~~~~lv~e~~~gg~L~~~l~~--~~~~~~~~~~~i~~qil~~L~~lH~~~--ivH~dlkp~Nil~~~~ 160 (477)
. .. . .-.++|.||||.||+|.+++.. +.+|+|.++.+|++++++|+.+||..+ |||||||-+|||+
T Consensus 103 ss~~~~~~~~~~~EvllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDLKiENvLl--- 179 (738)
T KOG1989|consen 103 SSAINRSSNNGVWEVLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDLKIENVLL--- 179 (738)
T ss_pred cccccccCCCceeEEEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcCCCccchhhhhhhheEE---
Confidence 3 32 1 1347899999999999999985 456999999999999999999999998 9999999999999
Q ss_pred CCCCCEEEeecCCccccCCCcc-e---------ecccccccccchhhhh----hhcCCccchHhHHHHHHHHhhCCCCCC
Q 042823 161 DDNALLKVTDFGSALLFEEGQV-Y---------RDIVGSGFYIAPEVLR----RRYGKEIDIWSAGVILYILLSGVPPFW 226 (477)
Q Consensus 161 ~~~~~~kl~Dfg~a~~~~~~~~-~---------~~~~gt~~y~aPE~~~----~~~~~~~DiwslG~il~~l~tg~~pf~ 226 (477)
..++.+||||||.|+....... . -....|+.|+|||++. ...+.|+|||||||+||-|+....||.
T Consensus 180 s~~g~~KLCDFGSatt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe 259 (738)
T KOG1989|consen 180 SADGNYKLCDFGSATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFE 259 (738)
T ss_pred cCCCCEEeCcccccccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcC
Confidence 7788999999998865422221 0 1134699999999984 358999999999999999999999996
Q ss_pred CCChhhHHHHHHcCCccCCCCCCCCCCHHHHHHHHHhcccCccccCCHHHHhcCcc
Q 042823 227 AETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPW 282 (477)
Q Consensus 227 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~ 282 (477)
.... .+|+.+.+.+++. |.+|..+++||+.||+.||++||++.|++.+-+
T Consensus 260 ~sg~----laIlng~Y~~P~~--p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~ 309 (738)
T KOG1989|consen 260 ESGK----LAILNGNYSFPPF--PNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIF 309 (738)
T ss_pred cCcc----eeEEeccccCCCC--ccHHHHHHHHHHHHhccCcccCCCHHHHHHHHH
Confidence 6532 4677888777654 789999999999999999999999999987654
|
|
| >cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-44 Score=337.94 Aligned_cols=255 Identities=28% Similarity=0.402 Sum_probs=211.4
Q ss_pred ccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEE
Q 042823 21 VMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVH 100 (477)
Q Consensus 21 ~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~ 100 (477)
..++|++.+.||+|+||.||+|.++.+++.||+|++..... .....+.+|+.++..+ +||||+++++++.....+|
T Consensus 7 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~---~~~~~~~~e~~~l~~~-~h~~ii~~~~~~~~~~~~~ 82 (267)
T cd06646 7 PQHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPG---DDFSLIQQEIFMVKEC-KHCNIVAYFGSYLSREKLW 82 (267)
T ss_pred chhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCcc---chHHHHHHHHHHHHhc-CCCCeeeeeEEEEeCCEEE
Confidence 35689999999999999999999999999999999864432 2334678899999988 7999999999999999999
Q ss_pred EEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCCC
Q 042823 101 VVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEG 180 (477)
Q Consensus 101 lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~ 180 (477)
+||||+++++|.+++...+.+++..+..++.|++.||.|||+.||+||||+|+||++ +.++.+||+|||++......
T Consensus 83 iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nill---~~~~~~~l~dfg~~~~~~~~ 159 (267)
T cd06646 83 ICMEYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLAYLHSKGKMHRDIKGANILL---TDNGDVKLADFGVAAKITAT 159 (267)
T ss_pred EEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEE---CCCCCEEECcCccceeeccc
Confidence 999999999999999888889999999999999999999999999999999999999 67788999999998765332
Q ss_pred c-ceecccccccccchhhhh----hhcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCC-CCCCCCCH
Q 042823 181 Q-VYRDIVGSGFYIAPEVLR----RRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDT-DPWPSISS 254 (477)
Q Consensus 181 ~-~~~~~~gt~~y~aPE~~~----~~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~-~~~~~~~~ 254 (477)
. ......|++.|+|||.+. ..++.++|+||+||++|+|++|.+||...........+.......+. .....++.
T Consensus 160 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (267)
T cd06646 160 IAKRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSNFQPPKLKDKTKWSS 239 (267)
T ss_pred ccccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhheeeecCCCCCCCCccccccCH
Confidence 2 223457889999999874 34778999999999999999999999655433332222222221111 11134689
Q ss_pred HHHHHHHHhcccCccccCCHHHHhcCcc
Q 042823 255 TAKDLVRRMLTKDPKRRITAAQVLEHPW 282 (477)
Q Consensus 255 ~~~~li~~~l~~dp~~R~s~~~~l~h~~ 282 (477)
.+.+||++||+.+|++|||++++++|+|
T Consensus 240 ~~~~li~~~l~~~P~~Rp~~~~il~~l~ 267 (267)
T cd06646 240 TFHNFVKISLTKNPKKRPTAERLLTHLF 267 (267)
T ss_pred HHHHHHHHHhhCChhhCcCHHHHhcCCC
Confidence 9999999999999999999999999997
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated |
| >cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-44 Score=340.49 Aligned_cols=256 Identities=27% Similarity=0.478 Sum_probs=212.5
Q ss_pred ccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 042823 23 LHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVV 102 (477)
Q Consensus 23 ~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~lv 102 (477)
++|++.+.||+|+||.||+|.++.+++.||+|++...... ......+.+|+.++..+ +||||+++++++.....+++|
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~~v 78 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDD-PVIKKIALREIRMLKQL-KHPNLVNLIEVFRRKRKLHLV 78 (286)
T ss_pred CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccC-ccccHHHHHHHHHHHhC-CCCCEeeeeeEEeeCCEEEEE
Confidence 4799999999999999999999999999999998654321 12234577899999999 799999999999999999999
Q ss_pred EeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCCCc-
Q 042823 103 MELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQ- 181 (477)
Q Consensus 103 ~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~- 181 (477)
|||+++++|..++.....+++..+..++.|++.||.|||+.|++||||||+||++ +.++.+||+|||++.......
T Consensus 79 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~ql~~~l~~LH~~~i~H~dl~p~nil~---~~~~~~~l~dfg~~~~~~~~~~ 155 (286)
T cd07847 79 FEYCDHTVLNELEKNPRGVPEHLIKKIIWQTLQAVNFCHKHNCIHRDVKPENILI---TKQGQIKLCDFGFARILTGPGD 155 (286)
T ss_pred EeccCccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCChhhEEE---cCCCcEEECccccceecCCCcc
Confidence 9999998887777666779999999999999999999999999999999999999 677889999999998765433
Q ss_pred ceecccccccccchhhhhh--hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCc-----------------
Q 042823 182 VYRDIVGSGFYIAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEI----------------- 242 (477)
Q Consensus 182 ~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~----------------- 242 (477)
......++..|+|||++.+ .++.++||||+||++|+|++|.+||.+....+....+.....
T Consensus 156 ~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (286)
T cd07847 156 DYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIFSTNQFFK 235 (286)
T ss_pred cccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcccccccc
Confidence 2334568889999999864 478899999999999999999999987765544433322100
Q ss_pred --cCCC--------CCCCCCCHHHHHHHHHhcccCccccCCHHHHhcCccc
Q 042823 243 --DFDT--------DPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWL 283 (477)
Q Consensus 243 --~~~~--------~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~ 283 (477)
..+. ..++.++..+.+||.+||+.+|++|||+.+++.||||
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~~~f 286 (286)
T cd07847 236 GLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLEHPYF 286 (286)
T ss_pred cccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhcCCCC
Confidence 0000 0124578899999999999999999999999999997
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio |
| >cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.8e-44 Score=342.38 Aligned_cols=258 Identities=24% Similarity=0.330 Sum_probs=213.2
Q ss_pred ccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 042823 23 LHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVV 102 (477)
Q Consensus 23 ~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~lv 102 (477)
++|++.+.||+|+||.||+|.+..++..+|+|.+.... .......+.+|++++.++ +||||+++++++..++.+|+|
T Consensus 1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv 77 (308)
T cd06615 1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEI--KPAIRNQIIRELKVLHEC-NSPYIVGFYGAFYSDGEISIC 77 (308)
T ss_pred CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEecccc--CHHHHHHHHHHHHHHHhC-CCCCCCeEEEEEeeCCEEEEE
Confidence 36999999999999999999999999999999886432 223445678899999999 799999999999999999999
Q ss_pred EeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH-cCCeeccCCCCceeeeecCCCCCEEEeecCCccccCCCc
Q 042823 103 MELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHS-MGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQ 181 (477)
Q Consensus 103 ~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~-~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~ 181 (477)
|||++|++|.+++.+.+.+++..+..++.|++.||.|||+ .+++||||||+||++ +.++.+||+|||++......
T Consensus 78 ~ey~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dl~p~nil~---~~~~~~~l~dfg~~~~~~~~- 153 (308)
T cd06615 78 MEHMDGGSLDQVLKKAGRIPENILGKISIAVLRGLTYLREKHKIMHRDVKPSNILV---NSRGEIKLCDFGVSGQLIDS- 153 (308)
T ss_pred eeccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCCEEECCCChHHEEE---ecCCcEEEccCCCccccccc-
Confidence 9999999999999988889999999999999999999997 599999999999999 66788999999988654322
Q ss_pred ceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccC----------------
Q 042823 182 VYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDF---------------- 244 (477)
Q Consensus 182 ~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~---------------- 244 (477)
......|++.|+|||++.+ .++.++|+|||||++|+|++|..||...........+.......
T Consensus 154 ~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (308)
T cd06615 154 MANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELEAMFGRPVSEGEAKESHRPVSGHPPDS 233 (308)
T ss_pred ccccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchhhHHHhhcCccccccccCCcccccCCCCCc
Confidence 2244578999999999865 57889999999999999999999997654333222111110000
Q ss_pred ------------------CCCCCCCCCHHHHHHHHHhcccCccccCCHHHHhcCcccCcCC
Q 042823 245 ------------------DTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESG 287 (477)
Q Consensus 245 ------------------~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~~ 287 (477)
+..+...++.++++|+.+||..+|++|||+.++++||||....
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~~ 294 (308)
T cd06615 234 PRPMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKHPFIKRAE 294 (308)
T ss_pred cchhhHHHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcChhhhhcc
Confidence 0011123678999999999999999999999999999997653
|
Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down |
| >cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-44 Score=342.92 Aligned_cols=259 Identities=28% Similarity=0.489 Sum_probs=220.8
Q ss_pred ccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 042823 23 LHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVV 102 (477)
Q Consensus 23 ~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~lv 102 (477)
+.|.+.+.||+|+||.||+|.+..+++.||+|.+.............+.+|+.++..+ +||||+++++.+..++.+|+|
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~~~~~~lv 79 (305)
T cd05609 1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFA-ENPFVVSMFCSFETKRHLCMV 79 (305)
T ss_pred CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhC-CCCCeeeeEEEEecCCEEEEE
Confidence 3689999999999999999999999999999998765433334456778899999888 799999999999999999999
Q ss_pred EeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCCC--
Q 042823 103 MELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEG-- 180 (477)
Q Consensus 103 ~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~-- 180 (477)
|||++|++|.+++...+.+++..+..++.|++.||.|||++|++||||||+||++ +..+.+||+|||++......
T Consensus 80 ~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~NIll---~~~~~~~l~dfg~~~~~~~~~~ 156 (305)
T cd05609 80 MEYVEGGDCATLLKNIGALPVDMARMYFAETVLALEYLHNYGIVHRDLKPDNLLI---TSMGHIKLTDFGLSKIGLMSLT 156 (305)
T ss_pred EecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHEEE---CCCCCEEEeeCCCccccCcCcc
Confidence 9999999999999888889999999999999999999999999999999999999 67889999999987632100
Q ss_pred --------------cceecccccccccchhhhh-hhcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCC
Q 042823 181 --------------QVYRDIVGSGFYIAPEVLR-RRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFD 245 (477)
Q Consensus 181 --------------~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~ 245 (477)
.......|++.|+|||.+. ..++.++|+|||||++|+|++|..||.+....+....+..+....+
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~~~~~~~~~~~~~~~ 236 (305)
T cd05609 157 TNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIEWP 236 (305)
T ss_pred ccccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcccCCC
Confidence 0011235788899999975 4688999999999999999999999998877777777766654444
Q ss_pred CCCCCCCCHHHHHHHHHhcccCccccCC---HHHHhcCcccCcC
Q 042823 246 TDPWPSISSTAKDLVRRMLTKDPKRRIT---AAQVLEHPWLRES 286 (477)
Q Consensus 246 ~~~~~~~~~~~~~li~~~l~~dp~~R~s---~~~~l~h~~~~~~ 286 (477)
... +.++.++.++|.+||+.+|++||+ +.++|+||||...
T Consensus 237 ~~~-~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~~~~~~~ 279 (305)
T cd05609 237 EGD-EALPADAQDLISRLLRQNPLERLGTGGAFEVKQHRFFLGL 279 (305)
T ss_pred Ccc-ccCCHHHHHHHHHHhccChhhccCccCHHHHHhCccccCC
Confidence 332 267899999999999999999998 7999999999653
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a |
| >cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-43 Score=337.01 Aligned_cols=258 Identities=26% Similarity=0.385 Sum_probs=216.7
Q ss_pred ccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 042823 23 LHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVV 102 (477)
Q Consensus 23 ~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~lv 102 (477)
+.|++.+.||+|+||.||+|.+..++..+++|.+.... ......+.+|+.+++.+ +||||+++++++......|+|
T Consensus 5 ~~~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~---~~~~~~~~~e~~~l~~l-~h~~ii~~~~~~~~~~~~~~v 80 (282)
T cd06643 5 EFWEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKS---EEELEDYMVEIDILASC-DHPNIVKLLDAFYYENNLWIL 80 (282)
T ss_pred HHHHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCC---HHHHHHHHHHHHHHHHC-CCCCeeeEEEEEeeCCEEEEE
Confidence 34889999999999999999999999999999885432 23456678899999999 799999999999999999999
Q ss_pred EeccCCCchHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCCC-
Q 042823 103 MELCEGGDLFDRIIA-KGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEG- 180 (477)
Q Consensus 103 ~e~~~gg~L~~~l~~-~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~- 180 (477)
|||+++++|..++.+ ...+++..+..++.|++.||.|||+.|++||||||+||++ +.++.+||+|||++......
T Consensus 81 ~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~~i~H~dlkp~nili---~~~~~~kl~dfg~~~~~~~~~ 157 (282)
T cd06643 81 IEFCAGGAVDAVMLELERPLTEPQIRVVCKQTLEALNYLHENKIIHRDLKAGNILF---TLDGDIKLADFGVSAKNTRTI 157 (282)
T ss_pred EEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEE---ccCCCEEEccccccccccccc
Confidence 999999999887765 4568999999999999999999999999999999999999 67788999999988654332
Q ss_pred cceecccccccccchhhhh------hhcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCCCCH
Q 042823 181 QVYRDIVGSGFYIAPEVLR------RRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISS 254 (477)
Q Consensus 181 ~~~~~~~gt~~y~aPE~~~------~~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 254 (477)
.......|++.|+|||++. ..++.++||||+||++|+|++|.+||...+.......+......... ....++.
T Consensus 158 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 236 (282)
T cd06643 158 QRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTLA-QPSRWSS 236 (282)
T ss_pred cccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHHHHHHHhhcCCCCCC-CccccCH
Confidence 2223457899999999973 23678999999999999999999999877766666665544332211 1235789
Q ss_pred HHHHHHHHhcccCccccCCHHHHhcCcccCcCCC
Q 042823 255 TAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGE 288 (477)
Q Consensus 255 ~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~~~ 288 (477)
.+++||.+||+.+|++|||+.++++|||++....
T Consensus 237 ~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~~ 270 (282)
T cd06643 237 EFKDFLKKCLEKNVDARWTTTQLLQHPFVTVNSN 270 (282)
T ss_pred HHHHHHHHHccCChhhCcCHHHHhcCCCEeccCC
Confidence 9999999999999999999999999999987543
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. |
| >cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-44 Score=345.01 Aligned_cols=259 Identities=31% Similarity=0.553 Sum_probs=221.6
Q ss_pred ccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 042823 23 LHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVV 102 (477)
Q Consensus 23 ~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~lv 102 (477)
++|++.+.||+|++|.||+|.+..+++.||+|.+.+...........+.+|+.++..+ +||||+++++.+......|+|
T Consensus 1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~lv 79 (316)
T cd05574 1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATL-DHPFLPTLYASFQTETYLCLV 79 (316)
T ss_pred CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhC-CCCCchhheeeeecCCEEEEE
Confidence 4799999999999999999999999999999999765443334556788999999999 699999999999999999999
Q ss_pred EeccCCCchHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCCC
Q 042823 103 MELCEGGDLFDRIIAK--GYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEG 180 (477)
Q Consensus 103 ~e~~~gg~L~~~l~~~--~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~ 180 (477)
|||+.|++|.+++... ..+++..+..++.|++.||.|||+.|++||||||+||++ +.++.++|+|||++......
T Consensus 80 ~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili---~~~~~~~l~dfg~~~~~~~~ 156 (316)
T cd05574 80 MDYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLLGIVYRDLKPENILL---HESGHIMLSDFDLSKQSDVE 156 (316)
T ss_pred EEecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHCCeeccCCChHHeEE---cCCCCEEEeecchhhccccc
Confidence 9999999999998764 568999999999999999999999999999999999999 66788999999987654221
Q ss_pred c------------------------------ceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCC
Q 042823 181 Q------------------------------VYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAET 229 (477)
Q Consensus 181 ~------------------------------~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~ 229 (477)
. ......||..|+|||++.+ .++.++||||||+++|+|++|..||.+..
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~ 236 (316)
T cd05574 157 PPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSN 236 (316)
T ss_pred ccccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCCc
Confidence 1 1123468889999999865 57889999999999999999999998887
Q ss_pred hhhHHHHHHcCCccCCCCCCCCCCHHHHHHHHHhcccCccccCC----HHHHhcCcccCcCC
Q 042823 230 KKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRIT----AAQVLEHPWLRESG 287 (477)
Q Consensus 230 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s----~~~~l~h~~~~~~~ 287 (477)
....+..+......++.. ..+++.++++|.+||..+|++||| +.++++||||+...
T Consensus 237 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~~~~~~~~~ 296 (316)
T cd05574 237 RDETFSNILKKEVTFPGS--PPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQHPFFRGVN 296 (316)
T ss_pred hHHHHHHHhcCCccCCCc--cccCHHHHHHHHHHccCCHhHCCCchhhHHHHHcCchhhcCC
Confidence 777777776655444332 237899999999999999999999 99999999998653
|
Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin |
| >cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-44 Score=340.33 Aligned_cols=254 Identities=29% Similarity=0.441 Sum_probs=207.4
Q ss_pred cccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEE
Q 042823 24 HYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVVM 103 (477)
Q Consensus 24 ~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~lv~ 103 (477)
+|++.+.||+|++|.||+|.++.+++.||+|++..... .......+.+|+.++..+ +||||+++++++.++..+|+||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~~v~ 78 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESE-EEGVPSTAIREISLLKEL-QHPNIVCLQDVLMQESRLYLIF 78 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccc-cCCchHHHHHHHHHHHhc-CCCCEeeeEEEEeeCCeEEEEE
Confidence 58899999999999999999999999999999864322 122345678899999999 6999999999999999999999
Q ss_pred eccCCCchHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCCC
Q 042823 104 ELCEGGDLFDRIIAK---GYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEG 180 (477)
Q Consensus 104 e~~~gg~L~~~l~~~---~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~ 180 (477)
||++ ++|.+++... ..+++..++.++.|++.||.|||++|++||||||+||++ +.++.+||+|||++......
T Consensus 79 e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~---~~~~~~~l~dfg~~~~~~~~ 154 (285)
T cd07861 79 EFLS-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRRVLHRDLKPQNLLI---DNKGVIKLADFGLARAFGIP 154 (285)
T ss_pred ecCC-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEE---cCCCcEEECcccceeecCCC
Confidence 9997 5888887653 468999999999999999999999999999999999999 67889999999998755322
Q ss_pred c-ceecccccccccchhhhhh--hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCc---------------
Q 042823 181 Q-VYRDIVGSGFYIAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEI--------------- 242 (477)
Q Consensus 181 ~-~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~--------------- 242 (477)
. ......+++.|+|||++.+ .++.++|||||||++|+|+||.+||.+.........+.....
T Consensus 155 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (285)
T cd07861 155 VRVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGVTSLPD 234 (285)
T ss_pred cccccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhcchhhHH
Confidence 1 2233467899999999864 478899999999999999999999987654433322211100
Q ss_pred ----------cCCCCCCCCCCHHHHHHHHHhcccCccccCCHHHHhcCccc
Q 042823 243 ----------DFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWL 283 (477)
Q Consensus 243 ----------~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~ 283 (477)
......++.+++++.++|.+||..||.+|||+.++++||||
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~~~~~ 285 (285)
T cd07861 235 YKNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALNHPYF 285 (285)
T ss_pred HHhhccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhcCCCC
Confidence 00011134578999999999999999999999999999997
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 |
| >cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-43 Score=338.01 Aligned_cols=261 Identities=26% Similarity=0.370 Sum_probs=217.8
Q ss_pred cccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeE
Q 042823 20 DVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAV 99 (477)
Q Consensus 20 ~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~ 99 (477)
...+.|++.+.||+|+||.||+|.+..+++.+|+|.+... .......+.+|+.++..+ +||||+++++++..++.+
T Consensus 9 ~~~~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~ 84 (292)
T cd06644 9 DPNEVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETK---SEEELEDYMVEIEILATC-NHPYIVKLLGAFYWDGKL 84 (292)
T ss_pred CcchhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccC---CHHHHHHHHHHHHHHHhC-CCCcEeeeEEEEEeCCeE
Confidence 3457899999999999999999999999999999998643 233456678899999998 699999999999999999
Q ss_pred EEEEeccCCCchHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccC
Q 042823 100 HVVMELCEGGDLFDRIIA-KGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFE 178 (477)
Q Consensus 100 ~lv~e~~~gg~L~~~l~~-~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~ 178 (477)
|+||||++|++|..++.+ ...+++..+..++.|++.||.|||++|++||||||+||++ +.++.+||+|||++....
T Consensus 85 ~lv~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nili---~~~~~~kl~dfg~~~~~~ 161 (292)
T cd06644 85 WIMIEFCPGGAVDAIMLELDRGLTEPQIQVICRQMLEALQYLHSMKIIHRDLKAGNVLL---TLDGDIKLADFGVSAKNV 161 (292)
T ss_pred EEEEecCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcCCeeecCCCcceEEE---cCCCCEEEccCccceecc
Confidence 999999999999887765 4568999999999999999999999999999999999999 667889999999886543
Q ss_pred CC-cceecccccccccchhhhh------hhcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCC
Q 042823 179 EG-QVYRDIVGSGFYIAPEVLR------RRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPS 251 (477)
Q Consensus 179 ~~-~~~~~~~gt~~y~aPE~~~------~~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 251 (477)
.. .......+++.|+|||++. ..++.++|||||||++|+|++|.+||...+.......+.....+.. .....
T Consensus 162 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~ 240 (292)
T cd06644 162 KTLQRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTL-SQPSK 240 (292)
T ss_pred ccccccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHHHHHHHHhcCCCccC-CCCcc
Confidence 22 2223456889999999874 2367899999999999999999999987666555555544332211 11245
Q ss_pred CCHHHHHHHHHhcccCccccCCHHHHhcCcccCcCCC
Q 042823 252 ISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGE 288 (477)
Q Consensus 252 ~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~~~ 288 (477)
++.++.++|.+||..+|++||++.++++||||.....
T Consensus 241 ~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~~ 277 (292)
T cd06644 241 WSMEFRDFLKTALDKHPETRPSAAQLLEHPFVSSVTS 277 (292)
T ss_pred cCHHHHHHHHHHhcCCcccCcCHHHHhcCcccccccc
Confidence 7889999999999999999999999999999976543
|
Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. |
| >PHA02988 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-44 Score=338.05 Aligned_cols=241 Identities=18% Similarity=0.194 Sum_probs=206.8
Q ss_pred ccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEe----CCeEEEEEe
Q 042823 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYED----ETAVHVVME 104 (477)
Q Consensus 29 ~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~----~~~~~lv~e 104 (477)
..||+|++|.||+|.+ +|+.||+|.+.............+.+|+.++.++ +||||+++++++.+ ...+++|||
T Consensus 26 ~~i~~g~~~~v~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~~~g~~~~~~~~~~~~~lv~E 102 (283)
T PHA02988 26 VLIKENDQNSIYKGIF--NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRI-DSNNILKIYGFIIDIVDDLPRLSLILE 102 (283)
T ss_pred eEEeeCCceEEEEEEE--CCEEEEEEeccccccccHHHHHHHHHHHHHHHhc-CCCCEEEEeeeEEecccCCCceEEEEE
Confidence 5699999999999987 6889999998765433333356788999999999 79999999999876 457899999
Q ss_pred ccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHc-CCeeccCCCCceeeeecCCCCCEEEeecCCccccCCCcce
Q 042823 105 LCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSM-GVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVY 183 (477)
Q Consensus 105 ~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~-~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~ 183 (477)
||+||+|.+++.+.+.++......++.|++.||.|||+. +++||||||+||++ +.++.+||+|||++.......
T Consensus 103 y~~~g~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~Hrdlkp~nill---~~~~~~kl~dfg~~~~~~~~~-- 177 (283)
T PHA02988 103 YCTRGYLREVLDKEKDLSFKTKLDMAIDCCKGLYNLYKYTNKPYKNLTSVSFLV---TENYKLKIICHGLEKILSSPP-- 177 (283)
T ss_pred eCCCCcHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHhcCCCCCCcCChhhEEE---CCCCcEEEcccchHhhhcccc--
Confidence 999999999999888899999999999999999999984 99999999999999 778899999999987654322
Q ss_pred ecccccccccchhhhhh---hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCCCCHHHHHHH
Q 042823 184 RDIVGSGFYIAPEVLRR---RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLV 260 (477)
Q Consensus 184 ~~~~gt~~y~aPE~~~~---~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li 260 (477)
....|++.|+|||++.+ .++.++|||||||++|+|++|..||.+.+..+....+..+....+.+ ..+++.+++++
T Consensus 178 ~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~--~~~~~~l~~li 255 (283)
T PHA02988 178 FKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTKEIYDLIINKNNSLKLP--LDCPLEIKCIV 255 (283)
T ss_pred ccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCCCCCCC--CcCcHHHHHHH
Confidence 24578999999999864 68999999999999999999999999888777777776554433221 36789999999
Q ss_pred HHhcccCccccCCHHHHhc
Q 042823 261 RRMLTKDPKRRITAAQVLE 279 (477)
Q Consensus 261 ~~~l~~dp~~R~s~~~~l~ 279 (477)
.+||+.||++|||+.++++
T Consensus 256 ~~cl~~dp~~Rps~~ell~ 274 (283)
T PHA02988 256 EACTSHDSIKRPNIKEILY 274 (283)
T ss_pred HHHhcCCcccCcCHHHHHH
Confidence 9999999999999999985
|
|
| >cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-44 Score=337.78 Aligned_cols=253 Identities=28% Similarity=0.461 Sum_probs=217.1
Q ss_pred cccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEE
Q 042823 24 HYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVVM 103 (477)
Q Consensus 24 ~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~lv~ 103 (477)
.|++.++||+|+||.||+|.+..+++.||+|++.+...........+.+|++++.++ +||||+++++++..+...|+|+
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~ 79 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQEL-NHPFLVNLWYSFQDEENMYLVV 79 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhC-CCCChHHHHHhhcCCCeEEEEE
Confidence 489999999999999999999999999999999765443334567888999999999 7999999999999999999999
Q ss_pred eccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCCCcce
Q 042823 104 ELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVY 183 (477)
Q Consensus 104 e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~ 183 (477)
||+.|++|.+++.....+++..+..++.|++.||.|||++|++|+||+|+||++ +.++.++|+|||.+.........
T Consensus 80 e~~~~~~L~~~l~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~---~~~~~~~l~d~~~~~~~~~~~~~ 156 (258)
T cd05578 80 DLLLGGDLRYHLSQKVKFSEEQVKFWICEIVLALEYLHSKGIIHRDIKPDNILL---DEQGHVHITDFNIATKVTPDTLT 156 (258)
T ss_pred eCCCCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEE---cCCCCEEEeecccccccCCCccc
Confidence 999999999999888789999999999999999999999999999999999999 77888999999998876554344
Q ss_pred ecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCCh--hhHHHHHHcCCccCCCCCCCCCCHHHHHHH
Q 042823 184 RDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETK--KGTYDAILQGEIDFDTDPWPSISSTAKDLV 260 (477)
Q Consensus 184 ~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~--~~~~~~i~~~~~~~~~~~~~~~~~~~~~li 260 (477)
....|+..|+|||++.+ .++.++|+||+|+++|+|++|..||..... .......... ......+.++..+.++|
T Consensus 157 ~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~i 233 (258)
T cd05578 157 TSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQIRAKQET---ADVLYPATWSTEAIDAI 233 (258)
T ss_pred cccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCccHHHHHHHHhcc---ccccCcccCcHHHHHHH
Confidence 45678899999999864 478999999999999999999999987664 2222222221 11122245789999999
Q ss_pred HHhcccCccccCCH--HHHhcCccc
Q 042823 261 RRMLTKDPKRRITA--AQVLEHPWL 283 (477)
Q Consensus 261 ~~~l~~dp~~R~s~--~~~l~h~~~ 283 (477)
.+||+.||.+||++ .++++||||
T Consensus 234 ~~~l~~~p~~R~~~~~~~l~~~~~~ 258 (258)
T cd05578 234 NKLLERDPQKRLGDNLKDLKNHPYF 258 (258)
T ss_pred HHHccCChhHcCCccHHHHhcCCCC
Confidence 99999999999999 999999997
|
Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. |
| >cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-43 Score=334.39 Aligned_cols=255 Identities=27% Similarity=0.426 Sum_probs=216.3
Q ss_pred ccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 042823 23 LHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVV 102 (477)
Q Consensus 23 ~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~lv 102 (477)
++|++.+.||.|+||+||+|.+..++..+|+|++...... .....+.+|+.+++.+ +||||+++++.+.....+|+|
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~iv 77 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQ--TSVDELRKEVQAMSQC-NHPNVVKYYTSFVVGDELWLV 77 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcc--hHHHHHHHHHHHHHhc-CCCCEEEEEEEEeeCCEEEEE
Confidence 4799999999999999999999889999999988643322 2557788999999888 799999999999999999999
Q ss_pred EeccCCCchHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCC
Q 042823 103 MELCEGGDLFDRIIAK---GYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEE 179 (477)
Q Consensus 103 ~e~~~gg~L~~~l~~~---~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~ 179 (477)
||+++|++|.+++... ..+++..+..++.|++.||.|||+.|++||||+|+||++ ++++.++|+|||++.....
T Consensus 78 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~i~h~~l~p~ni~~---~~~~~~~l~df~~~~~~~~ 154 (267)
T cd06610 78 MPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNGQIHRDIKAGNILL---GEDGSVKIADFGVSASLAD 154 (267)
T ss_pred EeccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEE---cCCCCEEEcccchHHHhcc
Confidence 9999999999999764 458999999999999999999999999999999999999 6678899999998876543
Q ss_pred Ccc-----eecccccccccchhhhhh--hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCC--CCC
Q 042823 180 GQV-----YRDIVGSGFYIAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTD--PWP 250 (477)
Q Consensus 180 ~~~-----~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~--~~~ 250 (477)
... .....|++.|+|||++.. .++.++|+|||||++|+|++|..||...+.......+.......... .+.
T Consensus 155 ~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (267)
T cd06610 155 GGDRTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMKVLMLTLQNDPPSLETGADYK 234 (267)
T ss_pred CccccccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhhhHHHHhcCCCCCcCCccccc
Confidence 321 133468899999999864 47889999999999999999999998776666565555543221111 124
Q ss_pred CCCHHHHHHHHHhcccCccccCCHHHHhcCccc
Q 042823 251 SISSTAKDLVRRMLTKDPKRRITAAQVLEHPWL 283 (477)
Q Consensus 251 ~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~ 283 (477)
.+++.+.+++.+||..||++|||+.++++||||
T Consensus 235 ~~~~~~~~li~~~l~~~p~~Rp~~~~ll~~p~~ 267 (267)
T cd06610 235 KYSKSFRKMISLCLQKDPSKRPTAEELLKHKFF 267 (267)
T ss_pred cccHHHHHHHHHHcCCChhhCcCHHHHhhCCCC
Confidence 678999999999999999999999999999997
|
Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 |
| >cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-44 Score=338.01 Aligned_cols=252 Identities=30% Similarity=0.490 Sum_probs=210.2
Q ss_pred ccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEeccCCCc
Q 042823 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVVMELCEGGD 110 (477)
Q Consensus 31 iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~lv~e~~~gg~ 110 (477)
||+|+||+||+|.+..+|+.||+|++.+...........+.+|+.+++.+ +||||+++++++...+.+|+||||++|++
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~lv~e~~~~~~ 79 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKV-SSRFIVSLAYAFETKDDLCLVMTLMNGGD 79 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhC-CCCCEeeeeeEEecCCeEEEEEecCCCCc
Confidence 79999999999999999999999998754322223344567899999999 69999999999999999999999999999
Q ss_pred hHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCCCcceecccc
Q 042823 111 LFDRIIAKG--YNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVG 188 (477)
Q Consensus 111 L~~~l~~~~--~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~g 188 (477)
|.+++...+ .+++..+..++.|++.||.|||++|++||||+|+||++ +.++.+||+|||.+.............+
T Consensus 80 L~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~Nil~---~~~~~~~l~dfg~~~~~~~~~~~~~~~~ 156 (277)
T cd05577 80 LKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRRIVYRDLKPENVLL---DDHGNVRISDLGLAVELKGGKKIKGRAG 156 (277)
T ss_pred HHHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEE---CCCCCEEEccCcchhhhccCCccccccC
Confidence 999998765 68999999999999999999999999999999999999 6778899999998876554333345578
Q ss_pred cccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCCCCHHHHHHHHHhcccC
Q 042823 189 SGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKD 267 (477)
Q Consensus 189 t~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~d 267 (477)
+..|+|||++.+ .++.++||||+||++|+|++|..||...........+.......+....+.+++.+.++|.+||+.+
T Consensus 157 ~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~ 236 (277)
T cd05577 157 TPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEELKRRTLEMAVEYPDKFSPEAKDLCEALLQKD 236 (277)
T ss_pred CCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccccHHHHHhccccccccCCccCCHHHHHHHHHHccCC
Confidence 889999999864 5788999999999999999999999776543233333333332333333567999999999999999
Q ss_pred ccccC-----CHHHHhcCcccCcC
Q 042823 268 PKRRI-----TAAQVLEHPWLRES 286 (477)
Q Consensus 268 p~~R~-----s~~~~l~h~~~~~~ 286 (477)
|++|| ++.++++||||...
T Consensus 237 p~~R~~~~~~~~~~ll~h~~~~~~ 260 (277)
T cd05577 237 PEKRLGCRGGSADEVREHPLFKDL 260 (277)
T ss_pred hhHccCCCcccHHHHHhChhhhcC
Confidence 99999 89999999999753
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of |
| >cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-43 Score=333.96 Aligned_cols=253 Identities=28% Similarity=0.464 Sum_probs=213.6
Q ss_pred cccccccccccCCeEEEEEEEccCCceEEEEEeecCCccc------hhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCC
Q 042823 24 HYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMR------LAENDMIRREIQIRLYLSGQPNVVEFKSTYEDET 97 (477)
Q Consensus 24 ~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~------~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~ 97 (477)
+|.+.+.||+|++|.||+|.+..+++.+|+|.+....... ......+.+|+.++..+ +||||+++++++....
T Consensus 1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~ 79 (267)
T cd06628 1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKEL-QHENIVQYLGSSLDAD 79 (267)
T ss_pred CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhc-CCCCeeeEEEEEEeCC
Confidence 5889999999999999999998899999999886543221 12235678899999999 7999999999999999
Q ss_pred eEEEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCcccc
Q 042823 98 AVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLF 177 (477)
Q Consensus 98 ~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~ 177 (477)
..++||||+++++|.+++...+.+++..+..++.|++.||.|||++|++||||+|+||++ ++++.+||+|||.+...
T Consensus 80 ~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lH~~~ivH~di~p~nil~---~~~~~~~l~dfg~~~~~ 156 (267)
T cd06628 80 HLNIFLEYVPGGSVAALLNNYGAFEETLVRNFVRQILKGLNYLHNRGIIHRDIKGANILV---DNKGGIKISDFGISKKL 156 (267)
T ss_pred ccEEEEEecCCCCHHHHHHhccCccHHHHHHHHHHHHHHHHHHHhcCcccccCCHHHEEE---cCCCCEEecccCCCccc
Confidence 999999999999999999888889999999999999999999999999999999999999 77888999999988765
Q ss_pred CCCc-------ceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCC
Q 042823 178 EEGQ-------VYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPW 249 (477)
Q Consensus 178 ~~~~-------~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~ 249 (477)
.... ......|++.|+|||.+.+ .++.++|+||+||++|+|++|..||...........+..... ....
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~---~~~~ 233 (267)
T cd06628 157 EANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQAIFKIGENAS---PEIP 233 (267)
T ss_pred ccccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccHHHHHHHHhccCC---CcCC
Confidence 4211 1123457889999999864 578899999999999999999999987665544444443221 1122
Q ss_pred CCCCHHHHHHHHHhcccCccccCCHHHHhcCccc
Q 042823 250 PSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWL 283 (477)
Q Consensus 250 ~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~ 283 (477)
..++..+.++|++||+.+|.+||++.++++||||
T Consensus 234 ~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~ 267 (267)
T cd06628 234 SNISSEAIDFLEKTFEIDHNKRPTAAELLKHPFL 267 (267)
T ss_pred cccCHHHHHHHHHHccCCchhCcCHHHHhhCCCC
Confidence 4578999999999999999999999999999997
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate |
| >cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-43 Score=334.71 Aligned_cols=252 Identities=23% Similarity=0.390 Sum_probs=208.5
Q ss_pred ccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 042823 23 LHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVV 102 (477)
Q Consensus 23 ~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~lv 102 (477)
++|++.++||+|+||.||+|.+..+++.||+|++.... .......+.+|+.++.++ +||||+++++++...+..++|
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv 77 (279)
T cd06619 1 QDIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDI--TVELQKQIMSELEILYKC-DSPYIIGFYGAFFVENRISIC 77 (279)
T ss_pred CcchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCC--ChHHHHHHHHHHHHHHhC-CCCCeeeEEEEEEECCEEEEE
Confidence 46889999999999999999999999999999986542 223445688899999998 799999999999999999999
Q ss_pred EeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCCCcc
Q 042823 103 MELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQV 182 (477)
Q Consensus 103 ~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~ 182 (477)
|||+++++|..+ ..+++..+..++.|++.||.|||+.||+|+||||+||++ +.++.+||+|||++...... .
T Consensus 78 ~e~~~~~~l~~~----~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nill---~~~~~~~l~dfg~~~~~~~~-~ 149 (279)
T cd06619 78 TEFMDGGSLDVY----RKIPEHVLGRIAVAVVKGLTYLWSLKILHRDVKPSNMLV---NTRGQVKLCDFGVSTQLVNS-I 149 (279)
T ss_pred EecCCCCChHHh----hcCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCCHHHEEE---CCCCCEEEeeCCcceecccc-c
Confidence 999999998544 357899999999999999999999999999999999999 77889999999998765432 2
Q ss_pred eecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChh-------hHHHHHHcCCccCCCCCCCCCCH
Q 042823 183 YRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKK-------GTYDAILQGEIDFDTDPWPSISS 254 (477)
Q Consensus 183 ~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~-------~~~~~i~~~~~~~~~~~~~~~~~ 254 (477)
.....||+.|+|||++.+ .++.++|+|||||++|+|++|..||...... .....+..... +..+....++
T Consensus 150 ~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 227 (279)
T cd06619 150 AKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDEDP--PVLPVGQFSE 227 (279)
T ss_pred ccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHhccCC--CCCCCCcCCH
Confidence 234578999999999864 5889999999999999999999999653221 11122221111 1112245788
Q ss_pred HHHHHHHHhcccCccccCCHHHHhcCcccCcCC
Q 042823 255 TAKDLVRRMLTKDPKRRITAAQVLEHPWLRESG 287 (477)
Q Consensus 255 ~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~~ 287 (477)
++++++.+||+.+|++||++.++++||||+...
T Consensus 228 ~~~~li~~~l~~~P~~Rp~~~eil~~~~~~~~~ 260 (279)
T cd06619 228 KFVHFITQCMRKQPKERPAPENLMDHPFIVQYN 260 (279)
T ss_pred HHHHHHHHHhhCChhhCCCHHHHhcCccccccc
Confidence 999999999999999999999999999998764
|
Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p |
| >cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.6e-44 Score=345.40 Aligned_cols=255 Identities=21% Similarity=0.319 Sum_probs=204.6
Q ss_pred cccccccc--CCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEe
Q 042823 27 FGRMLGRG--QFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVVME 104 (477)
Q Consensus 27 ~~~~iG~G--~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~lv~e 104 (477)
+++.||+| +||+||++.++.+|+.||+|++..... .......+.+|+.+++.+ +||||+++++++..++..|+|||
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~e~~~l~~l-~hpniv~~~~~~~~~~~~~lv~e 79 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEAC-TNEMVTFLQGELHVSKLF-NHPNIVPYRATFIADNELWVVTS 79 (327)
T ss_pred hhhhccccccceEEEEEEeecccCcEEEEEEechhhc-cHHHHHHHHHHHHHHHhc-CCCCeeeEEEEEEECCEEEEEEe
Confidence 57889999 789999999999999999999865432 223455678899998888 79999999999999999999999
Q ss_pred ccCCCchHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCCC-c
Q 042823 105 LCEGGDLFDRIIAK--GYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEG-Q 181 (477)
Q Consensus 105 ~~~gg~L~~~l~~~--~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~-~ 181 (477)
|+++|+|.+++... ..+++..+..++.|++.||.|||++||+||||||+||++ +.++.++++|||.+...... .
T Consensus 80 ~~~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiH~dlkp~Nil~---~~~~~~~l~~~~~~~~~~~~~~ 156 (327)
T cd08227 80 FMAYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMGYVHRSVKASHILI---SVDGKVYLSGLRSNLSMINHGQ 156 (327)
T ss_pred ccCCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCChhhEEE---ecCCcEEEcccchhhccccccc
Confidence 99999999998753 458999999999999999999999999999999999999 66778999999865432111 0
Q ss_pred -------ceecccccccccchhhhhh---hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCC------
Q 042823 182 -------VYRDIVGSGFYIAPEVLRR---RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFD------ 245 (477)
Q Consensus 182 -------~~~~~~gt~~y~aPE~~~~---~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~------ 245 (477)
......++..|+|||++.+ .++.++||||+||++|+|++|..||..............+..+..
T Consensus 157 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (327)
T cd08227 157 RLRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTTTI 236 (327)
T ss_pred cccccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHHHHHHhcCCccccccccch
Confidence 0112356778999999864 488999999999999999999999976554443333332211100
Q ss_pred ------------------------------------CCCCCCCCHHHHHHHHHhcccCccccCCHHHHhcCcccCcC
Q 042823 246 ------------------------------------TDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRES 286 (477)
Q Consensus 246 ------------------------------------~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~ 286 (477)
.+....+++.+.+||.+||+.||++|||++++++||||++.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~~p~f~~~ 313 (327)
T cd08227 237 PAEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQI 313 (327)
T ss_pred hhhhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhcChhhhhc
Confidence 00011357789999999999999999999999999999764
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype |
| >cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-43 Score=330.83 Aligned_cols=252 Identities=25% Similarity=0.504 Sum_probs=213.3
Q ss_pred cccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEe-CCeEEEE
Q 042823 24 HYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYED-ETAVHVV 102 (477)
Q Consensus 24 ~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~-~~~~~lv 102 (477)
.|++.+.||+|++|.||+|.++.+++.||+|.+..... .......+.+|+.+++++ +|||++++++.+.. ...+|+|
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~~lv 78 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNA-SRRERKAAEQEAQLLSQL-KHPNIVAYRESWEGEDGLLYIV 78 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhc-CHHHHHHHHHHHHHHHhC-CCCCeeeeeeeecCCCCEEEEE
Confidence 48999999999999999999999999999999865432 223455678899999999 79999999998864 4568999
Q ss_pred EeccCCCchHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCCC
Q 042823 103 MELCEGGDLFDRIIAK--GYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEG 180 (477)
Q Consensus 103 ~e~~~gg~L~~~l~~~--~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~ 180 (477)
|||+++++|.+++... ..+++.++..++.|++.||.+||++|++||||||+||++ +..+.++|+|||++......
T Consensus 79 ~e~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~~i~H~di~p~nil~---~~~~~~~l~df~~~~~~~~~ 155 (257)
T cd08223 79 MGFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEKHILHRDLKTQNVFL---TRTNIIKVGDLGIARVLENQ 155 (257)
T ss_pred ecccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCchhEEE---ecCCcEEEecccceEEeccc
Confidence 9999999999998763 458999999999999999999999999999999999999 67788999999998765332
Q ss_pred -cceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCCCCHHHHH
Q 042823 181 -QVYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKD 258 (477)
Q Consensus 181 -~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 258 (477)
.......|++.|+|||++.+ .++.++||||+||++|+|++|..||...+.......+..+.... ..+.+++.+.+
T Consensus 156 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~ 232 (257)
T cd08223 156 CDMASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDMNSLVYRIIEGKLPP---MPKDYSPELGE 232 (257)
T ss_pred CCccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCCC---CccccCHHHHH
Confidence 22234568999999999865 57889999999999999999999998777666666665554321 22467899999
Q ss_pred HHHHhcccCccccCCHHHHhcCccc
Q 042823 259 LVRRMLTKDPKRRITAAQVLEHPWL 283 (477)
Q Consensus 259 li~~~l~~dp~~R~s~~~~l~h~~~ 283 (477)
++.+||+.+|++|||+.++++||||
T Consensus 233 li~~~l~~~p~~Rp~~~~~l~~~~~ 257 (257)
T cd08223 233 LIATMLSKRPEKRPSVKSILRQPYI 257 (257)
T ss_pred HHHHHhccCcccCCCHHHHhcCCCC
Confidence 9999999999999999999999997
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. |
| >cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-43 Score=332.64 Aligned_cols=250 Identities=32% Similarity=0.574 Sum_probs=214.4
Q ss_pred ccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEeccCCCc
Q 042823 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVVMELCEGGD 110 (477)
Q Consensus 31 iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~lv~e~~~gg~ 110 (477)
||.|++|.||+|.+..+++.+|+|++.+...........+.+|+.++..+ +||||+++++.+.++..+|+||||++|++
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 79 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEEC-NHPFIVKLYRTFKDKKYIYMLMEYCLGGE 79 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhC-CCCCEeeeeeeEEcCCccEEEEecCCCCc
Confidence 79999999999999999999999999765544344557788999999999 79999999999999999999999999999
Q ss_pred hHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCCCcceecccccc
Q 042823 111 LFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSG 190 (477)
Q Consensus 111 L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~ 190 (477)
|.+++.+...+++..+..++.|++.||.|||++|++|+||+|+||++ +.++.++|+|||.+.............|++
T Consensus 80 L~~~l~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~h~dl~~~nilv---~~~~~~~l~df~~~~~~~~~~~~~~~~~~~ 156 (262)
T cd05572 80 LWTILRDRGLFDEYTARFYIACVVLAFEYLHNRGIIYRDLKPENLLL---DSNGYVKLVDFGFAKKLKSGQKTWTFCGTP 156 (262)
T ss_pred HHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEE---cCCCCEEEeeCCcccccCcccccccccCCc
Confidence 99999988889999999999999999999999999999999999999 677889999999988765443334457899
Q ss_pred cccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCC--hhhHHHHHHcCCccCCCCCCCCCCHHHHHHHHHhcccC
Q 042823 191 FYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAET--KKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKD 267 (477)
Q Consensus 191 ~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~--~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~d 267 (477)
.|+|||.+.+ .++.++|+||+|+++|+|++|..||.... .......+..+......+ +..++.+.++|.+||+.+
T Consensus 157 ~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~i~~~l~~~ 234 (262)
T cd05572 157 EYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDPMEIYNDILKGNGKLEFP--NYIDKAAKDLIKQLLRRN 234 (262)
T ss_pred CccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCHHHHHHHHhccCCCCCCC--cccCHHHHHHHHHHccCC
Confidence 9999999864 57899999999999999999999998766 445555555322222211 245889999999999999
Q ss_pred ccccCC-----HHHHhcCcccCcC
Q 042823 268 PKRRIT-----AAQVLEHPWLRES 286 (477)
Q Consensus 268 p~~R~s-----~~~~l~h~~~~~~ 286 (477)
|++||+ +.++++||||+..
T Consensus 235 p~~R~~~~~~~~~~l~~~~~~~~~ 258 (262)
T cd05572 235 PEERLGNLKGGIKDIKKHKWFNGF 258 (262)
T ss_pred hhhCcCCcccCHHHHhcChhhhCC
Confidence 999999 9999999999853
|
Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi |
| >cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-43 Score=330.06 Aligned_cols=252 Identities=26% Similarity=0.425 Sum_probs=217.2
Q ss_pred cccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEE
Q 042823 24 HYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVVM 103 (477)
Q Consensus 24 ~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~lv~ 103 (477)
.|.+.+.||+|++|.||+|.++.+++.|++|.+..... .......+.+|+.+++.+ +||||+++++++...+..|+||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~ 78 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKM-NRREREEAIDEARVLAKL-DSSYIIRYYESFLDKGKLNIVM 78 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhC-CHHHHHHHHHHHHHHHhc-CCCCeehheeeeccCCEEEEEE
Confidence 47888999999999999999999999999999865432 234566788999999999 7999999999999999999999
Q ss_pred eccCCCchHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCCCc
Q 042823 104 ELCEGGDLFDRIIAK--GYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQ 181 (477)
Q Consensus 104 e~~~gg~L~~~l~~~--~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~ 181 (477)
||++|++|.+++... ..+++..+..++.|++.||.|||+.|++||||||+||++ +..+.++|+|||++.......
T Consensus 79 e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~h~dl~~~nili---~~~~~~~l~df~~~~~~~~~~ 155 (256)
T cd08529 79 EYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSKKILHRDIKSLNLFL---DAYDNVKIGDLGVAKLLSDNT 155 (256)
T ss_pred EeCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEE---eCCCCEEEcccccceeccCcc
Confidence 999999999999774 568999999999999999999999999999999999999 667889999999987664432
Q ss_pred c-eecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCCCCHHHHHH
Q 042823 182 V-YRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDL 259 (477)
Q Consensus 182 ~-~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l 259 (477)
. .....|++.|+|||++.+ .++.++|+|||||++|+|++|..||...+.......+..+...... ..++..+.++
T Consensus 156 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~ 232 (256)
T cd08529 156 NFANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQGALILKIIRGVFPPVS---QMYSQQLAQL 232 (256)
T ss_pred chhhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCc---cccCHHHHHH
Confidence 2 234568899999999864 5789999999999999999999999887766666666665432211 2578999999
Q ss_pred HHHhcccCccccCCHHHHhcCccc
Q 042823 260 VRRMLTKDPKRRITAAQVLEHPWL 283 (477)
Q Consensus 260 i~~~l~~dp~~R~s~~~~l~h~~~ 283 (477)
+.+||+.+|++||++.++++|||+
T Consensus 233 i~~~l~~~p~~Rp~~~~ll~~~~~ 256 (256)
T cd08529 233 IDQCLTKDYRQRPDTFQLLRNPSL 256 (256)
T ss_pred HHHHccCCcccCcCHHHHhhCCCC
Confidence 999999999999999999999996
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc |
| >PHA03390 pk1 serine/threonine-protein kinase 1; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-43 Score=334.39 Aligned_cols=250 Identities=24% Similarity=0.407 Sum_probs=203.0
Q ss_pred ccccccccccc--cccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCe
Q 042823 21 VMLHYFFGRML--GRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETA 98 (477)
Q Consensus 21 ~~~~Y~~~~~i--G~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~ 98 (477)
+.+.|.+.+.+ |+|+||.||++.++.++..+|+|++....... .|+.....+.+||||+++++.+..++.
T Consensus 12 ~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~--------~e~~~~~~~~~h~~iv~~~~~~~~~~~ 83 (267)
T PHA03390 12 FLKNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNA--------IEPMVHQLMKDNPNFIKLYYSVTTLKG 83 (267)
T ss_pred HHHhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcch--------hhHHHHHHhhcCCCEEEEEEEEecCCe
Confidence 34567777776 99999999999999999999999986542211 122222223479999999999999999
Q ss_pred EEEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCC-CEEEeecCCcccc
Q 042823 99 VHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNA-LLKVTDFGSALLF 177 (477)
Q Consensus 99 ~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~-~~kl~Dfg~a~~~ 177 (477)
+|+||||++||+|.+++.....+++.++..++.|++.||.|||+.|++||||||+||++ +..+ .++|+|||.+...
T Consensus 84 ~~iv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~---~~~~~~~~l~dfg~~~~~ 160 (267)
T PHA03390 84 HVLIMDYIKDGDLFDLLKKEGKLSEAEVKKIIRQLVEALNDLHKHNIIHNDIKLENVLY---DRAKDRIYLCDYGLCKII 160 (267)
T ss_pred eEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEE---eCCCCeEEEecCccceec
Confidence 99999999999999999888889999999999999999999999999999999999998 4455 8999999988765
Q ss_pred CCCcceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHH-HHHHcCCccCCCCCCCCCCHH
Q 042823 178 EEGQVYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTY-DAILQGEIDFDTDPWPSISST 255 (477)
Q Consensus 178 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~-~~i~~~~~~~~~~~~~~~~~~ 255 (477)
... ....|++.|+|||++.+ .++.++||||+|+++|+|++|..||......... ..+.... ......++.+|+.
T Consensus 161 ~~~---~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 236 (267)
T PHA03390 161 GTP---SCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLKRQ-QKKLPFIKNVSKN 236 (267)
T ss_pred CCC---ccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHHHHhh-cccCCcccccCHH
Confidence 432 23468899999999864 6889999999999999999999999765443321 1121111 2222334568999
Q ss_pred HHHHHHHhcccCccccCC-HHHHhcCcccCc
Q 042823 256 AKDLVRRMLTKDPKRRIT-AAQVLEHPWLRE 285 (477)
Q Consensus 256 ~~~li~~~l~~dp~~R~s-~~~~l~h~~~~~ 285 (477)
+.+||.+||+.+|.+||+ ++++|+||||++
T Consensus 237 ~~~li~~~l~~~p~~R~~~~~~~l~h~~~~~ 267 (267)
T PHA03390 237 ANDFVQSMLKYNINYRLTNYNEIIKHPFLKI 267 (267)
T ss_pred HHHHHHHHhccChhhCCchHHHHhcCCcccC
Confidence 999999999999999996 599999999964
|
|
| >cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-43 Score=339.28 Aligned_cols=264 Identities=28% Similarity=0.453 Sum_probs=218.4
Q ss_pred ccccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeC
Q 042823 17 AYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDE 96 (477)
Q Consensus 17 ~~~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~ 96 (477)
...+...+|++++.||+|+||.||+|.+..+++.||+|.+..... .....+.+|+.+++.+ +||||+++++++...
T Consensus 13 ~~~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~ 88 (297)
T cd06656 13 SVGDPKKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQ---PKKELIINEILVMREN-KNPNIVNYLDSYLVG 88 (297)
T ss_pred ccCChhhhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCcc---chHHHHHHHHHHHHhC-CCCCEeeEEEEEecC
Confidence 345667899999999999999999999999999999999865432 2345678899998888 799999999999999
Q ss_pred CeEEEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccc
Q 042823 97 TAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALL 176 (477)
Q Consensus 97 ~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~ 176 (477)
...|+||||++|++|.+++.+ ..+++.++..++.|++.||.|||+.|++||||||+||++ +.++.++|+|||.+..
T Consensus 89 ~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~l~~~L~~LH~~~i~H~dL~p~Nili---~~~~~~~l~Dfg~~~~ 164 (297)
T cd06656 89 DELWVVMEYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALDFLHSNQVIHRDIKSDNILL---GMDGSVKLTDFGFCAQ 164 (297)
T ss_pred CEEEEeecccCCCCHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEE---CCCCCEEECcCccceE
Confidence 999999999999999998865 457899999999999999999999999999999999999 6778999999998876
Q ss_pred cCCCcc-eecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCCCCH
Q 042823 177 FEEGQV-YRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISS 254 (477)
Q Consensus 177 ~~~~~~-~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 254 (477)
...... .....+++.|+|||.+.+ .++.++|+||+||++|+|++|.+||...........+...... .......++.
T Consensus 165 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 243 (297)
T cd06656 165 ITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTP-ELQNPERLSA 243 (297)
T ss_pred ccCCccCcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchheeeeccCCCC-CCCCccccCH
Confidence 543322 234578899999999865 5789999999999999999999999776543332222221111 1112235788
Q ss_pred HHHHHHHHhcccCccccCCHHHHhcCcccCcCCCC
Q 042823 255 TAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEA 289 (477)
Q Consensus 255 ~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~~~~ 289 (477)
.+++++.+||..+|++||++.++++||||+.....
T Consensus 244 ~~~~li~~~l~~~p~~Rps~~~il~~~~~~~~~~~ 278 (297)
T cd06656 244 VFRDFLNRCLEMDVDRRGSAKELLQHPFLKLAKPL 278 (297)
T ss_pred HHHHHHHHHccCChhhCcCHHHHhcCchhcccccc
Confidence 99999999999999999999999999999876544
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-44 Score=342.01 Aligned_cols=254 Identities=27% Similarity=0.446 Sum_probs=206.0
Q ss_pred cccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEE
Q 042823 24 HYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVVM 103 (477)
Q Consensus 24 ~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~lv~ 103 (477)
+|++.+.||+|+||.||+|.++.+|+.||+|.+...... ......+.+|+.+++.+ +||||+++++++.+...+|+|+
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~-~~~~~~~~~ei~~l~~l-~h~~i~~~~~~~~~~~~~~lv~ 78 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDD-EGVPSSALREICLLKEL-KHKNIVRLYDVLHSDKKLTLVF 78 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCcEEEEEEeeccccc-ccCccchhHHHHHHHhc-CCCCeeeHHHHhccCCceEEEE
Confidence 589999999999999999999999999999998654321 12234567899999999 7999999999999999999999
Q ss_pred eccCCCchHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCCCc-
Q 042823 104 ELCEGGDLFDRIIA-KGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQ- 181 (477)
Q Consensus 104 e~~~gg~L~~~l~~-~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~- 181 (477)
||+++ +|.+++.. .+.+++..++.++.||+.||.|||++|++||||||+||++ +.++.+||+|||++.......
T Consensus 79 e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dl~~~nil~---~~~~~~~l~dfg~~~~~~~~~~ 154 (284)
T cd07839 79 EYCDQ-DLKKYFDSCNGDIDPEIVKSFMFQLLKGLAFCHSHNVLHRDLKPQNLLI---NKNGELKLADFGLARAFGIPVR 154 (284)
T ss_pred ecCCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEE---cCCCcEEECccchhhccCCCCC
Confidence 99975 88888765 5678999999999999999999999999999999999999 677889999999987654322
Q ss_pred ceecccccccccchhhhhh--hcCCccchHhHHHHHHHHhhCCCCCCC-CChhhHHHHHHcCCc--------------c-
Q 042823 182 VYRDIVGSGFYIAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPFWA-ETKKGTYDAILQGEI--------------D- 243 (477)
Q Consensus 182 ~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~l~tg~~pf~~-~~~~~~~~~i~~~~~--------------~- 243 (477)
......+++.|+|||++.+ .++.++|||||||++|+|+||..||.. .+....+..+.+... .
T Consensus 155 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (284)
T cd07839 155 CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSKLPDY 234 (284)
T ss_pred CcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCChHHhHHhhhcccc
Confidence 2234567899999999865 368899999999999999999888643 333333333221100 0
Q ss_pred --CC--------CCCCCCCCHHHHHHHHHhcccCccccCCHHHHhcCccc
Q 042823 244 --FD--------TDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWL 283 (477)
Q Consensus 244 --~~--------~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~ 283 (477)
++ ....+.++++++++|.+||+.||.+|||+.++++||||
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~h~~f 284 (284)
T cd07839 235 KPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQHPYF 284 (284)
T ss_pred cccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhcCCCC
Confidence 00 01124578999999999999999999999999999997
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also |
| >cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-43 Score=338.74 Aligned_cols=261 Identities=28% Similarity=0.456 Sum_probs=219.1
Q ss_pred ccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCe
Q 042823 19 EDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETA 98 (477)
Q Consensus 19 ~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~ 98 (477)
.....+|++.+.||.|++|.||+|.+..+++.||+|.+..... .....+.+|+.++..+ +||||+++++++.....
T Consensus 15 ~~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~---~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~ 90 (296)
T cd06655 15 GDPKKKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQ---PKKELIINEILVMKEL-KNPNIVNFLDSFLVGDE 90 (296)
T ss_pred CCCcceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccC---chHHHHHHHHHHHHhc-CCCceeeeeeeEecCce
Confidence 3445689999999999999999999999999999999865432 2345678899999988 79999999999999999
Q ss_pred EEEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccC
Q 042823 99 VHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFE 178 (477)
Q Consensus 99 ~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~ 178 (477)
+|+|+||++|++|.+++... .+++.++..++.|++.||.|||++|++||||||+||++ +.++.+||+|||++....
T Consensus 91 ~~lv~e~~~~~~L~~~~~~~-~l~~~~~~~i~~~l~~al~~LH~~~i~H~dL~p~Nili---~~~~~~kl~dfg~~~~~~ 166 (296)
T cd06655 91 LFVVMEYLAGGSLTDVVTET-CMDEAQIAAVCRECLQALEFLHANQVIHRDIKSDNVLL---GMDGSVKLTDFGFCAQIT 166 (296)
T ss_pred EEEEEEecCCCcHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEE---CCCCCEEEccCccchhcc
Confidence 99999999999998887654 58999999999999999999999999999999999999 677889999999887654
Q ss_pred CCcc-eecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCCCCHHH
Q 042823 179 EGQV-YRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTA 256 (477)
Q Consensus 179 ~~~~-~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 256 (477)
.... .....|++.|+|||.+.+ .++.++|||||||++|+|++|..||...........+....... ......+++.+
T Consensus 167 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 245 (296)
T cd06655 167 PEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPE-LQNPEKLSPIF 245 (296)
T ss_pred cccccCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCcc-cCCcccCCHHH
Confidence 3322 233568899999999864 58899999999999999999999998876655444444332211 11234688999
Q ss_pred HHHHHHhcccCccccCCHHHHhcCcccCcCCC
Q 042823 257 KDLVRRMLTKDPKRRITAAQVLEHPWLRESGE 288 (477)
Q Consensus 257 ~~li~~~l~~dp~~R~s~~~~l~h~~~~~~~~ 288 (477)
.++|.+||..||++|||+.++++||||+....
T Consensus 246 ~~li~~~l~~dp~~Rpt~~~il~~~~~~~~~~ 277 (296)
T cd06655 246 RDFLNRCLEMDVEKRGSAKELLQHPFLKLAKP 277 (296)
T ss_pred HHHHHHHhhcChhhCCCHHHHhhChHhhhccc
Confidence 99999999999999999999999999986543
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-43 Score=337.50 Aligned_cols=260 Identities=27% Similarity=0.348 Sum_probs=214.5
Q ss_pred ccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 042823 23 LHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVV 102 (477)
Q Consensus 23 ~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~lv 102 (477)
++|++.+.||+|+||.||+|.+..+++.||+|.+.... .......+.+|+.++.++ +||||+++++++..++.+|+|
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~~~~~~lv 77 (286)
T cd06622 1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLEL--DESKFNQIIMELDILHKA-VSPYIVDFYGAFFIEGAVYMC 77 (286)
T ss_pred ChhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeeccc--CHHHHHHHHHHHHHHHhc-CCCcHHhhhhheecCCeEEEE
Confidence 47999999999999999999999999999999886432 223346788999999998 799999999999999999999
Q ss_pred EeccCCCchHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHH-cCCeeccCCCCceeeeecCCCCCEEEeecCCccccC
Q 042823 103 MELCEGGDLFDRIIAK---GYNSERDAATVLRAIVNAVNVCHS-MGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFE 178 (477)
Q Consensus 103 ~e~~~gg~L~~~l~~~---~~~~~~~~~~i~~qil~~L~~lH~-~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~ 178 (477)
|||++|++|..++... ..+++..+..++.|++.||.|||+ .|++||||||+||++ +.++.+||+|||.+....
T Consensus 78 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~---~~~~~~~l~dfg~~~~~~ 154 (286)
T cd06622 78 MEYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHNIIHRDVKPTNVLV---NGNGQVKLCDFGVSGNLV 154 (286)
T ss_pred EeecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCCEeeCCCCHHHEEE---CCCCCEEEeecCCccccc
Confidence 9999999998888763 378999999999999999999997 599999999999999 667889999999987653
Q ss_pred CCcceecccccccccchhhhhh-------hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCC
Q 042823 179 EGQVYRDIVGSGFYIAPEVLRR-------RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPS 251 (477)
Q Consensus 179 ~~~~~~~~~gt~~y~aPE~~~~-------~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 251 (477)
.. ......|++.|+|||.+.+ .++.++|+||+||++|+|++|..||...........+.......+....+.
T Consensus 155 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (286)
T cd06622 155 AS-LAKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANIFAQLSAIVDGDPPTLPSG 233 (286)
T ss_pred CC-ccccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhhHHHHHHHHhhcCCCCCCcc
Confidence 32 2234468889999999753 257899999999999999999999976554443333222111112222345
Q ss_pred CCHHHHHHHHHhcccCccccCCHHHHhcCcccCcCCCC
Q 042823 252 ISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEA 289 (477)
Q Consensus 252 ~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~~~~ 289 (477)
+++++.+||.+||+.+|++||++.++++||||......
T Consensus 234 ~~~~~~~li~~~l~~~p~~Rp~~~~l~~~~~~~~~~~~ 271 (286)
T cd06622 234 YSDDAQDFVAKCLNKIPNRRPTYAQLLEHPWLVKYKNA 271 (286)
T ss_pred cCHHHHHHHHHHcccCcccCCCHHHHhcChhhhhccCC
Confidence 89999999999999999999999999999999876544
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-43 Score=332.01 Aligned_cols=254 Identities=28% Similarity=0.449 Sum_probs=216.2
Q ss_pred cccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEE
Q 042823 22 MLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHV 101 (477)
Q Consensus 22 ~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~l 101 (477)
.++|.+.+.||+|+||.||+|.+..+++.+|+|++..... .....+.+|+.+++++ +||||+++++++.+...+|+
T Consensus 2 ~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~---~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~l 77 (262)
T cd06613 2 QEDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPG---DDFEIIQQEISMLKEC-RHPNIVAYFGSYLRRDKLWI 77 (262)
T ss_pred ccceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCch---hhHHHHHHHHHHHHhC-CCCChhceEEEEEeCCEEEE
Confidence 4689999999999999999999999999999999875432 2456788999999999 79999999999999999999
Q ss_pred EEeccCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCCC
Q 042823 102 VMELCEGGDLFDRIIAK-GYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEG 180 (477)
Q Consensus 102 v~e~~~gg~L~~~l~~~-~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~ 180 (477)
+|||++|++|.+++... ..+++.++..++.|++.||.|||++|++||||+|+||++ +..+.+||+|||.+......
T Consensus 78 ~~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i---~~~~~~~l~d~g~~~~~~~~ 154 (262)
T cd06613 78 VMEYCGGGSLQDIYQVTRGPLSELQIAYVCRETLKGLAYLHETGKIHRDIKGANILL---TEDGDVKLADFGVSAQLTAT 154 (262)
T ss_pred EEeCCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCceecCCChhhEEE---CCCCCEEECccccchhhhhh
Confidence 99999999999998776 789999999999999999999999999999999999999 67788999999998765432
Q ss_pred c-ceecccccccccchhhhhh----hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCC-CCCCCCCH
Q 042823 181 Q-VYRDIVGSGFYIAPEVLRR----RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDT-DPWPSISS 254 (477)
Q Consensus 181 ~-~~~~~~gt~~y~aPE~~~~----~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~-~~~~~~~~ 254 (477)
. ......++..|+|||.+.+ .++.++|+||+||++|+|++|.+||...........+......... ...+.++.
T Consensus 155 ~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (262)
T cd06613 155 IAKRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRALFLISKSNFPPPKLKDKEKWSP 234 (262)
T ss_pred hhccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCccccchhhhhH
Confidence 2 2234578889999999853 5788999999999999999999999887665555544444222111 11234678
Q ss_pred HHHHHHHHhcccCccccCCHHHHhcCcc
Q 042823 255 TAKDLVRRMLTKDPKRRITAAQVLEHPW 282 (477)
Q Consensus 255 ~~~~li~~~l~~dp~~R~s~~~~l~h~~ 282 (477)
++.+++.+||..+|..|||+.+++.|+|
T Consensus 235 ~~~~li~~~l~~~p~~Rpt~~~il~~~~ 262 (262)
T cd06613 235 VFHDFIKKCLTKDPKKRPTATKLLQHPF 262 (262)
T ss_pred HHHHHHHHHcCCChhhCCCHHHHhcCCC
Confidence 8999999999999999999999999998
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ |
| >cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-43 Score=334.96 Aligned_cols=252 Identities=27% Similarity=0.444 Sum_probs=202.1
Q ss_pred cccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhc--cCCCCeeEEEEEEEeCCeEEEEEeccC
Q 042823 30 MLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYL--SGQPNVVEFKSTYEDETAVHVVMELCE 107 (477)
Q Consensus 30 ~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l--~~hpniv~~~~~~~~~~~~~lv~e~~~ 107 (477)
.||+|+||.||+|.+..+++.+|+|.+.+.............+|..++..+ .+||||+.+++++...+..|+||||++
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 80 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN 80 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence 489999999999999999999999998764332222222333444333322 369999999999999999999999999
Q ss_pred CCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCCCcceeccc
Q 042823 108 GGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIV 187 (477)
Q Consensus 108 gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~ 187 (477)
||+|.+++...+.+++..+..++.|++.||.|||++|++||||||+||++ +.++.++|+|||++....... .....
T Consensus 81 ~~~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dikp~Nil~---~~~~~~~l~dfg~~~~~~~~~-~~~~~ 156 (279)
T cd05633 81 GGDLHYHLSQHGVFSEKEMRFYATEIILGLEHMHNRFVVYRDLKPANILL---DEHGHVRISDLGLACDFSKKK-PHASV 156 (279)
T ss_pred CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcCCCCCCHHHEEE---CCCCCEEEccCCcceeccccC-ccCcC
Confidence 99999999888889999999999999999999999999999999999999 777899999999987554322 23357
Q ss_pred ccccccchhhhhh--hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCCCCHHHHHHHHHhcc
Q 042823 188 GSGFYIAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLT 265 (477)
Q Consensus 188 gt~~y~aPE~~~~--~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~ 265 (477)
||+.|+|||.+.. .++.++||||+||++|+|++|..||........ ..+............+.++++++++|.+||.
T Consensus 157 ~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~ 235 (279)
T cd05633 157 GTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK-HEIDRMTLTVNVELPDSFSPELKSLLEGLLQ 235 (279)
T ss_pred CCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCH-HHHHHHhhcCCcCCccccCHHHHHHHHHHhc
Confidence 8999999999853 478999999999999999999999976433221 1122111222222335689999999999999
Q ss_pred cCccccC-----CHHHHhcCcccCcC
Q 042823 266 KDPKRRI-----TAAQVLEHPWLRES 286 (477)
Q Consensus 266 ~dp~~R~-----s~~~~l~h~~~~~~ 286 (477)
.||.+|| |++++++||||+..
T Consensus 236 ~~p~~R~~~~~~~~~~~~~h~~~~~~ 261 (279)
T cd05633 236 RDVSKRLGCLGRGAQEVKEHVFFKGI 261 (279)
T ss_pred CCHHHhcCCCCCCHHHHHhCccccCC
Confidence 9999999 69999999999864
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi |
| >KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-44 Score=314.53 Aligned_cols=261 Identities=26% Similarity=0.349 Sum_probs=222.7
Q ss_pred ccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 042823 23 LHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVV 102 (477)
Q Consensus 23 ~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~lv 102 (477)
.+..++..||.|+.|+|++++++.+|...|||.+.+.. +..+..++.+.+.+.....+.|.||+.+++|..+..++|.
T Consensus 92 ndl~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~--Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~Ic 169 (391)
T KOG0983|consen 92 NDLENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTG--NKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFIC 169 (391)
T ss_pred HHhhhHHhhcCCCccceEEEEEcccceEEEEEeecccC--CHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHH
Confidence 34556788999999999999999999999999997653 4566788888999888776799999999999999999999
Q ss_pred EeccCCCchHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHH-cCCeeccCCCCceeeeecCCCCCEEEeecCCccccCCC
Q 042823 103 MELCEGGDLFDRIIA-KGYNSERDAATVLRAIVNAVNVCHS-MGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEG 180 (477)
Q Consensus 103 ~e~~~gg~L~~~l~~-~~~~~~~~~~~i~~qil~~L~~lH~-~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~ 180 (477)
||.+.. -+..+++. .++++|..+-.+...+++||.||.. +||+|||+||+|||+ ++.|.+||||||++..+.+.
T Consensus 170 MelMs~-C~ekLlkrik~piPE~ilGk~tva~v~AL~YLKeKH~viHRDvKPSNILl---De~GniKlCDFGIsGrlvdS 245 (391)
T KOG0983|consen 170 MELMST-CAEKLLKRIKGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILL---DERGNIKLCDFGISGRLVDS 245 (391)
T ss_pred HHHHHH-HHHHHHHHhcCCchHHhhhhhHHHHHHHHHHHHHhcceeecccCccceEE---ccCCCEEeecccccceeecc
Confidence 999854 34444443 4679999999999999999999985 589999999999999 89999999999999888777
Q ss_pred cceecccccccccchhhhh----hhcCCccchHhHHHHHHHHhhCCCCCCCC-ChhhHHHHHHcCCccCCCCCCCCCCHH
Q 042823 181 QVYRDIVGSGFYIAPEVLR----RRYGKEIDIWSAGVILYILLSGVPPFWAE-TKKGTYDAILQGEIDFDTDPWPSISST 255 (477)
Q Consensus 181 ~~~~~~~gt~~y~aPE~~~----~~~~~~~DiwslG~il~~l~tg~~pf~~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~ 255 (477)
.......|.+.|||||.+. ..|+-++||||||+.++||.||+.||.+. .+-+++..+++.+.+..+.. ...|+.
T Consensus 246 kAhtrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe~ltkvln~ePP~L~~~-~gFSp~ 324 (391)
T KOG0983|consen 246 KAHTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFEVLTKVLNEEPPLLPGH-MGFSPD 324 (391)
T ss_pred cccccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccHHHHHHHHhcCCCCCCcc-cCcCHH
Confidence 7667778999999999985 35899999999999999999999999874 45577777877655332222 248999
Q ss_pred HHHHHHHhcccCccccCCHHHHhcCcccCcCCCCC
Q 042823 256 AKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEAS 290 (477)
Q Consensus 256 ~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~~~~~ 290 (477)
+.+|+..||++|+.+||...++|+|||++.....+
T Consensus 325 F~~fv~~CL~kd~r~RP~Y~~Ll~h~Fi~~ye~a~ 359 (391)
T KOG0983|consen 325 FQSFVKDCLTKDHRKRPKYNKLLEHPFIKRYETAE 359 (391)
T ss_pred HHHHHHHHhhcCcccCcchHHHhcCcceeecchhh
Confidence 99999999999999999999999999999876554
|
|
| >KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-44 Score=296.01 Aligned_cols=258 Identities=28% Similarity=0.457 Sum_probs=219.1
Q ss_pred ccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 042823 23 LHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVV 102 (477)
Q Consensus 23 ~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~lv 102 (477)
+.|.-.++||+|.||+||+|+++.++..||+|.+........- .....+|+-+++.| .|.|||+++++..+++.+-+|
T Consensus 2 ~~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegv-pssalreicllkel-khknivrl~dvlhsdkkltlv 79 (292)
T KOG0662|consen 2 QKYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGV-PSSALREICLLKEL-KHKNIVRLHDVLHSDKKLTLV 79 (292)
T ss_pred cchHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCC-cHHHHHHHHHHHHh-hhcceeehhhhhccCceeEEe
Confidence 5688889999999999999999999999999999765443322 23456899999999 699999999999999999999
Q ss_pred EeccCCCchHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCCCc
Q 042823 103 MELCEGGDLFDRIIA-KGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQ 181 (477)
Q Consensus 103 ~e~~~gg~L~~~l~~-~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~ 181 (477)
+|||.. +|..+... ++.+....+++++.|++.||.|||++++.||||||+|.++ +.++.+||+|||+++.+.-+-
T Consensus 80 fe~cdq-dlkkyfdslng~~d~~~~rsfmlqllrgl~fchshnvlhrdlkpqnlli---n~ngelkladfglarafgipv 155 (292)
T KOG0662|consen 80 FEFCDQ-DLKKYFDSLNGDLDPEIVRSFMLQLLRGLGFCHSHNVLHRDLKPQNLLI---NRNGELKLADFGLARAFGIPV 155 (292)
T ss_pred HHHhhH-HHHHHHHhcCCcCCHHHHHHHHHHHHhhhhhhhhhhhhhccCCcceEEe---ccCCcEEecccchhhhcCCce
Confidence 999965 89888876 6789999999999999999999999999999999999998 889999999999998876543
Q ss_pred c-eecccccccccchhhhhh--hcCCccchHhHHHHHHHHhh-CCCCCCCCChhhHHHHHHcCCccCCCCCCC-------
Q 042823 182 V-YRDIVGSGFYIAPEVLRR--RYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQGEIDFDTDPWP------- 250 (477)
Q Consensus 182 ~-~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~l~t-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~------- 250 (477)
. +...+-|.+|.+|.++-+ -|+...|+||.|||+.|+.. |.+.|.+..-.+++..|...-.....+.||
T Consensus 156 rcysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvddqlkrif~~lg~p~ed~wps~t~lpd 235 (292)
T KOG0662|consen 156 RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEDQWPSMTKLPD 235 (292)
T ss_pred EeeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHHHHhCCCccccCCccccCCC
Confidence 2 344577999999999876 39999999999999999986 788888888888887776543333333333
Q ss_pred ------------------CCCHHHHHHHHHhcccCccccCCHHHHhcCcccCcC
Q 042823 251 ------------------SISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRES 286 (477)
Q Consensus 251 ------------------~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~ 286 (477)
.++..-+++++++|..+|.+|++++.+|+||||...
T Consensus 236 yk~yp~ypattswsqivp~lns~grdllqkll~cnp~qrisaeaalqhpyf~d~ 289 (292)
T KOG0662|consen 236 YKPYPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQHPYFSDF 289 (292)
T ss_pred CcccCCccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhcCcccccc
Confidence 234567899999999999999999999999999764
|
|
| >cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-43 Score=331.96 Aligned_cols=254 Identities=26% Similarity=0.421 Sum_probs=211.7
Q ss_pred cccccccccccCCeEEEEEEEccCCceEEEEEeecCCcc---chhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEE
Q 042823 24 HYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKM---RLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVH 100 (477)
Q Consensus 24 ~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~---~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~ 100 (477)
+|++.+.||+|+||.||+|.+ .+++.+|+|.+...... .......+.+|+.++..+ +||||+++++++.+...+|
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~ 78 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLT-NQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSL-KHVNIVQYLGTCLDDNTIS 78 (265)
T ss_pred CccccceEeccCCeEEEEEEE-cCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhc-CCCCEeeEeeEeecCCeEE
Confidence 588999999999999999986 47889999988654321 122345688899999999 7999999999999999999
Q ss_pred EEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCC-
Q 042823 101 VVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEE- 179 (477)
Q Consensus 101 lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~- 179 (477)
+|+||++|++|.+++.+.+.+++..+..++.|++.||.|||+.+++|+||+|+||++ +..+.++|+|||++.....
T Consensus 79 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~---~~~~~~~l~dfg~~~~~~~~ 155 (265)
T cd06631 79 IFMEFVPGGSISSILNRFGPLPEPVFCKYTKQILDGVAYLHNNCVVHRDIKGNNVML---MPNGIIKLIDFGCARRLAWV 155 (265)
T ss_pred EEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHhEEE---CCCCeEEeccchhhHhhhhc
Confidence 999999999999999888889999999999999999999999999999999999999 6778899999998865421
Q ss_pred ------Ccceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCCC
Q 042823 180 ------GQVYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSI 252 (477)
Q Consensus 180 ------~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 252 (477)
........|++.|+|||++.+ .++.++|||||||++|+|++|..||...........+.......+ ...+.+
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 234 (265)
T cd06631 156 GLHGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLAAMFYIGAHRGLMP-RLPDSF 234 (265)
T ss_pred cccccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChHHHHHHhhhccCCCC-CCCCCC
Confidence 111234568999999999875 578999999999999999999999977654444433333222222 223468
Q ss_pred CHHHHHHHHHhcccCccccCCHHHHhcCccc
Q 042823 253 SSTAKDLVRRMLTKDPKRRITAAQVLEHPWL 283 (477)
Q Consensus 253 ~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~ 283 (477)
+..+.++|.+||..+|++||++.++++||||
T Consensus 235 ~~~~~~~i~~~l~~~p~~Rp~~~~~l~~~~~ 265 (265)
T cd06631 235 SAAAIDFVTSCLTRDQHERPSALQLLRHDFL 265 (265)
T ss_pred CHHHHHHHHHHhcCCcccCCCHHHHhcCCCC
Confidence 8999999999999999999999999999997
|
Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. |
| >PHA03209 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-44 Score=350.41 Aligned_cols=249 Identities=23% Similarity=0.337 Sum_probs=199.2
Q ss_pred ccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 042823 23 LHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVV 102 (477)
Q Consensus 23 ~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~lv 102 (477)
..|.+++.||+|+||.||+|.+..++..||+|+..+. ....|+.++..+ +||||+++++++......|+|
T Consensus 66 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~---------~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv 135 (357)
T PHA03209 66 LGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG---------TTLIEAMLLQNV-NHPSVIRMKDTLVSGAITCMV 135 (357)
T ss_pred cCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc---------ccHHHHHHHHhC-CCCCCcChhheEEeCCeeEEE
Confidence 3699999999999999999999999999999975332 124588888998 799999999999999999999
Q ss_pred EeccCCCchHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCCCc
Q 042823 103 MELCEGGDLFDRIIA-KGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQ 181 (477)
Q Consensus 103 ~e~~~gg~L~~~l~~-~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~ 181 (477)
|||+. ++|.+++.. ...+++..+..++.||+.||.|||++||+||||||+||++ +..+.+||+|||++.......
T Consensus 136 ~e~~~-~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill---~~~~~~kl~DfG~a~~~~~~~ 211 (357)
T PHA03209 136 LPHYS-SDLYTYLTKRSRPLPIDQALIIEKQILEGLRYLHAQRIIHRDVKTENIFI---NDVDQVCIGDLGAAQFPVVAP 211 (357)
T ss_pred EEccC-CcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE---CCCCCEEEecCccccccccCc
Confidence 99996 488888865 4568999999999999999999999999999999999999 777889999999987544333
Q ss_pred ceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChhh----------HHHHHHcCC----ccCCC
Q 042823 182 VYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKG----------TYDAILQGE----IDFDT 246 (477)
Q Consensus 182 ~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~----------~~~~i~~~~----~~~~~ 246 (477)
......||+.|+|||++.+ .++.++|||||||++|+|+++..|+....... .+..+.... ..++.
T Consensus 212 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~f~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 291 (357)
T PHA03209 212 AFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTIFEDPPSTPEEYVKSCHSHLLKIISTLKVHPEEFPR 291 (357)
T ss_pred ccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCccccCCCCcHHHHHHHHHHHHHHHHHHhccChhhcCC
Confidence 3445679999999999864 68999999999999999998655443321111 111111100 00100
Q ss_pred --------------------------CCCCCCCHHHHHHHHHhcccCccccCCHHHHhcCcccCc
Q 042823 247 --------------------------DPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRE 285 (477)
Q Consensus 247 --------------------------~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~ 285 (477)
.....++.++.+||.+||+.||.+|||+.|+|+||||++
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rpta~e~l~hp~f~~ 356 (357)
T PHA03209 292 DPGSRLVRGFIEYASLERQPYTRYPCFQRVNLPIDGEFLVHKMLTFDAAMRPSAEEILNYPMFAQ 356 (357)
T ss_pred CCccHHHHHHHhhcccCCCcccccHHHhccCCCchHHHHHHHHHcCCcccCcCHHHHhcCchhcc
Confidence 001245778889999999999999999999999999975
|
|
| >KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-45 Score=354.25 Aligned_cols=264 Identities=26% Similarity=0.439 Sum_probs=222.2
Q ss_pred cccccccccccc-----ccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEE
Q 042823 17 AYEDVMLHYFFG-----RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKS 91 (477)
Q Consensus 17 ~~~~~~~~Y~~~-----~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~ 91 (477)
..+.+.-.|... -+||+|.||+||.|++..|+..+|||.+..+.. ....-+..||.+.++| .|.|||++.+
T Consensus 564 ane~iefeYeyde~~ervVLGKGTYG~VYA~RD~~tqvrIaIKEIpekds---r~~QPLhEEIaLH~~L-rHkNIVrYLG 639 (1226)
T KOG4279|consen 564 ANEKIEFEYEYDESNERVVLGKGTYGTVYAARDMDTQVRIAIKEIPEKDS---REVQPLHEEIALHSTL-RHKNIVRYLG 639 (1226)
T ss_pred cccceEEEeeecCCCceEEeecCceeEEEeeccccceeEEEeeecccccc---hhhccHHHHHHHHHHH-hhHhHHHHhh
Confidence 334455566653 269999999999999999999999999975543 4455678899999999 6999999999
Q ss_pred EEEeCCeEEEEEeccCCCchHHHHHHc-CCC--CHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEE
Q 042823 92 TYEDETAVHVVMELCEGGDLFDRIIAK-GYN--SERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKV 168 (477)
Q Consensus 92 ~~~~~~~~~lv~e~~~gg~L~~~l~~~-~~~--~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl 168 (477)
.+..++++-|.||-++||||.++|... +++ .|..+..+.+||++||.|||.+.|||||||-+|+|+. .-.|.+||
T Consensus 640 s~senGf~kIFMEqVPGGSLSsLLrskWGPlKDNEstm~fYtkQILeGLkYLHen~IVHRDIKGDNVLvN--TySGvlKI 717 (1226)
T KOG4279|consen 640 SVSENGFFKIFMEQVPGGSLSSLLRSKWGPLKDNESTMNFYTKQILEGLKYLHENKIVHRDIKGDNVLVN--TYSGVLKI 717 (1226)
T ss_pred ccCCCCeEEEEeecCCCCcHHHHHHhccCCCccchhHHHHHHHHHHHHhhhhhhcceeeccccCCcEEEe--eccceEEe
Confidence 999999999999999999999999764 666 8899999999999999999999999999999999883 45689999
Q ss_pred eecCCccccCC-Ccceecccccccccchhhhhh---hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccC
Q 042823 169 TDFGSALLFEE-GQVYRDIVGSGFYIAPEVLRR---RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDF 244 (477)
Q Consensus 169 ~Dfg~a~~~~~-~~~~~~~~gt~~y~aPE~~~~---~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~ 244 (477)
.|||.++.+.. ++...++.||..|||||++.. .|+.++|||||||++.||.||+|||........ ....-|.+..
T Consensus 718 SDFGTsKRLAginP~TETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqA-AMFkVGmyKv 796 (1226)
T KOG4279|consen 718 SDFGTSKRLAGINPCTETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQA-AMFKVGMYKV 796 (1226)
T ss_pred cccccchhhccCCccccccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhH-hhhhhcceec
Confidence 99999887644 344567899999999999963 599999999999999999999999976544322 2223344444
Q ss_pred CCCCCCCCCHHHHHHHHHhcccCccccCCHHHHhcCcccCcCC
Q 042823 245 DTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESG 287 (477)
Q Consensus 245 ~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~~ 287 (477)
.++....+|.+++.||.+|+.++|..||+|.++|..||++...
T Consensus 797 HP~iPeelsaeak~FilrcFepd~~~R~sA~~LL~DpFlq~~~ 839 (1226)
T KOG4279|consen 797 HPPIPEELSAEAKNFILRCFEPDPCDRPSAKDLLQDPFLQHNN 839 (1226)
T ss_pred CCCCcHHHHHHHHHHHHHHcCCCcccCccHHHhccCcccccCC
Confidence 5444457889999999999999999999999999999998763
|
|
| >cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-43 Score=336.77 Aligned_cols=260 Identities=26% Similarity=0.405 Sum_probs=217.9
Q ss_pred ccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCe
Q 042823 19 EDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETA 98 (477)
Q Consensus 19 ~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~ 98 (477)
.++..+|.+.+.||+|+||.||+|.+..+++.||+|.+.............+.+|+.++..+ +||||+++++++.++..
T Consensus 11 ~~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~niv~~~~~~~~~~~ 89 (307)
T cd06607 11 DDPEKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQL-RHPNTIEYKGCYLREHT 89 (307)
T ss_pred CCcchhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhC-CCCCEEEEEEEEEeCCe
Confidence 56667899999999999999999999989999999998654433334456788999999999 79999999999999999
Q ss_pred EEEEEeccCCCchHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCcccc
Q 042823 99 VHVVMELCEGGDLFDRIIA-KGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLF 177 (477)
Q Consensus 99 ~~lv~e~~~gg~L~~~l~~-~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~ 177 (477)
.|+||||+.| +|.+.+.. .+.+++..+..++.|++.||.|||+.|++||||+|+||++ +.++.+||+|||++...
T Consensus 90 ~~lv~e~~~g-~l~~~~~~~~~~l~~~~~~~~~~ql~~~L~~LH~~~i~H~dl~p~nIl~---~~~~~~kL~dfg~~~~~ 165 (307)
T cd06607 90 AWLVMEYCLG-SASDILEVHKKPLQEVEIAAICHGALQGLAYLHSHERIHRDIKAGNILL---TEPGTVKLADFGSASLV 165 (307)
T ss_pred EEEEHHhhCC-CHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEE---CCCCCEEEeecCcceec
Confidence 9999999975 77777654 4568999999999999999999999999999999999999 77889999999988765
Q ss_pred CCCcceecccccccccchhhhh----hhcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCCCC
Q 042823 178 EEGQVYRDIVGSGFYIAPEVLR----RRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSIS 253 (477)
Q Consensus 178 ~~~~~~~~~~gt~~y~aPE~~~----~~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 253 (477)
... ....|++.|+|||++. +.++.++||||+|+++|+|+||.+||...........+....... .....++
T Consensus 166 ~~~---~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 240 (307)
T cd06607 166 SPA---NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNDSPT--LSSNDWS 240 (307)
T ss_pred CCC---CCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHHHHHHHhcCCCCC--CCchhhC
Confidence 433 2346888999999873 458889999999999999999999998776655555444332211 1112467
Q ss_pred HHHHHHHHHhcccCccccCCHHHHhcCcccCcCCC
Q 042823 254 STAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGE 288 (477)
Q Consensus 254 ~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~~~ 288 (477)
+.++++|.+||..+|++||++.+++.|||+.....
T Consensus 241 ~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~~ 275 (307)
T cd06607 241 DYFRNFVDSCLQKIPQDRPSSEELLKHRFVLRERP 275 (307)
T ss_pred HHHHHHHHHHhcCChhhCcCHHHHhcChhhcccCC
Confidence 89999999999999999999999999999987543
|
Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily |
| >cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-43 Score=334.58 Aligned_cols=261 Identities=23% Similarity=0.365 Sum_probs=215.1
Q ss_pred cccccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEe
Q 042823 16 KAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYED 95 (477)
Q Consensus 16 ~~~~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~ 95 (477)
.......++|.+.+.||+|+||.||+|.++.+++.+|+|++.... .....+.+|+.++.++.+|||++++++++..
T Consensus 15 ~~~~~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~----~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~ 90 (291)
T cd06639 15 ESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPIS----DVDEEIEAEYNILQSLPNHPNVVKFYGMFYK 90 (291)
T ss_pred ccCCCCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccc----cHHHHHHHHHHHHHHhcCCCCeEEEEEEEEe
Confidence 455667889999999999999999999999999999999886432 1235577899999988789999999999865
Q ss_pred C-----CeEEEEEeccCCCchHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCE
Q 042823 96 E-----TAVHVVMELCEGGDLFDRIIA----KGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALL 166 (477)
Q Consensus 96 ~-----~~~~lv~e~~~gg~L~~~l~~----~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~ 166 (477)
. ..+|+||||++||+|.+++.. ...+++..++.++.|++.||.|||+.|++||||||+||++ +..+.+
T Consensus 91 ~~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~nili---~~~~~~ 167 (291)
T cd06639 91 ADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNRIIHRDVKGNNILL---TTEGGV 167 (291)
T ss_pred ccccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEE---cCCCCE
Confidence 3 368999999999999988753 4568999999999999999999999999999999999999 667789
Q ss_pred EEeecCCccccCCCc-ceecccccccccchhhhhh------hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHc
Q 042823 167 KVTDFGSALLFEEGQ-VYRDIVGSGFYIAPEVLRR------RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQ 239 (477)
Q Consensus 167 kl~Dfg~a~~~~~~~-~~~~~~gt~~y~aPE~~~~------~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~ 239 (477)
||+|||++....... ......|+..|+|||++.. .++.++||||+||++|+|++|.+||...........+.+
T Consensus 168 kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~~~~~~~~ 247 (291)
T cd06639 168 KLVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVKTLFKIPR 247 (291)
T ss_pred EEeecccchhcccccccccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHHHHHHHHhc
Confidence 999999887654322 1234568899999999753 267899999999999999999999987766555555544
Q ss_pred CCccCCCCCCCCCCHHHHHHHHHhcccCccccCCHHHHhcCcccC
Q 042823 240 GEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLR 284 (477)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~ 284 (477)
...... .....++..+.++|.+||+.+|++||++.++++||||+
T Consensus 248 ~~~~~~-~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~~~~~ 291 (291)
T cd06639 248 NPPPTL-LHPEKWCRSFNHFISQCLIKDFEARPSVTHLLEHPFIK 291 (291)
T ss_pred CCCCCC-CcccccCHHHHHHHHHHhhcChhhCcCHHHHhcCcccC
Confidence 332211 11234678899999999999999999999999999984
|
Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre |
| >KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-45 Score=339.51 Aligned_cols=260 Identities=32% Similarity=0.493 Sum_probs=223.6
Q ss_pred ccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 042823 23 LHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVV 102 (477)
Q Consensus 23 ~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~lv 102 (477)
..|+.-++||+||||.||-|+.+.||+.||+|.+.++......-.....+|-+|+.++ +.|.||.+-.+|++.+.+++|
T Consensus 185 n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV-~s~FiVslaYAfeTkd~LClV 263 (591)
T KOG0986|consen 185 NTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKV-SSPFIVSLAYAFETKDALCLV 263 (591)
T ss_pred cceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHh-ccCcEEEEeeeecCCCceEEE
Confidence 3466778999999999999999999999999998766543333445567888898888 799999999999999999999
Q ss_pred EeccCCCchHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCCC
Q 042823 103 MELCEGGDLFDRIIAKG--YNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEG 180 (477)
Q Consensus 103 ~e~~~gg~L~~~l~~~~--~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~ 180 (477)
|..++||+|.-.|.+.+ .+++..+..++.+|+.||.+||+.+||.|||||+|||+ ++.|+|+|+|+|+|..+..+
T Consensus 264 LtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~~iVYRDLKPeNILL---Dd~GhvRISDLGLAvei~~g 340 (591)
T KOG0986|consen 264 LTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRRRIVYRDLKPENILL---DDHGHVRISDLGLAVEIPEG 340 (591)
T ss_pred EEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhcceeeccCChhheee---ccCCCeEeeccceEEecCCC
Confidence 99999999988887765 79999999999999999999999999999999999999 99999999999999999888
Q ss_pred cceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCCCCHHHHHH
Q 042823 181 QVYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDL 259 (477)
Q Consensus 181 ~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l 259 (477)
....+.+||..|||||++.+ .|+...|.|||||++|+|+.|+.||.......-.+.+-+....-+.......|++++++
T Consensus 341 ~~~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk~eEvdrr~~~~~~ey~~kFS~eaksl 420 (591)
T KOG0986|consen 341 KPIRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVKREEVDRRTLEDPEEYSDKFSEEAKSL 420 (591)
T ss_pred CccccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhhhhHHHHHHHHhcchhhcccccCHHHHHH
Confidence 88888899999999999974 69999999999999999999999997654433333333332222333335789999999
Q ss_pred HHHhcccCccccCC-----HHHHhcCcccCcC
Q 042823 260 VRRMLTKDPKRRIT-----AAQVLEHPWLRES 286 (477)
Q Consensus 260 i~~~l~~dp~~R~s-----~~~~l~h~~~~~~ 286 (477)
.+.+|++||.+|.. ++++.+||||+..
T Consensus 421 c~~LL~Kdp~~RLGcrg~ga~evk~HpfFk~l 452 (591)
T KOG0986|consen 421 CEGLLTKDPEKRLGCRGEGAQEVKEHPFFKDL 452 (591)
T ss_pred HHHHHccCHHHhccCCCcCcchhhhCcccccC
Confidence 99999999999984 6799999999874
|
|
| >cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-43 Score=333.22 Aligned_cols=255 Identities=25% Similarity=0.398 Sum_probs=212.3
Q ss_pred ccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCC---
Q 042823 21 VMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDET--- 97 (477)
Q Consensus 21 ~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~--- 97 (477)
..++|++.+.||+|++|.||+|.++.+++.+++|++.... .....+.+|+.++.++.+||||+++++++....
T Consensus 4 ~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~----~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~ 79 (275)
T cd06608 4 PTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIE----DEEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPG 79 (275)
T ss_pred chhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCc----hhHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCC
Confidence 4579999999999999999999999899999999986543 234678899999999878999999999997644
Q ss_pred ---eEEEEEeccCCCchHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEee
Q 042823 98 ---AVHVVMELCEGGDLFDRIIA----KGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTD 170 (477)
Q Consensus 98 ---~~~lv~e~~~gg~L~~~l~~----~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~D 170 (477)
.+|+||||+++++|.+++.. ...+++..+..++.|++.||.|||+.|++||||+|+||++ +.++.+||+|
T Consensus 80 ~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~~l~p~ni~~---~~~~~~~l~d 156 (275)
T cd06608 80 NDDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENKVIHRDIKGQNILL---TKNAEVKLVD 156 (275)
T ss_pred cceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEE---ccCCeEEECC
Confidence 48999999999999988865 3578999999999999999999999999999999999999 6778899999
Q ss_pred cCCccccCCC-cceecccccccccchhhhhh------hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCcc
Q 042823 171 FGSALLFEEG-QVYRDIVGSGFYIAPEVLRR------RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEID 243 (477)
Q Consensus 171 fg~a~~~~~~-~~~~~~~gt~~y~aPE~~~~------~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~ 243 (477)
||.+...... .......|++.|+|||++.. .++.++|||||||++|+|++|.+||...........+......
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~ 236 (275)
T cd06608 157 FGVSAQLDSTLGRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMRALFKIPRNPPP 236 (275)
T ss_pred CccceecccchhhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchHHHHHHhhccCCC
Confidence 9988755332 22234568999999999742 3678999999999999999999999876555555555444321
Q ss_pred CCCCCCCCCCHHHHHHHHHhcccCccccCCHHHHhcCccc
Q 042823 244 FDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWL 283 (477)
Q Consensus 244 ~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~ 283 (477)
.. .....+++.+++||.+||..||++|||+.++++|||+
T Consensus 237 ~~-~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~~~~~ 275 (275)
T cd06608 237 TL-KSPENWSKKFNDFISECLIKNYEQRPFMEELLEHPFI 275 (275)
T ss_pred CC-CchhhcCHHHHHHHHHHhhcChhhCcCHHHHhcCCCC
Confidence 11 1112368899999999999999999999999999996
|
Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I |
| >PHA03207 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-43 Score=352.29 Aligned_cols=257 Identities=24% Similarity=0.364 Sum_probs=207.9
Q ss_pred ccccccccccccccccccCCeEEEEEEEc--cCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEE
Q 042823 17 AYEDVMLHYFFGRMLGRGQFGVSYLCTEN--STNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYE 94 (477)
Q Consensus 17 ~~~~~~~~Y~~~~~iG~G~~g~V~~~~~~--~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~ 94 (477)
+...+..+|.+++.||+|+||.||+|... .++..||+|.+... ....+|+.++..+ +||||+++++++.
T Consensus 86 ~~~~~~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~--------~~~~~E~~il~~l-~h~~iv~~~~~~~ 156 (392)
T PHA03207 86 PASVVRMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG--------KTPGREIDILKTI-SHRAIINLIHAYR 156 (392)
T ss_pred cchhccCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc--------ccHHHHHHHHHhc-CCCCccceeeeEe
Confidence 34456678999999999999999999764 45678999987542 1245799999999 7999999999999
Q ss_pred eCCeEEEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCc
Q 042823 95 DETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSA 174 (477)
Q Consensus 95 ~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a 174 (477)
....+|+|||++. ++|.+++...+.+++.++..++.||+.||.|||++||+||||||+|||+ +..+.+||+|||++
T Consensus 157 ~~~~~~lv~e~~~-~~l~~~l~~~~~l~~~~~~~i~~ql~~aL~~LH~~givHrDlkp~Nill---~~~~~~~l~DfG~a 232 (392)
T PHA03207 157 WKSTVCMVMPKYK-CDLFTYVDRSGPLPLEQAITIQRRLLEALAYLHGRGIIHRDVKTENIFL---DEPENAVLGDFGAA 232 (392)
T ss_pred eCCEEEEEehhcC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEE---cCCCCEEEccCccc
Confidence 9999999999996 5899999777889999999999999999999999999999999999999 77889999999998
Q ss_pred cccCCCc---ceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChh---hHHHHHHcC----Ccc
Q 042823 175 LLFEEGQ---VYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKK---GTYDAILQG----EID 243 (477)
Q Consensus 175 ~~~~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~---~~~~~i~~~----~~~ 243 (477)
....... ......||+.|+|||++.+ .|+.++|||||||++|+|++|..||.+.... ..+..+.+. ...
T Consensus 233 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~ 312 (392)
T PHA03207 233 CKLDAHPDTPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLE 312 (392)
T ss_pred cccCcccccccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccc
Confidence 7654322 2234679999999999874 5899999999999999999999999775432 112222110 000
Q ss_pred CCC------------------C--CC------CCCCHHHHHHHHHhcccCccccCCHHHHhcCcccCcC
Q 042823 244 FDT------------------D--PW------PSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRES 286 (477)
Q Consensus 244 ~~~------------------~--~~------~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~ 286 (477)
++. . .. ...+.++.+||.+||..||++|||+.++|.||||+..
T Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~p~f~~~ 381 (392)
T PHA03207 313 FPQNGSTNLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSLPLFTKE 381 (392)
T ss_pred cCCccchhHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhCchhhcc
Confidence 000 0 00 1246788999999999999999999999999999764
|
|
| >cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-43 Score=327.66 Aligned_cols=252 Identities=30% Similarity=0.486 Sum_probs=218.9
Q ss_pred cccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEE
Q 042823 24 HYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVVM 103 (477)
Q Consensus 24 ~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~lv~ 103 (477)
+|++.+.||.|+||.||.+.+..+++.+++|.+..... .......+.+|+.+++++ +||||+++++++.+....++||
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~~~~ 78 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRL-SEKERRDALNEIVILSLL-QHPNIIAYYNHFMDDNTLLIEM 78 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeeccc-chhHHHHHHHHHHHHHhC-CCCCeeEEEeEEecCCeEEEEE
Confidence 68999999999999999999999999999999865432 223456678999999999 7999999999999999999999
Q ss_pred eccCCCchHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCCCc
Q 042823 104 ELCEGGDLFDRIIAK--GYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQ 181 (477)
Q Consensus 104 e~~~gg~L~~~l~~~--~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~ 181 (477)
|||+||+|.+++... ..+++.++..++.|++.||.|||+.|++||||+|+||++ +..+.+||+|||.+.......
T Consensus 79 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~ni~~---~~~~~~kl~d~~~~~~~~~~~ 155 (256)
T cd08221 79 EYANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAGILHRDIKTLNIFL---TKAGLIKLGDFGISKILGSEY 155 (256)
T ss_pred EecCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChHhEEE---eCCCCEEECcCcceEEccccc
Confidence 999999999999775 468999999999999999999999999999999999999 667889999999987654433
Q ss_pred -ceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCCCCHHHHHH
Q 042823 182 -VYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDL 259 (477)
Q Consensus 182 -~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l 259 (477)
......|++.|+|||++.+ .++.++||||+|+++|+|++|..||......+....+..+...... +.++.++.++
T Consensus 156 ~~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~ 232 (256)
T cd08221 156 SMAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNPLNLVVKIVQGNYTPVV---SVYSSELISL 232 (256)
T ss_pred ccccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCCc---cccCHHHHHH
Confidence 2344578999999999865 4788999999999999999999999887777777777665543221 4678999999
Q ss_pred HHHhcccCccccCCHHHHhcCccc
Q 042823 260 VRRMLTKDPKRRITAAQVLEHPWL 283 (477)
Q Consensus 260 i~~~l~~dp~~R~s~~~~l~h~~~ 283 (477)
+.+||..+|.+|||+.++++|||+
T Consensus 233 i~~~l~~~p~~R~s~~~ll~~~~l 256 (256)
T cd08221 233 VHSLLQQDPEKRPTADEVLDQPLL 256 (256)
T ss_pred HHHHcccCcccCCCHHHHhhCcCC
Confidence 999999999999999999999986
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa |
| >cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-43 Score=334.56 Aligned_cols=255 Identities=24% Similarity=0.374 Sum_probs=210.3
Q ss_pred cccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEE-----
Q 042823 20 DVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYE----- 94 (477)
Q Consensus 20 ~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~----- 94 (477)
...+.|++.+.||+|+||.||+|.+..+++.+|+|++.... .....+..|+.++..+.+||||+++++++.
T Consensus 13 ~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~----~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~ 88 (282)
T cd06636 13 DPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE----DEEEEIKLEINMLKKYSHHRNIATYYGAFIKKSPP 88 (282)
T ss_pred ChhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecCh----HHHHHHHHHHHHHHHhcCCCcEEEEeeehhccccc
Confidence 34578999999999999999999999999999999886432 234567889999998878999999999985
Q ss_pred -eCCeEEEEEeccCCCchHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeec
Q 042823 95 -DETAVHVVMELCEGGDLFDRIIAK--GYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDF 171 (477)
Q Consensus 95 -~~~~~~lv~e~~~gg~L~~~l~~~--~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Df 171 (477)
....+|+||||+++|+|.+++... ..+++..+..++.||+.||.|||+.|++||||+|+||++ +..+.++|+||
T Consensus 89 ~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dl~~~nili---~~~~~~~l~df 165 (282)
T cd06636 89 GHDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAHKVIHRDIKGQNVLL---TENAEVKLVDF 165 (282)
T ss_pred CCCCEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEE---CCCCCEEEeeC
Confidence 356789999999999999988763 457888899999999999999999999999999999999 67788999999
Q ss_pred CCccccCCC-cceecccccccccchhhhh------hhcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccC
Q 042823 172 GSALLFEEG-QVYRDIVGSGFYIAPEVLR------RRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDF 244 (477)
Q Consensus 172 g~a~~~~~~-~~~~~~~gt~~y~aPE~~~------~~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~ 244 (477)
|++...... .......|++.|+|||++. ..++.++|||||||++|+|++|.+||...........+.....
T Consensus 166 g~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~-- 243 (282)
T cd06636 166 GVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPP-- 243 (282)
T ss_pred cchhhhhccccCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHhhhhhHhhCCC--
Confidence 988755322 1223457899999999974 2478899999999999999999999976654443333332211
Q ss_pred CCCCCCCCCHHHHHHHHHhcccCccccCCHHHHhcCccc
Q 042823 245 DTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWL 283 (477)
Q Consensus 245 ~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~ 283 (477)
.......++..+.+||.+||+.||.+|||+.++++||||
T Consensus 244 ~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~~~~~ 282 (282)
T cd06636 244 PKLKSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLKHPFI 282 (282)
T ss_pred CCCcccccCHHHHHHHHHHhCCChhhCcCHHHHhcCCCC
Confidence 111223578999999999999999999999999999997
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea |
| >cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-43 Score=339.06 Aligned_cols=261 Identities=30% Similarity=0.459 Sum_probs=214.8
Q ss_pred cccccccccccCCeEEEEEEEccCCceEEEEEeecCCcc--chhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEE
Q 042823 24 HYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKM--RLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHV 101 (477)
Q Consensus 24 ~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~--~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~l 101 (477)
+|.+.+.||+|+||.||+|.+..+++.||+|.+...... .......+.+|+.++..+ +||||+++++++.+....|+
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~l 79 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQEL-KHPNIIGLLDVFGHKSNINL 79 (298)
T ss_pred CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhc-CCCCChhhhheeecCCEEEE
Confidence 588999999999999999999999999999999765432 122334567899999999 69999999999999999999
Q ss_pred EEeccCCCchHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCCC
Q 042823 102 VMELCEGGDLFDRIIAKG-YNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEG 180 (477)
Q Consensus 102 v~e~~~gg~L~~~l~~~~-~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~ 180 (477)
||||+ +|+|.+++.... .+++..+..++.||++||.|||++|++||||+|+||++ +.++.++|+|||++......
T Consensus 80 v~e~~-~~~L~~~i~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nill---~~~~~~~l~dfg~~~~~~~~ 155 (298)
T cd07841 80 VFEFM-ETDLEKVIKDKSIVLTPADIKSYMLMTLRGLEYLHSNWILHRDLKPNNLLI---ASDGVLKLADFGLARSFGSP 155 (298)
T ss_pred EEccc-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCChhhEEE---cCCCCEEEccceeeeeccCC
Confidence 99999 889999998776 78999999999999999999999999999999999999 67788999999998766433
Q ss_pred -cceecccccccccchhhhhh--hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCC------------
Q 042823 181 -QVYRDIVGSGFYIAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFD------------ 245 (477)
Q Consensus 181 -~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~------------ 245 (477)
.......+++.|+|||.+.+ .++.++||||+||++|+|++|.+||.+......+..+........
T Consensus 156 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (298)
T cd07841 156 NRKMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKIFEALGTPTEENWPGVTSLPD 235 (298)
T ss_pred CccccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHHHHHHHHHHcCCCchhhhhhcccccc
Confidence 22233457888999999854 478899999999999999999988887666554444432110000
Q ss_pred ------------CCCCCCCCHHHHHHHHHhcccCccccCCHHHHhcCcccCcCCCC
Q 042823 246 ------------TDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEA 289 (477)
Q Consensus 246 ------------~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~~~~ 289 (477)
...++..+..+.++|.+||+++|++|||+.++++||||++....
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~~~~~~~~~~ 291 (298)
T cd07841 236 YVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEHPYFSNDPAP 291 (298)
T ss_pred cccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhCccccCCCCC
Confidence 00123457899999999999999999999999999999986543
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is |
| >cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-43 Score=328.91 Aligned_cols=252 Identities=26% Similarity=0.425 Sum_probs=213.2
Q ss_pred cccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEE
Q 042823 22 MLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHV 101 (477)
Q Consensus 22 ~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~l 101 (477)
.++|.+.+.||+|+||.||+|.+..+++.+|+|.+.... ....+.+|+.+++.+ +||||+++++++.....+|+
T Consensus 2 ~~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~-----~~~~~~~e~~~~~~l-~~~~i~~~~~~~~~~~~~~l 75 (256)
T cd06612 2 EEVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEE-----DLQEIIKEISILKQC-DSPYIVKYYGSYFKNTDLWI 75 (256)
T ss_pred cccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHH-----HHHHHHHHHHHHHhC-CCCcEeeeeeeeecCCcEEE
Confidence 468999999999999999999999889999999985432 256788999999999 89999999999999999999
Q ss_pred EEeccCCCchHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCCC
Q 042823 102 VMELCEGGDLFDRIIA-KGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEG 180 (477)
Q Consensus 102 v~e~~~gg~L~~~l~~-~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~ 180 (477)
++||+++++|.+++.. ...+++..+..++.|++.||.|||+.+++||||+|+||++ +..+.+||+|||++......
T Consensus 76 ~~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~ni~~---~~~~~~~l~dfg~~~~~~~~ 152 (256)
T cd06612 76 VMEYCGAGSVSDIMKITNKTLTEEEIAAILYQTLKGLEYLHSNKKIHRDIKAGNILL---NEEGQAKLADFGVSGQLTDT 152 (256)
T ss_pred EEecCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEE---CCCCcEEEcccccchhcccC
Confidence 9999999999999876 4568999999999999999999999999999999999999 67788999999998876543
Q ss_pred c-ceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCCCCHHHHH
Q 042823 181 Q-VYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKD 258 (477)
Q Consensus 181 ~-~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 258 (477)
. ......|+..|+|||++.+ .++.++||||+|+++|+|++|.+||...........+....... ....+.++..+.+
T Consensus 153 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 231 (256)
T cd06612 153 MAKRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIFMIPNKPPPT-LSDPEKWSPEFND 231 (256)
T ss_pred ccccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhhhhhccCCCCC-CCchhhcCHHHHH
Confidence 3 2234468889999999865 57889999999999999999999997765544443333221111 1112357789999
Q ss_pred HHHHhcccCccccCCHHHHhcCccc
Q 042823 259 LVRRMLTKDPKRRITAAQVLEHPWL 283 (477)
Q Consensus 259 li~~~l~~dp~~R~s~~~~l~h~~~ 283 (477)
+|.+||+.+|++|||+.++|+||||
T Consensus 232 ~i~~~l~~~P~~Rps~~~il~~~~~ 256 (256)
T cd06612 232 FVKKCLVKDPEERPSAIQLLQHPFI 256 (256)
T ss_pred HHHHHHhcChhhCcCHHHHhcCCCC
Confidence 9999999999999999999999997
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a |
| >cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-43 Score=335.09 Aligned_cols=261 Identities=25% Similarity=0.369 Sum_probs=212.3
Q ss_pred ccccccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEE
Q 042823 15 GKAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYE 94 (477)
Q Consensus 15 ~~~~~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~ 94 (477)
-.......++|++.+.||+|+||.||+|.++.+++.+|+|++.... .....+.+|+.++..+.+||||+++++++.
T Consensus 10 ~~~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~----~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~ 85 (286)
T cd06638 10 FDSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIH----DIDEEIEAEYNILKALSDHPNVVKFYGMYY 85 (286)
T ss_pred eecCCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeecccc----chHHHHHHHHHHHHHHhcCCCeeeeeeeee
Confidence 3556678899999999999999999999999999999999875322 123457789999999877999999999873
Q ss_pred -----eCCeEEEEEeccCCCchHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCC
Q 042823 95 -----DETAVHVVMELCEGGDLFDRIIA----KGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNAL 165 (477)
Q Consensus 95 -----~~~~~~lv~e~~~gg~L~~~l~~----~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~ 165 (477)
....+|+||||++|++|.+++.. ...+++..+..++.|++.||.|||+++++||||||+||++ ...+.
T Consensus 86 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili---~~~~~ 162 (286)
T cd06638 86 KKDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNKTIHRDVKGNNILL---TTEGG 162 (286)
T ss_pred ecccCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCCccccCCCHHhEEE---CCCCC
Confidence 45679999999999999988753 3468899999999999999999999999999999999999 66778
Q ss_pred EEEeecCCccccCCCc-ceecccccccccchhhhh------hhcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHH
Q 042823 166 LKVTDFGSALLFEEGQ-VYRDIVGSGFYIAPEVLR------RRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAIL 238 (477)
Q Consensus 166 ~kl~Dfg~a~~~~~~~-~~~~~~gt~~y~aPE~~~------~~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~ 238 (477)
+||+|||++....... ......|++.|+|||++. ..++.++||||+||++|+|++|.+||...........+.
T Consensus 163 ~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~~~~~~~ 242 (286)
T cd06638 163 VKLVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMRALFKIP 242 (286)
T ss_pred EEEccCCceeecccCCCccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchhHHHhhcc
Confidence 9999999987654322 223456899999999874 247889999999999999999999997765544433332
Q ss_pred cCCccCCCCCCCCCCHHHHHHHHHhcccCccccCCHHHHhcCccc
Q 042823 239 QGEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWL 283 (477)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~ 283 (477)
...... ......++..+.+++.+||+.||++|||+.++++|+||
T Consensus 243 ~~~~~~-~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~~~~ 286 (286)
T cd06638 243 RNPPPT-LHQPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQHVFI 286 (286)
T ss_pred ccCCCc-ccCCCCcCHHHHHHHHHHccCCcccCCCHHHHhhcccC
Confidence 221111 11112357899999999999999999999999999997
|
Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear |
| >cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-43 Score=332.69 Aligned_cols=257 Identities=28% Similarity=0.411 Sum_probs=216.4
Q ss_pred cccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEE
Q 042823 22 MLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHV 101 (477)
Q Consensus 22 ~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~l 101 (477)
...|+..+.||+|+||.||+|.+..++..||+|++..... ......+.+|+.++..+ +||||+++++++.++..+|+
T Consensus 3 ~~~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~l 79 (277)
T cd06640 3 EELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEA--EDEIEDIQQEITVLSQC-DSPYVTKYYGSYLKGTKLWI 79 (277)
T ss_pred HHhhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEecccc--HHHHHHHHHHHHHHHhC-CCCCEeeEEEEEEECCEEEE
Confidence 4578899999999999999999999999999999875432 23456788899999999 79999999999999999999
Q ss_pred EEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCCCc
Q 042823 102 VMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQ 181 (477)
Q Consensus 102 v~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~ 181 (477)
||||++||+|.+++.. +.+++.++..++.|++.||.|||+.+++|+||+|+||++ +..+.++|+|||++.......
T Consensus 80 v~e~~~~~~L~~~i~~-~~l~~~~~~~~~~~l~~~l~~lh~~~ivH~dl~p~Nil~---~~~~~~~l~dfg~~~~~~~~~ 155 (277)
T cd06640 80 IMEYLGGGSALDLLRA-GPFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLL---SEQGDVKLADFGVAGQLTDTQ 155 (277)
T ss_pred EEecCCCCcHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccCcCCChhhEEE---cCCCCEEEcccccceeccCCc
Confidence 9999999999998865 568999999999999999999999999999999999999 677889999999987654332
Q ss_pred c-eecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCCCCHHHHHH
Q 042823 182 V-YRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDL 259 (477)
Q Consensus 182 ~-~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l 259 (477)
. .....++..|+|||++.+ .++.++|+|||||++|+|++|.+||...........+..... +.....++..+.++
T Consensus 156 ~~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l 232 (277)
T cd06640 156 IKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLIPKNNP---PTLTGEFSKPFKEF 232 (277)
T ss_pred cccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhHhhhhhcCCC---CCCchhhhHHHHHH
Confidence 2 233467889999999864 578899999999999999999999987665555444433221 12223578899999
Q ss_pred HHHhcccCccccCCHHHHhcCcccCcCCC
Q 042823 260 VRRMLTKDPKRRITAAQVLEHPWLRESGE 288 (477)
Q Consensus 260 i~~~l~~dp~~R~s~~~~l~h~~~~~~~~ 288 (477)
+.+||..+|++||++.++++|||+.....
T Consensus 233 i~~~l~~~p~~Rp~~~~il~~~~~~~~~~ 261 (277)
T cd06640 233 IDACLNKDPSFRPTAKELLKHKFIVKNAK 261 (277)
T ss_pred HHHHcccCcccCcCHHHHHhChHhhhcch
Confidence 99999999999999999999999976554
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter |
| >cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-43 Score=331.28 Aligned_cols=256 Identities=25% Similarity=0.422 Sum_probs=212.6
Q ss_pred cccccccccccCCeEEEEEEEccCCceEEEEEeecCCccc-------hhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeC
Q 042823 24 HYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMR-------LAENDMIRREIQIRLYLSGQPNVVEFKSTYEDE 96 (477)
Q Consensus 24 ~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~-------~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~ 96 (477)
+|.+.+.||+|+||.||+|.+..+++.+|+|.+....... ....+.+.+|+.++..+ +||||+++++++...
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~ 80 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDL-DHLNIVQYLGFETTE 80 (272)
T ss_pred ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhc-CCCCcceEEEEeccC
Confidence 6889999999999999999999899999999885422111 11234677899999999 799999999999999
Q ss_pred CeEEEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccc
Q 042823 97 TAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALL 176 (477)
Q Consensus 97 ~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~ 176 (477)
...++||||++|++|.+++...+.+++..+..++.|++.||.|||++|++||||+|+||++ +.++.++|+|||++..
T Consensus 81 ~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~~~nil~---~~~~~~~l~d~~~~~~ 157 (272)
T cd06629 81 EYLSIFLEYVPGGSIGSCLRTYGRFEEQLVRFFTEQVLEGLAYLHSKGILHRDLKADNLLV---DADGICKISDFGISKK 157 (272)
T ss_pred CceEEEEecCCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCCeeecCCChhhEEE---cCCCeEEEeecccccc
Confidence 9999999999999999999888889999999999999999999999999999999999999 6788999999999876
Q ss_pred cCCCc---ceecccccccccchhhhhh---hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcC--CccCCCCC
Q 042823 177 FEEGQ---VYRDIVGSGFYIAPEVLRR---RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQG--EIDFDTDP 248 (477)
Q Consensus 177 ~~~~~---~~~~~~gt~~y~aPE~~~~---~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~--~~~~~~~~ 248 (477)
..... ......|+..|+|||.+.. .++.++|+||||+++|+|++|..||...........+... ...++...
T Consensus 158 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (272)
T cd06629 158 SDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIAAMFKLGNKRSAPPIPPDV 237 (272)
T ss_pred ccccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchHHHHHHhhccccCCcCCccc
Confidence 43221 1223467889999999863 3788999999999999999999999655544433333222 22233333
Q ss_pred CCCCCHHHHHHHHHhcccCccccCCHHHHhcCccc
Q 042823 249 WPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWL 283 (477)
Q Consensus 249 ~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~ 283 (477)
.+.++..++++|.+||..+|++|||+.++++|||+
T Consensus 238 ~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~ 272 (272)
T cd06629 238 SMNLSPVALDFLNACFTINPDNRPTARELLQHPFI 272 (272)
T ss_pred cccCCHHHHHHHHHHhcCChhhCCCHHHHhhCCCC
Confidence 45678999999999999999999999999999996
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte |
| >cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-43 Score=336.30 Aligned_cols=255 Identities=29% Similarity=0.495 Sum_probs=212.4
Q ss_pred cccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEE
Q 042823 24 HYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVVM 103 (477)
Q Consensus 24 ~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~lv~ 103 (477)
+|++.+.||+|+||.||+|.+..+|+.||+|++...... ......+.+|+.++.++ +||||+++++++.....+|+||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~-~~~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~~~~~~~v~ 78 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLE-GGIPNQALREIKALQAC-QHPYVVKLLDVFPHGSGFVLVM 78 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEccccc-chhhHHHHHHHHHHHhC-CCCCCcceeeEEecCCeeEEEe
Confidence 589999999999999999999999999999998754321 23346688999999999 6999999999999999999999
Q ss_pred eccCCCchHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCCCc-
Q 042823 104 ELCEGGDLFDRIIA-KGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQ- 181 (477)
Q Consensus 104 e~~~gg~L~~~l~~-~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~- 181 (477)
||+ |++|.+++.. ...+++.+++.++.||+.||.|||++|++|+||||+||++ +..+.++|+|||.+.......
T Consensus 79 e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~~---~~~~~~~l~dfg~~~~~~~~~~ 154 (286)
T cd07832 79 EYM-PSDLSEVLRDEERPLPEAQVKSYMRMLLKGVAYMHANGIMHRDLKPANLLI---SADGVLKIADFGLARLFSEEEP 154 (286)
T ss_pred ccc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCHHHEEE---cCCCcEEEeeeeecccccCCCC
Confidence 999 9999999865 4568999999999999999999999999999999999999 667889999999987664332
Q ss_pred -ceecccccccccchhhhhh--hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCc----------------
Q 042823 182 -VYRDIVGSGFYIAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEI---------------- 242 (477)
Q Consensus 182 -~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~---------------- 242 (477)
......|+..|+|||++.+ .++.++||||+||++|+|++|.+||.+......+..+.....
T Consensus 155 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (286)
T cd07832 155 RLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLAIVFRTLGTPNEETWPGLTSLPDY 234 (286)
T ss_pred CccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHHHHHHHHHcCCCChHHHhhccCcchh
Confidence 2334578999999999753 468899999999999999999998877666555444332110
Q ss_pred ---cCCC-------CCCCCCCHHHHHHHHHhcccCccccCCHHHHhcCcccC
Q 042823 243 ---DFDT-------DPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLR 284 (477)
Q Consensus 243 ---~~~~-------~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~ 284 (477)
.++. ..++..+..+.++|.+||..+|++|||+.++++||||.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h~~~~ 286 (286)
T cd07832 235 NKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRHPYFT 286 (286)
T ss_pred hcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhhCcCcC
Confidence 0000 01245678999999999999999999999999999984
|
Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea |
| >cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-43 Score=330.74 Aligned_cols=257 Identities=23% Similarity=0.418 Sum_probs=210.9
Q ss_pred cccccccccccCCeEEEEEEEccCCceEEEEEeecCCccc---hhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEE
Q 042823 24 HYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMR---LAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVH 100 (477)
Q Consensus 24 ~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~---~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~ 100 (477)
.|+..+.||+|++|.||+|.+..+++.||+|++....... ......+.+|+.+++.+ +||||+++++++.+.+.++
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~ 79 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARL-NHPHIIRMLGATCEDSHFN 79 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHc-CCCceehhhceeccCCeEE
Confidence 4888999999999999999999999999999986533211 12356788999999999 7999999999999999999
Q ss_pred EEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCC-CCEEEeecCCccccCC
Q 042823 101 VVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDN-ALLKVTDFGSALLFEE 179 (477)
Q Consensus 101 lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~-~~~kl~Dfg~a~~~~~ 179 (477)
+|+||++|++|.+++...+.+++..+..++.|++.||.|||++|++||||+|+||++ +.. ..+||+|||.+.....
T Consensus 80 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~al~~LH~~~i~H~~i~~~nil~---~~~~~~~~l~dfg~~~~~~~ 156 (268)
T cd06630 80 LFVEWMAGGSVSHLLSKYGAFKEAVIINYTEQLLRGLSYLHENQIIHRDVKGANLLI---DSTGQRLRIADFGAAARLAA 156 (268)
T ss_pred EEEeccCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE---cCCCCEEEEccccccccccc
Confidence 999999999999999888889999999999999999999999999999999999988 444 4699999999876543
Q ss_pred Cc-----ceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCC-ccCCCCCCCCC
Q 042823 180 GQ-----VYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGE-IDFDTDPWPSI 252 (477)
Q Consensus 180 ~~-----~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~-~~~~~~~~~~~ 252 (477)
.. ......|+..|+|||++.+ .++.++|+||+||++|+|++|..||...........+.... ........+.+
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (268)
T cd06630 157 KGTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHLALIFKIASATTAPSIPEHL 236 (268)
T ss_pred ccccCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhccCCCCCCchhh
Confidence 21 1123467889999999864 57899999999999999999999996544333222222111 11112222357
Q ss_pred CHHHHHHHHHhcccCccccCCHHHHhcCcccC
Q 042823 253 SSTAKDLVRRMLTKDPKRRITAAQVLEHPWLR 284 (477)
Q Consensus 253 ~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~ 284 (477)
++++.+++.+||..+|++|||+.++++||||+
T Consensus 237 ~~~~~~~i~~~l~~~p~~R~~~~~ll~~~~~~ 268 (268)
T cd06630 237 SPGLRDVTLRCLELQPEDRPPSRELLKHPVFR 268 (268)
T ss_pred CHHHHHHHHHHcCCCcccCcCHHHHhcCcccC
Confidence 89999999999999999999999999999985
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their |
| >cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-43 Score=335.67 Aligned_cols=257 Identities=27% Similarity=0.394 Sum_probs=208.1
Q ss_pred ccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCe----
Q 042823 23 LHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETA---- 98 (477)
Q Consensus 23 ~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~---- 98 (477)
++|++.+.||+|+||.||+|.+..+++.||+|.+...... ......+.+|+.++..+.+||||+++++++.....
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~-~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~ 79 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDE-EGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKP 79 (295)
T ss_pred CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccc-cCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCc
Confidence 4799999999999999999999999999999987654221 12235677899999999778999999999987665
Q ss_pred -EEEEEeccCCCchHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCC-CCCEEEeec
Q 042823 99 -VHVVMELCEGGDLFDRIIAK-----GYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDD-NALLKVTDF 171 (477)
Q Consensus 99 -~~lv~e~~~gg~L~~~l~~~-----~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~-~~~~kl~Df 171 (477)
.|+||||+++ +|.+++... ..+++..+..++.||+.||.|||++|++||||+|+||++ +. ++.+||+||
T Consensus 80 ~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~~~nil~---~~~~~~~kl~df 155 (295)
T cd07837 80 SLYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHGVMHRDLKPQNLLV---DKQKGLLKIADL 155 (295)
T ss_pred eEEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEE---ecCCCeEEEeec
Confidence 8999999986 888888653 347999999999999999999999999999999999998 44 788999999
Q ss_pred CCccccCCC-cceecccccccccchhhhhh--hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCC---
Q 042823 172 GSALLFEEG-QVYRDIVGSGFYIAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFD--- 245 (477)
Q Consensus 172 g~a~~~~~~-~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~--- 245 (477)
|.+...... .......+++.|+|||++.+ .++.++||||||+++|+|++|.+||.+.+.......+........
T Consensus 156 g~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (295)
T cd07837 156 GLGRAFSIPVKSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIFKLLGTPTEQV 235 (295)
T ss_pred ccceecCCCccccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhCCCChhh
Confidence 988754322 12223467889999998864 478999999999999999999999987765554444332110000
Q ss_pred ---------------------CCCCCCCCHHHHHHHHHhcccCccccCCHHHHhcCcccC
Q 042823 246 ---------------------TDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLR 284 (477)
Q Consensus 246 ---------------------~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~ 284 (477)
....+.+++.+.+||.+||..||.+|||+.+++.||||+
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~~~~~~ 295 (295)
T cd07837 236 WPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALTHPYFD 295 (295)
T ss_pred CcchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhcCCCcC
Confidence 011245789999999999999999999999999999984
|
Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm |
| >KOG0584 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-44 Score=348.25 Aligned_cols=259 Identities=20% Similarity=0.373 Sum_probs=222.9
Q ss_pred ccccc-cccccccccCCeEEEEEEEccCCceEEEEEeecCC-ccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCe
Q 042823 21 VMLHY-FFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKP-KMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETA 98 (477)
Q Consensus 21 ~~~~Y-~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~ 98 (477)
...+| ++...||+|+|-+||+|.|..+|..||.-.+.... ........++..|+.+++.| .||||+++|++|.+...
T Consensus 37 p~gRy~k~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL-~H~NIirfy~SW~d~~n 115 (632)
T KOG0584|consen 37 PTGRYLKFDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSL-KHPNIIRFYDSWVDTDN 115 (632)
T ss_pred CCCceeehhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccC-CCCceeeeeeheecCCC
Confidence 34555 45678999999999999999999999976554332 22345568899999999999 79999999999986554
Q ss_pred --EEEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcC--CeeccCCCCceeeeecCCCCCEEEeecCCc
Q 042823 99 --VHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMG--VMHRDLKPENFSFISRDDNALLKVTDFGSA 174 (477)
Q Consensus 99 --~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~--ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a 174 (477)
+.+|+|++.+|+|..|+++.++.+...++.|++||++||.|||++. |+|||||-+||++. +..|.|||+|+|+|
T Consensus 116 ~~in~iTEL~TSGtLr~Y~kk~~~vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFin--G~~G~VKIGDLGLA 193 (632)
T KOG0584|consen 116 KTINFITELFTSGTLREYRKKHRRVNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVN--GNLGEVKIGDLGLA 193 (632)
T ss_pred ceeeeeeecccCCcHHHHHHHhccCCHHHHHHHHHHHHHHhhhhhcCCCCccccccccceEEEc--CCcCceeecchhHH
Confidence 8899999999999999999999999999999999999999999995 99999999999883 56789999999999
Q ss_pred cccCCCcceecccccccccchhhhhhhcCCccchHhHHHHHHHHhhCCCCCCCC-ChhhHHHHHHcCCccCCCCCCCCCC
Q 042823 175 LLFEEGQVYRDIVGSGFYIAPEVLRRRYGKEIDIWSAGVILYILLSGVPPFWAE-TKKGTYDAILQGEIDFDTDPWPSIS 253 (477)
Q Consensus 175 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~l~tg~~pf~~~-~~~~~~~~i~~~~~~~~~~~~~~~~ 253 (477)
+....... ...+|||.|||||+....|+..+||||||+++.||+|+..||... +..+++.++..|..+-.... --.
T Consensus 194 tl~r~s~a-ksvIGTPEFMAPEmYEE~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~AQIYKKV~SGiKP~sl~k--V~d 270 (632)
T KOG0584|consen 194 TLLRKSHA-KSVIGTPEFMAPEMYEENYNELVDVYAFGMCMLEMVTSEYPYSECTNPAQIYKKVTSGIKPAALSK--VKD 270 (632)
T ss_pred HHhhcccc-ceeccCccccChHHHhhhcchhhhhhhhhHHHHHHHhccCChhhhCCHHHHHHHHHcCCCHHHhhc--cCC
Confidence 98765443 347999999999999999999999999999999999999999765 45677888888875432221 226
Q ss_pred HHHHHHHHHhcccCccccCCHHHHhcCcccCcC
Q 042823 254 STAKDLVRRMLTKDPKRRITAAQVLEHPWLRES 286 (477)
Q Consensus 254 ~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~ 286 (477)
+++++||.+||.. .+.|||+.++|+||||...
T Consensus 271 Pevr~fIekCl~~-~~~R~sa~eLL~d~Ff~~d 302 (632)
T KOG0584|consen 271 PEVREFIEKCLAT-KSERLSAKELLKDPFFDED 302 (632)
T ss_pred HHHHHHHHHHhcC-chhccCHHHHhhChhhccc
Confidence 8999999999999 9999999999999999875
|
|
| >cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.2e-43 Score=331.93 Aligned_cols=258 Identities=24% Similarity=0.298 Sum_probs=207.9
Q ss_pred ccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 042823 23 LHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVV 102 (477)
Q Consensus 23 ~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~lv 102 (477)
++|++.+.||+|+||.||+|.++.+|+.||+|++...... .....+..|+.+..+..+||||+++++++..++..|+|
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv 78 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNS--QEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWIC 78 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCc--HHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEE
Confidence 4689999999999999999999999999999998654322 22344556776655555899999999999999999999
Q ss_pred EeccCCCchHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHc-CCeeccCCCCceeeeecCCCCCEEEeecCCcccc
Q 042823 103 MELCEGGDLFDRIIA----KGYNSERDAATVLRAIVNAVNVCHSM-GVMHRDLKPENFSFISRDDNALLKVTDFGSALLF 177 (477)
Q Consensus 103 ~e~~~gg~L~~~l~~----~~~~~~~~~~~i~~qil~~L~~lH~~-~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~ 177 (477)
|||++ |+|.+++.. ...+++..+..++.|++.||.|||++ +++||||||+||++ +.++.+||+|||.+...
T Consensus 79 ~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~i~h~dlkp~nil~---~~~~~~kl~dfg~~~~~ 154 (283)
T cd06617 79 MEVMD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLSVIHRDVKPSNVLI---NRNGQVKLCDFGISGYL 154 (283)
T ss_pred hhhhc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEE---CCCCCEEEeeccccccc
Confidence 99997 588777754 34689999999999999999999997 99999999999999 77889999999998765
Q ss_pred CCCcceecccccccccchhhhhh-----hcCCccchHhHHHHHHHHhhCCCCCCCCC-hhhHHHHHHcCCccCCCCCCCC
Q 042823 178 EEGQVYRDIVGSGFYIAPEVLRR-----RYGKEIDIWSAGVILYILLSGVPPFWAET-KKGTYDAILQGEIDFDTDPWPS 251 (477)
Q Consensus 178 ~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~DiwslG~il~~l~tg~~pf~~~~-~~~~~~~i~~~~~~~~~~~~~~ 251 (477)
..........|+..|+|||++.+ .++.++|+||+||++|+|++|..||.... .......+..+... ..+...
T Consensus 155 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~ 232 (283)
T cd06617 155 VDSVAKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPFQQLKQVVEEPSP--QLPAEK 232 (283)
T ss_pred ccccccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccCHHHHHHHHhcCCC--CCCccc
Confidence 44333333568899999998853 46889999999999999999999996432 22333333332211 111235
Q ss_pred CCHHHHHHHHHhcccCccccCCHHHHhcCcccCcCCC
Q 042823 252 ISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGE 288 (477)
Q Consensus 252 ~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~~~ 288 (477)
+|+++.++|.+||..+|++|||+.++++||||.....
T Consensus 233 ~~~~l~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~~ 269 (283)
T cd06617 233 FSPEFQDFVNKCLKKNYKERPNYPELLQHPFFELHLS 269 (283)
T ss_pred cCHHHHHHHHHHccCChhhCcCHHHHhcCchhhhccc
Confidence 7899999999999999999999999999999987643
|
Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs |
| >cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.1e-43 Score=326.50 Aligned_cols=253 Identities=27% Similarity=0.433 Sum_probs=216.5
Q ss_pred cccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEE
Q 042823 24 HYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVVM 103 (477)
Q Consensus 24 ~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~lv~ 103 (477)
+|++.+.||+|+||.||+|.+..+++.+|+|.+..... .......+.+|+.+++.+ +||||+++++.+...+..++||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~~~~~~lv~ 78 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQM-TKDERLAAQNECQVLKLL-SHPNIIEYYENFLEDKALMIVM 78 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEecccc-ccHHHHHHHHHHHHHhhC-CCCchhheeeeEecCCEEEEEE
Confidence 58999999999999999999999999999999875432 334567788999999999 7999999999999999999999
Q ss_pred eccCCCchHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCCCc
Q 042823 104 ELCEGGDLFDRIIAK--GYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQ 181 (477)
Q Consensus 104 e~~~gg~L~~~l~~~--~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~ 181 (477)
||++|++|.+++... ..+++..+..++.|++.||.|||++|++||||+|+||++. .....+||+|||.+.......
T Consensus 79 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~--~~~~~~~l~d~~~~~~~~~~~ 156 (256)
T cd08220 79 EYAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTKLILHRDLKTQNILLD--KHKMVVKIGDFGISKILSSKS 156 (256)
T ss_pred ecCCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEc--CCCCEEEEccCCCceecCCCc
Confidence 999999999999764 3479999999999999999999999999999999999982 234568999999998765444
Q ss_pred ceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCCCCHHHHHHH
Q 042823 182 VYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLV 260 (477)
Q Consensus 182 ~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li 260 (477)
......|++.|+|||.+.+ .++.++||||+|+++|+|++|..||...+.......+..+.... ....+++.+++++
T Consensus 157 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~li 233 (256)
T cd08220 157 KAYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLPALVLKIMSGTFAP---ISDRYSPDLRQLI 233 (256)
T ss_pred cccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCchHHHHHHHHhcCCCC---CCCCcCHHHHHHH
Confidence 3344578999999999875 47889999999999999999999998877666666665543221 1235789999999
Q ss_pred HHhcccCccccCCHHHHhcCccc
Q 042823 261 RRMLTKDPKRRITAAQVLEHPWL 283 (477)
Q Consensus 261 ~~~l~~dp~~R~s~~~~l~h~~~ 283 (477)
.+||..+|++|||+.++++|||+
T Consensus 234 ~~~l~~~p~~Rpt~~~ll~~p~~ 256 (256)
T cd08220 234 LSMLNLDPSKRPQLSQIMAQPIC 256 (256)
T ss_pred HHHccCChhhCCCHHHHhhCCCC
Confidence 99999999999999999999996
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with |
| >cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.9e-43 Score=326.37 Aligned_cols=252 Identities=25% Similarity=0.493 Sum_probs=217.0
Q ss_pred cccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEE
Q 042823 24 HYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVVM 103 (477)
Q Consensus 24 ~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~lv~ 103 (477)
+|++.+.||+|+||.||++.+..+++.||+|.+..... .......+.+|+.+++.+ +||||+++++++...+..|+|+
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~lv~ 78 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKM-SPKEREESRKEVAVLSNM-KHPNIVQYQESFEENGNLYIVM 78 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhC-ChHHHHHHHHHHHHHHhC-CCCCeeeeEeeecCCCeEEEEE
Confidence 58999999999999999999999999999999865322 233456788999999999 7999999999999999999999
Q ss_pred eccCCCchHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCCCc
Q 042823 104 ELCEGGDLFDRIIAKG--YNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQ 181 (477)
Q Consensus 104 e~~~gg~L~~~l~~~~--~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~ 181 (477)
||++|++|.+++.... .+++.++..++.|++.||.|||++|++|+||+|+||++ +.++.++|+|||.+.......
T Consensus 79 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~l~~~nil~---~~~~~~~l~d~~~~~~~~~~~ 155 (256)
T cd08218 79 DYCEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFL---TKDGTIKLGDFGIARVLNSTV 155 (256)
T ss_pred ecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEE---cCCCCEEEeeccceeecCcch
Confidence 9999999999987643 57899999999999999999999999999999999999 677889999999987654332
Q ss_pred c-eecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCCCCHHHHHH
Q 042823 182 V-YRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDL 259 (477)
Q Consensus 182 ~-~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l 259 (477)
. .....|++.|+|||++.+ .++.++|+||+||++|+|++|..||...........+..+..... ...++.++.++
T Consensus 156 ~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l 232 (256)
T cd08218 156 ELARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNMKNLVLKIIRGSYPPV---SSHYSYDLRNL 232 (256)
T ss_pred hhhhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCHHHHHHHHhcCCCCCC---cccCCHHHHHH
Confidence 2 223468889999999864 578899999999999999999999988777777777766554322 23578999999
Q ss_pred HHHhcccCccccCCHHHHhcCccc
Q 042823 260 VRRMLTKDPKRRITAAQVLEHPWL 283 (477)
Q Consensus 260 i~~~l~~dp~~R~s~~~~l~h~~~ 283 (477)
|.+||+.+|++||++.++++||||
T Consensus 233 i~~~l~~~p~~Rp~~~~vl~~~~~ 256 (256)
T cd08218 233 VSQLFKRNPRDRPSVNSILEKNFI 256 (256)
T ss_pred HHHHhhCChhhCcCHHHHhhCcCC
Confidence 999999999999999999999997
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti |
| >cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-43 Score=337.70 Aligned_cols=262 Identities=27% Similarity=0.403 Sum_probs=213.4
Q ss_pred ccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeC--Ce
Q 042823 21 VMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDE--TA 98 (477)
Q Consensus 21 ~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~--~~ 98 (477)
..++|++.+.||+|+||.||+|.++.+|+.||+|++....... .......+|+.++.++ +||||+++++++... +.
T Consensus 5 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~ 82 (309)
T cd07845 5 SVTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERD-GIPISSLREITLLLNL-RHPNIVELKEVVVGKHLDS 82 (309)
T ss_pred cccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCC-CCcchhhHHHHHHHhC-CCCCCcceEEEEecCCCCe
Confidence 4678999999999999999999999999999999986543221 1223456799999999 799999999999755 56
Q ss_pred EEEEEeccCCCchHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCcccc
Q 042823 99 VHVVMELCEGGDLFDRIIA-KGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLF 177 (477)
Q Consensus 99 ~~lv~e~~~gg~L~~~l~~-~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~ 177 (477)
+|+||||+.+ +|.+++.. ...+++.++..++.||+.||.|||+.|++||||||+||++ +..+.+||+|||.+...
T Consensus 83 ~~lv~e~~~~-~l~~~l~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~---~~~~~~kL~dfg~~~~~ 158 (309)
T cd07845 83 IFLVMEYCEQ-DLASLLDNMPTPFSESQVKCLMLQLLRGLQYLHENFIIHRDLKVSNLLL---TDKGCLKIADFGLARTY 158 (309)
T ss_pred EEEEEecCCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE---CCCCCEEECccceeeec
Confidence 8999999975 88888776 3668999999999999999999999999999999999999 67789999999998766
Q ss_pred CCC-cceecccccccccchhhhhh--hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCcc-----------
Q 042823 178 EEG-QVYRDIVGSGFYIAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEID----------- 243 (477)
Q Consensus 178 ~~~-~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~----------- 243 (477)
... .......+++.|+|||++.+ .++.++||||+||++|+|++|.+||...+....+..+......
T Consensus 159 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (309)
T cd07845 159 GLPAKPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPNESIWPGFSD 238 (309)
T ss_pred CCccCCCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChhhchhhhc
Confidence 432 22233456788999999864 4789999999999999999999999888777666655442110
Q ss_pred --------CCCCC-------CCCCCHHHHHHHHHhcccCccccCCHHHHhcCcccCcCCC
Q 042823 244 --------FDTDP-------WPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGE 288 (477)
Q Consensus 244 --------~~~~~-------~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~~~ 288 (477)
..... .+..++.+.++|.+||+.||++|||+.++++||||+...-
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h~~f~~~~~ 298 (309)
T cd07845 239 LPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALESSYFKEKPL 298 (309)
T ss_pred ccccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhcChhhccCCC
Confidence 00000 1235888999999999999999999999999999986543
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing |
| >cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-42 Score=327.50 Aligned_cols=254 Identities=27% Similarity=0.466 Sum_probs=208.7
Q ss_pred cccccccccccCCeEEEEEEEccCCceEEEEEeecCCcc--chhhHHHHHHHHHHHHhccCCCCeeEEEEEEEe--CCeE
Q 042823 24 HYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKM--RLAENDMIRREIQIRLYLSGQPNVVEFKSTYED--ETAV 99 (477)
Q Consensus 24 ~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~--~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~--~~~~ 99 (477)
.|++.+.||+|+||.||+|.+..++..||+|.+...... .......+.+|+.++..+ +||||+++++++.. ...+
T Consensus 3 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~~ 81 (266)
T cd06651 3 NWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNL-QHERIVQYYGCLRDRAEKTL 81 (266)
T ss_pred CccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHc-CCCCeeeEEEEEEcCCCCEE
Confidence 689999999999999999999999999999988654321 223445688899999999 79999999999875 4678
Q ss_pred EEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCC
Q 042823 100 HVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEE 179 (477)
Q Consensus 100 ~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~ 179 (477)
++++||+++++|.+++...+.+++..+..++.|++.||.|||+.+++||||+|+||++ +.++.+||+|||++.....
T Consensus 82 ~l~~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~LH~~~i~H~~l~p~nil~---~~~~~~~l~dfg~~~~~~~ 158 (266)
T cd06651 82 TIFMEYMPGGSVKDQLKAYGALTESVTRKYTRQILEGMSYLHSNMIVHRDIKGANILR---DSAGNVKLGDFGASKRLQT 158 (266)
T ss_pred EEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEE---CCCCCEEEccCCCcccccc
Confidence 9999999999999999888889999999999999999999999999999999999998 6778899999999875432
Q ss_pred C----cceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCCCCH
Q 042823 180 G----QVYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISS 254 (477)
Q Consensus 180 ~----~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 254 (477)
. .......++..|+|||.+.+ .++.++||||+||++|+|++|.+||...........+..... .+.....+++
T Consensus 159 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 236 (266)
T cd06651 159 ICMSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAMAAIFKIATQPT--NPQLPSHISE 236 (266)
T ss_pred ccccCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccchHHHHHHHhcCCC--CCCCchhcCH
Confidence 1 11223458889999999865 478899999999999999999999976654444433332211 1111234688
Q ss_pred HHHHHHHHhcccCccccCCHHHHhcCcccC
Q 042823 255 TAKDLVRRMLTKDPKRRITAAQVLEHPWLR 284 (477)
Q Consensus 255 ~~~~li~~~l~~dp~~R~s~~~~l~h~~~~ 284 (477)
.+++++ +||..+|++||++.++++||||+
T Consensus 237 ~~~~li-~~~~~~p~~Rp~~~eil~hp~~~ 265 (266)
T cd06651 237 HARDFL-GCIFVEARHRPSAEELLRHPFAQ 265 (266)
T ss_pred HHHHHH-HHhcCChhhCcCHHHHhcCcccc
Confidence 899999 67778999999999999999985
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development |
| >cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-43 Score=333.37 Aligned_cols=252 Identities=30% Similarity=0.485 Sum_probs=206.2
Q ss_pred ccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeC--CeEEEE
Q 042823 25 YFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDE--TAVHVV 102 (477)
Q Consensus 25 Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~--~~~~lv 102 (477)
|++.+.||+|+||.||+|.++.+++.||+|++.+.... .......+|+.++.++.+||||+++++++.+. +.+++|
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~--~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv 78 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKS--LEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALV 78 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCC--chhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEE
Confidence 78899999999999999999999999999988654321 12223457888888887799999999999987 899999
Q ss_pred EeccCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCCCc
Q 042823 103 MELCEGGDLFDRIIAK-GYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQ 181 (477)
Q Consensus 103 ~e~~~gg~L~~~l~~~-~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~ 181 (477)
|||++| +|.+.+... ..+++..+..++.|++.||.|||+.|++||||+|+||++ +. +.+||+|||.+.......
T Consensus 79 ~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~p~ni~l---~~-~~~kl~dfg~~~~~~~~~ 153 (282)
T cd07831 79 FELMDM-NLYELIKGRKRPLPEKRVKSYMYQLLKSLDHMHRNGIFHRDIKPENILI---KD-DILKLADFGSCRGIYSKP 153 (282)
T ss_pred EecCCc-cHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEE---cC-CCeEEEecccccccccCC
Confidence 999975 888888764 568999999999999999999999999999999999998 45 899999999998765444
Q ss_pred ceecccccccccchhhhh--hhcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCC------------------
Q 042823 182 VYRDIVGSGFYIAPEVLR--RRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGE------------------ 241 (477)
Q Consensus 182 ~~~~~~gt~~y~aPE~~~--~~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~------------------ 241 (477)
......+++.|+|||++. +.++.++||||+||++|+|++|.+||.+.+..+....+....
T Consensus 154 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (282)
T cd07831 154 PYTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAEVLKKFRKSRHMN 233 (282)
T ss_pred CcCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHHHHHHHHHcCCCCHHHHHhhccccccc
Confidence 444557899999999864 346889999999999999999999998776554443332210
Q ss_pred ccCCCC-------CCCCCCHHHHHHHHHhcccCccccCCHHHHhcCccc
Q 042823 242 IDFDTD-------PWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWL 283 (477)
Q Consensus 242 ~~~~~~-------~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~ 283 (477)
..++.. ..+.+|..+.++|.+||+++|++|||+.++++||||
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~~~~ 282 (282)
T cd07831 234 YNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALRHPYF 282 (282)
T ss_pred ccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhhCCCC
Confidence 011110 013568999999999999999999999999999997
|
Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. |
| >cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-42 Score=327.08 Aligned_cols=254 Identities=27% Similarity=0.457 Sum_probs=214.0
Q ss_pred cccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEE
Q 042823 24 HYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVVM 103 (477)
Q Consensus 24 ~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~lv~ 103 (477)
+|.+.+.||+|+||.||+|.+..+++.||+|.+...... ......+.+|+.++..+ +||||+++++.+.....+++|+
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~~~~l-~~~~i~~~~~~~~~~~~~~lv~ 78 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDND-PKTIKEIADEMKVLELL-KHPNLVKYYGVEVHREKVYIFM 78 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccc-hHHHHHHHHHHHHHHhC-CCCChhheeeeEecCCEEEEEE
Confidence 689999999999999999999889999999998765432 34567889999999999 7999999999999999999999
Q ss_pred eccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCCCcc-
Q 042823 104 ELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQV- 182 (477)
Q Consensus 104 e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~- 182 (477)
||+++++|.+++.....+++..+..++.|++.||.|||+.|++|+||+|+||++ +..+.+||+|||.+........
T Consensus 79 e~~~~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~~~nil~---~~~~~~kl~d~g~~~~~~~~~~~ 155 (264)
T cd06626 79 EYCSGGTLEELLEHGRILDEHVIRVYTLQLLEGLAYLHSHGIVHRDIKPANIFL---DHNGVIKLGDFGCAVKLKNNTTT 155 (264)
T ss_pred ecCCCCcHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEE---CCCCCEEEcccccccccCCCCCc
Confidence 999999999999888788999999999999999999999999999999999999 6688899999999876543322
Q ss_pred ----eecccccccccchhhhhh-h---cCCccchHhHHHHHHHHhhCCCCCCCCChh-hHHHHHHcCCccCCCCCCCCCC
Q 042823 183 ----YRDIVGSGFYIAPEVLRR-R---YGKEIDIWSAGVILYILLSGVPPFWAETKK-GTYDAILQGEIDFDTDPWPSIS 253 (477)
Q Consensus 183 ----~~~~~gt~~y~aPE~~~~-~---~~~~~DiwslG~il~~l~tg~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~~ 253 (477)
.....+++.|+|||++.+ . ++.++||||+|+++|+|++|..||...... .....+..+ .....+.+..++
T Consensus 156 ~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 234 (264)
T cd06626 156 MGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEFQIMFHVGAG-HKPPIPDSLQLS 234 (264)
T ss_pred ccccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchHHHHHHHhcC-CCCCCCcccccC
Confidence 123467889999999864 2 788999999999999999999999765332 222223322 111222334568
Q ss_pred HHHHHHHHHhcccCccccCCHHHHhcCccc
Q 042823 254 STAKDLVRRMLTKDPKRRITAAQVLEHPWL 283 (477)
Q Consensus 254 ~~~~~li~~~l~~dp~~R~s~~~~l~h~~~ 283 (477)
+.+.++|.+||+.+|++|||+.+++.|||+
T Consensus 235 ~~~~~li~~~l~~~p~~R~~~~~i~~~~~~ 264 (264)
T cd06626 235 PEGKDFLDRCLESDPKKRPTASELLQHPFV 264 (264)
T ss_pred HHHHHHHHHHccCCcccCCCHHHHhcCCCC
Confidence 999999999999999999999999999996
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4 |
| >cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-43 Score=336.79 Aligned_cols=256 Identities=26% Similarity=0.457 Sum_probs=211.4
Q ss_pred ccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 042823 23 LHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVV 102 (477)
Q Consensus 23 ~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~lv 102 (477)
++|++.+.||+|+||.||+|.++.+++.||+|.+.+..... .....+.+|+.++..+ +||||+++++++..+...|+|
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~-~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv 78 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDK-MVKKIAMREIRMLKQL-RHENLVNLIEVFRRKKRLYLV 78 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcc-hhhHHHHHHHHHHHhc-CCcchhhHHHhcccCCeEEEE
Confidence 47899999999999999999999899999999886543322 2345677899999998 799999999999999999999
Q ss_pred EeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCCC-c
Q 042823 103 MELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEG-Q 181 (477)
Q Consensus 103 ~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~-~ 181 (477)
|||+++++|..+......+++.++..++.|++.||.|||+.|++||||+|+||++ ++++.++|+|||++...... .
T Consensus 79 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~h~~l~p~ni~~---~~~~~~~l~dfg~~~~~~~~~~ 155 (286)
T cd07846 79 FEFVDHTVLDDLEKYPNGLDESRVRKYLFQILRGIEFCHSHNIIHRDIKPENILV---SQSGVVKLCDFGFARTLAAPGE 155 (286)
T ss_pred EecCCccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEE---CCCCcEEEEeeeeeeeccCCcc
Confidence 9999998888777666678999999999999999999999999999999999999 77889999999998765432 2
Q ss_pred ceecccccccccchhhhhh--hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCc-----------------
Q 042823 182 VYRDIVGSGFYIAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEI----------------- 242 (477)
Q Consensus 182 ~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~----------------- 242 (477)
......++..|+|||++.+ .++.++||||+|+++|+|++|.+||...........+.....
T Consensus 156 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (286)
T cd07846 156 VYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQKNPLFA 235 (286)
T ss_pred ccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCCCchhhHHHhccchHhh
Confidence 2334568899999999864 478899999999999999999999976654333322221000
Q ss_pred --cCCC--------CCCCCCCHHHHHHHHHhcccCccccCCHHHHhcCccc
Q 042823 243 --DFDT--------DPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWL 283 (477)
Q Consensus 243 --~~~~--------~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~ 283 (477)
..+. ..++.++..+.+|+.+||..+|++||++.++++||||
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~~~~ 286 (286)
T cd07846 236 GMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLHHEFF 286 (286)
T ss_pred ccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhcCCCC
Confidence 0000 1134678999999999999999999999999999997
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI |
| >cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-43 Score=345.85 Aligned_cols=255 Identities=21% Similarity=0.296 Sum_probs=205.8
Q ss_pred cccccccccccccccccCCeEEEEEEEccCC-----ceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEE
Q 042823 18 YEDVMLHYFFGRMLGRGQFGVSYLCTENSTN-----RPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKST 92 (477)
Q Consensus 18 ~~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~-----~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~ 92 (477)
+.-..++|++++.||+|+||.||+|++..++ ..||+|++..... ......+.+|+.++..+.+||||++++++
T Consensus 33 ~~~~~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~il~~l~~h~nIv~~~~~ 110 (374)
T cd05106 33 WEFPRDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAH--TDEREALMSELKILSHLGQHKNIVNLLGA 110 (374)
T ss_pred ccccHHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCC--HHHHHHHHHHHHHHHhhccCCceeeEeeE
Confidence 3445668999999999999999999865443 5799999865432 23356688999999998779999999999
Q ss_pred EEeCCeEEEEEeccCCCchHHHHHHc------------------------------------------------------
Q 042823 93 YEDETAVHVVMELCEGGDLFDRIIAK------------------------------------------------------ 118 (477)
Q Consensus 93 ~~~~~~~~lv~e~~~gg~L~~~l~~~------------------------------------------------------ 118 (477)
+.....+|+|||||++|+|.+++...
T Consensus 111 ~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (374)
T cd05106 111 CTHGGPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSS 190 (374)
T ss_pred ecCCCCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCcccc
Confidence 99999999999999999999998642
Q ss_pred ----------------CCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCCCcc
Q 042823 119 ----------------GYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQV 182 (477)
Q Consensus 119 ----------------~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~ 182 (477)
.++++.++..++.||+.||.|||++||+||||||+||++ +..+.+||+|||++........
T Consensus 191 ~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~giiHrDLkp~Nil~---~~~~~~kL~DfGla~~~~~~~~ 267 (374)
T cd05106 191 SSQSSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKNCIHRDVAARNVLL---TDGRVAKICDFGLARDIMNDSN 267 (374)
T ss_pred ccccccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCCEEeccCchheEEE---eCCCeEEEeeceeeeeccCCcc
Confidence 136778899999999999999999999999999999999 6778899999999876533221
Q ss_pred e---ecccccccccchhhhh-hhcCCccchHhHHHHHHHHhh-CCCCCCCCChhhHHHHHHcCCccCCCCCCCCCCHHHH
Q 042823 183 Y---RDIVGSGFYIAPEVLR-RRYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAK 257 (477)
Q Consensus 183 ~---~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~l~t-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 257 (477)
. ....+++.|+|||++. +.++.++|||||||++|+|++ |..||..................... ...+|+++.
T Consensus 268 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~ 345 (374)
T cd05106 268 YVVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNSKFYKMVKRGYQMSR--PDFAPPEIY 345 (374)
T ss_pred eeeccCCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccHHHHHHHHcccCccC--CCCCCHHHH
Confidence 1 1223456799999985 468999999999999999997 99999876554444444433322221 234689999
Q ss_pred HHHHHhcccCccccCCHHHHhc
Q 042823 258 DLVRRMLTKDPKRRITAAQVLE 279 (477)
Q Consensus 258 ~li~~~l~~dp~~R~s~~~~l~ 279 (477)
+++.+||+.||.+|||+.++++
T Consensus 346 ~li~~cl~~dp~~RPs~~~l~~ 367 (374)
T cd05106 346 SIMKMCWNLEPTERPTFSQISQ 367 (374)
T ss_pred HHHHHHcCCChhhCcCHHHHHH
Confidence 9999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti |
| >cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-42 Score=325.40 Aligned_cols=254 Identities=28% Similarity=0.433 Sum_probs=214.9
Q ss_pred cccccccccccCCeEEEEEEEccCCceEEEEEeecCCcc--chhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEE
Q 042823 24 HYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKM--RLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHV 101 (477)
Q Consensus 24 ~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~--~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~l 101 (477)
+|+..+.||+|++|.||+|.+..++..|++|.+...... .......+.+|+.++..+ +||||+++++++.+...+|+
T Consensus 1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~l 79 (258)
T cd06632 1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKL-QHPNIVQYLGTEREEDNLYI 79 (258)
T ss_pred CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhc-CCCCchheeeeEecCCeEEE
Confidence 588899999999999999999889999999998654321 123446788999999999 79999999999999999999
Q ss_pred EEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCCCc
Q 042823 102 VMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQ 181 (477)
Q Consensus 102 v~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~ 181 (477)
|+||++|++|.+++.+.+.+++..+..++.|++.||.|||+.|++|+||+|+||++ +..+.+||+|||.+.......
T Consensus 80 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~~~ni~~---~~~~~~kl~d~~~~~~~~~~~ 156 (258)
T cd06632 80 FLELVPGGSLAKLLKKYGSFPEPVIRLYTRQILLGLEYLHDRNTVHRDIKGANILV---DTNGVVKLADFGMAKQVVEFS 156 (258)
T ss_pred EEEecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEE---CCCCCEEEccCccceeccccc
Confidence 99999999999999888889999999999999999999999999999999999999 677899999999887654443
Q ss_pred ceecccccccccchhhhhh-h-cCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCCCCHHHHHH
Q 042823 182 VYRDIVGSGFYIAPEVLRR-R-YGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDL 259 (477)
Q Consensus 182 ~~~~~~gt~~y~aPE~~~~-~-~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l 259 (477)
......|++.|+|||.+.. . ++.++|+||+||++|+|++|.+||...........+.... . .....+.+++.+.++
T Consensus 157 ~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~l 234 (258)
T cd06632 157 FAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGVAAVFKIGRSK-E-LPPIPDHLSDEAKDF 234 (258)
T ss_pred cccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHHHHHHHHHhcc-c-CCCcCCCcCHHHHHH
Confidence 3345678999999999864 3 7889999999999999999999997765444444433311 1 112234678999999
Q ss_pred HHHhcccCccccCCHHHHhcCccc
Q 042823 260 VRRMLTKDPKRRITAAQVLEHPWL 283 (477)
Q Consensus 260 i~~~l~~dp~~R~s~~~~l~h~~~ 283 (477)
+.+||+.+|.+||++.+++.|||+
T Consensus 235 i~~~l~~~p~~Rp~~~~~l~~~~~ 258 (258)
T cd06632 235 ILKCLQRDPSLRPTAAELLEHPFV 258 (258)
T ss_pred HHHHhhcCcccCcCHHHHhcCCCC
Confidence 999999999999999999999996
|
Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops |
| >cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-43 Score=335.44 Aligned_cols=266 Identities=28% Similarity=0.470 Sum_probs=221.1
Q ss_pred cccccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEe
Q 042823 16 KAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYED 95 (477)
Q Consensus 16 ~~~~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~ 95 (477)
.+...+.+.|.....||+|+||.||++.+..++..||+|.+.... ......+.+|+.++..+ +||||+++++.+..
T Consensus 15 ~~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~e~~~l~~l-~h~~ii~~~~~~~~ 90 (292)
T cd06658 15 VSPGDPREYLDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRK---QQRRELLFNEVVIMRDY-HHENVVDMYNSYLV 90 (292)
T ss_pred eccCchHHHHhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecch---HHHHHHHHHHHHHHHhC-CCCcHHHHHHheec
Confidence 355677778888889999999999999999999999999885432 23455688999999988 79999999999999
Q ss_pred CCeEEEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCcc
Q 042823 96 ETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSAL 175 (477)
Q Consensus 96 ~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~ 175 (477)
.+..|+||||++|++|.+++. .+.+++.++..++.||+.||.|||++|++||||||+||++ +.++.+||+|||++.
T Consensus 91 ~~~~~lv~e~~~~~~L~~~~~-~~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill---~~~~~~kL~dfg~~~ 166 (292)
T cd06658 91 GDELWVVMEFLEGGALTDIVT-HTRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILL---TSDGRIKLSDFGFCA 166 (292)
T ss_pred CCeEEEEEeCCCCCcHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEE---cCCCCEEEccCcchh
Confidence 999999999999999988774 4568999999999999999999999999999999999999 677889999999886
Q ss_pred ccCCC-cceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCCCC
Q 042823 176 LFEEG-QVYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSIS 253 (477)
Q Consensus 176 ~~~~~-~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 253 (477)
..... .......|++.|+|||.+.+ .++.++||||+|+++|+|++|..||...........+.... .........++
T Consensus 167 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 245 (292)
T cd06658 167 QVSKEVPKRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRDNL-PPRVKDSHKVS 245 (292)
T ss_pred hcccccccCceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcC-CCccccccccC
Confidence 54322 12234568999999999865 58899999999999999999999998776655554443322 11112223578
Q ss_pred HHHHHHHHHhcccCccccCCHHHHhcCcccCcCCCCC
Q 042823 254 STAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEAS 290 (477)
Q Consensus 254 ~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~~~~~ 290 (477)
..+.+++.+||..||.+|||+.++++||||+.....+
T Consensus 246 ~~~~~li~~~l~~~P~~Rpt~~~il~~~~~~~~~~~~ 282 (292)
T cd06658 246 SVLRGFLDLMLVREPSQRATAQELLQHPFLKLAGPPS 282 (292)
T ss_pred HHHHHHHHHHccCChhHCcCHHHHhhChhhhccCCcc
Confidence 8999999999999999999999999999998766554
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express |
| >cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-43 Score=345.65 Aligned_cols=255 Identities=23% Similarity=0.341 Sum_probs=205.3
Q ss_pred ccccccccccccccccCCeEEEEEEE-----ccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEE
Q 042823 19 EDVMLHYFFGRMLGRGQFGVSYLCTE-----NSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTY 93 (477)
Q Consensus 19 ~~~~~~Y~~~~~iG~G~~g~V~~~~~-----~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~ 93 (477)
....++|++.+.||+|+||.||+|.+ ..++..||+|++..... ......+.+|+.++..+.+||||+++++++
T Consensus 31 ~~~~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~--~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~ 108 (375)
T cd05104 31 EFPRNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAH--LTEREALMSELKVLSYLGNHINIVNLLGAC 108 (375)
T ss_pred ccchHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcC--cHHHHHHHHHHHHHHHhcCCcceeeeeeee
Confidence 34456899999999999999999974 35677899998864322 234567889999999997799999999999
Q ss_pred EeCCeEEEEEeccCCCchHHHHHHcC------------------------------------------------------
Q 042823 94 EDETAVHVVMELCEGGDLFDRIIAKG------------------------------------------------------ 119 (477)
Q Consensus 94 ~~~~~~~lv~e~~~gg~L~~~l~~~~------------------------------------------------------ 119 (477)
......|+|||||+||+|.+++....
T Consensus 109 ~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 188 (375)
T cd05104 109 TVGGPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRS 188 (375)
T ss_pred ccCCcceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccc
Confidence 99999999999999999999986532
Q ss_pred ---------------------CCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccC
Q 042823 120 ---------------------YNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFE 178 (477)
Q Consensus 120 ---------------------~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~ 178 (477)
.+++..+..++.||+.||.|||++||+||||||+||++ +....+||+|||++....
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nill---~~~~~~kl~DfG~a~~~~ 265 (375)
T cd05104 189 VRSGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKNCIHRDLAARNILL---THGRITKICDFGLARDIR 265 (375)
T ss_pred cccceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCchhhEEE---ECCCcEEEecCccceecc
Confidence 36778889999999999999999999999999999999 567789999999987654
Q ss_pred CCcce---ecccccccccchhhhhh-hcCCccchHhHHHHHHHHhh-CCCCCCCCChhhHHHHHHcCCccCCCCCCCCCC
Q 042823 179 EGQVY---RDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQGEIDFDTDPWPSIS 253 (477)
Q Consensus 179 ~~~~~---~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~t-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 253 (477)
..... ....++..|+|||++.+ .++.++|||||||++|+|++ |.+||.................... .....+
T Consensus 266 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 343 (375)
T cd05104 266 NDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDSKFYKMIKEGYRML--SPECAP 343 (375)
T ss_pred CcccccccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchHHHHHHHHhCccCC--CCCCCC
Confidence 32211 12234567999999864 68999999999999999998 8999977654444333333322221 123468
Q ss_pred HHHHHHHHHhcccCccccCCHHHHhcC
Q 042823 254 STAKDLVRRMLTKDPKRRITAAQVLEH 280 (477)
Q Consensus 254 ~~~~~li~~~l~~dp~~R~s~~~~l~h 280 (477)
.++++|+.+||+.||++|||+.++++.
T Consensus 344 ~~l~~li~~cl~~dP~~RPs~~eil~~ 370 (375)
T cd05104 344 SEMYDIMKSCWDADPLKRPTFKQIVQL 370 (375)
T ss_pred HHHHHHHHHHccCChhHCcCHHHHHHH
Confidence 899999999999999999999999863
|
Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce |
| >cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-42 Score=326.28 Aligned_cols=255 Identities=26% Similarity=0.470 Sum_probs=210.6
Q ss_pred ccccccccccccCCeEEEEEEEccCCceEEEEEeecCCcc--chhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeC--Ce
Q 042823 23 LHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKM--RLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDE--TA 98 (477)
Q Consensus 23 ~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~--~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~--~~ 98 (477)
..|++.+.||+|+||.||.|.+..++..||+|.+...... .......+.+|+.++..+ +||||+++++++.+. ..
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~ 80 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNL-LHERIVQYYGCLRDPMERT 80 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhc-CCCCeeeEEeEeccCCCce
Confidence 4799999999999999999999999999999988643221 223456788999999999 799999999998763 57
Q ss_pred EEEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccC
Q 042823 99 VHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFE 178 (477)
Q Consensus 99 ~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~ 178 (477)
+|+||||++|++|.+++.+.+.+++..+..++.|++.||.|||+++++||||||+||++ +.++.++|+|||.+....
T Consensus 81 ~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~---~~~~~~~l~Dfg~~~~~~ 157 (265)
T cd06652 81 LSIFMEHMPGGSIKDQLKSYGALTENVTRKYTRQILEGVSYLHSNMIVHRDIKGANILR---DSVGNVKLGDFGASKRLQ 157 (265)
T ss_pred EEEEEEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEe---cCCCCEEECcCccccccc
Confidence 88999999999999999888888999999999999999999999999999999999998 677889999999887543
Q ss_pred CC----cceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCCCC
Q 042823 179 EG----QVYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSIS 253 (477)
Q Consensus 179 ~~----~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 253 (477)
.. .......|+..|+|||++.+ .++.++|||||||++|+|++|..||...........+..... .....+.++
T Consensus 158 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 235 (265)
T cd06652 158 TICLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAMAAIFKIATQPT--NPVLPPHVS 235 (265)
T ss_pred cccccccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccchHHHHHHHhcCCC--CCCCchhhC
Confidence 21 11233468889999999864 578899999999999999999999977654444444332211 111224578
Q ss_pred HHHHHHHHHhcccCccccCCHHHHhcCcccC
Q 042823 254 STAKDLVRRMLTKDPKRRITAAQVLEHPWLR 284 (477)
Q Consensus 254 ~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~ 284 (477)
..+.++|.+||. +|++||+++++++|||+.
T Consensus 236 ~~~~~~i~~~l~-~p~~Rp~~~~il~~~~~~ 265 (265)
T cd06652 236 DHCRDFLKRIFV-EAKLRPSADELLRHTFVH 265 (265)
T ss_pred HHHHHHHHHHhc-ChhhCCCHHHHhcCcccC
Confidence 889999999995 999999999999999974
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re |
| >cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-43 Score=334.82 Aligned_cols=256 Identities=28% Similarity=0.417 Sum_probs=210.1
Q ss_pred cccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeC--CeE
Q 042823 22 MLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDE--TAV 99 (477)
Q Consensus 22 ~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~--~~~ 99 (477)
.+.|++.+.||+|+||.||+|.++.+++.+|+|.+...... ......+.+|+.++.++ +||||+++++++... ...
T Consensus 4 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l-~h~ni~~~~~~~~~~~~~~~ 81 (293)
T cd07843 4 VDEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEK-EGFPITSLREINILLKL-QHPNIVTVKEVVVGSNLDKI 81 (293)
T ss_pred hhhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeecccc-ccchhhHHHHHHHHHhc-CCCCEEEEEEEEEecCCCcE
Confidence 35799999999999999999999999999999998654322 22234566899999999 699999999999877 899
Q ss_pred EEEEeccCCCchHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccC
Q 042823 100 HVVMELCEGGDLFDRIIAKG-YNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFE 178 (477)
Q Consensus 100 ~lv~e~~~gg~L~~~l~~~~-~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~ 178 (477)
|+||||+++ +|.+++.... .+++.++..++.|++.||.|||++|++||||||+||++ +.++.+||+|||++....
T Consensus 82 ~lv~e~~~~-~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili---~~~~~~~l~d~g~~~~~~ 157 (293)
T cd07843 82 YMVMEYVEH-DLKSLMETMKQPFLQSEVKCLMLQLLSGVAHLHDNWILHRDLKTSNLLL---NNRGILKICDFGLAREYG 157 (293)
T ss_pred EEEehhcCc-CHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEE---CCCCcEEEeecCceeecc
Confidence 999999975 9988887644 58999999999999999999999999999999999999 677899999999887664
Q ss_pred CC-cceecccccccccchhhhhh--hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCcc------------
Q 042823 179 EG-QVYRDIVGSGFYIAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEID------------ 243 (477)
Q Consensus 179 ~~-~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~------------ 243 (477)
.. .......+++.|+|||.+.+ .++.++|+||+|+++|+|++|.+||...........+......
T Consensus 158 ~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (293)
T cd07843 158 SPLKPYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWPGFSEL 237 (293)
T ss_pred CCccccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhcc
Confidence 43 23344567899999999864 3688999999999999999999999877665554443321100
Q ss_pred --------------CCCCCCCC--CCHHHHHHHHHhcccCccccCCHHHHhcCccc
Q 042823 244 --------------FDTDPWPS--ISSTAKDLVRRMLTKDPKRRITAAQVLEHPWL 283 (477)
Q Consensus 244 --------------~~~~~~~~--~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~ 283 (477)
.....++. +++.+.++|++||+.+|++|||+.++++||||
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~~~~f 293 (293)
T cd07843 238 PGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALKHPYF 293 (293)
T ss_pred chhcccccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhcCCCC
Confidence 00011222 48899999999999999999999999999997
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the |
| >cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-42 Score=328.74 Aligned_cols=249 Identities=29% Similarity=0.442 Sum_probs=201.3
Q ss_pred cccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHH---HHHhccCCCCeeEEEEEEEeCCeEEEEEecc
Q 042823 30 MLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQ---IRLYLSGQPNVVEFKSTYEDETAVHVVMELC 106 (477)
Q Consensus 30 ~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~---~~~~l~~hpniv~~~~~~~~~~~~~lv~e~~ 106 (477)
.||+|+||.||+|.+..+++.||+|.+.+..............|.. .+... +||+|+++++++.....+|+||||+
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~v~e~~ 79 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTG-DCPFIVCMSYAFHTPDKLSFILDLM 79 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhC-CCCcEeeeeeeeecCCEEEEEEecC
Confidence 4899999999999999999999999987653222121222233333 22333 7999999999999999999999999
Q ss_pred CCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCCCcceecc
Q 042823 107 EGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDI 186 (477)
Q Consensus 107 ~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~ 186 (477)
+||+|.+++...+.+++..+..++.|++.||.|||+.+++||||||+||++ +.++.+||+|||++....... ....
T Consensus 80 ~g~~L~~~l~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~nili---~~~~~~kl~dfg~~~~~~~~~-~~~~ 155 (278)
T cd05606 80 NGGDLHYHLSQHGVFSEAEMRFYAAEIILGLEHMHNRFVVYRDLKPANILL---DEHGHVRISDLGLACDFSKKK-PHAS 155 (278)
T ss_pred CCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCCCCHHHEEE---CCCCCEEEccCcCccccCccC-CcCc
Confidence 999999999888889999999999999999999999999999999999999 677889999999987654322 2345
Q ss_pred cccccccchhhhhh--hcCCccchHhHHHHHHHHhhCCCCCCCCChh---hHHHHHHcCCccCCCCCCCCCCHHHHHHHH
Q 042823 187 VGSGFYIAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPFWAETKK---GTYDAILQGEIDFDTDPWPSISSTAKDLVR 261 (477)
Q Consensus 187 ~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~l~tg~~pf~~~~~~---~~~~~i~~~~~~~~~~~~~~~~~~~~~li~ 261 (477)
.|++.|+|||++.+ .++.++||||+||++|+|++|..||...... .......... ...+..+|+.+.+++.
T Consensus 156 ~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~----~~~~~~~s~~~~~li~ 231 (278)
T cd05606 156 VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMA----VELPDSFSPELRSLLE 231 (278)
T ss_pred CCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHHHHHhhccC----CCCCCcCCHHHHHHHH
Confidence 78999999999863 4889999999999999999999999765322 2222222211 1222357899999999
Q ss_pred HhcccCccccC-----CHHHHhcCcccCcCC
Q 042823 262 RMLTKDPKRRI-----TAAQVLEHPWLRESG 287 (477)
Q Consensus 262 ~~l~~dp~~R~-----s~~~~l~h~~~~~~~ 287 (477)
+||..+|.+|| ++.++++||||+...
T Consensus 232 ~~l~~~p~~R~~~~~~~~~~ll~~~~~~~~~ 262 (278)
T cd05606 232 GLLQRDVNRRLGCLGRGAQEVKEHPFFRSLD 262 (278)
T ss_pred HHhhcCHHhccCCCCCCHHHHHhCccccCCC
Confidence 99999999999 999999999998753
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co |
| >cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-43 Score=338.34 Aligned_cols=249 Identities=29% Similarity=0.454 Sum_probs=191.6
Q ss_pred cccccccCCeEEEEEEEcc--CCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEE--eCCeEEEEE
Q 042823 28 GRMLGRGQFGVSYLCTENS--TNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYE--DETAVHVVM 103 (477)
Q Consensus 28 ~~~iG~G~~g~V~~~~~~~--~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~--~~~~~~lv~ 103 (477)
+.+||+|+||.||+|.++. ++..||+|.+.... ....+.+|+.++..+ +||||+++++++. .+..+|+||
T Consensus 6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~-----~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~lv~ 79 (317)
T cd07867 6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTG-----ISMSACREIALLREL-KHPNVIALQKVFLSHSDRKVWLLF 79 (317)
T ss_pred ceEeccCCCeeEEEEEecCCCccceEEEEEecCCC-----CcHHHHHHHHHHHhC-CCCCeeeEEEEEeccCCCeEEEEE
Confidence 4689999999999999754 56889999886432 123467899999999 7999999999985 456789999
Q ss_pred eccCCCchHHHHHHc---------CCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeec-CCCCCEEEeecCC
Q 042823 104 ELCEGGDLFDRIIAK---------GYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISR-DDNALLKVTDFGS 173 (477)
Q Consensus 104 e~~~gg~L~~~l~~~---------~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~-~~~~~~kl~Dfg~ 173 (477)
||+.+ +|.+++... ..+++..+..++.||+.||.|||+.||+||||||+||++... +..+.+||+|||+
T Consensus 80 e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~ 158 (317)
T cd07867 80 DYAEH-DLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGF 158 (317)
T ss_pred eeeCC-cHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEccCCCCCCcEEEeeccc
Confidence 99965 888877531 247889999999999999999999999999999999998543 3457899999999
Q ss_pred ccccCCCc----ceecccccccccchhhhhh--hcCCccchHhHHHHHHHHhhCCCCCCCCChh---------hHHHHHH
Q 042823 174 ALLFEEGQ----VYRDIVGSGFYIAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPFWAETKK---------GTYDAIL 238 (477)
Q Consensus 174 a~~~~~~~----~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~l~tg~~pf~~~~~~---------~~~~~i~ 238 (477)
+....... ......||+.|+|||++.+ .++.++||||+||++|+|+||.+||...... .....+.
T Consensus 159 a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~ 238 (317)
T cd07867 159 ARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPFHHDQLDRIF 238 (317)
T ss_pred eeccCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcccccccccccccccHHHHHHHH
Confidence 97654321 1234578999999999864 4789999999999999999999999654321 0011110
Q ss_pred cC--------------CccC------------C--------CCCCCCCCHHHHHHHHHhcccCccccCCHHHHhcCccc
Q 042823 239 QG--------------EIDF------------D--------TDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWL 283 (477)
Q Consensus 239 ~~--------------~~~~------------~--------~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~ 283 (477)
.. ...+ . .......+..+.++|.+||+.||.+|||+.|+|+||||
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~R~t~~e~l~hp~f 317 (317)
T cd07867 239 SVMGFPADKDWEDIRKMPEYPTLQKDFRRTTYANSSLIKYMEKHKVKPDSKVFLLLQKLLTMDPTKRITSEQALQDPYF 317 (317)
T ss_pred HhcCCCChhhhhhhhhcccchhhhhhhcccccCCchhhhhhhcccCCCChHHHHHHHHHhccCcccccCHHHHhcCCCC
Confidence 00 0000 0 00011245678899999999999999999999999997
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as |
| >cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-43 Score=329.19 Aligned_cols=255 Identities=27% Similarity=0.396 Sum_probs=212.8
Q ss_pred ccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 042823 23 LHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVV 102 (477)
Q Consensus 23 ~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~lv 102 (477)
++|++.+.||+|+||.||+|.++.+++.+|+|.+..... ......+.+|+.+++.+ .||||+++++.+.....+|+|
T Consensus 1 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~--~~~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~~~~~~lv 77 (265)
T cd06605 1 DDLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEIN--EAIQKQILRELDILHKC-NSPYIVGFYGAFYNNGDISIC 77 (265)
T ss_pred CcchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccC--hHHHHHHHHHHHHHHHC-CCCchhhhheeeecCCEEEEE
Confidence 368899999999999999999999999999999876432 24456788899999999 599999999999999999999
Q ss_pred EeccCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHH-cCCeeccCCCCceeeeecCCCCCEEEeecCCccccCCC
Q 042823 103 MELCEGGDLFDRIIAK-GYNSERDAATVLRAIVNAVNVCHS-MGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEG 180 (477)
Q Consensus 103 ~e~~~gg~L~~~l~~~-~~~~~~~~~~i~~qil~~L~~lH~-~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~ 180 (477)
+||++|++|.+++... ..+++..+..++.|++.||.|||+ .|++||||||+||++ +..+.++|+|||.+......
T Consensus 78 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~i~H~dl~~~ni~~---~~~~~~~l~d~g~~~~~~~~ 154 (265)
T cd06605 78 MEYMDGGSLDKILKEVQGRIPERILGKIAVAVLKGLTYLHEKHKIIHRDVKPSNILV---NSRGQIKLCDFGVSGQLVNS 154 (265)
T ss_pred EEecCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHcCCCCeecCCCCHHHEEE---CCCCCEEEeecccchhhHHH
Confidence 9999999999999876 788999999999999999999999 999999999999999 66788999999988765332
Q ss_pred cceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCC-----hhhHHHHHHcCCccCCCCCCCCCCH
Q 042823 181 QVYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAET-----KKGTYDAILQGEIDFDTDPWPSISS 254 (477)
Q Consensus 181 ~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~-----~~~~~~~i~~~~~~~~~~~~~~~~~ 254 (477)
.. ....++..|+|||.+.+ .++.++||||+|+++|+|++|..||.... .......+...... ..+...+++
T Consensus 155 ~~-~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 231 (265)
T cd06605 155 LA-KTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYIVNEPPP--RLPSGKFSP 231 (265)
T ss_pred Hh-hcccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHHHHhcCCCC--CCChhhcCH
Confidence 22 12678899999999865 58899999999999999999999996542 12222333332211 111112789
Q ss_pred HHHHHHHHhcccCccccCCHHHHhcCcccCcC
Q 042823 255 TAKDLVRRMLTKDPKRRITAAQVLEHPWLRES 286 (477)
Q Consensus 255 ~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~ 286 (477)
+++++|.+||..+|++|||+.+++.||||+..
T Consensus 232 ~~~~li~~~l~~~p~~Rpt~~~ll~~~~~~~~ 263 (265)
T cd06605 232 DFQDFVNLCLIKDPRERPSYKELLEHPFIKKY 263 (265)
T ss_pred HHHHHHHHHcCCCchhCcCHHHHhhCchhhcc
Confidence 99999999999999999999999999999754
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity |
| >cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-43 Score=332.48 Aligned_cols=259 Identities=23% Similarity=0.321 Sum_probs=208.6
Q ss_pred ccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 042823 23 LHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVV 102 (477)
Q Consensus 23 ~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~lv 102 (477)
++|...+.||+|+||.||++.+..+++.+|+|.+...... .....+.+|+.++.++.+||||+++++++..+...+++
T Consensus 4 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~--~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~ 81 (288)
T cd06616 4 EDLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDE--KEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWIC 81 (288)
T ss_pred HHhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccCh--HHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEE
Confidence 4677889999999999999999999999999998654322 34567888999999996799999999999999999999
Q ss_pred EeccCCCchHHHH---H--HcCCCCHHHHHHHHHHHHHHHHHHHHc-CCeeccCCCCceeeeecCCCCCEEEeecCCccc
Q 042823 103 MELCEGGDLFDRI---I--AKGYNSERDAATVLRAIVNAVNVCHSM-GVMHRDLKPENFSFISRDDNALLKVTDFGSALL 176 (477)
Q Consensus 103 ~e~~~gg~L~~~l---~--~~~~~~~~~~~~i~~qil~~L~~lH~~-~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~ 176 (477)
|||+.+ +|.++. . ....+++..+..++.|++.||+|||+. +++||||||+||++ +..+.+||+|||++..
T Consensus 82 ~e~~~~-~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~---~~~~~~kl~dfg~~~~ 157 (288)
T cd06616 82 MELMDI-SLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELKIIHRDVKPSNILL---DRNGNIKLCDFGISGQ 157 (288)
T ss_pred EecccC-CHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCCeeccCCCHHHEEE---ccCCcEEEeecchhHH
Confidence 999965 554432 2 246789999999999999999999985 99999999999999 6678899999999876
Q ss_pred cCCCcceecccccccccchhhhhh----hcCCccchHhHHHHHHHHhhCCCCCCCCCh-hhHHHHHHcCCc-cCCCCCCC
Q 042823 177 FEEGQVYRDIVGSGFYIAPEVLRR----RYGKEIDIWSAGVILYILLSGVPPFWAETK-KGTYDAILQGEI-DFDTDPWP 250 (477)
Q Consensus 177 ~~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~DiwslG~il~~l~tg~~pf~~~~~-~~~~~~i~~~~~-~~~~~~~~ 250 (477)
...........|++.|+|||++.+ .++.++||||+||++|+|++|.+||..... ......+..+.. ......+.
T Consensus 158 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (288)
T cd06616 158 LVDSIAKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNSVFDQLTQVVKGDPPILSNSEER 237 (288)
T ss_pred hccCCccccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcchHHHHHhhhcCCCCCcCCCcCCC
Confidence 544333344568899999999864 478999999999999999999999965442 112222222221 12222234
Q ss_pred CCCHHHHHHHHHhcccCccccCCHHHHhcCcccCcCC
Q 042823 251 SISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESG 287 (477)
Q Consensus 251 ~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~~ 287 (477)
.++.++.+|+.+||+.+|++|||+.++++||||+...
T Consensus 238 ~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~~~~~~~~ 274 (288)
T cd06616 238 EFSPSFVNFINLCLIKDESKRPKYKELLEHPFIKDYE 274 (288)
T ss_pred ccCHHHHHHHHHHccCChhhCcCHHHHhcChhhhchh
Confidence 5889999999999999999999999999999997643
|
Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates |
| >PHA03211 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-43 Score=350.17 Aligned_cols=250 Identities=23% Similarity=0.331 Sum_probs=202.7
Q ss_pred cccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEE
Q 042823 22 MLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHV 101 (477)
Q Consensus 22 ~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~l 101 (477)
...|.+.+.||+|+||.||+|.+..+++.||+|.... ....+|+++++++ +|||||++++++...+..++
T Consensus 168 ~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~---------~~~~~E~~iL~~L-~HpnIv~l~~~~~~~~~~~l 237 (461)
T PHA03211 168 GLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGWY---------ASSVHEARLLRRL-SHPAVLALLDVRVVGGLTCL 237 (461)
T ss_pred cCCeEEEEEEccCCCeEEEEEEECCCCCEEEEecccc---------cCHHHHHHHHHHC-CCCCCCcEEEEEEECCEEEE
Confidence 4479999999999999999999999999999996421 2346799999999 79999999999999999999
Q ss_pred EEeccCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCCC
Q 042823 102 VMELCEGGDLFDRIIAK-GYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEG 180 (477)
Q Consensus 102 v~e~~~gg~L~~~l~~~-~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~ 180 (477)
|||++. ++|.+++... ..+++.++..++.|++.||.|||++||+||||||+|||+ +..+.+||+|||++......
T Consensus 238 v~e~~~-~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDLKP~NILl---~~~~~vkL~DFGla~~~~~~ 313 (461)
T PHA03211 238 VLPKYR-SDLYTYLGARLRPLGLAQVTAVARQLLSAIDYIHGEGIIHRDIKTENVLV---NGPEDICLGDFGAACFARGS 313 (461)
T ss_pred EEEccC-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECcCCHHHEEE---CCCCCEEEcccCCceecccc
Confidence 999995 5898888764 468999999999999999999999999999999999999 67788999999999765332
Q ss_pred c---ceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCC--------hhhHHHHHHcCCcc-----
Q 042823 181 Q---VYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAET--------KKGTYDAILQGEID----- 243 (477)
Q Consensus 181 ~---~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~--------~~~~~~~i~~~~~~----- 243 (477)
. ......||+.|+|||++.+ .++.++|||||||++|+|++|..|+.... .......+......
T Consensus 314 ~~~~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~ 393 (461)
T PHA03211 314 WSTPFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVDEFP 393 (461)
T ss_pred cccccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhccccccCC
Confidence 1 1224579999999999875 58999999999999999999877654322 12222222221111
Q ss_pred ----------------------CCCCCCC---CCCHHHHHHHHHhcccCccccCCHHHHhcCcccCc
Q 042823 244 ----------------------FDTDPWP---SISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRE 285 (477)
Q Consensus 244 ----------------------~~~~~~~---~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~ 285 (477)
+....|. .++.++.+||.+||+.||.+|||+.|+|+||||+.
T Consensus 394 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~hp~f~~ 460 (461)
T PHA03211 394 QHAGSRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLRLPLFQS 460 (461)
T ss_pred CCcchHHHHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhhCcccCC
Confidence 0111122 35678999999999999999999999999999964
|
|
| >cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-42 Score=325.14 Aligned_cols=252 Identities=30% Similarity=0.494 Sum_probs=215.3
Q ss_pred cccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEe--CCeEEE
Q 042823 24 HYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYED--ETAVHV 101 (477)
Q Consensus 24 ~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~--~~~~~l 101 (477)
+|++.+.||.|+||.||+|.+..+++.||+|++..... .......+.+|+.+++.+ +||||+++++++.. ....|+
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~~~~ 78 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNM-TEKEKQQLVSEVNILREL-KHPNIVRYYDRIIDRSNQTLYI 78 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccC-CHHHHHHHHHHHHHHHhc-CCCccceeeeeeecCCCCEEEE
Confidence 58899999999999999999999999999998865432 334556788899999999 79999999998753 456899
Q ss_pred EEeccCCCchHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHH-----HcCCeeccCCCCceeeeecCCCCCEEEeecC
Q 042823 102 VMELCEGGDLFDRIIA----KGYNSERDAATVLRAIVNAVNVCH-----SMGVMHRDLKPENFSFISRDDNALLKVTDFG 172 (477)
Q Consensus 102 v~e~~~gg~L~~~l~~----~~~~~~~~~~~i~~qil~~L~~lH-----~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg 172 (477)
+|||+++++|.+++.. ...+++..+..++.||+.||.||| +.+++||||+|+||++ +..+.+||+|||
T Consensus 79 ~~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili---~~~~~~kl~d~g 155 (265)
T cd08217 79 VMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFL---DANNNVKLGDFG 155 (265)
T ss_pred EehhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEE---ecCCCEEEeccc
Confidence 9999999999999876 357899999999999999999999 8999999999999999 677899999999
Q ss_pred CccccCCCcc-eecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCC
Q 042823 173 SALLFEEGQV-YRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWP 250 (477)
Q Consensus 173 ~a~~~~~~~~-~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~ 250 (477)
++........ .....|++.|+|||++.+ .++.++|+||||+++|+|++|..||...........+..+.... ..+
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~---~~~ 232 (265)
T cd08217 156 LAKILGHDSSFAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQLQLASKIKEGKFRR---IPY 232 (265)
T ss_pred ccccccCCcccccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcCHHHHHHHHhcCCCCC---Ccc
Confidence 9887654433 344578999999999864 57889999999999999999999998877666666665554321 123
Q ss_pred CCCHHHHHHHHHhcccCccccCCHHHHhcCccc
Q 042823 251 SISSTAKDLVRRMLTKDPKRRITAAQVLEHPWL 283 (477)
Q Consensus 251 ~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~ 283 (477)
.++..+.+++.+||+.+|++|||+.++++|||+
T Consensus 233 ~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~~~~ 265 (265)
T cd08217 233 RYSSELNEVIKSMLNVDPDKRPSTEELLQLPLI 265 (265)
T ss_pred ccCHHHHHHHHHHccCCcccCCCHHHHhhCCCC
Confidence 678999999999999999999999999999996
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi |
| >cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.7e-43 Score=342.66 Aligned_cols=261 Identities=25% Similarity=0.409 Sum_probs=210.7
Q ss_pred ccccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeC
Q 042823 17 AYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDE 96 (477)
Q Consensus 17 ~~~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~ 96 (477)
....+.++|++.+.||+|+||.||+|.+..+++.||+|++.+... .......+.+|+.++..+ +||||++++++|...
T Consensus 10 ~~~~~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~ 87 (353)
T cd07850 10 STFTVLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQ-NVTHAKRAYRELVLMKLV-NHKNIIGLLNVFTPQ 87 (353)
T ss_pred hhhhhhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCcccc-ChhHHHHHHHHHHHHHhc-CCCCCcceeeeeccC
Confidence 334577899999999999999999999999999999998864322 223445677899999998 799999999998644
Q ss_pred ------CeEEEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEee
Q 042823 97 ------TAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTD 170 (477)
Q Consensus 97 ------~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~D 170 (477)
...|+||||+.+ +|.+.+... +++..+..++.|++.||.|||++|++||||||+||++ +.++.+||+|
T Consensus 88 ~~~~~~~~~~lv~e~~~~-~l~~~~~~~--l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nil~---~~~~~~kL~D 161 (353)
T cd07850 88 KSLEEFQDVYLVMELMDA-NLCQVIQMD--LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV---KSDCTLKILD 161 (353)
T ss_pred CCccccCcEEEEEeccCC-CHHHHHhhc--CCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEE---CCCCCEEEcc
Confidence 357999999965 888887654 8999999999999999999999999999999999999 7788999999
Q ss_pred cCCccccCCCcceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCC--------
Q 042823 171 FGSALLFEEGQVYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGE-------- 241 (477)
Q Consensus 171 fg~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~-------- 241 (477)
||++.............+++.|+|||++.+ .++.++|||||||++|+|++|..||...+....+..+....
T Consensus 162 fg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 241 (353)
T cd07850 162 FGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSDEFM 241 (353)
T ss_pred CccceeCCCCCCCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCHHHH
Confidence 999987654433344578999999999865 58999999999999999999999998765444333332110
Q ss_pred --------------ccC---------CCCC--------CCCCCHHHHHHHHHhcccCccccCCHHHHhcCcccCc
Q 042823 242 --------------IDF---------DTDP--------WPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRE 285 (477)
Q Consensus 242 --------------~~~---------~~~~--------~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~ 285 (477)
... +... ....++.++++|.+||+.||++|||+.++|+||||+.
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~~~~~~ 316 (353)
T cd07850 242 SRLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQHPYINV 316 (353)
T ss_pred HHhhhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhcChhHhh
Confidence 000 0000 1134667899999999999999999999999999864
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK |
| >PRK13184 pknD serine/threonine-protein kinase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-42 Score=362.44 Aligned_cols=253 Identities=26% Similarity=0.344 Sum_probs=205.5
Q ss_pred ccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 042823 23 LHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVV 102 (477)
Q Consensus 23 ~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~lv 102 (477)
++|++++.||+|+||.||+|.+..+++.||+|++.............+.+|++++..+ +||||+++++++.+++..|+|
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L-~HPNIVkl~~v~~d~~~lyLV 80 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADL-IHPGIVPVYSICSDGDPVYYT 80 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhC-CCcCcCeEEEEEeeCCEEEEE
Confidence 6899999999999999999999999999999999765443344456788999999999 799999999999999999999
Q ss_pred EeccCCCchHHHHHHc-----------CCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeec
Q 042823 103 MELCEGGDLFDRIIAK-----------GYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDF 171 (477)
Q Consensus 103 ~e~~~gg~L~~~l~~~-----------~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Df 171 (477)
|||++||+|.+++... ...+...+..++.||+.||.|||++||+||||||+||++ +..+.+||+||
T Consensus 81 MEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~GIIHRDLKPeNILL---d~dg~vKLiDF 157 (932)
T PRK13184 81 MPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKGVLHRDLKPDNILL---GLFGEVVILDW 157 (932)
T ss_pred EEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCCccccCCchheEEE---cCCCCEEEEec
Confidence 9999999999988642 234556778899999999999999999999999999999 77788999999
Q ss_pred CCccccCCC-------------------cceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChh
Q 042823 172 GSALLFEEG-------------------QVYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKK 231 (477)
Q Consensus 172 g~a~~~~~~-------------------~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~ 231 (477)
|++...... ......+||+.|+|||++.+ .++.++||||+||++|+|+||.+||......
T Consensus 158 GLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~ 237 (932)
T PRK13184 158 GAAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKKGR 237 (932)
T ss_pred CcceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcchh
Confidence 998765110 00112469999999999865 5889999999999999999999999775443
Q ss_pred hHHHHHHcCCccCCCCCCCCCCHHHHHHHHHhcccCccccCCHHHHhcC
Q 042823 232 GTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEH 280 (477)
Q Consensus 232 ~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h 280 (477)
......... .+....++..+|+.+.+++.+||+.||++||+..+.+.+
T Consensus 238 ki~~~~~i~-~P~~~~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~ 285 (932)
T PRK13184 238 KISYRDVIL-SPIEVAPYREIPPFLSQIAMKALAVDPAERYSSVQELKQ 285 (932)
T ss_pred hhhhhhhcc-ChhhccccccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 332221111 111112335688999999999999999999987776643
|
|
| >cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-42 Score=326.26 Aligned_cols=256 Identities=27% Similarity=0.476 Sum_probs=213.3
Q ss_pred cccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhcc--CCCCeeEEEEEEEeCCeEEE
Q 042823 24 HYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLS--GQPNVVEFKSTYEDETAVHV 101 (477)
Q Consensus 24 ~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~--~hpniv~~~~~~~~~~~~~l 101 (477)
.|++.+.||+|+||.||+|.+..+++.||+|.+..... ......+.+|+.+++.+. .|||++++++++..+...|+
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~l 79 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTP--DDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWI 79 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCC--chhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEE
Confidence 58889999999999999999999999999999865322 233456788999988885 49999999999999999999
Q ss_pred EEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCCCc
Q 042823 102 VMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQ 181 (477)
Q Consensus 102 v~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~ 181 (477)
||||++|++|.+++.. +.+++..+..++.|++.||.|||+.|++||||+|+||++ +..+.++|+|||.+.......
T Consensus 80 v~e~~~~~~L~~~~~~-~~l~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~p~ni~i---~~~~~~~l~dfg~~~~~~~~~ 155 (277)
T cd06917 80 IMEYAEGGSVRTLMKA-GPIAEKYISVIIREVLVALKYIHKVGVIHRDIKAANILV---TNTGNVKLCDFGVAALLNQNS 155 (277)
T ss_pred EEecCCCCcHHHHHHc-cCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHHEEE---cCCCCEEEccCCceeecCCCc
Confidence 9999999999988865 478999999999999999999999999999999999999 668889999999987664432
Q ss_pred -ceecccccccccchhhhhh--hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCCCCHHHHH
Q 042823 182 -VYRDIVGSGFYIAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKD 258 (477)
Q Consensus 182 -~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 258 (477)
......|++.|+|||.+.+ .++.++|+|||||++|+|++|.+||...........+.... .+......++.++.+
T Consensus 156 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 233 (277)
T cd06917 156 SKRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFRAMMLIPKSK--PPRLEDNGYSKLLRE 233 (277)
T ss_pred cccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhhhhhccccCC--CCCCCcccCCHHHHH
Confidence 2234578999999999864 46889999999999999999999997765544433322221 111112237889999
Q ss_pred HHHHhcccCccccCCHHHHhcCcccCcCC
Q 042823 259 LVRRMLTKDPKRRITAAQVLEHPWLRESG 287 (477)
Q Consensus 259 li~~~l~~dp~~R~s~~~~l~h~~~~~~~ 287 (477)
++.+||+.||++||++.++++||||++..
T Consensus 234 ~i~~~l~~~p~~R~~~~~il~~~~~~~~~ 262 (277)
T cd06917 234 FVAACLDEEPKERLSAEELLKSKWIKAHS 262 (277)
T ss_pred HHHHHcCCCcccCcCHHHHhhChHhhccc
Confidence 99999999999999999999999998755
|
Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent |
| >cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-42 Score=326.17 Aligned_cols=249 Identities=16% Similarity=0.256 Sum_probs=207.4
Q ss_pred cccccccccccccCCeEEEEEEEc---cCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCe
Q 042823 22 MLHYFFGRMLGRGQFGVSYLCTEN---STNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETA 98 (477)
Q Consensus 22 ~~~Y~~~~~iG~G~~g~V~~~~~~---~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~ 98 (477)
..+|++.+.||+|+||.||+|.++ ..+..||+|.+..... ......+.+|+.++..+ +||||+++++++..+..
T Consensus 4 ~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~--~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~ 80 (266)
T cd05064 4 NKSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCS--DKQRRGFLAEALTLGQF-DHSNIVRLEGVITRGNT 80 (266)
T ss_pred hHHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCC--HHHHHHHHHHHHHHhcC-CCCCcCeEEEEEecCCC
Confidence 357999999999999999999875 4567899998865422 23445688899999998 79999999999999999
Q ss_pred EEEEEeccCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCcccc
Q 042823 99 VHVVMELCEGGDLFDRIIAK-GYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLF 177 (477)
Q Consensus 99 ~~lv~e~~~gg~L~~~l~~~-~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~ 177 (477)
.|+||||+++|+|.+++... ..+++..+..++.|++.||.|||++|++||||||+||++ +.++.+|++|||.+...
T Consensus 81 ~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~i~~al~~lH~~~iiH~dikp~nili---~~~~~~~l~dfg~~~~~ 157 (266)
T cd05064 81 MMIVTEYMSNGALDSFLRKHEGQLVAGQLMGMLPGLASGMKYLSEMGYVHKGLAAHKVLV---NSDLVCKISGFRRLQED 157 (266)
T ss_pred cEEEEEeCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeeccccHhhEEE---cCCCcEEECCCcccccc
Confidence 99999999999999998774 578999999999999999999999999999999999998 67789999999977654
Q ss_pred CCCccee--cccccccccchhhhh-hhcCCccchHhHHHHHHHHhh-CCCCCCCCChhhHHHHHHcCCccCCCCCCCCCC
Q 042823 178 EEGQVYR--DIVGSGFYIAPEVLR-RRYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQGEIDFDTDPWPSIS 253 (477)
Q Consensus 178 ~~~~~~~--~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~l~t-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 253 (477)
....... ...+++.|+|||++. +.++.++||||+||++|++++ |..||...........+..+... +..+.++
T Consensus 158 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~~~~---~~~~~~~ 234 (266)
T cd05064 158 KSEAIYTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQDVIKAVEDGFRL---PAPRNCP 234 (266)
T ss_pred cccchhcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCCCCC---CCCCCCC
Confidence 3222111 234567899999986 468899999999999999775 99999988877777776654321 2235688
Q ss_pred HHHHHHHHHhcccCccccCCHHHHhc
Q 042823 254 STAKDLVRRMLTKDPKRRITAAQVLE 279 (477)
Q Consensus 254 ~~~~~li~~~l~~dp~~R~s~~~~l~ 279 (477)
..+.+++.+||+.+|++|||+.++++
T Consensus 235 ~~~~~li~~c~~~~p~~RP~~~~i~~ 260 (266)
T cd05064 235 NLLHQLMLDCWQKERGERPRFSQIHS 260 (266)
T ss_pred HHHHHHHHHHcCCCchhCCCHHHHHH
Confidence 99999999999999999999999865
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor |
| >KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-43 Score=344.48 Aligned_cols=247 Identities=34% Similarity=0.510 Sum_probs=214.1
Q ss_pred cccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeE
Q 042823 20 DVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAV 99 (477)
Q Consensus 20 ~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~ 99 (477)
.+.+.|.+...+|.|+|+.|-.+.+..+++.+++|++.+.... ..+|+.++....+||||+++++.+.+..+.
T Consensus 319 ~~~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~~~-------~~~e~~~~~~~~~h~niv~~~~v~~~~~~~ 391 (612)
T KOG0603|consen 319 PFTESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRADD-------NQDEIPISLLVRDHPNIVKSHDVYEDGKEI 391 (612)
T ss_pred CcchhhccccccCCCCccceeeeeccccccchhheeccccccc-------cccccchhhhhcCCCcceeecceecCCcee
Confidence 5788999999999999999999999999999999999766322 235676777777999999999999999999
Q ss_pred EEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCC
Q 042823 100 HVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEE 179 (477)
Q Consensus 100 ~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~ 179 (477)
|+|||++.|+.|.+.+.....+. .++..|+++|+.|+.|||++|+|||||||+|||+. +..++++|||||.+.....
T Consensus 392 ~~v~e~l~g~ell~ri~~~~~~~-~e~~~w~~~lv~Av~~LH~~gvvhRDLkp~NIL~~--~~~g~lrltyFG~a~~~~~ 468 (612)
T KOG0603|consen 392 YLVMELLDGGELLRRIRSKPEFC-SEASQWAAELVSAVDYLHEQGVVHRDLKPGNILLD--GSAGHLRLTYFGFWSELER 468 (612)
T ss_pred eeeehhccccHHHHHHHhcchhH-HHHHHHHHHHHHHHHHHHhcCeeecCCChhheeec--CCCCcEEEEEechhhhCch
Confidence 99999999999999998877666 88889999999999999999999999999999994 4778899999999987765
Q ss_pred Ccceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChh-hHHHHHHcCCccCCCCCCCCCCHHHH
Q 042823 180 GQVYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKK-GTYDAILQGEIDFDTDPWPSISSTAK 257 (477)
Q Consensus 180 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~ 257 (477)
. +.+.+-|..|.|||++.. .|+++||+||||++||+||+|+.||...... ++...+..+... ..+|..++
T Consensus 469 ~--~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~~ei~~~i~~~~~s------~~vS~~AK 540 (612)
T KOG0603|consen 469 S--CDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAGIEIHTRIQMPKFS------ECVSDEAK 540 (612)
T ss_pred h--hcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCchHHHHHhhcCCccc------cccCHHHH
Confidence 4 344466888999999975 6999999999999999999999999876665 344444333222 46899999
Q ss_pred HHHHHhcccCccccCCHHHHhcCcccC
Q 042823 258 DLVRRMLTKDPKRRITAAQVLEHPWLR 284 (477)
Q Consensus 258 ~li~~~l~~dp~~R~s~~~~l~h~~~~ 284 (477)
+||++||+.||.+||++.+++.|||+.
T Consensus 541 dLl~~LL~~dP~~Rl~~~~i~~h~w~~ 567 (612)
T KOG0603|consen 541 DLLQQLLQVDPALRLGADEIGAHPWFL 567 (612)
T ss_pred HHHHHhccCChhhCcChhhhccCcchh
Confidence 999999999999999999999999993
|
|
| >cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-42 Score=334.17 Aligned_cols=260 Identities=27% Similarity=0.413 Sum_probs=206.1
Q ss_pred cccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCC
Q 042823 18 YEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDET 97 (477)
Q Consensus 18 ~~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~ 97 (477)
.....++|.+.+.||+|+||.||+|.+..+++.||+|++....... .......+|+.+++++ .||||+++++++....
T Consensus 7 ~~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~-~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~ 84 (310)
T cd07865 7 FCDEVSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKE-GFPITALREIKILQLL-KHENVVNLIEICRTKA 84 (310)
T ss_pred ccchhhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcC-CchhHHHHHHHHHHhC-CCCCccceEEEEeccc
Confidence 4556678999999999999999999999999999999986543221 2223456799999999 7999999999986543
Q ss_pred --------eEEEEEeccCCCchHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEE
Q 042823 98 --------AVHVVMELCEGGDLFDRIIAKG-YNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKV 168 (477)
Q Consensus 98 --------~~~lv~e~~~gg~L~~~l~~~~-~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl 168 (477)
..|+||||+.+ +|.+.+.... .+++.++..++.|++.||.|||++|++|+||||+||++ +.++.+||
T Consensus 85 ~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dl~p~nil~---~~~~~~kl 160 (310)
T cd07865 85 TPYNRYKGSFYLVFEFCEH-DLAGLLSNKNVKFTLSEIKKVMKMLLNGLYYIHRNKILHRDMKAANILI---TKDGILKL 160 (310)
T ss_pred ccccCCCceEEEEEcCCCc-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEE---CCCCcEEE
Confidence 45999999965 8888776643 68999999999999999999999999999999999999 77889999
Q ss_pred eecCCccccCCCc-----ceecccccccccchhhhhh--hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCC
Q 042823 169 TDFGSALLFEEGQ-----VYRDIVGSGFYIAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGE 241 (477)
Q Consensus 169 ~Dfg~a~~~~~~~-----~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~ 241 (477)
+|||++....... ......++..|+|||.+.+ .++.++||||+|+++|+|++|.+||.+.........+....
T Consensus 161 ~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~~~~ 240 (310)
T cd07865 161 ADFGLARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLC 240 (310)
T ss_pred CcCCCcccccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHh
Confidence 9999987653221 1123467888999998864 36889999999999999999999998766544433332211
Q ss_pred ccCCCCCC----------------------------CCCCHHHHHHHHHhcccCccccCCHHHHhcCccc
Q 042823 242 IDFDTDPW----------------------------PSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWL 283 (477)
Q Consensus 242 ~~~~~~~~----------------------------~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~ 283 (477)
...+...+ ...++.+.+||.+||..||.+|||++++++||||
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~h~~f 310 (310)
T cd07865 241 GSITPEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALNHDFF 310 (310)
T ss_pred CCCChhhcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhcCCCC
Confidence 11110000 1135778899999999999999999999999997
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl |
| >cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-42 Score=331.07 Aligned_cols=253 Identities=21% Similarity=0.276 Sum_probs=202.0
Q ss_pred ccccccccccccccCCeEEEEEEEcc----------------CCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCC
Q 042823 21 VMLHYFFGRMLGRGQFGVSYLCTENS----------------TNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQP 84 (477)
Q Consensus 21 ~~~~Y~~~~~iG~G~~g~V~~~~~~~----------------~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hp 84 (477)
..++|++.+.||+|+||.||+|.+.. ++..||+|++.... .......+.+|+.++..+ +||
T Consensus 3 ~~~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l-~h~ 79 (304)
T cd05096 3 PRGHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDA--NKNARNDFLKEVKILSRL-KDP 79 (304)
T ss_pred chhhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCC--CHHHHHHHHHHHHHHhhc-CCC
Confidence 35689999999999999999998632 34579999886432 233456788999999999 799
Q ss_pred CeeEEEEEEEeCCeEEEEEeccCCCchHHHHHHcC-------------------CCCHHHHHHHHHHHHHHHHHHHHcCC
Q 042823 85 NVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKG-------------------YNSERDAATVLRAIVNAVNVCHSMGV 145 (477)
Q Consensus 85 niv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~-------------------~~~~~~~~~i~~qil~~L~~lH~~~i 145 (477)
||+++++++.+....|+||||+++|+|.+++.... .++...+..++.||+.||.|||++||
T Consensus 80 niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i 159 (304)
T cd05096 80 NIIRLLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLNF 159 (304)
T ss_pred CeeEEEEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCCc
Confidence 99999999999999999999999999999986532 35667889999999999999999999
Q ss_pred eeccCCCCceeeeecCCCCCEEEeecCCccccCCCcc---eecccccccccchhhhh-hhcCCccchHhHHHHHHHHhh-
Q 042823 146 MHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQV---YRDIVGSGFYIAPEVLR-RRYGKEIDIWSAGVILYILLS- 220 (477)
Q Consensus 146 vH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~l~t- 220 (477)
+||||||+||++ +.++.+||+|||++........ .....++..|+|||++. +.++.++|||||||++|+|++
T Consensus 160 vH~dlkp~Nill---~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~ 236 (304)
T cd05096 160 VHRDLATRNCLV---GENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILML 236 (304)
T ss_pred cccCcchhheEE---cCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHc
Confidence 999999999999 6778899999999876543321 12234577899999975 468999999999999999986
Q ss_pred -CCCCCCCCChhhHHHHHHc----CCccCCCCCCCCCCHHHHHHHHHhcccCccccCCHHHHhc
Q 042823 221 -GVPPFWAETKKGTYDAILQ----GEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLE 279 (477)
Q Consensus 221 -g~~pf~~~~~~~~~~~i~~----~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~ 279 (477)
+..||...+.......+.. ..........+.+++.+.+++.+||..||++|||+.++.+
T Consensus 237 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~ 300 (304)
T cd05096 237 CKEQPYGELTDEQVIENAGEFFRDQGRQVYLFRPPPCPQGLYELMLQCWSRDCRERPSFSDIHA 300 (304)
T ss_pred cCCCCCCcCCHHHHHHHHHHHhhhccccccccCCCCCCHHHHHHHHHHccCCchhCcCHHHHHH
Confidence 6678877665555444322 1111111122467899999999999999999999999843
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k |
| >cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-42 Score=324.32 Aligned_cols=254 Identities=28% Similarity=0.431 Sum_probs=216.4
Q ss_pred cccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEE
Q 042823 24 HYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVVM 103 (477)
Q Consensus 24 ~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~lv~ 103 (477)
.|++.+.||+|++|.||+|.+..+++.||+|++...... .....+.+|+..+..+ .||||+++++++.....+|+||
T Consensus 2 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~--~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~lv~ 78 (264)
T cd06623 2 DLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDE--EFRKQLLRELKTLRSC-ESPYVVKCYGAFYKEGEISIVL 78 (264)
T ss_pred cceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcch--HHHHHHHHHHHHHHhc-CCCCeeeEEEEEccCCeEEEEE
Confidence 688999999999999999999999999999998654321 3456788999999999 6999999999999999999999
Q ss_pred eccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH-cCCeeccCCCCceeeeecCCCCCEEEeecCCccccCCCcc
Q 042823 104 ELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHS-MGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQV 182 (477)
Q Consensus 104 e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~-~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~ 182 (477)
||++|++|.+++.....+++..+..++.|++.||.|||+ .|++||||+|+||++ +.++.++|+|||.+........
T Consensus 79 e~~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lh~~~~~~H~~l~~~ni~~---~~~~~~~l~df~~~~~~~~~~~ 155 (264)
T cd06623 79 EYMDGGSLADLLKKVGKIPEPVLAYIARQILKGLDYLHTKRHIIHRDIKPSNLLI---NSKGEVKIADFGISKVLENTLD 155 (264)
T ss_pred EecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhccCCCccCCCCHHHEEE---CCCCCEEEccCccceecccCCC
Confidence 999999999999888889999999999999999999999 999999999999999 7788999999999887644332
Q ss_pred e-ecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCC---hhhHHHHHHcCCccCCCCCCCC-CCHHH
Q 042823 183 Y-RDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAET---KKGTYDAILQGEIDFDTDPWPS-ISSTA 256 (477)
Q Consensus 183 ~-~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~---~~~~~~~i~~~~~~~~~~~~~~-~~~~~ 256 (477)
. ....++..|+|||.+.. .++.++|+||||+++|+|+||..||.... .......+....... .... ++..+
T Consensus 156 ~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l 232 (264)
T cd06623 156 QCNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFELMQAICDGPPPS---LPAEEFSPEF 232 (264)
T ss_pred cccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccccCHHHHHHHHhcCCCCC---CCcccCCHHH
Confidence 2 24568899999999864 57889999999999999999999997763 333344444322211 1123 78999
Q ss_pred HHHHHHhcccCccccCCHHHHhcCcccCcC
Q 042823 257 KDLVRRMLTKDPKRRITAAQVLEHPWLRES 286 (477)
Q Consensus 257 ~~li~~~l~~dp~~R~s~~~~l~h~~~~~~ 286 (477)
.++|.+||..+|++|||+.++++|||++..
T Consensus 233 ~~li~~~l~~~p~~R~~~~~ll~~~~~~~~ 262 (264)
T cd06623 233 RDFISACLQKDPKKRPSAAELLQHPFIKKA 262 (264)
T ss_pred HHHHHHHccCChhhCCCHHHHHhCHHHHhc
Confidence 999999999999999999999999999654
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of |
| >cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-42 Score=325.04 Aligned_cols=252 Identities=27% Similarity=0.446 Sum_probs=209.3
Q ss_pred ccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 042823 23 LHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVV 102 (477)
Q Consensus 23 ~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~lv 102 (477)
++|++.+.||+|+||.||+|+++.+++.||+|.+.............+.+|+.+++.+ +||||+++++++...+..|+|
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~~v 80 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQL-NHPNVIKYLDSFIEDNELNIV 80 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhC-CCcceeeeeeeEEECCeEEEE
Confidence 5799999999999999999999999999999988654444444556788899999999 799999999999999999999
Q ss_pred EeccCCCchHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccC
Q 042823 103 MELCEGGDLFDRIIA----KGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFE 178 (477)
Q Consensus 103 ~e~~~gg~L~~~l~~----~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~ 178 (477)
+||+++|+|.+++.. ...+++..+..++.|++.||.|||++|++||||||+||++ +.++.++|+|||++....
T Consensus 81 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~nil~---~~~~~~~l~d~g~~~~~~ 157 (267)
T cd08228 81 LELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRRVMHRDIKPANVFI---TATGVVKLGDLGLGRFFS 157 (267)
T ss_pred EEecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCCHHHEEE---cCCCCEEECccccceecc
Confidence 999999999888753 3457899999999999999999999999999999999999 667889999999887654
Q ss_pred CCcc-eecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCCh--hhHHHHHHcCCccCCCCCCCCCCH
Q 042823 179 EGQV-YRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETK--KGTYDAILQGEIDFDTDPWPSISS 254 (477)
Q Consensus 179 ~~~~-~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~--~~~~~~i~~~~~~~~~~~~~~~~~ 254 (477)
.... .....|++.|+|||.+.+ .++.++|+||+|+++|+|++|..||..... ......+.... +++.+...++.
T Consensus 158 ~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 235 (267)
T cd08228 158 SKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFSLCQKIEQCD--YPPLPTEHYSE 235 (267)
T ss_pred chhHHHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccccHHHHHHHHhcCC--CCCCChhhcCH
Confidence 3322 234568899999999864 578899999999999999999999965432 23333333322 22222335788
Q ss_pred HHHHHHHHhcccCccccCCHHHHhcC
Q 042823 255 TAKDLVRRMLTKDPKRRITAAQVLEH 280 (477)
Q Consensus 255 ~~~~li~~~l~~dp~~R~s~~~~l~h 280 (477)
.+.+++.+||..+|++|||+.++++.
T Consensus 236 ~~~~li~~cl~~~p~~Rp~~~~vl~~ 261 (267)
T cd08228 236 KLRELVSMCIYPDPDQRPDIGYVHQI 261 (267)
T ss_pred HHHHHHHHHCCCCcccCcCHHHHHHH
Confidence 99999999999999999999999863
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase |
| >cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-42 Score=322.35 Aligned_cols=248 Identities=29% Similarity=0.488 Sum_probs=212.3
Q ss_pred cccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEE
Q 042823 24 HYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVVM 103 (477)
Q Consensus 24 ~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~lv~ 103 (477)
+|++.+.||+|+||.||+|.++.+++.+|+|.+..... ......+.+|+.+++.+ +||||+++++++.....+|+||
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~--~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~ 77 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKS--SSAVEDSRKEAVLLAKM-KHPNIVAFKESFEADGHLYIVM 77 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcc--hHHHHHHHHHHHHHHhC-CCCCcceEEEEEEECCEEEEEE
Confidence 58899999999999999999999999999999864332 23456778899999988 7999999999999999999999
Q ss_pred eccCCCchHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCCCc
Q 042823 104 ELCEGGDLFDRIIAK--GYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQ 181 (477)
Q Consensus 104 e~~~gg~L~~~l~~~--~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~ 181 (477)
||+++|+|.+++... ..+++..+..++.|++.||.|||++|++|+||||+||++ +.++.++|+|||.+.......
T Consensus 78 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dl~p~nili---~~~~~~~l~dfg~~~~~~~~~ 154 (255)
T cd08219 78 EYCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEKRVLHRDIKSKNIFL---TQNGKVKLGDFGSARLLTSPG 154 (255)
T ss_pred eeCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEE---CCCCcEEEcccCcceeecccc
Confidence 999999999988753 457899999999999999999999999999999999999 678889999999987654322
Q ss_pred -ceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCCCCHHHHHH
Q 042823 182 -VYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDL 259 (477)
Q Consensus 182 -~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l 259 (477)
......|++.|+|||++.+ .++.++|+||+|+++|+|++|..||...+.......+..+..... ...++..++++
T Consensus 155 ~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l 231 (255)
T cd08219 155 AYACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSWKNLILKVCQGSYKPL---PSHYSYELRSL 231 (255)
T ss_pred cccccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCHHHHHHHHhcCCCCCC---CcccCHHHHHH
Confidence 2234578999999999865 588999999999999999999999988776666666665543321 23578899999
Q ss_pred HHHhcccCccccCCHHHHhcC
Q 042823 260 VRRMLTKDPKRRITAAQVLEH 280 (477)
Q Consensus 260 i~~~l~~dp~~R~s~~~~l~h 280 (477)
|.+||+.||++|||+.+++.-
T Consensus 232 i~~~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 232 IKQMFKRNPRSRPSATTILSR 252 (255)
T ss_pred HHHHHhCCcccCCCHHHHhhc
Confidence 999999999999999999864
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati |
| >cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.4e-43 Score=332.06 Aligned_cols=254 Identities=28% Similarity=0.418 Sum_probs=207.6
Q ss_pred cccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEE
Q 042823 24 HYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVVM 103 (477)
Q Consensus 24 ~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~lv~ 103 (477)
.|++++.||.|++|.||+|.++.+++.||+|.+...... ......+.+|++++.++ +||||+++++++.+....|+||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~~v~ 78 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTET-EGVPSTAIREISLLKEL-NHPNIVKLLDVIHTENKLYLVF 78 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccc-cccchHHHHHHHHHHhc-CCCCCcchhhhcccCCcEEEEe
Confidence 488999999999999999999999999999988654322 22335678899999999 7999999999999999999999
Q ss_pred eccCCCchHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCCCc
Q 042823 104 ELCEGGDLFDRIIA--KGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQ 181 (477)
Q Consensus 104 e~~~gg~L~~~l~~--~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~ 181 (477)
||+. ++|.+++.. ...+++..+..++.|++.||.|||+.|++||||+|+||++ +.++.+||+|||++.......
T Consensus 79 e~~~-~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~H~~l~p~nill---~~~~~~~l~dfg~~~~~~~~~ 154 (284)
T cd07860 79 EFLH-QDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPV 154 (284)
T ss_pred eccc-cCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE---CCCCCEEEeeccchhhcccCc
Confidence 9996 589888865 3568999999999999999999999999999999999999 677889999999887653322
Q ss_pred -ceecccccccccchhhhhh--hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCcc---------------
Q 042823 182 -VYRDIVGSGFYIAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEID--------------- 243 (477)
Q Consensus 182 -~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~--------------- 243 (477)
......+++.|+|||++.+ .++.++|||||||++|+|+||..||...+.......+.+....
T Consensus 155 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (284)
T cd07860 155 RTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSLPDY 234 (284)
T ss_pred cccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhhhhHHHHH
Confidence 2233457889999998764 3688999999999999999999999876654443333221100
Q ss_pred ---CCC-------CCCCCCCHHHHHHHHHhcccCccccCCHHHHhcCccc
Q 042823 244 ---FDT-------DPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWL 283 (477)
Q Consensus 244 ---~~~-------~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~ 283 (477)
++. ...+.++++++++|.+||+.||.+|||+.++++||||
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~f 284 (284)
T cd07860 235 KPSFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALAHPFF 284 (284)
T ss_pred HhhcccccccCHHHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhcCCCC
Confidence 000 0124578899999999999999999999999999997
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex |
| >cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-42 Score=332.15 Aligned_cols=250 Identities=21% Similarity=0.278 Sum_probs=203.5
Q ss_pred ccccccccccccCCeEEEEEEEccCCceE--EEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEE
Q 042823 23 LHYFFGRMLGRGQFGVSYLCTENSTNRPY--ACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVH 100 (477)
Q Consensus 23 ~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~--aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~ 100 (477)
++|++.+.||+|+||.||+|.++.++..+ |+|.+.. .........+.+|+.++.++.+||||+++++++...+.+|
T Consensus 7 ~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~--~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~ 84 (303)
T cd05088 7 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKE--YASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLY 84 (303)
T ss_pred hhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecc--cCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCce
Confidence 37899999999999999999998777654 6665532 2223445678889999999978999999999999999999
Q ss_pred EEEeccCCCchHHHHHHcC----------------CCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCC
Q 042823 101 VVMELCEGGDLFDRIIAKG----------------YNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNA 164 (477)
Q Consensus 101 lv~e~~~gg~L~~~l~~~~----------------~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~ 164 (477)
+||||+++|+|.+++...+ .+++.++..++.|++.||.|||++|++||||||+||++ +..+
T Consensus 85 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dlkp~Nili---~~~~ 161 (303)
T cd05088 85 LAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILV---GENY 161 (303)
T ss_pred EEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEe---cCCC
Confidence 9999999999999997543 46889999999999999999999999999999999999 6778
Q ss_pred CEEEeecCCccccCCCcceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhh-CCCCCCCCChhhHHHHHHcCCc
Q 042823 165 LLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQGEI 242 (477)
Q Consensus 165 ~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~t-g~~pf~~~~~~~~~~~i~~~~~ 242 (477)
.+||+|||++.............++..|+|||.+.+ .++.++|||||||++|+|+| |.+||......+....+..+.
T Consensus 162 ~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~- 240 (303)
T cd05088 162 VAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGY- 240 (303)
T ss_pred cEEeCccccCcccchhhhcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCChHHHHHHHhcCC-
Confidence 899999998864322111112234567999998864 57899999999999999998 999998777666665554331
Q ss_pred cCCCCCCCCCCHHHHHHHHHhcccCccccCCHHHHhcC
Q 042823 243 DFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEH 280 (477)
Q Consensus 243 ~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h 280 (477)
....+..+++.+.+++.+||+.+|++||++.+++++
T Consensus 241 --~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 276 (303)
T cd05088 241 --RLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVS 276 (303)
T ss_pred --cCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 111223578899999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A |
| >cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-42 Score=330.23 Aligned_cols=255 Identities=26% Similarity=0.413 Sum_probs=204.5
Q ss_pred cccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEE
Q 042823 22 MLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHV 101 (477)
Q Consensus 22 ~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~l 101 (477)
.++|++.+.||+|++|.||+|.++.+++.||+|.+...... .....+.+|+.+++.+ +||||+++++++.++...|+
T Consensus 4 ~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~--~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~l 80 (291)
T cd07844 4 LETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEE--GAPFTAIREASLLKDL-KHANIVTLHDIIHTKKTLTL 80 (291)
T ss_pred ccceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEeccccc--CCchhHHHHHHHHhhC-CCcceeeEEEEEecCCeEEE
Confidence 36899999999999999999999989999999998654321 1223456899999999 79999999999999999999
Q ss_pred EEeccCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCCC
Q 042823 102 VMELCEGGDLFDRIIAK-GYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEG 180 (477)
Q Consensus 102 v~e~~~gg~L~~~l~~~-~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~ 180 (477)
||||+.+ +|.+++... ..+++..+..++.|++.||.|||++|++||||||+||++ +.++.+||+|||.+......
T Consensus 81 v~e~~~~-~L~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~dl~p~nil~---~~~~~~kl~dfg~~~~~~~~ 156 (291)
T cd07844 81 VFEYLDT-DLKQYMDDCGGGLSMHNVRLFLFQLLRGLAYCHQRRVLHRDLKPQNLLI---SERGELKLADFGLARAKSVP 156 (291)
T ss_pred EEecCCC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCHHHEEE---cCCCCEEECccccccccCCC
Confidence 9999975 999988764 467999999999999999999999999999999999999 77788999999988654321
Q ss_pred -cceecccccccccchhhhhh--hcCCccchHhHHHHHHHHhhCCCCCCCCC-hhhHHHHHHcCCc--------------
Q 042823 181 -QVYRDIVGSGFYIAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPFWAET-KKGTYDAILQGEI-------------- 242 (477)
Q Consensus 181 -~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~l~tg~~pf~~~~-~~~~~~~i~~~~~-------------- 242 (477)
.......+++.|+|||++.+ .++.++||||+||++|+|++|.+||.... ..+....+.....
T Consensus 157 ~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (291)
T cd07844 157 SKTYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWPGVSSNP 236 (291)
T ss_pred CccccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCCChhhhhhhhhcc
Confidence 11223356889999999864 47889999999999999999999997654 2222222211000
Q ss_pred -----cCC-------CCCCCCCC--HHHHHHHHHhcccCccccCCHHHHhcCccc
Q 042823 243 -----DFD-------TDPWPSIS--STAKDLVRRMLTKDPKRRITAAQVLEHPWL 283 (477)
Q Consensus 243 -----~~~-------~~~~~~~~--~~~~~li~~~l~~dp~~R~s~~~~l~h~~~ 283 (477)
.+. ...++.++ ..+.+++.+||+.+|++|||+.++++||||
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~~~~f 291 (291)
T cd07844 237 EFKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMKHPYF 291 (291)
T ss_pred ccccccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhcCCCC
Confidence 000 00112344 888999999999999999999999999997
|
Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the |
| >cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-42 Score=325.95 Aligned_cols=257 Identities=30% Similarity=0.513 Sum_probs=216.2
Q ss_pred ccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 042823 23 LHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVV 102 (477)
Q Consensus 23 ~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~lv 102 (477)
..|.-.+.||+|++|.||+|.+..+++.+|+|.+.... ......+.+|+.+++.+ +||||+++++++...+..|+|
T Consensus 19 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~---~~~~~~~~~e~~~l~~~-~h~~vv~~~~~~~~~~~~~~v 94 (285)
T cd06648 19 SYLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRK---QQRRELLFNEVVIMRDY-QHPNIVEMYSSYLVGDELWVV 94 (285)
T ss_pred HhhhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccc---hhHHHHHHHHHHHHHHc-CCCChheEEEEEEcCCeEEEE
Confidence 35666689999999999999999899999999885432 22345678899999998 799999999999999999999
Q ss_pred EeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCCCc-
Q 042823 103 MELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQ- 181 (477)
Q Consensus 103 ~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~- 181 (477)
+||++|++|.+++.. +.+++..+..++.|++.||.|||++|++||||+|+||++ +.++.++|+|||.+.......
T Consensus 95 ~e~~~~~~L~~~~~~-~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~dl~p~Nil~---~~~~~~~l~d~g~~~~~~~~~~ 170 (285)
T cd06648 95 MEFLEGGALTDIVTH-TRMNEEQIATVCLAVLKALSFLHAQGVIHRDIKSDSILL---TSDGRVKLSDFGFCAQVSKEVP 170 (285)
T ss_pred EeccCCCCHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChhhEEE---cCCCcEEEcccccchhhccCCc
Confidence 999999999998877 678999999999999999999999999999999999999 678899999999876543321
Q ss_pred ceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCCCCHHHHHHH
Q 042823 182 VYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLV 260 (477)
Q Consensus 182 ~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li 260 (477)
......|++.|+|||.+.+ .++.++||||+||++|+|++|..||...+.......+......... ..+.++..+.+++
T Consensus 171 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~li 249 (285)
T cd06648 171 RRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQAMKRIRDNLPPKLK-NLHKVSPRLRSFL 249 (285)
T ss_pred ccccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHhcCCCCCc-ccccCCHHHHHHH
Confidence 2233568999999999865 5889999999999999999999999877666666665554322211 1234789999999
Q ss_pred HHhcccCccccCCHHHHhcCcccCcCCC
Q 042823 261 RRMLTKDPKRRITAAQVLEHPWLRESGE 288 (477)
Q Consensus 261 ~~~l~~dp~~R~s~~~~l~h~~~~~~~~ 288 (477)
.+||+.+|++|||+.++++||||+....
T Consensus 250 ~~~l~~~p~~Rpt~~~il~~~~~~~~~~ 277 (285)
T cd06648 250 DRMLVRDPAQRATAAELLNHPFLAKAGP 277 (285)
T ss_pred HHHcccChhhCcCHHHHccCcccccCCC
Confidence 9999999999999999999999987654
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun |
| >cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-42 Score=330.53 Aligned_cols=262 Identities=28% Similarity=0.492 Sum_probs=218.8
Q ss_pred ccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCe
Q 042823 19 EDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETA 98 (477)
Q Consensus 19 ~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~ 98 (477)
......|.....||+|+||.||+|.+..+++.||+|.+..... .....+.+|+.++..+ +||||+++++++..+..
T Consensus 17 ~~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~---~~~~~~~~e~~~l~~l-~hp~i~~~~~~~~~~~~ 92 (297)
T cd06659 17 GDPRSLLENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQ---QRRELLFNEVVIMRDY-QHQNVVEMYKSYLVGEE 92 (297)
T ss_pred ccchhhHHhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEeccc---chHHHHHHHHHHHHhC-CCCchhhhhhheeeCCe
Confidence 3555667778899999999999999999999999999865432 2345678899999988 79999999999999999
Q ss_pred EEEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccC
Q 042823 99 VHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFE 178 (477)
Q Consensus 99 ~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~ 178 (477)
.|+||||+++++|.+++.. ..+++..+..++.|++.||.|||++|++||||||+||++ +.++.+||+|||++....
T Consensus 93 ~~iv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dl~p~Nill---~~~~~~kL~dfg~~~~~~ 168 (297)
T cd06659 93 LWVLMEFLQGGALTDIVSQ-TRLNEEQIATVCESVLQALCYLHSQGVIHRDIKSDSILL---TLDGRVKLSDFGFCAQIS 168 (297)
T ss_pred EEEEEecCCCCCHHHHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHeEE---ccCCcEEEeechhHhhcc
Confidence 9999999999999886644 568999999999999999999999999999999999999 778899999999886543
Q ss_pred CCc-ceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCCCCHHH
Q 042823 179 EGQ-VYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTA 256 (477)
Q Consensus 179 ~~~-~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 256 (477)
... ......|++.|+|||++.+ .++.++||||+||++|+|++|..||...........+...... ....+..+++.+
T Consensus 169 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l 247 (297)
T cd06659 169 KDVPKRKSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPPP-KLKNAHKISPVL 247 (297)
T ss_pred cccccccceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhccCCC-CccccCCCCHHH
Confidence 322 2234578999999999864 5889999999999999999999999877666555554433222 122334678999
Q ss_pred HHHHHHhcccCccccCCHHHHhcCcccCcCCCC
Q 042823 257 KDLVRRMLTKDPKRRITAAQVLEHPWLRESGEA 289 (477)
Q Consensus 257 ~~li~~~l~~dp~~R~s~~~~l~h~~~~~~~~~ 289 (477)
.++|.+||+.+|++||++.++++||||......
T Consensus 248 ~~~i~~~l~~~P~~Rps~~~ll~~~~~~~~~~~ 280 (297)
T cd06659 248 RDFLERMLTREPQERATAQELLDHPFLLQTGLP 280 (297)
T ss_pred HHHHHHHhcCCcccCcCHHHHhhChhhccCCCc
Confidence 999999999999999999999999999876543
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i |
| >cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-42 Score=327.96 Aligned_cols=256 Identities=24% Similarity=0.305 Sum_probs=213.5
Q ss_pred ccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 042823 23 LHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVV 102 (477)
Q Consensus 23 ~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~lv 102 (477)
++|++.+.||+|+||+||+|.+..+++.||+|++..... ......+.+|++++..+ +||||+++++++.....+|+|
T Consensus 5 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~--~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv 81 (284)
T cd06620 5 EDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAK--SSVRKQILRELQIMHEC-RSPYIVSFYGAFLNENNICMC 81 (284)
T ss_pred HHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCc--chHHHHHHHHHHHHHHc-CCCCcceEeeeEecCCEEEEE
Confidence 579999999999999999999999999999998865432 23456788999999999 799999999999999999999
Q ss_pred EeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH-cCCeeccCCCCceeeeecCCCCCEEEeecCCccccCCCc
Q 042823 103 MELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHS-MGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQ 181 (477)
Q Consensus 103 ~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~-~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~ 181 (477)
|||+++++|.+++...+.++...+..++.+++.||.|||+ ++++||||+|+||++ +.++.++|+|||++......
T Consensus 82 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~---~~~~~~~l~d~gl~~~~~~~- 157 (284)
T cd06620 82 MEFMDCGSLDRIYKKGGPIPVEILGKIAVAVVEGLTYLYNVHRIMHRDIKPSNILV---NSRGQIKLCDFGVSGELINS- 157 (284)
T ss_pred EecCCCCCHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHhcCeeccCCCHHHEEE---CCCCcEEEccCCcccchhhh-
Confidence 9999999999999888889999999999999999999997 699999999999999 67788999999988654322
Q ss_pred ceecccccccccchhhhh-hhcCCccchHhHHHHHHHHhhCCCCCCCCChh-----------hHHHHHHcCCccCCCCCC
Q 042823 182 VYRDIVGSGFYIAPEVLR-RRYGKEIDIWSAGVILYILLSGVPPFWAETKK-----------GTYDAILQGEIDFDTDPW 249 (477)
Q Consensus 182 ~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~l~tg~~pf~~~~~~-----------~~~~~i~~~~~~~~~~~~ 249 (477)
......|+..|+|||++. +.++.++|+||+||++|+|++|..||...... .....+..... +....
T Consensus 158 ~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 235 (284)
T cd06620 158 IADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQEPP--PRLPS 235 (284)
T ss_pred ccCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhhccC--CCCCc
Confidence 123457899999999975 46888999999999999999999999765432 12222222211 11112
Q ss_pred CCCCHHHHHHHHHhcccCccccCCHHHHhcCcccCcCC
Q 042823 250 PSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESG 287 (477)
Q Consensus 250 ~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~~ 287 (477)
..++..+.+|+.+||..||++|||+.++++|+||....
T Consensus 236 ~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~~~~~~~ 273 (284)
T cd06620 236 SDFPEDLRDFVDACLLKDPTERPTPQQLCAMPPFIQAL 273 (284)
T ss_pred hhcCHHHHHHHHHHhcCCcccCcCHHHHhcCccccccc
Confidence 23788999999999999999999999999999997654
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.9e-43 Score=330.65 Aligned_cols=254 Identities=32% Similarity=0.614 Sum_probs=219.2
Q ss_pred ccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 042823 23 LHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVV 102 (477)
Q Consensus 23 ~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~lv 102 (477)
++|.+.+.||+|+||.||+|.+..+++.||+|++.+...........+.+|+.++.++.+||||+++++++......++|
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv 80 (280)
T cd05581 1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFV 80 (280)
T ss_pred CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEE
Confidence 47999999999999999999999999999999987644333344567888999999995599999999999999999999
Q ss_pred EeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCCCc-
Q 042823 103 MELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQ- 181 (477)
Q Consensus 103 ~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~- 181 (477)
|||+++++|.+++.+.+.+++..+..++.|++.||.|||++|++|+||+|+||++ +.++.++|+|||++.......
T Consensus 81 ~e~~~~~~L~~~l~~~~~l~~~~~~~i~~ql~~~l~~Lh~~~~~H~dl~~~ni~i---~~~~~~~l~df~~~~~~~~~~~ 157 (280)
T cd05581 81 LEYAPNGELLQYIRKYGSLDEKCTRFYAAEILLALEYLHSKGIIHRDLKPENILL---DKDMHIKITDFGTAKVLDPNSS 157 (280)
T ss_pred EcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEE---CCCCCEEecCCccccccCCccc
Confidence 9999999999999998889999999999999999999999999999999999999 677889999999887654322
Q ss_pred --------------------ceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcC
Q 042823 182 --------------------VYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQG 240 (477)
Q Consensus 182 --------------------~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~ 240 (477)
......|+..|+|||++.. .++.++|+||||++++++++|..||...........+...
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~ 237 (280)
T cd05581 158 PESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNEYLTFQKILKL 237 (280)
T ss_pred cccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhc
Confidence 1123467889999999764 5788999999999999999999999887766666665544
Q ss_pred CccCCCCCCCCCCHHHHHHHHHhcccCccccCCH----HHHhcCccc
Q 042823 241 EIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITA----AQVLEHPWL 283 (477)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~----~~~l~h~~~ 283 (477)
...++ +.+++.+.+||.+||+.+|++|||+ .++++||||
T Consensus 238 ~~~~~----~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~~~~~ 280 (280)
T cd05581 238 EYSFP----PNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKAHPFF 280 (280)
T ss_pred CCCCC----CccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhcCCCC
Confidence 43333 3568999999999999999999999 999999997
|
Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto |
| >KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-44 Score=328.89 Aligned_cols=261 Identities=30% Similarity=0.492 Sum_probs=232.1
Q ss_pred cccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeE
Q 042823 20 DVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAV 99 (477)
Q Consensus 20 ~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~ 99 (477)
.=..+|.++.+||+|+||.|.+|..+.|...||||++++.........+.-..|-+++.....-|.+++++.+|+.-+.+
T Consensus 346 i~~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRL 425 (683)
T KOG0696|consen 346 IKATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRL 425 (683)
T ss_pred eeecccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhhe
Confidence 33457888999999999999999999999999999998776544444555556667766665678999999999999999
Q ss_pred EEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCcccc-C
Q 042823 100 HVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLF-E 178 (477)
Q Consensus 100 ~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~-~ 178 (477)
|+||||+.||+|.-.+.+-+++.|..+..++..|+-||-+||++||+.||||.+|||+ +..++|||+|||+++.- .
T Consensus 426 yFVMEyvnGGDLMyhiQQ~GkFKEp~AvFYAaEiaigLFFLh~kgIiYRDLKLDNvmL---d~eGHiKi~DFGmcKEni~ 502 (683)
T KOG0696|consen 426 YFVMEYVNGGDLMYHIQQVGKFKEPVAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVML---DSEGHIKIADFGMCKENIF 502 (683)
T ss_pred eeEEEEecCchhhhHHHHhcccCCchhhhhhHHHHHHhhhhhcCCeeeeeccccceEe---ccCCceEeeeccccccccc
Confidence 9999999999999999999999999999999999999999999999999999999999 89999999999998753 3
Q ss_pred CCcceecccccccccchhhhh-hhcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCCCCHHHH
Q 042823 179 EGQVYRDIVGSGFYIAPEVLR-RRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAK 257 (477)
Q Consensus 179 ~~~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 257 (477)
......+++|||.|+|||++. ++|+.++|.||+||+||||+.|++||.+....+.+.+|......++. ++|.++.
T Consensus 503 ~~~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~elF~aI~ehnvsyPK----slSkEAv 578 (683)
T KOG0696|consen 503 DGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQAIMEHNVSYPK----SLSKEAV 578 (683)
T ss_pred CCcceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHccCcCcc----cccHHHH
Confidence 445567899999999999975 78999999999999999999999999999999999999998877763 6899999
Q ss_pred HHHHHhcccCccccCCH-----HHHhcCcccCcCC
Q 042823 258 DLVRRMLTKDPKRRITA-----AQVLEHPWLRESG 287 (477)
Q Consensus 258 ~li~~~l~~dp~~R~s~-----~~~l~h~~~~~~~ 287 (477)
++++.+|.+.|.+|..+ .++-.||||+...
T Consensus 579 ~ickg~ltK~P~kRLGcg~~ge~di~~H~FFR~iD 613 (683)
T KOG0696|consen 579 AICKGLLTKHPGKRLGCGPEGERDIREHPFFRRID 613 (683)
T ss_pred HHHHHHhhcCCccccCCCCccccchhhCcchhhcc
Confidence 99999999999999864 6788899998654
|
|
| >cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-42 Score=328.21 Aligned_cols=250 Identities=21% Similarity=0.302 Sum_probs=210.8
Q ss_pred cccccccccccccCCeEEEEEEEccCC-----ceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeC
Q 042823 22 MLHYFFGRMLGRGQFGVSYLCTENSTN-----RPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDE 96 (477)
Q Consensus 22 ~~~Y~~~~~iG~G~~g~V~~~~~~~~~-----~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~ 96 (477)
..+|++.+.||+|+||.||+|.+...+ ..||+|.+.... .......+.+|+.++..+ +||||+++++++...
T Consensus 4 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~--~~~~~~~~~~ei~~l~~l-~h~~i~~~~~~~~~~ 80 (283)
T cd05048 4 LSAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENA--EPKVQQEFRQEAELMSDL-QHPNIVCLLGVCTKE 80 (283)
T ss_pred hHHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCC--CHHHHHHHHHHHHHHHhc-CCcccceEEEEEcCC
Confidence 357999999999999999999876554 679999886432 223456688999999998 799999999999999
Q ss_pred CeEEEEEeccCCCchHHHHHHc----------------CCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeec
Q 042823 97 TAVHVVMELCEGGDLFDRIIAK----------------GYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISR 160 (477)
Q Consensus 97 ~~~~lv~e~~~gg~L~~~l~~~----------------~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~ 160 (477)
...|++|||+++|+|.+++... ..+++.++..++.|++.||.|||++|++||||||+||++
T Consensus 81 ~~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nil~--- 157 (283)
T cd05048 81 QPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHHFVHRDLAARNCLV--- 157 (283)
T ss_pred CceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccccceEEE---
Confidence 9999999999999999999764 457888999999999999999999999999999999999
Q ss_pred CCCCCEEEeecCCccccCCCc---ceecccccccccchhhhh-hhcCCccchHhHHHHHHHHhh-CCCCCCCCChhhHHH
Q 042823 161 DDNALLKVTDFGSALLFEEGQ---VYRDIVGSGFYIAPEVLR-RRYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYD 235 (477)
Q Consensus 161 ~~~~~~kl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~l~t-g~~pf~~~~~~~~~~ 235 (477)
++++.+||+|||++....... ......+++.|+|||.+. +.++.++|||||||++|+|++ |..||.+....+...
T Consensus 158 ~~~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~~~~~ 237 (283)
T cd05048 158 GEGLTVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQEVIE 237 (283)
T ss_pred cCCCcEEECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Confidence 677889999999987643222 123345688899999875 568999999999999999998 999999888777777
Q ss_pred HHHcCCccCCCCCCCCCCHHHHHHHHHhcccCccccCCHHHHhcC
Q 042823 236 AILQGEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEH 280 (477)
Q Consensus 236 ~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h 280 (477)
.+..+..... ...+|+++.+|+.+||+.||.+||++.+++++
T Consensus 238 ~i~~~~~~~~---~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~ 279 (283)
T cd05048 238 MIRSRQLLPC---PEDCPARVYALMIECWNEIPARRPRFKDIHTR 279 (283)
T ss_pred HHHcCCcCCC---cccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 7766543321 24689999999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer |
| >PLN00009 cyclin-dependent kinase A; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-42 Score=329.93 Aligned_cols=260 Identities=28% Similarity=0.425 Sum_probs=209.8
Q ss_pred ccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 042823 23 LHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVV 102 (477)
Q Consensus 23 ~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~lv 102 (477)
++|++.+.||+|++|.||+|.++.+++.||+|.+..... .......+.+|+.+++++ +||||+++++++.+....|+|
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv 79 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQE-DEGVPSTAIREISLLKEM-QHGNIVRLQDVVHSEKRLYLV 79 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccc-cccchHHHHHHHHHHHhc-cCCCEeeEEEEEecCCeEEEE
Confidence 579999999999999999999999999999998865432 122335677899999999 799999999999999999999
Q ss_pred EeccCCCchHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCCC
Q 042823 103 MELCEGGDLFDRIIAKGY--NSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEG 180 (477)
Q Consensus 103 ~e~~~gg~L~~~l~~~~~--~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~ 180 (477)
|||+++ +|.+.+..... +++..+..++.||+.||.|||++|++||||+|+||++. ..+..+||+|||++......
T Consensus 80 ~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dl~p~nill~--~~~~~~kl~dfg~~~~~~~~ 156 (294)
T PLN00009 80 FEYLDL-DLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSHRVLHRDLKPQNLLID--RRTNALKLADFGLARAFGIP 156 (294)
T ss_pred Eecccc-cHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCcceEEEE--CCCCEEEEcccccccccCCC
Confidence 999964 88888766443 57888899999999999999999999999999999883 23457999999998754322
Q ss_pred -cceecccccccccchhhhhh--hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCcc--------------
Q 042823 181 -QVYRDIVGSGFYIAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEID-------------- 243 (477)
Q Consensus 181 -~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~-------------- 243 (477)
.......+++.|+|||++.+ .++.++||||+||++|+|+||.+||......+...++......
T Consensus 157 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (294)
T PLN00009 157 VRTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEETWPGVTSLPD 236 (294)
T ss_pred ccccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccccccchh
Confidence 22234467889999999864 4788999999999999999999999876655554443221000
Q ss_pred -------CCC----CCCCCCCHHHHHHHHHhcccCccccCCHHHHhcCcccCcCC
Q 042823 244 -------FDT----DPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESG 287 (477)
Q Consensus 244 -------~~~----~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~~ 287 (477)
+.. ...+.+++.+.++|.+||+.+|++||++.++++||||....
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~~~~~~~~~ 291 (294)
T PLN00009 237 YKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALEHEYFKDLG 291 (294)
T ss_pred hhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhcCchHhHHh
Confidence 000 01245789999999999999999999999999999998654
|
|
| >cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-42 Score=331.15 Aligned_cols=256 Identities=28% Similarity=0.469 Sum_probs=210.8
Q ss_pred ccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 042823 23 LHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVV 102 (477)
Q Consensus 23 ~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~lv 102 (477)
++|++.+.||+|+||.||+|.++.+++.||+|++..... .......+.+|+++++.+ +||||+++++++..++..|+|
T Consensus 1 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~-~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~iv 78 (288)
T cd07833 1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESED-DEDVKKTALREVKVLRQL-RHENIVNLKEAFRRKGRLYLV 78 (288)
T ss_pred CceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcc-cccchhHHHHHHHHHHhc-CCCCeeehhheEEECCEEEEE
Confidence 479999999999999999999999999999998865432 223446788999999999 699999999999999999999
Q ss_pred EeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCCCc-
Q 042823 103 MELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQ- 181 (477)
Q Consensus 103 ~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~- 181 (477)
|||++++.+..+..+...+++.++..++.||+.||.|||++|++||||+|+||++ +.++.+||+|||++.......
T Consensus 79 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~ni~~---~~~~~~kl~d~g~~~~~~~~~~ 155 (288)
T cd07833 79 FEYVERTLLELLEASPGGLPPDAVRSYIWQLLQAIAYCHSHNIIHRDIKPENILV---SESGVLKLCDFGFARALRARPA 155 (288)
T ss_pred EecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEE---CCCCCEEEEeeecccccCCCcc
Confidence 9999987776666666678999999999999999999999999999999999999 678899999999987765433
Q ss_pred -ceecccccccccchhhhhh--hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCc----------------
Q 042823 182 -VYRDIVGSGFYIAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEI---------------- 242 (477)
Q Consensus 182 -~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~---------------- 242 (477)
......+++.|+|||++.+ .++.++||||+|+++|+|++|.+||.+.........+.....
T Consensus 156 ~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (288)
T cd07833 156 SPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFSSNPRF 235 (288)
T ss_pred ccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhhhcccCccc
Confidence 3344678899999999864 578899999999999999999999987655443333221000
Q ss_pred ---cCCCC--------CCC-CCCHHHHHHHHHhcccCccccCCHHHHhcCccc
Q 042823 243 ---DFDTD--------PWP-SISSTAKDLVRRMLTKDPKRRITAAQVLEHPWL 283 (477)
Q Consensus 243 ---~~~~~--------~~~-~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~ 283 (477)
.++.. .++ .+++++++||++||..+|++|||+.++++||||
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~f 288 (288)
T cd07833 236 AGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQHPYF 288 (288)
T ss_pred cccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhcCCCC
Confidence 00000 011 248899999999999999999999999999997
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning |
| >cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-41 Score=328.43 Aligned_cols=262 Identities=26% Similarity=0.398 Sum_probs=219.6
Q ss_pred cccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCC
Q 042823 18 YEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDET 97 (477)
Q Consensus 18 ~~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~ 97 (477)
...+...|...+.||+|+||.||+|.+..++..+|+|.+.............+.+|+++++.+ +|||++++++++..+.
T Consensus 20 ~~~~~~~f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~ 98 (317)
T cd06635 20 KEDPEKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRI-KHPNSIEYKGCYLREH 98 (317)
T ss_pred CCCchhhhhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhC-CCCCEEEEEEEEeeCC
Confidence 356666799999999999999999999999999999998754333334456788899999999 7999999999999999
Q ss_pred eEEEEEeccCCCchHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccc
Q 042823 98 AVHVVMELCEGGDLFDRIIA-KGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALL 176 (477)
Q Consensus 98 ~~~lv~e~~~gg~L~~~l~~-~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~ 176 (477)
..|+||||+.| +|.+.+.. ...+++.++..++.|++.||.|||++|++||||+|+||++ +..+.+||+|||++..
T Consensus 99 ~~~lv~e~~~g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~dL~p~Nil~---~~~~~~kl~dfg~~~~ 174 (317)
T cd06635 99 TAWLVMEYCLG-SASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILL---TEPGQVKLADFGSASI 174 (317)
T ss_pred eEEEEEeCCCC-CHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcccEEE---CCCCCEEEecCCCccc
Confidence 99999999975 77777754 4568999999999999999999999999999999999999 6778899999998875
Q ss_pred cCCCcceecccccccccchhhhh----hhcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCCC
Q 042823 177 FEEGQVYRDIVGSGFYIAPEVLR----RRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSI 252 (477)
Q Consensus 177 ~~~~~~~~~~~gt~~y~aPE~~~----~~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 252 (477)
.... ....|++.|+|||.+. +.++.++||||+||++|+|++|.+||...........+........ ....+
T Consensus 175 ~~~~---~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~ 249 (317)
T cd06635 175 ASPA---NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPTL--QSNEW 249 (317)
T ss_pred cCCc---ccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhccCCCC--CCccc
Confidence 4432 3446889999999973 4588899999999999999999999988766666666555433221 22357
Q ss_pred CHHHHHHHHHhcccCccccCCHHHHhcCcccCcCCCC
Q 042823 253 SSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEA 289 (477)
Q Consensus 253 ~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~~~~ 289 (477)
++.+++++.+||+.+|.+||++.++++|+|+......
T Consensus 250 ~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~~~~ 286 (317)
T cd06635 250 SDYFRNFVDSCLQKIPQDRPTSEELLKHMFVLRERPE 286 (317)
T ss_pred cHHHHHHHHHHccCCcccCcCHHHHHhChhhhccCcc
Confidence 8899999999999999999999999999999765543
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron |
| >cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.8e-43 Score=330.72 Aligned_cols=256 Identities=28% Similarity=0.403 Sum_probs=213.7
Q ss_pred ccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEE
Q 042823 21 VMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVH 100 (477)
Q Consensus 21 ~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~ 100 (477)
..+.|+..+.||+|+||.||+|.+..++..||+|.+..... ......+.+|+.++..+ +||||+++++++..+...|
T Consensus 2 ~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~ 78 (277)
T cd06642 2 PEELFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEA--EDEIEDIQQEITVLSQC-DSPYITRYYGSYLKGTKLW 78 (277)
T ss_pred hHHHHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccc--hHHHHHHHHHHHHHHcC-CCCccHhhhcccccCCceE
Confidence 34678899999999999999999999999999998864432 23456788999999998 7999999999999999999
Q ss_pred EEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCCC
Q 042823 101 VVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEG 180 (477)
Q Consensus 101 lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~ 180 (477)
+||||++|++|.+++.. +.+++..+..++.|++.||.|||++|++|+||+|+||++ +.++.++|+|||++......
T Consensus 79 lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~ivH~dl~p~ni~i---~~~~~~~l~dfg~~~~~~~~ 154 (277)
T cd06642 79 IIMEYLGGGSALDLLKP-GPLEETYIATILREILKGLDYLHSERKIHRDIKAANVLL---SEQGDVKLADFGVAGQLTDT 154 (277)
T ss_pred EEEEccCCCcHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHhcCCeeccCCChheEEE---eCCCCEEEccccccccccCc
Confidence 99999999999988754 568999999999999999999999999999999999999 66788999999998765433
Q ss_pred cc-eecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCCCCHHHHH
Q 042823 181 QV-YRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKD 258 (477)
Q Consensus 181 ~~-~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 258 (477)
.. .....|+..|+|||++.+ .++.++|+|||||++|+|++|.+||...........+...... .....++..+.+
T Consensus 155 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~ 231 (277)
T cd06642 155 QIKRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLIPKNSPP---TLEGQYSKPFKE 231 (277)
T ss_pred chhhhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhhHHhhhhcCCCC---CCCcccCHHHHH
Confidence 21 223468889999999865 5788999999999999999999999765554444433332211 111356889999
Q ss_pred HHHHhcccCccccCCHHHHhcCcccCcC
Q 042823 259 LVRRMLTKDPKRRITAAQVLEHPWLRES 286 (477)
Q Consensus 259 li~~~l~~dp~~R~s~~~~l~h~~~~~~ 286 (477)
+|.+||+.+|++|||+.++++|||+...
T Consensus 232 li~~~l~~~p~~Rp~~~~il~~~~~~~~ 259 (277)
T cd06642 232 FVEACLNKDPRFRPTAKELLKHKFITRY 259 (277)
T ss_pred HHHHHccCCcccCcCHHHHHHhHHHHHH
Confidence 9999999999999999999999998654
|
Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 |
| >KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-44 Score=340.82 Aligned_cols=258 Identities=28% Similarity=0.487 Sum_probs=235.7
Q ss_pred ccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 042823 23 LHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVV 102 (477)
Q Consensus 23 ~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~lv 102 (477)
.+..++..||-||||.|-++..+.....+|+|++++.........+.+..|-+++... +.|.||++|..|.++.++|++
T Consensus 420 ~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~-~s~fIvrLYrTfrd~kyvYmL 498 (732)
T KOG0614|consen 420 SDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMEC-RSDFIVRLYRTFRDSKYVYML 498 (732)
T ss_pred hhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhc-CchHHHHHHHHhccchhhhhh
Confidence 3456778899999999999887666666999999887766666778889999999999 599999999999999999999
Q ss_pred EeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCCCcc
Q 042823 103 MELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQV 182 (477)
Q Consensus 103 ~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~ 182 (477)
||-|-||.|+..+..++.+.+..++.++..+++|++|||++|||.|||||+|.++ +..|.+||.|||+|+.+..+..
T Consensus 499 mEaClGGElWTiLrdRg~Fdd~tarF~~acv~EAfeYLH~k~iIYRDLKPENllL---d~~Gy~KLVDFGFAKki~~g~K 575 (732)
T KOG0614|consen 499 MEACLGGELWTILRDRGSFDDYTARFYVACVLEAFEYLHRKGIIYRDLKPENLLL---DNRGYLKLVDFGFAKKIGSGRK 575 (732)
T ss_pred HHhhcCchhhhhhhhcCCcccchhhhhHHHHHHHHHHHHhcCceeccCChhheee---ccCCceEEeehhhHHHhccCCc
Confidence 9999999999999999999999999999999999999999999999999999988 8899999999999999999988
Q ss_pred eecccccccccchhhhh-hhcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCCCCHHHHHHHH
Q 042823 183 YRDIVGSGFYIAPEVLR-RRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVR 261 (477)
Q Consensus 183 ~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~ 261 (477)
..+++|||.|.|||++. ..++.++|.||||+++|||++|.+||.+.++...+..|++|.-.+..+ ..++..+.++|+
T Consensus 576 TwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpmktYn~ILkGid~i~~P--r~I~k~a~~Lik 653 (732)
T KOG0614|consen 576 TWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPMKTYNLILKGIDKIEFP--RRITKTATDLIK 653 (732)
T ss_pred eeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHhhhhhhhcc--cccchhHHHHHH
Confidence 99999999999999975 568999999999999999999999999999999999999987544332 468899999999
Q ss_pred HhcccCccccCC-----HHHHhcCcccCcC
Q 042823 262 RMLTKDPKRRIT-----AAQVLEHPWLRES 286 (477)
Q Consensus 262 ~~l~~dp~~R~s-----~~~~l~h~~~~~~ 286 (477)
++...+|.+|.. +.++-+|.||...
T Consensus 654 ~LCr~~P~ERLG~~~~gI~DIkkH~Wf~gf 683 (732)
T KOG0614|consen 654 KLCRDNPTERLGYQKGGINDIKKHRWFEGF 683 (732)
T ss_pred HHHhcCcHhhhccccCChHHHHhhhhhhcC
Confidence 999999999986 8999999999764
|
|
| >cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-42 Score=338.51 Aligned_cols=261 Identities=30% Similarity=0.423 Sum_probs=211.8
Q ss_pred cccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeC---
Q 042823 20 DVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDE--- 96 (477)
Q Consensus 20 ~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~--- 96 (477)
.+..+|.+.+.||+|+||+||+|.+..+++.||+|.+..... .......+.+|+.++..+ +||||+++++++...
T Consensus 2 ~~~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~ni~~~~~~~~~~~~~ 79 (337)
T cd07858 2 EVDTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFD-NRIDAKRTLREIKLLRHL-DHENVIAIKDIMPPPHRE 79 (337)
T ss_pred ccccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEeccccc-ccchhHHHHHHHHHHHhc-CCCCccchHHheeccccc
Confidence 356789999999999999999999999999999999865322 222345667899999998 799999999988644
Q ss_pred --CeEEEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCc
Q 042823 97 --TAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSA 174 (477)
Q Consensus 97 --~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a 174 (477)
..+|+|+||+. ++|.+++...+.+++..+..++.|++.||.|||+++++||||||+||++ +.++.+||+|||++
T Consensus 80 ~~~~~~lv~e~~~-~~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dlkp~Nil~---~~~~~~kL~Dfg~~ 155 (337)
T cd07858 80 AFNDVYIVYELMD-TDLHQIIRSSQTLSDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLL---NANCDLKICDFGLA 155 (337)
T ss_pred ccCcEEEEEeCCC-CCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEE---cCCCCEEECcCccc
Confidence 35899999996 5899999888889999999999999999999999999999999999999 67788999999998
Q ss_pred cccCCC-cceecccccccccchhhhh--hhcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcC-----------
Q 042823 175 LLFEEG-QVYRDIVGSGFYIAPEVLR--RRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQG----------- 240 (477)
Q Consensus 175 ~~~~~~-~~~~~~~gt~~y~aPE~~~--~~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~----------- 240 (477)
...... .......++..|+|||.+. ..++.++|||||||++|+|++|.+||.+.+.......+...
T Consensus 156 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (337)
T cd07858 156 RTTSEKGDFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEEDLGF 235 (337)
T ss_pred cccCCCcccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCChHHhhh
Confidence 765433 2223456889999999875 35889999999999999999999999765433222221110
Q ss_pred ------------CccCC----CCCCCCCCHHHHHHHHHhcccCccccCCHHHHhcCcccCcC
Q 042823 241 ------------EIDFD----TDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRES 286 (477)
Q Consensus 241 ------------~~~~~----~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~ 286 (477)
..... ...++.+++++.++|.+||+.+|++|||+.++++||||...
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~~~~~ 297 (337)
T cd07858 236 IRNEKARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYLASL 297 (337)
T ss_pred cCchhhhHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcCcchhhh
Confidence 00000 01235688999999999999999999999999999999754
|
Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati |
| >cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-41 Score=328.14 Aligned_cols=259 Identities=27% Similarity=0.416 Sum_probs=216.6
Q ss_pred ccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCe
Q 042823 19 EDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETA 98 (477)
Q Consensus 19 ~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~ 98 (477)
..+.+.|...+.||+|+||+||+|.+..++..||+|++.............+.+|+.++..+ +|||++++++++.+...
T Consensus 17 ~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~ 95 (313)
T cd06633 17 DDPEEIFVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQL-KHPNTIEYKGCYLKEHT 95 (313)
T ss_pred CCHHHHhhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhC-CCCCCccEEEEEEeCCE
Confidence 45556688889999999999999999999999999998765443334456678899999999 79999999999999999
Q ss_pred EEEEEeccCCCchHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCcccc
Q 042823 99 VHVVMELCEGGDLFDRIIA-KGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLF 177 (477)
Q Consensus 99 ~~lv~e~~~gg~L~~~l~~-~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~ 177 (477)
.|+||||+.| +|.+.+.. ...+++.++..++.||+.||.|||++|++||||+|+||++ +.++.+||+|||++...
T Consensus 96 ~~lv~e~~~~-~l~~~l~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dl~p~nili---~~~~~~kL~dfg~~~~~ 171 (313)
T cd06633 96 AWLVMEYCLG-SASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILL---TEPGQVKLADFGSASKS 171 (313)
T ss_pred EEEEEecCCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChhhEEE---CCCCCEEEeecCCCccc
Confidence 9999999965 78777765 4568999999999999999999999999999999999999 67788999999988643
Q ss_pred CCCcceecccccccccchhhhh----hhcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCCCC
Q 042823 178 EEGQVYRDIVGSGFYIAPEVLR----RRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSIS 253 (477)
Q Consensus 178 ~~~~~~~~~~gt~~y~aPE~~~----~~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 253 (477)
.. .....|+..|+|||++. +.++.++|||||||++|+|++|.+||...........+.....+ ....+.++
T Consensus 172 ~~---~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 246 (313)
T cd06633 172 SP---ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNDSP--TLQSNEWT 246 (313)
T ss_pred CC---CCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCC--CCCccccC
Confidence 32 23457899999999974 45788999999999999999999999877665555555443322 12224567
Q ss_pred HHHHHHHHHhcccCccccCCHHHHhcCcccCcCC
Q 042823 254 STAKDLVRRMLTKDPKRRITAAQVLEHPWLRESG 287 (477)
Q Consensus 254 ~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~~ 287 (477)
..+++|+.+||+.+|.+||++.++++||||+...
T Consensus 247 ~~l~~li~~~l~~~P~~Rp~~~~~l~~~~~~~~~ 280 (313)
T cd06633 247 DSFRGFVDYCLQKIPQERPASAELLRHDFVRRDR 280 (313)
T ss_pred HHHHHHHHHHccCChhhCcCHHHHhcCcccCCCc
Confidence 8899999999999999999999999999998754
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co |
| >cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-42 Score=337.71 Aligned_cols=260 Identities=31% Similarity=0.447 Sum_probs=207.3
Q ss_pred cccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeC---
Q 042823 20 DVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDE--- 96 (477)
Q Consensus 20 ~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~--- 96 (477)
.+.++|++.+.||+|+||.||+|.+..+|+.||+|.+.... .......+.+|+.++..+ +||||+++++++...
T Consensus 2 ~~~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~ 78 (336)
T cd07849 2 DVGPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFE--HQTFCQRTLREIKILRRF-KHENIIGILDIIRPPSFE 78 (336)
T ss_pred ccccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccc--cchhHHHHHHHHHHHHhC-CCCCcCchhheeeccccc
Confidence 35679999999999999999999999999999999985322 123345577899999999 699999999887543
Q ss_pred --CeEEEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCc
Q 042823 97 --TAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSA 174 (477)
Q Consensus 97 --~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a 174 (477)
...|+|+||+.+ +|.+++. ...+++..+..++.|++.||.|||++||+||||||+||++ +..+.+||+|||++
T Consensus 79 ~~~~~~lv~e~~~~-~l~~~~~-~~~l~~~~~~~i~~ql~~aL~~LH~~~ivH~dlkp~Nill---~~~~~~kl~dfg~~ 153 (336)
T cd07849 79 SFNDVYIVQELMET-DLYKLIK-TQHLSNDHIQYFLYQILRGLKYIHSANVLHRDLKPSNLLL---NTNCDLKICDFGLA 153 (336)
T ss_pred ccceEEEEehhccc-CHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEE---CCCCCEEECcccce
Confidence 358999999965 8877764 4568999999999999999999999999999999999999 77889999999998
Q ss_pred cccCCCc----ceecccccccccchhhhhh--hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHc---------
Q 042823 175 LLFEEGQ----VYRDIVGSGFYIAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQ--------- 239 (477)
Q Consensus 175 ~~~~~~~----~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~--------- 239 (477)
....... ......||+.|+|||.+.+ .++.++||||+||++|+|++|++||.+.........+..
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~~~~~~~~~~~~~~~~ 233 (336)
T cd07849 154 RIADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGVLGTPSQED 233 (336)
T ss_pred eeccccccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHH
Confidence 7653321 1123578999999998753 578899999999999999999999976543332221111
Q ss_pred ------CC-------ccCC-C----CCCCCCCHHHHHHHHHhcccCccccCCHHHHhcCcccCcCC
Q 042823 240 ------GE-------IDFD-T----DPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESG 287 (477)
Q Consensus 240 ------~~-------~~~~-~----~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~~ 287 (477)
.. .... . ...+.+++++.++|.+||+.+|++|||+.++++||||+...
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~hp~~~~~~ 299 (336)
T cd07849 234 LNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAHPYLEQYH 299 (336)
T ss_pred HHHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcCccccccC
Confidence 00 0000 0 01245688999999999999999999999999999998664
|
Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase |
| >cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-42 Score=324.14 Aligned_cols=250 Identities=35% Similarity=0.570 Sum_probs=215.0
Q ss_pred ccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEeccCCCc
Q 042823 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVVMELCEGGD 110 (477)
Q Consensus 31 iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~lv~e~~~gg~ 110 (477)
||+|+||.||+|.+..+++.+|+|++.............+.+|++++.++ +||||+++++.+..+...|+||||++|++
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 79 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQA-QSPYVVKLYYSFQGKKNLYLVMEYLPGGD 79 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhC-CCcchhHHHHheecCcEEEEEEecCCCCc
Confidence 68999999999999999999999998755433334566788999999999 69999999999999999999999999999
Q ss_pred hHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCCCc---------
Q 042823 111 LFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQ--------- 181 (477)
Q Consensus 111 L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~--------- 181 (477)
|.+++.+.+.+++..+..++.|++.||.|||+.|++||||+|+||++ +.++.++|+|||++.......
T Consensus 80 L~~~l~~~~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~di~~~nil~---~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~ 156 (265)
T cd05579 80 LASLLENVGSLDEDVARIYIAEIVLALEYLHSNGIIHRDLKPDNILI---DSNGHLKLTDFGLSKVGLVRRQINLNDDEK 156 (265)
T ss_pred HHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCeecCCCCHHHeEE---cCCCCEEEEecccchhcccCcccccccccc
Confidence 99999887889999999999999999999999999999999999999 778899999999887543221
Q ss_pred ceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCCCCHHHHHHH
Q 042823 182 VYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLV 260 (477)
Q Consensus 182 ~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li 260 (477)
......+++.|+|||.... .++.++||||||+++|+|++|..||...........+..+...++.. ..++..+.+++
T Consensus 157 ~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~i 234 (265)
T cd05579 157 EDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPEEIFQNILNGKIEWPED--VEVSDEAIDLI 234 (265)
T ss_pred cccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCcCCCcc--ccCCHHHHHHH
Confidence 1233467889999999864 47889999999999999999999998888777777776655443322 23589999999
Q ss_pred HHhcccCccccCCH---HHHhcCcccCcC
Q 042823 261 RRMLTKDPKRRITA---AQVLEHPWLRES 286 (477)
Q Consensus 261 ~~~l~~dp~~R~s~---~~~l~h~~~~~~ 286 (477)
.+||+.+|.+|||+ .++|+||||+..
T Consensus 235 ~~~l~~~p~~Rpt~~~~~~~l~~~~~~~~ 263 (265)
T cd05579 235 SKLLVPDPEKRLGAKSIEEIKNHPFFKGI 263 (265)
T ss_pred HHHhcCCHhhcCCCccHHHHhcCccccCC
Confidence 99999999999999 999999999753
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re |
| >cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.1e-42 Score=323.75 Aligned_cols=256 Identities=28% Similarity=0.415 Sum_probs=214.4
Q ss_pred cccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEE
Q 042823 22 MLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHV 101 (477)
Q Consensus 22 ~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~l 101 (477)
.+-|++.+.||+|+||.||+|.+..++..||+|++..... ......+.+|+.++..+ +||||+++++++..+...|+
T Consensus 3 ~~~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~l 79 (277)
T cd06641 3 EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEA--EDEIEDIQQEITVLSQC-DSPYVTKYYGSYLKDTKLWI 79 (277)
T ss_pred HHhhhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccc--hHHHHHHHHHHHHHHhc-CCCCEeEEEEEEEeCCeEEE
Confidence 3458889999999999999999988999999998764322 23346788899999998 79999999999999999999
Q ss_pred EEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCCCc
Q 042823 102 VMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQ 181 (477)
Q Consensus 102 v~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~ 181 (477)
||||+++++|.+++.. ..+++..+..++.|++.||.|||+.|++|+||+|+||++ +.++.++|+|||++.......
T Consensus 80 v~e~~~~~~l~~~i~~-~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~Ni~i---~~~~~~~l~dfg~~~~~~~~~ 155 (277)
T cd06641 80 IMEYLGGGSALDLLEP-GPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLL---SEHGEVKLADFGVAGQLTDTQ 155 (277)
T ss_pred EEEeCCCCcHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHccCCeecCCCCHHhEEE---CCCCCEEEeecccceecccch
Confidence 9999999999988764 468999999999999999999999999999999999999 677889999999887654322
Q ss_pred -ceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCCCCHHHHHH
Q 042823 182 -VYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDL 259 (477)
Q Consensus 182 -~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l 259 (477)
......|+..|+|||.+.+ .++.++|+||+||++|+|++|.+||...........+...... .....++.++.++
T Consensus 156 ~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~ 232 (277)
T cd06641 156 IKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPMKVLFLIPKNNPP---TLEGNYSKPLKEF 232 (277)
T ss_pred hhhccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchHHHHHHHhcCCCC---CCCcccCHHHHHH
Confidence 1233468889999999864 5788999999999999999999999776655555544333221 1123578899999
Q ss_pred HHHhcccCccccCCHHHHhcCcccCcCC
Q 042823 260 VRRMLTKDPKRRITAAQVLEHPWLRESG 287 (477)
Q Consensus 260 i~~~l~~dp~~R~s~~~~l~h~~~~~~~ 287 (477)
+.+||+.+|++||++.++++||||....
T Consensus 233 i~~~l~~~p~~Rp~~~~~l~~~~~~~~~ 260 (277)
T cd06641 233 VEACLNKEPSFRPTAKELLKHKFIVRFA 260 (277)
T ss_pred HHHHccCChhhCcCHHHHHhCHHHhhhh
Confidence 9999999999999999999999998753
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int |
| >cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-42 Score=323.92 Aligned_cols=251 Identities=27% Similarity=0.452 Sum_probs=208.7
Q ss_pred ccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 042823 23 LHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVV 102 (477)
Q Consensus 23 ~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~lv 102 (477)
++|.+.+.||+|+||.||+|.++.++..+|+|.+.............+.+|+.+++.+ +||||+++++++..++..++|
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~~v 80 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQL-NHPNVIKYYASFIEDNELNIV 80 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHc-cCCchhhhhheeEeCCeEEEE
Confidence 5799999999999999999999999999999988754444444556788999999999 799999999999999999999
Q ss_pred EeccCCCchHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccC
Q 042823 103 MELCEGGDLFDRIIA----KGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFE 178 (477)
Q Consensus 103 ~e~~~gg~L~~~l~~----~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~ 178 (477)
|||++|++|.+++.. ...+++..+..++.||+.||.|||++|++|+||||+||++ +.++.++|+|||++....
T Consensus 81 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili---~~~~~~~l~dfg~~~~~~ 157 (267)
T cd08229 81 LELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFI---TATGVVKLGDLGLGRFFS 157 (267)
T ss_pred EEecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE---cCCCCEEECcchhhhccc
Confidence 999999999998864 3467999999999999999999999999999999999999 677889999999887654
Q ss_pred CCc-ceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChh--hHHHHHHcCCccCCCCCCCCCCH
Q 042823 179 EGQ-VYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKK--GTYDAILQGEIDFDTDPWPSISS 254 (477)
Q Consensus 179 ~~~-~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~--~~~~~i~~~~~~~~~~~~~~~~~ 254 (477)
... ......|++.|+|||.+.+ .++.++|+||||+++|+|++|..||.+.... .....+... ..+..++..+++
T Consensus 158 ~~~~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 235 (267)
T cd08229 158 SKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQC--DYPPLPSDHYSE 235 (267)
T ss_pred cCCcccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccchHHHHhhhhhcC--CCCCCCcccccH
Confidence 322 2234578999999999864 5788999999999999999999999765432 222233222 222223345789
Q ss_pred HHHHHHHHhcccCccccCCHHHHhc
Q 042823 255 TAKDLVRRMLTKDPKRRITAAQVLE 279 (477)
Q Consensus 255 ~~~~li~~~l~~dp~~R~s~~~~l~ 279 (477)
.+++++.+||..+|++|||+.++++
T Consensus 236 ~~~~li~~~l~~~p~~Rpt~~~i~~ 260 (267)
T cd08229 236 ELRQLVNMCINPDPEKRPDITYVYD 260 (267)
T ss_pred HHHHHHHHhcCCCcccCCCHHHHHH
Confidence 9999999999999999999998764
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. |
| >PTZ00024 cyclin-dependent protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-42 Score=334.69 Aligned_cols=265 Identities=26% Similarity=0.375 Sum_probs=214.7
Q ss_pred cccccccc-cccccccCCeEEEEEEEccCCceEEEEEeecCCccchh-----------hHHHHHHHHHHHHhccCCCCee
Q 042823 20 DVMLHYFF-GRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLA-----------ENDMIRREIQIRLYLSGQPNVV 87 (477)
Q Consensus 20 ~~~~~Y~~-~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~-----------~~~~~~~e~~~~~~l~~hpniv 87 (477)
.+.++|.. .+.||+|+||+||+|.++.+++.||+|++......... ....+.+|+.++..+ +||||+
T Consensus 5 ~~~~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv 83 (335)
T PTZ00024 5 SISERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEI-KHENIM 83 (335)
T ss_pred ccccchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhC-CCccee
Confidence 46678875 57899999999999999999999999998654321100 112467899999999 799999
Q ss_pred EEEEEEEeCCeEEEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEE
Q 042823 88 EFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLK 167 (477)
Q Consensus 88 ~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~k 167 (477)
++++++..+...|+||||+. |+|.+++.....+++..+..++.|++.||.|||+.|++||||+|+||++ +..+.+|
T Consensus 84 ~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~~i~H~dl~~~nill---~~~~~~k 159 (335)
T PTZ00024 84 GLVDVYVEGDFINLVMDIMA-SDLKKVVDRKIRLTESQVKCILLQILNGLNVLHKWYFMHRDLSPANIFI---NSKGICK 159 (335)
T ss_pred eeeEEEecCCcEEEEEeccc-cCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHeEE---CCCCCEE
Confidence 99999999999999999997 5999999888889999999999999999999999999999999999999 6778999
Q ss_pred EeecCCccccCCC---------------cceecccccccccchhhhhh--hcCCccchHhHHHHHHHHhhCCCCCCCCCh
Q 042823 168 VTDFGSALLFEEG---------------QVYRDIVGSGFYIAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPFWAETK 230 (477)
Q Consensus 168 l~Dfg~a~~~~~~---------------~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~l~tg~~pf~~~~~ 230 (477)
|+|||++...... .......+++.|+|||.+.+ .++.++|||||||++|+|++|.+||.+...
T Consensus 160 l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~ 239 (335)
T PTZ00024 160 IADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENE 239 (335)
T ss_pred ECCccceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH
Confidence 9999988765411 11123356888999999864 368899999999999999999999988776
Q ss_pred hhHHHHHHcCCccCCC------------------------CCCCCCCHHHHHHHHHhcccCccccCCHHHHhcCcccCcC
Q 042823 231 KGTYDAILQGEIDFDT------------------------DPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRES 286 (477)
Q Consensus 231 ~~~~~~i~~~~~~~~~------------------------~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~ 286 (477)
...+..+......... ...+..+..+.++|.+||+.+|++|||++++|.||||+..
T Consensus 240 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~~~~~~~~ 319 (335)
T PTZ00024 240 IDQLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALKHEYFKSD 319 (335)
T ss_pred HHHHHHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHHhcCcccCCC
Confidence 6555444321100000 0113457889999999999999999999999999999876
Q ss_pred CCC
Q 042823 287 GEA 289 (477)
Q Consensus 287 ~~~ 289 (477)
...
T Consensus 320 ~~~ 322 (335)
T PTZ00024 320 PLP 322 (335)
T ss_pred CCC
Confidence 543
|
|
| >cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-42 Score=326.82 Aligned_cols=253 Identities=27% Similarity=0.451 Sum_probs=208.2
Q ss_pred cccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEE
Q 042823 24 HYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVVM 103 (477)
Q Consensus 24 ~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~lv~ 103 (477)
+|++.+.||.|++|.||+|.+..+|..||+|++...... .....+.+|+.++..+ +||||+++++++...+..|+||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~--~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~ 77 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEE--GTPSTAIREISLMKEL-KHENIVRLHDVIHTENKLMLVF 77 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccc--cchHHHHHHHHHHHhh-cCCCEeeeeeeEeeCCcEEEEE
Confidence 588999999999999999999999999999998754321 2234567899999999 7999999999999999999999
Q ss_pred eccCCCchHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCCC
Q 042823 104 ELCEGGDLFDRIIAK---GYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEG 180 (477)
Q Consensus 104 e~~~gg~L~~~l~~~---~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~ 180 (477)
||+++ +|.+++... ..+++..+..++.|++.||.|||+.|++||||||+||++ ++++.++|+|||++......
T Consensus 78 e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~h~dl~p~ni~~---~~~~~~~l~d~g~~~~~~~~ 153 (284)
T cd07836 78 EYMDK-DLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENRVLHRDLKPQNLLI---NKRGELKLADFGLARAFGIP 153 (284)
T ss_pred ecCCc-cHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEE---CCCCcEEEeecchhhhhcCC
Confidence 99986 888888754 358999999999999999999999999999999999998 67788999999988754332
Q ss_pred c-ceecccccccccchhhhhh--hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCc--------------c
Q 042823 181 Q-VYRDIVGSGFYIAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEI--------------D 243 (477)
Q Consensus 181 ~-~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~--------------~ 243 (477)
. ......+++.|+|||++.+ .++.++|||||||++|+|++|.+||.+.+..+....+..... .
T Consensus 154 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (284)
T cd07836 154 VNTFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGISQLPE 233 (284)
T ss_pred ccccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhHHHHhcCch
Confidence 1 2233467889999999864 468899999999999999999999987766555444332110 0
Q ss_pred CCC-----------CCCCCCCHHHHHHHHHhcccCccccCCHHHHhcCccc
Q 042823 244 FDT-----------DPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWL 283 (477)
Q Consensus 244 ~~~-----------~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~ 283 (477)
+.. ...+.+++.++++|.+||+.||.+||++.++++||||
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~~~f 284 (284)
T cd07836 234 YKPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQHPWF 284 (284)
T ss_pred hcccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhcCCCC
Confidence 000 0113468899999999999999999999999999997
|
Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. |
| >cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-42 Score=327.46 Aligned_cols=257 Identities=29% Similarity=0.540 Sum_probs=212.6
Q ss_pred cccccccccccCCeEEEEEEEc---cCCceEEEEEeecCCcc-chhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeE
Q 042823 24 HYFFGRMLGRGQFGVSYLCTEN---STNRPYACKSIAKKPKM-RLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAV 99 (477)
Q Consensus 24 ~Y~~~~~iG~G~~g~V~~~~~~---~~~~~~aiK~~~~~~~~-~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~ 99 (477)
.|++.+.||+|+||.||.|.+. .+|..||+|++...... .......+.+|++++..+.+||||++++++++.+..+
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKL 80 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeE
Confidence 4889999999999999999874 47899999998653221 1223456788999999997899999999999999999
Q ss_pred EEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCC
Q 042823 100 HVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEE 179 (477)
Q Consensus 100 ~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~ 179 (477)
|+||||+++++|.+++.....+++..+..++.|++.||.|||+.|++||||+|+||++ +.++.+||+|||++.....
T Consensus 81 ~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nil~---~~~~~~kl~dfg~~~~~~~ 157 (290)
T cd05613 81 HLILDYINGGELFTHLSQRERFKEQEVQIYSGEIVLALEHLHKLGIIYRDIKLENILL---DSNGHVVLTDFGLSKEFHE 157 (290)
T ss_pred EEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEE---CCCCCEEEeeCccceeccc
Confidence 9999999999999999988889999999999999999999999999999999999999 6778999999999876543
Q ss_pred Cc--ceecccccccccchhhhhh---hcCCccchHhHHHHHHHHhhCCCCCCCCChh----hHHHHHHcCCccCCCCCCC
Q 042823 180 GQ--VYRDIVGSGFYIAPEVLRR---RYGKEIDIWSAGVILYILLSGVPPFWAETKK----GTYDAILQGEIDFDTDPWP 250 (477)
Q Consensus 180 ~~--~~~~~~gt~~y~aPE~~~~---~~~~~~DiwslG~il~~l~tg~~pf~~~~~~----~~~~~i~~~~~~~~~~~~~ 250 (477)
.. ......|+..|+|||.+.. .++.++||||+|+++|+|++|..||...... .....+......+ .+
T Consensus 158 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~----~~ 233 (290)
T cd05613 158 DEVERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPY----PQ 233 (290)
T ss_pred ccccccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCccccHHHHHHHhhccCCCC----Cc
Confidence 22 1234568999999999863 4678999999999999999999999643322 2223333322222 23
Q ss_pred CCCHHHHHHHHHhcccCccccC-----CHHHHhcCcccCcCC
Q 042823 251 SISSTAKDLVRRMLTKDPKRRI-----TAAQVLEHPWLRESG 287 (477)
Q Consensus 251 ~~~~~~~~li~~~l~~dp~~R~-----s~~~~l~h~~~~~~~ 287 (477)
.+++.+.+++.+||+.+|++|| ++.+++.||||....
T Consensus 234 ~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~~ 275 (290)
T cd05613 234 EMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKKHPFFQKIN 275 (290)
T ss_pred cCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHcCcccccCC
Confidence 5789999999999999999997 899999999997653
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph |
| >cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-42 Score=338.02 Aligned_cols=262 Identities=28% Similarity=0.396 Sum_probs=212.5
Q ss_pred ccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEE----eC
Q 042823 21 VMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYE----DE 96 (477)
Q Consensus 21 ~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~----~~ 96 (477)
+.++|.+.+.||+|+||.||+|.++.+++.||+|++..... .......+.+|+.++..+ +||||+++++++. ..
T Consensus 3 ~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~-~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~ 80 (334)
T cd07855 3 VGSRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFD-VPTLAKRTLRELKILRHF-KHDNIIAIRDILRPPGADF 80 (334)
T ss_pred hhhceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccc-cccchHHHHHHHHHHHhc-CCCCccCHHHhccccCCCC
Confidence 45789999999999999999999999999999999875432 223345677899999999 6999999999885 34
Q ss_pred CeEEEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccc
Q 042823 97 TAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALL 176 (477)
Q Consensus 97 ~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~ 176 (477)
..+|+||||+. |+|.+++...+.+++..+..++.||+.||.|||++|++||||||+||++ +.++.+||+|||++..
T Consensus 81 ~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~Nil~---~~~~~~kl~dfg~~~~ 156 (334)
T cd07855 81 KDVYVVMDLME-SDLHHIIHSDQPLTEEHIRYFLYQLLRGLKYIHSANVIHRDLKPSNLLV---NEDCELRIGDFGMARG 156 (334)
T ss_pred ceEEEEEehhh-hhHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE---cCCCcEEeccccccee
Confidence 57899999996 5899998888889999999999999999999999999999999999998 7788999999999876
Q ss_pred cCCCc-----ceecccccccccchhhhhh--hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcC---------
Q 042823 177 FEEGQ-----VYRDIVGSGFYIAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQG--------- 240 (477)
Q Consensus 177 ~~~~~-----~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~--------- 240 (477)
..... ......|+..|+|||++.+ .++.++||||+||++|+|++|.+||.+.........+...
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~~~~~ 236 (334)
T cd07855 157 LSSSPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSEEVL 236 (334)
T ss_pred ecccCcCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCChhHhh
Confidence 53221 1124578999999999854 5889999999999999999999999776543332222110
Q ss_pred --------------CccCCCC----CCCCCCHHHHHHHHHhcccCccccCCHHHHhcCcccCcCCC
Q 042823 241 --------------EIDFDTD----PWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGE 288 (477)
Q Consensus 241 --------------~~~~~~~----~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~~~ 288 (477)
....... .++..++++.++|++||+.+|++|||+.+++.||||.....
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~~~~~~~ 302 (334)
T cd07855 237 NRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQHPFLAQYHD 302 (334)
T ss_pred hhhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhChhhhhccC
Confidence 0000111 12457899999999999999999999999999999976543
|
Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the |
| >cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-41 Score=323.22 Aligned_cols=259 Identities=27% Similarity=0.432 Sum_probs=208.4
Q ss_pred ccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEe--CCeEE
Q 042823 23 LHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYED--ETAVH 100 (477)
Q Consensus 23 ~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~--~~~~~ 100 (477)
++|...+.||.|++|.||+|.+..+++.+|+|.+..... ......+.+|++++..+ +||||+++++++.. ...+|
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~~~ 77 (287)
T cd06621 1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPN--PDLQKQILRELEINKSC-KSPYIVKYYGAFLDESSSSIG 77 (287)
T ss_pred CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCc--hHHHHHHHHHHHHHHhC-CCCCeeeeeeEEEccCCCeEE
Confidence 468889999999999999999999999999999875432 23456788999999998 79999999999864 44789
Q ss_pred EEEeccCCCchHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccc
Q 042823 101 VVMELCEGGDLFDRIIA----KGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALL 176 (477)
Q Consensus 101 lv~e~~~gg~L~~~l~~----~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~ 176 (477)
+||||++|++|.+++.. ...+++..+..++.||+.||.|||+.|++|+||+|+||++ +..+.++|+|||++..
T Consensus 78 lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~i~H~dl~~~nil~---~~~~~~~l~dfg~~~~ 154 (287)
T cd06621 78 IAMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRKIIHRDIKPSNILL---TRKGQVKLCDFGVSGE 154 (287)
T ss_pred EEEEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEE---ecCCeEEEeecccccc
Confidence 99999999999887653 3457899999999999999999999999999999999999 6677899999999865
Q ss_pred cCCCcceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCC-----hhhHHHHHHcCCccC-CCCCC
Q 042823 177 FEEGQVYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAET-----KKGTYDAILQGEIDF-DTDPW 249 (477)
Q Consensus 177 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~-----~~~~~~~i~~~~~~~-~~~~~ 249 (477)
..... .....++..|+|||.+.+ .++.++|||||||++|+|++|..||.... ..+....+....... .....
T Consensus 155 ~~~~~-~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (287)
T cd06621 155 LVNSL-AGTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVNMPNPELKDEPG 233 (287)
T ss_pred ccccc-cccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhcCCchhhccCCC
Confidence 43322 123467889999999864 68899999999999999999999997652 223333333322111 11110
Q ss_pred --CCCCHHHHHHHHHhcccCccccCCHHHHhcCcccCcCCC
Q 042823 250 --PSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGE 288 (477)
Q Consensus 250 --~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~~~ 288 (477)
...++.+.+||.+||..+|++|||+.++++||||+....
T Consensus 234 ~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~~~~~~~~~~ 274 (287)
T cd06621 234 NGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLEHPWIKAQMK 274 (287)
T ss_pred CCCchHHHHHHHHHHHcCCCcccCCCHHHHHhCcccccccc
Confidence 134678999999999999999999999999999966543
|
Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-41 Score=325.47 Aligned_cols=261 Identities=26% Similarity=0.398 Sum_probs=216.4
Q ss_pred cccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeE
Q 042823 20 DVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAV 99 (477)
Q Consensus 20 ~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~ 99 (477)
.....|...+.||+|+||.||+|+++.++..+|+|.+.............+.+|+.+++.+ +|||++++++++......
T Consensus 12 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~ 90 (308)
T cd06634 12 DPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKL-RHPNTIQYRGCYLREHTA 90 (308)
T ss_pred CcHHHHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhC-CCCCcccEEEEEEcCCee
Confidence 3555688999999999999999999999999999998654333333445677899999999 799999999999999999
Q ss_pred EEEEeccCCCchHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccC
Q 042823 100 HVVMELCEGGDLFDRIIA-KGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFE 178 (477)
Q Consensus 100 ~lv~e~~~gg~L~~~l~~-~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~ 178 (477)
|+||||+. |+|.+.+.. ...+++..+..++.|++.||.|||+.+++||||+|+||++ +.++.+||+|||++....
T Consensus 91 ~lv~e~~~-~~l~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nil~---~~~~~~kl~dfg~~~~~~ 166 (308)
T cd06634 91 WLVMEYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILL---SEPGLVKLGDFGSASIMA 166 (308)
T ss_pred EEEEEccC-CCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHhEEE---CCCCcEEECCcccceeec
Confidence 99999997 588777754 4568999999999999999999999999999999999999 667889999999887654
Q ss_pred CCcceecccccccccchhhhh----hhcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCCCCH
Q 042823 179 EGQVYRDIVGSGFYIAPEVLR----RRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISS 254 (477)
Q Consensus 179 ~~~~~~~~~gt~~y~aPE~~~----~~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 254 (477)
.. ....|++.|+|||.+. +.++.++|||||||++|+|++|..||...........+..+..... ....++.
T Consensus 167 ~~---~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 241 (308)
T cd06634 167 PA---NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPAL--QSGHWSE 241 (308)
T ss_pred Cc---ccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHHHHHHHhhcCCCCc--CcccccH
Confidence 32 2346889999999974 3578899999999999999999999977665555555544433221 1235788
Q ss_pred HHHHHHHHhcccCccccCCHHHHhcCcccCcCCCCC
Q 042823 255 TAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEAS 290 (477)
Q Consensus 255 ~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~~~~~ 290 (477)
.++++|.+||..+|++||++.++++|||+.......
T Consensus 242 ~~~~li~~cl~~~P~~Rp~~~~ll~~~~~~~~~~~~ 277 (308)
T cd06634 242 YFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRERPPT 277 (308)
T ss_pred HHHHHHHHHhhCCcccCCCHHHHhhCccccccCChh
Confidence 999999999999999999999999999998765433
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin |
| >cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-42 Score=327.54 Aligned_cols=262 Identities=28% Similarity=0.454 Sum_probs=215.5
Q ss_pred ccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEE
Q 042823 21 VMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVH 100 (477)
Q Consensus 21 ~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~ 100 (477)
..++|.+.+.||+|+||.||++.+..+++.||+|.+..... .....+.+|+.+++.+ +||||+++++++......|
T Consensus 17 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~---~~~~~~~~e~~~l~~l-~hp~i~~~~~~~~~~~~~~ 92 (293)
T cd06647 17 PKKKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQ---PKKELIINEILVMREN-KHPNIVNYLDSYLVGDELW 92 (293)
T ss_pred chhhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccc---hHHHHHHHHHHHHhhc-CCCCeeehhheeeeCCcEE
Confidence 35799999999999999999999988999999999854322 2345678899999998 6999999999999999999
Q ss_pred EEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCCC
Q 042823 101 VVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEG 180 (477)
Q Consensus 101 lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~ 180 (477)
+|+||++|++|.+++.+. .+++.++..++.|++.||.|||++|++||||+|+||++ +..+.+||+|||++......
T Consensus 93 lv~e~~~~~~L~~~~~~~-~l~~~~~~~i~~~l~~al~~LH~~gi~H~dL~p~Nili---~~~~~~kL~dfg~~~~~~~~ 168 (293)
T cd06647 93 VVMEYLAGGSLTDVVTET-CMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILL---GMDGSVKLTDFGFCAQITPE 168 (293)
T ss_pred EEEecCCCCcHHHHHhhc-CCCHHHHHHHHHHHHHHHHHHHhCCEeeccCCHHHEEE---cCCCCEEEccCcceeccccc
Confidence 999999999999988654 57899999999999999999999999999999999999 67788999999988655433
Q ss_pred cc-eecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCCCCHHHHH
Q 042823 181 QV-YRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKD 258 (477)
Q Consensus 181 ~~-~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 258 (477)
.. .....|++.|+|||.+.. .++.++|+|||||++|++++|..||...+.......+...... ....+..++..+++
T Consensus 169 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~ 247 (293)
T cd06647 169 QSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTP-ELQNPEKLSAIFRD 247 (293)
T ss_pred ccccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhheeehhcCCCC-CCCCccccCHHHHH
Confidence 22 233468899999998764 5788999999999999999999999766544333322222111 11123357889999
Q ss_pred HHHHhcccCccccCCHHHHhcCcccCcCCCCCC
Q 042823 259 LVRRMLTKDPKRRITAAQVLEHPWLRESGEASD 291 (477)
Q Consensus 259 li~~~l~~dp~~R~s~~~~l~h~~~~~~~~~~~ 291 (477)
+|.+||..+|++||++.+++.||||+.....+.
T Consensus 248 li~~~l~~~p~~Rp~~~~il~h~~~~~~~~~~~ 280 (293)
T cd06647 248 FLNRCLEMDVEKRGSAKELLQHPFLKIAKPLSS 280 (293)
T ss_pred HHHHHccCChhhCcCHHHHhcCHHHhcCccccc
Confidence 999999999999999999999999987654433
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi |
| >cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-42 Score=332.85 Aligned_cols=258 Identities=31% Similarity=0.477 Sum_probs=202.4
Q ss_pred cccccccccccCCeEEEEEEEcc--CCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeC--CeE
Q 042823 24 HYFFGRMLGRGQFGVSYLCTENS--TNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDE--TAV 99 (477)
Q Consensus 24 ~Y~~~~~iG~G~~g~V~~~~~~~--~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~--~~~ 99 (477)
+|++.+.||+|+||.||+|.+.. +++.||+|.+.............+.+|+.++..+ +||||+++++++.+. ..+
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~~ 79 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLREL-KHENVVSLVEVFLEHADKSV 79 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhc-CCCCccceEEEEeCCCCceE
Confidence 58899999999999999999988 8999999998764311222335567899999999 799999999999988 889
Q ss_pred EEEEeccCCCchHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeec-CCCCCEEEeecCC
Q 042823 100 HVVMELCEGGDLFDRIIAK-----GYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISR-DDNALLKVTDFGS 173 (477)
Q Consensus 100 ~lv~e~~~gg~L~~~l~~~-----~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~-~~~~~~kl~Dfg~ 173 (477)
|+||||+++ +|.+.+... ..+++..++.++.|++.||.|||+.+++||||||+||++... +..+.+||+|||+
T Consensus 80 ~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg~ 158 (316)
T cd07842 80 YLLFDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNWVLHRDLKPANILVMGEGPERGVVKIGDLGL 158 (316)
T ss_pred EEEEeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEEcCCCCccceEEECCCcc
Confidence 999999975 777766532 367999999999999999999999999999999999999321 1178999999999
Q ss_pred ccccCCCcc----eecccccccccchhhhhh--hcCCccchHhHHHHHHHHhhCCCCCCCCChhh---------HHHHHH
Q 042823 174 ALLFEEGQV----YRDIVGSGFYIAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPFWAETKKG---------TYDAIL 238 (477)
Q Consensus 174 a~~~~~~~~----~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~---------~~~~i~ 238 (477)
+........ .....+++.|+|||++.+ .++.++|||||||++|+|++|.+||.+..... ....+.
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (316)
T cd07842 159 ARLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLERIF 238 (316)
T ss_pred ccccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHHHHHH
Confidence 876533221 233467889999998864 47899999999999999999999997654322 011110
Q ss_pred cCC----------------c-----cCCCCCCC------------CCCHHHHHHHHHhcccCccccCCHHHHhcCccc
Q 042823 239 QGE----------------I-----DFDTDPWP------------SISSTAKDLVRRMLTKDPKRRITAAQVLEHPWL 283 (477)
Q Consensus 239 ~~~----------------~-----~~~~~~~~------------~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~ 283 (477)
... . .......+ ..+..+.+++.+||+.||++|||+.++++||||
T Consensus 239 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~~~~f 316 (316)
T cd07842 239 EVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALEHPYF 316 (316)
T ss_pred HHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhcCCCC
Confidence 000 0 00001111 567889999999999999999999999999997
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the |
| >cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-42 Score=327.07 Aligned_cols=254 Identities=27% Similarity=0.378 Sum_probs=202.3
Q ss_pred ccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 042823 23 LHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVV 102 (477)
Q Consensus 23 ~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~lv 102 (477)
.+|++.+.||+|+||.||+|.++.+++.||+|++...... .....+.+|+.+++.+ +||||+++++++..+...|+|
T Consensus 5 ~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~--~~~~~~~~e~~~l~~l-~h~ni~~~~~~~~~~~~~~lv 81 (291)
T cd07870 5 TSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEE--GVPFTAIREASLLKGL-KHANIVLLHDIIHTKETLTFV 81 (291)
T ss_pred ceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcC--CCcHHHHHHHHHHHhc-CCCCEeEEEEEEecCCeEEEE
Confidence 6899999999999999999999999999999998654322 1223566899999998 799999999999999999999
Q ss_pred EeccCCCchHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCCC-
Q 042823 103 MELCEGGDLFDRIIA-KGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEG- 180 (477)
Q Consensus 103 ~e~~~gg~L~~~l~~-~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~- 180 (477)
|||+. ++|.+++.. ...+++..+..++.|++.||.|||++|++||||||+||++ +..+.+||+|||++......
T Consensus 82 ~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nil~---~~~~~~~l~Dfg~~~~~~~~~ 157 (291)
T cd07870 82 FEYMH-TDLAQYMIQHPGGLHPYNVRLFMFQLLRGLAYIHGQHILHRDLKPQNLLI---SYLGELKLADFGLARAKSIPS 157 (291)
T ss_pred Eeccc-CCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEE---cCCCcEEEeccccccccCCCC
Confidence 99996 577777655 3567888999999999999999999999999999999999 67788999999988754322
Q ss_pred cceecccccccccchhhhhh--hcCCccchHhHHHHHHHHhhCCCCCCCCChh-hHHHHHHcC--------------Ccc
Q 042823 181 QVYRDIVGSGFYIAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPFWAETKK-GTYDAILQG--------------EID 243 (477)
Q Consensus 181 ~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~l~tg~~pf~~~~~~-~~~~~i~~~--------------~~~ 243 (477)
.......+++.|+|||++.+ .++.++|||||||++|+|++|.+||.+.... +.+..+... ...
T Consensus 158 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (291)
T cd07870 158 QTYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTWPGVSKLPN 237 (291)
T ss_pred CCCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHcCCCChhhhhhhhhccc
Confidence 22234467899999999864 4788999999999999999999999765432 111111100 000
Q ss_pred CCC------------CCCC--CCCHHHHHHHHHhcccCccccCCHHHHhcCccc
Q 042823 244 FDT------------DPWP--SISSTAKDLVRRMLTKDPKRRITAAQVLEHPWL 283 (477)
Q Consensus 244 ~~~------------~~~~--~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~ 283 (477)
+.. ..|. ..++.+.+++.+||..||.+|||+.+++.||||
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~h~~~ 291 (291)
T cd07870 238 YKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALLHPYF 291 (291)
T ss_pred ccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhcCCCC
Confidence 000 0011 136789999999999999999999999999997
|
Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess |
| >cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-42 Score=327.34 Aligned_cols=253 Identities=28% Similarity=0.425 Sum_probs=207.9
Q ss_pred ccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEe
Q 042823 25 YFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVVME 104 (477)
Q Consensus 25 Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~lv~e 104 (477)
|++.+.||.|++|.||+|.++.+|+.||+|++..... .......+.+|+.+++.+ +|||++++++++.+....|+|||
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~E~~~l~~l-~~~~iv~~~~~~~~~~~~~iv~e 78 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETE-DEGVPSTAIREISLLKEL-NHPNIVRLLDVVHSENKLYLVFE 78 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccc-cccchhHHHHHHHHHHhc-CCCCccCHhheeccCCeEEEEEe
Confidence 7788999999999999999999999999999875432 122334577899999999 79999999999999999999999
Q ss_pred ccCCCchHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCCCc-
Q 042823 105 LCEGGDLFDRIIAKG--YNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQ- 181 (477)
Q Consensus 105 ~~~gg~L~~~l~~~~--~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~- 181 (477)
|++ ++|.+++.... .+++..+..++.|++.||.|||+++++||||+|+||++ +.++.++|+|||++.......
T Consensus 79 ~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~~~~H~dl~p~nil~---~~~~~~~l~df~~~~~~~~~~~ 154 (283)
T cd07835 79 FLD-LDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSHRVLHRDLKPQNLLI---DREGALKLADFGLARAFGVPVR 154 (283)
T ss_pred ccC-cCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEE---cCCCcEEEeecccccccCCCcc
Confidence 995 58999988765 68999999999999999999999999999999999999 668899999999987653221
Q ss_pred ceecccccccccchhhhhh--hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCc-----------------
Q 042823 182 VYRDIVGSGFYIAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEI----------------- 242 (477)
Q Consensus 182 ~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~----------------- 242 (477)
......+++.|+|||++.+ .++.++||||||+++|+|++|.+||...+.......+.+...
T Consensus 155 ~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (283)
T cd07835 155 TYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWPGVTSLPDYK 234 (283)
T ss_pred ccCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhhhhhchhhh
Confidence 2223456889999998754 468899999999999999999999987665444333322100
Q ss_pred --------cCCCCCCCCCCHHHHHHHHHhcccCccccCCHHHHhcCccc
Q 042823 243 --------DFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWL 283 (477)
Q Consensus 243 --------~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~ 283 (477)
.......+.+++.+.++|.+||+.+|.+|||+.++++||||
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~~~~ 283 (283)
T cd07835 235 PTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQHPYF 283 (283)
T ss_pred hhcccccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhcCCCC
Confidence 00011134678899999999999999999999999999997
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc |
| >KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-43 Score=313.70 Aligned_cols=267 Identities=30% Similarity=0.455 Sum_probs=210.3
Q ss_pred cccccccccccccccCCeEEEEEEEccCC----ceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEe
Q 042823 20 DVMLHYFFGRMLGRGQFGVSYLCTENSTN----RPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYED 95 (477)
Q Consensus 20 ~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~----~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~ 95 (477)
+....|.++..||+|.||.||+|..+.++ +.+|+|.+........ .....-+|+.+++.+ .||||+.+..+|-.
T Consensus 21 e~l~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tG-iS~SAcREiaL~REl-~h~nvi~Lv~Vfl~ 98 (438)
T KOG0666|consen 21 EDLFEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTG-ISMSACREIALLREL-KHPNVISLVKVFLS 98 (438)
T ss_pred HHHHHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCC-cCHHHHHHHHHHHHh-cCCcchhHHHHHhc
Confidence 56678999999999999999999765554 3789998865533222 223456899999999 69999999999976
Q ss_pred -CCeEEEEEeccCCCchHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecC-CCCCEEE
Q 042823 96 -ETAVHVVMELCEGGDLFDRIIAK-----GYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRD-DNALLKV 168 (477)
Q Consensus 96 -~~~~~lv~e~~~gg~L~~~l~~~-----~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~-~~~~~kl 168 (477)
+..+++++||.+. +|+.+++-. ..++...+++|+.||+.|+.|||++=|+||||||.|||+..+. +.|.|||
T Consensus 99 ~d~~v~l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NWvlHRDLKPaNIlvmgdgperG~VKI 177 (438)
T KOG0666|consen 99 HDKKVWLLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNWVLHRDLKPANILVMGDGPERGRVKI 177 (438)
T ss_pred cCceEEEEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhheeeccCCcceEEEeccCCccCeeEe
Confidence 8899999999987 999998642 4578999999999999999999999999999999999995543 3589999
Q ss_pred eecCCccccCCCc----ceecccccccccchhhhhh--hcCCccchHhHHHHHHHHhhCCCCCCCCCh---------hhH
Q 042823 169 TDFGSALLFEEGQ----VYRDIVGSGFYIAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPFWAETK---------KGT 233 (477)
Q Consensus 169 ~Dfg~a~~~~~~~----~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~l~tg~~pf~~~~~---------~~~ 233 (477)
+|||+++.+...- .....+-|.+|+|||.+.| .|+++.||||+|||+.||+|-.|.|.+... ..+
T Consensus 178 aDlGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~~Pfq~dQ 257 (438)
T KOG0666|consen 178 ADLGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTKNPFQHDQ 257 (438)
T ss_pred ecccHHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccchhhhcccCCCchHHH
Confidence 9999999875432 1234567999999999976 599999999999999999999998866432 122
Q ss_pred HHHHHcCCccCCCCCCC---------------------C------------CCHHHHHHHHHhcccCccccCCHHHHhcC
Q 042823 234 YDAILQGEIDFDTDPWP---------------------S------------ISSTAKDLVRRMLTKDPKRRITAAQVLEH 280 (477)
Q Consensus 234 ~~~i~~~~~~~~~~~~~---------------------~------------~~~~~~~li~~~l~~dp~~R~s~~~~l~h 280 (477)
+..|..--.......|| + -++.+.+|+.+||+.||.+|.|++++|+|
T Consensus 258 l~rIf~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~~~a~~LL~klL~yDP~kRIta~qAleh 337 (438)
T KOG0666|consen 258 LDRIFEVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVKDPSALDLLQKLLTYDPIKRITAEQALEH 337 (438)
T ss_pred HHHHHHHcCCCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhcCCCchHHHHHHHHhccCchhhccHHHHhcc
Confidence 33333211111112222 1 24558899999999999999999999999
Q ss_pred cccCcCCCC
Q 042823 281 PWLRESGEA 289 (477)
Q Consensus 281 ~~~~~~~~~ 289 (477)
+||....-.
T Consensus 338 ~yF~~d~lp 346 (438)
T KOG0666|consen 338 PYFTEDPLP 346 (438)
T ss_pred cccccCCCC
Confidence 999987544
|
|
| >cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-41 Score=323.80 Aligned_cols=249 Identities=21% Similarity=0.321 Sum_probs=210.0
Q ss_pred cccccccccccccCCeEEEEEEEcc-----CCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeC
Q 042823 22 MLHYFFGRMLGRGQFGVSYLCTENS-----TNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDE 96 (477)
Q Consensus 22 ~~~Y~~~~~iG~G~~g~V~~~~~~~-----~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~ 96 (477)
.++|.+.+.||+|+||.||+|.+.. ++..||+|++..... ......+.+|++++..+ +||||+++++++...
T Consensus 4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~ 80 (280)
T cd05049 4 RDTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETAS--NDARKDFEREAELLTNF-QHENIVKFYGVCTEG 80 (280)
T ss_pred hHHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCC--HHHHHHHHHHHHHHHhc-CCCCchheeeEEecC
Confidence 3579999999999999999998753 467899998864322 22456788999999999 799999999999999
Q ss_pred CeEEEEEeccCCCchHHHHHHcC--------------CCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCC
Q 042823 97 TAVHVVMELCEGGDLFDRIIAKG--------------YNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDD 162 (477)
Q Consensus 97 ~~~~lv~e~~~gg~L~~~l~~~~--------------~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~ 162 (477)
...|+||||++|++|.+++...+ .+++.++..++.|++.||.|||++|++||||||+||++ +.
T Consensus 81 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~h~dlkp~nili---~~ 157 (280)
T cd05049 81 DPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQHFVHRDLATRNCLV---GY 157 (280)
T ss_pred CCeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeeccccccceEEE---cC
Confidence 99999999999999999997643 36888999999999999999999999999999999999 67
Q ss_pred CCCEEEeecCCccccCCCcc---eecccccccccchhhhhh-hcCCccchHhHHHHHHHHhh-CCCCCCCCChhhHHHHH
Q 042823 163 NALLKVTDFGSALLFEEGQV---YRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAI 237 (477)
Q Consensus 163 ~~~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~t-g~~pf~~~~~~~~~~~i 237 (477)
++.+||+|||++........ .....+++.|+|||++.+ .++.++|||||||++|+|++ |..||...........+
T Consensus 158 ~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~~~~~~~ 237 (280)
T cd05049 158 DLVVKIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNEEVIECI 237 (280)
T ss_pred CCeEEECCcccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHH
Confidence 78999999999875432211 123345778999999864 68999999999999999998 99999888887777777
Q ss_pred HcCCccCCCCCCCCCCHHHHHHHHHhcccCccccCCHHHHhc
Q 042823 238 LQGEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLE 279 (477)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~ 279 (477)
..+...... ..++..+++++.+||..||++|||+.++++
T Consensus 238 ~~~~~~~~~---~~~~~~~~~li~~~l~~~p~~Rp~~~eil~ 276 (280)
T cd05049 238 TQGRLLQRP---RTCPSEVYDIMLGCWKRDPQQRINIKDIHE 276 (280)
T ss_pred HcCCcCCCC---CCCCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence 766543322 467899999999999999999999999975
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt |
| >cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-41 Score=326.43 Aligned_cols=250 Identities=20% Similarity=0.247 Sum_probs=205.0
Q ss_pred ccccccccccccCCeEEEEEEEccCCc--eEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEE
Q 042823 23 LHYFFGRMLGRGQFGVSYLCTENSTNR--PYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVH 100 (477)
Q Consensus 23 ~~Y~~~~~iG~G~~g~V~~~~~~~~~~--~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~ 100 (477)
++|++.+.||+|+||.||+|..+.++. .+++|.+... ........+.+|+.++.++.+||||+++++++.....+|
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~--~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~ 79 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEF--ASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLY 79 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEcccc--CCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcce
Confidence 579999999999999999999877765 4688876532 122344568889999999977999999999999999999
Q ss_pred EEEeccCCCchHHHHHHcC----------------CCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCC
Q 042823 101 VVMELCEGGDLFDRIIAKG----------------YNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNA 164 (477)
Q Consensus 101 lv~e~~~gg~L~~~l~~~~----------------~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~ 164 (477)
+||||+++|+|.+++.... .+++..+..++.|++.||.|||++|++||||||+||++ +.++
T Consensus 80 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nill---~~~~ 156 (297)
T cd05089 80 IAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQFIHRDLAARNVLV---GENL 156 (297)
T ss_pred EEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCcCCcceEEE---CCCC
Confidence 9999999999999997642 47888999999999999999999999999999999999 6778
Q ss_pred CEEEeecCCccccCCCcceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhh-CCCCCCCCChhhHHHHHHcCCc
Q 042823 165 LLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQGEI 242 (477)
Q Consensus 165 ~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~t-g~~pf~~~~~~~~~~~i~~~~~ 242 (477)
.+||+|||++..............+..|+|||++.+ .++.++|||||||++|+|++ |.+||...........+..+..
T Consensus 157 ~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~~~~~~~~~~~~ 236 (297)
T cd05089 157 ASKIADFGLSRGEEVYVKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYR 236 (297)
T ss_pred eEEECCcCCCccccceeccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcCCC
Confidence 899999998864322111111223456999999864 58999999999999999997 9999988877777766655422
Q ss_pred cCCCCCCCCCCHHHHHHHHHhcccCccccCCHHHHhcC
Q 042823 243 DFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEH 280 (477)
Q Consensus 243 ~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h 280 (477)
. .....++..+.+|+.+||..+|.+|||++++++.
T Consensus 237 ~---~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~ 271 (297)
T cd05089 237 M---EKPRNCDDEVYELMRQCWRDRPYERPPFAQISVQ 271 (297)
T ss_pred C---CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 1 1224588999999999999999999999999753
|
Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations. |
| >KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-43 Score=335.40 Aligned_cols=239 Identities=23% Similarity=0.394 Sum_probs=206.2
Q ss_pred cccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEeccC
Q 042823 28 GRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVVMELCE 107 (477)
Q Consensus 28 ~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~lv~e~~~ 107 (477)
.+-||+|+.|-||+|+. .+..||||++..- -+.+|+-+++| +||||+.|.++|.....+|||||||.
T Consensus 129 LeWlGSGaQGAVF~Grl--~netVAVKKV~el----------kETdIKHLRkL-kH~NII~FkGVCtqsPcyCIiMEfCa 195 (904)
T KOG4721|consen 129 LEWLGSGAQGAVFLGRL--HNETVAVKKVREL----------KETDIKHLRKL-KHPNIITFKGVCTQSPCYCIIMEFCA 195 (904)
T ss_pred hhhhccCcccceeeeec--cCceehhHHHhhh----------hhhhHHHHHhc-cCcceeeEeeeecCCceeEEeeeccc
Confidence 46699999999999986 4788999987421 12466778888 79999999999999999999999999
Q ss_pred CCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCCCcceeccc
Q 042823 108 GGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIV 187 (477)
Q Consensus 108 gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~ 187 (477)
.|.|...|+....++......|..+|+.|++|||.+.|||||||.-|||+ ..+..|||+|||.++..........++
T Consensus 196 ~GqL~~VLka~~~itp~llv~Wsk~IA~GM~YLH~hKIIHRDLKSPNiLI---s~~d~VKIsDFGTS~e~~~~STkMSFa 272 (904)
T KOG4721|consen 196 QGQLYEVLKAGRPITPSLLVDWSKGIAGGMNYLHLHKIIHRDLKSPNILI---SYDDVVKISDFGTSKELSDKSTKMSFA 272 (904)
T ss_pred cccHHHHHhccCccCHHHHHHHHHHhhhhhHHHHHhhHhhhccCCCceEe---eccceEEeccccchHhhhhhhhhhhhh
Confidence 99999999999999999999999999999999999999999999999999 455679999999999887776777899
Q ss_pred ccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCCCCHHHHHHHHHhccc
Q 042823 188 GSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTK 266 (477)
Q Consensus 188 gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~ 266 (477)
||..|||||++++ +.+.|+|||||||+|||||||..||..-....++.-+-.+.+..+.+ ..+|+-++-||+.||+-
T Consensus 273 GTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssAIIwGVGsNsL~LpvP--stcP~GfklL~Kqcw~s 350 (904)
T KOG4721|consen 273 GTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAIIWGVGSNSLHLPVP--STCPDGFKLLLKQCWNS 350 (904)
T ss_pred hhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchheeEEeccCCcccccCc--ccCchHHHHHHHHHHhc
Confidence 9999999999985 68999999999999999999999997655544444443344444332 46889999999999999
Q ss_pred CccccCCHHHHhcCcccC
Q 042823 267 DPKRRITAAQVLEHPWLR 284 (477)
Q Consensus 267 dp~~R~s~~~~l~h~~~~ 284 (477)
.|..||++.|+|.|-=+.
T Consensus 351 KpRNRPSFrqil~HldIa 368 (904)
T KOG4721|consen 351 KPRNRPSFRQILLHLDIA 368 (904)
T ss_pred CCCCCccHHHHHHHHhhc
Confidence 999999999999996443
|
|
| >cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-41 Score=337.30 Aligned_cols=255 Identities=21% Similarity=0.306 Sum_probs=206.2
Q ss_pred ccccccccccccccccccCCeEEEEEEEccC-----CceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEE
Q 042823 17 AYEDVMLHYFFGRMLGRGQFGVSYLCTENST-----NRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKS 91 (477)
Q Consensus 17 ~~~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~-----~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~ 91 (477)
+++...++|++++.||+|+||.||+|.+... +..||+|++.... .......+.+|+.++..+..||||+++++
T Consensus 31 ~~~~~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~ 108 (400)
T cd05105 31 RWEFPRDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTA--RSSEKQALMSELKIMTHLGPHLNIVNLLG 108 (400)
T ss_pred ceeccccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCC--ChHHHHHHHHHHHHHHhcCCCCCeeeEEE
Confidence 5666788999999999999999999987432 3469999986432 23345678899999999966999999999
Q ss_pred EEEeCCeEEEEEeccCCCchHHHHHHc-----------------------------------------------------
Q 042823 92 TYEDETAVHVVMELCEGGDLFDRIIAK----------------------------------------------------- 118 (477)
Q Consensus 92 ~~~~~~~~~lv~e~~~gg~L~~~l~~~----------------------------------------------------- 118 (477)
++......|+|||||++|+|.+++.++
T Consensus 109 ~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (400)
T cd05105 109 ACTKSGPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQY 188 (400)
T ss_pred EEccCCceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhccccccccccccccccc
Confidence 999999999999999999999988653
Q ss_pred -------------------------------------------CCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCce
Q 042823 119 -------------------------------------------GYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENF 155 (477)
Q Consensus 119 -------------------------------------------~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Ni 155 (477)
..+++..+..++.||+.||.|||+.+|+||||||+||
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dikp~Ni 268 (400)
T cd05105 189 VPMLEIKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASKNCVHRDLAARNV 268 (400)
T ss_pred chhhhhhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHhE
Confidence 1367778889999999999999999999999999999
Q ss_pred eeeecCCCCCEEEeecCCccccCCCcc---eecccccccccchhhhhh-hcCCccchHhHHHHHHHHhh-CCCCCCCCCh
Q 042823 156 SFISRDDNALLKVTDFGSALLFEEGQV---YRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLS-GVPPFWAETK 230 (477)
Q Consensus 156 l~~~~~~~~~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~t-g~~pf~~~~~ 230 (477)
++ +.++.+||+|||++........ .....+++.|+|||++.+ .++.++|||||||++|+|++ |..||.....
T Consensus 269 ll---~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~ 345 (400)
T cd05105 269 LL---AQGKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIV 345 (400)
T ss_pred EE---eCCCEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccch
Confidence 99 6677899999999876533221 123356778999999864 58999999999999999997 9999977544
Q ss_pred hhHH-HHHHcCCccCCCCCCCCCCHHHHHHHHHhcccCccccCCHHHHhc
Q 042823 231 KGTY-DAILQGEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLE 279 (477)
Q Consensus 231 ~~~~-~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~ 279 (477)
.... ..+..+ .... ....++..+.+++.+||+.+|++|||+.++.+
T Consensus 346 ~~~~~~~~~~~-~~~~--~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~ 392 (400)
T cd05105 346 DSTFYNKIKSG-YRMA--KPDHATQEVYDIMVKCWNSEPEKRPSFLHLSD 392 (400)
T ss_pred hHHHHHHHhcC-CCCC--CCccCCHHHHHHHHHHCccCHhHCcCHHHHHH
Confidence 3333 333333 2221 22467899999999999999999999998865
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF- |
| >cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.5e-42 Score=319.80 Aligned_cols=252 Identities=27% Similarity=0.489 Sum_probs=213.3
Q ss_pred cccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEE
Q 042823 24 HYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVVM 103 (477)
Q Consensus 24 ~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~lv~ 103 (477)
+|.+.+.||+|+||.||+|.++.++..+|+|.+..... .......+.+|+.+++.+ +||||+++++.+......|+|+
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~E~~~l~~~-~h~~i~~~~~~~~~~~~~~lv~ 78 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKM-PVKEKEASKKEVILLAKM-KHPNIVTFFASFQENGRLFIVM 78 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhc-cchhhHHHHHHHHHHHhC-CCCChhhhhheeccCCeEEEEE
Confidence 58899999999999999999999999999999865422 223456778999999999 7999999999999999999999
Q ss_pred eccCCCchHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCC-CCEEEeecCCccccCCC
Q 042823 104 ELCEGGDLFDRIIAKG--YNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDN-ALLKVTDFGSALLFEEG 180 (477)
Q Consensus 104 e~~~gg~L~~~l~~~~--~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~-~~~kl~Dfg~a~~~~~~ 180 (477)
||+++++|.+++.... .+++..+..++.|++.||.|||+.+++|+||||+||++ +++ ..+||+|||.+......
T Consensus 79 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~nil~---~~~~~~~~l~d~~~~~~~~~~ 155 (257)
T cd08225 79 EYCDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDRKILHRDIKSQNIFL---SKNGMVAKLGDFGIARQLNDS 155 (257)
T ss_pred ecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEE---cCCCCeEEecccccchhccCC
Confidence 9999999999987644 47899999999999999999999999999999999988 444 45799999988765443
Q ss_pred cc-eecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCCCCHHHHH
Q 042823 181 QV-YRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKD 258 (477)
Q Consensus 181 ~~-~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 258 (477)
.. .....|++.|+|||++.+ .++.++|+||+|+++|+|++|..||...+.......+..+.... ..+.++..+.+
T Consensus 156 ~~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~ 232 (257)
T cd08225 156 MELAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNLHQLVLKICQGYFAP---ISPNFSRDLRS 232 (257)
T ss_pred cccccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhcccCCC---CCCCCCHHHHH
Confidence 22 233468899999998864 58899999999999999999999998776666665555543321 22467899999
Q ss_pred HHHHhcccCccccCCHHHHhcCccc
Q 042823 259 LVRRMLTKDPKRRITAAQVLEHPWL 283 (477)
Q Consensus 259 li~~~l~~dp~~R~s~~~~l~h~~~ 283 (477)
+|.+||..+|++|||+.++++||||
T Consensus 233 ~i~~~l~~~p~~Rpt~~~ll~~~~~ 257 (257)
T cd08225 233 LISQLFKVSPRDRPSITSILKRPFL 257 (257)
T ss_pred HHHHHhccChhhCcCHHHHhhCCCC
Confidence 9999999999999999999999997
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. |
| >cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-41 Score=321.78 Aligned_cols=253 Identities=20% Similarity=0.282 Sum_probs=208.2
Q ss_pred cccccccccccccCCeEEEEEEEcc-----CCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeC
Q 042823 22 MLHYFFGRMLGRGQFGVSYLCTENS-----TNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDE 96 (477)
Q Consensus 22 ~~~Y~~~~~iG~G~~g~V~~~~~~~-----~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~ 96 (477)
.+.|.+.+.||+|+||.||+|.+.. ++..||+|.+.... .......+.+|+.+++.+ +||||+++++++.+.
T Consensus 5 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~--~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~ 81 (277)
T cd05036 5 RDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESC--SEQDESDFLMEALIMSKF-NHQNIVRLIGVSFER 81 (277)
T ss_pred HHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCC--CHHHHHHHHHHHHHHHhC-CCCCEeeEEEEEccC
Confidence 3579999999999999999999977 77889999875432 223445678899999999 799999999999999
Q ss_pred CeEEEEEeccCCCchHHHHHHcC-------CCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEe
Q 042823 97 TAVHVVMELCEGGDLFDRIIAKG-------YNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVT 169 (477)
Q Consensus 97 ~~~~lv~e~~~gg~L~~~l~~~~-------~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~ 169 (477)
...|+||||++|++|.+++...+ .+++..+..++.||+.||.|||+++++||||||+||++...+....+||+
T Consensus 82 ~~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~nil~~~~~~~~~~kl~ 161 (277)
T cd05036 82 LPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENHFIHRDIAARNCLLTCKGPGRVAKIA 161 (277)
T ss_pred CCcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchheEEEeccCCCcceEec
Confidence 99999999999999999997653 47889999999999999999999999999999999999554445679999
Q ss_pred ecCCccccCCCcce---ecccccccccchhhhh-hhcCCccchHhHHHHHHHHhh-CCCCCCCCChhhHHHHHHcCCccC
Q 042823 170 DFGSALLFEEGQVY---RDIVGSGFYIAPEVLR-RRYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQGEIDF 244 (477)
Q Consensus 170 Dfg~a~~~~~~~~~---~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~l~t-g~~pf~~~~~~~~~~~i~~~~~~~ 244 (477)
|||++......... ....+++.|+|||++. ..++.++|||||||++|+|++ |..||...+.......+......
T Consensus 162 dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~- 240 (277)
T cd05036 162 DFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQEVMEFVTGGGRL- 240 (277)
T ss_pred cCccccccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCcC-
Confidence 99998765332211 1223356799999986 468999999999999999997 99999887776666555443221
Q ss_pred CCCCCCCCCHHHHHHHHHhcccCccccCCHHHHhcC
Q 042823 245 DTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEH 280 (477)
Q Consensus 245 ~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h 280 (477)
...+.++..+.+++.+||+.+|++|||+.++++|
T Consensus 241 --~~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~ 274 (277)
T cd05036 241 --DPPKGCPGPVYRIMTDCWQHTPEDRPNFATILER 274 (277)
T ss_pred --CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 1124678999999999999999999999999986
|
Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well |
| >PHA03210 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-42 Score=353.72 Aligned_cols=265 Identities=22% Similarity=0.299 Sum_probs=197.8
Q ss_pred ccccccccccccccccccCCeEEEEEEEccCC-ceEEEE--------------EeecCCccchhhHHHHHHHHHHHHhcc
Q 042823 17 AYEDVMLHYFFGRMLGRGQFGVSYLCTENSTN-RPYACK--------------SIAKKPKMRLAENDMIRREIQIRLYLS 81 (477)
Q Consensus 17 ~~~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~-~~~aiK--------------~~~~~~~~~~~~~~~~~~e~~~~~~l~ 81 (477)
....+.++|++++.||+|+||+||+|..+... ...+.| .+.+...........+.+|+.++.++
T Consensus 142 ~~~~~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l- 220 (501)
T PHA03210 142 HDDEFLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRL- 220 (501)
T ss_pred cchhhhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhC-
Confidence 34567789999999999999999998765332 222222 11111111223345678999999999
Q ss_pred CCCCeeEEEEEEEeCCeEEEEEeccCCCchHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcee
Q 042823 82 GQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAK-----GYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFS 156 (477)
Q Consensus 82 ~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~-----~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil 156 (477)
+||||+++++++...+..|+|++++. ++|.+++... ......+++.++.||+.||.|||++||+||||||+|||
T Consensus 221 ~HpnIv~l~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~gIiHrDLKP~NIL 299 (501)
T PHA03210 221 NHENILKIEEILRSEANTYMITQKYD-FDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKKLIHRDIKLENIF 299 (501)
T ss_pred CCCCcCcEeEEEEECCeeEEEEeccc-cCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEE
Confidence 79999999999999999999999995 4788877543 22346678899999999999999999999999999999
Q ss_pred eeecCCCCCEEEeecCCccccCCCcc--eecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCCh---
Q 042823 157 FISRDDNALLKVTDFGSALLFEEGQV--YRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETK--- 230 (477)
Q Consensus 157 ~~~~~~~~~~kl~Dfg~a~~~~~~~~--~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~--- 230 (477)
+ +..+.+||+|||++..+..... .....||+.|+|||++.+ .++.++|||||||++|+|++|..|+.....
T Consensus 300 l---~~~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~~~ 376 (501)
T PHA03210 300 L---NCDGKIVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGDGGGKP 376 (501)
T ss_pred E---CCCCCEEEEeCCCceecCcccccccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCccCCCCCH
Confidence 9 7788999999999987644322 234679999999999875 589999999999999999998765443221
Q ss_pred hhHHHHHHcCCc----cCCC------------------CC------CCCCCHHHHHHHHHhcccCccccCCHHHHhcCcc
Q 042823 231 KGTYDAILQGEI----DFDT------------------DP------WPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPW 282 (477)
Q Consensus 231 ~~~~~~i~~~~~----~~~~------------------~~------~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~ 282 (477)
...+..+..... .++. .. ...++.++.++|.+||+.||.+|||+.|+|.|||
T Consensus 377 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~hp~ 456 (501)
T PHA03210 377 GKQLLKIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLALPL 456 (501)
T ss_pred HHHHHHHHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHhhChh
Confidence 122222211100 0000 00 0135677888999999999999999999999999
Q ss_pred cCcC
Q 042823 283 LRES 286 (477)
Q Consensus 283 ~~~~ 286 (477)
|...
T Consensus 457 f~~~ 460 (501)
T PHA03210 457 FSAE 460 (501)
T ss_pred hhcC
Confidence 9764
|
|
| >KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-43 Score=304.77 Aligned_cols=253 Identities=25% Similarity=0.337 Sum_probs=206.9
Q ss_pred ccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEe---
Q 042823 19 EDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYED--- 95 (477)
Q Consensus 19 ~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~--- 95 (477)
..-..||+|.+.||+|||+.||++.+..++..||+|++.-.. ....+...+|+...+++ +|||+++++++...
T Consensus 17 ~In~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~---~~~~e~~~rEid~~rkf-~s~~vl~l~dh~l~~~~ 92 (302)
T KOG2345|consen 17 IINNKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHS---QEDIEEALREIDNHRKF-NSPNVLRLVDHQLREEK 92 (302)
T ss_pred EEcCceEEEeeeecCCCceeeeeecccCcccchhhheeeccc---hHHHHHHHHHHHHHHhh-CCcchHHHHHHHHHhhc
Confidence 344568999999999999999999999999999999986543 35567788999999999 79999999887633
Q ss_pred --CCeEEEEEeccCCCchHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHcC--CeeccCCCCceeeeecCCCCCEE
Q 042823 96 --ETAVHVVMELCEGGDLFDRIIA----KGYNSERDAATVLRAIVNAVNVCHSMG--VMHRDLKPENFSFISRDDNALLK 167 (477)
Q Consensus 96 --~~~~~lv~e~~~gg~L~~~l~~----~~~~~~~~~~~i~~qil~~L~~lH~~~--ivH~dlkp~Nil~~~~~~~~~~k 167 (477)
....||++.|...|||.+.+.. ...++|.++..|+.+|++||.+||+.. ++||||||.||++ .+.+.++
T Consensus 93 D~~~~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~~~yAH~DiKP~NILl---s~~~~~v 169 (302)
T KOG2345|consen 93 DGKHEAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKEPPYAHRDIKPANILL---SDSGLPV 169 (302)
T ss_pred cCceeEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccCCcccccCCCcceeEe---cCCCceE
Confidence 3459999999999999999875 236899999999999999999999998 9999999999999 6678999
Q ss_pred EeecCCccccCCCcc----------eecccccccccchhhhhh----hcCCccchHhHHHHHHHHhhCCCCCCCCC--hh
Q 042823 168 VTDFGSALLFEEGQV----------YRDIVGSGFYIAPEVLRR----RYGKEIDIWSAGVILYILLSGVPPFWAET--KK 231 (477)
Q Consensus 168 l~Dfg~a~~~~~~~~----------~~~~~gt~~y~aPE~~~~----~~~~~~DiwslG~il~~l~tg~~pf~~~~--~~ 231 (477)
|+|||.+....-... ......|..|+|||.+.- ..+.++|||||||++|.|+.|..||...- ..
T Consensus 170 l~D~GS~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~Gg 249 (302)
T KOG2345|consen 170 LMDLGSATQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQQGG 249 (302)
T ss_pred EEeccCccccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhhcCC
Confidence 999998875421100 012246888999999852 47899999999999999999999994321 11
Q ss_pred hHHHHHHcCCccCCCCCCCCCCHHHHHHHHHhcccCccccCCHHHHhcC
Q 042823 232 GTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEH 280 (477)
Q Consensus 232 ~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h 280 (477)
....++.++.+.++.. +.+|+.+.++|+.||+.||.+||++.+++.+
T Consensus 250 SlaLAv~n~q~s~P~~--~~yse~l~~lik~mlqvdP~qRP~i~~ll~~ 296 (302)
T KOG2345|consen 250 SLALAVQNAQISIPNS--SRYSEALHQLIKSMLQVDPNQRPTIPELLSK 296 (302)
T ss_pred eEEEeeeccccccCCC--CCccHHHHHHHHHHhcCCcccCCCHHHHHHH
Confidence 2223445555566554 3489999999999999999999999999864
|
|
| >cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-41 Score=321.99 Aligned_cols=253 Identities=20% Similarity=0.276 Sum_probs=207.0
Q ss_pred ccccccccccccccccCCeEEEEEEEc-----cCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEE
Q 042823 19 EDVMLHYFFGRMLGRGQFGVSYLCTEN-----STNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTY 93 (477)
Q Consensus 19 ~~~~~~Y~~~~~iG~G~~g~V~~~~~~-----~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~ 93 (477)
+...++|++.+.||+|+||.||+|.++ .++..||+|++.... .......+.+|+.++..+ +||||+++++++
T Consensus 2 ~~~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~--~~~~~~~~~~e~~~l~~l-~~~~iv~~~~~~ 78 (277)
T cd05062 2 EVAREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAA--SMRERIEFLNEASVMKEF-NCHHVVRLLGVV 78 (277)
T ss_pred cccHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccC--CHHHHHHHHHHHHHHHhC-CCCCeeeEEEEE
Confidence 345678999999999999999999864 245679999875432 223445678899999998 799999999999
Q ss_pred EeCCeEEEEEeccCCCchHHHHHHcC----------CCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCC
Q 042823 94 EDETAVHVVMELCEGGDLFDRIIAKG----------YNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDN 163 (477)
Q Consensus 94 ~~~~~~~lv~e~~~gg~L~~~l~~~~----------~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~ 163 (477)
......++||||+++|+|.+++.+.. .++...+..++.|++.||.|||+.|++||||||+||++ +.+
T Consensus 79 ~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~vH~dlkp~Nil~---~~~ 155 (277)
T cd05062 79 SQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANKFVHRDLAARNCMV---AED 155 (277)
T ss_pred cCCCCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCcchheEEE---cCC
Confidence 99999999999999999999987532 24667888999999999999999999999999999999 678
Q ss_pred CCEEEeecCCccccCCCcce---ecccccccccchhhhhh-hcCCccchHhHHHHHHHHhh-CCCCCCCCChhhHHHHHH
Q 042823 164 ALLKVTDFGSALLFEEGQVY---RDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAIL 238 (477)
Q Consensus 164 ~~~kl~Dfg~a~~~~~~~~~---~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~t-g~~pf~~~~~~~~~~~i~ 238 (477)
+.+||+|||++......... ....+++.|+|||++.+ .++.++|||||||++|+|++ |..||.+.........+.
T Consensus 156 ~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~~~~~~~~~ 235 (277)
T cd05062 156 FTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNEQVLRFVM 235 (277)
T ss_pred CCEEECCCCCccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHH
Confidence 88999999998754332211 12345778999999864 58999999999999999999 789998877777666665
Q ss_pred cCCccCCCCCCCCCCHHHHHHHHHhcccCccccCCHHHHhcC
Q 042823 239 QGEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEH 280 (477)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h 280 (477)
....... ...+++.+.+++.+||+.+|++|||+.+++++
T Consensus 236 ~~~~~~~---~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~ 274 (277)
T cd05062 236 EGGLLDK---PDNCPDMLFELMRMCWQYNPKMRPSFLEIISS 274 (277)
T ss_pred cCCcCCC---CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 5443221 13578899999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh |
| >cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-41 Score=325.33 Aligned_cols=267 Identities=26% Similarity=0.346 Sum_probs=214.4
Q ss_pred ccccccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEE
Q 042823 15 GKAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYE 94 (477)
Q Consensus 15 ~~~~~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~ 94 (477)
+..+..-.+.|.+.+.||+|+||.||+|.+..+++.||+|.+.+... ......+..|+.++..+.+||||+++++++.
T Consensus 7 ~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~--~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~ 84 (296)
T cd06618 7 GQKYPADLNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGN--KEENKRILMDLDVVLKSHDCPYIVKCYGYFI 84 (296)
T ss_pred ceeccCCcchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCC--hHHHHHHHHHHHHHHhccCCCchHhhheeee
Confidence 34455566789999999999999999999998999999999875432 1234455667777777767999999999999
Q ss_pred eCCeEEEEEeccCCCchHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHH-cCCeeccCCCCceeeeecCCCCCEEEeecC
Q 042823 95 DETAVHVVMELCEGGDLFDRIIA-KGYNSERDAATVLRAIVNAVNVCHS-MGVMHRDLKPENFSFISRDDNALLKVTDFG 172 (477)
Q Consensus 95 ~~~~~~lv~e~~~gg~L~~~l~~-~~~~~~~~~~~i~~qil~~L~~lH~-~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg 172 (477)
+....|+||||+.+ +|.+.+.. .+.+++..+..++.|++.||.|||+ .||+||||+|+||++ +.++.+||+|||
T Consensus 85 ~~~~~~~v~e~~~~-~l~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~i~H~dl~p~nill---~~~~~~kL~dfg 160 (296)
T cd06618 85 TDSDVFICMELMST-CLDKLLKRIQGPIPEDILGKMTVAIVKALHYLKEKHGVIHRDVKPSNILL---DASGNVKLCDFG 160 (296)
T ss_pred cCCeEEEEeeccCc-CHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCCEecCCCcHHHEEE---cCCCCEEECccc
Confidence 99999999999854 77666655 4578999999999999999999997 599999999999999 678899999999
Q ss_pred CccccCCCcceecccccccccchhhhhh-----hcCCccchHhHHHHHHHHhhCCCCCCCCCh-hhHHHHHHcCCccCCC
Q 042823 173 SALLFEEGQVYRDIVGSGFYIAPEVLRR-----RYGKEIDIWSAGVILYILLSGVPPFWAETK-KGTYDAILQGEIDFDT 246 (477)
Q Consensus 173 ~a~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~DiwslG~il~~l~tg~~pf~~~~~-~~~~~~i~~~~~~~~~ 246 (477)
++.............+++.|+|||.+.+ .++.++||||||+++|+|++|+.||..... .+.+..+........
T Consensus 161 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~- 239 (296)
T cd06618 161 ISGRLVDSKAKTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTEFEVLTKILQEEPPSL- 239 (296)
T ss_pred cchhccCCCcccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhHHHHHHHHhcCCCCCC-
Confidence 9876644433344567889999999863 378899999999999999999999965332 233444444332211
Q ss_pred CCCCCCCHHHHHHHHHhcccCccccCCHHHHhcCcccCcCCC
Q 042823 247 DPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGE 288 (477)
Q Consensus 247 ~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~~~ 288 (477)
+....+++++.+|+.+||+.||++||++.++++||||.....
T Consensus 240 ~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~~ 281 (296)
T cd06618 240 PPNEGFSPDFCSFVDLCLTKDHRKRPKYRELLQHPFIRRYET 281 (296)
T ss_pred CCCCCCCHHHHHHHHHHccCChhhCCCHHHHhcChhhhccch
Confidence 111247899999999999999999999999999999986543
|
Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it |
| >cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-41 Score=322.22 Aligned_cols=259 Identities=30% Similarity=0.487 Sum_probs=218.9
Q ss_pred ccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCe
Q 042823 19 EDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETA 98 (477)
Q Consensus 19 ~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~ 98 (477)
.+..+.|.+.+.||+|++|.||+|.+..+++.||+|++..... ....+.+|+.++..+ +||||+++++++.....
T Consensus 15 ~~~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~----~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~ 89 (286)
T cd06614 15 GDPRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ----NKELIINEILIMKDC-KHPNIVDYYDSYLVGDE 89 (286)
T ss_pred CCccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch----hHHHHHHHHHHHHHC-CCCCeeEEEEEEEECCE
Confidence 3567789999999999999999999998899999999865432 345678899999999 79999999999999999
Q ss_pred EEEEEeccCCCchHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCcccc
Q 042823 99 VHVVMELCEGGDLFDRIIAKG-YNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLF 177 (477)
Q Consensus 99 ~~lv~e~~~gg~L~~~l~~~~-~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~ 177 (477)
.|+|+||++|++|.+++.... .++...+..++.|++.||.|||+.|++|+||+|+||++ +.++.++|+|||.+...
T Consensus 90 ~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~lH~~gi~H~dl~p~ni~i---~~~~~~~l~d~~~~~~~ 166 (286)
T cd06614 90 LWVVMEYMDGGSLTDIITQNFVRMNEPQIAYVCREVLQGLEYLHSQNVIHRDIKSDNILL---SKDGSVKLADFGFAAQL 166 (286)
T ss_pred EEEEEeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCChhhEEE---cCCCCEEECccchhhhh
Confidence 999999999999999998876 89999999999999999999999999999999999999 67788999999987654
Q ss_pred CCCc-ceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCCCCHH
Q 042823 178 EEGQ-VYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISST 255 (477)
Q Consensus 178 ~~~~-~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 255 (477)
.... ......+++.|+|||++.+ .++.++|+|||||++|+|++|..||...........+....... ....+.++..
T Consensus 167 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 245 (286)
T cd06614 167 TKEKSKRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLRALFLITTKGIPP-LKNPEKWSPE 245 (286)
T ss_pred ccchhhhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCC-CcchhhCCHH
Confidence 3321 1233457889999999864 57899999999999999999999998766555444444332221 1122347899
Q ss_pred HHHHHHHhcccCccccCCHHHHhcCcccCcC
Q 042823 256 AKDLVRRMLTKDPKRRITAAQVLEHPWLRES 286 (477)
Q Consensus 256 ~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~ 286 (477)
++++|.+||+.+|.+|||+.++++||||+..
T Consensus 246 l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~ 276 (286)
T cd06614 246 FKDFLNKCLVKDPEKRPSAEELLQHPFLKKA 276 (286)
T ss_pred HHHHHHHHhccChhhCcCHHHHhhChHhhcc
Confidence 9999999999999999999999999999874
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou |
| >KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-42 Score=335.43 Aligned_cols=265 Identities=22% Similarity=0.326 Sum_probs=225.6
Q ss_pred CCCCccccccccccccccccccccccCCeEEEEEEEccCCc---e-EEEEEeecCCccchhhHHHHHHHHHHHHhccCCC
Q 042823 9 QRDPILGKAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNR---P-YACKSIAKKPKMRLAENDMIRREIQIRLYLSGQP 84 (477)
Q Consensus 9 ~~~~~~~~~~~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~---~-~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hp 84 (477)
-..|+..+.|+--+++-.+.++||+|+||.||+|..+..+. . ||+|..............++.+|.++++.+ +||
T Consensus 143 L~~PI~r~~Wel~H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l-~H~ 221 (474)
T KOG0194|consen 143 LKRPIPRQKWELSHSDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQL-NHP 221 (474)
T ss_pred ecccccccccEEeccCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhC-CCC
Confidence 45788889999999999999999999999999998875432 3 899987653434456678899999999998 899
Q ss_pred CeeEEEEEEEeCCeEEEEEeccCCCchHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCC
Q 042823 85 NVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKG-YNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDN 163 (477)
Q Consensus 85 niv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~-~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~ 163 (477)
|||++||+......+|+|||+|+||+|.++|.+.+ .++..+...++.+.+.||+|||+++++||||-..|+|+ ..+
T Consensus 222 NVVr~yGVa~~~~Pl~ivmEl~~gGsL~~~L~k~~~~v~~~ek~~~~~~AA~Gl~YLh~k~~IHRDIAARNcL~---~~~ 298 (474)
T KOG0194|consen 222 NVVRFYGVAVLEEPLMLVMELCNGGSLDDYLKKNKKSLPTLEKLRFCYDAARGLEYLHSKNCIHRDIAARNCLY---SKK 298 (474)
T ss_pred CEEEEEEEEcCCCccEEEEEecCCCcHHHHHHhCCCCCCHHHHHHHHHHHHhHHHHHHHCCCcchhHhHHHhee---cCC
Confidence 99999999999999999999999999999999987 49999999999999999999999999999999999999 666
Q ss_pred CCEEEeecCCccccCCCccee-cccccccccchhhhh-hhcCCccchHhHHHHHHHHhh-CCCCCCCCChhhHHHHHHcC
Q 042823 164 ALLKVTDFGSALLFEEGQVYR-DIVGSGFYIAPEVLR-RRYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQG 240 (477)
Q Consensus 164 ~~~kl~Dfg~a~~~~~~~~~~-~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~l~t-g~~pf~~~~~~~~~~~i~~~ 240 (477)
..+||+|||++.....-.... ..--...|+|||.+. +-|++++||||+||++||+++ |..||.+....+....+...
T Consensus 299 ~~vKISDFGLs~~~~~~~~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~~v~~kI~~~ 378 (474)
T KOG0194|consen 299 GVVKISDFGLSRAGSQYVMKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNYEVKAKIVKN 378 (474)
T ss_pred CeEEeCccccccCCcceeeccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHHHHHHHHHhc
Confidence 778999999987643111111 111345799999996 569999999999999999999 89999999999999998666
Q ss_pred CccCCCCCCCCCCHHHHHHHHHhcccCccccCCHHHHhc
Q 042823 241 EIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLE 279 (477)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~ 279 (477)
.+..+.+ +..|.++..++.+||..+|+.|||+.++.+
T Consensus 379 ~~r~~~~--~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~ 415 (474)
T KOG0194|consen 379 GYRMPIP--SKTPKELAKVMKQCWKKDPEDRPTMSTIKK 415 (474)
T ss_pred CccCCCC--CCCHHHHHHHHHHhccCChhhccCHHHHHH
Confidence 5554443 366889999999999999999999999864
|
|
| >KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.4e-43 Score=335.50 Aligned_cols=255 Identities=20% Similarity=0.335 Sum_probs=215.2
Q ss_pred cccccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEe
Q 042823 16 KAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYED 95 (477)
Q Consensus 16 ~~~~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~ 95 (477)
..++...+...++..||+|+||+||+|.|.. .||||++..... ..+..+.+++|+.++++- +|.||+-+.+++..
T Consensus 385 ~~WeIp~~ev~l~~rIGsGsFGtV~Rg~whG---dVAVK~Lnv~~p-t~~qlqaFKnEVa~lkkT-RH~NIlLFMG~~~~ 459 (678)
T KOG0193|consen 385 EEWEIPPEEVLLGERIGSGSFGTVYRGRWHG---DVAVKLLNVDDP-TPEQLQAFKNEVAVLKKT-RHENILLFMGACMN 459 (678)
T ss_pred cccccCHHHhhccceeccccccceeeccccc---ceEEEEEecCCC-CHHHHHHHHHHHHHHhhc-chhhheeeehhhcC
Confidence 4566666777889999999999999999853 599999876543 345788899999999999 69999999999998
Q ss_pred CCeEEEEEeccCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCc
Q 042823 96 ETAVHVVMELCEGGDLFDRIIAK-GYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSA 174 (477)
Q Consensus 96 ~~~~~lv~e~~~gg~L~~~l~~~-~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a 174 (477)
+.. .||+.+|+|.+|+.+++.. ..+.-...+.|++||+.|+.|||.++|||||||..||++ .+++.|||+|||++
T Consensus 460 p~~-AIiTqwCeGsSLY~hlHv~etkfdm~~~idIAqQiaqGM~YLHAK~IIHrDLKSnNIFl---~~~~kVkIgDFGLa 535 (678)
T KOG0193|consen 460 PPL-AIITQWCEGSSLYTHLHVQETKFDMNTTIDIAQQIAQGMDYLHAKNIIHRDLKSNNIFL---HEDLKVKIGDFGLA 535 (678)
T ss_pred Cce-eeeehhccCchhhhhccchhhhhhHHHHHHHHHHHHHhhhhhhhhhhhhhhccccceEE---ccCCcEEEecccce
Confidence 887 9999999999999999754 468888899999999999999999999999999999999 67799999999998
Q ss_pred cccC---CCcceecccccccccchhhhh----hhcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCC-
Q 042823 175 LLFE---EGQVYRDIVGSGFYIAPEVLR----RRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDT- 246 (477)
Q Consensus 175 ~~~~---~~~~~~~~~gt~~y~aPE~~~----~~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~- 246 (477)
..-. .........|...|||||+++ .+|++.+|||||||++|||+||..||...+..+++..+-+|....+.
T Consensus 536 tvk~~w~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~dqIifmVGrG~l~pd~s 615 (678)
T KOG0193|consen 536 TVKTRWSGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNRDQIIFMVGRGYLMPDLS 615 (678)
T ss_pred eeeeeeccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCChhheEEEecccccCccch
Confidence 6532 233344456788899999986 36999999999999999999999999977777777666666433222
Q ss_pred CCCCCCCHHHHHHHHHhcccCccccCCHHHHhc
Q 042823 247 DPWPSISSTAKDLVRRMLTKDPKRRITAAQVLE 279 (477)
Q Consensus 247 ~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~ 279 (477)
.....++.++++|+..||.++|++||.+.++|.
T Consensus 616 ~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~ 648 (678)
T KOG0193|consen 616 KIRSNCPKAMKRLLSDCWKFDREERPLFPQLLS 648 (678)
T ss_pred hhhccCHHHHHHHHHHHHhcCcccCccHHHHHH
Confidence 223457789999999999999999999999986
|
|
| >cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-41 Score=319.23 Aligned_cols=249 Identities=26% Similarity=0.446 Sum_probs=201.5
Q ss_pred cccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEeccC
Q 042823 28 GRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVVMELCE 107 (477)
Q Consensus 28 ~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~lv~e~~~ 107 (477)
...||+|+||.||+|.+..++..||+|.+.... ......+.+|+.++..+ +||||+++++++..+...++|+||++
T Consensus 13 ~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~---~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~ 88 (268)
T cd06624 13 RVVLGKGTYGIVYAARDLSTQVRIAIKEIPERD---SRYVQPLHEEIALHSYL-KHRNIVQYLGSDSENGFFKIFMEQVP 88 (268)
T ss_pred eEEEecCCceEEEEeEecCCCcEEEEEEecCCC---HHHHHHHHHHHHHHHhc-CCCCeeeeeeeeccCCEEEEEEecCC
Confidence 357999999999999999999999999886442 23456788999999998 79999999999999999999999999
Q ss_pred CCchHHHHHHc-CCC--CHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCCCc-ce
Q 042823 108 GGDLFDRIIAK-GYN--SERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQ-VY 183 (477)
Q Consensus 108 gg~L~~~l~~~-~~~--~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~-~~ 183 (477)
|++|.+++... ..+ ++..+..++.||+.||.|||++||+||||||+||++. ...+.++|+|||.+....... ..
T Consensus 89 ~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~h~dl~p~nil~~--~~~~~~~l~dfg~~~~~~~~~~~~ 166 (268)
T cd06624 89 GGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDNQIVHRDIKGDNVLVN--TYSGVVKISDFGTSKRLAGINPCT 166 (268)
T ss_pred CCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEc--CCCCeEEEecchhheecccCCCcc
Confidence 99999998764 445 7888999999999999999999999999999999982 225689999999887653322 22
Q ss_pred ecccccccccchhhhhh---hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCCCCHHHHHHH
Q 042823 184 RDIVGSGFYIAPEVLRR---RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLV 260 (477)
Q Consensus 184 ~~~~gt~~y~aPE~~~~---~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li 260 (477)
....|++.|+|||++.+ .++.++||||+|+++|+|++|.+||............ .............+++++++++
T Consensus 167 ~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~li 245 (268)
T cd06624 167 ETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAAMFK-VGMFKIHPEIPESLSAEAKNFI 245 (268)
T ss_pred ccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhhhHhh-hhhhccCCCCCcccCHHHHHHH
Confidence 33468899999999853 3788999999999999999999999754332211111 1111111112235788999999
Q ss_pred HHhcccCccccCCHHHHhcCccc
Q 042823 261 RRMLTKDPKRRITAAQVLEHPWL 283 (477)
Q Consensus 261 ~~~l~~dp~~R~s~~~~l~h~~~ 283 (477)
.+||+.+|++|||+.+++.||||
T Consensus 246 ~~~l~~~p~~Rpt~~~ll~~~~~ 268 (268)
T cd06624 246 LRCFEPDPDKRASAHDLLQDPFL 268 (268)
T ss_pred HHHcCCCchhCCCHHHHHhCCCC
Confidence 99999999999999999999997
|
Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina |
| >cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-41 Score=318.24 Aligned_cols=251 Identities=27% Similarity=0.448 Sum_probs=209.2
Q ss_pred ccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 042823 23 LHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVV 102 (477)
Q Consensus 23 ~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~lv 102 (477)
++|++.+.||+|+||.||+|.+..+|+.||+|.+.............+.+|+.+++++ +||||+++++++...+..++|
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~-~~~~i~~~~~~~~~~~~~~lv 80 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQL-DHPNVIKYLASFIENNELNIV 80 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhC-CCCCeeeeeeeeecCCeEEEE
Confidence 5799999999999999999999999999999998754443444467788999999999 799999999999999999999
Q ss_pred EeccCCCchHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccC
Q 042823 103 MELCEGGDLFDRIIA----KGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFE 178 (477)
Q Consensus 103 ~e~~~gg~L~~~l~~----~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~ 178 (477)
|||++||+|.+++.. ...+++..+..++.|++.||.|||+.|++||||+|+||++ +.++.++|+|||++....
T Consensus 81 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~nil~---~~~~~~~l~d~~~~~~~~ 157 (267)
T cd08224 81 LELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKRIMHRDIKPANVFI---TATGVVKLGDLGLGRFFS 157 (267)
T ss_pred EecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecCCcChhhEEE---CCCCcEEEeccceeeecc
Confidence 999999999998864 3457999999999999999999999999999999999999 677889999999887654
Q ss_pred CCc-ceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCCh--hhHHHHHHcCCccCCCCCCCCCCH
Q 042823 179 EGQ-VYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETK--KGTYDAILQGEIDFDTDPWPSISS 254 (477)
Q Consensus 179 ~~~-~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~--~~~~~~i~~~~~~~~~~~~~~~~~ 254 (477)
... ......+++.|+|||.+.+ .++.++||||+||++|+|++|..||..... ......+..+.. ++.+.+.++.
T Consensus 158 ~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 235 (267)
T cd08224 158 SKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEKCDY--PPLPADHYSE 235 (267)
T ss_pred CCCcccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCccHHHHHhhhhcCCC--CCCChhhcCH
Confidence 322 2234568899999999864 588899999999999999999999965432 223333333322 2222336788
Q ss_pred HHHHHHHHhcccCccccCCHHHHhc
Q 042823 255 TAKDLVRRMLTKDPKRRITAAQVLE 279 (477)
Q Consensus 255 ~~~~li~~~l~~dp~~R~s~~~~l~ 279 (477)
.+.++|.+||..+|++|||+.++++
T Consensus 236 ~~~~~i~~cl~~~p~~Rp~~~~il~ 260 (267)
T cd08224 236 ELRDLVSRCINPDPEKRPDISYVLQ 260 (267)
T ss_pred HHHHHHHHHcCCCcccCCCHHHHHH
Confidence 9999999999999999999999875
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a |
| >cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-41 Score=333.03 Aligned_cols=264 Identities=26% Similarity=0.394 Sum_probs=214.9
Q ss_pred ccccccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEE
Q 042823 15 GKAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYE 94 (477)
Q Consensus 15 ~~~~~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~ 94 (477)
+.....+.++|++.+.||+|+||.||+|.+..++..||+|++.+... .......+.+|+.+++.+ +||||+++++++.
T Consensus 7 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~ 84 (343)
T cd07880 7 NKTIWEVPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQ-SELFAKRAYRELRLLKHM-KHENVIGLLDVFT 84 (343)
T ss_pred hhhhhccccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEeccccc-chHHHHHHHHHHHHHHhc-CCCCccceeeeec
Confidence 34556788999999999999999999999999999999999864322 223345677899999999 7999999999997
Q ss_pred eCC------eEEEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEE
Q 042823 95 DET------AVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKV 168 (477)
Q Consensus 95 ~~~------~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl 168 (477)
... .+++||||+ |++|.+++. ...+++..+..++.|++.||.|||+.||+||||||+||++ +..+.+||
T Consensus 85 ~~~~~~~~~~~~lv~e~~-~~~l~~~~~-~~~l~~~~~~~i~~qi~~al~~LH~~gi~H~dlkp~Nill---~~~~~~kl 159 (343)
T cd07880 85 PDLSLDRFHDFYLVMPFM-GTDLGKLMK-HEKLSEDRIQFLVYQMLKGLKYIHAAGIIHRDLKPGNLAV---NEDCELKI 159 (343)
T ss_pred CCccccccceEEEEEecC-CCCHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE---cCCCCEEE
Confidence 654 468999999 678877765 4578999999999999999999999999999999999999 67788999
Q ss_pred eecCCccccCCCcceecccccccccchhhhhh--hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCcc---
Q 042823 169 TDFGSALLFEEGQVYRDIVGSGFYIAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEID--- 243 (477)
Q Consensus 169 ~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~--- 243 (477)
+|||++...... .....+++.|+|||.+.+ .++.++|+||+||++|+|++|.+||...........+......
T Consensus 160 ~dfg~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 237 (343)
T cd07880 160 LDFGLARQTDSE--MTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPSK 237 (343)
T ss_pred eecccccccccC--ccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCH
Confidence 999998765432 234467899999999864 4788999999999999999999999876654444333221110
Q ss_pred --------------------CC----CCCCCCCCHHHHHHHHHhcccCccccCCHHHHhcCcccCcCC
Q 042823 244 --------------------FD----TDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESG 287 (477)
Q Consensus 244 --------------------~~----~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~~ 287 (477)
+. ...++.+++.+.++|.+||+.||++|||+.+++.||||+...
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~~~~~~~~~ 305 (343)
T cd07880 238 EFVQKLQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALAHPYFEEFH 305 (343)
T ss_pred HHHHhhcchhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhcCccHhhhc
Confidence 00 011246788999999999999999999999999999998653
|
Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12 |
| >cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-41 Score=323.06 Aligned_cols=254 Identities=27% Similarity=0.414 Sum_probs=208.1
Q ss_pred ccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhcc--CCCCeeEEEEEEEeCCe----
Q 042823 25 YFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLS--GQPNVVEFKSTYEDETA---- 98 (477)
Q Consensus 25 Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~--~hpniv~~~~~~~~~~~---- 98 (477)
|++.+.||+|+||.||+|.++.+++.||+|++....... .....+.+|+.++.++. +||||+++++++.....
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~ 79 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEE-GIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDREL 79 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccc-hhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCc
Confidence 778999999999999999999889999999986543321 22344567777776664 59999999999988776
Q ss_pred -EEEEEeccCCCchHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCcc
Q 042823 99 -VHVVMELCEGGDLFDRIIAKG--YNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSAL 175 (477)
Q Consensus 99 -~~lv~e~~~gg~L~~~l~~~~--~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~ 175 (477)
++++|||+.+ +|.+++.... .+++..+..++.|++.||.|||+.+++|+||+|+||++ +.++.+||+|||.+.
T Consensus 80 ~~~l~~e~~~~-~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~h~~l~~~nili---~~~~~~~l~dfg~~~ 155 (287)
T cd07838 80 KLTLVFEHVDQ-DLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSHRIVHRDLKPQNILV---TSDGQVKIADFGLAR 155 (287)
T ss_pred eeEEEehhccc-CHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhEEE---ccCCCEEEeccCcce
Confidence 9999999975 8988887643 48999999999999999999999999999999999999 667899999999988
Q ss_pred ccCCCcceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCcc-----CC----
Q 042823 176 LFEEGQVYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEID-----FD---- 245 (477)
Q Consensus 176 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~-----~~---- 245 (477)
............+++.|+|||++.+ .++.++|+||+||++|+|++|.+||...+..+....+...... ++
T Consensus 156 ~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (287)
T cd07838 156 IYSFEMALTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEADQLDKIFDVIGLPSEEEWPRNVS 235 (287)
T ss_pred eccCCcccccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChHHHHHHHHHHcCCCChHhcCCCcc
Confidence 7655444445568889999999864 5788999999999999999999999887766666555432110 00
Q ss_pred --------------CCCCCCCCHHHHHHHHHhcccCccccCCHHHHhcCccc
Q 042823 246 --------------TDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWL 283 (477)
Q Consensus 246 --------------~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~ 283 (477)
....+.+++.+.++|.+||+.||.+||++.++++||||
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~~~~~ 287 (287)
T cd07838 236 LPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQHPYF 287 (287)
T ss_pred cchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhcCcCC
Confidence 00112456888999999999999999999999999997
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both |
| >cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-42 Score=333.85 Aligned_cols=260 Identities=28% Similarity=0.414 Sum_probs=208.6
Q ss_pred cccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeC---
Q 042823 20 DVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDE--- 96 (477)
Q Consensus 20 ~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~--- 96 (477)
++..+|.+.+.||.|+||.||+|.++.+++.||+|.+..... .....+.+|+.+++.+ +||||+++++++...
T Consensus 2 ~~~~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~---~~~~~~~~Ei~~l~~l-~h~~i~~~~~~~~~~~~~ 77 (342)
T cd07854 2 DLGSRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDP---QSVKHALREIKIIRRL-DHDNIVKVYEVLGPSGSD 77 (342)
T ss_pred CcCcceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCC---chHHHHHHHHHHHHhc-CCCcchhhHhhhcccccc
Confidence 356899999999999999999999999999999999865432 3346678899999999 799999999876544
Q ss_pred -----------CeEEEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCC
Q 042823 97 -----------TAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNAL 165 (477)
Q Consensus 97 -----------~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~ 165 (477)
..+|+||||+++ +|.+++.. +.+++..+..++.||+.||.|||+.|++||||||+||++. ..+..
T Consensus 78 ~~~~~~~~~~~~~~~lv~e~~~~-~L~~~~~~-~~l~~~~~~~~~~qi~~aL~~LH~~givH~dikp~Nili~--~~~~~ 153 (342)
T cd07854 78 LTEDVGSLTELNSVYIVQEYMET-DLANVLEQ-GPLSEEHARLFMYQLLRGLKYIHSANVLHRDLKPANVFIN--TEDLV 153 (342)
T ss_pred cccccccccccceEEEEeecccc-cHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEc--CCCce
Confidence 358999999974 88887754 4689999999999999999999999999999999999883 24567
Q ss_pred EEEeecCCccccCCCcc----eecccccccccchhhhhh--hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHc
Q 042823 166 LKVTDFGSALLFEEGQV----YRDIVGSGFYIAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQ 239 (477)
Q Consensus 166 ~kl~Dfg~a~~~~~~~~----~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~ 239 (477)
+||+|||.+........ .....|+..|+|||++.+ .++.++|||||||++|+|++|..||...........+..
T Consensus 154 ~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~~~~~ 233 (342)
T cd07854 154 LKIGDFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLILE 233 (342)
T ss_pred EEECCcccceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Confidence 99999999876532211 122367889999998753 478899999999999999999999987765544444332
Q ss_pred CCcc----------------------CCC----CCCCCCCHHHHHHHHHhcccCccccCCHHHHhcCcccCcCC
Q 042823 240 GEID----------------------FDT----DPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESG 287 (477)
Q Consensus 240 ~~~~----------------------~~~----~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~~ 287 (477)
.... ... ...+.++.++.+||.+||+.||.+|||+.++++||||+...
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h~~~~~~~ 307 (342)
T cd07854 234 SVPVVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALMHPYMSCYS 307 (342)
T ss_pred hcCCCChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhCCCcccccc
Confidence 2100 000 01235788999999999999999999999999999997543
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi |
| >cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-41 Score=315.96 Aligned_cols=252 Identities=30% Similarity=0.507 Sum_probs=217.3
Q ss_pred cccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEE
Q 042823 24 HYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVVM 103 (477)
Q Consensus 24 ~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~lv~ 103 (477)
+|.+.+.||.|+||.||+|.+..+++.||+|++..... .......+.+|+++++.+ +|||++++.+.+......++|+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~l~~l-~~~~~~~~~~~~~~~~~~~lv~ 78 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNM-SEKEREDALNEVKILKKL-NHPNIIKYYESFEEKGKLCIVM 78 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccC-ChHHHHHHHHHHHHHHhc-CCCChhheEEEEecCCEEEEEE
Confidence 58899999999999999999998999999999865432 234566788999999999 6999999999999999999999
Q ss_pred eccCCCchHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCC
Q 042823 104 ELCEGGDLFDRIIAK----GYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEE 179 (477)
Q Consensus 104 e~~~gg~L~~~l~~~----~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~ 179 (477)
||++|++|.+++... ..+++..+..++.+++.||.|||++|++|+||+|+||++ +..+.++|+|||.+.....
T Consensus 79 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~H~dl~~~nil~---~~~~~~~l~d~~~~~~~~~ 155 (258)
T cd08215 79 EYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRKILHRDIKPQNIFL---TSNGLVKLGDFGISKVLSS 155 (258)
T ss_pred EecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecccCChHHeEE---cCCCcEEECCccceeeccc
Confidence 999999999999774 678999999999999999999999999999999999999 6678899999999876644
Q ss_pred Cc-ceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCCCCHHHH
Q 042823 180 GQ-VYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAK 257 (477)
Q Consensus 180 ~~-~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 257 (477)
.. ......|++.|+|||.+.+ .++.++|+||+|+++++|++|..||.................... ...++..+.
T Consensus 156 ~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 232 (258)
T cd08215 156 TVDLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENLLELALKILKGQYPPI---PSQYSSELR 232 (258)
T ss_pred CcceecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcHHHHHHHHhcCCCCCC---CCCCCHHHH
Confidence 33 2334578999999998764 578899999999999999999999987776666666555432221 136789999
Q ss_pred HHHHHhcccCccccCCHHHHhcCccc
Q 042823 258 DLVRRMLTKDPKRRITAAQVLEHPWL 283 (477)
Q Consensus 258 ~li~~~l~~dp~~R~s~~~~l~h~~~ 283 (477)
+++.+||..+|++|||+.++|+||||
T Consensus 233 ~~i~~~l~~~p~~Rp~~~~ll~~~~~ 258 (258)
T cd08215 233 NLVSSLLQKDPEERPSIAQILQSPFI 258 (258)
T ss_pred HHHHHHcCCChhhCcCHHHHhcCCCC
Confidence 99999999999999999999999997
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They |
| >KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-44 Score=309.75 Aligned_cols=267 Identities=27% Similarity=0.426 Sum_probs=220.7
Q ss_pred ccccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEE--
Q 042823 17 AYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYE-- 94 (477)
Q Consensus 17 ~~~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~-- 94 (477)
++......|.-..+||+|.||.||+|+++.+|++||+|++........ ....-.+|++++..| .|+|++.+++.+.
T Consensus 11 P~~~~~~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeG-fpitalreikiL~~l-kHenv~nliEic~tk 88 (376)
T KOG0669|consen 11 PFCDEVSKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEG-FPITALREIKILQLL-KHENVVNLIEICRTK 88 (376)
T ss_pred CceecchHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccC-CcHHHHHHHHHHHHh-cchhHHHHHHHHhhc
Confidence 455566788889999999999999999999999999998754322111 123345899999988 6999999988773
Q ss_pred ------eCCeEEEEEeccCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEE
Q 042823 95 ------DETAVHVVMELCEGGDLFDRIIAK-GYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLK 167 (477)
Q Consensus 95 ------~~~~~~lv~e~~~gg~L~~~l~~~-~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~k 167 (477)
+...+|+|+++|+. +|.-+|... .+++..++..++.+++.||.|+|+..|+|||+||+|+|+ +.++.+|
T Consensus 89 ~Tp~~r~r~t~ylVf~~ceh-DLaGlLsn~~vr~sls~Ikk~Mk~Lm~GL~~iHr~kilHRDmKaaNvLI---t~dgilk 164 (376)
T KOG0669|consen 89 ATPTNRDRATFYLVFDFCEH-DLAGLLSNRKVRFSLSEIKKVMKGLMNGLYYIHRNKILHRDMKAANVLI---TKDGILK 164 (376)
T ss_pred cCCcccccceeeeeHHHhhh-hHHHHhcCccccccHHHHHHHHHHHHHHHHHHHHhhHHhhcccHhhEEE---cCCceEE
Confidence 33459999999987 888888765 679999999999999999999999999999999999999 7889999
Q ss_pred EeecCCccccCCC-----cceecccccccccchhhhhh--hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcC
Q 042823 168 VTDFGSALLFEEG-----QVYRDIVGSGFYIAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQG 240 (477)
Q Consensus 168 l~Dfg~a~~~~~~-----~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~ 240 (477)
|+|||+++.++.. +.+...+-|.+|++||.+.| .|+++.|||+.|||+.+|+|+.+.+.+.+....+..|..-
T Consensus 165 lADFGlar~fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~L 244 (376)
T KOG0669|consen 165 LADFGLARAFSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQL 244 (376)
T ss_pred eeccccccceecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHH
Confidence 9999999765432 22344566999999999875 6999999999999999999999999999998888877665
Q ss_pred CccCCCCCCCCC-------------------------------CHHHHHHHHHhcccCccccCCHHHHhcCcccCcCCCC
Q 042823 241 EIDFDTDPWPSI-------------------------------SSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEA 289 (477)
Q Consensus 241 ~~~~~~~~~~~~-------------------------------~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~~~~ 289 (477)
...+..+.||.+ .+++.+|+.++|..||.+|++++++|+|.||.....+
T Consensus 245 cGs~tkevWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~alnh~~F~kdp~p 324 (376)
T KOG0669|consen 245 CGSITKEVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALNHDFFWKDPMP 324 (376)
T ss_pred hccCCcccCCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhchhhhhcCCcc
Confidence 444555555431 3478899999999999999999999999999765433
|
|
| >KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-44 Score=370.11 Aligned_cols=262 Identities=27% Similarity=0.455 Sum_probs=225.6
Q ss_pred ccccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeC
Q 042823 17 AYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDE 96 (477)
Q Consensus 17 ~~~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~ 96 (477)
.-.++.-+|+-+..||.|.||.||.|.+..+|...|+|.+...+.. ......+.+|..++..+ +|||+|++|++-...
T Consensus 1229 ~lsnV~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~-~k~~~~i~eEm~vlE~l-nHpNlV~YyGVEvHR 1306 (1509)
T KOG4645|consen 1229 SLSNVTFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSD-HKTFKLIAEEMKVLEGL-NHPNLVRYYGVEVHR 1306 (1509)
T ss_pred HhccceeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccc-cccCcchHHHHHHHHhc-cCccccccCceeecH
Confidence 3346777889999999999999999999999999999998776554 34567788999999999 799999999999999
Q ss_pred CeEEEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccc
Q 042823 97 TAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALL 176 (477)
Q Consensus 97 ~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~ 176 (477)
..+||-||||+||+|.+.+...+..+|.....+..|++.|+.|||++|||||||||+||++ +.+|.+|++|||.|..
T Consensus 1307 ekv~IFMEyC~~GsLa~ll~~gri~dE~vt~vyt~qll~gla~LH~~gIVHRDIK~aNI~L---d~~g~iK~~DFGsa~k 1383 (1509)
T KOG4645|consen 1307 EKVYIFMEYCEGGSLASLLEHGRIEDEMVTRVYTKQLLEGLAYLHEHGIVHRDIKPANILL---DFNGLIKYGDFGSAVK 1383 (1509)
T ss_pred HHHHHHHHHhccCcHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHhcCceecCCCccceee---ecCCcEEeecccceeE
Confidence 9999999999999999999888888888899999999999999999999999999999999 7888999999999987
Q ss_pred cCCCc-----ceecccccccccchhhhhh----hcCCccchHhHHHHHHHHhhCCCCCCCCC-hhhHHHHHHcCCccCCC
Q 042823 177 FEEGQ-----VYRDIVGSGFYIAPEVLRR----RYGKEIDIWSAGVILYILLSGVPPFWAET-KKGTYDAILQGEIDFDT 246 (477)
Q Consensus 177 ~~~~~-----~~~~~~gt~~y~aPE~~~~----~~~~~~DiwslG~il~~l~tg~~pf~~~~-~~~~~~~i~~~~~~~~~ 246 (477)
..++. ......|||.|||||++.+ ....++|||||||++.||+||+.||.... ...+...+..|..+..+
T Consensus 1384 i~~~~~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne~aIMy~V~~gh~Pq~P 1463 (1509)
T KOG4645|consen 1384 IKNNAQTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNEWAIMYHVAAGHKPQIP 1463 (1509)
T ss_pred ecCchhcCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccchhHHHhHHhccCCCCCc
Confidence 76542 2345789999999999974 35679999999999999999999996643 34444455555443222
Q ss_pred CCCCCCCHHHHHHHHHhcccCccccCCHHHHhcCcccCcC
Q 042823 247 DPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRES 286 (477)
Q Consensus 247 ~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~ 286 (477)
..+|++.++||..||..||..|.++.|+|+|.|-+..
T Consensus 1464 ---~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle~~f~~~~ 1500 (1509)
T KOG4645|consen 1464 ---ERLSSEGRDFLEHCLEQDPKMRWTASQLLEHAFGKSC 1500 (1509)
T ss_pred ---hhhhHhHHHHHHHHHhcCchhhhHHHHHHHhhccccc
Confidence 2489999999999999999999999999999987654
|
|
| >cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-41 Score=318.10 Aligned_cols=248 Identities=21% Similarity=0.291 Sum_probs=208.7
Q ss_pred ccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEE
Q 042823 21 VMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVH 100 (477)
Q Consensus 21 ~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~ 100 (477)
....|.+.+.||+|+||.||+|.++.+++.||+|++.... .....+.+|+.+++.+ +||||+++++++.....++
T Consensus 4 ~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~----~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~ 78 (263)
T cd05052 4 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT----MEVEEFLKEAAVMKEI-KHPNLVQLLGVCTREPPFY 78 (263)
T ss_pred chHHeEEeeecCCcccceEEEEEEecCCceEEEEEecCCc----hHHHHHHHHHHHHHhC-CCCChhheEEEEcCCCCcE
Confidence 3456899999999999999999999999999999886432 2345678899999998 7999999999999999999
Q ss_pred EEEeccCCCchHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccC
Q 042823 101 VVMELCEGGDLFDRIIAK--GYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFE 178 (477)
Q Consensus 101 lv~e~~~gg~L~~~l~~~--~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~ 178 (477)
+||||+++++|.+++... ..+++..+..++.|++.||.|||++|++||||||+||++ ++++.+||+|||.+....
T Consensus 79 lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~nil~---~~~~~~kl~df~~~~~~~ 155 (263)
T cd05052 79 IITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLV---GENHLVKVADFGLSRLMT 155 (263)
T ss_pred EEEEeCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEE---cCCCcEEeCCCccccccc
Confidence 999999999999998764 357889999999999999999999999999999999999 678889999999987654
Q ss_pred CCcce--ecccccccccchhhhhh-hcCCccchHhHHHHHHHHhh-CCCCCCCCChhhHHHHHHcCCccCCCCCCCCCCH
Q 042823 179 EGQVY--RDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQGEIDFDTDPWPSISS 254 (477)
Q Consensus 179 ~~~~~--~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~t-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 254 (477)
..... ....+++.|+|||.+.+ .++.++|||||||++|+|++ |..||.+....+....+..+.. ......+|+
T Consensus 156 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 232 (263)
T cd05052 156 GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKGYR---MERPEGCPP 232 (263)
T ss_pred cceeeccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCC---CCCCCCCCH
Confidence 33221 11234567999998864 58889999999999999998 9999988777666666655321 122246889
Q ss_pred HHHHHHHHhcccCccccCCHHHHhc
Q 042823 255 TAKDLVRRMLTKDPKRRITAAQVLE 279 (477)
Q Consensus 255 ~~~~li~~~l~~dp~~R~s~~~~l~ 279 (477)
.+.+++.+||..+|++|||+.++++
T Consensus 233 ~~~~li~~cl~~~p~~Rp~~~~l~~ 257 (263)
T cd05052 233 KVYELMRACWQWNPSDRPSFAEIHQ 257 (263)
T ss_pred HHHHHHHHHccCCcccCCCHHHHHH
Confidence 9999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays |
| >cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-41 Score=331.46 Aligned_cols=256 Identities=21% Similarity=0.307 Sum_probs=203.6
Q ss_pred cccccccccccccccccCCeEEEEEEEc-----cCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEE
Q 042823 18 YEDVMLHYFFGRMLGRGQFGVSYLCTEN-----STNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKST 92 (477)
Q Consensus 18 ~~~~~~~Y~~~~~iG~G~~g~V~~~~~~-----~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~ 92 (477)
|....++|++.+.||+|+||.||+|++. .+++.||+|++.... .......+.+|+.++.++.+||||++++++
T Consensus 2 ~~~~~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~~E~~~~~~l~~h~niv~~~~~ 79 (337)
T cd05054 2 WEFPRDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGA--TASEYKALMTELKILIHIGHHLNVVNLLGA 79 (337)
T ss_pred cccCHHHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCC--CHHHHHHHHHHHHHHHhhccCcchhheeee
Confidence 3455679999999999999999999753 345789999886432 223345677899999999789999999998
Q ss_pred EEe-CCeEEEEEeccCCCchHHHHHHc-----------------------------------------------------
Q 042823 93 YED-ETAVHVVMELCEGGDLFDRIIAK----------------------------------------------------- 118 (477)
Q Consensus 93 ~~~-~~~~~lv~e~~~gg~L~~~l~~~----------------------------------------------------- 118 (477)
+.. +..++++|||++||+|.+++...
T Consensus 80 ~~~~~~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (337)
T cd05054 80 CTKPGGPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEED 159 (337)
T ss_pred EecCCCCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccc
Confidence 864 45789999999999999988642
Q ss_pred --------CCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCCCcc---eeccc
Q 042823 119 --------GYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQV---YRDIV 187 (477)
Q Consensus 119 --------~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~---~~~~~ 187 (477)
..++...+..++.||+.||.|||++||+||||||+||++ +..+.+||+|||++........ .....
T Consensus 160 ~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivHrDikp~Nill---~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~ 236 (337)
T cd05054 160 EEGDELYKEPLTLEDLISYSFQVARGMEFLASRKCIHRDLAARNILL---SENNVVKICDFGLARDIYKDPDYVRKGDAR 236 (337)
T ss_pred hhhhHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEE---eCCCcEEEeccccchhcccCcchhhccCCC
Confidence 256888899999999999999999999999999999999 5678899999999976533221 12234
Q ss_pred ccccccchhhhh-hhcCCccchHhHHHHHHHHhh-CCCCCCCCChhhHHHHHHcCCccCCCCCCCCCCHHHHHHHHHhcc
Q 042823 188 GSGFYIAPEVLR-RRYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLT 265 (477)
Q Consensus 188 gt~~y~aPE~~~-~~~~~~~DiwslG~il~~l~t-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~ 265 (477)
++..|+|||++. ..++.++|||||||++|+|++ |.+||.+....+.............. ....++++.+++.+||+
T Consensus 237 ~~~~y~aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~cl~ 314 (337)
T cd05054 237 LPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEEFCRRLKEGTRMRA--PEYATPEIYSIMLDCWH 314 (337)
T ss_pred CCccccCcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccHHHHHHHhccCCCCC--CccCCHHHHHHHHHHcc
Confidence 567899999875 468999999999999999998 99999775544433333322222111 13568899999999999
Q ss_pred cCccccCCHHHHhcC
Q 042823 266 KDPKRRITAAQVLEH 280 (477)
Q Consensus 266 ~dp~~R~s~~~~l~h 280 (477)
.+|++||++.++++|
T Consensus 315 ~~p~~RPs~~ell~~ 329 (337)
T cd05054 315 NNPEDRPTFSELVEI 329 (337)
T ss_pred CChhhCcCHHHHHHH
Confidence 999999999999875
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto |
| >cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-41 Score=314.99 Aligned_cols=253 Identities=31% Similarity=0.528 Sum_probs=214.2
Q ss_pred cccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeC--CeEEE
Q 042823 24 HYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDE--TAVHV 101 (477)
Q Consensus 24 ~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~--~~~~l 101 (477)
+|++.+.||+|++|.||+|.+..+++.|++|++...... ......+.+|+.+++++ +||||+++++.+... ..+++
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~~~l 78 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDS-EEELEALEREIRILSSL-QHPNIVRYYGSERDEEKNTLNI 78 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccc-hHHHHHHHHHHHHHHHc-CCCCEeeEEEEEecCCCCeEEE
Confidence 588899999999999999999989999999998654322 34567888999999999 699999999999988 89999
Q ss_pred EEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCCCc
Q 042823 102 VMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQ 181 (477)
Q Consensus 102 v~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~ 181 (477)
|+||+++++|.+++.....+++..+..++.|++.||.|||+.|++|+||+|+||++ ..++.++|+|||.+.......
T Consensus 79 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~h~dl~p~ni~i---~~~~~~~l~d~~~~~~~~~~~ 155 (260)
T cd06606 79 FLEYVSGGSLSSLLKKFGKLPEPVIRKYTRQILEGLAYLHSNGIVHRDIKGANILV---DSDGVVKLADFGCAKRLGDIE 155 (260)
T ss_pred EEEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEE---cCCCCEEEcccccEEeccccc
Confidence 99999999999999888889999999999999999999999999999999999999 667899999999988765543
Q ss_pred c---eecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCCh-hhHHHHHHcCCccCCCCCCCCCCHHH
Q 042823 182 V---YRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETK-KGTYDAILQGEIDFDTDPWPSISSTA 256 (477)
Q Consensus 182 ~---~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~ 256 (477)
. .....++..|+|||.+.+ .++.++||||||+++|+|++|..||..... ......+..... .......++..+
T Consensus 156 ~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l 233 (260)
T cd06606 156 TGEGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGNPMAALYKIGSSGE--PPEIPEHLSEEA 233 (260)
T ss_pred ccccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHhccccCC--CcCCCcccCHHH
Confidence 2 344578899999999875 488999999999999999999999977652 222222222111 111223568999
Q ss_pred HHHHHHhcccCccccCCHHHHhcCccc
Q 042823 257 KDLVRRMLTKDPKRRITAAQVLEHPWL 283 (477)
Q Consensus 257 ~~li~~~l~~dp~~R~s~~~~l~h~~~ 283 (477)
.++|.+||..+|++||++.++++||||
T Consensus 234 ~~~i~~~l~~~p~~Rp~~~~ll~~~~~ 260 (260)
T cd06606 234 KDFLRKCLRRDPKKRPTADELLQHPFL 260 (260)
T ss_pred HHHHHHhCcCChhhCCCHHHHhhCCCC
Confidence 999999999999999999999999997
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK |
| >cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-41 Score=316.55 Aligned_cols=254 Identities=26% Similarity=0.473 Sum_probs=211.2
Q ss_pred ccccccccccccCCeEEEEEEEccCCceEEEEEeecCCc--cchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeC--Ce
Q 042823 23 LHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPK--MRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDE--TA 98 (477)
Q Consensus 23 ~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~--~~ 98 (477)
..|++.+.||+|+||.||+|.+..+++.||+|++..... ........+.+|+.++..+ +||||+++++++.+. ..
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l-~h~~i~~~~~~~~~~~~~~ 80 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNL-RHDRIVQYYGCLRDPEEKK 80 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHc-CCCCcceEEEEEEcCCCCE
Confidence 479999999999999999999999999999998754321 2234456788999999999 799999999998764 56
Q ss_pred EEEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccC
Q 042823 99 VHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFE 178 (477)
Q Consensus 99 ~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~ 178 (477)
+++|+||++|++|.+++...+.+++..+..++.|++.||.|||++|++||||||+||++ +.++.++|+|||.+....
T Consensus 81 ~~~v~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~H~dl~p~ni~i---~~~~~~~l~dfg~~~~~~ 157 (264)
T cd06653 81 LSIFVEYMPGGSIKDQLKAYGALTENVTRRYTRQILQGVSYLHSNMIVHRDIKGANILR---DSAGNVKLGDFGASKRIQ 157 (264)
T ss_pred EEEEEEeCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEE---cCCCCEEECccccccccc
Confidence 89999999999999999888889999999999999999999999999999999999998 677889999999987643
Q ss_pred CC----cceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCCCC
Q 042823 179 EG----QVYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSIS 253 (477)
Q Consensus 179 ~~----~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 253 (477)
.. .......|+..|+|||.+.+ .++.++|+|||||++|+|++|.+||..........++..... .....+.++
T Consensus 158 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~--~~~~p~~~~ 235 (264)
T cd06653 158 TICMSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEAMAAIFKIATQPT--KPMLPDGVS 235 (264)
T ss_pred cccccCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHcCCC--CCCCCcccC
Confidence 21 11233568899999999865 478899999999999999999999977655544444433221 122235688
Q ss_pred HHHHHHHHHhcccCccccCCHHHHhcCccc
Q 042823 254 STAKDLVRRMLTKDPKRRITAAQVLEHPWL 283 (477)
Q Consensus 254 ~~~~~li~~~l~~dp~~R~s~~~~l~h~~~ 283 (477)
+.+.++|.+||. +|..||++.+++.|||.
T Consensus 236 ~~~~~~i~~~l~-~~~~r~~~~~~~~~~~~ 264 (264)
T cd06653 236 DACRDFLKQIFV-EEKRRPTAEFLLRHPFV 264 (264)
T ss_pred HHHHHHHHHHhc-CcccCccHHHHhcCCCC
Confidence 999999999999 57999999999999984
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho |
| >cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-41 Score=321.84 Aligned_cols=259 Identities=22% Similarity=0.274 Sum_probs=209.8
Q ss_pred ccccccccccccccccCCeEEEEEEEcc-----CCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEE
Q 042823 19 EDVMLHYFFGRMLGRGQFGVSYLCTENS-----TNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTY 93 (477)
Q Consensus 19 ~~~~~~Y~~~~~iG~G~~g~V~~~~~~~-----~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~ 93 (477)
+...++|++.+.||+|+||.||+|.++. .+..||+|.+..... ......+.+|+.++..+ +||||+++++++
T Consensus 2 ~~~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~ 78 (288)
T cd05061 2 EVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESAS--LRERIEFLNEASVMKGF-TCHHVVRLLGVV 78 (288)
T ss_pred cccHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCC--HHHHHHHHHHHHHHHhC-CCCCeeeEEEEE
Confidence 4567899999999999999999997652 345799998764322 22344577899999888 799999999999
Q ss_pred EeCCeEEEEEeccCCCchHHHHHHcC----------CCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCC
Q 042823 94 EDETAVHVVMELCEGGDLFDRIIAKG----------YNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDN 163 (477)
Q Consensus 94 ~~~~~~~lv~e~~~gg~L~~~l~~~~----------~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~ 163 (477)
......|+||||+++|+|.+++...+ ..+...+..++.|++.||.|||++||+||||||+||++ +.+
T Consensus 79 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dikp~nili---~~~ 155 (288)
T cd05061 79 SKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMV---AHD 155 (288)
T ss_pred cCCCCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCCChheEEE---cCC
Confidence 99999999999999999999997532 23567788999999999999999999999999999999 677
Q ss_pred CCEEEeecCCccccCCCcc---eecccccccccchhhhh-hhcCCccchHhHHHHHHHHhh-CCCCCCCCChhhHHHHHH
Q 042823 164 ALLKVTDFGSALLFEEGQV---YRDIVGSGFYIAPEVLR-RRYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAIL 238 (477)
Q Consensus 164 ~~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~l~t-g~~pf~~~~~~~~~~~i~ 238 (477)
+.+||+|||++........ .....++..|+|||.+. +.++.++|||||||++|+|++ |.+||.+....+....+.
T Consensus 156 ~~~~L~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~~~~~~~~ 235 (288)
T cd05061 156 FTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVM 235 (288)
T ss_pred CcEEECcCCccccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH
Confidence 8899999999875432221 11224567799999986 468999999999999999998 789998877766666665
Q ss_pred cCCccCCCCCCCCCCHHHHHHHHHhcccCccccCCHHHHhc------CcccCcC
Q 042823 239 QGEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLE------HPWLRES 286 (477)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~------h~~~~~~ 286 (477)
.+..... ...+++.+.+++.+||+.+|++|||+.++++ ||||...
T Consensus 236 ~~~~~~~---~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~~~~~~ 286 (288)
T cd05061 236 DGGYLDQ---PDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPSFPEV 286 (288)
T ss_pred cCCCCCC---CCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhcCCCCCCC
Confidence 5432211 1346789999999999999999999999987 8888653
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta |
| >cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-41 Score=324.56 Aligned_cols=253 Identities=29% Similarity=0.462 Sum_probs=209.4
Q ss_pred ccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeC--CeEEEE
Q 042823 25 YFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDE--TAVHVV 102 (477)
Q Consensus 25 Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~--~~~~lv 102 (477)
|.+.+.||+|+||.||+|.+..+++.+|+|++.... ........+.+|+.+++.+ +|||++++++++... ...|+|
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~-~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~~~lv 78 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMEN-EKEGFPITAIREIKLLQKL-RHPNIVRLKEIVTSKGKGSIYMV 78 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEeccc-ccccchHHHHHHHHHHHhc-cCCCeeeheeeEecCCCCcEEEE
Confidence 778899999999999999999999999999997653 1223345677899999999 699999999999988 899999
Q ss_pred EeccCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCCCc
Q 042823 103 MELCEGGDLFDRIIAK-GYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQ 181 (477)
Q Consensus 103 ~e~~~gg~L~~~l~~~-~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~ 181 (477)
|||+++ +|.+++... ..+++..+..++.||+.||.|||+.|++|+||+|+||++ ++++.+||+|||.+.......
T Consensus 79 ~e~~~~-~l~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~~~h~dl~p~nil~---~~~~~~~l~d~g~~~~~~~~~ 154 (287)
T cd07840 79 FEYMDH-DLTGLLDSPEVKFTESQIKCYMKQLLEGLQYLHSNGILHRDIKGSNILI---NNDGVLKLADFGLARPYTKRN 154 (287)
T ss_pred eccccc-cHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEE---cCCCCEEEccccceeeccCCC
Confidence 999975 898888765 578999999999999999999999999999999999999 778899999999987664432
Q ss_pred --ceecccccccccchhhhhh--hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCC--------
Q 042823 182 --VYRDIVGSGFYIAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPW-------- 249 (477)
Q Consensus 182 --~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~-------- 249 (477)
......++..|+|||.+.+ .++.++||||||+++|+|++|..||...........+...........|
T Consensus 155 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (287)
T cd07840 155 SADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSPTDENWPGVSKLPW 234 (287)
T ss_pred cccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchhhccccccchh
Confidence 2233467889999998754 4789999999999999999999999877765555544432111111111
Q ss_pred ------------------CC-CCHHHHHHHHHhcccCccccCCHHHHhcCccc
Q 042823 250 ------------------PS-ISSTAKDLVRRMLTKDPKRRITAAQVLEHPWL 283 (477)
Q Consensus 250 ------------------~~-~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~ 283 (477)
.. +++.+.+++.+||..+|++||++.++++||||
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~~~~ 287 (287)
T cd07840 235 FENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQHEYF 287 (287)
T ss_pred hhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhhCcCC
Confidence 11 38899999999999999999999999999997
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po |
| >cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-41 Score=322.37 Aligned_cols=247 Identities=21% Similarity=0.329 Sum_probs=207.3
Q ss_pred ccccccccccccCCeEEEEEEEc-----cCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCC
Q 042823 23 LHYFFGRMLGRGQFGVSYLCTEN-----STNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDET 97 (477)
Q Consensus 23 ~~Y~~~~~iG~G~~g~V~~~~~~-----~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~ 97 (477)
..|.+.+.||+|+||.||++.+. .++..+|+|.+.... ......+.+|+.++..+ +||||+++++++....
T Consensus 5 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~---~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~ 80 (288)
T cd05093 5 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDAS---DNARKDFHREAELLTNL-QHEHIVKFYGVCVEGD 80 (288)
T ss_pred HHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcC---HHHHHHHHHHHHHHHhC-CCCCcceEEEEEecCC
Confidence 47899999999999999999852 345678999875432 23456788999999999 7999999999999999
Q ss_pred eEEEEEeccCCCchHHHHHHcC-------------CCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCC
Q 042823 98 AVHVVMELCEGGDLFDRIIAKG-------------YNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNA 164 (477)
Q Consensus 98 ~~~lv~e~~~gg~L~~~l~~~~-------------~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~ 164 (477)
.+|+||||+++++|.+++...+ .+++..+..++.|++.||.|||++|++||||||+||++ +..+
T Consensus 81 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~i~H~dlkp~Nili---~~~~ 157 (288)
T cd05093 81 PLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLV---GENL 157 (288)
T ss_pred ccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEE---ccCC
Confidence 9999999999999999997543 38999999999999999999999999999999999999 6788
Q ss_pred CEEEeecCCccccCCCcc---eecccccccccchhhhhh-hcCCccchHhHHHHHHHHhh-CCCCCCCCChhhHHHHHHc
Q 042823 165 LLKVTDFGSALLFEEGQV---YRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQ 239 (477)
Q Consensus 165 ~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~t-g~~pf~~~~~~~~~~~i~~ 239 (477)
.+||+|||++........ .....+++.|+|||++.+ .++.++|||||||++|+|++ |.+||...........+..
T Consensus 158 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~~~~~~i~~ 237 (288)
T cd05093 158 LVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQ 237 (288)
T ss_pred cEEeccCCccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc
Confidence 999999999875532221 122345778999999874 58899999999999999998 9999988877777777777
Q ss_pred CCccCCCCCCCCCCHHHHHHHHHhcccCccccCCHHHHhc
Q 042823 240 GEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLE 279 (477)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~ 279 (477)
+..... ...+++++.+++.+||+.||.+|||+.+++.
T Consensus 238 ~~~~~~---~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~ 274 (288)
T cd05093 238 GRVLQR---PRTCPKEVYDLMLGCWQREPHMRLNIKEIHS 274 (288)
T ss_pred CCcCCC---CCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence 653321 1357899999999999999999999999854
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly |
| >cd05122 PKc_STE Catalytic domain of STE family Protein Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-41 Score=313.14 Aligned_cols=251 Identities=29% Similarity=0.477 Sum_probs=212.6
Q ss_pred cccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEE
Q 042823 24 HYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVVM 103 (477)
Q Consensus 24 ~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~lv~ 103 (477)
+|.+.+.||+|++|.||+|.+..+++.+++|++..... .....+.+|+.++..+ .||||+++++++......++++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~---~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~l~~ 76 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESK---EKKEKIINEIQILKKC-KHPNIVKYYGSYLKKDELWIVM 76 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccch---hHHHHHHHHHHHHHhC-CCCCEeEEEEEEecCCeEEEEE
Confidence 48889999999999999999988999999999865432 3456788999999999 5999999999999999999999
Q ss_pred eccCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCCCcc
Q 042823 104 ELCEGGDLFDRIIAK-GYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQV 182 (477)
Q Consensus 104 e~~~gg~L~~~l~~~-~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~ 182 (477)
||++|++|.+++... ..+++..+..++.|++.||.+||++|++||||+|+||++ +..+.++|+|||.+........
T Consensus 77 e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~i~h~dl~p~ni~i---~~~~~~~l~d~~~~~~~~~~~~ 153 (253)
T cd05122 77 EFCSGGSLKDLLKSTNQTLTESQIAYVCKELLKGLEYLHSNGIIHRDIKAANILL---TSDGEVKLIDFGLSAQLSDTKA 153 (253)
T ss_pred ecCCCCcHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhcCCEecCCCCHHHEEE---ccCCeEEEeecccccccccccc
Confidence 999999999998876 678999999999999999999999999999999999999 6678899999999877655432
Q ss_pred eecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCCCCHHHHHHHH
Q 042823 183 YRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVR 261 (477)
Q Consensus 183 ~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~ 261 (477)
.....|+..|+|||.+.+ .++.++||||||+++|+|++|..||...+................. ....++..+.++|.
T Consensus 154 ~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~ 232 (253)
T cd05122 154 RNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPMKALFKIATNGPPGLR-NPEKWSDEFKDFLK 232 (253)
T ss_pred ccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhcCCCCcC-cccccCHHHHHHHH
Confidence 345578899999999864 4788999999999999999999999876554444444332221111 11224889999999
Q ss_pred HhcccCccccCCHHHHhcCcc
Q 042823 262 RMLTKDPKRRITAAQVLEHPW 282 (477)
Q Consensus 262 ~~l~~dp~~R~s~~~~l~h~~ 282 (477)
+||+.||++|||+.++++|||
T Consensus 233 ~~l~~~p~~R~t~~~~l~~~~ 253 (253)
T cd05122 233 KCLQKNPEKRPTAEQLLKHPF 253 (253)
T ss_pred HHccCChhhCCCHHHHhcCCC
Confidence 999999999999999999998
|
Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core |
| >cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-41 Score=315.86 Aligned_cols=245 Identities=22% Similarity=0.339 Sum_probs=205.9
Q ss_pred ccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 042823 23 LHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVV 102 (477)
Q Consensus 23 ~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~lv 102 (477)
++|++.+.||+|+||.||+|.++. +..+|+|.+..... ....+.+|+.+++.+ +||||+++++++......|+|
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~-~~~~a~K~~~~~~~----~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~iv 77 (256)
T cd05114 4 SELTFMKELGSGQFGVVHLGKWRA-QIKVAIKAINEGAM----SEEDFIEEAKVMMKL-SHPKLVQLYGVCTQQKPLYIV 77 (256)
T ss_pred HHcEEeeEecCCcCceEEEEEecc-CceEEEEecccCCc----cHHHHHHHHHHHHHC-CCCCceeEEEEEccCCCEEEE
Confidence 468899999999999999998754 56799998754321 235678899999999 799999999999999999999
Q ss_pred EeccCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCCCc
Q 042823 103 MELCEGGDLFDRIIAK-GYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQ 181 (477)
Q Consensus 103 ~e~~~gg~L~~~l~~~-~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~ 181 (477)
|||++||+|.+++... +.+++..+..++.|++.||.|||++|++||||||+||++ +.++.+||+|||.+.......
T Consensus 78 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i---~~~~~~kl~d~g~~~~~~~~~ 154 (256)
T cd05114 78 TEFMENGCLLNYLRQRQGKLSKDMLLSMCQDVCEGMEYLERNSFIHRDLAARNCLV---SSTGVVKVSDFGMTRYVLDDE 154 (256)
T ss_pred EEcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcceEEE---cCCCeEEECCCCCccccCCCc
Confidence 9999999999998753 568999999999999999999999999999999999999 677889999999887653322
Q ss_pred ce--ecccccccccchhhhhh-hcCCccchHhHHHHHHHHhh-CCCCCCCCChhhHHHHHHcCCccCCCCCCCCCCHHHH
Q 042823 182 VY--RDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAK 257 (477)
Q Consensus 182 ~~--~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~t-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 257 (477)
.. ....++..|+|||++.+ .++.++||||+|+++|+|++ |.+||...+..+....+..+.....+ ...+..+.
T Consensus 155 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~~~~~~i~~~~~~~~~---~~~~~~~~ 231 (256)
T cd05114 155 YTSSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYEVVEMISRGFRLYRP---KLASMTVY 231 (256)
T ss_pred eeccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCCCCCC---CCCCHHHH
Confidence 21 12234567999999864 68899999999999999999 99999888877777777765433222 24678899
Q ss_pred HHHHHhcccCccccCCHHHHhc
Q 042823 258 DLVRRMLTKDPKRRITAAQVLE 279 (477)
Q Consensus 258 ~li~~~l~~dp~~R~s~~~~l~ 279 (477)
+++.+||+.+|++|||+.++++
T Consensus 232 ~li~~c~~~~p~~Rps~~~l~~ 253 (256)
T cd05114 232 EVMYSCWHEKPEGRPTFAELLR 253 (256)
T ss_pred HHHHHHccCCcccCcCHHHHHH
Confidence 9999999999999999999975
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h |
| >cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-42 Score=334.43 Aligned_cols=265 Identities=28% Similarity=0.433 Sum_probs=216.5
Q ss_pred cccccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEe
Q 042823 16 KAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYED 95 (477)
Q Consensus 16 ~~~~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~ 95 (477)
+....+.++|++.+.||+|++|.||+|.+..+++.||+|++..... .......+.+|+.+++.+ +||||+++.+++..
T Consensus 8 ~~~~~~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~ 85 (343)
T cd07851 8 KTVWEVPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQ-SAIHAKRTYRELRLLKHM-DHENVIGLLDVFTP 85 (343)
T ss_pred cceecccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccc-hhhHHHHHHHHHHHHHhc-cCCCHHHHHHHhhc
Confidence 3455678899999999999999999999999999999998864321 223345677899999998 79999999988866
Q ss_pred CCe------EEEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEe
Q 042823 96 ETA------VHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVT 169 (477)
Q Consensus 96 ~~~------~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~ 169 (477)
... +|+|+||+ |++|.+++.. ..+++..+..++.|++.||.|||+.||+||||||+||++ +.++.+||+
T Consensus 86 ~~~~~~~~~~~lv~e~~-~~~L~~~~~~-~~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nill---~~~~~~kL~ 160 (343)
T cd07851 86 ASSLEDFQDVYLVTHLM-GADLNNIVKC-QKLSDDHIQFLVYQILRGLKYIHSAGIIHRDLKPSNIAV---NEDCELKIL 160 (343)
T ss_pred cccccccccEEEEEecC-CCCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEE---CCCCCEEEc
Confidence 554 89999999 5699888765 568999999999999999999999999999999999999 677889999
Q ss_pred ecCCccccCCCcceecccccccccchhhhhh--hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCC--
Q 042823 170 DFGSALLFEEGQVYRDIVGSGFYIAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFD-- 245 (477)
Q Consensus 170 Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~-- 245 (477)
|||++...... .....+++.|+|||.+.+ .++.++|||||||++|+|++|.+||.+......+..+.......+
T Consensus 161 dfg~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~ 238 (343)
T cd07851 161 DFGLARHTDDE--MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVGTPDEE 238 (343)
T ss_pred ccccccccccc--ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHH
Confidence 99998765432 234578899999999864 578899999999999999999999987766555554433211000
Q ss_pred ---------------------C----CCCCCCCHHHHHHHHHhcccCccccCCHHHHhcCcccCcCCCC
Q 042823 246 ---------------------T----DPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEA 289 (477)
Q Consensus 246 ---------------------~----~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~~~~ 289 (477)
. ..++.+++.+.++|.+||+.+|++|||+.++++||||......
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~h~~~~~~~~~ 307 (343)
T cd07851 239 LLQKISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALAHPYLAEYHDP 307 (343)
T ss_pred HHhhccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhcCCCccccCCC
Confidence 0 0123468999999999999999999999999999999876443
|
Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK |
| >cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-41 Score=313.24 Aligned_cols=252 Identities=30% Similarity=0.486 Sum_probs=216.4
Q ss_pred cccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEE
Q 042823 24 HYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVVM 103 (477)
Q Consensus 24 ~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~lv~ 103 (477)
+|.+.+.||+|++|.||+|.+..+++.||+|.+..... .......+.+|+.++.++ +|||++++++++.+.+.+|+||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~~v~ 78 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKI-KEEALKSIMQEIDLLKNL-KHPNIVKYIGSIETSDSLYIIL 78 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEeccccc-CHHHHHHHHHHHHHHHhC-CCCCccEEEEEEEeCCEEEEEE
Confidence 58899999999999999999999999999999876532 234567789999999999 7999999999999999999999
Q ss_pred eccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCCCcc-
Q 042823 104 ELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQV- 182 (477)
Q Consensus 104 e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~- 182 (477)
||+++++|.+++.....+++..+..++.|++.||.|||++|++||||+|+||++ +..+.++|+|||.+........
T Consensus 79 e~~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i---~~~~~~~l~d~~~~~~~~~~~~~ 155 (254)
T cd06627 79 EYAENGSLRQIIKKFGPFPESLVAVYVYQVLQGLAYLHEQGVIHRDIKAANILT---TKDGVVKLADFGVATKLNDVSKD 155 (254)
T ss_pred ecCCCCcHHHHHHhccCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEE---CCCCCEEEeccccceecCCCccc
Confidence 999999999999888889999999999999999999999999999999999999 5678899999999887654332
Q ss_pred eecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCCCCHHHHHHHH
Q 042823 183 YRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVR 261 (477)
Q Consensus 183 ~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~ 261 (477)
.....++..|+|||...+ .++.++||||+|+++|+|++|..||................. ....+.+++.+.+++.
T Consensus 156 ~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~i~ 232 (254)
T cd06627 156 DASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNPMAALFRIVQDDH---PPLPEGISPELKDFLM 232 (254)
T ss_pred ccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhccCC---CCCCCCCCHHHHHHHH
Confidence 234568899999999864 478899999999999999999999987665444444433222 1223467899999999
Q ss_pred HhcccCccccCCHHHHhcCccc
Q 042823 262 RMLTKDPKRRITAAQVLEHPWL 283 (477)
Q Consensus 262 ~~l~~dp~~R~s~~~~l~h~~~ 283 (477)
+||..+|++|||+.+++.||||
T Consensus 233 ~~l~~~p~~R~~~~~~l~~~~~ 254 (254)
T cd06627 233 QCFQKDPNLRPTAKQLLKHPWI 254 (254)
T ss_pred HHHhCChhhCcCHHHHhcCCCC
Confidence 9999999999999999999997
|
Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast |
| >cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-42 Score=333.90 Aligned_cols=259 Identities=32% Similarity=0.456 Sum_probs=216.4
Q ss_pred cccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCC-----e
Q 042823 24 HYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDET-----A 98 (477)
Q Consensus 24 ~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~-----~ 98 (477)
+|++.+.||+|++|.||+|.+..+++.||+|.+..... .......+.+|+.+++.+ +||||+++++++.... .
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~~~~ 78 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFD-DLIDAKRILREIKLLRHL-RHENIIGLLDILRPPSPEDFND 78 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccc-cchhhhhHHHHHHHHHhc-CCcchhhhhhhhcccCcccccc
Confidence 68999999999999999999998999999999865321 223456788899999999 6999999999998775 7
Q ss_pred EEEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccC
Q 042823 99 VHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFE 178 (477)
Q Consensus 99 ~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~ 178 (477)
+|+||||+++ +|.+++.....+++..+..++.||+.||.|||++|++||||||+||++ +.++.++|+|||++....
T Consensus 79 ~~lv~e~~~~-~l~~~l~~~~~l~~~~~~~i~~~l~~~l~~LH~~gi~H~dlkp~nili---~~~~~~~L~dfg~~~~~~ 154 (330)
T cd07834 79 VYIVTELMET-DLHKVIKSPQPLTDDHIQYFLYQILRGLKYLHSANVIHRDLKPSNILV---NSNCDLKICDFGLARGVD 154 (330)
T ss_pred eEEEecchhh-hHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE---cCCCCEEEcccCceEeec
Confidence 9999999974 899999888889999999999999999999999999999999999999 677899999999998765
Q ss_pred CCc----ceecccccccccchhhhhh--hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCC------
Q 042823 179 EGQ----VYRDIVGSGFYIAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDT------ 246 (477)
Q Consensus 179 ~~~----~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~------ 246 (477)
... ......+++.|+|||++.+ .++.++|+||+|+++|+|++|.+||.+.+..+....+.........
T Consensus 155 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 234 (330)
T cd07834 155 PDEDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEEDLKFI 234 (330)
T ss_pred ccccccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHhcCCCChhHhhhc
Confidence 432 2344578999999999864 5788999999999999999999999887766555544432111000
Q ss_pred ---------------------CCCCCCCHHHHHHHHHhcccCccccCCHHHHhcCcccCcCCC
Q 042823 247 ---------------------DPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGE 288 (477)
Q Consensus 247 ---------------------~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~~~ 288 (477)
...+.+++.+.++|.+||+++|++|||+.++++||||+....
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~~~ 297 (330)
T cd07834 235 TSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHPYLAQLHD 297 (330)
T ss_pred cccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhCccHHhhcc
Confidence 012346889999999999999999999999999999986543
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and |
| >cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-41 Score=323.66 Aligned_cols=258 Identities=19% Similarity=0.291 Sum_probs=210.3
Q ss_pred ccccccccccccccccccccCCeEEEEEEEcc-------CCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCee
Q 042823 15 GKAYEDVMLHYFFGRMLGRGQFGVSYLCTENS-------TNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVV 87 (477)
Q Consensus 15 ~~~~~~~~~~Y~~~~~iG~G~~g~V~~~~~~~-------~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv 87 (477)
.+.++...++|.+.+.||+|+||.||+|.+.. +...+|+|.+.... .......+.+|+.++..+.+||||+
T Consensus 10 ~~~~~~~~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~e~~~l~~l~~h~~i~ 87 (307)
T cd05098 10 DPRWEVPRDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDA--TEKDLSDLISEMEMMKMIGKHKNII 87 (307)
T ss_pred CCcceeehHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCC--ChHHHHHHHHHHHHHHHhcCCCCEe
Confidence 34566677899999999999999999998643 23579999886432 2234456788999999997799999
Q ss_pred EEEEEEEeCCeEEEEEeccCCCchHHHHHHcC----------------CCCHHHHHHHHHHHHHHHHHHHHcCCeeccCC
Q 042823 88 EFKSTYEDETAVHVVMELCEGGDLFDRIIAKG----------------YNSERDAATVLRAIVNAVNVCHSMGVMHRDLK 151 (477)
Q Consensus 88 ~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~----------------~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlk 151 (477)
++++++......|+||||+++|+|.+++.... .++..++..++.|++.||.|||++|++|||||
T Consensus 88 ~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlk 167 (307)
T cd05098 88 NLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKKCIHRDLA 167 (307)
T ss_pred eEEEEEecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCccccccc
Confidence 99999999999999999999999999997642 37888999999999999999999999999999
Q ss_pred CCceeeeecCCCCCEEEeecCCccccCCCcc---eecccccccccchhhhhh-hcCCccchHhHHHHHHHHhh-CCCCCC
Q 042823 152 PENFSFISRDDNALLKVTDFGSALLFEEGQV---YRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLS-GVPPFW 226 (477)
Q Consensus 152 p~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~t-g~~pf~ 226 (477)
|+||++ +.++.+||+|||.+........ .....+++.|+|||++.+ .++.++|||||||++|+|++ |.+||.
T Consensus 168 p~Nill---~~~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~ 244 (307)
T cd05098 168 ARNVLV---TEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYP 244 (307)
T ss_pred HHheEE---cCCCcEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCC
Confidence 999999 6778999999999875533211 111234568999999864 58899999999999999998 899998
Q ss_pred CCChhhHHHHHHcCCccCCCCCCCCCCHHHHHHHHHhcccCccccCCHHHHhcC
Q 042823 227 AETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEH 280 (477)
Q Consensus 227 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h 280 (477)
+....+....+..+.. . .....++.++.+++.+||..+|++|||+.+++++
T Consensus 245 ~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~ 295 (307)
T cd05098 245 GVPVEELFKLLKEGHR-M--DKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVED 295 (307)
T ss_pred cCCHHHHHHHHHcCCC-C--CCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHH
Confidence 7776666655554432 1 2224678999999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-41 Score=325.30 Aligned_cols=259 Identities=29% Similarity=0.439 Sum_probs=210.2
Q ss_pred ccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCC-
Q 042823 19 EDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDET- 97 (477)
Q Consensus 19 ~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~- 97 (477)
+...++|++.+.||+|+||.||+|.++.+++.||+|++...... ......+.+|+.+++.+ +||||+++++++.+..
T Consensus 3 ~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~-~~~~~~~~~e~~~~~~l-~h~~i~~~~~~~~~~~~ 80 (302)
T cd07864 3 KRCVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEK-EGFPITAIREIKILRQL-NHRNIVNLKEIVTDKQD 80 (302)
T ss_pred hhhhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccc-cCchHHHHHHHHHHHhC-CCCCeeeeeheecCcch
Confidence 45667899999999999999999999999999999998654321 22334567899999999 7999999999987654
Q ss_pred ---------eEEEEEeccCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEE
Q 042823 98 ---------AVHVVMELCEGGDLFDRIIAK-GYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLK 167 (477)
Q Consensus 98 ---------~~~lv~e~~~gg~L~~~l~~~-~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~k 167 (477)
.+|+|+||+++ +|.+.+... ..+++..+..++.|++.||.|||+.||+||||||+||++ +.++.+|
T Consensus 81 ~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili---~~~~~~k 156 (302)
T cd07864 81 ALDFKKDKGAFYLVFEYMDH-DLMGLLESGLVHFSEDHIKSFMKQLLEGLNYCHKKNFLHRDIKCSNILL---NNKGQIK 156 (302)
T ss_pred hhhccccCCcEEEEEcccCc-cHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE---CCCCcEE
Confidence 89999999986 777777654 468999999999999999999999999999999999998 7788999
Q ss_pred EeecCCccccCCCc--ceecccccccccchhhhhh--hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCcc
Q 042823 168 VTDFGSALLFEEGQ--VYRDIVGSGFYIAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEID 243 (477)
Q Consensus 168 l~Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~ 243 (477)
|+|||.+....... ......+++.|+|||.+.+ .++.++||||+||++|+|++|++||........+..+.+....
T Consensus 157 l~dfg~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~~~~~~~~~~~~ 236 (302)
T cd07864 157 LADFGLARLYNSEESRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQELAQLELISRLCGS 236 (302)
T ss_pred eCcccccccccCCcccccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCC
Confidence 99999987654322 1222356788999998854 4788999999999999999999999876655554444332110
Q ss_pred CCC--------------------------CCCCCCCHHHHHHHHHhcccCccccCCHHHHhcCccc
Q 042823 244 FDT--------------------------DPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWL 283 (477)
Q Consensus 244 ~~~--------------------------~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~ 283 (477)
... ..+..+|..+.++|.+||+.+|++|||+.+++.||||
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~~~~ 302 (302)
T cd07864 237 PCPAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALNSPWL 302 (302)
T ss_pred CChhhcccccccccccccccccccccchhhhcCCCCHHHHHHHHHHccCChhhCCCHHHHhcCCCC
Confidence 000 1123578999999999999999999999999999997
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely |
| >cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-41 Score=354.56 Aligned_cols=150 Identities=26% Similarity=0.426 Sum_probs=136.6
Q ss_pred cccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEE
Q 042823 22 MLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHV 101 (477)
Q Consensus 22 ~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~l 101 (477)
.++|.+++.||+|+||.||+|.+..+++.||+|++.+...........+..|+.++..+ +||||+++++++.....+|+
T Consensus 3 ~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l-~hp~Iv~~~~~~~~~~~~~l 81 (669)
T cd05610 3 IEEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALS-KSPFIVHLYYSLQSANNVYL 81 (669)
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhc-CCCCcCeEEEEEEECCEEEE
Confidence 46899999999999999999999999999999999765444444556788899998888 79999999999999999999
Q ss_pred EEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCcc
Q 042823 102 VMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSAL 175 (477)
Q Consensus 102 v~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~ 175 (477)
||||+.|++|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||+ +..+.+||+|||++.
T Consensus 82 VmEy~~g~~L~~li~~~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKP~NILl---~~~g~vkL~DFGls~ 152 (669)
T cd05610 82 VMEYLIGGDVKSLLHIYGYFDEEMAVKYISEVALALDYLHRHGIIHRDLKPDNMLI---SNEGHIKLTDFGLSK 152 (669)
T ss_pred EEeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCccHHHEEE---cCCCCEEEEeCCCCc
Confidence 99999999999999888889999999999999999999999999999999999999 677899999999874
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481 |
| >cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-41 Score=329.87 Aligned_cols=254 Identities=19% Similarity=0.287 Sum_probs=201.2
Q ss_pred cccccc--CCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEecc
Q 042823 29 RMLGRG--QFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVVMELC 106 (477)
Q Consensus 29 ~~iG~G--~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~lv~e~~ 106 (477)
..||.| +||+||+|.+..+|+.||+|++..... .....+.+.+|+.++..+ +||||++++++|..+...|+||||+
T Consensus 4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~e~~~~~~l-~h~niv~~~~~~~~~~~~~~v~e~~ 81 (328)
T cd08226 4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENC-TEEHLKALQNEVVLSHFF-RHPNIMTSWTVFTTGSWLWVISPFM 81 (328)
T ss_pred HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccC-CHHHHHHHHHHHHHHHhC-CCCCcceEeeeEecCCceEEEEecc
Confidence 457777 999999999999999999999865432 233456788899988878 7999999999999999999999999
Q ss_pred CCCchHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCCCc---
Q 042823 107 EGGDLFDRIIAK--GYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQ--- 181 (477)
Q Consensus 107 ~gg~L~~~l~~~--~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~--- 181 (477)
.+|+|.+++.+. ..+++..+..++.|++.||.|||++|++||||||+||++ +..+.++++||+.+.......
T Consensus 82 ~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivHrDlkp~Nill---~~~~~~~~~~~~~~~~~~~~~~~~ 158 (328)
T cd08226 82 AYGSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQNGYIHRNIKASHILI---SGDGLVSLSGLSHLYSLVRNGQKA 158 (328)
T ss_pred cCCCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE---eCCCcEEEechHHHhhhhccCccc
Confidence 999999988764 348999999999999999999999999999999999999 567789999998553321110
Q ss_pred -ce----ecccccccccchhhhhh---hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCC--------
Q 042823 182 -VY----RDIVGSGFYIAPEVLRR---RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFD-------- 245 (477)
Q Consensus 182 -~~----~~~~gt~~y~aPE~~~~---~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~-------- 245 (477)
.. ....++..|+|||++.+ .++.++||||+||++|+|++|.+||...................+
T Consensus 159 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (328)
T cd08226 159 KVVYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQKLKGPPYSPLDITTFPC 238 (328)
T ss_pred cccccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHHHhcCCCCCCccccccch
Confidence 00 11234567999999864 378899999999999999999999977655444433332211000
Q ss_pred -----------------------------------CCCCCCCCHHHHHHHHHhcccCccccCCHHHHhcCcccCcCC
Q 042823 246 -----------------------------------TDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESG 287 (477)
Q Consensus 246 -----------------------------------~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~~ 287 (477)
.+....+++.+.+|+++||+.||++|||+.++|+||||+...
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~~~~~~~~ 315 (328)
T cd08226 239 EESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLSHAFFKQVK 315 (328)
T ss_pred hhhhhccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhhCHHHHHHH
Confidence 001123567899999999999999999999999999997643
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig |
| >cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-41 Score=314.94 Aligned_cols=246 Identities=21% Similarity=0.282 Sum_probs=206.4
Q ss_pred ccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 042823 23 LHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVV 102 (477)
Q Consensus 23 ~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~lv 102 (477)
++|++.+.||+|+||+||+|.+.. +..+|+|.+..... ....+.+|+.++..+ +||||+++++++.....+|+|
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~-~~~~aik~~~~~~~----~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv 77 (256)
T cd05113 4 KDLTFLKELGTGQFGVVKYGKWRG-QYDVAIKMIKEGSM----SEDEFIEEAKVMMKL-SHEKLVQLYGVCTKQRPIYIV 77 (256)
T ss_pred HHeEEeeEecCcccceEEEEEecC-CCcEEEEEcCCCcc----cHHHHHHHHHHHhcC-CCCCeeeEEEEEccCCCcEEE
Confidence 579999999999999999998753 45699998864321 235678899999999 799999999999999999999
Q ss_pred EeccCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCCCc
Q 042823 103 MELCEGGDLFDRIIAK-GYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQ 181 (477)
Q Consensus 103 ~e~~~gg~L~~~l~~~-~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~ 181 (477)
|||+++|+|.+++... ..+++..+..++.||+.||.|||+.|++|+||||+||++ +.++.+||+|||.+.......
T Consensus 78 ~e~~~~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~nili---~~~~~~kl~d~g~~~~~~~~~ 154 (256)
T cd05113 78 TEYMSNGCLLNYLREHGKRFQPSQLLEMCKDVCEGMAYLESKQFIHRDLAARNCLV---DDQGCVKVSDFGLSRYVLDDE 154 (256)
T ss_pred EEcCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEE---cCCCCEEECCCccceecCCCc
Confidence 9999999999998764 468999999999999999999999999999999999999 677889999999887654332
Q ss_pred ce--ecccccccccchhhhhh-hcCCccchHhHHHHHHHHhh-CCCCCCCCChhhHHHHHHcCCccCCCCCCCCCCHHHH
Q 042823 182 VY--RDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAK 257 (477)
Q Consensus 182 ~~--~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~t-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 257 (477)
.. ....++..|+|||.+.+ .++.++|||||||++|+|++ |..||...+.......+.++...... ...++.++
T Consensus 155 ~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ 231 (256)
T cd05113 155 YTSSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSETVEKVSQGLRLYRP---HLASEKVY 231 (256)
T ss_pred eeecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHhcCCCCCCC---CCCCHHHH
Confidence 21 12235567999999864 68899999999999999998 99999887777777777665443222 24688999
Q ss_pred HHHHHhcccCccccCCHHHHhcC
Q 042823 258 DLVRRMLTKDPKRRITAAQVLEH 280 (477)
Q Consensus 258 ~li~~~l~~dp~~R~s~~~~l~h 280 (477)
+++.+||+.+|++|||+.+++.+
T Consensus 232 ~li~~cl~~~p~~Rp~~~~ll~~ 254 (256)
T cd05113 232 AIMYSCWHEKAEERPTFQQLLSS 254 (256)
T ss_pred HHHHHHcCCCcccCCCHHHHHHh
Confidence 99999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds |
| >cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-41 Score=331.33 Aligned_cols=264 Identities=29% Similarity=0.466 Sum_probs=212.7
Q ss_pred ccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeC--
Q 042823 19 EDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDE-- 96 (477)
Q Consensus 19 ~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~-- 96 (477)
..+.++|.+.+.||+|+||.||+|.+..+++.+|+|++.+... .......+.+|+.++.++.+||||+++++++...
T Consensus 3 ~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~-~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~ 81 (337)
T cd07852 3 KHILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFR-NATDAQRTFREIMFLQELGDHPNIVKLLNVIKAEND 81 (337)
T ss_pred chhhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccC-cchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCC
Confidence 3577899999999999999999999998999999998864321 2233455678999999996799999999998643
Q ss_pred CeEEEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccc
Q 042823 97 TAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALL 176 (477)
Q Consensus 97 ~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~ 176 (477)
..+|+||||+.+ +|.+++... .+++..+..++.||+.||.|||++||+||||||+||++ +.++.+||+|||.+..
T Consensus 82 ~~~~lv~e~~~~-~L~~~~~~~-~~~~~~~~~i~~qi~~~L~~LH~~~i~H~dl~p~nill---~~~~~~kl~d~g~~~~ 156 (337)
T cd07852 82 KDIYLVFEYMET-DLHAVIRAN-ILEDVHKRYIMYQLLKALKYIHSGNVIHRDLKPSNILL---NSDCRVKLADFGLARS 156 (337)
T ss_pred ceEEEEeccccc-CHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE---cCCCcEEEeeccchhc
Confidence 468999999975 998888765 78888999999999999999999999999999999999 7788999999998876
Q ss_pred cCCCc------ceecccccccccchhhhhh--hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCC-------
Q 042823 177 FEEGQ------VYRDIVGSGFYIAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGE------- 241 (477)
Q Consensus 177 ~~~~~------~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~------- 241 (477)
..... ......||+.|+|||++.+ .++.++|||||||++|+|++|++||.+.........+....
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 236 (337)
T cd07852 157 LSELEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPSAED 236 (337)
T ss_pred cccccccccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHH
Confidence 53321 2234568999999998753 47889999999999999999999997765444333222111
Q ss_pred --------------------ccCCCCCCCCCCHHHHHHHHHhcccCccccCCHHHHhcCcccCcCCC
Q 042823 242 --------------------IDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGE 288 (477)
Q Consensus 242 --------------------~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~~~ 288 (477)
........+.++.++.++|.+||+.+|++|||+.++++|||++....
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~~~~~~~~~ 303 (337)
T cd07852 237 IESIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEHPYVAQFHN 303 (337)
T ss_pred HHHHHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhChhhhhhcc
Confidence 00011123457899999999999999999999999999999976543
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul |
| >cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-41 Score=314.54 Aligned_cols=245 Identities=36% Similarity=0.631 Sum_probs=212.6
Q ss_pred ccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEeccCCCc
Q 042823 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVVMELCEGGD 110 (477)
Q Consensus 31 iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~lv~e~~~gg~ 110 (477)
||+|+||.||+|.+..+++.+|+|++.+...........+.+|+.+++.+ +||||+++++.++.+...|+||||+++++
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~~v~e~~~~~~ 79 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRI-NHPFIVKLHYAFQTEEKLYLVLEYAPGGE 79 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHc-CCCcHHHHHHHeecCCeeEEEEecCCCCc
Confidence 79999999999999888999999998766544444566788999999999 69999999999999999999999999999
Q ss_pred hHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCCC-cceeccccc
Q 042823 111 LFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEG-QVYRDIVGS 189 (477)
Q Consensus 111 L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~-~~~~~~~gt 189 (477)
|.+++.....+++..+..++.|++.||.|||+.+++|+||+|+||++ +..+.++|+|||.+...... .......++
T Consensus 80 L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lh~~~~~H~~l~p~ni~~---~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~ 156 (250)
T cd05123 80 LFSHLSKEGRFSEERARFYAAEIVLALEYLHSLGIIYRDLKPENILL---DADGHIKLTDFGLAKELSSEGSRTNTFCGT 156 (250)
T ss_pred HHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcceEEE---cCCCcEEEeecCcceecccCCCcccCCcCC
Confidence 99999988889999999999999999999999999999999999999 66788999999988765443 223445788
Q ss_pred ccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCCCCHHHHHHHHHhcccCc
Q 042823 190 GFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKDP 268 (477)
Q Consensus 190 ~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp 268 (477)
..|+|||...+ .++.++|+||||+++|+|++|..||...........+......++ ...+..+.+++++||..||
T Consensus 157 ~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~~i~~~l~~~p 232 (250)
T cd05123 157 PEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDRKEIYEKILKDPLRFP----EFLSPEARDLISGLLQKDP 232 (250)
T ss_pred ccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCCC----CCCCHHHHHHHHHHhcCCH
Confidence 89999999865 478899999999999999999999987766666666665433322 3458999999999999999
Q ss_pred cccCCH---HHHhcCccc
Q 042823 269 KRRITA---AQVLEHPWL 283 (477)
Q Consensus 269 ~~R~s~---~~~l~h~~~ 283 (477)
++||++ .++++||||
T Consensus 233 ~~R~~~~~~~~l~~~~~f 250 (250)
T cd05123 233 TKRLGSGGAEEIKAHPFF 250 (250)
T ss_pred hhCCCcccHHHHHhCCCC
Confidence 999999 999999997
|
Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the |
| >cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-41 Score=321.39 Aligned_cols=252 Identities=20% Similarity=0.236 Sum_probs=206.8
Q ss_pred cccccccccccccCCeEEEEEEEccCC----------------ceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCC
Q 042823 22 MLHYFFGRMLGRGQFGVSYLCTENSTN----------------RPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPN 85 (477)
Q Consensus 22 ~~~Y~~~~~iG~G~~g~V~~~~~~~~~----------------~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpn 85 (477)
.++|++++.||+|+||.||+|.+..++ ..||+|.+..... ......+.+|++++..+ +|||
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~--~~~~~~~~~e~~~l~~l-~~~~ 80 (296)
T cd05051 4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDAS--DNAREDFLKEVKILSRL-SDPN 80 (296)
T ss_pred hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccC--HHHHHHHHHHHHHHHhc-CCCC
Confidence 468999999999999999999876544 4579998865432 23456788999999999 7999
Q ss_pred eeEEEEEEEeCCeEEEEEeccCCCchHHHHHHcC-----------CCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCc
Q 042823 86 VVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKG-----------YNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPEN 154 (477)
Q Consensus 86 iv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~-----------~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~N 154 (477)
|+++++++..+...++||||+++++|.+++.... .+++..+..++.|++.||.|||++|++||||||+|
T Consensus 81 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~i~H~dlkp~N 160 (296)
T cd05051 81 IARLLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLNFVHRDLATRN 160 (296)
T ss_pred EeEEEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcCccccccchhc
Confidence 9999999999999999999999999999998765 68999999999999999999999999999999999
Q ss_pred eeeeecCCCCCEEEeecCCccccCCCcc---eecccccccccchhhhhh-hcCCccchHhHHHHHHHHhh--CCCCCCCC
Q 042823 155 FSFISRDDNALLKVTDFGSALLFEEGQV---YRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLS--GVPPFWAE 228 (477)
Q Consensus 155 il~~~~~~~~~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~t--g~~pf~~~ 228 (477)
|++ +..+.++|+|||.+........ .....+++.|+|||++.+ .++.++|||||||++|+|++ |..||...
T Consensus 161 ili---~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~ 237 (296)
T cd05051 161 CLV---GKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHL 237 (296)
T ss_pred eee---cCCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCCc
Confidence 999 6778999999999875433221 123356778999999865 68999999999999999998 78888776
Q ss_pred ChhhHHHHHHcC----CccCCCCCCCCCCHHHHHHHHHhcccCccccCCHHHHhc
Q 042823 229 TKKGTYDAILQG----EIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLE 279 (477)
Q Consensus 229 ~~~~~~~~i~~~----~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~ 279 (477)
+....+..+... .........+.+|.++.+++.+||+.||++|||+.++++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~ 292 (296)
T cd05051 238 TDQQVIENAGHFFRDDGRQIYLPRPPNCPKDIYELMLECWRRDEEDRPTFREIHL 292 (296)
T ss_pred ChHHHHHHHHhccccccccccCCCccCCCHHHHHHHHHHhccChhcCCCHHHHHH
Confidence 666665555432 111111122356899999999999999999999999964
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke |
| >cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-41 Score=314.24 Aligned_cols=242 Identities=26% Similarity=0.361 Sum_probs=199.7
Q ss_pred ccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEeccCC
Q 042823 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVVMELCEG 108 (477)
Q Consensus 29 ~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~lv~e~~~g 108 (477)
+.||+|+||.||+|.++.+++.+|+|.+.... .......+.+|+.+++.+ +||||+++++++.....+|+||||+++
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~ 77 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETL--PPDLKAKFLQEARILKQY-SHPNIVRLIGVCTQKQPIYIVMELVQG 77 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccC--CHHHHHHHHHHHHHHHhC-CCCCcceEEEEEcCCCCeEEEEeeccC
Confidence 46999999999999999999999999875432 233456788999999999 799999999999999999999999999
Q ss_pred CchHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCCCccee---
Q 042823 109 GDLFDRIIAKG-YNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYR--- 184 (477)
Q Consensus 109 g~L~~~l~~~~-~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~--- 184 (477)
++|.+++...+ .+++..+..++.|++.||.|||++|++||||||+||++ +.++.+||+|||++..........
T Consensus 78 ~~L~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~---~~~~~~kl~dfg~~~~~~~~~~~~~~~ 154 (252)
T cd05084 78 GDFLTFLRTEGPRLKVKELIQMVENAAAGMEYLESKHCIHRDLAARNCLV---TEKNVLKISDFGMSREEEDGVYASTGG 154 (252)
T ss_pred CcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEE---cCCCcEEECccccCcccccccccccCC
Confidence 99999987644 58999999999999999999999999999999999999 677889999999987543321110
Q ss_pred cccccccccchhhhhh-hcCCccchHhHHHHHHHHhh-CCCCCCCCChhhHHHHHHcCCccCCCCCCCCCCHHHHHHHHH
Q 042823 185 DIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRR 262 (477)
Q Consensus 185 ~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~t-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~ 262 (477)
...++..|+|||.+.+ .++.++|||||||++|+|++ |.+||...........+...... .....++..+.+++.+
T Consensus 155 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~li~~ 231 (252)
T cd05084 155 MKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQTREAIEQGVRL---PCPELCPDAVYRLMER 231 (252)
T ss_pred CCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHHHHHHHHHcCCCC---CCcccCCHHHHHHHHH
Confidence 1122456999999864 58899999999999999998 99999776665555555443221 1224578999999999
Q ss_pred hcccCccccCCHHHHhc
Q 042823 263 MLTKDPKRRITAAQVLE 279 (477)
Q Consensus 263 ~l~~dp~~R~s~~~~l~ 279 (477)
||+.+|++|||+.++++
T Consensus 232 ~l~~~p~~Rps~~~~~~ 248 (252)
T cd05084 232 CWEYDPGQRPSFSTVHQ 248 (252)
T ss_pred HcCCChhhCcCHHHHHH
Confidence 99999999999999874
|
Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular |
| >cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-41 Score=321.03 Aligned_cols=260 Identities=28% Similarity=0.489 Sum_probs=214.4
Q ss_pred ccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEE
Q 042823 21 VMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVH 100 (477)
Q Consensus 21 ~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~ 100 (477)
....|....+||+|+||.||++.++.+++.||+|.+.... ......+.+|+.+++.+ +||||+++++.+...+..|
T Consensus 18 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~---~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~ 93 (292)
T cd06657 18 PRTYLDNFIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRK---QQRRELLFNEVVIMRDY-QHENVVEMYNSYLVGDELW 93 (292)
T ss_pred hHHHhhhHHHcCCCCCeEEEEEEEcCCCeEEEEEEecccc---hhHHHHHHHHHHHHHhc-CCcchhheeeEEEeCCEEE
Confidence 3344555678999999999999999999999999875322 23456688899999988 7999999999999999999
Q ss_pred EEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCCC
Q 042823 101 VVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEG 180 (477)
Q Consensus 101 lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~ 180 (477)
+||||+++++|.+++. .+.+++..+..++.|++.||.|||+.|++||||+|+||++ +.++.++|+|||.+......
T Consensus 94 lv~e~~~~~~L~~~~~-~~~~~~~~~~~~~~ql~~~l~~lH~~givH~dl~p~Nilv---~~~~~~~l~dfg~~~~~~~~ 169 (292)
T cd06657 94 VVMEFLEGGALTDIVT-HTRMNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDSILL---THDGRVKLSDFGFCAQVSKE 169 (292)
T ss_pred EEEecCCCCcHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE---CCCCCEEEcccccceecccc
Confidence 9999999999988764 4568999999999999999999999999999999999999 67788999999987654322
Q ss_pred c-ceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCCCCHHHHH
Q 042823 181 Q-VYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKD 258 (477)
Q Consensus 181 ~-~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 258 (477)
. ......|++.|+|||.+.+ .++.++|+||+|+++|+|++|.+||.+.........+...... .......+++.+.+
T Consensus 170 ~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~ 248 (292)
T cd06657 170 VPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPP-KLKNLHKVSPSLKG 248 (292)
T ss_pred cccccccccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhCCc-ccCCcccCCHHHHH
Confidence 1 2233568899999998864 5788999999999999999999999876655555444332221 11123457899999
Q ss_pred HHHHhcccCccccCCHHHHhcCcccCcCCCC
Q 042823 259 LVRRMLTKDPKRRITAAQVLEHPWLRESGEA 289 (477)
Q Consensus 259 li~~~l~~dp~~R~s~~~~l~h~~~~~~~~~ 289 (477)
++.+||..+|.+||++.++++||||.....+
T Consensus 249 li~~~l~~~P~~R~~~~~ll~~~~~~~~~~~ 279 (292)
T cd06657 249 FLDRLLVRDPAQRATAAELLKHPFLAKAGPP 279 (292)
T ss_pred HHHHHHhCCcccCcCHHHHhcChHHhccCCC
Confidence 9999999999999999999999999877643
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo |
| >cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-41 Score=314.85 Aligned_cols=243 Identities=23% Similarity=0.352 Sum_probs=208.7
Q ss_pred ccccccCCeEEEEEEEccC---CceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEec
Q 042823 29 RMLGRGQFGVSYLCTENST---NRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVVMEL 105 (477)
Q Consensus 29 ~~iG~G~~g~V~~~~~~~~---~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~lv~e~ 105 (477)
+.||+|+||.||+|.+... +..||+|.+...... .....+.+|+..+..+ +||||+++++++.....+++||||
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~~~~~~lv~e~ 77 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASE--EERKDFLKEARVMKKL-GHPNVVRLLGVCTEEEPLYLVLEY 77 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccch--hHHHHHHHHHHHHhhc-CCCChheeeeeecCCCceEEEEEe
Confidence 4799999999999999865 899999998654322 2467788999999999 599999999999999999999999
Q ss_pred cCCCchHHHHHHc---------CCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccc
Q 042823 106 CEGGDLFDRIIAK---------GYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALL 176 (477)
Q Consensus 106 ~~gg~L~~~l~~~---------~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~ 176 (477)
+++++|.+++... ..+++..+..++.|++.||.|||++|++||||+|+||++ +.++.+||+|||.+..
T Consensus 78 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~nili---~~~~~~~l~dfg~~~~ 154 (262)
T cd00192 78 MEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKKFVHRDLAARNCLV---GEDLVVKISDFGLSRD 154 (262)
T ss_pred ccCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCCcccCccCcceEEE---CCCCcEEEcccccccc
Confidence 9999999999885 778999999999999999999999999999999999999 6778999999999987
Q ss_pred cCCCc---ceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhh-CCCCCCCCChhhHHHHHHcCCccCCCCCCCC
Q 042823 177 FEEGQ---VYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQGEIDFDTDPWPS 251 (477)
Q Consensus 177 ~~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~t-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 251 (477)
..... ......+++.|+|||.+.. .++.++|||||||++|+|++ |..||...........+..+... ...+.
T Consensus 155 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~---~~~~~ 231 (262)
T cd00192 155 VYDDDYYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNEEVLEYLRKGYRL---PKPEY 231 (262)
T ss_pred cccccccccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCC---CCCcc
Confidence 65432 1234567889999999864 68899999999999999999 69999888777777777664321 12245
Q ss_pred CCHHHHHHHHHhcccCccccCCHHHHhcC
Q 042823 252 ISSTAKDLVRRMLTKDPKRRITAAQVLEH 280 (477)
Q Consensus 252 ~~~~~~~li~~~l~~dp~~R~s~~~~l~h 280 (477)
+|+++.+++.+||..+|++|||+.+++++
T Consensus 232 ~~~~~~~li~~~l~~~p~~Rps~~~l~~~ 260 (262)
T cd00192 232 CPDELYELMLSCWQLDPEDRPTFSELVER 260 (262)
T ss_pred CChHHHHHHHHHccCCcccCcCHHHHHHh
Confidence 78999999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan |
| >cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-41 Score=327.93 Aligned_cols=259 Identities=28% Similarity=0.412 Sum_probs=208.4
Q ss_pred cccccccccccCCeEEEEEEEccC--CceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEe----CC
Q 042823 24 HYFFGRMLGRGQFGVSYLCTENST--NRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYED----ET 97 (477)
Q Consensus 24 ~Y~~~~~iG~G~~g~V~~~~~~~~--~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~----~~ 97 (477)
+|.+.+.||+|+||.||+|.+..+ +..||+|++..... .......+.+|+.++.++.+||||+++++.+.. ..
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~ 79 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFS-KKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFN 79 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccc-cchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCC
Confidence 588999999999999999999888 89999999864322 122345677899999999779999999987542 24
Q ss_pred eEEEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCcccc
Q 042823 98 AVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLF 177 (477)
Q Consensus 98 ~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~ 177 (477)
.+|+++||+. ++|.+++.....+++..++.++.||+.||.|||++|++||||||+||++ +..+.+||+|||.+...
T Consensus 80 ~~~~~~e~~~-~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givH~dlkp~Nili---~~~~~~kl~Dfg~a~~~ 155 (332)
T cd07857 80 ELYLYEELME-ADLHQIIRSGQPLTDAHFQSFIYQILCGLKYIHSANVLHRDLKPGNLLV---NADCELKICDFGLARGF 155 (332)
T ss_pred cEEEEEeccc-CCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHeEE---cCCCCEEeCcCCCceec
Confidence 6889999996 5999999888889999999999999999999999999999999999999 67788999999998765
Q ss_pred CCCc-----ceecccccccccchhhhhh--hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCC---------
Q 042823 178 EEGQ-----VYRDIVGSGFYIAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGE--------- 241 (477)
Q Consensus 178 ~~~~-----~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~--------- 241 (477)
.... ......||+.|+|||++.+ .++.++||||+||++|+|++|.+||...........+....
T Consensus 156 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (332)
T cd07857 156 SENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPDEETLS 235 (332)
T ss_pred ccccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhCCCCHHHHH
Confidence 4321 1233578999999998754 57899999999999999999999997765433333222110
Q ss_pred --------------ccCC----CCCCCCCCHHHHHHHHHhcccCccccCCHHHHhcCcccCcCC
Q 042823 242 --------------IDFD----TDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESG 287 (477)
Q Consensus 242 --------------~~~~----~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~~ 287 (477)
...+ ...++.++..+.+|+.+||+.||++|||+.+++.|||++.-.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~~~~~~~~~ 299 (332)
T cd07857 236 RIGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALEHPYLAIWH 299 (332)
T ss_pred hhhhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhcChhhhhhc
Confidence 0000 112345788999999999999999999999999999997543
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co |
| >KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-41 Score=348.86 Aligned_cols=256 Identities=30% Similarity=0.490 Sum_probs=208.4
Q ss_pred ccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEe-----
Q 042823 21 VMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYED----- 95 (477)
Q Consensus 21 ~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~----- 95 (477)
...+|...+.||+||||.||+|+++-.|+.||||+|.... .......+.+|+..+.+| +|||||++|..|.+
T Consensus 477 Y~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~--s~~~~skI~rEVk~LArL-nHpNVVRYysAWVEs~~~~ 553 (1351)
T KOG1035|consen 477 YLNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKA--SDKLYSKILREVKLLARL-NHPNVVRYYSAWVESTAEL 553 (1351)
T ss_pred HhhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCch--HHHHHHHHHHHHHHHhhc-CCcceeeeehhhhccCCcc
Confidence 4445677899999999999999999999999999998665 344567789999999999 89999999744310
Q ss_pred --------------------------------------------------------------------------------
Q 042823 96 -------------------------------------------------------------------------------- 95 (477)
Q Consensus 96 -------------------------------------------------------------------------------- 95 (477)
T Consensus 554 ~~~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~t 633 (1351)
T KOG1035|consen 554 TVLEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNT 633 (1351)
T ss_pred ccccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCcccccccccccccccc
Confidence
Q ss_pred --------------------------C--------CeEEEEEeccCCCchHHHHHHcCCC-CHHHHHHHHHHHHHHHHHH
Q 042823 96 --------------------------E--------TAVHVVMELCEGGDLFDRIIAKGYN-SERDAATVLRAIVNAVNVC 140 (477)
Q Consensus 96 --------------------------~--------~~~~lv~e~~~gg~L~~~l~~~~~~-~~~~~~~i~~qil~~L~~l 140 (477)
+ ..+||-||||+..+|.+++..+... ....++.++++|++||.|+
T Consensus 634 S~~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~~~d~~wrLFreIlEGLaYI 713 (1351)
T KOG1035|consen 634 SDSEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNSQRDEAWRLFREILEGLAYI 713 (1351)
T ss_pred cccCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccchhhHHHHHHHHHHHHHHHHH
Confidence 0 2479999999997777777666554 4778999999999999999
Q ss_pred HHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccC-------------------CCcceecccccccccchhhhhh-
Q 042823 141 HSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFE-------------------EGQVYRDIVGSGFYIAPEVLRR- 200 (477)
Q Consensus 141 H~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~-------------------~~~~~~~~~gt~~y~aPE~~~~- 200 (477)
|+.|||||||||.||++ ++...|||+|||+|+... +.....+.+||..|+|||++.+
T Consensus 714 H~~giIHRDLKP~NIFL---d~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~ 790 (1351)
T KOG1035|consen 714 HDQGIIHRDLKPRNIFL---DSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDT 790 (1351)
T ss_pred HhCceeeccCCcceeEE---cCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhccc
Confidence 99999999999999999 788899999999998621 0112355789999999999853
Q ss_pred ---hcCCccchHhHHHHHHHHhhCCCCCCCC-ChhhHHHHHHcCCccCCCCCCCCCCHHHHHHHHHhcccCccccCCHHH
Q 042823 201 ---RYGKEIDIWSAGVILYILLSGVPPFWAE-TKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQ 276 (477)
Q Consensus 201 ---~~~~~~DiwslG~il~~l~tg~~pf~~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~ 276 (477)
.|+.|+||||||+|++||+. ||... .....+.++..+..+.+...+.+--+.-..+|++||+.||.+||||.|
T Consensus 791 ~~~~Yn~KiDmYSLGIVlFEM~y---PF~TsMERa~iL~~LR~g~iP~~~~f~~~~~~~e~slI~~Ll~hdP~kRPtA~e 867 (1351)
T KOG1035|consen 791 SSNKYNSKIDMYSLGIVLFEMLY---PFGTSMERASILTNLRKGSIPEPADFFDPEHPEEASLIRWLLSHDPSKRPTATE 867 (1351)
T ss_pred ccccccchhhhHHHHHHHHHHhc---cCCchHHHHHHHHhcccCCCCCCcccccccchHHHHHHHHHhcCCCccCCCHHH
Confidence 59999999999999999994 57543 334456667777776664444445566788999999999999999999
Q ss_pred HhcCcccCc
Q 042823 277 VLEHPWLRE 285 (477)
Q Consensus 277 ~l~h~~~~~ 285 (477)
+|++.|+-.
T Consensus 868 LL~s~llpp 876 (1351)
T KOG1035|consen 868 LLNSELLPP 876 (1351)
T ss_pred HhhccCCCc
Confidence 999999964
|
|
| >cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-41 Score=317.85 Aligned_cols=252 Identities=20% Similarity=0.248 Sum_probs=208.3
Q ss_pred ccccccccccccccccCCeEEEEEEEccCC-----ceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEE
Q 042823 19 EDVMLHYFFGRMLGRGQFGVSYLCTENSTN-----RPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTY 93 (477)
Q Consensus 19 ~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~-----~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~ 93 (477)
+...++|++.+.||+|+||.||+|.++..+ ..||+|.+.... .......+.+|+.++..+ +||||+++++++
T Consensus 2 ~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~--~~~~~~~~~~e~~~l~~~-~~~~i~~~~~~~ 78 (277)
T cd05032 2 ELPREKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENA--SMRERIEFLNEASVMKEF-NCHHVVRLLGVV 78 (277)
T ss_pred ccchHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCcc--CHHHHHHHHHHHHHHHhC-CCCceeEEEEEE
Confidence 345678999999999999999999886443 789999975432 223345677899999998 799999999999
Q ss_pred EeCCeEEEEEeccCCCchHHHHHHcC----------CCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCC
Q 042823 94 EDETAVHVVMELCEGGDLFDRIIAKG----------YNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDN 163 (477)
Q Consensus 94 ~~~~~~~lv~e~~~gg~L~~~l~~~~----------~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~ 163 (477)
......|+||||+++|+|.+++.... .+++..+..++.|++.||.|||+++++||||||+||++ +.+
T Consensus 79 ~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~di~p~nill---~~~ 155 (277)
T cd05032 79 STGQPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKKFVHRDLAARNCMV---AED 155 (277)
T ss_pred cCCCCcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccChheEEE---cCC
Confidence 99999999999999999999987532 35778899999999999999999999999999999999 778
Q ss_pred CCEEEeecCCccccCCCcc---eecccccccccchhhhh-hhcCCccchHhHHHHHHHHhh-CCCCCCCCChhhHHHHHH
Q 042823 164 ALLKVTDFGSALLFEEGQV---YRDIVGSGFYIAPEVLR-RRYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAIL 238 (477)
Q Consensus 164 ~~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~l~t-g~~pf~~~~~~~~~~~i~ 238 (477)
+.+||+|||++........ .....++..|+|||.+. +.++.++|||||||++|+|+| |.+||...+.......+.
T Consensus 156 ~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~ 235 (277)
T cd05032 156 LTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNEEVLKFVI 235 (277)
T ss_pred CCEEECCcccchhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCHHHHHHHHh
Confidence 8999999999876533221 12335678899999986 468899999999999999998 999998877777766666
Q ss_pred cCCccCCCCCCCCCCHHHHHHHHHhcccCccccCCHHHHhc
Q 042823 239 QGEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLE 279 (477)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~ 279 (477)
.+.... ....++..+.+++.+||+.+|++|||+.++++
T Consensus 236 ~~~~~~---~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~ 273 (277)
T cd05032 236 DGGHLD---LPENCPDKLLELMRMCWQYNPKMRPTFLEIVS 273 (277)
T ss_pred cCCCCC---CCCCCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 433211 12346899999999999999999999999975
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological |
| >KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.7e-43 Score=322.75 Aligned_cols=265 Identities=28% Similarity=0.474 Sum_probs=221.3
Q ss_pred ccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchh----hHHHHHHHHHHHHhccCCCCeeEEEEEEE
Q 042823 19 EDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLA----ENDMIRREIQIRLYLSGQPNVVEFKSTYE 94 (477)
Q Consensus 19 ~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~----~~~~~~~e~~~~~~l~~hpniv~~~~~~~ 94 (477)
-.+.++|-+...||+|||+.||+|.+...++.||||+-..+...... .....-+|.+|.+.| +||.||++|++|.
T Consensus 459 ptLn~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeL-DHpRIVKlYDyfs 537 (775)
T KOG1151|consen 459 PTLNDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKEL-DHPRIVKLYDYFS 537 (775)
T ss_pred cchHHHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhcc-Ccceeeeeeeeee
Confidence 46788999999999999999999999999999999986544332222 223445789999999 8999999999996
Q ss_pred -eCCeEEEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHc--CCeeccCCCCceeeeecCCCCCEEEeec
Q 042823 95 -DETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSM--GVMHRDLKPENFSFISRDDNALLKVTDF 171 (477)
Q Consensus 95 -~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~--~ivH~dlkp~Nil~~~~~~~~~~kl~Df 171 (477)
+...+|-|+|||+|.+|--||+.+..++|.+++.|+.||+.||.||... .|||-||||.|||+..-+..|.+||+||
T Consensus 538 lDtdsFCTVLEYceGNDLDFYLKQhklmSEKEARSIiMQiVnAL~YLNEikpPIIHYDLKPgNILLv~GtacGeIKITDF 617 (775)
T KOG1151|consen 538 LDTDSFCTVLEYCEGNDLDFYLKQHKLMSEKEARSIIMQIVNALKYLNEIKPPIIHYDLKPGNILLVNGTACGEIKITDF 617 (775)
T ss_pred eccccceeeeeecCCCchhHHHHhhhhhhHHHHHHHHHHHHHHHHHHhccCCCeeeeccCCccEEEecCcccceeEeeec
Confidence 5667999999999999999999999999999999999999999999976 4999999999999988778889999999
Q ss_pred CCccccCCCc--------ceecccccccccchhhhh-h----hcCCccchHhHHHHHHHHhhCCCCCCCCChhh-HHH--
Q 042823 172 GSALLFEEGQ--------VYRDIVGSGFYIAPEVLR-R----RYGKEIDIWSAGVILYILLSGVPPFWAETKKG-TYD-- 235 (477)
Q Consensus 172 g~a~~~~~~~--------~~~~~~gt~~y~aPE~~~-~----~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~-~~~-- 235 (477)
|+++...... ......||.||++||++- + +.+.++||||+|||+|+++.|+.||....... +++
T Consensus 618 GLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQQdILqeN 697 (775)
T KOG1151|consen 618 GLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQDILQEN 697 (775)
T ss_pred chhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhHHHHHhhh
Confidence 9999875432 223468999999999874 2 47889999999999999999999997654332 221
Q ss_pred HHH-cCCccCCCCCCCCCCHHHHHHHHHhcccCccccCCHHHHhcCcccCcC
Q 042823 236 AIL-QGEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRES 286 (477)
Q Consensus 236 ~i~-~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~ 286 (477)
.|+ ..+..|++. |.+|+++++||++||++.-+.|..+.++-.||+|...
T Consensus 698 TIlkAtEVqFP~K--PvVsseAkaFIRRCLaYRKeDR~DV~qLA~dpyllPh 747 (775)
T KOG1151|consen 698 TILKATEVQFPPK--PVVSSEAKAFIRRCLAYRKEDRIDVQQLACDPYLLPH 747 (775)
T ss_pred chhcceeccCCCC--CccCHHHHHHHHHHHHhhhhhhhhHHHHccCccccch
Confidence 222 233455543 6799999999999999999999999999999999764
|
|
| >cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-41 Score=321.55 Aligned_cols=254 Identities=22% Similarity=0.323 Sum_probs=207.3
Q ss_pred ccccccccccccccccCCeEEEEEEE-----ccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEE
Q 042823 19 EDVMLHYFFGRMLGRGQFGVSYLCTE-----NSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTY 93 (477)
Q Consensus 19 ~~~~~~Y~~~~~iG~G~~g~V~~~~~-----~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~ 93 (477)
.-..++|.+.+.||+|+||.||+|.+ ..++..+|+|.+..... ......+.+|+.++.++.+||||+++++++
T Consensus 31 ~~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~ 108 (302)
T cd05055 31 EFPRNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAH--SSEREALMSELKIMSHLGNHENIVNLLGAC 108 (302)
T ss_pred cccHHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCC--hHHHHHHHHHHHHHHhccCCCCcceEEEEE
Confidence 44556899999999999999999975 33456899998865432 234567889999999997799999999999
Q ss_pred EeCCeEEEEEeccCCCchHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeec
Q 042823 94 EDETAVHVVMELCEGGDLFDRIIAKG--YNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDF 171 (477)
Q Consensus 94 ~~~~~~~lv~e~~~gg~L~~~l~~~~--~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Df 171 (477)
...+..|+||||+++|+|.+++.... .+++.++..++.|++.||.|||+++++|+||||+||++ +..+.+||+||
T Consensus 109 ~~~~~~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~---~~~~~~~l~df 185 (302)
T cd05055 109 TIGGPILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNVLL---THGKIVKICDF 185 (302)
T ss_pred ecCCceEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeehhhhccceEEE---cCCCeEEECCC
Confidence 99999999999999999999997643 37999999999999999999999999999999999999 67788999999
Q ss_pred CCccccCCCcc---eecccccccccchhhhhh-hcCCccchHhHHHHHHHHhh-CCCCCCCCChhhHHHHHHcCCccCCC
Q 042823 172 GSALLFEEGQV---YRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQGEIDFDT 246 (477)
Q Consensus 172 g~a~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~t-g~~pf~~~~~~~~~~~i~~~~~~~~~ 246 (477)
|++........ .....+++.|+|||.+.+ .++.++||||+||++|+|++ |.+||....................
T Consensus 186 g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~- 264 (302)
T cd05055 186 GLARDIMNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDSKFYKLIKEGYRMA- 264 (302)
T ss_pred cccccccCCCceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchHHHHHHHHcCCcCC-
Confidence 99876543221 112345778999998864 58899999999999999998 9999987665544444433322221
Q ss_pred CCCCCCCHHHHHHHHHhcccCccccCCHHHHhc
Q 042823 247 DPWPSISSTAKDLVRRMLTKDPKRRITAAQVLE 279 (477)
Q Consensus 247 ~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~ 279 (477)
.....++.+.+++.+||..+|++|||+.++++
T Consensus 265 -~~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~ 296 (302)
T cd05055 265 -QPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQ 296 (302)
T ss_pred -CCCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence 22357899999999999999999999999975
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept |
| >cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-41 Score=314.38 Aligned_cols=251 Identities=27% Similarity=0.459 Sum_probs=215.3
Q ss_pred cccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEE
Q 042823 24 HYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVVM 103 (477)
Q Consensus 24 ~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~lv~ 103 (477)
+|++.+.||+|+||.||+|.++.+++.+|+|.+..... .......+.+|+.+++.+ +||||+++++++......|+||
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~~v~ 78 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSM-SQKEREDAVNEIRILASV-NHPNIISYKEAFLDGNKLCIVM 78 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhc-cHHHHHHHHHHHHHHHhC-CCCCchhhhhhhccCCEEEEEe
Confidence 58899999999999999999999999999999865432 233456677899999999 6999999999999999999999
Q ss_pred eccCCCchHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCC
Q 042823 104 ELCEGGDLFDRIIA----KGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEE 179 (477)
Q Consensus 104 e~~~gg~L~~~l~~----~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~ 179 (477)
||+++++|.+++.+ ...+++..+..++.|++.||.|||+.|++||||+|+||++ +..+.+||+|||++.....
T Consensus 79 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~i~h~~l~~~ni~~---~~~~~~kl~d~g~~~~~~~ 155 (256)
T cd08530 79 EYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQKILHRDLKSANILL---VANDLVKIGDLGISKVLKK 155 (256)
T ss_pred hhcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEE---ecCCcEEEeeccchhhhcc
Confidence 99999999998876 3568999999999999999999999999999999999999 5577899999999877654
Q ss_pred Ccceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCCCCHHHHH
Q 042823 180 GQVYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKD 258 (477)
Q Consensus 180 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 258 (477)
. ......+++.|+|||.+.+ .++.++|+||+|+++|+|++|+.||...+.......+..+...... ..++.++++
T Consensus 156 ~-~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 231 (256)
T cd08530 156 N-MAKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQDLRYKVQRGKYPPIP---PIYSQDLQN 231 (256)
T ss_pred C-CcccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCCc---hhhCHHHHH
Confidence 4 3334568899999999865 4788999999999999999999999887766666666554432221 367899999
Q ss_pred HHHHhcccCccccCCHHHHhcCccc
Q 042823 259 LVRRMLTKDPKRRITAAQVLEHPWL 283 (477)
Q Consensus 259 li~~~l~~dp~~R~s~~~~l~h~~~ 283 (477)
++.+||+.+|++|||+.++++||++
T Consensus 232 li~~~l~~~p~~Rp~~~~~l~~p~~ 256 (256)
T cd08530 232 FIRSMLQVKPKLRPNCDKILASPAV 256 (256)
T ss_pred HHHHHcCCCcccCCCHHHHhcCCCC
Confidence 9999999999999999999999974
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an |
| >cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-41 Score=322.22 Aligned_cols=257 Identities=27% Similarity=0.507 Sum_probs=209.9
Q ss_pred cccccccccccCCeEEEEEEEc---cCCceEEEEEeecCCcc-chhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeE
Q 042823 24 HYFFGRMLGRGQFGVSYLCTEN---STNRPYACKSIAKKPKM-RLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAV 99 (477)
Q Consensus 24 ~Y~~~~~iG~G~~g~V~~~~~~---~~~~~~aiK~~~~~~~~-~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~ 99 (477)
.|++.+.||+|++|.||+|.+. .++..||+|++.+.... .......+.+|+.++.++.+||||+++++.+..+..+
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~ 80 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKL 80 (288)
T ss_pred CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEE
Confidence 4888999999999999999864 46788999998754321 1233456788999999998899999999999999999
Q ss_pred EEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCC
Q 042823 100 HVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEE 179 (477)
Q Consensus 100 ~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~ 179 (477)
|+||||++||+|.+++.....+++..+..++.|++.||.|||+.|++||||+|.||++ +.++.++|+|||++.....
T Consensus 81 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~~~H~dl~p~nil~---~~~~~~~l~dfg~~~~~~~ 157 (288)
T cd05583 81 HLILDYVNGGELFTHLYQREHFTESEVRVYIAEIVLALDHLHQLGIIYRDIKLENILL---DSEGHVVLTDFGLSKEFLA 157 (288)
T ss_pred EEEEecCCCCcHHHHHhhcCCcCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEE---CCCCCEEEEECcccccccc
Confidence 9999999999999999888889999999999999999999999999999999999999 6778899999999876543
Q ss_pred Ccc--eecccccccccchhhhhhh---cCCccchHhHHHHHHHHhhCCCCCCCCChh----hHHHHHHcCCccCCCCCCC
Q 042823 180 GQV--YRDIVGSGFYIAPEVLRRR---YGKEIDIWSAGVILYILLSGVPPFWAETKK----GTYDAILQGEIDFDTDPWP 250 (477)
Q Consensus 180 ~~~--~~~~~gt~~y~aPE~~~~~---~~~~~DiwslG~il~~l~tg~~pf~~~~~~----~~~~~i~~~~~~~~~~~~~ 250 (477)
... .....|++.|+|||.+.+. ++.++||||+|+++|+|++|..||...... .....+.... .+...
T Consensus 158 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~----~~~~~ 233 (288)
T cd05583 158 EEEERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNSQSEISRRILKSK----PPFPK 233 (288)
T ss_pred ccccccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccchHHHHHHHHHccC----CCCCc
Confidence 322 1234688999999998643 678999999999999999999999643222 2222222222 12224
Q ss_pred CCCHHHHHHHHHhcccCccccCC---HHHHhcCcccCcCC
Q 042823 251 SISSTAKDLVRRMLTKDPKRRIT---AAQVLEHPWLRESG 287 (477)
Q Consensus 251 ~~~~~~~~li~~~l~~dp~~R~s---~~~~l~h~~~~~~~ 287 (477)
.++..+.+++.+||+.+|++||| +.++|+||||+...
T Consensus 234 ~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~~~~~~~~ 273 (288)
T cd05583 234 TMSAEARDFIQKLLEKDPKKRLGANGADEIKNHPFFQGID 273 (288)
T ss_pred ccCHHHHHHHHHHhcCCHhhccCcchHHHHhcCcccccCC
Confidence 57899999999999999999998 56779999997653
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines |
| >cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.6e-41 Score=314.20 Aligned_cols=248 Identities=19% Similarity=0.276 Sum_probs=207.4
Q ss_pred cccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeE
Q 042823 20 DVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAV 99 (477)
Q Consensus 20 ~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~ 99 (477)
.-.++|++.++||+|+||.||+|.+. .+..||+|.+.... .....+.+|+.++..+ +||||+++++++......
T Consensus 3 ~~~~~~~~~~~lg~g~~g~v~~~~~~-~~~~v~iK~~~~~~----~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~ 76 (261)
T cd05072 3 IPRESIKLVKKLGAGQFGEVWMGYYN-NSTKVAVKTLKPGT----MSVQAFLEEANLMKTL-QHDKLVRLYAVVTKEEPI 76 (261)
T ss_pred CchHHeEEeeecCCcCCceEEEEEec-CCceEEEEEccCCc----hhHHHHHHHHHHHHhC-CCCCeeeEEEEEcCCCCc
Confidence 34568999999999999999999865 56779999875432 2346788899999999 799999999999999999
Q ss_pred EEEEeccCCCchHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCcccc
Q 042823 100 HVVMELCEGGDLFDRIIAK--GYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLF 177 (477)
Q Consensus 100 ~lv~e~~~gg~L~~~l~~~--~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~ 177 (477)
|+||||+++|+|.+++... ..++...+..++.|++.||.|||+.+++||||||+||++ +..+.+||+|||.+...
T Consensus 77 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nili---~~~~~~~l~dfg~~~~~ 153 (261)
T cd05072 77 YIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLV---SESLMCKIADFGLARVI 153 (261)
T ss_pred EEEEecCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEe---cCCCcEEECCCccceec
Confidence 9999999999999998763 457888999999999999999999999999999999999 67788999999999866
Q ss_pred CCCcc--eecccccccccchhhhh-hhcCCccchHhHHHHHHHHhh-CCCCCCCCChhhHHHHHHcCCccCCCCCCCCCC
Q 042823 178 EEGQV--YRDIVGSGFYIAPEVLR-RRYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQGEIDFDTDPWPSIS 253 (477)
Q Consensus 178 ~~~~~--~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~l~t-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 253 (477)
..... .....++..|+|||.+. +.++.++|||||||++|+|+| |..||...........+..+. . .+....++
T Consensus 154 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~-~--~~~~~~~~ 230 (261)
T cd05072 154 EDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSDVMSALQRGY-R--MPRMENCP 230 (261)
T ss_pred CCCceeccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHHHHHHHHHcCC-C--CCCCCCCC
Confidence 43321 12234566799999986 457889999999999999998 999998877777666665542 2 22234688
Q ss_pred HHHHHHHHHhcccCccccCCHHHHhc
Q 042823 254 STAKDLVRRMLTKDPKRRITAAQVLE 279 (477)
Q Consensus 254 ~~~~~li~~~l~~dp~~R~s~~~~l~ 279 (477)
.++.+++.+||..+|++|||++++++
T Consensus 231 ~~~~~li~~~l~~~p~~Rp~~~~i~~ 256 (261)
T cd05072 231 DELYDIMKTCWKEKAEERPTFDYLQS 256 (261)
T ss_pred HHHHHHHHHHccCCcccCcCHHHHHH
Confidence 99999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa |
| >cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-41 Score=321.72 Aligned_cols=253 Identities=32% Similarity=0.485 Sum_probs=208.5
Q ss_pred ccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEe
Q 042823 25 YFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVVME 104 (477)
Q Consensus 25 Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~lv~e 104 (477)
|++.+.||+|++|+||+|....+++.||+|.+...... .......+|+..+..+.+||||+++++++..++..|+|||
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e 78 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYS--WEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFE 78 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccc--hhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEe
Confidence 78899999999999999999989999999988654321 1223345688888888559999999999999999999999
Q ss_pred ccCCCchHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCCCcc
Q 042823 105 LCEGGDLFDRIIAKG--YNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQV 182 (477)
Q Consensus 105 ~~~gg~L~~~l~~~~--~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~ 182 (477)
|+ +|+|.+++.... .+++..+..++.|++.+|.|||++|++|+||+|+||++ +..+.++|+|||.+........
T Consensus 79 ~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~dl~~~ni~i---~~~~~~~l~d~~~~~~~~~~~~ 154 (283)
T cd07830 79 YM-EGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHGFFHRDLKPENLLV---SGPEVVKIADFGLAREIRSRPP 154 (283)
T ss_pred cC-CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEE---cCCCCEEEeecccceeccCCCC
Confidence 99 779999988765 78999999999999999999999999999999999999 7788999999999987655444
Q ss_pred eecccccccccchhhhhh--hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCcc-----------------
Q 042823 183 YRDIVGSGFYIAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEID----------------- 243 (477)
Q Consensus 183 ~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~----------------- 243 (477)
.....++..|+|||++.+ .++.++|+||||+++++|++|.+||...........+......
T Consensus 155 ~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (283)
T cd07830 155 YTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLASKLG 234 (283)
T ss_pred cCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhhcccc
Confidence 455678999999998743 4788999999999999999999999776654444333221000
Q ss_pred --CC-------CCCCCCCCHHHHHHHHHhcccCccccCCHHHHhcCccc
Q 042823 244 --FD-------TDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWL 283 (477)
Q Consensus 244 --~~-------~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~ 283 (477)
++ ....+..+..+.++|.+||+.+|++|||+.+++.||||
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~~~~ 283 (283)
T cd07830 235 FRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQHPYF 283 (283)
T ss_pred ccccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhhCCCC
Confidence 00 00112346889999999999999999999999999997
|
Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili |
| >cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-41 Score=329.65 Aligned_cols=265 Identities=25% Similarity=0.401 Sum_probs=212.2
Q ss_pred ccccccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEE
Q 042823 15 GKAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYE 94 (477)
Q Consensus 15 ~~~~~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~ 94 (477)
+.....+.++|.+.+.||+|+||.||+|.+..+++.||+|++..... .......+.+|+.++.++ +||||+++++++.
T Consensus 9 ~~~~~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~Ei~~l~~l-~h~~iv~~~~~~~ 86 (345)
T cd07877 9 NKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ-SIIHAKRTYRELRLLKHM-KHENVIGLLDVFT 86 (345)
T ss_pred HHHHhhccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcch-hhHHHHHHHHHHHHHHHc-CCCcccceeeeee
Confidence 34456778999999999999999999999999999999998865322 222345677899999999 7999999999886
Q ss_pred eC------CeEEEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEE
Q 042823 95 DE------TAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKV 168 (477)
Q Consensus 95 ~~------~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl 168 (477)
.. ...|++++++ |++|.+++.. ..+++..+..++.|++.||.|||+.|++||||||+||++ +.++.+||
T Consensus 87 ~~~~~~~~~~~~lv~~~~-~~~L~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll---~~~~~~kl 161 (345)
T cd07877 87 PARSLEEFNDVYLVTHLM-GADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV---NEDCELKI 161 (345)
T ss_pred ecccccccccEEEEehhc-ccCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEE---cCCCCEEE
Confidence 43 3478899887 6799777654 468999999999999999999999999999999999999 67788999
Q ss_pred eecCCccccCCCcceecccccccccchhhhhh--hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCc----
Q 042823 169 TDFGSALLFEEGQVYRDIVGSGFYIAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEI---- 242 (477)
Q Consensus 169 ~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~---- 242 (477)
+|||++...... .....|++.|+|||.+.+ .++.++||||+||++|+|++|.+||...........+.....
T Consensus 162 ~dfg~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 239 (345)
T cd07877 162 LDFGLARHTDDE--MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 239 (345)
T ss_pred eccccccccccc--ccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCH
Confidence 999998764332 234578899999999864 478899999999999999999999977655444333322110
Q ss_pred -------------------cCCC----CCCCCCCHHHHHHHHHhcccCccccCCHHHHhcCcccCcCCC
Q 042823 243 -------------------DFDT----DPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGE 288 (477)
Q Consensus 243 -------------------~~~~----~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~~~ 288 (477)
..+. ..+...++.+++||.+||+.||.+|||+.++++||||+....
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~f~~~~~ 308 (345)
T cd07877 240 ELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 308 (345)
T ss_pred HHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcChhhhhcCC
Confidence 0000 011246888999999999999999999999999999986543
|
Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14 |
| >cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-41 Score=321.28 Aligned_cols=255 Identities=21% Similarity=0.314 Sum_probs=209.9
Q ss_pred cccccccccccccccccCCeEEEEEEEccC-----CceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEE
Q 042823 18 YEDVMLHYFFGRMLGRGQFGVSYLCTENST-----NRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKST 92 (477)
Q Consensus 18 ~~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~-----~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~ 92 (477)
++.-.++|++.+.||+|+||.||+|.++.. ...+|+|.+.... .......+.+|+.++..+.+||||++++++
T Consensus 7 ~~~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~ 84 (293)
T cd05053 7 WELPRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDA--TEKDLSDLVSEMEMMKMIGKHKNIINLLGV 84 (293)
T ss_pred cccCHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCC--CHHHHHHHHHHHHHHHhhcCCCCeeeEEEE
Confidence 344456899999999999999999987643 3789999886432 223445688899999988679999999999
Q ss_pred EEeCCeEEEEEeccCCCchHHHHHHc----------------CCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcee
Q 042823 93 YEDETAVHVVMELCEGGDLFDRIIAK----------------GYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFS 156 (477)
Q Consensus 93 ~~~~~~~~lv~e~~~gg~L~~~l~~~----------------~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil 156 (477)
+..++.+++||||+++|+|.+++... +.+++..+..++.|++.||.|||++||+||||||+||+
T Consensus 85 ~~~~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~Nil 164 (293)
T cd05053 85 CTQEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKKCIHRDLAARNVL 164 (293)
T ss_pred EcCCCCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCCccccccceeeEE
Confidence 99999999999999999999998642 35788999999999999999999999999999999999
Q ss_pred eeecCCCCCEEEeecCCccccCCCcce---ecccccccccchhhhh-hhcCCccchHhHHHHHHHHhh-CCCCCCCCChh
Q 042823 157 FISRDDNALLKVTDFGSALLFEEGQVY---RDIVGSGFYIAPEVLR-RRYGKEIDIWSAGVILYILLS-GVPPFWAETKK 231 (477)
Q Consensus 157 ~~~~~~~~~~kl~Dfg~a~~~~~~~~~---~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~l~t-g~~pf~~~~~~ 231 (477)
+ +.++.+||+|||.+......... ....++..|+|||++. ..++.++|||||||++|+|++ |..||.+....
T Consensus 165 ~---~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~ 241 (293)
T cd05053 165 V---TEDHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVE 241 (293)
T ss_pred E---cCCCeEEeCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCCHH
Confidence 9 67789999999999865433211 1223456799999876 468899999999999999997 99999887776
Q ss_pred hHHHHHHcCCccCCCCCCCCCCHHHHHHHHHhcccCccccCCHHHHhcC
Q 042823 232 GTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEH 280 (477)
Q Consensus 232 ~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h 280 (477)
.....+..+... .....++..+.+|+.+||..||++|||+.+++++
T Consensus 242 ~~~~~~~~~~~~---~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~ 287 (293)
T cd05053 242 ELFKLLKEGYRM---EKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVED 287 (293)
T ss_pred HHHHHHHcCCcC---CCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHH
Confidence 666666554321 1223578999999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, |
| >cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-41 Score=325.91 Aligned_cols=256 Identities=26% Similarity=0.405 Sum_probs=205.0
Q ss_pred cccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeC-----
Q 042823 22 MLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDE----- 96 (477)
Q Consensus 22 ~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~----- 96 (477)
.++|++.+.||+|+||.||+|.++.+++.+|+|++....... .......+|+.+++.+ +||||+++++++...
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~-~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~~ 84 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKD-GFPITALREIKILKKL-KHPNVVPLIDMAVERPDKSK 84 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCC-CcchhHHHHHHHHHhc-CCCCccchhhheeccccccc
Confidence 679999999999999999999999999999999986543222 1223456899999999 799999999987443
Q ss_pred ---CeEEEEEeccCCCchHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecC
Q 042823 97 ---TAVHVVMELCEGGDLFDRIIA-KGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFG 172 (477)
Q Consensus 97 ---~~~~lv~e~~~gg~L~~~l~~-~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg 172 (477)
..+|+||||+.+ +|...+.. ...+++..+..++.|+++||.|||++|++||||||+||++ +.++.+||+|||
T Consensus 85 ~~~~~~~lv~~~~~~-~l~~~~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~H~dl~p~nil~---~~~~~~~l~dfg 160 (311)
T cd07866 85 RKRGSVYMVTPYMDH-DLSGLLENPSVKLTESQIKCYMLQLLEGINYLHENHILHRDIKAANILI---DNQGILKIADFG 160 (311)
T ss_pred ccCceEEEEEecCCc-CHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE---CCCCCEEECcCc
Confidence 357999999975 77777665 4578999999999999999999999999999999999999 778899999999
Q ss_pred CccccCCCcc------------eecccccccccchhhhhh--hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHH
Q 042823 173 SALLFEEGQV------------YRDIVGSGFYIAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAIL 238 (477)
Q Consensus 173 ~a~~~~~~~~------------~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~ 238 (477)
++........ .....|++.|+|||.+.+ .++.++||||+||++|+|++|.+||.+.+.......+.
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~~~~~~ 240 (311)
T cd07866 161 LARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQLHLIF 240 (311)
T ss_pred cchhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence 8875432211 122356888999998764 47899999999999999999999998776655544433
Q ss_pred cCCccCCC--------------------------CCCCCCCHHHHHHHHHhcccCccccCCHHHHhcCccc
Q 042823 239 QGEIDFDT--------------------------DPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWL 283 (477)
Q Consensus 239 ~~~~~~~~--------------------------~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~ 283 (477)
........ ..++.+++.+.+||.+||+.||++|||+.+++.||||
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~~~~f 311 (311)
T cd07866 241 KLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALEHPYF 311 (311)
T ss_pred HHhCCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhcCCCC
Confidence 21110000 0123456789999999999999999999999999997
|
Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic |
| >cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-41 Score=318.38 Aligned_cols=249 Identities=20% Similarity=0.292 Sum_probs=207.2
Q ss_pred ccccccccccccCCeEEEEEEEccC-----CceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCC
Q 042823 23 LHYFFGRMLGRGQFGVSYLCTENST-----NRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDET 97 (477)
Q Consensus 23 ~~Y~~~~~iG~G~~g~V~~~~~~~~-----~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~ 97 (477)
.+|++.+.||+|+||.||+|.+..+ ++.||+|++.... .......+.+|+.++..+ +||||+++++++....
T Consensus 5 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~~~~l-~h~~iv~~~~~~~~~~ 81 (283)
T cd05091 5 STVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKA--EGPLREEFKHEAMMRSRL-QHPNIVCLLGVVTKEQ 81 (283)
T ss_pred HHHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCC--CHHHHHHHHHHHHHHhcC-CCCCcCeEEEEEcCCC
Confidence 4689999999999999999987543 5789999986432 223345678899998888 7999999999999999
Q ss_pred eEEEEEeccCCCchHHHHHHc----------------CCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecC
Q 042823 98 AVHVVMELCEGGDLFDRIIAK----------------GYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRD 161 (477)
Q Consensus 98 ~~~lv~e~~~gg~L~~~l~~~----------------~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~ 161 (477)
..++++||+.+++|.+++... ..++...+..++.|++.||.|||++|++||||||+||++ .
T Consensus 82 ~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~gi~H~dlkp~Nil~---~ 158 (283)
T cd05091 82 PLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHHVVHKDLATRNVLV---F 158 (283)
T ss_pred ceEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcCccccccchhheEe---c
Confidence 999999999999999998632 347888899999999999999999999999999999998 6
Q ss_pred CCCCEEEeecCCccccCCCcc---eecccccccccchhhhh-hhcCCccchHhHHHHHHHHhh-CCCCCCCCChhhHHHH
Q 042823 162 DNALLKVTDFGSALLFEEGQV---YRDIVGSGFYIAPEVLR-RRYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDA 236 (477)
Q Consensus 162 ~~~~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~l~t-g~~pf~~~~~~~~~~~ 236 (477)
+.+.+||+|||++........ .....+++.|+|||.+. +.++.++|||||||++|+|++ |.+||.+....+....
T Consensus 159 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~ 238 (283)
T cd05091 159 DKLNVKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVIEM 238 (283)
T ss_pred CCCceEecccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Confidence 677899999998876533221 12335678899999985 568999999999999999998 8899988877777777
Q ss_pred HHcCCccCCCCCCCCCCHHHHHHHHHhcccCccccCCHHHHhcC
Q 042823 237 ILQGEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEH 280 (477)
Q Consensus 237 i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h 280 (477)
+..+..... ...+++.+.+++.+||+.+|.+||++.+++..
T Consensus 239 i~~~~~~~~---~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~ 279 (283)
T cd05091 239 IRNRQVLPC---PDDCPAWVYTLMLECWNEFPSRRPRFKDIHSR 279 (283)
T ss_pred HHcCCcCCC---CCCCCHHHHHHHHHHhCCCcccCCCHHHHHHH
Confidence 776653321 24688999999999999999999999999863
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly |
| >cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-41 Score=317.85 Aligned_cols=249 Identities=19% Similarity=0.281 Sum_probs=205.4
Q ss_pred ccccccccccccCCeEEEEEEEc----cCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCe
Q 042823 23 LHYFFGRMLGRGQFGVSYLCTEN----STNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETA 98 (477)
Q Consensus 23 ~~Y~~~~~iG~G~~g~V~~~~~~----~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~ 98 (477)
..|++.+.||+|+||+||+|.+. .++..+|+|.+.... .......+.+|+.++..+ +||||+++++++.....
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~ 81 (283)
T cd05090 5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDIN--NPQQWGEFQQEASLMAEL-HHPNIVCLLGVVTQEQP 81 (283)
T ss_pred hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCC--CHHHHHHHHHHHHHHhhC-CCCCeeeEEEEEecCCc
Confidence 57899999999999999999853 456789999886432 223446788899999999 79999999999999999
Q ss_pred EEEEEeccCCCchHHHHHHcC-----------------CCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecC
Q 042823 99 VHVVMELCEGGDLFDRIIAKG-----------------YNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRD 161 (477)
Q Consensus 99 ~~lv~e~~~gg~L~~~l~~~~-----------------~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~ 161 (477)
.|+||||+++|+|.+++.... .+++.++..++.|++.||.|||++|++||||||+||++ +
T Consensus 82 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~nili---~ 158 (283)
T cd05090 82 VCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHFFVHKDLAARNILI---G 158 (283)
T ss_pred eEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcCeehhccccceEEE---c
Confidence 999999999999999986432 36788889999999999999999999999999999999 6
Q ss_pred CCCCEEEeecCCccccCCCc---ceecccccccccchhhhh-hhcCCccchHhHHHHHHHHhh-CCCCCCCCChhhHHHH
Q 042823 162 DNALLKVTDFGSALLFEEGQ---VYRDIVGSGFYIAPEVLR-RRYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDA 236 (477)
Q Consensus 162 ~~~~~kl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~l~t-g~~pf~~~~~~~~~~~ 236 (477)
....+||+|||++....... ......++..|+|||++. +.++.++|||||||++|+|++ |.+||.+.........
T Consensus 159 ~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~~~~~~~ 238 (283)
T cd05090 159 EQLHVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQEVIEM 238 (283)
T ss_pred CCCcEEeccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Confidence 67889999999997653322 122334567799999986 468999999999999999998 9999988766666555
Q ss_pred HHcCCccCCCCCCCCCCHHHHHHHHHhcccCccccCCHHHHhcC
Q 042823 237 ILQGEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEH 280 (477)
Q Consensus 237 i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h 280 (477)
+...... .....+++.+.+++.+||+.||.+||++.+++++
T Consensus 239 ~~~~~~~---~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~ 279 (283)
T cd05090 239 VRKRQLL---PCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTR 279 (283)
T ss_pred HHcCCcC---CCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHH
Confidence 5544322 1224678999999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly |
| >PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-41 Score=316.25 Aligned_cols=244 Identities=28% Similarity=0.419 Sum_probs=200.2
Q ss_pred ccccccccCCeEEEEEEEc----cCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 042823 27 FGRMLGRGQFGVSYLCTEN----STNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVV 102 (477)
Q Consensus 27 ~~~~iG~G~~g~V~~~~~~----~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~lv 102 (477)
+.+.||.|+||.||+|.+. ..+..|+||.+.. .......+.+.+|++.+.++ +||||+++++++...+..++|
T Consensus 3 ~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~--~~~~~~~~~~~~e~~~l~~l-~h~ni~~~~g~~~~~~~~~lv 79 (259)
T PF07714_consen 3 LIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKP--SSSEEEEEEFLNEIQILRKL-RHPNIVKLYGFCIENEPLFLV 79 (259)
T ss_dssp EEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEEST--TSSHHHHHHHHHHHHHHHTH-SBTTBE-EEEEEESSSSEEEE
T ss_pred EeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEecc--ccccccceeeeecccccccc-ccccccccccccccccccccc
Confidence 5678999999999999987 4567899999843 23334577889999999999 899999999999988889999
Q ss_pred EeccCCCchHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCCC
Q 042823 103 MELCEGGDLFDRIIAK--GYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEG 180 (477)
Q Consensus 103 ~e~~~gg~L~~~l~~~--~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~ 180 (477)
+|||++|+|.+++... ..++..++..++.||+.||.|||+++++||+|+|+||++ +.++.+||+|||++......
T Consensus 80 ~e~~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~iiH~~l~~~nill---~~~~~~Kl~~f~~~~~~~~~ 156 (259)
T PF07714_consen 80 MEYCPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSNNIIHGNLSPSNILL---DSNGQVKLSDFGLSRPISEK 156 (259)
T ss_dssp EE--TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEE---ETTTEEEEESTTTGEETTTS
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccccc---cccccccccccccccccccc
Confidence 9999999999999987 678999999999999999999999999999999999999 67889999999999876322
Q ss_pred cc---eecccccccccchhhhhh-hcCCccchHhHHHHHHHHhh-CCCCCCCCChhhHHHHHHcCCccCCCCCCCCCCHH
Q 042823 181 QV---YRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQGEIDFDTDPWPSISST 255 (477)
Q Consensus 181 ~~---~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~t-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 255 (477)
.. .....+...|+|||.+.. .++.++||||||+++||+++ |..||...........+..+.... ..+.++..
T Consensus 157 ~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ 233 (259)
T PF07714_consen 157 SKYKNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDNEEIIEKLKQGQRLP---IPDNCPKD 233 (259)
T ss_dssp SSEEESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCHHHHHHHHHTTEETT---SBTTSBHH
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccce---eccchhHH
Confidence 21 122346778999999875 58999999999999999999 789998887777777775554322 12457999
Q ss_pred HHHHHHHhcccCccccCCHHHHhc
Q 042823 256 AKDLVRRMLTKDPKRRITAAQVLE 279 (477)
Q Consensus 256 ~~~li~~~l~~dp~~R~s~~~~l~ 279 (477)
+.++|..||..+|++|||+.++++
T Consensus 234 ~~~li~~C~~~~p~~RPs~~~i~~ 257 (259)
T PF07714_consen 234 IYSLIQQCWSHDPEKRPSFQEILQ 257 (259)
T ss_dssp HHHHHHHHT-SSGGGS--HHHHHH
T ss_pred HHHHHHHHcCCChhhCcCHHHHHh
Confidence 999999999999999999999975
|
Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A .... |
| >cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-41 Score=323.86 Aligned_cols=248 Identities=19% Similarity=0.219 Sum_probs=202.0
Q ss_pred ccccccccccccCCeEEEEEEEccCCce----EEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCe
Q 042823 23 LHYFFGRMLGRGQFGVSYLCTENSTNRP----YACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETA 98 (477)
Q Consensus 23 ~~Y~~~~~iG~G~~g~V~~~~~~~~~~~----~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~ 98 (477)
.+|++.+.||+|+||.||+|.+..++.. ||+|++.... .......+.+|+.++..+ +||||+++++++... .
T Consensus 7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~l~~l-~h~niv~~~g~~~~~-~ 82 (316)
T cd05108 7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT--SPKANKEILDEAYVMASV-DNPHVCRLLGICLTS-T 82 (316)
T ss_pred hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccC--CHHHHHHHHHHHHHHHhC-CCCCCCeEEEEEcCC-C
Confidence 4799999999999999999998766654 8999875332 223456678899999998 799999999998765 5
Q ss_pred EEEEEeccCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCcccc
Q 042823 99 VHVVMELCEGGDLFDRIIAK-GYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLF 177 (477)
Q Consensus 99 ~~lv~e~~~gg~L~~~l~~~-~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~ 177 (477)
.++|+||+++|+|.+++... ..++...+..++.||+.||.|||++||+||||||+||++ +.++.+||+|||++...
T Consensus 83 ~~~v~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~iiH~dlkp~Nill---~~~~~~kl~DfG~a~~~ 159 (316)
T cd05108 83 VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEERRLVHRDLAARNVLV---KTPQHVKITDFGLAKLL 159 (316)
T ss_pred ceeeeecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEe---cCCCcEEEccccccccc
Confidence 67999999999999999875 468889999999999999999999999999999999999 67788999999999876
Q ss_pred CCCcce---ecccccccccchhhhhh-hcCCccchHhHHHHHHHHhh-CCCCCCCCChhhHHHHHHcCCccCCCCCCCCC
Q 042823 178 EEGQVY---RDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQGEIDFDTDPWPSI 252 (477)
Q Consensus 178 ~~~~~~---~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~t-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 252 (477)
...... ....++..|+|||.+.+ .++.++|||||||++|+|++ |..||.+.........+ ......+. .+.+
T Consensus 160 ~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~~~~~~~-~~~~~~~~--~~~~ 236 (316)
T cd05108 160 GADEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL-EKGERLPQ--PPIC 236 (316)
T ss_pred cCCCcceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH-hCCCCCCC--CCCC
Confidence 433221 12234667999999864 68999999999999999998 99999876655544333 33222222 2457
Q ss_pred CHHHHHHHHHhcccCccccCCHHHHhcC
Q 042823 253 SSTAKDLVRRMLTKDPKRRITAAQVLEH 280 (477)
Q Consensus 253 ~~~~~~li~~~l~~dp~~R~s~~~~l~h 280 (477)
+..+.+++.+||..+|++|||+.+++.+
T Consensus 237 ~~~~~~li~~cl~~~p~~Rps~~~l~~~ 264 (316)
T cd05108 237 TIDVYMIMVKCWMIDADSRPKFRELIIE 264 (316)
T ss_pred CHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 8899999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor |
| >cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-41 Score=329.76 Aligned_cols=263 Identities=25% Similarity=0.401 Sum_probs=211.1
Q ss_pred cccccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEe
Q 042823 16 KAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYED 95 (477)
Q Consensus 16 ~~~~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~ 95 (477)
+....+..+|.+.+.||+|+||.||+|.+..+|+.||+|++.+.... ......+.+|+.++..+ +||||+++++++..
T Consensus 8 ~~~~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~ 85 (342)
T cd07879 8 KTVWELPERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQS-EIFAKRAYRELTLLKHM-QHENVIGLLDVFTS 85 (342)
T ss_pred hhhhccccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCcccc-ccchhHHHHHHHHHHhc-CCCCccchhheecc
Confidence 44456678999999999999999999999999999999998654221 22334577899999999 79999999999875
Q ss_pred C------CeEEEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEe
Q 042823 96 E------TAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVT 169 (477)
Q Consensus 96 ~------~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~ 169 (477)
. ..+|+|+||+.+ +|..++ ...+++..+..++.|++.||.|||++|++||||||+||++ +.++.+||+
T Consensus 86 ~~~~~~~~~~~lv~e~~~~-~l~~~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dlkp~NIll---~~~~~~kL~ 159 (342)
T cd07879 86 AVSGDEFQDFYLVMPYMQT-DLQKIM--GHPLSEDKVQYLVYQMLCGLKYIHSAGIIHRDLKPGNLAV---NEDCELKIL 159 (342)
T ss_pred cccCCCCceEEEEeccccc-CHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEE---CCCCCEEEe
Confidence 4 346999999964 776654 3468999999999999999999999999999999999999 678899999
Q ss_pred ecCCccccCCCcceecccccccccchhhhhh--hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCC------
Q 042823 170 DFGSALLFEEGQVYRDIVGSGFYIAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGE------ 241 (477)
Q Consensus 170 Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~------ 241 (477)
|||++...... .....+++.|+|||++.+ .++.++|||||||++|+|++|+.||.+......+..+....
T Consensus 160 dfg~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 237 (342)
T cd07879 160 DFGLARHADAE--MTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGPE 237 (342)
T ss_pred eCCCCcCCCCC--CCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHH
Confidence 99998764322 234567889999999864 47889999999999999999999998766544443333210
Q ss_pred -----------------ccCCCC----CCCCCCHHHHHHHHHhcccCccccCCHHHHhcCcccCcCCC
Q 042823 242 -----------------IDFDTD----PWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGE 288 (477)
Q Consensus 242 -----------------~~~~~~----~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~~~ 288 (477)
...+.. .++..++.+.+||.+||+.||++||++.+++.||||.....
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~~~~~ 305 (342)
T cd07879 238 FVQKLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEHPYFDSFRD 305 (342)
T ss_pred HHHHhcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcchhhccc
Confidence 000111 13457889999999999999999999999999999976543
|
Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13 |
| >cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-41 Score=320.68 Aligned_cols=253 Identities=32% Similarity=0.498 Sum_probs=209.9
Q ss_pred ccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEe
Q 042823 25 YFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVVME 104 (477)
Q Consensus 25 Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~lv~e 104 (477)
|.+.+.||+|++|.||+|.+..+++.+|+|.+...... ......+.+|+.+++.+ +||||+++++++..+...|+|+|
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~~v~e 78 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFES-EGIPKTALREIKLLKEL-NHPNIIKLLDVFRHKGDLYLVFE 78 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEecccccc-chhHHHHHHHHHHHHHh-cCCCcchHHHhhccCCCEEEEEe
Confidence 67889999999999999999989999999998654322 23345677899999999 69999999999999999999999
Q ss_pred ccCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCCCc-c
Q 042823 105 LCEGGDLFDRIIAK-GYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQ-V 182 (477)
Q Consensus 105 ~~~gg~L~~~l~~~-~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~-~ 182 (477)
|+++ +|.+++... ..+++..+..++.|++.||.|||++|++|+||||+||++ +.++.+||+|||.+....... .
T Consensus 79 ~~~~-~l~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili---~~~~~~~l~df~~~~~~~~~~~~ 154 (283)
T cd05118 79 FMDT-DLYKLIKDRQRGLPESLIKSYLYQLLQGLAFCHSHGILHRDLKPENLLI---NTEGVLKLADFGLARSFGSPVRP 154 (283)
T ss_pred ccCC-CHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHHCCeeecCcCHHHEEE---CCCCcEEEeeeeeeEecCCCccc
Confidence 9976 888888764 578999999999999999999999999999999999999 677889999999987765443 2
Q ss_pred eecccccccccchhhhhh--hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCcc-----------------
Q 042823 183 YRDIVGSGFYIAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEID----------------- 243 (477)
Q Consensus 183 ~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~----------------- 243 (477)
.....++..|+|||.+.+ .++.++|+||+|+++|+|+||++||...+..+....+......
T Consensus 155 ~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (283)
T cd05118 155 YTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKFTSLARNYK 234 (283)
T ss_pred ccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCchHhcccchhhhhhhh
Confidence 334568889999999864 4788999999999999999999999877665544443221100
Q ss_pred --CC-------CCCCCCCCHHHHHHHHHhcccCccccCCHHHHhcCccc
Q 042823 244 --FD-------TDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWL 283 (477)
Q Consensus 244 --~~-------~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~ 283 (477)
++ ...++.++.++.+||.+||+.||.+||++.++++||||
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~~~~~ 283 (283)
T cd05118 235 FSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALAHPYF 283 (283)
T ss_pred hhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhhCCCC
Confidence 00 01123578899999999999999999999999999997
|
Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They |
| >cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-40 Score=312.10 Aligned_cols=246 Identities=22% Similarity=0.317 Sum_probs=204.4
Q ss_pred ccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 042823 23 LHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVV 102 (477)
Q Consensus 23 ~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~lv 102 (477)
.+|++.+.||+|+||.||+|.++ ++..+|+|++.+... ....+.+|+.++..+ +||||+++++++...+..|+|
T Consensus 4 ~~~~~~~~lg~G~~~~v~~~~~~-~~~~~~iK~~~~~~~----~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~lv 77 (256)
T cd05059 4 SELTFLKELGSGQFGVVHLGKWR-GKIDVAIKMIREGAM----SEDDFIEEAKVMMKL-SHPNLVQLYGVCTKQRPIFIV 77 (256)
T ss_pred HHcchhhhhccCCCceEEEeEec-CCccEEEEEeccCCC----CHHHHHHHHHHHHhC-CCCCEEEEEEEEcCCCceEEE
Confidence 46899999999999999999886 466899998864322 234567899999998 799999999999999999999
Q ss_pred EeccCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCCCc
Q 042823 103 MELCEGGDLFDRIIAK-GYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQ 181 (477)
Q Consensus 103 ~e~~~gg~L~~~l~~~-~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~ 181 (477)
|||++|++|.+++... +.+++..+..++.|++.||.|||+.|++||||||+||++ +.++.+||+|||.+.......
T Consensus 78 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~ni~i---~~~~~~kl~dfg~~~~~~~~~ 154 (256)
T cd05059 78 TEYMANGCLLNYLRERKGKLGTEWLLDMCSDVCEAMEYLESNGFIHRDLAARNCLV---GEDNVVKVSDFGLARYVLDDQ 154 (256)
T ss_pred EecCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCcccccccHhhEEE---CCCCcEEECCcccceeccccc
Confidence 9999999999999764 468999999999999999999999999999999999999 677889999999887654322
Q ss_pred ce--ecccccccccchhhhh-hhcCCccchHhHHHHHHHHhh-CCCCCCCCChhhHHHHHHcCCccCCCCCCCCCCHHHH
Q 042823 182 VY--RDIVGSGFYIAPEVLR-RRYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAK 257 (477)
Q Consensus 182 ~~--~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~l~t-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 257 (477)
.. ....++..|+|||.+. ..++.++||||||+++|+|++ |.+||......+....+..+... ...+.+|+.+.
T Consensus 155 ~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~ 231 (256)
T cd05059 155 YTSSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSEVVESVSAGYRL---YRPKLAPTEVY 231 (256)
T ss_pred ccccCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHcCCcC---CCCCCCCHHHH
Confidence 11 1122345799999986 468899999999999999999 89999877777666666554221 12245799999
Q ss_pred HHHHHhcccCccccCCHHHHhcC
Q 042823 258 DLVRRMLTKDPKRRITAAQVLEH 280 (477)
Q Consensus 258 ~li~~~l~~dp~~R~s~~~~l~h 280 (477)
+++.+||..+|++|||+.++++.
T Consensus 232 ~li~~cl~~~p~~Rpt~~~~l~~ 254 (256)
T cd05059 232 TIMYSCWHEKPEDRPAFKKLLSQ 254 (256)
T ss_pred HHHHHHhcCChhhCcCHHHHHHH
Confidence 99999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows |
| >cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-40 Score=311.98 Aligned_cols=241 Identities=22% Similarity=0.278 Sum_probs=199.9
Q ss_pred cccccCCeEEEEEEE--ccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEeccC
Q 042823 30 MLGRGQFGVSYLCTE--NSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVVMELCE 107 (477)
Q Consensus 30 ~iG~G~~g~V~~~~~--~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~lv~e~~~ 107 (477)
.||+|+||.||+|.+ +.++..+|+|++.... ........+.+|+.++..+ +||||+++++++. ....++||||++
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~-~~~~~lv~e~~~ 78 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDN-NDPALKDELLREANVMQQL-DNPYIVRMIGICE-AESWMLVMELAE 78 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCC-CcHHHHHHHHHHHHHHHhC-CCCCcceEEEEEc-CCCcEEEEecCC
Confidence 689999999999965 4577899999886432 2334456788899999998 7999999999886 456789999999
Q ss_pred CCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCCCcce----
Q 042823 108 GGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVY---- 183 (477)
Q Consensus 108 gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~---- 183 (477)
+|+|.+++...+.+++..+..++.|++.||.|||++|++||||||.||++ +.++.+||+|||++.........
T Consensus 79 ~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~nill---~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 155 (257)
T cd05116 79 LGPLNKFLQKNKHVTEKNITELVHQVSMGMKYLEETNFVHRDLAARNVLL---VTQHYAKISDFGLSKALGADENYYKAK 155 (257)
T ss_pred CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchhhEEE---cCCCeEEECCCccccccCCCCCeeeec
Confidence 99999999888889999999999999999999999999999999999999 66788999999998765433211
Q ss_pred ecccccccccchhhhhh-hcCCccchHhHHHHHHHHhh-CCCCCCCCChhhHHHHHHcCCccCCCCCCCCCCHHHHHHHH
Q 042823 184 RDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVR 261 (477)
Q Consensus 184 ~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~t-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~ 261 (477)
....+++.|+|||.+.. .++.++|||||||++|+|++ |.+||...........+.++... +..+.+++++.++|.
T Consensus 156 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~i~~~~~~---~~~~~~~~~l~~li~ 232 (257)
T cd05116 156 THGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNEVTQMIESGERM---ECPQRCPPEMYDLMK 232 (257)
T ss_pred CCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHCCCCC---CCCCCCCHHHHHHHH
Confidence 12234578999999864 57889999999999999998 99999887777666666654321 122468999999999
Q ss_pred HhcccCccccCCHHHHhc
Q 042823 262 RMLTKDPKRRITAAQVLE 279 (477)
Q Consensus 262 ~~l~~dp~~R~s~~~~l~ 279 (477)
+||+.||++||++.++..
T Consensus 233 ~~~~~~p~~Rp~~~~i~~ 250 (257)
T cd05116 233 LCWTYGVDERPGFAVVEL 250 (257)
T ss_pred HHhccCchhCcCHHHHHH
Confidence 999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio |
| >cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-40 Score=320.88 Aligned_cols=254 Identities=20% Similarity=0.285 Sum_probs=207.8
Q ss_pred cccccccccccccccccCCeEEEEEEEcc-------CCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEE
Q 042823 18 YEDVMLHYFFGRMLGRGQFGVSYLCTENS-------TNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFK 90 (477)
Q Consensus 18 ~~~~~~~Y~~~~~iG~G~~g~V~~~~~~~-------~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~ 90 (477)
+....++|.+++.||+|+||.||+|.+.. ....+|+|.+.... .......+.+|+.++..+.+||||++++
T Consensus 7 ~~~~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~iv~~~ 84 (314)
T cd05099 7 WEFPRDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNA--TDKDLADLISEMELMKLIGKHKNIINLL 84 (314)
T ss_pred ccccHHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCC--ChHHHHHHHHHHHHHHhccCCCCeeeEE
Confidence 34556789999999999999999998632 34578999876432 2234566888999999997799999999
Q ss_pred EEEEeCCeEEEEEeccCCCchHHHHHHc----------------CCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCc
Q 042823 91 STYEDETAVHVVMELCEGGDLFDRIIAK----------------GYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPEN 154 (477)
Q Consensus 91 ~~~~~~~~~~lv~e~~~gg~L~~~l~~~----------------~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~N 154 (477)
+++.....+|+||||+++|+|.+++... ..++..++..++.|++.||.|||++|++||||||+|
T Consensus 85 ~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~N 164 (314)
T cd05099 85 GVCTQEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRRCIHRDLAARN 164 (314)
T ss_pred EEEccCCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCCeeecccccee
Confidence 9999999999999999999999999763 247888899999999999999999999999999999
Q ss_pred eeeeecCCCCCEEEeecCCccccCCCcc---eecccccccccchhhhhh-hcCCccchHhHHHHHHHHhh-CCCCCCCCC
Q 042823 155 FSFISRDDNALLKVTDFGSALLFEEGQV---YRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLS-GVPPFWAET 229 (477)
Q Consensus 155 il~~~~~~~~~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~t-g~~pf~~~~ 229 (477)
|++ +.++.+||+|||.+........ .....+++.|+|||++.+ .++.++|||||||++|+|++ |..||.+..
T Consensus 165 ill---~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~ 241 (314)
T cd05099 165 VLV---TEDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIP 241 (314)
T ss_pred EEE---cCCCcEEEccccccccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCC
Confidence 999 6678899999999976543211 111234567999999864 58899999999999999999 899998877
Q ss_pred hhhHHHHHHcCCccCCCCCCCCCCHHHHHHHHHhcccCccccCCHHHHhc
Q 042823 230 KKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLE 279 (477)
Q Consensus 230 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~ 279 (477)
..+....+..+... .....++.++++++.+||..+|++|||+.++++
T Consensus 242 ~~~~~~~~~~~~~~---~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~ 288 (314)
T cd05099 242 VEELFKLLREGHRM---DKPSNCTHELYMLMRECWHAVPTQRPTFKQLVE 288 (314)
T ss_pred HHHHHHHHHcCCCC---CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence 77766666554321 122467889999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-40 Score=313.45 Aligned_cols=249 Identities=22% Similarity=0.330 Sum_probs=207.7
Q ss_pred ccccccccccccCCeEEEEEEEccC---CceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeE
Q 042823 23 LHYFFGRMLGRGQFGVSYLCTENST---NRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAV 99 (477)
Q Consensus 23 ~~Y~~~~~iG~G~~g~V~~~~~~~~---~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~ 99 (477)
++|.+.+.||+|+||+||+|.++.+ ...||+|++.... .......+.+|+.++..+ +||||+++++++......
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~--~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~ 80 (266)
T cd05033 4 SYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGS--SDKQRLDFLTEASIMGQF-DHPNIIRLEGVVTKSRPV 80 (266)
T ss_pred HHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCC--ChHHHHHHHHHHHHHHhC-CCCCcceEeEEEecCCce
Confidence 5799999999999999999998654 4579999876432 233455678899999999 799999999999999999
Q ss_pred EEEEeccCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccC
Q 042823 100 HVVMELCEGGDLFDRIIAK-GYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFE 178 (477)
Q Consensus 100 ~lv~e~~~gg~L~~~l~~~-~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~ 178 (477)
++||||+++++|.+++... +.++...+..++.|++.||.|||++||+||||||+||++ +.++.+||+|||++....
T Consensus 81 ~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~di~p~nili---~~~~~~~l~dfg~~~~~~ 157 (266)
T cd05033 81 MIITEYMENGSLDKFLRENDGKFTVGQLVGMLRGIASGMKYLSEMNYVHRDLAARNILV---NSNLVCKVSDFGLSRRLE 157 (266)
T ss_pred EEEEEcCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEE---cCCCCEEECccchhhccc
Confidence 9999999999999998764 468999999999999999999999999999999999999 678889999999998764
Q ss_pred CCc-ce--ecccccccccchhhhhh-hcCCccchHhHHHHHHHHhh-CCCCCCCCChhhHHHHHHcCCccCCCCCCCCCC
Q 042823 179 EGQ-VY--RDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQGEIDFDTDPWPSIS 253 (477)
Q Consensus 179 ~~~-~~--~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~t-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 253 (477)
... .. ....+++.|+|||.+.+ .++.++||||||+++|+|++ |..||...........+..+... +....++
T Consensus 158 ~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~---~~~~~~~ 234 (266)
T cd05033 158 DSEATYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQDVIKAVEDGYRL---PPPMDCP 234 (266)
T ss_pred ccccceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHcCCCC---CCCCCCC
Confidence 211 11 12234567999999864 68899999999999999998 99999887777766666554221 1224578
Q ss_pred HHHHHHHHHhcccCccccCCHHHHhcC
Q 042823 254 STAKDLVRRMLTKDPKRRITAAQVLEH 280 (477)
Q Consensus 254 ~~~~~li~~~l~~dp~~R~s~~~~l~h 280 (477)
+.+.+++.+||+.+|++||++.+++++
T Consensus 235 ~~l~~li~~cl~~~p~~Rp~~~ei~~~ 261 (266)
T cd05033 235 SALYQLMLDCWQKDRNERPTFSQIVST 261 (266)
T ss_pred HHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 999999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment |
| >cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-41 Score=314.63 Aligned_cols=249 Identities=20% Similarity=0.275 Sum_probs=210.0
Q ss_pred cccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeE
Q 042823 20 DVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAV 99 (477)
Q Consensus 20 ~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~ 99 (477)
....+|++.+.||.|+||.||+|.++. +..+|+|++..... .....+.+|+.+++.+ +||||+++++++.....+
T Consensus 3 ~~~~~y~~~~~ig~g~~~~vy~~~~~~-~~~~~~k~~~~~~~---~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~ 77 (261)
T cd05148 3 RPREEFTLERKLGSGYFGEVWEGLWKN-RVRVAIKILKSDDL---LKQQDFQKEVQALKRL-RHKHLISLFAVCSVGEPV 77 (261)
T ss_pred CcHHHHHHhhhhccCCCccEEEeEecC-CCcEEEEeccccch---hhHHHHHHHHHHHhcC-CCcchhheeeeEecCCCe
Confidence 445689999999999999999999977 88999999865432 2355688899999999 799999999999999999
Q ss_pred EEEEeccCCCchHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCcccc
Q 042823 100 HVVMELCEGGDLFDRIIAK--GYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLF 177 (477)
Q Consensus 100 ~lv~e~~~gg~L~~~l~~~--~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~ 177 (477)
++||||+++|+|.+++... ..++...+..++.||+.||.|||++|++||||||+||++ +.++.+||+|||.+...
T Consensus 78 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~h~dl~~~nilv---~~~~~~kl~d~g~~~~~ 154 (261)
T cd05148 78 YIITELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQNSIHRDLAARNILV---GEDLVCKVADFGLARLI 154 (261)
T ss_pred EEEEeecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccCcceEEE---cCCceEEEccccchhhc
Confidence 9999999999999999763 457899999999999999999999999999999999999 67788999999998765
Q ss_pred CCCcc-eecccccccccchhhhhh-hcCCccchHhHHHHHHHHhh-CCCCCCCCChhhHHHHHHcCCccCCCCCCCCCCH
Q 042823 178 EEGQV-YRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQGEIDFDTDPWPSISS 254 (477)
Q Consensus 178 ~~~~~-~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~t-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 254 (477)
..... .....+++.|+|||++.+ .++.++||||||+++|+|++ |..||......+....+..+.. . +..+.+++
T Consensus 155 ~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~-~--~~~~~~~~ 231 (261)
T cd05148 155 KEDVYLSSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHEVYDQITAGYR-M--PCPAKCPQ 231 (261)
T ss_pred CCccccccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHHhCCc-C--CCCCCCCH
Confidence 43221 123345677999999864 58889999999999999998 8999988777777776664321 1 22257889
Q ss_pred HHHHHHHHhcccCccccCCHHHHhc
Q 042823 255 TAKDLVRRMLTKDPKRRITAAQVLE 279 (477)
Q Consensus 255 ~~~~li~~~l~~dp~~R~s~~~~l~ 279 (477)
.+.+++.+||+.||++|||+.++++
T Consensus 232 ~~~~~i~~~l~~~p~~Rpt~~~l~~ 256 (261)
T cd05148 232 EIYKIMLECWAAEPEDRPSFKALRE 256 (261)
T ss_pred HHHHHHHHHcCCCchhCcCHHHHHH
Confidence 9999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom |
| >cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-40 Score=313.56 Aligned_cols=243 Identities=21% Similarity=0.281 Sum_probs=197.9
Q ss_pred ccccccCCeEEEEEEEccCCce--EEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEecc
Q 042823 29 RMLGRGQFGVSYLCTENSTNRP--YACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVVMELC 106 (477)
Q Consensus 29 ~~iG~G~~g~V~~~~~~~~~~~--~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~lv~e~~ 106 (477)
+.||+|+||.||+|.++.++.. +|+|.+... ........+.+|+.++..+.+||||+++++++...+..|+||||+
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~ 78 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEY--ASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYA 78 (270)
T ss_pred CcCCCCCCceEEEEEEcCCCCeeEEEEEEcccc--CCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeC
Confidence 4699999999999999887764 577776532 122345678889999999978999999999999999999999999
Q ss_pred CCCchHHHHHHcC----------------CCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEee
Q 042823 107 EGGDLFDRIIAKG----------------YNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTD 170 (477)
Q Consensus 107 ~gg~L~~~l~~~~----------------~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~D 170 (477)
++|+|.+++.... .++..++..++.|++.||.|||++|++||||||+||++ +.++.+||+|
T Consensus 79 ~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nili---~~~~~~kl~d 155 (270)
T cd05047 79 PHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILV---GENYVAKIAD 155 (270)
T ss_pred CCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccccceEEE---cCCCeEEECC
Confidence 9999999997643 46888999999999999999999999999999999999 7788999999
Q ss_pred cCCccccCCCcceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhh-CCCCCCCCChhhHHHHHHcCCccCCCCC
Q 042823 171 FGSALLFEEGQVYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQGEIDFDTDP 248 (477)
Q Consensus 171 fg~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~t-g~~pf~~~~~~~~~~~i~~~~~~~~~~~ 248 (477)
||++..............++.|+|||++.. .++.++|||||||++|+|++ |..||.+.+.......+..+.. ...
T Consensus 156 fgl~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~---~~~ 232 (270)
T cd05047 156 FGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYR---LEK 232 (270)
T ss_pred CCCccccchhhhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCHHHHHHHHhCCCC---CCC
Confidence 998853321111111233567999999864 58889999999999999997 9999988776666666554321 112
Q ss_pred CCCCCHHHHHHHHHhcccCccccCCHHHHhc
Q 042823 249 WPSISSTAKDLVRRMLTKDPKRRITAAQVLE 279 (477)
Q Consensus 249 ~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~ 279 (477)
...++.++.+++.+||..+|.+|||+.+++.
T Consensus 233 ~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 263 (270)
T cd05047 233 PLNCDDEVYDLMRQCWREKPYERPSFAQILV 263 (270)
T ss_pred CCcCCHHHHHHHHHHcccChhhCCCHHHHHH
Confidence 2357889999999999999999999999975
|
Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l |
| >cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-40 Score=313.01 Aligned_cols=247 Identities=23% Similarity=0.315 Sum_probs=203.5
Q ss_pred cccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeE
Q 042823 20 DVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAV 99 (477)
Q Consensus 20 ~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~ 99 (477)
...++|++.+.||+|+||.||+|.+..+ ..||+|++..... ....+.+|++++..+ +||||+++++.+. ....
T Consensus 3 ~~~~~~~~~~~lg~g~~~~v~~~~~~~~-~~valK~~~~~~~----~~~~~~~E~~~l~~l-~~~~i~~~~~~~~-~~~~ 75 (262)
T cd05071 3 IPRESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTM----SPEAFLQEAQVMKKL-RHEKLVQLYAVVS-EEPI 75 (262)
T ss_pred CChHHeeEeeecCCCCCCcEEEEEecCC-ceEEEEecccCcc----CHHHHHHHHHHHHhC-CCCCcceEEEEEC-CCCc
Confidence 4457899999999999999999988655 4699998864322 234678899999999 7999999999875 4568
Q ss_pred EEEEeccCCCchHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCcccc
Q 042823 100 HVVMELCEGGDLFDRIIAK--GYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLF 177 (477)
Q Consensus 100 ~lv~e~~~gg~L~~~l~~~--~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~ 177 (477)
|+||||+++|+|.+++... ..+++..+..++.|++.||.|||+.+++||||||+||++ +.++.+||+|||.+...
T Consensus 76 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~Nill---~~~~~~~L~dfg~~~~~ 152 (262)
T cd05071 76 YIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILV---GENLVCKVADFGLARLI 152 (262)
T ss_pred EEEEEcCCCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcccEEE---cCCCcEEeccCCceeec
Confidence 9999999999999999763 357889999999999999999999999999999999998 67788999999998765
Q ss_pred CCCcc--eecccccccccchhhhh-hhcCCccchHhHHHHHHHHhh-CCCCCCCCChhhHHHHHHcCCccCCCCCCCCCC
Q 042823 178 EEGQV--YRDIVGSGFYIAPEVLR-RRYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQGEIDFDTDPWPSIS 253 (477)
Q Consensus 178 ~~~~~--~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~l~t-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 253 (477)
..... .....++..|+|||+.. +.++.++|||||||++|+|+| |.+||...........+..+.. . ...+.++
T Consensus 153 ~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~~~~~~~~~~~-~--~~~~~~~ 229 (262)
T cd05071 153 EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYR-M--PCPPECP 229 (262)
T ss_pred cccccccccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHhcCCC-C--CCccccC
Confidence 43322 12234567899999875 468999999999999999999 8999988777766666654421 1 1124678
Q ss_pred HHHHHHHHHhcccCccccCCHHHHhc
Q 042823 254 STAKDLVRRMLTKDPKRRITAAQVLE 279 (477)
Q Consensus 254 ~~~~~li~~~l~~dp~~R~s~~~~l~ 279 (477)
..+.+++.+||+.+|++||++.++++
T Consensus 230 ~~l~~li~~~l~~~p~~Rp~~~~~~~ 255 (262)
T cd05071 230 ESLHDLMCQCWRKEPEERPTFEYLQA 255 (262)
T ss_pred HHHHHHHHHHccCCcccCCCHHHHHH
Confidence 99999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo |
| >cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-40 Score=312.49 Aligned_cols=248 Identities=22% Similarity=0.271 Sum_probs=206.3
Q ss_pred cccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeE
Q 042823 20 DVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAV 99 (477)
Q Consensus 20 ~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~ 99 (477)
...++|++.+.||+|++|.||+|.+. +++.||+|.+..... ....+.+|+.++.++ +||||+++++++...+..
T Consensus 3 ~~~~~~~~~~~lg~g~~~~v~~~~~~-~~~~v~iK~~~~~~~----~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~ 76 (261)
T cd05068 3 IDRTSIQLLRKLGAGQFGEVWEGLWN-NTTPVAVKTLKPGTM----DPKDFLAEAQIMKKL-RHPKLIQLYAVCTLEEPI 76 (261)
T ss_pred cchhheeeEEEecccCCccEEEEEec-CCeEEEEEeeCCCcc----cHHHHHHHHHHHHHC-CCCCccceeEEEecCCCe
Confidence 44578999999999999999999875 457899998864321 235678899999999 699999999999999999
Q ss_pred EEEEeccCCCchHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCcccc
Q 042823 100 HVVMELCEGGDLFDRIIAKG--YNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLF 177 (477)
Q Consensus 100 ~lv~e~~~gg~L~~~l~~~~--~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~ 177 (477)
|+||||++|++|.+++.... .++...+..++.|++.||.|||++|++||||||+||++ +.++.+||+|||++...
T Consensus 77 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~---~~~~~~~l~dfg~~~~~ 153 (261)
T cd05068 77 YIVTELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQNYIHRDLAARNVLV---GENNICKVADFGLARVI 153 (261)
T ss_pred eeeeecccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCcceEEE---cCCCCEEECCcceEEEc
Confidence 99999999999999997654 68999999999999999999999999999999999999 67788999999998766
Q ss_pred CCCcce--ecccccccccchhhhhh-hcCCccchHhHHHHHHHHhh-CCCCCCCCChhhHHHHHHcCCccCCCCCCCCCC
Q 042823 178 EEGQVY--RDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQGEIDFDTDPWPSIS 253 (477)
Q Consensus 178 ~~~~~~--~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~t-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 253 (477)
...... .....+..|+|||.+.+ .++.++||||||+++|+|+| |..||.+.........+.... ..+ ..+.++
T Consensus 154 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~-~~~--~~~~~~ 230 (261)
T cd05068 154 KEDIYEAREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAEVLQQVDQGY-RMP--CPPGCP 230 (261)
T ss_pred cCCcccccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCC-CCC--CCCcCC
Confidence 432211 11122457999998864 58899999999999999999 999998877766666665442 211 224678
Q ss_pred HHHHHHHHHhcccCccccCCHHHHhc
Q 042823 254 STAKDLVRRMLTKDPKRRITAAQVLE 279 (477)
Q Consensus 254 ~~~~~li~~~l~~dp~~R~s~~~~l~ 279 (477)
+.+.+++.+||+.+|++||++.++++
T Consensus 231 ~~~~~li~~~l~~~P~~Rp~~~~l~~ 256 (261)
T cd05068 231 KELYDIMLDCWKEDPDDRPTFETLQW 256 (261)
T ss_pred HHHHHHHHHHhhcCcccCCCHHHHHH
Confidence 99999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a |
| >cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-40 Score=319.92 Aligned_cols=255 Identities=19% Similarity=0.274 Sum_probs=209.6
Q ss_pred cccccccccccccccccCCeEEEEEEEc-------cCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEE
Q 042823 18 YEDVMLHYFFGRMLGRGQFGVSYLCTEN-------STNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFK 90 (477)
Q Consensus 18 ~~~~~~~Y~~~~~iG~G~~g~V~~~~~~-------~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~ 90 (477)
++.-.++|.+.+.||+|+||.||+|.+. ..+..||+|.+.... .......+.+|+.++..+.+||||++++
T Consensus 10 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~i~~~~ 87 (304)
T cd05101 10 WEFSRDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDA--TEKDLSDLVSEMEMMKMIGKHKNIINLL 87 (304)
T ss_pred ccccHHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeeccccc--chHHHHHHHHHHHHHHhhccCCCchhee
Confidence 4556778999999999999999999752 234579999875432 2334567889999999887799999999
Q ss_pred EEEEeCCeEEEEEeccCCCchHHHHHHcC----------------CCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCc
Q 042823 91 STYEDETAVHVVMELCEGGDLFDRIIAKG----------------YNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPEN 154 (477)
Q Consensus 91 ~~~~~~~~~~lv~e~~~gg~L~~~l~~~~----------------~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~N 154 (477)
+++......|+||||+++|+|.+++.+.. .++...+..++.||+.||.|||++|++||||||+|
T Consensus 88 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~givH~dlkp~N 167 (304)
T cd05101 88 GACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQKCIHRDLAARN 167 (304)
T ss_pred EEEecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCCeeecccccce
Confidence 99999999999999999999999997642 36777889999999999999999999999999999
Q ss_pred eeeeecCCCCCEEEeecCCccccCCCcc---eecccccccccchhhhhh-hcCCccchHhHHHHHHHHhh-CCCCCCCCC
Q 042823 155 FSFISRDDNALLKVTDFGSALLFEEGQV---YRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLS-GVPPFWAET 229 (477)
Q Consensus 155 il~~~~~~~~~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~t-g~~pf~~~~ 229 (477)
|++ +.++.+||+|||.+........ .....+++.|+|||++.+ .++.++||||||+++|+|++ |..||.+.+
T Consensus 168 ili---~~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~ 244 (304)
T cd05101 168 VLV---TENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP 244 (304)
T ss_pred EEE---cCCCcEEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCC
Confidence 999 6778899999999876543221 122345678999999864 58899999999999999998 889998887
Q ss_pred hhhHHHHHHcCCccCCCCCCCCCCHHHHHHHHHhcccCccccCCHHHHhcC
Q 042823 230 KKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEH 280 (477)
Q Consensus 230 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h 280 (477)
..+....+..+.... ....++..+++++.+||+.+|++|||+.++++.
T Consensus 245 ~~~~~~~~~~~~~~~---~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~ 292 (304)
T cd05101 245 VEELFKLLKEGHRMD---KPANCTNELYMMMRDCWHAIPSHRPTFKQLVED 292 (304)
T ss_pred HHHHHHHHHcCCcCC---CCCCCCHHHHHHHHHHcccChhhCCCHHHHHHH
Confidence 777777665543221 124678999999999999999999999999863
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-40 Score=313.72 Aligned_cols=248 Identities=21% Similarity=0.284 Sum_probs=203.3
Q ss_pred ccccccccccCCeEEEEEEEcc---CCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCe---
Q 042823 25 YFFGRMLGRGQFGVSYLCTENS---TNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETA--- 98 (477)
Q Consensus 25 Y~~~~~iG~G~~g~V~~~~~~~---~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~--- 98 (477)
|.+.+.||+|+||.||+|.+.. ++..||+|++..... .......+.+|+..++.+ +||||+++++++.....
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~~ 78 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIH-TYSEIEEFLSEAACMKDF-DHPNVMKLIGVCFEASSLQK 78 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcC-CHHHHHHHHHHHHHHHhC-CCCCeeeEEeeeccCCcccc
Confidence 6788999999999999998764 347899999864322 234456788999999998 79999999998865444
Q ss_pred ---EEEEEeccCCCchHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEe
Q 042823 99 ---VHVVMELCEGGDLFDRIIAK------GYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVT 169 (477)
Q Consensus 99 ---~~lv~e~~~gg~L~~~l~~~------~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~ 169 (477)
.++||||+++|+|..++... ..+++..+..++.|++.||.|||+.+++||||||+||++ ++.+.+||+
T Consensus 79 ~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~i~H~dlkp~Nil~---~~~~~~kl~ 155 (273)
T cd05035 79 IPKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRNFIHRDLAARNCML---REDMTVCVA 155 (273)
T ss_pred CcccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchheEEE---CCCCeEEEC
Confidence 79999999999999888542 357999999999999999999999999999999999999 677889999
Q ss_pred ecCCccccCCCcce---ecccccccccchhhhhh-hcCCccchHhHHHHHHHHhh-CCCCCCCCChhhHHHHHHcCCccC
Q 042823 170 DFGSALLFEEGQVY---RDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQGEIDF 244 (477)
Q Consensus 170 Dfg~a~~~~~~~~~---~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~t-g~~pf~~~~~~~~~~~i~~~~~~~ 244 (477)
|||++......... ....++..|+|||.+.+ .++.++|||||||++|+|++ |.+||.+....+....+..+....
T Consensus 156 dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~ 235 (273)
T cd05035 156 DFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENHEIYDYLRHGNRLK 235 (273)
T ss_pred CccceeeccccccccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCC
Confidence 99998765433211 11234667999999864 58899999999999999999 999998877777776666553221
Q ss_pred CCCCCCCCCHHHHHHHHHhcccCccccCCHHHHhcC
Q 042823 245 DTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEH 280 (477)
Q Consensus 245 ~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h 280 (477)
....+++.+.+++.+||+.||++|||+.+++++
T Consensus 236 ---~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~ 268 (273)
T cd05035 236 ---QPEDCLDELYDLMYSCWRADPKDRPTFTKLREV 268 (273)
T ss_pred ---CCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 124678999999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu |
| >cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.8e-41 Score=326.22 Aligned_cols=255 Identities=22% Similarity=0.329 Sum_probs=201.7
Q ss_pred cccccccccccccccccCCeEEEEEEE-----ccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEE
Q 042823 18 YEDVMLHYFFGRMLGRGQFGVSYLCTE-----NSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKST 92 (477)
Q Consensus 18 ~~~~~~~Y~~~~~iG~G~~g~V~~~~~-----~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~ 92 (477)
|+--.++|++++.||+|+||+||+|.+ ..+++.||+|++..... ......+.+|+.++..+.+||||++++++
T Consensus 2 ~~~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~~h~niv~~~~~ 79 (343)
T cd05103 2 WEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGAT--HSEHRALMSELKILIHIGHHLNVVNLLGA 79 (343)
T ss_pred cccchhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCC--hHHHHHHHHHHHHHHhccCCccHhhhcce
Confidence 344567899999999999999999984 35678999999864322 23456688899999999889999999998
Q ss_pred EEe-CCeEEEEEeccCCCchHHHHHHcC----------------------------------------------------
Q 042823 93 YED-ETAVHVVMELCEGGDLFDRIIAKG---------------------------------------------------- 119 (477)
Q Consensus 93 ~~~-~~~~~lv~e~~~gg~L~~~l~~~~---------------------------------------------------- 119 (477)
+.. +..+++|||||++|+|.+++....
T Consensus 80 ~~~~~~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (343)
T cd05103 80 CTKPGGPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLS 159 (343)
T ss_pred eecCCCceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccc
Confidence 864 456899999999999999986531
Q ss_pred ---------------CCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCCCcc--
Q 042823 120 ---------------YNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQV-- 182 (477)
Q Consensus 120 ---------------~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~-- 182 (477)
.++...+..++.||+.||.|||++||+||||||+||++ +.++.+||+|||++........
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~---~~~~~~kl~dfg~~~~~~~~~~~~ 236 (343)
T cd05103 160 DVEEEEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASRKCIHRDLAARNILL---SENNVVKICDFGLARDIYKDPDYV 236 (343)
T ss_pred cchhhhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCccCeEEE---cCCCcEEEEecccccccccCcchh
Confidence 35677788899999999999999999999999999999 6778999999999876432211
Q ss_pred -eecccccccccchhhhhh-hcCCccchHhHHHHHHHHhh-CCCCCCCCChhhHHH-HHHcCCccCCCCCCCCCCHHHHH
Q 042823 183 -YRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYD-AILQGEIDFDTDPWPSISSTAKD 258 (477)
Q Consensus 183 -~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~t-g~~pf~~~~~~~~~~-~i~~~~~~~~~~~~~~~~~~~~~ 258 (477)
.....+++.|+|||++.+ .++.++||||||+++|+|++ |..||.......... .+..+.. ...+ ...++++.+
T Consensus 237 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~ 313 (343)
T cd05103 237 RKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTR-MRAP--DYTTPEMYQ 313 (343)
T ss_pred hcCCCCCCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccHHHHHHHhccCC-CCCC--CCCCHHHHH
Confidence 112345667999998754 58999999999999999997 999997654333333 3333322 1111 246789999
Q ss_pred HHHHhcccCccccCCHHHHhcC
Q 042823 259 LVRRMLTKDPKRRITAAQVLEH 280 (477)
Q Consensus 259 li~~~l~~dp~~R~s~~~~l~h 280 (477)
++..||+.+|++|||+.++++|
T Consensus 314 ~~~~cl~~~p~~Rps~~eil~~ 335 (343)
T cd05103 314 TMLDCWHGEPSQRPTFSELVEH 335 (343)
T ss_pred HHHHHccCChhhCcCHHHHHHH
Confidence 9999999999999999999876
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp |
| >KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-42 Score=336.17 Aligned_cols=246 Identities=28% Similarity=0.450 Sum_probs=199.5
Q ss_pred cccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCC------
Q 042823 24 HYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDET------ 97 (477)
Q Consensus 24 ~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~------ 97 (477)
-|..-+.||+||||.||+++++.||..||||.+.+... ....+..-+|++++++| +|||||+++++-++..
T Consensus 14 ~W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~--~r~~e~~~~EieilkKL-nh~NIVk~f~iee~~~~~~~~~ 90 (732)
T KOG4250|consen 14 LWEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESS--LRPRERWCREIEILKKL-NHPNIVKLFDIEETKFLGLVTR 90 (732)
T ss_pred ceeehhhhcCCccceeeeecccccccchhHHhhhhhcc--cchHHHHHHHHHHHHHc-CchhhhhhcccCCccccCcccc
Confidence 45556889999999999999999999999999976553 34567778999999999 5999999999876544
Q ss_pred eEEEEEeccCCCchHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecC-CCCCEEEeecCC
Q 042823 98 AVHVVMELCEGGDLFDRIIAK---GYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRD-DNALLKVTDFGS 173 (477)
Q Consensus 98 ~~~lv~e~~~gg~L~~~l~~~---~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~-~~~~~kl~Dfg~ 173 (477)
.-.+|||||+||||..++.+. ..+++.++..++..+..||.|||++|||||||||.||++..-. .....||+|||.
T Consensus 91 ~~vlvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~ 170 (732)
T KOG4250|consen 91 LPVLVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRENGIVHRDLKPGNIVLQIGEDGQSIYKLTDFGA 170 (732)
T ss_pred cceEEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEeecCCCceEEeeecccc
Confidence 467999999999999999763 3589999999999999999999999999999999999885433 455689999999
Q ss_pred ccccCCCcceecccccccccchhhhh--hhcCCccchHhHHHHHHHHhhCCCCCCCCChh----hHHHHHHcCCc-----
Q 042823 174 ALLFEEGQVYRDIVGSGFYIAPEVLR--RRYGKEIDIWSAGVILYILLSGVPPFWAETKK----GTYDAILQGEI----- 242 (477)
Q Consensus 174 a~~~~~~~~~~~~~gt~~y~aPE~~~--~~~~~~~DiwslG~il~~l~tg~~pf~~~~~~----~~~~~i~~~~~----- 242 (477)
|+..+++..+.+.+||+.|.+||+.. +.|+..+|.||+||++|++.||..||...... +....+..+..
T Consensus 171 Arel~d~s~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~pk~~~~~~~~~~tkkp~~v~i 250 (732)
T KOG4250|consen 171 ARELDDNSLFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPFGGPKNNKEIMWHIITKKPSGVAI 250 (732)
T ss_pred cccCCCCCeeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCCCccccchhhhhhhccCCCceeE
Confidence 99999999999999999999999997 56899999999999999999999999553222 23323322111
Q ss_pred ----------cCCC--CCCCCCC----HHHHHHHHHhcccCccccC
Q 042823 243 ----------DFDT--DPWPSIS----STAKDLVRRMLTKDPKRRI 272 (477)
Q Consensus 243 ----------~~~~--~~~~~~~----~~~~~li~~~l~~dp~~R~ 272 (477)
.+.. +..-.++ ..+-.++..+|..+|.+|.
T Consensus 251 ~~~~~eNgpv~~s~~lP~p~~Ls~~l~~~~~kwLa~~L~~~~~~~~ 296 (732)
T KOG4250|consen 251 GAQEEENGPVEWSSTLPQPNHLSRGLATRLTKWLASMLEWNPRKRG 296 (732)
T ss_pred eeecccCCceeeeccCCCcccccHHHHhhhhHHHHHHHhhhHHHhC
Confidence 1110 0001223 3355778889999999998
|
|
| >cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-40 Score=316.96 Aligned_cols=247 Identities=22% Similarity=0.336 Sum_probs=205.5
Q ss_pred ccccccccccccCCeEEEEEEEc-----cCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCC
Q 042823 23 LHYFFGRMLGRGQFGVSYLCTEN-----STNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDET 97 (477)
Q Consensus 23 ~~Y~~~~~iG~G~~g~V~~~~~~-----~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~ 97 (477)
.+|.+.+.||+|+||.||+|.+. .++..+++|.+.... ......+.+|+.++.++ +||||+++++++....
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~---~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~ 80 (291)
T cd05094 5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPT---LAARKDFQREAELLTNL-QHEHIVKFYGVCGDGD 80 (291)
T ss_pred HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCcc---HHHHHHHHHHHHHHhcC-CCCCcceEEEEEccCC
Confidence 46889999999999999999853 345668888875322 23346688999999998 7999999999999999
Q ss_pred eEEEEEeccCCCchHHHHHHcC----------------CCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecC
Q 042823 98 AVHVVMELCEGGDLFDRIIAKG----------------YNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRD 161 (477)
Q Consensus 98 ~~~lv~e~~~gg~L~~~l~~~~----------------~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~ 161 (477)
..++||||+++++|.+++...+ .+++..+..++.||+.||.|||++|++||||||+||++ +
T Consensus 81 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nil~---~ 157 (291)
T cd05094 81 PLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLV---G 157 (291)
T ss_pred ceEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEE---c
Confidence 9999999999999999997643 37889999999999999999999999999999999999 6
Q ss_pred CCCCEEEeecCCccccCCCcc---eecccccccccchhhhhh-hcCCccchHhHHHHHHHHhh-CCCCCCCCChhhHHHH
Q 042823 162 DNALLKVTDFGSALLFEEGQV---YRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDA 236 (477)
Q Consensus 162 ~~~~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~t-g~~pf~~~~~~~~~~~ 236 (477)
.++.+||+|||++........ .....+++.|+|||++.+ .++.++|||||||++|+|+| |.+||...........
T Consensus 158 ~~~~~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~ 237 (291)
T cd05094 158 ANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIEC 237 (291)
T ss_pred cCCcEEECCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH
Confidence 778999999999875433221 123456788999998864 57889999999999999999 9999988777777766
Q ss_pred HHcCCccCCCCCCCCCCHHHHHHHHHhcccCccccCCHHHHhc
Q 042823 237 ILQGEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLE 279 (477)
Q Consensus 237 i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~ 279 (477)
+..+..... ...+|..+.+++.+||+.+|++|||+.++++
T Consensus 238 ~~~~~~~~~---~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~ 277 (291)
T cd05094 238 ITQGRVLER---PRVCPKEVYDIMLGCWQREPQQRLNIKEIYK 277 (291)
T ss_pred HhCCCCCCC---CccCCHHHHHHHHHHcccChhhCcCHHHHHH
Confidence 665543322 2356889999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n |
| >cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-40 Score=314.80 Aligned_cols=249 Identities=24% Similarity=0.315 Sum_probs=195.8
Q ss_pred cccc-cccccccccCCeEEEEEE----EccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEe-
Q 042823 22 MLHY-FFGRMLGRGQFGVSYLCT----ENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYED- 95 (477)
Q Consensus 22 ~~~Y-~~~~~iG~G~~g~V~~~~----~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~- 95 (477)
.++| ++.+.||+|+||+||++. ...++..||+|.+..... ......+.+|+.+++.+ +||||+++++++..
T Consensus 2 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~ 78 (283)
T cd05080 2 HKRYLKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECG--QQNTSGWKKEINILKTL-YHENIVKYKGCCSEQ 78 (283)
T ss_pred ChhhceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccC--hHHHHHHHHHHHHHHhC-CCCCEeeEEEEEecC
Confidence 4677 999999999999998865 345688999999865421 23345678899999999 79999999998765
Q ss_pred -CCeEEEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCc
Q 042823 96 -ETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSA 174 (477)
Q Consensus 96 -~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a 174 (477)
...+|+||||+++|+|.+++... .+++.++..++.|++.||.|||++|++||||||+||++ +.++.+||+|||++
T Consensus 79 ~~~~~~lv~e~~~~~~l~~~~~~~-~l~~~~~~~i~~~l~~~l~~lH~~~i~H~dlkp~Nili---~~~~~~~l~dfg~~ 154 (283)
T cd05080 79 GGKGLQLIMEYVPLGSLRDYLPKH-KLNLAQLLLFAQQICEGMAYLHSQHYIHRDLAARNVLL---DNDRLVKIGDFGLA 154 (283)
T ss_pred CCceEEEEecCCCCCCHHHHHHHc-CCCHHHHHHHHHHHHHHHHHHHHCCeeccccChheEEE---cCCCcEEEeecccc
Confidence 34689999999999999988764 58999999999999999999999999999999999999 67788999999998
Q ss_pred cccCCCcc----eecccccccccchhhhh-hhcCCccchHhHHHHHHHHhhCCCCCCCCChhh--H------------HH
Q 042823 175 LLFEEGQV----YRDIVGSGFYIAPEVLR-RRYGKEIDIWSAGVILYILLSGVPPFWAETKKG--T------------YD 235 (477)
Q Consensus 175 ~~~~~~~~----~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~--~------------~~ 235 (477)
........ .....++..|+|||++. ..++.++||||||+++|+|+||..||......- . ..
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (283)
T cd05080 155 KAVPEGHEYYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQGQMTVVRLI 234 (283)
T ss_pred cccCCcchhhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhhhhhcccccccchhhhh
Confidence 76543221 11224566799999986 468899999999999999999999985433210 0 00
Q ss_pred HHHcCCccCCCCCCCCCCHHHHHHHHHhcccCccccCCHHHHhc
Q 042823 236 AILQGEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLE 279 (477)
Q Consensus 236 ~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~ 279 (477)
......... +....++..+.+++.+||+.+|++|||++++++
T Consensus 235 ~~~~~~~~~--~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~ 276 (283)
T cd05080 235 ELLERGMRL--PCPKNCPQEVYILMKNCWETEAKFRPTFRSLIP 276 (283)
T ss_pred hhhhcCCCC--CCCCCCCHHHHHHHHHHhccChhhCCCHHHHHH
Confidence 001111111 112357899999999999999999999999975
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign |
| >KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-42 Score=315.91 Aligned_cols=267 Identities=28% Similarity=0.397 Sum_probs=213.7
Q ss_pred ccccccccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCC-----Cee
Q 042823 13 ILGKAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQP-----NVV 87 (477)
Q Consensus 13 ~~~~~~~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hp-----niv 87 (477)
++-+..+.+..+|.+++.+|+|.||.|-.|.+..++..||+|+++.-.. ..+.-.-|++++.++..+. -+|
T Consensus 79 ~v~~~gD~l~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~k----YreAa~iEi~vLqki~~~DP~g~~rcv 154 (415)
T KOG0671|consen 79 YVYQVGDILTNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVDK----YREAALIEIEVLQKINESDPNGKFRCV 154 (415)
T ss_pred EEEEeccccccceehhhhhcCCcccceEEEeecCCCceehHHHHHHHHH----HhhHHHHHHHHHHHHHhcCCCCceEEE
Confidence 3445667889999999999999999999999999999999999864332 2334455788888874332 488
Q ss_pred EEEEEEEeCCeEEEEEeccCCCchHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecC----
Q 042823 88 EFKSTYEDETAVHVVMELCEGGDLFDRIIAKG--YNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRD---- 161 (477)
Q Consensus 88 ~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~--~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~---- 161 (477)
.+.++|...++.+||+|.+ |-|+++++..+. +++-..++.+.+|++.+++|||+.+++|.||||+|||+.+..
T Consensus 155 ~m~~wFdyrghiCivfell-G~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~kl~HTDLKPENILfvss~~~~~ 233 (415)
T KOG0671|consen 155 QMRDWFDYRGHICIVFELL-GLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDLKLTHTDLKPENILFVSSEYFKT 233 (415)
T ss_pred eeehhhhccCceEEEEecc-ChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhcceeecCCChheEEEeccceEEE
Confidence 8899999999999999998 669999999875 478899999999999999999999999999999999996532
Q ss_pred -------------CCCCEEEeecCCccccCCCcceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCC
Q 042823 162 -------------DNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWA 227 (477)
Q Consensus 162 -------------~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~ 227 (477)
++..||++|||.|+...+.. ...+.|.+|+|||++.+ +++.++||||+||||+|++||...|++
T Consensus 234 ~~~k~~~~~~r~~ks~~I~vIDFGsAtf~~e~h--s~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFqt 311 (415)
T KOG0671|consen 234 YNPKKKVCFIRPLKSTAIKVIDFGSATFDHEHH--STIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQT 311 (415)
T ss_pred eccCCccceeccCCCcceEEEecCCcceeccCc--ceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccceeccc
Confidence 24569999999998765433 56688999999999876 799999999999999999999999988
Q ss_pred CChhh---HHHHHHcC------------------CccCCCCCCC---------------------CCCHHHHHHHHHhcc
Q 042823 228 ETKKG---TYDAILQG------------------EIDFDTDPWP---------------------SISSTAKDLVRRMLT 265 (477)
Q Consensus 228 ~~~~~---~~~~i~~~------------------~~~~~~~~~~---------------------~~~~~~~~li~~~l~ 265 (477)
-.+.+ +.+.|+.. .+.++....+ ....++.+||++||.
T Consensus 312 Hen~EHLaMMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~ 391 (415)
T KOG0671|consen 312 HENLEHLAMMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLE 391 (415)
T ss_pred CCcHHHHHHHHHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHc
Confidence 76555 22333221 1111110000 012357899999999
Q ss_pred cCccccCCHHHHhcCcccCcC
Q 042823 266 KDPKRRITAAQVLEHPWLRES 286 (477)
Q Consensus 266 ~dp~~R~s~~~~l~h~~~~~~ 286 (477)
.||.+|+|+.|+|.||||+..
T Consensus 392 fDP~~RiTl~EAL~HpFF~~~ 412 (415)
T KOG0671|consen 392 FDPARRITLREALSHPFFARL 412 (415)
T ss_pred cCccccccHHHHhcCHHhhcC
Confidence 999999999999999999764
|
|
| >cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-40 Score=314.80 Aligned_cols=248 Identities=19% Similarity=0.303 Sum_probs=205.7
Q ss_pred cccccccccccccCCeEEEEEEEc-----cCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeC
Q 042823 22 MLHYFFGRMLGRGQFGVSYLCTEN-----STNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDE 96 (477)
Q Consensus 22 ~~~Y~~~~~iG~G~~g~V~~~~~~-----~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~ 96 (477)
..+|++.+.||+|+||.||+|... .++..+|+|.+... .......+.+|++++..+ +||||+++++++...
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~ 79 (280)
T cd05092 4 RRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEA---SESARQDFQREAELLTVL-QHQHIVRFYGVCTEG 79 (280)
T ss_pred hHhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcC---CHHHHHHHHHHHHHHhcC-CCCCCceEEEEEecC
Confidence 346888999999999999999643 35668899987543 234456788999999999 799999999999999
Q ss_pred CeEEEEEeccCCCchHHHHHHcC---------------CCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecC
Q 042823 97 TAVHVVMELCEGGDLFDRIIAKG---------------YNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRD 161 (477)
Q Consensus 97 ~~~~lv~e~~~gg~L~~~l~~~~---------------~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~ 161 (477)
...++||||+++|+|.+++...+ .+++..+..++.|++.||.|||++|++||||||+||++ +
T Consensus 80 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~nil~---~ 156 (280)
T cd05092 80 RPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLHFVHRDLATRNCLV---G 156 (280)
T ss_pred CceEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCCeecccccHhhEEE---c
Confidence 99999999999999999997643 47889999999999999999999999999999999999 6
Q ss_pred CCCCEEEeecCCccccCCCcc---eecccccccccchhhhhh-hcCCccchHhHHHHHHHHhh-CCCCCCCCChhhHHHH
Q 042823 162 DNALLKVTDFGSALLFEEGQV---YRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDA 236 (477)
Q Consensus 162 ~~~~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~t-g~~pf~~~~~~~~~~~ 236 (477)
+.+.+||+|||++........ .....+++.|+|||.+.+ .++.++|||||||++|+|++ |.+||...........
T Consensus 157 ~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~ 236 (280)
T cd05092 157 QGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTEAIEC 236 (280)
T ss_pred CCCCEEECCCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHHHHHHH
Confidence 778899999999875433221 122345678999998864 58999999999999999998 9999987777766666
Q ss_pred HHcCCccCCCCCCCCCCHHHHHHHHHhcccCccccCCHHHHhc
Q 042823 237 ILQGEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLE 279 (477)
Q Consensus 237 i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~ 279 (477)
+..+.... ....+++.+.++|.+||+.||.+||++.++++
T Consensus 237 ~~~~~~~~---~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~ 276 (280)
T cd05092 237 ITQGRELE---RPRTCPPEVYAIMQGCWQREPQQRMVIKDIHS 276 (280)
T ss_pred HHcCccCC---CCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence 66553321 12467899999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory |
| >cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-40 Score=313.83 Aligned_cols=247 Identities=21% Similarity=0.272 Sum_probs=202.4
Q ss_pred ccccccccccccCCeEEEEEEEccCCc----eEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCe
Q 042823 23 LHYFFGRMLGRGQFGVSYLCTENSTNR----PYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETA 98 (477)
Q Consensus 23 ~~Y~~~~~iG~G~~g~V~~~~~~~~~~----~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~ 98 (477)
.+|++.+.||+|+||+||+|.+..++. .||+|++.... .......+.+|+.++..+ +||||+++++++... .
T Consensus 7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~~-~ 82 (279)
T cd05109 7 TELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENT--SPKANKEILDEAYVMAGV-GSPYVCRLLGICLTS-T 82 (279)
T ss_pred hheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCC--CHHHHHHHHHHHHHHHhc-CCCCCceEEEEEcCC-C
Confidence 478899999999999999999877776 47999875432 233456788899998888 799999999998754 5
Q ss_pred EEEEEeccCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCcccc
Q 042823 99 VHVVMELCEGGDLFDRIIAK-GYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLF 177 (477)
Q Consensus 99 ~~lv~e~~~gg~L~~~l~~~-~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~ 177 (477)
.++++||+++|+|.+++... +.+++..+..++.|++.||.|||++|++||||||+||++ ..++.+||+|||++...
T Consensus 83 ~~l~~~~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~iiH~dlkp~Nil~---~~~~~~kL~dfG~~~~~ 159 (279)
T cd05109 83 VQLVTQLMPYGCLLDYVRENKDRIGSQDLLNWCVQIAKGMSYLEEVRLVHRDLAARNVLV---KSPNHVKITDFGLARLL 159 (279)
T ss_pred cEEEEEcCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEE---cCCCcEEECCCCceeec
Confidence 78999999999999999774 568999999999999999999999999999999999999 66778999999998766
Q ss_pred CCCcce---ecccccccccchhhhh-hhcCCccchHhHHHHHHHHhh-CCCCCCCCChhhHHHHHHcCCccCCCCCCCCC
Q 042823 178 EEGQVY---RDIVGSGFYIAPEVLR-RRYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQGEIDFDTDPWPSI 252 (477)
Q Consensus 178 ~~~~~~---~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~l~t-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 252 (477)
...... ....+++.|+|||.+. ..++.++|||||||++|+|++ |.+||...........+..+... +..+.+
T Consensus 160 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~---~~~~~~ 236 (279)
T cd05109 160 DIDETEYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDLLEKGERL---PQPPIC 236 (279)
T ss_pred ccccceeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCcC---CCCccC
Confidence 432221 1223467899999986 458899999999999999998 99999776665555544443221 123467
Q ss_pred CHHHHHHHHHhcccCccccCCHHHHhc
Q 042823 253 SSTAKDLVRRMLTKDPKRRITAAQVLE 279 (477)
Q Consensus 253 ~~~~~~li~~~l~~dp~~R~s~~~~l~ 279 (477)
+..+.+++.+||..||++||++.++++
T Consensus 237 ~~~~~~li~~~l~~dp~~Rp~~~~l~~ 263 (279)
T cd05109 237 TIDVYMIMVKCWMIDSECRPRFRELVD 263 (279)
T ss_pred CHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 899999999999999999999999984
|
Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve |
| >cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-40 Score=313.55 Aligned_cols=248 Identities=22% Similarity=0.290 Sum_probs=201.8
Q ss_pred ccccccccccCCeEEEEEEEccCCc--eEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEe------C
Q 042823 25 YFFGRMLGRGQFGVSYLCTENSTNR--PYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYED------E 96 (477)
Q Consensus 25 Y~~~~~iG~G~~g~V~~~~~~~~~~--~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~------~ 96 (477)
|.+++.||+|+||.||+|.+..++. .+|+|.+.... ........+.+|+.++..+ +||||+++++++.. .
T Consensus 1 ~~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~~ 78 (272)
T cd05075 1 LALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAI-CTRSEMEDFLSEAVCMKEF-DHPNVMRLIGVCLQTVESEGY 78 (272)
T ss_pred CccccccCcccCceEEEeEEccCCCeeeEEEEecccCc-CCHHHHHHHHHHHHHHHhC-CCCCcceEEEEEccCCcccCC
Confidence 4578999999999999999877765 68999876542 2334456788899999998 79999999997642 2
Q ss_pred CeEEEEEeccCCCchHHHHHH------cCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEee
Q 042823 97 TAVHVVMELCEGGDLFDRIIA------KGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTD 170 (477)
Q Consensus 97 ~~~~lv~e~~~gg~L~~~l~~------~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~D 170 (477)
...++||||+++|+|.+++.. ...+++..+..++.|++.||.|||++||+||||||+||++ +.++.+||+|
T Consensus 79 ~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~---~~~~~~kl~D 155 (272)
T cd05075 79 PSPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKSFIHRDLAARNCML---NENMNVCVAD 155 (272)
T ss_pred CCcEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhheEE---cCCCCEEECC
Confidence 357899999999999988753 2347899999999999999999999999999999999999 6788899999
Q ss_pred cCCccccCCCcce---ecccccccccchhhhhh-hcCCccchHhHHHHHHHHhh-CCCCCCCCChhhHHHHHHcCCccCC
Q 042823 171 FGSALLFEEGQVY---RDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQGEIDFD 245 (477)
Q Consensus 171 fg~a~~~~~~~~~---~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~t-g~~pf~~~~~~~~~~~i~~~~~~~~ 245 (477)
||++......... ....+++.|+|||...+ .++.++|||||||++|+|++ |.+||.+.........+..+....
T Consensus 156 fg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~- 234 (272)
T cd05075 156 FGLSKKIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENSEIYDYLRQGNRLK- 234 (272)
T ss_pred CCcccccCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCCCC-
Confidence 9998865433221 12245678999999864 58999999999999999999 899998877777666666654321
Q ss_pred CCCCCCCCHHHHHHHHHhcccCccccCCHHHHhcC
Q 042823 246 TDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEH 280 (477)
Q Consensus 246 ~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h 280 (477)
..+.++..+.++|.+||+.||++|||+.+++++
T Consensus 235 --~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~ 267 (272)
T cd05075 235 --QPPDCLDGLYSLMSSCWLLNPKDRPSFETLRCE 267 (272)
T ss_pred --CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 224678999999999999999999999999763
|
Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor |
| >cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-40 Score=322.17 Aligned_cols=261 Identities=28% Similarity=0.441 Sum_probs=209.5
Q ss_pred ccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEe-CC
Q 042823 19 EDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYED-ET 97 (477)
Q Consensus 19 ~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~-~~ 97 (477)
..+.++|++.+.||.|+||.||+|.++.+++.||+|++.+... .......+.+|+.++..+ +||||++++++|.. ..
T Consensus 6 ~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~ 83 (328)
T cd07856 6 FEITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFS-TPVLAKRTYRELKLLKHL-RHENIISLSDIFISPLE 83 (328)
T ss_pred eccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEeccccc-ccchhHHHHHHHHHHHhc-CCCCeeeEeeeEecCCC
Confidence 3467899999999999999999999999999999998865322 223345677899999999 79999999999875 56
Q ss_pred eEEEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCcccc
Q 042823 98 AVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLF 177 (477)
Q Consensus 98 ~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~ 177 (477)
..|+|+||+ +++|.+++.. ..+++..+..++.|+++||.|||++|++||||+|+||++ +..+.+||+|||.+...
T Consensus 84 ~~~lv~e~~-~~~L~~~~~~-~~~~~~~~~~~~~ql~~aL~~LH~~~iiH~dl~p~Nili---~~~~~~~l~dfg~~~~~ 158 (328)
T cd07856 84 DIYFVTELL-GTDLHRLLTS-RPLEKQFIQYFLYQILRGLKYVHSAGVVHRDLKPSNILI---NENCDLKICDFGLARIQ 158 (328)
T ss_pred cEEEEeehh-ccCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEeE---CCCCCEEeCcccccccc
Confidence 789999999 5588777654 457888899999999999999999999999999999999 67888999999998754
Q ss_pred CCCcceecccccccccchhhhhh--hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcC---------------
Q 042823 178 EEGQVYRDIVGSGFYIAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQG--------------- 240 (477)
Q Consensus 178 ~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~--------------- 240 (477)
... .....+++.|+|||.+.+ .++.++||||+||++|+|++|.+||...........+.+.
T Consensus 159 ~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (328)
T cd07856 159 DPQ--MTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINTICSE 236 (328)
T ss_pred CCC--cCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhccch
Confidence 332 234567889999998754 5889999999999999999999999766543222111110
Q ss_pred ---------C--ccCC-CCCCCCCCHHHHHHHHHhcccCccccCCHHHHhcCcccCcCCC
Q 042823 241 ---------E--IDFD-TDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGE 288 (477)
Q Consensus 241 ---------~--~~~~-~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~~~ 288 (477)
. ...+ ....+.+++.+.++|.+||+.+|++|||+.+++.||||.....
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~~~~~~~~~ 296 (328)
T cd07856 237 NTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAHPYLAPYHD 296 (328)
T ss_pred hhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcCCccccccC
Confidence 0 0000 0112457889999999999999999999999999999976543
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U |
| >cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-40 Score=310.47 Aligned_cols=248 Identities=23% Similarity=0.296 Sum_probs=204.4
Q ss_pred ccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCe
Q 042823 19 EDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETA 98 (477)
Q Consensus 19 ~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~ 98 (477)
+...++|++.+.||+|+||.||+|.+. .+..+|+|.+..... ....+.+|+.+++++ +|||++++++++. ...
T Consensus 2 ~~~~~~~~~~~~ig~g~~~~v~~~~~~-~~~~~~~k~~~~~~~----~~~~~~~E~~~l~~l-~~~~i~~~~~~~~-~~~ 74 (260)
T cd05070 2 EIPRESLQLIKKLGNGQFGEVWMGTWN-GNTKVAVKTLKPGTM----SPESFLEEAQIMKKL-RHDKLVQLYAVVS-EEP 74 (260)
T ss_pred CCchHHhhhhheeccccCceEEEEEec-CCceeEEEEecCCCC----CHHHHHHHHHHHHhc-CCCceEEEEeEEC-CCC
Confidence 456789999999999999999999875 566799998865322 234688999999999 7999999999885 456
Q ss_pred EEEEEeccCCCchHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccc
Q 042823 99 VHVVMELCEGGDLFDRIIAK--GYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALL 176 (477)
Q Consensus 99 ~~lv~e~~~gg~L~~~l~~~--~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~ 176 (477)
.|+||||+++++|.+++... ..+++..+..++.|++.||.|||++|++||||||+||++ +.++.++|+|||.+..
T Consensus 75 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~Nili---~~~~~~~l~dfg~~~~ 151 (260)
T cd05070 75 IYIVTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILV---GDGLVCKIADFGLARL 151 (260)
T ss_pred cEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEE---eCCceEEeCCceeeee
Confidence 88999999999999998763 357999999999999999999999999999999999999 6678899999999876
Q ss_pred cCCCcc--eecccccccccchhhhh-hhcCCccchHhHHHHHHHHhh-CCCCCCCCChhhHHHHHHcCCccCCCCCCCCC
Q 042823 177 FEEGQV--YRDIVGSGFYIAPEVLR-RRYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQGEIDFDTDPWPSI 252 (477)
Q Consensus 177 ~~~~~~--~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~l~t-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 252 (477)
...... .....++..|+|||.+. ..++.++||||||+++|+|++ |.+||.+....+....+..+.. . +.....
T Consensus 152 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~-~--~~~~~~ 228 (260)
T cd05070 152 IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERGYR-M--PCPQDC 228 (260)
T ss_pred ccCcccccccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCC-C--CCCCcC
Confidence 543221 12234556799999876 458899999999999999999 9999988777666666654321 1 122457
Q ss_pred CHHHHHHHHHhcccCccccCCHHHHhc
Q 042823 253 SSTAKDLVRRMLTKDPKRRITAAQVLE 279 (477)
Q Consensus 253 ~~~~~~li~~~l~~dp~~R~s~~~~l~ 279 (477)
+..+.+++.+||..+|++|||+.++++
T Consensus 229 ~~~~~~li~~~l~~~p~~Rpt~~~l~~ 255 (260)
T cd05070 229 PISLHELMLQCWKKDPEERPTFEYLQS 255 (260)
T ss_pred CHHHHHHHHHHcccCcccCcCHHHHHH
Confidence 899999999999999999999998863
|
Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r |
| >cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-40 Score=312.08 Aligned_cols=248 Identities=22% Similarity=0.349 Sum_probs=206.4
Q ss_pred ccccccccccccCCeEEEEEEEccCCc---eEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeE
Q 042823 23 LHYFFGRMLGRGQFGVSYLCTENSTNR---PYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAV 99 (477)
Q Consensus 23 ~~Y~~~~~iG~G~~g~V~~~~~~~~~~---~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~ 99 (477)
.+|++.+.||+|+||.||+|.++.++. .+|+|.+.... .......+.+|+.++..+ +||||+++++++..++..
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~ 80 (267)
T cd05066 4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGY--TEKQRRDFLSEASIMGQF-DHPNIIHLEGVVTKSKPV 80 (267)
T ss_pred HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCC--CHHHHHHHHHHHHHHHhC-CCCCcceEEEEEecCCcc
Confidence 579999999999999999999865543 69999886432 223456788899999999 799999999999999999
Q ss_pred EEEEeccCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccC
Q 042823 100 HVVMELCEGGDLFDRIIAK-GYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFE 178 (477)
Q Consensus 100 ~lv~e~~~gg~L~~~l~~~-~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~ 178 (477)
|+||||++|++|.+++... +.++..++..++.|++.||.|||++|++||||||+||++ +.++.++|+|||++....
T Consensus 81 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlkp~nili---~~~~~~~l~dfg~~~~~~ 157 (267)
T cd05066 81 MIVTEYMENGSLDAFLRKHDGQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILV---NSNLVCKVSDFGLSRVLE 157 (267)
T ss_pred EEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEeehhhchhcEEE---CCCCeEEeCCCCcccccc
Confidence 9999999999999999775 467999999999999999999999999999999999999 677889999999987654
Q ss_pred CCcce----ecccccccccchhhhhh-hcCCccchHhHHHHHHHHhh-CCCCCCCCChhhHHHHHHcCCccCCCCCCCCC
Q 042823 179 EGQVY----RDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQGEIDFDTDPWPSI 252 (477)
Q Consensus 179 ~~~~~----~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~t-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 252 (477)
..... ....++..|+|||.+.+ .++.++|+|||||++|++++ |..||......+....+..+. .. +....+
T Consensus 158 ~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~~-~~--~~~~~~ 234 (267)
T cd05066 158 DDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQDVIKAIEEGY-RL--PAPMDC 234 (267)
T ss_pred cccceeeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHHHHHHHHhCCC-cC--CCCCCC
Confidence 33211 11223567999999874 68999999999999999886 999998877766666666542 21 222467
Q ss_pred CHHHHHHHHHhcccCccccCCHHHHhc
Q 042823 253 SSTAKDLVRRMLTKDPKRRITAAQVLE 279 (477)
Q Consensus 253 ~~~~~~li~~~l~~dp~~R~s~~~~l~ 279 (477)
++.+.+++.+||+.+|.+||++.++++
T Consensus 235 ~~~~~~li~~~l~~~p~~Rp~~~~i~~ 261 (267)
T cd05066 235 PAALHQLMLDCWQKDRNERPKFEQIVS 261 (267)
T ss_pred CHHHHHHHHHHcccCchhCCCHHHHHH
Confidence 899999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul |
| >cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.2e-41 Score=317.91 Aligned_cols=253 Identities=30% Similarity=0.483 Sum_probs=209.7
Q ss_pred ccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEe
Q 042823 25 YFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVVME 104 (477)
Q Consensus 25 Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~lv~e 104 (477)
|++.+.||+|++|.||+|.+..+++.||+|++..... .......+.+|+.+++.+ +||||+++++++.+...+|+|||
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~~~~~~~v~e 78 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNE-EEGIPSTALREISLLKEL-KHPNIVKLLDVIHTERKLYLVFE 78 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEeccccc-cccccHHHHHHHHHHHhc-CCCCHHHHHhhhhcCCceEEEec
Confidence 6778999999999999999999999999999876531 222345667899999998 69999999999999999999999
Q ss_pred ccCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCCCc-c
Q 042823 105 LCEGGDLFDRIIAK-GYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQ-V 182 (477)
Q Consensus 105 ~~~gg~L~~~l~~~-~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~-~ 182 (477)
|+++ +|.+++.+. ..+++..+..++.|++.||.|||++|++||||+|+||++ +.++.+||+|||.+....... .
T Consensus 79 ~~~~-~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~~l~~~ni~~---~~~~~~~l~d~g~~~~~~~~~~~ 154 (282)
T cd07829 79 YCDM-DLKKYLDKRPGPLSPNLIKSIMYQLLRGLAYCHSHRILHRDLKPQNILI---NRDGVLKLADFGLARAFGIPLRT 154 (282)
T ss_pred CcCc-CHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChheEEE---cCCCCEEEecCCcccccCCCccc
Confidence 9975 999999876 578999999999999999999999999999999999999 678899999999987654332 2
Q ss_pred eecccccccccchhhhhh--hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCc------------------
Q 042823 183 YRDIVGSGFYIAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEI------------------ 242 (477)
Q Consensus 183 ~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~------------------ 242 (477)
.....++..|+|||.+.+ .++.++|||||||++|+|++|.+||...+..+.+..+.+...
T Consensus 155 ~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (282)
T cd07829 155 YTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVTKLPDYKP 234 (282)
T ss_pred cCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCcHHHHHhhcccccccc
Confidence 233456788999999853 578899999999999999999999987765555444332100
Q ss_pred cCC-------CCCCCCCCHHHHHHHHHhcccCccccCCHHHHhcCccc
Q 042823 243 DFD-------TDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWL 283 (477)
Q Consensus 243 ~~~-------~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~ 283 (477)
.++ ...++.++..+.++|.+||..+|++||++.++++||||
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~p~~ 282 (282)
T cd07829 235 TFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALKHPYF 282 (282)
T ss_pred cccccCccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhhCcCC
Confidence 000 01234568899999999999999999999999999997
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the |
| >cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-40 Score=321.67 Aligned_cols=256 Identities=21% Similarity=0.317 Sum_probs=200.2
Q ss_pred ccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEe
Q 042823 25 YFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVVME 104 (477)
Q Consensus 25 Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~lv~e 104 (477)
|.+++.+|.| |.||.+.++.+++.||+|++.... ........+.+|+.++..+ +||||+++++++......|++||
T Consensus 4 ~~i~~~~~~~--~~v~~~~~~~~~~~~avK~~~~~~-~~~~~~~~~~~Ei~~l~~l-~h~~i~~~~~~~~~~~~~~~~~e 79 (314)
T cd08216 4 TLIGKCFEDL--MIVHLAKHKPTNTLVAVKKINLDS-CSKEDLKLLQQEIITSRQL-QHPNILPYVTSFIVDSELYVVSP 79 (314)
T ss_pred hhhhHhhcCC--ceEEEEEecCCCCEEEEEEEeccc-cchhHHHHHHHHHHHHHhc-CCcchhhhhheeecCCeEEEEEe
Confidence 3445555555 556666666799999999987542 2334567899999999999 69999999999999999999999
Q ss_pred ccCCCchHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCCCc-
Q 042823 105 LCEGGDLFDRIIAK--GYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQ- 181 (477)
Q Consensus 105 ~~~gg~L~~~l~~~--~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~- 181 (477)
|+++|+|.+++... ..+++..+..++.|++.||.|||+++|+||||||+||++ +.++.+||+|||.+.......
T Consensus 80 ~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~ivH~dlk~~Nili---~~~~~~kl~d~~~~~~~~~~~~ 156 (314)
T cd08216 80 LMAYGSCEDLLKTHFPEGLPELAIAFILKDVLNALDYIHSKGFIHRSVKASHILL---SGDGKVVLSGLRYSVSMIKHGK 156 (314)
T ss_pred ccCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCcceEEE---ecCCceEEecCccceeeccccc
Confidence 99999999998763 458899999999999999999999999999999999999 667889999999876442211
Q ss_pred -------ceecccccccccchhhhhh---hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccC-------
Q 042823 182 -------VYRDIVGSGFYIAPEVLRR---RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDF------- 244 (477)
Q Consensus 182 -------~~~~~~gt~~y~aPE~~~~---~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~------- 244 (477)
......++..|+|||++.. .++.++||||+||++|+|++|..||..............+....
T Consensus 157 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (314)
T cd08216 157 RQRVVHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQMLLEKVRGTVPCLLDKSTY 236 (314)
T ss_pred cccccccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCccccccCch
Confidence 1123456778999999864 47899999999999999999999998765444332222211100
Q ss_pred -----------------------CCCCCCCCCHHHHHHHHHhcccCccccCCHHHHhcCcccCcCC
Q 042823 245 -----------------------DTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESG 287 (477)
Q Consensus 245 -----------------------~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~~ 287 (477)
.......++.++.+|+.+||+.||++|||+.++|+||||+...
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~p~~~~~~ 302 (314)
T cd08216 237 PLYEDSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNHSFFKQCK 302 (314)
T ss_pred hhhcCCcCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcCchHhhhc
Confidence 0000012356889999999999999999999999999998654
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc |
| >cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-40 Score=308.60 Aligned_cols=241 Identities=21% Similarity=0.270 Sum_probs=199.7
Q ss_pred ccccccCCeEEEEEEEccCC---ceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEec
Q 042823 29 RMLGRGQFGVSYLCTENSTN---RPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVVMEL 105 (477)
Q Consensus 29 ~~iG~G~~g~V~~~~~~~~~---~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~lv~e~ 105 (477)
+.||+|+||.||+|.+..++ ..+|+|.+...... .....+.+|+.++..+ +||||+++++++. ...+++||||
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~--~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~-~~~~~~v~e~ 76 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIA--AGKKEFLREASVMAQL-DHPCIVRLIGVCK-GEPLMLVMEL 76 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccch--HHHHHHHHHHHHHHhc-CCCCeeeEEEEEc-CCceEEEEEe
Confidence 46999999999999876554 78999988654332 3456788899999998 7999999999876 4468999999
Q ss_pred cCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCCCcce-e
Q 042823 106 CEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVY-R 184 (477)
Q Consensus 106 ~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~-~ 184 (477)
+++|+|.+++...+.+++..+..++.|++.||.|||..+++||||||+||++ +.++.+||+|||.+......... .
T Consensus 77 ~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~nili---~~~~~~kl~df~~~~~~~~~~~~~~ 153 (257)
T cd05060 77 APLGPLLKYLKKRREIPVSDLKELAHQVAMGMAYLESKHFVHRDLAARNVLL---VNRHQAKISDFGMSRALGAGSDYYR 153 (257)
T ss_pred CCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCeeccCcccceEEE---cCCCcEEeccccccceeecCCcccc
Confidence 9999999999988889999999999999999999999999999999999999 67788999999998765433221 1
Q ss_pred ---cccccccccchhhhhh-hcCCccchHhHHHHHHHHhh-CCCCCCCCChhhHHHHHHcCCccCCCCCCCCCCHHHHHH
Q 042823 185 ---DIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDL 259 (477)
Q Consensus 185 ---~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~t-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l 259 (477)
...++..|+|||.+.+ .++.++|||||||++|+|++ |.+||......+....+...... .....++..++++
T Consensus 154 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~l 230 (257)
T cd05060 154 ATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGAEVIAMLESGERL---PRPEECPQEIYSI 230 (257)
T ss_pred cccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcCCcC---CCCCCCCHHHHHH
Confidence 1123457999999864 58899999999999999998 99999877766666666554321 2224678999999
Q ss_pred HHHhcccCccccCCHHHHhc
Q 042823 260 VRRMLTKDPKRRITAAQVLE 279 (477)
Q Consensus 260 i~~~l~~dp~~R~s~~~~l~ 279 (477)
|.+||..+|++|||+.++++
T Consensus 231 i~~cl~~~p~~Rp~~~~l~~ 250 (257)
T cd05060 231 MLSCWKYRPEDRPTFSELES 250 (257)
T ss_pred HHHHhcCChhhCcCHHHHHH
Confidence 99999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi |
| >cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-40 Score=327.92 Aligned_cols=257 Identities=21% Similarity=0.289 Sum_probs=206.3
Q ss_pred ccccccccccccccccccCCeEEEEEEEc-----cCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEE
Q 042823 17 AYEDVMLHYFFGRMLGRGQFGVSYLCTEN-----STNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKS 91 (477)
Q Consensus 17 ~~~~~~~~Y~~~~~iG~G~~g~V~~~~~~-----~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~ 91 (477)
.++.-.++|.+.+.||+|+||.||+|++. .+++.||+|++..... ......+.+|+.++.++..||||+++++
T Consensus 31 ~~~~~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~--~~~~~~~~~E~~~l~~l~~H~niv~~~~ 108 (401)
T cd05107 31 AWEMPRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTAR--SSEKQALMSELKIMSHLGPHLNIVNLLG 108 (401)
T ss_pred cceecHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCC--hhHHHHHHHHHHHHHhcCCCCCeEEEEE
Confidence 35556678999999999999999999864 3456899999965322 2234567899999999955999999999
Q ss_pred EEEeCCeEEEEEeccCCCchHHHHHHcC----------------------------------------------------
Q 042823 92 TYEDETAVHVVMELCEGGDLFDRIIAKG---------------------------------------------------- 119 (477)
Q Consensus 92 ~~~~~~~~~lv~e~~~gg~L~~~l~~~~---------------------------------------------------- 119 (477)
++......|+|||||++|+|.+++...+
T Consensus 109 ~~~~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (401)
T cd05107 109 ACTKGGPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESAD 188 (401)
T ss_pred EEccCCCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccC
Confidence 9999999999999999999999996532
Q ss_pred ----------------------------------------------CCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCC
Q 042823 120 ----------------------------------------------YNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPE 153 (477)
Q Consensus 120 ----------------------------------------------~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~ 153 (477)
.++...+..++.||+.||.|||+.+++||||||+
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrdlkp~ 268 (401)
T cd05107 189 YVPMQDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASKNCVHRDLAAR 268 (401)
T ss_pred ccchhcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCcCcccCCcc
Confidence 2456677889999999999999999999999999
Q ss_pred ceeeeecCCCCCEEEeecCCccccCCCc---ceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhh-CCCCCCCC
Q 042823 154 NFSFISRDDNALLKVTDFGSALLFEEGQ---VYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLS-GVPPFWAE 228 (477)
Q Consensus 154 Nil~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~t-g~~pf~~~ 228 (477)
||++ +..+.+||+|||++....... ......+++.|+|||.+.+ .++.++|||||||++|+|++ |..||...
T Consensus 269 NiLl---~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~ 345 (401)
T cd05107 269 NVLI---CEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPEL 345 (401)
T ss_pred eEEE---eCCCEEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCC
Confidence 9999 567889999999987643221 1123456788999999864 57899999999999999998 89999765
Q ss_pred ChhhHHHHHHcCCccCCCCCCCCCCHHHHHHHHHhcccCccccCCHHHHhcC
Q 042823 229 TKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEH 280 (477)
Q Consensus 229 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h 280 (477)
...+............. ..+.++.++.+++.+||..+|.+||++.++++.
T Consensus 346 ~~~~~~~~~~~~~~~~~--~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~ 395 (401)
T cd05107 346 PMNEQFYNAIKRGYRMA--KPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHL 395 (401)
T ss_pred CchHHHHHHHHcCCCCC--CCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence 55554444333322221 224578999999999999999999999999863
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D |
| >cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.9e-41 Score=313.58 Aligned_cols=252 Identities=28% Similarity=0.473 Sum_probs=207.3
Q ss_pred cccccccccccCCeEEEEEEEccCCceEEEEEeecCCc--cchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEE
Q 042823 24 HYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPK--MRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHV 101 (477)
Q Consensus 24 ~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~l 101 (477)
+|.+.+.||+|+||.||+|.+..++..+++|++..... ..........+|+.+++.+ +||||+++++++.+....++
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~l 79 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKL-DHPAIVKFHASFLERDAFCI 79 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhC-CCCcHHHHHHHHhcCCceEE
Confidence 68999999999999999999988877777777653221 1222344566788888888 79999999999999999999
Q ss_pred EEeccCCCchHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCcccc
Q 042823 102 VMELCEGGDLFDRIIA----KGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLF 177 (477)
Q Consensus 102 v~e~~~gg~L~~~l~~----~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~ 177 (477)
||||+++++|.+++.. ...+++.++..++.|++.||.|||++|++|+||+|+||++ + .+.+||+|||.+...
T Consensus 80 v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~~l~~~nili---~-~~~~~l~d~g~~~~~ 155 (260)
T cd08222 80 ITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRRILHRDLKAKNIFL---K-NNLLKIGDFGVSRLL 155 (260)
T ss_pred EEEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCChhheEe---e-cCCEeecccCceeec
Confidence 9999999999888754 3568999999999999999999999999999999999988 2 356999999988765
Q ss_pred CCCc-ceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCCCCHH
Q 042823 178 EEGQ-VYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISST 255 (477)
Q Consensus 178 ~~~~-~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 255 (477)
.... ......|++.|+|||.+.+ .++.++|+||+|+++|+|++|..||...........+..+.... ....++.+
T Consensus 156 ~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ 232 (260)
T cd08222 156 MGSCDLATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNFLSVVLRIVEGPTPS---LPETYSRQ 232 (260)
T ss_pred CCCcccccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHcCCCCC---CcchhcHH
Confidence 4332 2334568899999998864 57889999999999999999999997766655555555443221 12357889
Q ss_pred HHHHHHHhcccCccccCCHHHHhcCccc
Q 042823 256 AKDLVRRMLTKDPKRRITAAQVLEHPWL 283 (477)
Q Consensus 256 ~~~li~~~l~~dp~~R~s~~~~l~h~~~ 283 (477)
+.++|.+||..+|++||++.++++||||
T Consensus 233 ~~~li~~~l~~~p~~Rp~~~~il~~~~~ 260 (260)
T cd08222 233 LNSIMQSMLNKDPSLRPSAAEILRNPFI 260 (260)
T ss_pred HHHHHHHHhcCChhhCcCHHHHhhCCCC
Confidence 9999999999999999999999999997
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check |
| >cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-40 Score=321.51 Aligned_cols=257 Identities=19% Similarity=0.295 Sum_probs=208.8
Q ss_pred cccccccccccccccccccCCeEEEEEEEccC-------CceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeE
Q 042823 16 KAYEDVMLHYFFGRMLGRGQFGVSYLCTENST-------NRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVE 88 (477)
Q Consensus 16 ~~~~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~-------~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~ 88 (477)
..++....+|++++.||+|+||.||+|.+... +..||+|.+.... .......+.+|+.++.++.+||||++
T Consensus 5 ~~~~~~~~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~iv~ 82 (334)
T cd05100 5 PKWELSRTRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDA--TDKDLSDLVSEMEMMKMIGKHKNIIN 82 (334)
T ss_pred cccccCHhHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEccccc--CHHHHHHHHHHHHHHHhhcCCCCeee
Confidence 34455556899999999999999999986432 2368999875432 22345678899999999977999999
Q ss_pred EEEEEEeCCeEEEEEeccCCCchHHHHHHcC----------------CCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCC
Q 042823 89 FKSTYEDETAVHVVMELCEGGDLFDRIIAKG----------------YNSERDAATVLRAIVNAVNVCHSMGVMHRDLKP 152 (477)
Q Consensus 89 ~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~----------------~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp 152 (477)
+++++......|+||||+++|+|.+++.+.. .++..++..++.|++.||.|||++|++||||||
T Consensus 83 ~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~givH~dlkp 162 (334)
T cd05100 83 LLGACTQDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQKCIHRDLAA 162 (334)
T ss_pred eeEEEccCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCeecccccc
Confidence 9999999999999999999999999997632 356778889999999999999999999999999
Q ss_pred CceeeeecCCCCCEEEeecCCccccCCCcce---ecccccccccchhhhhh-hcCCccchHhHHHHHHHHhh-CCCCCCC
Q 042823 153 ENFSFISRDDNALLKVTDFGSALLFEEGQVY---RDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLS-GVPPFWA 227 (477)
Q Consensus 153 ~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~---~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~t-g~~pf~~ 227 (477)
+||++ +.++.+||+|||++......... ....++..|+|||++.+ .++.++|||||||++|+|++ |.+||.+
T Consensus 163 ~Nill---~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~ 239 (334)
T cd05100 163 RNVLV---TEDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPG 239 (334)
T ss_pred ceEEE---cCCCcEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCC
Confidence 99999 66788999999998765432211 12234567999999864 58899999999999999998 8999988
Q ss_pred CChhhHHHHHHcCCccCCCCCCCCCCHHHHHHHHHhcccCccccCCHHHHhcC
Q 042823 228 ETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEH 280 (477)
Q Consensus 228 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h 280 (477)
.+.......+..+... .....++.++.+++.+||+.+|++|||+.+++++
T Consensus 240 ~~~~~~~~~~~~~~~~---~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~ 289 (334)
T cd05100 240 IPVEELFKLLKEGHRM---DKPANCTHELYMIMRECWHAVPSQRPTFKQLVED 289 (334)
T ss_pred CCHHHHHHHHHcCCCC---CCCCCCCHHHHHHHHHHcccChhhCcCHHHHHHH
Confidence 7777776666554321 1224578899999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-40 Score=308.75 Aligned_cols=249 Identities=20% Similarity=0.270 Sum_probs=205.8
Q ss_pred cccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCC
Q 042823 18 YEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDET 97 (477)
Q Consensus 18 ~~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~ 97 (477)
++...++|+++++||+|+||.||+|..+ +++.||+|.+..... ....+.+|+.+++.+ +||||+++++++. ..
T Consensus 1 ~~~~~~~~~~~~~ig~G~~g~v~~~~~~-~~~~~a~K~~~~~~~----~~~~~~~E~~~l~~l-~h~~i~~~~~~~~-~~ 73 (260)
T cd05067 1 WEVPRETLKLVKKLGAGQFGEVWMGYYN-GHTKVAIKSLKQGSM----SPEAFLAEANLMKQL-QHPRLVRLYAVVT-QE 73 (260)
T ss_pred CccchHHceeeeeeccCccceEEeeecC-CCceEEEEEecCCCC----cHHHHHHHHHHHHhc-CCcCeeeEEEEEc-cC
Confidence 3566789999999999999999999865 577899998864332 235678899999999 7999999999875 45
Q ss_pred eEEEEEeccCCCchHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCcc
Q 042823 98 AVHVVMELCEGGDLFDRIIAK--GYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSAL 175 (477)
Q Consensus 98 ~~~lv~e~~~gg~L~~~l~~~--~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~ 175 (477)
..|+||||+.+++|.+++... ..++..++..++.|++.||.|||+.|++||||||+||++ +.++.++|+|||++.
T Consensus 74 ~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~i~H~dl~p~ni~i---~~~~~~~l~dfg~~~ 150 (260)
T cd05067 74 PIYIITEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKNYIHRDLRAANILV---SETLCCKIADFGLAR 150 (260)
T ss_pred CcEEEEEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHHhEEE---cCCCCEEEccCccee
Confidence 789999999999999998763 357889999999999999999999999999999999999 677889999999987
Q ss_pred ccCCCcc--eecccccccccchhhhh-hhcCCccchHhHHHHHHHHhh-CCCCCCCCChhhHHHHHHcCCccCCCCCCCC
Q 042823 176 LFEEGQV--YRDIVGSGFYIAPEVLR-RRYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQGEIDFDTDPWPS 251 (477)
Q Consensus 176 ~~~~~~~--~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~l~t-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 251 (477)
....... .....++..|+|||++. +.++.++||||||+++|+|++ |.+||.+.+.......+..+... +....
T Consensus 151 ~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~---~~~~~ 227 (260)
T cd05067 151 LIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPEVIQNLERGYRM---PRPDN 227 (260)
T ss_pred ecCCCCcccccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHcCCCC---CCCCC
Confidence 6542221 12234567899999986 457889999999999999999 99999887776666665544221 22245
Q ss_pred CCHHHHHHHHHhcccCccccCCHHHHhc
Q 042823 252 ISSTAKDLVRRMLTKDPKRRITAAQVLE 279 (477)
Q Consensus 252 ~~~~~~~li~~~l~~dp~~R~s~~~~l~ 279 (477)
.+.++.+++.+||..+|++|||++++++
T Consensus 228 ~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 255 (260)
T cd05067 228 CPEELYELMRLCWKEKPEERPTFEYLRS 255 (260)
T ss_pred CCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence 7889999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr |
| >cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-40 Score=307.50 Aligned_cols=240 Identities=22% Similarity=0.282 Sum_probs=197.1
Q ss_pred cccccCCeEEEEEEEc--cCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEeccC
Q 042823 30 MLGRGQFGVSYLCTEN--STNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVVMELCE 107 (477)
Q Consensus 30 ~iG~G~~g~V~~~~~~--~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~lv~e~~~ 107 (477)
.||+|+||.||+|.+. .++..||+|++.... .......+.+|+.++.++ +||||++++++++. ...++||||++
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~--~~~~~~~~~~E~~~l~~l-~h~~ii~~~~~~~~-~~~~lv~e~~~ 77 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNEN--EKSVRDEMMREAEIMHQL-DNPYIVRMIGVCEA-EALMLVMEMAS 77 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEccccc--ChHHHHHHHHHHHHHHhc-CCCCeEEEEEEEcC-CCeEEEEEeCC
Confidence 4899999999999775 445679999886442 233456788999999999 79999999998864 57899999999
Q ss_pred CCchHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCCCcce---
Q 042823 108 GGDLFDRIIA-KGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVY--- 183 (477)
Q Consensus 108 gg~L~~~l~~-~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~--- 183 (477)
+|+|.+++.. ...+++..+..++.|++.||.|||++|++||||||+||++ +.++.+||+|||++.........
T Consensus 78 ~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~---~~~~~~kl~dfg~~~~~~~~~~~~~~ 154 (257)
T cd05115 78 GGPLNKFLSGKKDEITVSNVVELMHQVSMGMKYLEGKNFVHRDLAARNVLL---VNQHYAKISDFGLSKALGADDSYYKA 154 (257)
T ss_pred CCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhcCeeecccchheEEE---cCCCcEEeccCCccccccCCccceec
Confidence 9999999875 4578999999999999999999999999999999999999 67788999999998755332211
Q ss_pred -ecccccccccchhhhhh-hcCCccchHhHHHHHHHHhh-CCCCCCCCChhhHHHHHHcCCccCCCCCCCCCCHHHHHHH
Q 042823 184 -RDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLV 260 (477)
Q Consensus 184 -~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~t-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li 260 (477)
....+++.|+|||++.. .++.++|||||||++|+|++ |..||...........+..+... ...+.+++++.+++
T Consensus 155 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~li 231 (257)
T cd05115 155 RSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPEVMSFIEQGKRL---DCPAECPPEMYALM 231 (257)
T ss_pred cCCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCCCCC---CCCCCCCHHHHHHH
Confidence 11223568999999864 68889999999999999996 99999888777776666655422 12246789999999
Q ss_pred HHhcccCccccCCHHHHhc
Q 042823 261 RRMLTKDPKRRITAAQVLE 279 (477)
Q Consensus 261 ~~~l~~dp~~R~s~~~~l~ 279 (477)
.+||..+|++||++.++.+
T Consensus 232 ~~c~~~~~~~Rp~~~~i~~ 250 (257)
T cd05115 232 KDCWIYKWEDRPNFAKVEE 250 (257)
T ss_pred HHHcCCChhhCcCHHHHHH
Confidence 9999999999999999865
|
Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho |
| >cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-40 Score=307.84 Aligned_cols=243 Identities=22% Similarity=0.319 Sum_probs=205.9
Q ss_pred cccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEE
Q 042823 22 MLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHV 101 (477)
Q Consensus 22 ~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~l 101 (477)
..+|++.+.||+|+||.||+|.. .|+.||+|.+..... ....+.+|+.++..+ +||||+++++++.+....|+
T Consensus 5 ~~~~~~~~~ig~g~~g~v~~~~~--~~~~v~iK~~~~~~~----~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~~ 77 (256)
T cd05039 5 SKELKLGATIGKGEFGDVMLGDY--RGQKVAVKCLKDDST----AAQAFLAEASVMTTL-RHPNLVQLLGVVLQGNPLYI 77 (256)
T ss_pred hhhccceeeeecCCCceEEEEEe--cCcEEEEEEeccchh----HHHHHHHHHHHHHhc-CCcceeeeEEEEcCCCCeEE
Confidence 45789999999999999999986 478999999865432 456788899999999 79999999999999999999
Q ss_pred EEeccCCCchHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCC
Q 042823 102 VMELCEGGDLFDRIIAKG--YNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEE 179 (477)
Q Consensus 102 v~e~~~gg~L~~~l~~~~--~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~ 179 (477)
||||+++++|.+++.... .+++..+..++.|++.||.|||++|++||||||+||++ +.++.+||+|||.+.....
T Consensus 78 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~Nili---~~~~~~~l~d~g~~~~~~~ 154 (256)
T cd05039 78 VTEYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKNFVHRDLAARNVLV---SEDLVAKVSDFGLAKEASQ 154 (256)
T ss_pred EEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCccchhcccceEEE---eCCCCEEEccccccccccc
Confidence 999999999999998765 68999999999999999999999999999999999999 6788899999999876633
Q ss_pred Ccceecccccccccchhhhh-hhcCCccchHhHHHHHHHHhh-CCCCCCCCChhhHHHHHHcCCccCCCCCCCCCCHHHH
Q 042823 180 GQVYRDIVGSGFYIAPEVLR-RRYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAK 257 (477)
Q Consensus 180 ~~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~l~t-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 257 (477)
... ...++..|+|||.+. +.++.++||||||+++|+|++ |..||...+.......+..+... .....+|+.+.
T Consensus 155 ~~~--~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~ 229 (256)
T cd05039 155 GQD--SGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPHVEKGYRM---EAPEGCPPEVY 229 (256)
T ss_pred ccc--cCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhcCCCC---CCccCCCHHHH
Confidence 221 233456799999886 468889999999999999997 99999887766666555543221 12245789999
Q ss_pred HHHHHhcccCccccCCHHHHhc
Q 042823 258 DLVRRMLTKDPKRRITAAQVLE 279 (477)
Q Consensus 258 ~li~~~l~~dp~~R~s~~~~l~ 279 (477)
++|.+||..+|++|||+.++++
T Consensus 230 ~li~~~l~~~p~~Rp~~~~l~~ 251 (256)
T cd05039 230 KVMKDCWELDPAKRPTFKQLRE 251 (256)
T ss_pred HHHHHHhccChhhCcCHHHHHH
Confidence 9999999999999999999975
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk |
| >smart00219 TyrKc Tyrosine kinase, catalytic domain | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-40 Score=307.58 Aligned_cols=246 Identities=25% Similarity=0.385 Sum_probs=208.4
Q ss_pred ccccccccccCCeEEEEEEEccCC----ceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEE
Q 042823 25 YFFGRMLGRGQFGVSYLCTENSTN----RPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVH 100 (477)
Q Consensus 25 Y~~~~~iG~G~~g~V~~~~~~~~~----~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~ 100 (477)
+++.+.||.|+||.||+|.+..++ ..||+|++..... ......+.+|+.++..+ +||||+++++++.+.+..|
T Consensus 1 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~ 77 (258)
T smart00219 1 LTLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDAD--EQQIEEFLREARIMRKL-DHPNIVKLLGVCTEEEPLM 77 (258)
T ss_pred CcccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCC--hHHHHHHHHHHHHHHhc-CCCchheEEEEEcCCCeeE
Confidence 357889999999999999998766 8999999854422 12456788999999999 8999999999999999999
Q ss_pred EEEeccCCCchHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccC
Q 042823 101 VVMELCEGGDLFDRIIAKGY--NSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFE 178 (477)
Q Consensus 101 lv~e~~~gg~L~~~l~~~~~--~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~ 178 (477)
++|||++|++|.+++..... +++..+..++.|++.||.|||+.|++||||||+||++ +..+.++|+|||.+....
T Consensus 78 ~i~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~~~h~dl~~~nil~---~~~~~~~l~dfg~~~~~~ 154 (258)
T smart00219 78 IVMEYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESKNFIHRDLAARNCLV---GENLVVKISDFGLSRDLY 154 (258)
T ss_pred EEEeccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcCCeeecccccceEEE---ccCCeEEEcccCCceecc
Confidence 99999999999999976554 8999999999999999999999999999999999999 677789999999987665
Q ss_pred CCccee--cccccccccchhhhhh-hcCCccchHhHHHHHHHHhh-CCCCCCCCChhhHHHHHHcCCccCCCCCCCCCCH
Q 042823 179 EGQVYR--DIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQGEIDFDTDPWPSISS 254 (477)
Q Consensus 179 ~~~~~~--~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~t-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 254 (477)
...... ...+++.|+|||.+.+ .++.++||||+|+++|+|++ |.+||...........+..+..... ...++.
T Consensus 155 ~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~ 231 (258)
T smart00219 155 DDDYYKKKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSNEEVLEYLKKGYRLPK---PENCPP 231 (258)
T ss_pred cccccccccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCCCCC---CCcCCH
Confidence 432221 1236788999999854 58899999999999999998 8999988777777777766543322 234789
Q ss_pred HHHHHHHHhcccCccccCCHHHHhc
Q 042823 255 TAKDLVRRMLTKDPKRRITAAQVLE 279 (477)
Q Consensus 255 ~~~~li~~~l~~dp~~R~s~~~~l~ 279 (477)
++.+++.+||..+|++|||+.++++
T Consensus 232 ~~~~~i~~~l~~~p~~Rpt~~~ll~ 256 (258)
T smart00219 232 EIYKLMLQCWAEDPEDRPTFSELVE 256 (258)
T ss_pred HHHHHHHHHCcCChhhCcCHHHHHh
Confidence 9999999999999999999999985
|
Phosphotransferases. Tyrosine-specific kinase subfamily. |
| >cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-40 Score=313.40 Aligned_cols=247 Identities=19% Similarity=0.286 Sum_probs=201.6
Q ss_pred cccccccccccCCeEEEEEEEcc-----CCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCe
Q 042823 24 HYFFGRMLGRGQFGVSYLCTENS-----TNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETA 98 (477)
Q Consensus 24 ~Y~~~~~iG~G~~g~V~~~~~~~-----~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~ 98 (477)
+|++.+.||+|+||.||+|.+.. ....+|+|.+..... ......+.+|+.++..+ .||||+++++.+...+.
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~--~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~ 77 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENAS--SSELRDLLSEFNLLKQV-NHPHVIKLYGACSQDGP 77 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCC--HHHHHHHHHHHHHHhhC-CCCCEeeEEEEEecCCC
Confidence 58899999999999999998753 235688888754322 23456788999999999 79999999999999999
Q ss_pred EEEEEeccCCCchHHHHHHc------------------------CCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCc
Q 042823 99 VHVVMELCEGGDLFDRIIAK------------------------GYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPEN 154 (477)
Q Consensus 99 ~~lv~e~~~gg~L~~~l~~~------------------------~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~N 154 (477)
.|+||||+.+|+|.+++... ..++...+..++.|++.||.|||++|++||||||+|
T Consensus 78 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~ivH~dikp~n 157 (290)
T cd05045 78 LLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMKLVHRDLAARN 157 (290)
T ss_pred cEEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCCeehhhhhhhe
Confidence 99999999999999988642 246788899999999999999999999999999999
Q ss_pred eeeeecCCCCCEEEeecCCccccCCCcc---eecccccccccchhhhhh-hcCCccchHhHHHHHHHHhh-CCCCCCCCC
Q 042823 155 FSFISRDDNALLKVTDFGSALLFEEGQV---YRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLS-GVPPFWAET 229 (477)
Q Consensus 155 il~~~~~~~~~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~t-g~~pf~~~~ 229 (477)
|++ ++++.+||+|||++........ .....++..|+|||.+.+ .++.++||||||+++|+|++ |..||.+..
T Consensus 158 ill---~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~ 234 (290)
T cd05045 158 VLV---AEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIA 234 (290)
T ss_pred EEE---cCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCCC
Confidence 999 6678899999999875432221 122345678999998764 58899999999999999998 999998777
Q ss_pred hhhHHHHHHcCCccCCCCCCCCCCHHHHHHHHHhcccCccccCCHHHHhc
Q 042823 230 KKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLE 279 (477)
Q Consensus 230 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~ 279 (477)
.......+... ...+ ....++.++.+++.+||+.+|++||++.++++
T Consensus 235 ~~~~~~~~~~~-~~~~--~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~ 281 (290)
T cd05045 235 PERLFNLLKTG-YRME--RPENCSEEMYNLMLTCWKQEPDKRPTFADISK 281 (290)
T ss_pred HHHHHHHHhCC-CCCC--CCCCCCHHHHHHHHHHccCCcccCCCHHHHHH
Confidence 66665554443 2222 22467899999999999999999999999974
|
Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi |
| >cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-40 Score=310.17 Aligned_cols=248 Identities=21% Similarity=0.337 Sum_probs=205.9
Q ss_pred ccccccccccccCCeEEEEEEEccCCc---eEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeE
Q 042823 23 LHYFFGRMLGRGQFGVSYLCTENSTNR---PYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAV 99 (477)
Q Consensus 23 ~~Y~~~~~iG~G~~g~V~~~~~~~~~~---~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~ 99 (477)
.+|++.+.||+|+||.||+|.++.+++ .||+|.+.... .......+..|+.+++.+ +||||+++++++..+..+
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~l~~l-~h~ni~~~~~~~~~~~~~ 80 (269)
T cd05065 4 SCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGY--TEKQRRDFLSEASIMGQF-DHPNIIHLEGVVTKSRPV 80 (269)
T ss_pred HHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCC--CHHHHHHHHHHHHHHHhC-CCcCcceEEEEECCCCce
Confidence 468999999999999999999877665 59999886432 233456788999999998 799999999999999999
Q ss_pred EEEEeccCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccC
Q 042823 100 HVVMELCEGGDLFDRIIAK-GYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFE 178 (477)
Q Consensus 100 ~lv~e~~~gg~L~~~l~~~-~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~ 178 (477)
++||||+++|+|.+++... +.++..++..++.|++.||.|||++|++||||||+||++ +.++.+||+|||++....
T Consensus 81 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~l~~al~~lH~~g~~H~dl~p~nili---~~~~~~kl~dfg~~~~~~ 157 (269)
T cd05065 81 MIITEFMENGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLSEMNYVHRDLAARNILV---NSNLVCKVSDFGLSRFLE 157 (269)
T ss_pred EEEEecCCCCcHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccChheEEE---cCCCcEEECCCccccccc
Confidence 9999999999999998764 568999999999999999999999999999999999999 677899999999887653
Q ss_pred CCcce---eccc---ccccccchhhhh-hhcCCccchHhHHHHHHHHhh-CCCCCCCCChhhHHHHHHcCCccCCCCCCC
Q 042823 179 EGQVY---RDIV---GSGFYIAPEVLR-RRYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQGEIDFDTDPWP 250 (477)
Q Consensus 179 ~~~~~---~~~~---gt~~y~aPE~~~-~~~~~~~DiwslG~il~~l~t-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~ 250 (477)
..... .... .+..|+|||.+. +.++.++||||+||++|+|++ |..||...........+... . ..+..+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~~~~~~i~~~-~--~~~~~~ 234 (269)
T cd05065 158 DDTSDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVINAIEQD-Y--RLPPPM 234 (269)
T ss_pred cCccccccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCHHHHHHHHHcC-C--cCCCcc
Confidence 32211 1111 234799999986 468899999999999999886 99999887777666666443 2 222234
Q ss_pred CCCHHHHHHHHHhcccCccccCCHHHHhc
Q 042823 251 SISSTAKDLVRRMLTKDPKRRITAAQVLE 279 (477)
Q Consensus 251 ~~~~~~~~li~~~l~~dp~~R~s~~~~l~ 279 (477)
.++..+.+++.+||..+|++||++.+++.
T Consensus 235 ~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 263 (269)
T cd05065 235 DCPTALHQLMLDCWQKDRNARPKFGQIVS 263 (269)
T ss_pred cCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 67899999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr |
| >cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-40 Score=314.96 Aligned_cols=252 Identities=20% Similarity=0.264 Sum_probs=201.4
Q ss_pred cccccccccccccCCeEEEEEEEccC--------------CceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCee
Q 042823 22 MLHYFFGRMLGRGQFGVSYLCTENST--------------NRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVV 87 (477)
Q Consensus 22 ~~~Y~~~~~iG~G~~g~V~~~~~~~~--------------~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv 87 (477)
..+|++.+.||+|+||.||+|++..+ ...||+|.+.... .......+.+|++++..+ +||||+
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~ei~~l~~l-~h~~i~ 80 (295)
T cd05097 4 RQQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADV--TKTARNDFLKEIKIMSRL-KNPNII 80 (295)
T ss_pred hHhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCC--CHHHHHHHHHHHHHHHhC-CCCCcC
Confidence 45899999999999999999987543 2358999886432 233456788999999999 799999
Q ss_pred EEEEEEEeCCeEEEEEeccCCCchHHHHHHcC------------CCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCce
Q 042823 88 EFKSTYEDETAVHVVMELCEGGDLFDRIIAKG------------YNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENF 155 (477)
Q Consensus 88 ~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~------------~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Ni 155 (477)
++++++......++||||+.+++|.+++.... .++...+..++.|++.||.|||++|++||||||+||
T Consensus 81 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Ni 160 (295)
T cd05097 81 RLLGVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLNFVHRDLATRNC 160 (295)
T ss_pred eEEEEEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcCeeccccChhhE
Confidence 99999999999999999999999999986532 357788899999999999999999999999999999
Q ss_pred eeeecCCCCCEEEeecCCccccCCCcc---eecccccccccchhhhh-hhcCCccchHhHHHHHHHHhh--CCCCCCCCC
Q 042823 156 SFISRDDNALLKVTDFGSALLFEEGQV---YRDIVGSGFYIAPEVLR-RRYGKEIDIWSAGVILYILLS--GVPPFWAET 229 (477)
Q Consensus 156 l~~~~~~~~~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~l~t--g~~pf~~~~ 229 (477)
++ +.++.+||+|||++........ .....+++.|+|||++. +.++.++|||||||++|+|++ |..||...+
T Consensus 161 ll---~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~ 237 (295)
T cd05097 161 LV---GNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLLS 237 (295)
T ss_pred EE---cCCCcEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcccC
Confidence 99 6677899999999876433221 11234567899999875 468999999999999999988 678887766
Q ss_pred hhhHHHHHHcC----CccCCCCCCCCCCHHHHHHHHHhcccCccccCCHHHHhc
Q 042823 230 KKGTYDAILQG----EIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLE 279 (477)
Q Consensus 230 ~~~~~~~i~~~----~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~ 279 (477)
.......+... .........+.+++.+.+|+.+||+.+|++|||+.++++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~ 291 (295)
T cd05097 238 DEQVIENTGEFFRNQGRQIYLSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHH 291 (295)
T ss_pred hHHHHHHHHHhhhhccccccCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence 65554443221 111111123457899999999999999999999999964
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including |
| >cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-40 Score=311.32 Aligned_cols=247 Identities=18% Similarity=0.230 Sum_probs=199.2
Q ss_pred ccccccccccccCCeEEEEEEEccCCce----EEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCe
Q 042823 23 LHYFFGRMLGRGQFGVSYLCTENSTNRP----YACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETA 98 (477)
Q Consensus 23 ~~Y~~~~~iG~G~~g~V~~~~~~~~~~~----~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~ 98 (477)
++|++.+.||+|+||+||+|.+..++.. +++|.+.... .......+..|+.++..+ +||||+++++++. ...
T Consensus 7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~~~~~l~~l-~h~~iv~~~~~~~-~~~ 82 (279)
T cd05111 7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRS--GRQTFQEITDHMLAMGSL-DHAYIVRLLGICP-GAS 82 (279)
T ss_pred hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeeccccc--chHHHHHHHHHHHHHhcC-CCCCcceEEEEEC-CCc
Confidence 5789999999999999999999877764 6666653221 122345677788888888 7999999999875 456
Q ss_pred EEEEEeccCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCcccc
Q 042823 99 VHVVMELCEGGDLFDRIIAK-GYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLF 177 (477)
Q Consensus 99 ~~lv~e~~~gg~L~~~l~~~-~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~ 177 (477)
.++|+||+++|+|.+++... +.+++..+..++.||+.||.|||++|++||||||+||++ +.++.+||+|||++...
T Consensus 83 ~~~i~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~nili---~~~~~~kl~Dfg~~~~~ 159 (279)
T cd05111 83 LQLVTQLSPLGSLLDHVRQHRDSLDPQRLLNWCVQIAKGMYYLEEHRMVHRNLAARNILL---KSDSIVQIADFGVADLL 159 (279)
T ss_pred cEEEEEeCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEE---cCCCcEEEcCCccceec
Confidence 78999999999999999764 568999999999999999999999999999999999999 67888999999999765
Q ss_pred CCCc---ceecccccccccchhhhh-hhcCCccchHhHHHHHHHHhh-CCCCCCCCChhhHHHHHHcCCccCCCCCCCCC
Q 042823 178 EEGQ---VYRDIVGSGFYIAPEVLR-RRYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQGEIDFDTDPWPSI 252 (477)
Q Consensus 178 ~~~~---~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~l~t-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 252 (477)
.... ......++..|+|||.+. +.++.++|||||||++|+|++ |..||.+.........+..+..... ...+
T Consensus 160 ~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~---~~~~ 236 (279)
T cd05111 160 YPDDKKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHEVPDLLEKGERLAQ---PQIC 236 (279)
T ss_pred cCCCcccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCcCCC---CCCC
Confidence 3322 122345677899999986 468999999999999999998 9999987766555444544432221 1246
Q ss_pred CHHHHHHHHHhcccCccccCCHHHHhc
Q 042823 253 SSTAKDLVRRMLTKDPKRRITAAQVLE 279 (477)
Q Consensus 253 ~~~~~~li~~~l~~dp~~R~s~~~~l~ 279 (477)
+.++.+++.+||..+|++|||+.++++
T Consensus 237 ~~~~~~li~~c~~~~p~~Rps~~el~~ 263 (279)
T cd05111 237 TIDVYMVMVKCWMIDENVRPTFKELAN 263 (279)
T ss_pred CHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence 788999999999999999999999865
|
Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r |
| >cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-40 Score=307.94 Aligned_cols=242 Identities=22% Similarity=0.303 Sum_probs=201.6
Q ss_pred cccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEE-EeCCeEE
Q 042823 22 MLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTY-EDETAVH 100 (477)
Q Consensus 22 ~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~-~~~~~~~ 100 (477)
..+|++.+.||+|+||.||+|.. .|..+|+|.+... .....+.+|+.+++.+ +|||++++++++ ..+...|
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~--~~~~~~~k~~~~~-----~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~~ 76 (256)
T cd05082 5 MKELKLLQTIGKGEFGDVMLGDY--RGNKVAVKCIKND-----ATAQAFLAEASVMTQL-RHSNLVQLLGVIVEEKGGLY 76 (256)
T ss_pred HHhCeeeeeecccCCCeEEEEEE--cCCcEEEEEeCCC-----chHHHHHHHHHHHHhC-CCCCeeeEEEEEEcCCCceE
Confidence 45799999999999999999976 4788999987533 2245678899999999 799999999975 4556799
Q ss_pred EEEeccCCCchHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccC
Q 042823 101 VVMELCEGGDLFDRIIAKG--YNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFE 178 (477)
Q Consensus 101 lv~e~~~gg~L~~~l~~~~--~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~ 178 (477)
+||||+++++|.+++.+.+ .+++..+..++.|++.||.|||++|++||||||+||++ +.++.+||+|||++....
T Consensus 77 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~---~~~~~~kl~dfg~~~~~~ 153 (256)
T cd05082 77 IVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANNFVHRDLAARNVLV---SEDNVAKVSDFGLTKEAS 153 (256)
T ss_pred EEEECCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccccchheEEE---cCCCcEEecCCccceecc
Confidence 9999999999999998654 37889999999999999999999999999999999999 778899999999887543
Q ss_pred CCcceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhh-CCCCCCCCChhhHHHHHHcCCccCCCCCCCCCCHHH
Q 042823 179 EGQVYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTA 256 (477)
Q Consensus 179 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~t-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 256 (477)
... ....++..|+|||++.+ .++.++|||||||++|+|++ |.+||...........+.++.. ....+.+++.+
T Consensus 154 ~~~--~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~ 228 (256)
T cd05082 154 STQ--DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYK---MDAPDGCPPVV 228 (256)
T ss_pred ccC--CCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCC---CCCCCCCCHHH
Confidence 322 22344567999999865 58889999999999999997 9999987776666666655422 22235678999
Q ss_pred HHHHHHhcccCccccCCHHHHhc
Q 042823 257 KDLVRRMLTKDPKRRITAAQVLE 279 (477)
Q Consensus 257 ~~li~~~l~~dp~~R~s~~~~l~ 279 (477)
.+++.+||+.+|++|||+.++++
T Consensus 229 ~~li~~~l~~~p~~Rpt~~~l~~ 251 (256)
T cd05082 229 YDVMKQCWHLDAATRPSFLQLRE 251 (256)
T ss_pred HHHHHHHhcCChhhCcCHHHHHH
Confidence 99999999999999999999975
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re |
| >cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-40 Score=307.98 Aligned_cols=249 Identities=24% Similarity=0.307 Sum_probs=208.4
Q ss_pred ccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCe
Q 042823 19 EDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETA 98 (477)
Q Consensus 19 ~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~ 98 (477)
+...++|++.+.||+|+||.||+|.+. .++.+|+|.+..... ....+.+|+.+++.+ +||||+++++++.....
T Consensus 2 ~~~~~~~~i~~~ig~g~~~~v~~~~~~-~~~~~~vK~~~~~~~----~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~ 75 (261)
T cd05034 2 EIPRESLKLERKLGAGQFGEVWMGTWN-GTTKVAVKTLKPGTM----SPEAFLQEAQIMKKL-RHDKLVQLYAVCSEEEP 75 (261)
T ss_pred ccchhheeeeeeeccCcceEEEEEEEc-CCceEEEEEecCCcc----CHHHHHHHHHHHhhC-CCCCEeeeeeeeecCCc
Confidence 345778999999999999999999875 457899998864332 245688899999999 69999999999999899
Q ss_pred EEEEEeccCCCchHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccc
Q 042823 99 VHVVMELCEGGDLFDRIIAKG--YNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALL 176 (477)
Q Consensus 99 ~~lv~e~~~gg~L~~~l~~~~--~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~ 176 (477)
.++||||+++++|.+++.... .++...+..++.|++.||.|||++|++||||||+||++ +.++.+||+|||.+..
T Consensus 76 ~~~v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~~i~h~di~p~nili---~~~~~~~l~d~g~~~~ 152 (261)
T cd05034 76 IYIVTEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESRNYIHRDLAARNILV---GENLVCKIADFGLARL 152 (261)
T ss_pred eEEEEeccCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcchheEEE---cCCCCEEECcccccee
Confidence 999999999999999997643 68999999999999999999999999999999999999 7778999999999876
Q ss_pred cCCCcc--eecccccccccchhhhhh-hcCCccchHhHHHHHHHHhh-CCCCCCCCChhhHHHHHHcCCccCCCCCCCCC
Q 042823 177 FEEGQV--YRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQGEIDFDTDPWPSI 252 (477)
Q Consensus 177 ~~~~~~--~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~t-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 252 (477)
...... .....++..|+|||.+.+ .++.++||||+|+++|+|++ |+.||.+.........+..+... ......
T Consensus 153 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~~~~---~~~~~~ 229 (261)
T cd05034 153 IEDDEYTAREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNREVLEQVERGYRM---PRPPNC 229 (261)
T ss_pred ccchhhhhhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCC---CCCCCC
Confidence 543211 112234567999999864 58889999999999999998 99999888777777776654221 112356
Q ss_pred CHHHHHHHHHhcccCccccCCHHHHhc
Q 042823 253 SSTAKDLVRRMLTKDPKRRITAAQVLE 279 (477)
Q Consensus 253 ~~~~~~li~~~l~~dp~~R~s~~~~l~ 279 (477)
+.++.+++.+||+.+|++||++.++++
T Consensus 230 ~~~~~~~i~~~l~~~p~~Rp~~~~l~~ 256 (261)
T cd05034 230 PEELYDLMLQCWDKDPEERPTFEYLQS 256 (261)
T ss_pred CHHHHHHHHHHcccCcccCCCHHHHHH
Confidence 889999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t |
| >cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-40 Score=307.78 Aligned_cols=247 Identities=23% Similarity=0.305 Sum_probs=203.1
Q ss_pred cccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeE
Q 042823 20 DVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAV 99 (477)
Q Consensus 20 ~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~ 99 (477)
...++|.+.+.||+|++|.||+|.+..+ ..+|+|.+..... ....+.+|++++..+ +|||++++++++.. ...
T Consensus 3 ~~~~~~~~~~~ig~g~~~~v~~~~~~~~-~~~~lK~~~~~~~----~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~-~~~ 75 (260)
T cd05069 3 IPRESLRLDVKLGQGCFGEVWMGTWNGT-TKVAIKTLKPGTM----MPEAFLQEAQIMKKL-RHDKLVPLYAVVSE-EPI 75 (260)
T ss_pred CChHHeeeeeeecCcCCCeEEEEEEcCC-ceEEEEEcccCCc----cHHHHHHHHHHHHhC-CCCCeeeEEEEEcC-CCc
Confidence 4457899999999999999999988655 4699998754322 235677899999999 79999999998854 568
Q ss_pred EEEEeccCCCchHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCcccc
Q 042823 100 HVVMELCEGGDLFDRIIAKG--YNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLF 177 (477)
Q Consensus 100 ~lv~e~~~gg~L~~~l~~~~--~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~ 177 (477)
|+||||+.+|+|.+++.... .++...+..++.|++.||.|||+.|++||||||+||++ ++++.++|+|||.+...
T Consensus 76 ~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dl~~~Nill---~~~~~~~l~dfg~~~~~ 152 (260)
T cd05069 76 YIVTEFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMNYIHRDLRAANILV---GDNLVCKIADFGLARLI 152 (260)
T ss_pred EEEEEcCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEE---cCCCeEEECCCccceEc
Confidence 89999999999999997643 47889999999999999999999999999999999999 77888999999998765
Q ss_pred CCCcc--eecccccccccchhhhh-hhcCCccchHhHHHHHHHHhh-CCCCCCCCChhhHHHHHHcCCccCCCCCCCCCC
Q 042823 178 EEGQV--YRDIVGSGFYIAPEVLR-RRYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQGEIDFDTDPWPSIS 253 (477)
Q Consensus 178 ~~~~~--~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~l~t-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 253 (477)
..... .....++..|+|||... +.++.++||||||+++|+|+| |.+||.+.........+..+.. .......+
T Consensus 153 ~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~---~~~~~~~~ 229 (260)
T cd05069 153 EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNREVLEQVERGYR---MPCPQGCP 229 (260)
T ss_pred cCCcccccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCC---CCCCcccC
Confidence 43221 12234567899999886 458889999999999999999 9999988777777666655421 12224678
Q ss_pred HHHHHHHHHhcccCccccCCHHHHhc
Q 042823 254 STAKDLVRRMLTKDPKRRITAAQVLE 279 (477)
Q Consensus 254 ~~~~~li~~~l~~dp~~R~s~~~~l~ 279 (477)
..+.+++++||.+||++||+++++++
T Consensus 230 ~~~~~li~~~l~~~p~~Rp~~~~i~~ 255 (260)
T cd05069 230 ESLHELMKLCWKKDPDERPTFEYIQS 255 (260)
T ss_pred HHHHHHHHHHccCCcccCcCHHHHHH
Confidence 99999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an |
| >KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-41 Score=324.74 Aligned_cols=262 Identities=30% Similarity=0.451 Sum_probs=223.6
Q ss_pred ccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEE
Q 042823 21 VMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVH 100 (477)
Q Consensus 21 ~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~ 100 (477)
-..-|..++.||-|+||.|.++...+|...||.|.+.+...........+..|-.||..- +.+=||++|..|++++.+|
T Consensus 627 dKSmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEA-Dn~WVVrLyySFQDkdnLY 705 (1034)
T KOG0608|consen 627 DKSMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEA-DNEWVVRLYYSFQDKDNLY 705 (1034)
T ss_pred cccceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhc-CCcceEEEEEEeccCCceE
Confidence 344578889999999999999999999999999999887655555566677888888777 7999999999999999999
Q ss_pred EEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCC-
Q 042823 101 VVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEE- 179 (477)
Q Consensus 101 lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~- 179 (477)
+||||++||++..+|.+.+.|+|..++.++..+..|+++.|..|+|||||||+|||+ +.+|+|||+|||+++-+..
T Consensus 706 FVMdYIPGGDmMSLLIrmgIFeE~LARFYIAEltcAiesVHkmGFIHRDiKPDNILI---DrdGHIKLTDFGLCTGfRWT 782 (1034)
T KOG0608|consen 706 FVMDYIPGGDMMSLLIRMGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILI---DRDGHIKLTDFGLCTGFRWT 782 (1034)
T ss_pred EEEeccCCccHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHhccceecccCccceEE---ccCCceeeeeccccccceec
Confidence 999999999999999999999999999999999999999999999999999999999 8899999999999864310
Q ss_pred --------Cc----------------------------------ceecccccccccchhhhh-hhcCCccchHhHHHHHH
Q 042823 180 --------GQ----------------------------------VYRDIVGSGFYIAPEVLR-RRYGKEIDIWSAGVILY 216 (477)
Q Consensus 180 --------~~----------------------------------~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~ 216 (477)
+. .-...+||+.|+|||++. ..|+..||.||.|||||
T Consensus 783 HdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~gvil~ 862 (1034)
T KOG0608|consen 783 HDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVGVILY 862 (1034)
T ss_pred cccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHhhHHHH
Confidence 00 001247999999999986 47999999999999999
Q ss_pred HHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCCCCHHHHHHHHHhcccCccccCC---HHHHhcCcccCcCC
Q 042823 217 ILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRIT---AAQVLEHPWLRESG 287 (477)
Q Consensus 217 ~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s---~~~~l~h~~~~~~~ 287 (477)
+|+.|++||...+..+....+.+-...+....--++|.++.++|.+++ .+++.|.. ++++-.||||+...
T Consensus 863 em~~g~~pf~~~tp~~tq~kv~nw~~~l~~~~~~~ls~e~~~li~kLc-~sad~RLGkng~d~vKaHpfFkgID 935 (1034)
T KOG0608|consen 863 EMLVGQPPFLADTPGETQYKVINWRNFLHIPYQGNLSKEALDLIQKLC-CSADSRLGKNGADQVKAHPFFKGID 935 (1034)
T ss_pred HHhhCCCCccCCCCCcceeeeeehhhccccccccccCHHHHHHHHHHh-cChhhhhcccchhhhhcCccccccc
Confidence 999999999998887776666655444444444578999999998876 46888874 67899999998653
|
|
| >KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-41 Score=303.42 Aligned_cols=261 Identities=28% Similarity=0.460 Sum_probs=228.3
Q ss_pred cccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeE
Q 042823 20 DVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAV 99 (477)
Q Consensus 20 ~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~ 99 (477)
.-.++|.+.++||+|+|+.|.+++++.|.+.||+|++++.........+.+..|-.+..+..+||.+|-++.+|+.+..+
T Consensus 247 l~l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrl 326 (593)
T KOG0695|consen 247 LGLQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRL 326 (593)
T ss_pred cccccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceE
Confidence 44568999999999999999999999999999999998877666677788888888888888999999999999999999
Q ss_pred EEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccc-cC
Q 042823 100 HVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALL-FE 178 (477)
Q Consensus 100 ~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~-~~ 178 (477)
++|.||++||+|.-.+.++..+++..++.+...|+.||+|||+.||+.||||.+|+|+ +..+++||+|+|+++. +.
T Consensus 327 ffvieyv~ggdlmfhmqrqrklpeeharfys~ei~lal~flh~rgiiyrdlkldnvll---daeghikltdygmcke~l~ 403 (593)
T KOG0695|consen 327 FFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEICLALNFLHERGIIYRDLKLDNVLL---DAEGHIKLTDYGMCKEGLG 403 (593)
T ss_pred EEEEEEecCcceeeehhhhhcCcHHHhhhhhHHHHHHHHHHhhcCeeeeeccccceEE---ccCCceeecccchhhcCCC
Confidence 9999999999998888888899999999999999999999999999999999999999 8899999999999875 45
Q ss_pred CCcceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCC--------ChhhHHHHHHcCCccCCCCCC
Q 042823 179 EGQVYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAE--------TKKGTYDAILQGEIDFDTDPW 249 (477)
Q Consensus 179 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~--------~~~~~~~~i~~~~~~~~~~~~ 249 (477)
++....+++|||.|.|||++++ .|+..+|.|+|||+++||+.|+.||.-- +..-.++-|+......+
T Consensus 404 ~gd~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylfqvilekqirip---- 479 (593)
T KOG0695|consen 404 PGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQVILEKQIRIP---- 479 (593)
T ss_pred CCcccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHHHhhhccccc----
Confidence 6667788999999999999997 5999999999999999999999999421 12223444555554443
Q ss_pred CCCCHHHHHHHHHhcccCccccCC------HHHHhcCcccCcCC
Q 042823 250 PSISSTAKDLVRRMLTKDPKRRIT------AAQVLEHPWLRESG 287 (477)
Q Consensus 250 ~~~~~~~~~li~~~l~~dp~~R~s------~~~~l~h~~~~~~~ 287 (477)
.++|-.+..+++..|.+||.+|.. ..++..|+||+...
T Consensus 480 rslsvkas~vlkgflnkdp~erlgc~~~~g~~dik~h~ffr~id 523 (593)
T KOG0695|consen 480 RSLSVKASHVLKGFLNKDPKERLGCRPQTGFSDIKSHAFFRSID 523 (593)
T ss_pred ceeehhhHHHHHHhhcCCcHHhcCCCcccchhhhhcchhhhhCC
Confidence 367888899999999999999974 57889999998543
|
|
| >KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-40 Score=332.95 Aligned_cols=260 Identities=25% Similarity=0.393 Sum_probs=221.9
Q ss_pred ccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEE----
Q 042823 19 EDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYE---- 94 (477)
Q Consensus 19 ~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~---- 94 (477)
-+..+.|.|...||.|.+|.||+++++.+++..|+|+..... ...++++.|..+++.+.+|||++.+|++|.
T Consensus 15 pdp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~----d~deEiE~eynil~~~~~hpnv~~fyg~~~k~~~ 90 (953)
T KOG0587|consen 15 PDPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTE----DEEEEIELEYNMLKKYSHHPNVATFYGAFIKKDP 90 (953)
T ss_pred CCCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCc----cccHHHHHHHHHHHhccCCCCcceEEEEEEEecC
Confidence 345667899999999999999999999999999999875433 345678889999999999999999999995
Q ss_pred -eCCeEEEEEeccCCCchHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeec
Q 042823 95 -DETAVHVVMELCEGGDLFDRIIA--KGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDF 171 (477)
Q Consensus 95 -~~~~~~lv~e~~~gg~L~~~l~~--~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Df 171 (477)
.++.++||||||.|||..|+++. ..++.|..++.|++.+|.||.+||.+.++|||||-.|||+ ..++.|||+||
T Consensus 91 ~~~DqLWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~nkviHRDikG~NiLL---T~e~~VKLvDF 167 (953)
T KOG0587|consen 91 GNGDQLWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNNKVIHRDIKGQNVLL---TENAEVKLVDF 167 (953)
T ss_pred CCCCeEEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhcceeeecccCceEEE---eccCcEEEeee
Confidence 35789999999999999999876 4578999999999999999999999999999999999999 78899999999
Q ss_pred CCccccCCCc-ceecccccccccchhhhh------hhcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccC
Q 042823 172 GSALLFEEGQ-VYRDIVGSGFYIAPEVLR------RRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDF 244 (477)
Q Consensus 172 g~a~~~~~~~-~~~~~~gt~~y~aPE~~~------~~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~ 244 (477)
|++..+.... ...+.+|||+|||||++. ..|+..+|+||||++..||.-|.+|+....+...+-.|-+...+-
T Consensus 168 GvSaQldsT~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPmraLF~IpRNPPPk 247 (953)
T KOG0587|consen 168 GVSAQLDSTVGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPPPK 247 (953)
T ss_pred eeeeeeecccccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchhhhhccCCCCCCcc
Confidence 9998775443 345689999999999984 237889999999999999999999998877766555544432211
Q ss_pred CCCCCCCCCHHHHHHHHHhcccCccccCCHHHHhcCcccCcC
Q 042823 245 DTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRES 286 (477)
Q Consensus 245 ~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~ 286 (477)
...|...+.++.+||..||.+|-++||+..++|+|||++..
T Consensus 248 -Lkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~hpFi~e~ 288 (953)
T KOG0587|consen 248 -LKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLKHPFITEQ 288 (953)
T ss_pred -ccchhhHHHHHHHHHHHHHhhccccCcchhhhccCCccccc
Confidence 11234678999999999999999999999999999999843
|
|
| >cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.7e-40 Score=311.97 Aligned_cols=249 Identities=19% Similarity=0.280 Sum_probs=205.9
Q ss_pred cccccccccccccCCeEEEEEEEc-----cCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeC
Q 042823 22 MLHYFFGRMLGRGQFGVSYLCTEN-----STNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDE 96 (477)
Q Consensus 22 ~~~Y~~~~~iG~G~~g~V~~~~~~-----~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~ 96 (477)
.++|++.+.||+|+||.||+|.+. .++..||+|++.... .......+.+|+.++..+ +||||+++++++...
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~ei~~l~~l-~h~~iv~~~~~~~~~ 80 (288)
T cd05050 4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEA--SADMQADFQREAALMAEF-DHPNIVKLLGVCAVG 80 (288)
T ss_pred hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCc--CHHHHHHHHHHHHHHHhc-CCCchheEEEEEcCC
Confidence 467999999999999999999874 367889999886432 223446688899999999 799999999999999
Q ss_pred CeEEEEEeccCCCchHHHHHHcC----------------------CCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCc
Q 042823 97 TAVHVVMELCEGGDLFDRIIAKG----------------------YNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPEN 154 (477)
Q Consensus 97 ~~~~lv~e~~~gg~L~~~l~~~~----------------------~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~N 154 (477)
...|+||||+++|+|.+++.... .+++..+..++.|++.||.|||++|++||||||+|
T Consensus 81 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~i~H~dl~p~n 160 (288)
T cd05050 81 KPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERKFVHRDLATRN 160 (288)
T ss_pred CccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCeecccccHhh
Confidence 99999999999999999997532 36778889999999999999999999999999999
Q ss_pred eeeeecCCCCCEEEeecCCccccCCCcc---eecccccccccchhhhh-hhcCCccchHhHHHHHHHHhh-CCCCCCCCC
Q 042823 155 FSFISRDDNALLKVTDFGSALLFEEGQV---YRDIVGSGFYIAPEVLR-RRYGKEIDIWSAGVILYILLS-GVPPFWAET 229 (477)
Q Consensus 155 il~~~~~~~~~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~l~t-g~~pf~~~~ 229 (477)
|++ +.++.+||+|||.+........ .....++..|+|||.+. ..++.++|||||||++|+|++ |..||.+..
T Consensus 161 il~---~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~~ 237 (288)
T cd05050 161 CLV---GENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMA 237 (288)
T ss_pred eEe---cCCCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCC
Confidence 998 6788899999998875432211 11223466799999876 468999999999999999998 888998877
Q ss_pred hhhHHHHHHcCCccCCCCCCCCCCHHHHHHHHHhcccCccccCCHHHHhc
Q 042823 230 KKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLE 279 (477)
Q Consensus 230 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~ 279 (477)
..+....+..+..... .+.++.++.+|+.+||+.+|++|||+.++++
T Consensus 238 ~~~~~~~~~~~~~~~~---~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~ 284 (288)
T cd05050 238 HEEVIYYVRDGNVLSC---PDNCPLELYNLMRLCWSKLPSDRPSFASINR 284 (288)
T ss_pred HHHHHHHHhcCCCCCC---CCCCCHHHHHHHHHHcccCcccCCCHHHHHH
Confidence 7777766665543211 1357899999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M |
| >cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-39 Score=307.29 Aligned_cols=249 Identities=22% Similarity=0.331 Sum_probs=206.0
Q ss_pred cccccccccccccCCeEEEEEEEccCCc---eEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCe
Q 042823 22 MLHYFFGRMLGRGQFGVSYLCTENSTNR---PYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETA 98 (477)
Q Consensus 22 ~~~Y~~~~~iG~G~~g~V~~~~~~~~~~---~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~ 98 (477)
.++|+..+.||+|+||.||+|.++.+++ .+|+|.+.... .......+.+|+.++..+ +||||+++++++...+.
T Consensus 4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~ 80 (268)
T cd05063 4 PSHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGY--TEKQRQDFLSEASIMGQF-SHHNIIRLEGVVTKFKP 80 (268)
T ss_pred hHHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccC--CHHHHHHHHHHHHHHhcC-CCCCeeEEEEEEccCCC
Confidence 3478889999999999999999876655 68999885432 223456788899999988 79999999999999999
Q ss_pred EEEEEeccCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCcccc
Q 042823 99 VHVVMELCEGGDLFDRIIAK-GYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLF 177 (477)
Q Consensus 99 ~~lv~e~~~gg~L~~~l~~~-~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~ 177 (477)
.|+||||+++++|.+++... +.+++.++..++.|++.||.|||+.|++||||||+||++ +.++.+||+|||++...
T Consensus 81 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nili---~~~~~~kl~dfg~~~~~ 157 (268)
T cd05063 81 AMIITEYMENGALDKYLRDHDGEFSSYQLVGMLRGIAAGMKYLSDMNYVHRDLAARNILV---NSNLECKVSDFGLSRVL 157 (268)
T ss_pred cEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEE---cCCCcEEECCCccceec
Confidence 99999999999999998764 578999999999999999999999999999999999999 67788999999998765
Q ss_pred CCCcc--ee--cccccccccchhhhh-hhcCCccchHhHHHHHHHHhh-CCCCCCCCChhhHHHHHHcCCccCCCCCCCC
Q 042823 178 EEGQV--YR--DIVGSGFYIAPEVLR-RRYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQGEIDFDTDPWPS 251 (477)
Q Consensus 178 ~~~~~--~~--~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~l~t-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 251 (477)
..... .. ....++.|+|||++. +.++.++|||||||++|+|++ |..||...+.......+..+. .. +....
T Consensus 158 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~~~~~~i~~~~-~~--~~~~~ 234 (268)
T cd05063 158 EDDPEGTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSNHEVMKAINDGF-RL--PAPMD 234 (268)
T ss_pred ccccccceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhcCC-CC--CCCCC
Confidence 43221 11 112345799999986 468899999999999999997 999998877777776665542 11 12235
Q ss_pred CCHHHHHHHHHhcccCccccCCHHHHhc
Q 042823 252 ISSTAKDLVRRMLTKDPKRRITAAQVLE 279 (477)
Q Consensus 252 ~~~~~~~li~~~l~~dp~~R~s~~~~l~ 279 (477)
+++.+.+++.+||+.+|++||++.++++
T Consensus 235 ~~~~~~~li~~c~~~~p~~Rp~~~~i~~ 262 (268)
T cd05063 235 CPSAVYQLMLQCWQQDRARRPRFVDIVN 262 (268)
T ss_pred CCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence 7899999999999999999999999975
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored |
| >cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.1e-40 Score=309.67 Aligned_cols=250 Identities=20% Similarity=0.304 Sum_probs=209.0
Q ss_pred ccccccccccccCCeEEEEEEEcc-----CCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCC
Q 042823 23 LHYFFGRMLGRGQFGVSYLCTENS-----TNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDET 97 (477)
Q Consensus 23 ~~Y~~~~~iG~G~~g~V~~~~~~~-----~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~ 97 (477)
++|++.+.||+|+||.||+|.++. ..+.+++|.+..... ......+.+|++++.++ +||||+++++++.+..
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~--~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~ 81 (275)
T cd05046 5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKD--ENLQSEFRRELDMFRKL-SHKNVVRLLGLCREAE 81 (275)
T ss_pred HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccc--hHHHHHHHHHHHHHHhc-CCcceeeeEEEECCCC
Confidence 679999999999999999999754 346788988754321 22456788999999999 7999999999999999
Q ss_pred eEEEEEeccCCCchHHHHHHcC---------CCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEE
Q 042823 98 AVHVVMELCEGGDLFDRIIAKG---------YNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKV 168 (477)
Q Consensus 98 ~~~lv~e~~~gg~L~~~l~~~~---------~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl 168 (477)
..|+||||+++|+|.+++.... .+++..+..++.|++.||.|||++||+||||||+||++ +..+.+++
T Consensus 82 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dlkp~Nili---~~~~~~~l 158 (275)
T cd05046 82 PHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNARFVHRDLAARNCLV---SSQREVKV 158 (275)
T ss_pred cceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcCcccCcCccceEEE---eCCCcEEE
Confidence 9999999999999999998765 68999999999999999999999999999999999999 66788999
Q ss_pred eecCCccccCCCc--ceecccccccccchhhhh-hhcCCccchHhHHHHHHHHhh-CCCCCCCCChhhHHHHHHcCCccC
Q 042823 169 TDFGSALLFEEGQ--VYRDIVGSGFYIAPEVLR-RRYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQGEIDF 244 (477)
Q Consensus 169 ~Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~l~t-g~~pf~~~~~~~~~~~i~~~~~~~ 244 (477)
+|||++....... ......+++.|+|||.+. +.++.++||||||+++|+|++ |..||...........+..+...+
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~~~~~~~~~~~~~~ 238 (275)
T cd05046 159 SLLSLSKDVYNSEYYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDEEVLNRLQAGKLEL 238 (275)
T ss_pred cccccccccCcccccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccchHHHHHHHHcCCcCC
Confidence 9999886443221 123345677899999876 457889999999999999998 889998777777777666555444
Q ss_pred CCCCCCCCCHHHHHHHHHhcccCccccCCHHHHhcC
Q 042823 245 DTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEH 280 (477)
Q Consensus 245 ~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h 280 (477)
.. ...++..+.+++.+||+.+|++|||+.+++.+
T Consensus 239 ~~--~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~ 272 (275)
T cd05046 239 PV--PEGCPSRLYKLMTRCWAVNPKDRPSFSELVSA 272 (275)
T ss_pred CC--CCCCCHHHHHHHHHHcCCCcccCCCHHHHHHH
Confidence 32 24678999999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s |
| >cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-39 Score=305.85 Aligned_cols=242 Identities=21% Similarity=0.279 Sum_probs=201.0
Q ss_pred ccccccCCeEEEEEEEcc-CCc--eEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEec
Q 042823 29 RMLGRGQFGVSYLCTENS-TNR--PYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVVMEL 105 (477)
Q Consensus 29 ~~iG~G~~g~V~~~~~~~-~~~--~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~lv~e~ 105 (477)
+.||+|++|.||+|.+.. .++ .||+|.+...... .....+.+|+.++.++ +||||+++++.+.. ..+++||||
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~-~~~~~v~e~ 76 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLS--DIMDDFLKEAAIMHSL-DHENLIRLYGVVLT-HPLMMVTEL 76 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccH--HHHHHHHHHHHHHhhc-CCCCccceeEEEcC-CeEEEEEEe
Confidence 468999999999999865 333 6899988654332 4567788999999999 79999999999988 899999999
Q ss_pred cCCCchHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCCCcc-
Q 042823 106 CEGGDLFDRIIAKG--YNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQV- 182 (477)
Q Consensus 106 ~~gg~L~~~l~~~~--~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~- 182 (477)
+++|+|.+++.... .+++..+..++.|++.||.|||++|++||||||+||++ +.++.+||+|||++........
T Consensus 77 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~di~p~nil~---~~~~~~kl~dfg~~~~~~~~~~~ 153 (257)
T cd05040 77 APLGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESKRFIHRDLAARNILL---ASDDKVKIGDFGLMRALPQNEDH 153 (257)
T ss_pred cCCCcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhCCccccccCcccEEE---ecCCEEEeccccccccccccccc
Confidence 99999999998764 68999999999999999999999999999999999999 6678999999999876643211
Q ss_pred ---eecccccccccchhhhhh-hcCCccchHhHHHHHHHHhh-CCCCCCCCChhhHHHHHHcCCccCCCCCCCCCCHHHH
Q 042823 183 ---YRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAK 257 (477)
Q Consensus 183 ---~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~t-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 257 (477)
.....++..|+|||.+.+ .++.++|||||||++|+|++ |..||...+..+....+......... ...+|..+.
T Consensus 154 ~~~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 231 (257)
T cd05040 154 YVMEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQILKKIDKEGERLER--PEACPQDIY 231 (257)
T ss_pred eecccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCcCCC--CccCCHHHH
Confidence 112356778999999864 68999999999999999998 99999877777666665542222221 135789999
Q ss_pred HHHHHhcccCccccCCHHHHhc
Q 042823 258 DLVRRMLTKDPKRRITAAQVLE 279 (477)
Q Consensus 258 ~li~~~l~~dp~~R~s~~~~l~ 279 (477)
+++.+||+.+|++|||+.++++
T Consensus 232 ~li~~~l~~~p~~Rps~~~~~~ 253 (257)
T cd05040 232 NVMLQCWAHNPADRPTFAALRE 253 (257)
T ss_pred HHHHHHCCCCcccCCCHHHHHH
Confidence 9999999999999999999975
|
Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and |
| >cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-39 Score=307.66 Aligned_cols=248 Identities=21% Similarity=0.247 Sum_probs=205.4
Q ss_pred cccccccccccccCCeEEEEEEEccCCc----eEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCC
Q 042823 22 MLHYFFGRMLGRGQFGVSYLCTENSTNR----PYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDET 97 (477)
Q Consensus 22 ~~~Y~~~~~iG~G~~g~V~~~~~~~~~~----~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~ 97 (477)
..+|++.+.||+|+||+||+|.++.+|. .+|+|.+..... ......+.+|+.++..+ +||||+++++++.. .
T Consensus 6 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~--~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~-~ 81 (279)
T cd05057 6 ETELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETS--PKANKEILDEAYVMASV-DHPHVVRLLGICLS-S 81 (279)
T ss_pred HHHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCC--HHHHHHHHHHHHHHHhC-CCCCcceEEEEEec-C
Confidence 4679999999999999999999876665 588887754432 33456788899999999 79999999999987 7
Q ss_pred eEEEEEeccCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccc
Q 042823 98 AVHVVMELCEGGDLFDRIIAK-GYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALL 176 (477)
Q Consensus 98 ~~~lv~e~~~gg~L~~~l~~~-~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~ 176 (477)
..++||||+++|+|.+++... ..+++..+..++.|++.||.|||+.|++||||||+||++ +..+.+||+|||.+..
T Consensus 82 ~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~di~p~nil~---~~~~~~kL~dfg~~~~ 158 (279)
T cd05057 82 QVQLITQLMPLGCLLDYVRNHKDNIGSQYLLNWCVQIAKGMSYLEEKRLVHRDLAARNVLV---KTPQHVKITDFGLAKL 158 (279)
T ss_pred ceEEEEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEecccCcceEEE---cCCCeEEECCCccccc
Confidence 889999999999999999874 468999999999999999999999999999999999999 6778899999999976
Q ss_pred cCCCccee---cccccccccchhhhh-hhcCCccchHhHHHHHHHHhh-CCCCCCCCChhhHHHHHHcCCccCCCCCCCC
Q 042823 177 FEEGQVYR---DIVGSGFYIAPEVLR-RRYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQGEIDFDTDPWPS 251 (477)
Q Consensus 177 ~~~~~~~~---~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~l~t-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 251 (477)
........ ...++..|+|||.+. +.++.++|+||+||++|++++ |..||.+....+....+..+... +. .+.
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~-~~--~~~ 235 (279)
T cd05057 159 LDVDEKEYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAVEIPDLLEKGERL-PQ--PPI 235 (279)
T ss_pred ccCcccceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhCCCCC-CC--CCC
Confidence 64332211 122356799999886 468899999999999999998 99999887777766666654322 11 134
Q ss_pred CCHHHHHHHHHhcccCccccCCHHHHhc
Q 042823 252 ISSTAKDLVRRMLTKDPKRRITAAQVLE 279 (477)
Q Consensus 252 ~~~~~~~li~~~l~~dp~~R~s~~~~l~ 279 (477)
.+..+.+++.+||..+|..|||+.++++
T Consensus 236 ~~~~~~~~~~~~l~~~p~~Rp~~~~l~~ 263 (279)
T cd05057 236 CTIDVYMVLVKCWMIDAESRPTFKELIN 263 (279)
T ss_pred CCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 6789999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea |
| >cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-39 Score=304.72 Aligned_cols=249 Identities=18% Similarity=0.276 Sum_probs=205.8
Q ss_pred cccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCC
Q 042823 18 YEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDET 97 (477)
Q Consensus 18 ~~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~ 97 (477)
|+...++|++.+.||+|+||.||+|.+. .+..+|+|.+... ......+.+|+.+++.+ +||||+++++++.. .
T Consensus 1 ~~~~~~~~~~~~~lg~g~~~~vy~~~~~-~~~~~~iK~~~~~----~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~-~ 73 (260)
T cd05073 1 WEIPRESLKLEKKLGAGQFGEVWMATYN-KHTKVAVKTMKPG----SMSVEAFLAEANVMKTL-QHDKLVKLHAVVTK-E 73 (260)
T ss_pred CcccccceeEEeEecCccceEEEEEEec-CCccEEEEecCCC----hhHHHHHHHHHHHHHhc-CCCCcceEEEEEcC-C
Confidence 4567789999999999999999999864 4567999987543 12345688899999998 79999999999987 7
Q ss_pred eEEEEEeccCCCchHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCcc
Q 042823 98 AVHVVMELCEGGDLFDRIIAK--GYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSAL 175 (477)
Q Consensus 98 ~~~lv~e~~~gg~L~~~l~~~--~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~ 175 (477)
..|++|||+++|+|.+++... ..++...+..++.|++.||.|||+.|++||||||+||++ +..+.+||+|||.+.
T Consensus 74 ~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~ni~i---~~~~~~~l~d~~~~~ 150 (260)
T cd05073 74 PIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILV---SASLVCKIADFGLAR 150 (260)
T ss_pred CeEEEEEeCCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEE---cCCCcEEECCCccee
Confidence 789999999999999999763 356888899999999999999999999999999999999 778899999999887
Q ss_pred ccCCCcc--eecccccccccchhhhhh-hcCCccchHhHHHHHHHHhh-CCCCCCCCChhhHHHHHHcCCccCCCCCCCC
Q 042823 176 LFEEGQV--YRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQGEIDFDTDPWPS 251 (477)
Q Consensus 176 ~~~~~~~--~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~t-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 251 (477)
....... .....++..|+|||++.. .++.++|+|||||++|+++| |.+||.+.+.......+..+.. .+..+.
T Consensus 151 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~~---~~~~~~ 227 (260)
T cd05073 151 VIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYR---MPRPEN 227 (260)
T ss_pred eccCCCcccccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhCCCC---CCCccc
Confidence 6543221 122345667999999864 57889999999999999999 9999988777666666655422 122356
Q ss_pred CCHHHHHHHHHhcccCccccCCHHHHhc
Q 042823 252 ISSTAKDLVRRMLTKDPKRRITAAQVLE 279 (477)
Q Consensus 252 ~~~~~~~li~~~l~~dp~~R~s~~~~l~ 279 (477)
.+.++.+++.+||+.+|++||++.++++
T Consensus 228 ~~~~~~~~i~~~l~~~p~~Rp~~~~l~~ 255 (260)
T cd05073 228 CPEELYNIMMRCWKNRPEERPTFEYIQS 255 (260)
T ss_pred CCHHHHHHHHHHcccCcccCcCHHHHHH
Confidence 8899999999999999999999998864
|
Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa |
| >cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-39 Score=307.11 Aligned_cols=250 Identities=22% Similarity=0.299 Sum_probs=204.9
Q ss_pred ccccccccccccccCCeEEEEEEEccC---CceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCC
Q 042823 21 VMLHYFFGRMLGRGQFGVSYLCTENST---NRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDET 97 (477)
Q Consensus 21 ~~~~Y~~~~~iG~G~~g~V~~~~~~~~---~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~ 97 (477)
-..+|.+.+.||+|+||.||+|.+... ...||+|....... ......+.+|+.++..+ +||||+++++++.+ .
T Consensus 4 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~--~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~-~ 79 (270)
T cd05056 4 QREDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTS--PSVREKFLQEAYIMRQF-DHPHIVKLIGVITE-N 79 (270)
T ss_pred chhhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCC--HHHHHHHHHHHHHHHhC-CCCchhceeEEEcC-C
Confidence 345799999999999999999987644 35689998754332 23456788999999999 79999999999875 4
Q ss_pred eEEEEEeccCCCchHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccc
Q 042823 98 AVHVVMELCEGGDLFDRIIAKG-YNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALL 176 (477)
Q Consensus 98 ~~~lv~e~~~gg~L~~~l~~~~-~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~ 176 (477)
..|+||||+++|+|.+++.... .++...+..++.|++.||.|||+.|++||||||+||++ +..+.+||+|||++..
T Consensus 80 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~H~dl~p~nili---~~~~~~~l~d~g~~~~ 156 (270)
T cd05056 80 PVWIVMELAPLGELRSYLQVNKYSLDLASLILYSYQLSTALAYLESKRFVHRDIAARNVLV---SSPDCVKLGDFGLSRY 156 (270)
T ss_pred CcEEEEEcCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccChheEEE---ecCCCeEEccCceeee
Confidence 5789999999999999998744 58999999999999999999999999999999999999 6678899999999876
Q ss_pred cCCCccee--cccccccccchhhhhh-hcCCccchHhHHHHHHHHhh-CCCCCCCCChhhHHHHHHcCCccCCCCCCCCC
Q 042823 177 FEEGQVYR--DIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQGEIDFDTDPWPSI 252 (477)
Q Consensus 177 ~~~~~~~~--~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~t-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 252 (477)
........ ...+++.|+|||.+.. .++.++|||||||++|+|++ |..||......+....+..+... ...+.+
T Consensus 157 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~---~~~~~~ 233 (270)
T cd05056 157 LEDESYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDVIGRIENGERL---PMPPNC 233 (270)
T ss_pred cccccceecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCcC---CCCCCC
Confidence 54332211 2234567999998864 58899999999999999986 99999887777666666554322 223567
Q ss_pred CHHHHHHHHHhcccCccccCCHHHHhcC
Q 042823 253 SSTAKDLVRRMLTKDPKRRITAAQVLEH 280 (477)
Q Consensus 253 ~~~~~~li~~~l~~dp~~R~s~~~~l~h 280 (477)
|+.+.+++.+||..+|++|||+.+++..
T Consensus 234 ~~~~~~li~~~l~~~P~~Rpt~~~~~~~ 261 (270)
T cd05056 234 PPTLYSLMTKCWAYDPSKRPRFTELKAQ 261 (270)
T ss_pred CHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 8999999999999999999999998753
|
Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions |
| >cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-39 Score=306.36 Aligned_cols=252 Identities=26% Similarity=0.402 Sum_probs=208.8
Q ss_pred cccccccccccCCeEEEEEEEcc-CCceEEEEEeecCCc-------cchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEe
Q 042823 24 HYFFGRMLGRGQFGVSYLCTENS-TNRPYACKSIAKKPK-------MRLAENDMIRREIQIRLYLSGQPNVVEFKSTYED 95 (477)
Q Consensus 24 ~Y~~~~~iG~G~~g~V~~~~~~~-~~~~~aiK~~~~~~~-------~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~ 95 (477)
.|++.+.||+|+||.||+|.++. +++.+|+|.+..... ........+.+|+.++.+..+||||+++++++..
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 80 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE 80 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence 48899999999999999999987 788999998864321 1223445567788888775589999999999999
Q ss_pred CCeEEEEEeccCCCchHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHH-cCCeeccCCCCceeeeecCCCCCEEEee
Q 042823 96 ETAVHVVMELCEGGDLFDRIIA----KGYNSERDAATVLRAIVNAVNVCHS-MGVMHRDLKPENFSFISRDDNALLKVTD 170 (477)
Q Consensus 96 ~~~~~lv~e~~~gg~L~~~l~~----~~~~~~~~~~~i~~qil~~L~~lH~-~~ivH~dlkp~Nil~~~~~~~~~~kl~D 170 (477)
++..++||||++|++|.+++.. ...+++..++.++.|++.||.|||+ .+++||||+|+||++ +..+.+||+|
T Consensus 81 ~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~i~H~dl~~~nil~---~~~~~~~l~d 157 (269)
T cd08528 81 NDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKRIVHRDLTPNNIML---GEDDKVTITD 157 (269)
T ss_pred CCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCceeecCCCHHHEEE---CCCCcEEEec
Confidence 9999999999999999988743 3468999999999999999999996 689999999999999 6778899999
Q ss_pred cCCccccCCCcceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCC
Q 042823 171 FGSALLFEEGQVYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPW 249 (477)
Q Consensus 171 fg~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~ 249 (477)
||.+.............|+..|+|||.+.+ .++.++|+||||+++|+|++|.+||...........+...... +...
T Consensus 158 fg~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~~~~--~~~~ 235 (269)
T cd08528 158 FGLAKQKQPESKLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNMLSLATKIVEAVYE--PLPE 235 (269)
T ss_pred ccceeecccccccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCHHHHHHHHhhccCC--cCCc
Confidence 999987655444445678999999999864 5789999999999999999999999877666666555554332 1122
Q ss_pred CCCCHHHHHHHHHhcccCccccCCHHHHhcC
Q 042823 250 PSISSTAKDLVRRMLTKDPKRRITAAQVLEH 280 (477)
Q Consensus 250 ~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h 280 (477)
..+++.+.+++.+||+.||++||++.++..+
T Consensus 236 ~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~ 266 (269)
T cd08528 236 GMYSEDVTDVITSCLTPDAEARPDIIQVSAM 266 (269)
T ss_pred ccCCHHHHHHHHHHCCCCCccCCCHHHHHHH
Confidence 3578999999999999999999999998653
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. |
| >cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-39 Score=301.24 Aligned_cols=241 Identities=23% Similarity=0.336 Sum_probs=199.0
Q ss_pred ccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEeccCC
Q 042823 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVVMELCEG 108 (477)
Q Consensus 29 ~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~lv~e~~~g 108 (477)
++||+|+||.||+|... +++.+|+|.+.... .......+.+|+.++..+ +||||+++++++......++||||++|
T Consensus 1 ~~ig~g~~g~vy~~~~~-~~~~~a~K~~~~~~--~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~ 76 (250)
T cd05085 1 ELLGKGNFGEVFKGTLK-DKTPVAVKTCKEDL--PQELKIKFLSEARILKQY-DHPNIVKLIGVCTQRQPIYIVMELVPG 76 (250)
T ss_pred CccCCCCCceEEEEEec-CCcEEEEEecCCcC--CHHHHHHHHHHHHHHHhC-CCCCcCeEEEEEecCCccEEEEECCCC
Confidence 46999999999999864 68889999876432 223344678899999998 799999999999999999999999999
Q ss_pred CchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCCCcce--ec
Q 042823 109 GDLFDRIIAK-GYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVY--RD 185 (477)
Q Consensus 109 g~L~~~l~~~-~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~--~~ 185 (477)
++|.+++... ..+++..+..++.|++.||.|||++|++||||||+||++ +..+.+||+|||++......... ..
T Consensus 77 ~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~~H~dl~p~nili---~~~~~~~l~d~g~~~~~~~~~~~~~~~ 153 (250)
T cd05085 77 GDFLSFLRKKKDELKTKQLVKFALDAAAGMAYLESKNCIHRDLAARNCLV---GENNVLKISDFGMSRQEDDGIYSSSGL 153 (250)
T ss_pred CcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccChheEEE---cCCCeEEECCCccceeccccccccCCC
Confidence 9999988764 457899999999999999999999999999999999999 67788999999988654332211 11
Q ss_pred ccccccccchhhhh-hhcCCccchHhHHHHHHHHhh-CCCCCCCCChhhHHHHHHcCCccCCCCCCCCCCHHHHHHHHHh
Q 042823 186 IVGSGFYIAPEVLR-RRYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRM 263 (477)
Q Consensus 186 ~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~l~t-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~ 263 (477)
..+++.|+|||++. +.++.++||||||+++|++++ |..||...........+..+... ...+.++..+.+++.+|
T Consensus 154 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~li~~~ 230 (250)
T cd05085 154 KQIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQAREQVEKGYRM---SCPQKCPDDVYKVMQRC 230 (250)
T ss_pred CCCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHcCCCC---CCCCCCCHHHHHHHHHH
Confidence 23456799999986 458889999999999999998 99999887766666665544221 22346789999999999
Q ss_pred cccCccccCCHHHHhc
Q 042823 264 LTKDPKRRITAAQVLE 279 (477)
Q Consensus 264 l~~dp~~R~s~~~~l~ 279 (477)
|+.+|++|||+.++++
T Consensus 231 l~~~p~~Rp~~~~l~~ 246 (250)
T cd05085 231 WDYKPENRPKFSELQK 246 (250)
T ss_pred cccCcccCCCHHHHHH
Confidence 9999999999999875
|
Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c |
| >cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-39 Score=303.82 Aligned_cols=246 Identities=23% Similarity=0.365 Sum_probs=205.4
Q ss_pred ccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 042823 23 LHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVV 102 (477)
Q Consensus 23 ~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~lv 102 (477)
.+|++.+.||+|+||.||+|.+. .+..+|+|++..... ....+.+|+++++.+ +||||+++++++......|+|
T Consensus 4 ~~~~~~~~ig~g~~g~v~~~~~~-~~~~~~~k~~~~~~~----~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~~v 77 (256)
T cd05112 4 SELTLVQEIGSGQFGLVWLGYWL-EKRKVAIKTIREGAM----SEEDFIEEAQVMMKL-SHPKLVQLYGVCTERSPICLV 77 (256)
T ss_pred hHeEEEeeecCcccceEEEEEEe-CCCeEEEEECCCCCC----CHHHHHHHHHHHHhC-CCCCeeeEEEEEccCCceEEE
Confidence 47889999999999999999875 467899998864322 234678899999999 799999999999999999999
Q ss_pred EeccCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCCCc
Q 042823 103 MELCEGGDLFDRIIAK-GYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQ 181 (477)
Q Consensus 103 ~e~~~gg~L~~~l~~~-~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~ 181 (477)
|||+++++|.+++... +.+++..+..++.|++.||.|||+.+++||||||+||++ +.++.+||+|||.+.......
T Consensus 78 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~dl~p~ni~i---~~~~~~~l~d~g~~~~~~~~~ 154 (256)
T cd05112 78 FEFMEHGCLSDYLRAQRGKFSQETLLGMCLDVCEGMAYLESSNVIHRDLAARNCLV---GENQVVKVSDFGMTRFVLDDQ 154 (256)
T ss_pred EEcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCccccccccceEEE---cCCCeEEECCCcceeecccCc
Confidence 9999999999998764 568899999999999999999999999999999999999 677889999999887553322
Q ss_pred c--eecccccccccchhhhh-hhcCCccchHhHHHHHHHHhh-CCCCCCCCChhhHHHHHHcCCccCCCCCCCCCCHHHH
Q 042823 182 V--YRDIVGSGFYIAPEVLR-RRYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAK 257 (477)
Q Consensus 182 ~--~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~l~t-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 257 (477)
. .....++..|+|||.+. +.++.++||||+|+++|+|++ |.+||...........+..+.....+ ...+..+.
T Consensus 155 ~~~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ 231 (256)
T cd05112 155 YTSSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNSEVVETINAGFRLYKP---RLASQSVY 231 (256)
T ss_pred ccccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHhCCCCCCCC---CCCCHHHH
Confidence 1 11233456899999986 468889999999999999998 99999887777777776654322221 23689999
Q ss_pred HHHHHhcccCccccCCHHHHhcC
Q 042823 258 DLVRRMLTKDPKRRITAAQVLEH 280 (477)
Q Consensus 258 ~li~~~l~~dp~~R~s~~~~l~h 280 (477)
+|+.+||+.+|++|||+.+++++
T Consensus 232 ~l~~~~l~~~p~~Rp~~~~~l~~ 254 (256)
T cd05112 232 ELMQHCWKERPEDRPSFSLLLHQ 254 (256)
T ss_pred HHHHHHcccChhhCCCHHHHHHh
Confidence 99999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ |
| >cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-39 Score=311.09 Aligned_cols=252 Identities=19% Similarity=0.253 Sum_probs=200.1
Q ss_pred cccccccccccccCCeEEEEEEEcc----------------CCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCC
Q 042823 22 MLHYFFGRMLGRGQFGVSYLCTENS----------------TNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPN 85 (477)
Q Consensus 22 ~~~Y~~~~~iG~G~~g~V~~~~~~~----------------~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpn 85 (477)
.++|++.+.||+|+||.||+|.+.. ++..+|+|.+.... .......+.+|+.+++.+ +|||
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~--~~~~~~~~~~E~~~l~~l-~~~~ 80 (296)
T cd05095 4 RKRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDA--NKNARNDFLKEIKIMSRL-KDPN 80 (296)
T ss_pred hhhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccC--CHHHHHHHHHHHHHHHhC-CCCC
Confidence 4679999999999999999986532 34568999886432 233456788999999999 7999
Q ss_pred eeEEEEEEEeCCeEEEEEeccCCCchHHHHHHcC-----------CCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCc
Q 042823 86 VVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKG-----------YNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPEN 154 (477)
Q Consensus 86 iv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~-----------~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~N 154 (477)
|+++++++......|+||||+++|+|.+++.... .+++.++..++.|++.||.|||++|++||||||+|
T Consensus 81 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dlkp~N 160 (296)
T cd05095 81 IIRLLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLNFVHRDLATRN 160 (296)
T ss_pred cceEEEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCCeecccCChhe
Confidence 9999999999999999999999999999987643 35677899999999999999999999999999999
Q ss_pred eeeeecCCCCCEEEeecCCccccCCCcc---eecccccccccchhhhh-hhcCCccchHhHHHHHHHHhh--CCCCCCCC
Q 042823 155 FSFISRDDNALLKVTDFGSALLFEEGQV---YRDIVGSGFYIAPEVLR-RRYGKEIDIWSAGVILYILLS--GVPPFWAE 228 (477)
Q Consensus 155 il~~~~~~~~~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~l~t--g~~pf~~~ 228 (477)
|++ +.++.++|+|||++........ .....+++.|+|||+.. +.++.++|||||||++|+|++ |..||...
T Consensus 161 ili---~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~ 237 (296)
T cd05095 161 CLV---GKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQL 237 (296)
T ss_pred EEE---cCCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCcccc
Confidence 999 6678899999999876533221 11223467899999865 568999999999999999998 78899776
Q ss_pred ChhhHHHHHHc----CCccCCCCCCCCCCHHHHHHHHHhcccCccccCCHHHHhc
Q 042823 229 TKKGTYDAILQ----GEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLE 279 (477)
Q Consensus 229 ~~~~~~~~i~~----~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~ 279 (477)
+..+....... .......+..+.+++.+.+|+.+||+.||++|||+.++++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~ 292 (296)
T cd05095 238 SDEQVIENTGEFFRDQGRQVYLPKPALCPDSLYKLMLSCWRRNAKERPSFQEIHA 292 (296)
T ss_pred ChHHHHHHHHHHHhhccccccCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence 65554433211 0011111122457899999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit |
| >cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-40 Score=304.61 Aligned_cols=228 Identities=25% Similarity=0.358 Sum_probs=187.8
Q ss_pred cCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEeccCCCchHH
Q 042823 34 GQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFD 113 (477)
Q Consensus 34 G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~ 113 (477)
|.+|.||+|+++.+++.||+|.+.+... ..+|...+... .||||+++++++.....+|+||||++||+|.+
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~~--------~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~ 74 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSSE--------YSRERLTIIPH-CVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWS 74 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchhh--------hhhHHHHHHhc-CCCceeehhhheecCCeEEEEEecCCCCCHHH
Confidence 8899999999999999999999865421 12333333444 59999999999999999999999999999999
Q ss_pred HHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCCCcceeccccccccc
Q 042823 114 RIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYI 193 (477)
Q Consensus 114 ~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~ 193 (477)
++.+...+++..+..++.|++.||.|||+.|++||||||+||++ +..+.++++|||.+...... .....++..|+
T Consensus 75 ~l~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nil~---~~~~~~~l~df~~~~~~~~~--~~~~~~~~~y~ 149 (237)
T cd05576 75 HISKFLNIPEECVKRWAAEMVVALDALHREGIVCRDLNPNNILL---DDRGHIQLTYFSRWSEVEDS--CDGEAVENMYC 149 (237)
T ss_pred HHHHhcCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEE---cCCCCEEEecccchhccccc--cccCCcCcccc
Confidence 99888889999999999999999999999999999999999999 67788999999987655432 23345677899
Q ss_pred chhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCCCCHHHHHHHHHhcccCccccC
Q 042823 194 APEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRI 272 (477)
Q Consensus 194 aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~ 272 (477)
|||.+.+ .++.++|+||+|+++|+|++|..|+...... + ....... ..+.+++.++++|.+||+.||++||
T Consensus 150 aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~-----~-~~~~~~~--~~~~~~~~~~~li~~~l~~dp~~R~ 221 (237)
T cd05576 150 APEVGGISEETEACDWWSLGAILFELLTGKTLVECHPSG-----I-NTHTTLN--IPEWVSEEARSLLQQLLQFNPTERL 221 (237)
T ss_pred CCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchh-----c-ccccccC--CcccCCHHHHHHHHHHccCCHHHhc
Confidence 9999864 5889999999999999999999987543211 0 0011111 1135789999999999999999999
Q ss_pred CH-----HHHhcCccc
Q 042823 273 TA-----AQVLEHPWL 283 (477)
Q Consensus 273 s~-----~~~l~h~~~ 283 (477)
++ .++++||||
T Consensus 222 ~~~~~~~~~~~~h~~~ 237 (237)
T cd05576 222 GAGVAGVEDIKSHPFF 237 (237)
T ss_pred CCCccchHHHHcCCCC
Confidence 85 999999997
|
Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha |
| >cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase) | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-39 Score=307.26 Aligned_cols=249 Identities=16% Similarity=0.187 Sum_probs=204.5
Q ss_pred cccccccccccccCCeEEEEEEEcc----CCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEe-C
Q 042823 22 MLHYFFGRMLGRGQFGVSYLCTENS----TNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYED-E 96 (477)
Q Consensus 22 ~~~Y~~~~~iG~G~~g~V~~~~~~~----~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~-~ 96 (477)
.++|++.+.||+|+||.||+|.+.. ++..|++|++... ........+.+|+.++..+ +||||+++++++.. +
T Consensus 5 ~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~--~~~~~~~~~~~e~~~l~~l-~h~ni~~~~~~~~~~~ 81 (280)
T cd05043 5 RDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDH--ASEIQVTLLLQESCLLYGL-SHQNILPILHVCIEDG 81 (280)
T ss_pred hhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCC--CCHHHHHHHHHHHHHHHhC-CCCCCCeEEEEEecCC
Confidence 4689999999999999999999875 3678999987533 2334566788999999999 79999999998765 5
Q ss_pred CeEEEEEeccCCCchHHHHHHc--------CCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEE
Q 042823 97 TAVHVVMELCEGGDLFDRIIAK--------GYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKV 168 (477)
Q Consensus 97 ~~~~lv~e~~~gg~L~~~l~~~--------~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl 168 (477)
...++++||+++|+|.+++... ..+++..+..++.|++.||.|||+++++||||||+||++ +..+.+||
T Consensus 82 ~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~p~nil~---~~~~~~kl 158 (280)
T cd05043 82 EPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRGVIHKDIAARNCVI---DEELQVKI 158 (280)
T ss_pred CCCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCHhhEEE---cCCCcEEE
Confidence 7789999999999999998763 357899999999999999999999999999999999999 67789999
Q ss_pred eecCCccccCCCcce---ecccccccccchhhhhh-hcCCccchHhHHHHHHHHhh-CCCCCCCCChhhHHHHHHcCCcc
Q 042823 169 TDFGSALLFEEGQVY---RDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQGEID 243 (477)
Q Consensus 169 ~Dfg~a~~~~~~~~~---~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~t-g~~pf~~~~~~~~~~~i~~~~~~ 243 (477)
+|||+++...+.... ....++..|+|||++.+ .++.++|||||||++|++++ |.+||......+....+..+. .
T Consensus 159 ~d~g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~-~ 237 (280)
T cd05043 159 TDNALSRDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDPFEMAAYLKDGY-R 237 (280)
T ss_pred CCCCCcccccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCHHHHHHHHHcCC-C
Confidence 999999765432211 12345667999999864 58899999999999999999 999998776655555444432 2
Q ss_pred CCCCCCCCCCHHHHHHHHHhcccCccccCCHHHHhc
Q 042823 244 FDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLE 279 (477)
Q Consensus 244 ~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~ 279 (477)
.. ....+++.+.+++.+||..+|++|||+.++++
T Consensus 238 ~~--~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~ 271 (280)
T cd05043 238 LA--QPINCPDELFAVMACCWALDPEERPSFSQLVQ 271 (280)
T ss_pred CC--CCCcCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 22 22457899999999999999999999999974
|
Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It |
| >cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-40 Score=308.63 Aligned_cols=240 Identities=15% Similarity=0.190 Sum_probs=190.4
Q ss_pred ccccccCCeEEEEEEEccCCc-------eEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEE
Q 042823 29 RMLGRGQFGVSYLCTENSTNR-------PYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHV 101 (477)
Q Consensus 29 ~~iG~G~~g~V~~~~~~~~~~-------~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~l 101 (477)
+.||+|+||.||+|.++.++. .+|+|.+.... ....+.+.+|+.++..+ +||||+++++++..+...++
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~---~~~~~~~~~e~~~l~~~-~h~~iv~~~~~~~~~~~~~l 76 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSH---RNYSESFFEAASMMSQL-SHKHLVLNYGVCVCGDESIM 76 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcchh---HHHHHHHHHHHHHHHhC-CCCChhheeeEEEeCCCcEE
Confidence 469999999999999865543 37888764332 23345677888888888 79999999999999999999
Q ss_pred EEeccCCCchHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCC-----CCCEEEeecCCcc
Q 042823 102 VMELCEGGDLFDRIIAKG-YNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDD-----NALLKVTDFGSAL 175 (477)
Q Consensus 102 v~e~~~gg~L~~~l~~~~-~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~-----~~~~kl~Dfg~a~ 175 (477)
||||+++|+|.+++..++ .+++..+..++.||+.||.|||++||+||||||+||++...+. ...++++|||.+.
T Consensus 77 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~ 156 (258)
T cd05078 77 VQEYVKFGSLDTYLKKNKNLINISWKLEVAKQLAWALHFLEDKGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISI 156 (258)
T ss_pred EEecCCCCcHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEecccccccCCCceEEeccccccc
Confidence 999999999999997654 5799999999999999999999999999999999999943321 2348999999886
Q ss_pred ccCCCcceecccccccccchhhhhh--hcCCccchHhHHHHHHHHhhCC-CCCCCCChhhHHHHHHcCCccCCCCCCCCC
Q 042823 176 LFEEGQVYRDIVGSGFYIAPEVLRR--RYGKEIDIWSAGVILYILLSGV-PPFWAETKKGTYDAILQGEIDFDTDPWPSI 252 (477)
Q Consensus 176 ~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~l~tg~-~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 252 (477)
..... ....+++.|+|||++.+ .++.++|||||||++|+|++|. +||........ ..+.......+ +..
T Consensus 157 ~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~~-~~~~~~~~~~~----~~~ 228 (258)
T cd05078 157 TVLPK---EILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQKK-LQFYEDRHQLP----APK 228 (258)
T ss_pred ccCCc---hhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHHHH-HHHHHccccCC----CCC
Confidence 55432 23467889999999874 4788999999999999999984 66655443332 22333322222 245
Q ss_pred CHHHHHHHHHhcccCccccCCHHHHhcC
Q 042823 253 SSTAKDLVRRMLTKDPKRRITAAQVLEH 280 (477)
Q Consensus 253 ~~~~~~li~~~l~~dp~~R~s~~~~l~h 280 (477)
+.++.+++.+||+.+|++|||+.++++.
T Consensus 229 ~~~~~~li~~~l~~~p~~Rps~~~il~~ 256 (258)
T cd05078 229 WTELANLINQCMDYEPDFRPSFRAIIRD 256 (258)
T ss_pred cHHHHHHHHHHhccChhhCCCHHHHHHh
Confidence 6889999999999999999999999863
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity |
| >cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-39 Score=300.37 Aligned_cols=241 Identities=24% Similarity=0.322 Sum_probs=199.8
Q ss_pred ccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEeccCC
Q 042823 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVVMELCEG 108 (477)
Q Consensus 29 ~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~lv~e~~~g 108 (477)
++||+|+||.||+|.+.. ++.||+|++...... .....+.+|+.+++++ +||||+++++++......|+||||++|
T Consensus 1 ~~lg~g~~g~v~~~~~~~-~~~v~~K~~~~~~~~--~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~~v~e~~~~ 76 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKG-NTEVAVKTCRSTLPP--DLKRKFLQEAEILKQY-DHPNIVKLIGVCVQKQPIYIVMELVPG 76 (251)
T ss_pred CccccCCCceEEEEEEeC-CCcEEEEeccccCCH--HHHHHHHHHHHHHHhC-CCCCeEEEEEEEecCCCeEEEEEcCCC
Confidence 479999999999999877 999999988654321 3456788999999999 799999999999999999999999999
Q ss_pred CchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCCCcce---e
Q 042823 109 GDLFDRIIAK-GYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVY---R 184 (477)
Q Consensus 109 g~L~~~l~~~-~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~---~ 184 (477)
++|.+++... ..++...+..++.+++.||.|||+++++||||+|+||++ +.++.+||+|||.+......... .
T Consensus 77 ~~l~~~l~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~di~p~nili---~~~~~~~l~d~g~~~~~~~~~~~~~~~ 153 (251)
T cd05041 77 GSLLTFLRKKKNRLTVKKLLQMSLDAAAGMEYLESKNCIHRDLAARNCLV---GENNVLKISDFGMSREEEGGIYTVSDG 153 (251)
T ss_pred CcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCEehhhcCcceEEE---cCCCcEEEeeccccccccCCcceeccc
Confidence 9999998763 567899999999999999999999999999999999999 77789999999998755422111 1
Q ss_pred cccccccccchhhhh-hhcCCccchHhHHHHHHHHhh-CCCCCCCCChhhHHHHHHcCCccCCCCCCCCCCHHHHHHHHH
Q 042823 185 DIVGSGFYIAPEVLR-RRYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRR 262 (477)
Q Consensus 185 ~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~l~t-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~ 262 (477)
...++..|+|||.+. +.++.++|+|||||++|+|+| |..||...........+.... .. ......+..+.+++.+
T Consensus 154 ~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~li~~ 230 (251)
T cd05041 154 LKQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQTRERIESGY-RM--PAPQLCPEEIYRLMLQ 230 (251)
T ss_pred cCcceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHHHHHHHHhcCC-CC--CCCccCCHHHHHHHHH
Confidence 122355699999886 468899999999999999999 899998777666555554432 11 1223578999999999
Q ss_pred hcccCccccCCHHHHhc
Q 042823 263 MLTKDPKRRITAAQVLE 279 (477)
Q Consensus 263 ~l~~dp~~R~s~~~~l~ 279 (477)
||..+|++|||+.++++
T Consensus 231 ~l~~~p~~Rp~~~ell~ 247 (251)
T cd05041 231 CWAYDPENRPSFSEIYN 247 (251)
T ss_pred HhccChhhCcCHHHHHH
Confidence 99999999999999986
|
Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k |
| >cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-39 Score=307.88 Aligned_cols=248 Identities=23% Similarity=0.333 Sum_probs=197.5
Q ss_pred cccccccccccCCeEEEEEEE----ccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeC--C
Q 042823 24 HYFFGRMLGRGQFGVSYLCTE----NSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDE--T 97 (477)
Q Consensus 24 ~Y~~~~~iG~G~~g~V~~~~~----~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~--~ 97 (477)
-|++.+.||+|+||.||+|.. +.++..||+|.+.... .......+.+|+.+++.+ .||||+++++++... .
T Consensus 5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~ 81 (284)
T cd05079 5 FLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPES--GGNHIADLKKEIEILRNL-YHENIVKYKGICTEDGGN 81 (284)
T ss_pred hhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccc--cHHHHHHHHHHHHHHHhC-CCCCeeeeeeEEecCCCC
Confidence 478999999999999999974 4578899999986432 223446788999999999 799999999998775 5
Q ss_pred eEEEEEeccCCCchHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccc
Q 042823 98 AVHVVMELCEGGDLFDRIIAKG-YNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALL 176 (477)
Q Consensus 98 ~~~lv~e~~~gg~L~~~l~~~~-~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~ 176 (477)
..++||||++|++|.+++.+.. .++..++..++.|++.||.|||++|++||||||+||++ +.++.+||+|||++..
T Consensus 82 ~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~~i~~aL~~lH~~gi~H~dlkp~Nil~---~~~~~~~l~dfg~~~~ 158 (284)
T cd05079 82 GIKLIMEFLPSGSLKEYLPRNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLV---ESEHQVKIGDFGLTKA 158 (284)
T ss_pred ceEEEEEccCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccchheEEE---cCCCCEEECCCccccc
Confidence 7899999999999999987653 57999999999999999999999999999999999999 6678899999999876
Q ss_pred cCCCcc----eecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCCh---------------hhHHHH
Q 042823 177 FEEGQV----YRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETK---------------KGTYDA 236 (477)
Q Consensus 177 ~~~~~~----~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~---------------~~~~~~ 236 (477)
...... .....++..|+|||++.+ .++.++|||||||++|+|+|+..|+..... ......
T Consensus 159 ~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (284)
T cd05079 159 IETDKEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRLVRV 238 (284)
T ss_pred cccCccceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHHHHHH
Confidence 543221 123456778999999764 588999999999999999998776533211 001111
Q ss_pred HHcCCccCCCCCCCCCCHHHHHHHHHhcccCccccCCHHHHhcC
Q 042823 237 ILQGEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEH 280 (477)
Q Consensus 237 i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h 280 (477)
+..+. . .+.+..+++.+.+|+.+||+.+|++|||+.+++++
T Consensus 239 ~~~~~-~--~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~ 279 (284)
T cd05079 239 LEEGK-R--LPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEG 279 (284)
T ss_pred HHcCc-c--CCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHH
Confidence 11111 1 12235688999999999999999999999999863
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a |
| >cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-39 Score=303.12 Aligned_cols=244 Identities=20% Similarity=0.251 Sum_probs=191.5
Q ss_pred ccccccCCeEEEEEEEc--cCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEecc
Q 042823 29 RMLGRGQFGVSYLCTEN--STNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVVMELC 106 (477)
Q Consensus 29 ~~iG~G~~g~V~~~~~~--~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~lv~e~~ 106 (477)
+.||+|+||.||+|.+. .++..+|+|.+..... ......+.+|+.++..+ +||||+++++++.+...+++||||+
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~--~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~ 77 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSAS--VQEQMKFLEEAQPYRSL-QHSNLLQCLGQCTEVTPYLLVMEFC 77 (269)
T ss_pred CcccccCCceEEEEEEcCCCCceEEEEEecCCCCC--hHHHHHHHHHHHHHHhC-CCCCEeeEEEEEcCCCCcEEEEECC
Confidence 46999999999999764 3557799998765432 23345678899999999 7999999999999999999999999
Q ss_pred CCCchHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCCCc
Q 042823 107 EGGDLFDRIIAKG-----YNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQ 181 (477)
Q Consensus 107 ~gg~L~~~l~~~~-----~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~ 181 (477)
++|+|.+++.... ..+...+..++.|++.||.|||+.|++||||||+||++ +..+.+||+|||.+.......
T Consensus 78 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dlkp~nil~---~~~~~~kL~dfg~~~~~~~~~ 154 (269)
T cd05087 78 PLGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNNFIHSDLALRNCLL---TADLTVKIGDYGLSHNKYKED 154 (269)
T ss_pred CCCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEE---cCCCcEEECCccccccccCcc
Confidence 9999999987532 34667788899999999999999999999999999999 667889999999886543222
Q ss_pred c---eecccccccccchhhhhh--------hcCCccchHhHHHHHHHHhh-CCCCCCCCChhhHHHHHHc-CCccCCCCC
Q 042823 182 V---YRDIVGSGFYIAPEVLRR--------RYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQ-GEIDFDTDP 248 (477)
Q Consensus 182 ~---~~~~~gt~~y~aPE~~~~--------~~~~~~DiwslG~il~~l~t-g~~pf~~~~~~~~~~~i~~-~~~~~~~~~ 248 (477)
. .....|++.|+|||++.+ .++.++||||+||++|+|++ |.+||......+....... .....+.+.
T Consensus 155 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (269)
T cd05087 155 YYVTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQVLTYTVREQQLKLPKPR 234 (269)
T ss_pred eeecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHHHHHHhhcccCCCCCCc
Confidence 1 122456788999999853 25789999999999999996 9999977655544333222 222222221
Q ss_pred C-CCCCHHHHHHHHHhcccCccccCCHHHHhc
Q 042823 249 W-PSISSTAKDLVRRMLTKDPKRRITAAQVLE 279 (477)
Q Consensus 249 ~-~~~~~~~~~li~~~l~~dp~~R~s~~~~l~ 279 (477)
. ...++.+.+++..|+ .+|++|||+.+++.
T Consensus 235 ~~~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~ 265 (269)
T cd05087 235 LKLPLSDRWYEVMQFCW-LQPEQRPSAEEVHL 265 (269)
T ss_pred cCCCCChHHHHHHHHHh-cCcccCCCHHHHHH
Confidence 1 246788999999998 68999999999974
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells |
| >cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-39 Score=302.50 Aligned_cols=240 Identities=23% Similarity=0.353 Sum_probs=200.8
Q ss_pred ccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 042823 23 LHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVV 102 (477)
Q Consensus 23 ~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~lv 102 (477)
++|++.+.||+|+||.||++. .+++.||+|.+.... ....+.+|+.++..+ +||||+++++++..+ ..|+|
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~--~~~~~~~iK~~~~~~-----~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~~-~~~~v 76 (254)
T cd05083 6 QKLTLGEIIGEGEFGAVLQGE--YTGQKVAVKNIKCDV-----TAQAFLEETAVMTKL-HHKNLVRLLGVILHN-GLYIV 76 (254)
T ss_pred HHceeeeeeccCCCCceEecc--cCCCceEEEeecCcc-----hHHHHHHHHHHHHhC-CCCCcCeEEEEEcCC-CcEEE
Confidence 579999999999999999986 478889999885421 235678899999998 799999999998765 47999
Q ss_pred EeccCCCchHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCCC
Q 042823 103 MELCEGGDLFDRIIAKG--YNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEG 180 (477)
Q Consensus 103 ~e~~~gg~L~~~l~~~~--~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~ 180 (477)
|||++|++|.+++.... .+++..+..++.|++.||.|||+.|++||||||+||++ +.++.+||+|||++......
T Consensus 77 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~H~dl~p~nili---~~~~~~kl~Dfg~~~~~~~~ 153 (254)
T cd05083 77 MELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESKKLVHRDLAARNILV---SEDGVAKVSDFGLARVGSMG 153 (254)
T ss_pred EECCCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEE---cCCCcEEECCCccceecccc
Confidence 99999999999997654 47899999999999999999999999999999999999 67788999999988754322
Q ss_pred cceecccccccccchhhhh-hhcCCccchHhHHHHHHHHhh-CCCCCCCCChhhHHHHHHcCCccCCCCCCCCCCHHHHH
Q 042823 181 QVYRDIVGSGFYIAPEVLR-RRYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKD 258 (477)
Q Consensus 181 ~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~l~t-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 258 (477)
......+..|+|||.+. +.++.++|+|||||++|+|++ |.+||......+....+.++.. ....+.+++.+.+
T Consensus 154 --~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~ 228 (254)
T cd05083 154 --VDNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKEVKECVEKGYR---MEPPEGCPADVYV 228 (254)
T ss_pred --CCCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhCCCC---CCCCCcCCHHHHH
Confidence 12234466799999986 468899999999999999997 9999988777766666655422 1223468899999
Q ss_pred HHHHhcccCccccCCHHHHhc
Q 042823 259 LVRRMLTKDPKRRITAAQVLE 279 (477)
Q Consensus 259 li~~~l~~dp~~R~s~~~~l~ 279 (477)
++.+||+.+|++||++++++.
T Consensus 229 li~~~l~~~p~~Rp~~~~l~~ 249 (254)
T cd05083 229 LMTSCWETEPKKRPSFHKLRE 249 (254)
T ss_pred HHHHHcCCChhhCcCHHHHHH
Confidence 999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki |
| >cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-39 Score=303.78 Aligned_cols=244 Identities=20% Similarity=0.273 Sum_probs=191.2
Q ss_pred ccccccCCeEEEEEEEcc--CCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEecc
Q 042823 29 RMLGRGQFGVSYLCTENS--TNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVVMELC 106 (477)
Q Consensus 29 ~~iG~G~~g~V~~~~~~~--~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~lv~e~~ 106 (477)
+.||+|+||.||+|.... ....+|+|.+.... .......+.+|+.+++.+ +||||+++++.+.....+|+||||+
T Consensus 1 ~~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~e~~~~~~l-~h~nii~~~~~~~~~~~~~lv~e~~ 77 (269)
T cd05042 1 DEIGNGWFGKVLLGEAHRGMSKARVVVKELRASA--TPDEQLLFLQEVQPYREL-NHPNVLQCLGQCIESIPYLLVLEFC 77 (269)
T ss_pred CcCCccCCceEEEEEEecCCCCeEEEEeecCccC--ChHHHHHHHHHHHHHHhC-CCCCcceEEEEECCCCceEEEEEeC
Confidence 369999999999996532 34568888765332 223345677899998888 7999999999999999999999999
Q ss_pred CCCchHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCCCc
Q 042823 107 EGGDLFDRIIAKG-----YNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQ 181 (477)
Q Consensus 107 ~gg~L~~~l~~~~-----~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~ 181 (477)
++|+|.+++.... ..++..+..++.||+.||.|||++||+||||||+||++ +.++.+||+|||++.......
T Consensus 78 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill---~~~~~~kl~dfg~~~~~~~~~ 154 (269)
T cd05042 78 PLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQADFIHSDLALRNCQL---TADLSVKIGDYGLALEQYPED 154 (269)
T ss_pred CCCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcCEecccccHhheEe---cCCCcEEEeccccccccccch
Confidence 9999999997643 24677888999999999999999999999999999999 778899999999886532221
Q ss_pred c---eecccccccccchhhhhh--------hcCCccchHhHHHHHHHHhh-CCCCCCCCChhhHHHHHHcC-CccCCCCC
Q 042823 182 V---YRDIVGSGFYIAPEVLRR--------RYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQG-EIDFDTDP 248 (477)
Q Consensus 182 ~---~~~~~gt~~y~aPE~~~~--------~~~~~~DiwslG~il~~l~t-g~~pf~~~~~~~~~~~i~~~-~~~~~~~~ 248 (477)
. .....+++.|+|||++.. .++.++|||||||++|+|++ |.+||...........+... ....+.+.
T Consensus 155 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (269)
T cd05042 155 YYITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQVLKQVVREQDIKLPKPQ 234 (269)
T ss_pred heeccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhhccCccCCCCc
Confidence 1 122345677999999742 46789999999999999999 78898777665555554333 22333222
Q ss_pred -CCCCCHHHHHHHHHhcccCccccCCHHHHhc
Q 042823 249 -WPSISSTAKDLVRRMLTKDPKRRITAAQVLE 279 (477)
Q Consensus 249 -~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~ 279 (477)
...+++.+.+++..|+ .||++|||++++++
T Consensus 235 ~~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~ 265 (269)
T cd05042 235 LDLKYSDRWYEVMQFCW-LDPETRPTAEEVHE 265 (269)
T ss_pred ccccCCHHHHHHHHHHh-cCcccccCHHHHHH
Confidence 2357888999999998 59999999999975
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina |
| >PHA02882 putative serine/threonine kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-39 Score=308.79 Aligned_cols=251 Identities=13% Similarity=0.121 Sum_probs=188.3
Q ss_pred ccccccccccccccccCCeEEEEEEEccC---CceEEEEEeecCCccchhhHH--------HHHHHHHHHHhccCCCCee
Q 042823 19 EDVMLHYFFGRMLGRGQFGVSYLCTENST---NRPYACKSIAKKPKMRLAEND--------MIRREIQIRLYLSGQPNVV 87 (477)
Q Consensus 19 ~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~---~~~~aiK~~~~~~~~~~~~~~--------~~~~e~~~~~~l~~hpniv 87 (477)
+....+|.+.+.||+|+||.||+|.+..+ +..+|+|+..........+.. ....+...+..+ +|+||+
T Consensus 8 ~i~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~-~h~~i~ 86 (294)
T PHA02882 8 DITGKEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNI-DHLGIP 86 (294)
T ss_pred ccCCCceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccC-CCCCCC
Confidence 34557899999999999999999998877 667777764322211101100 111222233344 799999
Q ss_pred EEEEEEEeCC----eEEEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCC
Q 042823 88 EFKSTYEDET----AVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDN 163 (477)
Q Consensus 88 ~~~~~~~~~~----~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~ 163 (477)
++++++.... ..++++|++.. ++.+.+......++..+..++.|++.||.|||+++|+||||||+|||+ +..
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiHrDiKp~Nill---~~~ 162 (294)
T PHA02882 87 KYYGCGSFKRCRMYYRFILLEKLVE-NTKEIFKRIKCKNKKLIKNIMKDMLTTLEYIHEHGISHGDIKPENIMV---DGN 162 (294)
T ss_pred cEEEeeeEecCCceEEEEEEehhcc-CHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE---cCC
Confidence 9998765443 45788998854 777777666667889999999999999999999999999999999999 677
Q ss_pred CCEEEeecCCccccCCCc--------ceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChh-hH
Q 042823 164 ALLKVTDFGSALLFEEGQ--------VYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKK-GT 233 (477)
Q Consensus 164 ~~~kl~Dfg~a~~~~~~~--------~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~-~~ 233 (477)
+.+||+|||+|..+.... ......||+.|+|||++.+ .++.++||||+||++|+|++|.+||.+.... ..
T Consensus 163 ~~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~ 242 (294)
T PHA02882 163 NRGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGNL 242 (294)
T ss_pred CcEEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccchHH
Confidence 889999999987653211 1123469999999999875 5899999999999999999999999876332 21
Q ss_pred --------HHHHHcCCccCCCCCCCCCCHHHHHHHHHhcccCccccCCHHHHhc
Q 042823 234 --------YDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLE 279 (477)
Q Consensus 234 --------~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~ 279 (477)
...+..+.. ..+..++.+.+++..|+..+|++||++.++++
T Consensus 243 ~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~ 291 (294)
T PHA02882 243 IHAAKCDFIKRLHEGKI-----KIKNANKFIYDFIECVTKLSYEEKPDYDALIK 291 (294)
T ss_pred HHHhHHHHHHHhhhhhh-----ccCCCCHHHHHHHHHHHhCCCCCCCCHHHHHH
Confidence 222222222 22456889999999999999999999999875
|
|
| >cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-39 Score=301.72 Aligned_cols=240 Identities=16% Similarity=0.183 Sum_probs=188.1
Q ss_pred ccccccCCeEEEEEEEcc------------CCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeC
Q 042823 29 RMLGRGQFGVSYLCTENS------------TNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDE 96 (477)
Q Consensus 29 ~~iG~G~~g~V~~~~~~~------------~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~ 96 (477)
+.||+|+||.||+|.... ....+|+|.+.... ......+.+|+.++..+ +||||+++++++..+
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~---~~~~~~~~~~~~~l~~l-~hp~iv~~~~~~~~~ 76 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSH---RDISLAFFETASMMRQV-SHKHIVLLYGVCVRD 76 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhh---hhHHHHHHHHHHHHHhC-CCCCEeeEEEEEecC
Confidence 468999999999997532 23357888764321 22344677788888888 799999999999999
Q ss_pred CeEEEEEeccCCCchHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecC----CCCCEEEeec
Q 042823 97 TAVHVVMELCEGGDLFDRIIA-KGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRD----DNALLKVTDF 171 (477)
Q Consensus 97 ~~~~lv~e~~~gg~L~~~l~~-~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~----~~~~~kl~Df 171 (477)
...++||||+++|+|..++.. ...+++..+..++.||+.||.|||++||+||||||+||++.... ....+|++||
T Consensus 77 ~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~ 156 (262)
T cd05077 77 VENIMVEEFVEFGPLDLFMHRKSDVLTTPWKFKVAKQLASALSYLEDKDLVHGNVCTKNILLAREGIDGECGPFIKLSDP 156 (262)
T ss_pred CCCEEEEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhCCeECCCCCcccEEEecCCccCCCCceeEeCCC
Confidence 999999999999999888775 35689999999999999999999999999999999999994322 1124899999
Q ss_pred CCccccCCCcceecccccccccchhhhh--hhcCCccchHhHHHHHHHHh-hCCCCCCCCChhhHHHHHHcCCccCCCCC
Q 042823 172 GSALLFEEGQVYRDIVGSGFYIAPEVLR--RRYGKEIDIWSAGVILYILL-SGVPPFWAETKKGTYDAILQGEIDFDTDP 248 (477)
Q Consensus 172 g~a~~~~~~~~~~~~~gt~~y~aPE~~~--~~~~~~~DiwslG~il~~l~-tg~~pf~~~~~~~~~~~i~~~~~~~~~~~ 248 (477)
|.+...... ....++..|+|||++. ..++.++|||||||++|+|+ +|..||......+. ..........
T Consensus 157 g~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~-~~~~~~~~~~---- 228 (262)
T cd05077 157 GIPITVLSR---QECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAEK-ERFYEGQCML---- 228 (262)
T ss_pred CCCccccCc---ccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhHH-HHHHhcCccC----
Confidence 988655322 2346788899999885 45889999999999999997 58888866543332 2222222221
Q ss_pred CCCCCHHHHHHHHHhcccCccccCCHHHHhcC
Q 042823 249 WPSISSTAKDLVRRMLTKDPKRRITAAQVLEH 280 (477)
Q Consensus 249 ~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h 280 (477)
....++++.+|+.+||+.||++||++.+++++
T Consensus 229 ~~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~ 260 (262)
T cd05077 229 VTPSCKELADLMTHCMNYDPNQRPFFRAIMRD 260 (262)
T ss_pred CCCChHHHHHHHHHHcCCChhhCcCHHHHHHh
Confidence 23356889999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom |
| >cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-39 Score=301.86 Aligned_cols=237 Identities=17% Similarity=0.173 Sum_probs=188.6
Q ss_pred ccccccCCeEEEEEEEccCC----------ceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCe
Q 042823 29 RMLGRGQFGVSYLCTENSTN----------RPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETA 98 (477)
Q Consensus 29 ~~iG~G~~g~V~~~~~~~~~----------~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~ 98 (477)
+.||+|+||.||+|.++.++ ..+++|.+..... ....+.+|+.+++.+ +||||+++++++.. ..
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~----~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~-~~ 74 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHR----DSLAFFETASLMSQL-SHKHLVKLYGVCVR-DE 74 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchh----hHHHHHHHHHHHHcC-CCcchhheeeEEec-CC
Confidence 46999999999999998776 3477776643321 156778899999988 79999999999988 77
Q ss_pred EEEEEeccCCCchHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecC----CCCCEEEeecCC
Q 042823 99 VHVVMELCEGGDLFDRIIAKG-YNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRD----DNALLKVTDFGS 173 (477)
Q Consensus 99 ~~lv~e~~~gg~L~~~l~~~~-~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~----~~~~~kl~Dfg~ 173 (477)
.++||||+++|+|.+++.... .++...+..++.||+.||.|||++||+||||||+||++.... ....+||+|||+
T Consensus 75 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~ 154 (259)
T cd05037 75 NIMVEEYVKFGPLDVFLHREKNNVSLHWKLDVAKQLASALHYLEDKKLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGI 154 (259)
T ss_pred cEEEEEcCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCCeecccCccceEEEecCccccCCceeEEeCCCCc
Confidence 899999999999999998766 789999999999999999999999999999999999994322 112799999999
Q ss_pred ccccCCCcceecccccccccchhhhhh---hcCCccchHhHHHHHHHHhh-CCCCCCCCChhhHHHHHHcCCccCCCCCC
Q 042823 174 ALLFEEGQVYRDIVGSGFYIAPEVLRR---RYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQGEIDFDTDPW 249 (477)
Q Consensus 174 a~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~DiwslG~il~~l~t-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~ 249 (477)
+..... .....++..|+|||++.+ .++.++|||||||++|+|++ |..||.............. ....+
T Consensus 155 a~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~~~~~~~~-~~~~~---- 226 (259)
T cd05037 155 PITVLS---REERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSEKERFYQD-QHRLP---- 226 (259)
T ss_pred cccccc---ccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCchhHHHHHhc-CCCCC----
Confidence 876543 123456778999999864 47889999999999999999 5888866543333222221 11111
Q ss_pred CCCCHHHHHHHHHhcccCccccCCHHHHhc
Q 042823 250 PSISSTAKDLVRRMLTKDPKRRITAAQVLE 279 (477)
Q Consensus 250 ~~~~~~~~~li~~~l~~dp~~R~s~~~~l~ 279 (477)
...+..+.+++.+||..+|++|||+.++++
T Consensus 227 ~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 256 (259)
T cd05037 227 MPDCAELANLINQCWTYDPTKRPSFRAILR 256 (259)
T ss_pred CCCchHHHHHHHHHhccChhhCCCHHHHHH
Confidence 122478999999999999999999999985
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki |
| >KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-40 Score=328.39 Aligned_cols=248 Identities=23% Similarity=0.402 Sum_probs=213.0
Q ss_pred cccccccccccccCCeEEEEEEEc-----cCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeC
Q 042823 22 MLHYFFGRMLGRGQFGVSYLCTEN-----STNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDE 96 (477)
Q Consensus 22 ~~~Y~~~~~iG~G~~g~V~~~~~~-----~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~ 96 (477)
...-++.+.||+|+||.||+|.-. ...+.||||.++... ......++++|+.++..+ +|||||++++++..+
T Consensus 485 r~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a--~~~~~~dF~REaeLla~l-~H~nIVrLlGVC~~~ 561 (774)
T KOG1026|consen 485 RSDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKA--ENQARQDFRREAELLAEL-QHPNIVRLLGVCREG 561 (774)
T ss_pred hhheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccc--cHHHHHHHHHHHHHHHhc-cCCCeEEEEEEEccC
Confidence 334566789999999999998753 234689999986543 334678899999999999 799999999999999
Q ss_pred CeEEEEEeccCCCchHHHHHHcC--------------CCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCC
Q 042823 97 TAVHVVMELCEGGDLFDRIIAKG--------------YNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDD 162 (477)
Q Consensus 97 ~~~~lv~e~~~gg~L~~~l~~~~--------------~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~ 162 (477)
+.+|+|+||+..|+|.++|...+ .++..+...|+.||+.|+.||-++.+|||||-..|+|| ++
T Consensus 562 ~P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~FVHRDLATRNCLV---ge 638 (774)
T KOG1026|consen 562 DPLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHHFVHRDLATRNCLV---GE 638 (774)
T ss_pred CeeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCcccccchhhhhcee---cc
Confidence 99999999999999999997532 27888999999999999999999999999999999999 88
Q ss_pred CCCEEEeecCCccccCCCccee---cccccccccchhhh-hhhcCCccchHhHHHHHHHHhh-CCCCCCCCChhhHHHHH
Q 042823 163 NALLKVTDFGSALLFEEGQVYR---DIVGSGFYIAPEVL-RRRYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAI 237 (477)
Q Consensus 163 ~~~~kl~Dfg~a~~~~~~~~~~---~~~gt~~y~aPE~~-~~~~~~~~DiwslG~il~~l~t-g~~pf~~~~~~~~~~~i 237 (477)
+..|||+|||+++..-....+. ...=...|||||.+ .++|+.++||||+||+|||+++ |..||++.+++++++.+
T Consensus 639 ~l~VKIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~EVIe~i 718 (774)
T KOG1026|consen 639 NLVVKISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQEVIECI 718 (774)
T ss_pred ceEEEecccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccchHHHHHHH
Confidence 9999999999998653332221 11224579999976 5789999999999999999998 99999999999999999
Q ss_pred HcCCccCCCCCCCCCCHHHHHHHHHhcccCccccCCHHHHh
Q 042823 238 LQGEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVL 278 (477)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l 278 (477)
.++.. ++.+ ..+|.++.+|+..||+.+|.+||++.+|-
T Consensus 719 ~~g~l-L~~P--e~CP~~vY~LM~~CW~~~P~~RPsF~eI~ 756 (774)
T KOG1026|consen 719 RAGQL-LSCP--ENCPTEVYSLMLECWNENPKRRPSFKEIH 756 (774)
T ss_pred HcCCc-ccCC--CCCCHHHHHHHHHHhhcCcccCCCHHHHH
Confidence 99987 4443 47999999999999999999999999984
|
|
| >cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-39 Score=304.45 Aligned_cols=239 Identities=16% Similarity=0.160 Sum_probs=188.2
Q ss_pred cccccCCeEEEEEEEccC------------------------CceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCC
Q 042823 30 MLGRGQFGVSYLCTENST------------------------NRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPN 85 (477)
Q Consensus 30 ~iG~G~~g~V~~~~~~~~------------------------~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpn 85 (477)
.||+|+||.||+|....+ ...||+|++.... ......+.+|+.++..+ +|||
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~---~~~~~~~~~~~~~~~~l-~h~n 77 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSH---RDIALAFFETASLMSQV-SHIH 77 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHH---HHHHHHHHHHHHHHhcC-CCCC
Confidence 699999999999975322 2357888775321 12334567788888888 7999
Q ss_pred eeEEEEEEEeCCeEEEEEeccCCCchHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeec----
Q 042823 86 VVEFKSTYEDETAVHVVMELCEGGDLFDRIIA-KGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISR---- 160 (477)
Q Consensus 86 iv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~-~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~---- 160 (477)
|+++++++......|+|||||++|+|..++.. .+.+++..+..++.||+.||.|||++||+||||||+||++...
T Consensus 78 iv~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~Nill~~~~~~~ 157 (274)
T cd05076 78 LAFVHGVCVRGSENIMVEEFVEHGPLDVCLRKEKGRVPVAWKITVAQQLASALSYLEDKNLVHGNVCAKNILLARLGLAE 157 (274)
T ss_pred eeeEEEEEEeCCceEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCccCCCCCcccEEEeccCccc
Confidence 99999999999999999999999999888865 4678999999999999999999999999999999999998432
Q ss_pred CCCCCEEEeecCCccccCCCcceecccccccccchhhhhh--hcCCccchHhHHHHHHHHh-hCCCCCCCCChhhHHHHH
Q 042823 161 DDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLRR--RYGKEIDIWSAGVILYILL-SGVPPFWAETKKGTYDAI 237 (477)
Q Consensus 161 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~l~-tg~~pf~~~~~~~~~~~i 237 (477)
.....+|++|||.+...... ....+++.|+|||.+.+ .++.++|||||||++|+|+ +|.+||.......... .
T Consensus 158 ~~~~~~kl~d~g~~~~~~~~---~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~-~ 233 (274)
T cd05076 158 GTSPFIKLSDPGVSFTALSR---EERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSEKER-F 233 (274)
T ss_pred CccceeeecCCccccccccc---cccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChHHHHH-H
Confidence 12345899999987543222 22357888999998864 4789999999999999984 7999998765544332 2
Q ss_pred HcCCccCCCCCCCCCCHHHHHHHHHhcccCccccCCHHHHhcC
Q 042823 238 LQGEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEH 280 (477)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h 280 (477)
.......+ ...++.+.++|.+||+.+|++|||+.+++++
T Consensus 234 ~~~~~~~~----~~~~~~~~~li~~cl~~~p~~Rps~~~il~~ 272 (274)
T cd05076 234 YEKKHRLP----EPSCKELATLISQCLTYEPTQRPSFRTILRD 272 (274)
T ss_pred HHhccCCC----CCCChHHHHHHHHHcccChhhCcCHHHHHHh
Confidence 22222222 2346789999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt |
| >cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-38 Score=303.11 Aligned_cols=248 Identities=23% Similarity=0.334 Sum_probs=195.6
Q ss_pred ccccccccccccCCeEEEEEEE----ccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEe--C
Q 042823 23 LHYFFGRMLGRGQFGVSYLCTE----NSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYED--E 96 (477)
Q Consensus 23 ~~Y~~~~~iG~G~~g~V~~~~~----~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~--~ 96 (477)
.+|++.+.||+|+||.||+|.. ..++..||+|.+.... ......+.+|++++..+ +||||+++++++.. .
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~---~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~ 79 (284)
T cd05081 4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHST---AEHLRDFEREIEILKSL-QHDNIVKYKGVCYSAGR 79 (284)
T ss_pred ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCC---HHHHHHHHHHHHHHHhC-CCCCeeEEEEEEccCCC
Confidence 4799999999999999999974 4578899999986432 23456788999999999 79999999998743 3
Q ss_pred CeEEEEEeccCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCcc
Q 042823 97 TAVHVVMELCEGGDLFDRIIAK-GYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSAL 175 (477)
Q Consensus 97 ~~~~lv~e~~~gg~L~~~l~~~-~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~ 175 (477)
..+++||||+++|+|.+++... ..+++..+..++.|++.||.|||++|++||||||+||++ +.++.+||+|||++.
T Consensus 80 ~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~aL~~LH~~~i~H~dlkp~nili---~~~~~~~l~dfg~~~ 156 (284)
T cd05081 80 RNLRLVMEYLPYGSLRDYLQKHRERLDHRKLLLYASQICKGMEYLGSKRYVHRDLATRNILV---ESENRVKIGDFGLTK 156 (284)
T ss_pred CceEEEEEecCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHhhEEE---CCCCeEEECCCcccc
Confidence 5689999999999999999764 468999999999999999999999999999999999999 677889999999988
Q ss_pred ccCCCcce----ecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChhh---------------HHH
Q 042823 176 LFEEGQVY----RDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKG---------------TYD 235 (477)
Q Consensus 176 ~~~~~~~~----~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~---------------~~~ 235 (477)
........ ....++..|+|||++.+ .++.++|||||||++|+|++|..|+......- ...
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (284)
T cd05081 157 VLPQDKEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAEFMRMMGNDKQGQMIVYHLI 236 (284)
T ss_pred cccCCCcceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchhhhhhcccccccccchHHHH
Confidence 65432211 11223456999999864 58899999999999999999877764322110 001
Q ss_pred HHHcCCccCCCCCCCCCCHHHHHHHHHhcccCccccCCHHHHhc
Q 042823 236 AILQGEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLE 279 (477)
Q Consensus 236 ~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~ 279 (477)
.+....... +..+.++..+.+|+.+||..+|++|||+.++++
T Consensus 237 ~~~~~~~~~--~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~ 278 (284)
T cd05081 237 ELLKNNGRL--PAPPGCPAEIYAIMKECWNNDPSQRPSFSELAL 278 (284)
T ss_pred HHHhcCCcC--CCCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence 111111111 122467899999999999999999999999975
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th |
| >KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-41 Score=294.21 Aligned_cols=256 Identities=22% Similarity=0.270 Sum_probs=212.7
Q ss_pred cccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEeccC
Q 042823 28 GRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVVMELCE 107 (477)
Q Consensus 28 ~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~lv~e~~~ 107 (477)
...||.|+||+|++..|+.+|+..|||.|+.... ..+..++..|.....+-.+.||||++|++.-.++..||.||+++
T Consensus 69 lg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~--~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCMELMd 146 (361)
T KOG1006|consen 69 LGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNI--EKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICMELMD 146 (361)
T ss_pred HHHhcCCcchhhhhhhcCccCcEEEEEEeeeccc--hHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHHHHh
Confidence 4679999999999999999999999999976543 35667888888888888799999999999999999999999996
Q ss_pred CCchHHHHH-----HcCCCCHHHHHHHHHHHHHHHHHHHH-cCCeeccCCCCceeeeecCCCCCEEEeecCCccccCCCc
Q 042823 108 GGDLFDRII-----AKGYNSERDAATVLRAIVNAVNVCHS-MGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQ 181 (477)
Q Consensus 108 gg~L~~~l~-----~~~~~~~~~~~~i~~qil~~L~~lH~-~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~ 181 (477)
- ||-.+.+ ++..++|..+..|..-.+.||.||.. .+|||||+||+|||+ +..|.|||||||++..+..+.
T Consensus 147 ~-SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~lkiIHRDvKPSNILl---dr~G~vKLCDFGIcGqLv~Si 222 (361)
T KOG1006|consen 147 I-SLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEELKIIHRDVKPSNILL---DRHGDVKLCDFGICGQLVDSI 222 (361)
T ss_pred h-hHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHhhhhhccCChhheEE---ecCCCEeeecccchHhHHHHH
Confidence 4 6633322 35678999999999999999999986 489999999999999 888999999999998776655
Q ss_pred ceecccccccccchhhhhh---hcCCccchHhHHHHHHHHhhCCCCCCCCCh-hhHHHHHHcCCccCCCCCC--CCCCHH
Q 042823 182 VYRDIVGSGFYIAPEVLRR---RYGKEIDIWSAGVILYILLSGVPPFWAETK-KGTYDAILQGEIDFDTDPW--PSISST 255 (477)
Q Consensus 182 ~~~~~~gt~~y~aPE~~~~---~~~~~~DiwslG~il~~l~tg~~pf~~~~~-~~~~~~i~~~~~~~~~~~~--~~~~~~ 255 (477)
....-.|...|||||.+.. .|+-++||||||++|||+.||..|+.+-.. -+++..+..+..+...... -.+|..
T Consensus 223 AkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~svfeql~~Vv~gdpp~l~~~~~~~~~s~~ 302 (361)
T KOG1006|consen 223 AKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDSVFEQLCQVVIGDPPILLFDKECVHYSFS 302 (361)
T ss_pred HhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHHHHHHHHHHHcCCCCeecCcccccccCHH
Confidence 4455678899999999853 489999999999999999999999976443 3444555566544322211 247899
Q ss_pred HHHHHHHhcccCccccCCHHHHhcCcccCcCCCC
Q 042823 256 AKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEA 289 (477)
Q Consensus 256 ~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~~~~ 289 (477)
+..||.-||.+|.+.||+..+++++||++.....
T Consensus 303 ~~~fintCl~Kd~~~Rpky~~Lk~~~fyr~y~~~ 336 (361)
T KOG1006|consen 303 MVRFINTCLIKDRSDRPKYDDLKKFPFYRMYAVE 336 (361)
T ss_pred HHHHHHHHhhcccccCcchhhhhcCchhhhhhhc
Confidence 9999999999999999999999999999876543
|
|
| >KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-40 Score=281.51 Aligned_cols=255 Identities=27% Similarity=0.485 Sum_probs=210.1
Q ss_pred ccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeC--Ce
Q 042823 21 VMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDE--TA 98 (477)
Q Consensus 21 ~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~--~~ 98 (477)
-.++|++++++|+|.|+.||.|.+..++.+++||+++.- ....+.+|+.|+..|.+||||++++++..+. ..
T Consensus 36 ~~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPV------kkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~Skt 109 (338)
T KOG0668|consen 36 NQDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPV------KKKKIKREIKILQNLRGGPNIIKLLDIVKDPESKT 109 (338)
T ss_pred ccchHHHHHHHcCccHhhHhcccccCCCceEEEeeechH------HHHHHHHHHHHHHhccCCCCeeehhhhhcCccccC
Confidence 457899999999999999999999999999999988532 2456899999999999999999999999764 45
Q ss_pred EEEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccC
Q 042823 99 VHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFE 178 (477)
Q Consensus 99 ~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~ 178 (477)
..+|+||+.+.+...+ -..++.-.++.++.+++.||.|||+.||.|||+||.|+++. .....++|+|+|+|....
T Consensus 110 paLiFE~v~n~Dfk~l---y~tl~d~dIryY~~elLkALdyCHS~GImHRDVKPhNvmId--h~~rkLrlIDWGLAEFYH 184 (338)
T KOG0668|consen 110 PSLIFEYVNNTDFKQL---YPTLTDYDIRYYIYELLKALDYCHSMGIMHRDVKPHNVMID--HELRKLRLIDWGLAEFYH 184 (338)
T ss_pred chhHhhhhccccHHHH---hhhhchhhHHHHHHHHHHHHhHHHhcCcccccCCcceeeec--hhhceeeeeecchHhhcC
Confidence 7899999988655433 24578889999999999999999999999999999999882 345679999999999998
Q ss_pred CCcceecccccccccchhhhh--hhcCCccchHhHHHHHHHHhhCCCCCCCC-ChhhHHHHHHcC-------------Cc
Q 042823 179 EGQVYRDIVGSGFYIAPEVLR--RRYGKEIDIWSAGVILYILLSGVPPFWAE-TKKGTYDAILQG-------------EI 242 (477)
Q Consensus 179 ~~~~~~~~~gt~~y~aPE~~~--~~~~~~~DiwslG~il~~l~tg~~pf~~~-~~~~~~~~i~~~-------------~~ 242 (477)
++...+-.+.+.+|--||.+- ..|+.+.|+|||||++..|...+.||... ++.+++-+|.+- ..
T Consensus 185 p~~eYnVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt~el~~Yl~KY~i 264 (338)
T KOG0668|consen 185 PGKEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGTDELYAYLNKYQI 264 (338)
T ss_pred CCceeeeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhChHHHHHHHHHHcc
Confidence 888888889999999999985 56899999999999999999999888543 343433333220 00
Q ss_pred c-----------CCCCCCC---------CCCHHHHHHHHHhcccCccccCCHHHHhcCcccCcC
Q 042823 243 D-----------FDTDPWP---------SISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRES 286 (477)
Q Consensus 243 ~-----------~~~~~~~---------~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~ 286 (477)
. ....+|. -+++++.+|+.++|..|-.+|+||.+++.||||...
T Consensus 265 ~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~HpyF~~~ 328 (338)
T KOG0668|consen 265 DLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMAHPYFAPV 328 (338)
T ss_pred CCChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhcCchHHHH
Confidence 1 1111221 257999999999999999999999999999999653
|
|
| >cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.5e-39 Score=307.01 Aligned_cols=248 Identities=20% Similarity=0.245 Sum_probs=199.6
Q ss_pred ccccccccccccCCeEEEEEEEccCCc----eEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCe
Q 042823 23 LHYFFGRMLGRGQFGVSYLCTENSTNR----PYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETA 98 (477)
Q Consensus 23 ~~Y~~~~~iG~G~~g~V~~~~~~~~~~----~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~ 98 (477)
++|++.+.||+|+||.||+|.+..++. .+|+|.+..... ......+.+|+.++..+ +||||+++++++... .
T Consensus 7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~e~~~~~~l-~h~niv~~~~~~~~~-~ 82 (303)
T cd05110 7 TELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTG--PKANVEFMDEALIMASM-DHPHLVRLLGVCLSP-T 82 (303)
T ss_pred hhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCC--HHHHHHHHHHHHHHHhC-CCCCcccEEEEEcCC-C
Confidence 468889999999999999999887776 468887754322 22344678899999998 799999999998754 4
Q ss_pred EEEEEeccCCCchHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCcccc
Q 042823 99 VHVVMELCEGGDLFDRIIAKG-YNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLF 177 (477)
Q Consensus 99 ~~lv~e~~~gg~L~~~l~~~~-~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~ 177 (477)
.++++||+++|+|.+++.... .+++..+..++.|++.||.|||++||+||||||+||++ +.++.+||+|||++...
T Consensus 83 ~~~v~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dikp~Nill---~~~~~~kL~Dfg~~~~~ 159 (303)
T cd05110 83 IQLVTQLMPHGCLLDYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERRLVHRDLAARNVLV---KSPNHVKITDFGLARLL 159 (303)
T ss_pred ceeeehhcCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHhhcCeeccccccceeee---cCCCceEEccccccccc
Confidence 679999999999999987754 58899999999999999999999999999999999998 66778999999999765
Q ss_pred CCCcc---eecccccccccchhhhhh-hcCCccchHhHHHHHHHHhh-CCCCCCCCChhhHHHHHHcCCccCCCCCCCCC
Q 042823 178 EEGQV---YRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQGEIDFDTDPWPSI 252 (477)
Q Consensus 178 ~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~t-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 252 (477)
..... .....++..|+|||++.+ .++.++|||||||++|+|++ |..||.+.........+..+. ..+ ..+.+
T Consensus 160 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~-~~~--~~~~~ 236 (303)
T cd05110 160 EGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLLEKGE-RLP--QPPIC 236 (303)
T ss_pred cCcccccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHCCC-CCC--CCCCC
Confidence 43221 122345678999999864 58899999999999999997 999997765554444443332 222 22457
Q ss_pred CHHHHHHHHHhcccCccccCCHHHHhcC
Q 042823 253 SSTAKDLVRRMLTKDPKRRITAAQVLEH 280 (477)
Q Consensus 253 ~~~~~~li~~~l~~dp~~R~s~~~~l~h 280 (477)
+..+.+++.+||..+|++||++.++++.
T Consensus 237 ~~~~~~li~~c~~~~p~~Rp~~~~l~~~ 264 (303)
T cd05110 237 TIDVYMVMVKCWMIDADSRPKFKELAAE 264 (303)
T ss_pred CHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 8899999999999999999999998763
|
Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin |
| >cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-39 Score=302.92 Aligned_cols=245 Identities=22% Similarity=0.328 Sum_probs=196.8
Q ss_pred ccccccCCeEEEEEEEccCC------ceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 042823 29 RMLGRGQFGVSYLCTENSTN------RPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVV 102 (477)
Q Consensus 29 ~~iG~G~~g~V~~~~~~~~~------~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~lv 102 (477)
+.||+|+||.||+|.++... +.+|+|.+.+... ......+.+|+.++..+ +||||+++++++......|+|
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~--~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~~v 77 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGAT--DQEKKEFLKEAHLMSNF-NHPNIVKLLGVCLLNEPQYII 77 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhcccc--hhhHHHHHHHHHHHHhc-CCCCeeeEeeeecCCCCeEEE
Confidence 46999999999999886544 6799998754321 23345678899999999 799999999999999999999
Q ss_pred EeccCCCchHHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecC--CCCCEEEeecCC
Q 042823 103 MELCEGGDLFDRIIAK-------GYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRD--DNALLKVTDFGS 173 (477)
Q Consensus 103 ~e~~~gg~L~~~l~~~-------~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~--~~~~~kl~Dfg~ 173 (477)
|||++|++|.+++... ..++..++..++.|++.||.|||+.+++|+||||+||++...+ ....++|+|||+
T Consensus 78 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~ 157 (269)
T cd05044 78 MELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMHFIHRDLAARNCLVSEKGYDADRVVKIGDFGL 157 (269)
T ss_pred EeccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCCcccCCCChheEEEecCCCCCCcceEECCccc
Confidence 9999999999999752 3467889999999999999999999999999999999994322 223799999999
Q ss_pred ccccCCCcc---eecccccccccchhhhh-hhcCCccchHhHHHHHHHHhh-CCCCCCCCChhhHHHHHHcCCccCCCCC
Q 042823 174 ALLFEEGQV---YRDIVGSGFYIAPEVLR-RRYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQGEIDFDTDP 248 (477)
Q Consensus 174 a~~~~~~~~---~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~l~t-g~~pf~~~~~~~~~~~i~~~~~~~~~~~ 248 (477)
+........ .....++..|+|||.+. +.++.++|||||||++|+|++ |..||...........+..+... ..
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~---~~ 234 (269)
T cd05044 158 ARDIYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQEVLQHVTAGGRL---QK 234 (269)
T ss_pred ccccccccccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCHHHHHHHHhcCCcc---CC
Confidence 875432211 11234567899999986 468999999999999999998 99999877666655555443211 22
Q ss_pred CCCCCHHHHHHHHHhcccCccccCCHHHHhc
Q 042823 249 WPSISSTAKDLVRRMLTKDPKRRITAAQVLE 279 (477)
Q Consensus 249 ~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~ 279 (477)
.+.+|+.+.+++.+||..+|.+||++.++++
T Consensus 235 ~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 265 (269)
T cd05044 235 PENCPDKIYQLMTNCWAQDPSERPTFDRIQE 265 (269)
T ss_pred cccchHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence 2467899999999999999999999999875
|
Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male |
| >cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-38 Score=298.50 Aligned_cols=242 Identities=24% Similarity=0.308 Sum_probs=192.1
Q ss_pred ccccccCCeEEEEEEEcc---CCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEE-eCCeEEEEEe
Q 042823 29 RMLGRGQFGVSYLCTENS---TNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYE-DETAVHVVME 104 (477)
Q Consensus 29 ~~iG~G~~g~V~~~~~~~---~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~-~~~~~~lv~e 104 (477)
+.||+|+||.||+|.+.. .+..+|+|.+.... .......+.+|+.+++.+ +||||+++++++. .++..++|||
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~~lv~e 77 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRIT--DLEEVEQFLKEGIIMKDF-SHPNVLSLLGICLPSEGSPLVVLP 77 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCccC--CHHHHHHHHHHHHHHccC-CCCCcceEEEEeecCCCCcEEEEe
Confidence 468999999999998653 34579999875322 223456777899988888 7999999999765 5667899999
Q ss_pred ccCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCCCc--
Q 042823 105 LCEGGDLFDRIIAK-GYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQ-- 181 (477)
Q Consensus 105 ~~~gg~L~~~l~~~-~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~-- 181 (477)
|+.+|+|.+++... ...+...+..++.|++.||.|||+.+++||||||+||++ +..+.+||+|||++.......
T Consensus 78 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlk~~nili---~~~~~~kl~dfg~~~~~~~~~~~ 154 (262)
T cd05058 78 YMKHGDLRNFIRSETHNPTVKDLIGFGLQVAKGMEYLASKKFVHRDLAARNCML---DESFTVKVADFGLARDIYDKEYY 154 (262)
T ss_pred cCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEE---cCCCcEEECCccccccccCCcce
Confidence 99999999998764 346777888999999999999999999999999999999 677889999999987543211
Q ss_pred ---ceecccccccccchhhhh-hhcCCccchHhHHHHHHHHhh-CCCCCCCCChhhHHHHHHcCCccCCCCCCCCCCHHH
Q 042823 182 ---VYRDIVGSGFYIAPEVLR-RRYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTA 256 (477)
Q Consensus 182 ---~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~l~t-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 256 (477)
......+++.|+|||.+. ..++.++|||||||++|+|++ |.+||...........+..+..... ...+++.+
T Consensus 155 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ 231 (262)
T cd05058 155 SVHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDSFDITVYLLQGRRLLQ---PEYCPDPL 231 (262)
T ss_pred eecccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcCCCCCC---CCcCCHHH
Confidence 112334577899999885 468899999999999999999 5677776666555555554432211 12468899
Q ss_pred HHHHHHhcccCccccCCHHHHhc
Q 042823 257 KDLVRRMLTKDPKRRITAAQVLE 279 (477)
Q Consensus 257 ~~li~~~l~~dp~~R~s~~~~l~ 279 (477)
.+++.+||..+|++||++.++++
T Consensus 232 ~~li~~cl~~~p~~Rp~~~~il~ 254 (262)
T cd05058 232 YEVMLSCWHPKPEMRPTFSELVS 254 (262)
T ss_pred HHHHHHHcCCChhhCCCHHHHHH
Confidence 99999999999999999999975
|
Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca |
| >cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-38 Score=298.00 Aligned_cols=244 Identities=18% Similarity=0.252 Sum_probs=189.9
Q ss_pred ccccccCCeEEEEEEEccC--CceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEecc
Q 042823 29 RMLGRGQFGVSYLCTENST--NRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVVMELC 106 (477)
Q Consensus 29 ~~iG~G~~g~V~~~~~~~~--~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~lv~e~~ 106 (477)
+.||+|+||.||+|..... ...+++|.+.... .......+.+|+.++..+ +||||+++++.+......|+||||+
T Consensus 1 ~~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~e~~~~~~l-~h~~iv~~~~~~~~~~~~~lv~e~~ 77 (268)
T cd05086 1 QEIGNGWFGKVLLSEIYTDTGVARVVVKELKANA--SSKEQNEFLQQGDPYRIL-QHPNILQCLGQCVEAIPYLLVFEYC 77 (268)
T ss_pred CcCCCCcCceEEEEEEEcCCCcceEEEEEecCCC--ChHHHHHHHHHHHHHhcc-CCcchhheEEEecCCCccEEEEecC
Confidence 3699999999999975432 2345666654332 123456788899888888 7999999999999999999999999
Q ss_pred CCCchHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCCCc-
Q 042823 107 EGGDLFDRIIAK----GYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQ- 181 (477)
Q Consensus 107 ~gg~L~~~l~~~----~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~- 181 (477)
++|+|.+++.+. ...++..+..++.||+.||.|||+++++||||||+||++ +.++.+||+|||++.......
T Consensus 78 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nil~---~~~~~~~l~Dfg~~~~~~~~~~ 154 (268)
T cd05086 78 ELGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHNFLHSDLALRNCFL---TSDLTVKVGDYGIGPSRYKEDY 154 (268)
T ss_pred CCCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCeeccCCccceEEE---cCCccEEecccccccccCcchh
Confidence 999999999764 235667788999999999999999999999999999999 677889999999875422111
Q ss_pred --ceecccccccccchhhhhh--------hcCCccchHhHHHHHHHHhh-CCCCCCCCChhhHHHHHHcCC-ccCCCC-C
Q 042823 182 --VYRDIVGSGFYIAPEVLRR--------RYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQGE-IDFDTD-P 248 (477)
Q Consensus 182 --~~~~~~gt~~y~aPE~~~~--------~~~~~~DiwslG~il~~l~t-g~~pf~~~~~~~~~~~i~~~~-~~~~~~-~ 248 (477)
......|++.|+|||++.. .++.++|||||||++|+|++ |.+||......+.+..+..+. .....+ .
T Consensus 155 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (268)
T cd05086 155 IETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDREVLNHVIKDQQVKLFKPQL 234 (268)
T ss_pred hhcccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhhcccccCCCcc
Confidence 1123567889999998742 35778999999999999997 577887766666666554432 222222 2
Q ss_pred CCCCCHHHHHHHHHhcccCccccCCHHHHhc
Q 042823 249 WPSISSTAKDLVRRMLTKDPKRRITAAQVLE 279 (477)
Q Consensus 249 ~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~ 279 (477)
...+++.+.+++..|| .+|++||++.++++
T Consensus 235 ~~~~~~~~~~l~~~c~-~~P~~Rp~~~~i~~ 264 (268)
T cd05086 235 ELPYSERWYEVLQFCW-LSPEKRATAEEVHR 264 (268)
T ss_pred CCCCcHHHHHHHHHHh-hCcccCCCHHHHHH
Confidence 2357889999999999 67999999999975
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage |
| >cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-38 Score=299.51 Aligned_cols=248 Identities=20% Similarity=0.293 Sum_probs=199.3
Q ss_pred ccccccccccCCeEEEEEEEc---cCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCC----
Q 042823 25 YFFGRMLGRGQFGVSYLCTEN---STNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDET---- 97 (477)
Q Consensus 25 Y~~~~~iG~G~~g~V~~~~~~---~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~---- 97 (477)
|.+.+.||+|+||.||+|.++ .+++.||+|++..... .....+.+.+|++++..+ +||||+++++++....
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~~ 78 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIF-SSSDIEEFLREAACMKEF-DHPNVIKLIGVSLRSRAKGR 78 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccC-ChHHHHHHHHHHHHHhcC-CCCCcceEEEEEccCCCCCc
Confidence 678899999999999999864 3578999999865432 233456688899999999 7999999999886432
Q ss_pred --eEEEEEeccCCCchHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEe
Q 042823 98 --AVHVVMELCEGGDLFDRIIAK------GYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVT 169 (477)
Q Consensus 98 --~~~lv~e~~~gg~L~~~l~~~------~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~ 169 (477)
..+++++|+.+|+|.+++... ..++...+..++.|++.||.|||++||+||||||+||++ +.++.+||+
T Consensus 79 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~nili---~~~~~~kl~ 155 (273)
T cd05074 79 LPIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKNFIHRDLAARNCML---NENMTVCVA 155 (273)
T ss_pred ccceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccchhhEEE---cCCCCEEEC
Confidence 347899999999998887532 246888999999999999999999999999999999999 677889999
Q ss_pred ecCCccccCCCcc---eecccccccccchhhhhh-hcCCccchHhHHHHHHHHhh-CCCCCCCCChhhHHHHHHcCCccC
Q 042823 170 DFGSALLFEEGQV---YRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQGEIDF 244 (477)
Q Consensus 170 Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~t-g~~pf~~~~~~~~~~~i~~~~~~~ 244 (477)
|||.+........ .....+++.|++||.+.+ .++.++|||||||++|+|++ |.+||.+.........+.......
T Consensus 156 dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~ 235 (273)
T cd05074 156 DFGLSKKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENSEIYNYLIKGNRLK 235 (273)
T ss_pred cccccccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCHHHHHHHHHcCCcCC
Confidence 9999876533221 122345678999999864 57889999999999999999 899998777666665555443211
Q ss_pred CCCCCCCCCHHHHHHHHHhcccCccccCCHHHHhcC
Q 042823 245 DTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEH 280 (477)
Q Consensus 245 ~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h 280 (477)
..+..++.+.+++.+||+.+|+.|||+.+++++
T Consensus 236 ---~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~ 268 (273)
T cd05074 236 ---QPPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQ 268 (273)
T ss_pred ---CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 124578999999999999999999999999753
|
Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac |
| >PLN03225 Serine/threonine-protein kinase SNT7; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-38 Score=325.78 Aligned_cols=256 Identities=22% Similarity=0.339 Sum_probs=176.6
Q ss_pred ccccccccccccccCCeEEEEEEEccC----CceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEE----
Q 042823 21 VMLHYFFGRMLGRGQFGVSYLCTENST----NRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKST---- 92 (477)
Q Consensus 21 ~~~~Y~~~~~iG~G~~g~V~~~~~~~~----~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~---- 92 (477)
-.++|.+.+.||+|+||.||+|++..+ +..||+|++..... .....++ .+ ... .+.+++.+...
T Consensus 130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~-----~e~~~~e-~l-~~~-~~~~~~~~~~~~~~~ 201 (566)
T PLN03225 130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGA-----VEIWMNE-RV-RRA-CPNSCADFVYGFLEP 201 (566)
T ss_pred ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccch-----hHHHHHH-HH-Hhh-chhhHHHHHHhhhcc
Confidence 456899999999999999999999988 89999998753221 1111111 11 111 12222222221
Q ss_pred --EEeCCeEEEEEeccCCCchHHHHHHcCC--------------------CCHHHHHHHHHHHHHHHHHHHHcCCeeccC
Q 042823 93 --YEDETAVHVVMELCEGGDLFDRIIAKGY--------------------NSERDAATVLRAIVNAVNVCHSMGVMHRDL 150 (477)
Q Consensus 93 --~~~~~~~~lv~e~~~gg~L~~~l~~~~~--------------------~~~~~~~~i~~qil~~L~~lH~~~ivH~dl 150 (477)
......+++|+||+.+++|.+++..... ..+..+..++.||+.||.|||++||+||||
T Consensus 202 ~~~~~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~gIiHRDL 281 (566)
T PLN03225 202 VSSKKEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTGIVHRDV 281 (566)
T ss_pred cccccCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCCEEeCcC
Confidence 2456679999999999999998875421 123456689999999999999999999999
Q ss_pred CCCceeeeecCCCCCEEEeecCCccccCCC--cceecccccccccchhhhhh-----------------------hcCCc
Q 042823 151 KPENFSFISRDDNALLKVTDFGSALLFEEG--QVYRDIVGSGFYIAPEVLRR-----------------------RYGKE 205 (477)
Q Consensus 151 kp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~~~gt~~y~aPE~~~~-----------------------~~~~~ 205 (477)
||+|||+. ...+.+||+|||+|...... .......+|+.|+|||.+.. .++.+
T Consensus 282 KP~NILl~--~~~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k 359 (566)
T PLN03225 282 KPQNIIFS--EGSGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDR 359 (566)
T ss_pred CHHHEEEe--CCCCcEEEEeCCCccccccccccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCC
Confidence 99999982 23578999999999765332 22345688999999997531 23456
Q ss_pred cchHhHHHHHHHHhhCCCCCCCCChhhHHHHH-HcCCccC-------CCC----------CCCCCCHHHHHHHHHhcccC
Q 042823 206 IDIWSAGVILYILLSGVPPFWAETKKGTYDAI-LQGEIDF-------DTD----------PWPSISSTAKDLVRRMLTKD 267 (477)
Q Consensus 206 ~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i-~~~~~~~-------~~~----------~~~~~~~~~~~li~~~l~~d 267 (477)
+||||+||++|+|+++..|+.. ....+..+ ....... ... .+...+....+||.+||++|
T Consensus 360 ~DVwSlGviL~el~~~~~~~~~--~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~~mL~~d 437 (566)
T PLN03225 360 FDIYSAGLIFLQMAFPNLRSDS--NLIQFNRQLKRNDYDLVAWRKLVEPRASPDLRRGFEVLDLDGGAGWELLKSMMRFK 437 (566)
T ss_pred cccHHHHHHHHHHHhCcCCCch--HHHHHHHHHHhcCCcHHHHHHhhccccchhhhhhhhhccccchHHHHHHHHHccCC
Confidence 7999999999999997766432 11111111 1111000 000 00112334568999999999
Q ss_pred ccccCCHHHHhcCcccCcCCC
Q 042823 268 PKRRITAAQVLEHPWLRESGE 288 (477)
Q Consensus 268 p~~R~s~~~~l~h~~~~~~~~ 288 (477)
|++|||+.++|+||||.....
T Consensus 438 P~kR~ta~e~L~Hpff~~~~~ 458 (566)
T PLN03225 438 GRQRISAKAALAHPYFDREGL 458 (566)
T ss_pred cccCCCHHHHhCCcCcCCCCc
Confidence 999999999999999987543
|
|
| >cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-38 Score=301.65 Aligned_cols=249 Identities=26% Similarity=0.383 Sum_probs=200.1
Q ss_pred ccccccccccccCCeEEEEEEEc----cCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEe--C
Q 042823 23 LHYFFGRMLGRGQFGVSYLCTEN----STNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYED--E 96 (477)
Q Consensus 23 ~~Y~~~~~iG~G~~g~V~~~~~~----~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~--~ 96 (477)
.+|++.+.||+|+||.||+|.+. .++..+|+|++...... .....+.+|+.++..+ .||||+++++++.. .
T Consensus 4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~--~~~~~~~~ei~~l~~l-~~~~i~~~~~~~~~~~~ 80 (284)
T cd05038 4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEE--QHRSDFEREIEILRTL-DHENIVKYKGVCEKPGG 80 (284)
T ss_pred hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccch--HHHHHHHHHHHHHHhC-CCCChheEEeeeecCCC
Confidence 46888999999999999999864 34789999998654322 3456788999999999 79999999999877 5
Q ss_pred CeEEEEEeccCCCchHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCcc
Q 042823 97 TAVHVVMELCEGGDLFDRIIAKG-YNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSAL 175 (477)
Q Consensus 97 ~~~~lv~e~~~gg~L~~~l~~~~-~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~ 175 (477)
...++||||+++++|.+++.... .++...+..++.|++.||.|||++|++||||||+||++ +.++.++|+|||.+.
T Consensus 81 ~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~nil~---~~~~~~~l~dfg~~~ 157 (284)
T cd05038 81 RSLRLIMEYLPSGSLRDYLQRHRDQINLKRLLLFSSQICKGMDYLGSQRYIHRDLAARNILV---ESEDLVKISDFGLAK 157 (284)
T ss_pred CceEEEEecCCCCCHHHHHHhCccccCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEE---cCCCCEEEccccccc
Confidence 68999999999999999997754 68999999999999999999999999999999999999 677899999999998
Q ss_pred ccCCCcce----ecccccccccchhhhh-hhcCCccchHhHHHHHHHHhhCCCCCCCCChhh--------------HHHH
Q 042823 176 LFEEGQVY----RDIVGSGFYIAPEVLR-RRYGKEIDIWSAGVILYILLSGVPPFWAETKKG--------------TYDA 236 (477)
Q Consensus 176 ~~~~~~~~----~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~--------------~~~~ 236 (477)
........ ....++..|+|||.+. ..++.++||||||+++|+|+||..|+....... ....
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (284)
T cd05038 158 VLPEDKDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLLE 237 (284)
T ss_pred ccccCCcceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhccccccccccccHHHHHH
Confidence 76532211 1223456799999886 468889999999999999999999986543221 1112
Q ss_pred HHcCCccCCCCCCCCCCHHHHHHHHHhcccCccccCCHHHHhc
Q 042823 237 ILQGEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLE 279 (477)
Q Consensus 237 i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~ 279 (477)
........+. ...++.++.+++.+||+.+|++|||+.++++
T Consensus 238 ~~~~~~~~~~--~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~ 278 (284)
T cd05038 238 LLKEGERLPR--PPSCPDEVYDLMKLCWEAEPQDRPSFADLIL 278 (284)
T ss_pred HHHcCCcCCC--CccCCHHHHHHHHHHhccChhhCCCHHHHHH
Confidence 2222222221 2356789999999999999999999999975
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut |
| >KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-38 Score=329.75 Aligned_cols=249 Identities=24% Similarity=0.366 Sum_probs=211.4
Q ss_pred cccccccccccccCCeEEEEEEEccCCc-----eEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeC
Q 042823 22 MLHYFFGRMLGRGQFGVSYLCTENSTNR-----PYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDE 96 (477)
Q Consensus 22 ~~~Y~~~~~iG~G~~g~V~~~~~~~~~~-----~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~ 96 (477)
...-.+.+.||+|+||.||.|....... .||+|.+.+.. +.++...+.+|..++..+ +|||||++++++-+.
T Consensus 691 ~~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~--~~~~~~~Fl~Ea~~m~~f-~HpNiv~liGv~l~~ 767 (1025)
T KOG1095|consen 691 RKNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLS--SEQEVSDFLKEALLMSKF-DHPNIVSLIGVCLDS 767 (1025)
T ss_pred hhheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccC--CHHHHHHHHHHHHHHhcC-CCcceeeEEEeecCC
Confidence 3445678899999999999998764433 38888886543 456778899999999999 799999999999999
Q ss_pred CeEEEEEeccCCCchHHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEe
Q 042823 97 TAVHVVMELCEGGDLFDRIIAK-------GYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVT 169 (477)
Q Consensus 97 ~~~~lv~e~~~gg~L~~~l~~~-------~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~ 169 (477)
...+|++||+.||+|..+|.+. ..++......++.+|+.|++||+++++|||||...|+|+ +....|||+
T Consensus 768 ~~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~fvHRDLAaRNCLL---~~~r~VKIa 844 (1025)
T KOG1095|consen 768 GPPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKHFVHRDLAARNCLL---DERRVVKIA 844 (1025)
T ss_pred CCcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCCCcCcchhhhheee---cccCcEEEc
Confidence 9999999999999999999875 357888999999999999999999999999999999999 777999999
Q ss_pred ecCCccccCCCcceecc---cccccccchhhhh-hhcCCccchHhHHHHHHHHhh-CCCCCCCCChhhHHHHHHcCCccC
Q 042823 170 DFGSALLFEEGQVYRDI---VGSGFYIAPEVLR-RRYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQGEIDF 244 (477)
Q Consensus 170 Dfg~a~~~~~~~~~~~~---~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~l~t-g~~pf~~~~~~~~~~~i~~~~~~~ 244 (477)
|||+|+..-....++.. .-...|||||.+. +.++.++|||||||++||++| |..||.+.++.++..-++.+. ..
T Consensus 845 DFGlArDiy~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~v~~~~~~gg-RL 923 (1025)
T KOG1095|consen 845 DFGLARDIYDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFEVLLDVLEGG-RL 923 (1025)
T ss_pred ccchhHhhhhchheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchHHHHHHHHhCC-cc
Confidence 99999955433332211 1134699999997 679999999999999999999 999999999888888666655 33
Q ss_pred CCCCCCCCCHHHHHHHHHhcccCccccCCHHHHhc
Q 042823 245 DTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLE 279 (477)
Q Consensus 245 ~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~ 279 (477)
+. .+.+++.+.+++..||+.+|++||++..+++
T Consensus 924 ~~--P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~ 956 (1025)
T KOG1095|consen 924 DP--PSYCPEKLYQLMLQCWKHDPEDRPSFRTIVE 956 (1025)
T ss_pred CC--CCCCChHHHHHHHHHccCChhhCccHHHHHh
Confidence 32 2578999999999999999999999999987
|
|
| >KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-39 Score=289.67 Aligned_cols=259 Identities=26% Similarity=0.430 Sum_probs=213.6
Q ss_pred ccccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeC
Q 042823 17 AYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDE 96 (477)
Q Consensus 17 ~~~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~ 96 (477)
....+..||.-.+++|.|.- .|..|.+..+++.||+|..... ........+..+|...+..+ .|+||++++.+|...
T Consensus 11 s~ftv~~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~p-f~n~~~akra~rel~l~~~v-~~~nii~l~n~ftP~ 87 (369)
T KOG0665|consen 11 STFTVPKRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRP-FQNQTHAKRAYRELKLMKCV-NHKNIISLLNVFTPQ 87 (369)
T ss_pred cceeeeeeeeeecccCCCCc-eEEecchhhccCceehhhhcCc-cccCccchhhhhhhhhhhhh-cccceeeeeeccCcc
Confidence 34556779999999999999 8888999999999999988654 33445567788999998888 799999999999543
Q ss_pred ------CeEEEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEee
Q 042823 97 ------TAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTD 170 (477)
Q Consensus 97 ------~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~D 170 (477)
..+|+||||+.+ +|.+.+. ..+.-..+..|++|++.|+.|||+.||+||||||+||++ ...+.+||.|
T Consensus 88 ~~l~~~~e~y~v~e~m~~-nl~~vi~--~elDH~tis~i~yq~~~~ik~lhs~~IihRdLkPsnivv---~~~~~lKi~d 161 (369)
T KOG0665|consen 88 KTLEEFQEVYLVMELMDA-NLCQVIL--MELDHETISYILYQMLCGIKHLHSAGIIHRDLKPSNIVV---NSDCTLKILD 161 (369)
T ss_pred ccHHHHHhHHHHHHhhhh-HHHHHHH--HhcchHHHHHHHHHHHHHHHHHHhcceeecccCccccee---cchhheeecc
Confidence 458999999965 8988776 346778899999999999999999999999999999999 8889999999
Q ss_pred cCCccccCCCcceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCc-------
Q 042823 171 FGSALLFEEGQVYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEI------- 242 (477)
Q Consensus 171 fg~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~------- 242 (477)
||+|......-.....+.|.+|.|||++.+ .|...+||||+|||+.||++|+..|.+....+.+.++.....
T Consensus 162 fg~ar~e~~~~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd~~F~ 241 (369)
T KOG0665|consen 162 FGLARTEDTDFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTPDPSFM 241 (369)
T ss_pred chhhcccCcccccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHHhcCCCHHHH
Confidence 999987665545567789999999999865 599999999999999999999999988765555544432100
Q ss_pred ------------------------cCCCCCCC-------CCCHHHHHHHHHhcccCccccCCHHHHhcCcccC
Q 042823 243 ------------------------DFDTDPWP-------SISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLR 284 (477)
Q Consensus 243 ------------------------~~~~~~~~-------~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~ 284 (477)
.++...|+ .-+..+++++.+||..||++|.|++++|+|||++
T Consensus 242 ~qL~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~HPY~~ 314 (369)
T KOG0665|consen 242 KQLQPTVRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALRHPYIK 314 (369)
T ss_pred HHhhHHHHHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhcCCeee
Confidence 11111222 2345789999999999999999999999999996
|
|
| >KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-38 Score=304.92 Aligned_cols=253 Identities=23% Similarity=0.300 Sum_probs=198.1
Q ss_pred ccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCC-
Q 042823 19 EDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDET- 97 (477)
Q Consensus 19 ~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~- 97 (477)
....+.|.-...||+|+||.||+|.-.. +..||||++....... ..++.+|+.++.++ +|||+|+++++|.+.+
T Consensus 71 ~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~-~~~vAVK~~~~~~~~~---~~eF~~Ei~~ls~l-~H~Nlv~LlGyC~e~~~ 145 (361)
T KOG1187|consen 71 RKATNNFSESNLIGEGGFGTVYKGVLSD-GTVVAVKRLSSNSGQG---EREFLNEVEILSRL-RHPNLVKLLGYCLEGGE 145 (361)
T ss_pred HHHHhCCchhcceecCCCeEEEEEEECC-CCEEEEEEecCCCCcc---hhHHHHHHHHHhcC-CCcCcccEEEEEecCCc
Confidence 3445567777899999999999998754 4899999775433211 34599999999999 5999999999999888
Q ss_pred eEEEEEeccCCCchHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHcC---CeeccCCCCceeeeecCCCCCEEEeecC
Q 042823 98 AVHVVMELCEGGDLFDRIIAKG--YNSERDAATVLRAIVNAVNVCHSMG---VMHRDLKPENFSFISRDDNALLKVTDFG 172 (477)
Q Consensus 98 ~~~lv~e~~~gg~L~~~l~~~~--~~~~~~~~~i~~qil~~L~~lH~~~---ivH~dlkp~Nil~~~~~~~~~~kl~Dfg 172 (477)
..+||+||+++|+|.+.|.... .++.....+|+..++.||.|||... ||||||||+|||+ +++...||+|||
T Consensus 146 ~~~LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILL---D~~~~aKlsDFG 222 (361)
T KOG1187|consen 146 HRLLVYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILL---DEDFNAKLSDFG 222 (361)
T ss_pred eEEEEEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeE---CCCCCEEccCcc
Confidence 5999999999999999998765 7899999999999999999999854 9999999999999 889999999999
Q ss_pred CccccCC-Ccceecc-cccccccchhhhh-hhcCCccchHhHHHHHHHHhhCCCCCCCCC---hhhHHH----HHHcCCc
Q 042823 173 SALLFEE-GQVYRDI-VGSGFYIAPEVLR-RRYGKEIDIWSAGVILYILLSGVPPFWAET---KKGTYD----AILQGEI 242 (477)
Q Consensus 173 ~a~~~~~-~~~~~~~-~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~l~tg~~pf~~~~---~~~~~~----~i~~~~~ 242 (477)
+|..... ....... .||..|+|||... +..+.++|||||||++.||+||+.|..... ...... .+..+..
T Consensus 223 La~~~~~~~~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~~~~~~~~ 302 (361)
T KOG1187|consen 223 LAKLGPEGDTSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKPLLEEGKL 302 (361)
T ss_pred CcccCCccccceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHHHHHHCcch
Confidence 9976544 3333333 8999999999986 679999999999999999999998876432 111111 2222211
Q ss_pred c-C-CCCCC-CCCC-----HHHHHHHHHhcccCccccCCHHHHhc
Q 042823 243 D-F-DTDPW-PSIS-----STAKDLVRRMLTKDPKRRITAAQVLE 279 (477)
Q Consensus 243 ~-~-~~~~~-~~~~-----~~~~~li~~~l~~dp~~R~s~~~~l~ 279 (477)
. + ++... ...+ ..+..+..+|++.+|..||++.++++
T Consensus 303 ~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~ 347 (361)
T KOG1187|consen 303 REIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVK 347 (361)
T ss_pred hheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHH
Confidence 1 1 11111 1222 23556778999999999999999754
|
|
| >KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-38 Score=304.22 Aligned_cols=252 Identities=23% Similarity=0.344 Sum_probs=211.3
Q ss_pred ccccccccccccccccccCCeEEEEEEEccC----CceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEE
Q 042823 17 AYEDVMLHYFFGRMLGRGQFGVSYLCTENST----NRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKST 92 (477)
Q Consensus 17 ~~~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~----~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~ 92 (477)
.++.-++.-.+.+.||.|.||.||.|+...- .-.||||..+.... ....+.+..|..+++.+ +|||||+++++
T Consensus 383 nyel~Re~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t--~d~tekflqEa~iMrnf-dHphIikLIGv 459 (974)
T KOG4257|consen 383 NYELRRELITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCT--PDDTEKFLQEASIMRNF-DHPHIIKLIGV 459 (974)
T ss_pred cceeehhhccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCC--hhhHHHHHHHHHHHHhC-CCcchhheeee
Confidence 3444455556678999999999999986432 34588998866433 33467788999999999 89999999999
Q ss_pred EEeCCeEEEEEeccCCCchHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeec
Q 042823 93 YEDETAVHVVMELCEGGDLFDRIIAKG-YNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDF 171 (477)
Q Consensus 93 ~~~~~~~~lv~e~~~gg~L~~~l~~~~-~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Df 171 (477)
+.+. ..+||||+++-|.|..||..++ .++......+++||+.||.|||+.++|||||-..|||+ .+..+|||+||
T Consensus 460 ~~e~-P~WivmEL~~~GELr~yLq~nk~sL~l~tL~ly~~Qi~talaYLeSkrfVHRDIAaRNiLV---sSp~CVKLaDF 535 (974)
T KOG4257|consen 460 CVEQ-PMWIVMELAPLGELREYLQQNKDSLPLRTLTLYCYQICTALAYLESKRFVHRDIAARNILV---SSPQCVKLADF 535 (974)
T ss_pred eecc-ceeEEEecccchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHHhhchhhhhhhhhheee---cCcceeeeccc
Confidence 9754 6899999999999999998865 68888999999999999999999999999999999999 66778999999
Q ss_pred CCccccCCCcceeccccc--ccccchhhhh-hhcCCccchHhHHHHHHHHhh-CCCCCCCCChhhHHHHHHcCCccCCCC
Q 042823 172 GSALLFEEGQVYRDIVGS--GFYIAPEVLR-RRYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQGEIDFDTD 247 (477)
Q Consensus 172 g~a~~~~~~~~~~~~~gt--~~y~aPE~~~-~~~~~~~DiwslG~il~~l~t-g~~pf~~~~~~~~~~~i~~~~~~~~~~ 247 (477)
|+++..+....+....|. .-|||||-+. ..++.++|||-|||++||++. |..||.+-.+.+.+-.+.+|... +
T Consensus 536 GLSR~~ed~~yYkaS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsDVI~~iEnGeRl---P 612 (974)
T KOG4257|consen 536 GLSRYLEDDAYYKASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSDVIGHIENGERL---P 612 (974)
T ss_pred chhhhccccchhhccccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccccceEEEecCCCCC---C
Confidence 999998776655544443 3499999987 579999999999999999887 99999998888887777776532 2
Q ss_pred CCCCCCHHHHHHHHHhcccCccccCCHHHHh
Q 042823 248 PWPSISSTAKDLVRRMLTKDPKRRITAAQVL 278 (477)
Q Consensus 248 ~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l 278 (477)
..|.+|+.+..++.+||..+|.+||++.++.
T Consensus 613 ~P~nCPp~LYslmskcWayeP~kRPrftei~ 643 (974)
T KOG4257|consen 613 CPPNCPPALYSLMSKCWAYEPSKRPRFTEIK 643 (974)
T ss_pred CCCCCChHHHHHHHHHhccCcccCCcHHHHH
Confidence 2368999999999999999999999988764
|
|
| >KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-39 Score=307.56 Aligned_cols=258 Identities=25% Similarity=0.393 Sum_probs=211.7
Q ss_pred cccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhcc-----CCCCeeEEEEEEE
Q 042823 20 DVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLS-----GQPNVVEFKSTYE 94 (477)
Q Consensus 20 ~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~-----~hpniv~~~~~~~ 94 (477)
.+-.+|.+....|+|-||+|..|.+...|+.||||+|..+..+. ..=..|+.+|.+|. +.-|+++++..|.
T Consensus 429 ~LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~M~----KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~ 504 (752)
T KOG0670|consen 429 LLDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEVMH----KTGLKELEILKKLNDADPEDKFHCLRLFRHFK 504 (752)
T ss_pred hhcceeEEEeccccceeeeeeeccccCCCCeeEEEEeecchHHh----hhhhHHHHHHHHhhccCchhhhHHHHHHHHhh
Confidence 44556667778999999999999999999999999998765433 23457899999985 2457999999999
Q ss_pred eCCeEEEEEeccCCCchHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeec
Q 042823 95 DETAVHVVMELCEGGDLFDRIIAKG---YNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDF 171 (477)
Q Consensus 95 ~~~~~~lv~e~~~gg~L~~~l~~~~---~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Df 171 (477)
..+++|||+|-+.- +|.+.|++-+ .+....++.++.|++-||..|-..||+|.||||+|||+. .....+|||||
T Consensus 505 hknHLClVFE~Lsl-NLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c~vlHaDIKPDNiLVN--E~k~iLKLCDf 581 (752)
T KOG0670|consen 505 HKNHLCLVFEPLSL-NLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKCGVLHADIKPDNILVN--ESKNILKLCDF 581 (752)
T ss_pred hcceeEEEehhhhc-hHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhcCeeecccCccceEec--cCcceeeeccC
Confidence 99999999999965 9999998855 467888999999999999999999999999999999992 34567999999
Q ss_pred CCccccCCCcceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCC-
Q 042823 172 GSALLFEEGQVYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPW- 249 (477)
Q Consensus 172 g~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~- 249 (477)
|.|.....+.. ..+.-+..|.|||++.| .|+...|+||+||+||||+||+..|.+.++..++...+.-...|+....
T Consensus 582 GSA~~~~enei-tPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~MLrl~me~KGk~p~KmlR 660 (752)
T KOG0670|consen 582 GSASFASENEI-TPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRTNNQMLRLFMELKGKFPNKMLR 660 (752)
T ss_pred ccccccccccc-cHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCCCcHHHHHHHHHhcCCCcHHHhh
Confidence 99988766543 44556778999999887 7999999999999999999999999999988887655432222211100
Q ss_pred ------------------------------------C------------CC-------CHHHHHHHHHhcccCccccCCH
Q 042823 250 ------------------------------------P------------SI-------SSTAKDLVRRMLTKDPKRRITA 274 (477)
Q Consensus 250 ------------------------------------~------------~~-------~~~~~~li~~~l~~dp~~R~s~ 274 (477)
| .+ -..+++|+.+||..||++|.|+
T Consensus 661 KgqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdLLdkml~LdP~KRit~ 740 (752)
T KOG0670|consen 661 KGQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDLLDKMLILDPEKRITV 740 (752)
T ss_pred hcchhhhhcccccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHHHHHHHHhccChhhcCCH
Confidence 0 01 2358899999999999999999
Q ss_pred HHHhcCcccCc
Q 042823 275 AQVLEHPWLRE 285 (477)
Q Consensus 275 ~~~l~h~~~~~ 285 (477)
.|+|.||||..
T Consensus 741 nqAL~HpFi~~ 751 (752)
T KOG0670|consen 741 NQALKHPFITE 751 (752)
T ss_pred HHHhcCCcccC
Confidence 99999999964
|
|
| >KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-37 Score=291.71 Aligned_cols=264 Identities=27% Similarity=0.432 Sum_probs=200.2
Q ss_pred ccccc-ccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCC-------CCeeEE
Q 042823 18 YEDVM-LHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQ-------PNVVEF 89 (477)
Q Consensus 18 ~~~~~-~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~h-------pniv~~ 89 (477)
++.|. .||.+.++||.|-|++||+|++..+.+.||+|+++.... ..+....||++++++..+ .+||++
T Consensus 72 GD~F~~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAqh----YtEaAlDEIklL~~v~~~Dp~~~~~~~VV~L 147 (590)
T KOG1290|consen 72 GDVFNGGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQH----YTEAALDEIKLLQQVREGDPNDPGKKCVVQL 147 (590)
T ss_pred cccccCceEEEEEeccccccceeEEEeeccCCeEEEEEEEehhhH----HHHHHHHHHHHHHHHHhcCCCCCCCceeeee
Confidence 45677 899999999999999999999999999999999864432 334456788888887643 379999
Q ss_pred EEEEE----eCCeEEEEEeccCCCchHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHc-CCeeccCCCCceeeeecCC
Q 042823 90 KSTYE----DETAVHVVMELCEGGDLFDRIIAK--GYNSERDAATVLRAIVNAVNVCHSM-GVMHRDLKPENFSFISRDD 162 (477)
Q Consensus 90 ~~~~~----~~~~~~lv~e~~~gg~L~~~l~~~--~~~~~~~~~~i~~qil~~L~~lH~~-~ivH~dlkp~Nil~~~~~~ 162 (477)
++.|. +..++++|+|++ |.+|+.+|... +.++...+++|++|||.||.|||.. ||||.||||+|||+...+.
T Consensus 148 lD~FkhsGpNG~HVCMVfEvL-GdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~ecgIIHTDlKPENvLl~~~e~ 226 (590)
T KOG1290|consen 148 LDHFKHSGPNGQHVCMVFEVL-GDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHRECGIIHTDLKPENVLLCSTEI 226 (590)
T ss_pred eccceecCCCCcEEEEEehhh-hhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHhcCccccCCCcceeeeecccc
Confidence 99995 467899999999 67999999875 4589999999999999999999975 9999999999999854200
Q ss_pred --------------------------------------------------------------------------------
Q 042823 163 -------------------------------------------------------------------------------- 162 (477)
Q Consensus 163 -------------------------------------------------------------------------------- 162 (477)
T Consensus 227 ~~~~~~~~a~e~~~~~p~~s~s~~~t~~d~~~~~~~~~~s~~~~k~~~kk~~r~~~~~~~~l~~~~~~~~~~~~~s~n~~ 306 (590)
T KOG1290|consen 227 DPAKDAREAGEATTSLPKMSPSAVSTRPDALQRMAAEPMSKSKFKKMKKKLKRQAKKLEASLAGLEGIEEEPNQESYNNE 306 (590)
T ss_pred chhhhhhhhccccccCCCCCcccccccccccchhhccccchhhHHHHHHHHhhhhhhhhhhhcccccccccccccccccc
Confidence
Q ss_pred --------------------------------------------------------------------------------
Q 042823 163 -------------------------------------------------------------------------------- 162 (477)
Q Consensus 163 -------------------------------------------------------------------------------- 162 (477)
T Consensus 307 ~~~n~~~~~v~~~~~~~~~~~~~~~~n~~~k~~e~~~~~~~sl~~~~~~~~~t~~~~~~~s~~s~~~~~~n~~v~p~~~~ 386 (590)
T KOG1290|consen 307 PRINGNESTVERSTLEEDSNENGNRENLPIKSPENFRGNNTSLPESQLRDSATPSDGSLSSPSSPGTIASNPLVNPDIPL 386 (590)
T ss_pred cCCCccccchhhcccccccccccCCccccccCccccccccccccchhcccccccccccccCcCCccccccccccCCCCCC
Confidence
Q ss_pred ---CCCEEEeecCCccccCCCcceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCC------hhh
Q 042823 163 ---NALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAET------KKG 232 (477)
Q Consensus 163 ---~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~------~~~ 232 (477)
...|||+|||-|.... ..+..-+.|..|+|||++.+ .|++.+||||++|++|||+||...|...+ ++.
T Consensus 387 ~~~di~vKIaDlGNACW~~--khFT~DIQTRQYRapEVllGsgY~~~ADiWS~AC~~FELaTGDyLFePhsG~~Y~rDED 464 (590)
T KOG1290|consen 387 PECDIRVKIADLGNACWVH--KHFTEDIQTRQYRAPEVLLGSGYSTSADIWSTACMAFELATGDYLFEPHSGENYSRDED 464 (590)
T ss_pred CccceeEEEeeccchhhhh--hhhchhhhhhhccCcceeecCCCCCchhHHHHHHHHHHhhcCceeecCCCCCCCCccHH
Confidence 0124566666554322 12334467889999999876 69999999999999999999999885432 111
Q ss_pred HHHHHH------------cCCcc---C----------CCCCCCC---------C----CHHHHHHHHHhcccCccccCCH
Q 042823 233 TYDAIL------------QGEID---F----------DTDPWPS---------I----SSTAKDLVRRMLTKDPKRRITA 274 (477)
Q Consensus 233 ~~~~i~------------~~~~~---~----------~~~~~~~---------~----~~~~~~li~~~l~~dp~~R~s~ 274 (477)
-+..|+ .|.+. | .-.+||- . ..++.+|+.-||+.+|++||||
T Consensus 465 HiA~i~ELLG~iPr~ia~~Gk~SRdFFnr~G~LrhI~~LK~WpL~~VL~eKY~~s~e~A~~fsdFL~PmLef~PeKR~tA 544 (590)
T KOG1290|consen 465 HIALIMELLGKIPRKIALGGKYSRDFFNRRGELRHIRRLKPWPLYEVLIEKYEWSEEDAQQFSDFLSPMLEFDPEKRPTA 544 (590)
T ss_pred HHHHHHHHHhhccHHHHhcCcchHhhhccccceecccccCCCcHHHHHHHHhCCCHHHHHHHHHHHHHHHhcCccccccH
Confidence 111111 12111 0 0112331 2 3467899999999999999999
Q ss_pred HHHhcCcccCcCCC
Q 042823 275 AQVLEHPWLRESGE 288 (477)
Q Consensus 275 ~~~l~h~~~~~~~~ 288 (477)
.++|+|||+.....
T Consensus 545 ~~cl~hPwLn~~~~ 558 (590)
T KOG1290|consen 545 AQCLKHPWLNPVAG 558 (590)
T ss_pred HHHhcCccccCCCC
Confidence 99999999986544
|
|
| >smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-36 Score=282.17 Aligned_cols=242 Identities=42% Similarity=0.703 Sum_probs=205.3
Q ss_pred CCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEeccCCCchHHH
Q 042823 35 QFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDR 114 (477)
Q Consensus 35 ~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~ 114 (477)
+||.||+|.+..+++.+|+|++....... ....+.+|++.+..+ +||||+++++.+......++++||+++++|.++
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~--~~~~~~~e~~~~~~l-~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~ 77 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKK--KRERILREISILKKL-KHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDL 77 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEeccccccc--HHHHHHHHHHHHHhC-CCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHH
Confidence 58999999999889999999986543221 157788999999999 899999999999999999999999999999999
Q ss_pred HHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCCCcceecccccccccc
Q 042823 115 IIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIA 194 (477)
Q Consensus 115 l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~a 194 (477)
+.....++...+..++.+++.++.+||+.+++|+||+|.||++ +.++.++|+|||.+.............+++.|+|
T Consensus 78 ~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~i~~~ni~~---~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~ 154 (244)
T smart00220 78 LKKRGRLSEDEARFYARQILSALEYLHSNGIIHRDLKPENILL---DEDGHVKLADFGLARQLDPGGLLTTFVGTPEYMA 154 (244)
T ss_pred HHhccCCCHHHHHHHHHHHHHHHHHHHHcCeecCCcCHHHeEE---CCCCcEEEccccceeeeccccccccccCCcCCCC
Confidence 9887768999999999999999999999999999999999999 6678999999999987765444455678899999
Q ss_pred hhhhh-hhcCCccchHhHHHHHHHHhhCCCCCCC-CChhhHHHHHHcCCccCCCCCCCCCCHHHHHHHHHhcccCccccC
Q 042823 195 PEVLR-RRYGKEIDIWSAGVILYILLSGVPPFWA-ETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRI 272 (477)
Q Consensus 195 PE~~~-~~~~~~~DiwslG~il~~l~tg~~pf~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~ 272 (477)
||.+. ..++.++||||+|+++++|++|..||.. .........+........ ..+..++..+.+++.+||..+|++||
T Consensus 155 pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~l~~~p~~Rp 233 (244)
T smart00220 155 PEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQLLELFKKIGKPKPPFP-PPEWKISPEAKDLIRKLLVKDPEKRL 233 (244)
T ss_pred HHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhccCCCCc-cccccCCHHHHHHHHHHccCCchhcc
Confidence 99986 4678899999999999999999999977 444444444444333322 22222889999999999999999999
Q ss_pred CHHHHhcCccc
Q 042823 273 TAAQVLEHPWL 283 (477)
Q Consensus 273 s~~~~l~h~~~ 283 (477)
++.++++||||
T Consensus 234 ~~~~~~~~~~~ 244 (244)
T smart00220 234 TAEEALQHPFF 244 (244)
T ss_pred CHHHHhhCCCC
Confidence 99999999997
|
Phosphotransferases. Serine or threonine-specific kinase subfamily. |
| >KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-39 Score=282.66 Aligned_cols=257 Identities=26% Similarity=0.421 Sum_probs=210.2
Q ss_pred cccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCC-----e
Q 042823 24 HYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDET-----A 98 (477)
Q Consensus 24 ~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~-----~ 98 (477)
+-+-.++||.|+||+||.+++..+|+.||+|++.. ...+......+.+|++++... .|.|++...+..+... .
T Consensus 54 Di~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pn-vfq~L~s~krvFre~kmLcfF-kHdNVLSaLDILQPph~dfFqE 131 (449)
T KOG0664|consen 54 DIQPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPN-VFQNLASCKRVFREIKMLSSF-RHDNVLSLLDILQPANPSFFQE 131 (449)
T ss_pred cCCCCCcccccceeEEEeccCCCCccchhHhhcch-HHHHHHHHHHHHHHHHHHHhh-ccccHHHHHHhcCCCCchHHHH
Confidence 34457899999999999999999999999998753 233445567888999999998 6999999988876442 4
Q ss_pred EEEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccC
Q 042823 99 VHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFE 178 (477)
Q Consensus 99 ~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~ 178 (477)
+|.|+|++.. +|..++.....++...++-+++||+.||+|||+.+|.||||||.|.|+ ++++.+||||||+|+..+
T Consensus 132 iYV~TELmQS-DLHKIIVSPQ~Ls~DHvKVFlYQILRGLKYLHsA~ILHRDIKPGNLLV---NSNCvLKICDFGLARvee 207 (449)
T KOG0664|consen 132 LYVLTELMQS-DLHKIIVSPQALTPDHVKVFVYQILRGLKYLHTANILHRDIKPGNLLV---NSNCILKICDFGLARTWD 207 (449)
T ss_pred HHHHHHHHHh-hhhheeccCCCCCcchhhhhHHHHHhhhHHHhhcchhhccCCCccEEe---ccCceEEecccccccccc
Confidence 6899999965 999999998999999999999999999999999999999999999999 899999999999998775
Q ss_pred CCc--ceecccccccccchhhhhh--hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcC--------------
Q 042823 179 EGQ--VYRDIVGSGFYIAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQG-------------- 240 (477)
Q Consensus 179 ~~~--~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~-------------- 240 (477)
... .....+-|-+|+|||++.| .|+.++||||+|||+.||+..+..|...++.+.++.|..-
T Consensus 208 ~d~~~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~EaMr~ACE 287 (449)
T KOG0664|consen 208 QRDRLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQEAMKYACE 287 (449)
T ss_pred hhhhhhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcHHHHHHHhh
Confidence 543 2334467889999999976 5999999999999999999999999888776666555431
Q ss_pred ---------CccCCCCC--C-----CCCCHHHHHHHHHhcccCccccCCHHHHhcCcccCcC
Q 042823 241 ---------EIDFDTDP--W-----PSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRES 286 (477)
Q Consensus 241 ---------~~~~~~~~--~-----~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~ 286 (477)
....+... + ..-..+...++.++|..||++|.+..+++.|++..+.
T Consensus 288 GAk~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~~~~~e~ 349 (449)
T KOG0664|consen 288 GAKNHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHRYLEEG 349 (449)
T ss_pred hhHHHhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhccccccccc
Confidence 11100000 0 0123467889999999999999999999999998764
|
|
| >PLN03224 probable serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.1e-37 Score=305.42 Aligned_cols=259 Identities=20% Similarity=0.289 Sum_probs=186.0
Q ss_pred cccccccccccccCCeEEEEEEEc----------------cCCceEEEEEeecCCccch-----------hhHHHHHHHH
Q 042823 22 MLHYFFGRMLGRGQFGVSYLCTEN----------------STNRPYACKSIAKKPKMRL-----------AENDMIRREI 74 (477)
Q Consensus 22 ~~~Y~~~~~iG~G~~g~V~~~~~~----------------~~~~~~aiK~~~~~~~~~~-----------~~~~~~~~e~ 74 (477)
.++|.+.++||+|+||+||+|... ..++.||||.+........ ...+....|+
T Consensus 144 ~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE~ 223 (507)
T PLN03224 144 SDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVEA 223 (507)
T ss_pred ccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHHH
Confidence 668999999999999999999752 3456799999854321100 0111223466
Q ss_pred HHHHhccCCC----CeeEEEEEEEe--------CCeEEEEEeccCCCchHHHHHHcC-----------------------
Q 042823 75 QIRLYLSGQP----NVVEFKSTYED--------ETAVHVVMELCEGGDLFDRIIAKG----------------------- 119 (477)
Q Consensus 75 ~~~~~l~~hp----niv~~~~~~~~--------~~~~~lv~e~~~gg~L~~~l~~~~----------------------- 119 (477)
.++.++.++| ++++++++|.. .+..++||||+++++|.+++....
T Consensus 224 ~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~~ 303 (507)
T PLN03224 224 YMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMPQ 303 (507)
T ss_pred HHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhccc
Confidence 6666664322 34667776643 356899999999999999886421
Q ss_pred -CCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCCCcceec--ccccccccchh
Q 042823 120 -YNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRD--IVGSGFYIAPE 196 (477)
Q Consensus 120 -~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~--~~gt~~y~aPE 196 (477)
.++...++.++.|++.||.|||+.+|+||||||+||++ +.++.+||+|||++........... ..+|+.|+|||
T Consensus 304 ~~~~~~~~~~i~~ql~~aL~~lH~~~ivHrDLKp~NILl---~~~~~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~aPE 380 (507)
T PLN03224 304 DKRDINVIKGVMRQVLTGLRKLHRIGIVHRDIKPENLLV---TVDGQVKIIDFGAAVDMCTGINFNPLYGMLDPRYSPPE 380 (507)
T ss_pred ccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCchHhEEE---CCCCcEEEEeCcCccccccCCccCccccCCCcceeChh
Confidence 12456788899999999999999999999999999999 6678899999999876543322222 23488999999
Q ss_pred hhhhh---------------------cC--CccchHhHHHHHHHHhhCCC-CCCCCCh-----------hhHHHHHHcCC
Q 042823 197 VLRRR---------------------YG--KEIDIWSAGVILYILLSGVP-PFWAETK-----------KGTYDAILQGE 241 (477)
Q Consensus 197 ~~~~~---------------------~~--~~~DiwslG~il~~l~tg~~-pf~~~~~-----------~~~~~~i~~~~ 241 (477)
++... |+ .+.||||+||++|+|++|.. ||..... ...+..+....
T Consensus 381 ~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r~~~~~~ 460 (507)
T PLN03224 381 ELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWRMYKGQK 460 (507)
T ss_pred hhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHHhhcccC
Confidence 87421 22 34799999999999999875 6643211 11111222233
Q ss_pred ccCCCCCCCCCCHHHHHHHHHhcccCc---cccCCHHHHhcCcccCc
Q 042823 242 IDFDTDPWPSISSTAKDLVRRMLTKDP---KRRITAAQVLEHPWLRE 285 (477)
Q Consensus 242 ~~~~~~~~~~~~~~~~~li~~~l~~dp---~~R~s~~~~l~h~~~~~ 285 (477)
..+ ..++..++.+++|+.+||..+| .+|+|++|+|+||||..
T Consensus 461 ~~~--~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~Hp~f~~ 505 (507)
T PLN03224 461 YDF--SLLDRNKEAGWDLACKLITKRDQANRGRLSVGQALSHRFFLP 505 (507)
T ss_pred CCc--ccccccChHHHHHHHHHhccCCCCcccCCCHHHHhCCCCcCC
Confidence 333 3467789999999999999866 68999999999999965
|
|
| >KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-37 Score=299.98 Aligned_cols=256 Identities=23% Similarity=0.263 Sum_probs=214.3
Q ss_pred ccccccccccccccccCCeEEEEEEEccC-C--ceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEe
Q 042823 19 EDVMLHYFFGRMLGRGQFGVSYLCTENST-N--RPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYED 95 (477)
Q Consensus 19 ~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~-~--~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~ 95 (477)
-.-.++..+.+.||+|+||+|++|.|+.. | ..||||.+..... ....+.+.+|+.++.+| +|||++++|++..+
T Consensus 106 lIpee~i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l--~~~mddflrEas~M~~L-~H~hliRLyGvVl~ 182 (1039)
T KOG0199|consen 106 LIPEEQIKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSL--NAIMDDFLREASHMLKL-QHPHLIRLYGVVLD 182 (1039)
T ss_pred eccHHHHHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCcc--chhHHHHHHHHHHHHhc-cCcceeEEeeeecc
Confidence 34455667789999999999999998643 3 3589999865433 23678899999999999 79999999999987
Q ss_pred CCeEEEEEeccCCCchHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCC
Q 042823 96 ETAVHVVMELCEGGDLFDRIIA--KGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGS 173 (477)
Q Consensus 96 ~~~~~lv~e~~~gg~L~~~l~~--~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~ 173 (477)
....+|+|+|++|||++.|.+ ...+.......++.||+.||.||.++++|||||-..|+++ .....|||||||+
T Consensus 183 -qp~mMV~ELaplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLeskrlvHRDLAARNlll---asprtVKI~DFGL 258 (1039)
T KOG0199|consen 183 -QPAMMVFELAPLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESKRLVHRDLAARNLLL---ASPRTVKICDFGL 258 (1039)
T ss_pred -chhhHHhhhcccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhee---cccceeeeecccc
Confidence 678899999999999999987 3457788888999999999999999999999999999999 5577899999999
Q ss_pred ccccCCCcceecccc----cccccchhhhh-hhcCCccchHhHHHHHHHHhh-CCCCCCCCChhhHHHHHHcCCccCCCC
Q 042823 174 ALLFEEGQVYRDIVG----SGFYIAPEVLR-RRYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQGEIDFDTD 247 (477)
Q Consensus 174 a~~~~~~~~~~~~~g----t~~y~aPE~~~-~~~~~~~DiwslG~il~~l~t-g~~pf~~~~~~~~~~~i~~~~~~~~~~ 247 (477)
.+.+..+.....+.+ ...|+|||.++ ..++.++|||++||++|||+| |..||.+.....++.+|-.++.- +.
T Consensus 259 mRaLg~ned~Yvm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~qIL~~iD~~erL-pR- 336 (1039)
T KOG0199|consen 259 MRALGENEDMYVMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGIQILKNIDAGERL-PR- 336 (1039)
T ss_pred eeccCCCCcceEecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCHHHHHHhccccccC-CC-
Confidence 998866554433322 33599999997 679999999999999999998 89999999999998888755432 22
Q ss_pred CCCCCCHHHHHHHHHhcccCccccCCHHHHhcCcccC
Q 042823 248 PWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLR 284 (477)
Q Consensus 248 ~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~ 284 (477)
.+.+|+++.++++.||..+|.+|||+..+...-+..
T Consensus 337 -Pk~csedIY~imk~cWah~paDRptFsair~~~~l~ 372 (1039)
T KOG0199|consen 337 -PKYCSEDIYQIMKNCWAHNPADRPTFSAIREDLVLA 372 (1039)
T ss_pred -CCCChHHHHHHHHHhccCCccccccHHHHHHhHHHH
Confidence 246899999999999999999999999987555444
|
|
| >KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-37 Score=307.20 Aligned_cols=250 Identities=31% Similarity=0.475 Sum_probs=199.7
Q ss_pred ccccccccccCCe-EEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEE
Q 042823 25 YFFGRMLGRGQFG-VSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVVM 103 (477)
Q Consensus 25 Y~~~~~iG~G~~g-~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~lv~ 103 (477)
|.-.+++|.|+.| .||+|.. .|+.||||.+... ......+|++.++.-.+|||||++|..-.+....||..
T Consensus 511 ~~~~eilG~Gs~Gt~Vf~G~y--e~R~VAVKrll~e------~~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIal 582 (903)
T KOG1027|consen 511 FSPKEILGYGSNGTVVFRGVY--EGREVAVKRLLEE------FFDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIAL 582 (903)
T ss_pred eccHHHcccCCCCcEEEEEee--CCceehHHHHhhH------hHHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEe
Confidence 3445789999998 5799986 6889999987532 34567899999999989999999999999999999999
Q ss_pred eccCCCchHHHHHHcCC----CCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecC--CCCCEEEeecCCcccc
Q 042823 104 ELCEGGDLFDRIIAKGY----NSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRD--DNALLKVTDFGSALLF 177 (477)
Q Consensus 104 e~~~gg~L~~~l~~~~~----~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~--~~~~~kl~Dfg~a~~~ 177 (477)
|+|. .+|.+++...+. ...-..+.++.|+++||++||+.+||||||||+|||+...+ ....++|+|||+++.+
T Consensus 583 ELC~-~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl 661 (903)
T KOG1027|consen 583 ELCA-CSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSLKIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKL 661 (903)
T ss_pred hHhh-hhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhcccccccCCCceEEEEccCCCcceeEEeccccccccc
Confidence 9996 599999987421 11134578899999999999999999999999999997643 3457999999999887
Q ss_pred CCCcc----eecccccccccchhhhhhh-cCCccchHhHHHHHHHHhhC-CCCCCCCChhhHHHHHHcCCccCCCCCCCC
Q 042823 178 EEGQV----YRDIVGSGFYIAPEVLRRR-YGKEIDIWSAGVILYILLSG-VPPFWAETKKGTYDAILQGEIDFDTDPWPS 251 (477)
Q Consensus 178 ~~~~~----~~~~~gt~~y~aPE~~~~~-~~~~~DiwslG~il~~l~tg-~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 251 (477)
..++. ..+..||..|+|||++.+. -+.++||+|+||++|+.++| ..||...- +.-.+|+.+......-. +.
T Consensus 662 ~~~~sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~--~R~~NIl~~~~~L~~L~-~~ 738 (903)
T KOG1027|consen 662 AGGKSSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSL--ERQANILTGNYTLVHLE-PL 738 (903)
T ss_pred CCCcchhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchH--HhhhhhhcCccceeeec-cC
Confidence 65432 3456799999999999753 56689999999999999986 99995432 23346777665543211 11
Q ss_pred CCHHHHHHHHHhcccCccccCCHHHHhcCcccCcC
Q 042823 252 ISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRES 286 (477)
Q Consensus 252 ~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~ 286 (477)
...++++||.+|++++|..||+|.++|.||+|-..
T Consensus 739 ~d~eA~dLI~~ml~~dP~~RPsa~~VL~HPlFW~~ 773 (903)
T KOG1027|consen 739 PDCEAKDLISRMLNPDPQLRPSATDVLNHPLFWDS 773 (903)
T ss_pred chHHHHHHHHHhcCCCcccCCCHHHHhCCCccCCh
Confidence 12289999999999999999999999999999764
|
|
| >KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-37 Score=303.78 Aligned_cols=247 Identities=23% Similarity=0.371 Sum_probs=214.8
Q ss_pred cccccccccccCCeEEEEEEEccCC---ceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEE
Q 042823 24 HYFFGRMLGRGQFGVSYLCTENSTN---RPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVH 100 (477)
Q Consensus 24 ~Y~~~~~iG~G~~g~V~~~~~~~~~---~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~ 100 (477)
.-.|.++||.|.||.|++|+.+..| ..||||.++. .........+..|..|+-+. +||||+++.++......+.
T Consensus 630 ~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~--GytekqrrdFL~EAsIMGQF-dHPNIIrLEGVVTks~PvM 706 (996)
T KOG0196|consen 630 CVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKA--GYTEKQRRDFLSEASIMGQF-DHPNIIRLEGVVTKSKPVM 706 (996)
T ss_pred heEEEEEEecccccceecccccCCCCcceeEEEeeecc--CccHHHHhhhhhhhhhcccC-CCCcEEEEEEEEecCceeE
Confidence 3466789999999999999987665 5699999864 34455677899999999999 7999999999999999999
Q ss_pred EEEeccCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCC
Q 042823 101 VVMELCEGGDLFDRIIAK-GYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEE 179 (477)
Q Consensus 101 lv~e~~~gg~L~~~l~~~-~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~ 179 (477)
||.||+++|+|-.+|.++ +.++.-++..+++-|+.|++||-+.|+|||||-..|||+ +.+..+|++|||+++.+++
T Consensus 707 IiTEyMENGsLDsFLR~~DGqftviQLVgMLrGIAsGMkYLsdm~YVHRDLAARNILV---NsnLvCKVsDFGLSRvled 783 (996)
T KOG0196|consen 707 IITEYMENGSLDSFLRQNDGQFTVIQLVGMLRGIASGMKYLSDMNYVHRDLAARNILV---NSNLVCKVSDFGLSRVLED 783 (996)
T ss_pred EEhhhhhCCcHHHHHhhcCCceEeehHHHHHHHHHHHhHHHhhcCchhhhhhhhheee---ccceEEEeccccceeeccc
Confidence 999999999999999875 678999999999999999999999999999999999999 8999999999999998755
Q ss_pred Cc-ceeccc-c--cccccchhhhh-hhcCCccchHhHHHHHHHHhh-CCCCCCCCChhhHHHHHHcCCccCCCCCCCCCC
Q 042823 180 GQ-VYRDIV-G--SGFYIAPEVLR-RRYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQGEIDFDTDPWPSIS 253 (477)
Q Consensus 180 ~~-~~~~~~-g--t~~y~aPE~~~-~~~~~~~DiwslG~il~~l~t-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 253 (477)
+. ...+.. | ...|.|||.+. .+++.++||||+|+++||.++ |..||+..++++.+..|.++- .-++...+|
T Consensus 784 d~~~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSNQdVIkaIe~gy---RLPpPmDCP 860 (996)
T KOG0196|consen 784 DPEAAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEQGY---RLPPPMDCP 860 (996)
T ss_pred CCCccccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccccchHHHHHHHHhcc---CCCCCCCCc
Confidence 44 222222 2 35699999986 689999999999999999776 999999999999999998863 223336899
Q ss_pred HHHHHHHHHhcccCccccCCHHHHhc
Q 042823 254 STAKDLVRRMLTKDPKRRITAAQVLE 279 (477)
Q Consensus 254 ~~~~~li~~~l~~dp~~R~s~~~~l~ 279 (477)
..+..|+..||++|..+||++.|++.
T Consensus 861 ~aL~qLMldCWqkdR~~RP~F~qiV~ 886 (996)
T KOG0196|consen 861 AALYQLMLDCWQKDRNRRPKFAQIVS 886 (996)
T ss_pred HHHHHHHHHHHHHHhhcCCCHHHHHH
Confidence 99999999999999999999999986
|
|
| >KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-36 Score=289.06 Aligned_cols=254 Identities=22% Similarity=0.293 Sum_probs=207.9
Q ss_pred ccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCe
Q 042823 19 EDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETA 98 (477)
Q Consensus 19 ~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~ 98 (477)
+-..++-.++++||+|.||.|.+|.- ..+.+||+|+++.... ......+.+|++++.+| .|||||+++++|..++.
T Consensus 534 EfPRs~L~~~ekiGeGqFGEVhLCev-eg~lkVAVK~Lr~~a~--~~~r~~F~kEIkiLsqL-khPNIveLvGVC~~DeP 609 (807)
T KOG1094|consen 534 EFPRSRLRFKEKIGEGQFGEVHLCEV-EGPLKVAVKILRPDAT--KNARNDFLKEIKILSRL-KHPNIVELLGVCVQDDP 609 (807)
T ss_pred hcchhheehhhhhcCcccceeEEEEe-cCceEEEEeecCcccc--hhHHHHHHHHHHHHhcc-CCCCeeEEEeeeecCCc
Confidence 34556678899999999999999975 3468999999865433 34467899999999999 79999999999999999
Q ss_pred EEEEEeccCCCchHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccc
Q 042823 99 VHVVMELCEGGDLFDRIIAKGY--NSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALL 176 (477)
Q Consensus 99 ~~lv~e~~~gg~L~~~l~~~~~--~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~ 176 (477)
+++|+||++.|+|.+++..+.. .......+|+.||++||+||.+.++|||||.+.|+|+ +.+.++||+|||+++-
T Consensus 610 icmI~EYmEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~nfVHrd~a~rNcLv---~~e~~iKiadfgmsR~ 686 (807)
T KOG1094|consen 610 LCMITEYMENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESLNFVHRDLATRNCLV---DGEFTIKIADFGMSRN 686 (807)
T ss_pred hHHHHHHHhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhhchhhccccccceee---cCcccEEecCcccccc
Confidence 9999999999999999988743 2344566799999999999999999999999999999 8999999999999985
Q ss_pred cCCCccee---cccccccccchhhh-hhhcCCccchHhHHHHHHHHhh--CCCCCCCCChhhHHHHHHcCCccCC----C
Q 042823 177 FEEGQVYR---DIVGSGFYIAPEVL-RRRYGKEIDIWSAGVILYILLS--GVPPFWAETKKGTYDAILQGEIDFD----T 246 (477)
Q Consensus 177 ~~~~~~~~---~~~gt~~y~aPE~~-~~~~~~~~DiwslG~il~~l~t--g~~pf~~~~~~~~~~~i~~~~~~~~----~ 246 (477)
+-.+.... ..+-...|||||.+ .++++.++|+|++|+++||+++ ...||...++++..++...-..... .
T Consensus 687 lysg~yy~vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~vven~~~~~~~~~~~~~l 766 (807)
T KOG1094|consen 687 LYSGDYYRVQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQVVENAGEFFRDQGRQVVL 766 (807)
T ss_pred cccCCceeeecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHHHHHhhhhhcCCCCcceec
Confidence 53333222 23446789999976 5899999999999999999775 7889988888877766543211111 1
Q ss_pred CCCCCCCHHHHHHHHHhcccCccccCCHHHHhc
Q 042823 247 DPWPSISSTAKDLVRRMLTKDPKRRITAAQVLE 279 (477)
Q Consensus 247 ~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~ 279 (477)
...+-++..+.+++.+||..+.++|||++++..
T Consensus 767 ~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~ 799 (807)
T KOG1094|consen 767 SRPPACPQGLYELMLRCWRRESEQRPSFEQLHL 799 (807)
T ss_pred cCCCcCcHHHHHHHHHHhchhhhcCCCHHHHHH
Confidence 112457899999999999999999999999853
|
|
| >KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-36 Score=288.50 Aligned_cols=252 Identities=21% Similarity=0.323 Sum_probs=212.3
Q ss_pred cccccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEe
Q 042823 16 KAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYED 95 (477)
Q Consensus 16 ~~~~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~ 95 (477)
+.|+.-+.+.....+||-|.||.||.++|+...-.||||.++.. ..+..++..|..+++.+ .|||+|++.++|..
T Consensus 260 DkWEmeRtdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKED----tMeveEFLkEAAvMKei-kHpNLVqLLGVCT~ 334 (1157)
T KOG4278|consen 260 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED----TMEVEEFLKEAAVMKEI-KHPNLVQLLGVCTH 334 (1157)
T ss_pred chhhccchheeeeeccCCCcccceeeeeeeccceeeehhhhhhc----chhHHHHHHHHHHHHhh-cCccHHHHhhhhcc
Confidence 34444445556678999999999999999999999999988543 34678899999999999 79999999999999
Q ss_pred CCeEEEEEeccCCCchHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCC
Q 042823 96 ETAVHVVMELCEGGDLFDRIIAKG--YNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGS 173 (477)
Q Consensus 96 ~~~~~lv~e~~~gg~L~~~l~~~~--~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~ 173 (477)
+..+|||+||+..|+|++||.... .++.-....++.||.+|+.||..+++|||||-..|.|+ .++..||++|||+
T Consensus 335 EpPFYIiTEfM~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkknFIHRDLAARNCLV---gEnhiVKvADFGL 411 (1157)
T KOG4278|consen 335 EPPFYIITEFMCYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLV---GENHIVKVADFGL 411 (1157)
T ss_pred CCCeEEEEecccCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhccc---cccceEEeeccch
Confidence 999999999999999999998754 35666777899999999999999999999999999999 8888999999999
Q ss_pred ccccCCCcceecccc---cccccchhhhh-hhcCCccchHhHHHHHHHHhh-CCCCCCCCChhhHHHHHHcCCccCCCCC
Q 042823 174 ALLFEEGQVYRDIVG---SGFYIAPEVLR-RRYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQGEIDFDTDP 248 (477)
Q Consensus 174 a~~~~~~~~~~~~~g---t~~y~aPE~~~-~~~~~~~DiwslG~il~~l~t-g~~pf~~~~~~~~~~~i~~~~~~~~~~~ 248 (477)
++...... +....| ..-|.|||-+. ..++.++|||+|||+|||+.| |-.||.+-...+++..+.++ +.+..
T Consensus 412 sRlMtgDT-YTAHAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGidlSqVY~LLEkg-yRM~~-- 487 (1157)
T KOG4278|consen 412 SRLMTGDT-YTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYGLLEKG-YRMDG-- 487 (1157)
T ss_pred hhhhcCCc-eecccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCccHHHHHHHHhcc-ccccC--
Confidence 99876543 233334 34599999885 568999999999999999998 88899888777776655443 33333
Q ss_pred CCCCCHHHHHHHHHhcccCccccCCHHHHhc
Q 042823 249 WPSISSTAKDLVRRMLTKDPKRRITAAQVLE 279 (477)
Q Consensus 249 ~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~ 279 (477)
...+++...+|++.||+++|.+||++.++-+
T Consensus 488 PeGCPpkVYeLMraCW~WsPsDRPsFaeiHq 518 (1157)
T KOG4278|consen 488 PEGCPPKVYELMRACWNWSPSDRPSFAEIHQ 518 (1157)
T ss_pred CCCCCHHHHHHHHHHhcCCcccCccHHHHHH
Confidence 3579999999999999999999999998853
|
|
| >KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-37 Score=301.40 Aligned_cols=260 Identities=26% Similarity=0.406 Sum_probs=221.7
Q ss_pred cccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeE
Q 042823 20 DVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAV 99 (477)
Q Consensus 20 ~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~ 99 (477)
+..++|.+...+|+|.||.||+|+++.++...|+|+++..+... ...+..|+-+++.. +|||||-+++.|-....+
T Consensus 12 nP~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd---~~~iqqei~~~~dc-~h~nivay~gsylr~dkl 87 (829)
T KOG0576|consen 12 NPQDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDD---FSGIQQEIGMLRDC-RHPNIVAYFGSYLRRDKL 87 (829)
T ss_pred CCccchhheeeecCCcccchhhhcccccCchhhheeeeccCCcc---ccccccceeeeecC-CCcChHHHHhhhhhhcCc
Confidence 77889999999999999999999999999999999998776544 34466788887777 799999999999999999
Q ss_pred EEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCC
Q 042823 100 HVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEE 179 (477)
Q Consensus 100 ~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~ 179 (477)
+|.||||.||+|.+.-.-.+.+++.+++..++..+.||+|||+.|-+|||||-.||++ .+.+.+|++|||.+..+.-
T Consensus 88 wicMEycgggslQdiy~~TgplselqiayvcRetl~gl~ylhs~gk~hRdiKGanill---td~gDvklaDfgvsaqita 164 (829)
T KOG0576|consen 88 WICMEYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLKYLHSQGKIHRDIKGANILL---TDEGDVKLADFGVSAQITA 164 (829)
T ss_pred EEEEEecCCCcccceeeecccchhHHHHHHHhhhhccchhhhcCCcccccccccceee---cccCceeecccCchhhhhh
Confidence 9999999999999988888999999999999999999999999999999999999999 7888999999998876543
Q ss_pred Cc-ceecccccccccchhhh----hhhcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCC-CCCCCCCC
Q 042823 180 GQ-VYRDIVGSGFYIAPEVL----RRRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFD-TDPWPSIS 253 (477)
Q Consensus 180 ~~-~~~~~~gt~~y~aPE~~----~~~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~-~~~~~~~~ 253 (477)
.. ...++.|||+|||||+. .+.|...+|||++|+...++---++|-........+....+..+..+ ...-...+
T Consensus 165 ti~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpmr~l~LmTkS~~qpp~lkDk~kws 244 (829)
T KOG0576|consen 165 TIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPMRALFLMTKSGFQPPTLKDKTKWS 244 (829)
T ss_pred hhhhhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchHHHHHHhhccCCCCCcccCCccch
Confidence 22 23568999999999986 36799999999999999999998988766555544443333322211 11123468
Q ss_pred HHHHHHHHHhcccCccccCCHHHHhcCcccCcC
Q 042823 254 STAKDLVRRMLTKDPKRRITAAQVLEHPWLRES 286 (477)
Q Consensus 254 ~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~ 286 (477)
+.+.+|++.+|.++|.+|||++.+|+|||....
T Consensus 245 ~~fh~fvK~altknpKkRptaeklL~h~fvs~~ 277 (829)
T KOG0576|consen 245 EFFHNFVKGALTKNPKKRPTAEKLLQHPFVSQT 277 (829)
T ss_pred HHHHHHHHHHhcCCCccCCChhhheeceeeccc
Confidence 999999999999999999999999999999765
|
|
| >KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-35 Score=249.64 Aligned_cols=217 Identities=23% Similarity=0.295 Sum_probs=182.5
Q ss_pred cccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCC
Q 042823 18 YEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDET 97 (477)
Q Consensus 18 ~~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~ 97 (477)
.+.-.+...-+..||+|++|.|-+.+|..+|+..|+|.+.... +..+...+.+|+.+..+..++|.+|.+|+.+....
T Consensus 41 ~eV~ad~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tv--n~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~reg 118 (282)
T KOG0984|consen 41 FEVPADDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATV--NSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREG 118 (282)
T ss_pred cccchhhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhc--ChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccc
Confidence 3444555666788999999999999999999999999997543 35667788899999888889999999999999999
Q ss_pred eEEEEEeccCCCchHHH----HHHcCCCCHHHHHHHHHHHHHHHHHHHHc-CCeeccCCCCceeeeecCCCCCEEEeecC
Q 042823 98 AVHVVMELCEGGDLFDR----IIAKGYNSERDAATVLRAIVNAVNVCHSM-GVMHRDLKPENFSFISRDDNALLKVTDFG 172 (477)
Q Consensus 98 ~~~lv~e~~~gg~L~~~----l~~~~~~~~~~~~~i~~qil~~L~~lH~~-~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg 172 (477)
.++|.||.+.- ||..+ +.+.+.++|..+-+|+..++.||.|||++ .++|||+||+|||+ +..|.||+||||
T Consensus 119 dvwIcME~M~t-Sldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL~vIHRDvKPsNiLI---n~~GqVKiCDFG 194 (282)
T KOG0984|consen 119 DVWICMELMDT-SLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKLSVIHRDVKPSNILI---NYDGQVKICDFG 194 (282)
T ss_pred cEEEeHHHhhh-hHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHhhhhhccCCcceEEE---ccCCcEEEcccc
Confidence 99999999965 77443 34467899999999999999999999987 89999999999999 889999999999
Q ss_pred CccccCCCcceecccccccccchhhhh-----hhcCCccchHhHHHHHHHHhhCCCCCCCC-ChhhHHHHHHcC
Q 042823 173 SALLFEEGQVYRDIVGSGFYIAPEVLR-----RRYGKEIDIWSAGVILYILLSGVPPFWAE-TKKGTYDAILQG 240 (477)
Q Consensus 173 ~a~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~DiwslG~il~~l~tg~~pf~~~-~~~~~~~~i~~~ 240 (477)
++-.+.++-...-..|...|||||.+. ..|+-++||||||++++||.+++.||..- ++-+++.++...
T Consensus 195 IsG~L~dSiAkt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w~tpF~qLkqvVee 268 (282)
T KOG0984|consen 195 ISGYLVDSIAKTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESWGTPFQQLKQVVEE 268 (282)
T ss_pred cceeehhhhHHHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccccCCHHHHHHHHhcC
Confidence 998876654444457888899999985 25899999999999999999999999543 445555555544
|
|
| >PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.5e-35 Score=321.26 Aligned_cols=243 Identities=22% Similarity=0.249 Sum_probs=184.0
Q ss_pred cccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeE
Q 042823 20 DVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAV 99 (477)
Q Consensus 20 ~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~ 99 (477)
.+...|...+.||+|+||.||+|.++.++..||+|.+...... ...|+.++.++ +|||||++++++.+....
T Consensus 687 ~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~-------~~~~~~~l~~l-~HpnIv~~~~~~~~~~~~ 758 (968)
T PLN00113 687 DILSSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNSI-------PSSEIADMGKL-QHPNIVKLIGLCRSEKGA 758 (968)
T ss_pred HHHhhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCccc-------cHHHHHHHhhC-CCCCcceEEEEEEcCCCC
Confidence 3445667778999999999999999999999999988543221 12457778888 799999999999999999
Q ss_pred EEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---HcCCeeccCCCCceeeeecCCCCCEEEeecCCccc
Q 042823 100 HVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCH---SMGVMHRDLKPENFSFISRDDNALLKVTDFGSALL 176 (477)
Q Consensus 100 ~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH---~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~ 176 (477)
|+||||++||+|.+++.. ++...+..++.|++.||.||| +.+|+||||||+||++ +.....+++ ||.+..
T Consensus 759 ~lv~Ey~~~g~L~~~l~~---l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~---~~~~~~~~~-~~~~~~ 831 (968)
T PLN00113 759 YLIHEYIEGKNLSEVLRN---LSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIII---DGKDEPHLR-LSLPGL 831 (968)
T ss_pred EEEEeCCCCCcHHHHHhc---CCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEE---CCCCceEEE-eccccc
Confidence 999999999999999853 788899999999999999999 6699999999999998 555556654 655433
Q ss_pred cCCCcceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCCh--hhHHHHHH--cCCcc----CCCC
Q 042823 177 FEEGQVYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETK--KGTYDAIL--QGEID----FDTD 247 (477)
Q Consensus 177 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~--~~~~~~i~--~~~~~----~~~~ 247 (477)
.... ....||+.|+|||++.+ .++.++||||+||++|||+||+.||..... ........ ..... .++.
T Consensus 832 ~~~~---~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 908 (968)
T PLN00113 832 LCTD---TKCFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYSDCHLDMWIDPS 908 (968)
T ss_pred cccC---CCccccccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhcCccchhheeCcc
Confidence 2211 23368899999999864 689999999999999999999999854321 11111100 00000 0000
Q ss_pred ---CC---CCCCHHHHHHHHHhcccCccccCCHHHHhcC
Q 042823 248 ---PW---PSISSTAKDLVRRMLTKDPKRRITAAQVLEH 280 (477)
Q Consensus 248 ---~~---~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h 280 (477)
.. +....++.+++.+||+.||++|||+.++++.
T Consensus 909 ~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~ 947 (968)
T PLN00113 909 IRGDVSVNQNEIVEVMNLALHCTATDPTARPCANDVLKT 947 (968)
T ss_pred ccCCCCccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHH
Confidence 00 0112356789999999999999999999864
|
|
| >KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-35 Score=271.59 Aligned_cols=260 Identities=29% Similarity=0.464 Sum_probs=202.9
Q ss_pred ccccccccccccccccccCCeEEEEEEEcc---CCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEE
Q 042823 17 AYEDVMLHYFFGRMLGRGQFGVSYLCTENS---TNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTY 93 (477)
Q Consensus 17 ~~~~~~~~Y~~~~~iG~G~~g~V~~~~~~~---~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~ 93 (477)
..-.+...|.++.+||+|.|++||+|.+.. .+..||+|.+.... ...++.+|++++..+.++.||+++.+++
T Consensus 30 ~~p~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts-----~p~ri~~El~~L~~~gG~~ni~~~~~~~ 104 (418)
T KOG1167|consen 30 DIPFISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTS-----SPSRILNELEMLYRLGGSDNIIKLNGCF 104 (418)
T ss_pred hhhhhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeeccccc-----CchHHHHHHHHHHHhccchhhhcchhhh
Confidence 344567789999999999999999998876 78899999986543 2356899999999999999999999999
Q ss_pred EeCCeEEEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCC
Q 042823 94 EDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGS 173 (477)
Q Consensus 94 ~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~ 173 (477)
..++.+.+||||++..+..++... ++..++..+++.++.||.++|++|||||||||+|+++.. ..+.-.|+|||+
T Consensus 105 rnnd~v~ivlp~~~H~~f~~l~~~---l~~~~i~~Yl~~ll~Al~~~h~~GIvHRDiKpsNFL~n~--~t~rg~LvDFgL 179 (418)
T KOG1167|consen 105 RNNDQVAIVLPYFEHDRFRDLYRS---LSLAEIRWYLRNLLKALAHLHKNGIVHRDIKPSNFLYNR--RTQRGVLVDFGL 179 (418)
T ss_pred ccCCeeEEEecccCccCHHHHHhc---CCHHHHHHHHHHHHHHhhhhhccCccccCCCcccccccc--ccCCceEEechh
Confidence 999999999999999877776643 568899999999999999999999999999999998843 345668899999
Q ss_pred ccccC-----------------C-----------------Ccce-----------ecccccccccchhhhhh--hcCCcc
Q 042823 174 ALLFE-----------------E-----------------GQVY-----------RDIVGSGFYIAPEVLRR--RYGKEI 206 (477)
Q Consensus 174 a~~~~-----------------~-----------------~~~~-----------~~~~gt~~y~aPE~~~~--~~~~~~ 206 (477)
|.... + .... -...|||+|+|||++.. .-++++
T Consensus 180 A~~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~Qttai 259 (418)
T KOG1167|consen 180 AQRYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAI 259 (418)
T ss_pred HHHHHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCcc
Confidence 86110 0 0000 02369999999999864 578899
Q ss_pred chHhHHHHHHHHhhCCCCCCCCChh-hHHHHH--------------HcCC--c--------------cC-----------
Q 042823 207 DIWSAGVILYILLSGVPPFWAETKK-GTYDAI--------------LQGE--I--------------DF----------- 244 (477)
Q Consensus 207 DiwslG~il~~l~tg~~pf~~~~~~-~~~~~i--------------~~~~--~--------------~~----------- 244 (477)
||||.|||+.-++++..||....+. ..+..+ .-+. + .|
T Consensus 260 Diws~GVI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~~~~~~~ 339 (418)
T KOG1167|consen 260 DIWSAGVILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHIESIYKS 339 (418)
T ss_pred ceeeccceeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhccChhhcccc
Confidence 9999999999999999999543321 000000 0011 0 00
Q ss_pred -----CCCCC-CCCCHHHHHHHHHhcccCccccCCHHHHhcCcccCcC
Q 042823 245 -----DTDPW-PSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRES 286 (477)
Q Consensus 245 -----~~~~~-~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~ 286 (477)
....| ...+..+.+|+.+||..||.+|.|++++|+||||...
T Consensus 340 ~q~n~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALkHpFF~~~ 387 (418)
T KOG1167|consen 340 RQPNTEREIGSDVFPALLLDLLDKCLELNPQKRITAEDALKHPFFDEA 387 (418)
T ss_pred cccceeeccccccccHHHHHHHHHHccCChhhcccHHHHhcCcCCcch
Confidence 00011 1235589999999999999999999999999999843
|
|
| >KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-35 Score=281.36 Aligned_cols=200 Identities=32% Similarity=0.480 Sum_probs=174.9
Q ss_pred cccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhh-----HHHHHHHHHHHHhcc--CCCCeeEEEEEEEeC
Q 042823 24 HYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAE-----NDMIRREIQIRLYLS--GQPNVVEFKSTYEDE 96 (477)
Q Consensus 24 ~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~-----~~~~~~e~~~~~~l~--~hpniv~~~~~~~~~ 96 (477)
+|..++++|+|+||.|++|.|+.....|++|.|.|........ .-.+-.||+|+..|. .||||++++++|+++
T Consensus 562 ~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFEdd 641 (772)
T KOG1152|consen 562 DYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFEDD 641 (772)
T ss_pred cceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheeecC
Confidence 4999999999999999999999999999999997754322111 112446999999984 399999999999999
Q ss_pred CeEEEEEeccC-CCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCcc
Q 042823 97 TAVHVVMELCE-GGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSAL 175 (477)
Q Consensus 97 ~~~~lv~e~~~-gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~ 175 (477)
+++||+||--. |.+|++++..+..++|.++..|++|+..|+++||+.||||||||-+|+.+ +.+|.+||+|||.|.
T Consensus 642 d~yyl~te~hg~gIDLFd~IE~kp~m~E~eAk~IFkQV~agi~hlh~~~ivhrdikdenviv---d~~g~~klidfgsaa 718 (772)
T KOG1152|consen 642 DYYYLETEVHGEGIDLFDFIEFKPRMDEPEAKLIFKQVVAGIKHLHDQGIVHRDIKDENVIV---DSNGFVKLIDFGSAA 718 (772)
T ss_pred CeeEEEecCCCCCcchhhhhhccCccchHHHHHHHHHHHhccccccccCceecccccccEEE---ecCCeEEEeeccchh
Confidence 99999999753 56999999999999999999999999999999999999999999999988 899999999999988
Q ss_pred ccCCCcceecccccccccchhhhhhh--cCCccchHhHHHHHHHHhhCCCCCCC
Q 042823 176 LFEEGQVYRDIVGSGFYIAPEVLRRR--YGKEIDIWSAGVILYILLSGVPPFWA 227 (477)
Q Consensus 176 ~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~DiwslG~il~~l~tg~~pf~~ 227 (477)
....+ .+..++||..|.|||++.|. .+..-|||++|+++|.+.....||+.
T Consensus 719 ~~ksg-pfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyyn 771 (772)
T KOG1152|consen 719 YTKSG-PFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYYN 771 (772)
T ss_pred hhcCC-CcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCcC
Confidence 76544 46778999999999999873 47889999999999999999999864
|
|
| >KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-33 Score=291.71 Aligned_cols=255 Identities=24% Similarity=0.361 Sum_probs=209.6
Q ss_pred ccccccccccccccccccCCeEEEEEEEc----c---CCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEE
Q 042823 17 AYEDVMLHYFFGRMLGRGQFGVSYLCTEN----S---TNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEF 89 (477)
Q Consensus 17 ~~~~~~~~Y~~~~~iG~G~~g~V~~~~~~----~---~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~ 89 (477)
.++...+.-.+.+.||+|+||.|++|.-. . ....||||..+..... .+...+..|+.++..+..||||+.+
T Consensus 290 ~~e~~~~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~--~~~~~~~~El~~m~~~g~H~niv~l 367 (609)
T KOG0200|consen 290 KWEIPRENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASS--SEKKDLMSELNVLKELGKHPNIVNL 367 (609)
T ss_pred ceeechhhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCc--HHHHHHHHHHHHHHHhcCCcchhhh
Confidence 44445555567789999999999998632 1 2467999988654432 5678899999999999999999999
Q ss_pred EEEEEeCCeEEEEEeccCCCchHHHHHHcC----------------CCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCC
Q 042823 90 KSTYEDETAVHVVMELCEGGDLFDRIIAKG----------------YNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPE 153 (477)
Q Consensus 90 ~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~----------------~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~ 153 (477)
.+++...+.+++|+|||..|+|.+++...+ .++......+..||+.|++||++.++|||||-..
T Consensus 368 lG~~t~~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~~vHRDLAaR 447 (609)
T KOG0200|consen 368 LGACTQDGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASVPCVHRDLAAR 447 (609)
T ss_pred eeeeccCCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhCCccchhhhhh
Confidence 999999999999999999999999998766 3788899999999999999999999999999999
Q ss_pred ceeeeecCCCCCEEEeecCCccccCCCccee--cccc--cccccchhhhhh-hcCCccchHhHHHHHHHHhh-CCCCCCC
Q 042823 154 NFSFISRDDNALLKVTDFGSALLFEEGQVYR--DIVG--SGFYIAPEVLRR-RYGKEIDIWSAGVILYILLS-GVPPFWA 227 (477)
Q Consensus 154 Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~--~~~g--t~~y~aPE~~~~-~~~~~~DiwslG~il~~l~t-g~~pf~~ 227 (477)
|||+ ..+..+||+|||+|+...+..... ...| ...|||||.+.. .|+.++||||+|+++||++| |..||.+
T Consensus 448 NVLi---~~~~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~ 524 (609)
T KOG0200|consen 448 NVLI---TKNKVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPG 524 (609)
T ss_pred hEEe---cCCCEEEEccccceeccCCCCceEecCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCC
Confidence 9999 777899999999998755444332 2233 234999999975 69999999999999999999 8999987
Q ss_pred CC-hhhHHHHHHcCCccCCCCCCCCCCHHHHHHHHHhcccCccccCCHHHHhc
Q 042823 228 ET-KKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLE 279 (477)
Q Consensus 228 ~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~ 279 (477)
.. ..+.+..+..|.....+ ..+++++.++++.||+.+|++||++.++.+
T Consensus 525 ~~~~~~l~~~l~~G~r~~~P---~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~ 574 (609)
T KOG0200|consen 525 IPPTEELLEFLKEGNRMEQP---EHCSDEIYDLMKSCWNADPEDRPTFSECVE 574 (609)
T ss_pred CCcHHHHHHHHhcCCCCCCC---CCCCHHHHHHHHHHhCCCcccCCCHHHHHH
Confidence 54 55555555555432221 357999999999999999999999999864
|
|
| >KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-35 Score=254.81 Aligned_cols=256 Identities=24% Similarity=0.364 Sum_probs=201.5
Q ss_pred ccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEE-EEeCC
Q 042823 19 EDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKST-YEDET 97 (477)
Q Consensus 19 ~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~-~~~~~ 97 (477)
-.+.+.|.|.+.+|+|.||.+.+|.|+.+++.+|+|.+.+. ......+.+|...-..|..|.||+.-|++ |+..+
T Consensus 20 v~l~d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p----~tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d 95 (378)
T KOG1345|consen 20 VDLEDVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRP----QTTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSD 95 (378)
T ss_pred cchhhhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcc----hhhHHHHHHHhccceeeccchhhhHHHHHHhhcCc
Confidence 46788999999999999999999999999999999988653 24567788999887888889999988764 78888
Q ss_pred eEEEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCcccc
Q 042823 98 AVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLF 177 (477)
Q Consensus 98 ~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~ 177 (477)
.+++++|||+-|+|..-+...| +.|...+.++.|+++|+.|+|++++||||||.+|||+...+ ...|||||||.+...
T Consensus 96 ~YvF~qE~aP~gdL~snv~~~G-igE~~~K~v~~ql~SAi~fMHsknlVHRdlK~eNiLif~~d-f~rvKlcDFG~t~k~ 173 (378)
T KOG1345|consen 96 AYVFVQEFAPRGDLRSNVEAAG-IGEANTKKVFAQLLSAIEFMHSKNLVHRDLKAENILIFDAD-FYRVKLCDFGLTRKV 173 (378)
T ss_pred eEEEeeccCccchhhhhcCccc-ccHHHHHHHHHHHHHHHHHhhccchhhcccccceEEEecCC-ccEEEeeeccccccc
Confidence 9999999999999988776644 78999999999999999999999999999999999986544 458999999988754
Q ss_pred CCCcceecccccccccchhhhh----h--hcCCccchHhHHHHHHHHhhCCCCCCCCChh----hHHHHHHcCCccCCCC
Q 042823 178 EEGQVYRDIVGSGFYIAPEVLR----R--RYGKEIDIWSAGVILYILLSGVPPFWAETKK----GTYDAILQGEIDFDTD 247 (477)
Q Consensus 178 ~~~~~~~~~~gt~~y~aPE~~~----~--~~~~~~DiwslG~il~~l~tg~~pf~~~~~~----~~~~~i~~~~~~~~~~ 247 (477)
... ....--+..|.|||.+. + ...+.+|+|.||+++|.++||.+||...... -.+.+-.++...-.+.
T Consensus 174 g~t--V~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~~~~~w~~rk~~~~P~ 251 (378)
T KOG1345|consen 174 GTT--VKYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPYWEWEQWLKRKNPALPK 251 (378)
T ss_pred Cce--ehhhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccCchHHHHHHHhcccCccCch
Confidence 321 11112345689999864 2 2578899999999999999999999753221 1223333333333344
Q ss_pred CCCCCCHHHHHHHHHhcccCcccc---CCHHHHhcCcc
Q 042823 248 PWPSISSTAKDLVRRMLTKDPKRR---ITAAQVLEHPW 282 (477)
Q Consensus 248 ~~~~~~~~~~~li~~~l~~dp~~R---~s~~~~l~h~~ 282 (477)
.+...|+.+..+.++-|..+|++| .++.......|
T Consensus 252 ~F~~fs~~a~r~Fkk~lt~~~~drcki~~~kk~rk~~w 289 (378)
T KOG1345|consen 252 KFNPFSEKALRLFKKSLTPRFKDRCKIWTAKKMRKCLW 289 (378)
T ss_pred hhcccCHHHHHHHHHhcCCcccccchhHHHHHHHHHHH
Confidence 456789999999999999999999 34444444444
|
|
| >KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-33 Score=263.71 Aligned_cols=261 Identities=20% Similarity=0.311 Sum_probs=193.1
Q ss_pred CCCCcCCCCCccccccccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHh-cc
Q 042823 3 CSVSKNQRDPILGKAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLY-LS 81 (477)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~-l~ 81 (477)
|.+.++-.-|.+.++ .+..+-++.+.||+|.||.||+|.++ |..||||++... +.....+|..|... +.
T Consensus 193 ~tSGSGSGlplLVQR--TiarqI~L~e~IGkGRyGEVwrG~wr--Ge~VAVKiF~sr------dE~SWfrEtEIYqTvmL 262 (513)
T KOG2052|consen 193 ETSGSGSGLPLLVQR--TIARQIVLQEIIGKGRFGEVWRGRWR--GEDVAVKIFSSR------DERSWFRETEIYQTVML 262 (513)
T ss_pred ccCCCCCCchhHhHH--hhhheeEEEEEecCccccceeecccc--CCceEEEEeccc------chhhhhhHHHHHHHHHh
Confidence 444555555555443 56778889999999999999999984 888999998533 23344555555443 23
Q ss_pred CCCCeeEEEEEEEeC----CeEEEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHc--------CCeecc
Q 042823 82 GQPNVVEFKSTYEDE----TAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSM--------GVMHRD 149 (477)
Q Consensus 82 ~hpniv~~~~~~~~~----~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~--------~ivH~d 149 (477)
+|+||+.++++=..+ .+++||.+|-+.|||+|+|.+ ..++...+.+++..+++||++||-. .|.|||
T Consensus 263 RHENILgFIaaD~~~~gs~TQLwLvTdYHe~GSL~DyL~r-~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRD 341 (513)
T KOG2052|consen 263 RHENILGFIAADNKDNGSWTQLWLVTDYHEHGSLYDYLNR-NTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRD 341 (513)
T ss_pred ccchhhhhhhccccCCCceEEEEEeeecccCCcHHHHHhh-ccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccc
Confidence 799999998875322 358999999999999999988 4578888999999999999999952 499999
Q ss_pred CCCCceeeeecCCCCCEEEeecCCccccCCC-----cceecccccccccchhhhhhhcC-------CccchHhHHHHHHH
Q 042823 150 LKPENFSFISRDDNALLKVTDFGSALLFEEG-----QVYRDIVGSGFYIAPEVLRRRYG-------KEIDIWSAGVILYI 217 (477)
Q Consensus 150 lkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~-------~~~DiwslG~il~~ 217 (477)
||..|||+ .+++.+.|+|+|+|...... ...+..+||..|||||++..... ..+||||||.++||
T Consensus 342 lKSKNILV---Kkn~~C~IADLGLAv~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWE 418 (513)
T KOG2052|consen 342 LKSKNILV---KKNGTCCIADLGLAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWE 418 (513)
T ss_pred cccccEEE---ccCCcEEEeeceeeEEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHH
Confidence 99999999 78899999999999765433 12345799999999999964321 35899999999999
Q ss_pred Hhh----------CCCCCCCCChhhHHHHHHcC-----C-ccCCCCCCCCCC--HHHHHHHHHhcccCccccCCHHHH
Q 042823 218 LLS----------GVPPFWAETKKGTYDAILQG-----E-IDFDTDPWPSIS--STAKDLVRRMLTKDPKRRITAAQV 277 (477)
Q Consensus 218 l~t----------g~~pf~~~~~~~~~~~i~~~-----~-~~~~~~~~~~~~--~~~~~li~~~l~~dp~~R~s~~~~ 277 (477)
++. -++||++-.+.+.-..-++. . -+..+..|.+.+ ..+..+++.||..||..|.|+-.+
T Consensus 419 iarRc~~ggi~eey~~Pyyd~Vp~DPs~eeMrkVVCv~~~RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltALri 496 (513)
T KOG2052|consen 419 IARRCESGGIVEEYQLPYYDVVPSDPSFEEMRKVVCVQKLRPNIPNRWKSDPALRVMAKLMKECWYANPAARLTALRI 496 (513)
T ss_pred HHHHhhcCCEehhhcCCcccCCCCCCCHHHHhcceeecccCCCCCcccccCHHHHHHHHHHHHhhcCCchhhhHHHHH
Confidence 884 26888764433222111111 1 122233343322 346688999999999999998655
|
|
| >KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-33 Score=277.54 Aligned_cols=243 Identities=23% Similarity=0.291 Sum_probs=203.2
Q ss_pred ccccccccCCeEEEEEEEccCC----ceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 042823 27 FGRMLGRGQFGVSYLCTENSTN----RPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVV 102 (477)
Q Consensus 27 ~~~~iG~G~~g~V~~~~~~~~~----~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~lv 102 (477)
..++||+|+||+||+|.+-..| -+||+|++..... .....++..|.-++.+| +|||++++++++.... +.||
T Consensus 700 k~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~--~~~s~e~LdeAl~masl-dHpnl~RLLgvc~~s~-~qlv 775 (1177)
T KOG1025|consen 700 KDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTS--PKASIELLDEALRMASL-DHPNLLRLLGVCMLST-LQLV 775 (1177)
T ss_pred hhceeccccceeEEeeeEecCCceecceeEEEEeeccCC--chhhHHHHHHHHHHhcC-CCchHHHHhhhcccch-HHHH
Confidence 3578999999999999986555 4678888765433 23456788899999999 8999999999998665 8899
Q ss_pred EeccCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCCCc
Q 042823 103 MELCEGGDLFDRIIAK-GYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQ 181 (477)
Q Consensus 103 ~e~~~gg~L~~~l~~~-~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~ 181 (477)
++|+++|+|.++++.+ ..+..+....|..||++||.|||.+++|||||-..|||+ .+..++||.|||+|+...+..
T Consensus 776 tq~mP~G~LlDyvr~hr~~igsq~lLnw~~QIAkgM~YLe~qrlVHrdLaaRNVLV---ksP~hvkitdfgla~ll~~d~ 852 (1177)
T KOG1025|consen 776 TQLMPLGCLLDYVREHRDNIGSQDLLNWCYQIAKGMKYLEEQRLVHRDLAARNVLV---KSPNHVKITDFGLAKLLAPDE 852 (1177)
T ss_pred HHhcccchHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhcchhhhhhhhhheee---cCCCeEEEEecchhhccCccc
Confidence 9999999999999874 568888999999999999999999999999999999999 677889999999999876554
Q ss_pred ceecc-cc--cccccchhhhh-hhcCCccchHhHHHHHHHHhh-CCCCCCCCChhhHHHHHHcCCccCCCCCCCCCCHHH
Q 042823 182 VYRDI-VG--SGFYIAPEVLR-RRYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTA 256 (477)
Q Consensus 182 ~~~~~-~g--t~~y~aPE~~~-~~~~~~~DiwslG~il~~l~t-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 256 (477)
..... .| .+.|||=|.+. ..|+.++||||+||++||++| |..|+.+....++...+..++. .+. .|.++-++
T Consensus 853 ~ey~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~eI~dlle~geR-Lsq--PpiCtiDV 929 (1177)
T KOG1025|consen 853 KEYSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEEIPDLLEKGER-LSQ--PPICTIDV 929 (1177)
T ss_pred ccccccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHHhhHHHhcccc-CCC--CCCccHHH
Confidence 32222 12 34588888876 579999999999999999998 9999999888888777776654 332 25789999
Q ss_pred HHHHHHhcccCccccCCHHHHhc
Q 042823 257 KDLVRRMLTKDPKRRITAAQVLE 279 (477)
Q Consensus 257 ~~li~~~l~~dp~~R~s~~~~l~ 279 (477)
.-++.+||..|+..||++.++..
T Consensus 930 y~~mvkCwmid~~~rp~fkel~~ 952 (1177)
T KOG1025|consen 930 YMVMVKCWMIDADSRPTFKELAE 952 (1177)
T ss_pred HHHHHHHhccCcccCccHHHHHH
Confidence 99999999999999999988753
|
|
| >KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-33 Score=260.70 Aligned_cols=242 Identities=25% Similarity=0.365 Sum_probs=183.9
Q ss_pred cccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhc-cCCCCeeEEEEEEEeCC----e
Q 042823 24 HYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYL-SGQPNVVEFKSTYEDET----A 98 (477)
Q Consensus 24 ~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l-~~hpniv~~~~~~~~~~----~ 98 (477)
--++...||+|.||.||+|.. +++.||||++... +...+.+|-.|.... ..|+||++++++-+... .
T Consensus 211 pl~l~eli~~Grfg~V~KaqL--~~~~VAVKifp~~------~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~e 282 (534)
T KOG3653|consen 211 PLQLLELIGRGRFGCVWKAQL--DNRLVAVKIFPEQ------EKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRME 282 (534)
T ss_pred chhhHHHhhcCccceeehhhc--cCceeEEEecCHH------HHHHHHhHHHHHhccCccchhHHHhhchhccCCccccc
Confidence 355678999999999999986 5699999998643 344555555554432 27999999999876554 7
Q ss_pred EEEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH---------cCCeeccCCCCceeeeecCCCCCEEEe
Q 042823 99 VHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHS---------MGVMHRDLKPENFSFISRDDNALLKVT 169 (477)
Q Consensus 99 ~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~---------~~ivH~dlkp~Nil~~~~~~~~~~kl~ 169 (477)
++||++|.+.|+|.++|+.+- ++......++..+..||+|||. ..|+|||||..|||+ ..+.+..|+
T Consensus 283 ywLVt~fh~kGsL~dyL~~nt-isw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLv---K~DlTccIa 358 (534)
T KOG3653|consen 283 YWLVTEFHPKGSLCDYLKANT-ISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLV---KNDLTCCIA 358 (534)
T ss_pred eeEEeeeccCCcHHHHHHhcc-ccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEE---ccCCcEEee
Confidence 999999999999999998765 6888999999999999999996 359999999999999 788899999
Q ss_pred ecCCccccCCCcce---ecccccccccchhhhhhhcC-------CccchHhHHHHHHHHhhCCC------------CCC-
Q 042823 170 DFGSALLFEEGQVY---RDIVGSGFYIAPEVLRRRYG-------KEIDIWSAGVILYILLSGVP------------PFW- 226 (477)
Q Consensus 170 Dfg~a~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~-------~~~DiwslG~il~~l~tg~~------------pf~- 226 (477)
|||+|..+.+.... ...+||..|||||++.+... .+.||||+|.++|||++... ||.
T Consensus 359 DFGLAl~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~ 438 (534)
T KOG3653|consen 359 DFGLALRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEA 438 (534)
T ss_pred ccceeEEecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhH
Confidence 99999888655432 34789999999999987532 25899999999999997432 232
Q ss_pred ----CCChhhHHHHHHcCCc-cCCCCCCCC--CCHHHHHHHHHhcccCccccCCHHHH
Q 042823 227 ----AETKKGTYDAILQGEI-DFDTDPWPS--ISSTAKDLVRRMLTKDPKRRITAAQV 277 (477)
Q Consensus 227 ----~~~~~~~~~~i~~~~~-~~~~~~~~~--~~~~~~~li~~~l~~dp~~R~s~~~~ 277 (477)
..+..++...+.+... +.-+..|.. ....+++.+..||..||+.|.|+.=+
T Consensus 439 evG~hPt~e~mq~~VV~kK~RP~~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~Cv 496 (534)
T KOG3653|consen 439 EVGNHPTLEEMQELVVRKKQRPKIPDAWRKHAGMAVLCETIEECWDHDAEARLTAGCV 496 (534)
T ss_pred HhcCCCCHHHHHHHHHhhccCCCChhhhhcCccHHHHHHHHHHHcCCchhhhhhhHHH
Confidence 1222333333333221 111122221 23568899999999999999998654
|
|
| >cd00180 PKc Catalytic domain of Protein Kinases | Back alignment and domain information |
|---|
Probab=99.98 E-value=6.2e-31 Score=237.88 Aligned_cols=210 Identities=42% Similarity=0.697 Sum_probs=183.6
Q ss_pred ccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEeccCCCc
Q 042823 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVVMELCEGGD 110 (477)
Q Consensus 31 iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~lv~e~~~gg~ 110 (477)
||+|++|.||++.+..+++.+++|++....... ....+.+|++.+..+ .|++|+++++++......++++|++.|++
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~--~~~~~~~e~~~~~~l-~~~~i~~~~~~~~~~~~~~~~~e~~~~~~ 77 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSS--LLEELLREIEILKKL-NHPNIVKLYGVFEDENHLYLVMEYCEGGS 77 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchh--HHHHHHHHHHHHHhc-CCCCeeeEeeeeecCCeEEEEEecCCCCc
Confidence 689999999999998889999999986543211 346788999999999 68999999999999999999999999999
Q ss_pred hHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCC-CCCEEEeecCCccccCCCc-ceeccc
Q 042823 111 LFDRIIAK-GYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDD-NALLKVTDFGSALLFEEGQ-VYRDIV 187 (477)
Q Consensus 111 L~~~l~~~-~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~-~~~~kl~Dfg~a~~~~~~~-~~~~~~ 187 (477)
|.+++... ..++...+..++.+++.+|.+||+.|++|+||+|.||++ +. ...++|+|||.+....... ......
T Consensus 78 l~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~H~dl~~~ni~~---~~~~~~~~l~d~~~~~~~~~~~~~~~~~~ 154 (215)
T cd00180 78 LKDLLKENEGKLSEDEILRILLQILEGLEYLHSNGIIHRDLKPENILL---DSDNGKVKLADFGLSKLLTSDKSLLKTIV 154 (215)
T ss_pred HHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHhhEEE---eCCCCcEEEecCCceEEccCCcchhhccc
Confidence 99998776 468999999999999999999999999999999999999 55 6789999999987664432 123456
Q ss_pred ccccccchhhhhh--hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCCCCHHHHHHHHHhcc
Q 042823 188 GSGFYIAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLT 265 (477)
Q Consensus 188 gt~~y~aPE~~~~--~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~ 265 (477)
+...|++||.+.. .++.++|+||+|+++++| ..+.+++.+|+.
T Consensus 155 ~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l-----------------------------------~~~~~~l~~~l~ 199 (215)
T cd00180 155 GTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL-----------------------------------PELKDLIRKMLQ 199 (215)
T ss_pred CCCCccChhHhcccCCCCchhhhHHHHHHHHHH-----------------------------------HHHHHHHHHHhh
Confidence 7888999999875 678899999999999998 568899999999
Q ss_pred cCccccCCHHHHhcCc
Q 042823 266 KDPKRRITAAQVLEHP 281 (477)
Q Consensus 266 ~dp~~R~s~~~~l~h~ 281 (477)
.+|++||++.++++|+
T Consensus 200 ~~p~~R~~~~~l~~~~ 215 (215)
T cd00180 200 KDPEKRPSAKEILEHL 215 (215)
T ss_pred CCcccCcCHHHHhhCC
Confidence 9999999999999875
|
Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which |
| >smart00221 STYKc Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.1e-30 Score=237.48 Aligned_cols=211 Identities=41% Similarity=0.668 Sum_probs=180.0
Q ss_pred ccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEe
Q 042823 25 YFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVVME 104 (477)
Q Consensus 25 Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~lv~e 104 (477)
|.+.+.||+|++|.||+|.+..+++.+|+|.+...... .....+.+|+..+..+ +|+|++++++++......++++|
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~--~~~~~~~~e~~~~~~~-~~~~i~~~~~~~~~~~~~~~v~e 77 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTE--KQREEFLREIRILKKL-KHPNIVKLYGVFEDPEPLYLVME 77 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccch--HHHHHHHHHHHHHHhC-CCCChhhheeeeecCCceEEEEe
Confidence 67889999999999999999888999999998754322 2456788999999999 79999999999999999999999
Q ss_pred ccCCCchHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCCCc--
Q 042823 105 LCEGGDLFDRIIAKGY-NSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQ-- 181 (477)
Q Consensus 105 ~~~gg~L~~~l~~~~~-~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~-- 181 (477)
++++++|.+++..... +++..+..++.+++.+|.+||+++++|+||+|.||++ +..+.++|+|||.+.......
T Consensus 78 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~di~~~ni~v---~~~~~~~l~d~g~~~~~~~~~~~ 154 (225)
T smart00221 78 YCEGGDLFDYLRKKGGKLSEEEARFYLRQILEALEYLHSLGIVHRDLKPENILL---GMDGLVKLADFGLARFIHRDLAA 154 (225)
T ss_pred ccCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE---cCCCCEEEeeCceeeEecCcccc
Confidence 9999999999988766 8999999999999999999999999999999999999 666899999999888765432
Q ss_pred ceecccccccccchhhhh--hhcCCccchHhHHHHHHHHhhCCCCCCC-CChh-hHHHHHHcCC
Q 042823 182 VYRDIVGSGFYIAPEVLR--RRYGKEIDIWSAGVILYILLSGVPPFWA-ETKK-GTYDAILQGE 241 (477)
Q Consensus 182 ~~~~~~gt~~y~aPE~~~--~~~~~~~DiwslG~il~~l~tg~~pf~~-~~~~-~~~~~i~~~~ 241 (477)
......++..|++||.+. ..++.++|+||||+++++|++|+.||.. .... .+.+.+..+.
T Consensus 155 ~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~ 218 (225)
T smart00221 155 LLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSGEGEFTSLLSDVWSFGV 218 (225)
T ss_pred cccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccccchhHHHHHHHHhcCC
Confidence 334457788999999983 3467799999999999999999999977 3444 4555555543
|
Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. |
| >PLN00181 protein SPA1-RELATED; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.1e-31 Score=289.14 Aligned_cols=197 Identities=19% Similarity=0.221 Sum_probs=146.5
Q ss_pred CCeeEEEEEE-------EeCCeEEEEEeccCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCce
Q 042823 84 PNVVEFKSTY-------EDETAVHVVMELCEGGDLFDRIIAK-GYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENF 155 (477)
Q Consensus 84 pniv~~~~~~-------~~~~~~~lv~e~~~gg~L~~~l~~~-~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Ni 155 (477)
+||++++++| .....++.++|++ +++|.+++... ..+++.++..+++||+.||.|||++||+||||||+||
T Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~gIvHrDlKP~Ni 111 (793)
T PLN00181 33 DYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDNPDRSVDAFECFHVFRQIVEIVNAAHSQGIVVHNVRPSCF 111 (793)
T ss_pred HHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhcccccccHHHHHHHHHHHHHHHHHHHhCCeeeccCCchhE
Confidence 5777777776 2334678889987 56999999763 4589999999999999999999999999999999999
Q ss_pred eeee----------------cCCCCCEEEeecCCccccCCC-----------------cceecccccccccchhhhhh-h
Q 042823 156 SFIS----------------RDDNALLKVTDFGSALLFEEG-----------------QVYRDIVGSGFYIAPEVLRR-R 201 (477)
Q Consensus 156 l~~~----------------~~~~~~~kl~Dfg~a~~~~~~-----------------~~~~~~~gt~~y~aPE~~~~-~ 201 (477)
|+.. .+..+.+|++|||++...... ......+||++|||||++.+ .
T Consensus 112 Ll~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~ 191 (793)
T PLN00181 112 VMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYTSPEEDNGSS 191 (793)
T ss_pred EEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcceEChhhhccCC
Confidence 9932 123456778888877542110 00112468999999999864 6
Q ss_pred cCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCCCCHHHHHHHHHhcccCccccCCHHHHhcCc
Q 042823 202 YGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHP 281 (477)
Q Consensus 202 ~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~ 281 (477)
|+.++|||||||++|||++|.+|+.... .....+..... +. .+....+....++.+||+++|.+||++.++++||
T Consensus 192 ~~~~sDVwSlGviL~ELl~~~~~~~~~~--~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~L~~~P~~Rps~~eil~h~ 266 (793)
T PLN00181 192 SNCASDVYRLGVLLFELFCPVSSREEKS--RTMSSLRHRVL--PP-QILLNWPKEASFCLWLLHPEPSCRPSMSELLQSE 266 (793)
T ss_pred CCchhhhhhHHHHHHHHhhCCCchhhHH--HHHHHHHHhhc--Ch-hhhhcCHHHHHHHHHhCCCChhhCcChHHHhhch
Confidence 8999999999999999999999875321 12222222211 11 1112345678899999999999999999999999
Q ss_pred ccCcC
Q 042823 282 WLRES 286 (477)
Q Consensus 282 ~~~~~ 286 (477)
||...
T Consensus 267 ~~~~~ 271 (793)
T PLN00181 267 FINEP 271 (793)
T ss_pred hhhhh
Confidence 99764
|
|
| >KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.5e-28 Score=223.11 Aligned_cols=249 Identities=17% Similarity=0.181 Sum_probs=196.8
Q ss_pred cccccccccccccCCeEEEEEEEccC-----CceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEE-e
Q 042823 22 MLHYFFGRMLGRGQFGVSYLCTENST-----NRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYE-D 95 (477)
Q Consensus 22 ~~~Y~~~~~iG~G~~g~V~~~~~~~~-----~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~-~ 95 (477)
+.|.++...+-+|.||.||.|.+.+. .+.|-+|.++... +......+..|--.+..+ .|||+..+.++.. +
T Consensus 283 r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~A--S~iQv~~~L~es~lly~~-sH~nll~V~~V~ie~ 359 (563)
T KOG1024|consen 283 RCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHA--SQIQVNLLLQESMLLYGA-SHPNLLSVLGVSIED 359 (563)
T ss_pred hhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcc--cHHHHHHHHHHHHHHhcC-cCCCccceeEEEeec
Confidence 45677778899999999999976543 2345566664332 233455666777777777 6999999998875 4
Q ss_pred CCeEEEEEeccCCCchHHHHHHc--------CCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEE
Q 042823 96 ETAVHVVMELCEGGDLFDRIIAK--------GYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLK 167 (477)
Q Consensus 96 ~~~~~lv~e~~~gg~L~~~l~~~--------~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~k 167 (477)
....+.++.+..-|+|..++... +.++..+...++.|+..|+.|||++|+||.||-..|.++ ++...||
T Consensus 360 ~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~ViHkDiAaRNCvI---dd~LqVk 436 (563)
T KOG1024|consen 360 YATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHGVIHKDIAARNCVI---DDQLQVK 436 (563)
T ss_pred cCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcCcccchhhhhccee---hhheeEE
Confidence 45677888888889999999732 235667788899999999999999999999999999988 7789999
Q ss_pred EeecCCccccCCCccee---cccccccccchhhhhh-hcCCccchHhHHHHHHHHhh-CCCCCCCCChhhHHHHHHcCCc
Q 042823 168 VTDFGSALLFEEGQVYR---DIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQGEI 242 (477)
Q Consensus 168 l~Dfg~a~~~~~~~~~~---~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~t-g~~pf~~~~~~~~~~~i~~~~~ 242 (477)
|+|=.+++.+.+..... .......|||||.+.. .|+.++|+|||||++|||+| |+.|+..-++.++..-++.|..
T Consensus 437 ltDsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeIDPfEm~~ylkdGyR 516 (563)
T KOG1024|consen 437 LTDSALSRDLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDPFEMEHYLKDGYR 516 (563)
T ss_pred eccchhccccCcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCHHHHHHHHhccce
Confidence 99999998776654321 1123456999999864 69999999999999999998 9999988888888777766643
Q ss_pred cCCCCCCCCCCHHHHHHHHHhcccCccccCCHHHHhc
Q 042823 243 DFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLE 279 (477)
Q Consensus 243 ~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~ 279 (477)
--. .-++|+++..++..||+..|++||+++|+..
T Consensus 517 laQ---P~NCPDeLf~vMacCWallpeeRPsf~Qlv~ 550 (563)
T KOG1024|consen 517 LAQ---PFNCPDELFTVMACCWALLPEERPSFSQLVI 550 (563)
T ss_pred ecC---CCCCcHHHHHHHHHHHhcCcccCCCHHHHHH
Confidence 222 2478999999999999999999999999864
|
|
| >smart00750 KIND kinase non-catalytic C-lobe domain | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.5e-28 Score=216.56 Aligned_cols=162 Identities=25% Similarity=0.295 Sum_probs=128.4
Q ss_pred CchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCCCcceeccc
Q 042823 109 GDLFDRIIAK-GYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIV 187 (477)
Q Consensus 109 g~L~~~l~~~-~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~ 187 (477)
|||.+++... ..+++.+++.++.|++.||.|||+++ ||+||++ +.++.+|+ ||++....... ..
T Consensus 1 GsL~~~l~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~------kp~Nil~---~~~~~~~~--fG~~~~~~~~~----~~ 65 (176)
T smart00750 1 VSLADILEVRGRPLNEEEIWAVCLQCLRALRELHRQA------KSGNILL---TWDGLLKL--DGSVAFKTPEQ----SR 65 (176)
T ss_pred CcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhcC------CcccEeE---cCccceee--ccceEeecccc----CC
Confidence 6899999874 45999999999999999999999999 9999998 77788998 99987654422 26
Q ss_pred ccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChh-hHHHHHHcCCccCCCC---CCCCCCH--HHHHHH
Q 042823 188 GSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKK-GTYDAILQGEIDFDTD---PWPSISS--TAKDLV 260 (477)
Q Consensus 188 gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~-~~~~~i~~~~~~~~~~---~~~~~~~--~~~~li 260 (477)
||+.|+|||++.+ .++.++||||+||++|+|+||.+||...... .....+.......... ....++. .++++|
T Consensus 66 g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 145 (176)
T smart00750 66 VDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMPADDPRDRSNLESVSAARSFADFM 145 (176)
T ss_pred CcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhccCCccccccHHHHHhhhhHHHHH
Confidence 8999999999865 6899999999999999999999999765432 2333333322221111 1112333 699999
Q ss_pred HHhcccCccccCCHHHHhcCcccCc
Q 042823 261 RRMLTKDPKRRITAAQVLEHPWLRE 285 (477)
Q Consensus 261 ~~~l~~dp~~R~s~~~~l~h~~~~~ 285 (477)
.+||..+|.+|||+.++++|+|+..
T Consensus 146 ~~cl~~~p~~Rp~~~~ll~~~~~~~ 170 (176)
T smart00750 146 RVCASRLPQRREAANHYLAHCRALF 170 (176)
T ss_pred HHHHhcccccccCHHHHHHHHHHHH
Confidence 9999999999999999999999753
|
It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features |
| >KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.4e-29 Score=259.25 Aligned_cols=264 Identities=29% Similarity=0.488 Sum_probs=201.1
Q ss_pred ccccc-cccccccccCCeEEEEEEEccCCceEEEEEeecC--Cccchh-hHHHHHHHHHHHHhccCCCCeeEEEEEEEeC
Q 042823 21 VMLHY-FFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKK--PKMRLA-ENDMIRREIQIRLYLSGQPNVVEFKSTYEDE 96 (477)
Q Consensus 21 ~~~~Y-~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~--~~~~~~-~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~ 96 (477)
+.+.| ...+++|.|++|.|+.+........++.|..... ...... ....+..|+-+-..+ .|||++.....+.+.
T Consensus 315 ~~~~y~~~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l-~h~~~~e~l~~~~~~ 393 (601)
T KOG0590|consen 315 FSEKYGKPGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSL-SHPNIIETLDIVQEI 393 (601)
T ss_pred cccccCCccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccc-cCCchhhhHHHHhhc
Confidence 34556 4578999999999998887766666777755421 111111 111245566666667 699998877777666
Q ss_pred CeEEEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccc
Q 042823 97 TAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALL 176 (477)
Q Consensus 97 ~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~ 176 (477)
...+-+||||++ +|+..+...+.++..++..++.|++.|++|+|+.||.|||+||+|+++ ...+.+||+|||.+..
T Consensus 394 ~~~~~~mE~~~~-Dlf~~~~~~~~~~~~e~~c~fKqL~~Gv~y~h~~GiahrdlK~enll~---~~~g~lki~Dfg~~~v 469 (601)
T KOG0590|consen 394 DGILQSMEYCPY-DLFSLVMSNGKLTPLEADCFFKQLLRGVKYLHSMGLAHRDLKLENLLV---TENGILKIIDFGAASV 469 (601)
T ss_pred ccchhhhhcccH-HHHHHHhcccccchhhhhHHHHHHHHHHHHHHhcCceeccCccccEEE---ecCCceEEeecCccee
Confidence 666666999999 999999998889999999999999999999999999999999999999 6777999999998876
Q ss_pred cCCC-----cceecccccccccchhhhhh-hcC-CccchHhHHHHHHHHhhCCCCCCCCChhhHH--HHHHcCC---ccC
Q 042823 177 FEEG-----QVYRDIVGSGFYIAPEVLRR-RYG-KEIDIWSAGVILYILLSGVPPFWAETKKGTY--DAILQGE---IDF 244 (477)
Q Consensus 177 ~~~~-----~~~~~~~gt~~y~aPE~~~~-~~~-~~~DiwslG~il~~l~tg~~pf~~~~~~~~~--~~i~~~~---~~~ 244 (477)
+... ......+|+..|+|||++.+ .|. ...||||.|++++.|.+|+.||......+.. ....... ..-
T Consensus 470 f~~~~e~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~~~~~~~~~~~~~~ 549 (601)
T KOG0590|consen 470 FRYPWEKNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFKTNNYSDQRNIFEG 549 (601)
T ss_pred eccCcchhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccchhhhccccccccccC
Confidence 5322 22356789999999999975 464 4689999999999999999999665443321 1111111 111
Q ss_pred CCCCCCCCCHHHHHHHHHhcccCccccCCHHHHhcCcccCcCCCC
Q 042823 245 DTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEA 289 (477)
Q Consensus 245 ~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~~~~ 289 (477)
+...+..++...+.+|.+||+.+|.+|.|+++|++.+||+....+
T Consensus 550 ~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~d~W~~~i~~c 594 (601)
T KOG0590|consen 550 PNRLLSLLPRETRIIIYRMLQLDPTKRITIEQILNDEWIRSIECC 594 (601)
T ss_pred hHHHHHhchhhHHHHHHHHccCChhheecHHHHhhChHhhhcceE
Confidence 122344578899999999999999999999999999999876543
|
|
| >COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Probab=99.95 E-value=3e-26 Score=222.25 Aligned_cols=256 Identities=38% Similarity=0.573 Sum_probs=207.7
Q ss_pred ccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEe
Q 042823 25 YFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVVME 104 (477)
Q Consensus 25 Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~lv~e 104 (477)
|.+.+.||.|+||.||++.+. ..+++|.+.............+.+|+.++..+..|++|+++.+.+......+++++
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~---~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 78 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR---KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVME 78 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec---cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEe
Confidence 788899999999999999986 78899998766544433567788999999999544489999999988888999999
Q ss_pred ccCCCchHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCC-CEEEeecCCccccCCC
Q 042823 105 LCEGGDLFDRIIAKG---YNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNA-LLKVTDFGSALLFEEG 180 (477)
Q Consensus 105 ~~~gg~L~~~l~~~~---~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~-~~kl~Dfg~a~~~~~~ 180 (477)
++.++++.+++.... .+++..+..++.|++.++.|+|+.+++|||+||+||++ +... .++++|||.+......
T Consensus 79 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~~~~hrd~kp~nil~---~~~~~~~~l~dfg~~~~~~~~ 155 (384)
T COG0515 79 YVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSKGIIHRDIKPENILL---DRDGRVVKLIDFGLAKLLPDP 155 (384)
T ss_pred cCCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeee---cCCCCeEEEeccCcceecCCC
Confidence 999999997777665 78999999999999999999999999999999999999 5555 6999999998755433
Q ss_pred c-------ceecccccccccchhhhhh----hcCCccchHhHHHHHHHHhhCCCCCCCCCh----hhHHHHHHcCCcc-C
Q 042823 181 Q-------VYRDIVGSGFYIAPEVLRR----RYGKEIDIWSAGVILYILLSGVPPFWAETK----KGTYDAILQGEID-F 244 (477)
Q Consensus 181 ~-------~~~~~~gt~~y~aPE~~~~----~~~~~~DiwslG~il~~l~tg~~pf~~~~~----~~~~~~i~~~~~~-~ 244 (477)
. ......||+.|+|||.+.+ .++...|+||+|++++++++|..||..... ......+...... .
T Consensus 156 ~~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (384)
T COG0515 156 GSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTPSL 235 (384)
T ss_pred CccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHHHHhcCCccc
Confidence 2 2356789999999999875 678899999999999999999999877653 3444444443332 2
Q ss_pred CCCCCCCC----CHHHHHHHHHhcccCccccCCHHHHhcCcccCcC
Q 042823 245 DTDPWPSI----SSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRES 286 (477)
Q Consensus 245 ~~~~~~~~----~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~ 286 (477)
.....+.. ...+.+++..++..+|..|.+......++|....
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~ 281 (384)
T COG0515 236 ASPLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSHDLLAHL 281 (384)
T ss_pred ccccCccccchhhHHHHHHHHHHHhcCchhcCCHHHHhhchHhhCc
Confidence 22211121 2578999999999999999999999988766544
|
|
| >KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.3e-26 Score=223.65 Aligned_cols=252 Identities=25% Similarity=0.275 Sum_probs=192.2
Q ss_pred cccccccccccCCeEEEEEEEccCC-ceEEEEEeecCCccchhhHHHHHHHHHHHHhcc---CCCCeeEEEEEE-EeCCe
Q 042823 24 HYFFGRMLGRGQFGVSYLCTENSTN-RPYACKSIAKKPKMRLAENDMIRREIQIRLYLS---GQPNVVEFKSTY-EDETA 98 (477)
Q Consensus 24 ~Y~~~~~iG~G~~g~V~~~~~~~~~-~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~---~hpniv~~~~~~-~~~~~ 98 (477)
+|.+.+.||+|+||.||.|.+..++ ..+|+|.......... ..+..|+.++..+. ..+++..+++.+ ..+.+
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~---~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~ 95 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKP---SVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDF 95 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCC---ccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCce
Confidence 8999999999999999999987764 5788887765432211 15667888888875 246899999999 58889
Q ss_pred EEEEEeccCCCchHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecC--CCCCEEEeecCCc
Q 042823 99 VHVVMELCEGGDLFDRIIAK--GYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRD--DNALLKVTDFGSA 174 (477)
Q Consensus 99 ~~lv~e~~~gg~L~~~l~~~--~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~--~~~~~kl~Dfg~a 174 (477)
.|+||+.+ |.+|.++.... +.++..++..++.|++.+|.++|+.|++||||||+|+++.... ....+.|+|||++
T Consensus 96 ~~iVM~l~-G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGla 174 (322)
T KOG1164|consen 96 NFIVMSLL-GPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSKGFIHRDIKPENFVVGQSSRSEVRTLYLLDFGLA 174 (322)
T ss_pred eEEEEecc-CccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhcCcccCCcCHHHeeecCCCCcccceEEEEecCCC
Confidence 99999999 77999987554 5799999999999999999999999999999999999995443 1257999999999
Q ss_pred cccC---CC------c-c-eecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCc
Q 042823 175 LLFE---EG------Q-V-YRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEI 242 (477)
Q Consensus 175 ~~~~---~~------~-~-~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~ 242 (477)
+.+. .. . . ...+.||..|+|+.+..+ ..+.+.|+||++.++.++..|..||...........+.+...
T Consensus 175 r~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~~~~~~~~~~ 254 (322)
T KOG1164|consen 175 RRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTDLKSKFEKDPR 254 (322)
T ss_pred ccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccccchHHHHHHHhh
Confidence 8321 11 0 1 123569999999999876 588999999999999999999999977654333333322221
Q ss_pred cCCCC-CCCCCCHHHHHHHHHhcccCccccCCHHHHhc
Q 042823 243 DFDTD-PWPSISSTAKDLVRRMLTKDPKRRITAAQVLE 279 (477)
Q Consensus 243 ~~~~~-~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~ 279 (477)
..... .....+.++..+...+-..+...+|....+..
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~ 292 (322)
T KOG1164|consen 255 KLLTDRFGDLKPEEFAKILEYIDSLDYEDKPDYEKLAE 292 (322)
T ss_pred hhccccccCCChHHHHHHHHHhhccCCcCCCCHHHHHH
Confidence 11111 12334567778777777788888888877754
|
|
| >PRK09188 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=2e-27 Score=228.47 Aligned_cols=184 Identities=21% Similarity=0.230 Sum_probs=141.5
Q ss_pred CCccccccccccccccccccccccCCeEEEEEEEcc-CCceEEEEEeecCCc--cchhhHHHHHHHHHHHHhccCCCCee
Q 042823 11 DPILGKAYEDVMLHYFFGRMLGRGQFGVSYLCTENS-TNRPYACKSIAKKPK--MRLAENDMIRREIQIRLYLSGQPNVV 87 (477)
Q Consensus 11 ~~~~~~~~~~~~~~Y~~~~~iG~G~~g~V~~~~~~~-~~~~~aiK~~~~~~~--~~~~~~~~~~~e~~~~~~l~~hpniv 87 (477)
-|....+...+.++|.+.+.||+|+||+||+|+++. +++.+|||++..... ........+.+|++++..+ +|||++
T Consensus 6 ~~~~~~~~~~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L-~h~~iv 84 (365)
T PRK09188 6 VPLPGDQIPALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTV-RGIGVV 84 (365)
T ss_pred CCCcccccccccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhc-cCCCCC
Confidence 356677888999999999999999999999999876 678889998753211 1223456689999999999 699988
Q ss_pred E-EEEEEEeCCeEEEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccC-CCCceeeeecCCCCC
Q 042823 88 E-FKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDL-KPENFSFISRDDNAL 165 (477)
Q Consensus 88 ~-~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dl-kp~Nil~~~~~~~~~ 165 (477)
. +++. +..|+|||||+|++|.. +. ... ...++.|++.||.|||++||+|||| ||+|||+ +.++.
T Consensus 85 ~~l~~~----~~~~LVmE~~~G~~L~~-~~---~~~---~~~~~~~i~~aL~~lH~~gIiHrDL~KP~NILv---~~~~~ 150 (365)
T PRK09188 85 PQLLAT----GKDGLVRGWTEGVPLHL-AR---PHG---DPAWFRSAHRALRDLHRAGITHNDLAKPQNWLM---GPDGE 150 (365)
T ss_pred cEEEEc----CCcEEEEEccCCCCHHH-hC---ccc---hHHHHHHHHHHHHHHHHCCCeeCCCCCcceEEE---cCCCC
Confidence 4 5432 45799999999999962 21 111 1467899999999999999999999 9999999 56678
Q ss_pred EEEeecCCccccCCCcc---------eecccccccccchhhhhhh-------cCCccchH
Q 042823 166 LKVTDFGSALLFEEGQV---------YRDIVGSGFYIAPEVLRRR-------YGKEIDIW 209 (477)
Q Consensus 166 ~kl~Dfg~a~~~~~~~~---------~~~~~gt~~y~aPE~~~~~-------~~~~~Diw 209 (477)
+||+|||+|..+..... .....+++.|+|||.+... .+..+|-|
T Consensus 151 ikLiDFGlA~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~~dgW 210 (365)
T PRK09188 151 AAVIDFQLASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALTPRERKILARKSLPSRIW 210 (365)
T ss_pred EEEEECccceecccCcchhhhhhhhhhhhhhccCccCCcccCChhhhccccccccccCcE
Confidence 99999999986643221 1345688889999998532 23457777
|
|
| >KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=4.1e-26 Score=196.97 Aligned_cols=251 Identities=19% Similarity=0.208 Sum_probs=196.0
Q ss_pred ccccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeC
Q 042823 17 AYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDE 96 (477)
Q Consensus 17 ~~~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~ 96 (477)
+...+..+|.++++||+|+||.+|.|.+..+|..||||+-..+... ..+..|..+...|.+-+.|+.+..+..+.
T Consensus 9 ~~~iv~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~h-----pqL~yEskvY~iL~~g~GiP~i~~y~~e~ 83 (341)
T KOG1163|consen 9 EELIVGGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKAKH-----PQLLYESKVYRILQGGVGIPHIRHYGTEK 83 (341)
T ss_pred hhheeccceEEEEeecCCchhheeeeeeccCCceEEEEeecccCCC-----cchhHHHHHHHHhccCCCCchhhhhcccc
Confidence 4455677899999999999999999999999999999986554332 34566888888887888999999999999
Q ss_pred CeEEEEEeccCCCchHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCcc
Q 042823 97 TAVHVVMELCEGGDLFDRIIA-KGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSAL 175 (477)
Q Consensus 97 ~~~~lv~e~~~gg~L~~~l~~-~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~ 175 (477)
.+-.+|||++ |.||.+++.- ...++-.++.-++-|++.-++|+|.++++||||||+|+|+........+.|+|||+|+
T Consensus 84 ~ynvlVMdLL-GPsLEdLfnfC~R~ftmkTvLMLaDQml~RiEyvH~r~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaK 162 (341)
T KOG1163|consen 84 DYNVLVMDLL-GPSLEDLFNFCSRRFTMKTVLMLADQMLSRIEYVHLRNFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAK 162 (341)
T ss_pred ccceeeeecc-CccHHHHHHHHhhhhhHHhHHHHHHHHHHHHHHHHhhccccccCCccceeeccccccceEEEEeccchh
Confidence 9999999999 7799888864 4568999999999999999999999999999999999999776677789999999998
Q ss_pred ccCCCc--------ceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCCh---hhHHHHHHcCCcc
Q 042823 176 LFEEGQ--------VYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETK---KGTYDAILQGEID 243 (477)
Q Consensus 176 ~~~~~~--------~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~---~~~~~~i~~~~~~ 243 (477)
.+.+.. ......||..|.+--...+ .-+...|+=|+|.++.++.-|..||.+... .+-++.|......
T Consensus 163 ky~d~~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~tk~QKyEkI~EkK~s 242 (341)
T KOG1163|consen 163 KYRDIRTRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKAATKKQKYEKISEKKMS 242 (341)
T ss_pred hhccccccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccchhhHHHHHHHHHHhhcC
Confidence 764321 1234679999999776654 357789999999999999999999988643 3445556555443
Q ss_pred CCCC-CCCCCCHHHHHHHHHhcccCccccCC
Q 042823 244 FDTD-PWPSISSTAKDLVRRMLTKDPKRRIT 273 (477)
Q Consensus 244 ~~~~-~~~~~~~~~~~li~~~l~~dp~~R~s 273 (477)
.+.. .-...|.++.-.+..|=..--++-|.
T Consensus 243 ~~ie~LC~G~P~EF~myl~Y~R~L~F~E~Pd 273 (341)
T KOG1163|consen 243 TPIEVLCKGFPAEFAMYLNYCRGLGFEEKPD 273 (341)
T ss_pred CCHHHHhCCCcHHHHHHHHHHhhcCCCCCCc
Confidence 3221 11245667777777775554444444
|
|
| >KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=8.1e-28 Score=234.70 Aligned_cols=241 Identities=26% Similarity=0.465 Sum_probs=203.5
Q ss_pred cccccCCeEEEEEEE---ccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEecc
Q 042823 30 MLGRGQFGVSYLCTE---NSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVVMELC 106 (477)
Q Consensus 30 ~iG~G~~g~V~~~~~---~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~lv~e~~ 106 (477)
.+|+|+||.|++++. ...+..+|.|+..+....... ......|-.++.....||.+|+++..++.+...|+++++.
T Consensus 1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~-~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~ 79 (612)
T KOG0603|consen 1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRD-RTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFL 79 (612)
T ss_pred CCCcCCCcchHHHHHhccccccchhhhhccccccccccc-ccccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhc
Confidence 479999999998653 356788999987654322211 1144456667777767999999999999999999999999
Q ss_pred CCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCCCcceecc
Q 042823 107 EGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDI 186 (477)
Q Consensus 107 ~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~ 186 (477)
.||.|...+.+...+.+...+.+...++-+++++|+.+++|||+|++||++ +..|++++.|||.++..-.....
T Consensus 80 rgg~lft~l~~~~~f~~~~~~~~~aelaLald~lh~l~iiyrd~k~enill---d~~Ghi~~tdfglske~v~~~~~--- 153 (612)
T KOG0603|consen 80 RGGDLFTRLSKEVMFDELDVAFYLAELALALDHLHKLGIAYRDYKLENVLL---LLEGHIKLTDFGLSKEAVKEKIA--- 153 (612)
T ss_pred ccchhhhccccCCchHHHHHHHHHHHHHHHHhhcchhHHHHhcccccceee---cccCccccCCchhhhHhHhhhhc---
Confidence 999999999998889999999999999999999999999999999999999 88999999999999876543322
Q ss_pred cccccccchhhhhhhcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCCCCHHHHHHHHHhccc
Q 042823 187 VGSGFYIAPEVLRRRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTK 266 (477)
Q Consensus 187 ~gt~~y~aPE~~~~~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~ 266 (477)
+||..|||||++. .+..++|.||+|+++++|+||..||.+ +....|.+....++. ..+..+++++..++..
T Consensus 154 cgt~eymApEI~~-gh~~a~D~ws~gvl~felltg~~pf~~----~~~~~Il~~~~~~p~----~l~~~a~~~~~~l~~r 224 (612)
T KOG0603|consen 154 CGTYEYRAPEIIN-GHLSAADWWSFGVLAFELLTGTLPFGG----DTMKRILKAELEMPR----ELSAEARSLFRQLFKR 224 (612)
T ss_pred ccchhhhhhHhhh-ccCCcccchhhhhhHHHHhhCCCCCch----HHHHHHhhhccCCch----hhhHHHHHHHHHHHhh
Confidence 8999999999999 677899999999999999999999976 566677776666553 5678999999999999
Q ss_pred CccccCCH-----HHHhcCcccCcC
Q 042823 267 DPKRRITA-----AQVLEHPWLRES 286 (477)
Q Consensus 267 dp~~R~s~-----~~~l~h~~~~~~ 286 (477)
+|..|.-. .++++|+||...
T Consensus 225 ~p~nrLg~~~~~~~eik~h~f~~~i 249 (612)
T KOG0603|consen 225 NPENRLGAGPDGVDEIKQHEFFQSI 249 (612)
T ss_pred CHHHHhccCcchhHHHhccchheee
Confidence 99999854 789999999754
|
|
| >KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.2e-24 Score=196.35 Aligned_cols=212 Identities=23% Similarity=0.360 Sum_probs=176.2
Q ss_pred cccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeE
Q 042823 20 DVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAV 99 (477)
Q Consensus 20 ~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~ 99 (477)
.+--.|+++++||+|+||+++.|.+.-+++.||||.-..+ .....+..|.+..+.|.+.++|...|.+.....+-
T Consensus 25 ~VG~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrk-----S~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~N 99 (449)
T KOG1165|consen 25 MVGPHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRK-----SEAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYN 99 (449)
T ss_pred EecccceeccccccCcceeeecccccccCceEEEEecccc-----CCcchHHHHHHHHHHHcCCCCCCceeeeccccchh
Confidence 3445799999999999999999999999999999976443 23457888999888898999999999999999999
Q ss_pred EEEEeccCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecC--CCCCEEEeecCCccc
Q 042823 100 HVVMELCEGGDLFDRIIAK-GYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRD--DNALLKVTDFGSALL 176 (477)
Q Consensus 100 ~lv~e~~~gg~L~~~l~~~-~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~--~~~~~kl~Dfg~a~~ 176 (477)
.||||++ |-||.|++.-. .+++..+++.++.|++.-++|+|++.+|.|||||+|+|+.... ....|.|+|||+|+.
T Consensus 100 iLVidLL-GPSLEDLFD~CgR~FSvKTV~miA~Qmi~rie~vH~k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~ 178 (449)
T KOG1165|consen 100 ILVIDLL-GPSLEDLFDLCGRRFSVKTVAMIAKQMITRIEYVHEKDLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKE 178 (449)
T ss_pred hhhhhhh-CcCHHHHHHHhcCcccHHhHHHHHHHHHHHHHHHHhcceeecccCccceeecCCCCCCCceEEEEeccchhh
Confidence 9999999 77999988754 4699999999999999999999999999999999999995432 234699999999988
Q ss_pred cCCCcc--------eecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCC---hhhHHHHH
Q 042823 177 FEEGQV--------YRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAET---KKGTYDAI 237 (477)
Q Consensus 177 ~~~~~~--------~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~---~~~~~~~i 237 (477)
+.++.. ..+..||..||+--...+ .-+.+.|+=|||-++.+.|-|..||.+.. ..+-+++|
T Consensus 179 YrDp~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA~tnK~kYeKI 251 (449)
T KOG1165|consen 179 YRDPKTKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKADTNKEKYEKI 251 (449)
T ss_pred hcCccccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccccccCcchHHHHHHh
Confidence 754322 234579999999776554 46788999999999999999999998754 34444444
|
|
| >KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.4e-25 Score=205.11 Aligned_cols=191 Identities=26% Similarity=0.422 Sum_probs=144.2
Q ss_pred ccCCCCeeEEEEEEEe---------------------------CCeEEEEEeccCCCchHHHHHHcCCCCHHHHHHHHHH
Q 042823 80 LSGQPNVVEFKSTYED---------------------------ETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRA 132 (477)
Q Consensus 80 l~~hpniv~~~~~~~~---------------------------~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~q 132 (477)
|..|||||++..+|.+ +..+|+||...+. +|..++..+. .+....+-++.|
T Consensus 272 La~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~~-tLr~yl~~~~-~s~r~~~~~laQ 349 (598)
T KOG4158|consen 272 LAKHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYRQ-TLREYLWTRH-RSYRTGRVILAQ 349 (598)
T ss_pred cCCCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcchh-hHHHHHhcCC-CchHHHHHHHHH
Confidence 3479999999887743 3568999998865 9999998765 467778889999
Q ss_pred HHHHHHHHHHcCCeeccCCCCceeeeecCCC-CCEEEeecCCccccCCC-------cceecccccccccchhhhhhhc--
Q 042823 133 IVNAVNVCHSMGVMHRDLKPENFSFISRDDN-ALLKVTDFGSALLFEEG-------QVYRDIVGSGFYIAPEVLRRRY-- 202 (477)
Q Consensus 133 il~~L~~lH~~~ivH~dlkp~Nil~~~~~~~-~~~kl~Dfg~a~~~~~~-------~~~~~~~gt~~y~aPE~~~~~~-- 202 (477)
+++|+.|||++||.|||+|.+|||+-.+++. ..+.++|||++---... ......-|+..-||||+.....
T Consensus 350 lLEav~hL~~hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta~PGp 429 (598)
T KOG4158|consen 350 LLEAVTHLHKHGVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATAVPGP 429 (598)
T ss_pred HHHHHHHHHHccchhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhhhhcCCCC
Confidence 9999999999999999999999999665443 56899999987432221 1112345788899999986322
Q ss_pred -----CCccchHhHHHHHHHHhhCCCCCCCCChhhHH-HHHHcCCccCCCCCCCCCCHHHHHHHHHhcccCccccCCHH
Q 042823 203 -----GKEIDIWSAGVILYILLSGVPPFWAETKKGTY-DAILQGEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAA 275 (477)
Q Consensus 203 -----~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~-~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~ 275 (477)
-.++|.|+.|.+.||+++...||++......- ....+. ..+. ....+++.+++++..+|+.||++|++..
T Consensus 430 ~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~r~Yqe~--qLPa-lp~~vpp~~rqlV~~lL~r~pskRvsp~ 505 (598)
T KOG4158|consen 430 NAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLDTRTYQES--QLPA-LPSRVPPVARQLVFDLLKRDPSKRVSPN 505 (598)
T ss_pred ceeeccchhhhhhhhhhHHHHhccCCcccccchheechhhhhhh--hCCC-CcccCChHHHHHHHHHhcCCccccCCcc
Confidence 24899999999999999999999884322111 111111 1111 2246889999999999999999999864
|
|
| >PRK10359 lipopolysaccharide core biosynthesis protein; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=6e-25 Score=196.55 Aligned_cols=175 Identities=19% Similarity=0.128 Sum_probs=133.5
Q ss_pred cccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHH------HHHHHHHHHhccCCCCeeEEEEEE
Q 042823 20 DVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDM------IRREIQIRLYLSGQPNVVEFKSTY 93 (477)
Q Consensus 20 ~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~------~~~e~~~~~~l~~hpniv~~~~~~ 93 (477)
-+..+|++.++||.|+||.||++.. ++..+|+|++............. +++|++.+.++ .||+|..+.+++
T Consensus 28 ~l~~~y~~~~~l~~~~f~~v~l~~~--~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL-~~~GI~~~~d~~ 104 (232)
T PRK10359 28 FLSYNIKTIKVFRNIDDTKVSLIDT--DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRV-RSEGLASLNDFY 104 (232)
T ss_pred HhhCceEEEEEecCCCceEEEEEec--CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHH-HHCCCCcceEee
Confidence 4678899999999999999999755 47789999987554333322222 67899999999 799999999987
Q ss_pred EeC--------CeEEEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCC
Q 042823 94 EDE--------TAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNAL 165 (477)
Q Consensus 94 ~~~--------~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~ 165 (477)
... +..+|||||++|.+|.+.. .+++ ....+++.+|..||+.|++|||+||+||++ ++++
T Consensus 105 ~~~~~~~~~~~~~~~lvmEyi~G~tL~~~~----~~~~----~~~~~i~~~l~~lH~~gi~H~Dikp~Nili---~~~g- 172 (232)
T PRK10359 105 LLAERKTLRYAHTYIMLIEYIEGVELNDMP----EISE----DVKAKIKASIESLHQHGMVSGDPHKGNFIV---SKNG- 172 (232)
T ss_pred eecccccccccCCeEEEEEEECCccHHHhh----hccH----HHHHHHHHHHHHHHHcCCccCCCChHHEEE---eCCC-
Confidence 643 3589999999999997763 2333 246699999999999999999999999988 4556
Q ss_pred EEEeecCCccccCCCcceecccccccccchhhhhhhcCCccchHhHHHHHHHHh
Q 042823 166 LKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLRRRYGKEIDIWSAGVILYILL 219 (477)
Q Consensus 166 ~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~l~ 219 (477)
++|+|||.+........... =++...|+.++|+||||+++..+.
T Consensus 173 i~liDfg~~~~~~e~~a~d~----------~vler~y~~~~di~~lg~~~~~~~ 216 (232)
T PRK10359 173 LRIIDLSGKRCTAQRKAKDR----------IDLERHYGIKNEIKDLGYYLLIYK 216 (232)
T ss_pred EEEEECCCcccccchhhHHH----------HHHHhHhcccccccceeEeehHHH
Confidence 99999998765532211100 123456778999999999886544
|
|
| >PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.8e-24 Score=199.28 Aligned_cols=234 Identities=22% Similarity=0.347 Sum_probs=150.4
Q ss_pred cccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccC---------CCCeeEEEEEEE
Q 042823 24 HYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSG---------QPNVVEFKSTYE 94 (477)
Q Consensus 24 ~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~---------hpniv~~~~~~~ 94 (477)
....++.||.|+++.||.+++..|++.+|+|+............+.+++|......+.+ |-.++..++...
T Consensus 13 ~l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~ 92 (288)
T PF14531_consen 13 TLVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLR 92 (288)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEE
T ss_pred EEEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEE
Confidence 34567899999999999999999999999999876554344455666666543333221 222333333321
Q ss_pred ---------eC---C-----eEEEEEeccCCCchHHHHH---HcCCC----CHHHHHHHHHHHHHHHHHHHHcCCeeccC
Q 042823 95 ---------DE---T-----AVHVVMELCEGGDLFDRII---AKGYN----SERDAATVLRAIVNAVNVCHSMGVMHRDL 150 (477)
Q Consensus 95 ---------~~---~-----~~~lv~e~~~gg~L~~~l~---~~~~~----~~~~~~~i~~qil~~L~~lH~~~ivH~dl 150 (477)
.. . ..+++|.-+.+ +|.+.+. ..... .......+..|++..+++||+.|+||+||
T Consensus 93 i~~~~~~~~~~~~~~~~~v~n~~~l~P~~~~-dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~GlVHgdi 171 (288)
T PF14531_consen 93 IPGKPPFFERGPGQSIYWVLNRFLLMPRAQG-DLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSYGLVHGDI 171 (288)
T ss_dssp ETTS-SEEEECETTEEEEEESEEEEEE--SE-EHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEEEST-
T ss_pred EcCCCcceecCCCCccceeehhhhccchhhh-cHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhcceEeccc
Confidence 11 1 24678888754 8877754 22222 12222356689999999999999999999
Q ss_pred CCCceeeeecCCCCCEEEeecCCccccCCCcceecccccccccchhhhhh---------hcCCccchHhHHHHHHHHhhC
Q 042823 151 KPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLRR---------RYGKEIDIWSAGVILYILLSG 221 (477)
Q Consensus 151 kp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~---------~~~~~~DiwslG~il~~l~tg 221 (477)
+|+|+++ +.+|.++|+||+......... .....+..|.|||.... .++.+.|.|+||+++|.|++|
T Consensus 172 ~~~nfll---~~~G~v~Lg~F~~~~r~g~~~--~~~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lWC~ 246 (288)
T PF14531_consen 172 KPENFLL---DQDGGVFLGDFSSLVRAGTRY--RCSEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLWCG 246 (288)
T ss_dssp SGGGEEE----TTS-EEE--GGGEEETTEEE--EGGGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHHHS
T ss_pred ceeeEEE---cCCCCEEEcChHHHeecCcee--eccCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHHHc
Confidence 9999999 888999999998776543322 22345677999998643 378899999999999999999
Q ss_pred CCCCCCCChhhHHHHHHcCCccCCCCCCCCCCHHHHHHHHHhcccCcccc
Q 042823 222 VPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKDPKRR 271 (477)
Q Consensus 222 ~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R 271 (477)
..||........... .|..- ..+|+.++.||..+|+.||.+|
T Consensus 247 ~lPf~~~~~~~~~~~------~f~~C--~~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 247 RLPFGLSSPEADPEW------DFSRC--RDMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp S-STCCCGGGSTSGG------GGTTS--S---HHHHHHHHHHT-SSGGGS
T ss_pred cCCCCCCCccccccc------cchhc--CCcCHHHHHHHHHHccCCcccC
Confidence 999975533221111 22211 2678999999999999999998
|
|
| >cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.8e-24 Score=190.40 Aligned_cols=143 Identities=13% Similarity=0.119 Sum_probs=110.2
Q ss_pred cccccccCCeEEEEEEEccCCceEEEEEeecCCccchh-----------------------hHHHHHHHHHHHHhccCCC
Q 042823 28 GRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLA-----------------------ENDMIRREIQIRLYLSGQP 84 (477)
Q Consensus 28 ~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~-----------------------~~~~~~~e~~~~~~l~~hp 84 (477)
...||+|+||.||+|.+. +|+.||+|++......... ......+|++++..+ .++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~-~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~~~ 79 (190)
T cd05147 2 NGCISTGKEANVYHATTA-NGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRL-VTA 79 (190)
T ss_pred CCccccccceEEEEEECC-CCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHH-HHC
Confidence 468999999999999986 8999999998754211000 012334588998888 466
Q ss_pred CeeEEEEEEEeCCeEEEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHH-HHcCCeeccCCCCceeeeecCCC
Q 042823 85 NVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVC-HSMGVMHRDLKPENFSFISRDDN 163 (477)
Q Consensus 85 niv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~l-H~~~ivH~dlkp~Nil~~~~~~~ 163 (477)
++.....+.... .+|||||++|+++.......+.+++..+..++.|++.+|.++ |+.||+||||||+||++ + .
T Consensus 80 ~v~~p~~~~~~~--~~iVmE~i~g~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~l~H~~giiHrDlkP~NIli---~-~ 153 (190)
T cd05147 80 GIPCPEPILLKS--HVLVMEFIGDDGWAAPRLKDAPLSESKARELYLQVIQIMRILYQDCRLVHADLSEYNLLY---H-D 153 (190)
T ss_pred CCCCCcEEEecC--CEEEEEEeCCCCCcchhhhcCCCCHHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEE---E-C
Confidence 664433332222 389999999987766555567789999999999999999999 79999999999999999 3 3
Q ss_pred CCEEEeecCCccccC
Q 042823 164 ALLKVTDFGSALLFE 178 (477)
Q Consensus 164 ~~~kl~Dfg~a~~~~ 178 (477)
+.++|+|||+|....
T Consensus 154 ~~v~LiDFG~a~~~~ 168 (190)
T cd05147 154 GKLYIIDVSQSVEHD 168 (190)
T ss_pred CcEEEEEccccccCC
Confidence 679999999997653
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c |
| >KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.91 E-value=3.5e-25 Score=226.79 Aligned_cols=245 Identities=24% Similarity=0.348 Sum_probs=182.6
Q ss_pred cccccccccccCCeEEEEEEEccCCceEEEEEeecCC-ccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 042823 24 HYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKP-KMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVV 102 (477)
Q Consensus 24 ~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~lv 102 (477)
.|...+.||++.|=.|.+|++.. |. |++|++.+.. .....+..+-..|++ ..+.+|||++.+.-+-+.+...|||
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~e-G~-vVvKVFvk~~p~~sL~~~~qrL~~ik--~~l~~~pn~lPfqk~~~t~kAAylv 99 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDRE-GL-VVVKVFVKQDPTISLRPFKQRLEEIK--FALMKAPNCLPFQKVLVTDKAAYLV 99 (1431)
T ss_pred ceeeecccCchhhhhhhhccCCC-ce-EEEEEEeccCCCCCchHHHHHHHHHH--HHhhcCCcccchHHHHHhhHHHHHH
Confidence 68889999999999999999753 44 9999987654 333344444445555 3445899999999888888999999
Q ss_pred EeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccc--c-CC
Q 042823 103 MELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALL--F-EE 179 (477)
Q Consensus 103 ~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~--~-~~ 179 (477)
-+|... +|+|++..+..+..-+-+.|+.|++.||..||..||+|||||.+|||+.+ -.-+.|+||..-+. + .+
T Consensus 100 Rqyvkh-nLyDRlSTRPFL~~iEKkWiaFQLL~al~qcH~~gVcHGDIKsENILiTS---WNW~~LtDFAsFKPtYLPeD 175 (1431)
T KOG1240|consen 100 RQYVKH-NLYDRLSTRPFLVLIEKKWIAFQLLKALSQCHKLGVCHGDIKSENILITS---WNWLYLTDFASFKPTYLPED 175 (1431)
T ss_pred HHHHhh-hhhhhhccchHHHHHHHHHHHHHHHHHHHHHHHcCccccccccceEEEee---echhhhhcccccCCccCCCC
Confidence 999976 99999999999999999999999999999999999999999999999944 44588999974432 1 11
Q ss_pred Ccc-e----ecccccccccchhhhhh-----------h-cCCccchHhHHHHHHHHhh-CCCCCCCCChhhHHHHHHcCC
Q 042823 180 GQV-Y----RDIVGSGFYIAPEVLRR-----------R-YGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQGE 241 (477)
Q Consensus 180 ~~~-~----~~~~gt~~y~aPE~~~~-----------~-~~~~~DiwslG~il~~l~t-g~~pf~~~~~~~~~~~i~~~~ 241 (477)
++. + .+...-.+|.|||.+.. . .+++-||||+||+++||++ |.|||. -.++-+..++.
T Consensus 176 NPadf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~----LSQL~aYr~~~ 251 (1431)
T KOG1240|consen 176 NPADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFT----LSQLLAYRSGN 251 (1431)
T ss_pred CcccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCccc----HHHHHhHhccC
Confidence 111 1 11122346999998742 1 4678899999999999998 789983 22223333332
Q ss_pred ccCCCCCCC-CCCHHHHHHHHHhcccCccccCCHHHHhcC
Q 042823 242 IDFDTDPWP-SISSTAKDLVRRMLTKDPKRRITAAQVLEH 280 (477)
Q Consensus 242 ~~~~~~~~~-~~~~~~~~li~~~l~~dp~~R~s~~~~l~h 280 (477)
...+..... --+..++++|..|++.||++|.+|++.|+.
T Consensus 252 ~~~~e~~Le~Ied~~~Rnlil~Mi~rdPs~RlSAedyL~~ 291 (1431)
T KOG1240|consen 252 ADDPEQLLEKIEDVSLRNLILSMIQRDPSKRLSAEDYLQK 291 (1431)
T ss_pred ccCHHHHHHhCcCccHHHHHHHHHccCchhccCHHHHHHh
Confidence 111000000 113468999999999999999999999985
|
|
| >KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only] | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.1e-24 Score=220.93 Aligned_cols=225 Identities=30% Similarity=0.532 Sum_probs=178.0
Q ss_pred ccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCe
Q 042823 19 EDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETA 98 (477)
Q Consensus 19 ~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~ 98 (477)
.....+|..++.|-.|+||-||.++|+.+.+.+|+| +.++... +++ ++.. .+.|.+|
T Consensus 79 ~p~e~df~~IklisngAygavylvrh~~trqrfa~k-iNkq~li-------lRn---ilt~-a~npfvv----------- 135 (1205)
T KOG0606|consen 79 APSESDFNTIKLISNGAYGAVYLVRHKETRQRFAMK-INKQNLI-------LRN---ILTF-AGNPFVV----------- 135 (1205)
T ss_pred CCCccccceeEeeccCCCCceeeeeccccccchhhc-ccccchh-------hhc---cccc-cCCccee-----------
Confidence 345567889999999999999999999999999995 4333211 111 2222 2566655
Q ss_pred EEEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccC
Q 042823 99 VHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFE 178 (477)
Q Consensus 99 ~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~ 178 (477)
|+=...++.-+.++... +.+++|||+-||+|||+||+|.++ ..-+++|++|||+++..-
T Consensus 136 ----------gDc~tllk~~g~lPvdm--------vla~Eylh~ygivhrdlkpdnllI---T~mGhiKlTDfgLsk~GL 194 (1205)
T KOG0606|consen 136 ----------GDCATLLKNIGPLPVDM--------VLAVEYLHSYGIVHRDLKPDNLLI---TSMGHIKLTDFGLSKKGL 194 (1205)
T ss_pred ----------chhhhhcccCCCCcchh--------hHHhHhhccCCeecCCCCCCccee---eecccccccchhhhhhhh
Confidence 34445555556666544 778999999999999999999998 678899999999876421
Q ss_pred CC--------------cc--eecccccccccchhhhh-hhcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCC
Q 042823 179 EG--------------QV--YRDIVGSGFYIAPEVLR-RRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGE 241 (477)
Q Consensus 179 ~~--------------~~--~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~ 241 (477)
.. .. ....+|||.|.|||++. ..|+..+|.|++|+|+|+.+-|..||.+.+.++.+..+....
T Consensus 195 ms~atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtpeelfg~visd~ 274 (1205)
T KOG0606|consen 195 MSLATNLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDD 274 (1205)
T ss_pred hhccchhhhcchHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCHHHHHhhhhhhh
Confidence 10 00 12348999999999975 679999999999999999999999999999999999999888
Q ss_pred ccCCCCCCCCCCHHHHHHHHHhcccCccccC---CHHHHhcCcccCcCCC
Q 042823 242 IDFDTDPWPSISSTAKDLVRRMLTKDPKRRI---TAAQVLEHPWLRESGE 288 (477)
Q Consensus 242 ~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~---s~~~~l~h~~~~~~~~ 288 (477)
..++... ..++++++++|.++|+.+|..|. .+.++.+|+||+....
T Consensus 275 i~wpE~d-ea~p~Ea~dli~~LL~qnp~~Rlgt~ga~evk~h~ff~~LDw 323 (1205)
T KOG0606|consen 275 IEWPEED-EALPPEAQDLIEQLLRQNPLCRLGTGGALEVKQHGFFQLLDW 323 (1205)
T ss_pred ccccccC-cCCCHHHHHHHHHHHHhChHhhcccchhhhhhhccceeeccc
Confidence 8887764 46789999999999999999996 5778889999986543
|
|
| >cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain | Back alignment and domain information |
|---|
Probab=99.90 E-value=3.4e-23 Score=184.26 Aligned_cols=145 Identities=14% Similarity=0.098 Sum_probs=113.3
Q ss_pred ccccccccCCeEEEEEEEccCCceEEEEEeecCCccc---------------------h--hhHHHHHHHHHHHHhccCC
Q 042823 27 FGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMR---------------------L--AENDMIRREIQIRLYLSGQ 83 (477)
Q Consensus 27 ~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~---------------------~--~~~~~~~~e~~~~~~l~~h 83 (477)
+.++||+|++|.||+|.+. +|+.||+|++....... . .......+|...+.++ .|
T Consensus 1 ~~~~ig~G~~~~Vy~a~~~-~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~~ 78 (190)
T cd05145 1 INGCISTGKEANVYHARTG-DGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRL-YE 78 (190)
T ss_pred CCceeecCCCcEEEEEEcC-CCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHH-Hh
Confidence 3578999999999999987 89999999987642110 0 0022346788888888 58
Q ss_pred CCeeEEEEEEEeCCeEEEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH-cCCeeccCCCCceeeeecCC
Q 042823 84 PNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHS-MGVMHRDLKPENFSFISRDD 162 (477)
Q Consensus 84 pniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~-~~ivH~dlkp~Nil~~~~~~ 162 (477)
+++.....+.... .|+||||++|+++.........+++..+..++.|++.+|.++|+ .||+||||||+||++ +
T Consensus 79 ~~i~~p~~~~~~~--~~lVmE~~~g~~~~~~~l~~~~~~~~~~~~i~~~l~~~l~~lH~~~givHrDlkP~NIll---~- 152 (190)
T cd05145 79 AGVPVPEPILLKK--NVLVMEFIGDDGSPAPRLKDVPLEEEEAEELYEQVVEQMRRLYQEAGLVHGDLSEYNILY---H- 152 (190)
T ss_pred CCCCCceEEEecC--CEEEEEEecCCCchhhhhhhccCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCChhhEEE---E-
Confidence 8875554444332 47999999988665544455678889999999999999999999 999999999999999 3
Q ss_pred CCCEEEeecCCccccCC
Q 042823 163 NALLKVTDFGSALLFEE 179 (477)
Q Consensus 163 ~~~~kl~Dfg~a~~~~~ 179 (477)
.+.++|+|||++.....
T Consensus 153 ~~~~~liDFG~a~~~~~ 169 (190)
T cd05145 153 DGKPYIIDVSQAVELDH 169 (190)
T ss_pred CCCEEEEEcccceecCC
Confidence 57899999999987644
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro |
| >PRK12274 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=5.1e-23 Score=180.04 Aligned_cols=189 Identities=19% Similarity=0.218 Sum_probs=141.7
Q ss_pred cccccccccCCeEEEEEEEccCCceEEEEEeecCCccc-hhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEe
Q 042823 26 FFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMR-LAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVVME 104 (477)
Q Consensus 26 ~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~lv~e 104 (477)
.+...|++|+||+|+.+.. .+.+++.+.+...+-.. ......+.+|++++.+|.+|++|++++++ ...|++||
T Consensus 5 ~~~~~l~~~~f~~v~~~~~--~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvme 78 (218)
T PRK12274 5 AVNEPLKSDTFGRILLVRG--GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDRS 78 (218)
T ss_pred ccceeecCCCcceEEEeec--CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEe
Confidence 3567899999999998764 57777777665433211 11123578999999999777999999886 34699999
Q ss_pred ccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccC-CCCceeeeecCCCCCEEEeecCCccccCCCcce
Q 042823 105 LCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDL-KPENFSFISRDDNALLKVTDFGSALLFEEGQVY 183 (477)
Q Consensus 105 ~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dl-kp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~ 183 (477)
|+.|.+|.+.+.. . ...++.|++.+|.++|++||+|||| ||+||++ +.++.++|+|||+|....+....
T Consensus 79 yI~G~~L~~~~~~------~-~~~~~~qi~~~L~~lH~~GIvHrDL~kp~NILv---~~~g~i~LIDFG~A~~~~~~~~~ 148 (218)
T PRK12274 79 YLAGAAMYQRPPR------G-DLAYFRAARRLLQQLHRCGVAHNDLAKEANWLV---QEDGSPAVIDFQLAVRGNPRARW 148 (218)
T ss_pred eecCccHHhhhhh------h-hHHHHHHHHHHHHHHHHCcCccCCCCCcceEEE---cCCCCEEEEECCCceecCCcchH
Confidence 9999988654321 1 2357889999999999999999999 7999999 66778999999999865543310
Q ss_pred ------e--------cccccccccchhhhh--hhcC-CccchHhHHHHHHHHhhCCCCCCCCCh
Q 042823 184 ------R--------DIVGSGFYIAPEVLR--RRYG-KEIDIWSAGVILYILLSGVPPFWAETK 230 (477)
Q Consensus 184 ------~--------~~~gt~~y~aPE~~~--~~~~-~~~DiwslG~il~~l~tg~~pf~~~~~ 230 (477)
. -...++.|++|+.-. ...+ ...+.++.|+-+|.++|+..|+++...
T Consensus 149 ~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~~~~ 212 (218)
T PRK12274 149 MRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWEDNE 212 (218)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCccccCC
Confidence 0 013578888888643 2233 467888999999999999999877643
|
|
| >PRK10345 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=5.1e-22 Score=177.39 Aligned_cols=139 Identities=18% Similarity=0.186 Sum_probs=109.3
Q ss_pred ccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhcc----CCCCeeEEEEEEEeCC---eE
Q 042823 27 FGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLS----GQPNVVEFKSTYEDET---AV 99 (477)
Q Consensus 27 ~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~----~hpniv~~~~~~~~~~---~~ 99 (477)
-.+.||+|+||.||. |..++.. +||++..... .....+.+|+.+++.+. +||||++++++++++. .+
T Consensus 6 ~~~~LG~G~~~~Vy~--hp~~~~k-~IKv~~~~~~---~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v 79 (210)
T PRK10345 6 EQSPLGTGRHRKCYA--HPEDAQR-CIKIVYHRGD---GGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYV 79 (210)
T ss_pred CcceecCCCceEEEE--CCCCcCe-EEEEEecccc---chHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEE
Confidence 357899999999995 7777666 6898865432 23467899999999984 4899999999999874 43
Q ss_pred E-EEEec--cCCCchHHHHHHcCCCCHHHHHHHHHHHHHHH-HHHHHcCCeeccCCCCceeeeecC-CCCCEEEeecCCc
Q 042823 100 H-VVMEL--CEGGDLFDRIIAKGYNSERDAATVLRAIVNAV-NVCHSMGVMHRDLKPENFSFISRD-DNALLKVTDFGSA 174 (477)
Q Consensus 100 ~-lv~e~--~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L-~~lH~~~ivH~dlkp~Nil~~~~~-~~~~~kl~Dfg~a 174 (477)
+ +|||| +.+|+|.+++.+. .+++. ..++.|++.++ .|||+++|+||||||+||++...+ ....++|+||+-+
T Consensus 80 ~~~I~e~~G~~~~tL~~~l~~~-~~~e~--~~~~~~~L~~l~~yLh~~~IvhrDlKp~NILl~~~~~~~~~~~LiDg~G~ 156 (210)
T PRK10345 80 YDVIADFDGKPSITLTEFAEQC-RYEED--VAQLRQLLKKLKRYLLDNRIVTMELKPQNILCQRISESEVIPVVCDNIGE 156 (210)
T ss_pred EEEEecCCCCcchhHHHHHHcc-cccHh--HHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEeccCCCCCcEEEEECCCC
Confidence 4 78999 5579999999664 46665 35688888888 999999999999999999995433 3458999995433
|
|
| >COG5126 FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only] | Back alignment and domain information |
|---|
Probab=99.88 E-value=7.9e-22 Score=163.40 Aligned_cols=139 Identities=29% Similarity=0.483 Sum_probs=126.7
Q ss_pred hhccCCchhhHHHHHHhhhcCCCCCCCccHHHHHHHHHhhCCCCCHHHHHHHHHHhhc---cchHHHHHhcCCh-----H
Q 042823 316 IVEYLPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKN---SSTLESLCENLPT-----K 387 (477)
Q Consensus 316 i~~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~---~~~~~~~~~~~~~-----~ 387 (477)
....++.++.++++++|..+|.+++|.|+..+|..+++.+|..+++.++.++++.++. ..+|.+|...++. .
T Consensus 10 ~~~~~t~~qi~~lkeaF~l~D~d~~G~I~~~el~~ilr~lg~~~s~~ei~~l~~~~d~~~~~idf~~Fl~~ms~~~~~~~ 89 (160)
T COG5126 10 TFTQLTEEQIQELKEAFQLFDRDSDGLIDRNELGKILRSLGFNPSEAEINKLFEEIDAGNETVDFPEFLTVMSVKLKRGD 89 (160)
T ss_pred hcccCCHHHHHHHHHHHHHhCcCCCCCCcHHHHHHHHHHcCCCCcHHHHHHHHHhccCCCCccCHHHHHHHHHHHhccCC
Confidence 3466788999999999999999999999999999999999999999999999999994 4567777665533 3
Q ss_pred HHHHHHHHhhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHh
Q 042823 388 EKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTD 454 (477)
Q Consensus 388 ~~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~ 454 (477)
..+++++||+.||.|++|+|+..||+.++..+|..+++++++.+++.+|.++||.|+|++|++.+..
T Consensus 90 ~~Eel~~aF~~fD~d~dG~Is~~eL~~vl~~lge~~~deev~~ll~~~d~d~dG~i~~~eF~~~~~~ 156 (160)
T COG5126 90 KEEELREAFKLFDKDHDGYISIGELRRVLKSLGERLSDEEVEKLLKEYDEDGDGEIDYEEFKKLIKD 156 (160)
T ss_pred cHHHHHHHHHHhCCCCCceecHHHHHHHHHhhcccCCHHHHHHHHHhcCCCCCceEeHHHHHHHHhc
Confidence 4789999999999999999999999999999999999999999999999999999999999998764
|
|
| >KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.86 E-value=4.1e-22 Score=175.20 Aligned_cols=254 Identities=15% Similarity=0.178 Sum_probs=191.6
Q ss_pred CCCccccccccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEE
Q 042823 10 RDPILGKAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEF 89 (477)
Q Consensus 10 ~~~~~~~~~~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~ 89 (477)
|+..+++....-..+..+..+|.+...|..|++++. |..+++|++....- .......+..|.-.++-. .||||+.+
T Consensus 177 rdatlsr~~gid~~~lnl~tkl~e~hsgelwrgrwq--gndivakil~vr~~-t~risrdfneefp~lrif-shpnilpv 252 (448)
T KOG0195|consen 177 RDATLSRYTGIDVSSLNLITKLAESHSGELWRGRWQ--GNDIVAKILNVREV-TARISRDFNEEFPALRIF-SHPNILPV 252 (448)
T ss_pred cccccccccCcchhhhhhhhhhccCCCccccccccc--Ccchhhhhhhhhhc-chhhcchhhhhCcceeee-cCCchhhh
Confidence 455555555555566677889999999999999985 44577787754322 222344566777776666 79999999
Q ss_pred EEEEEeCCeEEEEEeccCCCchHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHHHcC--CeeccCCCCceeeeecCCCCC
Q 042823 90 KSTYEDETAVHVVMELCEGGDLFDRIIAKGY--NSERDAATVLRAIVNAVNVCHSMG--VMHRDLKPENFSFISRDDNAL 165 (477)
Q Consensus 90 ~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~--~~~~~~~~i~~qil~~L~~lH~~~--ivH~dlkp~Nil~~~~~~~~~ 165 (477)
++.+..+..+.+|..|++-|||+..+..... ....++.+++.+++.|+.|||+.. |.---|....+++ +++.+
T Consensus 253 lgacnsppnlv~isq~mp~gslynvlhe~t~vvvd~sqav~faldiargmaflhslep~ipr~~lns~hvmi---dedlt 329 (448)
T KOG0195|consen 253 LGACNSPPNLVIISQYMPFGSLYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSLEPMIPRFYLNSKHVMI---DEDLT 329 (448)
T ss_pred hhhccCCCCceEeeeeccchHHHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhcchhhhhhhcccceEEe---cchhh
Confidence 9999999999999999999999999987653 477889999999999999999975 4444577777777 55444
Q ss_pred --EEEeecCCccccCCCcceecccccccccchhhhhhh----cCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHc
Q 042823 166 --LKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLRRR----YGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQ 239 (477)
Q Consensus 166 --~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~----~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~ 239 (477)
+-.+|-.++... .+..-+|.|||||.++.. .-.++|+|||++++|||.|...||...++.+.-.++.-
T Consensus 330 arismad~kfsfqe------~gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecgmkial 403 (448)
T KOG0195|consen 330 ARISMADTKFSFQE------VGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECGMKIAL 403 (448)
T ss_pred hheecccceeeeec------cccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhhhhhhh
Confidence 334443333221 123457889999999753 24579999999999999999999988887776655543
Q ss_pred CCccCCCCCCCCCCHHHHHHHHHhcccCccccCCHHHHh
Q 042823 240 GEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVL 278 (477)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l 278 (477)
..+.. ...|.+|..+..|+.-|+..||.+||.++.++
T Consensus 404 eglrv--~ippgis~hm~klm~icmnedpgkrpkfdmiv 440 (448)
T KOG0195|consen 404 EGLRV--HIPPGISRHMNKLMNICMNEDPGKRPKFDMIV 440 (448)
T ss_pred ccccc--cCCCCccHHHHHHHHHHhcCCCCcCCCcceeh
Confidence 33322 22368999999999999999999999988764
|
|
| >smart00090 RIO RIO-like kinase | Back alignment and domain information |
|---|
Probab=99.85 E-value=5.1e-21 Score=175.34 Aligned_cols=148 Identities=14% Similarity=0.091 Sum_probs=114.5
Q ss_pred cccccccccccCCeEEEEEE-EccCCceEEEEEeecCCccc-------------------h--hhHHHHHHHHHHHHhcc
Q 042823 24 HYFFGRMLGRGQFGVSYLCT-ENSTNRPYACKSIAKKPKMR-------------------L--AENDMIRREIQIRLYLS 81 (477)
Q Consensus 24 ~Y~~~~~iG~G~~g~V~~~~-~~~~~~~~aiK~~~~~~~~~-------------------~--~~~~~~~~e~~~~~~l~ 81 (477)
-|.+.++||+|++|.||+|. +..+|+.||+|++....... . .....+.+|+.++.++.
T Consensus 29 ~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~ 108 (237)
T smart00090 29 LSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLY 108 (237)
T ss_pred hHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 48899999999999999998 67789999999987542100 0 01134578999999984
Q ss_pred C-CCCeeEEEEEEEeCCeEEEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcC-CeeccCCCCceeeee
Q 042823 82 G-QPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMG-VMHRDLKPENFSFIS 159 (477)
Q Consensus 82 ~-hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~-ivH~dlkp~Nil~~~ 159 (477)
. +..++++++. . ..++||||++|++|.............++..++.|++.+|.+||++| ++||||||+||++
T Consensus 109 ~~~i~~p~~~~~---~-~~~lV~E~~~g~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~g~iiH~Dikp~NIli-- 182 (237)
T smart00090 109 EAGVPVPKPIAW---R-RNVLVMEFIGGDGLPAPRLKDVEPEEEEEFELYDDILEEMRKLYKEGELVHGDLSEYNILV-- 182 (237)
T ss_pred hcCCCCCeeeEe---c-CceEEEEEecCCcccccccccCCcchHHHHHHHHHHHHHHHHHHhcCCEEeCCCChhhEEE--
Confidence 2 2334455442 2 34899999999888766545556677778899999999999999999 9999999999999
Q ss_pred cCCCCCEEEeecCCccccCC
Q 042823 160 RDDNALLKVTDFGSALLFEE 179 (477)
Q Consensus 160 ~~~~~~~kl~Dfg~a~~~~~ 179 (477)
+ .+.++|+|||.+.....
T Consensus 183 -~-~~~i~LiDFg~a~~~~~ 200 (237)
T smart00090 183 -H-DGKVVIIDVSQSVELDH 200 (237)
T ss_pred -E-CCCEEEEEChhhhccCC
Confidence 3 67899999998875443
|
|
| >KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.8e-21 Score=203.34 Aligned_cols=197 Identities=20% Similarity=0.283 Sum_probs=158.8
Q ss_pred cccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhcc--CCCCeeEEEEEEEeCC
Q 042823 20 DVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLS--GQPNVVEFKSTYEDET 97 (477)
Q Consensus 20 ~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~--~hpniv~~~~~~~~~~ 97 (477)
.=...|.|.+.||+|+||.||+|.+.. |+.||+|+-........-... +++.+|. --|.|..+..++...+
T Consensus 695 ~~~~~~~I~~e~G~g~y~~vy~a~~~~-~~~~alK~e~P~~~WEfYI~~------q~~~RLk~~~~~~~~~~~~a~~~~~ 767 (974)
T KOG1166|consen 695 VGGEKFCISKEIGEGSYGSVYVATHSN-GKLVALKVEKPPNPWEFYICL------QVMERLKPQMLPSIMHISSAHVFQN 767 (974)
T ss_pred ecceeEEEEeeeccccceEEEEeecCC-CcEEEEEeecCCCceeeeehH------HHHHhhchhhhcchHHHHHHHccCC
Confidence 334578999999999999999999876 999999976433222211112 2222331 2356777777777788
Q ss_pred eEEEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeec----CCCCCEEEeecCC
Q 042823 98 AVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISR----DDNALLKVTDFGS 173 (477)
Q Consensus 98 ~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~----~~~~~~kl~Dfg~ 173 (477)
.-++|+||.+.|||.+++...+.+++..+..++.|+|..++.||..+||||||||+|+|+... .+..-++|||||.
T Consensus 768 ~S~lv~ey~~~Gtlld~~N~~~~m~e~lv~~~~~qml~ive~lH~~~IIHgDiKPDNfll~~~~~~~~~~~~l~lIDfG~ 847 (974)
T KOG1166|consen 768 ASVLVSEYSPYGTLLDLINTNKVMDEYLVMFFSCQMLRIVEHLHAMGIIHGDIKPDNFLLRREICADSDSKGLYLIDFGR 847 (974)
T ss_pred cceeeeeccccccHHHhhccCCCCCchhhhHHHHHHHHHHHHHHhcceecccCCcceeEeecccCCCCcccceEEEeccc
Confidence 889999999999999999998999999999999999999999999999999999999988332 2345699999998
Q ss_pred cccc---CCCcceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCC
Q 042823 174 ALLF---EEGQVYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVP 223 (477)
Q Consensus 174 a~~~---~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~ 223 (477)
+... .++..+...++|-.+-.+|+..| .++..+|.|.++.+++-||.|+.
T Consensus 848 siDm~lfp~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y 901 (974)
T KOG1166|consen 848 SIDMKLFPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKY 901 (974)
T ss_pred ceeeeEcCCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHH
Confidence 8654 44446677889999999999987 58999999999999999999863
|
|
| >KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.1e-22 Score=208.69 Aligned_cols=261 Identities=28% Similarity=0.479 Sum_probs=211.0
Q ss_pred ccccccccccccccCCeEEEEEEEc-cCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeE
Q 042823 21 VMLHYFFGRMLGRGQFGVSYLCTEN-STNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAV 99 (477)
Q Consensus 21 ~~~~Y~~~~~iG~G~~g~V~~~~~~-~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~ 99 (477)
-...|.+.+.||+|+|+.|-.+... .+...+|.|.+.... ........+..|..+...+..|+|++.+++...+....
T Consensus 18 ~~~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~-~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~ 96 (601)
T KOG0590|consen 18 PNSQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPP-KSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSY 96 (601)
T ss_pred ccccccccccccccccchhhhhhhcCCCcceeeccCCCCCC-CccchhhhcCccccccccccccccccccCCccCCCccc
Confidence 4668999999999999999988763 344556667665443 22334455667888878886699999999999999999
Q ss_pred EEEEeccCCCchHHHH-HHcC-CCCHHHHHHHHHHHHHHHHHHH-HcCCeeccCCCCceeeeecCCCC-CEEEeecCCcc
Q 042823 100 HVVMELCEGGDLFDRI-IAKG-YNSERDAATVLRAIVNAVNVCH-SMGVMHRDLKPENFSFISRDDNA-LLKVTDFGSAL 175 (477)
Q Consensus 100 ~lv~e~~~gg~L~~~l-~~~~-~~~~~~~~~i~~qil~~L~~lH-~~~ivH~dlkp~Nil~~~~~~~~-~~kl~Dfg~a~ 175 (477)
+++++|..|+++++.+ .... ..+...+..++.|+..++.|+| ..++.||||||+|.++ +..+ .+|+.|||+|.
T Consensus 97 ~~~~~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~~~~h~~ikP~n~~l---~~s~~~l~~~df~~At 173 (601)
T KOG0590|consen 97 LLSLSYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPENGVTHRDIKPSNSLL---DESGSALKIADFGLAT 173 (601)
T ss_pred ccccCcccccccccccccCCccCCCCcchhhhhhhhccCccccCcccccccCCCCCccchh---ccCCCcccCCCchhhc
Confidence 9999999999999988 5544 5677888999999999999999 9999999999999877 5666 89999999998
Q ss_pred ccCC-C---cceecccc-cccccchhhhhh--hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHH-HHHHcCCccCCCC
Q 042823 176 LFEE-G---QVYRDIVG-SGFYIAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTY-DAILQGEIDFDTD 247 (477)
Q Consensus 176 ~~~~-~---~~~~~~~g-t~~y~aPE~~~~--~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~-~~i~~~~~~~~~~ 247 (477)
.+.. . ......+| ++.|+|||...+ ...+..|+||+|+++.-+++|..|+......... .........+...
T Consensus 174 ~~~~~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 253 (601)
T KOG0590|consen 174 AYRNKNGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGRYSSWKSNKGRFTQL 253 (601)
T ss_pred cccccCCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCccccccccccceeecccccccccC
Confidence 7655 2 22345678 999999999876 4578899999999999999999998665443321 2222222333456
Q ss_pred CCCCCCHHHHHHHHHhcccCccccCCHHHHhcCcccCc
Q 042823 248 PWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRE 285 (477)
Q Consensus 248 ~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~ 285 (477)
+|..++....+++.+++..+|..|.+..++-.+||+..
T Consensus 254 ~~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~~d~~~~~ 291 (601)
T KOG0590|consen 254 PWNSISDQAHDLLHKILKENPSNRLSIEELKLDNWLSS 291 (601)
T ss_pred ccccCChhhhhcccccccCCchhccccccccccccccc
Confidence 78889999999999999999999999999999999987
|
|
| >KOG0027 consensus Calmodulin and related proteins (EF-Hand superfamily) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.84 E-value=4.6e-20 Score=157.14 Aligned_cols=134 Identities=31% Similarity=0.503 Sum_probs=120.6
Q ss_pred CchhhHHHHHHhhhcCCCCCCCccHHHHHHHHHhhCCCCCHHHHHHHHHHhhcc----chHHHHHhcCChH---------
Q 042823 321 PDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNS----STLESLCENLPTK--------- 387 (477)
Q Consensus 321 ~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~----~~~~~~~~~~~~~--------- 387 (477)
+......++++|..+|.+++|.|+..||..+++.+|..|++.++..+++.+|.+ .++.+|+..+...
T Consensus 3 ~~~~~~el~~~F~~fD~d~~G~i~~~el~~~lr~lg~~~t~~el~~~~~~~D~dg~g~I~~~eF~~l~~~~~~~~~~~~~ 82 (151)
T KOG0027|consen 3 SEEQILELKEAFQLFDKDGDGKISVEELGAVLRSLGQNPTEEELRDLIKEIDLDGDGTIDFEEFLDLMEKLGEEKTDEEA 82 (151)
T ss_pred CHHHHHHHHHHHHHHCCCCCCcccHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHhhhcccccccc
Confidence 456678899999999999999999999999999999999999999999999854 3577766644321
Q ss_pred HHHHHHHHhhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHh
Q 042823 388 EKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTD 454 (477)
Q Consensus 388 ~~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~ 454 (477)
..+++++||+.||+|++|+||.+||+.+|..+|...+.++++.+++.+|.|+||.|+|+||+.+|..
T Consensus 83 ~~~el~eaF~~fD~d~~G~Is~~el~~~l~~lg~~~~~~e~~~mi~~~d~d~dg~i~f~ef~~~m~~ 149 (151)
T KOG0027|consen 83 SSEELKEAFRVFDKDGDGFISASELKKVLTSLGEKLTDEECKEMIREVDVDGDGKVNFEEFVKMMSG 149 (151)
T ss_pred cHHHHHHHHHHHccCCCCcCcHHHHHHHHHHhCCcCCHHHHHHHHHhcCCCCCCeEeHHHHHHHHhc
Confidence 2459999999999999999999999999999999999999999999999999999999999999864
|
|
| >KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=99.83 E-value=4.5e-21 Score=184.27 Aligned_cols=176 Identities=30% Similarity=0.468 Sum_probs=135.0
Q ss_pred CCeEEEEEeccCCCchHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecC
Q 042823 96 ETAVHVVMELCEGGDLFDRIIAKG---YNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFG 172 (477)
Q Consensus 96 ~~~~~lv~e~~~gg~L~~~l~~~~---~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg 172 (477)
..++||.|++|...+|.++|..+. ..+...+..++.|+..|+.| +|.+|||+||.||++ ..+..+||.|||
T Consensus 328 ~~~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k~~ihrdlkp~nif~---~~d~q~kIgDFg 401 (516)
T KOG1033|consen 328 KVYLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---KGLIHRDLKPSNIFF---SDDDQLKIGDFG 401 (516)
T ss_pred ccchhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---ccchhhhcccccccc---ccchhhhhhhhh
Confidence 346899999999999999997543 34667788999999999999 999999999999988 555689999999
Q ss_pred CccccCCCc-------ceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhh-CCCCCCCCChhhHHHHHHcCCcc
Q 042823 173 SALLFEEGQ-------VYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQGEID 243 (477)
Q Consensus 173 ~a~~~~~~~-------~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~t-g~~pf~~~~~~~~~~~i~~~~~~ 243 (477)
+........ .....+||.+||+||.+.+ .|+.++||||||+|++||++ =..+| ........+..+.++
T Consensus 402 l~ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~~f~T~~---er~~t~~d~r~g~ip 478 (516)
T KOG1033|consen 402 LVTSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLIQFSTQF---ERIATLTDIRDGIIP 478 (516)
T ss_pred heeecccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHHHhccHH---HHHHhhhhhhcCCCC
Confidence 987765443 3456789999999999985 69999999999999999997 22222 112233334444332
Q ss_pred CCCCCCCCCCHHHHHHHHHhcccCccccCCHHHHhcCccc
Q 042823 244 FDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWL 283 (477)
Q Consensus 244 ~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~ 283 (477)
+..+.. .++-..|+.+||.+.|.+||++.+.--|+|.
T Consensus 479 --~~~~~d-~p~e~~ll~~lls~~p~~RP~~~~~~~~~~~ 515 (516)
T KOG1033|consen 479 --PEFLQD-YPEEYTLLQQLLSPSPEERPSAIEVALHEFL 515 (516)
T ss_pred --hHHhhc-CcHHHHHHHHhcCCCcccCchHHHHhhhhhc
Confidence 112222 2455789999999999999988777777764
|
|
| >PRK14879 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=4.5e-19 Score=160.93 Aligned_cols=137 Identities=26% Similarity=0.273 Sum_probs=112.4
Q ss_pred ccccccCCeEEEEEEEccCCceEEEEEeecCCccch-----hhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEE
Q 042823 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRL-----AENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVVM 103 (477)
Q Consensus 29 ~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~-----~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~lv~ 103 (477)
+.||+|++|.||+|.+ .|..+++|+......... .......+|+.++..+ .|++|+....++......++||
T Consensus 2 ~~l~~G~~~~vy~~~~--~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~~~~i~~p~~~~~~~~~~~lv~ 78 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF--LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRA-RKAGVNVPAVYFVDPENFIIVM 78 (211)
T ss_pred cccccCceEEEEEEee--CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHH-HHCCCCCCeEEEEeCCCCEEEE
Confidence 6799999999999987 678899997643221111 1234577899999888 5888887777777778889999
Q ss_pred eccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccc
Q 042823 104 ELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALL 176 (477)
Q Consensus 104 e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~ 176 (477)
||++|++|.+.+..... ....++.+++.+|.++|+.|++|||++|.||++ + .+.++|+|||.+..
T Consensus 79 e~~~G~~L~~~~~~~~~----~~~~i~~~i~~~l~~lH~~~i~H~Dl~p~Nil~---~-~~~~~liDf~~a~~ 143 (211)
T PRK14879 79 EYIEGEPLKDLINSNGM----EELELSREIGRLVGKLHSAGIIHGDLTTSNMIL---S-GGKIYLIDFGLAEF 143 (211)
T ss_pred EEeCCcCHHHHHHhccH----HHHHHHHHHHHHHHHHHhCCcccCCCCcccEEE---E-CCCEEEEECCcccC
Confidence 99999999998865432 778899999999999999999999999999999 3 67799999998865
|
|
| >TIGR03724 arch_bud32 Kae1-associated kinase Bud32 | Back alignment and domain information |
|---|
Probab=99.80 E-value=1e-18 Score=157.12 Aligned_cols=134 Identities=23% Similarity=0.223 Sum_probs=105.3
Q ss_pred cccccCCeEEEEEEEccCCceEEEEEeecCCccc-----hhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEe
Q 042823 30 MLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMR-----LAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVVME 104 (477)
Q Consensus 30 ~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~-----~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~lv~e 104 (477)
.||+|+||.||+|.+ ++..+++|......... ......+.+|++++..+ .|+++....-++......++|||
T Consensus 1 ~ig~G~~~~vy~~~~--~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~~~~i~~p~~~~~~~~~~~lv~e 77 (199)
T TIGR03724 1 LIAKGAEAIIYLGDF--LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRA-RKAGVNTPVVYDVDPDNKTIVME 77 (199)
T ss_pred CCCCCceEEEEEeec--CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHH-HHCCCCCCEEEEEECCCCEEEEE
Confidence 489999999999984 57889999865432111 11235677899999998 47665555545556667789999
Q ss_pred ccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCcccc
Q 042823 105 LCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLF 177 (477)
Q Consensus 105 ~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~ 177 (477)
|++|++|.+.+..... .++.+++.+|.+||+.|++|||++|.||++ + .+.++++|||++...
T Consensus 78 ~~~g~~l~~~~~~~~~-------~~~~~i~~~l~~lH~~gi~H~Dl~~~Nil~---~-~~~~~liDfg~a~~~ 139 (199)
T TIGR03724 78 YIEGKPLKDVIEEGND-------ELLREIGRLVGKLHKAGIVHGDLTTSNIIV---R-DDKLYLIDFGLGKYS 139 (199)
T ss_pred EECCccHHHHHhhcHH-------HHHHHHHHHHHHHHHCCeecCCCCcceEEE---E-CCcEEEEECCCCcCC
Confidence 9999999887755321 789999999999999999999999999998 3 678999999988764
|
Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine. |
| >KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.79 E-value=4.4e-19 Score=173.89 Aligned_cols=197 Identities=25% Similarity=0.314 Sum_probs=154.7
Q ss_pred hccCCCCeeEEEEEEEeCCeEEEEEeccCCCchHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHcCC-eeccCCCCcee
Q 042823 79 YLSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIA-KGYNSERDAATVLRAIVNAVNVCHSMGV-MHRDLKPENFS 156 (477)
Q Consensus 79 ~l~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~-~~~~~~~~~~~i~~qil~~L~~lH~~~i-vH~dlkp~Nil 156 (477)
.+ .|.|+.++++.+.+....++|.+||+-|+|.+.+.. ...++..-...++++|+.||.|||.-.| .|+.+++.|.+
T Consensus 3 ~l-~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~~~~~d~~F~~s~~rdi~~Gl~ylh~s~i~~hg~l~s~nCl 81 (484)
T KOG1023|consen 3 QL-DHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSNEDIKLDYFFILSFIRDISKGLAYLHNSPIGYHGALKSSNCL 81 (484)
T ss_pred cc-chhhhhhheeeEecCCceEEEEeeecCccHHhHHhccccCccHHHHHHHHHHHHHHHHHHhcCcceeeeeeccccce
Confidence 44 699999999999999999999999999999999987 3456777778899999999999999876 99999999988
Q ss_pred eeecCCCCCEEEeecCCccccCCC---cceecccccccccchhhhhhh--------cCCccchHhHHHHHHHHhhCCCCC
Q 042823 157 FISRDDNALLKVTDFGSALLFEEG---QVYRDIVGSGFYIAPEVLRRR--------YGKEIDIWSAGVILYILLSGVPPF 225 (477)
Q Consensus 157 ~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~~~gt~~y~aPE~~~~~--------~~~~~DiwslG~il~~l~tg~~pf 225 (477)
+ +....+||+|||+....... .......-...|.|||.+++. .+.++||||+|+|++|+++...||
T Consensus 82 v---d~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~~~~ 158 (484)
T KOG1023|consen 82 V---DSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRSGPF 158 (484)
T ss_pred e---eeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhccCcc
Confidence 8 88889999999988766421 111112234569999998652 467899999999999999999999
Q ss_pred CCCCh----hhHHHHHHc-CCccCCCCCCC--CCCHHHHHHHHHhcccCccccCCHHHHhc
Q 042823 226 WAETK----KGTYDAILQ-GEIDFDTDPWP--SISSTAKDLVRRMLTKDPKRRITAAQVLE 279 (477)
Q Consensus 226 ~~~~~----~~~~~~i~~-~~~~~~~~~~~--~~~~~~~~li~~~l~~dp~~R~s~~~~l~ 279 (477)
..... .+....+.. +...+.+..+. ..++++..++..||..+|..||++.++-.
T Consensus 159 ~~~~~~~~~~eii~~~~~~~~~~~rP~i~~~~e~~~~l~~l~~~cw~e~P~~rPs~~~i~~ 219 (484)
T KOG1023|consen 159 DLRNLVEDPDEIILRVKKGGSNPFRPSIELLNELPPELLLLVARCWEEIPEKRPSIEQIRS 219 (484)
T ss_pred ccccccCChHHHHHHHHhcCCCCcCcchhhhhhcchHHHHHHHHhcccChhhCccHHHHHh
Confidence 76322 234445555 33323322221 35567999999999999999999999854
|
|
| >cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.2e-18 Score=156.33 Aligned_cols=141 Identities=21% Similarity=0.210 Sum_probs=107.5
Q ss_pred cccccccccccCCeEEEEEEEccCCceEEEEEeecCCccch-------------------hhHHHHHHHHHHHHhccCCC
Q 042823 24 HYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRL-------------------AENDMIRREIQIRLYLSGQP 84 (477)
Q Consensus 24 ~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~-------------------~~~~~~~~e~~~~~~l~~hp 84 (477)
.|.+.++||+|+||.||+|.+. +|+.||||++........ .......+|+.++..+ .|+
T Consensus 16 ~~~~~~~i~~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~~~ 93 (198)
T cd05144 16 VESLGNQIGVGKESDVYLALDP-DGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKAL-YEE 93 (198)
T ss_pred hhhcCCccccCcceEEEEEEcC-CCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHH-HHc
Confidence 3888999999999999999875 799999998764321000 0112356788888888 465
Q ss_pred --CeeEEEEEEEeCCeEEEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCC
Q 042823 85 --NVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDD 162 (477)
Q Consensus 85 --niv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~ 162 (477)
.++..++ ....++||||++|++|..... ......++.+++.++.++|+.|++||||||+||++ +.
T Consensus 94 ~i~v~~~~~----~~~~~lv~e~~~g~~L~~~~~------~~~~~~~~~~i~~~l~~lh~~gi~H~Dl~p~Nill---~~ 160 (198)
T cd05144 94 GFPVPKPID----WNRHAVVMEYIDGVELYRVRV------LEDPEEVLDEILEEIVKAYKHGIIHGDLSEFNILV---DD 160 (198)
T ss_pred CCCCCceee----cCCceEEEEEeCCcchhhccc------cccHHHHHHHHHHHHHHHHHCCCCcCCCCcccEEE---cC
Confidence 4444443 234589999999999865432 13456788999999999999999999999999999 66
Q ss_pred CCCEEEeecCCccccCC
Q 042823 163 NALLKVTDFGSALLFEE 179 (477)
Q Consensus 163 ~~~~kl~Dfg~a~~~~~ 179 (477)
++.++|+|||.+.....
T Consensus 161 ~~~~~liDfg~~~~~~~ 177 (198)
T cd05144 161 DEKIYIIDWPQMVSTDH 177 (198)
T ss_pred CCcEEEEECCccccCCC
Confidence 78999999999965543
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom |
| >KOG0028 consensus Ca2+-binding protein (centrin/caltractin), EF-Hand superfamily protein [Cytoskeleton; Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.78 E-value=4.8e-18 Score=136.90 Aligned_cols=136 Identities=26% Similarity=0.479 Sum_probs=122.5
Q ss_pred cCCchhhHHHHHHhhhcCCCCCCCccHHHHHHHHHhhCCCCCHHHHHHHHHHhhccc----hHHHHHhcCCh-----HHH
Q 042823 319 YLPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNSS----TLESLCENLPT-----KEK 389 (477)
Q Consensus 319 ~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~----~~~~~~~~~~~-----~~~ 389 (477)
.+..++.+.+++.|..||.+++|+|+..||..+++.+|..+...++.+++..+|+.+ .|+.|...++. +..
T Consensus 26 ~l~~~q~q~i~e~f~lfd~~~~g~iD~~EL~vAmralGFE~~k~ei~kll~d~dk~~~g~i~fe~f~~~mt~k~~e~dt~ 105 (172)
T KOG0028|consen 26 ELTEEQKQEIKEAFELFDPDMAGKIDVEELKVAMRALGFEPKKEEILKLLADVDKEGSGKITFEDFRRVMTVKLGERDTK 105 (172)
T ss_pred cccHHHHhhHHHHHHhhccCCCCcccHHHHHHHHHHcCCCcchHHHHHHHHhhhhccCceechHHHHHHHHHHHhccCcH
Confidence 345677789999999999999999999999999999999999999999999999743 46666555432 357
Q ss_pred HHHHHHhhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHh
Q 042823 390 QKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTD 454 (477)
Q Consensus 390 ~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~ 454 (477)
++++.+|+.+|-|++|.|+..+|+.+...||.+++++++.+|+.++|.++||.|+-+||+.+|.+
T Consensus 106 eEi~~afrl~D~D~~Gkis~~~lkrvakeLgenltD~El~eMIeEAd~d~dgevneeEF~~imk~ 170 (172)
T KOG0028|consen 106 EEIKKAFRLFDDDKTGKISQRNLKRVAKELGENLTDEELMEMIEEADRDGDGEVNEEEFIRIMKK 170 (172)
T ss_pred HHHHHHHHcccccCCCCcCHHHHHHHHHHhCccccHHHHHHHHHHhcccccccccHHHHHHHHhc
Confidence 89999999999999999999999999999999999999999999999999999999999999864
|
|
| >KOG0031 consensus Myosin regulatory light chain, EF-Hand protein superfamily [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=99.77 E-value=8.5e-18 Score=134.30 Aligned_cols=138 Identities=20% Similarity=0.415 Sum_probs=125.7
Q ss_pred hhccCCchhhHHHHHHhhhcCCCCCCCccHHHHHHHHHhhCCCCCHHHHHHHHHHhhccchHHHHHhcCC-----hHHHH
Q 042823 316 IVEYLPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNSSTLESLCENLP-----TKEKQ 390 (477)
Q Consensus 316 i~~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-----~~~~~ 390 (477)
+...+.+.++++++++|..+|.|+||.|+.++|...|.++|..++++++..++++..+..+|..|...+. .+..+
T Consensus 22 vFamf~q~QIqEfKEAF~~mDqnrDG~IdkeDL~d~~aSlGk~~~d~elDaM~~Ea~gPINft~FLTmfGekL~gtdpe~ 101 (171)
T KOG0031|consen 22 VFAMFDQSQIQEFKEAFNLMDQNRDGFIDKEDLRDMLASLGKIASDEELDAMMKEAPGPINFTVFLTMFGEKLNGTDPEE 101 (171)
T ss_pred HHHHhhHHHHHHHHHHHHHHhccCCCcccHHHHHHHHHHcCCCCCHHHHHHHHHhCCCCeeHHHHHHHHHHHhcCCCHHH
Confidence 4456678899999999999999999999999999999999999999999999999988888776665432 23467
Q ss_pred HHHHHhhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHH
Q 042823 391 KLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMT 453 (477)
Q Consensus 391 ~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~ 453 (477)
.+..||+.||.+++|.|..+.|+.+|...|.+++++||+.+++.+-.+..|.++|.+|+.++.
T Consensus 102 ~I~~AF~~FD~~~~G~I~~d~lre~Ltt~gDr~~~eEV~~m~r~~p~d~~G~~dy~~~~~~it 164 (171)
T KOG0031|consen 102 VILNAFKTFDDEGSGKIDEDYLRELLTTMGDRFTDEEVDEMYREAPIDKKGNFDYKAFTYIIT 164 (171)
T ss_pred HHHHHHHhcCccCCCccCHHHHHHHHHHhcccCCHHHHHHHHHhCCcccCCceeHHHHHHHHH
Confidence 899999999999999999999999999999999999999999999999999999999999987
|
|
| >PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated | Back alignment and domain information |
|---|
Probab=99.77 E-value=4.6e-18 Score=175.26 Aligned_cols=141 Identities=21% Similarity=0.176 Sum_probs=111.7
Q ss_pred cccccccccccccCCeEEEEEEEccCCceEEEEEeecCCcc-----chhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeC
Q 042823 22 MLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKM-----RLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDE 96 (477)
Q Consensus 22 ~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~-----~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~ 96 (477)
...|...+.||+|+||+||++.+. +..+++|+...+... .......+.+|++++..+ .|++++....++...
T Consensus 332 ~~~~~~~~~iG~G~~g~Vy~~~~~--~~~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~~~~i~~p~~~~~~~ 408 (535)
T PRK09605 332 KRRKIPDHLIGKGAEADIKKGEYL--GRDAVIKERVPKGYRHPELDERLRTERTRAEARLLSEA-RRAGVPTPVIYDVDP 408 (535)
T ss_pred ccccCccceeccCCcEEEEEEeec--CccceeEEEecccccchhHHHHHHHHHHHHHHHHHHhh-cccCCCeeEEEEEeC
Confidence 345567899999999999999864 334555543222111 112235678999999999 699999888777777
Q ss_pred CeEEEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccc
Q 042823 97 TAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALL 176 (477)
Q Consensus 97 ~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~ 176 (477)
...++||||++|++|.+++. ....++.+++.+|.+||+.|++||||||+||++ .++.++|+|||++..
T Consensus 409 ~~~~lv~E~~~g~~L~~~l~--------~~~~~~~~i~~~L~~lH~~giiHrDlkp~NILl----~~~~~~liDFGla~~ 476 (535)
T PRK09605 409 EEKTIVMEYIGGKDLKDVLE--------GNPELVRKVGEIVAKLHKAGIVHGDLTTSNFIV----RDDRLYLIDFGLGKY 476 (535)
T ss_pred CCCEEEEEecCCCcHHHHHH--------HHHHHHHHHHHHHHHHHhCCCccCCCChHHEEE----ECCcEEEEeCccccc
Confidence 78899999999999998875 356789999999999999999999999999999 356799999999875
Q ss_pred c
Q 042823 177 F 177 (477)
Q Consensus 177 ~ 177 (477)
.
T Consensus 477 ~ 477 (535)
T PRK09605 477 S 477 (535)
T ss_pred C
Confidence 4
|
|
| >cd05119 RIO RIO kinase family, catalytic domain | Back alignment and domain information |
|---|
Probab=99.76 E-value=5.5e-18 Score=150.72 Aligned_cols=143 Identities=17% Similarity=0.169 Sum_probs=99.8
Q ss_pred ccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHH---------------------HHHHHHHHHHhccCC-C
Q 042823 27 FGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAEND---------------------MIRREIQIRLYLSGQ-P 84 (477)
Q Consensus 27 ~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~---------------------~~~~e~~~~~~l~~h-p 84 (477)
+.+.||+|+||.||+|.+. +++.||+|++............ ....|...+..+..+ .
T Consensus 1 ~~~~lg~G~~g~Vy~a~~~-~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~ 79 (187)
T cd05119 1 VGGPIGTGKEADVYLALDG-DGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGV 79 (187)
T ss_pred CCcccccccceeEEEEECC-CCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCC
Confidence 3578999999999999986 7999999998653221111111 113556666665322 2
Q ss_pred CeeEEEEEEEeCCeEEEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH-cCCeeccCCCCceeeeecCCC
Q 042823 85 NVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHS-MGVMHRDLKPENFSFISRDDN 163 (477)
Q Consensus 85 niv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~-~~ivH~dlkp~Nil~~~~~~~ 163 (477)
.+++++.+. ..++||||++|+++........... ..+..++.+++.++.++|+ .||+||||||+||++ + +
T Consensus 80 ~~~~~~~~~----~~~lv~e~~~g~~~~~~~l~~~~~~-~~~~~~~~~~~~~l~~lh~~~~ivH~Dl~p~Nili---~-~ 150 (187)
T cd05119 80 PVPKPIDLN----RHVLVMEFIGGDGIPAPRLKDVRLL-EDPEELYDQILELMRKLYREAGLVHGDLSEYNILV---D-D 150 (187)
T ss_pred CCCceEecC----CCEEEEEEeCCCCccChhhhhhhhc-ccHHHHHHHHHHHHHHHhhccCcCcCCCChhhEEE---E-C
Confidence 355555432 3589999999954432111111111 6678999999999999999 999999999999999 3 6
Q ss_pred CCEEEeecCCccccCC
Q 042823 164 ALLKVTDFGSALLFEE 179 (477)
Q Consensus 164 ~~~kl~Dfg~a~~~~~ 179 (477)
+.++|+|||.+.....
T Consensus 151 ~~~~liDfg~a~~~~~ 166 (187)
T cd05119 151 GKVYIIDVPQAVEIDH 166 (187)
T ss_pred CcEEEEECcccccccC
Confidence 7899999999975543
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct |
| >COG5126 FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only] | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.8e-17 Score=137.60 Aligned_cols=95 Identities=33% Similarity=0.447 Sum_probs=89.4
Q ss_pred hcCChHHHHHHHHHhhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhhhC-CCc
Q 042823 382 ENLPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIYK-LET 460 (477)
Q Consensus 382 ~~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~~~-~~~ 460 (477)
..++.+++++++++|..||+|++|.|+..||..+|+.+|.++++.++.+++..+|. ++|.|+|.+|+.+|..... ...
T Consensus 12 ~~~t~~qi~~lkeaF~l~D~d~~G~I~~~el~~ilr~lg~~~s~~ei~~l~~~~d~-~~~~idf~~Fl~~ms~~~~~~~~ 90 (160)
T COG5126 12 TQLTEEQIQELKEAFQLFDRDSDGLIDRNELGKILRSLGFNPSEAEINKLFEEIDA-GNETVDFPEFLTVMSVKLKRGDK 90 (160)
T ss_pred ccCCHHHHHHHHHHHHHhCcCCCCCCcHHHHHHHHHHcCCCCcHHHHHHHHHhccC-CCCccCHHHHHHHHHHHhccCCc
Confidence 35788999999999999999999999999999999999999999999999999999 9999999999999987764 566
Q ss_pred HHHHHHHHHHhccCCCC
Q 042823 461 PELLEKAFQYLDKNSDQ 477 (477)
Q Consensus 461 ~~~l~~aF~~~D~d~~G 477 (477)
++++++||++||+|+||
T Consensus 91 ~Eel~~aF~~fD~d~dG 107 (160)
T COG5126 91 EEELREAFKLFDKDHDG 107 (160)
T ss_pred HHHHHHHHHHhCCCCCc
Confidence 89999999999999998
|
|
| >KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.72 E-value=4.3e-18 Score=167.01 Aligned_cols=261 Identities=20% Similarity=0.216 Sum_probs=201.7
Q ss_pred ccccccccccccccccc--cCCeEEEEEEE--ccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEE
Q 042823 17 AYEDVMLHYFFGRMLGR--GQFGVSYLCTE--NSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKST 92 (477)
Q Consensus 17 ~~~~~~~~Y~~~~~iG~--G~~g~V~~~~~--~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~ 92 (477)
....+...+.+...+|. |.+|.||.+.. ..++..+|+|.-.... ........-.+|+.....+..|+|.++.+..
T Consensus 108 ~~s~~~~~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~-s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~ 186 (524)
T KOG0601|consen 108 FDSFFDQRFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPF-SPPLDSKRKLREFLSHHKIDSHENPVRDSPA 186 (524)
T ss_pred ccchhhhhcccccccccCCCCCceeecccCCcccCCcccccccccCCC-CCccccccccchhhcccccCccccccccCcc
Confidence 34456667888899999 99999999988 8899999999743221 1112222334677777777789999999999
Q ss_pred EEeCCeEEEEEeccCCCchHHHHHHcCC-CCHHHHHHHHHHHHH----HHHHHHHcCCeeccCCCCceeeeecCCC-CCE
Q 042823 93 YEDETAVHVVMELCEGGDLFDRIIAKGY-NSERDAATVLRAIVN----AVNVCHSMGVMHRDLKPENFSFISRDDN-ALL 166 (477)
Q Consensus 93 ~~~~~~~~lv~e~~~gg~L~~~l~~~~~-~~~~~~~~i~~qil~----~L~~lH~~~ivH~dlkp~Nil~~~~~~~-~~~ 166 (477)
|+..+..|+-+|+|. .+|..+...... +++..++..+.+... ||.++|+.+++|-|+||.||+. ..+ ..+
T Consensus 187 ~e~~~~lfiqtE~~~-~sl~~~~~~~~~~~p~~~l~~~~~~~~~~~~~al~~~hs~~~~~~~~kp~~i~~---~~~~~s~ 262 (524)
T KOG0601|consen 187 WEGSGILFIQTELCG-ESLQSYCHTPCNFLPDNLLWNSLRDWLSRDVTALSHLHSNNIVHDDLKPANIFT---TSDWTSC 262 (524)
T ss_pred cccCCcceeeecccc-chhHHhhhcccccCCchhhhhHHhhhhhcccccccccCCCcccccccchhheec---cccccee
Confidence 999999999999995 688888877655 789999999999999 9999999999999999999988 455 789
Q ss_pred EEeecCCccccCCCcce------ecccccccccchhhhhhhcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcC
Q 042823 167 KVTDFGSALLFEEGQVY------RDIVGSGFYIAPEVLRRRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQG 240 (477)
Q Consensus 167 kl~Dfg~a~~~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~ 240 (477)
+++|||+...+...... ....|...|++||..++-++...|++|+|.++.+-.+|..++...-.. .+..+.++
T Consensus 263 ~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~-~W~~~r~~ 341 (524)
T KOG0601|consen 263 KLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNS-SWSQLRQG 341 (524)
T ss_pred ecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCC-Cccccccc
Confidence 99999988876554311 122577889999999999999999999999999988887666443111 11111111
Q ss_pred CccCCCCCCCCCCHHHHHHHHHhcccCccccCCHHHHhcCcccCc
Q 042823 241 EIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRE 285 (477)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~ 285 (477)
. .+.......+..+...+..|+..+|..|++++.+++|+++..
T Consensus 342 ~--ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l~~i~s 384 (524)
T KOG0601|consen 342 Y--IPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTALNVIHS 384 (524)
T ss_pred c--CchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhccccccc
Confidence 1 122222345667777999999999999999999999999873
|
|
| >KOG0037 consensus Ca2+-binding protein, EF-Hand protein superfamily [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.71 E-value=3.6e-16 Score=133.53 Aligned_cols=146 Identities=23% Similarity=0.255 Sum_probs=125.6
Q ss_pred hhHHHHHHhhhcCCCCCCCccHHHHHHHHHhhCCCC-CHHHHHHHHHHhhccc----hHHHHHhcCChHHHHHHHHHhhh
Q 042823 324 ETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSML-TEFDVKHLMEAVKNSS----TLESLCENLPTKEKQKLMEKFRE 398 (477)
Q Consensus 324 ~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~-~~~~~~~~~~~~d~~~----~~~~~~~~~~~~~~~~l~~~F~~ 398 (477)
....+...|...|+|+.|.|+.+||.++|....+.+ +.+-+..|+..+|++. .+.+|.+. ..-+..++.+|+.
T Consensus 55 ~~~~~~~~f~~vD~d~sg~i~~~eLq~aLsn~~~~~Fs~~TcrlmI~mfd~~~~G~i~f~EF~~L--w~~i~~Wr~vF~~ 132 (221)
T KOG0037|consen 55 TFPQLAGWFQSVDRDRSGRILAKELQQALSNGTWSPFSIETCRLMISMFDRDNSGTIGFKEFKAL--WKYINQWRNVFRT 132 (221)
T ss_pred ccHHHHHHHHhhCccccccccHHHHHHHhhcCCCCCCCHHHHHHHHHHhcCCCCCccCHHHHHHH--HHHHHHHHHHHHh
Confidence 445778899999999999999999999999876655 5566777888998653 35555442 2446799999999
Q ss_pred hcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhhhCCCcHHHHHHHHHHhccCCCC
Q 042823 399 MDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIYKLETPELLEKAFQYLDKNSDQ 477 (477)
Q Consensus 399 ~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~l~~aF~~~D~d~~G 477 (477)
||+|++|.|+..||+.+|..+|..++++-++.+++.+|..++|.|.|++|++++.... .+.++|+.+|++.+|
T Consensus 133 ~D~D~SG~I~~sEL~~Al~~~Gy~Lspq~~~~lv~kyd~~~~g~i~FD~FI~ccv~L~------~lt~~Fr~~D~~q~G 205 (221)
T KOG0037|consen 133 YDRDRSGTIDSSELRQALTQLGYRLSPQFYNLLVRKYDRFGGGRIDFDDFIQCCVVLQ------RLTEAFRRRDTAQQG 205 (221)
T ss_pred cccCCCCcccHHHHHHHHHHcCcCCCHHHHHHHHHHhccccCCceeHHHHHHHHHHHH------HHHHHHHHhccccce
Confidence 9999999999999999999999999999999999999988899999999999997643 688999999999876
|
|
| >PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed | Back alignment and domain information |
|---|
Probab=99.70 E-value=2.9e-16 Score=144.22 Aligned_cols=139 Identities=19% Similarity=0.212 Sum_probs=103.0
Q ss_pred ccccc-ccCCeEEEEEEEccCCceEEEEEeecCCc----------cchhhHHHHHHHHHHHHhccCCCCe--eEEEEEEE
Q 042823 28 GRMLG-RGQFGVSYLCTENSTNRPYACKSIAKKPK----------MRLAENDMIRREIQIRLYLSGQPNV--VEFKSTYE 94 (477)
Q Consensus 28 ~~~iG-~G~~g~V~~~~~~~~~~~~aiK~~~~~~~----------~~~~~~~~~~~e~~~~~~l~~hpni--v~~~~~~~ 94 (477)
...|| .||.|+||.+.. .+..+++|.+..... ..........+|+.++..| .|++| ++.+++..
T Consensus 36 ~~~lg~~~g~gtv~~v~~--~~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L-~~~gi~vP~pl~~~~ 112 (239)
T PRK01723 36 ARVVGSAKGRGTTWFVQT--PGVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQL-YEAGLPVPRPIAARV 112 (239)
T ss_pred CceeecCCCCccEEEEEe--CCceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHH-HhCCCCCceeEeeee
Confidence 35687 888899998875 377899998854211 0112335678899999999 57664 67776643
Q ss_pred eC-Ce---EEEEEeccCC-CchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEe
Q 042823 95 DE-TA---VHVVMELCEG-GDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVT 169 (477)
Q Consensus 95 ~~-~~---~~lv~e~~~g-g~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~ 169 (477)
.. .. .++|||+++| .+|.+++.. ..+++. .+.|++.+|.+||++||+||||||.|||+ +.++.++|+
T Consensus 113 ~~~~~~~~~~lV~e~l~G~~~L~~~l~~-~~l~~~----~~~~i~~~l~~lH~~GI~HrDlkp~NILv---~~~~~v~LI 184 (239)
T PRK01723 113 VRHGLFYRADILIERIEGARDLVALLQE-APLSEE----QWQAIGQLIARFHDAGVYHADLNAHNILL---DPDGKFWLI 184 (239)
T ss_pred eecCcceeeeEEEEecCCCCCHHHHHhc-CCCCHH----HHHHHHHHHHHHHHCCCCCCCCCchhEEE---cCCCCEEEE
Confidence 32 22 2599999998 688877754 445554 36789999999999999999999999999 556689999
Q ss_pred ecCCcccc
Q 042823 170 DFGSALLF 177 (477)
Q Consensus 170 Dfg~a~~~ 177 (477)
|||.+...
T Consensus 185 Dfg~~~~~ 192 (239)
T PRK01723 185 DFDRGELR 192 (239)
T ss_pred ECCCcccC
Confidence 99988753
|
|
| >KOG0027 consensus Calmodulin and related proteins (EF-Hand superfamily) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.68 E-value=2.4e-16 Score=134.28 Aligned_cols=94 Identities=33% Similarity=0.531 Sum_probs=85.7
Q ss_pred CChHHHHHHHHHhhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhhhCCC----
Q 042823 384 LPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIYKLE---- 459 (477)
Q Consensus 384 ~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~~---- 459 (477)
++..+..+++++|+.||+|++|+|+..||..+++.+|..+++.++..+++++|.+++|.|+|+||+.++.......
T Consensus 2 ~~~~~~~el~~~F~~fD~d~~G~i~~~el~~~lr~lg~~~t~~el~~~~~~~D~dg~g~I~~~eF~~l~~~~~~~~~~~~ 81 (151)
T KOG0027|consen 2 LSEEQILELKEAFQLFDKDGDGKISVEELGAVLRSLGQNPTEEELRDLIKEIDLDGDGTIDFEEFLDLMEKLGEEKTDEE 81 (151)
T ss_pred CCHHHHHHHHHHHHHHCCCCCCcccHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHhhhccccccc
Confidence 3456778999999999999999999999999999999999999999999999999999999999999998765522
Q ss_pred -cHHHHHHHHHHhccCCCC
Q 042823 460 -TPELLEKAFQYLDKNSDQ 477 (477)
Q Consensus 460 -~~~~l~~aF~~~D~d~~G 477 (477)
..+++++||++||+||+|
T Consensus 82 ~~~~el~eaF~~fD~d~~G 100 (151)
T KOG0027|consen 82 ASSEELKEAFRVFDKDGDG 100 (151)
T ss_pred ccHHHHHHHHHHHccCCCC
Confidence 346999999999999998
|
|
| >cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family | Back alignment and domain information |
|---|
Probab=99.68 E-value=4.8e-16 Score=132.88 Aligned_cols=133 Identities=23% Similarity=0.280 Sum_probs=110.3
Q ss_pred ccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCC-CCeeEEEEEEEeCCeEEEEEec
Q 042823 27 FGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQ-PNVVEFKSTYEDETAVHVVMEL 105 (477)
Q Consensus 27 ~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~h-pniv~~~~~~~~~~~~~lv~e~ 105 (477)
+++.||+|.++.||++.... ..+++|....... ...+.+|+.++..+..+ +++++++.++...+..+++|||
T Consensus 2 ~~~~i~~g~~~~v~~~~~~~--~~~~iK~~~~~~~-----~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~ 74 (155)
T cd05120 2 SIKLLKGGLTNRVYLLGTKD--EDYVLKINPSREK-----GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEW 74 (155)
T ss_pred cceecccccccceEEEEecC--CeEEEEecCCCCc-----hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEe
Confidence 46789999999999999743 6799998754322 35678899999999644 6899999998888899999999
Q ss_pred cCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHc---CCeeccCCCCceeeeecCCCCCEEEeecCCccc
Q 042823 106 CEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSM---GVMHRDLKPENFSFISRDDNALLKVTDFGSALL 176 (477)
Q Consensus 106 ~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~---~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~ 176 (477)
++|+++..+ +......++.+++.+|.++|.. +++|||++|+||++ ++.+.++++|||.+..
T Consensus 75 ~~g~~~~~~-------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~---~~~~~~~l~Df~~~~~ 138 (155)
T cd05120 75 IEGETLDEV-------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILV---DDGKILGIIDWEYAGY 138 (155)
T ss_pred cCCeecccC-------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEE---ECCcEEEEEecccccC
Confidence 999877543 5566678899999999999985 69999999999999 4567899999998864
|
The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves |
| >KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only] | Back alignment and domain information |
|---|
Probab=99.67 E-value=2.3e-17 Score=169.86 Aligned_cols=266 Identities=28% Similarity=0.439 Sum_probs=210.8
Q ss_pred cccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCC
Q 042823 18 YEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDET 97 (477)
Q Consensus 18 ~~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~ 97 (477)
|..-.+.+.+.+.+-+|+++.++.+.-..+|...++|+..+.+.........+..+-.++... .+|.+++....+....
T Consensus 799 yrsS~d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p-~~P~v~~~~~s~~~rs 877 (1205)
T KOG0606|consen 799 YRSSPDGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITP-RSPAVVRSFPSFPCRS 877 (1205)
T ss_pred ccCCCccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccC-CCCceecccCCCCCCC
Confidence 555666778888999999999999988888877777766544433222223333333333222 4677877766666677
Q ss_pred eEEEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCcccc
Q 042823 98 AVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLF 177 (477)
Q Consensus 98 ~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~ 177 (477)
..++|++|+.|++|...++..+..++..++..+..+..+++|||+..+.|||++|.|++. ...+..++.|||.....
T Consensus 878 P~~L~~~~~~~~~~~Skl~~~~~~saepaRs~i~~~vqs~e~L~s~~r~h~~~~p~~~l~---~~~gh~~l~~~~t~~~v 954 (1205)
T KOG0606|consen 878 PLPLVGHYLNGGDLPSKLHNSGCLSAEPARSPILERVQSLESLHSSLRKHRDLKPDSLLI---AYDGHRPLTDFGTLSKV 954 (1205)
T ss_pred CcchhhHHhccCCchhhhhcCCCcccccccchhHHHHhhhhccccchhhcccccccchhh---cccCCcccCcccccccc
Confidence 899999999999999999998888888889999999999999999999999999999887 77888999999733211
Q ss_pred C------C-------------------C-------cceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCC
Q 042823 178 E------E-------------------G-------QVYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPP 224 (477)
Q Consensus 178 ~------~-------------------~-------~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~p 224 (477)
. . . .......||+-|.+||...+ ..+..+|.|++|+++++.++|.+|
T Consensus 955 g~~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp 1034 (1205)
T KOG0606|consen 955 GLIPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIPP 1034 (1205)
T ss_pred ccccCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCCC
Confidence 0 0 0 01123478999999999875 578899999999999999999999
Q ss_pred CCCCChhhHHHHHHcCCccCCCCCCCCCCHHHHHHHHHhcccCccccCCHH---HHhcCcccCcCCC
Q 042823 225 FWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAA---QVLEHPWLRESGE 288 (477)
Q Consensus 225 f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~---~~l~h~~~~~~~~ 288 (477)
|.....+..+.++..+..+++.-+ ...+.++++++..+|..+|.+|..+. ++-.|+||+....
T Consensus 1035 ~na~tpq~~f~ni~~~~~~~p~g~-~~~s~~aq~~~~~ll~~~~~qr~~a~~~~e~k~~~~~~~~~~ 1100 (1205)
T KOG0606|consen 1035 FNAETPQQIFENILNRDIPWPEGP-EEGSYEAQDLINRLLTEEPTQRLGAKGAAEVKGHPFFQDVDW 1100 (1205)
T ss_pred CCCcchhhhhhccccCCCCCCCCc-cccChhhhhhhhhhhccCchhccCcccccccccCCccCCCCc
Confidence 999999999999998887765543 35788999999999999999999987 8889999987654
|
|
| >KOG0030 consensus Myosin essential light chain, EF-Hand protein superfamily [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=99.67 E-value=8.2e-16 Score=120.90 Aligned_cols=133 Identities=23% Similarity=0.358 Sum_probs=113.7
Q ss_pred CCchhhHHHHHHhhhcCCCCCCCccHHHHHHHHHhhCCCCCHHHHHHHHHHhhcc------chHHHHHhcC-------Ch
Q 042823 320 LPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNS------STLESLCENL-------PT 386 (477)
Q Consensus 320 ~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~------~~~~~~~~~~-------~~ 386 (477)
++++....++++|..||.++||+|+..+...+|+.+|.+|++.++.+.+.+.++. .+|+.|.-.+ ..
T Consensus 5 ~~~d~~~e~ke~F~lfD~~gD~ki~~~q~gdvlRalG~nPT~aeV~k~l~~~~~~~~~~~rl~FE~fLpm~q~vaknk~q 84 (152)
T KOG0030|consen 5 FTPDQMEEFKEAFLLFDRTGDGKISGSQVGDVLRALGQNPTNAEVLKVLGQPKRREMNVKRLDFEEFLPMYQQVAKNKDQ 84 (152)
T ss_pred cCcchHHHHHHHHHHHhccCcccccHHHHHHHHHHhcCCCcHHHHHHHHcCcccchhhhhhhhHHHHHHHHHHHHhcccc
Confidence 3556678999999999999999999999999999999999999999999888765 2455554333 22
Q ss_pred HHHHHHHHHhhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHH
Q 042823 387 KEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMT 453 (477)
Q Consensus 387 ~~~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~ 453 (477)
...+++-+-.+.||++++|.|...||+++|..+|..++++|++.+++-. .|.+|-|+|+.|+..+.
T Consensus 85 ~t~edfvegLrvFDkeg~G~i~~aeLRhvLttlGekl~eeEVe~Llag~-eD~nG~i~YE~fVk~i~ 150 (152)
T KOG0030|consen 85 GTYEDFVEGLRVFDKEGNGTIMGAELRHVLTTLGEKLTEEEVEELLAGQ-EDSNGCINYEAFVKHIM 150 (152)
T ss_pred CcHHHHHHHHHhhcccCCcceeHHHHHHHHHHHHhhccHHHHHHHHccc-cccCCcCcHHHHHHHHh
Confidence 3456788899999999999999999999999999999999999999754 36789999999998653
|
|
| >PTZ00184 calmodulin; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=2.4e-15 Score=128.36 Aligned_cols=136 Identities=26% Similarity=0.511 Sum_probs=117.9
Q ss_pred ccCCchhhHHHHHHhhhcCCCCCCCccHHHHHHHHHhhCCCCCHHHHHHHHHHhhccc----hHHHHHhcCC-----hHH
Q 042823 318 EYLPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNSS----TLESLCENLP-----TKE 388 (477)
Q Consensus 318 ~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~----~~~~~~~~~~-----~~~ 388 (477)
..++.++...++..|..+|.+++|.|+.+||..++..++..++..++..++..+|.+. ++++|...+. ...
T Consensus 3 ~~~~~~~~~~~~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~l~~~~~~~~~ 82 (149)
T PTZ00184 3 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTLMARKMKDTDS 82 (149)
T ss_pred CccCHHHHHHHHHHHHHHcCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHhcCcCCCCcCcHHHHHHHHHHhccCCcH
Confidence 4456778888999999999999999999999999999998888889999999887542 4555554332 123
Q ss_pred HHHHHHHhhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHH
Q 042823 389 KQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMT 453 (477)
Q Consensus 389 ~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~ 453 (477)
...+..+|+.+|.+++|.|+.+|+..++..+|..++.++++.+++.+|.+++|.|+|+||+.++.
T Consensus 83 ~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~ 147 (149)
T PTZ00184 83 EEEIKEAFKVFDRDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKMMM 147 (149)
T ss_pred HHHHHHHHHhhCCCCCCeEeHHHHHHHHHHHCCCCCHHHHHHHHHhcCCCCCCcCcHHHHHHHHh
Confidence 45789999999999999999999999999999999999999999999999999999999998875
|
|
| >PTZ00183 centrin; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=3.9e-15 Score=128.46 Aligned_cols=138 Identities=22% Similarity=0.478 Sum_probs=119.5
Q ss_pred hccCCchhhHHHHHHhhhcCCCCCCCccHHHHHHHHHhhCCCCCHHHHHHHHHHhhccc----hHHHHHhcCC-----hH
Q 042823 317 VEYLPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNSS----TLESLCENLP-----TK 387 (477)
Q Consensus 317 ~~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~----~~~~~~~~~~-----~~ 387 (477)
...+++.+...+...|..+|.+++|.|+..||..+++.+|..++...+..++..+|.++ ++.+|...+. ..
T Consensus 8 ~~~~~~~~~~~~~~~F~~~D~~~~G~i~~~e~~~~l~~~g~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~ 87 (158)
T PTZ00183 8 RPGLTEDQKKEIREAFDLFDTDGSGTIDPKELKVAMRSLGFEPKKEEIKQMIADVDKDGSGKIDFEEFLDIMTKKLGERD 87 (158)
T ss_pred cCCCCHHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHHhcCCC
Confidence 34467788889999999999999999999999999999998888899999999987533 3555544321 12
Q ss_pred HHHHHHHHhhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHh
Q 042823 388 EKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTD 454 (477)
Q Consensus 388 ~~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~ 454 (477)
..+.++.+|+.+|.+++|.|+.+||..++..+|..+++.++..++..+|.+++|.|+|++|..++..
T Consensus 88 ~~~~l~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~l~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~ 154 (158)
T PTZ00183 88 PREEILKAFRLFDDDKTGKISLKNLKRVAKELGETITDEELQEMIDEADRNGDGEISEEEFYRIMKK 154 (158)
T ss_pred cHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHhc
Confidence 3467899999999999999999999999999999999999999999999999999999999998864
|
|
| >KOG1266 consensus Protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.58 E-value=2.5e-16 Score=142.72 Aligned_cols=199 Identities=19% Similarity=0.187 Sum_probs=141.3
Q ss_pred HHHhccCCCCeeEEEEEEEeCC-----eEEEEEeccCCCchHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHcC--
Q 042823 76 IRLYLSGQPNVVEFKSTYEDET-----AVHVVMELCEGGDLFDRIIAK----GYNSERDAATVLRAIVNAVNVCHSMG-- 144 (477)
Q Consensus 76 ~~~~l~~hpniv~~~~~~~~~~-----~~~lv~e~~~gg~L~~~l~~~----~~~~~~~~~~i~~qil~~L~~lH~~~-- 144 (477)
.+.++ .|.|||+++.+|.+.. ...++.||++.|+|.++|++. ..+......+|+.||++||.|||+..
T Consensus 120 nllql-vHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~~Pp 198 (458)
T KOG1266|consen 120 NLLQL-VHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSCDPP 198 (458)
T ss_pred HHHHH-HHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhccCCc
Confidence 34455 5999999999986544 478999999999999999863 35678888899999999999999985
Q ss_pred CeeccCCCCceeeeecCCCCCEEEeecCCccccC---CCc--ceecccccccccchhhhh-hhcCCccchHhHHHHHHHH
Q 042823 145 VMHRDLKPENFSFISRDDNALLKVTDFGSALLFE---EGQ--VYRDIVGSGFYIAPEVLR-RRYGKEIDIWSAGVILYIL 218 (477)
Q Consensus 145 ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~---~~~--~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~l 218 (477)
|+|+++..+.|++ ..++.||+.---...... ... ......+-++|.|||.-. -+.+.++|||++|....+|
T Consensus 199 iihgnlTc~tifi---q~ngLIkig~~ap~s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAlem 275 (458)
T KOG1266|consen 199 IIHGNLTCDTIFI---QHNGLIKIGSVAPDSTHPSVNSTREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALEM 275 (458)
T ss_pred cccCCcchhheee---cCCceEEecccCccccchhhhhhhHhhhhccccCCccccCCcCcccccccchhhhhhhHHHHHH
Confidence 9999999999988 678888875322111100 000 011124678899998754 3567789999999999999
Q ss_pred hhCCCCCC-CCChhhHHHHHHcCCccCCCCCCCCCCHHHHHHHHHhcccCccccCCHHHHhcCcccCc
Q 042823 219 LSGVPPFW-AETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRE 285 (477)
Q Consensus 219 ~tg~~pf~-~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~ 285 (477)
..+..--. +.+.-..-.++.+...... ...-+.++.+||+-.|..||++..++.||.+-+
T Consensus 276 ailEiq~tnseS~~~~ee~ia~~i~~le-------n~lqr~~i~kcl~~eP~~rp~ar~llfHpllfe 336 (458)
T KOG1266|consen 276 AILEIQSTNSESKVEVEENIANVIIGLE-------NGLQRGSITKCLEGEPNGRPDARLLLFHPLLFE 336 (458)
T ss_pred HHheeccCCCcceeehhhhhhhheeecc-------CccccCcCcccccCCCCCCcchhhhhcCceeee
Confidence 98765422 2222222222222221111 122357899999999999999999999998654
|
|
| >PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed | Back alignment and domain information |
|---|
Probab=99.57 E-value=1.8e-15 Score=152.55 Aligned_cols=157 Identities=17% Similarity=0.195 Sum_probs=100.3
Q ss_pred ccccccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCcc--------------------------ch----
Q 042823 15 GKAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKM--------------------------RL---- 64 (477)
Q Consensus 15 ~~~~~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~--------------------------~~---- 64 (477)
+.+.+.+-..|.. ++||+|++|.||+|+.+.+|+.||||++...... +.
T Consensus 112 G~~~~~~F~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v 190 (537)
T PRK04750 112 GGPVEEWFDDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVV 190 (537)
T ss_pred CCCHHHHHHhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHH
Confidence 4455666667777 8999999999999999888999999998643110 00
Q ss_pred -hhHHH------HHHHHHHHHhcc---CCCCeeEEEEEE-EeCCeEEEEEeccCCCchHHH--HHHcC----CCCHHHHH
Q 042823 65 -AENDM------IRREIQIRLYLS---GQPNVVEFKSTY-EDETAVHVVMELCEGGDLFDR--IIAKG----YNSERDAA 127 (477)
Q Consensus 65 -~~~~~------~~~e~~~~~~l~---~hpniv~~~~~~-~~~~~~~lv~e~~~gg~L~~~--l~~~~----~~~~~~~~ 127 (477)
..... +.+|.....++. .+.+.+.+-.+| +.....+|||||+.|+.+.+. +...+ .+.+..+.
T Consensus 191 ~e~~~~l~~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~ 270 (537)
T PRK04750 191 AEFEKTLHDELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVE 270 (537)
T ss_pred HHHHHHHHHhhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHH
Confidence 01112 233443333332 133333332333 224456799999999999764 33333 23444444
Q ss_pred HHHHHHHHHHHHHHHcCCeeccCCCCceeeeecC-CCCCEEEeecCCccccCC
Q 042823 128 TVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRD-DNALLKVTDFGSALLFEE 179 (477)
Q Consensus 128 ~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~-~~~~~kl~Dfg~a~~~~~ 179 (477)
.++.|++ ..|++|+|+||.||++..++ ..+.++++|||++...++
T Consensus 271 ~~~~Qif-------~~GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~~ 316 (537)
T PRK04750 271 VFFTQVF-------RDGFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLNK 316 (537)
T ss_pred HHHHHHH-------hCCeeeCCCChHHeEEecCCCCCCeEEEEecceEEECCH
Confidence 4555554 59999999999999993221 123899999999876643
|
|
| >KOG0031 consensus Myosin regulatory light chain, EF-Hand protein superfamily [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=99.57 E-value=2.1e-14 Score=115.04 Aligned_cols=92 Identities=21% Similarity=0.374 Sum_probs=84.1
Q ss_pred hcCChHHHHHHHHHhhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhhhC-CCc
Q 042823 382 ENLPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIYK-LET 460 (477)
Q Consensus 382 ~~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~~~-~~~ 460 (477)
+.++..+++++++||.++|+|+||.|..++|+.+|.++|...++++++.|++++ .|.|+|.-|+.++..... .+.
T Consensus 24 amf~q~QIqEfKEAF~~mDqnrDG~IdkeDL~d~~aSlGk~~~d~elDaM~~Ea----~gPINft~FLTmfGekL~gtdp 99 (171)
T KOG0031|consen 24 AMFDQSQIQEFKEAFNLMDQNRDGFIDKEDLRDMLASLGKIASDEELDAMMKEA----PGPINFTVFLTMFGEKLNGTDP 99 (171)
T ss_pred HHhhHHHHHHHHHHHHHHhccCCCcccHHHHHHHHHHcCCCCCHHHHHHHHHhC----CCCeeHHHHHHHHHHHhcCCCH
Confidence 345678999999999999999999999999999999999999999999999876 589999999999987666 566
Q ss_pred HHHHHHHHHHhccCCCC
Q 042823 461 PELLEKAFQYLDKNSDQ 477 (477)
Q Consensus 461 ~~~l~~aF~~~D~d~~G 477 (477)
++.+..||+.||.+++|
T Consensus 100 e~~I~~AF~~FD~~~~G 116 (171)
T KOG0031|consen 100 EEVILNAFKTFDDEGSG 116 (171)
T ss_pred HHHHHHHHHhcCccCCC
Confidence 78899999999999988
|
|
| >KOG0028 consensus Ca2+-binding protein (centrin/caltractin), EF-Hand superfamily protein [Cytoskeleton; Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.57 E-value=1.8e-14 Score=116.45 Aligned_cols=94 Identities=28% Similarity=0.437 Sum_probs=87.7
Q ss_pred CChHHHHHHHHHhhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhhhC-CCcHH
Q 042823 384 LPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIYK-LETPE 462 (477)
Q Consensus 384 ~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~~~-~~~~~ 462 (477)
+..++.++++.+|..||.+++|+|+.+||+.+++++|..+..++|.+++..+|.++.|.|+|++|...|..+.. .++.+
T Consensus 27 l~~~q~q~i~e~f~lfd~~~~g~iD~~EL~vAmralGFE~~k~ei~kll~d~dk~~~g~i~fe~f~~~mt~k~~e~dt~e 106 (172)
T KOG0028|consen 27 LTEEQKQEIKEAFELFDPDMAGKIDVEELKVAMRALGFEPKKEEILKLLADVDKEGSGKITFEDFRRVMTVKLGERDTKE 106 (172)
T ss_pred ccHHHHhhHHHHHHhhccCCCCcccHHHHHHHHHHcCCCcchHHHHHHHHhhhhccCceechHHHHHHHHHHHhccCcHH
Confidence 45677889999999999999999999999999999999999999999999999999999999999999886544 67889
Q ss_pred HHHHHHHHhccCCCC
Q 042823 463 LLEKAFQYLDKNSDQ 477 (477)
Q Consensus 463 ~l~~aF~~~D~d~~G 477 (477)
++..||+.||-|++|
T Consensus 107 Ei~~afrl~D~D~~G 121 (172)
T KOG0028|consen 107 EIKKAFRLFDDDKTG 121 (172)
T ss_pred HHHHHHHcccccCCC
Confidence 999999999999998
|
|
| >TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase | Back alignment and domain information |
|---|
Probab=99.54 E-value=3.8e-14 Score=141.43 Aligned_cols=144 Identities=17% Similarity=0.141 Sum_probs=96.5
Q ss_pred cccccccCCeEEEEEEEccCCceEEEEEeecCCccchh-------------------------------h------HHHH
Q 042823 28 GRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLA-------------------------------E------NDMI 70 (477)
Q Consensus 28 ~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~-------------------------------~------~~~~ 70 (477)
.++||+|++|.||+|+.+ +|+.||||+.......... . .-.+
T Consensus 122 ~~plasaSigQVh~A~l~-~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf 200 (437)
T TIGR01982 122 EKPLAAASIAQVHRARLV-DGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDL 200 (437)
T ss_pred CcceeeeehhheEEEEec-CCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCH
Confidence 368999999999999875 7899999997543110000 0 0013
Q ss_pred HHHHHHHHhcc----CCCCeeEEEEEEEeCCeEEEEEeccCCCchHHHHHHc-CCCCHHHHHHHHHHHHH-HHHHHHHcC
Q 042823 71 RREIQIRLYLS----GQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAK-GYNSERDAATVLRAIVN-AVNVCHSMG 144 (477)
Q Consensus 71 ~~e~~~~~~l~----~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~-~~~~~~~~~~i~~qil~-~L~~lH~~~ 144 (477)
.+|.+.+.++. ++|++.-..-++......++||||++|++|.+..... .... ...++.+++. .+..+|..|
T Consensus 201 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~~~~~---~~~ia~~~~~~~l~ql~~~g 277 (437)
T TIGR01982 201 RREAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDEAGLD---RKALAENLARSFLNQVLRDG 277 (437)
T ss_pred HHHHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHhcCCC---HHHHHHHHHHHHHHHHHhCC
Confidence 34444444432 3455433222333344568999999999998876532 1122 2345555555 467899999
Q ss_pred CeeccCCCCceeeeecCCCCCEEEeecCCccccC
Q 042823 145 VMHRDLKPENFSFISRDDNALLKVTDFGSALLFE 178 (477)
Q Consensus 145 ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~ 178 (477)
++|+|+||.||++ ..++.++++|||++....
T Consensus 278 ~~H~D~hPgNilv---~~~g~i~liDfG~~~~l~ 308 (437)
T TIGR01982 278 FFHADLHPGNIFV---LKDGKIIALDFGIVGRLS 308 (437)
T ss_pred ceeCCCCcccEEE---CCCCcEEEEeCCCeeECC
Confidence 9999999999999 677889999999987654
|
This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species. |
| >cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain | Back alignment and domain information |
|---|
Probab=99.54 E-value=1.6e-13 Score=120.36 Aligned_cols=143 Identities=12% Similarity=0.128 Sum_probs=103.7
Q ss_pred cccccccCCeEEEEEEEcc------CCceEEEEEeecCCc--------------c-----chhhHHHHH----HHHHHHH
Q 042823 28 GRMLGRGQFGVSYLCTENS------TNRPYACKSIAKKPK--------------M-----RLAENDMIR----REIQIRL 78 (477)
Q Consensus 28 ~~~iG~G~~g~V~~~~~~~------~~~~~aiK~~~~~~~--------------~-----~~~~~~~~~----~e~~~~~ 78 (477)
...||.|-=+.||.|.... .+..+|+|+.+.... . .......+. +|.+.+.
T Consensus 2 ~g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~ 81 (197)
T cd05146 2 NGCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLK 81 (197)
T ss_pred CCccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHH
Confidence 4579999999999997643 357899998753210 0 011233333 8999998
Q ss_pred hccCC-CCeeEEEEEEEeCCeEEEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHH-HHcCCeeccCCCCcee
Q 042823 79 YLSGQ-PNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVC-HSMGVMHRDLKPENFS 156 (477)
Q Consensus 79 ~l~~h-pniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~l-H~~~ivH~dlkp~Nil 156 (477)
++... -++++++++ ..-+|||||+.++.+..-..+...+++.++..+..+++.+|..| |+.|+|||||+|.||+
T Consensus 82 rl~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lkd~~~~~~~~~~i~~~i~~~l~~l~H~~glVHGDLs~~NIL 157 (197)
T cd05146 82 RMQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKLKDAKLNDEEMKNAYYQVLSMMKQLYKECNLVHADLSEYNML 157 (197)
T ss_pred HHHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhhhccccCHHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEE
Confidence 88643 567777765 34579999997754433223334466667788899999999998 8999999999999999
Q ss_pred eeecCCCCCEEEeecCCccccC
Q 042823 157 FISRDDNALLKVTDFGSALLFE 178 (477)
Q Consensus 157 ~~~~~~~~~~kl~Dfg~a~~~~ 178 (477)
+. .+.+.|+|||.+....
T Consensus 158 ~~----~~~v~iIDF~qav~~~ 175 (197)
T cd05146 158 WH----DGKVWFIDVSQSVEPT 175 (197)
T ss_pred EE----CCcEEEEECCCceeCC
Confidence 82 4679999999887654
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown. |
| >KOG1243 consensus Protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.51 E-value=2.3e-12 Score=128.13 Aligned_cols=184 Identities=15% Similarity=0.181 Sum_probs=132.0
Q ss_pred ccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEe
Q 042823 25 YFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVVME 104 (477)
Q Consensus 25 Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~lv~e 104 (477)
|.+ ...+-++.+..-.|..+.++.+|.|........ .......+-++-++.+ +||||+++++.++.++..|||+|
T Consensus 15 Y~l-e~~~~~~~a~~~~~t~k~~~~~vsVF~~~~~~~---~~~~~~~~A~k~lKtl-RHP~Il~yL~t~e~~~~~ylvTE 89 (690)
T KOG1243|consen 15 YDL-EETAFSSEALWPDGTRKADGGPVSVFVYKRSNG---EVTELAKRAVKRLKTL-RHPNILSYLDTTEEEGTLYLVTE 89 (690)
T ss_pred ccc-ccccCCCcccccccceeccCCceEEEEEeCCCc---hhhHHHHHHHHHhhhc-cCchhhhhhhhhcccCceEEEee
Confidence 444 333344443332466678899999998876543 2345567778888888 69999999999999999999999
Q ss_pred ccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH-HcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCCCcc-
Q 042823 105 LCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCH-SMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQV- 182 (477)
Q Consensus 105 ~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH-~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~- 182 (477)
-+. .|..++.+.+ ......-+.||+.||.||| ..+++|++|.-+.|++ +..|..||++|-.+........
T Consensus 90 rV~--Pl~~~lk~l~---~~~v~~Gl~qIl~AL~FL~~d~~lvHgNv~~~SVfV---n~~GeWkLggle~v~~~~~~~~~ 161 (690)
T KOG1243|consen 90 RVR--PLETVLKELG---KEEVCLGLFQILAALSFLNDDCNLVHGNVCKDSVFV---NESGEWKLGGLELVSKASGFNAP 161 (690)
T ss_pred ccc--cHHHHHHHhH---HHHHHHHHHHHHHHHHHHhccCCeeeccEeeeeEEE---cCCCcEEEeeeEEEeccccCCcc
Confidence 984 5666776654 6667778899999999997 6689999999999999 8899999999987754432211
Q ss_pred eecccccccccchhhhhhhcCCccchHhHHHHHHHHhhCC
Q 042823 183 YRDIVGSGFYIAPEVLRRRYGKEIDIWSAGVILYILLSGV 222 (477)
Q Consensus 183 ~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~l~tg~ 222 (477)
.....---.|..|+.+... +-..|.|-|||++++++.|.
T Consensus 162 ~~~~~~~~s~~~P~~~~~s-~~s~D~~~Lg~li~el~ng~ 200 (690)
T KOG1243|consen 162 AKSLYLIESFDDPEEIDPS-EWSIDSWGLGCLIEELFNGS 200 (690)
T ss_pred cccchhhhcccChhhcCcc-ccchhhhhHHHHHHHHhCcc
Confidence 0001111124455433211 13469999999999999993
|
|
| >KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.49 E-value=1.5e-14 Score=142.23 Aligned_cols=253 Identities=20% Similarity=0.212 Sum_probs=187.7
Q ss_pred ccccccccccccccccCCeEEEEEEEc-cCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCC
Q 042823 19 EDVMLHYFFGRMLGRGQFGVSYLCTEN-STNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDET 97 (477)
Q Consensus 19 ~~~~~~Y~~~~~iG~G~~g~V~~~~~~-~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~ 97 (477)
-....++..+..||.|.|+.|+.+... .++..|++|.+.+...... ....-..|+.+...+.-|.++++.+..|....
T Consensus 261 s~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~-~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r 339 (524)
T KOG0601|consen 261 SCKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFA-SDIFSLGEVILEAILGSHLPSVGKNSSWSQLR 339 (524)
T ss_pred eeecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchH-hhhcchhhhhHhhHhhcccccCCCCCCccccc
Confidence 345567888999999999999998755 6788999998765433222 22223356667677778999999999999999
Q ss_pred eEEEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCcccc
Q 042823 98 AVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLF 177 (477)
Q Consensus 98 ~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~ 177 (477)
..|+-.|||+|+++...+.-...+.+...+.+..|++.++.++|+..++|+|+||+||++...+ +..++.|||+.+.+
T Consensus 340 ~~~ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l~~i~s~~~~~~d~~psni~i~~~~--~~~~~~~~~~~t~~ 417 (524)
T KOG0601|consen 340 QGYIPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTALNVIHSKLFVHLDVKPSNILISNDG--FFSKLGDFGCWTRL 417 (524)
T ss_pred cccCchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhccccccchhhhcccccccceeeccch--hhhhcccccccccc
Confidence 9999999999999887776666788889999999999999999999999999999999884322 78899999988642
Q ss_pred CCCcceeccccccccc-chhhhhh--hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCCCCH
Q 042823 178 EEGQVYRDIVGSGFYI-APEVLRR--RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISS 254 (477)
Q Consensus 178 ~~~~~~~~~~gt~~y~-aPE~~~~--~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 254 (477)
.-.. ......-.+. .+|++.. .+..++|++|||..+.+..+|.+.-+.. .....+..+..... +..+.
T Consensus 418 ~~~~--~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~~---~~~~~i~~~~~p~~----~~~~~ 488 (524)
T KOG0601|consen 418 AFSS--GVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSESG---VQSLTIRSGDTPNL----PGLKL 488 (524)
T ss_pred ceec--ccccccccccccchhhccccccccccccccccccccccccCcccCccc---ccceeeecccccCC----CchHH
Confidence 2111 1112233344 3555543 4678999999999999999886543221 12233344433222 34457
Q ss_pred HHHHHHHHhcccCccccCCHHHHhcCccc
Q 042823 255 TAKDLVRRMLTKDPKRRITAAQVLEHPWL 283 (477)
Q Consensus 255 ~~~~li~~~l~~dp~~R~s~~~~l~h~~~ 283 (477)
++..+.+.++..++..||.+.++..|.-|
T Consensus 489 ~~q~~~kv~~~~~~~~~~l~~~l~~~~~~ 517 (524)
T KOG0601|consen 489 QLQVLLKVMINPDRKRRPSAVELSLHSEF 517 (524)
T ss_pred hhhhhhhhhcCCccccchhhhhhcccchh
Confidence 88889999999999999999999887654
|
|
| >cd05151 ChoK Choline Kinase (ChoK) | Back alignment and domain information |
|---|
Probab=99.47 E-value=2.7e-13 Score=118.45 Aligned_cols=129 Identities=19% Similarity=0.162 Sum_probs=95.0
Q ss_pred cccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEeccC
Q 042823 28 GRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVVMELCE 107 (477)
Q Consensus 28 ~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~lv~e~~~ 107 (477)
+++|+.|.++.||++... +..|++|+...... ......+|+.++..+.+...+++++.... ...++|||+++
T Consensus 3 ~~~l~~G~~~~vy~~~~~--~~~~~lK~~~~~~~----~~~~~~~E~~~l~~l~~~~~~P~~~~~~~--~~~~lv~e~i~ 74 (170)
T cd05151 3 ISPLKGGMTNKNYRVEVA--NKKYVVRIPGNGTE----LLINRENEAENSKLAAEAGIGPKLYYFDP--ETGVLITEFIE 74 (170)
T ss_pred eeecCCcccCceEEEEEC--CeEEEEEeCCCCcc----cccCHHHHHHHHHHHHHhCCCCceEEEeC--CCCeEEEEecC
Confidence 467899999999998863 77899998754321 12235678888888754444556665543 33479999999
Q ss_pred CCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCC-----eeccCCCCceeeeecCCCCCEEEeecCCccc
Q 042823 108 GGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGV-----MHRDLKPENFSFISRDDNALLKVTDFGSALL 176 (477)
Q Consensus 108 gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~i-----vH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~ 176 (477)
|.++.+. ......++.++..+|..||+.++ +|||++|.||++ + .+.++++|||.+..
T Consensus 75 G~~l~~~--------~~~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~---~-~~~~~liDf~~a~~ 136 (170)
T cd05151 75 GSELLTE--------DFSDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLL---D-DGRLWLIDWEYAGM 136 (170)
T ss_pred CCccccc--------cccCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEE---E-CCeEEEEecccccC
Confidence 9887543 11123457889999999999985 999999999998 3 45699999998764
|
The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph |
| >KOG0036 consensus Predicted mitochondrial carrier protein [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.46 E-value=1e-12 Score=122.15 Aligned_cols=133 Identities=23% Similarity=0.357 Sum_probs=119.0
Q ss_pred CchhhHHHHHHhhhcCCCCCCCccHHHHHHHHHhhCCC-CCHHHHHHHHHHhhccc----hHHHHHhcCChHHHHHHHHH
Q 042823 321 PDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSM-LTEFDVKHLMEAVKNSS----TLESLCENLPTKEKQKLMEK 395 (477)
Q Consensus 321 ~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~-~~~~~~~~~~~~~d~~~----~~~~~~~~~~~~~~~~l~~~ 395 (477)
.++...+++.+|..+|.+++|.++..++.+++.+++.. +...-...+++..|.+. ++.+|..++...+ .++.+.
T Consensus 9 ~~er~~r~~~lf~~lD~~~~g~~d~~~l~k~~~~l~~~~~~~~~~~~l~~~~d~~~dg~vDy~eF~~Y~~~~E-~~l~~~ 87 (463)
T KOG0036|consen 9 DEERDIRIRCLFKELDSKNDGQVDLDQLEKGLEKLDHPKPNYEAAKMLFSAMDANRDGRVDYSEFKRYLDNKE-LELYRI 87 (463)
T ss_pred cHHHHHHHHHHHHHhccCCCCceeHHHHHHHHHhcCCCCCchHHHHHHHHhcccCcCCcccHHHHHHHHHHhH-HHHHHH
Confidence 45566788999999999999999999999999999876 66667788899887543 6889988887654 488999
Q ss_pred hhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHh
Q 042823 396 FREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTD 454 (477)
Q Consensus 396 F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~ 454 (477)
|+..|.++||.|..+|+...|+.+|.++++++++.+++.+|+++++.|+++||...+.-
T Consensus 88 F~~iD~~hdG~i~~~Ei~~~l~~~gi~l~de~~~k~~e~~d~~g~~~I~~~e~rd~~ll 146 (463)
T KOG0036|consen 88 FQSIDLEHDGKIDPNEIWRYLKDLGIQLSDEKAAKFFEHMDKDGKATIDLEEWRDHLLL 146 (463)
T ss_pred HhhhccccCCccCHHHHHHHHHHhCCccCHHHHHHHHHHhccCCCeeeccHHHHhhhhc
Confidence 99999999999999999999999999999999999999999999999999999998764
|
|
| >KOG0034 consensus Ca2+/calmodulin-dependent protein phosphatase (calcineurin subunit B), EF-Hand superfamily protein [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.43 E-value=2.4e-12 Score=111.22 Aligned_cols=137 Identities=22% Similarity=0.332 Sum_probs=105.7
Q ss_pred ccCCchhhHHHHHHhhhcCCC-CCCCccHHHHHHHHHhhCCCCCHHHHHHHHHH-hhcc-chHHHHHhcCC-----hHHH
Q 042823 318 EYLPDEETQALKEKFIEMDTD-KNGTLSYDELRAGLTKVGSMLTEFDVKHLMEA-VKNS-STLESLCENLP-----TKEK 389 (477)
Q Consensus 318 ~~~~~~~~~~l~~~F~~~D~~-~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~-~d~~-~~~~~~~~~~~-----~~~~ 389 (477)
..++.+++..+...|..+|.+ ++|.++.+||..+. .+..+|-...+-..+.. .++. .+|++|+..++ ....
T Consensus 25 ~~fs~~EI~~L~~rF~kl~~~~~~g~lt~eef~~i~-~~~~Np~~~rI~~~f~~~~~~~~v~F~~Fv~~ls~f~~~~~~~ 103 (187)
T KOG0034|consen 25 TQFSANEIERLYERFKKLDRNNGDGYLTKEEFLSIP-ELALNPLADRIIDRFDTDGNGDPVDFEEFVRLLSVFSPKASKR 103 (187)
T ss_pred cccCHHHHHHHHHHHHHhccccccCccCHHHHHHHH-HHhcCcHHHHHHHHHhccCCCCccCHHHHHHHHhhhcCCccHH
Confidence 346788999999999999999 99999999998877 55555544444443332 2233 56787777553 2234
Q ss_pred HHHHHHhhhhcCCCCCCcCHHHHHHHHHHc-CCCCC--HHH----HHHHHHHhcCCCCCcccHHHHHHHHHhh
Q 042823 390 QKLMEKFREMDTDNSDTLTLSELKAGLAKL-GSALE--ESE----VNQYMEAGDIDGNGNIDSIEFVNLMTDI 455 (477)
Q Consensus 390 ~~l~~~F~~~D~~~~G~I~~~el~~~l~~~-g~~~~--~~~----i~~~~~~~d~~~~g~i~~~eF~~~~~~~ 455 (477)
++++-||++||.+++|+|+.+|+..++..+ |...+ ++. ++.++.++|.++||.|+|+||..++.+.
T Consensus 104 ~Kl~faF~vYD~~~~G~I~reel~~iv~~~~~~~~~~~~e~~~~i~d~t~~e~D~d~DG~IsfeEf~~~v~~~ 176 (187)
T KOG0034|consen 104 EKLRFAFRVYDLDGDGFISREELKQILRMMVGENDDMSDEQLEDIVDKTFEEADTDGDGKISFEEFCKVVEKQ 176 (187)
T ss_pred HHHHHHHHHhcCCCCCcCcHHHHHHHHHHHHccCCcchHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHcC
Confidence 689999999999999999999999999884 55555 444 4667789999999999999999998754
|
|
| >KOG0030 consensus Myosin essential light chain, EF-Hand protein superfamily [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=99.41 E-value=1e-12 Score=103.67 Aligned_cols=93 Identities=18% Similarity=0.235 Sum_probs=83.6
Q ss_pred ChHHHHHHHHHhhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCC--CCCcccHHHHHHHHHhhhC---CC
Q 042823 385 PTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDID--GNGNIDSIEFVNLMTDIYK---LE 459 (477)
Q Consensus 385 ~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~--~~g~i~~~eF~~~~~~~~~---~~ 459 (477)
+.++..+++++|..||..+||.|+..+...+||++|.+||++++.+.+.+.+.+ +--+|+|++|+.++..... ..
T Consensus 6 ~~d~~~e~ke~F~lfD~~gD~ki~~~q~gdvlRalG~nPT~aeV~k~l~~~~~~~~~~~rl~FE~fLpm~q~vaknk~q~ 85 (152)
T KOG0030|consen 6 TPDQMEEFKEAFLLFDRTGDGKISGSQVGDVLRALGQNPTNAEVLKVLGQPKRREMNVKRLDFEEFLPMYQQVAKNKDQG 85 (152)
T ss_pred CcchHHHHHHHHHHHhccCcccccHHHHHHHHHHhcCCCcHHHHHHHHcCcccchhhhhhhhHHHHHHHHHHHHhccccC
Confidence 456678999999999999999999999999999999999999999999988876 4578999999999986544 45
Q ss_pred cHHHHHHHHHHhccCCCC
Q 042823 460 TPELLEKAFQYLDKNSDQ 477 (477)
Q Consensus 460 ~~~~l~~aF~~~D~d~~G 477 (477)
+.++..+..++||++|+|
T Consensus 86 t~edfvegLrvFDkeg~G 103 (152)
T KOG0030|consen 86 TYEDFVEGLRVFDKEGNG 103 (152)
T ss_pred cHHHHHHHHHhhcccCCc
Confidence 678999999999999998
|
|
| >cd05022 S-100A13 S-100A13: S-100A13 domain found in proteins similar to S100A13 | Back alignment and domain information |
|---|
Probab=99.40 E-value=1e-12 Score=99.41 Aligned_cols=68 Identities=21% Similarity=0.381 Sum_probs=63.5
Q ss_pred HHHHHHHHhhhhcC-CCCCCcCHHHHHHHHHH-cCCCCCH-HHHHHHHHHhcCCCCCcccHHHHHHHHHhh
Q 042823 388 EKQKLMEKFREMDT-DNSDTLTLSELKAGLAK-LGSALEE-SEVNQYMEAGDIDGNGNIDSIEFVNLMTDI 455 (477)
Q Consensus 388 ~~~~l~~~F~~~D~-~~~G~I~~~el~~~l~~-~g~~~~~-~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~ 455 (477)
-+..++.+|+.||+ +++|+|+.+||+.+|+. +|..+++ ++++++++.+|.|+||.|+|+||+.+|...
T Consensus 6 ai~~l~~~F~~fd~~~~~g~i~~~ELk~ll~~elg~~ls~~~~v~~mi~~~D~d~DG~I~F~EF~~l~~~l 76 (89)
T cd05022 6 AIETLVSNFHKASVKGGKESLTASEFQELLTQQLPHLLKDVEGLEEKMKNLDVNQDSKLSFEEFWELIGEL 76 (89)
T ss_pred HHHHHHHHHHHHhCCCCCCeECHHHHHHHHHHHhhhhccCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHH
Confidence 35688999999999 99999999999999999 9988888 999999999999999999999999998753
|
S100A13 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A13 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100A13 is involved in the cellular export of interleukin-1 (IL-1) and of fibroblast growth factor-1 (FGF-1), which plays an important role in angiogenesis and tissue regeneration. Export is based on the CuII-dependent formation of multiprotein complexes containing the S100A13 protein. Assembly of these complexes occurs near the inner surface of the plasma membrane. Binding of two Ca(II) ions per monomer triggers key conformational changes leading to the creation of two identical and symmetrical Cu(II)-binding sites on the surface of the protein, close to the interface between the two monomers. These Cu |
| >PTZ00183 centrin; Provisional | Back alignment and domain information |
|---|
Probab=99.37 E-value=6.3e-12 Score=108.33 Aligned_cols=94 Identities=33% Similarity=0.507 Sum_probs=71.8
Q ss_pred CChHHHHHHHHHhhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhhh-CCCcHH
Q 042823 384 LPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIY-KLETPE 462 (477)
Q Consensus 384 ~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~~-~~~~~~ 462 (477)
++..+++++..+|..+|.+++|.|+.+||..+++.+|..++..++..++..+|.+++|.|+|+||+.++.... .....+
T Consensus 11 ~~~~~~~~~~~~F~~~D~~~~G~i~~~e~~~~l~~~g~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~ 90 (158)
T PTZ00183 11 LTEDQKKEIREAFDLFDTDGSGTIDPKELKVAMRSLGFEPKKEEIKQMIADVDKDGSGKIDFEEFLDIMTKKLGERDPRE 90 (158)
T ss_pred CCHHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHHhcCCCcHH
Confidence 4556677788888888888888888888888888888777777888888888888888888888887765432 234456
Q ss_pred HHHHHHHHhccCCCC
Q 042823 463 LLEKAFQYLDKNSDQ 477 (477)
Q Consensus 463 ~l~~aF~~~D~d~~G 477 (477)
.+..+|+.+|++++|
T Consensus 91 ~l~~~F~~~D~~~~G 105 (158)
T PTZ00183 91 EILKAFRLFDDDKTG 105 (158)
T ss_pred HHHHHHHHhCCCCCC
Confidence 777888888888776
|
|
| >COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.36 E-value=1.7e-11 Score=103.76 Aligned_cols=135 Identities=23% Similarity=0.240 Sum_probs=97.1
Q ss_pred ccccccCCeEEEEEEEccCCceEEEEEeecCCccchh-----hHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEE
Q 042823 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLA-----ENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVVM 103 (477)
Q Consensus 29 ~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~-----~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~lv~ 103 (477)
..+++|+-+.+|.+.+ -|..+++|.=..+.-..+. ...+..+|.+++..+. --.|...+=+..+.....|+|
T Consensus 2 ~~i~~GAEa~i~~~~~--~g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~-~~GV~~P~v~dvD~~~~~I~m 78 (204)
T COG3642 2 DLIKQGAEAIIYLTDF--LGLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAR-EAGVPVPIVYDVDPDNGLIVM 78 (204)
T ss_pred chhhCCcceeEEeeec--cCcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHH-HcCCCCCeEEEEcCCCCEEEE
Confidence 4688999999999866 3455677753322222211 2234567888888874 334444444555666778999
Q ss_pred eccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCcccc
Q 042823 104 ELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLF 177 (477)
Q Consensus 104 e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~ 177 (477)
||++|-.|.+.+... ...+++.+-.-+.-||..||||+||.++||++ ..+.+.++|||++...
T Consensus 79 e~I~G~~lkd~l~~~-------~~~~~r~vG~~vg~lH~~givHGDLTtsNiIl----~~~~i~~IDfGLg~~s 141 (204)
T COG3642 79 EYIEGELLKDALEEA-------RPDLLREVGRLVGKLHKAGIVHGDLTTSNIIL----SGGRIYFIDFGLGEFS 141 (204)
T ss_pred EEeCChhHHHHHHhc-------chHHHHHHHHHHHHHHhcCeecCCCccceEEE----eCCcEEEEECCccccc
Confidence 999998888788665 24567777778889999999999999999988 3344999999999743
|
|
| >PTZ00184 calmodulin; Provisional | Back alignment and domain information |
|---|
Probab=99.36 E-value=5.2e-12 Score=107.67 Aligned_cols=95 Identities=31% Similarity=0.499 Sum_probs=81.8
Q ss_pred cCChHHHHHHHHHhhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhhhC-CCcH
Q 042823 383 NLPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIYK-LETP 461 (477)
Q Consensus 383 ~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~~~-~~~~ 461 (477)
.++.++.+.++..|..+|.+++|.|+.+||..++..+|..++.+++..+++.+|.+++|.|+|++|+.++..... ....
T Consensus 4 ~~~~~~~~~~~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~l~~~~~~~~~~ 83 (149)
T PTZ00184 4 QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTLMARKMKDTDSE 83 (149)
T ss_pred ccCHHHHHHHHHHHHHHcCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHhcCcCCCCcCcHHHHHHHHHHhccCCcHH
Confidence 456677888999999999999999999999999998998888889999999999999999999999998875543 3445
Q ss_pred HHHHHHHHHhccCCCC
Q 042823 462 ELLEKAFQYLDKNSDQ 477 (477)
Q Consensus 462 ~~l~~aF~~~D~d~~G 477 (477)
+.+..+|+.||+|++|
T Consensus 84 ~~~~~~F~~~D~~~~g 99 (149)
T PTZ00184 84 EEIKEAFKVFDRDGNG 99 (149)
T ss_pred HHHHHHHHhhCCCCCC
Confidence 6788999999999987
|
|
| >cd05027 S-100B S-100B: S-100B domain found in proteins similar to S100B | Back alignment and domain information |
|---|
Probab=99.32 E-value=7.6e-12 Score=94.98 Aligned_cols=66 Identities=29% Similarity=0.414 Sum_probs=62.1
Q ss_pred HHHHHHHhhhhc-CCCCC-CcCHHHHHHHHHH-----cCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHh
Q 042823 389 KQKLMEKFREMD-TDNSD-TLTLSELKAGLAK-----LGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTD 454 (477)
Q Consensus 389 ~~~l~~~F~~~D-~~~~G-~I~~~el~~~l~~-----~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~ 454 (477)
+..++++|+.|| +|++| .|+.+||+.+|+. +|..+++++++++++.+|.|++|.|+|+||+.++..
T Consensus 7 ~~~l~~aF~~fD~~dgdG~~I~~~eL~~ll~~~~~~~lg~~~~~~~v~~~i~~~D~n~dG~v~f~eF~~li~~ 79 (88)
T cd05027 7 MVALIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSDGDGECDFQEFMAFVAM 79 (88)
T ss_pred HHHHHHHHHHhcccCCCcCEECHHHHHHHHHHHhHHHhcCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence 568899999998 89999 5999999999999 999999999999999999999999999999998875
|
S100B is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100B group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100B is most abundant in glial cells of the central nervous system, predominately in astrocytes. S100B is involved in signal transduction via the inhibition of protein phoshorylation, regulation of enzyme activity and by affecting the calcium homeostasis. Upon calcium binding the S100B homodimer changes conformation to expose a hydrophobic cleft, which represents the interaction site of S100B with its more than 20 known target proteins. These target proteins include several cellular architecture proteins such as tubulin and GFAP; S100B can inhibit polymerization of these oligomeric molecules. Furthermore, S100B i |
| >KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.32 E-value=1.3e-10 Score=112.35 Aligned_cols=211 Identities=16% Similarity=0.225 Sum_probs=152.5
Q ss_pred CeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEE----eCCeEEEEEeccCC-Cc
Q 042823 36 FGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYE----DETAVHVVMELCEG-GD 110 (477)
Q Consensus 36 ~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~----~~~~~~lv~e~~~g-g~ 110 (477)
..+.|+|..+.+|..|++|++.-.... .....-.-+++++++ .|+|||++.++|. .+..+++|++|.++ ++
T Consensus 289 ~~Ttyk~~s~~DG~~YvLkRlhg~r~~---~~nk~t~lve~wkkl-~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~T 364 (655)
T KOG3741|consen 289 SITTYKATSNVDGNAYVLKRLHGDRDQ---STNKDTSLVEAWKKL-CHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPT 364 (655)
T ss_pred cceeEeeeeccCCceeeeeeecccccc---CcccchHHHHHHHHh-ccCceeehhhhhhhhccCcceEEEEEecCCCCch
Confidence 468899999999999999998322111 111122345667788 6999999999986 34568999999987 57
Q ss_pred hHHHHHH---------------cCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCcc
Q 042823 111 LFDRIIA---------------KGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSAL 175 (477)
Q Consensus 111 L~~~l~~---------------~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~ 175 (477)
|.++.-. +...+|..+|.++.|+..||.++|+.|+.-+-|.|.+|++ ....+++|...|...
T Consensus 365 L~d~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHssGLAck~L~~~kIlv---~G~~RIriS~C~i~D 441 (655)
T KOG3741|consen 365 LYDLYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSSGLACKTLDLKKILV---TGKMRIRISGCGIMD 441 (655)
T ss_pred HHHHHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhcCceeecccHhHeEe---eCcceEEEeccccee
Confidence 8776532 2345889999999999999999999999999999999999 555578887777665
Q ss_pred ccCCCcceecccccccccchhhhhhhcCCccchHhHHHHHHHHhhCCCCCCCCCh-hhH-HHHHHcCCccCCCCCCCCCC
Q 042823 176 LFEEGQVYRDIVGSGFYIAPEVLRRRYGKEIDIWSAGVILYILLSGVPPFWAETK-KGT-YDAILQGEIDFDTDPWPSIS 253 (477)
Q Consensus 176 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~l~tg~~pf~~~~~-~~~-~~~i~~~~~~~~~~~~~~~~ 253 (477)
...+.+ .+| +.+ -.+-|.=.||.++..|.||..--+.... .+. +..| .+.+|
T Consensus 442 vl~~d~-----------~~~--le~--~Qq~D~~~lG~ll~aLAt~~~ns~~~d~~~~s~~~~I-----------~~~yS 495 (655)
T KOG3741|consen 442 VLQEDP-----------TEP--LES--QQQNDLRDLGLLLLALATGTENSNRTDSTQSSHLTRI-----------TTTYS 495 (655)
T ss_pred eecCCC-----------Ccc--hhH--HhhhhHHHHHHHHHHHhhcccccccccchHHHHHHHh-----------hhhhh
Confidence 544332 111 111 1255888999999999999654222111 111 1221 14678
Q ss_pred HHHHHHHHHhcccCccccCCHHHHhcC
Q 042823 254 STAKDLVRRMLTKDPKRRITAAQVLEH 280 (477)
Q Consensus 254 ~~~~~li~~~l~~dp~~R~s~~~~l~h 280 (477)
.+++++|.-+...++++ -++.+++.+
T Consensus 496 ~D~rn~v~yl~s~~~~~-ksI~~llp~ 521 (655)
T KOG3741|consen 496 TDLRNVVEYLESLNFRE-KSIQDLLPM 521 (655)
T ss_pred HHHHHHHHHHHhcCccc-ccHHHHHHH
Confidence 99999999999999987 788888865
|
|
| >PF13499 EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A 1TN4_A 1A2X_A 2CT9_B 2OTG_B 2OS8_B 1SNL_A 3O4Y_A 3J04_E | Back alignment and domain information |
|---|
Probab=99.30 E-value=6.2e-12 Score=90.86 Aligned_cols=62 Identities=34% Similarity=0.619 Sum_probs=55.0
Q ss_pred HHHHHhhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHH----HHHHHHHhcCCCCCcccHHHHHHHH
Q 042823 391 KLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESE----VNQYMEAGDIDGNGNIDSIEFVNLM 452 (477)
Q Consensus 391 ~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~----i~~~~~~~d~~~~g~i~~~eF~~~~ 452 (477)
+++++|+.+|.|++|+|+.+||+.++..++...++.+ ++.+++.+|.|+||.|+|+||+.+|
T Consensus 1 ~l~~~F~~~D~d~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~i~~~Ef~~~~ 66 (66)
T PF13499_consen 1 RLKEAFKKFDKDGDGYISKEELRRALKHLGRDMSDEESDEMIDQIFREFDTDGDGRISFDEFLNFM 66 (66)
T ss_dssp HHHHHHHHHSTTSSSEEEHHHHHHHHHHTTSHSTHHHHHHHHHHHHHHHTTTSSSSEEHHHHHHHH
T ss_pred CHHHHHHHHcCCccCCCCHHHHHHHHHHhcccccHHHHHHHHHHHHHHhCCCCcCCCcHHHHhccC
Confidence 4789999999999999999999999999997665544 5556999999999999999999875
|
... |
| >KOG3087 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.28 E-value=6.3e-11 Score=99.82 Aligned_cols=148 Identities=15% Similarity=0.133 Sum_probs=107.3
Q ss_pred ccccccccCCeEEEEEEEccCCceEEEEEeecCCcc-----chhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEE
Q 042823 27 FGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKM-----RLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHV 101 (477)
Q Consensus 27 ~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~-----~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~l 101 (477)
...+|-+|+-+.|+++.+ .|+...||.=..+... ..-...+..+|.+++.++. --.|.-..=++.+...-.|
T Consensus 11 ~l~likQGAEArv~~~~~--~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~-~~GI~~P~l~~~D~~~~~i 87 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSF--SGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCR-ALGIPAPRLIFIDTYGGQI 87 (229)
T ss_pred cceeeeccceeeEeeecc--CCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHH-HhCCCCceEEEEecCCCeE
Confidence 456788999999999886 5777788743221111 1123456678888888874 3344444445666666679
Q ss_pred EEeccCC-CchHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCcccc
Q 042823 102 VMELCEG-GDLFDRIIAKGY--NSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLF 177 (477)
Q Consensus 102 v~e~~~g-g~L~~~l~~~~~--~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~ 177 (477)
+|||++| .++.+++..... ....-...++++|-+.+.-||.++|+||||..+||++...+....+.++|||++...
T Consensus 88 ~ME~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH~ndiiHGDLTTSNill~~~~~~~~~~lIdfgls~~s 166 (229)
T KOG3087|consen 88 YMEFIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLHDNDIIHGDLTTSNILLRSDGNQITPILIDFGLSSVS 166 (229)
T ss_pred EEEeccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhhhCCeecccccccceEEecCCCcCceEEEeecchhcc
Confidence 9999987 477788776432 222333688999999999999999999999999999987777777899999988643
|
|
| >PLN02964 phosphatidylserine decarboxylase | Back alignment and domain information |
|---|
Probab=99.27 E-value=2.2e-11 Score=123.86 Aligned_cols=90 Identities=22% Similarity=0.310 Sum_probs=81.3
Q ss_pred CChHHHHHHHHHhhhhcCCCCCCcCHHHHHHHHHHcC-CCCCHHH---HHHHHHHhcCCCCCcccHHHHHHHHHhhhCCC
Q 042823 384 LPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLG-SALEESE---VNQYMEAGDIDGNGNIDSIEFVNLMTDIYKLE 459 (477)
Q Consensus 384 ~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g-~~~~~~~---i~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~~ 459 (477)
+...+.++++++|+.||+|++|.| +..+++++| ..+++++ ++++++.+|.|++|.|+|+||+.++.......
T Consensus 137 f~~kqi~elkeaF~lfD~dgdG~i----Lg~ilrslG~~~pte~e~~fi~~mf~~~D~DgdG~IdfdEFl~lL~~lg~~~ 212 (644)
T PLN02964 137 FVTQEPESACESFDLLDPSSSNKV----VGSIFVSCSIEDPVETERSFARRILAIVDYDEDGQLSFSEFSDLIKAFGNLV 212 (644)
T ss_pred ccHHHHHHHHHHHHHHCCCCCCcC----HHHHHHHhCCCCCCHHHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHhccCC
Confidence 455677899999999999999997 999999999 5899887 89999999999999999999999998765567
Q ss_pred cHHHHHHHHHHhccCCCC
Q 042823 460 TPELLEKAFQYLDKNSDQ 477 (477)
Q Consensus 460 ~~~~l~~aF~~~D~d~~G 477 (477)
+++++.+||+.||+|++|
T Consensus 213 seEEL~eaFk~fDkDgdG 230 (644)
T PLN02964 213 AANKKEELFKAADLNGDG 230 (644)
T ss_pred CHHHHHHHHHHhCCCCCC
Confidence 788999999999999998
|
|
| >cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins | Back alignment and domain information |
|---|
Probab=99.22 E-value=6.9e-11 Score=107.91 Aligned_cols=141 Identities=26% Similarity=0.331 Sum_probs=102.6
Q ss_pred ccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccC-CCCeeEEEEEEEeC---CeEEEEEe
Q 042823 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSG-QPNVVEFKSTYEDE---TAVHVVME 104 (477)
Q Consensus 29 ~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~-hpniv~~~~~~~~~---~~~~lv~e 104 (477)
++||.|..+.||++.... |..+++|........ .....+.+|..++..+.. +.++++++.+.... +..++|||
T Consensus 4 ~~l~~G~~n~~~~v~~~~-g~~~ilK~~~~~~~~--~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e 80 (223)
T cd05154 4 RQLSGGQSNLTYLLTAGG-GRRLVLRRPPPGALL--PSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVME 80 (223)
T ss_pred eecCCCccceEEEEEecC-CcceEEEeCCCcccC--cccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEE
Confidence 678999999999998643 578999987543321 124467889999888854 24467777776654 36789999
Q ss_pred ccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH------------------------------------------
Q 042823 105 LCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHS------------------------------------------ 142 (477)
Q Consensus 105 ~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~------------------------------------------ 142 (477)
|++|+++.+.+.. ..+++.....++.+++.+|..||+
T Consensus 81 ~i~G~~l~~~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (223)
T cd05154 81 RVDGRVLRDRLLR-PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAMER 159 (223)
T ss_pred EeCCEecCCCCCC-CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHHHH
Confidence 9999888665432 345666666777777777777773
Q ss_pred --------------cCCeeccCCCCceeeeecCC--CCCEEEeecCCccc
Q 042823 143 --------------MGVMHRDLKPENFSFISRDD--NALLKVTDFGSALL 176 (477)
Q Consensus 143 --------------~~ivH~dlkp~Nil~~~~~~--~~~~kl~Dfg~a~~ 176 (477)
..++|+|++|.||++ +. .+.+.|+||+.+..
T Consensus 160 ~~~~~~~~~~~~~~~~l~HgD~~~~Nil~---~~~~~~~~~iID~e~~~~ 206 (223)
T cd05154 160 LLRWLEAHLPADSRPGLVHGDYRLGNVLF---HPDEPRVVAVLDWELATL 206 (223)
T ss_pred HHHHHHhhCCCCCCcEEEECCCCcccEEE---cCCCCcEEEEEecccccc
Confidence 236999999999998 44 45689999997764
|
This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain |
| >smart00027 EH Eps15 homology domain | Back alignment and domain information |
|---|
Probab=99.19 E-value=1e-10 Score=91.24 Aligned_cols=70 Identities=30% Similarity=0.433 Sum_probs=64.5
Q ss_pred CChHHHHHHHHHhhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhh
Q 042823 384 LPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDI 455 (477)
Q Consensus 384 ~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~ 455 (477)
++.+++..++++|+.||.|++|.|+.+|++.+|+..| ++++++++++..+|.+++|.|+|+||+.++...
T Consensus 4 ls~~~~~~l~~~F~~~D~d~~G~Is~~el~~~l~~~~--~~~~ev~~i~~~~d~~~~g~I~~~eF~~~~~~~ 73 (96)
T smart00027 4 ISPEDKAKYEQIFRSLDKNQDGTVTGAQAKPILLKSG--LPQTLLAKIWNLADIDNDGELDKDEFALAMHLI 73 (96)
T ss_pred CCHHHHHHHHHHHHHhCCCCCCeEeHHHHHHHHHHcC--CCHHHHHHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence 5677889999999999999999999999999999976 688899999999999999999999999988653
|
Pair of EF hand motifs that recognise proteins containing Asn-Pro-Phe (NPF) sequences. |
| >cd05025 S-100A1 S-100A1: S-100A1 domain found in proteins similar to S100A1 | Back alignment and domain information |
|---|
Probab=99.17 E-value=1.6e-10 Score=89.39 Aligned_cols=67 Identities=27% Similarity=0.432 Sum_probs=59.9
Q ss_pred HHHHHHHhhhhc-CCCCCC-cCHHHHHHHHHH-cC----CCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhh
Q 042823 389 KQKLMEKFREMD-TDNSDT-LTLSELKAGLAK-LG----SALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDI 455 (477)
Q Consensus 389 ~~~l~~~F~~~D-~~~~G~-I~~~el~~~l~~-~g----~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~ 455 (477)
++.++++|+.|| ++++|+ |+.+||+.+|+. +| ..+++++++++++.+|.+++|.|+|+||+.++...
T Consensus 8 ~~~l~~~F~~fDd~dg~G~~Is~~El~~~l~~~lg~~~~~~~s~~~v~~i~~~~D~d~~G~I~f~eF~~l~~~~ 81 (92)
T cd05025 8 METLINVFHAHSGKEGDKYKLSKKELKDLLQTELSDFLDAQKDADAVDKIMKELDENGDGEVDFQEFVVLVAAL 81 (92)
T ss_pred HHHHHHHHHHHhcccCCCCeECHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHH
Confidence 467999999997 999994 999999999986 54 45789999999999999999999999999988754
|
S100A1 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. As is the case with many other members of S100 protein family, S100A1 is implicated in intracellular and extracellular regulatory activities, including interaction with myosin-associated twitchin kinase, actin-capping protein CapZ, sinapsin I, and tubulin. Structural data suggests that S100A1 proteins exist within cells as antiparallel homodimers, while heterodimers with S100A4 and S100B also has been reported. Upon binding calcium S100A1 changes conformation to expose a hydrophobic cleft which is the interaction site of S100A1 with its more that 20 known target proteins. |
| >cd05029 S-100A6 S-100A6: S-100A6 domain found in proteins similar to S100A6 | Back alignment and domain information |
|---|
Probab=99.16 E-value=1.6e-10 Score=87.71 Aligned_cols=68 Identities=24% Similarity=0.410 Sum_probs=61.5
Q ss_pred HHHHHHHHhhhhcC-CC-CCCcCHHHHHHHHH---HcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhh
Q 042823 388 EKQKLMEKFREMDT-DN-SDTLTLSELKAGLA---KLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDI 455 (477)
Q Consensus 388 ~~~~l~~~F~~~D~-~~-~G~I~~~el~~~l~---~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~ 455 (477)
.+..+-.+|..||. |+ +|+|+.+||+.+|+ .+|..+++++++++++.+|.|++|.|+|+||+.++...
T Consensus 8 ~~~~~i~~F~~y~~~~~~~g~Is~~EL~~~l~~~~~lg~k~t~~ev~~m~~~~D~d~dG~Idf~EFv~lm~~l 80 (88)
T cd05029 8 AIGLLVAIFHKYSGREGDKNTLSKKELKELIQKELTIGSKLQDAEIAKLMEDLDRNKDQEVNFQEYVTFLGAL 80 (88)
T ss_pred HHHHHHHHHHHHHccCCCCCEECHHHHHHHHHHHHhcCCCCCHHHHHHHHHHhcCCCCCCCcHHHHHHHHHHH
Confidence 35677889999998 77 89999999999996 37999999999999999999999999999999988753
|
S100A6 is a member of the S100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A6 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100A6 is normally expressed in the G1 phase of the cell cycle in neuronal cells. The function of S100A6 remains unclear, but evidence suggests that it is involved in cell cycle regulation and exocytosis. S100A6 may also be involved in tumorigenesis; the protein is overexpressed in several tumors. Ca2+ binding to S100A6 leads to a conformational change in the protein, which exposes a hydrophobic surface for interact |
| >cd05026 S-100Z S-100Z: S-100Z domain found in proteins similar to S100Z | Back alignment and domain information |
|---|
Probab=99.16 E-value=1.6e-10 Score=89.09 Aligned_cols=67 Identities=25% Similarity=0.364 Sum_probs=59.0
Q ss_pred HHHHHHHhhhhc-CCCCC-CcCHHHHHHHHHH-c----CCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhh
Q 042823 389 KQKLMEKFREMD-TDNSD-TLTLSELKAGLAK-L----GSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDI 455 (477)
Q Consensus 389 ~~~l~~~F~~~D-~~~~G-~I~~~el~~~l~~-~----g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~ 455 (477)
+..++++|..|| +|++| +|+.+||+.+|+. + +...++.+++++++++|.|+||.|+|+||+.++...
T Consensus 9 ~~~~~~~F~~~dd~dgdg~~Is~~EL~~ll~~~~~~~~~~~~~~~~v~~i~~elD~n~dG~Idf~EF~~l~~~l 82 (93)
T cd05026 9 MDTLIRIFHNYSGKEGDRYKLSKGELKELLQRELTDFLSSQKDPMLVDKIMNDLDSNKDNEVDFNEFVVLVAAL 82 (93)
T ss_pred HHHHHHHHHHHHccCCCCCEECHHHHHHHHHHHhHHhcccccCHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Confidence 567889999999 78998 5999999999977 3 345578899999999999999999999999998754
|
S100Z is a member of the S100 domain family within the EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100Z group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately.S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control. S100Z is normally expressed in various tissues, with its highest level of expression being in spleen and leukocytes. The function of S100Z remains unclear. Preliminary structural data suggests that S100Z is homodimer, however a heterodimer with S100P has been reported. S100Z is capable of binding calcium ions. When calcium binds to S110Z, the protein experiences a conformational change, which exposes hydrophobic surfac |
| >cd05031 S-100A10_like S-100A10_like: S-100A10 domain found in proteins similar to S100A10 | Back alignment and domain information |
|---|
Probab=99.16 E-value=1.4e-10 Score=90.05 Aligned_cols=67 Identities=27% Similarity=0.413 Sum_probs=60.9
Q ss_pred HHHHHHHhhhhcC-CC-CCCcCHHHHHHHHHH-----cCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhh
Q 042823 389 KQKLMEKFREMDT-DN-SDTLTLSELKAGLAK-----LGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDI 455 (477)
Q Consensus 389 ~~~l~~~F~~~D~-~~-~G~I~~~el~~~l~~-----~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~ 455 (477)
...++++|..||. |+ +|+|+.+||+.+|+. +|..+++++++.+++.+|.+++|.|+|+||+.++...
T Consensus 7 ~~~l~~~F~~~D~~dg~dG~Is~~El~~~l~~~~g~~lg~~~s~~ei~~~~~~~D~~~dg~I~f~eF~~l~~~~ 80 (94)
T cd05031 7 MESLILTFHRYAGKDGDKNTLSRKELKKLMEKELSEFLKNQKDPMAVDKIMKDLDQNRDGKVNFEEFVSLVAGL 80 (94)
T ss_pred HHHHHHHHHHHhccCCCCCeECHHHHHHHHHHHhHHHhhccccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence 4679999999997 97 799999999999987 5778899999999999999999999999999988753
|
S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1_like group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions. |
| >cd00213 S-100 S-100: S-100 domain, which represents the largest family within the superfamily of proteins carrying the Ca-binding EF-hand motif | Back alignment and domain information |
|---|
Probab=99.11 E-value=3.1e-10 Score=87.07 Aligned_cols=70 Identities=27% Similarity=0.457 Sum_probs=62.1
Q ss_pred hHHHHHHHHHhhhhcC--CCCCCcCHHHHHHHHHH-cCCCC----CHHHHHHHHHHhcCCCCCcccHHHHHHHHHhh
Q 042823 386 TKEKQKLMEKFREMDT--DNSDTLTLSELKAGLAK-LGSAL----EESEVNQYMEAGDIDGNGNIDSIEFVNLMTDI 455 (477)
Q Consensus 386 ~~~~~~l~~~F~~~D~--~~~G~I~~~el~~~l~~-~g~~~----~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~ 455 (477)
+++++.++.+|..||+ |++|.|+.+||..+++. +|..+ ++++++.++..+|.+++|.|+|++|+.++...
T Consensus 4 ~~~~~~l~~~F~~~D~~~~~~G~Is~~el~~~l~~~~g~~~~~~~~~~ei~~i~~~~d~~~~g~I~f~eF~~~~~~~ 80 (88)
T cd00213 4 EKAIETIIDVFHKYSGKEGDKDTLSKKELKELLETELPNFLKNQKDPEAVDKIMKDLDVNKDGKVDFQEFLVLIGKL 80 (88)
T ss_pred HHHHHHHHHHHHHHhhccCCCCcCcHHHHHHHHHHHhhhhccCCCCHHHHHHHHHHhccCCCCcCcHHHHHHHHHHH
Confidence 3567789999999999 89999999999999986 66544 58999999999999999999999999988753
|
Note that this S-100 hierarchy contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. Intracellularly, S100 proteins act as Ca-signaling or Ca-buffering proteins. The most unusual characteristic of certain S100 proteins is their occurrence in extracellular space, where they act in a cytokine-like manner through RAGE, the receptor for advanced glycation products. Structural data suggest that many S100 members exist within cells as homo- or heterodimers and even oligomers; oligomerization contributes to their functional diversification. Upon binding calcium, most S100 proteins change conformation to a more open structure exposing a hydrophobic cleft. This hydrophobic surface represents th |
| >PF14658 EF-hand_9: EF-hand domain | Back alignment and domain information |
|---|
Probab=99.10 E-value=2.8e-10 Score=78.99 Aligned_cols=61 Identities=26% Similarity=0.437 Sum_probs=58.3
Q ss_pred HhhhhcCCCCCCcCHHHHHHHHHHcCC-CCCHHHHHHHHHHhcCCCC-CcccHHHHHHHHHhh
Q 042823 395 KFREMDTDNSDTLTLSELKAGLAKLGS-ALEESEVNQYMEAGDIDGN-GNIDSIEFVNLMTDI 455 (477)
Q Consensus 395 ~F~~~D~~~~G~I~~~el~~~l~~~g~-~~~~~~i~~~~~~~d~~~~-g~i~~~eF~~~~~~~ 455 (477)
+|+.||.++.|.|...+|...|+++|. .+++++++.+.+++|+++. |.|+|+.|+.+|..+
T Consensus 3 ~F~~fD~~~tG~V~v~~l~~~Lra~~~~~p~e~~Lq~l~~elDP~g~~~~v~~d~F~~iM~~w 65 (66)
T PF14658_consen 3 AFDAFDTQKTGRVPVSDLITYLRAVTGRSPEESELQDLINELDPEGRDGSVNFDTFLAIMRDW 65 (66)
T ss_pred chhhcCCcCCceEeHHHHHHHHHHHcCCCCcHHHHHHHHHHhCCCCCCceEeHHHHHHHHHHh
Confidence 799999999999999999999999998 9999999999999999987 999999999999865
|
|
| >KOG0044 consensus Ca2+ sensor (EF-Hand superfamily) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.09 E-value=2e-09 Score=93.10 Aligned_cols=133 Identities=18% Similarity=0.195 Sum_probs=88.6
Q ss_pred CCchhhHHHHHHhhhcCCCCCCCccHHHHHHHHHhhCCCCC-HHHHHHHHHHhhccc----hHHHHHhcC----ChHHHH
Q 042823 320 LPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLT-EFDVKHLMEAVKNSS----TLESLCENL----PTKEKQ 390 (477)
Q Consensus 320 ~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~-~~~~~~~~~~~d~~~----~~~~~~~~~----~~~~~~ 390 (477)
++..+++.+...|.. ...+|.++.+++..++........ ..-...+++.+|.+. +|.+++..+ .....+
T Consensus 23 f~~~ei~~~Yr~Fk~--~cP~G~~~~~~F~~i~~~~fp~gd~~~y~~~vF~~fD~~~dg~i~F~Efi~als~~~rGt~ee 100 (193)
T KOG0044|consen 23 FSKKEIQQWYRGFKN--ECPSGRLTLEEFREIYASFFPDGDASKYAELVFRTFDKNKDGTIDFLEFICALSLTSRGTLEE 100 (193)
T ss_pred CCHHHHHHHHHHhcc--cCCCCccCHHHHHHHHHHHCCCCCHHHHHHHHHHHhcccCCCCcCHHHHHHHHHHHcCCcHHH
Confidence 344444444444443 445666777777666666654222 233445556665432 344443322 233456
Q ss_pred HHHHHhhhhcCCCCCCcCHHHHHHHHHHc----CC-------CCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHh
Q 042823 391 KLMEKFREMDTDNSDTLTLSELKAGLAKL----GS-------ALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTD 454 (477)
Q Consensus 391 ~l~~~F~~~D~~~~G~I~~~el~~~l~~~----g~-------~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~ 454 (477)
.++.+|++||.|++|+|+.+|+-.+++++ |. .-.++-++.+++++|.|+||.|+++||+..+..
T Consensus 101 kl~w~F~lyD~dgdG~It~~Eml~iv~~i~~m~~~~~~~~~~~~~~~~v~~if~k~D~n~Dg~lT~eef~~~~~~ 175 (193)
T KOG0044|consen 101 KLKWAFRLYDLDGDGYITKEEMLKIVQAIYQMTGSKALPEDEETPEERVDKIFSKMDKNKDGKLTLEEFIEGCKA 175 (193)
T ss_pred HhhhhheeecCCCCceEcHHHHHHHHHHHHHHcccccCCcccccHHHHHHHHHHHcCCCCCCcccHHHHHHHhhh
Confidence 78899999999999999999998887663 32 123456789999999999999999999998764
|
|
| >PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases | Back alignment and domain information |
|---|
Probab=99.08 E-value=7.2e-10 Score=97.08 Aligned_cols=130 Identities=21% Similarity=0.204 Sum_probs=82.0
Q ss_pred EEEEEEEccCCceEEEEEeecCCc-----------------------cchhhHHHHHHHHHHHHhccCC-CCeeEEEEEE
Q 042823 38 VSYLCTENSTNRPYACKSIAKKPK-----------------------MRLAENDMIRREIQIRLYLSGQ-PNVVEFKSTY 93 (477)
Q Consensus 38 ~V~~~~~~~~~~~~aiK~~~~~~~-----------------------~~~~~~~~~~~e~~~~~~l~~h-pniv~~~~~~ 93 (477)
-||.|.. ..|..+|+|+...... ..........+|.+.|.++... -++++++++.
T Consensus 1 ~Vy~~~~-~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~ 79 (188)
T PF01163_consen 1 DVYHAID-PDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN 79 (188)
T ss_dssp EEEEEEE-CTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE
T ss_pred CEEEEEC-CCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe
Confidence 3888886 4577999998753210 0111234567899999999643 2577776553
Q ss_pred EeCCeEEEEEeccC--CCchHHHHHHcCCCCHHHHHHHHHHHHHHHHH-HHHcCCeeccCCCCceeeeecCCCCCEEEee
Q 042823 94 EDETAVHVVMELCE--GGDLFDRIIAKGYNSERDAATVLRAIVNAVNV-CHSMGVMHRDLKPENFSFISRDDNALLKVTD 170 (477)
Q Consensus 94 ~~~~~~~lv~e~~~--gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~-lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~D 170 (477)
. -+|||||++ |..+.. +.... ++......++.+++..+.. +|+.||+||||.+.||++ +++ .+.+||
T Consensus 80 --~--~~ivME~I~~~G~~~~~-l~~~~-~~~~~~~~~~~~il~~~~~~~~~~givHGDLs~~NIlv---~~~-~~~iID 149 (188)
T PF01163_consen 80 --R--NVIVMEYIGEDGVPLPR-LKDVD-LSPEEPKELLEEILEEIIKMLHKAGIVHGDLSEYNILV---DDG-KVYIID 149 (188)
T ss_dssp --T--TEEEEE--EETTEEGGC-HHHCG-GGGSTHHHHHHHHHHHHHHHHHCTTEEESS-STTSEEE---ETT-CEEE--
T ss_pred --C--CEEEEEecCCCccchhh-HHhcc-ccchhHHHHHHHHHHHHHHHHHhcCceecCCChhhEEe---ecc-eEEEEe
Confidence 2 359999998 655543 33322 1244566778888885555 689999999999999999 333 799999
Q ss_pred cCCccccC
Q 042823 171 FGSALLFE 178 (477)
Q Consensus 171 fg~a~~~~ 178 (477)
||.+....
T Consensus 150 f~qav~~~ 157 (188)
T PF01163_consen 150 FGQAVDSS 157 (188)
T ss_dssp GTTEEETT
T ss_pred cCcceecC
Confidence 99887654
|
Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A. |
| >COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.08 E-value=5.5e-09 Score=98.86 Aligned_cols=239 Identities=17% Similarity=0.185 Sum_probs=156.7
Q ss_pred cccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEE-------EeCCe
Q 042823 26 FFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTY-------EDETA 98 (477)
Q Consensus 26 ~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~-------~~~~~ 98 (477)
..++.||+|+-+.+|..-.- + ..+.|++.+-+.-. . ...+..+....+||-+-.=+.+- .....
T Consensus 14 ~~gr~LgqGgea~ly~l~e~--~-d~VAKIYh~Pppa~---~---aqk~a~la~~p~~p~~~~rvaWPqa~L~G~~~~~~ 84 (637)
T COG4248 14 PPGRPLGQGGEADLYTLGEV--R-DQVAKIYHAPPPAA---Q---AQKVAELAATPDAPLLNYRVAWPQATLHGGRRGKV 84 (637)
T ss_pred CCCccccCCccceeeecchh--h-chhheeecCCCchH---H---HHHHHHhccCCCCcchhhhhcccHHHhhCCCccce
Confidence 45789999999999975322 2 23458775433211 1 12233344555676554311110 11223
Q ss_pred EEEEEeccCCCc-hHHHHH---HcC---CCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeec
Q 042823 99 VHVVMELCEGGD-LFDRII---AKG---YNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDF 171 (477)
Q Consensus 99 ~~lv~e~~~gg~-L~~~l~---~~~---~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Df 171 (477)
.-++|..++|.. +..++. ++. .....-+....+.++.+..-||.+|.+-||+.++|+|+ .+.+.|.|+|=
T Consensus 85 iGflmP~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~Gh~vGDVn~~~~lV---sd~~~V~LVds 161 (637)
T COG4248 85 IGFLMPKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHEHGHVVGDVNQNSFLV---SDDSKVVLVDS 161 (637)
T ss_pred eEEecccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHhcCCcccccCccceee---ecCceEEEEcc
Confidence 678888888742 222221 122 23456677888999999999999999999999999999 67788999986
Q ss_pred CCccccCCCcceecccccccccchhhhh-h-----hcCCccchHhHHHHHHHHhhC-CCCCCCCCh----hhHHH-HHHc
Q 042823 172 GSALLFEEGQVYRDIVGSGFYIAPEVLR-R-----RYGKEIDIWSAGVILYILLSG-VPPFWAETK----KGTYD-AILQ 239 (477)
Q Consensus 172 g~a~~~~~~~~~~~~~gt~~y~aPE~~~-~-----~~~~~~DiwslG~il~~l~tg-~~pf~~~~~----~~~~~-~i~~ 239 (477)
..-....++......+|.+.|.+||..+ + .-+...|.|.||+++++++.| ..||.+-.. ...++ .|..
T Consensus 162 Dsfqi~~ng~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~ap~p~E~~Ia~ 241 (637)
T COG4248 162 DSFQINANGTLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDAPNPLETDIAH 241 (637)
T ss_pred cceeeccCCceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcccccCCCCCcchhhhhc
Confidence 5444445555667779999999999865 2 246679999999999999886 999976321 11222 3333
Q ss_pred CCccC------------CCCCCCCCCHHHHHHHHHhccc--CccccCCHHH
Q 042823 240 GEIDF------------DTDPWPSISSTAKDLVRRMLTK--DPKRRITAAQ 276 (477)
Q Consensus 240 ~~~~~------------~~~~~~~~~~~~~~li~~~l~~--dp~~R~s~~~ 276 (477)
+.+.+ ...+|.-+++.+..+..+|+.. ++.-|||++.
T Consensus 242 g~f~ya~~~~~g~~p~P~~~P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a~a 292 (637)
T COG4248 242 GRFAYASDQRRGLKPPPRSIPLSMLPPDVQALFQQAFTESGVATPRPTAKA 292 (637)
T ss_pred ceeeechhccCCCCCCCCCCChhhcCHHHHHHHHHHhcccCCCCCCCCHHH
Confidence 32211 1224455789999999999876 4678998753
|
|
| >PLN02964 phosphatidylserine decarboxylase | Back alignment and domain information |
|---|
Probab=99.07 E-value=1.1e-09 Score=111.65 Aligned_cols=107 Identities=17% Similarity=0.257 Sum_probs=93.3
Q ss_pred cCCchhhHHHHHHhhhcCCCCCCCccHHHHHHHHHhhC-CCCCHHHHHHHHHHhhccchHHHHHhcCChHHHHHHHHHhh
Q 042823 319 YLPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVG-SMLTEFDVKHLMEAVKNSSTLESLCENLPTKEKQKLMEKFR 397 (477)
Q Consensus 319 ~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~-~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~F~ 397 (477)
.+...+..++++.|..+|.|++|.+ +..+++.+| ..+++. +...+.++|+
T Consensus 136 ~f~~kqi~elkeaF~lfD~dgdG~i----Lg~ilrslG~~~pte~-------------------------e~~fi~~mf~ 186 (644)
T PLN02964 136 DFVTQEPESACESFDLLDPSSSNKV----VGSIFVSCSIEDPVET-------------------------ERSFARRILA 186 (644)
T ss_pred hccHHHHHHHHHHHHHHCCCCCCcC----HHHHHHHhCCCCCCHH-------------------------HHHHHHHHHH
Confidence 4455677889999999999999986 888888888 466542 2345778899
Q ss_pred hhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHh
Q 042823 398 EMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTD 454 (477)
Q Consensus 398 ~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~ 454 (477)
.+|.|++|.|+.+||..++..+|...+++++.++|+.+|.|++|.|+++||..++..
T Consensus 187 ~~D~DgdG~IdfdEFl~lL~~lg~~~seEEL~eaFk~fDkDgdG~Is~dEL~~vL~~ 243 (644)
T PLN02964 187 IVDYDEDGQLSFSEFSDLIKAFGNLVAANKKEELFKAADLNGDGVVTIDELAALLAL 243 (644)
T ss_pred HhCCCCCCeEcHHHHHHHHHHhccCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHh
Confidence 999999999999999999999998899999999999999999999999999999876
|
|
| >cd00052 EH Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction | Back alignment and domain information |
|---|
Probab=99.05 E-value=6.1e-10 Score=80.65 Aligned_cols=61 Identities=30% Similarity=0.377 Sum_probs=56.4
Q ss_pred HHHhhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhh
Q 042823 393 MEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDI 455 (477)
Q Consensus 393 ~~~F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~ 455 (477)
+++|+.+|+|++|.|+.+|++.+++.+|. ++++++++++.+|.+++|.|+|+||+.++...
T Consensus 2 ~~~F~~~D~~~~G~i~~~el~~~l~~~g~--~~~~~~~i~~~~d~~~~g~i~~~ef~~~~~~~ 62 (67)
T cd00052 2 DQIFRSLDPDGDGLISGDEARPFLGKSGL--PRSVLAQIWDLADTDKDGKLDKEEFAIAMHLI 62 (67)
T ss_pred hHHHHHhCCCCCCcCcHHHHHHHHHHcCC--CHHHHHHHHHHhcCCCCCcCCHHHHHHHHHHH
Confidence 57899999999999999999999999875 88899999999999999999999999988643
|
The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A hydrophobic binding pocket is formed by residues from both EF-hand motifs. The EH domain binds to proteins containing NPF (class I), [WF]W or SWG (class II), or H[TS]F (class III) sequence motifs. |
| >KOG4223 consensus Reticulocalbin, calumenin, DNA supercoiling factor, and related Ca2+-binding proteins of the CREC family (EF-Hand protein superfamily) [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=99.03 E-value=2e-09 Score=97.95 Aligned_cols=156 Identities=22% Similarity=0.278 Sum_probs=108.6
Q ss_pred chhhHHHHHHhhhcCCCCCCCccHHHHHHHHHhhCCCCCHHHHHHHHHHhhccc----hHHHHHhcCC-----------h
Q 042823 322 DEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNSS----TLESLCENLP-----------T 386 (477)
Q Consensus 322 ~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~----~~~~~~~~~~-----------~ 386 (477)
.+....+..++..+|.+++|.++..||..++..........++.+-+...|.+. .+.+.....- .
T Consensus 73 ee~~~rl~~l~~~iD~~~Dgfv~~~El~~wi~~s~k~~v~~~~~~~~~~~d~~~Dg~i~~eey~~~~~~~~~~~~~~~d~ 152 (325)
T KOG4223|consen 73 EESQERLGKLVPKIDSDSDGFVTESELKAWIMQSQKKYVVEEAARRWDEYDKNKDGFITWEEYLPQTYGRVDLPDEFPDE 152 (325)
T ss_pred chhHHHHHHHHhhhcCCCCCceeHHHHHHHHHHHHHHHHHHHHHHHHHHhccCccceeeHHHhhhhhhhcccCccccccc
Confidence 345567888899999999999999999999887654444555566666665432 2333221110 0
Q ss_pred -------HHHHHHHHHhhhhcCCCCCCcCHHHHHHHHHHcC-CCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhhhCC
Q 042823 387 -------KEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLG-SALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIYKL 458 (477)
Q Consensus 387 -------~~~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g-~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~ 458 (477)
+.+..-++.|+..|.|++|.+|.+||...|---- ..+.+-.|.+-+...|.|+||+|+++||+.=|......
T Consensus 153 e~~~~~~km~~rDe~rFk~AD~d~dg~lt~EEF~aFLHPEe~p~M~~iVi~Etl~d~Dkn~DG~I~~eEfigd~~~~~~~ 232 (325)
T KOG4223|consen 153 EDNEEYKKMIARDEERFKAADQDGDGSLTLEEFTAFLHPEEHPHMKDIVIAETLEDIDKNGDGKISLEEFIGDLYSHEGN 232 (325)
T ss_pred hhcHHHHHHHHHHHHHHhhcccCCCCcccHHHHHhccChhhcchHHHHHHHHHHhhcccCCCCceeHHHHHhHHhhccCC
Confidence 1233456789999999999999999998884422 23444457888899999999999999999988654431
Q ss_pred CcH-----HHHHHHHHHhccCCCC
Q 042823 459 ETP-----ELLEKAFQYLDKNSDQ 477 (477)
Q Consensus 459 ~~~-----~~l~~aF~~~D~d~~G 477 (477)
..+ -+-.+-|...|+|+||
T Consensus 233 ~~epeWv~~Ere~F~~~~DknkDG 256 (325)
T KOG4223|consen 233 EEEPEWVLTEREQFFEFRDKNKDG 256 (325)
T ss_pred CCCcccccccHHHHHHHhhcCCCC
Confidence 111 1233556789999998
|
|
| >cd05023 S-100A11 S-100A11: S-100A11 domain found in proteins similar to S100A11 | Back alignment and domain information |
|---|
Probab=99.01 E-value=1.6e-09 Score=82.34 Aligned_cols=68 Identities=19% Similarity=0.354 Sum_probs=59.7
Q ss_pred HHHHHHHHhhh-hcCCCCC-CcCHHHHHHHHHHc-----CCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhh
Q 042823 388 EKQKLMEKFRE-MDTDNSD-TLTLSELKAGLAKL-----GSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDI 455 (477)
Q Consensus 388 ~~~~l~~~F~~-~D~~~~G-~I~~~el~~~l~~~-----g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~ 455 (477)
.+..|..+|+. +|++++| +|+.+||+.++... +...++.+++++++.+|.|+||.|+|+||+.++...
T Consensus 7 ~i~~l~~~F~~y~~~dg~~~~Ls~~Elk~ll~~e~~~~~~~~~~~~~~~~ll~~~D~d~DG~I~f~EF~~l~~~l 81 (89)
T cd05023 7 CIESLIAVFQKYAGKDGDSYQLSKTEFLSFMNTELASFTKNQKDPGVLDRMMKKLDLNSDGQLDFQEFLNLIGGL 81 (89)
T ss_pred HHHHHHHHHHHHhccCCCcCeECHHHHHHHHHHhhhHhhcCCCCHHHHHHHHHHcCCCCCCcCcHHHHHHHHHHH
Confidence 45688999999 8899986 99999999999875 445678899999999999999999999999988753
|
S100A11 is a member of the S-100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A11 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100 proteins have also been associated with a variety of pathological events, including neoplastic transformation and neurodegenerative diseases such as Alzheimer's, usually via over expression of the protein. S100A11 is expressed in smooth muscle and other tissues and involves in calcium-dependent membrane aggregation, which is important for cell vesiculation . As is the case for many other S100 proteins, S |
| >KOG0044 consensus Ca2+ sensor (EF-Hand superfamily) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.00 E-value=6.1e-09 Score=90.15 Aligned_cols=126 Identities=21% Similarity=0.309 Sum_probs=92.7
Q ss_pred CCccHHHHHHHHHhhC-----CCCCHHHHHHHHHHhhccchHHHHHhcCChHHHHHHHHHhhhhcCCCCCCcCHHHHHHH
Q 042823 341 GTLSYDELRAGLTKVG-----SMLTEFDVKHLMEAVKNSSTLESLCENLPTKEKQKLMEKFREMDTDNSDTLTLSELKAG 415 (477)
Q Consensus 341 G~i~~~el~~~l~~~~-----~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~ 415 (477)
...+.+|+.++.+... ..++..++..++..+-+.+ ....-...+|+.||.|++|+|+.+|+..+
T Consensus 21 t~f~~~ei~~~Yr~Fk~~cP~G~~~~~~F~~i~~~~fp~g-----------d~~~y~~~vF~~fD~~~dg~i~F~Efi~a 89 (193)
T KOG0044|consen 21 TKFSKKEIQQWYRGFKNECPSGRLTLEEFREIYASFFPDG-----------DASKYAELVFRTFDKNKDGTIDFLEFICA 89 (193)
T ss_pred cCCCHHHHHHHHHHhcccCCCCccCHHHHHHHHHHHCCCC-----------CHHHHHHHHHHHhcccCCCCcCHHHHHHH
Confidence 3456677777777762 2345556666665553322 22345568899999999999999999999
Q ss_pred HHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhhhCC-----------CcHHHHHHHHHHhccCCCC
Q 042823 416 LAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIYKL-----------ETPELLEKAFQYLDKNSDQ 477 (477)
Q Consensus 416 l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~-----------~~~~~l~~aF~~~D~d~~G 477 (477)
|..+-..-.++-++-.++.+|.|+||.|+++|++.++...+.. ..++.....|+.+|.|+||
T Consensus 90 ls~~~rGt~eekl~w~F~lyD~dgdG~It~~Eml~iv~~i~~m~~~~~~~~~~~~~~~~v~~if~k~D~n~Dg 162 (193)
T KOG0044|consen 90 LSLTSRGTLEEKLKWAFRLYDLDGDGYITKEEMLKIVQAIYQMTGSKALPEDEETPEERVDKIFSKMDKNKDG 162 (193)
T ss_pred HHHHcCCcHHHHhhhhheeecCCCCceEcHHHHHHHHHHHHHHcccccCCcccccHHHHHHHHHHHcCCCCCC
Confidence 8776544556667788999999999999999999988754431 1235677899999999998
|
|
| >KOG2137 consensus Protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.99 E-value=2.5e-10 Score=114.39 Aligned_cols=152 Identities=18% Similarity=0.272 Sum_probs=109.9
Q ss_pred HHHHHHHHHHHc-CCeeccCCCCceeeeecCCCCCEEEeecCCccccCCCcce----------ecccccccccchhhhhh
Q 042823 132 AIVNAVNVCHSM-GVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVY----------RDIVGSGFYIAPEVLRR 200 (477)
Q Consensus 132 qil~~L~~lH~~-~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~----------~~~~gt~~y~aPE~~~~ 200 (477)
++..||.|+|.. ++||++|.|++|.+ +..+..||+.|+.+....++... .-......|.|||++.+
T Consensus 107 ~v~dgl~flh~sAk~VH~ni~p~~i~~---na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~~ 183 (700)
T KOG2137|consen 107 NVADGLAFLHRSAKVVHGNIQPEAIVV---NANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLLG 183 (700)
T ss_pred cccchhhhhccCcceeecccchhheee---ccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhcc
Confidence 344999999976 89999999999988 88899999999977654432110 01123456999999876
Q ss_pred -hcCCccchHhHHHHHHHHh-hCCCCCCCCChhhHHHHHHcCCccCCCC-CCCCCCHHHHHHHHHhcccCccccCCHHHH
Q 042823 201 -RYGKEIDIWSAGVILYILL-SGVPPFWAETKKGTYDAILQGEIDFDTD-PWPSISSTAKDLVRRMLTKDPKRRITAAQV 277 (477)
Q Consensus 201 -~~~~~~DiwslG~il~~l~-tg~~pf~~~~~~~~~~~i~~~~~~~~~~-~~~~~~~~~~~li~~~l~~dp~~R~s~~~~ 277 (477)
..+.++|++|+||.+|-+. .|+.-+....... .............. ....+++++++=+.+++..++..||++..+
T Consensus 184 ~~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~-~~~~~~~~~~~~~~~~s~~~p~el~~~l~k~l~~~~~~rp~~~~l 262 (700)
T KOG2137|consen 184 TTNTPASDVFSLGVLIYTIYNGGKSIIAANGGLL-SYSFSRNLLNAGAFGYSNNLPSELRESLKKLLNGDSAVRPTLDLL 262 (700)
T ss_pred ccccccccceeeeeEEEEEecCCcchhhccCCcc-hhhhhhcccccccccccccCcHHHHHHHHHHhcCCcccCcchhhh
Confidence 4678999999999999998 4555554433222 22222211111111 114689999999999999999999999999
Q ss_pred hcCcccCcCC
Q 042823 278 LEHPWLRESG 287 (477)
Q Consensus 278 l~h~~~~~~~ 287 (477)
+..|||....
T Consensus 263 ~~~~ff~D~~ 272 (700)
T KOG2137|consen 263 LSIPFFSDPG 272 (700)
T ss_pred hcccccCCch
Confidence 9999998653
|
|
| >PF13833 EF-hand_8: EF-hand domain pair; PDB: 3KF9_A 1TTX_A 1WLZ_A 1ALV_A 1NX3_A 1ALW_A 1NX2_A 1NX1_A 1NX0_A 1DF0_A | Back alignment and domain information |
|---|
Probab=98.99 E-value=1.2e-09 Score=75.22 Aligned_cols=52 Identities=35% Similarity=0.560 Sum_probs=49.2
Q ss_pred CCCCcCHHHHHHHHHHcCCC-CCHHHHHHHHHHhcCCCCCcccHHHHHHHHHh
Q 042823 403 NSDTLTLSELKAGLAKLGSA-LEESEVNQYMEAGDIDGNGNIDSIEFVNLMTD 454 (477)
Q Consensus 403 ~~G~I~~~el~~~l~~~g~~-~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~ 454 (477)
++|.|+.+||+.+|..+|.. +++++++.++..+|.+++|.|+|+||+.++..
T Consensus 1 ~~G~i~~~~~~~~l~~~g~~~~s~~e~~~l~~~~D~~~~G~I~~~EF~~~~~~ 53 (54)
T PF13833_consen 1 KDGKITREEFRRALSKLGIKDLSEEEVDRLFREFDTDGDGYISFDEFISMMQR 53 (54)
T ss_dssp SSSEEEHHHHHHHHHHTTSSSSCHHHHHHHHHHHTTSSSSSEEHHHHHHHHHH
T ss_pred CcCEECHHHHHHHHHHhCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHHh
Confidence 47999999999999889999 99999999999999999999999999999864
|
... |
| >PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional | Back alignment and domain information |
|---|
Probab=98.99 E-value=2e-08 Score=93.44 Aligned_cols=138 Identities=15% Similarity=0.056 Sum_probs=91.7
Q ss_pred eEEEEEEEccCCceEEEEEeecCCcc---c-----hhhHHHHHHHHHHHHhccCC-CCeeEEEEEEEe-----CCeEEEE
Q 042823 37 GVSYLCTENSTNRPYACKSIAKKPKM---R-----LAENDMIRREIQIRLYLSGQ-PNVVEFKSTYED-----ETAVHVV 102 (477)
Q Consensus 37 g~V~~~~~~~~~~~~aiK~~~~~~~~---~-----~~~~~~~~~e~~~~~~l~~h-pniv~~~~~~~~-----~~~~~lv 102 (477)
..|+++.. .|+.|.||........ . ........+|...+..|... -..+.+..+.+. ...-++|
T Consensus 36 rrvvr~~~--~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~~~~s~LV 113 (268)
T PRK15123 36 RRTLRFEL--AGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPATRTSFII 113 (268)
T ss_pred ceEEEEEE--CCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCccceeEEE
Confidence 34555543 5678999966322100 0 01112356787777766311 112233334432 2357899
Q ss_pred EeccCCC-chHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeec----CCCCCEEEeecCCcc
Q 042823 103 MELCEGG-DLFDRIIA--KGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISR----DDNALLKVTDFGSAL 175 (477)
Q Consensus 103 ~e~~~gg-~L~~~l~~--~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~----~~~~~~kl~Dfg~a~ 175 (477)
||+++|. +|.+++.. ....++.....++.++...+.-||.+||+|+|++|.|||+... ++...+.||||+.+.
T Consensus 114 te~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~~i~~LH~~Gi~HgDL~~~NiLl~~~~~~~~~~~~~~LIDl~r~~ 193 (268)
T PRK15123 114 TEDLAPTISLEDYCADWATNPPDPRLKRMLIKRVATMVRDMHAAGINHRDCYICHFLLHLPFPGREEDLKLSVIDLHRAQ 193 (268)
T ss_pred EeeCCCCccHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCcCccCCCChhhEEEeccccCCCCCceEEEEECCccc
Confidence 9999885 78888754 3445667788999999999999999999999999999999531 235689999999775
Q ss_pred c
Q 042823 176 L 176 (477)
Q Consensus 176 ~ 176 (477)
.
T Consensus 194 ~ 194 (268)
T PRK15123 194 I 194 (268)
T ss_pred c
Confidence 3
|
|
| >KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.92 E-value=1.3e-10 Score=114.92 Aligned_cols=241 Identities=18% Similarity=0.179 Sum_probs=169.5
Q ss_pred ccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCC-eeEEEEEEEeCCeEEE
Q 042823 23 LHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPN-VVEFKSTYEDETAVHV 101 (477)
Q Consensus 23 ~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpn-iv~~~~~~~~~~~~~l 101 (477)
.-|....-+++|+++.+++.+...+...+ .+.+... ....-+++++.++ +||| .+..++.++.+.+..+
T Consensus 242 kws~~fh~fvK~altknpKkRptaeklL~-h~fvs~~--------l~~rl~~eLLdK~-n~P~~~v~~~~d~~~E~~~~i 311 (829)
T KOG0576|consen 242 KWSEFFHNFVKGALTKNPKKRPTAEKLLQ-HPFVSQT--------LSRRLAIELLDKV-NNPNPVVRYLEDYDGEDYLWI 311 (829)
T ss_pred cchHHHHHHHHHHhcCCCccCCChhhhee-ceeeccc--------hhhHHHHHHHHHc-cCCCCcccccccCCcccccch
Confidence 34566677999999999998876554433 5555322 2345577788888 7999 8888888888899999
Q ss_pred EEeccCCC-c-hHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCC
Q 042823 102 VMELCEGG-D-LFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEE 179 (477)
Q Consensus 102 v~e~~~gg-~-L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~ 179 (477)
+|++|+++ + ....-...-.+.+-+...+.+.-+.+|+++|+.-=+||| ||+. .++..|..||+....+.+
T Consensus 312 ~~~i~s~~rs~~~~~~~se~~~~~~~~~~~~r~et~~l~~l~~~~~~~~d----~~l~----s~~~~~~~~~~v~~~L~~ 383 (829)
T KOG0576|consen 312 PMRICSTGRSSALEMTVSEIALEQYQFAYPLRKETRPLAELHSSYKVHRD----NILG----SEEEVKLLDFAVPPQLTR 383 (829)
T ss_pred hhhhhcCCccccccCChhhHhhhhhhhhhhhhhhcccccccccccccCcc----cccc----cccccccccccCCcccCc
Confidence 99999987 2 221111222344555667778888999999998778998 7655 456789999999888776
Q ss_pred Ccceecccccccccchhhhh-hhcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCcc--CCC-CCCCCCCHH
Q 042823 180 GQVYRDIVGSGFYIAPEVLR-RRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEID--FDT-DPWPSISST 255 (477)
Q Consensus 180 ~~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~--~~~-~~~~~~~~~ 255 (477)
....+...+|+.++|||+.. +.+....|+||+|+-..+|.-|.+|-..... ....+-.+... ... ..| ++.
T Consensus 384 ~~~~~t~~~~~~~~~pev~~~~~~~~~p~~~~~~~~~~~~ap~~pPr~~P~~--~~~~~g~~p~s~~L~~~~aw---~~~ 458 (829)
T KOG0576|consen 384 TMKPRTAIGTPEPLAPEVIQENTIDGCPDSGSLAVSAIQMAPGLPPRSSPPA--VLPMIGNGPNSPMLTDKSAW---SPV 458 (829)
T ss_pred ccccccCCCCCCCCCchhhcccccccCCCccCCCcchhhcCCCCCCCCCCcc--ccCCCCCCCCccccchhhhc---Ccc
Confidence 65567788999999999765 5688999999999888888888888644111 11111111000 000 111 111
Q ss_pred H-HHHHHHhcccCccccCCHHHHhcCcccCcC
Q 042823 256 A-KDLVRRMLTKDPKRRITAAQVLEHPWLRES 286 (477)
Q Consensus 256 ~-~~li~~~l~~dp~~R~s~~~~l~h~~~~~~ 286 (477)
. .++...|+..-|..|+....++.|.+|...
T Consensus 459 ~~~~~~~~~~~g~P~~pkv~mgacfsKvfngC 490 (829)
T KOG0576|consen 459 FHRDFPAPCLNGLPPTPKVHMGACFSKVFNGC 490 (829)
T ss_pred cccCCcccccCCCCCCCcchhhHHHHHHhccC
Confidence 2 247889999999999999999999998754
|
|
| >cd00051 EFh EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands | Back alignment and domain information |
|---|
Probab=98.84 E-value=1.2e-08 Score=72.19 Aligned_cols=61 Identities=44% Similarity=0.698 Sum_probs=57.8
Q ss_pred HHHHhhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHH
Q 042823 392 LMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLM 452 (477)
Q Consensus 392 l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~ 452 (477)
++.+|+.+|.+++|.|+.+|+..+++.+|...+.+++..++..+|.+++|.|++++|+.++
T Consensus 2 ~~~~f~~~d~~~~g~l~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ef~~~~ 62 (63)
T cd00051 2 LREAFRLFDKDGDGTISADELKAALKSLGEGLSEEEIDEMIREVDKDGDGKIDFEEFLELM 62 (63)
T ss_pred HHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHh
Confidence 5678999999999999999999999999999999999999999999999999999998765
|
Ca2+ binding induces a conformational change in the EF-hand motif, leading to the activation or inactivation of target proteins. EF-hands tend to occur in pairs or higher copy numbers. |
| >PF13499 EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A 1TN4_A 1A2X_A 2CT9_B 2OTG_B 2OS8_B 1SNL_A 3O4Y_A 3J04_E | Back alignment and domain information |
|---|
Probab=98.84 E-value=1.1e-08 Score=73.80 Aligned_cols=66 Identities=30% Similarity=0.519 Sum_probs=55.5
Q ss_pred HHHHHhhhcCCCCCCCccHHHHHHHHHhhCCCCCHHHHHHHHHHhhccchHHHHHhcCChHHHHHHHHHhhhhcCCCCCC
Q 042823 327 ALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNSSTLESLCENLPTKEKQKLMEKFREMDTDNSDT 406 (477)
Q Consensus 327 ~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~F~~~D~~~~G~ 406 (477)
+++++|..+|.+++|+|+.+||..++..++...+...+ .+.+..+|+.+|+|++|.
T Consensus 1 ~l~~~F~~~D~d~~G~i~~~el~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~~D~d~dG~ 56 (66)
T PF13499_consen 1 RLKEAFKKFDKDGDGYISKEELRRALKHLGRDMSDEES------------------------DEMIDQIFREFDTDGDGR 56 (66)
T ss_dssp HHHHHHHHHSTTSSSEEEHHHHHHHHHHTTSHSTHHHH------------------------HHHHHHHHHHHTTTSSSS
T ss_pred CHHHHHHHHcCCccCCCCHHHHHHHHHHhcccccHHHH------------------------HHHHHHHHHHhCCCCcCC
Confidence 47889999999999999999999999999876653333 235567799999999999
Q ss_pred cCHHHHHHHH
Q 042823 407 LTLSELKAGL 416 (477)
Q Consensus 407 I~~~el~~~l 416 (477)
|+.+||..++
T Consensus 57 i~~~Ef~~~~ 66 (66)
T PF13499_consen 57 ISFDEFLNFM 66 (66)
T ss_dssp EEHHHHHHHH
T ss_pred CcHHHHhccC
Confidence 9999998764
|
... |
| >KOG0034 consensus Ca2+/calmodulin-dependent protein phosphatase (calcineurin subunit B), EF-Hand superfamily protein [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.83 E-value=2.3e-08 Score=86.53 Aligned_cols=91 Identities=26% Similarity=0.399 Sum_probs=78.3
Q ss_pred cCChHHHHHHHHHhhhhcCC-CCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCc-ccHHHHHHHHHhhhCCCc
Q 042823 383 NLPTKEKQKLMEKFREMDTD-NSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGN-IDSIEFVNLMTDIYKLET 460 (477)
Q Consensus 383 ~~~~~~~~~l~~~F~~~D~~-~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~-i~~~eF~~~~~~~~~~~~ 460 (477)
.++..++..|...|..+|.+ ++|.|+.+||..+. .+..++ -.++++..++.+++|. |+|++|++.+....+...
T Consensus 26 ~fs~~EI~~L~~rF~kl~~~~~~g~lt~eef~~i~-~~~~Np---~~~rI~~~f~~~~~~~~v~F~~Fv~~ls~f~~~~~ 101 (187)
T KOG0034|consen 26 QFSANEIERLYERFKKLDRNNGDGYLTKEEFLSIP-ELALNP---LADRIIDRFDTDGNGDPVDFEEFVRLLSVFSPKAS 101 (187)
T ss_pred ccCHHHHHHHHHHHHHhccccccCccCHHHHHHHH-HHhcCc---HHHHHHHHHhccCCCCccCHHHHHHHHhhhcCCcc
Confidence 36678899999999999999 99999999999988 333343 4678899999988888 999999999998777665
Q ss_pred HH-HHHHHHHHhccCCCC
Q 042823 461 PE-LLEKAFQYLDKNSDQ 477 (477)
Q Consensus 461 ~~-~l~~aF~~~D~d~~G 477 (477)
.+ .++-||++||.+++|
T Consensus 102 ~~~Kl~faF~vYD~~~~G 119 (187)
T KOG0034|consen 102 KREKLRFAFRVYDLDGDG 119 (187)
T ss_pred HHHHHHHHHHHhcCCCCC
Confidence 54 899999999999998
|
|
| >COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.83 E-value=3.6e-08 Score=88.90 Aligned_cols=139 Identities=21% Similarity=0.205 Sum_probs=100.9
Q ss_pred ccccccccccCCeEEEEEEEccCCceEEEEEeecCC-----------------ccc--hhhHHHHHHHHHHHHhccCC-C
Q 042823 25 YFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKP-----------------KMR--LAENDMIRREIQIRLYLSGQ-P 84 (477)
Q Consensus 25 Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~-----------------~~~--~~~~~~~~~e~~~~~~l~~h-p 84 (477)
+.++.+||-|--|.||.|.+. .|.++|+|.=.... ..+ ..+....++|..+|..|..+ -
T Consensus 93 e~iG~~IGvGKEsdVY~~~~~-~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~ 171 (304)
T COG0478 93 EAIGTKIGVGKESDVYVAIDP-KGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGV 171 (304)
T ss_pred HhhccccccCccceEEEEECC-CCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCC
Confidence 567899999999999999875 68899999642110 000 11234467899999999544 3
Q ss_pred CeeEEEEEEEeCCeEEEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCC
Q 042823 85 NVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNA 164 (477)
Q Consensus 85 niv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~ 164 (477)
.+++.+++ +.-.+||||++|-.|... +++...+..++..|+.-+.-+-..|+||+|+++-||++ ++++
T Consensus 172 ~VP~P~~~----nRHaVvMe~ieG~eL~~~-----r~~~en~~~il~~il~~~~~~~~~GiVHGDlSefNIlV---~~dg 239 (304)
T COG0478 172 KVPKPIAW----NRHAVVMEYIEGVELYRL-----RLDVENPDEILDKILEEVRKAYRRGIVHGDLSEFNILV---TEDG 239 (304)
T ss_pred CCCCcccc----ccceeeeehcccceeecc-----cCcccCHHHHHHHHHHHHHHHHHcCccccCCchheEEE---ecCC
Confidence 56666553 345699999999776432 12355566677777777777778999999999999999 7788
Q ss_pred CEEEeecCCccc
Q 042823 165 LLKVTDFGSALL 176 (477)
Q Consensus 165 ~~kl~Dfg~a~~ 176 (477)
.+.++||-.+..
T Consensus 240 ~~~vIDwPQ~v~ 251 (304)
T COG0478 240 DIVVIDWPQAVP 251 (304)
T ss_pred CEEEEeCccccc
Confidence 899999965543
|
|
| >cd00252 SPARC_EC SPARC_EC; extracellular Ca2+ binding domain (containing 2 EF-hand motifs) of SPARC and related proteins (QR1, SC1/hevin, testican and tsc-36/FRP) | Back alignment and domain information |
|---|
Probab=98.83 E-value=1.5e-08 Score=80.70 Aligned_cols=64 Identities=20% Similarity=0.248 Sum_probs=56.7
Q ss_pred hHHHHHHHHHhhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHH
Q 042823 386 TKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMT 453 (477)
Q Consensus 386 ~~~~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~ 453 (477)
...+..+..+|..+|.|+||.|+.+||..+. ..+.+..+..++..+|.|+||.||++||..++.
T Consensus 44 ~~~~~~l~w~F~~lD~d~DG~Ls~~EL~~~~----l~~~e~~~~~f~~~~D~n~Dg~IS~~Ef~~cl~ 107 (116)
T cd00252 44 PMCKDPVGWMFNQLDGNYDGKLSHHELAPIR----LDPNEHCIKPFFESCDLDKDGSISLDEWCYCFI 107 (116)
T ss_pred HHHHHHHHHHHHHHCCCCCCcCCHHHHHHHH----ccchHHHHHHHHHHHCCCCCCCCCHHHHHHHHh
Confidence 3456789999999999999999999999876 335577899999999999999999999999984
|
SPARC (BM-40) is a multifunctional glycoprotein, a matricellular protein, that functions to regulate cell-matrix interactions; binds to such proteins as collagen and vitronectin and binds to endothelial cells thus inhibiting cellular proliferation. The EC domain interacts with a follistatin-like (FS) domain which appears to stabilize Ca2+ binding. The two EF-hands interact canonically but their conserved disulfide bonds confer a tight association between the EF-hand pair and an acid/amphiphilic N-terminal helix. Proposed active form involves a Ca2+ dependent symmetric homodimerization of EC-FS modules. |
| >PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases | Back alignment and domain information |
|---|
Probab=98.82 E-value=8e-08 Score=86.40 Aligned_cols=109 Identities=20% Similarity=0.180 Sum_probs=82.0
Q ss_pred HHHHHHHHHHHhccC-CCCeeEEEEEEEeC----CeEEEEEeccCCC-chHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH
Q 042823 68 DMIRREIQIRLYLSG-QPNVVEFKSTYEDE----TAVHVVMELCEGG-DLFDRIIAKGYNSERDAATVLRAIVNAVNVCH 141 (477)
Q Consensus 68 ~~~~~e~~~~~~l~~-hpniv~~~~~~~~~----~~~~lv~e~~~gg-~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH 141 (477)
....+|...+..|.. .=.+++.+.+.+.. ...++|+|+++|. +|.+++......+......++.++...+.-||
T Consensus 56 ~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~~~~~~~~~~ll~~l~~~i~~lH 135 (206)
T PF06293_consen 56 SRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWEQLDPSQRRELLRALARLIAKLH 135 (206)
T ss_pred hHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhcccchhhHHHHHHHHHHHHHHHH
Confidence 356677776666642 12244445555432 2458999999984 78888877555777788899999999999999
Q ss_pred HcCCeeccCCCCceeeeecCCCCCEEEeecCCccc
Q 042823 142 SMGVMHRDLKPENFSFISRDDNALLKVTDFGSALL 176 (477)
Q Consensus 142 ~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~ 176 (477)
.+||+|+|++|.|||+...+....+.++||+-+..
T Consensus 136 ~~gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~ 170 (206)
T PF06293_consen 136 DAGIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRF 170 (206)
T ss_pred HCcCCCCCCCcccEEEeCCCCceeEEEEcchhcee
Confidence 99999999999999995544455899999997664
|
Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane |
| >KOG0037 consensus Ca2+-binding protein, EF-Hand protein superfamily [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.80 E-value=2.6e-08 Score=85.77 Aligned_cols=82 Identities=23% Similarity=0.288 Sum_probs=73.9
Q ss_pred HHHHHHhhhhcCCCCCCcCHHHHHHHHHHcC-CCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhhhCCCcHHHHHHHH
Q 042823 390 QKLMEKFREMDTDNSDTLTLSELKAGLAKLG-SALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIYKLETPELLEKAF 468 (477)
Q Consensus 390 ~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g-~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~l~~aF 468 (477)
..+...|...|+|+.|.|+.+||+.+|...+ ...+.+.+..|+..+|.+.+|+|+|.||..+...+. .+++.|
T Consensus 57 ~~~~~~f~~vD~d~sg~i~~~eLq~aLsn~~~~~Fs~~TcrlmI~mfd~~~~G~i~f~EF~~Lw~~i~------~Wr~vF 130 (221)
T KOG0037|consen 57 PQLAGWFQSVDRDRSGRILAKELQQALSNGTWSPFSIETCRLMISMFDRDNSGTIGFKEFKALWKYIN------QWRNVF 130 (221)
T ss_pred HHHHHHHHhhCccccccccHHHHHHHhhcCCCCCCCHHHHHHHHHHhcCCCCCccCHHHHHHHHHHHH------HHHHHH
Confidence 4788899999999999999999999998654 568888999999999999999999999999987643 799999
Q ss_pred HHhccCCCC
Q 042823 469 QYLDKNSDQ 477 (477)
Q Consensus 469 ~~~D~d~~G 477 (477)
+.||+|++|
T Consensus 131 ~~~D~D~SG 139 (221)
T KOG0037|consen 131 RTYDRDRSG 139 (221)
T ss_pred HhcccCCCC
Confidence 999999987
|
|
| >cd05030 calgranulins Calgranulins: S-100 domain found in proteins belonging to the Calgranulin subgroup of the S100 family of EF-hand calcium-modulated proteins, including S100A8, S100A9, and S100A12 | Back alignment and domain information |
|---|
Probab=98.77 E-value=2.8e-08 Score=75.73 Aligned_cols=67 Identities=21% Similarity=0.377 Sum_probs=59.3
Q ss_pred HHHHHHHhhhhcCC--CCCCcCHHHHHHHHH-HcCCCCC----HHHHHHHHHHhcCCCCCcccHHHHHHHHHhh
Q 042823 389 KQKLMEKFREMDTD--NSDTLTLSELKAGLA-KLGSALE----ESEVNQYMEAGDIDGNGNIDSIEFVNLMTDI 455 (477)
Q Consensus 389 ~~~l~~~F~~~D~~--~~G~I~~~el~~~l~-~~g~~~~----~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~ 455 (477)
+..+...|..++.. ++|.|+.+||+.+|. .+|..++ +++++.+++.+|.+++|.|+|+||+.++...
T Consensus 7 i~~~~~~f~~y~~~~~~~~~Is~~El~~ll~~~~g~~~t~~~~~~~v~~i~~~~D~d~dG~I~f~eF~~~~~~~ 80 (88)
T cd05030 7 IETIINVFHQYSVRKGHPDTLYKKEFKQLVEKELPNFLKKEKNQKAIDKIFEDLDTNQDGQLSFEEFLVLVIKV 80 (88)
T ss_pred HHHHHHHHHHHhccCCCcccCCHHHHHHHHHHHhhHhhccCCCHHHHHHHHHHcCCCCCCcCcHHHHHHHHHHH
Confidence 56788899999966 489999999999996 5777777 8999999999999999999999999988753
|
Note that the S-100 hierarchy, to which this Calgranulin group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. These proteins are expressed mainly in granulocytes, and are involved in inflammation, allergy, and neuritogenesis, as well as in host-parasite response. Calgranulins are modulated not only by calcium, but also by other metals such as zinc and copper. Structural data suggested that calgranulins may exist in multiple structural forms, homodimers, as well as hetero-oligomers. For example, the S100A8/S100A9 complex called calprotectin plays important roles in the regulation of inflammatory processes, wound repair, and regulating zinc-dependent enzymes as well as microbial growth. |
| >KOG0377 consensus Protein serine/threonine phosphatase RDGC/PPEF, contains STphosphatase and EF-hand domains [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.74 E-value=1.2e-07 Score=89.35 Aligned_cols=130 Identities=24% Similarity=0.377 Sum_probs=92.5
Q ss_pred hhHHHHHHhhhcCCCCCCCccHHHHHHHHHhh-CCCCCHHH---------------HHHHHHHhhccchHHHHHhcCCh-
Q 042823 324 ETQALKEKFIEMDTDKNGTLSYDELRAGLTKV-GSMLTEFD---------------VKHLMEAVKNSSTLESLCENLPT- 386 (477)
Q Consensus 324 ~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~-~~~~~~~~---------------~~~~~~~~d~~~~~~~~~~~~~~- 386 (477)
....+...|..+|.+++|+|+......+++.+ |..++=.- ..+-++.++.....++.-..+-+
T Consensus 462 ~~sdL~~eF~~~D~~ksG~lsis~Wa~~mE~i~~L~LPWr~L~~kla~~s~d~~v~Y~~~~~~l~~e~~~~ea~~slvet 541 (631)
T KOG0377|consen 462 HRSDLEDEFRKYDPKKSGKLSISHWAKCMENITGLNLPWRLLRPKLANGSDDGKVEYKSTLDNLDTEVILEEAGSSLVET 541 (631)
T ss_pred hhhHHHHHHHhcChhhcCeeeHHHHHHHHHHHhcCCCcHHHhhhhccCCCcCcceehHhHHHHhhhhhHHHHHHhHHHHH
Confidence 34567889999999999999999999988875 33333211 12222222222222221000000
Q ss_pred --HHHHHHHHHhhhhcCCCCCCcCHHHHHHHHHHc----CCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHH
Q 042823 387 --KEKQKLMEKFREMDTDNSDTLTLSELKAGLAKL----GSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMT 453 (477)
Q Consensus 387 --~~~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~----g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~ 453 (477)
-....|..+|+.+|.|++|.|+.+||+.+..-+ ...++++++.++-+.+|.|+||.|+++||+.+..
T Consensus 542 LYr~ks~LetiF~~iD~D~SG~isldEF~~a~~l~~sh~~~~i~~~~i~~la~~mD~NkDG~IDlNEfLeAFr 614 (631)
T KOG0377|consen 542 LYRNKSSLETIFNIIDADNSGEISLDEFRTAWKLLSSHMNGAISDDEILELARSMDLNKDGKIDLNEFLEAFR 614 (631)
T ss_pred HHhchhhHHHHHHHhccCCCCceeHHHHHHHHHHHHhhcCCCcCHHHHHHHHHhhccCCCCcccHHHHHHHHh
Confidence 123457788999999999999999999987665 4578899999999999999999999999998765
|
|
| >KOG0041 consensus Predicted Ca2+-binding protein, EF-Hand protein superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.70 E-value=7.7e-08 Score=81.11 Aligned_cols=75 Identities=21% Similarity=0.321 Sum_probs=68.7
Q ss_pred cCChHHHHHHHHHhhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhhhC
Q 042823 383 NLPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIYK 457 (477)
Q Consensus 383 ~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~~~ 457 (477)
.++..+++.+..+|+.+|.+.||+|+..||+.+|..+|.+-|.--+..||+++|.|.||+|+|-||+-+..+...
T Consensus 92 eFsrkqIk~~~~~Fk~yDe~rDgfIdl~ELK~mmEKLgapQTHL~lK~mikeVded~dgklSfreflLIfrkaaa 166 (244)
T KOG0041|consen 92 EFSRKQIKDAESMFKQYDEDRDGFIDLMELKRMMEKLGAPQTHLGLKNMIKEVDEDFDGKLSFREFLLIFRKAAA 166 (244)
T ss_pred HHHHHHHHHHHHHHHHhcccccccccHHHHHHHHHHhCCchhhHHHHHHHHHhhcccccchhHHHHHHHHHHHhc
Confidence 345678899999999999999999999999999999999999988999999999999999999999988876544
|
|
| >PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY) | Back alignment and domain information |
|---|
Probab=98.69 E-value=2.5e-07 Score=81.85 Aligned_cols=141 Identities=18% Similarity=0.155 Sum_probs=85.0
Q ss_pred ccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhH------HHHHHHHHHHHhcc--CCCCeeEEEEE
Q 042823 21 VMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAEN------DMIRREIQIRLYLS--GQPNVVEFKST 92 (477)
Q Consensus 21 ~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~------~~~~~e~~~~~~l~--~hpniv~~~~~ 92 (477)
+...|.+.+.+-......|.+.. ..|+.+++|............. ....+++....++. +--....++-+
T Consensus 29 ~~~~~~~~kv~k~~~r~~ValIe--i~~~kyIlK~pr~~~~r~er~~~sf~kg~~~~~l~~~~~~i~~~g~~~~~~~yl~ 106 (229)
T PF06176_consen 29 LDNNYKIIKVFKNTKRNYVALIE--IDGKKYILKEPREENRRPERRFKSFFKGSEYSRLINNTDKIRNEGFTEPADPYLA 106 (229)
T ss_pred HhCCceEEEeecCCCccEEEEEE--ECCcEEEEeccchhhhhHHHHHHHHhccHHHHHHHHHHHHHHHcCccccccceee
Confidence 34557777777776666666654 4578889997654322111111 11223333333332 12222222222
Q ss_pred E-----EeCCeEEEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEE
Q 042823 93 Y-----EDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLK 167 (477)
Q Consensus 93 ~-----~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~k 167 (477)
. .-....++||||++|..|.+... +++ .+...+..++.-+|+.|++|+|++|.|+++ . ++.++
T Consensus 107 ~ekk~~~~~~~~~ll~EYIeG~~l~d~~~----i~e----~~~~ki~~~ikqlH~~G~~HGD~hpgNFlv---~-~~~i~ 174 (229)
T PF06176_consen 107 AEKKIFRYTSSYVLLMEYIEGVELNDIED----IDE----DLAEKIVEAIKQLHKHGFYHGDPHPGNFLV---S-NNGIR 174 (229)
T ss_pred eeeeeccceeEEEEEEEEecCeecccchh----cCH----HHHHHHHHHHHHHHHcCCccCCCCcCcEEE---E-CCcEE
Confidence 2 22344678999999988865432 233 244567778999999999999999999888 3 34499
Q ss_pred EeecCCcc
Q 042823 168 VTDFGSAL 175 (477)
Q Consensus 168 l~Dfg~a~ 175 (477)
++||+...
T Consensus 175 iID~~~k~ 182 (229)
T PF06176_consen 175 IIDTQGKR 182 (229)
T ss_pred EEECcccc
Confidence 99998654
|
The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process |
| >COG0661 AarF Predicted unusual protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.67 E-value=1.7e-07 Score=94.48 Aligned_cols=144 Identities=19% Similarity=0.157 Sum_probs=95.4
Q ss_pred ccccccCCeEEEEEEEccCCceEEEEEeecCCccc--------------------------h-hhH----H------HHH
Q 042823 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMR--------------------------L-AEN----D------MIR 71 (477)
Q Consensus 29 ~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~--------------------------~-~~~----~------~~~ 71 (477)
.+|+.++-|.||+|+.++ |+.||||+........ . ... + .+.
T Consensus 131 ~PiAsASIaQVH~A~L~s-G~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ElDy~ 209 (517)
T COG0661 131 EPIASASIAQVHRAVLKS-GEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREELDYR 209 (517)
T ss_pred CchhhhhHhhheeEEecC-CCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHHhCHH
Confidence 789999999999999864 9999999975321100 0 000 1 123
Q ss_pred HHHHHHHhc----cCCCCeeEEEEEEEeCCeEEEEEeccCCCchHHHH--HHcCCCCHHHHHHHHHHHHHHHHHHHHcCC
Q 042823 72 REIQIRLYL----SGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRI--IAKGYNSERDAATVLRAIVNAVNVCHSMGV 145 (477)
Q Consensus 72 ~e~~~~~~l----~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l--~~~~~~~~~~~~~i~~qil~~L~~lH~~~i 145 (477)
+|...+.++ .+.|++.-..=+++..+.-.++|||+.|-.+.+.. .. ...+...+...+.++. +..+-..|+
T Consensus 210 ~EA~n~~~~~~nf~~~~~v~VP~V~we~t~~~VLtmE~i~Gi~i~d~~~l~~-~g~d~k~ia~~~~~~f--~~q~~~dgf 286 (517)
T COG0661 210 REAANAERFRENFKDDPDVYVPKVYWEYTTRRVLTMEWIDGIKISDIAALKS-AGIDRKELAELLVRAF--LRQLLRDGF 286 (517)
T ss_pred HHHHHHHHHHHHcCCCCCeEeceeehhccCCcEEEEEeeCCEecccHHHHHh-cCCCHHHHHHHHHHHH--HHHHHhcCc
Confidence 344433333 25666655555566566678999999998887774 44 3345444333322222 223334899
Q ss_pred eeccCCCCceeeeecCCCCCEEEeecCCccccCC
Q 042823 146 MHRDLKPENFSFISRDDNALLKVTDFGSALLFEE 179 (477)
Q Consensus 146 vH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~ 179 (477)
.|.|.+|.||++ +.++.+.+.|||+....++
T Consensus 287 fHaDpHpGNi~v---~~~g~i~~lDfGi~g~l~~ 317 (517)
T COG0661 287 FHADPHPGNILV---RSDGRIVLLDFGIVGRLDP 317 (517)
T ss_pred cccCCCccceEE---ecCCcEEEEcCcceecCCH
Confidence 999999999999 7778999999999876654
|
|
| >KOG0036 consensus Predicted mitochondrial carrier protein [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.67 E-value=1.1e-07 Score=89.11 Aligned_cols=86 Identities=24% Similarity=0.392 Sum_probs=65.1
Q ss_pred HHHHHHHHHhhhhcCCCCCCcCHHHHHHHHHHcCCC-CCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhhhCCCcHHHHH
Q 042823 387 KEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSA-LEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIYKLETPELLE 465 (477)
Q Consensus 387 ~~~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~-~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~l~ 465 (477)
+...+++..|+.||.+++|.++..+|...+.+++.+ +..+....+++.+|.|.||.++|+||...+.. .+.++.
T Consensus 11 er~~r~~~lf~~lD~~~~g~~d~~~l~k~~~~l~~~~~~~~~~~~l~~~~d~~~dg~vDy~eF~~Y~~~-----~E~~l~ 85 (463)
T KOG0036|consen 11 ERDIRIRCLFKELDSKNDGQVDLDQLEKGLEKLDHPKPNYEAAKMLFSAMDANRDGRVDYSEFKRYLDN-----KELELY 85 (463)
T ss_pred HHHHHHHHHHHHhccCCCCceeHHHHHHHHHhcCCCCCchHHHHHHHHhcccCcCCcccHHHHHHHHHH-----hHHHHH
Confidence 334567778888888888888888888888887665 66677777888888888888888888877753 345677
Q ss_pred HHHHHhccCCCC
Q 042823 466 KAFQYLDKNSDQ 477 (477)
Q Consensus 466 ~aF~~~D~d~~G 477 (477)
+.|+.+|.|.||
T Consensus 86 ~~F~~iD~~hdG 97 (463)
T KOG0036|consen 86 RIFQSIDLEHDG 97 (463)
T ss_pred HHHhhhccccCC
Confidence 777777777776
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 477 | ||||
| 3igo_A | 486 | Crystal Structure Of Cryptosporidium Parvum Cdpk1, | 4e-62 | ||
| 3lij_A | 494 | Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) | 2e-61 | ||
| 3hzt_A | 467 | Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme4 | 9e-59 | ||
| 3ku2_A | 507 | Crystal Structure Of Inactivated Form Of Cdpk1 From | 2e-57 | ||
| 3hx4_A | 508 | Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tg | 2e-57 | ||
| 3f3z_A | 277 | Crystal Structure Of Cryptosporidium Parvum Calcium | 4e-57 | ||
| 2qg5_A | 294 | Cryptosporidium Parvum Calcium Dependent Protein Ki | 4e-57 | ||
| 3i79_A | 484 | Calcium-Dependent Protein Kinase 1 From Toxoplasma | 5e-57 | ||
| 2w4o_A | 349 | Crystal Structure Of Human Camk4 In Complex With 4- | 1e-56 | ||
| 3i7c_A | 484 | Calcium-Dependent Protein Kinase 1 From Toxoplasma | 2e-55 | ||
| 2wei_A | 287 | Crystal Structure Of The Kinase Domain Of Cryptospo | 4e-55 | ||
| 3dfa_A | 286 | Crystal Structure Of Kinase Domain Of Calcium-depen | 4e-55 | ||
| 2jc6_A | 334 | Crystal Structure Of Human Calmodulin-Dependent Pro | 8e-55 | ||
| 1a06_A | 332 | Calmodulin-Dependent Protein Kinase From Rat Length | 2e-54 | ||
| 4fg9_A | 320 | Crystal Structure Of Human Calcium/calmodulin-depen | 3e-54 | ||
| 4fg7_A | 293 | Crystal Structure Of Human Calcium/calmodulin-depen | 4e-54 | ||
| 2vz6_A | 313 | Structure Of Human Calcium Calmodulin Dependent Pro | 4e-54 | ||
| 4fg8_A | 315 | Crystal Structure Of Human Calcium/calmodulin-depen | 4e-54 | ||
| 2wel_A | 327 | Crystal Structure Of Su6656-Bound CalciumCALMODULIN | 6e-54 | ||
| 2vn9_A | 301 | Crystal Structure Of Human Calcium Calmodulin Depen | 3e-53 | ||
| 3soa_A | 444 | Full-Length Human Camkii Length = 444 | 4e-53 | ||
| 3bhh_A | 295 | Crystal Structure Of Human Calcium/calmodulin-depen | 4e-52 | ||
| 2v7o_A | 336 | Crystal Structure Of Human Calcium-Calmodulin-Depen | 8e-52 | ||
| 3ma6_A | 298 | Crystal Structure Of Kinase Domain Of Tgcdpk1 In Pr | 1e-51 | ||
| 3dxn_A | 287 | Crystal Structure Of The Calcium-dependent Kinase F | 2e-51 | ||
| 2jam_A | 304 | Crystal Structure Of Human Calmodulin-Dependent Pro | 5e-51 | ||
| 2bdw_A | 362 | Crystal Structure Of The Auto-Inhibited Kinase Doma | 2e-50 | ||
| 3kl8_A | 269 | Camkiintide Inhibitor Complex Length = 269 | 9e-50 | ||
| 3q5i_A | 504 | Crystal Structure Of Pbanka_031420 Length = 504 | 9e-50 | ||
| 3kk8_A | 284 | Camkii Substrate Complex A Length = 284 | 1e-49 | ||
| 3kk9_A | 282 | Camkii Substrate Complex B Length = 282 | 1e-49 | ||
| 1yrp_A | 278 | Catalytic Domain Of Human Zip Kinase Phosphorylated | 2e-49 | ||
| 3bhy_A | 283 | Crystal Structure Of Human Death Associated Protein | 4e-49 | ||
| 2j90_A | 304 | Crystal Structure Of Human Zip Kinase In Complex Wi | 1e-48 | ||
| 3mfr_A | 351 | Cask-4m Cam Kinase Domain, Native Length = 351 | 5e-48 | ||
| 2w4k_A | 302 | X-Ray Structure Of A Dap-Kinase 2-302 Length = 302 | 8e-48 | ||
| 2xuu_A | 334 | Crystal Structure Of A Dap-Kinase 1 Mutant Length = | 3e-47 | ||
| 2y0a_A | 326 | Structure Of Dapk1 Construct Residues 1-304 Length | 3e-47 | ||
| 2yak_A | 285 | Structure Of Death-Associated Protein Kinase 1 (Dap | 3e-47 | ||
| 2x0g_A | 334 | X-ray Structure Of A Dap-kinase Calmodulin Complex | 4e-47 | ||
| 1wvw_A | 278 | Crystal Structures Of Kinase Domain Of Dap Kinase I | 4e-47 | ||
| 2xzs_A | 312 | Death Associated Protein Kinase 1 Residues 1-312 Le | 5e-47 | ||
| 2w4j_A | 277 | X-Ray Structure Of A Dap-Kinase 2-277 Length = 277 | 5e-47 | ||
| 1ig1_A | 294 | 1.8a X-Ray Structure Of Ternary Complex Of A Cataly | 5e-47 | ||
| 1p4f_A | 293 | Death Associated Protein Kinase Catalytic Domain Wi | 6e-47 | ||
| 3f5u_A | 295 | Crystal Structure Of The Death Associated Protein K | 6e-47 | ||
| 3dfc_B | 295 | Crystal Structure Of A Glycine-Rich Loop Mutant Of | 2e-46 | ||
| 3gu8_A | 295 | Crystal Structure Of Dapkl93g With N6-Cyclopentylad | 2e-46 | ||
| 2y7j_A | 365 | Structure Of Human Phosphorylase Kinase, Gamma 2 Le | 3e-46 | ||
| 3gu4_A | 295 | Crystal Structure Of Dapkq23v-Amppnp Length = 295 | 4e-46 | ||
| 3c0g_A | 351 | Cask Cam-kinase Domain- 3'-amp Complex, P1 Form Len | 1e-45 | ||
| 3tac_A | 361 | Crystal Structure Of The Liprin-AlphaCASK COMPLEX L | 1e-45 | ||
| 2ya9_A | 361 | Crystal Structure Of The Autoinhibited Form Of Mous | 2e-45 | ||
| 2phk_A | 277 | The Crystal Structure Of A Phosphorylase Kinase Pep | 2e-45 | ||
| 1phk_A | 298 | Two Structures Of The Catalytic Domain Of Phosphory | 3e-45 | ||
| 1ql6_A | 298 | The Catalytic Mechanism Of Phosphorylase Kinase Pro | 4e-45 | ||
| 1z9x_A | 321 | Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal | 3e-44 | ||
| 2a27_A | 321 | Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal | 3e-44 | ||
| 1zws_A | 288 | Crystal Structure Of The Catalytic Domain Of Human | 4e-44 | ||
| 2a2a_A | 321 | High-resolution Crystallographic Analysis Of The Au | 4e-44 | ||
| 1wmk_A | 321 | Human Death-Associated Kinase Drp-1, Mutant S308d D | 5e-44 | ||
| 2wnt_A | 330 | Crystal Structure Of The Human Ribosomal Protein S6 | 2e-43 | ||
| 3kn5_A | 325 | Crystal Structure Of The C-Terminal Kinase Domain O | 3e-43 | ||
| 3rny_A | 346 | Crystal Structure Of Human Rsk1 C-Terminal Kinase D | 3e-43 | ||
| 3is5_A | 285 | Crystal Structure Of Cdpk Kinase Domain From Toxopl | 7e-43 | ||
| 2qr8_A | 342 | 2.0a X-ray Structure Of C-terminal Kinase Domain Of | 4e-42 | ||
| 2ycr_A | 323 | Crystal Structure Of Checkpoint Kinase 2 In Complex | 1e-41 | ||
| 2ycf_A | 322 | Crystal Structure Of Checkpoint Kinase 2 In Complex | 1e-41 | ||
| 2w0j_A | 323 | Crystal Structure Of Chk2 In Complex With Nsc 10955 | 1e-41 | ||
| 2xk9_A | 322 | Structural Analysis Of Checkpoint Kinase 2 (Chk2) I | 1e-41 | ||
| 2cn5_A | 329 | Crystal Structure Of Human Chk2 In Complex With Adp | 2e-41 | ||
| 3fhr_A | 336 | High Resolution Crystal Structure Of Mitogen-Activa | 7e-41 | ||
| 3r1n_A | 317 | Mk3 Kinase Bound To Compound 5b Length = 317 | 7e-41 | ||
| 2qr7_A | 342 | 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of | 8e-41 | ||
| 3i6w_A | 443 | Structure And Activation Mechanism Of The Chk2 Dna- | 8e-41 | ||
| 3i6u_A | 419 | Structure And Activation Mechanism Of The Chk2 Dna- | 1e-40 | ||
| 1tki_A | 321 | Autoinhibited Serine Kinase Domain Of The Giant Mus | 2e-40 | ||
| 3ka0_A | 320 | Mk2 Complex With Inhibitor 6-(5-(2-Aminopyrimidin-4 | 3e-39 | ||
| 2onl_C | 406 | Crystal Structure Of The P38a-Mapkap Kinase 2 Heter | 4e-39 | ||
| 1kwp_A | 400 | Crystal Structure Of Mapkap2 Length = 400 | 4e-39 | ||
| 2oza_A | 356 | Structure Of P38alpha Complex Length = 356 | 5e-39 | ||
| 3fpm_A | 325 | Crystal Structure Of A Squarate Inhibitor Bound To | 5e-39 | ||
| 2pzy_A | 324 | Structure Of Mk2 Complexed With Compound 76 Length | 5e-39 | ||
| 2p3g_X | 327 | Crystal Structure Of A Pyrrolopyridine Inhibitor Bo | 5e-39 | ||
| 3r2y_A | 319 | Mk2 Kinase Bound To Compound 1 Length = 319 | 6e-39 | ||
| 2jbo_A | 326 | Protein Kinase Mk2 In Complex With An Inhibitor (Cr | 6e-39 | ||
| 3r2b_A | 318 | Mk2 Kinase Bound To Compound 5b Length = 318 | 6e-39 | ||
| 3gok_A | 334 | Binding Site Mapping Of Protein Ligands Length = 33 | 7e-39 | ||
| 1nxk_A | 400 | Crystal Structure Of Staurosporine Bound To Map Kap | 5e-37 | ||
| 2hw6_A | 307 | Crystal Structure Of Mnk1 Catalytic Domain Length = | 2e-36 | ||
| 1kob_A | 387 | Twitchin Kinase Fragment (Aplysia), Autoregulated P | 2e-36 | ||
| 3daj_A | 272 | Crystal Structure Of Aurora A Complexed With An Inh | 3e-36 | ||
| 2x4f_A | 373 | The Crystal Structure Of The Human Myosin Light Cha | 3e-36 | ||
| 1koa_A | 491 | Twitchin Kinase Fragment (C.Elegans), Autoregulated | 5e-36 | ||
| 3uto_A | 573 | Twitchin Kinase Region From C.Elegans (Fn31-Nl-Kin- | 8e-36 | ||
| 3d14_A | 272 | Crystal Structure Of Mouse Aurora A (Asn186->gly, L | 9e-36 | ||
| 3kga_A | 299 | Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexe | 3e-35 | ||
| 2c6e_A | 283 | Aurora A Kinase Activated Mutant (T287d) In Complex | 6e-35 | ||
| 2c6d_A | 275 | Aurora A Kinase Activated Mutant (T287d) In Complex | 6e-35 | ||
| 2bmc_A | 306 | Aurora-2 T287d T288d Complexed With Pha-680632 Leng | 6e-35 | ||
| 3lau_A | 287 | Crystal Structure Of Aurora2 Kinase In Complex With | 6e-35 | ||
| 3fdn_A | 279 | Structure-Based Drug Design Of Novel Aurora Kinase | 6e-35 | ||
| 2wtw_A | 285 | Aurora-A Inhibitor Structure (2nd Crystal Form) Len | 1e-34 | ||
| 2wtv_A | 285 | Aurora-A Inhibitor Structure Length = 285 | 1e-34 | ||
| 3r21_A | 271 | Design, Synthesis, And Biological Evaluation Of Pyr | 1e-34 | ||
| 2y94_A | 476 | Structure Of An Active Form Of Mammalian Ampk Lengt | 2e-34 | ||
| 3unz_A | 279 | Aurora A In Complex With Rpm1679 Length = 279 | 2e-34 | ||
| 2xru_A | 280 | Aurora-A T288e Complexed With Pha-828300 Length = 2 | 2e-34 | ||
| 1muo_A | 297 | Crystal Structure Of Aurora-2, An Oncogenic Serine- | 2e-34 | ||
| 2j4z_A | 306 | Structure Of Aurora-2 In Complex With Pha-680626 Le | 3e-34 | ||
| 3coh_A | 268 | Crystal Structure Of Aurora-A In Complex With A Pen | 3e-34 | ||
| 2yza_A | 276 | Crystal Structure Of Kinase Domain Of Human 5'-Amp- | 3e-34 | ||
| 2xng_A | 283 | Structure Of Aurora-A Bound To A Selective Imidazop | 3e-34 | ||
| 1ol5_A | 282 | Structure Of Aurora-A 122-403, Phosphorylated On Th | 3e-34 | ||
| 2w1d_A | 275 | Structure Determination Of Aurora Kinase In Complex | 3e-34 | ||
| 2x6d_A | 285 | Aurora-A Bound To An Inhibitor Length = 285 | 4e-34 | ||
| 2w1c_A | 275 | Structure Determination Of Aurora Kinase In Complex | 4e-34 | ||
| 3qbn_A | 281 | Structure Of Human Aurora A In Complex With A Diami | 5e-34 | ||
| 2j50_A | 280 | Structure Of Aurora-2 In Complex With Pha-739358 Le | 5e-34 | ||
| 2dwb_A | 285 | Aurora-A Kinase Complexed With Amppnp Length = 285 | 5e-34 | ||
| 3o50_A | 267 | Crystal Structure Of Benzamide 9 Bound To Auroraa L | 5e-34 | ||
| 3ha6_A | 268 | Crystal Structure Of Aurora A In Complex With Tpx2 | 6e-34 | ||
| 1mq4_A | 272 | Crystal Structure Of Aurora-A Protein Kinase Length | 6e-34 | ||
| 3e5a_A | 268 | Crystal Structure Of Aurora A In Complex With Vx-68 | 6e-34 | ||
| 3nrm_A | 283 | Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibito | 6e-34 | ||
| 3h0y_A | 268 | Aurora A In Complex With A Bisanilinopyrimidine Len | 6e-34 | ||
| 1ol6_A | 282 | Structure Of Unphosphorylated D274n Mutant Of Auror | 1e-33 | ||
| 2wqe_A | 262 | Structure Of S155r Aurora-A Somatic Mutant Length = | 1e-33 | ||
| 2xne_A | 272 | Structure Of Aurora-A Bound To An Imidazopyrazine I | 1e-33 | ||
| 2vrx_A | 285 | Structure Of Aurora B Kinase In Complex With Zm4474 | 2e-33 | ||
| 2h6d_A | 276 | Protein Kinase Domain Of The Human 5'-Amp-Activated | 2e-33 | ||
| 2bfx_B | 284 | Mechanism Of Aurora-B Activation By Incenp And Inhi | 2e-33 | ||
| 2ac5_A | 316 | Structure Of Human Mnk2 Kinase Domain Mutant D228g | 5e-33 | ||
| 3zgw_A | 347 | Crystal Structure Of Maternal Embryonic Leucine Zip | 6e-33 | ||
| 3lm0_A | 327 | Crystal Structure Of Human SerineTHREONINE KINASE 1 | 8e-33 | ||
| 2bfy_A | 284 | Complex Of Aurora-B With Incenp And Hesperidin. Len | 1e-32 | ||
| 2qnj_A | 328 | Kinase And Ubiquitin-Associated Domains Of Mark3PAR | 1e-32 | ||
| 3hko_A | 345 | Crystal Structure Of A Cdpk Kinase Domain From Cryp | 1e-32 | ||
| 2ac3_A | 316 | Structure Of Human Mnk2 Kinase Domain Length = 316 | 2e-32 | ||
| 3iec_A | 319 | Helicobacter Pylori Caga Inhibits Par1MARK FAMILY K | 2e-32 | ||
| 3ujg_A | 361 | Crystal Structure Of Snrk2.6 In Complex With Hab1 L | 2e-32 | ||
| 3uc4_A | 362 | The Crystal Structure Of Snf1-Related Kinase 2.6 Le | 3e-32 | ||
| 3db6_A | 301 | Crystal Structure Of An Activated (Thr->asp) Polo-L | 3e-32 | ||
| 3d5v_A | 317 | Crystal Structure Of An Activated (Thr->asp) Polo-L | 4e-32 | ||
| 3fe3_A | 328 | Crystal Structure Of The Kinase Mark3PAR-1: T211a-S | 4e-32 | ||
| 3zuu_A | 362 | The Structure Of Ost1 (D160a, S175d) Kinase In Comp | 4e-32 | ||
| 1zmu_A | 327 | Catalytic And Ubiqutin-Associated Domains Of Mark2P | 4e-32 | ||
| 4af3_A | 292 | Human Aurora B Kinase In Complex With Incenp And Vx | 4e-32 | ||
| 2wzj_A | 327 | Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82 | 5e-32 | ||
| 2r0i_A | 327 | Crystal Structure Of A Kinase Mark2PAR-1 Mutant Len | 5e-32 | ||
| 3h4j_B | 336 | Crystal Structure Of Pombe Ampk Kdaid Fragment Leng | 5e-32 | ||
| 1zmv_A | 327 | Catalytic And Ubiqutin-Associated Domains Of Mark2P | 9e-32 | ||
| 1fot_A | 318 | Structure Of The Unliganded Camp-Dependent Protein | 1e-31 | ||
| 1zmw_A | 327 | Catalytic And Ubiqutin-Associated Domains Of Mark2P | 1e-31 | ||
| 3zut_A | 362 | The Structure Of Ost1 (D160a) Kinase Length = 362 | 2e-31 | ||
| 3d5u_A | 317 | Crystal Structure Of A Wildtype Polo-Like Kinase 1 | 2e-31 | ||
| 3d5w_A | 317 | Crystal Structure Of A Phosphorylated Polo-Like Kin | 3e-31 | ||
| 3cok_A | 278 | Crystal Structure Of Plk4 Kinase Length = 278 | 4e-31 | ||
| 3udb_A | 317 | Crystal Structure Of Snrk2.6 Length = 317 | 1e-30 | ||
| 3uc3_A | 361 | The Crystal Structure Of Snf1-Related Kinase 2.3 Le | 3e-30 | ||
| 1y8g_A | 327 | Catalytic And Ubiqutin-Associated Domains Of Mark2P | 3e-30 | ||
| 3dae_A | 283 | Crystal Structure Of Phosphorylated Snf1 Kinase Dom | 4e-30 | ||
| 3hyh_A | 275 | Crystal Structure Of The Protein Kinase Domain Of Y | 5e-30 | ||
| 3mn3_A | 271 | An Inhibited Conformation For The Protein Kinase Do | 5e-30 | ||
| 2fh9_A | 274 | Structure And Dimerization Of The Kinase Domain Fro | 5e-30 | ||
| 2hak_A | 328 | Catalytic And Ubiqutin-Associated Domains Of Mark1P | 1e-29 | ||
| 2f2u_A | 402 | Crystal Structure Of The Rho-Kinase Kinase Domain L | 2e-29 | ||
| 3v8s_A | 410 | Human Rho-Associated Protein Kinase 1 (Rock 1) In C | 6e-29 | ||
| 2v55_A | 406 | Mechanism Of Multi-site Phosphorylation From A Rock | 7e-29 | ||
| 2esm_A | 415 | Crystal Structure Of Rock 1 Bound To Fasudil Length | 7e-29 | ||
| 4fsy_A | 279 | Crystal Structure Of The Chk1 Length = 279 | 2e-28 | ||
| 1zys_A | 273 | Co-Crystal Structure Of Checkpoint Kinase Chk1 With | 2e-28 | ||
| 2ydj_A | 276 | Discovery Of Checkpoint Kinase Inhibitor Azd7762 By | 2e-28 | ||
| 2bva_A | 292 | Crystal Structure Of The Human P21-Activated Kinase | 2e-28 | ||
| 4fsz_A | 279 | Crystal Structure Of The Chk1 Length = 279 | 2e-28 | ||
| 3jvr_A | 271 | Characterization Of The Chk1 Allosteric Inhibitor B | 2e-28 | ||
| 3ot3_A | 273 | X-Ray Crystal Structure Of Compound 22k Bound To Hu | 2e-28 | ||
| 2e9v_A | 268 | Structure Of H-Chk1 Complexed With A859017 Length = | 2e-28 | ||
| 2x4z_A | 296 | Crystal Structure Of The Human P21-Activated Kinase | 2e-28 | ||
| 2ayp_A | 269 | Crystal Structure Of Chk1 With An Indol Inhibitor L | 2e-28 | ||
| 4fsn_A | 278 | Crystal Structure Of The Chk1 Length = 278 | 2e-28 | ||
| 2ghg_A | 269 | H-Chk1 Complexed With A431994 Length = 269 | 2e-28 | ||
| 2x8e_A | 276 | Discovery Of A Novel Class Of Triazolones As Checkp | 2e-28 | ||
| 2q0n_A | 301 | Structure Of Human P21 Activating Kinase 4 (Pak4) I | 2e-28 | ||
| 4fsm_A | 279 | Crystal Structure Of The Chk1 Length = 279 | 3e-28 | ||
| 2cdz_A | 303 | Crystal Structure Of The Human P21-Activated Kinase | 3e-28 | ||
| 4fst_A | 269 | Crystal Structure Of The Chk1 Length = 269 | 3e-28 | ||
| 4fsw_A | 279 | Crystal Structure Of The Chk1 Length = 279 | 3e-28 | ||
| 2r0u_A | 323 | Crystal Structure Of Chek1 In Complex With Inhibito | 3e-28 | ||
| 2br1_A | 297 | Structure-Based Design Of Novel Chk1 Inhibitors: In | 3e-28 | ||
| 1ia8_A | 289 | The 1.7 A Crystal Structure Of Human Cell Cycle Che | 3e-28 | ||
| 1zlt_A | 295 | Crystal Structure Of Chk1 Complexed With A Hymenald | 3e-28 | ||
| 4ft3_A | 279 | Crystal Structure Of The Chk1 Length = 279 | 3e-28 | ||
| 1xh9_A | 350 | Crystal Structures Of Protein Kinase B Selective In | 3e-28 | ||
| 3l9m_A | 351 | Crystal Structure Of Pkab3 (Pka Triple Mutant V123a | 4e-28 | ||
| 2hog_A | 322 | Crystal Structure Of Chek1 In Complex With Inhibito | 4e-28 | ||
| 4fif_A | 346 | Catalytic Domain Of Human Pak4 With Rpkplvdp Peptid | 4e-28 | ||
| 4fie_A | 423 | Full-Length Human Pak4 Length = 423 | 6e-28 | ||
| 1q61_A | 350 | Pka Triple Mutant Model Of Pkb Length = 350 | 7e-28 | ||
| 1vzo_A | 355 | The Structure Of The N-Terminal Kinase Domain Of Ms | 7e-28 | ||
| 1smh_A | 350 | Protein Kinase A Variant Complex With Completely Or | 9e-28 | ||
| 3nx8_A | 351 | Human Camp Dependent Protein Kinase In Complex With | 1e-27 | ||
| 4fsu_A | 279 | Crystal Structure Of The Chk1 Length = 279 | 1e-27 | ||
| 3agm_A | 351 | Complex Of Pka With The Bisubstrate Protein Kinase | 1e-27 | ||
| 3agl_A | 351 | Complex Of Pka With The Bisubstrate Protein Kinase | 1e-27 | ||
| 4ae6_A | 343 | Structure And Function Of The Human Sperm-specific | 1e-27 | ||
| 1q24_A | 350 | Pka Double Mutant Model Of Pkb In Complex With Mgat | 2e-27 | ||
| 3mvj_A | 371 | Human Cyclic Amp-Dependent Protein Kinase Pka Inhib | 2e-27 | ||
| 2vo0_A | 351 | Structure Of Pka-Pkb Chimera Complexed With C-(4-(4 | 2e-27 | ||
| 3ama_A | 351 | Protein Kinase A Sixfold Mutant Model Of Aurora B W | 2e-27 | ||
| 2gu8_A | 337 | Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel | 2e-27 | ||
| 2xck_A | 309 | Crystal Structure Of Pdk1 In Complex With A Pyrazol | 2e-27 | ||
| 2jdt_A | 351 | Structure Of Pka-Pkb Chimera Complexed With Isoquin | 2e-27 | ||
| 2c1a_A | 351 | Structure Of Camp-Dependent Protein Kinase Complexe | 2e-27 | ||
| 2f57_A | 317 | Crystal Structure Of The Human P21-activated Kinase | 2e-27 | ||
| 3nax_A | 311 | Pdk1 In Complex With Inhibitor Mp7 Length = 311 | 2e-27 | ||
| 1stc_E | 350 | Camp-Dependent Protein Kinase, Alpha-Catalytic Subu | 2e-27 | ||
| 1svh_A | 350 | Crystal Structure Of Protein Kinase A In Complex Wi | 2e-27 | ||
| 2uzt_A | 336 | Pka Structures Of Akt, Indazole-Pyridine Inhibitors | 2e-27 | ||
| 3dnd_A | 350 | Camp-Dependent Protein Kinase Pka Catalytic Subunit | 2e-27 | ||
| 1ydt_E | 350 | Structure Of Camp-Dependent Protein Kinase, Alpha-C | 3e-27 | ||
| 2f7e_E | 351 | Pka Complexed With (S)-2-(1h-Indol-3-Yl)-1-(5-Isoqu | 3e-27 | ||
| 1syk_A | 350 | Crystal Structure Of E230q Mutant Of Camp-Dependent | 3e-27 | ||
| 2gng_A | 350 | Protein Kinase A Fivefold Mutant Model Of Rho-Kinas | 3e-27 | ||
| 3fhi_A | 350 | Crystal Structure Of A Complex Between The Catalyti | 3e-27 | ||
| 2gnf_A | 350 | Protein Kinase A Fivefold Mutant Model Of Rho-Kinas | 3e-27 | ||
| 2erz_E | 351 | Crystal Structure Of C-amp Dependent Kinase (pka) B | 3e-27 | ||
| 1szm_A | 350 | Dual Binding Mode Of Bisindolylmaleimide 2 To Prote | 3e-27 | ||
| 3nay_A | 311 | Pdk1 In Complex With Inhibitor Mp6 Length = 311 | 3e-27 | ||
| 1bkx_A | 350 | A Binary Complex Of The Catalytic Subunit Of Camp-D | 3e-27 | ||
| 1j3h_A | 350 | Crystal Structure Of Apoenzyme Camp-Dependent Prote | 3e-27 | ||
| 1ctp_E | 350 | Structure Of The Mammalian Catalytic Subunit Of Cam | 3e-27 | ||
| 1fmo_E | 350 | Crystal Structure Of A Polyhistidine-Tagged Recombi | 3e-27 | ||
| 2c30_A | 321 | Crystal Structure Of The Human P21-Activated Kinase | 3e-27 | ||
| 1cmk_E | 350 | Crystal Structures Of The Myristylated Catalytic Su | 3e-27 | ||
| 1cdk_A | 350 | Camp-Dependent Protein Kinase Catalytic Subunit (E. | 4e-27 | ||
| 3nun_A | 292 | Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lea | 4e-27 | ||
| 2qur_A | 350 | Crystal Structure Of F327aK285P MUTANT OF CAMP-Depe | 4e-27 | ||
| 1jbp_E | 350 | Crystal Structure Of The Catalytic Subunit Of Camp- | 4e-27 | ||
| 1z5m_A | 286 | Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrr | 4e-27 | ||
| 2r7b_A | 312 | Crystal Structure Of The Phosphoinositide-Dependent | 4e-27 | ||
| 2xch_A | 309 | Crystal Structure Of Pdk1 In Complex With A Pyrazol | 5e-27 | ||
| 3nus_A | 286 | Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fra | 5e-27 | ||
| 3rwp_A | 311 | Discovery Of A Novel, Potent And Selective Inhibito | 5e-27 | ||
| 1uu3_A | 310 | Structure Of Human Pdk1 Kinase Domain In Complex Wi | 5e-27 | ||
| 4ae9_A | 343 | Structure And Function Of The Human Sperm-specific | 5e-27 | ||
| 3qc4_A | 314 | Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length = | 5e-27 | ||
| 1uu9_A | 286 | Structure Of Human Pdk1 Kinase Domain In Complex Wi | 6e-27 | ||
| 3sc1_A | 311 | Novel Isoquinolone Pdk1 Inhibitors Discovered Throu | 6e-27 | ||
| 2biy_A | 310 | Structure Of Pdk1-S241a Mutant Kinase Domain Length | 6e-27 | ||
| 1h1w_A | 289 | High Resolution Crystal Structure Of The Human Pdk1 | 6e-27 | ||
| 3h9o_A | 311 | Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) | 6e-27 | ||
| 3iop_A | 312 | Pdk-1 In Complex With The Inhibitor Compound-8i Len | 7e-27 | ||
| 4dfy_A | 371 | Crystal Structure Of R194a Mutant Of Camp-Dependent | 7e-27 | ||
| 2uvy_A | 351 | Structure Of Pka-pkb Chimera Complexed With Methyl- | 7e-27 | ||
| 2gnj_A | 350 | Pka Three Fold Mutant Model Of Rho-Kinase With Y-27 | 7e-27 | ||
| 4a07_A | 311 | Human Pdk1 Kinase Domain In Complex With Allosteric | 7e-27 | ||
| 1apm_E | 350 | 2.0 Angstrom Refined Crystal Structure Of The Catal | 7e-27 | ||
| 3o7l_B | 350 | Crystal Structure Of Phospholamban (1-19):pka C-Sub | 7e-27 | ||
| 1q8w_A | 350 | The Catalytic Subunit Of Camp-Dependent Protein Kin | 8e-27 | ||
| 2jds_A | 351 | Structure Of Camp-Dependent Protein Kinase Complexe | 8e-27 | ||
| 3hrc_A | 311 | Crystal Structure Of A Mutant Of Human Pdk1 Kinase | 8e-27 | ||
| 1xh7_A | 350 | Crystal Structures Of Protein Kinase B Selective In | 9e-27 | ||
| 3a60_A | 327 | Crystal Structure Of Unphosphorylated P70s6k1 (Form | 9e-27 | ||
| 3pvb_A | 345 | Crystal Structure Of (73-244)ria:c Holoenzyme Of Ca | 1e-26 | ||
| 3qal_E | 350 | Crystal Structure Of Arg280ala Mutant Of Catalytic | 1e-26 | ||
| 3a62_A | 327 | Crystal Structure Of Phosphorylated P70s6k1 Length | 1e-26 | ||
| 2qcs_A | 350 | A Complex Structure Between The Catalytic And Regul | 1e-26 | ||
| 1l3r_E | 350 | Crystal Structure Of A Transition State Mimic Of Th | 1e-26 | ||
| 3kb7_A | 311 | Crystal Structure Of Polo-Like Kinase 1 In Complex | 1e-26 | ||
| 4dfx_E | 350 | Crystal Structure Of Myristoylated K7c Catalytic Su | 1e-26 | ||
| 4dg3_E | 371 | Crystal Structure Of R336a Mutant Of Camp-dependent | 2e-26 | ||
| 2yac_A | 311 | Crystal Structure Of Polo-Like Kinase 1 In Complex | 2e-26 | ||
| 3pwy_A | 311 | Crystal Structure Of An Extender (Spd28345)-Modifie | 2e-26 | ||
| 2v5q_A | 315 | Crystal Structure Of Wild-type Plk-1 Kinase Domain | 2e-26 | ||
| 3qam_E | 350 | Crystal Structure Of Glu208ala Mutant Of Catalytic | 2e-26 | ||
| 3thb_A | 333 | Structure Of Plk1 Kinase Domain In Complex With A B | 2e-26 | ||
| 3orx_A | 316 | Pdk1 Mutant Bound To Allosteric Disulfide Fragment | 2e-26 | ||
| 2ou7_A | 335 | Structure Of The Catalytic Domain Of Human Polo-Lik | 3e-26 | ||
| 2rku_A | 294 | Structure Of Plk1 In Complex With Bi2536 Length = 2 | 3e-26 | ||
| 1rdq_E | 350 | Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of | 4e-26 | ||
| 2jdo_A | 342 | Structure Of Pkb-Beta (Akt2) Complexed With Isoquin | 6e-26 | ||
| 1o6l_A | 337 | Crystal Structure Of An Activated Akt/protein Kinas | 7e-26 | ||
| 1gzk_A | 315 | Molecular Mechanism For The Regulation Of Protein K | 7e-26 | ||
| 3e87_A | 335 | Crystal Structures Of The Kinase Domain Of Akt2 In | 8e-26 | ||
| 1gzn_A | 335 | Structure Of Pkb Kinase Domain Length = 335 | 8e-26 | ||
| 1o6k_A | 336 | Structure Of Activated Form Of Pkb Kinase Domain S4 | 8e-26 | ||
| 2r5t_A | 373 | Crystal Structure Of Inactive Serum And Glucocortic | 9e-26 | ||
| 1mrv_A | 339 | Crystal Structure Of An Inactive Akt2 Kinase Domain | 9e-26 | ||
| 3g51_A | 325 | Structural Diversity Of The Active Conformation Of | 4e-25 | ||
| 3o96_A | 446 | Crystal Structure Of Human Akt1 With An Allosteric | 4e-25 | ||
| 3ubd_A | 304 | Structure Of N-Terminal Domain Of Rsk2 Kinase In Co | 4e-25 | ||
| 4el9_A | 305 | Structure Of N-Terminal Kinase Domain Of Rsk2 With | 5e-25 | ||
| 4ejn_A | 446 | Crystal Structure Of Autoinhibited Form Of Akt1 In | 5e-25 | ||
| 4gv1_A | 340 | Pkb Alpha In Complex With Azd5363 Length = 340 | 6e-25 | ||
| 3ocb_A | 341 | Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor | 7e-25 | ||
| 3cqu_A | 342 | Crystal Structure Of Akt-1 Complexed With Substrate | 7e-25 | ||
| 3tku_A | 433 | Mrck Beta In Complex With Fasudil Length = 433 | 8e-25 | ||
| 4aw2_A | 437 | Crystal Structure Of Cdc42 Binding Protein Kinase A | 9e-25 | ||
| 3qfv_A | 415 | Mrck Beta In Complex With Tpca-1 Length = 415 | 9e-25 | ||
| 2acx_A | 576 | Crystal Structure Of G Protein Coupled Receptor Kin | 1e-24 | ||
| 3nyn_A | 576 | Crystal Structure Of G Protein-Coupled Receptor Kin | 1e-24 | ||
| 1xws_A | 313 | Crystal Structure Of The Human Pim1 Kinase Domain L | 1e-24 | ||
| 4alv_A | 328 | Benzofuropyrimidinone Inhibitors Of Pim-1 Length = | 1e-24 | ||
| 2xj0_A | 301 | Protein Kinase Pim-1 In Complex With Fragment-4 Fro | 1e-24 | ||
| 1xqz_A | 300 | Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolut | 1e-24 | ||
| 3a99_A | 320 | Structure Of Pim-1 Kinase Crystallized In The Prese | 2e-24 | ||
| 3jpv_A | 313 | Crystal Structure Of Human Proto-Oncogene Serine Th | 3e-24 | ||
| 2bil_B | 313 | The Human Protein Kinase Pim1 In Complex With Its C | 3e-24 | ||
| 3cxw_A | 314 | Crystal Structure Of Human Proto-Oncogene Serine Th | 3e-24 | ||
| 2j2i_B | 312 | Crystal Structure Of The Humab Pim1 In Complex With | 3e-24 | ||
| 2z7q_A | 321 | Crystal Structure Of The N-Terminal Kinase Domain O | 3e-24 | ||
| 3iw4_A | 360 | Crystal Structure Of Pkc Alpha In Complex With Nvp- | 5e-24 | ||
| 3f2a_A | 300 | Crystal Structure Of Human Pim-1 In Complex With Da | 5e-24 | ||
| 3dcv_A | 328 | Crystal Structure Of Human Pim1 Kinase Complexed Wi | 5e-24 | ||
| 2obj_A | 333 | Crystal Structure Of Human Pim-1 Kinase In Complex | 6e-24 | ||
| 1yxs_A | 293 | Crystal Structure Of Kinase Pim1 With P123m Mutatio | 6e-24 | ||
| 3q52_A | 306 | Structure Of Phosphorylated Pak1 Kinase Domain Leng | 6e-24 | ||
| 2xiy_A | 301 | Protein Kinase Pim-1 In Complex With Fragment-2 Fro | 6e-24 | ||
| 1yhv_A | 297 | Crystal Structure Of Pak1 Kinase Domain With Two Po | 6e-24 | ||
| 2xix_A | 301 | Protein Kinase Pim-1 In Complex With Fragment-1 Fro | 7e-24 | ||
| 3uix_A | 298 | Crystal Structure Of Pim1 Kinase In Complex With Sm | 7e-24 | ||
| 3jxw_A | 294 | Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4- | 7e-24 | ||
| 3r00_A | 299 | The Discovery Of Novel Benzofuran-2-Carboxylic Acid | 8e-24 | ||
| 1ywv_A | 293 | Crystal Structures Of Proto-Oncogene Kinase Pim1: A | 8e-24 | ||
| 3cy3_A | 314 | Crystal Structure Of Human Proto-Oncogene Serine Th | 9e-24 | ||
| 2bik_B | 313 | Human Pim1 Phosphorylated On Ser261 Length = 313 | 9e-24 | ||
| 3ma3_A | 313 | Crystal Structure Of Human Proto-Oncogene Serine Th | 1e-23 | ||
| 4dtk_A | 276 | Novel And Selective Pan-Pim Kinase Inhibitor Length | 1e-23 | ||
| 4agu_A | 311 | Crystal Structure Of The Human Cdkl1 Kinase Domain | 1e-23 | ||
| 3fxz_A | 297 | Crystal Structure Of Pak1 Kinase Domain With Ruthen | 1e-23 | ||
| 1f3m_C | 297 | Crystal Structure Of Human SerineTHREONINE KINASE P | 1e-23 | ||
| 3c4e_A | 273 | Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7 | 2e-23 | ||
| 4apc_A | 350 | Crystal Structure Of Human Nima-Related Kinase 1 (N | 2e-23 | ||
| 3q4z_A | 306 | Structure Of Unphosphorylated Pak1 Kinase Domain Le | 2e-23 | ||
| 4as0_A | 273 | Cyclometalated Phthalimides As Protein Kinase Inhib | 2e-23 | ||
| 4a7c_A | 308 | Crystal Structure Of Pim1 Kinase With Etp46546 Leng | 3e-23 | ||
| 1yhs_A | 273 | Crystal Structure Of Pim-1 Bound To Staurosporine L | 5e-23 | ||
| 3txo_A | 353 | Pkc Eta Kinase In Complex With A Naphthyridine Leng | 7e-23 | ||
| 1xjd_A | 345 | Crystal Structure Of Pkc-Theta Complexed With Staur | 2e-22 | ||
| 2jed_A | 352 | The Crystal Structure Of The Kinase Domain Of The P | 4e-22 | ||
| 2zv2_A | 298 | Crystal Structure Of Human CalciumCALMODULIN-Depend | 4e-22 | ||
| 3com_A | 314 | Crystal Structure Of Mst1 Kinase Length = 314 | 4e-22 | ||
| 2iwi_A | 312 | Crystal Structure Of The Human Pim2 In Complex With | 5e-22 | ||
| 4a4x_A | 279 | Nek2-Ede Bound To Cct248662 Length = 279 | 1e-21 | ||
| 1zrz_A | 364 | Crystal Structure Of The Catalytic Domain Of Atypic | 2e-21 | ||
| 2w5a_A | 279 | Human Nek2 Kinase Adp-Bound Length = 279 | 2e-21 | ||
| 2jav_A | 279 | Human Kinase With Pyrrole-Indolinone Ligand Length | 2e-21 | ||
| 4dc2_A | 396 | Structure Of Pkc In Complex With A Substrate Peptid | 2e-21 | ||
| 3zh8_A | 349 | A Novel Small Molecule Apkc Inhibitor Length = 349 | 3e-21 | ||
| 2i0e_A | 353 | Structure Of Catalytic Domain Of Human Protein Kina | 3e-21 | ||
| 3a8w_A | 345 | Crystal Structure Of Pkciota Kinase Domain Length = | 3e-21 | ||
| 3krw_A | 688 | Human Grk2 In Complex With Gbetgamma Subunits And B | 5e-21 | ||
| 3pfq_A | 674 | Crystal Structure And Allosteric Activation Of Prot | 5e-21 | ||
| 3cik_A | 689 | Human Grk2 In Complex With Gbetagamma Subunits Leng | 5e-21 | ||
| 1omw_A | 689 | Crystal Structure Of The Complex Between G Protein- | 6e-21 | ||
| 3psc_A | 695 | Bovine Grk2 In Complex With Gbetagamma Subunits Len | 6e-21 | ||
| 4alu_A | 328 | Benzofuropyrimidinone Inhibitors Of Pim-1 Length = | 1e-20 | ||
| 4fr4_A | 384 | Crystal Structure Of Human SerineTHREONINE-Protein | 2e-20 | ||
| 3ckw_A | 304 | Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3 | 3e-20 | ||
| 3ckx_A | 304 | Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3 | 3e-20 | ||
| 3a7f_A | 303 | Human Mst3 Kinase Length = 303 | 4e-20 | ||
| 4eqm_A | 294 | Structural Analysis Of Staphylococcus Aureus Serine | 1e-19 | ||
| 1v0o_A | 288 | Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulpho | 2e-19 | ||
| 1v0b_A | 288 | Crystal Structure Of The T198a Mutant Of Pfpk5 Leng | 2e-19 | ||
| 1ob3_A | 288 | Structure Of P. Falciparum Pfpk5 Length = 288 | 3e-19 | ||
| 2b9h_A | 353 | Crystal Structure Of Fus3 With A Docking Motif From | 4e-19 | ||
| 2f9g_A | 353 | Crystal Structure Of Fus3 Phosphorylated On Tyr182 | 4e-19 | ||
| 2b9f_A | 353 | Crystal Structure Of Non-Phosphorylated Fus3 Length | 4e-19 | ||
| 2xik_A | 294 | Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related K | 5e-19 | ||
| 3zhp_C | 294 | Human Mst3 (stk24) In Complex With Mo25beta Length | 5e-19 | ||
| 4aaa_A | 331 | Crystal Structure Of The Human Cdkl2 Kinase Domain | 9e-19 | ||
| 2vwi_A | 303 | Structure Of The Osr1 Kinase, A Hypertension Drug T | 1e-18 | ||
| 3dak_A | 290 | Crystal Structure Of Domain-Swapped Osr1 Kinase Dom | 2e-18 | ||
| 1tvo_A | 368 | The Structure Of Erk2 In Complex With A Small Molec | 3e-18 | ||
| 4h3q_A | 362 | Crystal Structure Of Human Erk2 Complexed With A Ma | 3e-18 | ||
| 4fv7_A | 360 | Crystal Structure Of The Erk2 Complexed With E94 Le | 3e-18 | ||
| 3sa0_A | 360 | Complex Of Erk2 With Norathyriol Length = 360 | 3e-18 | ||
| 4fux_A | 360 | Crystal Structure Of The Erk2 Complexed With E75 Le | 4e-18 | ||
| 3gbz_A | 329 | Structure Of The Cmgc Cdk Kinase From Giardia Lambl | 4e-18 | ||
| 1pme_A | 380 | Structure Of Penta Mutant Human Erk2 Map Kinase Com | 4e-18 | ||
| 3t8o_A | 543 | Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolu | 4e-18 | ||
| 3qc9_A | 543 | Crystal Structure Of Cross-Linked Bovine Grk1 T8cN4 | 4e-18 | ||
| 3c4x_A | 543 | Crystal Structure Of G Protein Coupled Receptor Kin | 4e-18 | ||
| 3c4w_A | 543 | Crystal Structure Of G Protein Coupled Receptor Kin | 4e-18 | ||
| 3dls_A | 335 | Crystal Structure Of Human Pas Kinase Bound To Adp | 5e-18 | ||
| 2vd5_A | 412 | Structure Of Human Myotonic Dystrophy Protein Kinas | 5e-18 | ||
| 3qyw_A | 364 | Crystal Structure Of Erk2 In Complex With An Inhibi | 5e-18 | ||
| 4fv6_A | 360 | Crystal Structure Of The Erk2 Complexed With E57 Le | 5e-18 | ||
| 1wzy_A | 368 | Crystal Structure Of Human Erk2 Complexed With A Py | 5e-18 | ||
| 2y9q_A | 362 | Crystal Structure Of Human Erk2 Complexed With A Ma | 6e-18 | ||
| 3r63_A | 358 | Structure Of Erk2 (Spe) Mutant (S246e) Length = 358 | 6e-18 | ||
| 4gsb_A | 364 | Monoclinic Crystal Form Of The Apo-Erk2 Length = 36 | 7e-18 | ||
| 2ojg_A | 380 | Crystal Structure Of Erk2 In Complex With N,n-dimet | 7e-18 | ||
| 3o71_A | 358 | Crystal Structure Of Erk2DCC PEPTIDE COMPLEX Length | 7e-18 | ||
| 3zuv_A | 364 | Crystal Structure Of A Designed Selected Ankyrin Re | 7e-18 | ||
| 2erk_A | 365 | Phosphorylated Map Kinase Erk2 Length = 365 | 7e-18 | ||
| 3zu7_A | 365 | Crystal Structure Of A Designed Selected Ankyrin Re | 7e-18 | ||
| 2z7l_A | 366 | Unphosphorylated Mitogen Activated Protein Kinase E | 7e-18 | ||
| 3c9w_A | 357 | Crystal Structure Of Erk-2 With Hypothemycin Covale | 7e-18 | ||
| 2fys_B | 364 | Crystal Structure Of Erk2 Complex With Kim Peptide | 7e-18 | ||
| 3tei_A | 362 | Crystal Structure Of Human Erk2 Complexed With A Ma | 8e-18 | ||
| 3sdj_A | 448 | Structure Of Rnase-Inactive Point Mutant Of Oligome | 1e-17 | ||
| 3fbv_A | 448 | Crystal Structure Of The Oligomer Formed By The Kin | 1e-17 | ||
| 2gph_A | 364 | Docking Motif Interactions In The Map Kinase Erk2 L | 1e-17 | ||
| 1gol_A | 364 | Coordinates Of Rat Map Kinase Erk2 With An Arginine | 2e-17 | ||
| 1na7_A | 329 | Crystal Structure Of The Catalytic Subunit Of Human | 2e-17 | ||
| 3e3p_A | 360 | Glycogen Synthase Kinase From Leishmania Major Leng | 2e-17 | ||
| 3lj0_A | 434 | Ire1 Complexed With Adp And Quercetin Length = 434 | 3e-17 | ||
| 1zy4_A | 303 | Crystal Structure Of Eif2alpha Protein Kinase Gcn2: | 3e-17 | ||
| 2rio_A | 434 | Structure Of The Dual Enzyme Ire1 Reveals The Basis | 3e-17 | ||
| 2zoq_A | 382 | Structural Dissection Of Human Mitogen-Activated Ki | 4e-17 | ||
| 2gcd_A | 309 | Tao2 Kinase Domain-Staurosporine Structure Length = | 4e-17 | ||
| 1u5q_A | 348 | Crystal Structure Of The Tao2 Kinase Domain: Activa | 4e-17 | ||
| 3ggf_A | 301 | Crystal Structure Of Human SerineTHREONINE-Protein | 5e-17 | ||
| 2j51_A | 325 | Crystal Structure Of Human Ste20-Like Kinase Bound | 6e-17 | ||
| 2jfm_A | 325 | Crystal Structure Of Human Ste20-Like Kinase (Unlig | 7e-17 | ||
| 2jfl_A | 325 | Crystal Structure Of Human Ste20-Like Kinase ( Diph | 7e-17 | ||
| 2wtk_C | 305 | Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo2 | 7e-17 | ||
| 4e7w_A | 394 | Structure Of Gsk3 From Ustilago Maydis Length = 394 | 9e-17 | ||
| 2wqm_A | 310 | Structure Of Apo Human Nek7 Length = 310 | 2e-16 | ||
| 3niz_A | 311 | Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5 | 2e-16 | ||
| 2qkr_A | 313 | Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5 | 2e-16 | ||
| 1zyc_A | 303 | Crystal Structure Of Eif2alpha Protein Kinase Gcn2: | 3e-16 | ||
| 2uv2_A | 287 | Crystal Structure Of Human Ste20-Like Kinase Bound | 3e-16 | ||
| 4bc6_A | 293 | Crystal Structure Of Human Serine Threonine Kinase- | 3e-16 | ||
| 2j7t_A | 302 | Crystal Structure Of Human Serine Threonine Kinase- | 3e-16 | ||
| 3p23_A | 432 | Crystal Structure Of The Human Kinase And Rnase Dom | 4e-16 | ||
| 3f61_A | 311 | Crystal Structure Of M. Tuberculosis Pknb Leu33aspV | 6e-16 | ||
| 3orm_A | 311 | Mycobacterium Tuberculosis Pknb Kinase Domain D76a | 8e-16 | ||
| 3f69_A | 311 | Crystal Structure Of The Mycobacterium Tuberculosis | 8e-16 | ||
| 2clq_A | 295 | Structure Of Mitogen-Activated Protein Kinase Kinas | 9e-16 | ||
| 3ori_A | 311 | Mycobacterium Tuberculosis Pknb Kinase Domain L33d | 1e-15 | ||
| 1mru_A | 311 | Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycob | 1e-15 | ||
| 3vw6_A | 269 | Crystal Structure Of Human Apoptosis Signal-Regulat | 2e-15 | ||
| 1o6y_A | 299 | Catalytic Domain Of Pknb Kinase From Mycobacterium | 2e-15 | ||
| 3eb0_A | 383 | Crystal Structure Of Cgd4_240 From Cryptosporidium | 3e-15 | ||
| 1zxe_A | 303 | Crystal Structure Of Eif2alpha Protein Kinase Gcn2: | 3e-15 | ||
| 4eut_A | 396 | Structure Of Bx-795 Complexed With Unphosphorylated | 4e-15 | ||
| 1ua2_A | 346 | Crystal Structure Of Human Cdk7 Length = 346 | 4e-15 | ||
| 3rzf_A | 677 | Crystal Structure Of Inhibitor Of Kappab Kinase Bet | 6e-15 | ||
| 3qa8_A | 676 | Crystal Structure Of Inhibitor Of Kappa B Kinase Be | 6e-15 | ||
| 4euu_A | 319 | Structure Of Bx-795 Complexed With Human Tbk1 Kinas | 6e-15 | ||
| 4dn5_A | 356 | Crystal Structure Of Nf-kb-inducing Kinase (nik) Le | 2e-14 | ||
| 3orn_A | 307 | Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In | 3e-14 | ||
| 3f88_A | 349 | Glycogen Synthase Kinase 3beta Inhibitor Complex Le | 3e-14 | ||
| 4eoi_A | 299 | Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyc | 4e-14 | ||
| 3u87_A | 349 | Structure Of A Chimeric Construct Of Human Ck2alpha | 4e-14 | ||
| 4g31_A | 299 | Crystal Structure Of Gsk6414 Bound To Perk (R587-R1 | 4e-14 | ||
| 3oz6_A | 388 | Crystal Structure Of Mapk From Cryptosporidium Parv | 5e-14 | ||
| 1gng_A | 378 | Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With | 5e-14 | ||
| 3zrk_A | 371 | Identification Of 2-(4-Pyridyl)thienopyridinones As | 5e-14 | ||
| 3f7z_A | 350 | X-ray Co-crystal Structure Of Glycogen Synthase Kin | 5e-14 | ||
| 4an2_A | 301 | Crystal Structures Of Human Mek1 With Carboxamide-B | 5e-14 | ||
| 3gb2_A | 353 | Gsk3beta Inhibitor Complex Length = 353 | 5e-14 | ||
| 4afj_A | 367 | 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selec | 5e-14 | ||
| 3zdi_A | 350 | Glycogen Synthase Kinase 3 Beta Complexed With Axin | 5e-14 | ||
| 3sd0_A | 350 | Identification Of A Glycogen Synthase Kinase-3b Inh | 5e-14 | ||
| 1h4l_A | 292 | Structure And Regulation Of The Cdk5-P25(Nck5a) Com | 5e-14 | ||
| 4dit_A | 382 | Crystal Structure Of Gsk3beta In Complex With A Imi | 6e-14 | ||
| 1q5k_A | 414 | Crystal Structure Of Glycogen Synthase Kinase 3 In | 6e-14 | ||
| 2ow3_A | 352 | Glycogen Synthase Kinase-3 Beta In Complex With Bis | 6e-14 | ||
| 1r0e_A | 391 | Glycogen Synthase Kinase-3 Beta In Complex With 3-I | 6e-14 | ||
| 2o5k_A | 372 | Crystal Structure Of Gsk3beta In Complex With A Ben | 6e-14 | ||
| 3e7o_A | 360 | Crystal Structure Of Jnk2 Length = 360 | 6e-14 | ||
| 3npc_A | 364 | Crystal Structure Of Jnk2 Complexed With Birb796 Le | 6e-14 | ||
| 3say_A | 430 | Crystal Structure Of Human Glycogen Synthase Kinase | 6e-14 | ||
| 3sls_A | 304 | Crystal Structure Of Human Mek-1 Kinase In Complex | 6e-14 | ||
| 1i09_A | 420 | Structure Of Glycogen Synthase Kinase-3 (Gsk3b) Len | 7e-14 | ||
| 1pyx_A | 422 | Gsk-3 Beta Complexed With Amp-Pnp Length = 422 | 7e-14 | ||
| 2pml_X | 348 | Crystal Structure Of Pfpk7 In Complex With An Atp A | 8e-14 | ||
| 1ung_A | 292 | Structural Mechanism For The Inhibition Of Cdk5-P25 | 8e-14 | ||
| 4acc_A | 465 | Gsk3b In Complex With Inhibitor Length = 465 | 8e-14 | ||
| 3dbq_A | 343 | Crystal Structure Of Ttk Kinase Domain Length = 343 | 8e-14 | ||
| 1q3d_A | 424 | Gsk-3 Beta Complexed With Staurosporine Length = 42 | 9e-14 | ||
| 3h30_A | 334 | Crystal Structure Of The Catalytic Subunit Of Human | 9e-14 | ||
| 3nga_A | 333 | Human Ck2 Catalytic Domain In Complex With Cx-4945 | 9e-14 | ||
| 3h9f_A | 313 | Crystal Structure Of Human Dual Specificity Protein | 9e-14 | ||
| 3hmn_A | 342 | Crystal Structure Of Human Mps1 Catalytic Domain In | 1e-13 | ||
| 3bqc_A | 335 | High Ph-Value Crystal Structure Of Emodin In Comple | 1e-13 | ||
| 3juh_A | 335 | Crystal Structure Of A Mutant Of Human Protein Kina | 1e-13 | ||
| 3mb6_A | 331 | Human Ck2 Catalytic Domain In Complex With A Difura | 1e-13 | ||
| 2zmc_A | 390 | Crystal Structure Of Human Mitotic Checkpoint Kinas | 1e-13 | ||
| 2x9e_A | 317 | Human Mps1 In Complex With Nms-P715 Length = 317 | 1e-13 | ||
| 2r7i_A | 335 | Crystal Structure Of Catalytic Subunit Of Protein K | 1e-13 | ||
| 3cek_A | 313 | Crystal Structure Of Human Dual Specificity Protein | 1e-13 | ||
| 3nsz_A | 330 | Human Ck2 Catalytic Domain In Complex With Amppn Le | 1e-13 | ||
| 2zmd_A | 390 | Crystal Structure Of Human Mps1 Catalytic Domain T6 | 1e-13 | ||
| 1jwh_A | 337 | Crystal Structure Of Human Protein Kinase Ck2 Holoe | 1e-13 | ||
| 3q9w_A | 336 | Crystal Structure Of Human Ck2 Alpha In Complex Wit | 1e-13 | ||
| 1pjk_A | 334 | Crystal Structure Of A C-terminal Deletion Mutant O | 1e-13 | ||
| 3q04_A | 328 | Crystal Structure Of The Apo-Form Of Human Ck2 Alph | 1e-13 | ||
| 4g3d_A | 371 | Crystal Structure Of Human Nf-kappab Inducing Kinas | 1e-13 | ||
| 4dgl_C | 335 | Crystal Structure Of The Ck2 Tetrameric Holoenzyme | 1e-13 | ||
| 4eok_A | 300 | Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma | 1e-13 | ||
| 2i6l_A | 320 | Crystal Structure Of Human Mitogen Activated Protei | 1e-13 | ||
| 1uv5_A | 350 | Glycogen Synthase Kinase 3 Beta Complexed With 6-Br | 1e-13 | ||
| 2zjw_A | 340 | Crystal Structure Of Human Ck2 Alpha Complexed With | 1e-13 | ||
| 3ofm_A | 350 | Structure Of A Human Ck2alpha Prime, The Paralog Is | 1e-13 | ||
| 4eoj_A | 302 | Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma | 1e-13 | ||
| 1cm8_A | 367 | Phosphorylated Map Kinase P38-Gamma Length = 367 | 1e-13 | ||
| 3vqu_A | 320 | Crystal Structure Of Human Mps1 Catalytic Domain In | 1e-13 | ||
| 2in6_A | 287 | Wee1 Kinase Complex With Inhibitor Pd311839 Length | 2e-13 | ||
| 1h8f_A | 352 | Glycogen Synthase Kinase 3 Beta. Length = 352 | 2e-13 | ||
| 1x8b_A | 289 | Structure Of Human Wee1a Kinase: Kinase Domain Comp | 2e-13 | ||
| 1o9u_A | 350 | Glycogen Synthase Kinase 3 Beta Complexed With Axin | 2e-13 | ||
| 2z2w_A | 285 | Humand Wee1 Kinase Complexed With Inhibitor Pf03357 | 2e-13 | ||
| 3bi6_A | 287 | Wee1 Kinase Complex With Inhibitor Pd352396 Length | 2e-13 | ||
| 3vul_A | 370 | Crystal Structure Of A Cysteine-deficient Mutant M1 | 2e-13 | ||
| 3vum_A | 370 | Crystal Structure Of A Cysteine-deficient Mutant M7 | 2e-13 | ||
| 4eoo_A | 299 | Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 | 3e-13 | ||
| 4eop_A | 300 | Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 | 3e-13 | ||
| 3ll6_A | 337 | Crystal Structure Of The Human Cyclin G Associated | 3e-13 | ||
| 1oit_A | 299 | Imidazopyridines: A Potent And Selective Class Of C | 3e-13 | ||
| 2pk9_A | 317 | Structure Of The Pho85-pho80 Cdk-cyclin Complex Of | 3e-13 | ||
| 4eon_A | 300 | Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum | 4e-13 | ||
| 4eom_A | 301 | Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum | 4e-13 | ||
| 1gz8_A | 299 | Human Cyclin Dependent Kinase 2 Complexed With The | 4e-13 | ||
| 2jgz_A | 289 | Crystal Structure Of Phospho-Cdk2 In Complex With C | 4e-13 | ||
| 1z57_A | 339 | Crystal Structure Of Human Clk1 In Complex With 10z | 5e-13 | ||
| 4erw_A | 306 | Cdk2 In Complex With Staurosporine Length = 306 | 5e-13 | ||
| 3ezr_A | 300 | Cdk-2 With Indazole Inhibitor 17 Bound At Its Activ | 5e-13 | ||
| 3bht_A | 300 | Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN | 5e-13 | ||
| 1jst_A | 298 | Phosphorylated Cyclin-Dependent Kinase-2 Bound To C | 5e-13 | ||
| 1e9h_A | 297 | Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex | 5e-13 | ||
| 1ogu_A | 302 | Structure Of Human Thr160-phospho Cdk2/cyclin A Com | 5e-13 | ||
| 3qhr_A | 298 | Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic | 5e-13 | ||
| 4eoq_A | 301 | Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co | 5e-13 | ||
| 4bcq_A | 301 | Structure Of Cdk2 In Complex With Cyclin A And A 2- | 5e-13 | ||
| 4i3z_A | 296 | Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNES | 5e-13 | ||
| 1qmz_A | 299 | Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Com | 5e-13 | ||
| 1w98_A | 298 | The Structural Basis Of Cdk2 Activation By Cyclin E | 6e-13 | ||
| 4eos_A | 300 | Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co | 6e-13 | ||
| 3pj8_A | 299 | Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D] | 6e-13 | ||
| 1h1p_A | 303 | Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMP | 6e-13 | ||
| 1pf8_A | 298 | Crystal Structure Of Human Cyclin-dependent Kinase | 6e-13 | ||
| 2w17_A | 299 | Cdk2 In Complex With The Imidazole Pyrimidine Amide | 6e-13 | ||
| 1fin_A | 298 | Cyclin A-Cyclin-Dependent Kinase 2 Complex Length = | 6e-13 | ||
| 2iw6_A | 302 | Structure Of Human Thr160-Phospho Cdk2-Cyclin A Com | 6e-13 | ||
| 1vyw_A | 309 | Structure Of Cdk2CYCLIN A WITH PNU-292137 Length = | 7e-13 | ||
| 3pxf_A | 306 | Cdk2 In Complex With Two Molecules Of 8-Anilino-1-N | 7e-13 | ||
| 3fi3_A | 364 | Crystal Structure Of Jnk3 With Indazole Inhibitor, | 8e-13 | ||
| 4bcf_A | 331 | Structure Of Cdk9 In Complex With Cyclin T And A 2- | 8e-13 | ||
| 3kvx_A | 364 | Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562 Le | 8e-13 | ||
| 3vuk_A | 370 | Crystal Structure Of A Cysteine-deficient Mutant M5 | 8e-13 | ||
| 1bi8_A | 326 | Mechanism Of G1 Cyclin Dependent Kinase Inhibition | 9e-13 | ||
| 3vui_A | 370 | Crystal Structure Of A Cysteine-deficient Mutant M2 | 9e-13 | ||
| 3ttj_A | 464 | Crystal Structure Of Jnk3 Complexed With Cc-359, A | 9e-13 | ||
| 3gc9_A | 370 | The Structure Of P38beta C119s, C162s In Complex Wi | 1e-12 | ||
| 3fv8_A | 355 | Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774 Le | 1e-12 | ||
| 2iw8_A | 302 | Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82 | 1e-12 | ||
| 2r9s_A | 356 | C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Qu | 1e-12 | ||
| 1jnk_A | 423 | The C-Jun N-Terminal Kinase (Jnk3s) Complexed With | 1e-12 | ||
| 4ec8_A | 373 | Structure Of Full Length Cdk9 In Complex With Cycli | 1e-12 | ||
| 3mi9_A | 351 | Crystal Structure Of Hiv-1 Tat Complexed With Human | 1e-12 | ||
| 2ok1_A | 365 | Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3 | 1e-12 | ||
| 2vag_A | 339 | Crystal Structure Of Di-Phosphorylated Human Clk1 I | 1e-12 | ||
| 3blh_A | 331 | Crystal Structure Of Human Cdk9CYCLINT1 Length = 33 | 1e-12 | ||
| 3oxi_A | 362 | Design And Synthesis Of Disubstituted Thiophene And | 1e-12 | ||
| 2o0u_A | 364 | Crystal Structure Of Human Jnk3 Complexed With N-{3 | 1e-12 | ||
| 1jow_B | 308 | Crystal Structure Of A Complex Of Human Cdk6 And A | 1e-12 | ||
| 3ptg_A | 363 | Design And Synthesis Of A Novel, Orally Efficacious | 1e-12 | ||
| 3fi2_A | 353 | Crystal Structure Of Jnk3 With Amino-Pyrazole Inhib | 1e-12 | ||
| 1pmn_A | 364 | Crystal Structure Of Jnk3 In Complex With An Imidaz | 1e-12 | ||
| 2b1p_A | 355 | Inhibitor Complex Of Jnk3 Length = 355 | 1e-12 | ||
| 2exc_X | 356 | Inhibitor Complex Of Jnk3 Length = 356 | 1e-12 | ||
| 1gii_A | 298 | Human Cyclin Dependent Kinase 2 Complexed With The | 1e-12 | ||
| 3gp0_A | 348 | Crystal Structure Of Human Mitogen Activated Protei | 1e-12 | ||
| 3odz_X | 360 | Crystal Structure Of P38alpha Y323r Active Mutant L | 1e-12 | ||
| 3e3b_X | 339 | Crystal Structure Of Catalytic Subunit Of Human Pro | 2e-12 | ||
| 4h36_A | 356 | Crystal Structure Of Jnk3 In Complex With Atf2 Pept | 2e-12 | ||
| 3gc8_A | 370 | The Structure Of P38beta C162s In Complex With A Di | 2e-12 | ||
| 3nup_A | 307 | Cdk6 (Monomeric) In Complex With Inhibitor Length = | 2e-12 | ||
| 1oir_A | 299 | Imidazopyridines: A Potent And Selective Class Of C | 2e-12 | ||
| 1h01_A | 298 | Cdk2 In Complex With A Disubstituted 2, 4-Bis Anili | 2e-12 | ||
| 3vuh_A | 370 | Crystal Structure Of A Cysteine-deficient Mutant M3 | 2e-12 | ||
| 1ywr_A | 360 | Crystal Structure Analysis Of Inactive P38 Kinase D | 3e-12 | ||
| 2w99_B | 306 | Crystal Structure Of Cdk4 In Complex With A D-Type | 4e-12 | ||
| 1yw2_A | 360 | Mutated Mus Musculus P38 Kinase (Mp38) Length = 360 | 4e-12 | ||
| 2w96_B | 306 | Crystal Structure Of Cdk4 In Complex With A D-Type | 4e-12 | ||
| 2aao_A | 166 | Regulatory Apparatus Of Calcium Dependent Protein K | 4e-12 | ||
| 2aao_A | 166 | Regulatory Apparatus Of Calcium Dependent Protein K | 4e-05 | ||
| 2eva_A | 307 | Structural Basis For The Interaction Of Tak1 Kinase | 4e-12 | ||
| 3mtl_A | 324 | Crystal Structure Of The Pctaire1 Kinase In Complex | 4e-12 | ||
| 4gs6_A | 315 | Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxoz | 5e-12 | ||
| 2oza_B | 366 | Structure Of P38alpha Complex Length = 366 | 5e-12 | ||
| 3ody_X | 360 | Crystal Structure Of P38alpha Y323q Active Mutant L | 5e-12 | ||
| 2w9f_B | 306 | Crystal Structure Of Cdk4 In Complex With A D-Type | 5e-12 | ||
| 1lew_A | 360 | Crystal Structure Of Map Kinase P38 Complexed To Th | 5e-12 | ||
| 3fi4_A | 372 | P38 Kinase Crystal Structure In Complex With Ro4499 | 5e-12 | ||
| 2puu_A | 348 | Crystal Structure Of P38 Complex With 1-(5-Tert-But | 5e-12 | ||
| 2ghl_A | 348 | Mutant Mus Musculus P38 Kinase Domain In Complex Wi | 6e-12 | ||
| 3p1a_A | 311 | Structure Of Human Membrane-Associated Tyrosine- An | 6e-12 | ||
| 3d7z_A | 360 | Crystal Structure Of P38 Kinase In Complex With A B | 6e-12 | ||
| 3coi_A | 353 | Crystal Structure Of P38delta Kinase Length = 353 | 6e-12 | ||
| 3p4k_A | 370 | The Third Conformation Of P38a Map Kinase Observed | 6e-12 | ||
| 3k2l_A | 429 | Crystal Structure Of Dual-Specificity Tyrosine Phos | 6e-12 | ||
| 3tg1_A | 380 | Crystal Structure Of P38alpha In Complex With A Map | 6e-12 | ||
| 3vug_A | 370 | Crystal Structure Of A Cysteine-deficient Mutant M2 | 6e-12 | ||
| 1bmk_A | 379 | The Complex Structure Of The Map Kinase P38SB218655 | 6e-12 | ||
| 4exu_A | 371 | Mapk13, Inactive Form Length = 371 | 7e-12 | ||
| 3d83_A | 360 | Crystal Structure Of P38 Kinase In Complex With A B | 7e-12 | ||
| 3kvw_A | 429 | Crystal Structure Of Dual-Specificity Tyrosine Phos | 7e-12 | ||
| 2y8o_A | 362 | Crystal Structure Of Human P38alpha Complexed With | 8e-12 | ||
| 1ove_A | 366 | The Structure Of P38 Alpha In Complex With A Dihydr | 8e-12 | ||
| 3py3_A | 380 | Crystal Structure Of Phosphorylated P38alpha Map Ki | 8e-12 | ||
| 3od6_X | 360 | Crystal Structure Of P38alpha Y323t Active Mutant L | 8e-12 | ||
| 4azf_A | 417 | Human Dyrk2 In Complex With Leucettine L41 Length = | 8e-12 | ||
| 2gtm_A | 348 | Mutated Mouse P38 Map Kinase Domain In Complex With | 9e-12 | ||
| 3g33_A | 308 | Crystal Structure Of Cdk4CYCLIN D3 Length = 308 | 9e-12 | ||
| 4e5a_X | 360 | The W197a Mutant Of P38a Map Kinase Length = 360 | 1e-11 | ||
| 1ian_A | 366 | Human P38 Map Kinase Inhibitor Complex Length = 366 | 1e-11 | ||
| 1m7q_A | 366 | Crystal Structure Of P38 Map Kinase In Complex With | 1e-11 | ||
| 3zsg_A | 362 | X-Ray Structure Of P38alpha Bound To Tak-715 Length | 1e-11 | ||
| 3gcu_A | 360 | Human P38 Map Kinase In Complex With Rl48 Length = | 1e-11 | ||
| 3k3j_A | 362 | P38alpha Bound To Novel Dfg-Out Compound Pf-0041612 | 1e-11 | ||
| 2npq_A | 367 | A Novel Lipid Binding Site In The P38 Alpha Map Kin | 1e-11 | ||
| 3mpt_A | 371 | Crystal Structure Of P38 Kinase In Complex With A P | 1e-11 | ||
| 1di9_A | 360 | The Structure Of P38 Mitogen-Activated Protein Kina | 1e-11 | ||
| 1oz1_A | 372 | P38 Mitogen-Activated Kinase In Complex With 4-Azai | 1e-11 | ||
| 2gfs_A | 372 | P38 Kinase Crystal Structure In Complex With Ro3201 | 1e-11 | ||
| 2baq_A | 365 | P38alpha Bound To Ro3201195 Length = 365 | 1e-11 | ||
| 2baj_A | 365 | P38alpha Bound To Pyrazolourea Length = 365 | 1e-11 | ||
| 4ewq_A | 383 | Human P38 Alpha Mapk In Complex With A Pyridazine B | 1e-11 | ||
| 3hrb_A | 359 | P38 Kinase Crystal Structure In Complex With Small | 1e-11 | ||
| 3vud_A | 370 | Crystal Structure Of A Cysteine-deficient Mutant M1 | 1e-11 | ||
| 3dt1_A | 383 | P38 Complexed With A Quinazoline Inhibitor Length = | 1e-11 | ||
| 3e92_A | 371 | Crystal Structure Of P38 Kinase In Complex With A B | 1e-11 | ||
| 1bl6_A | 379 | The Complex Structure Of The Map Kinase P38SB216995 | 1e-11 | ||
| 2lgc_A | 359 | Joint Nmr And X-Ray Refinement Reveals The Structur | 1e-11 | ||
| 3kq7_A | 380 | Structure Of Human P38alpha With N-[4-Methyl-3-(6-{ | 1e-11 | ||
| 2bal_A | 365 | P38alpha Map Kinase Bound To Pyrazoloamine Length = | 1e-11 | ||
| 3nnu_A | 354 | Crystal Structure Of P38 Alpha In Complex With Dp13 | 1e-11 | ||
| 3hvc_A | 362 | Crystal Structure Of Human P38alpha Map Kinase Leng | 1e-11 | ||
| 4b99_A | 398 | Crystal Structure Of Mapk7 (Erk5) With Inhibitor Le | 1e-11 | ||
| 3nnx_A | 354 | Crystal Structure Of Phosphorylated P38 Alpha In Co | 1e-11 | ||
| 4aw5_A | 291 | Complex Of The Ephb4 Kinase Domain With An Oxindole | 1e-11 | ||
| 3s3i_A | 349 | P38 Kinase Crystal Structure In Complex With Small | 1e-11 | ||
| 3oef_X | 360 | Crystal Structure Of Y323f Inactive Mutant Of P38al | 1e-11 | ||
| 1zzl_A | 351 | Crystal Structure Of P38 With Triazolopyridine Leng | 1e-11 | ||
| 2fso_X | 367 | Mitogen Activated Protein Kinase P38alpha (D176a) A | 1e-11 | ||
| 2x7f_A | 326 | Crystal Structure Of The Kinase Domain Of Human Tra | 2e-11 | ||
| 3hec_A | 348 | P38 In Complex With Imatinib Length = 348 | 2e-11 | ||
| 3k3i_A | 350 | P38alpha Bound To Novel Dgf-Out Compound Pf-0021595 | 2e-11 | ||
| 3eqc_A | 360 | X-Ray Structure Of The Human Mitogen-Activated Prot | 2e-11 | ||
| 4e20_A | 290 | Structure Of Mouse Tyk-2 Complexed To A 3-Aminoinda | 2e-11 | ||
| 4e1z_A | 291 | Structure Of Mouse Tyk-2 Complexed To A 3-Aminoinda | 2e-11 | ||
| 2y4i_C | 395 | Ksr2-Mek1 Heterodimer Length = 395 | 2e-11 | ||
| 1ukh_A | 369 | Structural Basis For The Selective Inhibition Of Jn | 2e-11 | ||
| 4ic7_A | 442 | Crystal Structure Of The Erk5 Kinase Domain In Comp | 2e-11 | ||
| 2xrw_A | 371 | Linear Binding Motifs For Jnk And For Calcineurin A | 2e-11 | ||
| 3oht_A | 389 | Crystal Structure Of Salmo Salar P38alpha Length = | 2e-11 | ||
| 3o17_A | 370 | Crystal Structure Of Jnk1-Alpha1 Isoform Length = 3 | 2e-11 | ||
| 2xs0_A | 386 | Linear Binding Motifs For Jnk And For Calcineurin A | 2e-11 | ||
| 3c4c_A | 280 | B-Raf Kinase In Complex With Plx4720 Length = 280 | 2e-11 | ||
| 3mbl_A | 328 | Crystal Structure Of The Human Mitogen-Activated Pr | 2e-11 | ||
| 3dv3_A | 322 | Mek1 With Pf-04622664 Bound Length = 322 | 2e-11 | ||
| 3gcp_A | 360 | Human P38 Map Kinase In Complex With Sb203580 Lengt | 3e-11 | ||
| 3mh2_A | 360 | Mutagenesis Of P38 Map Kinase Establishes Key Roles | 3e-11 | ||
| 2p55_A | 333 | X-Ray Structure Of The Human Mitogen-Activated Prot | 3e-11 | ||
| 1s9j_A | 341 | X-Ray Structure Of The Human Mitogen-Activated Prot | 3e-11 | ||
| 1ds5_A | 332 | Dimeric Crystal Structure Of The Alpha Subunit In C | 3e-11 | ||
| 1daw_A | 327 | Crystal Structure Of A Binary Complex Of Protein Ki | 3e-11 | ||
| 2qc6_A | 332 | Protein Kinase Ck2 In Complex With Dbc Length = 332 | 4e-11 | ||
| 2fst_X | 367 | Mitogen Activated Protein Kinase P38alpha (d176a+f3 | 4e-11 | ||
| 4anm_A | 335 | Complex Of Ck2 With A Cdc7 Inhibitor Length = 335 | 4e-11 | ||
| 1jpa_A | 312 | Crystal Structure Of Unphosphorylated Ephb2 Recepto | 4e-11 | ||
| 4dgn_A | 326 | Crystal Structure Of Maize Ck2 In Complex With The | 4e-11 | ||
| 3kxg_A | 327 | Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subun | 4e-11 | ||
| 3pvg_A | 331 | Crystal Structure Of Z. Mays Ck2 Alpha Subunit In C | 4e-11 | ||
| 3dtc_A | 271 | Crystal Structure Of Mixed-Lineage Kinase Mlk1 Comp | 4e-11 | ||
| 2fsl_X | 367 | Mitogen Activated Protein Kinase P38alpha (D176a+f3 | 4e-11 | ||
| 3v3v_A | 379 | Structural And Functional Analysis Of Quercetagetin | 4e-11 | ||
| 1m2p_A | 325 | Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro- Anthra | 4e-11 | ||
| 2nry_A | 307 | Crystal Structure Of Irak-4 Length = 307 | 5e-11 | ||
| 2nru_A | 307 | Crystal Structure Of Irak-4 Length = 307 | 5e-11 | ||
| 4dgm_A | 326 | Crystal Structure Of Maize Ck2 In Complex With The | 5e-11 | ||
| 2pvh_A | 352 | Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]tri | 5e-11 | ||
| 3gi3_A | 360 | Crystal Structure Of A N-Phenyl-N'-Naphthylurea Ana | 5e-11 | ||
| 4g3g_A | 350 | Crystal Structure Of Murine Nf-kappab Inducing Kina | 6e-11 | ||
| 4fk3_A | 292 | B-Raf Kinase V600e Oncogenic Mutant In Complex With | 6e-11 | ||
| 2oib_A | 301 | Crystal Structure Of Irak4 Kinase Domain Apo Form L | 6e-11 | ||
| 3o8p_A | 360 | Conformational Plasticity Of P38 Map Kinase Dfg Mot | 7e-11 | ||
| 3pze_A | 358 | Jnk1 In Complex With Inhibitor Length = 358 | 7e-11 | ||
| 3elj_A | 369 | Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine | 8e-11 | ||
| 3aln_A | 327 | Crystal Structure Of Human Non-Phosphorylated Mkk4 | 9e-11 | ||
| 3og7_A | 289 | B-Raf Kinase V600e Oncogenic Mutant In Complex With | 9e-11 | ||
| 2g01_A | 370 | Pyrazoloquinolones As Novel, Selective Jnk1 Inhibit | 1e-10 | ||
| 3mh0_A | 360 | Mutagenesis Of P38 Map Kinase Eshtablishes Key Role | 1e-10 | ||
| 3mh1_A | 360 | Mutagenesis Of P38 Map Kinase Establishes Key Roles | 1e-10 | ||
| 2vwu_A | 302 | Ephb4 Kinase Domain Inhibitor Complex Length = 302 | 1e-10 | ||
| 3mh3_A | 360 | Mutagenesis Of P38 Map Kinase Establishes Key Roles | 2e-10 | ||
| 4g3c_A | 352 | Crystal Structure Of Apo Murine Nf-kappab Inducing | 2e-10 | ||
| 2rei_A | 318 | Kinase Domain Of Human Ephrin Type-a Receptor 7 (ep | 2e-10 | ||
| 3n9x_A | 432 | Crystal Structure Of Map Kinase From Plasmodium Ber | 2e-10 | ||
| 4g3f_A | 336 | Crystal Structure Of Murine Nf-kappab Inducing Kina | 2e-10 | ||
| 3rgf_A | 405 | Crystal Structure Of Human Cdk8CYCC Length = 405 | 2e-10 | ||
| 3nyx_A | 302 | Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-T | 2e-10 | ||
| 3fme_A | 290 | Crystal Structure Of Human Mitogen-Activated Protei | 2e-10 | ||
| 3bz3_A | 276 | Crystal Structure Analysis Of Focal Adhesion Kinase | 3e-10 | ||
| 3qd2_B | 332 | Crsytal Structure Of Mouse Perk Kinase Domain Lengt | 3e-10 | ||
| 2etm_A | 281 | Crystal Structure Of Focal Adhesion Kinase Domain C | 3e-10 | ||
| 4ebw_A | 304 | Structure Of Focal Adhesion Kinase Catalytic Domain | 3e-10 | ||
| 3pxk_A | 282 | Focal Adhesion Kinase Catalytic Domain In Complex W | 3e-10 | ||
| 2hen_A | 286 | Crystal Structure Of The Ephb2 Receptor Kinase Doma | 3e-10 | ||
| 2jkm_A | 276 | Focal Adhesion Kinase Catalytic Domain In Complex W | 3e-10 | ||
| 2j0m_B | 276 | Crystal Structure A Two-Chain Complex Between The F | 4e-10 | ||
| 1mp8_A | 281 | Crystal Structure Of Focal Adhesion Kinase (Fak) Le | 4e-10 | ||
| 3nz0_A | 302 | Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 3 | 4e-10 | ||
| 2j0j_A | 656 | Crystal Structure Of A Fragment Of Focal Adhesion K | 4e-10 | ||
| 3uiu_A | 306 | Crystal Structure Of Apo-Pkr Kinase Domain Length = | 4e-10 | ||
| 4f99_A | 361 | Human Cdc7 Kinase In Complex With Dbf4 And Nucleoti | 5e-10 | ||
| 2r2p_A | 295 | Kinase Domain Of Human Ephrin Type-A Receptor 5 (Ep | 5e-10 | ||
| 2a19_B | 284 | Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex. Leng | 5e-10 | ||
| 2fb8_A | 281 | Structure Of The B-Raf Kinase Domain Bound To Sb-59 | 9e-10 | ||
| 2o8y_A | 298 | Apo Irak4 Kinase Domain Length = 298 | 9e-10 | ||
| 4h58_A | 275 | Braf In Complex With Compound 3 Length = 275 | 1e-09 | ||
| 4dbn_A | 284 | Crystal Structure Of The Kinase Domain Of Human B-R | 1e-09 | ||
| 2qq7_A | 286 | Crystal Structure Of Drug Resistant Src Kinase Doma | 1e-09 | ||
| 2j0k_A | 656 | Crystal Structure Of A Fragment Of Focal Adhesion K | 1e-09 | ||
| 3q96_A | 282 | B-Raf Kinase Domain In Complex With A Tetrahydronap | 1e-09 | ||
| 3d4q_A | 307 | Pyrazole-Based Inhibitors Of B-Raf Kinase Length = | 1e-09 | ||
| 3ii5_A | 306 | The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimi | 1e-09 | ||
| 2dyl_A | 318 | Crystal Structure Of Human Mitogen-Activated Protei | 1e-09 | ||
| 1uwh_A | 276 | The Complex Of Wild Type B-Raf And Bay439006 Length | 1e-09 | ||
| 1y57_A | 452 | Structure Of Unphosphorylated C-Src In Complex With | 1e-09 | ||
| 3vn9_A | 340 | Rifined Crystal Structure Of Non-Phosphorylated Map | 1e-09 | ||
| 3oez_A | 286 | Crystal Structure Of The L317i Mutant Of The Chicke | 1e-09 | ||
| 1fmk_A | 452 | Crystal Structure Of Human Tyrosine-Protein Kinase | 1e-09 | ||
| 3g6h_A | 286 | Src Thr338ile Inhibited In The Dfg-Asp-Out Conforma | 2e-09 | ||
| 2ptk_A | 453 | Chicken Src Tyrosine Kinase Length = 453 | 2e-09 | ||
| 3lxn_A | 318 | Structural And Thermodynamic Characterization Of Th | 2e-09 | ||
| 2jkk_A | 276 | Focal Adhesion Kinase Catalytic Domain In Complex W | 2e-09 | ||
| 2h8h_A | 535 | Src Kinase In Complex With A Quinazoline Inhibitor | 2e-09 | ||
| 1ksw_A | 452 | Structure Of Human C-Src Tyrosine Kinase (Thr338gly | 2e-09 | ||
| 1uwj_A | 276 | The Complex Of Mutant V599e B-raf And Bay439006 Len | 3e-09 | ||
| 1s9i_A | 354 | X-Ray Structure Of The Human Mitogen-Activated Prot | 3e-09 | ||
| 3idp_A | 300 | B-Raf V600e Kinase Domain In Complex With An Aminoi | 3e-09 | ||
| 3d7u_B | 277 | Structural Basis For The Recognition Of C-Src By It | 3e-09 | ||
| 3svv_A | 286 | Crystal Structure Of T338c C-Src Covalently Bound T | 3e-09 | ||
| 4g9r_A | 307 | B-Raf V600e Kinase Domain Bound To A Type Ii Dihydr | 3e-09 | ||
| 2oiq_A | 286 | Crystal Structure Of Chicken C-Src Kinase Domain In | 3e-09 | ||
| 3u4w_A | 275 | Src In Complex With Dna-Templated Macrocyclic Inhib | 3e-09 | ||
| 3bkb_A | 377 | Crystal Structure Of Human Feline Sarcoma Viral Onc | 4e-09 | ||
| 2qok_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f: | 4e-09 | ||
| 2hwo_A | 286 | Crystal Structure Of Src Kinase Domain In Complex W | 6e-09 | ||
| 3geq_A | 286 | Structural Basis For The Chemical Rescue Of Src Kin | 6e-09 | ||
| 2qon_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f: | 6e-09 | ||
| 2bdf_A | 279 | Src Kinase In Complex With Inhibitor Ap23451 Length | 7e-09 | ||
| 3qgw_A | 286 | Crystal Structure Of Itk Kinase Bound To An Inhibit | 7e-09 | ||
| 2j0l_A | 276 | Crystal Structure Of A The Active Conformation Of T | 7e-09 | ||
| 2qoo_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f: | 7e-09 | ||
| 3s95_A | 310 | Crystal Structure Of The Human Limk1 Kinase Domain | 8e-09 | ||
| 2buj_A | 317 | Crystal Structure Of The Human Serine-Threonine Kin | 9e-09 | ||
| 2h34_A | 309 | Apoenzyme Crystal Structure Of The Tuberculosis Ser | 1e-08 | ||
| 2qoi_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f: | 1e-08 | ||
| 3dqw_A | 286 | C-Src Kinase Domain Thr338ile Mutant In Complex Wit | 1e-08 | ||
| 3fxx_A | 371 | Human Epha3 Kinase And Juxtamembrane Region Bound T | 1e-08 | ||
| 2qof_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f | 1e-08 | ||
| 2qod_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y602f | 1e-08 | ||
| 2qob_A | 344 | Human Epha3 Kinase Domain, Base Structure Length = | 1e-08 | ||
| 2qol_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596:y | 1e-08 | ||
| 2qo7_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Dephos | 1e-08 | ||
| 3cd3_A | 377 | Crystal Structure Of Phosphorylated Human Feline Sa | 1e-08 | ||
| 2qoc_A | 344 | Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp | 1e-08 | ||
| 2gsf_A | 373 | The Human Epha3 Receptor Tyrosine Kinase And Juxtam | 1e-08 | ||
| 3dzq_A | 361 | Human Epha3 Kinase Domain In Complex With Inhibitor | 1e-08 | ||
| 2wu6_A | 381 | Crystal Structure Of The Human Clk3 In Complex With | 1e-08 | ||
| 1sm2_A | 264 | Crystal Structure Of The Phosphorylated Interleukin | 1e-08 | ||
| 3v5j_A | 266 | Crystal Structure Of Interleukin-2 Inducible T-Cell | 1e-08 | ||
| 3miy_A | 266 | X-Ray Crystal Structure Of Itk Complexed With Sunit | 1e-08 | ||
| 2exe_A | 357 | Crystal Structure Of The Phosphorylated Clk3 Length | 1e-08 | ||
| 2hel_A | 306 | Crystal Structure Of A Mutant Epha4 Kinase Domain ( | 1e-08 | ||
| 4hct_A | 269 | Crystal Structure Of Itk In Complex With Compound 5 | 1e-08 | ||
| 2eu9_A | 355 | Crystal Structure Of Clk3 Length = 355 | 1e-08 | ||
| 3t9t_A | 267 | Crystal Structure Of Btk Mutant (F435t,K596r) Compl | 1e-08 | ||
| 1yol_A | 283 | Crystal Structure Of Src Kinase Domain In Complex W | 2e-08 | ||
| 1s6i_A | 188 | Ca2+-Regulatory Region (Cld) From Soybean Calcium-D | 2e-08 | ||
| 1s6i_A | 188 | Ca2+-Regulatory Region (Cld) From Soybean Calcium-D | 4e-08 | ||
| 3pm8_A | 197 | Cad Domain Of Pff0520w, Calcium Dependent Protein K | 2e-08 | ||
| 3omv_A | 307 | Crystal Structure Of C-Raf (Raf-1) Length = 307 | 2e-08 | ||
| 2y6m_A | 291 | Crystal Structure Of Epha4 Kinase Domain Length = 2 | 2e-08 | ||
| 2xyu_A | 285 | Crystal Structure Of Epha4 Kinase Domain In Complex | 2e-08 | ||
| 3nr9_A | 368 | Structure Of Human Cdc2-Like Kinase 2 (Clk2) Length | 3e-08 | ||
| 3oy3_A | 284 | Crystal Structure Of Abl T315i Mutant Kinase Domain | 3e-08 | ||
| 2z60_A | 288 | Crystal Structure Of The T315i Mutant Of Abl Kinase | 3e-08 | ||
| 3uib_A | 362 | Map Kinase Lmampk10 From Leishmania Major In Comple | 4e-08 | ||
| 3pg1_A | 362 | Map Kinase Lmampk10 From Leishmania Major (1.95 Ang | 4e-08 | ||
| 1yoj_A | 283 | Crystal Structure Of Src Kinase Domain Length = 283 | 5e-08 | ||
| 3sxr_A | 268 | Crystal Structure Of Bmx Non-Receptor Tyrosine Kina | 6e-08 | ||
| 3nie_A | 429 | Crystal Structure Of Pf11_0147 Length = 429 | 6e-08 | ||
| 3enm_A | 316 | The Structure Of The Map2k Mek6 Reveals An Autoinhi | 7e-08 | ||
| 3qrj_A | 277 | The Crystal Structure Of Human Abl1 Kinase Domain T | 7e-08 | ||
| 4f1o_A | 287 | Crystal Structure Of The L1180t Mutant Roco4 Kinase | 9e-08 | ||
| 1s6j_A | 87 | N-Terminal Region Of The Ca2+-Saturated Calcium Reg | 1e-07 | ||
| 1s6j_A | 87 | N-Terminal Region Of The Ca2+-Saturated Calcium Reg | 6e-04 | ||
| 1yi6_A | 276 | C-Term Tail Segment Of Human Tyrosine Kinase (258-5 | 1e-07 | ||
| 4f0f_A | 287 | Crystal Structure Of The Roco4 Kinase Domain Bound | 2e-07 | ||
| 3dk7_A | 277 | Crystal Structure Of Mutant Abl Kinase Domain In Co | 2e-07 | ||
| 2pzi_A | 681 | Crystal Structure Of Protein Kinase Pkng From Mycob | 3e-07 | ||
| 3kul_B | 325 | Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep | 4e-07 | ||
| 2vx3_A | 382 | Crystal Structure Of The Human Dual Specificity Tyr | 4e-07 | ||
| 3anq_A | 368 | Human Dyrk1aINHIBITOR COMPLEX Length = 368 | 5e-07 | ||
| 4f1m_A | 287 | Crystal Structure Of The G1179s Roco4 Kinase Domain | 5e-07 | ||
| 1pkg_A | 329 | Structure Of A C-kit Kinase Product Complex Length | 6e-07 | ||
| 2i1m_A | 333 | Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An | 6e-07 | ||
| 3g0e_A | 336 | Kit Kinase Domain In Complex With Sunitinib Length | 6e-07 | ||
| 4aze_A | 382 | Human Dyrk1a In Complex With Leucettine L41 Length | 6e-07 | ||
| 1t45_A | 331 | Structural Basis For The Autoinhibition And Sti-571 | 7e-07 | ||
| 3g0f_A | 336 | Kit Kinase Domain Mutant D816h In Complex With Suni | 7e-07 | ||
| 1t46_A | 313 | Structural Basis For The Autoinhibition And Sti-571 | 7e-07 | ||
| 2v7a_A | 286 | Crystal Structure Of The T315i Abl Mutant In Comple | 7e-07 | ||
| 3kul_A | 325 | Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep | 8e-07 | ||
| 3bea_A | 333 | Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A P | 1e-06 | ||
| 2y4i_B | 319 | Ksr2-Mek1 Heterodimer Length = 319 | 2e-06 | ||
| 3sv0_A | 483 | Crystal Structure Of Casein Kinase-1 Like Protein I | 2e-06 | ||
| 3llt_A | 360 | Crystal Structure Of Pf14_0431, Kinase Domain Lengt | 3e-06 | ||
| 3fpq_A | 290 | Crystal Structure Of The Kinase Domain Of Wnk1 Leng | 3e-06 | ||
| 1how_A | 373 | The X-Ray Crystal Structure Of Sky1p, An Sr Protein | 3e-06 | ||
| 2i0v_A | 335 | C-Fms Tyrosine Kinase In Complex With A Quinolone I | 3e-06 | ||
| 3vnt_A | 318 | Crystal Structure Of The Kinase Domain Of Human Veg | 3e-06 | ||
| 3pls_A | 298 | Ron In Complex With Ligand Amp-Pnp Length = 298 | 3e-06 | ||
| 1q8y_A | 373 | The Structure Of The Yeast Sr Protein Kinase, Sky1p | 3e-06 | ||
| 1mqb_A | 333 | Crystal Structure Of Ephrin A2 (Epha2) Receptor Pro | 3e-06 | ||
| 3kxx_A | 317 | Structure Of The Mutant Fibroblast Growth Factor Re | 3e-06 | ||
| 3rhx_B | 306 | Crystal Structure Of The Catalytic Domain Of Fgfr1 | 3e-06 | ||
| 2oh4_A | 316 | Crystal Structure Of Vegfr2 With A Benzimidazole-Ur | 4e-06 | ||
| 1fgk_A | 310 | Crystal Structure Of The Tyrosine Kinase Domain Of | 4e-06 | ||
| 3js2_A | 317 | Crystal Structure Of Minimal Kinase Domain Of Fibro | 4e-06 | ||
| 3tt0_A | 382 | Co-Structure Of Fibroblast Growth Factor Receptor 1 | 4e-06 | ||
| 1vr2_A | 316 | Human Vascular Endothelial Growth Factor Receptor 2 | 4e-06 | ||
| 4f63_A | 309 | Crystal Structure Of Human Fibroblast Growth Factor | 4e-06 | ||
| 2xir_A | 316 | Crystal Structure Of The Vegfr2 Kinase Domain In Co | 4e-06 | ||
| 4agc_A | 353 | Crystal Structure Of Vegfr2 (Juxtamembrane And Kina | 5e-06 | ||
| 3c4f_A | 302 | Fgfr Tyrosine Kinase Domain In Complex With 3-(3- M | 5e-06 | ||
| 3gql_A | 326 | Crystal Structure Of Activated Receptor Tyrosine Ki | 5e-06 | ||
| 3c7q_A | 316 | Structure Of Vegfr2 Kinase Domain In Complex With B | 5e-06 | ||
| 3ewh_A | 314 | Crystal Structure Of The Vegfr2 Kinase Domain In Co | 6e-06 | ||
| 4hvd_A | 314 | Jak3 Kinase Domain In Complex With 2-cyclopropyl-5h | 6e-06 | ||
| 3u6j_A | 314 | Crystal Structure Of The Vegfr2 Kinase Domain In Co | 6e-06 | ||
| 3pjc_A | 315 | Crystal Structure Of Jak3 Complexed With A Potent A | 6e-06 | ||
| 3cjg_A | 309 | Crystal Structure Of Vegfr2 In Complex With A 3,4,5 | 7e-06 | ||
| 3cjf_A | 309 | Crystal Structure Of Vegfr2 In Complex With A 3,4,5 | 7e-06 | ||
| 3lxk_A | 327 | Structural And Thermodynamic Characterization Of Th | 8e-06 | ||
| 1k2p_A | 263 | Crystal Structure Of Bruton's Tyrosine Kinase Domai | 9e-06 | ||
| 3p08_A | 267 | Crystal Structure Of The Human Btk Kinase Domain Le | 9e-06 | ||
| 1ywn_A | 316 | Vegfr2 In Complex With A Novel 4-amino-furo[2,3-d]p | 1e-05 | ||
| 2xa4_A | 298 | Inhibitors Of Jak2 Kinase Domain Length = 298 | 1e-05 | ||
| 3lcd_A | 329 | Inhibitor Bound To A Dfg-In Structure Of The Kinase | 1e-05 | ||
| 2ogv_A | 317 | Crystal Structure Of The Autoinhibited Human C-Fms | 1e-05 | ||
| 3ocs_A | 271 | Crystal Structure Of Bruton's Tyrosine Kinase In Co | 1e-05 | ||
| 4e6d_A | 298 | Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex W | 1e-05 | ||
| 1eh4_A | 298 | Binary Complex Of Casein Kinase-1 From S. Pombe Wit | 1e-05 | ||
| 2csn_A | 297 | Binary Complex Of Casein Kinase-1 With Cki7 Length | 1e-05 | ||
| 2p2i_A | 314 | Crystal Structure Of The Vegfr2 Kinase Domain In Co | 1e-05 | ||
| 3ugc_A | 295 | Structural Basis Of Jak2 Inhibition By The Type Ii | 1e-05 | ||
| 4bbe_A | 298 | Aminoalkylpyrimidine Inhibitor Complexes With Jak2 | 1e-05 | ||
| 3rp9_A | 458 | Crystal Structure Of The Apo Mapk From Toxoplasma G | 1e-05 | ||
| 2w1i_A | 326 | Structure Determination Of Aurora Kinase In Complex | 1e-05 | ||
| 3pix_A | 274 | Crystal Structure Of Btk Kinase Domain Complexed Wi | 1e-05 | ||
| 3gen_A | 283 | The 1.6 A Crystal Structure Of Human Bruton's Tyros | 1e-05 | ||
| 2p2h_A | 314 | Crystal Structure Of The Vegfr2 Kinase Domain In Co | 2e-05 | ||
| 3lco_A | 324 | Inhibitor Bound To A Dfg-Out Structure Of The Kinas | 2e-05 | ||
| 4e4m_A | 302 | Jak2 Kinase (Jh1 Domain) In Complex With Compound 3 | 2e-05 | ||
| 1rjb_A | 344 | Crystal Structure Of Flt3 Length = 344 | 2e-05 | ||
| 3v5q_A | 297 | Discovery Of A Selective Trk Inhibitor With Efficac | 2e-05 | ||
| 3gni_B | 389 | Structure Of Strad And Mo25 Length = 389 | 2e-05 | ||
| 3q32_A | 301 | Structure Of Janus Kinase 2 With A Pyrrolotriazine | 2e-05 | ||
| 4hge_A | 300 | Jak2 Kinase (Jh1 Domain) In Complex With Compound 8 | 2e-05 | ||
| 3tjc_A | 298 | Co-Crystal Structure Of Jak2 With Thienopyridine 8 | 2e-05 | ||
| 3e62_A | 293 | Fragment Based Discovery Of Jak-2 Inhibitors Length | 2e-05 | ||
| 2wtk_B | 373 | Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo2 | 2e-05 | ||
| 2b7a_A | 293 | The Structural Basis Of Janus Kinase 2 Inhibition B | 2e-05 | ||
| 4aqc_A | 301 | Triazolopyridine-Based Inhibitor Of Janus Kinase 2 | 2e-05 | ||
| 3lpb_A | 295 | Crystal Structure Of Jak2 Complexed With A Potent 2 | 2e-05 | ||
| 3rvg_A | 303 | Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido | 2e-05 | ||
| 3jy9_A | 311 | Janus Kinase 2 Inhibitors Length = 311 | 3e-05 | ||
| 3io7_A | 313 | 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Sel | 3e-05 | ||
| 1yvj_A | 290 | Crystal Structure Of The Jak3 Kinase Domain In Comp | 4e-05 | ||
| 4gt4_A | 308 | Structure Of Unliganded, Inactive Ror2 Kinase Domai | 4e-05 | ||
| 2pvy_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 4e-05 | ||
| 3d7u_A | 263 | Structural Basis For The Recognition Of C-Src By It | 5e-05 | ||
| 2dq7_X | 283 | Crystal Structure Of Fyn Kinase Domain Complexed Wi | 5e-05 | ||
| 1byg_A | 278 | Kinase Domain Of Human C-Terminal Src Kinase (Csk) | 5e-05 | ||
| 3zzw_A | 289 | Crystal Structure Of The Kinase Domain Of Ror2 Leng | 6e-05 | ||
| 3o77_A | 415 | The Structure Of Ca2+ Sensor (Case-16) Length = 415 | 6e-05 | ||
| 3sg2_A | 449 | Crystal Structure Of Gcamp2-T116v,D381y Length = 44 | 6e-05 | ||
| 3ek8_A | 449 | Calcium-Saturated Gcamp2 T116vG87R MUTANT MONOMER L | 6e-05 | ||
| 3sg6_A | 450 | Crystal Structure Of Dimeric Gcamp2-Lia(Linker 1) L | 6e-05 | ||
| 2pwl_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 6e-05 | ||
| 3o78_A | 415 | The Structure Of Ca2+ Sensor (Case-12) Length = 415 | 6e-05 | ||
| 3evu_A | 449 | Crystal Structure Of Calcium Bound Dimeric Gcamp2, | 6e-05 | ||
| 3evr_A | 411 | Crystal Structure Of Calcium Bound Monomeric Gcamp2 | 6e-05 | ||
| 1k9a_A | 450 | Crystal Structure Analysis Of Full-Length Carboxyl- | 7e-05 | ||
| 1fvr_A | 327 | Tie2 Kinase Domain Length = 327 | 7e-05 | ||
| 3gqi_A | 326 | Crystal Structure Of Activated Receptor Tyrosine Ki | 7e-05 | ||
| 3oct_A | 265 | Crystal Structure Of Bruton's Tyrosine Kinase Mutan | 7e-05 | ||
| 2oo8_X | 317 | Synthesis, Structural Analysis, And Sar Studies Of | 8e-05 | ||
| 3sg3_A | 449 | Crystal Structure Of Gcamp3-D380y Length = 449 | 8e-05 | ||
| 2pz5_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 8e-05 | ||
| 2pzp_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 8e-05 | ||
| 3sg5_A | 448 | Crystal Structure Of Dimeric Gcamp3-D380y, Qp(Linke | 8e-05 | ||
| 3sg4_A | 448 | Crystal Structure Of Gcamp3-D380y, Lp(Linker 2) Len | 8e-05 | ||
| 3k54_A | 283 | Structures Of Human Bruton's Tyrosine Kinase In Act | 8e-05 | ||
| 3pp0_A | 338 | Crystal Structure Of The Kinase Domain Of Human Her | 9e-05 | ||
| 3sg7_A | 448 | Crystal Structure Of Gcamp3-Kf(Linker 1) Length = 4 | 9e-05 | ||
| 3a4o_X | 286 | Lyn Kinase Domain Length = 286 | 9e-05 | ||
| 1xfu_O | 149 | Crystal Structure Of Anthrax Edema Factor (ef) Trun | 1e-04 | ||
| 4asz_A | 299 | Crystal Structure Of Apo Trkb Kinase Domain Length | 1e-04 | ||
| 3ekh_A | 449 | Calcium-Saturated Gcamp2 T116vK378W MUTANT MONOMER | 1e-04 | ||
| 1gjo_A | 316 | The Fgfr2 Tyrosine Kinase Domain Length = 316 | 1e-04 | ||
| 3u0k_A | 440 | Crystal Structure Of The Genetically Encoded Calciu | 1e-04 | ||
| 3dkg_A | 317 | Sgx Clone 5698a109kfg1h1 Length = 317 | 1e-04 | ||
| 3ri1_A | 313 | Crystal Structure Of The Catalytic Domain Of Fgfr2 | 1e-04 | ||
| 3b2t_A | 311 | Structure Of Phosphotransferase Length = 311 | 1e-04 | ||
| 1ckj_A | 317 | Casein Kinase I Delta Truncation Mutant Containing | 1e-04 | ||
| 3uys_A | 296 | Crystal Structure Of Apo Human Ck1d Length = 296 | 1e-04 | ||
| 2f2o_A | 179 | Structure Of Calmodulin Bound To A Calcineurin Pept | 1e-04 | ||
| 2psq_A | 370 | Crystal Structure Of Unphosphorylated Unactivated W | 1e-04 | ||
| 2pzr_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 2e-04 | ||
| 1vrk_A | 148 | The 1.9 Angstrom Structure Of E84k-Calmodulin Rs20 | 2e-04 | ||
| 1exr_A | 148 | The 1.0 Angstrom Crystal Structure Of Ca+2 Bound Ca | 2e-04 | ||
| 2wqb_A | 324 | Structure Of The Tie2 Kinase Domain In Complex With | 3e-04 | ||
| 4hni_A | 296 | Crystal Structure Of Ck1e In Complex With Pf4800567 | 3e-04 | ||
| 3d7t_A | 269 | Structural Basis For The Recognition Of C-Src By It | 3e-04 | ||
| 4djc_A | 152 | 1.35 A Crystal Structure Of The Nav1.5 Diii-Iv-CaCA | 3e-04 | ||
| 2be6_A | 150 | 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaC | 3e-04 | ||
| 1iq5_A | 149 | CalmodulinNEMATODE CA2+CALMODULIN DEPENDENT KINASE | 3e-04 | ||
| 2ygg_B | 150 | Complex Of Cambr And Cam Length = 150 | 3e-04 | ||
| 2g15_A | 318 | Structural Characterization Of Autoinhibited C-Met | 3e-04 | ||
| 2wel_D | 150 | Crystal Structure Of Su6656-Bound CalciumCALMODULIN | 3e-04 | ||
| 3q6u_A | 308 | Structure Of The Apo Met Receptor Kinase In The Dua | 3e-04 | ||
| 3q6w_A | 307 | Structure Of Dually-phosphorylated Met Receptor Kin | 3e-04 | ||
| 2q0b_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 4e-04 | ||
| 2rfn_A | 310 | X-ray Structure Of C-met With Inhibitor. Length = 3 | 4e-04 | ||
| 2wgj_A | 306 | X-Ray Structure Of Pf-02341066 Bound To The Kinase | 4e-04 | ||
| 3f66_A | 298 | Human C-Met Kinase In Complex With Quinoxaline Inhi | 4e-04 | ||
| 4gg5_A | 319 | Crystal Structure Of Cmet In Complex With Novel Inh | 4e-04 | ||
| 3i5n_A | 309 | Crystal Structure Of C-Met With Triazolopyridazine | 4e-04 | ||
| 3lq8_A | 302 | Structure Of The Kinase Domain Of C-Met Bound To Xl | 4e-04 | ||
| 2wd1_A | 292 | Human C-Met Kinase In Complex With Azaindole Inhibi | 4e-04 | ||
| 3ewt_A | 154 | Crystal Structure Of Calmodulin Complexed With A Pe | 4e-04 | ||
| 1cm1_A | 148 | Motions Of Calmodulin-Single-Conformer Refinement L | 4e-04 | ||
| 2bkh_B | 149 | Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Struc | 4e-04 | ||
| 1cdl_A | 147 | Target Enzyme Recognition By Calmodulin: 2.4 Angstr | 5e-04 | ||
| 2vay_A | 146 | Calmodulin Complexed With Cav1.1 Iq Peptide Length | 5e-04 | ||
| 1cdm_A | 144 | Modulation Of Calmodulin Plasticity In Molecular Re | 5e-04 | ||
| 2py3_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 5e-04 | ||
| 4gow_D | 144 | Crystal Structure Of Ca2+CAM:KV7.4 (KCNQ4) B HELIX | 5e-04 | ||
| 1prw_A | 149 | Crystal Structure Of Bovine Brain Ca++ Calmodulin I | 5e-04 | ||
| 1up5_B | 148 | Chicken Calmodulin Length = 148 | 5e-04 | ||
| 3dkc_A | 317 | Sgx Clone 5698a65kfg1h1 Length = 317 | 5e-04 | ||
| 1ooj_A | 149 | Structural Genomics Of Caenorhabditis Elegans : Cal | 5e-04 | ||
| 2pvf_A | 334 | Crystal Structure Of Tyrosine Phosphorylated Activa | 5e-04 | ||
| 3cly_A | 334 | Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase | 5e-04 | ||
| 3qrx_A | 169 | Chlamydomonas Reinhardtii Centrin Bound To Melittin | 5e-04 | ||
| 2lv6_A | 148 | The Complex Between Ca-calmodulin And Skeletal Musc | 5e-04 | ||
| 2ix7_A | 145 | Structure Of Apo-Calmodulin Bound To Unconventional | 5e-04 | ||
| 2vb6_B | 149 | Myosin Vi (Md-Insert2-Cam, Delta Insert1) Post-Rigo | 6e-04 | ||
| 1qs7_A | 145 | The 1.8 Angstrom Structure Of Calmodulin Rs20 Pepti | 6e-04 | ||
| 1r0p_A | 312 | Crystal Structure Of The Tyrosine Kinase Domain Of | 6e-04 | ||
| 1qtx_A | 148 | The 1.65 Angstrom Structure Of Calmodulin Rs20 Pept | 6e-04 | ||
| 2lhi_A | 176 | Solution Structure Of Ca2+CNA1 PEPTIDE-Bound Ycam L | 6e-04 | ||
| 1clm_A | 148 | Structure Of Paramecium Tetraurelia Calmodulin At 1 | 6e-04 | ||
| 3cth_A | 314 | Crystal Structure Of The Tyrosine Kinase Domain Of | 6e-04 | ||
| 2bbm_A | 148 | Solution Structure Of A Calmodulin-Target Peptide C | 6e-04 | ||
| 1ahr_A | 146 | Calmodulin Mutant With A Two Residue Deletion In Th | 6e-04 | ||
| 4ds7_A | 147 | Crystal Structure Of Yeast Calmodulin Bound To The | 6e-04 | ||
| 2k0j_A | 148 | Solution Structure Of Cam Complexed To Drp1p Length | 6e-04 | ||
| 3a4p_A | 319 | Human C-Met Kinase Domain Complexed With 6-Benzylox | 6e-04 | ||
| 3qti_A | 314 | C-Met Kinase In Complex With Nvp-Bvu972 Length = 31 | 7e-04 | ||
| 3hgk_A | 327 | Crystal Structure Of Effect Protein Avrptob Complex | 7e-04 | ||
| 3e7e_A | 365 | Structure And Substrate Recruitment Of The Human Sp | 7e-04 | ||
| 3c1x_A | 373 | Crystal Structure Of The Tyrosine Kinase Domain Of | 7e-04 | ||
| 1deg_A | 142 | The Linker Of Des-Glu84 Calmodulin Is Bent As Seen | 8e-04 |
| >pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1, Cgd3_920 Length = 486 | Back alignment and structure |
|
| >pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In Complex With Ca2+ And Amppnp Length = 494 | Back alignment and structure |
|
| >pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme49_105860 Length = 467 | Back alignment and structure |
|
| >pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From Toxoplasma Gondii, Tgme49.101440 Length = 507 | Back alignment and structure |
|
| >pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tgme49_101440, In Presence Of Calcium Length = 508 | Back alignment and structure |
|
| >pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium Dependent Protein Kinase Cgd7_1840 In Presence Of Indirubin E804 Length = 277 | Back alignment and structure |
|
| >pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase Cgd7_1840 Length = 294 | Back alignment and structure |
|
| >pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) Length = 484 | Back alignment and structure |
|
| >pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino( Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6- Difluoro-Phenyl)-Amide) Length = 349 | Back alignment and structure |
|
| >pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2 Length = 484 | Back alignment and structure |
|
| >pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium Parvum Calcium Dependent Protein Kinase In Complex With 3- Mb-Pp1 Length = 287 | Back alignment and structure |
|
| >pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent Protein Kinase Cgd3_920 From Cryptosporidium Parvum Length = 286 | Back alignment and structure |
|
| >pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein Kinase 1d Length = 334 | Back alignment and structure |
|
| >pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat Length = 332 | Back alignment and structure |
|
| >pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-320 In Complex With Atp Length = 320 | Back alignment and structure |
|
| >pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-293 In Complex With Atp Length = 293 | Back alignment and structure |
|
| >pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin E804 Length = 313 | Back alignment and structure |
|
| >pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-315 In Complex With Atp Length = 315 | Back alignment and structure |
|
| >pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN- Dependent Protein Kinase Ii Delta In Complex With Calmodulin Length = 327 | Back alignment and structure |
|
| >pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent Protein Kinase Ii Delta Isoform 1, Camkd Length = 301 | Back alignment and structure |
|
| >pdb|3SOA|A Chain A, Full-Length Human Camkii Length = 444 | Back alignment and structure |
|
| >pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase Iib Isoform 1 (camk2b) Length = 295 | Back alignment and structure |
|
| >pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent Protein Kinase Ii Gamma Length = 336 | Back alignment and structure |
|
| >pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence Of 3brb-Pp1 Length = 298 | Back alignment and structure |
|
| >pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From Toxoplasma Gondii, 541.m00134, Kinase Domain Length = 287 | Back alignment and structure |
|
| >pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein Kinase I G Length = 304 | Back alignment and structure |
|
| >pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of CalciumCALMODULIN ACTIVATED KINASE II Length = 362 | Back alignment and structure |
|
| >pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex Length = 269 | Back alignment and structure |
|
| >pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420 Length = 504 | Back alignment and structure |
|
| >pdb|3KK8|A Chain A, Camkii Substrate Complex A Length = 284 | Back alignment and structure |
|
| >pdb|3KK9|A Chain A, Camkii Substrate Complex B Length = 282 | Back alignment and structure |
|
| >pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At Thr265 Length = 278 | Back alignment and structure |
|
| >pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase 3 (Dapk3) In Complex With A Beta-Carboline Ligand Length = 283 | Back alignment and structure |
|
| >pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A Tetracyclic Pyridone Inhibitor (pyridone 6) Length = 304 | Back alignment and structure |
|
| >pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native Length = 351 | Back alignment and structure |
|
| >pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302 Length = 302 | Back alignment and structure |
|
| >pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant Length = 334 | Back alignment and structure |
|
| >pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304 Length = 326 | Back alignment and structure |
|
| >pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In Complex With A Ruthenium Octasporine Ligand (Osv) Length = 285 | Back alignment and structure |
|
| >pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex Length = 334 | Back alignment and structure |
|
| >pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In Complex With Small Molecular Inhibitors Length = 278 | Back alignment and structure |
|
| >pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312 Length = 312 | Back alignment and structure |
|
| >pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277 Length = 277 | Back alignment and structure |
|
| >pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic Domain Of Death-Associated Protein Kinase With Atp Analogue And Mn. Length = 294 | Back alignment and structure |
|
| >pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With Bound Inhibitor Fragment Length = 293 | Back alignment and structure |
|
| >pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase In Complex With Amppnp And Mg2+ Length = 295 | Back alignment and structure |
|
| >pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The Death Associated Protein Kinase Catalytic Domain With Amppnp Length = 295 | Back alignment and structure |
|
| >pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine Length = 295 | Back alignment and structure |
|
| >pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2 Length = 365 | Back alignment and structure |
|
| >pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp Length = 295 | Back alignment and structure |
|
| >pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form Length = 351 | Back alignment and structure |
|
| >pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX Length = 361 | Back alignment and structure |
|
| >pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2 Length = 361 | Back alignment and structure |
|
| >pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide Substrate Complex: Kinase Substrate Recognition Length = 277 | Back alignment and structure |
|
| >pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase, Kinase: An Active Protein Kinase Complexed With Nucleotide, Substrate-Analogue And Product Length = 298 | Back alignment and structure |
|
| >pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By Mutational Studies Length = 298 | Back alignment and structure |
|
| >pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form With 3 Monomers In The Asymmetric Unit Length = 321 | Back alignment and structure |
|
| >pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form With 8 Monomers In The Asymmetric Unit Length = 321 | Back alignment and structure |
|
| >pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1 Kinase Length = 288 | Back alignment and structure |
|
| >pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The Autoinhibited Conformation Of A Human Death-associated Protein Kinase Length = 321 | Back alignment and structure |
|
| >pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40 Length = 321 | Back alignment and structure |
|
| >pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase Length = 330 | Back alignment and structure |
|
| >pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1 In With Amp-Pnp Length = 325 | Back alignment and structure |
|
| >pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain Length = 346 | Back alignment and structure |
|
| >pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma Gondii, Tgme49_018720 Length = 285 | Back alignment and structure |
|
| >pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 (rsk2) Length = 342 | Back alignment and structure |
|
| >pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With Inhibitor Pv976 Length = 323 | Back alignment and structure |
|
| >pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With Inhibitor Pv1531 Length = 322 | Back alignment and structure |
|
| >pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A Specific Inhibitor Length = 323 | Back alignment and structure |
|
| >pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In Complex With Inhibitor Pv1533 Length = 322 | Back alignment and structure |
|
| >pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp Length = 329 | Back alignment and structure |
|
| >pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated Protein Kinase-Activated Protein Kinase 3 (Mk3)-Inhibitor Complex Length = 336 | Back alignment and structure |
|
| >pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b Length = 317 | Back alignment and structure |
|
| >pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2: Se-Met Derivative Length = 342 | Back alignment and structure |
|
| >pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage Checkpoint Kinase Length = 443 | Back alignment and structure |
|
| >pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage Checkpoint Kinase Length = 419 | Back alignment and structure |
|
| >pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle Protein Titin Length = 321 | Back alignment and structure |
|
| >pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor 6-(5-(2-Aminopyrimidin-4-Ylamino)-2- Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide Length = 320 | Back alignment and structure |
|
| >pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer Length = 406 | Back alignment and structure |
|
| >pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2 Length = 400 | Back alignment and structure |
|
| >pdb|2OZA|A Chain A, Structure Of P38alpha Complex Length = 356 | Back alignment and structure |
|
| >pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap Kinase-2 Length = 325 | Back alignment and structure |
|
| >pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76 Length = 324 | Back alignment and structure |
|
| >pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To Mapkap Kinase-2 Length = 327 | Back alignment and structure |
|
| >pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1 Length = 319 | Back alignment and structure |
|
| >pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal Form-1, Soaking) Length = 326 | Back alignment and structure |
|
| >pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b Length = 318 | Back alignment and structure |
|
| >pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands Length = 334 | Back alignment and structure |
|
| >pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase 2 Length = 400 | Back alignment and structure |
|
| >pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain Length = 307 | Back alignment and structure |
|
| >pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein Kinase Domain Length = 387 | Back alignment and structure |
|
| >pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor Discovered Through Site-Directed Dynamic Tethering Length = 272 | Back alignment and structure |
|
| >pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain Kinase Loc340156. Length = 373 | Back alignment and structure |
|
| >pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated Protein Kinase And Immunoglobulin Domains Length = 491 | Back alignment and structure |
|
| >pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans (Fn31-Nl-Kin-Crd-Ig26) Length = 573 | Back alignment and structure |
|
| >pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240->arg, Met302- >leu) In Complex With 1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]- Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea Length = 272 | Back alignment and structure |
|
| >pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With A Potent 3-Aminopyrazole Atp Site Inhibitor Length = 299 | Back alignment and structure |
|
| >pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A 5-Aminopyrimidinyl Quinazoline Inhibitor Length = 283 | Back alignment and structure |
|
| >pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With Adpnp Length = 275 | Back alignment and structure |
|
| >pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632 Length = 306 | Back alignment and structure |
|
| >pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A Gsk3beta Inhibitor Length = 287 | Back alignment and structure |
|
| >pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A Inhibitors: Structure Basis For Potency And Specificity Length = 279 | Back alignment and structure |
|
| >pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form) Length = 285 | Back alignment and structure |
|
| >pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure Length = 285 | Back alignment and structure |
|
| >pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of Pyrazolopyridine- Sulfonamides As Potent Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I) Length = 271 | Back alignment and structure |
|
| >pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk Length = 476 | Back alignment and structure |
|
| >pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679 Length = 279 | Back alignment and structure |
|
| >pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300 Length = 280 | Back alignment and structure |
|
| >pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine- Threonine Kinase Length = 297 | Back alignment and structure |
|
| >pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626 Length = 306 | Back alignment and structure |
|
| >pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A Pentacyclic Inhibitor Length = 268 | Back alignment and structure |
|
| >pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human 5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant (T172d) Length = 276 | Back alignment and structure |
|
| >pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine Inhibitor Length = 283 | Back alignment and structure |
|
| >pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287, Thr288 And Bound To Tpx2 1-43 Length = 282 | Back alignment and structure |
|
| >pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275 | Back alignment and structure |
|
| >pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor Length = 285 | Back alignment and structure |
|
| >pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275 | Back alignment and structure |
|
| >pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A Diaminopyrimidine Length = 281 | Back alignment and structure |
|
| >pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358 Length = 280 | Back alignment and structure |
|
| >pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp Length = 285 | Back alignment and structure |
|
| >pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa Length = 267 | Back alignment and structure |
|
| >pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And Compound 10 Length = 268 | Back alignment and structure |
|
| >pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase Length = 272 | Back alignment and structure |
|
| >pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And Tpx2 Length = 268 | Back alignment and structure |
|
| >pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors Length = 283 | Back alignment and structure |
|
| >pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine Length = 268 | Back alignment and structure |
|
| >pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a Length = 282 | Back alignment and structure |
|
| >pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant Length = 262 | Back alignment and structure |
|
| >pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine Inhibitor Length = 272 | Back alignment and structure |
|
| >pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439 Length = 285 | Back alignment and structure |
|
| >pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2 Chain) Length = 276 | Back alignment and structure |
|
| >pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g Length = 316 | Back alignment and structure |
|
| >pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B (STK17B) Length = 327 | Back alignment and structure |
|
| >pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin. Length = 284 | Back alignment and structure |
|
| >pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1 Length = 328 | Back alignment and structure |
|
| >pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From Cryptosporidium Parvum, Cgd7_40 Length = 345 | Back alignment and structure |
|
| >pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain Length = 316 | Back alignment and structure |
|
| >pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES BY Mimicking Host Substrates Length = 319 | Back alignment and structure |
|
| >pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1 Length = 361 | Back alignment and structure |
|
| >pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6 Length = 362 | Back alignment and structure |
|
| >pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like Kinase 1 (Plk1) Catalytic Domain In Complex With Compound 902 Length = 301 | Back alignment and structure |
|
| >pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like Kinase 1 (Plk1) Catalytic Domain. Length = 317 | Back alignment and structure |
|
| >pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a Double Mutant Length = 328 | Back alignment and structure |
|
| >pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex With Gold Length = 362 | Back alignment and structure |
|
| >pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: Wild Type Length = 327 | Back alignment and structure |
|
| >pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680 Length = 292 | Back alignment and structure |
|
| >pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r, T208e Double Mutant Length = 327 | Back alignment and structure |
|
| >pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant Length = 327 | Back alignment and structure |
|
| >pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment Length = 336 | Back alignment and structure |
|
| >pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: K82r Mutant Length = 327 | Back alignment and structure |
|
| >pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase Catalytic Subunit From Saccharomyces Cerevisiae Length = 318 | Back alignment and structure |
|
| >pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: T208aS212A INACTIVE DOUBLE MUTANT Length = 327 | Back alignment and structure |
|
| >pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase Length = 362 | Back alignment and structure |
|
| >pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1) Catalytic Domain Length = 317 | Back alignment and structure |
|
| >pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1 (Plk1) Catalytic Domain In Complex With Adp Length = 317 | Back alignment and structure |
|
| >pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase Length = 278 | Back alignment and structure |
|
| >pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6 Length = 317 | Back alignment and structure |
|
| >pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3 Length = 361 | Back alignment and structure |
|
| >pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: Inactive Double Mutant With Selenomethionine Length = 327 | Back alignment and structure |
|
| >pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain Length = 283 | Back alignment and structure |
|
| >pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast Amp-Activated Protein Kinase Snf1 Length = 275 | Back alignment and structure |
|
| >pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of The Saccharomyces Cerevisiae Ampk Homolog Snf1 Length = 271 | Back alignment and structure |
|
| >pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast Snf1 Length = 274 | Back alignment and structure |
|
| >pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1 Length = 328 | Back alignment and structure |
|
| >pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain Length = 402 | Back alignment and structure |
|
| >pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex With Indazole Derivative (Compound 18) Length = 410 | Back alignment and structure |
|
| >pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe Complex Structure Length = 406 | Back alignment and structure |
|
| >pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil Length = 415 | Back alignment and structure |
|
| >pdb|4FSY|A Chain A, Crystal Structure Of The Chk1 Length = 279 | Back alignment and structure |
|
| >pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A Pyrrolo-Pyridine Inhibitor Length = 273 | Back alignment and structure |
|
| >pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By Structure Based Design And Optimization Of Thiophene Carboxamide Ureas Length = 276 | Back alignment and structure |
|
| >pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 Length = 292 | Back alignment and structure |
|
| >pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1 Length = 279 | Back alignment and structure |
|
| >pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding Site Length = 271 | Back alignment and structure |
|
| >pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human Chk1 Kinase Domain Length = 273 | Back alignment and structure |
|
| >pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017 Length = 268 | Back alignment and structure |
|
| >pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Pf-03758309 Length = 296 | Back alignment and structure |
|
| >pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor Length = 269 | Back alignment and structure |
|
| >pdb|4FSN|A Chain A, Crystal Structure Of The Chk1 Length = 278 | Back alignment and structure |
|
| >pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994 Length = 269 | Back alignment and structure |
|
| >pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint Kinase Inhibitors - Hit To Lead Exploration Length = 276 | Back alignment and structure |
|
| >pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In Complex With A Consensus Peptide Length = 301 | Back alignment and structure |
|
| >pdb|4FSM|A Chain A, Crystal Structure Of The Chk1 Length = 279 | Back alignment and structure |
|
| >pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Cgp74514a Length = 303 | Back alignment and structure |
|
| >pdb|4FST|A Chain A, Crystal Structure Of The Chk1 Length = 269 | Back alignment and structure |
|
| >pdb|4FSW|A Chain A, Crystal Structure Of The Chk1 Length = 279 | Back alignment and structure |
|
| >pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54 Length = 323 | Back alignment and structure |
|
| >pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights Into Hydrogen Bonding And Protein-Ligand Affinity Length = 297 | Back alignment and structure |
|
| >pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint Kinase Chk1 Length = 289 | Back alignment and structure |
|
| >pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine Analog Length = 295 | Back alignment and structure |
|
| >pdb|4FT3|A Chain A, Crystal Structure Of The Chk1 Length = 279 | Back alignment and structure |
|
| >pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors In Complex With Protein Kinase A And Mutants Length = 350 | Back alignment and structure |
|
| >pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a, L173m, Q181k) With Compound 18 Length = 351 | Back alignment and structure |
|
| >pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20 Length = 322 | Back alignment and structure |
|
| >pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide Length = 346 | Back alignment and structure |
|
| >pdb|4FIE|A Chain A, Full-Length Human Pak4 Length = 423 | Back alignment and structure |
|
| >pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb Length = 350 | Back alignment and structure |
|
| >pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1 Reveals A Novel Autoinhibitory Conformation For A Dual Kinase Protein Length = 355 | Back alignment and structure |
|
| >pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered N- Terminal Helix Length = 350 | Back alignment and structure |
|
| >pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol Length = 351 | Back alignment and structure |
|
| >pdb|4FSU|A Chain A, Crystal Structure Of The Chk1 Length = 279 | Back alignment and structure |
|
| >pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor Arc-670 Length = 351 | Back alignment and structure |
|
| >pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor Arc-1039 Length = 351 | Back alignment and structure |
|
| >pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform Of Protein Kinase A (pka) Catalytic Subunit Calpha 2 Length = 343 | Back alignment and structure |
|
| >pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp Length = 350 | Back alignment and structure |
|
| >pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor Complex Length = 371 | Back alignment and structure |
|
| >pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4- Chlorophenyl)-1-(7h-Pyrrolo(2, 3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine Length = 351 | Back alignment and structure |
|
| >pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With Inhibitor Jnj- 7706621 Length = 351 | Back alignment and structure |
|
| >pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And Potent Inhibitors For Akt: Synthesis And Sar Studies Length = 337 | Back alignment and structure |
|
| >pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309 | Back alignment and structure |
|
| >pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl) Amide Length = 351 | Back alignment and structure |
|
| >pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl)amide Length = 351 | Back alignment and structure |
|
| >pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5 Length = 317 | Back alignment and structure |
|
| >pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7 Length = 311 | Back alignment and structure |
|
| >pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In Complex With Staurosporine Length = 350 | Back alignment and structure |
|
| >pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With Azepane Derivative 8 Length = 350 | Back alignment and structure |
|
| >pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors Length = 336 | Back alignment and structure |
|
| >pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With Pki-5-24 Length = 350 | Back alignment and structure |
|
| >pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In Complex With H89 Protein Kinase Inhibitor N-[2- (4-Bromocinnamylamino)ethyl]-5-Isoquinoline Length = 350 | Back alignment and structure |
|
| >pdb|2F7E|E Chain E, Pka Complexed With (S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6- Yl-Pyridin-3-Yloxymethyl-Etylamine Length = 351 | Back alignment and structure |
|
| >pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent Protein Kinase Reveals Unexpected Apoenzyme Conformation Length = 350 | Back alignment and structure |
|
| >pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase Length = 350 | Back alignment and structure |
|
| >pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And Regulatory (Ri{alpha}) Subunits Of Pka Length = 350 | Back alignment and structure |
|
| >pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With Y- 27632 Length = 350 | Back alignment and structure |
|
| >pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To Hydroxyfasudil Length = 351 | Back alignment and structure |
|
| >pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein Kinase A (Pka) Length = 350 | Back alignment and structure |
|
| >pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6 Length = 311 | Back alignment and structure |
|
| >pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of Camp-Dependent Protein Kinase And Adenosine Further Defines Conformational Flexibility Length = 350 | Back alignment and structure |
|
| >pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein Kinase Catalytic Subunit Length = 350 | Back alignment and structure |
|
| >pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of Camp-Dependent Protein Kinase And An Inhibitor Peptide Displays An Open Conformation Length = 350 | Back alignment and structure |
|
| >pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant Catalytic Subunit Of Camp-Dependent Protein Kinase Complexed With The Peptide Inhibitor Pki(5-24) And Adenosine Length = 350 | Back alignment and structure |
|
| >pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6 Length = 321 | Back alignment and structure |
|
| >pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit Of Camp- Dependent Protein Kinase Reveal Open And Closed Conformations Length = 350 | Back alignment and structure |
|
| >pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit (E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24) Isoelectric Variant Ca) And Mn2+ Adenylyl Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c Length = 350 | Back alignment and structure |
|
| >pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead Compound Length = 292 | Back alignment and structure |
|
| >pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent Protein Kinase Length = 350 | Back alignment and structure |
|
| >pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp- Dependent Protein Kinase Complexed With A Substrate Peptide, Adp And Detergent Length = 350 | Back alignment and structure |
|
| >pdb|1Z5M|A Chain A, Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl) Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2- Dimethylpropanediamide Complexed With Human Pdk1 Length = 286 | Back alignment and structure |
|
| >pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent Kinase- 1 (Pdk-1)catalytic Domain Bound To A Dibenzonaphthyridine Inhibitor Length = 312 | Back alignment and structure |
|
| >pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309 | Back alignment and structure |
|
| >pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8 Length = 286 | Back alignment and structure |
|
| >pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3- Phosphoinositide Dependent Kinase (Pdk1) Length = 311 | Back alignment and structure |
|
| >pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Ly333531 Length = 310 | Back alignment and structure |
|
| >pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2 Length = 343 | Back alignment and structure |
|
| >pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length = 314 | Back alignment and structure |
|
| >pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Bim-3 Length = 286 | Back alignment and structure |
|
| >pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through Fragment-Based Lead Discovery Length = 311 | Back alignment and structure |
|
| >pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain Length = 310 | Back alignment and structure |
|
| >pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1 Catalytic Domain Length = 289 | Back alignment and structure |
|
| >pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In Complex With Compound 9 Length = 311 | Back alignment and structure |
|
| >pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i Length = 312 | Back alignment and structure |
|
| >pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent Protein Kinase With Unphosphorylated Activation Loop Length = 371 | Back alignment and structure |
|
| >pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h- Purin-6-yl)-benzyl)-amine Length = 351 | Back alignment and structure |
|
| >pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632 Length = 350 | Back alignment and structure |
|
| >pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric Activator Ps171 Bound To The Pif-Pocket Length = 311 | Back alignment and structure |
|
| >pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic Subunit Of Camp-Dependent Protein Kinase Complexed With A Peptide Inhibitor And Detergent Length = 350 | Back alignment and structure |
|
| >pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka C-Subunit:amp-Pnp:mg2+ Complex Length = 350 | Back alignment and structure |
|
| >pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077) Length = 350 | Back alignment and structure |
|
| >pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With A- 443654 Length = 351 | Back alignment and structure |
|
| >pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain In Complex With Atp Length = 311 | Back alignment and structure |
|
| >pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors In Complex With Protein Kinase A And Mutants Length = 350 | Back alignment and structure |
|
| >pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I) Length = 327 | Back alignment and structure |
|
| >pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of Camp-Dependent Protein Kinase Length = 345 | Back alignment and structure |
|
| >pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit Of Camp- Dependent Protein Kinase Length = 350 | Back alignment and structure |
|
| >pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1 Length = 327 | Back alignment and structure |
|
| >pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory Subunit Of Protein Kinase A That Represents The Inhibited State Length = 350 | Back alignment and structure |
|
| >pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The Catalytic Subunit Of Camp-Dependent Protein Kinase Length = 350 | Back alignment and structure |
|
| >pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 311 | Back alignment and structure |
|
| >pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit Of Camp- Dependent Protein Kinase In Complex With Sp20 And Amp-Pnp Length = 350 | Back alignment and structure |
|
| >pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent Protein Kinase With Unphosphorylated Turn Motif Length = 371 | Back alignment and structure |
|
| >pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With Nms-P937 Length = 311 | Back alignment and structure |
|
| >pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human Pdk1 Complex 2 Length = 311 | Back alignment and structure |
|
| >pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In Complex With A Selective Darpin Length = 315 | Back alignment and structure |
|
| >pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit Of Camp- Dependent Protein Kinase Length = 350 | Back alignment and structure |
|
| >pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A Benzolactam-Derived Inhibitor Length = 333 | Back alignment and structure |
|
| >pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Inhibitor 1f8 Length = 316 | Back alignment and structure |
|
| >pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like Kinase 1 Length = 335 | Back alignment and structure |
|
| >pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536 Length = 294 | Back alignment and structure |
|
| >pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of Camp-Dependent Protein Kinase Length = 350 | Back alignment and structure |
|
| >pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl) Amide Length = 342 | Back alignment and structure |
|
| >pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B (pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3 Peptide Length = 337 | Back alignment and structure |
|
| >pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B Akt By Hydrophobic Motif Phosphorylation Length = 315 | Back alignment and structure |
|
| >pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex With Atp- Competitive Inhibitors Length = 335 | Back alignment and structure |
|
| >pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain Length = 335 | Back alignment and structure |
|
| >pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d With Gsk3 Peptide And Amp-Pnp Length = 336 | Back alignment and structure |
|
| >pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid- Regulated Kinase 1 In Complex With Amp-Pnp Length = 373 | Back alignment and structure |
|
| >pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain Length = 339 | Back alignment and structure |
|
| >pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N- Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 Length = 325 | Back alignment and structure |
|
| >pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric Inhibitor Length = 446 | Back alignment and structure |
|
| >pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex With Flavonoid Glycoside Sl0101 Length = 304 | Back alignment and structure |
|
| >pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin Length = 305 | Back alignment and structure |
|
| >pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex With N-(4- (5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h- Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide Length = 446 | Back alignment and structure |
|
| >pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363 Length = 340 | Back alignment and structure |
|
| >pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor Length = 341 | Back alignment and structure |
|
| >pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate Peptide And Inhibitor Length = 342 | Back alignment and structure |
|
| >pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil Length = 433 | Back alignment and structure |
|
| >pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha (Mrck Alpha) Length = 437 | Back alignment and structure |
|
| >pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1 Length = 415 | Back alignment and structure |
|
| >pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6 Bound To Amppnp Length = 576 | Back alignment and structure |
|
| >pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6 In Complex With Sangivamycin Length = 576 | Back alignment and structure |
|
| >pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain Length = 313 | Back alignment and structure |
|
| >pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1 Length = 328 | Back alignment and structure |
|
| >pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From Crystallographic Fragment Screen Length = 301 | Back alignment and structure |
|
| >pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution Length = 300 | Back alignment and structure |
|
| >pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of P27kip1 Carboxy-Terminal Peptide Length = 320 | Back alignment and structure |
|
| >pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And A Pyrrolo[2,3- A]carbazole Ligand Length = 313 | Back alignment and structure |
|
| >pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its Consensus Peptide Pimtide Length = 313 | Back alignment and structure |
|
| >pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And A Beta Carboline Ligand I Length = 314 | Back alignment and structure |
|
| >pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With Ly333531 Length = 312 | Back alignment and structure |
|
| >pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human Rsk-1 Bound To Amp-Pcp Length = 321 | Back alignment and structure |
|
| >pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071 Length = 360 | Back alignment and structure |
|
| >pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa Length = 300 | Back alignment and structure |
|
| >pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With 4-(4- Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One Length = 328 | Back alignment and structure |
|
| >pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With Inhibitor Length = 333 | Back alignment and structure |
|
| >pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation Length = 293 | Back alignment and structure |
|
| >pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain Length = 306 | Back alignment and structure |
|
| >pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From Crystallographic Fragment Screen Length = 301 | Back alignment and structure |
|
| >pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point Mutations (K299r, T423e) Length = 297 | Back alignment and structure |
|
| >pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From Crystallographic Fragment Screen Length = 301 | Back alignment and structure |
|
| >pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small Molecule Inhibitor Length = 298 | Back alignment and structure |
|
| >pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As Potent, Highly Selective And Orally Bioavailable Pim Kinases Inhibitors Length = 294 | Back alignment and structure |
|
| >pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As Potent Pim-1 Inhibitors Length = 299 | Back alignment and structure |
|
| >pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target Of Aberrant Somatic Hypermutations In Diffuse Large Cell Lymphoma Length = 293 | Back alignment and structure |
|
| >pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And The Jnk Inhibitor V Length = 314 | Back alignment and structure |
|
| >pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261 Length = 313 | Back alignment and structure |
|
| >pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And A Naphtho-Difuran Ligand Length = 313 | Back alignment and structure |
|
| >pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor Length = 276 | Back alignment and structure |
|
| >pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain Length = 311 | Back alignment and structure |
|
| >pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium Complex Lambda-Fl172 Length = 297 | Back alignment and structure |
|
| >pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1 Length = 297 | Back alignment and structure |
|
| >pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7- Azaindole Length = 273 | Back alignment and structure |
|
| >pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1) Length = 350 | Back alignment and structure |
|
| >pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain Length = 306 | Back alignment and structure |
|
| >pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors Length = 273 | Back alignment and structure |
|
| >pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546 Length = 308 | Back alignment and structure |
|
| >pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine Length = 273 | Back alignment and structure |
|
| >pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine Length = 353 | Back alignment and structure |
|
| >pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With Staurosporine At 2a Resolution Length = 345 | Back alignment and structure |
|
| >pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a Resolution. Length = 352 | Back alignment and structure |
|
| >pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In Complex With Sto-609 Length = 298 | Back alignment and structure |
|
| >pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase Length = 314 | Back alignment and structure |
|
| >pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A Ruthenium Organometallic Ligand Ru1 Length = 312 | Back alignment and structure |
|
| >pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662 Length = 279 | Back alignment and structure |
|
| >pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical Protein Kinase C-Iota Length = 364 | Back alignment and structure |
|
| >pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound Length = 279 | Back alignment and structure |
|
| >pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand Length = 279 | Back alignment and structure |
|
| >pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From Par-3 Length = 396 | Back alignment and structure |
|
| >pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor Length = 349 | Back alignment and structure |
|
| >pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C Beta Ii Complexed With A Bisindolylmaleimide Inhibitor Length = 353 | Back alignment and structure |
|
| >pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain Length = 345 | Back alignment and structure |
|
| >pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol (Soak) Length = 688 | Back alignment and structure |
|
| >pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein Kinase C Beta Ii Length = 674 | Back alignment and structure |
|
| >pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits Length = 689 | Back alignment and structure |
|
| >pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled Receptor Kinase 2 And Heterotrimeric G Protein Beta 1 And Gamma 2 Subunits Length = 689 | Back alignment and structure |
|
| >pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits Length = 695 | Back alignment and structure |
|
| >pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1 Length = 328 | Back alignment and structure |
|
| >pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase 32a (Yank1) Length = 384 | Back alignment and structure |
|
| >pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) Length = 304 | Back alignment and structure |
|
| >pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) In Complex With Staurosporine Length = 304 | Back alignment and structure |
|
| >pdb|3A7F|A Chain A, Human Mst3 Kinase Length = 303 | Back alignment and structure |
|
| >pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus SerineTHREONINE KINASE Pknb Length = 294 | Back alignment and structure |
|
| >pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate Ligand Complex Length = 288 | Back alignment and structure |
|
| >pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5 Length = 288 | Back alignment and structure |
|
| >pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5 Length = 288 | Back alignment and structure |
|
| >pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7 Length = 353 | Back alignment and structure |
|
| >pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182 Length = 353 | Back alignment and structure |
|
| >pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3 Length = 353 | Back alignment and structure |
|
| >pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase 1) Length = 294 | Back alignment and structure |
|
| >pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta Length = 294 | Back alignment and structure |
|
| >pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain Length = 331 | Back alignment and structure |
|
| >pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target Length = 303 | Back alignment and structure |
|
| >pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain Length = 290 | Back alignment and structure |
|
| >pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule Inhibitor Length = 368 | Back alignment and structure |
|
| >pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362 | Back alignment and structure |
|
| >pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94 Length = 360 | Back alignment and structure |
|
| >pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol Length = 360 | Back alignment and structure |
|
| >pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75 Length = 360 | Back alignment and structure |
|
| >pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia Length = 329 | Back alignment and structure |
|
| >pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed With A Specific Inhibitor Of Human P38 Map Kinase Length = 380 | Back alignment and structure |
|
| >pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution Length = 543 | Back alignment and structure |
|
| >pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C DOUBLE MUTANT Complexed With Adp And Mg Length = 543 | Back alignment and structure |
|
| >pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1 Bound To Atp And Magnesium Chloride At 2.9a Length = 543 | Back alignment and structure |
|
| >pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1 Bound To Atp And Magnesium Chloride At 2.7a Length = 543 | Back alignment and structure |
|
| >pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp Length = 335 | Back alignment and structure |
|
| >pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In Complex With The Bisindoylmaleide Inhibitor Bim Viii Length = 412 | Back alignment and structure |
|
| >pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor Length = 364 | Back alignment and structure |
|
| >pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57 Length = 360 | Back alignment and structure |
|
| >pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Pyrazolopyridazine Derivative Length = 368 | Back alignment and structure |
|
| >pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362 | Back alignment and structure |
|
| >pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e) Length = 358 | Back alignment and structure |
|
| >pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2 Length = 364 | Back alignment and structure |
|
| >pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With N,n-dimethyl-4-(4- Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide Length = 380 | Back alignment and structure |
|
| >pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX Length = 358 | Back alignment and structure |
|
| >pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Phosphorylated Map Kinase Erk2 Length = 364 | Back alignment and structure |
|
| >pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2 Length = 365 | Back alignment and structure |
|
| >pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Map Kinase Erk2 Length = 365 | Back alignment and structure |
|
| >pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In Complex With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin 2-Yl]amino}phenyl)acetic Acid Length = 366 | Back alignment and structure |
|
| >pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently Bound Length = 357 | Back alignment and structure |
|
| >pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived From Mkp3 Length = 364 | Back alignment and structure |
|
| >pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362 | Back alignment and structure |
|
| >pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric KinaseRNASE Ire1 Length = 448 | Back alignment and structure |
|
| >pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The Kinase-Ribonuclease Domain Of Ire1 Length = 448 | Back alignment and structure |
|
| >pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2 Length = 364 | Back alignment and structure |
|
| >pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine Mutation At Position 52 Length = 364 | Back alignment and structure |
|
| >pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human Protein Kinase Ck2 Length = 329 | Back alignment and structure |
|
| >pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major Length = 360 | Back alignment and structure |
|
| >pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin Length = 434 | Back alignment and structure |
|
| >pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g Hyperactivating Mutant In Apo Form. Length = 303 | Back alignment and structure |
|
| >pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For Catalysis And Regulation Of Non-conventional Splicing Length = 434 | Back alignment and structure |
|
| >pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase Erk1 Length = 382 | Back alignment and structure |
|
| >pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure Length = 309 | Back alignment and structure |
|
| >pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation And Specifity Of A Ste20p Map3k Length = 348 | Back alignment and structure |
|
| >pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase Mst4 In Complex With An Quinazolin Length = 301 | Back alignment and structure |
|
| >pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5- Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide Length = 325 | Back alignment and structure |
|
| >pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded Form) Length = 325 | Back alignment and structure |
|
| >pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase ( Diphosphorylated Form) Bound To 5- Amino-3-((4-( Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide Length = 325 | Back alignment and structure |
|
| >pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha Complex Length = 305 | Back alignment and structure |
|
| >pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis Length = 394 | Back alignment and structure |
|
| >pdb|2WQM|A Chain A, Structure Of Apo Human Nek7 Length = 310 | Back alignment and structure |
|
| >pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Adp Bound Length = 311 | Back alignment and structure |
|
| >pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Indirubin 3'-Monoxime Bound Length = 313 | Back alignment and structure |
|
| >pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild- Type In Apo Form. Length = 303 | Back alignment and structure |
|
| >pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Novel Bosutinib Isoform 1, Previously Thought To Be Bosutinib Length = 293 | Back alignment and structure |
|
| >pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Su11274 Length = 302 | Back alignment and structure |
|
| >pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In Complex With Adp Length = 432 | Back alignment and structure |
|
| >pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP Length = 311 | Back alignment and structure |
|
| >pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant Length = 311 | Back alignment and structure |
|
| >pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb Mutant Kinase Domain In Complex With Kt5720 Length = 311 | Back alignment and structure |
|
| >pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase Kinase 5 Length = 295 | Back alignment and structure |
|
| >pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant (Crystal Form 1) Length = 311 | Back alignment and structure |
|
| >pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycobacterium Tuberculosis Pknb. Length = 311 | Back alignment and structure |
|
| >pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating Kinase 1 (Ask1) With Imidazopyridine Inhibitor Length = 269 | Back alignment and structure |
|
| >pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium Tuberculosis Length = 299 | Back alignment and structure |
|
| >pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum In Complex With Indirubin E804 Length = 383 | Back alignment and structure |
|
| >pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n Inactivating Mutant In Apo Form Length = 303 | Back alignment and structure |
|
| >pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human Tbk1 Kinase- Uld Domain Length = 396 | Back alignment and structure |
|
| >pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7 Length = 346 | Back alignment and structure |
|
| >pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta (I4122) Length = 677 | Back alignment and structure |
|
| >pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta Length = 676 | Back alignment and structure |
|
| >pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase Domain Phosphorylated On Ser172 Length = 319 | Back alignment and structure |
|
| >pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik) Length = 356 | Back alignment and structure |
|
| >pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In Complex With Ch4987655 And Mgamp-Pnp Length = 307 | Back alignment and structure |
|
| >pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex Length = 349 | Back alignment and structure |
|
| >pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 299 | Back alignment and structure |
|
| >pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And Human Ck2alpha' In Complex With A Non-hydrolysable Atp-analogue Length = 349 | Back alignment and structure |
|
| >pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092, Delete A660- T867) At 2.28 A Resolution Length = 299 | Back alignment and structure |
|
| >pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum, Cgd2_1960 Length = 388 | Back alignment and structure |
|
| >pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With Frattide Peptide Length = 378 | Back alignment and structure |
|
| >pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-3beta Inhibitors Length = 371 | Back alignment and structure |
|
| >pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase 3beta In Complex With An Inhibitor Length = 350 | Back alignment and structure |
|
| >pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based Allosteric Inhibitor Xl518 (Gdc-0973), Or Related Analogs. Length = 301 | Back alignment and structure |
|
| >pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex Length = 353 | Back alignment and structure |
|
| >pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective Gsk-3 Inhibitors Length = 367 | Back alignment and structure |
|
| >pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin Peptide And Inhibitor 7d Length = 350 | Back alignment and structure |
|
| >pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor That Attenuates Hyperactivity In Clock Mutant Mice Length = 350 | Back alignment and structure |
|
| >pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex Length = 292 | Back alignment and structure |
|
| >pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A Imidazopyridine Inhibitor Length = 382 | Back alignment and structure |
|
| >pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In Complexed With Inhibitor Length = 414 | Back alignment and structure |
|
| >pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis- (Indole)maleimide Pyridinophane Inhibitor Length = 352 | Back alignment and structure |
|
| >pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With 3-Indolyl-4- Arylmaleimide Inhibitor Length = 391 | Back alignment and structure |
|
| >pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A Benzoimidazol Inhibitor Length = 372 | Back alignment and structure |
|
| >pdb|3E7O|A Chain A, Crystal Structure Of Jnk2 Length = 360 | Back alignment and structure |
|
| >pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796 Length = 364 | Back alignment and structure |
|
| >pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta (Gsk3b) In Complex With Inhibitor 142 Length = 430 | Back alignment and structure |
|
| >pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With Ucb1353770 And Amppnp Length = 304 | Back alignment and structure |
|
| >pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b) Length = 420 | Back alignment and structure |
|
| >pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp Length = 422 | Back alignment and structure |
|
| >pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue Length = 348 | Back alignment and structure |
|
| >pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By Roscovitine, Aloisine And Indirubin. Length = 292 | Back alignment and structure |
|
| >pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor Length = 465 | Back alignment and structure |
|
| >pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain Length = 343 | Back alignment and structure |
|
| >pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine Length = 424 | Back alignment and structure |
|
| >pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D- Ribofuranosylbenzimidazole Length = 334 | Back alignment and structure |
|
| >pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945 Length = 333 | Back alignment and structure |
|
| >pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase (Ttk) In Complex With A Pyrimido-Diazepin Ligand Length = 313 | Back alignment and structure |
|
| >pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In Complex With Atp Length = 342 | Back alignment and structure |
|
| >pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With The Catalytic Subunit Of Protein Kinase Ck2 Length = 335 | Back alignment and structure |
|
| >pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase Ck2alpha With Altered Cosubstrate Specificity Length = 335 | Back alignment and structure |
|
| >pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane Derivative Inhibitor (Cpa) Length = 331 | Back alignment and structure |
|
| >pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1 Catalytic Domain Apo Form Length = 390 | Back alignment and structure |
|
| >pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715 Length = 317 | Back alignment and structure |
|
| >pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase Ck2 Length = 335 | Back alignment and structure |
|
| >pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase (ttk) Length = 313 | Back alignment and structure |
|
| >pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn Length = 330 | Back alignment and structure |
|
| >pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a Mutant In Complex With Sp600125 Inhibitor Length = 390 | Back alignment and structure |
|
| >pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme Length = 337 | Back alignment and structure |
|
| >pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With Emodin At Ph 8.5 Length = 336 | Back alignment and structure |
|
| >pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human Protein Kinase Ck2 Catalytic Subunit Length = 334 | Back alignment and structure |
|
| >pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph 8.5 Length = 328 | Back alignment and structure |
|
| >pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik) Length = 371 | Back alignment and structure |
|
| >pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme Length = 335 | Back alignment and structure |
|
| >pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With The Inhibitor Nu6102 Length = 300 | Back alignment and structure |
|
| >pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein Kinase 6 (Mapk6) Length = 320 | Back alignment and structure |
|
| >pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With 6-Bromoindirubin-3'-Oxime Length = 350 | Back alignment and structure |
|
| >pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With Ellagic Acid Length = 340 | Back alignment and structure |
|
| >pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo Sapiens Length = 350 | Back alignment and structure |
|
| >pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With Atp Length = 302 | Back alignment and structure |
|
| >pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma Length = 367 | Back alignment and structure |
|
| >pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2- Yl)amino]benzamide Length = 320 | Back alignment and structure |
|
| >pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839 Length = 287 | Back alignment and structure |
|
| >pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta. Length = 352 | Back alignment and structure |
|
| >pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed With Inhibitor Pd0407824 Length = 289 | Back alignment and structure |
|
| >pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin Peptide Length = 350 | Back alignment and structure |
|
| >pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770 Length = 285 | Back alignment and structure |
|
| >pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396 Length = 287 | Back alignment and structure |
|
| >pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map Kinase Jnk1 Length = 370 | Back alignment and structure |
|
| >pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map Kinase Jnk1 Length = 370 | Back alignment and structure |
|
| >pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With Atp Length = 299 | Back alignment and structure |
|
| >pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300 | Back alignment and structure |
|
| >pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase (gak) Length = 337 | Back alignment and structure |
|
| >pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-dependent Kinase Inhibitors Identified Through Structure-based Hybridisation Length = 299 | Back alignment and structure |
|
| >pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The Phosphate-responsive Signal Transduction Pathway Length = 317 | Back alignment and structure |
|
| >pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300 | Back alignment and structure |
|
| >pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With Atp Length = 301 | Back alignment and structure |
|
| >pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine Length = 299 | Back alignment and structure |
|
| >pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B Length = 289 | Back alignment and structure |
|
| >pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With 10z-Hymenialdisine Length = 339 | Back alignment and structure |
|
| >pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine Length = 306 | Back alignment and structure |
|
| >pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site Length = 300 | Back alignment and structure |
|
| >pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX WITH THE Inhibitor Meriolin 3 Length = 300 | Back alignment and structure |
|
| >pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A Length = 298 | Back alignment and structure |
|
| >pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With The Inhibitor Indirubin-5-Sulphonate Bound Length = 297 | Back alignment and structure |
|
| >pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed With A 2-arylamino-4-cyclohexylmethyl-5-nitroso-6- aminopyrimidine Inhibitor Length = 302 | Back alignment and structure |
|
| >pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic Length = 298 | Back alignment and structure |
|
| >pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With Atp Length = 301 | Back alignment and structure |
|
| >pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A 2-amino-4- Heteroaryl-pyrimidine Inhibitor Length = 301 | Back alignment and structure |
|
| >pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM IONS Length = 296 | Back alignment and structure |
|
| >pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex Length = 299 | Back alignment and structure |
|
| >pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E Length = 298 | Back alignment and structure |
|
| >pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300 | Back alignment and structure |
|
| >pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine Length = 299 | Back alignment and structure |
|
| >pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED With The Inhibitor Nu2058 Length = 303 | Back alignment and structure |
|
| >pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2 Complexed With A Nucleoside Inhibitor Length = 298 | Back alignment and structure |
|
| >pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide, Compound (S)-8b Length = 299 | Back alignment and structure |
|
| >pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex Length = 298 | Back alignment and structure |
|
| >pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed With A Bisanilinopyrimidine Inhibitor Length = 302 | Back alignment and structure |
|
| >pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137 Length = 309 | Back alignment and structure |
|
| >pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of 8-Anilino-1-Naphthalene Sulfonate Length = 306 | Back alignment and structure |
|
| >pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737 Length = 364 | Back alignment and structure |
|
| >pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A 2-amino-4- Heteroaryl-pyrimidine Inhibitor Length = 331 | Back alignment and structure |
|
| >pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562 Length = 364 | Back alignment and structure |
|
| >pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map Kinase Jnk1 Length = 370 | Back alignment and structure |
|
| >pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From The Structures Cdk6-P19ink4d Inhibitor Complex Length = 326 | Back alignment and structure |
|
| >pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map Kinase Jnk1 Length = 370 | Back alignment and structure |
|
| >pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk Inhibitor For The Prevention Of Ischemia-Reperfusion Injury Length = 464 | Back alignment and structure |
|
| >pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A Dihydroquinazolinone Inhibitor Length = 370 | Back alignment and structure |
|
| >pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774 Length = 355 | Back alignment and structure |
|
| >pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v- H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor Length = 302 | Back alignment and structure |
|
| >pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline Inhibitor Length = 356 | Back alignment and structure |
|
| >pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With Mgamp-Pnp Length = 423 | Back alignment and structure |
|
| >pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And Drb Length = 373 | Back alignment and structure |
|
| >pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb Length = 351 | Back alignment and structure |
|
| >pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3- Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide Length = 365 | Back alignment and structure |
|
| >pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In Complex With A Novel Substituted Indole Inhibitor Length = 339 | Back alignment and structure |
|
| >pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 Length = 331 | Back alignment and structure |
|
| >pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And Thiazole Based Inhibitors Of Jnk For The Treatment Of Neurodegenerative Diseases Length = 362 | Back alignment and structure |
|
| >pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With N-{3-Cyano-6-[3-(1- Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2, 3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide Length = 364 | Back alignment and structure |
|
| >pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral Cyclin Length = 308 | Back alignment and structure |
|
| >pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious Tri-Substituted Thiophene Based Jnk Inhibitor Length = 363 | Back alignment and structure |
|
| >pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor, Sr- 3451 Length = 353 | Back alignment and structure |
|
| >pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole- Pyrimidine Inhibitor Length = 364 | Back alignment and structure |
|
| >pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3 Length = 355 | Back alignment and structure |
|
| >pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3 Length = 356 | Back alignment and structure |
|
| >pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4 Inhibitor Length = 298 | Back alignment and structure |
|
| >pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein Kinase 11 (p38 Beta) In Complex With Nilotinib Length = 348 | Back alignment and structure |
|
| >pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant Length = 360 | Back alignment and structure |
|
| >pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein Kinase Ck2alpha Prime With A Potent Indazole-Derivative Inhibitor Length = 339 | Back alignment and structure |
|
| >pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide Length = 356 | Back alignment and structure |
|
| >pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A Dihydroquinazolinone Length = 370 | Back alignment and structure |
|
| >pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor Length = 307 | Back alignment and structure |
|
| >pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-Dependent Kinase Inhibitors Identified Through Structure-Based Hybridisation Length = 299 | Back alignment and structure |
|
| >pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino Pyrimidine Cdk4 Inhibitor Length = 298 | Back alignment and structure |
|
| >pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map Kinase Jnk1 Length = 370 | Back alignment and structure |
|
| >pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain In Complex With A Monocyclic Pyrazolone Inhibitor Length = 360 | Back alignment and structure |
|
| >pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306 | Back alignment and structure |
|
| >pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38) Length = 360 | Back alignment and structure |
|
| >pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306 | Back alignment and structure |
|
| >pdb|2AAO|A Chain A, Regulatory Apparatus Of Calcium Dependent Protein Kinase From Arabidopsis Thaliana Length = 166 | Back alignment and structure |
|
| >pdb|2AAO|A Chain A, Regulatory Apparatus Of Calcium Dependent Protein Kinase From Arabidopsis Thaliana Length = 166 | Back alignment and structure |
|
| >pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With Its Activating Protein Tab1 Length = 307 | Back alignment and structure |
|
| >pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With Ind E804 Length = 324 | Back alignment and structure |
|
| >pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol Length = 315 | Back alignment and structure |
|
| >pdb|2OZA|B Chain B, Structure Of P38alpha Complex Length = 366 | Back alignment and structure |
|
| >pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant Length = 360 | Back alignment and structure |
|
| >pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306 | Back alignment and structure |
|
| >pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The Docking Site On Its Nuclear Substrate Mef2a Length = 360 | Back alignment and structure |
|
| >pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499 Length = 372 | Back alignment and structure |
|
| >pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P- Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl- Pyridin-3-Yl)naphthalen-1-Yl]urea Length = 348 | Back alignment and structure |
|
| >pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With Inhibitor Pg-874743 Length = 348 | Back alignment and structure |
|
| >pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1) Length = 311 | Back alignment and structure |
|
| >pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl Amide Inhibitor Length = 360 | Back alignment and structure |
|
| >pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase Length = 353 | Back alignment and structure |
|
| >pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In Phosphorylated P38a And In Solution Length = 370 | Back alignment and structure |
|
| >pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine Phosphorylation Regulated Kinase 2 (Dyrk2) Length = 429 | Back alignment and structure |
|
| >pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk Docking Partner Length = 380 | Back alignment and structure |
|
| >pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map Kinase Jnk1 Length = 370 | Back alignment and structure |
|
| >pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655 Length = 379 | Back alignment and structure |
|
| >pdb|4EXU|A Chain A, Mapk13, Inactive Form Length = 371 | Back alignment and structure |
|
| >pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl Amide Inhibitor Length = 360 | Back alignment and structure |
|
| >pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex With An Indirubin Ligand Length = 429 | Back alignment and structure |
|
| >pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk Docking Peptide Length = 362 | Back alignment and structure |
|
| >pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A Dihydroquinolinone Length = 366 | Back alignment and structure |
|
| >pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase Length = 380 | Back alignment and structure |
|
| >pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant Length = 360 | Back alignment and structure |
|
| >pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41 Length = 417 | Back alignment and structure |
|
| >pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With Inhibitor Pg-892579 Length = 348 | Back alignment and structure |
|
| >pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3 Length = 308 | Back alignment and structure |
|
| >pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase Length = 360 | Back alignment and structure |
|
| >pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex Length = 366 | Back alignment and structure |
|
| >pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A Dihydroquinazolinone Inhibitor Length = 366 | Back alignment and structure |
|
| >pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715 Length = 362 | Back alignment and structure |
|
| >pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48 Length = 360 | Back alignment and structure |
|
| >pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121 Length = 362 | Back alignment and structure |
|
| >pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase Length = 367 | Back alignment and structure |
|
| >pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Pyrrole-2- Carboxamide Inhibitor Length = 371 | Back alignment and structure |
|
| >pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In Complex With 4-[3-Methylsulfanylanilino]-6,7- Dimethoxyquinazoline Length = 360 | Back alignment and structure |
|
| >pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole Inhibitor Length = 372 | Back alignment and structure |
|
| >pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195 Length = 372 | Back alignment and structure |
|
| >pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195 Length = 365 | Back alignment and structure |
|
| >pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea Length = 365 | Back alignment and structure |
|
| >pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based Inhibitor Length = 383 | Back alignment and structure |
|
| >pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule Inhibitor Length = 359 | Back alignment and structure |
|
| >pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map Kinase Jnk1 Length = 370 | Back alignment and structure |
|
| >pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor Length = 383 | Back alignment and structure |
|
| >pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl Amide Inhibitor Length = 371 | Back alignment and structure |
|
| >pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995 Length = 379 | Back alignment and structure |
|
| >pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE COMPLEX IN Solution Length = 359 | Back alignment and structure |
|
| >pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1- Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3- Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide Length = 380 | Back alignment and structure |
|
| >pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine Length = 365 | Back alignment and structure |
|
| >pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376 Length = 354 | Back alignment and structure |
|
| >pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase Length = 362 | Back alignment and structure |
|
| >pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor Length = 398 | Back alignment and structure |
|
| >pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex With Dp802 Length = 354 | Back alignment and structure |
|
| >pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole Inhibitor Length = 291 | Back alignment and structure |
|
| >pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule Inhibitor Length = 349 | Back alignment and structure |
|
| >pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map Kinase Length = 360 | Back alignment and structure |
|
| >pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine Length = 351 | Back alignment and structure |
|
| >pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a) Activating Mutant Length = 367 | Back alignment and structure |
|
| >pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And Nck-Interacting Kinase With Wee1chk1 Inhibitor Length = 326 | Back alignment and structure |
|
| >pdb|3HEC|A Chain A, P38 In Complex With Imatinib Length = 348 | Back alignment and structure |
|
| >pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955 Length = 350 | Back alignment and structure |
|
| >pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Ternary Complex With Compound 1, Atp-Gs And Mg2p Length = 360 | Back alignment and structure |
|
| >pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole Inhibitor Length = 290 | Back alignment and structure |
|
| >pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole Inhibitor Length = 291 | Back alignment and structure |
|
| >pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer Length = 395 | Back alignment and structure |
|
| >pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By The Scaffolding Protein Jip1 And Sp600125 Length = 369 | Back alignment and structure |
|
| >pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex With An Mkk5 Binding Fragment Length = 442 | Back alignment and structure |
|
| >pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin Antagonistically Control The Nuclear Shuttling Of Nfat4 Length = 371 | Back alignment and structure |
|
| >pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha Length = 389 | Back alignment and structure |
|
| >pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Length = 370 | Back alignment and structure |
|
| >pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin Antagonistically Control The Nuclear Shuttling Of Nfat4 Length = 386 | Back alignment and structure |
|
| >pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720 Length = 280 | Back alignment and structure |
|
| >pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp Length = 328 | Back alignment and structure |
|
| >pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound Length = 322 | Back alignment and structure |
|
| >pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580 Length = 360 | Back alignment and structure |
|
| >pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360 | Back alignment and structure |
|
| >pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Complex With Ligand And Mgatp Length = 333 | Back alignment and structure |
|
| >pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Complex With Ligand And Mgatp Length = 341 | Back alignment and structure |
|
| >pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex With Two Beta Peptides Mimicking The Architecture Of The Tetrameric Protein Kinase Ck2 Holoenzyme. Length = 332 | Back alignment and structure |
|
| >pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase Ck2 (Alpha-Subunit) And Mg-Amppnp Length = 327 | Back alignment and structure |
|
| >pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc Length = 332 | Back alignment and structure |
|
| >pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l) Activating Mutant Length = 367 | Back alignment and structure |
|
| >pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor Length = 335 | Back alignment and structure |
|
| >pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 312 | Back alignment and structure |
|
| >pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The Inhibitor Luteolin Length = 326 | Back alignment and structure |
|
| >pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In Complex With The Inhibitor 3,4,5,6,7-Pentabromo-1h-Indazole (K64) Length = 327 | Back alignment and structure |
|
| >pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex With The Inhibitor 4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68) Length = 331 | Back alignment and structure |
|
| >pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed With Compound 16 Length = 271 | Back alignment and structure |
|
| >pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s) Activating Mutant Form-A Length = 367 | Back alignment and structure |
|
| >pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A Natural Jnk1 Inhibitor Length = 379 | Back alignment and structure |
|
| >pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro- AnthraquinoneCK2 KINASE COMPLEX Length = 325 | Back alignment and structure |
|
| >pdb|2NRY|A Chain A, Crystal Structure Of Irak-4 Length = 307 | Back alignment and structure |
|
| >pdb|2NRU|A Chain A, Crystal Structure Of Irak-4 Length = 307 | Back alignment and structure |
|
| >pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The Inhibitor Apigenin Length = 326 | Back alignment and structure |
|
| >pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine Derivatives As Potent Inhibitors Of Protein Kinase Ck2 Length = 352 | Back alignment and structure |
|
| >pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In Complex With P38 Map Kinase Length = 360 | Back alignment and structure |
|
| >pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase (nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3) Length = 350 | Back alignment and structure |
|
| >pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx3203 Length = 292 | Back alignment and structure |
|
| >pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form Length = 301 | Back alignment and structure |
|
| >pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif Mutants In Response To Inhibitor Binding Length = 360 | Back alignment and structure |
|
| >pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor Length = 358 | Back alignment and structure |
|
| >pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine Inhibitor Length = 369 | Back alignment and structure |
|
| >pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase Domain Complexed With Amp-Pnp Length = 327 | Back alignment and structure |
|
| >pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx4032 Length = 289 | Back alignment and structure |
|
| >pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors Length = 370 | Back alignment and structure |
|
| >pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360 | Back alignment and structure |
|
| >pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360 | Back alignment and structure |
|
| >pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex Length = 302 | Back alignment and structure |
|
| >pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360 | Back alignment and structure |
|
| >pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase (nik) Length = 352 | Back alignment and structure |
|
| >pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7) Length = 318 | Back alignment and structure |
|
| >pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei, Pb000659.00.0 Length = 432 | Back alignment and structure |
|
| >pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase (nik) Bound To A 2-(aminothiazoly)phenol (cmp2) Length = 336 | Back alignment and structure |
|
| >pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC Length = 405 | Back alignment and structure |
|
| >pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-Thiadiazole- Thiophene Inhibitor Length = 302 | Back alignment and structure |
|
| >pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d) Length = 290 | Back alignment and structure |
|
| >pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A Methanesulfonamide Diaminopyrimidine Inhibitor Length = 276 | Back alignment and structure |
|
| >pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain Length = 332 | Back alignment and structure |
|
| >pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative Length = 281 | Back alignment and structure |
|
| >pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In Complex With Novel Allosteric Inhibitor Length = 304 | Back alignment and structure |
|
| >pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Pyrrolo[2,3- D]thiazole Length = 282 | Back alignment and structure |
|
| >pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In Complex With Adp Length = 286 | Back alignment and structure |
|
| >pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Bis- Anilino Pyrimidine Inhibitor Length = 276 | Back alignment and structure |
|
| >pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And Kinase Domains Of Focal Adhesion Kinase. Length = 276 | Back alignment and structure |
|
| >pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak) Length = 281 | Back alignment and structure |
|
| >pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 302 | Back alignment and structure |
|
| >pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase Containing The Ferm And Kinase Domains Length = 656 | Back alignment and structure |
|
| >pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain Length = 306 | Back alignment and structure |
|
| >pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide Length = 361 | Back alignment and structure |
|
| >pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5) Length = 295 | Back alignment and structure |
|
| >pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex. Length = 284 | Back alignment and structure |
|
| >pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885 Length = 281 | Back alignment and structure |
|
| >pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain Length = 298 | Back alignment and structure |
|
| >pdb|4H58|A Chain A, Braf In Complex With Compound 3 Length = 275 | Back alignment and structure |
|
| >pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With A [1, 3]thiazolo[5,4-B]pyridine Derivative Length = 284 | Back alignment and structure |
|
| >pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With Irreversible Inhibitor Length = 286 | Back alignment and structure |
|
| >pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase Containing The Ferm And Kinase Domains. Length = 656 | Back alignment and structure |
|
| >pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A Tetrahydronaphthalene Inhibitor Length = 282 | Back alignment and structure |
|
| >pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase Length = 307 | Back alignment and structure |
|
| >pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine Inhibitor Length = 306 | Back alignment and structure |
|
| >pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein Kinase Kinase 7 Activated Mutant (S287d, T291d) Length = 318 | Back alignment and structure |
|
| >pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006 Length = 276 | Back alignment and structure |
|
| >pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An Inhibitor Length = 452 | Back alignment and structure |
|
| >pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In A Putative Auto-Inhibition State Length = 340 | Back alignment and structure |
|
| >pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src Tyrosine Kinase Domain Complexed With Imatinib Length = 286 | Back alignment and structure |
|
| >pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src Length = 452 | Back alignment and structure |
|
| >pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation Length = 286 | Back alignment and structure |
|
| >pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase Length = 453 | Back alignment and structure |
|
| >pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2 And Jak3 Kinase Domains In Complex With Cp-690550 And Cmp-6 Length = 318 | Back alignment and structure |
|
| >pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Bis- Anilino Pyrimidine Inhibitor Length = 276 | Back alignment and structure |
|
| >pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor Length = 535 | Back alignment and structure |
|
| >pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly Mutant) In Complex With N6-Benzyl Adp Length = 452 | Back alignment and structure |
|
| >pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006 Length = 276 | Back alignment and structure |
|
| >pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp Length = 354 | Back alignment and structure |
|
| >pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An Aminoisoquinoline Inhibitor Length = 300 | Back alignment and structure |
|
| >pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 277 | Back alignment and structure |
|
| >pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To Vinylsulfonamide- Pyrazolopyrimidine 9 Length = 286 | Back alignment and structure |
|
| >pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii Dihydroquinazoline Inhibitor Length = 307 | Back alignment and structure |
|
| >pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In Complex With The Cancer Drug Imatinib. Length = 286 | Back alignment and structure |
|
| >pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor Mc4b Length = 275 | Back alignment and structure |
|
| >pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene Homologue (V- Fes) Length = 377 | Back alignment and structure |
|
| >pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:s768a Triple Mutant Length = 373 | Back alignment and structure |
|
| >pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Covalent Inhibitor Length = 286 | Back alignment and structure |
|
| >pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase Activity Length = 286 | Back alignment and structure |
|
| >pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742a Triple Mutant Length = 373 | Back alignment and structure |
|
| >pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451 Length = 279 | Back alignment and structure |
|
| >pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor Length = 286 | Back alignment and structure |
|
| >pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The Kinase Domain Of Focal Adhesion Kinase With A Phosphorylated Activation Loop Length = 276 | Back alignment and structure |
|
| >pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742f Triple Mutant Length = 373 | Back alignment and structure |
|
| >pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In Complex With Staurosporine Length = 310 | Back alignment and structure |
|
| >pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16 In Complex With Staurosporine Length = 317 | Back alignment and structure |
|
| >pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis SerineTHREONINE Kinase, Pkne Length = 309 | Back alignment and structure |
|
| >pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f Double Mutant Length = 373 | Back alignment and structure |
|
| >pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs Length = 286 | Back alignment and structure |
|
| >pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To Substrate Kqwdnye[ptyr]iw Length = 371 | Back alignment and structure |
|
| >pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant Length = 373 | Back alignment and structure |
|
| >pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant Length = 373 | Back alignment and structure |
|
| >pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure Length = 344 | Back alignment and structure |
|
| >pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596:y602:s768g Triple Mutant Length = 373 | Back alignment and structure |
|
| >pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Dephosphorylated, Amp-Pnp Bound Length = 373 | Back alignment and structure |
|
| >pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma Viral Oncogene Homologue (V-Fes) In Complex With Staurosporine And A Consensus Peptide Length = 377 | Back alignment and structure |
|
| >pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound Structure Length = 344 | Back alignment and structure |
|
| >pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 373 | Back alignment and structure |
|
| >pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor Awl-Ii- 38.3 Length = 361 | Back alignment and structure |
|
| >pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki Length = 381 | Back alignment and structure |
|
| >pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2 Tyrosine Kinase Catalytic Domain Length = 264 | Back alignment and structure |
|
| >pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase Itk Catalytic Domain With Thienopyrazolylindole Inhibitor 090 Length = 266 | Back alignment and structure |
|
| >pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib Length = 266 | Back alignment and structure |
|
| >pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3 Length = 357 | Back alignment and structure |
|
| >pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a) Length = 306 | Back alignment and structure |
|
| >pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52 Length = 269 | Back alignment and structure |
|
| >pdb|2EU9|A Chain A, Crystal Structure Of Clk3 Length = 355 | Back alignment and structure |
|
| >pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed With Imidazo[1,5-A]quinoxaline Length = 267 | Back alignment and structure |
|
| >pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Cgp77675 Length = 283 | Back alignment and structure |
|
| >pdb|1S6I|A Chain A, Ca2+-Regulatory Region (Cld) From Soybean Calcium-Dependent Protein Kinase-Alpha (Cdpk) In The Presence Of Ca2+ And The Junction Domain (Jd) Length = 188 | Back alignment and structure |
|
| >pdb|1S6I|A Chain A, Ca2+-Regulatory Region (Cld) From Soybean Calcium-Dependent Protein Kinase-Alpha (Cdpk) In The Presence Of Ca2+ And The Junction Domain (Jd) Length = 188 | Back alignment and structure |
|
| >pdb|3PM8|A Chain A, Cad Domain Of Pff0520w, Calcium Dependent Protein Kinase Length = 197 | Back alignment and structure |
|
| >pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1) Length = 307 | Back alignment and structure |
|
| >pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain Length = 291 | Back alignment and structure |
|
| >pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With Vuf 12058 Length = 285 | Back alignment and structure |
|
| >pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2) Length = 368 | Back alignment and structure |
|
| >pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound With A Dfg- Out Inhibitor Ap24589 Length = 284 | Back alignment and structure |
|
| >pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound With Ppy-A Length = 288 | Back alignment and structure |
|
| >pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With Sb203580 Length = 362 | Back alignment and structure |
|
| >pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs Resolution) Length = 362 | Back alignment and structure |
|
| >pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain Length = 283 | Back alignment and structure |
|
| >pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase Complex With Dasatinib Length = 268 | Back alignment and structure |
|
| >pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147 Length = 429 | Back alignment and structure |
|
| >pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory Dimer Length = 316 | Back alignment and structure |
|
| >pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i Mutant In Complex With Dcc-2036 Length = 277 | Back alignment and structure |
|
| >pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain From D. Discoideum Bound To Appcp Length = 287 | Back alignment and structure |
|
| >pdb|1S6J|A Chain A, N-Terminal Region Of The Ca2+-Saturated Calcium Regulatory Domain (Cld) From Soybean Calcium-Dependent Protein Kinase- Alpha (Cdpk) Length = 87 | Back alignment and structure |
|
| >pdb|1S6J|A Chain A, N-Terminal Region Of The Ca2+-Saturated Calcium Regulatory Domain (Cld) From Soybean Calcium-Dependent Protein Kinase- Alpha (Cdpk) Length = 87 | Back alignment and structure |
|
| >pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533) Length = 276 | Back alignment and structure |
|
| >pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287 | Back alignment and structure |
|
| >pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 277 | Back alignment and structure |
|
| >pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From Mycobacterium Tuberculosis In Complex With Tetrahydrobenzothiophene Ax20017 Length = 681 | Back alignment and structure |
|
| >pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325 | Back alignment and structure |
|
| >pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine- Phosphorylation-Regulated Kinase 1a Length = 382 | Back alignment and structure |
|
| >pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX Length = 368 | Back alignment and structure |
|
| >pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287 | Back alignment and structure |
|
| >pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex Length = 329 | Back alignment and structure |
|
| >pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An Arylamide Inhibitor Length = 333 | Back alignment and structure |
|
| >pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib Length = 336 | Back alignment and structure |
|
| >pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41 Length = 382 | Back alignment and structure |
|
| >pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571 Inhibition Of C- Kit Tyrosine Kinase Length = 331 | Back alignment and structure |
|
| >pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib Length = 336 | Back alignment and structure |
|
| >pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571 Inhibition Of C-kit Tyrosine Kinase Length = 313 | Back alignment and structure |
|
| >pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With The Inhibitor Pha-739358 Length = 286 | Back alignment and structure |
|
| >pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325 | Back alignment and structure |
|
| >pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A Pyrimidinopyridone Inhibitor Length = 333 | Back alignment and structure |
|
| >pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer Length = 319 | Back alignment and structure |
|
| >pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant Length = 483 | Back alignment and structure |
|
| >pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain Length = 360 | Back alignment and structure |
|
| >pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1 Length = 290 | Back alignment and structure |
|
| >pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase In Yeast Length = 373 | Back alignment and structure |
|
| >pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone Inhibitor Length = 335 | Back alignment and structure |
|
| >pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2 With A [1, 3]thiazolo[5,4-B]pyridine Derivative Length = 318 | Back alignment and structure |
|
| >pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp Length = 298 | Back alignment and structure |
|
| >pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With Bound Adp Length = 373 | Back alignment and structure |
|
| >pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein Kinase Length = 333 | Back alignment and structure |
|
| >pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor 1 Length = 317 | Back alignment and structure |
|
| >pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase In Complex With Arq 069 Length = 306 | Back alignment and structure |
|
| >pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea Inhibitor Length = 316 | Back alignment and structure |
|
| >pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fibroblast Growth Factor Receptor 1 Length = 310 | Back alignment and structure |
|
| >pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast Growth Factor Receptor 1 In Complex With 5-(2-Thienyl) Nicotinic Acid Length = 317 | Back alignment and structure |
|
| >pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase Domain With 3-(2,6-Dichloro-3, 5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1- Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398) Length = 382 | Back alignment and structure |
|
| >pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr) Kinase Domain Length = 316 | Back alignment and structure |
|
| >pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor Receptor 1 Kinase Domain In Complex With Compound 1 Length = 309 | Back alignment and structure |
|
| >pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy) Quinolin-4-Yloxy)benzofuran-3-Carboxamide) Length = 316 | Back alignment and structure |
|
| >pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase Domains) In Complex With Axitinib (Ag-013736) (N-Methyl-2-( 3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)- Benzamide) Length = 353 | Back alignment and structure |
|
| >pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3- Methoxybenzyl)-7-Azaindole Length = 302 | Back alignment and structure |
|
| >pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In Complex With Substrates Length = 326 | Back alignment and structure |
|
| >pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120 Length = 316 | Back alignment and structure |
|
| >pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyridyl-Pyrimidine Benzimidazole Inhibitor Length = 314 | Back alignment and structure |
|
| >pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With 2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic Acid ((s)-1,2,2-trimethyl-propyl)-amide Length = 314 | Back alignment and structure |
|
| >pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyrazolone Inhibitor Length = 314 | Back alignment and structure |
|
| >pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site Inhibitor Showing High Selectivity Within The Janus Kinase Family Length = 315 | Back alignment and structure |
|
| >pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 3,4,5-Trimethoxy Aniline Containing Pyrimidine Length = 309 | Back alignment and structure |
|
| >pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 3,4,5-Trimethoxy Aniline Containing Pyrimidine Length = 309 | Back alignment and structure |
|
| >pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2 And Jak3 Kinase Domains In Complex With Cp-690550 And Cmp-6 Length = 327 | Back alignment and structure |
|
| >pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain Length = 263 | Back alignment and structure |
|
| >pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain Length = 267 | Back alignment and structure |
|
| >pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel 4-amino-furo[2,3-d]pyrimidine Length = 316 | Back alignment and structure |
|
| >pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain Length = 298 | Back alignment and structure |
|
| >pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain Of Csf-1r Length = 329 | Back alignment and structure |
|
| >pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase Domain Length = 317 | Back alignment and structure |
|
| >pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex With Inhibitor Cgi1746 Length = 271 | Back alignment and structure |
|
| >pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With Compound 7 Length = 298 | Back alignment and structure |
|
| >pdb|1EH4|A Chain A, Binary Complex Of Casein Kinase-1 From S. Pombe With An Atp Competitive Inhibitor, Ic261 Length = 298 | Back alignment and structure |
|
| >pdb|2CSN|A Chain A, Binary Complex Of Casein Kinase-1 With Cki7 Length = 297 | Back alignment and structure |
|
| >pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Nicotinamide Inhibitor Length = 314 | Back alignment and structure |
|
| >pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii Inhibtor Nvp-Bbt594 Length = 295 | Back alignment and structure |
|
| >pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2 Length = 298 | Back alignment and structure |
|
| >pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii, 25.M01780 Or Tgme49_007820 Length = 458 | Back alignment and structure |
|
| >pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 326 | Back alignment and structure |
|
| >pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With 2-Isopropyl-7- (4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3- Ylamino)-2h- Phthalazin-1-One Length = 274 | Back alignment and structure |
|
| >pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine Kinase Bound To A Pyrrolopyrimidine-Containing Compound Length = 283 | Back alignment and structure |
|
| >pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyridinyl-Triazine Inhibitor Length = 314 | Back alignment and structure |
|
| >pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase Domain Of Csf-1r Length = 324 | Back alignment and structure |
|
| >pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302 | Back alignment and structure |
|
| >pdb|1RJB|A Chain A, Crystal Structure Of Flt3 Length = 344 | Back alignment and structure |
|
| >pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In Rodent Cancer Tumor Models Length = 297 | Back alignment and structure |
|
| >pdb|3GNI|B Chain B, Structure Of Strad And Mo25 Length = 389 | Back alignment and structure |
|
| >pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine Inhibitor Length = 301 | Back alignment and structure |
|
| >pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8 Length = 300 | Back alignment and structure |
|
| >pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8 Length = 298 | Back alignment and structure |
|
| >pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors Length = 293 | Back alignment and structure |
|
| >pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha Complex Length = 373 | Back alignment and structure |
|
| >pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A Potent And Specific Pan-Janus Kinase Inhibitor Length = 293 | Back alignment and structure |
|
| >pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2 Length = 301 | Back alignment and structure |
|
| >pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent 2,8-Diaryl Quinoxaline Inhibitor Length = 295 | Back alignment and structure |
|
| >pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor Length = 303 | Back alignment and structure |
|
| >pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors Length = 311 | Back alignment and structure |
|
| >pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective Inhibitors Of Jak2 Length = 313 | Back alignment and structure |
|
| >pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex With A Staurosporine Analogue Length = 290 | Back alignment and structure |
|
| >pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain Length = 308 | Back alignment and structure |
|
| >pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K659n Mutation Responsible For An Unclassified Craniosynostosis Syndrome. Length = 324 | Back alignment and structure |
|
| >pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 263 | Back alignment and structure |
|
| >pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With Staurosporine Length = 283 | Back alignment and structure |
|
| >pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In Complex With Inhibitor Staurosporine Length = 278 | Back alignment and structure |
|
| >pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2 Length = 289 | Back alignment and structure |
|
| >pdb|3O77|A Chain A, The Structure Of Ca2+ Sensor (Case-16) Length = 415 | Back alignment and structure |
|
| >pdb|3SG2|A Chain A, Crystal Structure Of Gcamp2-T116v,D381y Length = 449 | Back alignment and structure |
|
| >pdb|3EK8|A Chain A, Calcium-Saturated Gcamp2 T116vG87R MUTANT MONOMER Length = 449 | Back alignment and structure |
|
| >pdb|3SG6|A Chain A, Crystal Structure Of Dimeric Gcamp2-Lia(Linker 1) Length = 450 | Back alignment and structure |
|
| >pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic N549h Mutation Responsible For Crouzon Syndrome. Length = 324 | Back alignment and structure |
|
| >pdb|3O78|A Chain A, The Structure Of Ca2+ Sensor (Case-12) Length = 415 | Back alignment and structure |
|
| >pdb|3EVU|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2, (#1) Length = 449 | Back alignment and structure |
|
| >pdb|3EVR|A Chain A, Crystal Structure Of Calcium Bound Monomeric Gcamp2 Length = 411 | Back alignment and structure |
|
| >pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length Carboxyl-Terminal Src Kinase At 2.5 A Resolution Length = 450 | Back alignment and structure |
|
| >pdb|1FVR|A Chain A, Tie2 Kinase Domain Length = 327 | Back alignment and structure |
|
| >pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In Complex With Substrates Length = 326 | Back alignment and structure |
|
| >pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r In Complex With Dasatinib Length = 265 | Back alignment and structure |
|
| >pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of Triazine Derivatives As Potent, Selective Tie-2 Inhibitors Length = 317 | Back alignment and structure |
|
| >pdb|3SG3|A Chain A, Crystal Structure Of Gcamp3-D380y Length = 449 | Back alignment and structure |
|
| >pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic N549t Mutation Responsible For Pfeiffer Syndrome Length = 324 | Back alignment and structure |
|
| >pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K526e Mutation Responsible For Crouzon Syndrome Length = 324 | Back alignment and structure |
|
| >pdb|3SG5|A Chain A, Crystal Structure Of Dimeric Gcamp3-D380y, Qp(Linker 1), Lp(Linker 2) Length = 448 | Back alignment and structure |
|
| >pdb|3SG4|A Chain A, Crystal Structure Of Gcamp3-D380y, Lp(Linker 2) Length = 448 | Back alignment and structure |
|
| >pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And Inactive Conformations Suggests A Mechanism Of Activation For Tec Family Kinases Length = 283 | Back alignment and structure |
|
| >pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2 (Erbb2). Length = 338 | Back alignment and structure |
|
| >pdb|3SG7|A Chain A, Crystal Structure Of Gcamp3-Kf(Linker 1) Length = 448 | Back alignment and structure |
|
| >pdb|3A4O|X Chain X, Lyn Kinase Domain Length = 286 | Back alignment and structure |
|
| >pdb|1XFU|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) Truncation Mutant, Ef-delta 64 In Complex With Calmodulin Length = 149 | Back alignment and structure |
|
| >pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain Length = 299 | Back alignment and structure |
|
| >pdb|3EKH|A Chain A, Calcium-Saturated Gcamp2 T116vK378W MUTANT MONOMER Length = 449 | Back alignment and structure |
|
| >pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain Length = 316 | Back alignment and structure |
|
| >pdb|3U0K|A Chain A, Crystal Structure Of The Genetically Encoded Calcium Indicator Rcamp Length = 440 | Back alignment and structure |
|
| >pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1 Length = 317 | Back alignment and structure |
|
| >pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase In Complex With Arq 069 Length = 313 | Back alignment and structure |
|
| >pdb|3B2T|A Chain A, Structure Of Phosphotransferase Length = 311 | Back alignment and structure |
|
| >pdb|1CKJ|A Chain A, Casein Kinase I Delta Truncation Mutant Containing Residues 1-317 Complex With Bound Tungstate Length = 317 | Back alignment and structure |
|
| >pdb|3UYS|A Chain A, Crystal Structure Of Apo Human Ck1d Length = 296 | Back alignment and structure |
|
| >pdb|2F2O|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A New Way Of Making An Old Binding Mode Length = 179 | Back alignment and structure |
|
| >pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild Type Fgf Receptor 2 (Fgfr2) Kinase Domain Length = 370 | Back alignment and structure |
|
| >pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K641r Mutation Responsible For Pfeiffer Syndrome Length = 324 | Back alignment and structure |
|
| >pdb|1VRK|A Chain A, The 1.9 Angstrom Structure Of E84k-Calmodulin Rs20 Peptide Complex Length = 148 | Back alignment and structure |
|
| >pdb|1EXR|A Chain A, The 1.0 Angstrom Crystal Structure Of Ca+2 Bound Calmodulin Length = 148 | Back alignment and structure |
|
| >pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A Thiazolopyrimidine Inhibitor Length = 324 | Back alignment and structure |
|
| >pdb|4HNI|A Chain A, Crystal Structure Of Ck1e In Complex With Pf4800567 Length = 296 | Back alignment and structure |
|
| >pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 269 | Back alignment and structure |
|
| >pdb|4DJC|A Chain A, 1.35 A Crystal Structure Of The Nav1.5 Diii-Iv-CaCAM COMPLEX Length = 152 | Back alignment and structure |
|
| >pdb|2BE6|A Chain A, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM COMPLEX Length = 150 | Back alignment and structure |
|
| >pdb|1IQ5|A Chain A, CalmodulinNEMATODE CA2+CALMODULIN DEPENDENT KINASE KINASE Fragment Length = 149 | Back alignment and structure |
|
| >pdb|2YGG|B Chain B, Complex Of Cambr And Cam Length = 150 | Back alignment and structure |
|
| >pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase Length = 318 | Back alignment and structure |
|
| >pdb|2WEL|D Chain D, Crystal Structure Of Su6656-Bound CalciumCALMODULIN- Dependent Protein Kinase Ii Delta In Complex With Calmodulin Length = 150 | Back alignment and structure |
|
| >pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The Dually-Phosphorylated, Activated State Length = 308 | Back alignment and structure |
|
| >pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In Complex With An Mk-2461 Analog With Specificity For The Activated Receptor Length = 307 | Back alignment and structure |
|
| >pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic E565a Mutation Responsible For Pfeiffer Syndrome Length = 324 | Back alignment and structure |
|
| >pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor. Length = 310 | Back alignment and structure |
|
| >pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain Of C-Met Length = 306 | Back alignment and structure |
|
| >pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor Length = 298 | Back alignment and structure |
|
| >pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor Length = 319 | Back alignment and structure |
|
| >pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine Inhibitor 13 Length = 309 | Back alignment and structure |
|
| >pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880 (Gsk1 Length = 302 | Back alignment and structure |
|
| >pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor Length = 292 | Back alignment and structure |
|
| >pdb|3EWT|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide Length = 154 | Back alignment and structure |
|
| >pdb|1CM1|A Chain A, Motions Of Calmodulin-Single-Conformer Refinement Length = 148 | Back alignment and structure |
|
| >pdb|2BKH|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Structure Length = 149 | Back alignment and structure |
|
| >pdb|1CDL|A Chain A, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms Structure Of A Calmodulin-Peptide Complex Length = 147 | Back alignment and structure |
|
| >pdb|2VAY|A Chain A, Calmodulin Complexed With Cav1.1 Iq Peptide Length = 146 | Back alignment and structure |
|
| >pdb|1CDM|A Chain A, Modulation Of Calmodulin Plasticity In Molecular Recognition On The Basis Of X-Ray Structures Length = 144 | Back alignment and structure |
|
| >pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic E565g Mutation Responsible For Pfeiffer Syndrome Length = 324 | Back alignment and structure |
|
| >pdb|4GOW|D Chain D, Crystal Structure Of Ca2+CAM:KV7.4 (KCNQ4) B HELIX COMPLEX Length = 144 | Back alignment and structure |
|
| >pdb|1PRW|A Chain A, Crystal Structure Of Bovine Brain Ca++ Calmodulin In A Compact Form Length = 149 | Back alignment and structure |
|
| >pdb|1UP5|B Chain B, Chicken Calmodulin Length = 148 | Back alignment and structure |
|
| >pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1 Length = 317 | Back alignment and structure |
|
| >pdb|1OOJ|A Chain A, Structural Genomics Of Caenorhabditis Elegans : Calmodulin Length = 149 | Back alignment and structure |
|
| >pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp Analog And Substrate Peptide Length = 334 | Back alignment and structure |
|
| >pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains Trapped In Trans-Phosphorylation Reaction Length = 334 | Back alignment and structure |
|
| >pdb|3QRX|A Chain A, Chlamydomonas Reinhardtii Centrin Bound To Melittin Length = 169 | Back alignment and structure |
|
| >pdb|2LV6|A Chain A, The Complex Between Ca-calmodulin And Skeletal Muscle Myosin Light Chain Kinase From Combination Of Nmr And Aqueous And Contrast-matched Saxs Data Length = 148 | Back alignment and structure |
|
| >pdb|2IX7|A Chain A, Structure Of Apo-Calmodulin Bound To Unconventional Myosin V Length = 145 | Back alignment and structure |
|
| >pdb|2VB6|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta Insert1) Post-Rigor State ( Crystal Form 2) Length = 149 | Back alignment and structure |
|
| >pdb|1QS7|A Chain A, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide Complex Length = 145 | Back alignment and structure |
|
| >pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With The Microbial Alkaloid K-252a Length = 312 | Back alignment and structure |
|
| >pdb|1QTX|A Chain A, The 1.65 Angstrom Structure Of Calmodulin Rs20 Peptide Complex Length = 148 | Back alignment and structure |
|
| >pdb|2LHI|A Chain A, Solution Structure Of Ca2+CNA1 PEPTIDE-Bound Ycam Length = 176 | Back alignment and structure |
|
| >pdb|1CLM|A Chain A, Structure Of Paramecium Tetraurelia Calmodulin At 1.8 Angstroms Resolution Length = 148 | Back alignment and structure |
|
| >pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With A Aminopyridine Based Inhibitor Length = 314 | Back alignment and structure |
|
| >pdb|2BBM|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex By Multidimensional Nmr Length = 148 | Back alignment and structure |
|
| >pdb|1AHR|A Chain A, Calmodulin Mutant With A Two Residue Deletion In The Central Helix Length = 146 | Back alignment and structure |
|
| >pdb|4DS7|A Chain A, Crystal Structure Of Yeast Calmodulin Bound To The C-Terminal Fragment Of Spindle Pole Body Protein Spc110 Length = 147 | Back alignment and structure |
|
| >pdb|2K0J|A Chain A, Solution Structure Of Cam Complexed To Drp1p Length = 148 | Back alignment and structure |
|
| >pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With 6-Benzyloxyquinoline Inhibitor Length = 319 | Back alignment and structure |
|
| >pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972 Length = 314 | Back alignment and structure |
|
| >pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With Kinase Pto Length = 327 | Back alignment and structure |
|
| >pdb|3E7E|A Chain A, Structure And Substrate Recruitment Of The Human Spindle Checkpoint Kinase Bub Length = 365 | Back alignment and structure |
|
| >pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With A Pyrrolotriazine Based Inhibitor Length = 373 | Back alignment and structure |
|
| >pdb|1DEG|A Chain A, The Linker Of Des-Glu84 Calmodulin Is Bent As Seen In The Crystal Structure Length = 142 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486 | Back alignment and structure |
|---|
Score = 540 bits (1394), Expect = 0.0
Identities = 149/482 (30%), Positives = 239/482 (49%), Gaps = 33/482 (6%)
Query: 1 MGCSVSKNQRDPILGKAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKP 60
M + L Y MLG+G FG C + T + YA K I K
Sbjct: 1 MHHHHHHSSGRENLYF-QGTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKA- 58
Query: 61 KMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGY 120
+ + I RE+++ L PN+++ ED ++ ++V EL GG+LFD II +
Sbjct: 59 SAKNKDTSTILREVELLKKLD-HPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKR 117
Query: 121 NSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEG 180
SE DAA +++ + + + H ++HRDLKPEN S++ + +K+ DFG + F++
Sbjct: 118 FSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN 177
Query: 181 QVYRDIVGSGFYIAPEVLRRRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQG 240
+D +G+ +YIAPEVLR Y ++ D+WSAGVILYILLSG PPF+ + + + G
Sbjct: 178 TKMKDRIGTAYYIAPEVLRGTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETG 237
Query: 241 EIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLR----ESGEASD---DT 293
+ FD W +IS AKDL+R+MLT P RITA Q LEHPW++ E+ SD
Sbjct: 238 KYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQKYSSETPTISDLPSLE 297
Query: 294 SVILRMKQFRRMNKLKKLTIKVIVEYLPD-EETQALKEKFIEMDTDKNGTLSYDELRAGL 352
S + ++QF+ KL + + + L +ET+ L E F ++DT+ +G L DEL G
Sbjct: 298 SAMTNIRQFQAEKKLAQAALLYMASKLTTLDETKQLTEIFRKLDTNNDGMLDRDELVRGY 357
Query: 353 TKV--------------GSMLTEFDVKHLMEA--VKNSSTLE-----SLCENLPTKEKQ- 390
+ E + LM + S ++E + + +
Sbjct: 358 HEFMRLKGVDSNSLIQNEGSTIEDQIDSLMPLLDMDGSGSIEYSEFIASAIDRTILLSRE 417
Query: 391 KLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVN 450
++ F+ D D S ++ EL ++ S+++ E+ +E D + +G +D EFV
Sbjct: 418 RMERAFKMFDKDGSGKISTKELFKLFSQADSSIQMEELESIIEQVDNNKDGEVDFNEFVE 477
Query: 451 LM 452
++
Sbjct: 478 ML 479
|
| >3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494 | Back alignment and structure |
|---|
Score = 534 bits (1377), Expect = 0.0
Identities = 135/470 (28%), Positives = 242/470 (51%), Gaps = 28/470 (5%)
Query: 7 KNQRDPILGKAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAE 66
+ + + Y + LG G +G LC + T+ A K I K + +
Sbjct: 21 QATPGMFITSKKGHLSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKT-SVSTSS 79
Query: 67 NDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDA 126
N + E+ + L PN+++ +ED+ ++VME +GG+LFD II + +E DA
Sbjct: 80 NSKLLEEVAVLKLLD-HPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDA 138
Query: 127 ATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDI 186
A +++ +++ V H ++HRDLKPEN S++ +AL+K+ DFG + +FE + ++
Sbjct: 139 AVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKER 198
Query: 187 VGSGFYIAPEVLRRRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDT 246
+G+ +YIAPEVLR++Y ++ D+WS GVIL+ILL+G PPF +T + + +G+ FD+
Sbjct: 199 LGTAYYIAPEVLRKKYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTFDS 258
Query: 247 DPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASD-------DTSVILRM 299
W ++S AKDL+++ML D +RRI+A Q LEHPW++E + + I M
Sbjct: 259 PEWKNVSEGAKDLIKQMLQFDSQRRISAQQALEHPWIKEMCSKKESGIELPSLANAIENM 318
Query: 300 KQFRRMNKLKKLTIKVIVEYL-PDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGS- 357
++F+ KL + + + L EET+ L + F +D + +G L EL G +K+
Sbjct: 319 RKFQNSQKLAQAALLYMASKLTSQEETKELTDIFRHIDKNGDGQLDRQELIDGYSKLSGE 378
Query: 358 -------MLTEFDVKHLMEA--VKNSSTLE-----SLCENLPTKEKQ-KLMEKFREMDTD 402
E +V ++ A + ++ ++ + + + KL F++ D D
Sbjct: 379 EVAVFDLPQIESEVDAILGAADFDRNGYIDYSEFVTVAMDRKSLLSKDKLESAFQKFDQD 438
Query: 403 NSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLM 452
+ +++ EL + LE + + D + +G++D EF ++
Sbjct: 439 GNGKISVDELASVFGLDH--LESKTWKEMISGIDSNNDGDVDFEEFCKMI 486
|
| >3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484 | Back alignment and structure |
|---|
Score = 532 bits (1373), Expect = 0.0
Identities = 136/472 (28%), Positives = 236/472 (50%), Gaps = 29/472 (6%)
Query: 7 KNQRDPILGKAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAE 66
+ + Y R+LG+G FG LC + T + A K I+K+ + +
Sbjct: 10 HATPGMFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTD 69
Query: 67 NDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDA 126
+ + RE+Q+ L PN+++ +ED+ ++V E+ GG+LFD II++ SE DA
Sbjct: 70 KESLLREVQLLKQLD-HPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDA 128
Query: 127 ATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDI 186
A ++R +++ + H ++HRDLKPEN S+ +A +++ DFG + FE + +D
Sbjct: 129 ARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDK 188
Query: 187 VGSGFYIAPEVLRRRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDT 246
+G+ +YIAPEVL Y ++ D+WS GVILYILLSG PPF + + +G+ F+
Sbjct: 189 IGTAYYIAPEVLHGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFEL 248
Query: 247 DPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLR---ESGEASD---DTSVILRMK 300
W +S +AKDL+R+MLT P RI+A L+H W++ + + D + IL ++
Sbjct: 249 PQWKKVSESAKDLIRKMLTYVPSMRISARDALDHEWIQTYTKEQISVDVPSLDNAILNIR 308
Query: 301 QFRRMNKLKKLTIKVIVEYLPD-EETQALKEKFIEMDTDKNGTLSYDELRAGLTKV---- 355
QF+ KL + + + L +ET+ L F +MD + +G L EL G ++
Sbjct: 309 QFQGTQKLAQAALLYMGSKLTSQDETKELTAIFHKMDKNGDGQLDRAELIEGYKELMRMK 368
Query: 356 -------GSMLTEFDVKHLMEA--VKNSSTLE-----SLCENLPTKEKQ-KLMEKFREMD 400
+ E +V +++A + +E ++ + T + +L FR D
Sbjct: 369 GQDASMLDASAVEHEVDQVLDAVDFDKNGYIEYSEFVTVAMDRKTLLSRERLERAFRMFD 428
Query: 401 TDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLM 452
+DNS ++ +EL ++ + D + +G +D EF ++
Sbjct: 429 SDNSGKISSTELATIFGVSD--VDSETWKSVLSEVDKNNDGEVDFDEFQQML 478
|
| >3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504 | Back alignment and structure |
|---|
Score = 530 bits (1367), Expect = 0.0
Identities = 134/479 (27%), Positives = 225/479 (46%), Gaps = 36/479 (7%)
Query: 7 KNQRDPILGKAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKK------- 59
+ K + YF R LG G +G LC E + + A K I K
Sbjct: 20 AINPGMYVRKKEGKIGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRY 79
Query: 60 ---PKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRII 116
K ++ I EI + L PN+++ +ED+ ++V E EGG+LF++II
Sbjct: 80 SDDNKNIEKFHEEIYNEISLLKSLD-HPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQII 138
Query: 117 AKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALL 176
+ E DAA +++ I++ + H ++HRD+KPEN +++ +K+ DFG +
Sbjct: 139 NRHKFDECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSF 198
Query: 177 FEEGQVYRDIVGSGFYIAPEVLRRRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDA 236
F + RD +G+ +YIAPEVL+++Y ++ D+WS GVI+YILL G PPF + +
Sbjct: 199 FSKDYKLRDRLGTAYYIAPEVLKKKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKK 258
Query: 237 ILQGEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASD----- 291
+ +G+ FD + W +IS AK+L++ MLT D +R TA + L W+++ +
Sbjct: 259 VEKGKYYFDFNDWKNISDEAKELIKLMLTYDYNKRCTAEEALNSRWIKKYANNINKSDQK 318
Query: 292 -DTSVILRMKQFRRMNKLKKLTIKVIVEYLPD-EETQALKEKFIEMDTDKNGTLSYDELR 349
+ M++F KL + I I L EE + L + F ++D + +G L EL
Sbjct: 319 TLCGALSNMRKFEGSQKLAQAAILFIGSKLTTLEERKELTDIFKKLDKNGDGQLDKKELI 378
Query: 350 AGLTKVGSM--------LTEFDVKHLMEA--VKNSSTLE-----SLCENLPTKEKQ-KLM 393
G + + E +V ++++ + +E S+C + + +L
Sbjct: 379 EGYNVLRNFKNELGELKNVEEEVDNILKEVDFDKNGYIEYSEFISVCMDKQILFSEERLR 438
Query: 394 EKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLM 452
F DTD S +T EL + E N + D + + ID EFV++M
Sbjct: 439 RAFNLFDTDKSGKITKEELANLFGLTS--ISEKTWNDVLGEADQNKDNMIDFDEFVSMM 495
|
| >3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} Length = 444 | Back alignment and structure |
|---|
Score = 497 bits (1283), Expect = e-175
Identities = 130/449 (28%), Positives = 208/449 (46%), Gaps = 32/449 (7%)
Query: 19 EDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRL 78
Y LG+G F V C + + YA I K K+ ++ + RE +I
Sbjct: 7 TRFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTK-KLSARDHQKLEREARI-C 64
Query: 79 YLSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVN 138
L PN+V + +E +++ +L GG+LF+ I+A+ Y SE DA+ ++ I+ AV
Sbjct: 65 RLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVL 124
Query: 139 VCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFE-EGQVYRDIVGSGFYIAPEV 197
CH MGV+HR+LKPEN S+ A +K+ DFG A+ E E Q + G+ Y++PEV
Sbjct: 125 HCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEV 184
Query: 198 LRRR-YGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTA 256
LR+ YGK +D+W+ GVILYILL G PPFW E + Y I G DF + W +++ A
Sbjct: 185 LRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEA 244
Query: 257 KDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASD---DTSVILRMKQFRRMNKLKK--L 311
KDL+ +MLT +P +RITAA+ L+HPW+ + + +K+F KLK L
Sbjct: 245 KDLINKMLTINPSKRITAAEALKHPWISHRSTVASCMHRQETVDCLKKFNARRKLKGAIL 304
Query: 312 TIKVIVEYLPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAV 371
T+ + + + +K ++ NG ++ + + +L+E +
Sbjct: 305 TVMLATRNFSVRKQEIIKVTEQLIEAISNGD--FESYTKMCDPGMTAFEPEALGNLVEGL 362
Query: 372 KNSSTLESLCENLPTKEK----QKLMEKFREMDTDNSDTLTLSELKAGLAKLGSA----L 423
ENL ++ ++ + D S + + L G
Sbjct: 363 DFH---RFYFENLWSRNSKPVHTTILNPHIHLMGDESACIAYIRITQYLDAGGIPRTAQS 419
Query: 424 EESEVNQYMEAGDIDGNGNIDSIEFVNLM 452
EE+ V +G + V+
Sbjct: 420 EETRV-------WHRRDG---KWQIVHFH 438
|
| >2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B Length = 362 | Back alignment and structure |
|---|
Score = 478 bits (1232), Expect = e-168
Identities = 106/358 (29%), Positives = 173/358 (48%), Gaps = 10/358 (2%)
Query: 4 SVSKNQRDPILGKAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMR 63
+ + A +Y LG+G F V C +T +A K I K K+
Sbjct: 10 GQQMGRGSEFMMNASTKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTK-KLS 68
Query: 64 LAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSE 123
+ + RE +I L PN+V + ++E+ ++V +L GG+LF+ I+A+ + SE
Sbjct: 69 ARDFQKLEREARICRKLQ-HPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSE 127
Query: 124 RDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVY 183
DA+ ++ I+ ++ CHS G++HR+LKPEN S+ A +K+ DFG A+ + + +
Sbjct: 128 ADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAW 187
Query: 184 RDIVGSGFYIAPEVLRRR-YGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEI 242
G+ Y++PEVL++ Y K +DIW+ GVILYILL G PPFW E + Y I G
Sbjct: 188 HGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAY 247
Query: 243 DFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASD---DTSVILRM 299
D+ + W +++ AK L+ MLT +PK+RITA Q L+ PW+ + + +
Sbjct: 248 DYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKVPWICNRERVASAIHRQDTVDCL 307
Query: 300 KQFRRMNKLKKLTIKVIVEYLPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGS 357
K+F KLK + ++ L + + E +
Sbjct: 308 KKFNARRKLKGAILTTMIA---TRNLSNLGRNLLNKKEQGPPSTIK-ESSESSQTIDD 361
|
| >3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351 | Back alignment and structure |
|---|
Score = 467 bits (1204), Expect = e-164
Identities = 107/350 (30%), Positives = 174/350 (49%), Gaps = 15/350 (4%)
Query: 2 GCSVSKNQRDPILGKAYEDVML--HYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKK 59
G IL A +DV+ Y ++G+G F V C T + +A K +
Sbjct: 1 GSPGISGGGGGILDMADDDVLFEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVA 60
Query: 60 --PKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIA 117
+ ++RE I ++ P++VE TY + +++V E +G DL I+
Sbjct: 61 KFTSSPGLSTEDLKREASI-CHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVK 119
Query: 118 KGYN----SERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFG- 172
+ SE A+ +R I+ A+ CH ++HRD+KP S++++A +K+ FG
Sbjct: 120 RADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGV 179
Query: 173 SALLFEEGQVYRDIVGSGFYIAPEVLRRR-YGKEIDIWSAGVILYILLSGVPPFWAETKK 231
+ L E G V VG+ ++APEV++R YGK +D+W GVIL+ILLSG PF+ TK+
Sbjct: 180 AIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYG-TKE 238
Query: 232 GTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASD 291
++ I++G+ + W IS +AKDLVRRML DP RIT + L HPWL+E +
Sbjct: 239 RLFEGIIKGKYKMNPRQWSHISESAKDLVRRMLMLDPAERITVYEALNHPWLKERDRYAY 298
Query: 292 ---DTSVILRMKQFRRMNKLKKLTIKVIVEYLPDEETQALKEKFIEMDTD 338
+ ++++F KLK + + + + E+ + D
Sbjct: 299 KIHLPETVEQLRKFNARRKLKGAVLAAVSSHKFNSFYGDPPEELPDFSED 348
|
| >2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} Length = 349 | Back alignment and structure |
|---|
Score = 454 bits (1170), Expect = e-159
Identities = 117/320 (36%), Positives = 179/320 (55%), Gaps = 13/320 (4%)
Query: 4 SVSKNQRDPILGKAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMR 63
+ S I G + + + LGRG + Y C + T +PYA K + K
Sbjct: 34 TASLVPDYWIDGSNRDALSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKT---- 89
Query: 64 LAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSE 123
+ ++R EI + L LS PN+++ K +E T + +V+EL GG+LFDRI+ KGY SE
Sbjct: 90 -VDKKIVRTEIGVLLRLS-HPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSE 147
Query: 124 RDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVY 183
RDAA ++ I+ AV H G++HRDLKPEN + + +A LK+ DFG + + E +
Sbjct: 148 RDAADAVKQILEAVAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLM 207
Query: 184 RDIVGSGFYIAPEVLRRR-YGKEIDIWSAGVILYILLSGVPPFWAETK-KGTYDAILQGE 241
+ + G+ Y APE+LR YG E+D+WS G+I YILL G PF+ E + + IL E
Sbjct: 208 KTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCE 267
Query: 242 IDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASD---DTSVILR 298
F + W +S AKDLVR+++ DPK+R+T Q L+HPW+ +G+A++ + +
Sbjct: 268 YYFISPWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQHPWV--TGKAANFVHMDTAQKK 325
Query: 299 MKQFRRMNKLKKLTIKVIVE 318
+++F KLK V+
Sbjct: 326 LQEFNARRKLKAAVKAVVAS 345
|
| >2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} Length = 326 | Back alignment and structure |
|---|
Score = 450 bits (1159), Expect = e-158
Identities = 110/327 (33%), Positives = 165/327 (50%), Gaps = 13/327 (3%)
Query: 19 EDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKK---PKMRLAENDMIRREIQ 75
E+V +Y G LG GQF V C E ST YA K I K+ R + I RE+
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 76 IRLYLSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVN 135
I + PNV+ YE++T V +++EL GG+LFD + K +E +A L+ I+N
Sbjct: 67 ILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILN 125
Query: 136 AVNVCHSMGVMHRDLKPENFSFISRD-DNALLKVTDFGSALLFEEGQVYRDIVGSGFYIA 194
V HS+ + H DLKPEN + R+ +K+ DFG A + G +++I G+ ++A
Sbjct: 126 GVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVA 185
Query: 195 PEVLRRR-YGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSIS 253
PE++ G E D+WS GVI YILLSG PF +TK+ T + +F+ + + + S
Sbjct: 186 PEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTS 245
Query: 254 STAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASDDTSVILRMKQFRRMNKLKKLTI 313
+ AKD +RR+L KDPK+R+T L+HPW++ + R M K KK
Sbjct: 246 ALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQ----QALSRKASAVNMEKFKKFAA 301
Query: 314 KVIVEYLPDEETQALKEKFIEMDTDKN 340
+ L + F + +
Sbjct: 302 RKKSNNG---SGGGLNDIFEAQKIEWH 325
|
| >3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277 | Back alignment and structure |
|---|
Score = 440 bits (1134), Expect = e-155
Identities = 109/277 (39%), Positives = 163/277 (58%), Gaps = 4/277 (1%)
Query: 15 GKAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREI 74
G D+ +Y +GRG +G + + T A K I K + + D ++EI
Sbjct: 1 GSTKGDINQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKY---FVEDVDRFKQEI 57
Query: 75 QIRLYLSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIV 134
+I L PN++ T+ED T +++VMELC GG+LF+R++ K E DAA +++ ++
Sbjct: 58 EIMKSLD-HPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVL 116
Query: 135 NAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIA 194
+AV CH + V HRDLKPENF F++ ++ LK+ DFG A F+ G++ R VG+ +Y++
Sbjct: 117 SAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVS 176
Query: 195 PEVLRRRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISS 254
P+VL YG E D WSAGV++Y+LL G PPF A T I +G F W ++S
Sbjct: 177 PQVLEGLYGPECDEWSAGVMMYVLLCGYPPFSAPTDSEVMLKIREGTFTFPEKDWLNVSP 236
Query: 255 TAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASD 291
A+ L+RR+LTK PK+RIT+ Q LEH W + +S
Sbjct: 237 QAESLIRRLLTKSPKQRITSLQALEHEWFEKQLSSSP 273
|
| >3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* Length = 327 | Back alignment and structure |
|---|
Score = 440 bits (1135), Expect = e-154
Identities = 83/312 (26%), Positives = 146/312 (46%), Gaps = 9/312 (2%)
Query: 7 KNQRDPILGKAYEDVMLHY-FFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLA 65
+ + ++ E+ Y + LGRG+F V C ST + YA K + K+ +
Sbjct: 12 DLGTENLYFQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKR-RRGQD 70
Query: 66 ENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYN--SE 123
I EI + P V+ YE+ + + +++E GG++F + + SE
Sbjct: 71 CRAEILHEIAVLELAKSCPRVINLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSE 130
Query: 124 RDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVY 183
D +++ I+ V H ++H DLKP+N S +K+ DFG +
Sbjct: 131 NDVIRLIKQILEGVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACEL 190
Query: 184 RDIVGSGFYIAPEVLRRR-YGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEI 242
R+I+G+ Y+APE+L D+W+ G+I Y+LL+ PF E + TY I Q +
Sbjct: 191 REIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNV 250
Query: 243 DFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEAS----DDTSVILR 298
D+ + + S+S A D ++ +L K+P++R TA L H WL++ + ++TS +
Sbjct: 251 DYSEETFSSVSQLATDFIQSLLVKNPEKRPTAEICLSHSWLQQWDFENLFHPEETSSSSQ 310
Query: 299 MKQFRRMNKLKK 310
+ + K
Sbjct: 311 TQDHSVRSSEDK 322
|
| >1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 Length = 321 | Back alignment and structure |
|---|
Score = 440 bits (1134), Expect = e-154
Identities = 92/314 (29%), Positives = 163/314 (51%), Gaps = 9/314 (2%)
Query: 19 EDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRL 78
+++ Y LGRG+FG+ + C E S+ + Y K + K + ++++EI I L
Sbjct: 1 KELYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGT----DQVLVKKEISI-L 55
Query: 79 YLSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYN-SERDAATVLRAIVNAV 137
++ N++ ++E + ++ E G D+F+RI + +ER+ + + + A+
Sbjct: 56 NIARHRNILHLHESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEAL 115
Query: 138 NVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEV 197
HS + H D++PEN + +R + + K+ +FG A + G +R + + Y APEV
Sbjct: 116 QFLHSHNIGHFDIRPENIIYQTRRSSTI-KIIEFGQARQLKPGDNFRLLFTAPEYYAPEV 174
Query: 198 LRRR-YGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTA 256
+ D+WS G ++Y+LLSG+ PF AET + + I+ E FD + + IS A
Sbjct: 175 HQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISIEA 234
Query: 257 KDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASDDTSVILRMKQFRRMNKLKKLTIKVI 316
D V R+L K+ K R+TA++ L+HPWL++ E T VI +K R + L K + ++
Sbjct: 235 MDFVDRLLVKERKSRMTASEALQHPWLKQKIERV-STKVIRTLKHRRYYHTLIKKDLNMV 293
Query: 317 VEYLPDEETQALKE 330
V A++
Sbjct: 294 VSAARISCGGAIRS 307
|
| >2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287 | Back alignment and structure |
|---|
Score = 438 bits (1128), Expect = e-154
Identities = 105/262 (40%), Positives = 156/262 (59%), Gaps = 2/262 (0%)
Query: 24 HYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQ 83
Y MLG+G FG C + T + YA K I K + + I RE+++ L
Sbjct: 23 RYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKA-SAKNKDTSTILREVELLKKLD-H 80
Query: 84 PNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSM 143
PN+++ ED ++ ++V EL GG+LFD II + SE DAA +++ + + + H
Sbjct: 81 PNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKH 140
Query: 144 GVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLRRRYG 203
++HRDLKPEN S++ + +K+ DFG + F++ +D +G+ +YIAPEVLR Y
Sbjct: 141 NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGTYD 200
Query: 204 KEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRM 263
++ D+WSAGVILYILLSG PPF+ + + + G+ FD W +IS AKDL+R+M
Sbjct: 201 EKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRKM 260
Query: 264 LTKDPKRRITAAQVLEHPWLRE 285
LT P RITA Q LEHPW+++
Sbjct: 261 LTFHPSLRITATQCLEHPWIQK 282
|
| >1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C Length = 400 | Back alignment and structure |
|---|
Score = 442 bits (1138), Expect = e-154
Identities = 96/335 (28%), Positives = 162/335 (48%), Gaps = 22/335 (6%)
Query: 6 SKNQRDPILGKAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLA 65
+ + + K + + ++LG G G T +A K + PK
Sbjct: 45 QFHVKSGLQIKKNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPK---- 100
Query: 66 ENDMIRREIQIRLYLSGQPNVVEFKSTYED----ETAVHVVMELCEGGDLFDRIIAKGYN 121
RRE+++ S P++V YE+ + +VME +GG+LF RI +G
Sbjct: 101 ----ARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQ 156
Query: 122 --SERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEE 179
+ER+A+ ++++I A+ HS+ + HRD+KPEN + S+ NA+LK+TDFG A
Sbjct: 157 AFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTS 216
Query: 180 GQVYRDIVGSGFYIAPEVLRRR-YGKEIDIWSAGVILYILLSGVPPFWAETKKGT----Y 234
+ +Y+APEVL Y K D+WS GVI+YILL G PPF++
Sbjct: 217 HNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMK 276
Query: 235 DAILQGEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASD--- 291
I G+ +F W +S K L+R +L +P +R+T + + HPW+ +S +
Sbjct: 277 TRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPL 336
Query: 292 DTSVILRMKQFRRMNKLKKLTIKVIVEYLPDEETQ 326
TS +L+ + R + +++T + + E+ +
Sbjct: 337 HTSRVLKEDKERWEDVKEEMTSALATMRVDYEQIK 371
|
| >3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* Length = 284 | Back alignment and structure |
|---|
Score = 434 bits (1118), Expect = e-152
Identities = 98/275 (35%), Positives = 154/275 (56%), Gaps = 3/275 (1%)
Query: 19 EDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRL 78
+Y LG+G F V C +T +A K I K K+ + + RE +I
Sbjct: 2 TKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTK-KLSARDFQKLEREARICR 60
Query: 79 YLSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVN 138
L PN+V + ++E+ ++V +L GG+LF+ I+A+ + SE DA+ ++ I+ ++
Sbjct: 61 KLQ-HPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIA 119
Query: 139 VCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVL 198
CHS G++HR+LKPEN S+ A +K+ DFG A+ + + + G+ Y++PEVL
Sbjct: 120 YCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVL 179
Query: 199 RRR-YGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAK 257
++ Y K +DIW+ GVILYILL G PPFW E + Y I G D+ + W +++ AK
Sbjct: 180 KKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAK 239
Query: 258 DLVRRMLTKDPKRRITAAQVLEHPWLRESGEASDD 292
L+ MLT +PK+RITA Q L+ PW+ +
Sbjct: 240 SLIDSMLTVNPKKRITADQALKVPWICNRERVASA 274
|
| >3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A Length = 325 | Back alignment and structure |
|---|
Score = 429 bits (1104), Expect = e-150
Identities = 98/313 (31%), Positives = 160/313 (51%), Gaps = 28/313 (8%)
Query: 25 YFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQP 84
+ LG G F + C +N+ +A K I+K+ + ++EI G P
Sbjct: 13 DLKDKPLGEGSFSICRKCVHKKSNQAFAVKIISKRME------ANTQKEITALKLCEGHP 66
Query: 85 NVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMG 144
N+V+ + D+ +VMEL GG+LF+RI K + SE +A+ ++R +V+AV+ H +G
Sbjct: 67 NIVKLHEVFHDQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVSAVSHMHDVG 126
Query: 145 VMHRDLKPENFSFISRDDNALLKVTDFG-SALLFEEGQVYRDIVGSGFYIAPEVLRRR-Y 202
V+HRDLKPEN F +DN +K+ DFG + L + Q + + Y APE+L + Y
Sbjct: 127 VVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCFTLHYAAPELLNQNGY 186
Query: 203 GKEIDIWSAGVILYILLSGVPPFWAETKKGT-------YDAILQGEIDFDTDPWPSISST 255
+ D+WS GVILY +LSG PF + + T I +G+ F+ + W ++S
Sbjct: 187 DESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEGEAWKNVSQE 246
Query: 256 AKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASD------------DTSVILRMK-QF 302
AKDL++ +LT DP +R+ + + + WL++ + S +V +K F
Sbjct: 247 AKDLIQGLLTVDPNKRLKMSGLRYNEWLQDGSQLSSNPLMTPDILGSSGAAVHTCVKATF 306
Query: 303 RRMNKLKKLTIKV 315
NK K+ +
Sbjct: 307 HAFNKYKREGFCL 319
|
| >2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* Length = 361 | Back alignment and structure |
|---|
Score = 430 bits (1107), Expect = e-150
Identities = 103/346 (29%), Positives = 163/346 (47%), Gaps = 13/346 (3%)
Query: 19 EDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKK---PKMRLAENDMIRREIQ 75
+ V Y G LG GQF + C E ST YA K I K+ R + I RE+
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVS 67
Query: 76 IRLYLSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVN 135
I + PN++ YE+ T V +++EL GG+LFD + K SE +A + ++ I++
Sbjct: 68 ILRQVL-HPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILD 126
Query: 136 AVNVCHSMGVMHRDLKPENFSFISRD-DNALLKVTDFGSALLFEEGQVYRDIVGSGFYIA 194
VN H+ + H DLKPEN + ++ +K+ DFG A E+G +++I G+ ++A
Sbjct: 127 GVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVA 186
Query: 195 PEVLRRR-YGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSIS 253
PE++ G E D+WS GVI YILLSG PF +TK+ T I DFD + + S
Sbjct: 187 PEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQTS 246
Query: 254 STAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASD-----DTSVILRMKQFRRMNKL 308
AKD +R++L K+ ++R+T + L HPW+ + K+ +
Sbjct: 247 ELAKDFIRKLLVKETRKRLTIQEALRHPWITPVDTQQAMVRRESVVNLENFKKQYVRRRW 306
Query: 309 KK--LTIKVIVEYLPDEETQALKEKFIEMDTDKNGTLSYDELRAGL 352
K + + + ++ ++ T R L
Sbjct: 307 KLSFSIVSLCNHLTRSLMKKVHLRTSEDLRNCESDTEENIARRKAL 352
|
| >2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365 | Back alignment and structure |
|---|
Score = 425 bits (1094), Expect = e-147
Identities = 93/278 (33%), Positives = 153/278 (55%), Gaps = 17/278 (6%)
Query: 19 EDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAEND------MIRR 72
++ Y ++GRG V C +T +A K + RL+ RR
Sbjct: 90 KEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVT-AERLSPEQLEEVREATRR 148
Query: 73 EIQIRLYLSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRA 132
E I ++G P+++ +YE + + +V +L G+LFD + K SE++ +++R+
Sbjct: 149 ETHILRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRS 208
Query: 133 IVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFY 192
++ AV+ H+ ++HRDLKPEN DDN ++++DFG + E G+ R++ G+ Y
Sbjct: 209 LLEAVSFLHANNIVHRDLKPENILL---DDNMQIRLSDFGFSCHLEPGEKLRELCGTPGY 265
Query: 193 IAPEVLR-------RRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFD 245
+APE+L+ YGKE+D+W+ GVIL+ LL+G PPFW + I++G+ F
Sbjct: 266 LAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIMEGQYQFS 325
Query: 246 TDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWL 283
+ W SST KDL+ R+L DP+ R+TA Q L+HP+
Sbjct: 326 SPEWDDRSSTVKDLISRLLQVDPEARLTAEQALQHPFF 363
|
| >1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298 | Back alignment and structure |
|---|
Score = 422 bits (1087), Expect = e-147
Identities = 97/297 (32%), Positives = 149/297 (50%), Gaps = 18/297 (6%)
Query: 10 RDPIL--GKAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAEN 67
RD L + +Y +LGRG V C T + YA K I +
Sbjct: 2 RDAALPGSHSTHGFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAE 61
Query: 68 D------MIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYN 121
+ +E+ I +SG PN+++ K TYE T +V +L + G+LFD + K
Sbjct: 62 EVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTL 121
Query: 122 SERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQ 181
SE++ ++RA++ + H + ++HRDLKPEN DD+ +K+TDFG + + G+
Sbjct: 122 SEKETRKIMRALLEVICALHKLNIVHRDLKPENILL---DDDMNIKLTDFGFSCQLDPGE 178
Query: 182 VYRDIVGSGFYIAPEVLR-------RRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTY 234
R++ G+ Y+APE++ YGKE+D+WS GVI+Y LL+G PPFW +
Sbjct: 179 KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLML 238
Query: 235 DAILQGEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASD 291
I+ G F + W S T KDLV R L P++R TA + L HP+ ++
Sbjct: 239 RMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQYVVEEV 295
|
| >2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A Length = 321 | Back alignment and structure |
|---|
Score = 422 bits (1088), Expect = e-147
Identities = 99/309 (32%), Positives = 156/309 (50%), Gaps = 12/309 (3%)
Query: 19 EDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKP---KMRLAENDMIRREIQ 75
+ V Y G LG GQF + C E ST YA K I K+ R + I RE+
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVS 67
Query: 76 IRLYLSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVN 135
I + NV+ YE+ T V +++EL GG+LFD + K SE +A + ++ I++
Sbjct: 68 ILRQVLH-HNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILD 126
Query: 136 AVNVCHSMGVMHRDLKPENFSFISRD-DNALLKVTDFGSALLFEEGQVYRDIVGSGFYIA 194
VN H+ + H DLKPEN + ++ +K+ DFG A E+G +++I G+ ++A
Sbjct: 127 GVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVA 186
Query: 195 PEVLRRR-YGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSIS 253
PE++ G E D+WS GVI YILLSG PF +TK+ T I DFD + + S
Sbjct: 187 PEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHTS 246
Query: 254 STAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEAS-----DDTSVILRMKQFRRMNKL 308
AKD +R++L K+ ++R+T + L HPW+ + + ++ +
Sbjct: 247 ELAKDFIRKLLVKETRKRLTIQEALRHPWITPVDNQQAMVRRESVVNLENFRKQYVRRRW 306
Query: 309 KKLTIKVIV 317
K + ++
Sbjct: 307 KL-SFSIVS 314
|
| >2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A Length = 342 | Back alignment and structure |
|---|
Score = 422 bits (1088), Expect = e-147
Identities = 100/320 (31%), Positives = 154/320 (48%), Gaps = 22/320 (6%)
Query: 14 LGKAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRRE 73
L + Y +G G + V C +TN +A K I K + E
Sbjct: 13 LHRNSIQFTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRD-------PTEE 65
Query: 74 IQIRLYLSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAI 133
I+I L PN++ K Y+D V+VV EL +GG+L D+I+ + + SER+A+ VL I
Sbjct: 66 IEILLRYGQHPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSEREASAVLFTI 125
Query: 134 VNAVNVCHSMGVMHRDLKPENFSFISRDDNA-LLKVTDFG-SALLFEEGQVYRDIVGSGF 191
V H+ GV+HRDLKP N ++ N +++ DFG + L E + +
Sbjct: 126 TKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCYTAN 185
Query: 192 YIAPEVLRRR-YGKEIDIWSAGVILYILLSGVPPFWA---ETKKGTYDAILQGEIDFDTD 247
++APEVL R+ Y DIWS GV+LY +L+G PF +T + I G+
Sbjct: 186 FVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKFSLSGG 245
Query: 248 PWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASD---DTSVILRMKQ--- 301
W S+S TAKDLV +ML DP +R+TAA VL HPW+ + + + +
Sbjct: 246 YWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRHPWIVHWDQLPQYQLNRQDAPHLVKGAM 305
Query: 302 ---FRRMNKLKKLTIKVIVE 318
+ +N+ + ++ +
Sbjct: 306 AATYSALNRNQSPVLEPVGR 325
|
| >3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285 | Back alignment and structure |
|---|
Score = 420 bits (1081), Expect = e-147
Identities = 94/272 (34%), Positives = 153/272 (56%), Gaps = 8/272 (2%)
Query: 19 EDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRL 78
+ + F R LG G FG +L E S+ K+I K + ++ + I EI++
Sbjct: 18 GTIDDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKD-RSQVPM-EQIEAEIEVLK 75
Query: 79 YLSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAK----GYNSERDAATVLRAIV 134
L PN+++ +ED +++VME CEGG+L +RI++ SE A +++ ++
Sbjct: 76 SLD-HPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMM 134
Query: 135 NAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIA 194
NA+ HS V+H+DLKPEN F ++ +K+ DFG A LF+ + + G+ Y+A
Sbjct: 135 NALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTNAAGTALYMA 194
Query: 195 PEVLRRRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISS 254
PEV +R + DIWSAGV++Y LL+G PF + + E ++ + P ++
Sbjct: 195 PEVFKRDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEPNYAVECRP-LTP 253
Query: 255 TAKDLVRRMLTKDPKRRITAAQVLEHPWLRES 286
A DL+++MLTKDP+RR +AAQVL H W +++
Sbjct: 254 QAVDLLKQMLTKDPERRPSAAQVLHHEWFKQA 285
|
| >3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... Length = 283 | Back alignment and structure |
|---|
Score = 419 bits (1080), Expect = e-146
Identities = 105/281 (37%), Positives = 153/281 (54%), Gaps = 6/281 (2%)
Query: 20 DVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKK---PKMRLAENDMIRREIQI 76
V HY G LG GQF + C + T + YA K I K+ R + I RE+ I
Sbjct: 2 MVEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNI 61
Query: 77 RLYLSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNA 136
+ PN++ +E++T V +++EL GG+LFD + K +E +A L+ I++
Sbjct: 62 LREIR-HPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDG 120
Query: 137 VNVCHSMGVMHRDLKPENFSFISRD-DNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAP 195
V+ HS + H DLKPEN + ++ N +K+ DFG A E G +++I G+ ++AP
Sbjct: 121 VHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAP 180
Query: 196 EVLRRR-YGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISS 254
E++ G E D+WS GVI YILLSG PF ETK+ T I DFD + + + S
Sbjct: 181 EIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNTSE 240
Query: 255 TAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASDDTSV 295
AKD +RR+L KDPKRR+T AQ LEH W++ +
Sbjct: 241 LAKDFIRRLLVKDPKRRMTIAQSLEHSWIKAIRRRNVRGED 281
|
| >3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* Length = 299 | Back alignment and structure |
|---|
Score = 407 bits (1049), Expect = e-142
Identities = 91/316 (28%), Positives = 150/316 (47%), Gaps = 41/316 (12%)
Query: 10 RDPILGKAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDM 69
+ + K + + ++LG G G T +A K + PK
Sbjct: 5 KSGLQIKKNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPK-------- 56
Query: 70 IRREIQIRLYLSGQPNVVEFKSTYEDETA----VHVVMELCEGGDLFDRIIAKGYN--SE 123
RRE+++ S P++V YE+ A + +VME +GG+LF RI +G +E
Sbjct: 57 ARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTE 116
Query: 124 RDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVY 183
R+A+ ++++I A+ HS+ + HRD+KPEN + S+ NA+LK+TDFG
Sbjct: 117 REASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFG----------- 165
Query: 184 RDIVGSGFYIAPEVLRRRYGKEIDIWSAGVILYILLSGVPPFWAETKKGT----YDAILQ 239
A E +Y K D+WS GVI+YILL G PPF++ I
Sbjct: 166 ---------FAKETTGEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRM 216
Query: 240 GEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASD---DTSVI 296
G+ +F W +S K L+R +L +P +R+T + + HPW+ +S + TS +
Sbjct: 217 GQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTSRV 276
Query: 297 LRMKQFRRMNKLKKLT 312
L+ + R + +++T
Sbjct: 277 LKEDKERWEDVKEEMT 292
|
| >2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* Length = 322 | Back alignment and structure |
|---|
Score = 407 bits (1047), Expect = e-141
Identities = 97/319 (30%), Positives = 154/319 (48%), Gaps = 15/319 (4%)
Query: 19 EDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKK-----PKMRLAENDMIRRE 73
+ + Y + LG G G L E T + A K I+K+ + E
Sbjct: 6 KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETE 65
Query: 74 IQIRLYLSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAI 133
I+I L P +++ K+ ++ E ++V+EL EGG+LFD+++ E +
Sbjct: 66 IEI-LKKLNHPCIIKIKNFFDAE-DYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQM 123
Query: 134 VNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYI 193
+ AV H G++HRDLKPEN S++++ L+K+TDFG + + E + R + G+ Y+
Sbjct: 124 LLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYL 183
Query: 194 APEVL----RRRYGKEIDIWSAGVILYILLSGVPPFWAE-TKKGTYDAILQGEIDFDTDP 248
APEVL Y + +D WS GVIL+I LSG PPF T+ D I G+ +F +
Sbjct: 184 APEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEV 243
Query: 249 WPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASDDTSVILRMKQFRRMNKL 308
W +S A DLV+++L DPK R T + L HPWL++ + + L
Sbjct: 244 WAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDE---DMKRKFQDLLSEENESTAL 300
Query: 309 KKLTIKVIVEYLPDEETQA 327
++ + E +A
Sbjct: 301 PQVLAQPSTSRKRPREGEA 319
|
| >3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* Length = 336 | Back alignment and structure |
|---|
Score = 407 bits (1048), Expect = e-141
Identities = 99/313 (31%), Positives = 156/313 (49%), Gaps = 25/313 (7%)
Query: 19 EDVMLHYFFGR-MLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIR 77
V Y + +LG G G C T + A K + PK R+E+
Sbjct: 24 YAVTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSPK--------ARQEVDHH 75
Query: 78 LYLSGQPNVVEFKSTYED----ETAVHVVMELCEGGDLFDRIIAKGYN--SERDAATVLR 131
SG P++V YE+ + + ++ME EGG+LF RI +G +ER+AA ++R
Sbjct: 76 WQASGGPHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMR 135
Query: 132 AIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGF 191
I A+ HS + HRD+KPEN + S++ +A+LK+TDFG A + + + +
Sbjct: 136 DIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQ-TPCYTPY 194
Query: 192 YIAPEVLRRR-YGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQ----GEIDFDT 246
Y+APEVL Y K D+WS GVI+YILL G PPF++ T + + + G+ F
Sbjct: 195 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPN 254
Query: 247 DPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASD---DTSVILRMKQFR 303
W +S AK L+R +L DP R+T Q + HPW+ +S T+ +L+ +
Sbjct: 255 PEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNHPWINQSMVVPQTPLHTARVLQ-EDKD 313
Query: 304 RMNKLKKLTIKVI 316
+++K+ +
Sbjct: 314 HWDEVKEEMTSAL 326
|
| >3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573 | Back alignment and structure |
|---|
Score = 414 bits (1065), Expect = e-140
Identities = 102/407 (25%), Positives = 168/407 (41%), Gaps = 23/407 (5%)
Query: 19 EDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRL 78
+ V+ HY LG G FGV + TE +T +A K + ++ + +R+EIQ
Sbjct: 153 DHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTP---HESDKETVRKEIQTMS 209
Query: 79 YLSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAK-GYNSERDAATVLRAIVNAV 137
L P +V +ED+ + ++ E GG+LF+++ + SE +A +R + +
Sbjct: 210 VLR-HPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGL 268
Query: 138 NVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEV 197
H +H DLKPEN F ++ N L K+ DFG + Q + G+ + APEV
Sbjct: 269 CHMHENNYVHLDLKPENIMFTTKRSNEL-KLIDFGLTAHLDPKQSVKVTTGTAEFAAPEV 327
Query: 198 LRRR-YGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTA 256
+ G D+WS GV+ YILLSG+ PF E T + + + D + IS
Sbjct: 328 AEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDG 387
Query: 257 KDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASDDTSV-ILRMKQFRRMNKLKKLTIKV 315
KD +R++L DP R+T Q LEHPWL D+ + R + R K K
Sbjct: 388 KDFIRKLLLADPNTRMTIHQALEHPWLTPGNAPGRDSQIPSSRYTKIRDSIKTKY--DAW 445
Query: 316 IVEYLPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNSS 375
P + + ++ + + +V S+
Sbjct: 446 PEPLPPLGRISNYSSLRKHRPQEYSIRDAFWDRSEAQPRFIVKPYGTEVG-----EGQSA 500
Query: 376 TLESLCENLPT------KEKQKLME--KFREMDTDNSDTLTLSELKA 414
K+ ++L + K+ + N LT++ +K
Sbjct: 501 NFYCRVIASSPPVVTWHKDDRELKQSVKYMKRYNGNDYGLTINRVKG 547
|
| >2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A Length = 316 | Back alignment and structure |
|---|
Score = 404 bits (1041), Expect = e-140
Identities = 94/308 (30%), Positives = 150/308 (48%), Gaps = 38/308 (12%)
Query: 24 HYFFGR-MLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSG 82
Y +LG G C T++ YA K I K+P + RE+++ G
Sbjct: 13 VYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQP---GHIRSRVFREVEMLYQCQG 69
Query: 83 QPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHS 142
NV+E +E+E ++V E GG + I + + +E +A+ V++ + +A++ H+
Sbjct: 70 HRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHN 129
Query: 143 MGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDI--------VGSGFYIA 194
G+ HRDLKPEN + + +K+ DF + I GS Y+A
Sbjct: 130 KGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMA 189
Query: 195 PEVLR------RRYGKEIDIWSAGVILYILLSGVPPFWAE---------------TKKGT 233
PEV+ Y K D+WS GVILYILLSG PPF +
Sbjct: 190 PEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNML 249
Query: 234 YDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASD-- 291
+++I +G+ +F W IS AKDL+ ++L +D K+R++AAQVL+HPW++ G A +
Sbjct: 250 FESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQ--GCAPENT 307
Query: 292 -DTSVILR 298
T ++L+
Sbjct: 308 LPTPMVLQ 315
|
| >1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387 | Back alignment and structure |
|---|
Score = 406 bits (1045), Expect = e-140
Identities = 89/332 (26%), Positives = 150/332 (45%), Gaps = 31/332 (9%)
Query: 19 EDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRL 78
V +Y LG G FGV + C E +T R + K I + ++ EI I
Sbjct: 47 GSVYDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTP---YPLDKYTVKNEISIMN 103
Query: 79 YLSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYN-SERDAATVLRAIVNAV 137
L P ++ +ED+ + +++E GG+LFDRI A+ Y SE + +R +
Sbjct: 104 QLH-HPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGL 162
Query: 138 NVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEV 197
H ++H D+KPEN ++ +++ K+ DFG A ++ + + + APE+
Sbjct: 163 KHMHEHSIVHLDIKPENIMCETKKASSV-KIIDFGLATKLNPDEIVKVTTATAEFAAPEI 221
Query: 198 LRRR-YGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTA 256
+ R G D+W+ GV+ Y+LLSG+ PF E T + + + +FD D + S+S A
Sbjct: 222 VDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEA 281
Query: 257 KDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASDDT----------------------- 293
KD ++ +L K+P++R+T LEHPWL+
Sbjct: 282 KDFIKNLLQKEPRKRLTVHDALEHPWLKGDHSNLTSRIPSSRYNKIRQKIKEKYADWPAP 341
Query: 294 -SVILRMKQFRRMNKLKKLTIKVIVEYLPDEE 324
I R+ F + K + ++ Y +E
Sbjct: 342 QPAIGRIANFSSLRKHRPQEYQIYDSYFDRKE 373
|
| >2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373 | Back alignment and structure |
|---|
Score = 400 bits (1030), Expect = e-138
Identities = 89/302 (29%), Positives = 153/302 (50%), Gaps = 9/302 (2%)
Query: 13 ILGKAYEDVMLHYFFGRM--LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMI 70
I+ V Y + LG G+FG + C E +T A K I + + + + +
Sbjct: 77 IVTAKQGAVNSFYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTR---GMKDKEEV 133
Query: 71 RREIQIRLYLSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYN-SERDAATV 129
+ EI + L N+++ +E + + +VME +GG+LFDRII + YN +E D
Sbjct: 134 KNEISVMNQLD-HANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILF 192
Query: 130 LRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGS 189
++ I + H M ++H DLKPEN ++RD + K+ DFG A ++ + + G+
Sbjct: 193 MKQICEGIRHMHQMYILHLDLKPENILCVNRDAKQI-KIIDFGLARRYKPREKLKVNFGT 251
Query: 190 GFYIAPEVLRRR-YGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDP 248
++APEV+ D+WS GVI Y+LLSG+ PF + T + IL D + +
Sbjct: 252 PEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDLEDEE 311
Query: 249 WPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASDDTSVILRMKQFRRMNKL 308
+ IS AK+ + ++L K+ RI+A++ L+HPWL + S ++ + + + +
Sbjct: 312 FQDISEEAKEFISKLLIKEKSWRISASEALKHPWLSDHKLHSRLSAQKKKNRGSDAQDFV 371
Query: 309 KK 310
K
Sbjct: 372 TK 373
|
| >3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Length = 419 | Back alignment and structure |
|---|
Score = 384 bits (987), Expect = e-130
Identities = 93/288 (32%), Positives = 148/288 (51%), Gaps = 12/288 (4%)
Query: 19 EDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKP-----KMRLAENDMIRRE 73
+ + Y + LG G G L E T + A + I+K+ + E
Sbjct: 131 KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETE 190
Query: 74 IQIRLYLSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAI 133
I+I L+ P +++ K+ ++ E ++V+EL EGG+LFD+++ E +
Sbjct: 191 IEILKKLN-HPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQM 248
Query: 134 VNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYI 193
+ AV H G++HRDLKPEN S++++ L+K+TDFG + + E + R + G+ Y+
Sbjct: 249 LLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYL 308
Query: 194 APEVL----RRRYGKEIDIWSAGVILYILLSGVPPFWAE-TKKGTYDAILQGEIDFDTDP 248
APEVL Y + +D WS GVIL+I LSG PPF T+ D I G+ +F +
Sbjct: 309 APEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEV 368
Query: 249 WPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASDDTSVI 296
W +S A DLV+++L DPK R T + L HPWL++ ++
Sbjct: 369 WAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDEDMKRKFQDLL 416
|
| >3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345 | Back alignment and structure |
|---|
Score = 379 bits (976), Expect = e-130
Identities = 89/339 (26%), Positives = 149/339 (43%), Gaps = 52/339 (15%)
Query: 6 SKNQRDPILGKAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLA 65
S + G + ++ Y +G+G +GV + EN T A K + K ++
Sbjct: 9 SGRENLYFQGGSLLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQIN 68
Query: 66 END--MIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYN-- 121
D I+ E+++ L PN+ YEDE + +VMELC GG L D++ +
Sbjct: 69 PKDVERIKTEVRLMKKLH-HPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDST 127
Query: 122 --------------------------------------SERDAATVLRAIVNAVNVCHSM 143
E+ + ++R I +A++ H+
Sbjct: 128 GKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQ 187
Query: 144 GVMHRDLKPENFSFISRDDNALLKVTDFGSALLFE-----EGQVYRDIVGSGFYIAPEVL 198
G+ HRD+KPENF F S + + +K+ DFG + F E G+ +++APEVL
Sbjct: 188 GICHRDIKPENFLF-STNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVL 246
Query: 199 R---RRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISST 255
YG + D WSAGV+L++LL G PF T +L ++ F+ + +S
Sbjct: 247 NTTNESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDADTISQVLNKKLCFENPNYNVLSPL 306
Query: 256 AKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASDDTS 294
A+DL+ +L ++ R A + L+HPW+ + + S
Sbjct: 307 ARDLLSNLLNRNVDERFDAMRALQHPWISQFSDKIYKMS 345
|
| >3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432 | Back alignment and structure |
|---|
Score = 301 bits (773), Expect = 2e-98
Identities = 84/364 (23%), Positives = 147/364 (40%), Gaps = 26/364 (7%)
Query: 1 MGCSVSKNQRDPILGKAYEDV-MLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKK 59
MG S S Q D + V + + +LG G G + + NR A K I +
Sbjct: 1 MGSSPSLEQDDGDEETSVVIVGKISFCPKDVLGHGAEG-TIVYRGMFDNRDVAVKRILPE 59
Query: 60 PKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKG 119
RE+Q+ PNV+ + T +D ++ +ELC L + + K
Sbjct: 60 ------CFSFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELC-AATLQEYVEQKD 112
Query: 120 YN-SERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKV--TDFGSALL 176
+ + T+L+ + + HS+ ++HRDLKP N + + +K +DFG
Sbjct: 113 FAHLGLEPITLLQQTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKK 172
Query: 177 FEEGQVY----RDIVGSGFYIAPEVLR----RRYGKEIDIWSAGVILYILLS-GVPPFWA 227
G+ + G+ +IAPE+L +DI+SAG + Y ++S G PF
Sbjct: 173 LAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGK 232
Query: 228 ETKKGTYDAILQGEIDFDT-DPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRES 286
++ IL G D P A++L+ +M+ DP++R +A VL+HP+
Sbjct: 233 SLQRQAN--ILLGACSLDCLHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLKHPFFWSL 290
Query: 287 GEA-SDDTSVILRMKQFRRMNKLKKLTIKVIVEYLPDEETQALKEKFIEMDTDKNGTLSY 345
+ V R+++ + K + + + + + D K T
Sbjct: 291 EKQLQFFQDVSDRIEKESLDGPIVKQLERGGRAVVKMDWRENITVPLQT-DLRKFRTYKG 349
Query: 346 DELR 349
+R
Sbjct: 350 GSVR 353
|
| >2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434 | Back alignment and structure |
|---|
Score = 288 bits (738), Expect = 4e-93
Identities = 81/339 (23%), Positives = 138/339 (40%), Gaps = 51/339 (15%)
Query: 19 EDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRL 78
+ + ++LG G G + RP A K + D+ EI++
Sbjct: 11 QSLKNLVVSEKILGYGSSGTVVFQ-GSFQGRPVAVKRMLID------FCDIALMEIKLLT 63
Query: 79 YLSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNS-------ERDAATVLR 131
PNV+ + + + +++ +ELC +L D + +K + E + ++LR
Sbjct: 64 ESDDHPNVIRYYCSETTDRFLYIALELC-NLNLQDLVESKNVSDENLKLQKEYNPISLLR 122
Query: 132 AIVNAVNVCHSMGVMHRDLKPENFSFISRD----------DNALLKVTDFGSALLFEEGQ 181
I + V HS+ ++HRDLKP+N + +N + ++DFG + GQ
Sbjct: 123 QIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQ 182
Query: 182 VY-----RDIVGSGFYIAPEVLR--------RRYGKEIDIWSAGVILYILLS-GVPPFWA 227
+ G+ + APE+L RR + IDI+S G + Y +LS G PF
Sbjct: 183 SSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGD 242
Query: 228 ETKKGTYDAILQGEIDFD---TDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLR 284
+ I++G D S+ + A DL+ +M+ DP +R TA +VL HP
Sbjct: 243 KYS--RESNIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPLFW 300
Query: 285 ESG-------EASDDTSVILRMKQFRRMNKLKKLTIKVI 316
+ SD + R + K + VI
Sbjct: 301 PKSKKLEFLLKVSDRLEIENRDPPSALLMKFDAGSDFVI 339
|
| >2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335 | Back alignment and structure |
|---|
Score = 262 bits (672), Expect = 2e-84
Identities = 86/267 (32%), Positives = 128/267 (47%), Gaps = 16/267 (5%)
Query: 24 HYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDM---IRREIQIRLYL 80
Y GR LG+G F + ++ T +A K + K L + + EI I L
Sbjct: 42 RYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKS---LLLKPHQREKMSMEISIHRSL 98
Query: 81 SGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVC 140
+ +VV F +ED V VV+ELC L + + +E +A LR IV
Sbjct: 99 A-HQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYL 157
Query: 141 HSMGVMHRDLKPENFSFISRDDNALLKVTDFG-SALLFEEGQVYRDIVGSGFYIAPEVLR 199
H V+HRDLK N F++ D +K+ DFG + + +G+ + + G+ YIAPEVL
Sbjct: 158 HRNRVIHRDLKLGNL-FLNEDLE--VKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLS 214
Query: 200 RR-YGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKD 258
++ + E+D+WS G I+Y LL G PPF K TY I + E P I+ A
Sbjct: 215 KKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSI---P-KHINPVAAS 270
Query: 259 LVRRMLTKDPKRRITAAQVLEHPWLRE 285
L+++ML DP R T ++L +
Sbjct: 271 LIQKMLQTDPTARPTINELLNDEFFTS 297
|
| >2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294 | Back alignment and structure |
|---|
Score = 260 bits (667), Expect = 3e-84
Identities = 86/267 (32%), Positives = 128/267 (47%), Gaps = 16/267 (5%)
Query: 24 HYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDM---IRREIQIRLYL 80
Y GR LG+G F + ++ T +A K + K L + + EI I L
Sbjct: 16 RYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKS---LLLKPHQREKMSMEISIHRSL 72
Query: 81 SGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVC 140
+ +VV F +ED V VV+ELC L + + +E +A LR IV
Sbjct: 73 A-HQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYL 131
Query: 141 HSMGVMHRDLKPENFSFISRDDNALLKVTDFG-SALLFEEGQVYRDIVGSGFYIAPEVLR 199
H V+HRDLK N F++ D +K+ DFG + + +G+ + + G+ YIAPEVL
Sbjct: 132 HRNRVIHRDLKLGNL-FLNEDLE--VKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLS 188
Query: 200 RR-YGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKD 258
++ + E+D+WS G I+Y LL G PPF K TY I + E P I+ A
Sbjct: 189 KKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSI---P-KHINPVAAS 244
Query: 259 LVRRMLTKDPKRRITAAQVLEHPWLRE 285
L+++ML DP R T ++L +
Sbjct: 245 LIQKMLQTDPTARPTINELLNDEFFTS 271
|
| >4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319 | Back alignment and structure |
|---|
Score = 259 bits (664), Expect = 1e-83
Identities = 67/299 (22%), Positives = 115/299 (38%), Gaps = 43/299 (14%)
Query: 25 YFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQP 84
+ +LG+G + T +A K +R D+ RE ++ L+
Sbjct: 11 WLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLR--PVDVQMREFEVLKKLN-HK 67
Query: 85 NVVEFKSTYEDETAVHV--VMELCEGGDLFDRIIAKGYN---SERDAATVLRAIVNAVNV 139
N+V+ + E+ T H +ME C G L+ + E + VLR +V +N
Sbjct: 68 NIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNH 127
Query: 140 CHSMGVMHRDLKPENF-SFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVL 198
G++HR++KP N I D ++ K+TDFG+A E+ + + + G+ Y+ P++
Sbjct: 128 LRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLYGTEEYLHPDMY 187
Query: 199 RRR---------YGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQ---------- 239
R YG +D+WS GV Y +G PF ++
Sbjct: 188 ERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGA 247
Query: 240 ---------GEIDFDTD--PWPSISSTAKDLV----RRMLTKDPKRRITAAQVLEHPWL 283
G ID+ D S+S + L+ +L D ++ Q
Sbjct: 248 ISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSD 306
|
| >3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278 | Back alignment and structure |
|---|
Score = 254 bits (652), Expect = 3e-82
Identities = 79/268 (29%), Positives = 140/268 (52%), Gaps = 17/268 (6%)
Query: 24 HYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDM---IRREIQIRLYL 80
+ G +LG+G F Y T A K I KK + + M ++ E++I L
Sbjct: 12 DFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKK---AMYKAGMVQRVQNEVKIHCQL 68
Query: 81 SGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYN-SERDAATVLRAIVNAVNV 139
P+++E + +ED V++V+E+C G++ + + SE +A + I+ +
Sbjct: 69 K-HPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLY 127
Query: 140 CHSMGVMHRDLKPENFSFISRDDNALLKVTDFG-SALLFEEGQVYRDIVGSGFYIAPEVL 198
HS G++HRDL N ++R+ N +K+ DFG + L + + + G+ YI+PE+
Sbjct: 128 LHSHGILHRDLTLSNL-LLTRNMN--IKIADFGLATQLKMPHEKHYTLCGTPNYISPEIA 184
Query: 199 RRR-YGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAK 257
R +G E D+WS G + Y LL G PPF +T K T + ++ + + P +S AK
Sbjct: 185 TRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLADYEM---P-SFLSIEAK 240
Query: 258 DLVRRMLTKDPKRRITAAQVLEHPWLRE 285
DL+ ++L ++P R++ + VL+HP++
Sbjct: 241 DLIHQLLRRNPADRLSLSSVLDHPFMSR 268
|
| >1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303 | Back alignment and structure |
|---|
Score = 254 bits (650), Expect = 1e-81
Identities = 72/306 (23%), Positives = 121/306 (39%), Gaps = 41/306 (13%)
Query: 25 YFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQP 84
+ +LG+G FG +R YA K I + I E+ + L+
Sbjct: 8 FEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKL----STILSEVMLLASLN-HQ 62
Query: 85 NVVEFKSTYEDETAVHV-------------VMELCEGGDLFDRIIAKGYNSERD-AATVL 130
VV + + + + ME CE G L+D I ++ N +RD +
Sbjct: 63 YVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLF 122
Query: 131 RAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDI---- 186
R I+ A++ HS G++HRDLKP N FI N +K+ DFG A +
Sbjct: 123 RQILEALSYIHSQGIIHRDLKPMNI-FIDESRN--VKIGDFGLAKNVHRSLDILKLDSQN 179
Query: 187 -----------VGSGFYIAPEVLRRR--YGKEIDIWSAGVILYILLSGVPPFWAETKKGT 233
+G+ Y+A EVL Y ++ID++S G+I + ++ P +
Sbjct: 180 LPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY--PFSTGMERVNI 237
Query: 234 YDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASDDT 293
+ I+F D + K ++R ++ DP +R A +L WL +
Sbjct: 238 LKKLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSGWLPVKHQDEVIK 297
Query: 294 SVILRM 299
+ +
Sbjct: 298 EALKSL 303
|
| >4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396 | Back alignment and structure |
|---|
Score = 251 bits (642), Expect = 3e-79
Identities = 72/354 (20%), Positives = 127/354 (35%), Gaps = 58/354 (16%)
Query: 25 YFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQP 84
+ +LG+G + T +A K +R D+ RE ++ L+
Sbjct: 11 WLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLR--PVDVQMREFEVLKKLN-HK 67
Query: 85 NVVEFKSTYEDETAVHV--VMELCEGGDLFDRIIAKGYN---SERDAATVLRAIVNAVNV 139
N+V+ + E+ T H +ME C G L+ + E + VLR +V +N
Sbjct: 68 NIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNH 127
Query: 140 CHSMGVMHRDLKPENF-SFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVL 198
G++HR++KP N I D ++ K+TDFG+A E+ + + + G+ Y+ P++
Sbjct: 128 LRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLYGTEEYLHPDMY 187
Query: 199 RRR---------YGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQ---------- 239
R YG +D+WS GV Y +G PF ++
Sbjct: 188 ERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGA 247
Query: 240 ---------GEIDFDTD--PWPSISSTAKDLV----RRMLTKDPKRRITAAQVLEHPWLR 284
G ID+ D S+S + L+ +L D ++ Q
Sbjct: 248 ISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSD- 306
Query: 285 ESGEASDDTSVILRMKQFRRMNKLKKLTIKVIVEYLPDEETQALKEKFIEMDTD 338
IL ++ + Y+ T + + + T
Sbjct: 307 -----------ILHRM---VIHVFSLQQMTAHKIYIHSYNTATIFHELVYKQTK 346
|
| >3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371 | Back alignment and structure |
|---|
Score = 249 bits (637), Expect = 7e-79
Identities = 45/304 (14%), Positives = 86/304 (28%), Gaps = 44/304 (14%)
Query: 24 HYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIR------ 77
L G V +L + +A K + +E + +
Sbjct: 63 KLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGE 122
Query: 78 -----------------LYLSGQPNVVEFKSTYEDETAVH--VVMELCEG-----GDLFD 113
+ + QP + +D + ++M D
Sbjct: 123 SPEEARDRRRLLLPSDAVAVQSQPPFAQLSPGQDDYAVANYLLLMPAASVDLELLFSTLD 182
Query: 114 RIIAKGYNSERDAATVL-RAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFG 172
+ + A +L ++ S G++H P+N FI D L + D
Sbjct: 183 FVYVFRGDEGILALHILTAQLIRLAANLQSKGLVHGHFTPDNL-FIMPDGR--LMLGDVS 239
Query: 173 SALLFEEGQVYRDIVGSGFYIAPEVLRRR---YGKEIDIWSAGVILYILLSGVPPFWAET 229
+ ++ G Y E L + ++ W G+ +Y + PF T
Sbjct: 240 AL--WKVGTRGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGLVT 297
Query: 230 K--KGTYDAILQGEI---DFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLR 284
KG++ + K L+ R L D +RR+ + +E P
Sbjct: 298 PGIKGSWKRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAMETPEFL 357
Query: 285 ESGE 288
+
Sbjct: 358 QLQN 361
|
| >3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279 | Back alignment and structure |
|---|
Score = 245 bits (628), Expect = 1e-78
Identities = 85/263 (32%), Positives = 137/263 (52%), Gaps = 12/263 (4%)
Query: 25 YFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQP 84
+ GR LG+G+FG YL E + A K + K + +RRE++I+ +L P
Sbjct: 11 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HP 69
Query: 85 NVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMG 144
N++ + D T V++++E G ++ + E+ AT + + NA++ CHS
Sbjct: 70 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 129
Query: 145 VMHRDLKPENFSFISRDDNALLKVTDFG-SALLFEEGQVYRDIVGSGFYIAPEVLRRR-Y 202
V+HRD+KPEN + LK+ DFG S D+ G+ Y+ PE++ R +
Sbjct: 130 VIHRDIKPEN---LLLGSAGELKIADFGWSVHA--PSSRRTDLCGTLDYLPPEMIEGRMH 184
Query: 203 GKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRR 262
+++D+WS GV+ Y L G PPF A T + TY I + E F P ++ A+DL+ R
Sbjct: 185 DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF---P-DFVTEGARDLISR 240
Query: 263 MLTKDPKRRITAAQVLEHPWLRE 285
+L +P +R +VLEHPW+
Sbjct: 241 LLKHNPSQRPMLREVLEHPWITA 263
|
| >2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284 | Back alignment and structure |
|---|
Score = 240 bits (616), Expect = 9e-77
Identities = 78/263 (29%), Positives = 137/263 (52%), Gaps = 12/263 (4%)
Query: 25 YFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQP 84
+ GR LG+G+FG YL E A K + K + +RREI+I P
Sbjct: 16 FDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEI-QSHLRHP 74
Query: 85 NVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMG 144
N++ + + D +++++E G+L+ + G E+ +AT + + +A++ CH
Sbjct: 75 NILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERK 134
Query: 145 VMHRDLKPENFSFISRDDNALLKVTDFG-SALLFEEGQVYRDIVGSGFYIAPEVLRRR-Y 202
V+HRD+KPEN + LK+ DFG S R + G+ Y+ PE++ + +
Sbjct: 135 VIHRDIKPEN---LLMGYKGELKIADFGWSVH--APSLRRRTMCGTLDYLPPEMIEGKTH 189
Query: 203 GKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRR 262
+++D+W AGV+ Y L G+PPF + + T+ I+ ++ F P P +S +KDL+ +
Sbjct: 190 DEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKF---P-PFLSDGSKDLISK 245
Query: 263 MLTKDPKRRITAAQVLEHPWLRE 285
+L P +R+ V+EHPW++
Sbjct: 246 LLRYHPPQRLPLKGVMEHPWVKA 268
|
| >2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... Length = 276 | Back alignment and structure |
|---|
Score = 239 bits (611), Expect = 3e-76
Identities = 78/267 (29%), Positives = 126/267 (47%), Gaps = 14/267 (5%)
Query: 24 HYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQ 83
+ + LG G +G L T A K + K + EN I++EI I +
Sbjct: 8 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN--IKKEICI-NKMLNH 64
Query: 84 PNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSM 143
NVV+F + ++ +E C GG+LFDRI E DA ++ V H +
Sbjct: 65 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 124
Query: 144 GVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDI---VGSGFYIAPEVLRR 200
G+ HRD+KPEN + D+ LK++DFG A +F R + G+ Y+APE+L+R
Sbjct: 125 GITHRDIKPEN---LLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 181
Query: 201 R-Y-GKEIDIWSAGVILYILLSGVPPF-WAETKKGTYDAILQGEIDFDTDPWPSISSTAK 257
R + + +D+WS G++L +L+G P+ Y + + +PW I S
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKK--TYLNPWKKIDSAPL 239
Query: 258 DLVRRMLTKDPKRRITAAQVLEHPWLR 284
L+ ++L ++P RIT + + W
Sbjct: 240 ALLHKILVENPSARITIPDIKKDRWYN 266
|
| >3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313 | Back alignment and structure |
|---|
Score = 240 bits (614), Expect = 3e-76
Identities = 66/279 (23%), Positives = 116/279 (41%), Gaps = 28/279 (10%)
Query: 24 HYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQ 83
Y + +G G + N + YA K + + + D R EI L
Sbjct: 29 IYSILKQIGSGGSSKVFQVL-NEKKQIYAIKYVNLE-EADNQTLDSYRNEIAYLNKLQQH 86
Query: 84 -PNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHS 142
++ + +++VME C DL + K + + + ++ AV+ H
Sbjct: 87 SDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQ 145
Query: 143 MGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQ--VYRD-IVGSGFYIAPEVL- 198
G++H DLKP NF + +LK+ DFG A + V +D VG+ Y+ PE +
Sbjct: 146 HGIVHSDLKPANFLI----VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIK 201
Query: 199 -----------RRRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTD 247
+ + + D+WS G ILY + G PF + L ID + +
Sbjct: 202 DMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN---QISKLHAIIDPNHE 258
Query: 248 P--WPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLR 284
+D+++ L +DPK+RI+ ++L HP+++
Sbjct: 259 IEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 297
|
| >3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377 | Back alignment and structure |
|---|
Score = 242 bits (619), Expect = 3e-76
Identities = 35/306 (11%), Positives = 80/306 (26%), Gaps = 58/306 (18%)
Query: 24 HYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIR------ 77
G +LG+ T+ T + + ++ E+
Sbjct: 74 TLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGI 133
Query: 78 ------------------LYLSGQPNVVEFKSTYEDETA--VHVVMELCE------GGDL 111
+ + ++ + D + + G L
Sbjct: 134 KNQKQAKVHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVL 193
Query: 112 FDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDF 171
+ ++ + H G++H L+P + + + + +T F
Sbjct: 194 LSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDI-VLDQRGG--VFLTGF 250
Query: 172 GSALLFEEGQVYRDIVGSGFYIAPEVLRRR------------YGKEIDIWSAGVILYILL 219
+ S + PE+ RR D W+ G+++Y +
Sbjct: 251 EHLV---RDGARVVSSVSRGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIW 307
Query: 220 SGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLE 279
P + G + I + + I + L+ L + R+ Q +E
Sbjct: 308 CADLPITKDAALGGSEWIFRSCKN--------IPQPVRALLEGFLRYPKEDRLLPLQAME 359
Query: 280 HPWLRE 285
P +
Sbjct: 360 TPEYEQ 365
|
| >3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343 | Back alignment and structure |
|---|
Score = 241 bits (616), Expect = 5e-76
Identities = 74/338 (21%), Positives = 132/338 (39%), Gaps = 37/338 (10%)
Query: 24 HYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQ 83
Y + +G G + N + YA K + + + D R EI L
Sbjct: 10 IYSILKQIGSGGSSKVFQVL-NEKKQIYAIKYVNLE-EADNQTLDSYRNEIAYLNKLQQH 67
Query: 84 -PNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHS 142
++ + +++VME C DL + K + + + ++ AV+ H
Sbjct: 68 SDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQ 126
Query: 143 MGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQ--VYRD-IVGSGFYIAPEVL- 198
G++H DLKP NF + +LK+ DFG A + V +D VG+ Y+ PE +
Sbjct: 127 HGIVHSDLKPANFLI----VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIK 182
Query: 199 -----------RRRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTD 247
+ + + D+WS G ILY + G PF + + L ID + +
Sbjct: 183 DMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ---ISKLHAIIDPNHE 239
Query: 248 P--WPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRE---------SGEASDDTSVI 296
+D+++ L +DPK+RI+ ++L HP+++ G + V+
Sbjct: 240 IEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHPVNQMAKGTTEEMKYVL 299
Query: 297 LRMKQFRRMNKLKKLTIKVIVEYLPDEETQALKEKFIE 334
++ N + K + Y E + K E
Sbjct: 300 GQLVGLNSPNSILKAAKTLYEHYSGGESHNSSSSKTFE 337
|
| >3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* Length = 323 | Back alignment and structure |
|---|
Score = 237 bits (608), Expect = 5e-75
Identities = 78/267 (29%), Positives = 126/267 (47%), Gaps = 14/267 (5%)
Query: 24 HYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQ 83
+ + LG G +G L T A K + K + EN I++EI I +
Sbjct: 8 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN--IKKEICI-NKMLNH 64
Query: 84 PNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSM 143
NVV+F + ++ +E C GG+LFDRI E DA ++ V H +
Sbjct: 65 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 124
Query: 144 GVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDI---VGSGFYIAPEVLRR 200
G+ HRD+KPEN + D+ LK++DFG A +F R + G+ Y+APE+L+R
Sbjct: 125 GITHRDIKPEN---LLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 181
Query: 201 R-Y-GKEIDIWSAGVILYILLSGVPPF-WAETKKGTYDAILQGEIDFDTDPWPSISSTAK 257
R + + +D+WS G++L +L+G P+ Y + + +PW I S
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKK--TYLNPWKKIDSAPL 239
Query: 258 DLVRRMLTKDPKRRITAAQVLEHPWLR 284
L+ ++L ++P RIT + + W
Sbjct: 240 ALLHKILVENPSARITIPDIKKDRWYN 266
|
| >3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... Length = 320 | Back alignment and structure |
|---|
Score = 236 bits (605), Expect = 1e-74
Identities = 88/279 (31%), Positives = 133/279 (47%), Gaps = 22/279 (7%)
Query: 15 GKAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDM---IR 71
GK E + Y G +LG G FG Y S N P A K + K E +
Sbjct: 35 GKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 94
Query: 72 REIQI-RLYLSGQPNVVEFKSTYEDETAVHVVMELCEG-GDLFDRIIAKGYNSERDAATV 129
E+ + + SG V+ +E + +++E E DLFD I +G E A +
Sbjct: 95 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 154
Query: 130 LRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNAL-LKVTDFGSALLFEEGQVYRDIVG 188
++ AV CH+ GV+HRD+K EN I D N LK+ DFGS L ++ VY D G
Sbjct: 155 FWQVLEAVRHCHNCGVLHRDIKDEN---ILIDLNRGELKLIDFGSGALLKDT-VYTDFDG 210
Query: 189 SGFYIAPEVLR-RRY-GKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDT 246
+ Y PE +R RY G+ +WS G++LY ++ G PF + + I++G++ F
Sbjct: 211 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFF-- 262
Query: 247 DPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRE 285
+SS + L+R L P R T ++ HPW+++
Sbjct: 263 -R-QRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 299
|
| >2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* Length = 276 | Back alignment and structure |
|---|
Score = 234 bits (599), Expect = 2e-74
Identities = 93/264 (35%), Positives = 130/264 (49%), Gaps = 10/264 (3%)
Query: 24 HYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQ 83
HY G LG G FG + T A K + ++ L I+REIQ L L
Sbjct: 12 HYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQN-LKLFRH 70
Query: 84 PNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSM 143
P++++ T +VME GG+LFD I G E +A + + I++AV+ CH
Sbjct: 71 PHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRH 130
Query: 144 GVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLRRR-Y 202
V+HRDLKPEN + D + K+ DFG + + +G+ R GS Y APEV+ R Y
Sbjct: 131 MVVHRDLKPEN---VLLDAHMNAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLY 187
Query: 203 -GKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVR 261
G E+DIWS GVILY LL G PF E + I G F + ++ + L+
Sbjct: 188 AGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGV--FYIPEY--LNRSVATLLM 243
Query: 262 RMLTKDPKRRITAAQVLEHPWLRE 285
ML DP +R T + EH W ++
Sbjct: 244 HMLQVDPLKRATIKDIREHEWFKQ 267
|
| >2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390 | Back alignment and structure |
|---|
Score = 237 bits (607), Expect = 4e-74
Identities = 78/358 (21%), Positives = 138/358 (38%), Gaps = 44/358 (12%)
Query: 4 SVSKNQRDPILGKAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMR 63
S S N+ + G+ Y + +G G + N + YA K + + +
Sbjct: 44 SSSANECISVKGRIYS-------ILKQIGSGGSSKVFQVL-NEKKQIYAIKYVNLE-EAD 94
Query: 64 LAENDMIRREIQIRLYLSGQ-PNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNS 122
D R EI L ++ + +++VME C DL + K
Sbjct: 95 NQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSID 153
Query: 123 ERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQ- 181
+ + + ++ AV+ H G++H DLKP NF + +LK+ DFG A +
Sbjct: 154 PWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLI----VDGMLKLIDFGIANQMQPDTT 209
Query: 182 -VYRD-IVGSGFYIAPEVL------------RRRYGKEIDIWSAGVILYILLSGVPPFWA 227
V +D VG+ Y+ PE + + + + D+WS G ILY + G PF
Sbjct: 210 SVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQ 269
Query: 228 ETKKGTYDAILQGEIDFDTDP--WPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRE 285
+ L ID + + +D+++ L +DPK+RI+ ++L HP+++
Sbjct: 270 II---NQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQI 326
Query: 286 ---------SGEASDDTSVILRMKQFRRMNKLKKLTIKVIVEYLPDEETQALKEKFIE 334
G + V+ ++ N + K + Y E + K E
Sbjct: 327 QTHPVNQMAKGTTEEMKYVLGQLVGLNSPNSILKAAKTLYEHYSGGESHNSSSSKTFE 384
|
| >2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} Length = 312 | Back alignment and structure |
|---|
Score = 234 bits (600), Expect = 5e-74
Identities = 80/294 (27%), Positives = 123/294 (41%), Gaps = 22/294 (7%)
Query: 4 SVSKNQRDPILGKAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAK---KP 60
+ P GK E Y G +LG+G FG + + A K I +
Sbjct: 12 APPGTPTPPPGGKDREAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLG 71
Query: 61 KMRLAENDMIRREIQIRLYLSGQ---PNVVEFKSTYEDETAVHVVMEL-CEGGDLFDRII 116
L+++ E+ + + P V+ +E + +V+E DLFD I
Sbjct: 72 WSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYIT 131
Query: 117 AKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALL 176
KG E + +V A+ CHS GV+HRD+K EN I K+ DFGS L
Sbjct: 132 EKGPLGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDENI-LIDLRRGC-AKLIDFGSGAL 189
Query: 177 FEEGQVYRDIVGSGFYIAPEVLR-RRY-GKEIDIWSAGVILYILLSGVPPFWAETKKGTY 234
+ Y D G+ Y PE + +Y +WS G++LY ++ G PF + +
Sbjct: 190 LHDE-PYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQE---- 244
Query: 235 DAILQGEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGE 288
IL+ E+ F P +S L+RR L P R + ++L PW++ E
Sbjct: 245 --ILEAELHF---P-AHVSPDCCALIRRCLAPKPSSRPSLEEILLDPWMQTPAE 292
|
| >3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328 | Back alignment and structure |
|---|
Score = 235 bits (601), Expect = 6e-74
Identities = 83/264 (31%), Positives = 141/264 (53%), Gaps = 11/264 (4%)
Query: 24 HYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQ 83
+Y + +G+G F L T R A K I K ++ + RE++I + +
Sbjct: 16 NYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKT-QLNPTSLQKLFREVRI-MKILNH 73
Query: 84 PNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSM 143
PN+V+ E E ++++ME GG++FD ++A G E++A + R IV+AV CH
Sbjct: 74 PNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQK 133
Query: 144 GVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLRRR-Y 202
++HRDLK EN + D + +K+ DFG + F G G+ Y APE+ + + Y
Sbjct: 134 RIVHRDLKAEN---LLLDADMNIKIADFGFSNEFTVGGKLDAFCGAPPYAAPELFQGKKY 190
Query: 203 -GKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVR 261
G E+D+WS GVILY L+SG PF + K + +L+G+ + + +S+ ++L++
Sbjct: 191 DGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGK--YRIPFY--MSTDCENLLK 246
Query: 262 RMLTKDPKRRITAAQVLEHPWLRE 285
R L +P +R T Q+++ W+
Sbjct: 247 RFLVLNPIKRGTLEQIMKDRWINA 270
|
| >3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A Length = 361 | Back alignment and structure |
|---|
Score = 232 bits (593), Expect = 2e-72
Identities = 87/267 (32%), Positives = 127/267 (47%), Gaps = 14/267 (5%)
Query: 24 HYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQ 83
Y F + +G G FGV+ L + T A K I + + ++ ++REI
Sbjct: 21 RYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAI----DENVQREIIN-HRSLRH 75
Query: 84 PNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSM 143
PN+V FK T + ++ME GG+L++RI G SE +A + +++ V+ CHSM
Sbjct: 76 PNIVRFKEVILTPTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQQLLSGVSYCHSM 135
Query: 144 GVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLRRR-Y 202
+ HRDLK EN + LK+ DFG + + VG+ YIAPEVL R+ Y
Sbjct: 136 QICHRDLKLENT-LLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLRQEY 194
Query: 203 -GKEIDIWSAGVILYILLSGVPPF----WAETKKGTYDAILQGEIDFDTDPWPSISSTAK 257
GK D+WS GV LY++L G PF + T IL + D IS
Sbjct: 195 DGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYSIPDDIR--ISPECC 252
Query: 258 DLVRRMLTKDPKRRITAAQVLEHPWLR 284
L+ R+ DP RI+ ++ H W
Sbjct: 253 HLISRIFVADPATRISIPEIKTHSWFL 279
|
| >3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676 | Back alignment and structure |
|---|
Score = 240 bits (613), Expect = 3e-72
Identities = 77/427 (18%), Positives = 146/427 (34%), Gaps = 50/427 (11%)
Query: 24 HYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQ 83
+ LG G FG T A K ++ + E EIQI +
Sbjct: 15 PWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRER--WCLEIQI-MKKLNH 71
Query: 84 PNVVEFKSTYEDETAVH------VVMELCEGGDLFDRIIAKGYN---SERDAATVLRAIV 134
PNVV + + + + ME CEGGDL + E T+L I
Sbjct: 72 PNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDIS 131
Query: 135 NAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIA 194
+A+ H ++HRDLKPEN + K+ D G A ++G++ + VG+ Y+A
Sbjct: 132 SALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLA 191
Query: 195 PEVLRRR-YGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSIS 253
PE+L ++ Y +D WS G + + ++G PF + + ++ + + + ++
Sbjct: 192 PELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHIVVYDDLT 251
Query: 254 ST--------------------AKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASDDT 293
+ ++ ML ++R T Q +
Sbjct: 252 GAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQA-------- 303
Query: 294 SVILRMKQFRRMNKLKKLTIKVIVEYLPDEETQALKEKFIEMDTD---KNGTLSYDELRA 350
+ + + ++ + ++ +V + + E + +++ DT + L A
Sbjct: 304 --LDSILSLKLLSVMNMVSGRVHTYPVTENENLQNLKSWLQQDTGIPEEEQELLQASGLA 361
Query: 351 GLTKVGSMLTEFDVKHLMEAVKNSSTL----ESLCENLPTKEKQKLMEKFREMDTDNSDT 406
+ D + + P E + D
Sbjct: 362 LNSAQPLTQYVIDCTVIDGRQGEGDLIFLFDNRKTVYEPQISLPAHPESVSIVLQDPKRP 421
Query: 407 LTLSELK 413
LT + L+
Sbjct: 422 LTYTHLR 428
|
| >3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311 | Back alignment and structure |
|---|
Score = 229 bits (587), Expect = 4e-72
Identities = 66/264 (25%), Positives = 103/264 (39%), Gaps = 13/264 (4%)
Query: 24 HYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQ 83
+ LG G +G + R YA K P + E+ +
Sbjct: 58 SFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRS-MSPFRGPKDRARKLAEVGSHEKVGQH 116
Query: 84 PNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYN-SERDAATVLRAIVNAVNVCHS 142
P V + +E+ +++ ELC G L A G + E LR + A+ HS
Sbjct: 117 PCCVRLEQAWEEGGILYLQTELC-GPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHS 175
Query: 143 MGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLRRRY 202
G++H D+KP N F+ K+ DFG + G Y+APE+L+ Y
Sbjct: 176 QGLVHLDVKPANI-FLGPRGR--CKLGDFGLLVELGTAGAGEVQEGDPRYMAPELLQGSY 232
Query: 203 GKEIDIWSAGVILYILLSGVP-PFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVR 261
G D++S G+ + + + P E + L E +SS + ++
Sbjct: 233 GTAADVFSLGLTILEVACNMELPHGGEGWQQLRQGYLPPEF------TAGLSSELRSVLV 286
Query: 262 RMLTKDPKRRITAAQVLEHPWLRE 285
ML DPK R TA +L P LR+
Sbjct: 287 MMLEPDPKLRATAEALLALPVLRQ 310
|
| >2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348 | Back alignment and structure |
|---|
Score = 231 bits (590), Expect = 4e-72
Identities = 64/324 (19%), Positives = 127/324 (39%), Gaps = 49/324 (15%)
Query: 24 HYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAE--------------NDM 69
Y R L +G+F LC + N+ YA K K + + D
Sbjct: 32 DYRIIRTLNQGKFNKIILCEK--DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDD 89
Query: 70 IRREIQIRLYLSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYN-------- 121
+ E+QI + + + + V+++ E E +
Sbjct: 90 FKNELQI-ITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFI 148
Query: 122 SERDAATVLRAIVNAVNVCHS-MGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEG 180
+ ++++++N+ + H+ + HRD+KP N I D N +K++DFG + +
Sbjct: 149 PIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSN---ILMDKNGRVKLSDFGESEYMVDK 205
Query: 181 QVYRDIVGSGFYIAPEVLRRR---YGKEIDIWSAGVILYILLSGVPPFWAE-TKKGTYDA 236
++ + G+ ++ PE G ++DIWS G+ LY++ V PF + + ++
Sbjct: 206 KI-KGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELFNN 264
Query: 237 ILQGEIDF---------------DTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHP 281
I I++ T +S+ D ++ L K+P RIT+ L+H
Sbjct: 265 IRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKHE 324
Query: 282 WLRESGEASDDTSVILRMKQFRRM 305
WL ++ K+ +++
Sbjct: 325 WLADTNIEDLREFSKELYKKRKKL 348
|
| >4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350 | Back alignment and structure |
|---|
Score = 230 bits (589), Expect = 6e-72
Identities = 77/299 (25%), Positives = 139/299 (46%), Gaps = 14/299 (4%)
Query: 22 MLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLS 81
M Y + +G G FG + L R Y K I +M E + RRE+ + +
Sbjct: 23 MEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEI-NISRMSSKEREESRREVAVLANMK 81
Query: 82 GQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIA--KGYNSERDAATVLRAIVNAVNV 139
PN+V+++ ++E+ ++++VM+ CEGGDLF RI A E I A+
Sbjct: 82 -HPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKH 140
Query: 140 CHSMGVMHRDLKPENFSFISRDDNALLKVTDFG-SALLFEEGQVYRDIVGSGFYIAPEVL 198
H ++HRD+K +N F+++D +++ DFG + +L ++ R +G+ +Y++PE+
Sbjct: 141 VHDRKILHRDIKSQNI-FLTKDGT--VQLGDFGIARVLNSTVELARACIGTPYYLSPEIC 197
Query: 199 RRR-YGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPS-ISSTA 256
+ Y + DIW+ G +LY L + F A + K I+ G P S
Sbjct: 198 ENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGSFP----PVSLHYSYDL 253
Query: 257 KDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASDDTSVILRMKQFRRMNKLKKLTIKV 315
+ LV ++ ++P+ R + +LE ++ + E +I + +K I
Sbjct: 254 RSLVSQLFKRNPRDRPSVNSILEKGFIAKRIEKFLSPQLIAEEFCLKTFSKFGSQPIPA 312
|
| >3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} Length = 336 | Back alignment and structure |
|---|
Score = 229 bits (585), Expect = 2e-71
Identities = 93/336 (27%), Positives = 159/336 (47%), Gaps = 33/336 (9%)
Query: 24 HYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDM---IRREIQIRLYL 80
Y LG G FG L T T + A K I+++ L ++DM + REI L L
Sbjct: 10 PYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQ---LLKKSDMHMRVEREISY-LKL 65
Query: 81 SGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVC 140
P++++ T + +V+E GG+LFD I+ K +E + + I+ A+ C
Sbjct: 66 LRHPHIIKLYDVITTPTDIVMVIEYA-GGELFDYIVEKKRMTEDEGRRFFQQIICAIEYC 124
Query: 141 HSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLRR 200
H ++HRDLKPEN + DDN +K+ DFG + + +G + GS Y APEV+
Sbjct: 125 HRHKIVHRDLKPEN---LLLDDNLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVING 181
Query: 201 R-Y-GKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKD 258
+ Y G E+D+WS G++LY++L G PF E + + + + +S A+
Sbjct: 182 KLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKKVNSCV--YVMPDF--LSPGAQS 237
Query: 259 LVRRMLTKDPKRRITAAQVLEHPWLR-----------ESGEASDDTSVILRMKQFRRMNK 307
L+RRM+ DP +RIT ++ PW E + D+ ++ ++ + M
Sbjct: 238 LIRRMIVADPMQRITIQEIRRDPWFNVNLPDYLRPMEEVQGSYADSRIVSKLGE--AMGF 295
Query: 308 LKKLTIKVIVEYLPDEETQA---LKEKFIEMDTDKN 340
+ ++ + +E +A L E + + ++
Sbjct: 296 SEDYIVEALRSDENNEVKEAYNLLHENQVIQEKLEH 331
|
| >2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279 | Back alignment and structure |
|---|
Score = 225 bits (577), Expect = 4e-71
Identities = 80/278 (28%), Positives = 125/278 (44%), Gaps = 23/278 (8%)
Query: 22 MLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLS 81
Y +G G +G S + K + M AE M+ E+ + L
Sbjct: 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKEL-DYGSMTEAEKQMLVSEVNLLRELK 63
Query: 82 GQPNVVEFKSTYEDETA--VHVVMELCEGGDLFDRII----AKGYNSERDAATVLRAIVN 135
PN+V + D T +++VME CEGGDL I + Y E V+ +
Sbjct: 64 -HPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTL 122
Query: 136 AVNVCHSMG-----VMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVY-RDIVGS 189
A+ CH V+HRDLKP N F+ N +K+ DFG A + + + VG+
Sbjct: 123 ALKECHRRSDGGHTVLHRDLKPANV-FLDGKQN--VKLGDFGLARILNHDTSFAKTFVGT 179
Query: 190 GFYIAPEVLRRR-YGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDP 248
+Y++PE + R Y ++ DIWS G +LY L + +PPF A ++K I +G+
Sbjct: 180 PYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFR----R 235
Query: 249 WPSI-SSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRE 285
P S +++ RML R + ++LE+P + E
Sbjct: 236 IPYRYSDELNEIITRMLNLKDYHRPSVEEILENPLILE 273
|
| >3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} Length = 335 | Back alignment and structure |
|---|
Score = 227 bits (581), Expect = 7e-71
Identities = 76/276 (27%), Positives = 123/276 (44%), Gaps = 22/276 (7%)
Query: 24 HYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKK-----PKMRLAENDMIRREIQIRL 78
Y LG G FG + + N+ K I K+ + + + EI I
Sbjct: 25 KYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILS 84
Query: 79 YLSGQPNVVEFKSTYEDETAVHVVMEL-CEGGDLFDRIIAKGYNSERDAATVLRAIVNAV 137
+ N+++ +E++ +VME G DLF I E A+ + R +V+AV
Sbjct: 85 RVE-HANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAV 143
Query: 138 NVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEV 197
++HRD+K EN I ++ +K+ DFGSA E G+++ G+ Y APEV
Sbjct: 144 GYLRLKDIIHRDIKDEN---IVIAEDFTIKLIDFGSAAYLERGKLFYTFCGTIEYCAPEV 200
Query: 198 LRRR-Y-GKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISST 255
L Y G E+++WS GV LY L+ PF + ++ I P+ +S
Sbjct: 201 LMGNPYRGPELEMWSLGVTLYTLVFEENPF------CELEETVEAAIHP---PYL-VSKE 250
Query: 256 AKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASD 291
LV +L P+RR T +++ PW+ + +D
Sbjct: 251 LMSLVSGLLQPVPERRTTLEKLVTDPWVTQPVNLAD 286
|
| >2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} Length = 476 | Back alignment and structure |
|---|
Score = 231 bits (590), Expect = 1e-70
Identities = 91/264 (34%), Positives = 134/264 (50%), Gaps = 10/264 (3%)
Query: 24 HYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQ 83
HY G LG G FG + T A K + ++ L IRREIQ L L
Sbjct: 17 HYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQN-LKLFRH 75
Query: 84 PNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSM 143
P++++ + + +VME GG+LFD I G E+++ + + I++ V+ CH
Sbjct: 76 PHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRH 135
Query: 144 GVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLRRR-Y 202
V+HRDLKPEN + D + K+ DFG + + +G+ R GS Y APEV+ R Y
Sbjct: 136 MVVHRDLKPEN---VLLDAHMNAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLY 192
Query: 203 -GKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVR 261
G E+DIWS+GVILY LL G PF + + I G F T + ++ + L++
Sbjct: 193 AGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDGI--FYTPQY--LNPSVISLLK 248
Query: 262 RMLTKDPKRRITAAQVLEHPWLRE 285
ML DP +R T + EH W ++
Sbjct: 249 HMLQVDPMKRATIKDIREHEWFKQ 272
|
| >2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} Length = 298 | Back alignment and structure |
|---|
Score = 225 bits (575), Expect = 2e-70
Identities = 79/292 (27%), Positives = 127/292 (43%), Gaps = 39/292 (13%)
Query: 24 HYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKK--------------------PKMR 63
Y +G+G +GV L + N YA K ++KK P
Sbjct: 14 QYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGC 73
Query: 64 LAENDM---IRREIQIRLYLSGQPNVVEFKSTYEDETAVHV--VMELCEGGDLFDRIIAK 118
+ + +EI I L PNVV+ +D H+ V EL G + + +
Sbjct: 74 IQPRGPIEQVYQEIAI-LKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVME-VPTL 131
Query: 119 GYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFG-SALLF 177
SE A + ++ + H ++HRD+KP N + ++ +K+ DFG S
Sbjct: 132 KPLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSN---LLVGEDGHIKIADFGVSNEFK 188
Query: 178 EEGQVYRDIVGSGFYIAPEVL---RRRY-GKEIDIWSAGVILYILLSGVPPFWAETKKGT 233
+ + VG+ ++APE L R+ + GK +D+W+ GV LY + G PF E
Sbjct: 189 GSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIMCL 248
Query: 234 YDAILQGEIDFDTDP-WPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLR 284
+ I ++F P P I+ KDL+ RML K+P+ RI ++ HPW+
Sbjct: 249 HSKIKSQALEF---PDQPDIAEDLKDLITRMLDKNPESRIVVPEIKLHPWVT 297
|
| >2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310 | Back alignment and structure |
|---|
Score = 211 bits (539), Expect = 5e-65
Identities = 68/293 (23%), Positives = 119/293 (40%), Gaps = 22/293 (7%)
Query: 6 SKNQRDPILGKAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLA 65
+ + + + ++ + +GRGQF Y P A K + M
Sbjct: 15 QFQPQKALRPDMGYNTLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAK 74
Query: 66 ENDMIRREIQIRLYLSG--QPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYN-- 121
+EI + L PNV+++ +++ ++ +++V+EL + GDL I
Sbjct: 75 ARADCIKEIDL---LKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKR 131
Query: 122 --SERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFG-SALLFE 178
ER + +A+ HS VMHRD+KP N FI+ +K+ D G
Sbjct: 132 LIPERTVWKYFVQLCSALEHMHSRRVMHRDIKPANV-FITATGV--VKLGDLGLGRFFSS 188
Query: 179 EGQVYRDIVGSGFYIAPEVLRRR-YGKEIDIWSAGVILYILLSGVPPFWAETK--KGTYD 235
+ +VG+ +Y++PE + Y + DIWS G +LY + + PF+ +
Sbjct: 189 KTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCK 248
Query: 236 AILQGEIDFDTDPWPS--ISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRES 286
I Q + P PS S + LV + DP++R V + +
Sbjct: 249 KIEQCDY----PPLPSDHYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMHA 297
|
| >2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} Length = 305 | Back alignment and structure |
|---|
Score = 210 bits (538), Expect = 5e-65
Identities = 72/274 (26%), Positives = 122/274 (44%), Gaps = 22/274 (8%)
Query: 24 HYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDM--IRREIQIRLYLS 81
Y G +LG G +G ++ T A K I KK K+R N +++EIQ+ L
Sbjct: 6 KYLMGDLLGEGSYGKVKEVLDSETLCRRAVK-ILKKKKLRRIPNGEANVKKEIQL-LRRL 63
Query: 82 GQPNVVEFKSTYEDETAVH--VVMELCEGG--DLFDRIIAKGYNSERDAATVLRAIVNAV 137
NV++ +E +VME C G ++ D + + A +++ +
Sbjct: 64 RHKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSV-PEKRFPVCQAHGYFCQLIDGL 122
Query: 138 NVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFG-SALL--FEEGQVYRDIVGSGFYIA 194
HS G++H+D+KP N + LK++ G + L F R GS +
Sbjct: 123 EYLHSQGIVHKDIKPGN---LLLTTGGTLKISALGVAEALHPFAADDTCRTSQGSPAFQP 179
Query: 195 PEVLR--RRY-GKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPS 251
PE+ + G ++DIWSAGV LY + +G+ PF + ++ I +G +
Sbjct: 180 PEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENIGKGS--YAIPGD-- 235
Query: 252 ISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRE 285
DL++ ML +P +R + Q+ +H W R+
Sbjct: 236 CGPPLSDLLKGMLEYEPAKRFSIRQIRQHSWFRK 269
|
| >2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317 | Back alignment and structure |
|---|
Score = 211 bits (539), Expect = 6e-65
Identities = 65/297 (21%), Positives = 107/297 (36%), Gaps = 32/297 (10%)
Query: 24 HYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQ 83
HY F + LG G F L YA K I + + +RE + L
Sbjct: 30 HYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCH---EQQDREEAQREADM-HRLFNH 85
Query: 84 PNVVEFKSTYEDETA----VHVVMELCEGGDLFDRI----IAKGYNSERDAATVLRAIVN 135
PN++ + E +++ + G L++ I + +E +L I
Sbjct: 86 PNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICR 145
Query: 136 AVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALL----------FEEGQVYRD 185
+ H+ G HRDLKP N + + + D GS Q +
Sbjct: 146 GLEAIHAKGYAHRDLKPTNI-LLGDEGQ--PVLMDLGSMNQACIHVEGSRQALTLQDWAA 202
Query: 186 IVGSGFYIAPEVL----RRRYGKEIDIWSAGVILYILLSGVPPFWAETKKG-TYDAILQG 240
+ Y APE+ + D+WS G +LY ++ G P+ +KG + +Q
Sbjct: 203 QRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQN 262
Query: 241 EIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASDDTSVIL 297
++ P SS L+ M+T DP +R +L + T+ IL
Sbjct: 263 QLSIP--QSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQPPAPGQHTTQIL 317
|
| >2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284 | Back alignment and structure |
|---|
Score = 208 bits (532), Expect = 3e-64
Identities = 57/280 (20%), Positives = 107/280 (38%), Gaps = 38/280 (13%)
Query: 25 YFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQP 84
+ ++G G FG + + Y K + N+ RE++ L
Sbjct: 13 FKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKY-------NNEKAEREVKALAKLD-HV 64
Query: 85 NVVEFKSTYEDETA----------------VHVVMELCEGGDLFDRIIAK--GYNSERDA 126
N+V + ++ + + ME C+ G L I + + A
Sbjct: 65 NIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLA 124
Query: 127 ATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDI 186
+ I V+ HS +++RDLKP N F+ +K+ DFG +
Sbjct: 125 LELFEQITKGVDYIHSKKLINRDLKPSNI-FLVDTKQ--VKIGDFGLVTSLKNDGKRTRS 181
Query: 187 VGSGFYIAPEVLRRR-YGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFD 245
G+ Y++PE + + YGKE+D+++ G+IL LL + + G I
Sbjct: 182 KGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTA--FETSKFFTDLRDGIIS-- 237
Query: 246 TDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRE 285
K L++++L+K P+ R +++L + +
Sbjct: 238 ----DIFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWK 273
|
| >3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413 | Back alignment and structure |
|---|
Score = 211 bits (539), Expect = 5e-64
Identities = 35/303 (11%), Positives = 81/303 (26%), Gaps = 55/303 (18%)
Query: 25 YFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQI-------- 76
G +LG+ T+ T + + ++ E+
Sbjct: 80 LVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIK 139
Query: 77 ----------------RLYLSGQPNVVEFKSTYEDETAVH--VVMELCEG------GDLF 112
+ + ++ + D + + + L
Sbjct: 140 NQKQAKVHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLL 199
Query: 113 DRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFG 172
+ ++ + H G++H L+P + + + + +T F
Sbjct: 200 SHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDI-VLDQRGG--VFLTGFE 256
Query: 173 SALLFEEGQVYRDIVGSGF----YIAPEVLRRR------YGKEIDIWSAGVILYILLSGV 222
+ +G +G GF A +L D W+ G+ +Y +
Sbjct: 257 HLV--RDGASAVSPIGRGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCAD 314
Query: 223 PPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPW 282
P + G + I + + I + L+ L + R+ Q +E P
Sbjct: 315 LPNTDDAALGGSEWIFRSCKN--------IPQPVRALLEGFLRYPKEDRLLPLQAMETPE 366
Query: 283 LRE 285
+
Sbjct: 367 YEQ 369
|
| >4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299 | Back alignment and structure |
|---|
Score = 207 bits (529), Expect = 1e-63
Identities = 69/293 (23%), Positives = 118/293 (40%), Gaps = 40/293 (13%)
Query: 22 MLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLS 81
+ + + LGRG FGV + + YA K I + + + RE++ L
Sbjct: 4 LTDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNREL--AREKVMREVKALAKLE 61
Query: 82 GQPNVVEFKSTYEDETA------------VHVVMELCEGGDLFDRIIAKGYNSERDAATV 129
P +V + + + ++ +++ M+LC +L D + + ER+ +
Sbjct: 62 -HPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVC 120
Query: 130 LRA---IVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSA------------ 174
L I AV HS G+MHRDLKP N F + DD +KV DFG
Sbjct: 121 LHIFLQIAEAVEFLHSKGLMHRDLKPSNI-FFTMDDV--VKVGDFGLVTAMDQDEEEQTV 177
Query: 175 -LLFEEGQVYRDIVGSGFYIAPEVLR-RRYGKEIDIWSAGVILYILLSGVPPFWAETKKG 232
+ VG+ Y++PE + Y ++DI+S G+IL+ LL P +
Sbjct: 178 LTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL--YPFSTQMERVR 235
Query: 233 TYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRE 285
T + + + +V+ ML+ P R A ++E+ +
Sbjct: 236 TLTDVRNLKFP---PLFTQKYPCEYVMVQDMLSPSPMERPEAINIIENAVFED 285
|
| >3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337 | Back alignment and structure |
|---|
Score = 202 bits (515), Expect = 3e-61
Identities = 75/311 (24%), Positives = 127/311 (40%), Gaps = 42/311 (13%)
Query: 1 MGCSVSKNQRDPILGKAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKP 60
+G + ++Q D + G+ E L R+L G F Y + + R YA K +
Sbjct: 7 LGGASGRDQSDFV-GQTVELGELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNE 65
Query: 61 KMRLAENDMIRREIQIRLYLSGQPNVVEF--------KSTYEDETAVHVVMELCEGG--D 110
+ + I +E+ LSG PN+V+F + + + ++ ELC+G +
Sbjct: 66 EEKN---RAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVE 122
Query: 111 LFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMG--VMHRDLKPENFSFISRDDNALLKV 168
++ ++G S + AV H ++HRDLK EN +S +K+
Sbjct: 123 FLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENL-LLSNQGT--IKL 179
Query: 169 TDFGSALLF-----------EEGQVYRDI--VGSGFYIAPEVL----RRRYGKEIDIWSA 211
DFGSA V +I + Y PE++ G++ DIW+
Sbjct: 180 CDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWAL 239
Query: 212 GVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKDPKRR 271
G ILY+L PF K I+ G+ P + + L+R ML +P+ R
Sbjct: 240 GCILYLLCFRQHPFEDGAKL----RIVNGKYSIP--PHDTQYTVFHSLIRAMLQVNPEER 293
Query: 272 ITAAQVLEHPW 282
++ A+V+
Sbjct: 294 LSIAEVVHQLQ 304
|
| >1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289 | Back alignment and structure |
|---|
Score = 195 bits (498), Expect = 3e-59
Identities = 66/289 (22%), Positives = 113/289 (39%), Gaps = 36/289 (12%)
Query: 24 HYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQ 83
+ +G G+FG + C + YA K KKP + RE+ L
Sbjct: 12 EFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRS-KKPLAGSVDEQNALREVYAHAVLGQH 70
Query: 84 PNVVEFKSTYEDETAVHVVMELCEGGDLFDRI----IAKGYNSERDAATVLRAIVNAVNV 139
+VV + S + ++ + + E C GG L D I Y E + +L + +
Sbjct: 71 SHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRY 130
Query: 140 CHSMGVMHRDLKPENFSFISRD-----------------DNALLKVTDFGSALLFEEGQV 182
HSM ++H D+KP N FISR + + K+ D G QV
Sbjct: 131 IHSMSLVHMDIKPSNI-FISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQV 189
Query: 183 YRDIVGSGFYIAPEVLR--RRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQG 240
G ++A EVL+ + + DI++ + + P + + I QG
Sbjct: 190 E---EGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGDQ---WHEIRQG 243
Query: 241 EIDFDTDPWPS-ISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGE 288
+ P +S +L++ M+ DP+RR +A +++H L +
Sbjct: 244 RL----PRIPQVLSQEFTELLKVMIHPDPERRPSAMALVKHSVLLSASR 288
|
| >1uu3_A HPDK1, 3-phosphoinositide dependent protein kinase-1; PKB, inhibitor, LY333531, diabetes, cancer, transferase, serine/threonine-protein kinase; HET: SEP LY4; 1.7A {Homo sapiens} SCOP: d.144.1.7 PDB: 1okz_A* 1oky_A* 1uu7_A* 1uu8_A* 2biy_A* 3rwp_A* 2xch_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* ... Length = 310 | Back alignment and structure |
|---|
Score = 190 bits (485), Expect = 5e-57
Identities = 79/269 (29%), Positives = 135/269 (50%), Gaps = 18/269 (6%)
Query: 27 FGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNV 86
FG++LG G F L E +T+R YA K + K+ ++ + + RE + + P
Sbjct: 34 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDV-MSRLDHPFF 92
Query: 87 VEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVM 146
V+ T++D+ ++ + + G+L I G E IV+A+ H G++
Sbjct: 93 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGII 152
Query: 147 HRDLKPENFSFISRDDNALLKVTDFGSA-LLFEEGQVYRD--IVGSGFYIAPEVLRRR-Y 202
HRDLKPEN I +++ +++TDFG+A +L E + R VG+ Y++PE+L +
Sbjct: 153 HRDLKPEN---ILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSA 209
Query: 203 GKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRR 262
K D+W+ G I+Y L++G+PPF A + + I++ E DF P A+DLV +
Sbjct: 210 CKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDF---P-EKFFPKARDLVEK 265
Query: 263 MLTKDPKRRIT------AAQVLEHPWLRE 285
+L D +R+ + HP+
Sbjct: 266 LLVLDATKRLGCEEMEGYGPLKAHPFFES 294
|
| >3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* Length = 410 | Back alignment and structure |
|---|
Score = 176 bits (449), Expect = 1e-50
Identities = 83/267 (31%), Positives = 138/267 (51%), Gaps = 16/267 (5%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVE 88
+++GRG FG L ST + YA K ++K ++ +++ E I + + P VV+
Sbjct: 75 KVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDI-MAFANSPWVVQ 133
Query: 89 FKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHR 148
++D+ +++VME GGDL +++ E+ A +V A++ HSMG +HR
Sbjct: 134 LFYAFQDDRYLYMVMEYMPGGDLV-NLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIHR 192
Query: 149 DLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRD--IVGSGFYIAPEVLRR-----R 201
D+KP+N + D + LK+ DFG+ + + + R VG+ YI+PEVL+
Sbjct: 193 DVKPDN---MLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGY 249
Query: 202 YGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVR 261
YG+E D WS GV LY +L G PF+A++ GTY I+ + IS AK+L+
Sbjct: 250 YGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKEAKNLIC 309
Query: 262 RMLTKDPKRRIT---AAQVLEHPWLRE 285
LT D + R+ ++ H + +
Sbjct: 310 AFLT-DREVRLGRNGVEEIKRHLFFKN 335
|
| >1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... Length = 350 | Back alignment and structure |
|---|
Score = 173 bits (441), Expect = 4e-50
Identities = 77/265 (29%), Positives = 128/265 (48%), Gaps = 16/265 (6%)
Query: 27 FGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNV 86
+ LG G FG L + YA K + K+ ++L + + E +I L P +
Sbjct: 45 RIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRI-LQAVNFPFL 103
Query: 87 VEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVM 146
V+ + +++D + +++VME GG++F + G SE A IV HS+ ++
Sbjct: 104 VKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 163
Query: 147 HRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLRRR-YGKE 205
+RDLKPEN + D ++VTDFG A + G+ +APE++ + Y K
Sbjct: 164 YRDLKPEN---LLIDQQGYIQVTDFGFAK--RVKGRTWTLCGTPEALAPEIILSKGYNKA 218
Query: 206 IDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLT 265
+D W+ GV++Y + +G PPF+A+ Y+ I+ G++ F P SS KDL+R +L
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF---P-SHFSSDLKDLLRNLLQ 274
Query: 266 KDPKRRI-----TAAQVLEHPWLRE 285
D +R + H W
Sbjct: 275 VDLTKRFGNLKNGVNDIKNHKWFAT 299
|
| >3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365 | Back alignment and structure |
|---|
Score = 173 bits (439), Expect = 9e-50
Identities = 53/314 (16%), Positives = 104/314 (33%), Gaps = 37/314 (11%)
Query: 24 HYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIA-KKPKMRLAENDMIRREIQIRLYLSG 82
+ +LG G F Y T+ N + K K I ++ RL S
Sbjct: 66 LVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPANPWEFYIGTQLMERLKPSM 125
Query: 83 QPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYN-----SERDAATVLRAIVNAV 137
Q ++F S + + +V EL G L + I + + ++ +
Sbjct: 126 QHMFMKFYSAHLFQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMI 185
Query: 138 NVCHSMGVMHRDLKPENF--------SFISRDDNALLKVTDFGSAL---LFEEGQVYRDI 186
H ++H D+KP+NF D +A L + D G ++ LF +G ++
Sbjct: 186 EQVHDCEIIHGDIKPDNFILGNGFLEQDDEDDLSAGLALIDLGQSIDMKLFPKGTIFTAK 245
Query: 187 VGSGFYIAPEVLRRR-YGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFD 245
+ + E+L + + +ID + +Y +L G L +
Sbjct: 246 CETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGECKPEGLFRRL-PH 304
Query: 246 TDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASDDTSVILRMKQFRRM 305
D W + ML + + +L + + + ++
Sbjct: 305 LDMW-------NEFFHVMLNIPDCHHLPSLDLLRQKLKK-----------VFQQHYTNKI 346
Query: 306 NKLKKLTIKVIVEY 319
L+ I +++E
Sbjct: 347 RALRNRLIVLLLEC 360
|
| >1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 Length = 318 | Back alignment and structure |
|---|
Score = 170 bits (434), Expect = 2e-49
Identities = 88/274 (32%), Positives = 135/274 (49%), Gaps = 34/274 (12%)
Query: 27 FGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNV 86
R LG G FG +L R YA K + K+ +RL + + E + L + P +
Sbjct: 10 ILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLM-LSIVTHPFI 68
Query: 87 VEFKSTYEDETAVHVVMELCEGGDLFDRI---------IAKGYNSERDAATVLRAIVNAV 137
+ T++D + ++M+ EGG+LF + +AK Y +E + A+
Sbjct: 69 IRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAE---------VCLAL 119
Query: 138 NVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEV 197
HS +++RDLKPEN I D N +K+TDFG A V + G+ YIAPEV
Sbjct: 120 EYLHSKDIIYRDLKPEN---ILLDKNGHIKITDFGFAK--YVPDVTYTLCGTPDYIAPEV 174
Query: 198 LRRR-YGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTA 256
+ + Y K ID WS G+++Y +L+G PF+ TY+ IL E+ F P P +
Sbjct: 175 VSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRF---P-PFFNEDV 230
Query: 257 KDLVRRMLTKDPKRRI-----TAAQVLEHPWLRE 285
KDL+ R++T+D +R+ V HPW +E
Sbjct: 231 KDLLSRLITRDLSQRLGNLQNGTEDVKNHPWFKE 264
|
| >4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* Length = 437 | Back alignment and structure |
|---|
Score = 174 bits (442), Expect = 2e-49
Identities = 81/269 (30%), Positives = 132/269 (49%), Gaps = 16/269 (5%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVE 88
+++GRG FG + + ++ +A K + K ++ AE R E + L +
Sbjct: 80 KVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDV-LVNGDSKWITT 138
Query: 89 FKSTYEDETAVHVVMELCEGGDLFDRII-AKGYNSERDAATVLRAIVNAVNVCHSMGVMH 147
++D+ +++VM+ GGDL + + E A L +V A++ H + +H
Sbjct: 139 LHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHYVH 198
Query: 148 RDLKPENFSFISRDDNALLKVTDFGSAL-LFEEGQVYRD-IVGSGFYIAPEVL------R 199
RD+KP+N I D N +++ DFGS L L E+G V VG+ YI+PE+L +
Sbjct: 199 RDIKPDN---ILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGK 255
Query: 200 RRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPS-ISSTAKD 258
RYG E D WS GV +Y +L G PF+AE+ TY I+ + F + +S AKD
Sbjct: 256 GRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFPTQVTDVSENAKD 315
Query: 259 LVRRMLTKDPKR--RITAAQVLEHPWLRE 285
L+RR++ R + +HP+
Sbjct: 316 LIRRLICSREHRLGQNGIEDFKKHPFFSG 344
|
| >3pvu_A Beta-adrenergic receptor kinase 1; transferase, serine/threonine-protein kinase, ATP-binding, I membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A* 3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A* 1bak_A Length = 695 | Back alignment and structure |
|---|
Score = 177 bits (450), Expect = 7e-49
Identities = 73/269 (27%), Positives = 118/269 (43%), Gaps = 20/269 (7%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQI--RLYLSGQPNV 86
R++GRG FG Y C + T + YA K + KK + E + + P +
Sbjct: 195 RIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFI 254
Query: 87 VEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVM 146
V + + +++L GGDL + G SE D I+ + H+ V+
Sbjct: 255 VCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVV 314
Query: 147 HRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLRR--RYGK 204
+RDLKP N I D++ ++++D G A F + + + VG+ Y+APEVL++ Y
Sbjct: 315 YRDLKPAN---ILLDEHGHVRISDLGLACDFSKKKPH-ASVGTHGYMAPEVLQKGVAYDS 370
Query: 205 EIDIWSAGVILYILLSGVPPFWAETKKGT---YDAILQGEIDFDTDPWPSISSTAKDLVR 261
D +S G +L+ LL G PF K L ++ S S + L+
Sbjct: 371 SADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELP----DSFSPELRSLLE 426
Query: 262 RMLTKDPKRRI-----TAAQVLEHPWLRE 285
+L +D RR+ A +V E P+ R
Sbjct: 427 GLLQRDVNRRLGCLGRGAQEVKESPFFRS 455
|
| >2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} Length = 412 | Back alignment and structure |
|---|
Score = 169 bits (430), Expect = 5e-48
Identities = 76/268 (28%), Positives = 123/268 (45%), Gaps = 18/268 (6%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVE 88
+++GRG F + T + YA K + K ++ E R E + L + + +
Sbjct: 67 KVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDV-LVNGDRRWITQ 125
Query: 89 FKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRA-IVNAVNVCHSMGVMH 147
++DE +++VME GGDL + G + A A IV A++ H +G +H
Sbjct: 126 LHFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLGYVH 185
Query: 148 RDLKPENFSFISRDDNALLKVTDFGSAL-LFEEGQVYRD-IVGSGFYIAPEVLRR----- 200
RD+KP+N I D +++ DFGS L L +G V VG+ Y++PE+L+
Sbjct: 186 RDIKPDN---ILLDRCGHIRLADFGSCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGP 242
Query: 201 ---RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPS-ISSTA 256
YG E D W+ GV Y + G PF+A++ TY I+ + + A
Sbjct: 243 GTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVHYKEHLSLPLVDEGVPEEA 302
Query: 257 KDLVRRMLTKDPKR--RITAAQVLEHPW 282
+D ++R+L R R A HP+
Sbjct: 303 RDFIQRLLCPPETRLGRGGAGDFRTHPF 330
|
| >4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} Length = 384 | Back alignment and structure |
|---|
Score = 165 bits (421), Expect = 6e-47
Identities = 66/265 (24%), Positives = 123/265 (46%), Gaps = 16/265 (6%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVE 88
R +G+G FG + +N T + YA K + K+ + E + +E+QI + P +V
Sbjct: 21 RAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQI-MQGLEHPFLVN 79
Query: 89 FKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHR 148
+++DE + +V++L GGDL + + E + +V A++ + ++HR
Sbjct: 80 LWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFICELVMALDYLQNQRIIHR 139
Query: 149 DLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLRRR----YGK 204
D+KP+N I D++ + +TDF A + + G+ Y+APE+ R Y
Sbjct: 140 DMKPDN---ILLDEHGHVHITDFNIAAMLPRETQITTMAGTKPYMAPEMFSSRKGAGYSF 196
Query: 205 EIDIWSAGVILYILLSGVPPFW---AETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVR 261
+D WS GV Y LL G P+ + + K + + P + S L++
Sbjct: 197 AVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFETTVVTY---P-SAWSQEMVSLLK 252
Query: 262 RMLTKDPKRRI-TAAQVLEHPWLRE 285
++L +P +R + V P++ +
Sbjct: 253 KLLEPNPDQRFSQLSDVQNFPYMND 277
|
| >3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332 | Back alignment and structure |
|---|
Score = 163 bits (415), Expect = 1e-46
Identities = 55/263 (20%), Positives = 95/263 (36%), Gaps = 26/263 (9%)
Query: 39 SYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETA 98
+ + + P + D +I+ + N V +
Sbjct: 77 PPEKWQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRR-MDPFSTKNTVGQLQPSSPKVY 135
Query: 99 VHVVMELCEGGDLFDRIIAKGYNSERDAATVLRA---IVNAVNVCHSMGVMHRDLKPENF 155
+++ M+LC +L D + + +R+ L I AV HS G+MHRDLKP N
Sbjct: 136 LYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSKGLMHRDLKPSNI 195
Query: 156 SFISRDDNALLKVTDFGSA-------------LLFEEGQVYRDIVGSGFYIAPEVLR-RR 201
F + DD +KV DFG + VG+ Y++PE +
Sbjct: 196 -FFTMDDV--VKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLYMSPEQIHGNN 252
Query: 202 YGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVR 261
Y ++DI+S G+IL+ LL + + + + +V+
Sbjct: 253 YSHKVDIFSLGLILFELL--YSFSTQMERVRIITDVRNLKFP---LLFTQKYPQEHMMVQ 307
Query: 262 RMLTKDPKRRITAAQVLEHPWLR 284
ML+ P R A ++E+
Sbjct: 308 DMLSPSPTERPEATDIIENAIFE 330
|
| >3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332 | Back alignment and structure |
|---|
Score = 46.0 bits (109), Expect = 2e-05
Identities = 15/75 (20%), Positives = 31/75 (41%), Gaps = 3/75 (4%)
Query: 22 MLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLS 81
+ + + +GRG FGV + + YA K I + + + RE++ L
Sbjct: 5 LTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNREL--AREKVMREVKALAKLE 62
Query: 82 GQPNVVEFKSTYEDE 96
P +V + + + +
Sbjct: 63 -HPGIVRYFNAWLET 76
|
| >2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* Length = 576 | Back alignment and structure |
|---|
Score = 168 bits (427), Expect = 2e-46
Identities = 85/269 (31%), Positives = 131/269 (48%), Gaps = 20/269 (7%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVE 88
R+LG+G FG C +T + YACK + KK + M E QI L VV
Sbjct: 190 RVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQI-LEKVNSRFVVS 248
Query: 89 FKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVC------HS 142
YE + A+ +V+ L GGDL I Y+ + RA+ A +C H
Sbjct: 249 LAYAYETKDALCLVLTLMNGGDLKFHI----YHMGQAGFPEARAVFYAAEICCGLEDLHR 304
Query: 143 MGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLRR-R 201
+++RDLKPEN I DD+ ++++D G A+ EGQ + VG+ Y+APEV++ R
Sbjct: 305 ERIVYRDLKPEN---ILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNER 361
Query: 202 YGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVR 261
Y D W+ G +LY +++G PF KK + + + + + S A+ L
Sbjct: 362 YTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEEYSERFSPQARSLCS 421
Query: 262 RMLTKDPKRRI-----TAAQVLEHPWLRE 285
++L KDP R+ +A +V EHP ++
Sbjct: 422 QLLCKDPAERLGCRGGSAREVKEHPLFKK 450
|
| >1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* Length = 345 | Back alignment and structure |
|---|
Score = 159 bits (405), Expect = 5e-45
Identities = 71/264 (26%), Positives = 124/264 (46%), Gaps = 18/264 (6%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVE 88
+MLG+G FG +L TN+ +A K++ K + + + E ++ P +
Sbjct: 23 KMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTH 82
Query: 89 FKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHR 148
T++ + + VME GGDL I + A I+ + HS G+++R
Sbjct: 83 MFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYR 142
Query: 149 DLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGF-----YIAPEVLRRR-Y 202
DLK +N I D + +K+ DFG + +E + + F YIAPE+L + Y
Sbjct: 143 DLKLDN---ILLDKDGHIKIADFG---MCKENMLGDAKTNT-FCGTPDYIAPEILLGQKY 195
Query: 203 GKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRR 262
+D WS GV+LY +L G PF + ++ + +I + P + AKDL+ +
Sbjct: 196 NHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFY---P-RWLEKEAKDLLVK 251
Query: 263 MLTKDPKRRITAAQ-VLEHPWLRE 285
+ ++P++R+ + +HP RE
Sbjct: 252 LFVREPEKRLGVRGDIRQHPLFRE 275
|
| >3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B Length = 543 | Back alignment and structure |
|---|
Score = 163 bits (414), Expect = 1e-44
Identities = 72/281 (25%), Positives = 126/281 (44%), Gaps = 24/281 (8%)
Query: 21 VMLHYF-FGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLY 79
+ +F R+LGRG FG + C +T + YACK + KK + E +I L
Sbjct: 182 MGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKI-LA 240
Query: 80 LSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSER---DAATVLRA-IVN 135
+V +E +T + +VM + GGD+ I ++ A A IV+
Sbjct: 241 KVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVS 300
Query: 136 AVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLF-EEGQVYRDIVGSGFYIA 194
+ H +++RDLKPEN + DD+ ++++D G A+ + G+ ++A
Sbjct: 301 GLEHLHQRNIIYRDLKPEN---VLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMA 357
Query: 195 PEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKGT----YDAILQGEIDFDTDPW 249
PE+L Y +D ++ GV LY +++ PF A +K +L+ + +
Sbjct: 358 PELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYP---- 413
Query: 250 PSISSTAKDLVRRMLTKDPKRRI-----TAAQVLEHPWLRE 285
S +KD +L KDP++R+ + + HP R+
Sbjct: 414 DKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRD 454
|
| >3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 158 bits (401), Expect = 2e-44
Identities = 81/297 (27%), Positives = 132/297 (44%), Gaps = 24/297 (8%)
Query: 2 GCSVSKNQRDPILGKAYEDVMLHYF-FGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKP 60
G S + + I + + + F F R+LG+G FG L T YA K + K
Sbjct: 1 GPKESSKEGNGIGVNSSNRLGIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDV 60
Query: 61 KMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGY 120
++ + + E +I P + + ++ + VME GGDL I
Sbjct: 61 ILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRR 120
Query: 121 NSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEG 180
E A I++A+ H G+++RDLK +N + D K+ DFG + +EG
Sbjct: 121 FDEARARFYAAEIISALMFLHDKGIIYRDLKLDN---VLLDHEGHCKLADFG---MCKEG 174
Query: 181 QVYRDIVGSGF-----YIAPEVLRRR-YGKEIDIWSAGVILYILLSGVPPFWAETKKGTY 234
+ F YIAPE+L+ YG +D W+ GV+LY +L G PF AE + +
Sbjct: 175 ICNGVTTAT-FCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLF 233
Query: 235 DAILQGEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRI------TAAQVLEHPWLRE 285
+AIL E+ + P + A +++ +TK+P R+ +L HP+ +E
Sbjct: 234 EAILNDEVVY---P-TWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILRHPFFKE 286
|
| >3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* Length = 327 | Back alignment and structure |
|---|
Score = 156 bits (398), Expect = 3e-44
Identities = 78/270 (28%), Positives = 136/270 (50%), Gaps = 23/270 (8%)
Query: 29 RMLGRGQFGVSYLC---TENSTNRPYACKSIAKK---PKMRLAENDMIRREIQIRLYLSG 82
R+LG+G +G + T +T + +A K + K + + R I L
Sbjct: 23 RVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNI---LEEVK 79
Query: 83 QPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHS 142
P +V+ ++ +++++E GG+LF ++ +G E A L I A+ H
Sbjct: 80 HPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQ 139
Query: 143 MGVMHRDLKPENFSFISRDDNALLKVTDFG-SALLFEEGQVYRDIVGSGFYIAPEVLRRR 201
G+++RDLKPEN I + +K+TDFG +G V G+ Y+APE+L R
Sbjct: 140 KGIIYRDLKPEN---IMLNHQGHVKLTDFGLCKESIHDGTVTHTFCGTIEYMAPEILMRS 196
Query: 202 -YGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLV 260
+ + +D WS G ++Y +L+G PPF E +K T D IL+ +++ P P ++ A+DL+
Sbjct: 197 GHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNL---P-PYLTQEARDLL 252
Query: 261 RRMLTKDPKRRI-----TAAQVLEHPWLRE 285
+++L ++ R+ A +V HP+ R
Sbjct: 253 KKLLKRNAASRLGAGPGDAGEVQAHPFFRH 282
|
| >3k21_A PFCDPK3, calcium-dependent protein kinase 3; calcium kinase structural genomics malaria, structural genom consortium, SGC, ATP-binding; 1.15A {Plasmodium falciparum} PDB: 3o4y_A Length = 191 | Back alignment and structure |
|---|
Score = 152 bits (386), Expect = 5e-44
Identities = 42/190 (22%), Positives = 80/190 (42%), Gaps = 16/190 (8%)
Query: 278 LEHPWLRESGEASD---DTSVILRMKQFRRMNKLKKLTIKVIVEYLPDEETQALKEKFIE 334
+ H SG + V+ K + + K +KL + +I + D + + LK F+
Sbjct: 1 MHHHHHHSSGRENLYFQGIHVLENFKNYGLLLKFQKLAMTIIAQQSNDYDVEKLKSTFLV 60
Query: 335 MDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAV--KNSSTLE-----SLCENLPTK 387
+D D G ++ ++L+ GL K G L + L++ + S ++ + +
Sbjct: 61 LDEDGKGYITKEQLKKGLEKDGLKLPY-NFDLLLDQIDSDGSGKIDYTEFIAAALDRKQL 119
Query: 388 EKQKLMEKFREMDTDNSDTLTLSELKAGLAKLG-----SALEESEVNQYMEAGDIDGNGN 442
K+ + FR D DN +T +EL L + + + V + + D + +G
Sbjct: 120 SKKLIYCAFRVFDVDNDGEITTAELAHILYNGNKKGNITQRDVNRVKRMIRDVDKNNDGK 179
Query: 443 IDSIEFVNLM 452
ID EF +M
Sbjct: 180 IDFHEFSEMM 189
|
| >3k21_A PFCDPK3, calcium-dependent protein kinase 3; calcium kinase structural genomics malaria, structural genom consortium, SGC, ATP-binding; 1.15A {Plasmodium falciparum} PDB: 3o4y_A Length = 191 | Back alignment and structure |
|---|
Score = 96.5 bits (241), Expect = 2e-23
Identities = 28/95 (29%), Positives = 45/95 (47%), Gaps = 2/95 (2%)
Query: 382 ENLPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNG 441
+ + +KL F +D D +T +LK GL K G L + ++ D DG+G
Sbjct: 44 QQSNDYDVEKLKSTFLVLDEDGKGYITKEQLKKGLEKDGLKLPY-NFDLLLDQIDSDGSG 102
Query: 442 NIDSIEFVNLMTDIYKLETPELLEKAFQYLDKNSD 476
ID EF+ D +L +L+ AF+ D ++D
Sbjct: 103 KIDYTEFIAAALDRKQLSK-KLIYCAFRVFDVDND 136
|
| >3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A Length = 674 | Back alignment and structure |
|---|
Score = 163 bits (413), Expect = 5e-44
Identities = 71/268 (26%), Positives = 122/268 (45%), Gaps = 22/268 (8%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVE 88
+LG+G FG L T+ YA K + K ++ + + E ++ P + +
Sbjct: 347 MVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQ 406
Query: 89 FKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHR 148
S ++ ++ VME GGDL I G E A I + S G+++R
Sbjct: 407 LHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYR 466
Query: 149 DLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGF-----YIAPEVLRRR-Y 202
DLK +N + D +K+ DFG + +E + F YIAPE++ + Y
Sbjct: 467 DLKLDN---VMLDSEGHIKIADFG---MCKENIWDGVTTKT-FCGTPDYIAPEIIAYQPY 519
Query: 203 GKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRR 262
GK +D W+ GV+LY +L+G PF E + + +I++ + + P S+S A + +
Sbjct: 520 GKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAY---P-KSMSKEAVAICKG 575
Query: 263 MLTKDPKRRI-----TAAQVLEHPWLRE 285
++TK P +R+ + EH + R
Sbjct: 576 LMTKHPGKRLGCGPEGERDIKEHAFFRY 603
|
| >4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336 | Back alignment and structure |
|---|
Score = 156 bits (396), Expect = 7e-44
Identities = 63/289 (21%), Positives = 112/289 (38%), Gaps = 21/289 (7%)
Query: 4 SVSKNQRDPILGKAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMR 63
V ++ + Y + + +GRG FG + + T A K K+R
Sbjct: 39 GVLLTEKLKPVDYEYREEVHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVK------KVR 92
Query: 64 LAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSE 123
L E+ LS P +V + V++ MEL EGG L I G E
Sbjct: 93 L--EVFRVEELVACAGLS-SPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPE 149
Query: 124 RDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDN-ALLKVTDFGSALLFEEGQV 182
A L + + H+ ++H D+K +N + + + + DFG AL + +
Sbjct: 150 DRALYYLGQALEGLEYLHTRRILHGDVKADN---VLLSSDGSRAALCDFGHALCLQPDGL 206
Query: 183 YR------DIVGSGFYIAPEVLRRR-YGKEIDIWSAGVILYILLSGVPPFWAETKKGTYD 235
+ I G+ ++APEV+ + ++DIWS+ ++ +L+G P+ +
Sbjct: 207 GKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCL 266
Query: 236 AILQGEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLR 284
I P PS + ++ L K+P R +A ++
Sbjct: 267 KIASEPPPIREIP-PSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKA 314
|
| >2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* Length = 353 | Back alignment and structure |
|---|
Score = 157 bits (398), Expect = 7e-44
Identities = 71/264 (26%), Positives = 122/264 (46%), Gaps = 14/264 (5%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVE 88
+LG+G FG L T+ YA K + K ++ + + E ++ P + +
Sbjct: 26 MVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQ 85
Query: 89 FKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHR 148
S ++ ++ VME GGDL I G E A I + S G+++R
Sbjct: 86 LHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYR 145
Query: 149 DLKPENFSFISRDDNALLKVTDFG-SALLFEEGQVYRDIVGSGFYIAPEVLRRR-YGKEI 206
DLK +N + D +K+ DFG +G + G+ YIAPE++ + YGK +
Sbjct: 146 DLKLDN---VMLDSEGHIKIADFGMCKENIWDGVTTKTFCGTPDYIAPEIIAYQPYGKSV 202
Query: 207 DIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTK 266
D W+ GV+LY +L+G PF E + + +I++ + + P S+S A + + ++TK
Sbjct: 203 DWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAY---P-KSMSKEAVAICKGLMTK 258
Query: 267 DPKRRI-----TAAQVLEHPWLRE 285
P +R+ + EH + R
Sbjct: 259 HPGKRLGCGPEGERDIKEHAFFRY 282
|
| >3pm8_A PFCDPK2, calcium-dependent protein kinase 2; malaria, structural genomics, structural genomics CONS SGC; 2.00A {Plasmodium falciparum K1} Length = 197 | Back alignment and structure |
|---|
Score = 151 bits (385), Expect = 9e-44
Identities = 46/192 (23%), Positives = 92/192 (47%), Gaps = 14/192 (7%)
Query: 276 QVLEHPWLRE-SGEASD---DTSVILRMKQFRRMNKLKKLTIKVIVEYLPDEETQALKEK 331
H RE ++++ +K F++ N+LKK+ + +I ++L D E L+
Sbjct: 3 HHHHHSSGRENLYFQGHVELSSTLLKNLKNFKKENELKKIALTIIAKHLCDVEINNLRNI 62
Query: 332 FIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAV--KNSSTLE-----SLCENL 384
FI +D D +GTLS E+ GL K+G D+ ++ + S + + +
Sbjct: 63 FIALDVDNSGTLSSQEILDGLKKIGYQKIPPDIHQVLRDIDSNASGQIHYTDFLAATIDK 122
Query: 385 PTKE-KQKLMEKFREMDTDNSDTLTLSELKAGLAK--LGSALEESEVNQYMEAGDIDGNG 441
T K+ + F+ D D + +++ ELK + + + L + ++ ++ D++G+G
Sbjct: 123 QTYLKKEVCLIPFKFFDIDGNGKISVEELKRIFGRDDIENPLIDKAIDSLLQEVDLNGDG 182
Query: 442 NIDSIEFVNLMT 453
ID EF+ +M+
Sbjct: 183 EIDFHEFMLMMS 194
|
| >3pm8_A PFCDPK2, calcium-dependent protein kinase 2; malaria, structural genomics, structural genomics CONS SGC; 2.00A {Plasmodium falciparum K1} Length = 197 | Back alignment and structure |
|---|
Score = 108 bits (273), Expect = 9e-28
Identities = 24/95 (25%), Positives = 43/95 (45%)
Query: 382 ENLPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNG 441
++L E L F +D DNS TL+ E+ GL K+G +++Q + D + +G
Sbjct: 49 KHLCDVEINNLRNIFIALDVDNSGTLSSQEILDGLKKIGYQKIPPDIHQVLRDIDSNASG 108
Query: 442 NIDSIEFVNLMTDIYKLETPELLEKAFQYLDKNSD 476
I +F+ D E+ F++ D + +
Sbjct: 109 QIHYTDFLAATIDKQTYLKKEVCLIPFKFFDIDGN 143
|
| >2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321 | Back alignment and structure |
|---|
Score = 155 bits (393), Expect = 1e-43
Identities = 77/284 (27%), Positives = 142/284 (50%), Gaps = 29/284 (10%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFK 90
+G G G+ L E + R A K + + + R +++ E+ I + NVVE
Sbjct: 53 IGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRR---ELLFNEVVI-MRDYQHFNVVEMY 108
Query: 91 STYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDL 150
+Y + V+ME +GG L D I+++ +E ATV A++ A+ H+ GV+HRD+
Sbjct: 109 KSYLVGEELWVLMEFLQGGALTD-IVSQVRLNEEQIATVCEAVLQALAYLHAQGVIHRDI 167
Query: 151 KPENFSFISRDDNALLKVTDFG-SALLFEEGQVYRDIVGSGFYIAPEVLRRR-YGKEIDI 208
K ++ I + +K++DFG A + ++ + +VG+ +++APEV+ R Y E+DI
Sbjct: 168 KSDS---ILLTLDGRVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRSLYATEVDI 224
Query: 209 WSAGVILYILLSGVPPFWAE---------TKKGTYDAILQGEIDFDTDPWPSISSTAKDL 259
WS G+++ ++ G PP++++ L+ S +D
Sbjct: 225 WSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPP--PKLKNSHKV--------SPVLRDF 274
Query: 260 VRRMLTKDPKRRITAAQVLEHPWLRESGEASDDTSVILRMKQFR 303
+ RML +DP+ R TA ++L+HP+L ++G +I ++
Sbjct: 275 LERMLVRDPQERATAQELLDHPFLLQTGLPECLVPLIQLYRKQT 318
|
| >3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297 | Back alignment and structure |
|---|
Score = 154 bits (390), Expect = 2e-43
Identities = 79/287 (27%), Positives = 139/287 (48%), Gaps = 29/287 (10%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFK 90
+G+G G Y + +T + A + + + + + ++I EI + + + PN+V +
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKK---ELIINEILV-MRENKNPNIVNYL 83
Query: 91 STYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDL 150
+Y + VVME GG L D ++ + E A V R + A+ HS V+HRD+
Sbjct: 84 DSYLVGDELWVVMEYLAGGSLTD-VVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDI 142
Query: 151 KPENFSFISRDDNALLKVTDFG-SALLFEEGQVYRDIVGSGFYIAPEVLRRR-YGKEIDI 208
K +N I + +K+TDFG A + E +VG+ +++APEV+ R+ YG ++DI
Sbjct: 143 KSDN---ILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDI 199
Query: 209 WSAGVILYILLSGVPPFWAE---------TKKGTYDAILQGEIDFDTDPWPSISSTAKDL 259
WS G++ ++ G PP+ E GT LQ S+ +D
Sbjct: 200 WSLGIMAIEMIEGEPPYLNENPLRALYLIATNGT--PELQNPEKL--------SAIFRDF 249
Query: 260 VRRMLTKDPKRRITAAQVLEHPWLRESGEASDDTSVILRMKQFRRMN 306
+ R L D ++R +A ++L+H +L+ + S T +I K+ + N
Sbjct: 250 LNRCLEMDVEKRGSAKELLQHQFLKIAKPLSSLTPLIAAAKEATKNN 296
|
| >2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* Length = 373 | Back alignment and structure |
|---|
Score = 155 bits (395), Expect = 3e-43
Identities = 72/262 (27%), Positives = 124/262 (47%), Gaps = 13/262 (4%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVE 88
+++G+G FG L + YA K + KK ++ E I E + L P +V
Sbjct: 44 KVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVG 103
Query: 89 FKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHR 148
+++ ++ V++ GG+LF + + E A I +A+ HS+ +++R
Sbjct: 104 LHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYR 163
Query: 149 DLKPENFSFISRDDNALLKVTDFG-SALLFEEGQVYRDIVGSGFYIAPEVLRRR-YGKEI 206
DLKPEN I D + +TDFG E G+ Y+APEVL ++ Y + +
Sbjct: 164 DLKPEN---ILLDSQGHIVLTDFGLCKENIEHNSTTSTFCGTPEYLAPEVLHKQPYDRTV 220
Query: 207 DIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTK 266
D W G +LY +L G+PPF++ YD IL + P+I+++A+ L+ +L K
Sbjct: 221 DWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQL---K-PNITNSARHLLEGLLQK 276
Query: 267 DPKRRI----TAAQVLEHPWLR 284
D +R+ ++ H +
Sbjct: 277 DRTKRLGAKDDFMEIKSHVFFS 298
|
| >1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... Length = 337 | Back alignment and structure |
|---|
Score = 154 bits (391), Expect = 4e-43
Identities = 82/264 (31%), Positives = 133/264 (50%), Gaps = 15/264 (5%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVE 88
++LG+G FG L E +T R YA K + K+ + E E ++ L + P +
Sbjct: 11 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRV-LQNTRHPFLTA 69
Query: 89 FKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHR 148
K ++ + VME GG+LF + + +E A IV+A+ HS V++R
Sbjct: 70 LKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYR 129
Query: 149 DLKPENFSFISRDDNALLKVTDFG-SALLFEEGQVYRDIVGSGFYIAPEVLRRR-YGKEI 206
D+K EN + D + +K+TDFG +G + G+ Y+APEVL YG+ +
Sbjct: 130 DIKLEN---LMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAV 186
Query: 207 DIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTK 266
D W GV++Y ++ G PF+ + + ++ IL EI F P ++S AK L+ +L K
Sbjct: 187 DWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRF---P-RTLSPEAKSLLAGLLKK 242
Query: 267 DPKRRI-----TAAQVLEHPWLRE 285
DPK+R+ A +V+EH +
Sbjct: 243 DPKQRLGGGPSDAKEVMEHRFFLS 266
|
| >3g51_A Ribosomal protein S6 kinase alpha-3; N-terminal kinase domain of P90 ribosomal S6 kinase 2, ATP- binding, nucleotide-binding, phosphoprotein; HET: ANP; 1.80A {Mus musculus} PDB: 2z7q_A* 2z7r_A* 2z7s_A* Length = 325 | Back alignment and structure |
|---|
Score = 152 bits (386), Expect = 2e-42
Identities = 76/271 (28%), Positives = 136/271 (50%), Gaps = 27/271 (9%)
Query: 29 RMLGRGQFGVSYLC---TENSTNRPYACKSIAKKPKMRLAENDMIR----REIQIRLYLS 81
++LG+G FG +L + + + YA K + K L D +R R+I L
Sbjct: 30 KVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKA---TLKVRDRVRTKMERDI---LVEV 83
Query: 82 GQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCH 141
P +V+ ++ E ++++++ GGDLF R+ + +E D L + A++ H
Sbjct: 84 NHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLH 143
Query: 142 SMGVMHRDLKPENFSFISRDDNALLKVTDFG-SALLFEEGQVYRDIVGSGFYIAPEVLRR 200
S+G+++RDLKPEN I D+ +K+TDFG S + + G+ Y+APEV+ R
Sbjct: 144 SLGIIYRDLKPEN---ILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNR 200
Query: 201 R-YGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDL 259
R + + D WS GV+++ +L+G PF + +K T IL+ ++ P +S A+ L
Sbjct: 201 RGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGM---P-QFLSPEAQSL 256
Query: 260 VRRMLTKDPKRRI-----TAAQVLEHPWLRE 285
+R + ++P R+ ++ H +
Sbjct: 257 LRMLFKRNPANRLGAGPDGVEEIKRHSFFST 287
|
| >4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* Length = 446 | Back alignment and structure |
|---|
Score = 154 bits (392), Expect = 3e-42
Identities = 82/264 (31%), Positives = 135/264 (51%), Gaps = 16/264 (6%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVE 88
++LG+G FG L E +T R YA K + K+ + E E ++ L S P +
Sbjct: 154 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRV-LQNSRHPFLTA 212
Query: 89 FKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHS-MGVMH 147
K +++ + VME GG+LF + + SE A IV+A++ HS V++
Sbjct: 213 LKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVY 272
Query: 148 RDLKPENFSFISRDDNALLKVTDFG-SALLFEEGQVYRDIVGSGFYIAPEVLRRR-YGKE 205
RDLK EN + D + +K+TDFG ++G + G+ Y+APEVL YG+
Sbjct: 273 RDLKLEN---LMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDYGRA 329
Query: 206 IDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLT 265
+D W GV++Y ++ G PF+ + + ++ IL EI F P ++ AK L+ +L
Sbjct: 330 VDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRF---P-RTLGPEAKSLLSGLLK 385
Query: 266 KDPKRRI-----TAAQVLEHPWLR 284
KDPK+R+ A ++++H +
Sbjct: 386 KDPKQRLGGGSEDAKEIMQHRFFA 409
|
| >3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* Length = 345 | Back alignment and structure |
|---|
Score = 151 bits (383), Expect = 7e-42
Identities = 79/278 (28%), Positives = 129/278 (46%), Gaps = 32/278 (11%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVE 88
R++GRG + L T+R YA K + K+ + D ++ E + S P +V
Sbjct: 15 RVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVG 74
Query: 89 FKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHR 148
S ++ E+ + V+E GGDL + + E A I A+N H G+++R
Sbjct: 75 LHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYR 134
Query: 149 DLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGF-----YIAPEVLRRR-Y 202
DLK +N + D +K+TD+G + +EG D + F YIAPE+LR Y
Sbjct: 135 DLKLDN---VLLDSEGHIKLTDYG---MCKEGLRPGDTTST-FCGTPNYIAPEILRGEDY 187
Query: 203 GKEIDIWSAGVILYILLSGVPPFW---------AETKKGTYDAILQGEIDFDTDPWPSIS 253
G +D W+ GV+++ +++G PF T+ + IL+ +I P S+S
Sbjct: 188 GFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRI---P-RSLS 243
Query: 254 STAKDLVRRMLTKDPKRRI------TAAQVLEHPWLRE 285
A +++ L KDPK R+ A + HP+ R
Sbjct: 244 VKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRN 281
|
| >2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295 | Back alignment and structure |
|---|
Score = 149 bits (378), Expect = 1e-41
Identities = 63/272 (23%), Positives = 119/272 (43%), Gaps = 22/272 (8%)
Query: 28 GRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVV 87
+LG+G +G+ Y + S A K I ++ + EI + +L N+V
Sbjct: 27 RVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQP---LHEEIALHKHLK-HKNIV 82
Query: 88 EFKSTYEDETAVHVVMELCEGG---DLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMG 144
++ ++ + + + ME GG L ++E+ + I+ + H
Sbjct: 83 QYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQ 142
Query: 145 VMHRDLKPENFSFISRDD-NALLKVTDFG-SALLFEEGQVYRDIVGSGFYIAPEVLRRR- 201
++HRD+K +N + + + +LK++DFG S L G+ Y+APE++ +
Sbjct: 143 IVHRDIKGDN---VLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGP 199
Query: 202 --YGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWP---SISSTA 256
YGK DIWS G + + +G PP + E + A+ + + S+S+ A
Sbjct: 200 RGYGKAADIWSLGCTIIEMATGKPP-FYELGEP-QAAMFK--VGMFKVHPEIPESMSAEA 255
Query: 257 KDLVRRMLTKDPKRRITAAQVLEHPWLRESGE 288
K + + DP +R A +L +L+ S +
Sbjct: 256 KAFILKCFEPDPDKRACANDLLVDEFLKVSSK 287
|
| >4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} Length = 396 | Back alignment and structure |
|---|
Score = 150 bits (381), Expect = 4e-41
Identities = 78/278 (28%), Positives = 129/278 (46%), Gaps = 32/278 (11%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVE 88
R++GRG + L T+R YA + + K+ + D ++ E + S P +V
Sbjct: 58 RVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVG 117
Query: 89 FKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHR 148
S ++ E+ + V+E GGDL + + E A I A+N H G+++R
Sbjct: 118 LHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYR 177
Query: 149 DLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGF-----YIAPEVLRRR-Y 202
DLK +N + D +K+TD+G + +EG D + F YIAPE+LR Y
Sbjct: 178 DLKLDN---VLLDSEGHIKLTDYG---MCKEGLRPGDTTST-FCGTPNYIAPEILRGEDY 230
Query: 203 GKEIDIWSAGVILYILLSGVPPFW---------AETKKGTYDAILQGEIDFDTDPWPSIS 253
G +D W+ GV+++ +++G PF T+ + IL+ +I P S+S
Sbjct: 231 GFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRI---P-RSLS 286
Query: 254 STAKDLVRRMLTKDPKRRI------TAAQVLEHPWLRE 285
A +++ L KDPK R+ A + HP+ R
Sbjct: 287 VKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRN 324
|
| >1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 Length = 355 | Back alignment and structure |
|---|
Score = 148 bits (376), Expect = 9e-41
Identities = 80/277 (28%), Positives = 146/277 (52%), Gaps = 29/277 (10%)
Query: 29 RMLGRGQFGVSYLC---TENSTNRPYACKSIAKK---PKMRLAENDMIRREIQIRLYLSG 82
++LG G +G +L + + T + YA K + K K + E+ R Q+ ++
Sbjct: 60 KVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTER--QVLEHIRQ 117
Query: 83 QPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHS 142
P +V ++ ET +H++++ GG+LF + + +E + + IV A+ H
Sbjct: 118 SPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHK 177
Query: 143 MGVMHRDLKPENFSFISRDDNALLKVTDFGSA--LLFEEGQVYRDIVGSGFYIAPEVLRR 200
+G+++RD+K EN I D N + +TDFG + + +E + D G+ Y+AP+++R
Sbjct: 178 LGIIYRDIKLEN---ILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRG 234
Query: 201 R---YGKEIDIWSAGVILYILLSGVPPFWAETKKGT----YDAILQGEIDFDTDPWPSIS 253
+ K +D WS GV++Y LL+G PF + +K + IL+ E + P +S
Sbjct: 235 GDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPY---P-QEMS 290
Query: 254 STAKDLVRRMLTKDPKRRI-----TAAQVLEHPWLRE 285
+ AKDL++R+L KDPK+R+ A ++ EH + ++
Sbjct: 291 ALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQK 327
|
| >3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314 | Back alignment and structure |
|---|
Score = 147 bits (372), Expect = 1e-40
Identities = 72/305 (23%), Positives = 128/305 (41%), Gaps = 33/305 (10%)
Query: 19 EDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAEN-DMIRREIQIR 77
+ + LG G +G Y T + A K ++ + + I +EI I
Sbjct: 25 KQPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIK------QVPVESDLQEIIKEISI- 77
Query: 78 LYLSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRI-IAKGYNSERDAATVLRAIVNA 136
+ P+VV++ +Y T + +VME C G + D I + +E + AT+L++ +
Sbjct: 78 MQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKG 137
Query: 137 VNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFG-SALLFEEGQVYRDIVGSGFYIAP 195
+ H M +HRD+K N I + K+ DFG + L + ++G+ F++AP
Sbjct: 138 LEYLHFMRKIHRDIKAGN---ILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAP 194
Query: 196 EVLRRR-YGKEIDIWSAGVILYILLSGVPPFWAE---------TKKGTYDAILQGEIDFD 245
EV++ Y DIWS G+ + G PP+ + +
Sbjct: 195 EVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIFMIPTNPP--PTFRKPELW- 251
Query: 246 TDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASDDTSVILRMKQFRRM 305
S D V++ L K P++R TA Q+L+HP++R + S +I +
Sbjct: 252 -------SDNFTDFVKQCLVKSPEQRATATQLLQHPFVRSAKGVSILRDLINEAMDVKLK 304
Query: 306 NKLKK 310
+ +
Sbjct: 305 RQESQ 309
|
| >2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303 | Back alignment and structure |
|---|
Score = 145 bits (367), Expect = 5e-40
Identities = 69/282 (24%), Positives = 121/282 (42%), Gaps = 40/282 (14%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDM--IRREIQIRLYLSGQPNVVE 88
+G G V A K I + + M + +EIQ + PN+V
Sbjct: 23 IGSGATAVVQAAYCAPKKEKVAIKRI----NLEKCQTSMDELLKEIQA-MSQCHHPNIVS 77
Query: 89 FKSTYEDETAVHVVMELCEGGDLFDRIIAKGYN---------SERDAATVLRAIVNAVNV 139
+ +++ + + +VM+L GG + D II E AT+LR ++ +
Sbjct: 78 YYTSFVVKDELWLVMKLLSGGSVLD-IIKHIVAKGEHKSGVLDESTIATILREVLEGLEY 136
Query: 140 CHSMGVMHRDLKPENFSFISRDDNALLKVTDFG-SALLFEEGQVYRD-----IVGSGFYI 193
H G +HRD+K N I ++ +++ DFG SA L G + R+ VG+ ++
Sbjct: 137 LHKNGQIHRDVKAGN---ILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWM 193
Query: 194 APEVLRRR--YGKEIDIWSAGVILYILLSGVPPFWAE---------TKKGTYDAILQGEI 242
APEV+ + Y + DIWS G+ L +G P+ + L+ +
Sbjct: 194 APEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPS--LETGV 251
Query: 243 DFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLR 284
D + + + ++ L KDP++R TAA++L H + +
Sbjct: 252 Q-DKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFFQ 292
|
| >3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303 | Back alignment and structure |
|---|
Score = 143 bits (363), Expect = 2e-39
Identities = 81/299 (27%), Positives = 139/299 (46%), Gaps = 35/299 (11%)
Query: 19 EDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDM--IRREIQI 76
D + +G+G FG + +N T + A K I + AE+++ I++EI +
Sbjct: 18 ADPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKII----DLEEAEDEIEDIQQEITV 73
Query: 77 RLYLSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNA 136
L P V ++ +Y +T + ++ME GG D ++ G E AT+LR I+
Sbjct: 74 -LSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALD-LLEPGPLDETQIATILREILKG 131
Query: 137 VNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFG-SALLFEEGQVYRDIVGSGFYIAP 195
++ HS +HRD+K N + ++ +K+ DFG + L + VG+ F++AP
Sbjct: 132 LDYLHSEKKIHRDIKAAN---VLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAP 188
Query: 196 EVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAE---------TKKGTYDAILQGEIDFD 245
EV+++ Y + DIWS G+ L G PP K L+G
Sbjct: 189 EVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNP--PTLEG----- 241
Query: 246 TDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWL-RESGEASDDTSVILRMKQFR 303
+ S K+ V L K+P R TA ++L+H ++ R + + S T +I R K+++
Sbjct: 242 --NY---SKPLKEFVEACLNKEPSFRPTAKELLKHKFILRNAKKTSYLTELIDRYKRWK 295
|
| >4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} Length = 311 | Back alignment and structure |
|---|
Score = 143 bits (364), Expect = 2e-39
Identities = 81/307 (26%), Positives = 130/307 (42%), Gaps = 47/307 (15%)
Query: 21 VMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLA-ENDMIR----REIQ 75
+M Y +G G +GV + C T + A K K + ++ +I+ REI+
Sbjct: 1 MMEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIK------KFLESEDDPVIKKIALREIR 54
Query: 76 IRLYLSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYN-SERDAATVLRAIV 134
+ L PN+V + + +H+V E C+ + + E ++ +
Sbjct: 55 MLKQLK-HPNLVNLLEVFRRKRRLHLVFEYCDH-TVLHELDRYQRGVPEHLVKSITWQTL 112
Query: 135 NAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLF-EEGQVYRDIVGSGFYI 193
AVN CH +HRD+KPEN I++ +K+ DFG A L Y D V + +Y
Sbjct: 113 QAVNFCHKHNCIHRDVKPENI-LITKHSV--IKLCDFGFARLLTGPSDYYDDEVATRWYR 169
Query: 194 APEVL--RRRYGKEIDIWSAGVILYILLSGVPPFWAETKK----------GT-YDAILQG 240
+PE+L +YG +D+W+ G + LLSGVP + ++ G Q
Sbjct: 170 SPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQV 229
Query: 241 --------EIDF----DTDPW----PSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLR 284
+ D +P P+IS A L++ L DP R+T Q+L HP+
Sbjct: 230 FSTNQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHHPYFE 289
Query: 285 ESGEASD 291
E D
Sbjct: 290 NIREIED 296
|
| >1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290 | Back alignment and structure |
|---|
Score = 142 bits (360), Expect = 3e-39
Identities = 53/266 (19%), Positives = 110/266 (41%), Gaps = 14/266 (5%)
Query: 27 FGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNV 86
F +GRG F Y + T A + + + +E + E ++ L PN+
Sbjct: 30 FDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTK-SERQRFKEEAEMLKGLQ-HPNI 87
Query: 87 VEF----KSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHS 142
V F +ST + + + +V EL G L + + + R I+ + H+
Sbjct: 88 VRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHT 147
Query: 143 MG--VMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLRR 200
++HRDLK +N FI+ +K+ D G A L + ++G+ ++APE+
Sbjct: 148 RTPPIIHRDLKCDNI-FITGP-TGSVKIGDLGLATLKRASFA-KAVIGTPEFMAPEMYEE 204
Query: 201 RYGKEIDIWSAGVILYILLSGVPPFWA-ETKKGTYDAILQGEIDFDTDPWPSISSTAKDL 259
+Y + +D+++ G+ + + + P+ + Y + G K++
Sbjct: 205 KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKP--ASFDKVAIPEVKEI 262
Query: 260 VRRMLTKDPKRRITAAQVLEHPWLRE 285
+ + ++ R + +L H + +E
Sbjct: 263 IEGCIRQNKDERYSIKDLLNHAFFQE 288
|
| >2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302 | Back alignment and structure |
|---|
Score = 142 bits (359), Expect = 6e-39
Identities = 74/303 (24%), Positives = 118/303 (38%), Gaps = 34/303 (11%)
Query: 19 EDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRL 78
D + LG G FG Y T A K I K + L + EI+I L
Sbjct: 15 LDPNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELED---YIVEIEI-L 70
Query: 79 YLSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRI-IAKGYNSERDAATVLRAIVNAV 137
P +V+ Y + + +++E C GG + + +E V R ++ A+
Sbjct: 71 ATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEAL 130
Query: 138 NVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFG-SALLFEEGQVYRDIVGSGFYIAPE 196
N HS ++HRDLK N + +++ DFG SA + Q +G+ +++APE
Sbjct: 131 NFLHSKRIIHRDLKAGN---VLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPE 187
Query: 197 VLRRR------YGKEIDIWSAGVILYILLSGVPPFWAE---------TKKGTYDAILQGE 241
V+ Y + DIWS G+ L + PP K L
Sbjct: 188 VVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSDP--PTLL-- 243
Query: 242 IDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASDDTSVILRMKQ 301
W S +D ++ L K+P+ R +AAQ+LEHP++ ++ K
Sbjct: 244 ---TPSKW---SVEFRDFLKIALDKNPETRPSAAQLLEHPFVSSITSNKALRELVAEAKA 297
Query: 302 FRR 304
Sbjct: 298 EVM 300
|
| >1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... Length = 420 | Back alignment and structure |
|---|
Score = 144 bits (366), Expect = 8e-39
Identities = 78/310 (25%), Positives = 123/310 (39%), Gaps = 64/310 (20%)
Query: 21 VMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYL 80
+ Y +++G G FGV Y + A K + + + + RE+QI L
Sbjct: 52 QEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-------RELQIMRKL 104
Query: 81 SGQPNVVE----FKSTYE--DETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRA-- 132
N+V F S+ E DE +++V++ ++ R+ + Y+ + V+
Sbjct: 105 D-HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVY-RVA-RHYSRAKQTLPVIYVKL 160
Query: 133 ----IVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVG 188
+ ++ HS G+ HRD+KP+N + D A+LK+ DFGSA G+ +
Sbjct: 161 YMYQLFRSLAYIHSFGICHRDIKPQNL-LLDP-DTAVLKLCDFGSAKQLVRGEPNVSYIC 218
Query: 189 SGFYIAPEVL--RRRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQ-GEI--- 242
S +Y APE++ Y ID+WSAG +L LL G P F G + Q EI
Sbjct: 219 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF-----PGD-SGVDQLVEIIKV 272
Query: 243 ----------------------DFDTDPW-----PSISSTAKDLVRRMLTKDPKRRITAA 275
PW P A L R+L P R+T
Sbjct: 273 LGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPL 332
Query: 276 QVLEHPWLRE 285
+ H + E
Sbjct: 333 EACAHSFFDE 342
|
| >1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* Length = 348 | Back alignment and structure |
|---|
Score = 142 bits (361), Expect = 9e-39
Identities = 70/307 (22%), Positives = 121/307 (39%), Gaps = 35/307 (11%)
Query: 19 EDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRL 78
+D + R +G G FG Y + + A K ++ K + I +E++ L
Sbjct: 50 DDPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRF-L 108
Query: 79 YLSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVN 138
PN ++++ Y E +VME C G + K E + A V + +
Sbjct: 109 QKLRHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLA 168
Query: 139 VCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYR--DIVGSGFYIAPE 196
HS ++HRD+K N I + L+K+ DFGSA + VG+ +++APE
Sbjct: 169 YLHSHNMIHRDVKAGN---ILLSEPGLVKLGDFGSA-----SIMAPANSFVGTPYWMAPE 220
Query: 197 VL----RRRYGKEIDIWSAGVILYILLSGVPPFWAE---------TKKGTYDAILQGEID 243
V+ +Y ++D+WS G+ L PP + + + LQ
Sbjct: 221 VILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNES--PALQS--- 275
Query: 244 FDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASDDTSVILRMKQFR 303
S ++ V L K P+ R T+ +L+H ++ + +I R K
Sbjct: 276 ------GHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRERPPTVIMDLIQRTKDAV 329
Query: 304 RMNKLKK 310
R +
Sbjct: 330 RELDNLQ 336
|
| >4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} Length = 331 | Back alignment and structure |
|---|
Score = 141 bits (359), Expect = 1e-38
Identities = 78/329 (23%), Positives = 130/329 (39%), Gaps = 69/329 (20%)
Query: 10 RDPILGKAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRL-AEND 68
D Y M Y ++G G +G+ C T R A K K ++
Sbjct: 12 VDLGTENLYFQSMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIK------KFLESDDDK 65
Query: 69 MIR----REIQIRLYLSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYN-SE 123
M++ REI++ L N+V + + ++V E + + D +
Sbjct: 66 MVKKIAMREIKLLKQLR-HENLVNLLEVCKKKKRWYLVFEFVDH-TILDDLELFPNGLDY 123
Query: 124 RDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLF-EEGQV 182
+ L I+N + CHS ++HRD+KPEN +S+ +K+ DFG A G+V
Sbjct: 124 QVVQKYLFQIINGIGFCHSHNIIHRDIKPENI-LVSQSGV--VKLCDFGFARTLAAPGEV 180
Query: 183 YRDIVGSGFYIAPEVL--RRRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQG 240
Y D V + +Y APE+L +YGK +D+W+ G ++ + G P F ++
Sbjct: 181 YDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDS----------- 229
Query: 241 EID-------------------FDTDPW-------------------PSISSTAKDLVRR 262
+ID F+ +P P +S DL ++
Sbjct: 230 DIDQLYHIMMCLGNLIPRHQELFNKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKK 289
Query: 263 MLTKDPKRRITAAQVLEHPWLRESGEASD 291
L DP +R A++L H + + G A
Sbjct: 290 CLHIDPDKRPFCAELLHHDFFQMDGFAER 318
|
| >4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} Length = 394 | Back alignment and structure |
|---|
Score = 142 bits (361), Expect = 3e-38
Identities = 76/315 (24%), Positives = 127/315 (40%), Gaps = 59/315 (18%)
Query: 13 ILGKAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRR 72
GK E + Y +++G G FGV + ++ +A K K+ + R
Sbjct: 30 SDGKTGEQREIAYTNCKVIGNGSFGVVFQAKLVESDE------VAIK-KVLQ-DKRFKNR 81
Query: 73 EIQIRLYLSGQPNVVEFK------STYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDA 126
E+QI + PNVV+ K +DE +++V+E ++ R + Y +
Sbjct: 82 ELQIMRIVK-HPNVVDLKAFFYSNGDKKDEVFLNLVLEYVPE-TVY-RAS-RHYAKLKQT 137
Query: 127 ATVLRA------IVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEG 180
+L ++ ++ HS+G+ HRD+KP+N + + +LK+ DFGSA + G
Sbjct: 138 MPMLLIKLYMYQLLRSLAYIHSIGICHRDIKPQNL-LLDP-PSGVLKLIDFGSAKILIAG 195
Query: 181 QVYRDIVGSGFYIAPEVL--RRRYGKEIDIWSAGVILYILLSGVPPF------------- 225
+ + S +Y APE++ Y IDIWS G ++ L+ G P F
Sbjct: 196 EPNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEII 255
Query: 226 ----------WAETKKGTYDAILQGEIDFDTDPW-----PSISSTAKDLVRRMLTKDPKR 270
+ P+ P A DL+ R+L P
Sbjct: 256 KVLGTPSREQIKTMNPNYMEHKFP---QIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSA 312
Query: 271 RITAAQVLEHPWLRE 285
R+TA + L HP+ E
Sbjct: 313 RLTAIEALCHPFFDE 327
|
| >2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} Length = 318 | Back alignment and structure |
|---|
Score = 140 bits (354), Expect = 5e-38
Identities = 72/297 (24%), Positives = 118/297 (39%), Gaps = 41/297 (13%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFK 90
+G G G + T A K + + EN I ++ + L P +V+
Sbjct: 33 MGSGTCGQVWKMRFRKTGHVIAVKQMRRSGN--KEENKRILMDLDVVLKSHDCPYIVQCF 90
Query: 91 STYEDETAVHVVMELCEGG-DLFDRIIAKGYNSERDAATVLRAIVNAVNVCHS-MGVMHR 148
T+ T V + MEL + + + ER + AIV A+ GV+HR
Sbjct: 91 GTFITNTDVFIAMELMGTCAEKLKKRMQGPIP-ERILGKMTVAIVKALYYLKEKHGVIHR 149
Query: 149 DLKPENFSFISRDDNALLKVTDFG-SALLFEEGQVYRDIVGSGFYIAPEVLRRR------ 201
D+KP N I D+ +K+ DFG S L ++ R G Y+APE +
Sbjct: 150 DVKPSN---ILLDERGQIKLCDFGISGRLVDDKAKDRS-AGCAAYMAPERIDPPDPTKPD 205
Query: 202 YGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAI----------LQGEIDFDTDPWPS 251
Y D+WS G+ L L +G P+ + K ++ + L G + F
Sbjct: 206 YDIRADVWSLGISLVELATGQFPY--KNCKTDFEVLTKVLQEEPPLLPGHMGF------- 256
Query: 252 ISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASDD-----TSVILRMKQFR 303
S + V+ LTKD ++R ++LEH +++ D V+ + + R
Sbjct: 257 -SGDFQSFVKDCLTKDHRKRPKYNKLLEHSFIKRYETLEVDVASWFKDVMAKTESPR 312
|
| >3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A Length = 290 | Back alignment and structure |
|---|
Score = 138 bits (349), Expect = 2e-37
Identities = 66/276 (23%), Positives = 112/276 (40%), Gaps = 25/276 (9%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFK 90
LGRG +GV + + A K I E + ++ I + P V F
Sbjct: 15 LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNS--QEQKRLLMDLDISMRTVDCPFTVTFY 72
Query: 91 STYEDETAVHVVMELCEGG--DLFDRIIAKGYN-SERDAATVLRAIVNAVNVCHS-MGVM 146
E V + MEL + + ++I KG E + +IV A+ HS + V+
Sbjct: 73 GALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVI 132
Query: 147 HRDLKPENFSFISRDDNALLKVTDFG-SALLFEEGQVYRDIVGSGFYIAPEVLR-----R 200
HRD+KP N + + +K+ DFG S L ++ D G Y+APE + +
Sbjct: 133 HRDVKPSN---VLINALGQVKMCDFGISGYLVDDVAKDID-AGCKPYMAPERINPELNQK 188
Query: 201 RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYD---AILQGEI-DFDTDPWPSISSTA 256
Y + DIWS G+ + L P+ ++ + +++ D + S+
Sbjct: 189 GYSVKSDIWSLGITMIELAILRFPY--DSWGTPFQQLKQVVEEPSPQLPADKF---SAEF 243
Query: 257 KDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASDD 292
D + L K+ K R T ++++HP+ D
Sbjct: 244 VDFTSQCLKKNSKERPTYPELMQHPFFTLHESKGTD 279
|
| >3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* Length = 327 | Back alignment and structure |
|---|
Score = 138 bits (350), Expect = 2e-37
Identities = 68/296 (22%), Positives = 116/296 (39%), Gaps = 32/296 (10%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFK 90
+GRG +G + + A K I E + ++ + + S P +V+F
Sbjct: 30 IGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDE--KEQKQLLMDLDVVMRSSDCPYIVQFY 87
Query: 91 STYEDETAVHVVMELCEGGDLFDRIIAKGYN------SERDAATVLRAIVNAVNVCHSMG 144
E + MEL FD+ Y+ E + A V A+N
Sbjct: 88 GALFREGDCWICMELMSTS--FDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENL 145
Query: 145 -VMHRDLKPENFSFISRDDNALLKVTDFG-SALLFEEGQVYRDIVGSGFYIAPEVL---- 198
++HRD+KP N I D + +K+ DFG S L + G Y+APE +
Sbjct: 146 KIIHRDIKPSN---ILLDRSGNIKLCDFGISGQLVDSIA-KTRDAGCRPYMAPERIDPSA 201
Query: 199 -RRRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDA---ILQGEI-DFDTDPWPSIS 253
R+ Y D+WS G+ LY L +G P+ +D +++G+ S
Sbjct: 202 SRQGYDVRSDVWSLGITLYELATGRFPY--PKWNSVFDQLTQVVKGDPPQLSNSEEREFS 259
Query: 254 STAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASDD-----TSVILRMKQFRR 304
+ + V LTKD +R ++L+HP++ E + + ++ +M
Sbjct: 260 PSFINFVNLCLTKDESKRPKYKELLKHPFILMYEERAVEVACYVCKILDQMPATPS 315
|
| >2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} Length = 326 | Back alignment and structure |
|---|
Score = 138 bits (349), Expect = 3e-37
Identities = 68/334 (20%), Positives = 124/334 (37%), Gaps = 42/334 (12%)
Query: 1 MGCSVSKNQRDPILGKAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKP 60
M D I A D + ++G G +G Y T + A K +
Sbjct: 2 MASDSPARSLDEIDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVM---- 57
Query: 61 KMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVH------VVMELCEGGDLFD- 113
+ E + I++EI + S N+ + + + +VME C G + D
Sbjct: 58 DVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDL 117
Query: 114 -RIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFG 172
+ E A + R I+ ++ H V+HRD+K +N + +NA +K+ DFG
Sbjct: 118 IKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQN---VLLTENAEVKLVDFG 174
Query: 173 -SALLFEEGQVYRDIVGSGFYIAPEVLRRR------YGKEIDIWSAGVILYILLSGVPPF 225
SA L +G+ +++APEV+ Y + D+WS G+ + G PP
Sbjct: 175 VSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPL 234
Query: 226 WAE---------TKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQ 276
+ L+ + W S + + L K+ +R Q
Sbjct: 235 CDMHPMRALFLIPRNPA--PRLKSK------KW---SKKFQSFIESCLVKNHSQRPATEQ 283
Query: 277 VLEHPWLRESGEASDDTSVILRMKQFRRMNKLKK 310
+++HP++R+ + + + +K
Sbjct: 284 LMKHPFIRDQPNERQVRIQLKDHIDRTKKKRGEK 317
|
| >3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* Length = 329 | Back alignment and structure |
|---|
Score = 136 bits (344), Expect = 2e-36
Identities = 82/303 (27%), Positives = 121/303 (39%), Gaps = 68/303 (22%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRL-AEND-----MIRREIQIRLYLSGQP 84
LG G +G Y + TN A K ++RL E + IR E+ + L
Sbjct: 42 LGEGTYGEVYKAIDTVTNETVAIK------RIRLEHEEEGVPGTAIR-EVSLLKELQ-HR 93
Query: 85 NVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMG 144
N++E KS +H++ E E DL + S R + L ++N VN CHS
Sbjct: 94 NIIELKSVIHHNHRLHLIFEYAEN-DLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHSRR 152
Query: 145 VMHRDLKPEN--FSFISRDDNALLKVTDFGSALLF-EEGQVYRDIVGSGFYIAPEVL--R 199
+HRDLKP+N S + +LK+ DFG A F + + + + +Y PE+L
Sbjct: 153 CLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEIITLWYRPPEILLGS 212
Query: 200 RRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEID-----FDT------DP 248
R Y +DIWS I +L P F ++ EID F+
Sbjct: 213 RHYSTSVDIWSIACIWAEMLMKTPLFPGDS-----------EIDQLFKIFEVLGLPDDTT 261
Query: 249 WPSISS--------------------------TAKDLVRRMLTKDPKRRITAAQVLEHPW 282
WP +++ DL+ ML DP +RI+A LEHP+
Sbjct: 262 WPGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEHPY 321
Query: 283 LRE 285
Sbjct: 322 FSH 324
|
| >3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* Length = 360 | Back alignment and structure |
|---|
Score = 136 bits (345), Expect = 2e-36
Identities = 72/321 (22%), Positives = 117/321 (36%), Gaps = 51/321 (15%)
Query: 15 GKAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREI 74
K E + LG G GV + + + A K I + K A + I RE+
Sbjct: 25 QKVGELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKP--AIRNQIIREL 82
Query: 75 QIRLYLSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIV 134
Q+ L+ P +V F + + + + ME +GG L + G E+ V A++
Sbjct: 83 QV-LHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVI 141
Query: 135 NAVNVCHSMG-VMHRDLKPENFSFISRDDNALLKVTDFG-SALLFEEGQVYRDIVGSGFY 192
+ +MHRD+KP N I + +K+ DFG S L + VG+ Y
Sbjct: 142 KGLTYLREKHKIMHRDVKPSN---ILVNSRGEIKLCDFGVSGQL--IDSMANSFVGTRSY 196
Query: 193 IAPEVLR-RRYGKEIDIWSAGVILYILLSGVPPF--------------------WAETKK 231
++PE L+ Y + DIWS G+ L + G P +
Sbjct: 197 MSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPR 256
Query: 232 GTYDAILQGEIDFDTDPWPSI--------------------SSTAKDLVRRMLTKDPKRR 271
+ D+ P +I S +D V + L K+P R
Sbjct: 257 PRTPGRPLNKFGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAER 316
Query: 272 ITAAQVLEHPWLRESGEASDD 292
Q++ H +++ S D
Sbjct: 317 ADLKQLMVHAFIKRSDAEEVD 337
|
| >3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389 | Back alignment and structure |
|---|
Score = 136 bits (344), Expect = 5e-36
Identities = 58/357 (16%), Positives = 123/357 (34%), Gaps = 72/357 (20%)
Query: 17 AYEDVMLHYFFGRMLGRGQ--FGVSYLCTENSTNRPYACKSIAKKPKMRLAENDM---IR 71
++ Y ++G+G L T + I + N+M ++
Sbjct: 19 SFLPEGGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRI----NLEACSNEMVTFLQ 74
Query: 72 REIQIRLYLSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYN---SERDAAT 128
E+ + L PN+V +++T+ + + VV G D +I + +E A
Sbjct: 75 GELHV-SKLFNHPNIVPYRATFIADNELWVVTSFMAYGSAKD-LICTHFMDGMNELAIAY 132
Query: 129 VLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFG-SALLFEEGQ------ 181
+L+ ++ A++ H MG +HR +K + I + + ++ + + GQ
Sbjct: 133 ILQGVLKALDYIHHMGYVHRSVKASH---ILISVDGKVYLSGLRSNLSMISHGQRQRVVH 189
Query: 182 -VYRDIVGSGFYIAPEVLRRR---YGKEIDIWSAGVILYILLSGVPPF------------ 225
+ V +++PEVL++ Y + DI+S G+ L +G PF
Sbjct: 190 DFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEK 249
Query: 226 ------------------------WAETKKGTYDAILQGEIDFDTDPWPSI------SST 255
+ G D++ PS S
Sbjct: 250 LNGTVPCLLDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPH 309
Query: 256 AKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASDD--TSVILRMKQFRRMNKLKK 310
V + L ++P R +A+ +L H + ++ + + ++ + +
Sbjct: 310 FHHFVEQCLQRNPDARPSASTLLNHSFFKQIKRRASEALPELLRPVTPITNFEGSQS 366
|
| >1ij5_A Plasmodial specific LAV1-2 protein; fourty kDa calcium binding protein, CBP40, metal binding protein; 3.00A {Physarum polycephalum} SCOP: a.39.1.9 PDB: 1ij6_A Length = 323 | Back alignment and structure |
|---|
Score = 134 bits (338), Expect = 8e-36
Identities = 41/237 (17%), Positives = 86/237 (36%), Gaps = 21/237 (8%)
Query: 249 WPSISSTAKDLVRRMLTKDPKR--RITAAQVLEHPW--LRESGEASD---DTSVILRMKQ 301
I+ ++ ++ D K A + E R A + +
Sbjct: 43 EAQIAQKEQEQKAKLAEYDQKVQNEFDARERAEREREAARGDAAAEKQRLASLLKDLEDD 102
Query: 302 FRRMNKLKKLTIKVIVEYLPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTE 361
N+L+ L +E+T L++ F+ +G S+ +L+ L K + E
Sbjct: 103 ASGYNRLR-----PSKPMLSEEDTNILRQLFLSSAVSGSGKFSFQDLKQVLAKYADTIPE 157
Query: 362 FDVKHLMEAV-KNSSTLESLCENLP-TKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKL 419
+K L V ++ S + + L+ FR++DT+++ TL+ E + +L
Sbjct: 158 GPLKKLFVMVENDTKGRMSYITLVAVANDLAALVADFRKIDTNSNGTLSRKEFREHFVRL 217
Query: 420 GSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIYKLETPELLEKAFQYLDKNSD 476
G + + D D + ++ E+V+L + L + + D +
Sbjct: 218 GFDKKS-VQDALFRYADEDESDDVGFSEYVHLGLCLLV------LRILYAFADFDKS 267
|
| >1ij5_A Plasmodial specific LAV1-2 protein; fourty kDa calcium binding protein, CBP40, metal binding protein; 3.00A {Physarum polycephalum} SCOP: a.39.1.9 PDB: 1ij6_A Length = 323 | Back alignment and structure |
|---|
Score = 106 bits (267), Expect = 7e-26
Identities = 30/189 (15%), Positives = 61/189 (32%), Gaps = 17/189 (8%)
Query: 295 VILRMKQFRRMNKLKKLTIKVIVEYLPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTK 354
+ ++ +K + ++ + ++ Q K K E D E +
Sbjct: 24 LQKKLDHTSFAHKEDRDRLEAQIA----QKEQEQKAKLAEYDQKVQNEFDARERAERERE 79
Query: 355 VGSMLTEFDVKHLMEAVKN-------SSTLESLCENLPTKEKQKLMEKFREMDTDNSDTL 407
+ + L +K+ + L L ++ L + F S
Sbjct: 80 AARGDAAAEKQRLASLLKDLEDDASGYNRLRPSKPMLSEEDTNILRQLFLSSAVSGSGKF 139
Query: 408 TLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIYKLETPELLEKA 467
+ +LK LAK + E + + + D G + I V + D+ L
Sbjct: 140 SFQDLKQVLAKYADTIPEGPLKKLFVMVENDTKGRMSYITLVAVANDLAA------LVAD 193
Query: 468 FQYLDKNSD 476
F+ +D NS+
Sbjct: 194 FRKIDTNSN 202
|
| >1ij5_A Plasmodial specific LAV1-2 protein; fourty kDa calcium binding protein, CBP40, metal binding protein; 3.00A {Physarum polycephalum} SCOP: a.39.1.9 PDB: 1ij6_A Length = 323 | Back alignment and structure |
|---|
Score = 69.8 bits (171), Expect = 3e-13
Identities = 29/140 (20%), Positives = 51/140 (36%), Gaps = 4/140 (2%)
Query: 323 EETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAV-KNSSTLESLC 381
+ AL F ++DT+ NGTLS E R ++G L ++ S
Sbjct: 185 NDLAALVADFRKIDTNSNGTLSRKEFREHFVRLGFDKKS-VQDALFRYADEDESDDVGFS 243
Query: 382 ENLP-TKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLG-SALEESEVNQYMEAGDIDG 439
E + L + D D S L+ E++ L + D+D
Sbjct: 244 EYVHLGLCLLVLRILYAFADFDKSGQLSKEEVQKVLEDAHIPESARKKFEHQFSVVDVDD 303
Query: 440 NGNIDSIEFVNLMTDIYKLE 459
+ ++ EFV L+ ++ +
Sbjct: 304 SKSLSYQEFVMLVLLMFHDD 323
|
| >3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3mb7_A* 3mb6_A* 3owj_A* 3owk_A* ... Length = 330 | Back alignment and structure |
|---|
Score = 134 bits (339), Expect = 1e-35
Identities = 71/303 (23%), Positives = 124/303 (40%), Gaps = 51/303 (16%)
Query: 20 DVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLY 79
Y R LGRG++ + + N K ++ + I+REI+I
Sbjct: 33 GNQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVK------ILKPVKKKKIKREIKILEN 86
Query: 80 LSGQPNVVEFKSTYEDE---TAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNA 136
L G PN++ +D T V + D ++ ++ D + I+ A
Sbjct: 87 LRGGPNIITLADIVKDPVSRTPALVFEHV-NNTDF-KQLYQT--LTDYDIRFYMYEILKA 142
Query: 137 VNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPE 196
++ CHSMG+MHRD+KP N I ++ L++ D+G A + GQ Y V S ++ PE
Sbjct: 143 LDYCHSMGIMHRDVKPHNV-MIDH-EHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPE 200
Query: 197 VL--RRRYGKEIDIWSAGVILYILLSGVPPF------------------------WAETK 230
+L + Y +D+WS G +L ++ PF + +
Sbjct: 201 LLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKY 260
Query: 231 KGT----YDAILQG------EIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEH 280
++ IL E ++ +S A D + ++L D + R+TA + +EH
Sbjct: 261 NIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEH 320
Query: 281 PWL 283
P+
Sbjct: 321 PYF 323
|
| >2aao_A CDPK, calcium-dependent protein kinase, isoform AK1; calmodulin-like domain, EF calcium binding protein, transferase; 2.00A {Arabidopsis thaliana} Length = 166 | Back alignment and structure |
|---|
Score = 127 bits (321), Expect = 7e-35
Identities = 59/162 (36%), Positives = 90/162 (55%), Gaps = 10/162 (6%)
Query: 300 KQFRRMNKLKKLTIKVIVEYLPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSML 359
KQF MNK KK+ ++VI E L +EE LKE F +D DK+G ++++EL+AGL +VG+ L
Sbjct: 1 KQFSAMNKFKKMALRVIAESLSEEEIAGLKEMFNMIDADKSGQITFEELKAGLKRVGANL 60
Query: 360 TEFDVKHLMEAV--KNSSTLE-----SLCENLPTKEKQ-KLMEKFREMDTDNSDTLTLSE 411
E ++ LM+A NS T++ + +L E++ L F D D S +T E
Sbjct: 61 KESEILDLMQAADVDNSGTIDYKEFIAATLHLNKIEREDHLFAAFTYFDKDGSGYITPDE 120
Query: 412 LKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMT 453
L+ + G +E+ + + M D D +G ID EFV +M
Sbjct: 121 LQQACEEFG--VEDVRIEELMRDVDQDNDGRIDYNEFVAMMQ 160
|
| >2aao_A CDPK, calcium-dependent protein kinase, isoform AK1; calmodulin-like domain, EF calcium binding protein, transferase; 2.00A {Arabidopsis thaliana} Length = 166 | Back alignment and structure |
|---|
Score = 102 bits (256), Expect = 8e-26
Identities = 38/95 (40%), Positives = 55/95 (57%)
Query: 382 ENLPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNG 441
E+L +E L E F +D D S +T ELKAGL ++G+ L+ESE+ M+A D+D +G
Sbjct: 19 ESLSEEEIAGLKEMFNMIDADKSGQITFEELKAGLKRVGANLKESEILDLMQAADVDNSG 78
Query: 442 NIDSIEFVNLMTDIYKLETPELLEKAFQYLDKNSD 476
ID EF+ + K+E + L AF Y DK+
Sbjct: 79 TIDYKEFIAATLHLNKIEREDHLFAAFTYFDKDGS 113
|
| >3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} Length = 324 | Back alignment and structure |
|---|
Score = 131 bits (332), Expect = 9e-35
Identities = 72/318 (22%), Positives = 123/318 (38%), Gaps = 60/318 (18%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMI----RREIQIRLYLSGQPNV 86
LG G + Y T+ A K ++RL + RE+ + L N+
Sbjct: 10 LGEGTYATVYKGKSKLTDNLVALK------EIRLEHEEGAPCTAIREVSLLKDLK-HANI 62
Query: 87 VEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGY----NSERDAATV---LRAIVNAVNV 139
V E ++ +V E + DL K Y + + V L ++ +
Sbjct: 63 VTLHDIIHTEKSLTLVFEYLDK-DL------KQYLDDCGNIINMHNVKLFLFQLLRGLAY 115
Query: 140 CHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLF-EEGQVYRDIVGSGFYIAPEVL 198
CH V+HRDLKP+N + ++ LK+ DFG A + Y + V + +Y P++L
Sbjct: 116 CHRQKVLHRDLKPQN---LLINERGELKLADFGLARAKSIPTKTYDNEVVTLWYRPPDIL 172
Query: 199 --RRRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQ----------------- 239
Y +ID+W G I Y + +G P F T + I +
Sbjct: 173 LGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNE 232
Query: 240 --GEIDFDTDP-------WPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEAS 290
++ P + S DL+ ++L + + RI+A ++HP+ GE
Sbjct: 233 EFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHPFFLSLGERI 292
Query: 291 D---DTSVILRMKQFRRM 305
DT+ I +K+ +
Sbjct: 293 HKLPDTTSIFALKEIQLQ 310
|
| >2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* Length = 317 | Back alignment and structure |
|---|
Score = 131 bits (331), Expect = 9e-35
Identities = 69/298 (23%), Positives = 104/298 (34%), Gaps = 54/298 (18%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMI----RREIQIRLYLSGQPNV 86
LG G + Y +T A K +++L + REI + L N+
Sbjct: 13 LGNGTYATVYKGLNKTTGVYVALK------EVKLDSEEGTPSTAIREISLMKELK-HENI 65
Query: 87 VEFKSTYEDETAVHVVMELCEGGDL---FDRIIAKGYNSERDAATV---LRAIVNAVNVC 140
V E + +V E + DL D + V ++ + C
Sbjct: 66 VRLYDVIHTENKLTLVFEFMDN-DLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFC 124
Query: 141 HSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLF-EEGQVYRDIVGSGFYIAPEVL- 198
H ++HRDLKP+N + + LK+ DFG A F + V + +Y AP+VL
Sbjct: 125 HENKILHRDLKPQN---LLINKRGQLKLGDFGLARAFGIPVNTFSSEVVTLWYRAPDVLM 181
Query: 199 -RRRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQ--G--------------- 240
R Y IDIWS G IL +++G P F + I G
Sbjct: 182 GSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTKLPK 241
Query: 241 -------------EIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRE 285
+ D + +L +P R++A Q L HPW E
Sbjct: 242 YNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHHPWFAE 299
|
| >3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} Length = 308 | Back alignment and structure |
|---|
Score = 131 bits (331), Expect = 9e-35
Identities = 74/308 (24%), Positives = 116/308 (37%), Gaps = 75/308 (24%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIR------REIQI--RLYLSG 82
+G G +G Y + + A KS+ ++ RE+ + RL
Sbjct: 17 IGVGAYGTVYKARDPHSGHFVALKSV----RVPNGGGGGGGLPISTVREVALLRRLEAFE 72
Query: 83 QPNVVEFK-----STYEDETAVHVVMELCEGGDL---FDRIIAKGYNSERDAATVLRAIV 134
PNVV S + E V +V E + DL D+ G ++R +
Sbjct: 73 HPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGL-PAETIKDLMRQFL 130
Query: 135 NAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIA 194
++ H+ ++HRDLKPEN I +K+ DFG A ++ +V + +Y A
Sbjct: 131 RGLDFLHANCIVHRDLKPEN---ILVTSGGTVKLADFGLARIYSYQMALTPVVVTLWYRA 187
Query: 195 PEVL-RRRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQG--EID-----FDT 246
PEVL + Y +D+WS G I + P + G E D FD
Sbjct: 188 PEVLLQSTYATPVDMWSVGCIFAEMFRRKP-------------LFCGNSEADQLGKIFDL 234
Query: 247 ------DPWPSISS-----------------------TAKDLVRRMLTKDPKRRITAAQV 277
D WP S + L+ MLT +P +RI+A +
Sbjct: 235 IGLPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRA 294
Query: 278 LEHPWLRE 285
L+H +L +
Sbjct: 295 LQHSYLHK 302
|
| >1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 Length = 346 | Back alignment and structure |
|---|
Score = 129 bits (327), Expect = 6e-34
Identities = 78/306 (25%), Positives = 125/306 (40%), Gaps = 77/306 (25%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIR--------REIQIRLYLSG 82
LG GQF Y + +TN+ A K K++L + REI++ LS
Sbjct: 18 LGEGQFATVYKARDKNTNQIVAIK------KIKLGHRSEAKDGINRTALREIKLLQELS- 70
Query: 83 QPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATV---LRAIVNAVNV 139
PN++ + ++ + +V + E DL +I K + + + + + +
Sbjct: 71 HPNIIGLLDAFGHKSNISLVFDFMET-DL--EVIIKDNSLVLTPSHIKAYMLMTLQGLEY 127
Query: 140 CHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLF-EEGQVYRDIVGSGFYIAPEVL 198
H ++HRDLKP N + D+N +LK+ DFG A F + Y V + +Y APE+L
Sbjct: 128 LHQHWILHRDLKPNNL-LL--DENGVLKLADFGLAKSFGSPNRAYTHQVVTRWYRAPELL 184
Query: 199 --RRRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQG--EID-----FDT--- 246
R YG +D+W+ G IL LL VP L G ++D F+T
Sbjct: 185 FGARMYGVGVDMWAVGCILAELLLRVP-------------FLPGDSDLDQLTRIFETLGT 231
Query: 247 ---DPWPSISS------------------------TAKDLVRRMLTKDPKRRITAAQVLE 279
+ WP + S DL++ + +P RITA Q L+
Sbjct: 232 PTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALK 291
Query: 280 HPWLRE 285
+
Sbjct: 292 MKYFSN 297
|
| >3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A Length = 292 | Back alignment and structure |
|---|
Score = 128 bits (323), Expect = 9e-34
Identities = 77/292 (26%), Positives = 126/292 (43%), Gaps = 50/292 (17%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRL-AENDMI----RREIQIRLYLSGQPN 85
+G G +G + T+ A K ++RL +++ + REI + L N
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALK------RVRLDDDDEGVPSSALREICLLKELK-HKN 62
Query: 86 VVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATV---LRAIVNAVNVCHS 142
+V + + +V E C+ DL + N + D V L ++ + CHS
Sbjct: 63 IVRLHDVLHSDKKLTLVFEFCDQ-DL--KKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHS 119
Query: 143 MGVMHRDLKPENFSFISRDDNALLKVTDFGSALLF-EEGQVYRDIVGSGFYIAPEVL--R 199
V+HRDLKP+N I + N LK+ +FG A F + Y V + +Y P+VL
Sbjct: 120 RNVLHRDLKPQNL-LI--NRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGA 176
Query: 200 RRYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQ--G----EI--------DF 244
+ Y ID+WSAG I L + G P F I + G E D+
Sbjct: 177 KLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDY 236
Query: 245 DTDP-----------WPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRE 285
P P +++T +DL++ +L +P +RI+A + L+HP+ +
Sbjct: 237 KPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSD 288
|
| >1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A Length = 288 | Back alignment and structure |
|---|
Score = 126 bits (320), Expect = 2e-33
Identities = 80/296 (27%), Positives = 126/296 (42%), Gaps = 58/296 (19%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRL-AENDMI----RREIQIRLYLSGQPN 85
+G G +GV Y N+ +A K K+RL E++ I REI I L N
Sbjct: 10 IGEGTYGVVYKAQ-NNYGETFALK------KIRLEKEDEGIPSTTIREISILKELK-HSN 61
Query: 86 VVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGY----NSERDAATV---LRAIVNAVN 138
+V+ + + +V E + DL K ++ T L ++N +
Sbjct: 62 IVKLYDVIHTKKRLVLVFEHLDQ-DL------KKLLDVCEGGLESVTAKSFLLQLLNGIA 114
Query: 139 VCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLF-EEGQVYRDIVGSGFYIAPEV 197
CH V+HRDLKP+N + + LK+ DFG A F + Y + + +Y AP+V
Sbjct: 115 YCHDRRVLHRDLKPQN---LLINREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDV 171
Query: 198 L--RRRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQ--G------------- 240
L ++Y IDIWS G I +++G P F ++ I + G
Sbjct: 172 LMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTEL 231
Query: 241 ---EIDFDTDP-------WPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRES 286
+ +F + + DL+ +ML DP +RITA Q LEH + +E+
Sbjct: 232 PKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKEN 287
|
| >3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} PDB: 2qkr_A* Length = 311 | Back alignment and structure |
|---|
Score = 127 bits (322), Expect = 2e-33
Identities = 79/305 (25%), Positives = 125/305 (40%), Gaps = 51/305 (16%)
Query: 18 YEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRL-AENDMI----RR 72
++ +M Y +G G +GV Y +S R A K ++RL AE++ I R
Sbjct: 16 FQGLMEKYQKLEKVGEGTYGVVYKAK-DSQGRIVALK------RIRLDAEDEGIPSTAIR 68
Query: 73 EIQIRLYLSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATV--- 129
EI + L PN+V E + +V E E DL + + + + +
Sbjct: 69 EISLLKELH-HPNIVSLIDVIHSERCLTLVFEFMEK-DL--KKVLDENKTGLQDSQIKIY 124
Query: 130 LRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLF-EEGQVYRDIVG 188
L ++ V CH ++HRDLKP+N + + + LK+ DFG A F + Y V
Sbjct: 125 LYQLLRGVAHCHQHRILHRDLKPQN---LLINSDGALKLADFGLARAFGIPVRSYTHEVV 181
Query: 189 SGFYIAPEVL--RRRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQ------- 239
+ +Y AP+VL ++Y +DIWS G I +++G P F T I
Sbjct: 182 TLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNP 241
Query: 240 ------------GEIDFDTDP-------WPSISSTAKDLVRRMLTKDPKRRITAAQVLEH 280
+ F P DL+ ML DP +RI+A + H
Sbjct: 242 REWPQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNH 301
Query: 281 PWLRE 285
P+ ++
Sbjct: 302 PYFKD 306
|
| >3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} Length = 360 | Back alignment and structure |
|---|
Score = 128 bits (323), Expect = 3e-33
Identities = 83/341 (24%), Positives = 130/341 (38%), Gaps = 80/341 (23%)
Query: 2 GCSVSKNQRDPILGKAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPK 61
G +S N ++ + M + RM G+G FG L E ST A K + + P
Sbjct: 3 GSMMSLNAAAAADERSRK-EMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDP- 60
Query: 62 MRLAENDMIRREIQI--RLYLSGQPNVVEFK-------STYEDETAVHVVMELCEGGDLF 112
R RE+QI L + PN+V+ + + ++VVME L
Sbjct: 61 -RFR-----NRELQIMQDLAVLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPD-TLH 113
Query: 113 DRIIAKGYNSERDAAT----------VLRAIVNAVNVCH--SMGVMHRDLKPENFSFISR 160
R + Y + A ++R+I H S+ V HRD+KP N ++
Sbjct: 114 -RCC-RNYYRRQVAPPPILIKVFLFQLIRSI----GCLHLPSVNVCHRDIKPHNV-LVNE 166
Query: 161 DDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVL--RRRYGKEIDIWSAGVILYIL 218
+ LK+ DFGSA + + S +Y APE++ + Y +DIWS G I +
Sbjct: 167 A-DGTLKLCDFGSAKKLSPSEPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEM 225
Query: 219 LSGVPPFWAETKKGTYDAILQ-GEI-------------------------DFDTDPW--- 249
+ G P F +G ++ Q EI + PW
Sbjct: 226 MLGEPIF-----RGD-NSAGQLHEIVRVLGCPSREVLRKLNPSHTDVDLYNSKGIPWSNV 279
Query: 250 -----PSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRE 285
+ A DL+ +L P+ R+ + L HP+ E
Sbjct: 280 FSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCHPYFDE 320
|
| >2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} Length = 309 | Back alignment and structure |
|---|
Score = 125 bits (315), Expect = 2e-32
Identities = 68/258 (26%), Positives = 115/258 (44%), Gaps = 22/258 (8%)
Query: 24 HYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMI----RREIQIRLY 79
Y R++GRG G Y + R A K + L+ + + +RE +
Sbjct: 35 PYRLRRLVGRGGMGDVYEAEDTVRERIVALKLM----SETLSSDPVFRTRMQREARTAGR 90
Query: 80 LSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNV 139
L +P+VV E + ++V M L G DL + +G + A ++R I +A++
Sbjct: 91 LQ-EPHVVPIHDFGEIDGQLYVDMRLINGVDLAAMLRRQGPLAPPRAVAIVRQIGSALDA 149
Query: 140 CHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYR--DIVGSGFYIAPEV 197
H+ G HRD+KPEN +S DD A + DFG A + ++ + + VG+ +Y+APE
Sbjct: 150 AHAAGATHRDVKPENI-LVSADDFA--YLVDFGIASATTDEKLTQLGNTVGTLYYMAPER 206
Query: 198 LRRRYGKEI----DIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSIS 253
DI++ +LY L+G PP+ + A + I + P I
Sbjct: 207 FS---ESHATYRADIYALTCVLYECLTGSPPYQGDQLSVMG-AHINQAIPRPSTVRPGIP 262
Query: 254 STAKDLVRRMLTKDPKRR 271
++ R + K+P+ R
Sbjct: 263 VAFDAVIARGMAKNPEDR 280
|
| >1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B Length = 326 | Back alignment and structure |
|---|
Score = 125 bits (316), Expect = 2e-32
Identities = 70/294 (23%), Positives = 118/294 (40%), Gaps = 49/294 (16%)
Query: 31 LGRGQFGVSYLCTE-NSTNRPYACKSIAKKPKMRL-AENDMI----RREIQI--RLYLSG 82
+G G +G + + + R A K ++R+ + + RE+ + L
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALK------RVRVQTGEEGMPLSTIREVAVLRHLETFE 72
Query: 83 QPNVVEFK-----STYEDETAVHVVMELCEGGDL--FDRIIAKGYNSERDAATVLRAIVN 135
PNVV S + ET + +V E + DL + + + ++ ++
Sbjct: 73 HPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGVPTETIKDMMFQLLR 131
Query: 136 AVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAP 195
++ HS V+HRDLKP+N I + +K+ DFG A ++ +V + +Y AP
Sbjct: 132 GLDFLHSHRVVHRDLKPQN---ILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAP 188
Query: 196 EVL-RRRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQ--G----EI--DFDT 246
EVL + Y +D+WS G I + P F + IL G E
Sbjct: 189 EVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVA 248
Query: 247 DPW---------------PSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRE 285
P I KDL+ + LT +P +RI+A L HP+ ++
Sbjct: 249 LPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQD 302
|
| >1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A Length = 373 | Back alignment and structure |
|---|
Score = 125 bits (316), Expect = 3e-32
Identities = 64/323 (19%), Positives = 117/323 (36%), Gaps = 72/323 (22%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLS------- 81
R LG G F +L + N A K + + EI++ ++
Sbjct: 25 RKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYT----EAAEDEIKLLQRVNDADNTKE 80
Query: 82 ---GQPNVVEFKS--TYEDETAVHV--VMELCEGGDLFDRIIAKGYN--SERDAATVLRA 132
G ++++ ++ VHV V E+ G +L I + + +
Sbjct: 81 DSMGANHILKLLDHFNHKGPNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQ 139
Query: 133 IVNAVNVCHSM-GVMHRDLKPENFSFISRDDNAL---LKVTDFGSALLFEEGQVYRDIVG 188
++ ++ H G++H D+KPEN D +K+ D G+A + + I
Sbjct: 140 LLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNAC-WYDEHYTNSIQ- 197
Query: 189 SGFYIAPEV-LRRRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQ-------- 239
+ Y +PEV L +G DIWS +++ L++G F +
Sbjct: 198 TREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELL 257
Query: 240 GEID-------------FDTD----------PWP---SISSTAK----------DLVRRM 263
GE+ F++ WP ++ K D + M
Sbjct: 258 GELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPM 317
Query: 264 LTKDPKRRITAAQVLEHPWLRES 286
L DP++R A ++ HPWL+++
Sbjct: 318 LQLDPRKRADAGGLVNHPWLKDT 340
|
| >3mse_B Calcium-dependent protein kinase, putative; CDPKS, malaria, structural genomics consortium, SGC, transfe; 2.10A {Plasmodium falciparum} Length = 180 | Back alignment and structure |
|---|
Score = 120 bits (302), Expect = 4e-32
Identities = 32/178 (17%), Positives = 78/178 (43%), Gaps = 21/178 (11%)
Query: 292 DTSVILRMKQFRRMNKLKKLTIKVIVEYLP--DEETQALKEKFIEMDTDKNGTLSYDELR 349
+V+ MK + + + ++ + I ++ L + + + E F ++DT+ NG+LS+ E+
Sbjct: 3 SPNVLNNMKSYMKHSNIRNIIINIMAHELSVINNHIKYINELFYKLDTNHNGSLSHREIY 62
Query: 350 AGLTKVGSMLTEFDVKHLMEAV--KNSSTLE-----SLCENLPTKEKQKLMEKFREMDTD 402
L VG + ++D+ +++A+ + + + C E L F ++D D
Sbjct: 63 TVLASVG--IKKWDINRILQALDINDRGNITYTEFMAGCYRWKNIESTFLKAAFNKIDKD 120
Query: 403 NSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGN--------IDSIEFVNLM 452
++ S++ + + L+ ++++ + + G I EF + M
Sbjct: 121 EDGYISKSDIVSLVHDKV--LDNNDIDNFFLSVHSIKKGIPREHIINKISFQEFKDYM 176
|
| >3mse_B Calcium-dependent protein kinase, putative; CDPKS, malaria, structural genomics consortium, SGC, transfe; 2.10A {Plasmodium falciparum} Length = 180 | Back alignment and structure |
|---|
Score = 92.4 bits (230), Expect = 4e-22
Identities = 25/94 (26%), Positives = 53/94 (56%), Gaps = 3/94 (3%)
Query: 383 NLPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGN 442
++ + + E F ++DT+++ +L+ E+ LA +G +++ ++N+ ++A DI+ GN
Sbjct: 32 SVINNHIKYINELFYKLDTNHNGSLSHREIYTVLASVG--IKKWDINRILQALDINDRGN 89
Query: 443 IDSIEFVNLMTDIYKLETPELLEKAFQYLDKNSD 476
I EF+ +E+ L+ AF +DK+ D
Sbjct: 90 ITYTEFMAGCYRWKNIES-TFLKAAFNKIDKDED 122
|
| >4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} Length = 294 | Back alignment and structure |
|---|
Score = 123 bits (310), Expect = 6e-32
Identities = 71/270 (26%), Positives = 115/270 (42%), Gaps = 29/270 (10%)
Query: 25 YFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMI----RREIQIRLYL 80
Y LG G YL + N A K+I + E + RE+ L
Sbjct: 13 YKIVDKLGGGGMSTVYLAEDTILNIKVAIKAI----FIPPREKEETLKRFEREVHNSSQL 68
Query: 81 SGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVC 140
S N+V E++ ++VME EG L + I + G S A I++ +
Sbjct: 69 S-HQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHA 127
Query: 141 HSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRD--IVGSGFYIAPEVL 198
H M ++HRD+KP+N I + K+ DFG A E + + ++G+ Y +PE
Sbjct: 128 HDMRIVHRDIKPQNI-LIDSNKTL--KIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQA 184
Query: 199 RRRY-GKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAI------LQGEI-DFDTDPWP 250
+ + DI+S G++LY +L G PPF ET A+ +Q + + TD
Sbjct: 185 KGEATDECTDIYSIGIVLYEMLVGEPPFNGET------AVSIAIKHIQDSVPNVTTDVRK 238
Query: 251 SISSTAKDLVRRMLTKDPKRR-ITAAQVLE 279
I + +++ R KD R T ++ +
Sbjct: 239 DIPQSLSNVILRATEKDKANRYKTIQEMKD 268
|
| >3khe_A Calmodulin-like domain protein kinase isoform 3; calcium dependent kinase, structural genomics, structural GE consortium, SGC, ATP-binding; 1.95A {Toxoplasma gondii} Length = 191 | Back alignment and structure |
|---|
Score = 118 bits (298), Expect = 2e-31
Identities = 42/182 (23%), Positives = 83/182 (45%), Gaps = 22/182 (12%)
Query: 292 DTSVILRMKQFRRMNKLKKLTIKVIVEYLP-DEETQALKEKFIEMDTDKNGTLSYDELRA 350
T + MK+F+ KL + + + L EET+ L + F ++D + +G L EL
Sbjct: 5 LTGALGNMKKFQSSQKLAQAAMLFMGSKLTTLEETKELTQIFRQLDNNGDGQLDRKELIE 64
Query: 351 GLTKV-----------GSMLTEFDVKHLMEAV--KNSSTLE-----SLCENLPTKE-KQK 391
G K+ S E +V H++++V + +E ++C + +++
Sbjct: 65 GYRKLMQWKGDTVSDLDSSQIEAEVDHILQSVDFDRNGYIEYSEFVTVCMDKQLLLSRER 124
Query: 392 LMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNL 451
L+ F++ D+D S +T EL +++ +Q ++ D + +G +D EFV +
Sbjct: 125 LLAAFQQFDSDGSGKITNEELGRLFGVTE--VDDETWHQVLQECDKNNDGEVDFEEFVEM 182
Query: 452 MT 453
M
Sbjct: 183 MQ 184
|
| >3khe_A Calmodulin-like domain protein kinase isoform 3; calcium dependent kinase, structural genomics, structural GE consortium, SGC, ATP-binding; 1.95A {Toxoplasma gondii} Length = 191 | Back alignment and structure |
|---|
Score = 93.1 bits (232), Expect = 2e-22
Identities = 33/107 (30%), Positives = 49/107 (45%), Gaps = 12/107 (11%)
Query: 382 ENLPTKE-KQKLMEKFREMDTDNSDTLTLSELKAGLAK-----------LGSALEESEVN 429
L T E ++L + FR++D + L EL G K L S+ E+EV+
Sbjct: 31 SKLTTLEETKELTQIFRQLDNNGDGQLDRKELIEGYRKLMQWKGDTVSDLDSSQIEAEVD 90
Query: 430 QYMEAGDIDGNGNIDSIEFVNLMTDIYKLETPELLEKAFQYLDKNSD 476
+++ D D NG I+ EFV + D L + E L AFQ D +
Sbjct: 91 HILQSVDFDRNGYIEYSEFVTVCMDKQLLLSRERLLAAFQQFDSDGS 137
|
| >3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} Length = 383 | Back alignment and structure |
|---|
Score = 122 bits (307), Expect = 6e-31
Identities = 69/345 (20%), Positives = 118/345 (34%), Gaps = 96/345 (27%)
Query: 18 YEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIR 77
E Y G+ LG G FG+ + + + +A K + + P+ + RE+ I
Sbjct: 2 LETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRYKN-------RELDIM 54
Query: 78 LYLSGQPNVVEFK--------------------------------------STYEDETAV 99
L N+++ +
Sbjct: 55 KVLD-HVNIIKLVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYL 113
Query: 100 HVVMELCEGGDLFDRIIAKGYNSERDAATVLRA------IVNAVNVCHSMGVMHRDLKPE 153
+V+ME L +++ K + + + + AV HS+G+ HRD+KP+
Sbjct: 114 NVIMEYVPD-TLH-KVL-KSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQ 170
Query: 154 NFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVL--RRRYGKEIDIWSA 211
N S+D+ LK+ DFGSA + + S FY APE++ Y ID+WS
Sbjct: 171 NLLVNSKDNT--LKLCDFGSAKKLIPSEPSVAYICSRFYRAPELMLGATEYTPSIDLWSI 228
Query: 212 GVILYILLSGVPPFWAETKKGTYDAILQGEIDFDT------DPWPSISST---------- 255
G + L+ G P F G +I Q + ++
Sbjct: 229 GCVFGELILGKPLF-----SGE-TSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLK 282
Query: 256 ---------------AKDLVRRMLTKDPKRRITAAQVLEHPWLRE 285
A DL+ ++L +P RI + + HP+
Sbjct: 283 AKDWRKILPEGTPSLAIDLLEQILRYEPDLRINPYEAMAHPFFDH 327
|
| >3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* Length = 351 | Back alignment and structure |
|---|
Score = 121 bits (305), Expect = 8e-31
Identities = 71/325 (21%), Positives = 119/325 (36%), Gaps = 100/325 (30%)
Query: 31 LGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAEND------MIRREIQIRLYLSGQP 84
+G+G FG + T + A K K+ + EN+ REI+I L
Sbjct: 25 IGQGTFGEVFKARHRKTGQKVALK------KVLM-ENEKEGFPITALREIKILQLLK-HE 76
Query: 85 NVVEFK--------STYEDETAVHVVMELCEGGDLFDRIIAKGYN-------SERDAATV 129
NVV + ++++V + CE DL G + + V
Sbjct: 77 NVVNLIEICRTKASPYNRCKGSIYLVFDFCEH-DL------AGLLSNVLVKFTLSEIKRV 129
Query: 130 LRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLF-----EEGQVYR 184
++ ++N + H ++HRD+K N + + +LK+ DFG A F + Y
Sbjct: 130 MQMLLNGLYYIHRNKILHRDMKAAN---VLITRDGVLKLADFGLARAFSLAKNSQPNRYT 186
Query: 185 DIVGSGFYIAPEVL--RRRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQG-- 240
+ V + +Y PE+L R YG ID+W AG I+ + + P I+QG
Sbjct: 187 NRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSP-------------IMQGNT 233
Query: 241 EID-----FDT------DPWPSISS----------------------------TAKDLVR 261
E + WP++ + A DL+
Sbjct: 234 EQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLID 293
Query: 262 RMLTKDPKRRITAAQVLEHPWLRES 286
++L DP +RI + L H +
Sbjct: 294 KLLVLDPAQRIDSDDALNHDFFWSD 318
|
| >3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* Length = 311 | Back alignment and structure |
|---|
Score = 119 bits (301), Expect = 1e-30
Identities = 70/269 (26%), Positives = 115/269 (42%), Gaps = 39/269 (14%)
Query: 25 YFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMI----RREIQIRLYL 80
Y G +LG G +L + +R A K + + LA + RRE Q L
Sbjct: 14 YELGEILGFGGMSEVHLARDLRDHRDVAVKVL----RADLARDPSFYLRFRREAQNAAAL 69
Query: 81 SGQPNVVEFKSTY---EDETAVHV----VMELCEGGDLFDRIIAKGYNSERDAATVLRAI 133
+ P +V + Y E ET VME +G L D + +G + + A V+
Sbjct: 70 N-HPAIV---AVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADA 125
Query: 134 VNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVY----RDIVGS 189
A+N H G++HRD+KP N IS + KV DFG A + ++G+
Sbjct: 126 CQALNFSHQNGIIHRDVKPANI-MISATNAV--KVMDFGIARAIADSGNSVTQTAAVIGT 182
Query: 190 GFYIAPEVLRRRY-GKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAI------LQGEI 242
Y++PE R D++S G +LY +L+G PPF ++ + ++ +
Sbjct: 183 AQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDS------PVSVAYQHVREDP 236
Query: 243 DFDTDPWPSISSTAKDLVRRMLTKDPKRR 271
+ +S+ +V + L K+P+ R
Sbjct: 237 IPPSARHEGLSADLDAVVLKALAKNPENR 265
|
| >2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681 | Back alignment and structure |
|---|
Score = 123 bits (311), Expect = 2e-30
Identities = 62/267 (23%), Positives = 104/267 (38%), Gaps = 39/267 (14%)
Query: 25 YFFGRMLGRGQFGVSYLCT-ENSTNRPYACKSIAKKPKMRLAEND----MIRREIQIRLY 79
Y + G G YL N RP K + + + M E Q
Sbjct: 82 YEVKGCIAHGGLGWIYLALDRNVNGRPVVLKG------LVHSGDAEAQAMAMAERQFLAE 135
Query: 80 LSGQPNVVE-----FKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIV 134
+ P++V+ + + ++VME G L +A L I+
Sbjct: 136 VV-HPSIVQIFNFVEHTDRHGDPVGYIVMEYVGGQSLKRSK--GQKLPVAEAIAYLLEIL 192
Query: 135 NAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSA-LLFEEGQVYRDIVGSGFYI 193
A++ HS+G+++ DLKPEN ++ + LK+ D G+ + G +Y G+ +
Sbjct: 193 PALSYLHSIGLVYNDLKPENI-MLTEEQ---LKLIDLGAVSRINSFGYLY----GTPGFQ 244
Query: 194 APEVLRRRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSIS 253
APE++R DI++ G L L +P G Y L + DP
Sbjct: 245 APEIVRTGPTVATDIYTVGRTLAALTLDLPTR-----NGRYVDGLP-----EDDPVLKTY 294
Query: 254 STAKDLVRRMLTKDPKRR-ITAAQVLE 279
+ L+RR + DP++R TA ++
Sbjct: 295 DSYGRLLRRAIDPDPRQRFTTAEEMSA 321
|
| >3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} Length = 405 | Back alignment and structure |
|---|
Score = 117 bits (294), Expect = 5e-29
Identities = 79/341 (23%), Positives = 121/341 (35%), Gaps = 92/341 (26%)
Query: 26 FFGRMLGRGQFGVSY--LCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQ 83
+ G +GRG +G Y + ++ YA K I + REI + L
Sbjct: 24 YEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEG-----TGISMSACREIALLRELK-H 77
Query: 84 PNVVEFKS--TYEDETAVHVVMELCEGGDL---FDRIIAKGYNSER---DAATV---LRA 132
PNV+ + + V ++ + E DL A N + V L
Sbjct: 78 PNVISLQKVFLSHADRKVWLLFDYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQ 136
Query: 133 IVNAVNVCHSMGVMHRDLKPENFSFISRDDNA--LLKVTDFGSALLF---------EEGQ 181
I++ ++ H+ V+HRDLKP N + + +K+ D G A LF +
Sbjct: 137 ILDGIHYLHANWVLHRDLKPANI-LVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPV 195
Query: 182 V----YRDIVGSGFYIAPEVL--RRRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYD 235
V YR APE+L R Y K IDIW+ G I LL+ P F +
Sbjct: 196 VVTFWYR---------APELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTS 246
Query: 236 AILQGE----IDFDT------DPWPSIS-------------------------------- 253
+ I F+ W I
Sbjct: 247 NPYHHDQLDRI-FNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVK 305
Query: 254 --STAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASDD 292
S A L++++LT DP +RIT+ Q ++ P+ E + D
Sbjct: 306 PDSKAFHLLQKLLTMDPIKRITSEQAMQDPYFLEDPLPTSD 346
|
| >3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* Length = 429 | Back alignment and structure |
|---|
Score = 117 bits (295), Expect = 6e-29
Identities = 72/320 (22%), Positives = 114/320 (35%), Gaps = 71/320 (22%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLS-----GQ 83
+++G+G FG ++ ++ A K + + + EI+I +L
Sbjct: 103 KVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQ----AAEEIRILEHLRKQDKDNT 158
Query: 84 PNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYN--SERDAATVLRAIVNAVNVCH 141
NV+ + + + EL +L++ I + S +I+ ++ H
Sbjct: 159 MNVIHMLENFTFRNHICMTFELL-SMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALH 217
Query: 142 SMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEV-LRR 200
++H DLKPEN + + + KV DFGS+ +E +VY I S FY APEV L
Sbjct: 218 KNRIIHCDLKPENILLKQQGRSGI-KVIDFGSSC-YEHQRVYTYIQ-SRFYRAPEVILGA 274
Query: 201 RYGKEIDIWSA---------GVILY------------ILLSGVPPFW---AETKKGTYDA 236
RYG ID+WS G L I L G+P A + + +
Sbjct: 275 RYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQKLLDASKRAKNFVS 334
Query: 237 ILQGEIDFDTDPWPSISSTAK-------------------------------DLVRRMLT 265
S D +++ L
Sbjct: 335 SKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLE 394
Query: 266 KDPKRRITAAQVLEHPWLRE 285
DP R+T Q L HPWLR
Sbjct: 395 WDPAVRMTPGQALRHPWLRR 414
|
| >3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} Length = 362 | Back alignment and structure |
|---|
Score = 115 bits (290), Expect = 9e-29
Identities = 73/358 (20%), Positives = 126/358 (35%), Gaps = 74/358 (20%)
Query: 20 DVMLHYFFGRMLGRGQFGVSYLCT-ENSTNRPYACKSIAKKPKMRLAEN------DMIR- 71
+ Y R + G +G +C +S P A K + N R
Sbjct: 19 AMQSPYTVQRFISSGSYGA--VCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRV 76
Query: 72 -REIQIRLYLSGQPNVVEFK-----STYEDETAVHVVMELCEGGDLFDRIIAKGYNSERD 125
REI++ L PN++ + +++V EL DL ++I + +R
Sbjct: 77 LREIRL-LNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRT-DL-AQVI----HDQRI 129
Query: 126 AAT----------VLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSAL 175
+ +L + +V H GV+HRDL P N I DN + + DF A
Sbjct: 130 VISPQHIQYFMYHILLGL----HVLHEAGVVHRDLHPGN---ILLADNNDITICDFNLAR 182
Query: 176 LFEEGQVYRDIVGSGFYIAPEVL--RRRYGKEIDIWSAGVILYILLSGVPPF-------- 225
V +Y APE++ + + K +D+WSAG ++ + + F
Sbjct: 183 EDTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQ 242
Query: 226 ----------------WAETKKGTYDAILQGEIDFDTDPW----PSISSTAKDLVRRMLT 265
+ D + + W P+ A DL+ +ML
Sbjct: 243 LNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLE 302
Query: 266 KDPKRRITAAQVLEHPWLRESGEASDDTSVILRMKQFRR----MNKLKKLTIKVIVEY 319
+P+RRI+ Q L HP+ + D T + F + + K+ + +
Sbjct: 303 FNPQRRISTEQALRHPYFESLFDPLDLTEGLSERFHFDESVTDVYDMHKIFTAEVERF 360
|
| >2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... Length = 371 | Back alignment and structure |
|---|
Score = 115 bits (290), Expect = 1e-28
Identities = 74/321 (23%), Positives = 123/321 (38%), Gaps = 73/321 (22%)
Query: 20 DVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDM----IRREIQ 75
V+ Y + +G G G+ + R A K + R +N RE+
Sbjct: 22 TVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKL-----SRPFQNQTHAKRAYRELV 76
Query: 76 IRLYLSGQPNVVEFK------STYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATV 129
+ + N++ + E+ V++VMEL + +L ++I + ER + +
Sbjct: 77 L-MKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDA-NL-CQVIQMELDHER-MSYL 132
Query: 130 LRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGS 189
L ++ + HS G++HRDLKP N I + LK+ DFG A + V +
Sbjct: 133 LYQMLCGIKHLHSAGIIHRDLKPSN---IVVKSDCTLKILDFGLARTAGTSFMMTPYVVT 189
Query: 190 GFYIAPEV-LRRRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDP 248
+Y APEV L Y + +DIWS G I+ ++ G F GT D I Q +
Sbjct: 190 RYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLF-----PGT-DHIDQWNKVIEQLG 243
Query: 249 WPS------ISSTAK--------------------------------------DLVRRML 264
P + T + DL+ +ML
Sbjct: 244 TPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKML 303
Query: 265 TKDPKRRITAAQVLEHPWLRE 285
D +RI+ + L+HP++
Sbjct: 304 VIDASKRISVDEALQHPYINV 324
|
| >3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* Length = 464 | Back alignment and structure |
|---|
Score = 116 bits (293), Expect = 1e-28
Identities = 74/321 (23%), Positives = 122/321 (38%), Gaps = 73/321 (22%)
Query: 20 DVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDM----IRREIQ 75
V+ Y + +G G G+ + +R A K + R +N RE+
Sbjct: 59 TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKL-----SRPFQNQTHAKRAYRELV 113
Query: 76 IRLYLSGQPNVVEFK------STYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATV 129
+ + N++ T E+ V++VMEL + +L ++I + ER + +
Sbjct: 114 L-MKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDA-NL-CQVIQMELDHER-MSYL 169
Query: 130 LRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGS 189
L ++ + HS G++HRDLKP N I + LK+ DFG A + V +
Sbjct: 170 LYQMLCGIKHLHSAGIIHRDLKPSN---IVVKSDCTLKILDFGLARTAGTSFMMTPYVVT 226
Query: 190 GFYIAPEV-LRRRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDP 248
+Y APEV L Y + +DIWS G I+ ++ F G D I Q +
Sbjct: 227 RYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILF-----PGR-DYIDQWNKVIEQLG 280
Query: 249 WPS------ISSTAK--------------------------------------DLVRRML 264
P + T + DL+ +ML
Sbjct: 281 TPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKML 340
Query: 265 TKDPKRRITAAQVLEHPWLRE 285
DP +RI+ L+HP++
Sbjct: 341 VIDPAKRISVDDALQHPYINV 361
|
| >3sjs_A URE3-BP sequence specific DNA binding protein; EF-hand, structural genomics, seattle S genomics center for infectious disease, ssgcid; 1.90A {Entamoeba histolytica} PDB: 3sia_A 3sib_A Length = 220 | Back alignment and structure |
|---|
Score = 111 bits (280), Expect = 1e-28
Identities = 30/188 (15%), Positives = 62/188 (32%), Gaps = 13/188 (6%)
Query: 292 DTSVILRMKQFRRMNKLKKLTIKVIVEYLPDEETQALKEKFIEMDTDKNGTLSYDELRAG 351
S + ++ ++ ++ +P ++ + + F+ +D D++GTL +EL G
Sbjct: 17 QGSWMGAACIYQMPPSVRNTWWFPLLNTIPLDQYTRIYQWFMGVDRDRSGTLEINELMMG 76
Query: 352 LTKVGSMLTEFDVKHLMEA--VKNSSTLESLCE--NLPTKEKQKLMEKFREMDTDNSDTL 407
G L+ +M + + S E + K + F S TL
Sbjct: 77 QFPGGIRLSPQTALRMMRIFDTDFNGHI-SFYEFMAM-YKFMELAYNLFVMNARARSGTL 134
Query: 408 TLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIYKLETPELLEKA 467
E+ L +LG + + G D ++ + A
Sbjct: 135 EPHEILPALQQLGFYINQRTSLLLHRL-FARGMAFCDLNCWIAICAFA------AQTRSA 187
Query: 468 FQYLDKNS 475
+Q + N
Sbjct: 188 YQMIFMNP 195
|
| >3sjs_A URE3-BP sequence specific DNA binding protein; EF-hand, structural genomics, seattle S genomics center for infectious disease, ssgcid; 1.90A {Entamoeba histolytica} PDB: 3sia_A 3sib_A Length = 220 | Back alignment and structure |
|---|
Score = 82.5 bits (204), Expect = 3e-18
Identities = 24/103 (23%), Positives = 40/103 (38%), Gaps = 6/103 (5%)
Query: 374 SSTLESLCENLPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYME 433
++ L +P + ++ + F +D D S TL ++EL G G L + M
Sbjct: 35 NTWWFPLLNTIPLDQYTRIYQWFMGVDRDRSGTLEINELMMGQFPGGIRLSPQTALRMMR 94
Query: 434 AGDIDGNGNIDSIEFVNLMTDIYKLETPELLEKAFQYLDKNSD 476
D D NG+I EF+ + + EL F +
Sbjct: 95 IFDTDFNGHISFYEFMAMYKFM------ELAYNLFVMNARARS 131
|
| >3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3o71_A 3r63_A 3c9w_A* 2y9q_A* 3sa0_A* 1wzy_A* 2e14_A* 1tvo_A* 2ojg_A* 2oji_A* ... Length = 364 | Back alignment and structure |
|---|
Score = 114 bits (288), Expect = 2e-28
Identities = 83/330 (25%), Positives = 129/330 (39%), Gaps = 67/330 (20%)
Query: 4 SVSKNQRDPILGKAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMR 63
+ + + + G+ ++ V Y +G G +G+ +N A K K+
Sbjct: 9 AAAAAGPEMVRGQVFD-VGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIK------KIS 61
Query: 64 LAENDM----IRREIQIRLYLSGQPNVVEFK-----STYEDETAVHVVMELCEGGDLFDR 114
E+ REI+I L N++ T E V++V +L E DL +
Sbjct: 62 PFEHQTYCQRTLREIKILLRFR-HENIIGINDIIRAPTIEQMKDVYIVQDLMET-DL-YK 118
Query: 115 IIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSA 174
++ + S L I+ + HS V+HRDLKP N + + LK+ DFG A
Sbjct: 119 LLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSN---LLLNTTCDLKICDFGLA 175
Query: 175 LLFEEGQVYRDI----VGSGFYIAPEVL--RRRYGKEIDIWSAGVILYILLSGVPPFWAE 228
+ + + V + +Y APE++ + Y K IDIWS G IL +LS P F
Sbjct: 176 RVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF--- 232
Query: 229 TKKGTYDAILQGEIDFDT-----------------------------DPW----PSISST 255
G + Q PW P+ S
Sbjct: 233 --PGK-HYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSK 289
Query: 256 AKDLVRRMLTKDPKRRITAAQVLEHPWLRE 285
A DL+ +MLT +P +RI Q L HP+L +
Sbjct: 290 ALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 319
|
| >1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 Length = 367 | Back alignment and structure |
|---|
Score = 114 bits (287), Expect = 3e-28
Identities = 76/355 (21%), Positives = 143/355 (40%), Gaps = 56/355 (15%)
Query: 20 DVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDM----IRREIQ 75
+V Y + +G G +G + T A K + R ++++ RE++
Sbjct: 22 EVRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKL-----YRPFQSELFAKRAYRELR 76
Query: 76 IRLYLSGQPNVVEFK------STYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATV 129
+ L NV+ T +D T ++VM DL +++ E +
Sbjct: 77 L-LKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFMGT-DL-GKLMKHEKLGEDRIQFL 133
Query: 130 LRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGS 189
+ ++ + H+ G++HRDLKP N ++ +++ LK+ DFG A + V +
Sbjct: 134 VYQMLKGLRYIHAAGIIHRDLKPGN---LAVNEDCELKILDFGLARQADSEMT--GYVVT 188
Query: 190 GFYIAPEVL--RRRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQ-------G 240
+Y APEV+ RY + +DIWS G I+ +++G F I++
Sbjct: 189 RWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAE 248
Query: 241 EIDFDTDP--------------------WPSISSTAKDLVRRMLTKDPKRRITAAQVLEH 280
+ + S A +L+ +ML D ++R+TA + L H
Sbjct: 249 FVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAH 308
Query: 281 PWLRESGEASDDTSVILRMKQF----RRMNKLKKLTIKVIVEYLPDEETQALKEK 331
P+ + D+ V F R +++ K++T K ++ + P + A K
Sbjct: 309 PYFESLHDTEDEPQVQKYDDSFDDVDRTLDEWKRVTYKEVLSFKPPRQLGARVSK 363
|
| >2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} Length = 320 | Back alignment and structure |
|---|
Score = 112 bits (283), Expect = 5e-28
Identities = 66/319 (20%), Positives = 125/319 (39%), Gaps = 68/319 (21%)
Query: 20 DVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIR--REIQ-- 75
D+ Y + LG G G+ + +N ++ A K I + REI+
Sbjct: 8 DLGSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQ-----SVKHALREIKII 62
Query: 76 --------IRLY---LSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSER 124
++++ + + + + +V++V E E DL ++ +G E
Sbjct: 63 RRLDHDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMET-DL-ANVLEQGPLLEE 120
Query: 125 DAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYR 184
A + ++ + HS V+HRDLKP N + ++ +LK+ DFG A + + ++
Sbjct: 121 HARLFMYQLLRGLKYIHSANVLHRDLKPANLFINT--EDLVLKIGDFGLARIMDPHYSHK 178
Query: 185 DI----VGSGFYIAPEVL--RRRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAIL 238
+ + +Y +P +L Y K ID+W+AG I +L+G F G +
Sbjct: 179 GHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLF-----AGA-HELE 232
Query: 239 QGEIDFDTDPWPS------ISSTAK--------------------------DLVRRMLTK 266
Q ++ ++ P + S D + ++LT
Sbjct: 233 QMQLILESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTF 292
Query: 267 DPKRRITAAQVLEHPWLRE 285
P R+TA + L HP++
Sbjct: 293 SPMDRLTAEEALSHPYMSI 311
|
| >3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 112 bits (282), Expect = 1e-27
Identities = 77/346 (22%), Positives = 140/346 (40%), Gaps = 58/346 (16%)
Query: 20 DVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDM----IRREIQ 75
++ Y +G G +G + + A K + R ++++ RE+
Sbjct: 21 ELPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKL-----SRPFQSEIFAKRAYRELL 75
Query: 76 IRLYLSGQPNVVEFK------STYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATV 129
+ L NV+ S+ + ++VM + DL +I+ ++ E+ +
Sbjct: 76 L-LKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQT-DL-QKIMGLKFSEEK-IQYL 131
Query: 130 LRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGS 189
+ ++ + HS GV+HRDLKP N ++ +++ LK+ DFG A + V +
Sbjct: 132 VYQMLKGLKYIHSAGVVHRDLKPGN---LAVNEDCELKILDFGLARHADAEMT--GYVVT 186
Query: 190 GFYIAPEVL--RRRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQ-------G 240
+Y APEV+ Y + +DIWS G I+ +L+G F + IL+
Sbjct: 187 RWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTE 246
Query: 241 EIDFDTDP--------------------WPSISSTAKDLVRRMLTKDPKRRITAAQVLEH 280
+ D +P S A DL+ +ML D +R+TAAQ L H
Sbjct: 247 FVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH 306
Query: 281 PWLRESGEASDDTSVILRM-----KQFRRMNKLKKLTIKVIVEYLP 321
P+ + ++T + +++ K+ K IV + P
Sbjct: 307 PFFEPFRDPEEETEAQQPFDDSLEHEKLTVDEWKQHIYKEIVNFSP 352
|
| >2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A* Length = 355 | Back alignment and structure |
|---|
Score = 112 bits (282), Expect = 1e-27
Identities = 72/326 (22%), Positives = 108/326 (33%), Gaps = 80/326 (24%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPY-ACKSIAKKPKMRLAENDMIRREIQIRLYL-----SG 82
LG G FG C +++ + A K I K R A R EI + +
Sbjct: 25 GNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAA----RLEINVLKKIKEKDKEN 80
Query: 83 QPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYN--SERDAATVLRAIVNAVNVC 140
+ V + + + EL G + F+ + + + + +A+
Sbjct: 81 KFLCVLMSDWFNFHGHMCIAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFL 139
Query: 141 HSMGVMHRDLKPENFSFISRD----------------DNALLKVTDFGSALLFEEGQVYR 184
H + H DLKPEN F++ + N ++V DFGSA F+
Sbjct: 140 HENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSA-TFDHEHHTT 198
Query: 185 DIVGSGFYIAPEV-LRRRYGKEIDIWSAGVILYILLSGVPPFWAET-------------- 229
IV + Y PEV L + + D+WS G IL+ G F
Sbjct: 199 -IVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMMEKILGP 257
Query: 230 ------KKGTYDAILQGEIDFDTDPWPSISSTAK------------------------DL 259
+ Q W SS + DL
Sbjct: 258 IPSHMIHRTRK----QKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDL 313
Query: 260 VRRMLTKDPKRRITAAQVLEHPWLRE 285
+RRML DP +RIT A+ L HP+
Sbjct: 314 MRRMLEFDPAQRITLAEALLHPFFAG 339
|
| >2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... Length = 367 | Back alignment and structure |
|---|
Score = 112 bits (281), Expect = 2e-27
Identities = 78/374 (20%), Positives = 144/374 (38%), Gaps = 63/374 (16%)
Query: 6 SKNQRDP------ILGKAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKK 59
+Q P + +E V Y +G G +G + T A K ++
Sbjct: 7 HHSQERPTFYRQELNKTIWE-VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-- 63
Query: 60 PKMRLAENDM----IRREIQIRLYLSGQPNVVEFK------STYEDETAVHVVMELCEGG 109
R ++ + RE+++ ++ NV+ + E+ V++V L
Sbjct: 64 ---RPFQSIIHAKRTYRELRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLMGA- 118
Query: 110 DLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVT 169
DL + I+ ++ ++ I+ + HS ++HRDLKP N ++ +++ LK+
Sbjct: 119 DL-NNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSN---LAVNEDCELKIL 174
Query: 170 DFGSALLFEEGQVYRDIVGSGFYIAPEVL--RRRYGKEIDIWSAGVILYILLSGVPPFWA 227
DFG A + V + +Y APE++ Y + +DIWS G I+ LL+G F
Sbjct: 175 DFGLARHTADEMT--GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 232
Query: 228 ETKKGTYDAILQ-------GEIDFDTDP--------------------WPSISSTAKDLV 260
IL+ + + + + A DL+
Sbjct: 233 TDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLL 292
Query: 261 RRMLTKDPKRRITAAQVLEHPWLRESGEASDDTSVILRMKQFRR----MNKLKKLTIKVI 316
+ML D +RITAAQ L H + + + D+ + +++ K LT +
Sbjct: 293 EKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVADPYDQSLESRDLLIDEWKSLTYDEV 352
Query: 317 VEYLPDEETQALKE 330
+ ++P Q E
Sbjct: 353 ISFVPPPLDQEEME 366
|
| >3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A Length = 286 | Back alignment and structure |
|---|
Score = 110 bits (276), Expect = 2e-27
Identities = 38/260 (14%), Positives = 67/260 (25%), Gaps = 39/260 (15%)
Query: 25 YFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQI--RLYLSG 82
Y G + + + +R A + + + R+
Sbjct: 33 YRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRI---D 89
Query: 83 QPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHS 142
+P V VV E GG L + +A S A ++++ A + H
Sbjct: 90 KPGVARVLDVVHTRAGGLVVAEWIRGGSLQE--VADTSPSPVGAIRAMQSLAAAADAAHR 147
Query: 143 MGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLRRRY 202
GV P +S D + + + +
Sbjct: 148 AGVALSIDHPSRV-RVSIDGDV--VLAYPA-------------------TMPDANPQD-- 183
Query: 203 GKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPW---PSISSTAKDL 259
DI G LY LL P + + +P I +
Sbjct: 184 ----DIRGIGASLYALLVNRWPLPEAGVRSGLAPAERDTAGQPIEPADIDRDIPFQISAV 239
Query: 260 VRRMLTKDPKRRITAAQVLE 279
R + D R +A+ +L
Sbjct: 240 AARSVQGDGGIR-SASTLLN 258
|
| >2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* Length = 382 | Back alignment and structure |
|---|
Score = 110 bits (277), Expect = 8e-27
Identities = 66/335 (19%), Positives = 117/335 (34%), Gaps = 78/335 (23%)
Query: 24 HYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLS-- 81
Y ++G+G FG + A K I K + E+++ ++
Sbjct: 55 RYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQ----AQIEVRLLELMNKH 110
Query: 82 ---GQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYN--SERDAATVLRAIVNA 136
+ +V K + + +V E+ +L+D + + S + + A
Sbjct: 111 DTEMKYYIVHLKRHFMFRNHLCLVFEML-SYNLYDLLRNTNFRGVSLNLTRKFAQQMCTA 169
Query: 137 VNVCHS--MGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIA 194
+ + + ++H DLKPEN + +A+ K+ DFGS+ ++Y+ I S FY +
Sbjct: 170 LLFLATPELSIIHCDLKPENILLCNPKRSAI-KIVDFGSSC-QLGQRIYQYIQ-SRFYRS 226
Query: 195 PEV-LRRRYGKEIDIWSA---------GVILY------------ILLSGVPPFW------ 226
PEV L Y ID+WS G L+ + + G+PP
Sbjct: 227 PEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPPAHILDQAP 286
Query: 227 ----------------------AETKKGTYDAILQGEIDFDTDPWPSISSTA-------- 256
K L + +T +
Sbjct: 287 KARKFFEKLPDGTWNLKKTKDGKREYKPPGTRKLHNILGVETGGPGGRRAGESGHTVADY 346
Query: 257 ---KDLVRRMLTKDPKRRITAAQVLEHPWLRESGE 288
KDL+ RML DPK RI L+H + +++ +
Sbjct: 347 LKFKDLILRMLDYDPKTRIQPYYALQHSFFKKTAD 381
|
| >1s6i_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5 Length = 188 | Back alignment and structure |
|---|
Score = 105 bits (264), Expect = 1e-26
Identities = 54/176 (30%), Positives = 86/176 (48%), Gaps = 18/176 (10%)
Query: 318 EYLPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAV--KNSS 375
E L +EE LKE F +DTD +GT+++DEL+ GL +VGS L E ++K LM+A S
Sbjct: 2 ERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSG 61
Query: 376 TLE-----SLCENLPTKE-KQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVN 429
T++ + +L E ++ L+ F D D S +TL E++ G L++ ++
Sbjct: 62 TIDYGEFIAATVHLNKLEREENLVSAFSYFDKDGSGYITLDEIQQACKDFG--LDDIHID 119
Query: 430 QYMEAGDIDGNGNIDSIEFVNLMTDIYK--------LETPELLEKAFQYLDKNSDQ 477
++ D D +G ID EF +M + L A +D S+Q
Sbjct: 120 DMIKEIDQDNDGQIDYGEFAAMMRKRKGNGGIGRRTMRKTLNLRDALGLVDNGSNQ 175
|
| >1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A* Length = 339 | Back alignment and structure |
|---|
Score = 109 bits (274), Expect = 1e-26
Identities = 77/325 (23%), Positives = 114/325 (35%), Gaps = 80/325 (24%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPY-ACKSIAKKPKMRLAENDMIRREIQIRLYL-----SG 82
LG G FG C ++ + A K + + A R EIQ+ +L +
Sbjct: 20 DTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEA----ARSEIQVLEHLNTTDPNS 75
Query: 83 QPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYN--SERDAATVLRAIVNAVNVC 140
V+ +E + +V EL G +D I G+ + I +VN
Sbjct: 76 TFRCVQMLEWFEHHGHICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFL 134
Query: 141 HSMGVMHRDLKPENFSFISRD----------------DNALLKVTDFGSALLFEEGQVYR 184
HS + H DLKPEN F+ D N +KV DFGSA +++
Sbjct: 135 HSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSA-TYDDEHHST 193
Query: 185 DIVGSGFYIAPEV-LRRRYGKEIDIWSAGVILYILLSGVPPFWAET-------------- 229
+V + Y APEV L + + D+WS G IL G F
Sbjct: 194 -LVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMERILGP 252
Query: 230 ------KKGTYDAILQGEIDFDTDPWPSISSTAK------------------------DL 259
+K + D W SS + DL
Sbjct: 253 LPKHMIQKTRK----RKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDL 308
Query: 260 VRRMLTKDPKRRITAAQVLEHPWLR 284
+++ML DP +RIT + L+HP+
Sbjct: 309 IQKMLEYDPAKRITLREALKHPFFD 333
|
| >2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* Length = 353 | Back alignment and structure |
|---|
Score = 109 bits (274), Expect = 1e-26
Identities = 83/322 (25%), Positives = 124/322 (38%), Gaps = 74/322 (22%)
Query: 20 DVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDM----IRREIQ 75
++ + +LG G +GV T T A K K+ + + REI+
Sbjct: 8 NISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIK------KIEPFDKPLFALRTLREIK 61
Query: 76 IRLYLSGQPNVVEFK-----STYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVL 130
I + N++ ++E+ V+++ EL + DL R+I+ S+ +
Sbjct: 62 ILKHFK-HENIITIFNIQRPDSFENFNEVYIIQELMQT-DL-HRVISTQMLSDDHIQYFI 118
Query: 131 RAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSA--LLFEEGQVYRDIVG 188
+ AV V H V+HRDLKP N + + N LKV DFG A +
Sbjct: 119 YQTLRAVKVLHGSNVIHRDLKPSN---LLINSNCDLKVCDFGLARIIDESAADNSEPTGQ 175
Query: 189 SGF---------YIAPEVL--RRRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAI 237
Y APEV+ +Y + +D+WS G IL L P F G D
Sbjct: 176 QSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIF-----PGR-DYR 229
Query: 238 LQ--------GEIDFDTD----------------------PW----PSISSTAKDLVRRM 263
Q G D D P P ++ DL++RM
Sbjct: 230 HQLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRM 289
Query: 264 LTKDPKRRITAAQVLEHPWLRE 285
L DP +RITA + LEHP+L+
Sbjct: 290 LVFDPAKRITAKEALEHPYLQT 311
|
| >2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307 | Back alignment and structure |
|---|
Score = 106 bits (266), Expect = 7e-26
Identities = 63/267 (23%), Positives = 110/267 (41%), Gaps = 32/267 (11%)
Query: 26 FFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPN 85
++GRG FGV + A K I + E E++ ++ PN
Sbjct: 11 EVEEVVGRGAFGVVCKAKWR--AKDVAIKQIESES-----ERKAFIVELRQLSRVN-HPN 62
Query: 86 VVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRA---IVNAVNVCHS 142
+V+ + V +VME EGG L++ + AA + V HS
Sbjct: 63 IVKLYGACLN--PVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHS 120
Query: 143 M---GVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLR 199
M ++HRDLKP N + +LK+ DFG+A + + GS ++APEV
Sbjct: 121 MQPKALIHRDLKPPNL-LLV-AGGTVLKICDFGTAC--DIQTHMTNNKGSAAWMAPEVFE 176
Query: 200 -RRYGKEIDIWSAGVILYILLSGVPPFW--AETKKGTYDAILQG---EIDFDTDPWPSIS 253
Y ++ D++S G+IL+ +++ PF A+ G + +
Sbjct: 177 GSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPLIKNLPKP---- 232
Query: 254 STAKDLVRRMLTKDPKRRITAAQVLEH 280
+ L+ R +KDP +R + ++++
Sbjct: 233 --IESLMTRCWSKDPSQRPSMEEIVKI 257
|
| >3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7} Length = 360 | Back alignment and structure |
|---|
Score = 107 bits (269), Expect = 8e-26
Identities = 71/330 (21%), Positives = 109/330 (33%), Gaps = 86/330 (26%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQP---- 84
R +G G FG LC + YA K + K + + E I +
Sbjct: 41 RKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYTRSA----KIEADILKKIQNDDINNN 96
Query: 85 NVVEFKST--YEDETAVHV--VMELCEGGDLFDRIIAKGYN--SERDAATVLRAIVNAVN 138
N+V++ Y D H+ + E G L++ I YN D I+ A+N
Sbjct: 97 NIVKYHGKFMYYD----HMCLIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALN 151
Query: 139 VCHSMGVMHRDLKPEN----------------------FSFISRDDNALLKVTDFGSALL 176
M + H DLKPEN I R + +K+ DFG A
Sbjct: 152 YLRKMSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCAT- 210
Query: 177 FEEGQVYRDIVGSGFYIAPEV-LRRRYGKEIDIWSAGVILYILLSGV------------- 222
F+ I + Y APEV L + D+WS G +L L +G
Sbjct: 211 FKSDYHGSIIN-TRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFRTHEHMEHLA 269
Query: 223 --------PPFW-----AETKKGTYDAILQGEIDFDTDPWPSISSTA------------- 256
P +T Y + ++ + + S
Sbjct: 270 MMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIKH 329
Query: 257 ---KDLVRRMLTKDPKRRITAAQVLEHPWL 283
D + +L DP R + A++L+H +L
Sbjct: 330 ELFCDFLYSILQIDPTLRPSPAELLKHKFL 359
|
| >4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287 | Back alignment and structure |
|---|
Score = 105 bits (263), Expect = 1e-25
Identities = 53/275 (19%), Positives = 109/275 (39%), Gaps = 33/275 (12%)
Query: 26 FFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKP----KMRLAENDMIRREIQIRLYLS 81
+ + +G+G FG+ + A KS+ + + +RE+ I +S
Sbjct: 22 EYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI---MS 78
Query: 82 G--QPNVVEFK--STYEDETAVHVVMELCEGGDLFDRIIAKGYN-SERDAATVLRAIVNA 136
PN+V+ +VME GDL+ R++ K + ++ I
Sbjct: 79 NLNHPNIVKLYGLMH----NPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALG 134
Query: 137 VNVCHSMG--VMHRDLKPEN--FSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFY 192
+ + ++HRDL+ N + + KV DFG + + ++G+ +
Sbjct: 135 IEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLS--QQSVHSVSGLLGNFQW 192
Query: 193 IAPEVLRRR---YGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPW 249
+APE + Y ++ D +S +ILY +L+G PF + + +
Sbjct: 193 MAPETIGAEEESYTEKADTYSFAMILYTILTGEGPF--DEYSYGKIKFINMIREEGLR-- 248
Query: 250 PSISSTA----KDLVRRMLTKDPKRRITAAQVLEH 280
P+I ++++ + DPK+R + +++
Sbjct: 249 PTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKE 283
|
| >3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} Length = 388 | Back alignment and structure |
|---|
Score = 107 bits (268), Expect = 1e-25
Identities = 77/396 (19%), Positives = 138/396 (34%), Gaps = 89/396 (22%)
Query: 15 GKAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDM----I 70
G+ V+ Y + LG+G +G+ + + T A K I +N
Sbjct: 1 GRVDRHVLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKI-----FDAFQNSTDAQRT 55
Query: 71 RREIQIRLYLSGQPNVVEFKS--TYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAAT 128
REI I LSG N+V + +++ V++V + E DL +I
Sbjct: 56 FREIMILTELSGHENIVNLLNVLRADNDRDVYLVFDYMET-DL-HAVIRANILEPVHKQY 113
Query: 129 VLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVG 188
V+ ++ + HS G++HRD+KP N I + +KV DFG + F + + +
Sbjct: 114 VVYQLIKVIKYLHSGGLLHRDMKPSN---ILLNAECHVKVADFGLSRSFVNIRRVTNNIP 170
Query: 189 SGF----------------------YIAPEVL--RRRYGKEIDIWSAGVILYILLSG--- 221
Y APE+L +Y K ID+WS G IL +L G
Sbjct: 171 LSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPI 230
Query: 222 ---------------------------------------VPPFWAETKKGTYDAILQGEI 242
+ + D + +
Sbjct: 231 FPGSSTMNQLERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKN 290
Query: 243 DFDT-DPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRE----SGEASDDTSVIL 297
+P + A DL+ ++L +P +RI+A L+HP++ + E + D + +
Sbjct: 291 LLLKINPKADCNEEALDLLDKLLQFNPNKRISANDALKHPFVSIFHNPNEEPNCDHIITI 350
Query: 298 RMKQFRRMNK--LKKLTIKVIVEYLPDEETQALKEK 331
+ + + + L I + + +
Sbjct: 351 PINDNVKHSIDDYRNLVYSEISRRKRELISNKHQNV 386
|
| >3e3r_A Calcyphosin, calcyphosine; human calcyphosine, EF-hand, phosphoprotein, calcium binding; 2.65A {Homo sapiens} Length = 204 | Back alignment and structure |
|---|
Score = 102 bits (255), Expect = 3e-25
Identities = 32/186 (17%), Positives = 67/186 (36%), Gaps = 21/186 (11%)
Query: 286 SGEASDDTSVILRMKQFRRMNKLKKLTIKVIVEYLPDEETQALKEKFIEMDTDKNGTLSY 345
SG M KL+ + Q L F ++D D + +L
Sbjct: 2 SGLVPRGPLGSHMDAVDATMEKLRAQCLSRGAS-----GIQGLARFFRQLDRDGSRSLDA 56
Query: 346 DELRAGLTKVGSMLTEFDVKHLMEAV-KNSST-------LESLCENLPTKEKQKLMEKFR 397
DE R GL K+G +L + + + + +N S L +L + + + F
Sbjct: 57 DEFRQGLAKLGLVLDQAEAEGVCRKWDRNGSGTLDLEEFLRALRPPMSQAREAVIAAAFA 116
Query: 398 EMDTDNSDTLTLSELKAGL-------AKLGSALEESEVNQYM-EAGDIDGNGNIDSIEFV 449
++D +T+ +L+ + G E+ + +++ + +G + EF
Sbjct: 117 KLDRSGDGVVTVDDLRGVYSGRAHPKVRSGEWTEDEVLRRFLDNFDSSEKDGQVTLAEFQ 176
Query: 450 NLMTDI 455
+ + +
Sbjct: 177 DYYSGV 182
|
| >3e3r_A Calcyphosin, calcyphosine; human calcyphosine, EF-hand, phosphoprotein, calcium binding; 2.65A {Homo sapiens} Length = 204 | Back alignment and structure |
|---|
Score = 95.5 bits (238), Expect = 5e-23
Identities = 32/113 (28%), Positives = 52/113 (46%), Gaps = 6/113 (5%)
Query: 364 VKHLMEAVKNSSTLESLCENLPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSAL 423
V ME ++ + C + Q L FR++D D S +L E + GLAKLG L
Sbjct: 17 VDATMEKLR------AQCLSRGASGIQGLARFFRQLDRDGSRSLDADEFRQGLAKLGLVL 70
Query: 424 EESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIYKLETPELLEKAFQYLDKNSD 476
+++E D +G+G +D EF+ + ++ AF LD++ D
Sbjct: 71 DQAEAEGVCRKWDRNGSGTLDLEEFLRALRPPMSQAREAVIAAAFAKLDRSGD 123
|
| >3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310 | Back alignment and structure |
|---|
Score = 104 bits (262), Expect = 3e-25
Identities = 48/217 (22%), Positives = 93/217 (42%), Gaps = 24/217 (11%)
Query: 26 FFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPN 85
G +LG+G FG + T T K + + + +E+++ L PN
Sbjct: 13 IHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRT---FLKEVKVMRCLE-HPN 68
Query: 86 VVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYN-SERDAATVLRAIVNAVNVCHSMG 144
V++F + ++ + E +GG L I + + + I + + HSM
Sbjct: 69 VLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMN 128
Query: 145 VMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRD---------------IVGS 189
++HRDL N +N + V DFG A L + + + +VG+
Sbjct: 129 IIHRDLNSHN---CLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGN 185
Query: 190 GFYIAPEVLR-RRYGKEIDIWSAGVILYILLSGVPPF 225
+++APE++ R Y +++D++S G++L ++ V
Sbjct: 186 PYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNAD 222
|
| >2f2o_A Calmodulin fused with calmodulin-binding domain of calcineurin; EF-hands, calcium, metal binding protein; 2.17A {Bos taurus} PDB: 2f2p_A Length = 179 | Back alignment and structure |
|---|
Score = 100 bits (252), Expect = 4e-25
Identities = 42/174 (24%), Positives = 79/174 (45%), Gaps = 13/174 (7%)
Query: 316 IVEYLPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVK--N 373
+ + L +E+ KE F D D +GT++ EL + +G TE +++ ++ V
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 374 SSTL--ESLCENLPTKEKQK-----LMEKFREMDTDNSDTLTLSELKAGLAKLGSALEES 426
+ T+ + K K + E FR D D + ++ +EL+ + LG L +
Sbjct: 61 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE 120
Query: 427 EVNQYMEAGDIDGNGNIDSIEFVNLMT----DIYKLETPELLEKAFQYLDKNSD 476
EV++ + DIDG+G ++ EFV +MT E++ + + K +
Sbjct: 121 EVDEMIREADIDGDGQVNYEEFVQMMTAKGGGGGAAARKEVIRNKIRAIGKMAR 174
|
| >3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} Length = 458 | Back alignment and structure |
|---|
Score = 106 bits (265), Expect = 7e-25
Identities = 84/429 (19%), Positives = 141/429 (32%), Gaps = 118/429 (27%)
Query: 4 SVSKNQRDPILGKAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMR 63
S P ++ + Y ++G G +G + R A K K+
Sbjct: 35 SSKPTASMPRPHSDWQ-IPDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIK------KIL 87
Query: 64 LAENDMI---R--REIQIRLYLSGQPNVVEFK-----STYEDETAVHVVMELCEGGDLFD 113
D+I R REI I L+ +VV+ E ++VV+E+ + D
Sbjct: 88 RVFEDLIDCKRILREIAILNRLN-HDHVVKVLDIVIPKDVEKFDELYVVLEIADS-DF-K 144
Query: 114 RIIAKGYN-SERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFG 172
++ +E T+L ++ V HS G++HRDLKP N + + +KV DFG
Sbjct: 145 KLFRTPVYLTELHIKTLLYNLLVGVKYVHSAGILHRDLKPAN---CLVNQDCSVKVCDFG 201
Query: 173 SALLFEEGQVYRDIVGSGF----------------------------YIAPEVL--RRRY 202
A + + + Y APE++ + Y
Sbjct: 202 LARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENY 261
Query: 203 GKEIDIWSAGVIL-------------------------YILLSGVPPFWAETKKGTYDAI 237
+ ID+WS G I LS + K T
Sbjct: 262 TEAIDVWSIGCIFAELLNMIKENVAYHADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNR 321
Query: 238 LQGEIDFDT------DPWPSISST---------------------------AKDLVRRML 264
Q + F+ + ++ A L++RML
Sbjct: 322 DQLNVIFNILGTPSEEDIEALEKEDAKRYIRIFPKREGTDLAERFPASSADAIHLLKRML 381
Query: 265 TKDPKRRITAAQVLEHPWLRE----SGEASDDTSVILRMKQFRRMNK--LKKLTIKVIVE 318
+P +RIT + L HP+ +E E + V L + M++ L+ +K I
Sbjct: 382 VFNPNKRITINECLAHPFFKEVRIAEVETNATEKVRLPFNDWMNMDEPQLRYAFVKEIQR 441
Query: 319 YLPDEETQA 327
Y P+ +
Sbjct: 442 YHPEIQLPR 450
|
| >3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309 | Back alignment and structure |
|---|
Score = 102 bits (255), Expect = 2e-24
Identities = 51/212 (24%), Positives = 84/212 (39%), Gaps = 24/212 (11%)
Query: 26 FFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQ-- 83
+G G FG + + + A K + + + RE+ I +
Sbjct: 40 NIKEKIGAGSFGTVHRAEWHGS--DVAVKIL-MEQDFHAERVNEFLREVAI---MKRLRH 93
Query: 84 PNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVC--- 140
PN+V F + +V E G L+ + G + D L A +V
Sbjct: 94 PNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSM---AYDVAKGM 150
Query: 141 ---HSMG--VMHRDLKPENFSFISRDDNALLKVTDFG-SALLFEEGQVYRDIVGSGFYIA 194
H+ ++HR+LK N + D +KV DFG S L + G+ ++A
Sbjct: 151 NYLHNRNPPIVHRNLKSPN---LLVDKKYTVKVCDFGLSRLKASTFLSSKSAAGTPEWMA 207
Query: 195 PEVLR-RRYGKEIDIWSAGVILYILLSGVPPF 225
PEVLR ++ D++S GVIL+ L + P+
Sbjct: 208 PEVLRDEPSNEKSDVYSFGVILWELATLQQPW 239
|
| >1dtl_A Cardiac troponin C; helix-turn-helix, structural protein; HET: BEP; 2.15A {Gallus gallus} SCOP: a.39.1.5 PDB: 1j1d_A 1j1e_A 2jt3_A 2jt0_A 1la0_A 2jtz_A* 2jt8_A* 2kfx_T* 1wrk_A* 1wrl_A* 1ap4_A 1lxf_C* 1mxl_C 1spy_A 2krd_C* 2l1r_A* 3rv5_A* 2ctn_A 2kgb_C 2jxl_A ... Length = 161 | Back alignment and structure |
|---|
Score = 96.9 bits (242), Expect = 6e-24
Identities = 39/164 (23%), Positives = 75/164 (45%), Gaps = 17/164 (10%)
Query: 305 MNKLKKLTIKVIVEYLPDEETQALKEKFIEMDTD-KNGTLSYDELRAGLTKVGSMLTEFD 363
M+ + K VE L +E+ K F ++G++S EL + +G T +
Sbjct: 1 MDDIYK----AAVEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEE 56
Query: 364 VKHLMEAV--KNSSTLE----------SLCENLPTKEKQKLMEKFREMDTDNSDTLTLSE 411
++ +++ V S T++ S+ ++ K +++L + FR D + + L E
Sbjct: 57 LQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMFDKNADGYIDLEE 116
Query: 412 LKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDI 455
LK L G + E ++ + M+ GD + +G ID EF+ M +
Sbjct: 117 LKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMKGV 160
|
| >1dtl_A Cardiac troponin C; helix-turn-helix, structural protein; HET: BEP; 2.15A {Gallus gallus} SCOP: a.39.1.5 PDB: 1j1d_A 1j1e_A 2jt3_A 2jt0_A 1la0_A 2jtz_A* 2jt8_A* 2kfx_T* 1wrk_A* 1wrl_A* 1ap4_A 1lxf_C* 1mxl_C 1spy_A 2krd_C* 2l1r_A* 3rv5_A* 2ctn_A 2kgb_C 2jxl_A ... Length = 161 | Back alignment and structure |
|---|
Score = 76.4 bits (189), Expect = 9e-17
Identities = 26/100 (26%), Positives = 45/100 (45%), Gaps = 5/100 (5%)
Query: 382 ENLPTKEKQKLMEKFREMDTDNSD-TLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGN 440
E L ++K + F D +++ EL + LG E+ + ++ D DG+
Sbjct: 10 EQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGS 69
Query: 441 GNIDSIEFVNLMTDIYK----LETPELLEKAFQYLDKNSD 476
G +D EF+ +M K ++ E L F+ DKN+D
Sbjct: 70 GTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMFDKNAD 109
|
| >3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271 | Back alignment and structure |
|---|
Score = 99.3 bits (248), Expect = 1e-23
Identities = 55/210 (26%), Positives = 89/210 (42%), Gaps = 15/210 (7%)
Query: 26 FFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAEN-DMIRREIQIRLYLSGQP 84
++G G FG Y A K+ P +++ + +R+E ++ L P
Sbjct: 10 TLEEIIGIGGFGKVYRAFWIGD--EVAVKAARHDPDEDISQTIENVRQEAKLFAMLK-HP 66
Query: 85 NVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMG 144
N++ + E + +VME GG L +++ I +N H
Sbjct: 67 NIIALRGVCLKEPNLCLVMEFARGGPLNR-VLSGKRIPPDILVNWAVQIARGMNYLHDEA 125
Query: 145 ---VMHRDLKPEN-----FSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPE 196
++HRDLK N N +LK+TDFG A + G+ ++APE
Sbjct: 126 IVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTT-KMSAAGAYAWMAPE 184
Query: 197 VLR-RRYGKEIDIWSAGVILYILLSGVPPF 225
V+R + K D+WS GV+L+ LL+G PF
Sbjct: 185 VIRASMFSKGSDVWSYGVLLWELLTGEVPF 214
|
| >3fwb_A Cell division control protein 31; gene gating, complex, cell cycle, cell division, mitosis, MR transport, nuclear pore complex, nucleus, phosphoprotein; 2.50A {Saccharomyces cerevisiae} PDB: 2gv5_A 2doq_A 3fwc_A Length = 161 | Back alignment and structure |
|---|
Score = 94.5 bits (236), Expect = 4e-23
Identities = 36/160 (22%), Positives = 74/160 (46%), Gaps = 10/160 (6%)
Query: 305 MNKLKK-LTIKVIVEYLPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFD 363
M+K + L + L +E+ Q + E F D + +G L Y EL+ + +G L + +
Sbjct: 1 MSKNRSSLQSGPLNSELLEEQKQEIYEAFSLFDMNNDGFLDYHELKVAMKALGFELPKRE 60
Query: 364 VKHLMEAVKNSST--------LESLCENLPTKEKQK-LMEKFREMDTDNSDTLTLSELKA 414
+ L++ + + E + ++ + F+ D D++ +++ L+
Sbjct: 61 ILDLIDEYDSEGRHLMKYDDFYIVMGEKILKRDPLDEIKRAFQLFDDDHTGKISIKNLRR 120
Query: 415 GLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTD 454
+LG L + E+ +E D+DG+G I+ EF+ + TD
Sbjct: 121 VAKELGETLTDEELRAMIEEFDLDGDGEINENEFIAICTD 160
|
| >3fwb_A Cell division control protein 31; gene gating, complex, cell cycle, cell division, mitosis, MR transport, nuclear pore complex, nucleus, phosphoprotein; 2.50A {Saccharomyces cerevisiae} PDB: 2gv5_A 2doq_A 3fwc_A Length = 161 | Back alignment and structure |
|---|
Score = 81.8 bits (203), Expect = 1e-18
Identities = 28/110 (25%), Positives = 51/110 (46%), Gaps = 1/110 (0%)
Query: 368 MEAVKNSSTLESLCENLPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESE 427
M ++S L L ++KQ++ E F D +N L ELK + LG L + E
Sbjct: 1 MSKNRSSLQSGPLNSELLEEQKQEIYEAFSLFDMNNDGFLDYHELKVAMKALGFELPKRE 60
Query: 428 VNQYMEAGDIDGNGNIDSIEFVNLMTD-IYKLETPELLEKAFQYLDKNSD 476
+ ++ D +G + +F +M + I K + + +++AFQ D +
Sbjct: 61 ILDLIDEYDSEGRHLMKYDDFYIVMGEKILKRDPLDEIKRAFQLFDDDHT 110
|
| >1qv0_A Obelin, OBL; photoprotein, bioluminescence, atomic resolution, Ca binding, EF-hand, luminescent protein; HET: CZH; 1.10A {Obelia longissima} SCOP: a.39.1.5 PDB: 1qv1_A* 1sl9_A* 1el4_A* 2f8p_A* 1sl7_A 1jf2_A* 1s36_A* 1jf0_A* 3kpx_A* Length = 195 | Back alignment and structure |
|---|
Score = 95.6 bits (238), Expect = 5e-23
Identities = 33/183 (18%), Positives = 60/183 (32%), Gaps = 29/183 (15%)
Query: 309 KKLTIKVIVEYLPDEETQALKEKFIEMDTDKNGTLSYDELRAG-----LTKVGSMLTEFD 363
K +K+ ++ + K F +D + NG ++ DE+ + K+ + +
Sbjct: 3 SKYAVKLKTDFDNPRWIKRHKHMFDFLDINGNGKITLDEIVSKASDDICAKLEATPEQTK 62
Query: 364 VKHLMEAV------------------------KNSSTLESLCENLPTKEKQKLMEKFREM 399
+ +S L+ N PT ++ F
Sbjct: 63 RHQVCVEAFFRGCGMEYGKEIAFPQFLDGWKQLATSELKKWARNEPTLIREWGDAVFDIF 122
Query: 400 DTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIYKLE 459
D D S T+TL E KA G + + + D+D G++D E +
Sbjct: 123 DKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDNAGDLDVDEMTRQHLGFWYTL 182
Query: 460 TPE 462
PE
Sbjct: 183 DPE 185
|
| >1qv0_A Obelin, OBL; photoprotein, bioluminescence, atomic resolution, Ca binding, EF-hand, luminescent protein; HET: CZH; 1.10A {Obelia longissima} SCOP: a.39.1.5 PDB: 1qv1_A* 1sl9_A* 1el4_A* 2f8p_A* 1sl7_A 1jf2_A* 1s36_A* 1jf0_A* 3kpx_A* Length = 195 | Back alignment and structure |
|---|
Score = 69.4 bits (170), Expect = 5e-14
Identities = 19/116 (16%), Positives = 40/116 (34%), Gaps = 21/116 (18%)
Query: 382 ENLPTKEKQKLMEKFREMDTDNSDTLTLSELKAG-----LAKLGSALEESEVNQYMEAGD 436
+ + ++ F +D + + +TL E+ + AKL + E+++ +Q
Sbjct: 12 DFDNPRWIKRHKHMFDFLDINGNGKITLDEIVSKASDDICAKLEATPEQTKRHQVCVEAF 71
Query: 437 IDGNG-----NIDSIEFVNLMTDIYKLE-----------TPELLEKAFQYLDKNSD 476
G G I +F++ + E E + F DK+
Sbjct: 72 FRGCGMEYGKEIAFPQFLDGWKQLATSELKKWARNEPTLIREWGDAVFDIFDKDGS 127
|
| >1top_A Troponin C; contractIle system protein; 1.78A {Gallus gallus} SCOP: a.39.1.5 PDB: 1ncy_A 1ncz_A 1ncx_A 1ytz_C* 1yv0_C 1tnw_A 1tnx_A 5tnc_A 2w49_0 2w4u_0 4tnc_A 1a2x_A 1tcf_A 1tn4_A 2tn4_A 1aj4_A 1jc2_A 1fi5_A 1sbj_A 1scv_A ... Length = 162 | Back alignment and structure |
|---|
Score = 93.8 bits (234), Expect = 7e-23
Identities = 35/148 (23%), Positives = 63/148 (42%), Gaps = 12/148 (8%)
Query: 318 EYLPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVK--NSS 375
+L +E K F D D G +S EL + +G T+ ++ ++E V S
Sbjct: 12 AFLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSG 71
Query: 376 TLE----------SLCENLPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEE 425
T++ + E+ K +++L FR D + + + EL L G + E
Sbjct: 72 TIDFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVTE 131
Query: 426 SEVNQYMEAGDIDGNGNIDSIEFVNLMT 453
++ M+ D + +G ID EF+ +M
Sbjct: 132 EDIEDLMKDSDKNNDGRIDFDEFLKMME 159
|
| >1top_A Troponin C; contractIle system protein; 1.78A {Gallus gallus} SCOP: a.39.1.5 PDB: 1ncy_A 1ncz_A 1ncx_A 1ytz_C* 1yv0_C 1tnw_A 1tnx_A 5tnc_A 2w49_0 2w4u_0 4tnc_A 1a2x_A 1tcf_A 1tn4_A 2tn4_A 1aj4_A 1jc2_A 1fi5_A 1sbj_A 1scv_A ... Length = 162 | Back alignment and structure |
|---|
Score = 78.8 bits (195), Expect = 2e-17
Identities = 27/99 (27%), Positives = 42/99 (42%), Gaps = 4/99 (4%)
Query: 382 ENLPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNG 441
L + + F D D ++ EL + LG + E++ +E D DG+G
Sbjct: 12 AFLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSG 71
Query: 442 NIDSIEFVNLMTDIYKLETP----ELLEKAFQYLDKNSD 476
ID EF+ +M K + E L F+ DKN+D
Sbjct: 72 TIDFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNAD 110
|
| >3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271 | Back alignment and structure |
|---|
Score = 96.5 bits (241), Expect = 9e-23
Identities = 32/214 (14%), Positives = 74/214 (34%), Gaps = 29/214 (13%)
Query: 26 FFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPN 85
F L G + K + K ++ E S PN
Sbjct: 13 NFLTKLNENHSGELWKGRWQ--GNDIVVK-VLKVRDWSTRKSRDFNEECPRLRIFS-HPN 68
Query: 86 VVEFK--STYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVC--- 140
V+ ++ G L++ ++ +G N D + ++ A+++
Sbjct: 69 VLPVLGACQSPPAPHPTLITHWMPYGSLYN-VLHEGTNFVVDQSQAVKF---ALDMARGM 124
Query: 141 ---HSMG--VMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAP 195
H++ + L + + D++ +++ F+ + + ++AP
Sbjct: 125 AFLHTLEPLIPRHALNSRS---VMIDEDMTARISMADVKFSFQSPGR----MYAPAWVAP 177
Query: 196 EVLRRR----YGKEIDIWSAGVILYILLSGVPPF 225
E L+++ + D+WS V+L+ L++ PF
Sbjct: 178 EALQKKPEDTNRRSADMWSFAVLLWELVTREVPF 211
|
| >1y1x_A Leishmania major homolog of programmed cell death protein; SGPP, structural genomics, PSI; 1.95A {Leishmania major} SCOP: a.39.1.8 Length = 191 | Back alignment and structure |
|---|
Score = 94.3 bits (235), Expect = 1e-22
Identities = 37/160 (23%), Positives = 63/160 (39%), Gaps = 10/160 (6%)
Query: 320 LPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAV-KNSSTLE 378
+ Q L E F +DTD +G +S EL A L+ G + + L+ KN S
Sbjct: 21 RHMNDNQELMEWFRAVDTDGSGAISVPELNAALSSAGVPFSLATTEKLLHMYDKNHSGEI 80
Query: 379 SLCE--NLPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGD 436
+ E +L + E FR+ D+ L +E++A L G + E M D
Sbjct: 81 TFDEFKDL-HHFILSMREGFRKRDSSGDGRLDSNEVRAALLSSGYQVSEQTFQALMRKFD 139
Query: 437 IDGNGNIDSIEFVNLMTDIYKLETPELLEKAFQYLDKNSD 476
G++ ++V L + + + F + D+
Sbjct: 140 RQRRGSLGFDDYVELSIFVCR------VRNVFAFYDRERT 173
|
| >1y1x_A Leishmania major homolog of programmed cell death protein; SGPP, structural genomics, PSI; 1.95A {Leishmania major} SCOP: a.39.1.8 Length = 191 | Back alignment and structure |
|---|
Score = 72.7 bits (179), Expect = 4e-15
Identities = 25/94 (26%), Positives = 42/94 (44%), Gaps = 6/94 (6%)
Query: 383 NLPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGN 442
+ Q+LME FR +DTD S +++ EL A L+ G + + + D + +G
Sbjct: 20 ARHMNDNQELMEWFRAVDTDGSGAISVPELNAALSSAGVPFSLATTEKLLHMYDKNHSGE 79
Query: 443 IDSIEFVNLMTDIYKLETPELLEKAFQYLDKNSD 476
I EF +L I + + F+ D + D
Sbjct: 80 ITFDEFKDLHHFILS------MREGFRKRDSSGD 107
|
| >1y1x_A Leishmania major homolog of programmed cell death protein; SGPP, structural genomics, PSI; 1.95A {Leishmania major} SCOP: a.39.1.8 Length = 191 | Back alignment and structure |
|---|
Score = 44.6 bits (106), Expect = 2e-05
Identities = 17/92 (18%), Positives = 34/92 (36%), Gaps = 12/92 (13%)
Query: 326 QALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNSSTLE------- 378
+++E F + D+ +G L +E+RA L G ++E + LM
Sbjct: 93 LSMREGFRKRDSSGDGRLDSNEVRAALLSSGYQVSEQTFQALMRKFDRQRRGSLGFDDYV 152
Query: 379 SLCENLPTKEKQKLMEKFREMDTDNSDTLTLS 410
L ++ F D + + +T +
Sbjct: 153 ELS-----IFVCRVRNVFAFYDRERTGQVTFT 179
|
| >3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301 | Back alignment and structure |
|---|
Score = 95.9 bits (239), Expect = 3e-22
Identities = 52/296 (17%), Positives = 111/296 (37%), Gaps = 55/296 (18%)
Query: 27 FGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQI-RLYLSGQPN 85
+G+G++G + + + +++A K + RE ++ + N
Sbjct: 12 LLECVGKGRYGEVWRGS-------WQGENVAVK-IFSSRDEKSWFRETELYNTVMLRHEN 63
Query: 86 VVEF----KSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCH 141
++ F ++ T + ++ E G L+D + ++ +I + + H
Sbjct: 64 ILGFIASDMTSRHSSTQLWLITHYHEMGSLYD-YLQLTTLDTVSCLRIVLSIASGLAHLH 122
Query: 142 S--------MGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDI-----VG 188
+ HRDLK +N I N + D G A++ + D+ VG
Sbjct: 123 IEIFGTQGKPAIAHRDLKSKN---ILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVG 179
Query: 189 SGFYIAPEVLR-------RRYGKEIDIWSAGVILYILLSGVPPFW-AETKKGTYDAILQG 240
+ Y+APEVL K +DIW+ G++L+ + + E K + ++
Sbjct: 180 TKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPN 239
Query: 241 EIDFDT---------------DPWPSISSTA--KDLVRRMLTKDPKRRITAAQVLE 279
+ F+ + W S + L++ ++P R+TA ++ +
Sbjct: 240 DPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKK 295
|
| >3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* Length = 432 | Back alignment and structure |
|---|
Score = 97.5 bits (243), Expect = 4e-22
Identities = 83/399 (20%), Positives = 139/399 (34%), Gaps = 107/399 (26%)
Query: 20 DVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDM----IRREIQ 75
V +Y ++GRG +G YL + +T + A K + R+ E+ + I REI
Sbjct: 23 HVPDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKV-----NRMFEDLIDCKRILREIT 77
Query: 76 IRLYLSGQPNVVEFK-----STYEDETAVHVVMELCEGGDLFDRIIAKGYN-SERDAATV 129
I L ++ +++V+E+ + DL ++ +E T+
Sbjct: 78 ILNRLK-SDYIIRLYDLIIPDDLLKFDELYIVLEIADS-DL-KKLFKTPIFLTEEHIKTI 134
Query: 130 LRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSA--------------L 175
L ++ N H G++HRDLKP N + + +KV DFG A L
Sbjct: 135 LYNLLLGENFIHESGIIHRDLKPAN---CLLNQDCSVKVCDFGLARTINSEKDTNIVNDL 191
Query: 176 LFEEGQVYRDIVGSGF---------YIAPEVL--RRRYGKEIDIWSAGVILYILLSG--- 221
E + Y APE++ + Y K IDIWS G I LL+
Sbjct: 192 EENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQS 251
Query: 222 -------------------VPPFWAETKKGTYDAILQGEIDFDTDPWPS-------ISST 255
+ P K Q I F+ P+
Sbjct: 252 HINDPTNRFPLFPGSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLKNINKPE 311
Query: 256 AKD--------------------------LVRRMLTKDPKRRITAAQVLEHPWLRE---- 285
L+ ML +P +RIT Q L+HP+L++
Sbjct: 312 VIKYIKLFPHRKPINLKQKYPSISDDGINLLESMLKFNPNKRITIDQALDHPYLKDVRKK 371
Query: 286 SGEASDDTSVILRMKQFRRMNK--LKKLTIKVIVEYLPD 322
E +IL + +++ L+ + +K + + P+
Sbjct: 372 KLENFSTKKIILPFDDWMVLSETQLRYIFLKEVQSFHPE 410
|
| >2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319 | Back alignment and structure |
|---|
Score = 95.9 bits (239), Expect = 4e-22
Identities = 56/277 (20%), Positives = 105/277 (37%), Gaps = 38/277 (13%)
Query: 26 FFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQI--RLYLSGQ 83
G ++G+G+FG Y + A + I + + +RE+ +
Sbjct: 36 EIGELIGKGRFGQVYHGRWHGE---VAIRLI-DIERDNEDQLKAFKREVMAYRQTR---H 88
Query: 84 PNVVEFKSTYEDETAVHVVMELCEGGDLFDRI-IAKGYNSERDAATVLRAIVNAVNVCHS 142
NVV F + ++ LC+G L+ + AK + + IV + H+
Sbjct: 89 ENVVLFMGACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHA 148
Query: 143 MGVMHRDLKPENFSFISRDDNALLKVTDFGSA------LLFEEGQVYRDIVGSGFYIAPE 196
G++H+DLK +N F DN + +TDFG R G ++APE
Sbjct: 149 KGILHKDLKSKNV-FY---DNGKVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPE 204
Query: 197 VLRRR----------YGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFD- 245
++R+ + K D+++ G I Y L + PF K +AI+ +
Sbjct: 205 IIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPF----KTQPAEAIIWQ-MGTGM 259
Query: 246 --TDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEH 280
+ D++ + + R T ++++
Sbjct: 260 KPNLSQIGMGKEISDILLFCWAFEQEERPTFTKLMDM 296
|
| >3cs1_A Flagellar calcium-binding protein; myristoylated, palmitoylated, SEN membrane targeting, EF-hand, cell projection, cilium; 2.00A {Trypanosoma cruzi} Length = 219 | Back alignment and structure |
|---|
Score = 93.4 bits (232), Expect = 5e-22
Identities = 34/191 (17%), Positives = 69/191 (36%), Gaps = 23/191 (12%)
Query: 286 SGEASDDTSVILRMKQFRRMNKLKKLTIKVIVEYLPDEETQALKEKFIEM----DTDKNG 341
G + L + + K +K + I + +P E+T K++ IE+ D ++ G
Sbjct: 4 CGSKGSTSDKGLASDKDGKKAKDRKEAWERIRQAIPREKTAEAKQRRIELFKKFDKNETG 63
Query: 342 TLSYDELRAGLTK-VGSMLTEFDVKHLMEAVKNSSTLES----------------LCENL 384
L YDE+ +G + + V+ + + + S L
Sbjct: 64 KLCYDEVYSGCLEVLKLDEFTSRVRDITKRAFDKSRTLGSKLENKGSEDFVEFLEFRLML 123
Query: 385 P-TKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGS-ALEESEVNQYMEAGDIDGNGN 442
+ +L F E+D + + E K + KL + + + + D +G G+
Sbjct: 124 CYIYDFFELTVMFDEIDASGNMLVDEEEFKRAVPKLEAWGAKVEDPAALFKELDKNGTGS 183
Query: 443 IDSIEFVNLMT 453
+ EF +
Sbjct: 184 VTFDEFAAWAS 194
|
| >3cs1_A Flagellar calcium-binding protein; myristoylated, palmitoylated, SEN membrane targeting, EF-hand, cell projection, cilium; 2.00A {Trypanosoma cruzi} Length = 219 | Back alignment and structure |
|---|
Score = 81.1 bits (200), Expect = 8e-18
Identities = 22/126 (17%), Positives = 47/126 (37%), Gaps = 14/126 (11%)
Query: 365 KHLMEAVKNSSTLESLCENLPT----KEKQKLMEKFREMDTDNSDTLTLSELKAGLAK-L 419
K +A E + + +P + KQ+ +E F++ D + + L E+ +G + L
Sbjct: 19 KDGKKAKDRKEAWERIRQAIPREKTAEAKQRRIELFKKFDKNETGKLCYDEVYSGCLEVL 78
Query: 420 GSALEESEVNQYME---------AGDIDGNGNIDSIEFVNLMTDIYKLETPELLEKAFQY 470
S V + ++ G+ D +EF+ + + L F
Sbjct: 79 KLDEFTSRVRDITKRAFDKSRTLGSKLENKGSEDFVEFLEFRLMLCYIYDFFELTVMFDE 138
Query: 471 LDKNSD 476
+D + +
Sbjct: 139 IDASGN 144
|
| >3qrx_A Centrin; calcium-binding, EF-hand, cell division, calcium binding, ME binding protein-toxin complex; 2.20A {Chlamydomonas reinhardtii} PDB: 2ggm_A 2ami_A 1zmz_A Length = 169 | Back alignment and structure |
|---|
Score = 89.9 bits (224), Expect = 2e-21
Identities = 39/164 (23%), Positives = 77/164 (46%), Gaps = 9/164 (5%)
Query: 299 MKQFRRMNKLKKLTIKVIVEYLPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSM 358
M + + K L +E+ Q ++E F DTD +GT+ EL+ + +G
Sbjct: 1 MSYKAKTVVSARRDQKKGRVGLTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFE 60
Query: 359 LTEFDVKHLMEAV--KNSST------LESLCENLPTKEKQK-LMEKFREMDTDNSDTLTL 409
+ ++K ++ + S T L + + ++ ++ +++ FR D DNS T+T+
Sbjct: 61 PKKEEIKKMISEIDKDGSGTIDFEEFLTMMTAKMGERDSREEILKAFRLFDDDNSGTITI 120
Query: 410 SELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMT 453
+L+ +LG L E E+ + + D + + ID EF+ +M
Sbjct: 121 KDLRRVAKELGENLTEEELQEMIAEADRNDDNEIDEDEFIRIMK 164
|
| >3qrx_A Centrin; calcium-binding, EF-hand, cell division, calcium binding, ME binding protein-toxin complex; 2.20A {Chlamydomonas reinhardtii} PDB: 2ggm_A 2ami_A 1zmz_A Length = 169 | Back alignment and structure |
|---|
Score = 79.9 bits (198), Expect = 7e-18
Identities = 31/94 (32%), Positives = 53/94 (56%), Gaps = 1/94 (1%)
Query: 384 LPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNI 443
L ++KQ++ E F DTD S T+ ELK + LG ++ E+ + + D DG+G I
Sbjct: 22 LTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTI 81
Query: 444 DSIEFVNLMTD-IYKLETPELLEKAFQYLDKNSD 476
D EF+ +MT + + ++ E + KAF+ D ++
Sbjct: 82 DFEEFLTMMTAKMGERDSREEILKAFRLFDDDNS 115
|
| >1exr_A Calmodulin; high resolution, disorder, metal transport; 1.00A {Paramecium tetraurelia} SCOP: a.39.1.5 PDB: 1n0y_A 1osa_A 1clm_A 1mxe_A 2bbm_A 2bbn_A 4cln_A 4djc_A 2wel_D* 2x51_B 2vas_B* 2bkh_B 3gn4_B 3l9i_C 2ygg_B* 2w73_A 1lvc_D* 1wrz_A 2bki_B 2r28_A ... Length = 148 | Back alignment and structure |
|---|
Score = 89.1 bits (222), Expect = 3e-21
Identities = 41/145 (28%), Positives = 75/145 (51%), Gaps = 9/145 (6%)
Query: 318 EYLPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVK--NSS 375
E L +E+ KE F D D +GT++ EL + +G TE +++ ++ V +
Sbjct: 2 EQLTEEQIAEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 61
Query: 376 TL---ESLC----ENLPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEV 428
T+ E L + +++L+E F+ D D + ++ +EL+ + LG L + EV
Sbjct: 62 TIDFPEFLSLMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEV 121
Query: 429 NQYMEAGDIDGNGNIDSIEFVNLMT 453
++ + DIDG+G+I+ EFV +M
Sbjct: 122 DEMIREADIDGDGHINYEEFVRMMV 146
|
| >1exr_A Calmodulin; high resolution, disorder, metal transport; 1.00A {Paramecium tetraurelia} SCOP: a.39.1.5 PDB: 1n0y_A 1osa_A 1clm_A 1mxe_A 2bbm_A 2bbn_A 4cln_A 4djc_A 2wel_D* 2x51_B 2vas_B* 2bkh_B 3gn4_B 3l9i_C 2ygg_B* 2w73_A 1lvc_D* 1wrz_A 2bki_B 2r28_A ... Length = 148 | Back alignment and structure |
|---|
Score = 74.1 bits (183), Expect = 6e-16
Identities = 31/96 (32%), Positives = 48/96 (50%), Gaps = 1/96 (1%)
Query: 382 ENLPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNG 441
E L ++ + E F D D T+T EL + LG E+E+ + D DGNG
Sbjct: 2 EQLTEEQIAEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 61
Query: 442 NIDSIEFVNLMTDIYK-LETPELLEKAFQYLDKNSD 476
ID EF++LM K ++ E L +AF+ D++ +
Sbjct: 62 TIDFPEFLSLMARKMKEQDSEEELIEAFKVFDRDGN 97
|
| >2jnf_A Troponin C; stretch activated muscle contraction, EF-hand, metal binding protein; NMR {Lethocerus indicus} PDB: 2k2a_A Length = 158 | Back alignment and structure |
|---|
Score = 89.2 bits (222), Expect = 3e-21
Identities = 33/151 (21%), Positives = 71/151 (47%), Gaps = 14/151 (9%)
Query: 317 VEYLPDEETQALKEKFIEMDT-DKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAV--KN 373
V L + + L+ F + +T + +G +S D++ L +G T+ ++ L++
Sbjct: 4 VSKLSSNQVKLLETAFRDFETPEGSGRVSTDQIGIILEVLGIQQTKSTIRQLIDEFDPFG 63
Query: 374 SSTLE-----------SLCENLPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSA 422
+ ++ E P + +Q+L E FR D + + ++ ++ LA+L
Sbjct: 64 NGDIDFDSFKIIGARFLGEEVNPEQMQQELREAFRLYDKEGNGYISTDVMREILAELDET 123
Query: 423 LEESEVNQYMEAGDIDGNGNIDSIEFVNLMT 453
L +++ ++ D DG+G +D EF+ +MT
Sbjct: 124 LSSEDLDAMIDEIDADGSGTVDFEEFMGVMT 154
|
| >2jnf_A Troponin C; stretch activated muscle contraction, EF-hand, metal binding protein; NMR {Lethocerus indicus} PDB: 2k2a_A Length = 158 | Back alignment and structure |
|---|
Score = 76.1 bits (188), Expect = 1e-16
Identities = 22/101 (21%), Positives = 44/101 (43%), Gaps = 6/101 (5%)
Query: 382 ENLPTKEKQKLMEKFREMDTDNSD-TLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGN 440
L + + + L FR+ +T ++ ++ L LG +S + Q ++ D GN
Sbjct: 5 SKLSSNQVKLLETAFRDFETPEGSGRVSTDQIGIILEVLGIQQTKSTIRQLIDEFDPFGN 64
Query: 441 GNIDSIEFVNLMT-----DIYKLETPELLEKAFQYLDKNSD 476
G+ID F + ++ + + L +AF+ DK +
Sbjct: 65 GDIDFDSFKIIGARFLGEEVNPEQMQQELREAFRLYDKEGN 105
|
| >1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342 | Back alignment and structure |
|---|
Score = 92.9 bits (231), Expect = 5e-21
Identities = 52/297 (17%), Positives = 101/297 (34%), Gaps = 55/297 (18%)
Query: 26 FFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQI-RLYLSGQP 84
+G+G+FG + + + +A K E RE +I + +
Sbjct: 45 VLQESIGKGRFGEVWRGK-------WRGEEVAVK-IFSSREERSWFREAEIYQTVMLRHE 96
Query: 85 NVVEF----KSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVC 140
N++ F T + +V + E G LFD + + + + + + +
Sbjct: 97 NILGFIAADNKDNGTWTQLWLVSDYHEHGSLFD-YLNRYTVTVEGMIKLALSTASGLAHL 155
Query: 141 HS--------MGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDI-----V 187
H + HRDLK +N I N + D G A+ + DI V
Sbjct: 156 HMEIVGTQGKPAIAHRDLKSKN---ILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRV 212
Query: 188 GSGFYIAPEVLR-------RRYGKEIDIWSAGVILYILLSGV----------PPFWAETK 230
G+ Y+APEVL K DI++ G++ + + P++
Sbjct: 213 GTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVP 272
Query: 231 KGTYDAILQGEIDFDT------DPWPSISSTA--KDLVRRMLTKDPKRRITAAQVLE 279
++ + + W S + ++R + R+TA ++ +
Sbjct: 273 SDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKK 329
|
| >1jfj_A Ehcabp, calcium-binding protein; EF-hand, helix-loop-helix, metal binding protein; NMR {Entamoeba histolytica} SCOP: a.39.1.5 PDB: 1jfk_A 2nxq_A 3px1_A 3qjk_A 2jnx_A 2i18_A Length = 134 | Back alignment and structure |
|---|
Score = 87.2 bits (217), Expect = 8e-21
Identities = 28/136 (20%), Positives = 62/136 (45%), Gaps = 15/136 (11%)
Query: 328 LKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAV--KNSSTLE------- 378
+ F E+D + +G +SY+E++A ++K ++ E ++ + +++ + ++
Sbjct: 2 AEALFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKF 61
Query: 379 --SLCENLPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGD 436
S+ + +K L ++ MD D LT E+ + K G +V + + D
Sbjct: 62 YGSIQGQDLSDDKIGLKVLYKLMDVDGDGKLTKEEVTSFFKKHG----IEKVAEQVMKAD 117
Query: 437 IDGNGNIDSIEFVNLM 452
+G+G I EF+
Sbjct: 118 ANGDGYITLEEFLEFS 133
|
| >1jfj_A Ehcabp, calcium-binding protein; EF-hand, helix-loop-helix, metal binding protein; NMR {Entamoeba histolytica} SCOP: a.39.1.5 PDB: 1jfk_A 2nxq_A 3px1_A 3qjk_A 2jnx_A 2i18_A Length = 134 | Back alignment and structure |
|---|
Score = 85.3 bits (212), Expect = 4e-20
Identities = 21/88 (23%), Positives = 39/88 (44%), Gaps = 3/88 (3%)
Query: 392 LMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNL 451
F+E+D + ++ E+KA ++K + E + ++ D DGNG ID EF
Sbjct: 2 AEALFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKF 61
Query: 452 MTDIYK---LETPELLEKAFQYLDKNSD 476
I + L+ ++ +D + D
Sbjct: 62 YGSIQGQDLSDDKIGLKVLYKLMDVDGD 89
|
| >2znd_A Programmed cell death protein 6; penta-EF-hand protein, calcium binding protein, apoptosis, calcium, endoplasmic reticulum, membrane, nucleus; 1.70A {Homo sapiens} PDB: 2zn9_A 2zn8_A 1hqv_A 3aak_A 2zne_A 2zrs_A 2zrt_A 3aaj_A Length = 172 | Back alignment and structure |
|---|
Score = 87.7 bits (218), Expect = 1e-20
Identities = 34/164 (20%), Positives = 58/164 (35%), Gaps = 19/164 (11%)
Query: 321 PDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSM-LTEFDVKHLMEAVK--NSSTL 377
+ L F +D D++G +S EL+ L+ V+ ++ N + +
Sbjct: 2 ALPDQSFLWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGV 61
Query: 378 E-----SLCENLPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYM 432
+ K FR D DNS + +ELK L+ G L + + +
Sbjct: 62 NFSEFTGV-----WKYITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILI 116
Query: 433 EAGDIDGNGNIDSIEFVNLMTDIYKLETPELLEKAFQYLDKNSD 476
D G G I +F+ L+ L F+ D + D
Sbjct: 117 RKFDRQGRGQIAFDDFIQGCI---VLQR---LTDIFRRYDTDQD 154
|
| >2znd_A Programmed cell death protein 6; penta-EF-hand protein, calcium binding protein, apoptosis, calcium, endoplasmic reticulum, membrane, nucleus; 1.70A {Homo sapiens} PDB: 2zn9_A 2zn8_A 1hqv_A 3aak_A 2zne_A 2zrs_A 2zrt_A 3aaj_A Length = 172 | Back alignment and structure |
|---|
Score = 47.6 bits (114), Expect = 1e-06
Identities = 20/93 (21%), Positives = 34/93 (36%), Gaps = 12/93 (12%)
Query: 326 QALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNSSTLE------- 378
+ F D D +G + +EL+ L+ G L++ L+ +
Sbjct: 74 TDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDFI 133
Query: 379 SLCENLPTKEKQKLMEKFREMDTDNSDTLTLSE 411
C L Q+L + FR DTD + +S
Sbjct: 134 QGCIVL-----QRLTDIFRRYDTDQDGWIQVSY 161
|
| >3ox6_A Calcium-binding protein 1; EF-hand, calcium-sensor; 2.40A {Homo sapiens} PDB: 3ox5_A 2lan_A 2lap_A 2k7b_A 2k7c_A 2k7d_A Length = 153 | Back alignment and structure |
|---|
Score = 86.4 bits (215), Expect = 2e-20
Identities = 39/152 (25%), Positives = 73/152 (48%), Gaps = 14/152 (9%)
Query: 316 IVEYLPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVK--N 373
+ L EE + L+E F E D DK+G ++ +L + +G M TE ++ L + +
Sbjct: 1 MDRSLRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNL 60
Query: 374 SSTLE-----------SLCENLPTKEKQKLMEKFREMDTDNSDTLTLSELKAGL-AKLGS 421
++ L E ++L + FRE DT+ ++ SEL+ + A LG
Sbjct: 61 GGHVDFDDFVELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRALLGH 120
Query: 422 ALEESEVNQYMEAGDIDGNGNIDSIEFVNLMT 453
+ ++ + + D++G+G +D EFV +M+
Sbjct: 121 QVGHRDIEEIIRDVDLNGDGRVDFEEFVRMMS 152
|
| >3ox6_A Calcium-binding protein 1; EF-hand, calcium-sensor; 2.40A {Homo sapiens} PDB: 3ox5_A 2lan_A 2lap_A 2k7b_A 2k7c_A 2k7d_A Length = 153 | Back alignment and structure |
|---|
Score = 80.7 bits (200), Expect = 3e-18
Identities = 27/100 (27%), Positives = 47/100 (47%), Gaps = 5/100 (5%)
Query: 382 ENLPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNG 441
+L +E ++L E FRE D D + +L + +G E E+ + + +++ G
Sbjct: 3 RSLRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGG 62
Query: 442 NIDSIEFVNLMTDIYKLETPEL-----LEKAFQYLDKNSD 476
++D +FV LM ET ++ L AF+ D N D
Sbjct: 63 HVDFDDFVELMGPKLLAETADMIGVKELRDAFREFDTNGD 102
|
| >2obh_A Centrin-2; DNA repair complex EF hand superfamily protein-peptide compl cycle; 1.80A {Homo sapiens} SCOP: a.39.1.5 PDB: 3kf9_A 1m39_A 2a4j_A 2k2i_A 1oqp_A Length = 143 | Back alignment and structure |
|---|
Score = 86.0 bits (214), Expect = 3e-20
Identities = 30/144 (20%), Positives = 66/144 (45%), Gaps = 15/144 (10%)
Query: 322 DEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAV--KNSSTLE- 378
+E+ Q ++E F D D GT+ EL+ + +G + ++K ++ + + + +
Sbjct: 2 EEQKQEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNF 61
Query: 379 ---------SLCENLPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVN 429
+ E +E +++ F+ D D + ++ LK +LG L + E+
Sbjct: 62 GDFLTVMTQKMSEKDTKEE---ILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQ 118
Query: 430 QYMEAGDIDGNGNIDSIEFVNLMT 453
+ ++ D DG+G + EF+ +M
Sbjct: 119 EMIDEADRDGDGEVSEQEFLRIMK 142
|
| >2obh_A Centrin-2; DNA repair complex EF hand superfamily protein-peptide compl cycle; 1.80A {Homo sapiens} SCOP: a.39.1.5 PDB: 3kf9_A 1m39_A 2a4j_A 2k2i_A 1oqp_A Length = 143 | Back alignment and structure |
|---|
Score = 78.7 bits (195), Expect = 1e-17
Identities = 25/90 (27%), Positives = 49/90 (54%), Gaps = 1/90 (1%)
Query: 388 EKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIE 447
+KQ++ E F D D + T+ + ELK + LG ++ E+ + + D +G G ++ +
Sbjct: 4 QKQEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNFGD 63
Query: 448 FVNLMTD-IYKLETPELLEKAFQYLDKNSD 476
F+ +MT + + +T E + KAF+ D +
Sbjct: 64 FLTVMTQKMSEKDTKEEILKAFKLFDDDET 93
|
| >3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337 | Back alignment and structure |
|---|
Score = 90.6 bits (225), Expect = 3e-20
Identities = 54/296 (18%), Positives = 103/296 (34%), Gaps = 55/296 (18%)
Query: 27 FGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQI-RLYLSGQPN 85
+ +G+G++G ++ + + +A K E RE +I + L N
Sbjct: 41 MVKQIGKGRYGEVWMGK-------WRGEKVAVK-VFFTTEEASWFRETEIYQTVLMRHEN 92
Query: 86 VVEF----KSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCH 141
++ F T ++++ + E G L+D + + + + V+ + H
Sbjct: 93 ILGFIAADIKGTGSWTQLYLITDYHENGSLYD-YLKSTTLDAKSMLKLAYSSVSGLCHLH 151
Query: 142 S--------MGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDI-----VG 188
+ + HRDLK +N I N + D G A+ F DI VG
Sbjct: 152 TEIFSTQGKPAIAHRDLKSKN---ILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVG 208
Query: 189 SGFYIAPEVL-------RRRYGKEIDIWSAGVILYILLSGV----------PPFWAETKK 231
+ Y+ PEVL + D++S G+IL+ + P+
Sbjct: 209 TKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPS 268
Query: 232 GTYDAILQGEIDFDT------DPWPSISSTA--KDLVRRMLTKDPKRRITAAQVLE 279
++ + + W S L+ +P R+TA +V +
Sbjct: 269 DPSYEDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKK 324
|
| >3j04_B Myosin regulatory light chain 2, smooth muscle MA isoform; phosphorylation, 2D crystalline arrays, myosin regulation, M light chains, structural protein; 20.00A {Gallus gallus} Length = 143 | Back alignment and structure |
|---|
Score = 86.0 bits (214), Expect = 3e-20
Identities = 26/139 (18%), Positives = 51/139 (36%), Gaps = 5/139 (3%)
Query: 320 LPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNSSTLES 379
+ Q KE F +D +++G + ++L L +G T+ ++ +M
Sbjct: 1 FDQSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLASMGKNPTDEYLEGMMSEAPGPINFTM 60
Query: 380 LCENLPTKEKQK-----LMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEA 434
K + F D + S + L+ L +G + EV++
Sbjct: 61 FLTMFGEKLNGTDPEDVIRNAFACFDEEASGFIHEDHLRELLTTMGDRFTDEEVDEMYRE 120
Query: 435 GDIDGNGNIDSIEFVNLMT 453
ID GN + +EF ++
Sbjct: 121 APIDKKGNFNYVEFTRILK 139
|
| >3j04_B Myosin regulatory light chain 2, smooth muscle MA isoform; phosphorylation, 2D crystalline arrays, myosin regulation, M light chains, structural protein; 20.00A {Gallus gallus} Length = 143 | Back alignment and structure |
|---|
Score = 61.7 bits (151), Expect = 8e-12
Identities = 17/94 (18%), Positives = 35/94 (37%), Gaps = 5/94 (5%)
Query: 384 LPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNI 443
+ Q+ E F +D + + +L LA +G + + M + G I
Sbjct: 1 FDQSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLASMGKNPTDEYLEGMMS----EAPGPI 56
Query: 444 DSIEFVNLMTDIYKLETPE-LLEKAFQYLDKNSD 476
+ F+ + + PE ++ AF D+ +
Sbjct: 57 NFTMFLTMFGEKLNGTDPEDVIRNAFACFDEEAS 90
|
| >4ds7_A Calmodulin, CAM; protein binding, metal binding, structura; 2.15A {Kluyveromyces lactis} PDB: 1lkj_A 1f54_A 1f55_A Length = 147 | Back alignment and structure |
|---|
Score = 85.6 bits (213), Expect = 5e-20
Identities = 35/147 (23%), Positives = 68/147 (46%), Gaps = 10/147 (6%)
Query: 316 IVEYLPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVK--N 373
+ + L +E+ KE F D D +G++S EL + +G +E +V LM +
Sbjct: 1 MSQNLTEEQIAEFKEAFALFDKDNSGSISASELATVMRSLGLSPSEAEVADLMNEIDVDG 60
Query: 374 SSTL--ESLCENLPTKEKQK-----LMEKFREMDTDNSDTLTLSELKAGLAKLGSALEES 426
+ + + + K L+E F+ D + ++ +ELK L +G L ++
Sbjct: 61 NHAIEFSEFLALMSRQLKCNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDA 120
Query: 427 EVNQYMEAGDIDGNGNIDSIEFVNLMT 453
EV++ + DG+G I+ +F L++
Sbjct: 121 EVDEMLREVS-DGSGEINIKQFAALLS 146
|
| >4ds7_A Calmodulin, CAM; protein binding, metal binding, structura; 2.15A {Kluyveromyces lactis} PDB: 1lkj_A 1f54_A 1f55_A Length = 147 | Back alignment and structure |
|---|
Score = 78.7 bits (195), Expect = 1e-17
Identities = 34/96 (35%), Positives = 53/96 (55%), Gaps = 1/96 (1%)
Query: 382 ENLPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNG 441
+NL ++ + E F D DNS +++ SEL + LG + E+EV M D+DGN
Sbjct: 3 QNLTEEQIAEFKEAFALFDKDNSGSISASELATVMRSLGLSPSEAEVADLMNEIDVDGNH 62
Query: 442 NIDSIEFVNLMTDIYK-LETPELLEKAFQYLDKNSD 476
I+ EF+ LM+ K ++ + L +AF+ DKN D
Sbjct: 63 AIEFSEFLALMSRQLKCNDSEQELLEAFKVFDKNGD 98
|
| >1rro_A RAT oncomodulin; calcium-binding protein; 1.30A {Rattus rattus} SCOP: a.39.1.4 PDB: 1omd_A 2nln_A 1ttx_A Length = 108 | Back alignment and structure |
|---|
Score = 83.9 bits (208), Expect = 5e-20
Identities = 29/106 (27%), Positives = 48/106 (45%), Gaps = 7/106 (6%)
Query: 355 VGSMLTEFDVKHLMEAVKNSSTL--ESLCE--NLPTKEKQKLMEKFREMDTDNSDTLTLS 410
+ +L+ D+ ++ ++ T + + L ++ + FR +D D S L
Sbjct: 2 ITDILSAEDIAAALQECQDPDTFEPQKFFQTSGLSKMSASQVKDIFRFIDNDQSGYLDGD 61
Query: 411 ELKAGLAKLGS---ALEESEVNQYMEAGDIDGNGNIDSIEFVNLMT 453
ELK L K S L ESE M+A D DG+G I + EF ++
Sbjct: 62 ELKYFLQKFQSDARELTESETKSLMDAADNDGDGKIGADEFQEMVH 107
|
| >1rro_A RAT oncomodulin; calcium-binding protein; 1.30A {Rattus rattus} SCOP: a.39.1.4 PDB: 1omd_A 2nln_A 1ttx_A Length = 108 | Back alignment and structure |
|---|
Score = 55.4 bits (134), Expect = 6e-10
Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 3/55 (5%)
Query: 320 LPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSM---LTEFDVKHLMEAV 371
L +K+ F +D D++G L DEL+ L K S LTE + K LM+A
Sbjct: 35 LSKMSASQVKDIFRFIDNDQSGYLDGDELKYFLQKFQSDARELTESETKSLMDAA 89
|
| >3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289 | Back alignment and structure |
|---|
Score = 88.9 bits (221), Expect = 6e-20
Identities = 46/212 (21%), Positives = 85/212 (40%), Gaps = 25/212 (11%)
Query: 26 FFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQI--RLYLSGQ 83
G+ +G G FG Y + A K + + + E+ + +
Sbjct: 27 TVGQRIGSGSFGTVYKGKWHGD---VAVKML-NVTAPTPQQLQAFKNEVGVLRKTR---H 79
Query: 84 PNVVEFK--STYEDETAVHVVMELCEGGDLFDRIIAKGYN-SERDAATVLRAIVNAVNVC 140
N++ F ST + +V + CEG L+ + A + + R ++
Sbjct: 80 VNILLFMGYSTAPQ---LAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYL 136
Query: 141 HSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGF---YIAPEV 197
H+ ++HRDLK N I ++ +K+ DFG A ++APEV
Sbjct: 137 HAKSIIHRDLKSNN---IFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEV 193
Query: 198 LRR----RYGKEIDIWSAGVILYILLSGVPPF 225
+R Y + D+++ G++LY L++G P+
Sbjct: 194 IRMQDSNPYSFQSDVYAFGIVLYELMTGQLPY 225
|
| >1uhk_A Aequorin 2, aequorin; EF-hand motif, complex, luminescent protein; HET: CZN; 1.60A {Aequorea victoria} SCOP: a.39.1.5 PDB: 1ej3_A* 1uhi_A* 1uhj_A* 1uhh_A* 1sl8_A Length = 191 | Back alignment and structure |
|---|
Score = 86.0 bits (213), Expect = 1e-19
Identities = 31/180 (17%), Positives = 53/180 (29%), Gaps = 29/180 (16%)
Query: 312 TIKVIVEYLPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKV-----GSMLTEFDVKH 366
K+ ++ K F +D + NG +S DE+ + + G+ +
Sbjct: 2 NSKLTSDFDNPRWIGRHKHMFNFLDVNHNGKISLDEMVYKASDIVINNLGATPEQAKRHK 61
Query: 367 LMEAV------------------------KNSSTLESLCENLPTKEKQKLMEKFREMDTD 402
+ LE +N PT + F +D D
Sbjct: 62 DAVEAFFGGAGMKYGVETDWPAYIEGWKKLATDELEKYAKNEPTLIRIWGDALFDIVDKD 121
Query: 403 NSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIYKLETPE 462
+ +TL E KA G + + DID +G +D E + P
Sbjct: 122 QNGAITLDEWKAYTKAAGIIQSSEDCEETFRVCDIDESGQLDVDEMTRQHLGFWYTMDPA 181
|
| >1uhk_A Aequorin 2, aequorin; EF-hand motif, complex, luminescent protein; HET: CZN; 1.60A {Aequorea victoria} SCOP: a.39.1.5 PDB: 1ej3_A* 1uhi_A* 1uhj_A* 1uhh_A* 1sl8_A Length = 191 | Back alignment and structure |
|---|
Score = 60.2 bits (146), Expect = 7e-11
Identities = 14/111 (12%), Positives = 37/111 (33%), Gaps = 21/111 (18%)
Query: 387 KEKQKLMEKFREMDTDNSDTLTLSELKAGLAK-----LGSALEESEVNQYMEAGDIDGNG 441
+ + F +D +++ ++L E+ + LG+ E+++ ++ G G
Sbjct: 13 RWIGRHKHMFNFLDVNHNGKISLDEMVYKASDIVINNLGATPEQAKRHKDAVEAFFGGAG 72
Query: 442 -----NIDSIEFVNLMTDIYKLETP-----------ELLEKAFQYLDKNSD 476
D ++ + E + F +DK+ +
Sbjct: 73 MKYGVETDWPAYIEGWKKLATDELEKYAKNEPTLIRIWGDALFDIVDKDQN 123
|
| >1uhk_A Aequorin 2, aequorin; EF-hand motif, complex, luminescent protein; HET: CZN; 1.60A {Aequorea victoria} SCOP: a.39.1.5 PDB: 1ej3_A* 1uhi_A* 1uhj_A* 1uhh_A* 1sl8_A Length = 191 | Back alignment and structure |
|---|
Score = 39.8 bits (93), Expect = 6e-04
Identities = 13/67 (19%), Positives = 24/67 (35%)
Query: 305 MNKLKKLTIKVIVEYLPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDV 364
KL ++ + P F +D D+NG ++ DE +A G + + D
Sbjct: 88 WKKLATDELEKYAKNEPTLIRIWGDALFDIVDKDQNGAITLDEWKAYTKAAGIIQSSEDC 147
Query: 365 KHLMEAV 371
+
Sbjct: 148 EETFRVC 154
|
| >1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* Length = 397 | Back alignment and structure |
|---|
Score = 90.0 bits (223), Expect = 1e-19
Identities = 62/368 (16%), Positives = 111/368 (30%), Gaps = 116/368 (31%)
Query: 24 HYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLS-- 81
Y R LG G F +L + + A K + + EI++ +
Sbjct: 38 RYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYT----ETALDEIRLLKSVRNS 93
Query: 82 -----GQPNVV----EFKSTYEDETAVHV--VMELCEGGDLFDRIIAKGYN--SERDAAT 128
+ VV +F H+ V E+ G L II Y
Sbjct: 94 DPNDPNREMVVQLLDDF--KISGVNGTHICMVFEVL-GHHLLKWIIKSNYQGLPLPCVKK 150
Query: 129 VLRAIVNAVNVCHS-MGVMHRDLKPENFSFISRD-------------------------- 161
+++ ++ ++ H+ ++H D+KPEN +
Sbjct: 151 IIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLAAEATEWQRSGAPPPSGSAV 210
Query: 162 --------------------DNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEV-LRR 200
+ +K+ D G+A + + + + + Y + EV +
Sbjct: 211 STAPATAGNFLVNPLEPKNAEKLKVKIADLGNA--CWVHKHFTEDIQTRQYRSLEVLIGS 268
Query: 201 RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYD---------AIL------------- 238
Y DIWS + + L +G F + + +L
Sbjct: 269 GYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKY 328
Query: 239 -------QGEIDFDTD--PWPSISSTAK-------------DLVRRMLTKDPKRRITAAQ 276
+G++ T PW + D + ML P++R TAA+
Sbjct: 329 SKEFFTKKGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAE 388
Query: 277 VLEHPWLR 284
L HPWL
Sbjct: 389 CLRHPWLN 396
|
| >1wdc_B Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Y 1kqm_B* 1kwo_B* 1l2o_B* 1qvi_Y* 1s5g_Y* 1sr6_B 1b7t_Y 3jtd_B 3jvt_B 1scm_B 1kk8_B* 1dfk_Y 1dfl_Y* 2w4t_Y 2w4v_Y 2w4w_Y 2otg_B* 2os8_B* 3pn7_B ... Length = 156 | Back alignment and structure |
|---|
Score = 84.1 bits (209), Expect = 2e-19
Identities = 24/145 (16%), Positives = 59/145 (40%), Gaps = 6/145 (4%)
Query: 314 KVIVEYLPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKN 373
++ LP ++ Q +KE F +D D++G +S ++++A ++G + ++ +++
Sbjct: 6 SGVLTKLPQKQIQEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLKEAPG 65
Query: 374 SSTLESLCENLPTKEKQK-----LMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEV 428
K + F D + L + +K L +G + E+
Sbjct: 66 PLNFTMFLSIFSDKLSGTDSEETIRNAFAMFDEQETKKLNIEYIKDLLENMGDNFNKDEM 125
Query: 429 NQYMEAGDIDGNGNIDSIEFVNLMT 453
+ ++G G D ++F ++
Sbjct: 126 RMTFKEAPVEG-GKFDYVKFTAMIK 149
|
| >1wdc_B Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Y 1kqm_B* 1kwo_B* 1l2o_B* 1qvi_Y* 1s5g_Y* 1sr6_B 1b7t_Y 3jtd_B 3jvt_B 1scm_B 1kk8_B* 1dfk_Y 1dfl_Y* 2w4t_Y 2w4v_Y 2w4w_Y 2otg_B* 2os8_B* 3pn7_B ... Length = 156 | Back alignment and structure |
|---|
Score = 62.9 bits (154), Expect = 4e-12
Identities = 21/96 (21%), Positives = 44/96 (45%), Gaps = 5/96 (5%)
Query: 382 ENLPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNG 441
LP K+ Q++ E F +D D ++ ++KA +LG A ++ E+ ++ + G
Sbjct: 10 TKLPQKQIQEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLK----EAPG 65
Query: 442 NIDSIEFVNLMTDIYKLETPEL-LEKAFQYLDKNSD 476
++ F+++ +D E + AF D+
Sbjct: 66 PLNFTMFLSIFSDKLSGTDSEETIRNAFAMFDEQET 101
|
| >1s6j_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5 Length = 87 | Back alignment and structure |
|---|
Score = 79.9 bits (198), Expect = 8e-19
Identities = 34/71 (47%), Positives = 44/71 (61%)
Query: 382 ENLPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNG 441
E L +E L E F+ +DTDNS T+T ELK GL ++GS L ESE+ M+A DID +G
Sbjct: 15 ERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSG 74
Query: 442 NIDSIEFVNLM 452
ID EF+
Sbjct: 75 TIDYGEFIAAT 85
|
| >1s6j_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5 Length = 87 | Back alignment and structure |
|---|
Score = 66.8 bits (164), Expect = 4e-14
Identities = 28/58 (48%), Positives = 40/58 (68%)
Query: 314 KVIVEYLPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAV 371
K + E L +EE LKE F +DTD +GT+++DEL+ GL +VGS L E ++K LM+A
Sbjct: 11 KHMAERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAA 68
|
| >2f33_A Calbindin; EF-hand, Ca2+-binding, metal binding protein; NMR {Rattus norvegicus} PDB: 2g9b_A Length = 263 | Back alignment and structure |
|---|
Score = 84.5 bits (209), Expect = 1e-18
Identities = 32/196 (16%), Positives = 66/196 (33%), Gaps = 39/196 (19%)
Query: 320 LPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFD------VKHLMEAV-K 372
E ++ D D +G L EL+ + ++ + +K ++ +
Sbjct: 10 SSLITASQFFEIWLHFDADGSGYLEGKELQNLIQELLQARKKAGLELSPEMKTFVDQYGQ 69
Query: 373 NSS---TLESLCENLPTKEKQK-------------LMEKFREMDTDNSDTLTLSELKAGL 416
+ L LPT+E M+ +R+ DTD+S + ELK L
Sbjct: 70 RDDGKIGIVELAHVLPTEENFLLLFRCQQLKSCEEFMKTWRKYDTDHSGFIETEELKNFL 129
Query: 417 AKLGSALEES--------EVNQYMEAGDIDGNGNIDSIEFVNLMTDIYKL--------ET 460
L ++ + ++ D + +G ++ E L+
Sbjct: 130 KDLLEKANKTVDDTKLAEYTDLMLKLFDSNNDGKLELTEMARLLPVQENFLLKFQGIKMC 189
Query: 461 PELLEKAFQYLDKNSD 476
+ KAF+ D++ +
Sbjct: 190 GKEFNKAFELYDQDGN 205
|
| >2f33_A Calbindin; EF-hand, Ca2+-binding, metal binding protein; NMR {Rattus norvegicus} PDB: 2g9b_A Length = 263 | Back alignment and structure |
|---|
Score = 57.2 bits (138), Expect = 2e-09
Identities = 29/244 (11%), Positives = 74/244 (30%), Gaps = 43/244 (17%)
Query: 244 FDTDPWPSISST-AKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASDDTSVILRMKQF 302
FD D + ++L++ +L K + + ++ + + + +
Sbjct: 25 FDADGSGYLEGKELQNLIQELLQARKKAGLELSPEMK----TFVDQYGQRDDGKIGIVEL 80
Query: 303 RRMNKLKKLTIKVIVEYLPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVG------ 356
+ ++ + + + + + + DTD +G + +EL+ L +
Sbjct: 81 AHVLPTEENFLLLFRCQQLKSCEE-FMKTWRKYDTDHSGFIETEELKNFLKDLLEKANKT 139
Query: 357 -----------SMLTEFDV-----------KHLMEAVKNSSTLESLCENLPTKEKQKLME 394
ML FD L+ +N L ++ +
Sbjct: 140 VDDTKLAEYTDLMLKLFDSNNDGKLELTEMARLLPVQEN----FLLKFQGIKMCGKEFNK 195
Query: 395 KFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEA-----GDIDGNGNIDSIEFV 449
F D D + + +EL A L L ++ + + G + +
Sbjct: 196 AFELYDQDGNGYIDENELDALLKDLCEKNKQELDINNISTYKKNIMALSDGGKLYRTDLA 255
Query: 450 NLMT 453
+++
Sbjct: 256 LILS 259
|
| >2bl0_C Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum} Length = 142 | Back alignment and structure |
|---|
Score = 81.0 bits (201), Expect = 1e-18
Identities = 26/141 (18%), Positives = 55/141 (39%), Gaps = 10/141 (7%)
Query: 322 DEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNSST----- 376
D++ KE F D+++ G ++ + L+ L + G + + +
Sbjct: 2 DDQVSEFKEAFELFDSERTGFITKEGLQTVLKQFGVRVEPAAFNEMFNEADATGNGKIQF 61
Query: 377 ---LESLCENL-PTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYM 432
L + + T + L + FR D + + + + L+ L LG L+ E +++
Sbjct: 62 PEFLSMMGRRMKQTTSEDILRQAFRTFDPEGTGYIPKAALQDALLNLGDRLKPHEFAEFL 121
Query: 433 EAGDIDGNGNIDSIEFVNLMT 453
+ + G I F+N M
Sbjct: 122 GITETE-KGQIRYDNFINTMF 141
|
| >2bl0_C Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum} Length = 142 | Back alignment and structure |
|---|
Score = 78.3 bits (194), Expect = 1e-17
Identities = 24/90 (26%), Positives = 41/90 (45%), Gaps = 1/90 (1%)
Query: 388 EKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIE 447
+ + E F D++ + +T L+ L + G +E + N+ D GNG I E
Sbjct: 4 QVSEFKEAFELFDSERTGFITKEGLQTVLKQFGVRVEPAAFNEMFNEADATGNGKIQFPE 63
Query: 448 FVNLMTDIYKLETPE-LLEKAFQYLDKNSD 476
F+++M K T E +L +AF+ D
Sbjct: 64 FLSMMGRRMKQTTSEDILRQAFRTFDPEGT 93
|
| >2bl0_B Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum} Length = 145 | Back alignment and structure |
|---|
Score = 80.7 bits (200), Expect = 2e-18
Identities = 35/143 (24%), Positives = 64/143 (44%), Gaps = 7/143 (4%)
Query: 323 EETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAV-KNSSTLESLC 381
++E F D D +G +S +EL + L +G T ++ + + L +
Sbjct: 2 ASADQIQECFQIFDKDNDGKVSIEELGSALRSLGKNPTNAELNTIKGQLNAKEFDLATFK 61
Query: 382 ENLPTKEKQK------LMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAG 435
K +++ FR +D + + T+ +EL+ L LG AL SEV + M+
Sbjct: 62 TVYRKPIKTPTEQSKEMLDAFRALDKEGNGTIQEAELRQLLLNLGDALTSSEVEELMKEV 121
Query: 436 DIDGNGNIDSIEFVNLMTDIYKL 458
+ G+G I+ FV+++ Y L
Sbjct: 122 SVSGDGAINYESFVDMLVTGYPL 144
|
| >2bl0_B Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum} Length = 145 | Back alignment and structure |
|---|
Score = 54.5 bits (132), Expect = 3e-09
Identities = 22/93 (23%), Positives = 37/93 (39%), Gaps = 5/93 (5%)
Query: 386 TKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDS 445
T ++ E F+ D DN +++ EL + L LG +E+N + D
Sbjct: 1 TASADQIQECFQIFDKDNDGKVSIEELGSALRSLGKNPTNAELNTIKGQLNAKE---FDL 57
Query: 446 IEFVNLMTDIYKLETP--ELLEKAFQYLDKNSD 476
F + K T + + AF+ LDK +
Sbjct: 58 ATFKTVYRKPIKTPTEQSKEMLDAFRALDKEGN 90
|
| >1w7j_B Myosin light chain 1; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Homo sapiens} SCOP: a.39.1.5 PDB: 1w7i_B* 1oe9_B* 3j04_C 1br1_B* 1br4_B* 1i84_T* 3dtp_C 2w4a_C 2w4g_C 2w4h_C Length = 151 | Back alignment and structure |
|---|
Score = 79.9 bits (198), Expect = 4e-18
Identities = 29/147 (19%), Positives = 57/147 (38%), Gaps = 14/147 (9%)
Query: 320 LPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVK----NSS 375
++ + KE F D +G + Y + + +G T +V ++ K S
Sbjct: 4 FNKDQLEEFKEAFELFDRVGDGKILYSQCGDVMRALGQNPTNAEVLKVLGNPKSDELKSR 63
Query: 376 TLE---------SLCENLPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEES 426
++ ++ +N + +E FR D + + + +EL+ L LG + E
Sbjct: 64 RVDFETFLPMLQAVAKNRGQGTYEDYLEGFRVFDKEGNGKVMGAELRHVLTTLGEKMTEE 123
Query: 427 EVNQYMEAGDIDGNGNIDSIEFVNLMT 453
EV + D NG I+ F+ +
Sbjct: 124 EVETVLAG-HEDSNGCINYEAFLKHIL 149
|
| >1w7j_B Myosin light chain 1; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Homo sapiens} SCOP: a.39.1.5 PDB: 1w7i_B* 1oe9_B* 3j04_C 1br1_B* 1br4_B* 1i84_T* 3dtp_C 2w4a_C 2w4g_C 2w4h_C Length = 151 | Back alignment and structure |
|---|
Score = 53.4 bits (129), Expect = 1e-08
Identities = 17/98 (17%), Positives = 35/98 (35%), Gaps = 5/98 (5%)
Query: 384 LPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDID--GNG 441
+ ++ E F D + S+ + LG +EV + + D +
Sbjct: 4 FNKDQLEEFKEAFELFDRVGDGKILYSQCGDVMRALGQNPTNAEVLKVLGNPKSDELKSR 63
Query: 442 NIDSIEFVNLMTDIYKLE---TPELLEKAFQYLDKNSD 476
+D F+ ++ + K T E + F+ DK +
Sbjct: 64 RVDFETFLPMLQAVAKNRGQGTYEDYLEGFRVFDKEGN 101
|
| >3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322 | Back alignment and structure |
|---|
Score = 83.2 bits (206), Expect = 8e-18
Identities = 61/302 (20%), Positives = 108/302 (35%), Gaps = 67/302 (22%)
Query: 27 FGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQ-PN 85
+ RG+FG + + +A K + + + E ++ + N
Sbjct: 28 LLEVKARGRFGCVWKAQLLNEY-------VAVK-IFPIQDKQSWQNEYEVYSLPGMKHEN 79
Query: 86 VVEF----KSTYEDETAVHVVMELCEGGDLFD-------------RI---IAKGYNSERD 125
+++F K + + ++ E G L D I +A+G
Sbjct: 80 ILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLKANVVSWNELCHIAETMARGLAY--- 136
Query: 126 AATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRD 185
L + + H + HRD+K +N + +N + DFG AL FE G+ D
Sbjct: 137 ----LHEDIPGLKDGHKPAISHRDIKSKN---VLLKNNLTACIADFGLALKFEAGKSAGD 189
Query: 186 I---VGSGFYIAPEVLR------RRYGKEIDIWSAGVILYILLSG-----------VPPF 225
VG+ Y+APEVL R ID+++ G++L+ L S + PF
Sbjct: 190 THGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPF 249
Query: 226 WAETKKGTYDAILQGEIDFD------TDPWPSISSTAK--DLVRRMLTKDPKRRITAAQV 277
E + +Q + D W + A + + D + R++A V
Sbjct: 250 EEEIGQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCV 309
Query: 278 LE 279
E
Sbjct: 310 GE 311
|
| >2mys_B Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1i84_U* 1m8q_B* 1mvw_B* 1o18_E* 1o19_B* 1o1a_B* 1o1b_B* 1o1c_B* 1o1d_B* 1o1e_B* 1o1f_B* 1o1g_B* 2w4a_B 2w4g_B 2w4h_B Length = 166 | Back alignment and structure |
|---|
Score = 79.2 bits (196), Expect = 1e-17
Identities = 29/144 (20%), Positives = 53/144 (36%), Gaps = 6/144 (4%)
Query: 316 IVEYLPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNSS 375
+ + E + KE F +D + +G + D+LR +G + + + M +
Sbjct: 15 VFSMFDETEIEDFKEAFTVIDQNADGIIDKDDLRETFAAMGRLNVKNEELDAMIKEASGP 74
Query: 376 T-----LESLCENL-PTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVN 429
L E L + +M F+ +D D ++ S L+ L G E+
Sbjct: 75 INFTVFLTMFGEKLKGADPEDVIMGAFKVLDPDGKGSIKKSFLEELLTTGGGRFTPEEIK 134
Query: 430 QYMEAGDIDGNGNIDSIEFVNLMT 453
A D GN+D ++T
Sbjct: 135 NMWAAFPPDVAGNVDYKNICYVIT 158
|
| >2mys_B Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1i84_U* 1m8q_B* 1mvw_B* 1o18_E* 1o19_B* 1o1a_B* 1o1b_B* 1o1c_B* 1o1d_B* 1o1e_B* 1o1f_B* 1o1g_B* 2w4a_B 2w4g_B 2w4h_B Length = 166 | Back alignment and structure |
|---|
Score = 61.5 bits (150), Expect = 2e-11
Identities = 17/96 (17%), Positives = 38/96 (39%), Gaps = 4/96 (4%)
Query: 382 ENLPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNG 441
E + E F +D + + +L+ A +G ++E M + +G
Sbjct: 17 SMFDETEIEDFKEAFTVIDQNADGIIDKDDLRETFAAMGRLNVKNEELDAM---IKEASG 73
Query: 442 NIDSIEFVNLMTDIYK-LETPELLEKAFQYLDKNSD 476
I+ F+ + + K + +++ AF+ LD +
Sbjct: 74 PINFTVFLTMFGEKLKGADPEDVIMGAFKVLDPDGK 109
|
| >2hps_A Coelenterazine-binding protein with bound coelent; bioluminescence, southeast collabora structural genomics, secsg, structural genomics, PSI; HET: CTZ; 1.72A {Renilla muelleri} PDB: 2hq8_A Length = 186 | Back alignment and structure |
|---|
Score = 79.4 bits (196), Expect = 2e-17
Identities = 28/177 (15%), Positives = 57/177 (32%), Gaps = 24/177 (13%)
Query: 316 IVEYLPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSM--LTEFDVKHLMEAVKN 373
I E + +K + +D +G +S ++ ++ + L+ + +
Sbjct: 4 ITESERAYHLRKMKTRMQRVDVTGDGFISREDYELIAVRIAKIAKLSAEKAEETRQEFLR 63
Query: 374 ----------------------SSTLESLCENLPTKEKQKLMEKFREMDTDNSDTLTLSE 411
+ +L + + + + +DTD ++L E
Sbjct: 64 VADQLGLAPGVRISVEEAAVNATDSLLKMKGEEKAMAVIQSLIMYDCIDTDKDGYVSLPE 123
Query: 412 LKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIYKLETPELLEKAF 468
KA L +G L + + D + NG I EF+ + D L AF
Sbjct: 124 FKAFLQAVGPDLTDDKAITCFNTLDFNKNGQISRDEFLVTVNDFLFGLEETALANAF 180
|
| >2hps_A Coelenterazine-binding protein with bound coelent; bioluminescence, southeast collabora structural genomics, secsg, structural genomics, PSI; HET: CTZ; 1.72A {Renilla muelleri} PDB: 2hq8_A Length = 186 | Back alignment and structure |
|---|
Score = 61.7 bits (150), Expect = 2e-11
Identities = 12/116 (10%), Positives = 33/116 (28%), Gaps = 16/116 (13%)
Query: 377 LESLCENLPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEES---------E 427
+ + E+ +K+ + + +D ++ + + ++ + S E
Sbjct: 1 MPEITESERAYHLRKMKTRMQRVDVTGDGFISREDYELIAVRIAKIAKLSAEKAEETRQE 60
Query: 428 VNQYMEAGDIDGNGNIDSIEFVNLMTDIYKLETPE-------LLEKAFQYLDKNSD 476
+ + + I E TD E + +D + D
Sbjct: 61 FLRVADQLGLAPGVRISVEEAAVNATDSLLKMKGEEKAMAVIQSLIMYDCIDTDKD 116
|
| >3sg6_A Gcamp2, myosin light chain kinase, green fluorescent PROT calmodulin chimera; calcium sensor, fluorescent protein; HET: CRO; 1.70A {Gallus gallus} PDB: 3evu_A* 3ek4_A* 3ek7_A* 3evv_A* 3ek8_A* 3ekh_A* 3sg2_A* 3sg3_A* 3sg7_A* 3ekj_A* 3sg4_A* 3sg5_A* 3evr_A* 3o78_A* 3o77_A* 1trf_A Length = 450 | Back alignment and structure |
|---|
Score = 83.4 bits (206), Expect = 2e-17
Identities = 39/145 (26%), Positives = 75/145 (51%), Gaps = 9/145 (6%)
Query: 318 EYLPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVK--NSS 375
+ L +E+ KE F D D +GT++ EL + +G TE +++ ++ V +
Sbjct: 304 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 363
Query: 376 TLE-----SLCEN--LPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEV 428
T++ ++ T ++++ E FR D D + ++ +EL+ + LG L + EV
Sbjct: 364 TIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 423
Query: 429 NQYMEAGDIDGNGNIDSIEFVNLMT 453
++ + DIDG+G ++ EFV +MT
Sbjct: 424 DEMIREADIDGDGQVNYEEFVQMMT 448
|
| >3sg6_A Gcamp2, myosin light chain kinase, green fluorescent PROT calmodulin chimera; calcium sensor, fluorescent protein; HET: CRO; 1.70A {Gallus gallus} PDB: 3evu_A* 3ek4_A* 3ek7_A* 3evv_A* 3ek8_A* 3ekh_A* 3sg2_A* 3sg3_A* 3sg7_A* 3ekj_A* 3sg4_A* 3sg5_A* 3evr_A* 3o78_A* 3o77_A* 1trf_A Length = 450 | Back alignment and structure |
|---|
Score = 78.0 bits (192), Expect = 1e-15
Identities = 36/164 (21%), Positives = 65/164 (39%), Gaps = 10/164 (6%)
Query: 319 YLPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGS--MLTEFDVK---HLMEAVKN 373
+ + ++ D + E++ + + L D K +++
Sbjct: 240 FFKSAMPEGYIQERTIFFKDDGNYKTRAEVKFEGDTLVNRIELKGIDFKEDGNILGHKLE 299
Query: 374 SSTLESLCENLPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYME 433
+T + L E ++ + E F D D T+T EL + LG E+E+ +
Sbjct: 300 YNTRDQLTE----EQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMIN 355
Query: 434 AGDIDGNGNIDSIEFVNLMTDIYKLETPEL-LEKAFQYLDKNSD 476
D DGNG ID EF+ +M K E + +AF+ DK+ +
Sbjct: 356 EVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGN 399
|
| >1rwy_A Parvalbumin alpha; EF-hand, calcium-binding, calcium-binding protein; HET: PG4; 1.05A {Rattus norvegicus} SCOP: a.39.1.4 PDB: 1rtp_1* 2jww_A 3f45_A 1s3p_A 1xvj_A 1rjv_A 1rk9_A 1g33_A Length = 109 | Back alignment and structure |
|---|
Score = 76.9 bits (190), Expect = 2e-17
Identities = 26/106 (24%), Positives = 42/106 (39%), Gaps = 7/106 (6%)
Query: 355 VGSMLTEFDVKHLMEAVKNSSTL--ESLCE--NLPTKEKQKLMEKFREMDTDNSDTLTLS 410
+ +L+ D+K + A + + + + L K + + F +D D S +
Sbjct: 2 MTDLLSAEDIKKAIGAFTAADSFDHKKFFQMVGLKKKSADDVKKVFHILDKDKSGFIEED 61
Query: 411 ELKAGLAKL---GSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMT 453
EL + L L E M AGD DG+G I EF L+
Sbjct: 62 ELGSILKGFSSDARDLSAKETKTLMAAGDKDGDGKIGVEEFSTLVA 107
|
| >1rwy_A Parvalbumin alpha; EF-hand, calcium-binding, calcium-binding protein; HET: PG4; 1.05A {Rattus norvegicus} SCOP: a.39.1.4 PDB: 1rtp_1* 2jww_A 3f45_A 1s3p_A 1xvj_A 1rjv_A 1rk9_A 1g33_A Length = 109 | Back alignment and structure |
|---|
Score = 61.9 bits (151), Expect = 3e-12
Identities = 18/77 (23%), Positives = 30/77 (38%), Gaps = 4/77 (5%)
Query: 298 RMKQFRRMNKLKKLTIKVIVEYLPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTK--- 354
+ F + +V L + +K+ F +D DK+G + DEL + L
Sbjct: 14 AIGAFTAADSFDHKKFFQMVG-LKKKSADDVKKVFHILDKDKSGFIEEDELGSILKGFSS 72
Query: 355 VGSMLTEFDVKHLMEAV 371
L+ + K LM A
Sbjct: 73 DARDLSAKETKTLMAAG 89
|
| >2qac_A Myosin A tail domain interacting protein MTIP; malaria invasion, structural genomics, PSI, protein structur initiative, structural genomics of pathogenic protozoa CONS SGPP; 1.70A {Plasmodium falciparum} PDB: 2auc_A Length = 146 | Back alignment and structure |
|---|
Score = 78.0 bits (193), Expect = 2e-17
Identities = 30/139 (21%), Positives = 49/139 (35%), Gaps = 7/139 (5%)
Query: 320 LPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNSSTLES 379
+E+ + + G +S D K+G + D K + E ++ T E
Sbjct: 9 QLEEKVDESDVRIYFNEKSSGGKISIDNASYNARKLGLAPSSIDEKKIKELYGDNLTYEQ 68
Query: 380 LCENLPTKEKQK-----LMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEA 434
E L K L++ F D + + LT S++K L G AL + E +
Sbjct: 69 YLEYLSICVHDKDNVEELIKMFAHFDNNCTGYLTKSQMKNILTTWGDALTDQEAIDALN- 127
Query: 435 GDIDGNGNIDSIEFVNLMT 453
NID F +
Sbjct: 128 -AFSSEDNIDYKLFCEDIL 145
|
| >2qac_A Myosin A tail domain interacting protein MTIP; malaria invasion, structural genomics, PSI, protein structur initiative, structural genomics of pathogenic protozoa CONS SGPP; 1.70A {Plasmodium falciparum} PDB: 2auc_A Length = 146 | Back alignment and structure |
|---|
Score = 56.1 bits (136), Expect = 9e-10
Identities = 12/94 (12%), Positives = 31/94 (32%), Gaps = 5/94 (5%)
Query: 384 LPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNI 443
++ + + + + +++ KLG A + + E N+
Sbjct: 9 QLEEKVDESDVRIYFNEKSSGGKISIDNASYNARKLGLAPSSIDEKKIKE----LYGDNL 64
Query: 444 DSIEFVNLMTDIYK-LETPELLEKAFQYLDKNSD 476
+++ ++ + E L K F + D N
Sbjct: 65 TYEQYLEYLSICVHDKDNVEELIKMFAHFDNNCT 98
|
| >1alv_A Calpain, S-camld; calcium binding, calmodulin like, domain of cystein protease; 1.90A {Sus scrofa} SCOP: a.39.1.8 PDB: 1alw_A* 1nx0_A 1nx1_A 1nx2_A 1nx3_A* 1kfu_S 1kfx_S 3bow_B 1u5i_B 1df0_B 3df0_B 1aj5_A 1dvi_A 1np8_A Length = 173 | Back alignment and structure |
|---|
Score = 79.0 bits (195), Expect = 2e-17
Identities = 34/165 (20%), Positives = 64/165 (38%), Gaps = 20/165 (12%)
Query: 323 EETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFD--------VKHLMEAV--K 372
EE + + F ++ D + +S EL L KV + + + ++ +
Sbjct: 1 EEVRQFRRLFAQLAGD-DMEVSATELMNILNKVVTRHPDLKTDGFGIDTCRSMVAVMDSD 59
Query: 373 NSSTLESLCENLP-TKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQY 431
+ L E +K +++ D D S T+ SEL G L E +
Sbjct: 60 TTGKL-GFEEFKYLWNNIKKWQAIYKQFDVDRSGTIGSSELPGAFEAAGFHLNE-HLYSM 117
Query: 432 MEAGDIDGNGNIDSIEFVNLMTDIYKLETPELLEKAFQYLDKNSD 476
+ D GN+D F++ + +L+ + +AF+ LDK+
Sbjct: 118 IIRRYSDEGGNMDFDNFISCLV---RLDA---MFRAFKSLDKDGT 156
|
| >1alv_A Calpain, S-camld; calcium binding, calmodulin like, domain of cystein protease; 1.90A {Sus scrofa} SCOP: a.39.1.8 PDB: 1alw_A* 1nx0_A 1nx1_A 1nx2_A 1nx3_A* 1kfu_S 1kfx_S 3bow_B 1u5i_B 1df0_B 3df0_B 1aj5_A 1dvi_A 1np8_A Length = 173 | Back alignment and structure |
|---|
Score = 48.6 bits (116), Expect = 6e-07
Identities = 14/92 (15%), Positives = 32/92 (34%), Gaps = 11/92 (11%)
Query: 326 QALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEA-VKNSSTLE-----S 379
+ + + + D D++GT+ EL G L E ++ ++ S
Sbjct: 77 KKWQAIYKQFDVDRSGTIGSSELPGAFEAAGFHLNEHLYSMIIRRYSDEGGNMDFDNFIS 136
Query: 380 LCENLPTKEKQKLMEKFREMDTDNSDTLTLSE 411
L + F+ +D D + + ++
Sbjct: 137 CLVRL-----DAMFRAFKSLDKDGTGQIQVNI 163
|
| >3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377 | Back alignment and structure |
|---|
Score = 82.7 bits (205), Expect = 2e-17
Identities = 56/264 (21%), Positives = 101/264 (38%), Gaps = 25/264 (9%)
Query: 27 FGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNV 86
G +GRG FG + + N A KS ++ + + +E +I S PN+
Sbjct: 118 LGEQIGRGNFGEVFSGRLRADNTLVAVKSC-RETLPPDLKAKFL-QEARILKQYS-HPNI 174
Query: 87 VEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVC------ 140
V + +++VMEL +GGD + +E V + +
Sbjct: 175 VRLIGVCTQKQPIYIVMELVQGGDFLTFL-----RTEGARLRVKTLLQMVGDAAAGMEYL 229
Query: 141 HSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYI---APEV 197
S +HRDL N + +LK++DFG + +G + APE
Sbjct: 230 ESKCCIHRDLAARN---CLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEA 286
Query: 198 LR-RRYGKEIDIWSAGVILY-ILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISST 255
L RY E D+WS G++L+ G P+ + + T + + +G
Sbjct: 287 LNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFVEKGGR---LPCPELCPDA 343
Query: 256 AKDLVRRMLTKDPKRRITAAQVLE 279
L+ + +P +R + + + +
Sbjct: 344 VFRLMEQCWAYEPGQRPSFSTIYQ 367
|
| >2hpk_A Photoprotein berovin; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 2.00A {Beroe abyssicola} Length = 208 | Back alignment and structure |
|---|
Score = 79.5 bits (196), Expect = 2e-17
Identities = 29/173 (16%), Positives = 59/173 (34%), Gaps = 30/173 (17%)
Query: 312 TIKVIVEYLPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSML--TEFDVKHLME 369
+ VE L + L ++F D D +G + DE+ ++ ++ T+ V+ + +
Sbjct: 22 QWQFNVEDLHPKMLSRLYKRFDTFDLDSDGKMEMDEVLYWPDRMRQLVNATDEQVEKMRD 81
Query: 370 AV--------------------------KNSSTLESLCENLPTKEKQKLMEKFREMDTDN 403
AV + E P+ + +D D
Sbjct: 82 AVRVFFLHKGVEPVNGLLREDWVEANRVFAEAERERERRGEPSLIALLSNSYYDVLDDDG 141
Query: 404 SDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIY 456
T+ + ELK + + + + E D D +G ++ E V+L +
Sbjct: 142 DGTVDVDELKTMMKAFD--VPQEAAYTFFEKADTDKSGKLERTELVHLFRKFW 192
|
| >2kyc_A Parvalbumin-3, parvalbumin, thymic CPV3; EF-hand protein, calcium binding protein; NMR {Gallus gallus} PDB: 2kyf_A Length = 108 | Back alignment and structure |
|---|
Score = 75.4 bits (186), Expect = 6e-17
Identities = 26/105 (24%), Positives = 45/105 (42%), Gaps = 7/105 (6%)
Query: 356 GSMLTEFDVKHLMEAVKNSSTL--ESLCE--NLPTKEKQKLMEKFREMDTDNSDTLTLSE 411
+L+ D+ + + + + + + K +L E FR +D D S + E
Sbjct: 3 TDILSPSDIAAALRDCQAPDSFSPKKFFQISGMSKKSSSQLKEIFRILDNDQSGFIEEDE 62
Query: 412 LKAGLAKLGS---ALEESEVNQYMEAGDIDGNGNIDSIEFVNLMT 453
LK L + S L SE ++ A D DG+G I + EF ++
Sbjct: 63 LKYFLQRFESGARVLTASETKTFLAAADHDGDGKIGAEEFQEMVQ 107
|
| >2kyc_A Parvalbumin-3, parvalbumin, thymic CPV3; EF-hand protein, calcium binding protein; NMR {Gallus gallus} PDB: 2kyf_A Length = 108 | Back alignment and structure |
|---|
Score = 60.4 bits (147), Expect = 1e-11
Identities = 17/84 (20%), Positives = 34/84 (40%), Gaps = 4/84 (4%)
Query: 291 DDTSVILRMKQFRRMNKLKKLTIKVIVEYLPDEETQALKEKFIEMDTDKNGTLSYDELRA 350
+ + ++ + + I + + + LKE F +D D++G + DEL+
Sbjct: 7 SPSDIAAALRDCQAPDSFSPKKFFQISG-MSKKSSSQLKEIFRILDNDQSGFIEEDELKY 65
Query: 351 GLTKVGSM---LTEFDVKHLMEAV 371
L + S LT + K + A
Sbjct: 66 FLQRFESGARVLTASETKTFLAAA 89
|
| >3dtp_E RLC, myosin regulatory light chain; muscle protein, smooth muscle, myosin subfragment 2, heavy meromyosin, essential light chain; 20.00A {Avicularia avicularia} Length = 196 | Back alignment and structure |
|---|
Score = 78.1 bits (193), Expect = 6e-17
Identities = 32/139 (23%), Positives = 55/139 (39%), Gaps = 6/139 (4%)
Query: 320 LPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNSSTLES 379
+ Q KE F +D DK+G +S +++RA +G + TE ++ ++
Sbjct: 51 FTQHQVQEFKEAFQLIDQDKDGFISKNDIRATFDSLGRLCTEQELDSMVAEAPGPINFTM 110
Query: 380 LCENLPTKEKQK-----LMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEA 434
+ ++ F D + LK L G + EV+Q +
Sbjct: 111 FLTIFGDRIAGTDEEDVIVNAFNLFD-EGDGKCKEETLKRSLTTWGEKFSQDEVDQALSE 169
Query: 435 GDIDGNGNIDSIEFVNLMT 453
IDGNG ID +F ++T
Sbjct: 170 APIDGNGLIDIKKFAQILT 188
|
| >3dtp_E RLC, myosin regulatory light chain; muscle protein, smooth muscle, myosin subfragment 2, heavy meromyosin, essential light chain; 20.00A {Avicularia avicularia} Length = 196 | Back alignment and structure |
|---|
Score = 53.9 bits (130), Expect = 1e-08
Identities = 17/93 (18%), Positives = 38/93 (40%), Gaps = 5/93 (5%)
Query: 384 LPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNI 443
+ Q+ E F+ +D D ++ ++++A LG E E++ + + G I
Sbjct: 51 FTQHQVQEFKEAFQLIDQDKDGFISKNDIRATFDSLGRLCTEQELDSMVA----EAPGPI 106
Query: 444 DSIEFVNLMTDIYKLETP-ELLEKAFQYLDKNS 475
+ F+ + D +++ AF D+
Sbjct: 107 NFTMFLTIFGDRIAGTDEEDVIVNAFNLFDEGD 139
|
| >3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336 | Back alignment and structure |
|---|
Score = 80.3 bits (198), Expect = 8e-17
Identities = 53/307 (17%), Positives = 103/307 (33%), Gaps = 66/307 (21%)
Query: 27 FGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQI-RLYLSGQPN 85
++GRG++G Y + + +A K A E I R+ L N
Sbjct: 17 LLELIGRGRYGAVYKGS-------LDERPVAVK-VFSFANRQNFINEKNIYRVPLMEHDN 68
Query: 86 VVEF-----KSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVC 140
+ F + T + +VME G L ++ + + + ++ +
Sbjct: 69 IARFIVGDERVTADGRMEYLLVMEYYPNGSLXK-YLSLHTSDWVSSCRLAHSVTRGLAYL 127
Query: 141 HSM---------GVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRD------ 185
H+ + HRDL N + ++ ++DFG ++ ++ R
Sbjct: 128 HTELPRGDHYKPAISHRDLNSRN---VLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNA 184
Query: 186 ---IVGSGFYIAPEVLR--------RRYGKEIDIWSAGVILYILLSGV------------ 222
VG+ Y+APEVL K++D+++ G+I + +
Sbjct: 185 AISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEY 244
Query: 223 -PPFWAETKKGTYDAILQGEIDFD------TDPWPSISSTA---KDLVRRMLTKDPKRRI 272
F E +Q + + + W S K+ + +D + R+
Sbjct: 245 QMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARL 304
Query: 273 TAAQVLE 279
TA E
Sbjct: 305 TAQXAEE 311
|
| >3li6_A Calcium-binding protein; calcium signaling protein, assemble free energy, dynamic behaviour, cytoskeleton, metal binding; 2.50A {Entamoeba histolytica} Length = 66 | Back alignment and structure |
|---|
Score = 73.4 bits (181), Expect = 1e-16
Identities = 18/64 (28%), Positives = 30/64 (46%)
Query: 392 LMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNL 451
F+E+D + ++ E+KA ++K + E + ++ D DGNG ID EF
Sbjct: 2 AEALFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKF 61
Query: 452 MTDI 455
I
Sbjct: 62 YGSI 65
|
| >3li6_A Calcium-binding protein; calcium signaling protein, assemble free energy, dynamic behaviour, cytoskeleton, metal binding; 2.50A {Entamoeba histolytica} Length = 66 | Back alignment and structure |
|---|
Score = 52.9 bits (128), Expect = 2e-09
Identities = 14/92 (15%), Positives = 35/92 (38%), Gaps = 28/92 (30%)
Query: 328 LKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNSSTLESLCENLPTK 387
+ F E+D + +G +SY+E++A ++K ++ E ++ +
Sbjct: 2 AEALFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLI-------------------- 41
Query: 388 EKQKLMEKFREMDTDNSDTLTLSELKAGLAKL 419
F+ +D D + + +E +
Sbjct: 42 --------FKSIDADGNGEIDQNEFAKFYGSI 65
|
| >2mys_C Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1m8q_C* 1mvw_C* 1o18_F* 1o19_C* 1o1a_C* 1o1b_C* 1o1c_C* 1o1d_C* 1o1e_C* 1o1f_C* 1o1g_C* Length = 149 | Back alignment and structure |
|---|
Score = 74.1 bits (183), Expect = 5e-16
Identities = 28/147 (19%), Positives = 55/147 (37%), Gaps = 14/147 (9%)
Query: 320 LPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVK----NSS 375
KE F+ D + ++ ++ +G T ++ ++ N++
Sbjct: 2 FSKAAADDFKEAFLLFDRTGDAKITASQVGDIARALGQNPTNAEINKILGNPSKEEMNAA 61
Query: 376 TLE---------SLCENLPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEES 426
+ + N + +E R D + + T+ +EL+ LA LG + E
Sbjct: 62 AITFEEFLPMLQAAANNKDQGTFEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEKMTEE 121
Query: 427 EVNQYMEAGDIDGNGNIDSIEFVNLMT 453
EV + + G D NG I+ FV +
Sbjct: 122 EVEE-LMKGQEDSNGCINYEAFVKHIM 147
|
| >2mys_C Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1m8q_C* 1mvw_C* 1o18_F* 1o19_C* 1o1a_C* 1o1b_C* 1o1c_C* 1o1d_C* 1o1e_C* 1o1f_C* 1o1g_C* Length = 149 | Back alignment and structure |
|---|
Score = 52.5 bits (127), Expect = 1e-08
Identities = 15/98 (15%), Positives = 30/98 (30%), Gaps = 5/98 (5%)
Query: 384 LPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDID--GNG 441
E F D +T S++ LG +E+N+ + +
Sbjct: 2 FSKAAADDFKEAFLLFDRTGDAKITASQVGDIARALGQNPTNAEINKILGNPSKEEMNAA 61
Query: 442 NIDSIEFVNLMTDIYKLETPELLE---KAFQYLDKNSD 476
I EF+ ++ + E + + DK +
Sbjct: 62 AITFEEFLPMLQAAANNKDQGTFEDFVEGLRVFDKEGN 99
|
| >2ggz_A Guanylyl cyclase-activating protein 3; EF hand, guanylate cyclase activating protein, GCAP, GCAP3, GCAP-3, lyase activator; 3.00A {Homo sapiens} Length = 211 | Back alignment and structure |
|---|
Score = 75.6 bits (186), Expect = 5e-16
Identities = 23/105 (21%), Positives = 44/105 (41%), Gaps = 3/105 (2%)
Query: 373 NSSTLESLCENLPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLG-SALEESEVNQY 431
N ++ + +PT+E F M S TL E K L G + ++Q
Sbjct: 5 NGKSIAGDQKAVPTQETHVWYRTF--MMEYPSGLQTLHEFKTLLGLQGLNQKANKHIDQV 62
Query: 432 MEAGDIDGNGNIDSIEFVNLMTDIYKLETPELLEKAFQYLDKNSD 476
D + +G +D +EF+ + I + + + L+ F+ D + +
Sbjct: 63 YNTFDTNKDGFVDFLEFIAAVNLIMQEKMEQKLKWYFKLYDADGN 107
|
| >2ggz_A Guanylyl cyclase-activating protein 3; EF hand, guanylate cyclase activating protein, GCAP, GCAP3, GCAP-3, lyase activator; 3.00A {Homo sapiens} Length = 211 | Back alignment and structure |
|---|
Score = 66.7 bits (163), Expect = 6e-13
Identities = 33/187 (17%), Positives = 66/187 (35%), Gaps = 25/187 (13%)
Query: 304 RMNKLKKLTIKVIVEYLPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVG-SMLTEF 362
N + + +P +ET F M +G + E + L G +
Sbjct: 3 MGNGKSIAGDQ---KAVPTQETHVWYRTF--MMEYPSGLQTLHEFKTLLGLQGLNQKANK 57
Query: 363 DVKHLMEAV--KNSSTLE------SLCENLPTKEKQKLMEKFREMDTDNSDTLTLSELKA 414
+ + ++ ++ + K +QKL F+ D D + ++ +EL
Sbjct: 58 HIDQVYNTFDTNKDGFVDFLEFIAAVNLIMQEKMEQKLKWYFKLYDADGNGSIDKNELLD 117
Query: 415 ------GLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIYKLETPELLEKAF 468
L + E +N DI+ +G + EF+N M + +LLE +
Sbjct: 118 MFMAVQALNGQQTLSPEEFINLVFHKIDINNDGELTLEEFINGMA-----KDQDLLEIVY 172
Query: 469 QYLDKNS 475
+ D ++
Sbjct: 173 KSFDFSN 179
|
| >1m45_A MLC1P, myosin light chain; protein-peptide complex, myosin light chain, cell cycle protein; 1.65A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 1m46_A 1n2d_A 2fcd_A 2fce_A Length = 148 | Back alignment and structure |
|---|
Score = 73.8 bits (182), Expect = 5e-16
Identities = 30/145 (20%), Positives = 68/145 (46%), Gaps = 15/145 (10%)
Query: 324 ETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEA---VKNSSTLE-- 378
T+A K+ F D G ++ D L L +G T V+ ++ A ++++S+L
Sbjct: 2 ATRANKDIFTLFDKKGQGAIAKDSLGDYLRAIGYNPTNQLVQDIINADSSLRDASSLTLD 61
Query: 379 ----------SLCENLPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEV 428
+ + + ++ F+ D +++ +++ +L+ L LG L ++EV
Sbjct: 62 QITGLIEVNEKELDATTKAKTEDFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEV 121
Query: 429 NQYMEAGDIDGNGNIDSIEFVNLMT 453
++ ++ ++D NG ID +F+ +
Sbjct: 122 DELLKGVEVDSNGEIDYKKFIEDVL 146
|
| >1m45_A MLC1P, myosin light chain; protein-peptide complex, myosin light chain, cell cycle protein; 1.65A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 1m46_A 1n2d_A 2fcd_A 2fce_A Length = 148 | Back alignment and structure |
|---|
Score = 53.4 bits (129), Expect = 7e-09
Identities = 17/96 (17%), Positives = 27/96 (28%), Gaps = 7/96 (7%)
Query: 388 EKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAG-DIDGNGNIDSI 446
+ + F D + L L +G V + A + ++
Sbjct: 2 ATRANKDIFTLFDKKGQGAIAKDSLGDYLRAIGYNPTNQLVQDIINADSSLRDASSLTLD 61
Query: 447 EFVNLMTDIYKLETP------ELLEKAFQYLDKNSD 476
+ L+ K E KAFQ DK S
Sbjct: 62 QITGLIEVNEKELDATTKAKTEDFVKAFQVFDKEST 97
|
| >3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group} Length = 483 | Back alignment and structure |
|---|
Score = 77.4 bits (190), Expect = 2e-15
Identities = 63/236 (26%), Positives = 93/236 (39%), Gaps = 33/236 (13%)
Query: 24 HYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQ 83
+ GR +G G FG YL T TN A K K ++ + E +I L G
Sbjct: 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVK-----TKHPQLLYESKIYRILQGG 62
Query: 84 PNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYN-SERDAATVLRA---IVNAVNV 139
+ + + +VM+L G L D S + TVL ++N V
Sbjct: 63 TGIPNVRWFGVEGDYNVLVMDLL-GPSLEDLFNFCSRKLSLK---TVLMLADQMINRVEF 118
Query: 140 CHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQV-----YRD---IVGSGF 191
HS +HRD+KP+NF + + DFG A + + YR+ + G+
Sbjct: 119 VHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTAR 178
Query: 192 YIAPEVLRRRYGKEI----DIWSAGVILYILLSGVPPFW----AETKKGTYDAILQ 239
Y + + G E D+ S G +L L G P W A TKK Y+ I +
Sbjct: 179 YAS---VNTHLGIEQSRRDDLESLGYVLMYFLRGSLP-WQGLKAGTKKQKYEKISE 230
|
| >3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288 | Back alignment and structure |
|---|
Score = 75.4 bits (186), Expect = 2e-15
Identities = 51/227 (22%), Positives = 90/227 (39%), Gaps = 28/227 (12%)
Query: 27 FGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNV 86
LG GQ+G Y + A K++ K+ M + + +E + + PN+
Sbjct: 17 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTM--EVEEFL-KEAAVMKEIK-HPNL 71
Query: 87 VEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGY--NSERDAATVLRAIVNAVNVCH--- 141
V+ E +++ E G+L D Y R + + + A +
Sbjct: 72 VQLLGVCTREPPFYIITEFMTYGNLLD------YLRECNRQEVSAVVLLYMATQISSAME 125
Query: 142 ---SMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYI---AP 195
+HRDL N +N L+KV DFG + L Y G+ F I AP
Sbjct: 126 YLEKKNFIHRDLAARN---CLVGENHLVKVADFGLSRLMTGDT-YTAHAGAKFPIKWTAP 181
Query: 196 EVLR-RRYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQG 240
E L ++ + D+W+ GV+L+ + + G+ P+ Y+ + +
Sbjct: 182 ESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKD 228
|
| >1q80_A SCP, sarcoplasmic calcium-binding protein; all-alpha, metal binding protein; NMR {Neanthes diversicolor} SCOP: a.39.1.5 PDB: 2scp_A Length = 174 | Back alignment and structure |
|---|
Score = 72.8 bits (179), Expect = 2e-15
Identities = 27/159 (16%), Positives = 60/159 (37%), Gaps = 26/159 (16%)
Query: 322 DEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSM--LTEFDVKHLMEAVKNS----- 374
D Q +K F +D DK+G ++ + + + + K LM+++
Sbjct: 2 DLWVQKMKTYFNRIDFDKDGAITRMDFESMAERFAKESEMKAEHAKVLMDSLTGVWDNFL 61
Query: 375 ---------------STLESLC--ENLPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLA 417
++++ + + + L FR +DT+ + ++ E
Sbjct: 62 TAVAGGKGIDETTFINSMKEMVKNPEAKSVVEGPLPLFFRAVDTNEDNNISRDEYGIFFG 121
Query: 418 KLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIY 456
LG L+++ +A D + +G + EFV +D +
Sbjct: 122 MLG--LDKTMAPASFDAIDTNNDGLLSLEEFVIAGSDFF 158
|
| >2jul_A Calsenilin; EF-hand, calcium, LXXLL, DNA binding protein, dimer, alternative splicing, apoptosis, cytoplasm, endoplasmic reticulum, golgi apparatus; NMR {Mus musculus} Length = 256 | Back alignment and structure |
|---|
Score = 73.9 bits (181), Expect = 5e-15
Identities = 37/271 (13%), Positives = 72/271 (26%), Gaps = 45/271 (16%)
Query: 226 WAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRE 285
E K + G + D P + R T+ R W+
Sbjct: 4 TKEAVKAS-----DGNLLGDPGRIPLSKRESIKWQRPRFTRQALMRCCL-----IKWILS 53
Query: 286 SGEASD---DTSVILRMKQFRRMNKLKKLTIKVIVEYLPDEETQALKEKFIEMDTDKNGT 342
S S + + L +L + +E Q+L F + G
Sbjct: 54 SAAPQGSDSSDSELELSTVRHQPEGLDQLQAQ---TKFTKKELQSLYRGF--KNECPTGL 108
Query: 343 LSYDELRAGLTKVGSMLTE-FDVKHLMEAVKNSST--------LESLCENLPTKEKQKLM 393
+ D + ++ L A + L L +KL
Sbjct: 109 VDEDTFKLIYSQFFPQGDATTYAHFLFNAFDADGNGAIHFEDFVVGLSILLRGTVHEKLK 168
Query: 394 EKFREMDTDNSDTLTLSEL----KAGLAKLGSALEESE--------VNQYMEAGDIDGNG 441
F D + +T E+ K+ +G V ++ + D + +G
Sbjct: 169 WAFNLYDINKDGCITKEEMLAIMKSIYDMMGRHTYPILREDAPLEHVERFFQKMDRNQDG 228
Query: 442 NIDSIEFVNLMTDIYKLETPELLEKAFQYLD 472
+ EF+ + ++ + Q +
Sbjct: 229 VVTIDEFLETC-----QKDENIM-NSMQLFE 253
|
| >2joj_A Centrin protein; N-terminal domain, centrin solution structure, EF-hand calcium binding protein, cell cycle; NMR {Euplotes octocarinatus} Length = 77 | Back alignment and structure |
|---|
Score = 68.7 bits (169), Expect = 5e-15
Identities = 22/70 (31%), Positives = 41/70 (58%)
Query: 384 LPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNI 443
L ++KQ++ E F DT+ + ++ ELK + LG +++ E+ + M D +GNG I
Sbjct: 1 LSEEQKQEIKEAFDLFDTNKTGSIDYHELKVAMRALGFDVKKPEILELMNEYDREGNGYI 60
Query: 444 DSIEFVNLMT 453
+F+++MT
Sbjct: 61 GFDDFLDIMT 70
|
| >2joj_A Centrin protein; N-terminal domain, centrin solution structure, EF-hand calcium binding protein, cell cycle; NMR {Euplotes octocarinatus} Length = 77 | Back alignment and structure |
|---|
Score = 52.1 bits (126), Expect = 4e-09
Identities = 16/52 (30%), Positives = 29/52 (55%)
Query: 320 LPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAV 371
L +E+ Q +KE F DT+K G++ Y EL+ + +G + + ++ LM
Sbjct: 1 LSEEQKQEIKEAFDLFDTNKTGSIDYHELKVAMRALGFDVKKPEILELMNEY 52
|
| >1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495 | Back alignment and structure |
|---|
Score = 75.2 bits (185), Expect = 1e-14
Identities = 50/227 (22%), Positives = 90/227 (39%), Gaps = 28/227 (12%)
Query: 27 FGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNV 86
LG GQ+G Y + A K++ K+ M + + +E + + PN+
Sbjct: 224 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTM--EVEEFL-KEAAVMKEIK-HPNL 278
Query: 87 VEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGY--NSERDAATVLRAIVNAVNVC---- 140
V+ E +++ E G+L D Y R + + + A +
Sbjct: 279 VQLLGVCTREPPFYIITEFMTYGNLLD------YLRECNRQEVSAVVLLYMATQISSAME 332
Query: 141 --HSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYI---AP 195
+HR+L N +N L+KV DFG + L Y G+ F I AP
Sbjct: 333 YLEKKNFIHRNLAARN---CLVGENHLVKVADFGLSRLMTGDT-YTAHAGAKFPIKWTAP 388
Query: 196 EVLR-RRYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQG 240
E L ++ + D+W+ GV+L+ + + G+ P+ Y+ + +
Sbjct: 389 ESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKD 435
|
| >2zfd_A Calcineurin B-like protein 2; calcium binding protein, protein-protein complex, ATP-bindin kinase, nucleotide-binding; 1.20A {Arabidopsis thaliana} SCOP: a.39.1.5 PDB: 1uhn_A Length = 226 | Back alignment and structure |
|---|
Score = 72.2 bits (177), Expect = 1e-14
Identities = 30/176 (17%), Positives = 62/176 (35%), Gaps = 24/176 (13%)
Query: 298 RMKQFRRMNKLKKLTIKVIVEYLPDEETQALKEKFIEMDTD--KNGTLSYDELRAGLTKV 355
+ +++ L + E +AL E F ++ + +G ++ +E + L K
Sbjct: 20 DLDLYKQSGGLGDPELLARDTVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKT 79
Query: 356 GSMLTEFDVKHLMEAVKNSST-----------LESLCENLPTKEKQKLMEKFREMDTDNS 404
+ F + + L N P +K F+ D
Sbjct: 80 NKKESLF-ADRVFDLFDTKHNGILGFEEFARALSVFHPNAPIDDKIHFS--FQLYDLKQQ 136
Query: 405 DTLTLSEL----KAGLAKLGSALEESE----VNQYMEAGDIDGNGNIDSIEFVNLM 452
+ E+ A LA+ G L+++ +++ E D +G ID E+ +L+
Sbjct: 137 GFIERQEVKQMVVATLAESGMNLKDTVIEDIIDKTFEEADTKHDGKIDKEEWRSLV 192
|
| >2zfd_A Calcineurin B-like protein 2; calcium binding protein, protein-protein complex, ATP-bindin kinase, nucleotide-binding; 1.20A {Arabidopsis thaliana} SCOP: a.39.1.5 PDB: 1uhn_A Length = 226 | Back alignment and structure |
|---|
Score = 56.8 bits (137), Expect = 2e-09
Identities = 23/130 (17%), Positives = 43/130 (33%), Gaps = 18/130 (13%)
Query: 364 VKHLMEAV---------KNSSTLESL-----CENLPTKEKQKLMEKFREMDTD--NSDTL 407
+KHL +V K S L E + L E F+++ + + +
Sbjct: 8 IKHLCTSVLGCFDLDLYKQSGGLGDPELLARDTVFSVSEIEALYELFKKISSAVIDDGLI 67
Query: 408 TLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIYKLETPEL-LEK 466
E + L K E ++ + D NG + EF ++ + + +
Sbjct: 68 NKEEFQLALFKTNKK-ESLFADRVFDLFDTKHNGILGFEEFARALSVFHPNAPIDDKIHF 126
Query: 467 AFQYLDKNSD 476
+FQ D
Sbjct: 127 SFQLYDLKQQ 136
|
| >1wdc_C Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Z 1kqm_C* 1kwo_C* 1l2o_C* 1qvi_Z* 1s5g_Z* 1sr6_C 1b7t_Z 3jvt_C 3jtd_C 1kk8_C* 2ec6_C 1dfk_Z 1dfl_Z* 2w4t_Z 2w4v_Z 2w4w_Z 2otg_C* 2os8_C* 3pn7_C ... Length = 156 | Back alignment and structure |
|---|
Score = 69.9 bits (172), Expect = 2e-14
Identities = 30/147 (20%), Positives = 55/147 (37%), Gaps = 13/147 (8%)
Query: 320 LPDEETQALKEKFIEMD--TDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNSS-- 375
L +E LK+ F D ++G + +L +G DV + K
Sbjct: 3 LSQDEIDDLKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRNEDVFAVGGTHKMGEKS 62
Query: 376 -TLESLCE------NLPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEV 428
E + ME F+ D + ++ +EL+ L LG L + +V
Sbjct: 63 LPFEEFLPAYEGLMDCEQGTFADYMEAFKTFDREGQGFISGAELRHVLTALGERLSDEDV 122
Query: 429 NQYMEAGDI--DGNGNIDSIEFVNLMT 453
++ ++ D+ D GN+ +FV +
Sbjct: 123 DEIIKLTDLQEDLEGNVKYEDFVKKVM 149
|
| >1wdc_C Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Z 1kqm_C* 1kwo_C* 1l2o_C* 1qvi_Z* 1s5g_Z* 1sr6_C 1b7t_Z 3jvt_C 3jtd_C 1kk8_C* 2ec6_C 1dfk_Z 1dfl_Z* 2w4t_Z 2w4v_Z 2w4w_Z 2otg_C* 2os8_C* 3pn7_C ... Length = 156 | Back alignment and structure |
|---|
Score = 51.0 bits (123), Expect = 7e-08
Identities = 17/97 (17%), Positives = 28/97 (28%), Gaps = 5/97 (5%)
Query: 384 LPTKEKQKLMEKFREMD--TDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNG 441
L E L + F D + +L LG +V G
Sbjct: 3 LSQDEIDDLKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRNEDVFAVGGT-HKMGEK 61
Query: 442 NIDSIEFVNLMTDIYKLE--TPELLEKAFQYLDKNSD 476
++ EF+ + E T +AF+ D+
Sbjct: 62 SLPFEEFLPAYEGLMDCEQGTFADYMEAFKTFDREGQ 98
|
| >1jba_A GCAP-2, protein (guanylate cyclase activating protein 2); EF-hand, calcium-binding protein, guanylyl cyclase regulation, lyase; NMR {Bos taurus} SCOP: a.39.1.5 Length = 204 | Back alignment and structure |
|---|
Score = 70.6 bits (173), Expect = 3e-14
Identities = 20/90 (22%), Positives = 38/90 (42%), Gaps = 2/90 (2%)
Query: 387 KEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSI 446
+ Q+ +KF ++ S TL + E K + V A D +G+ ID +
Sbjct: 22 AQLQEWYKKF--LEECPSGTLFMHEFKRFFKVPDNEEATQYVEAMFRAFDTNGDNTIDFL 79
Query: 447 EFVNLMTDIYKLETPELLEKAFQYLDKNSD 476
E+V + + + L+ F+ DK+ +
Sbjct: 80 EYVAALNLVLRGTLEHKLKWTFKIYDKDRN 109
|
| >1jba_A GCAP-2, protein (guanylate cyclase activating protein 2); EF-hand, calcium-binding protein, guanylyl cyclase regulation, lyase; NMR {Bos taurus} SCOP: a.39.1.5 Length = 204 | Back alignment and structure |
|---|
Score = 57.9 bits (140), Expect = 6e-10
Identities = 33/171 (19%), Positives = 60/171 (35%), Gaps = 47/171 (27%)
Query: 323 EETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNSSTLESLCE 382
+ Q +KF ++ +GTL E + + V+ +
Sbjct: 22 AQLQEWYKKF--LEECPSGTLFMHEFKRFFKVPDNEEATQYVEAM--------------- 64
Query: 383 NLPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGN 442
FR DT+ +T+ E A L + E ++ + D D NG
Sbjct: 65 -------------FRAFDTNGDNTIDFLEYVAALNLVLRGTLEHKLKWTFKIYDKDRNGC 111
Query: 443 IDSIEFVNLMTDIYKLETP-----------------ELLEKAFQYLDKNSD 476
ID E ++++ IYKL+ E++++ F +D+N D
Sbjct: 112 IDRQELLDIVESIYKLKKACSVEVEAEQQGKLLTPEEVVDRIFLLVDENGD 162
|
| >1jba_A GCAP-2, protein (guanylate cyclase activating protein 2); EF-hand, calcium-binding protein, guanylyl cyclase regulation, lyase; NMR {Bos taurus} SCOP: a.39.1.5 Length = 204 | Back alignment and structure |
|---|
Score = 49.0 bits (117), Expect = 5e-07
Identities = 20/99 (20%), Positives = 34/99 (34%), Gaps = 11/99 (11%)
Query: 320 LPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNSSTLES 379
L LK F D D+NG + EL + + + V+ E T E
Sbjct: 89 LRGTLEHKLKWTFKIYDKDRNGCIDRQELLDIVESIYKLKKACSVEVEAEQQGKLLTPEE 148
Query: 380 LCENLPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAK 418
+ + + F +D + L+L+E G +
Sbjct: 149 VVDRI-----------FLLVDENGDGQLSLNEFVEGARR 176
|
| >2be4_A Hypothetical protein LOC449832; DR.36843, BC083168, calicium binding, EF-hand superfamily, S genomics, protein structure initiative, PSI; 2.10A {Danio rerio} PDB: 2q4u_A Length = 272 | Back alignment and structure |
|---|
Score = 72.0 bits (176), Expect = 3e-14
Identities = 33/205 (16%), Positives = 61/205 (29%), Gaps = 50/205 (24%)
Query: 322 DEETQA-LKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFD----------VKHLMEA 370
A + + D D NG + EL + L D K M A
Sbjct: 6 ANLDAAGFLQIWQHFDADDNGYIEGKELDDFFRHMLKKLQPKDKITDERVQQIKKSFMSA 65
Query: 371 V-------------------KNSSTLESLCENLPTKEKQKLMEKFREMDTDNSDTLTLSE 411
+ + L P + M+ +R+ D D+S ++ +E
Sbjct: 66 YDATFDGRLQIEELANMILPQEENFLLIFRREAPLDNSVEFMKIWRKYDADSSGYISAAE 125
Query: 412 LKAGLAKLGSALEES--------EVNQYMEAGDIDGNGNIDSIEFVNLMTD--------- 454
LK L L ++ + M+ D + +G +D + ++
Sbjct: 126 LKNFLKDLFLQHKKKIPPNKLDEYTDAMMKIFDKNKDGRLDLNDLARILALQENFLLQFK 185
Query: 455 ---IYKLETPELLEKAFQYLDKNSD 476
++E EK F + D +
Sbjct: 186 MDASSQVERKRDFEKIFAHYDVSRT 210
|
| >2be4_A Hypothetical protein LOC449832; DR.36843, BC083168, calicium binding, EF-hand superfamily, S genomics, protein structure initiative, PSI; 2.10A {Danio rerio} PDB: 2q4u_A Length = 272 | Back alignment and structure |
|---|
Score = 55.8 bits (134), Expect = 8e-09
Identities = 21/169 (12%), Positives = 56/169 (33%), Gaps = 36/169 (21%)
Query: 321 PDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVG-----------------SMLTEFD 363
P + + + + + D D +G +S EL+ L + +M+ FD
Sbjct: 99 PLDNSVEFMKIWRKYDADSSGYISAAELKNFLKDLFLQHKKKIPPNKLDEYTDAMMKIFD 158
Query: 364 V-----------KHLMEAVKNSSTLESLCENLPTKEKQKLMEKFREMDTDNSDTLTLSEL 412
++ +N + + + K+ + F D + L E+
Sbjct: 159 KNKDGRLDLNDLARILALQENFLLQFKMDASSQVERKRDFEKIFAHYDVSRTGALEGPEV 218
Query: 413 KAGLAKLG----SALEESEVNQY----MEAGDIDGNGNIDSIEFVNLMT 453
+ + ++ +++++ + D++ +G I E +
Sbjct: 219 DGFVKDMMELVRPSISGGDLDKFRECLLTHCDMNKDGKIQKSELALCLG 267
|
| >3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267 | Back alignment and structure |
|---|
Score = 71.5 bits (176), Expect = 4e-14
Identities = 59/226 (26%), Positives = 101/226 (44%), Gaps = 28/226 (12%)
Query: 27 FGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNV 86
F + +G GQFG+ +L + + A K+I ++ M +E D I E ++ + LS P +
Sbjct: 12 FVQEIGSGQFGLVHLGYWLNKD-KVAIKTI-REGAM--SEEDFI-EEAEVMMKLS-HPKL 65
Query: 87 VEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVN-AVNVCH---- 141
V+ ++ + +V E E G L D Y + ++ ++VC
Sbjct: 66 VQLYGVCLEQAPICLVTEFMEHGCLSD------YLRTQRGLFAAETLLGMCLDVCEGMAY 119
Query: 142 --SMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYI---APE 196
V+HRDL N +N ++KV+DFG + Q Y G+ F + +PE
Sbjct: 120 LEEACVIHRDLAARN---CLVGENQVIKVSDFGMTRFVLDDQ-YTSSTGTKFPVKWASPE 175
Query: 197 VLR-RRYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQG 240
V RY + D+WS GV+++ + S G P+ + + I G
Sbjct: 176 VFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTG 221
|
| >3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283 | Back alignment and structure |
|---|
Score = 71.5 bits (176), Expect = 4e-14
Identities = 60/226 (26%), Positives = 98/226 (43%), Gaps = 28/226 (12%)
Query: 27 FGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNV 86
F + LG GQFGV A K I K+ M +E++ I E ++ + LS +
Sbjct: 28 FLKELGTGQFGVVKYGKWR-GQYDVAIKMI-KEGSM--SEDEFI-EEAKVMMNLS-HEKL 81
Query: 87 VEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVN-AVNVCH---- 141
V+ + + ++ E G L + Y E + ++ +VC
Sbjct: 82 VQLYGVCTKQRPIFIITEYMANGCLLN------YLREMRHRFQTQQLLEMCKDVCEAMEY 135
Query: 142 --SMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYI---APE 196
S +HRDL N +D ++KV+DFG + + + Y VGS F + PE
Sbjct: 136 LESKQFLHRDLAARN---CLVNDQGVVKVSDFGLSRYVLDDE-YTSSVGSKFPVRWSPPE 191
Query: 197 VLR-RRYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQG 240
VL ++ + DIW+ GV+++ + S G P+ T T + I QG
Sbjct: 192 VLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQG 237
|
| >2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326 | Back alignment and structure |
|---|
Score = 72.0 bits (177), Expect = 4e-14
Identities = 50/213 (23%), Positives = 89/213 (41%), Gaps = 33/213 (15%)
Query: 27 FGRMLGRGQFGVSYLCT----ENSTNRPYACKSIAKKPKMRLAENDMIRREIQI--RLYL 80
F + LG+G FG +C +++T A K + + D REI+I L
Sbjct: 45 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKL--QHSTEEHLRDFE-REIEILKSLQ- 100
Query: 81 SGQPNVVEFK--STYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVN 138
N+V++K + ++ME G L D + ++ ++ +
Sbjct: 101 --HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ-----KHKERIDHIKLLQYTSQ 153
Query: 139 VC------HSMGVMHRDLKPENFSFISRDDNALLKVTDFG-SALLFEEGQVYRDIVGSGF 191
+C + +HRDL N I ++ +K+ DFG + +L ++ + Y+
Sbjct: 154 ICKGMEYLGTKRYIHRDLATRN---ILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGES 210
Query: 192 YI---APEVLR-RRYGKEIDIWSAGVILYILLS 220
I APE L ++ D+WS GV+LY L +
Sbjct: 211 PIFWYAPESLTESKFSVASDVWSFGVVLYELFT 243
|
| >3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295 | Back alignment and structure |
|---|
Score = 71.6 bits (176), Expect = 5e-14
Identities = 49/213 (23%), Positives = 88/213 (41%), Gaps = 33/213 (15%)
Query: 27 FGRMLGRGQFGVSYLCT----ENSTNRPYACKSIAKKPKMRLAENDMIRREIQI--RLYL 80
F + LG+G FG +C +++T A K + + D REI+I L
Sbjct: 14 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKL--QHSTEEHLRDFE-REIEILKSLQ- 69
Query: 81 SGQPNVVEFK--STYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVN 138
N+V++K + ++ME G L D + ++ ++ +
Sbjct: 70 --HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ-----KHKERIDHIKLLQYTSQ 122
Query: 139 VC------HSMGVMHRDLKPENFSFISRDDNALLKVTDFGSA-LLFEEGQVYRDIVGSGF 191
+C + +HRDL N I ++ +K+ DFG +L ++ + ++
Sbjct: 123 ICKGMEYLGTKRYIHRDLATRN---ILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGES 179
Query: 192 YI---APEVLR-RRYGKEIDIWSAGVILYILLS 220
I APE L ++ D+WS GV+LY L +
Sbjct: 180 PIFWYAPESLTESKFSVASDVWSFGVVLYELFT 212
|
| >3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327 | Back alignment and structure |
|---|
Score = 71.6 bits (176), Expect = 6e-14
Identities = 57/236 (24%), Positives = 90/236 (38%), Gaps = 34/236 (14%)
Query: 27 FGRMLGRGQFGVSYLCT----ENSTNRPYACKSIAKKPKMRLAENDMIRREIQI--RLYL 80
+ LG+G FG LC ++T A K + + + D REIQI L+
Sbjct: 27 YISQLGKGNFGSVELCRYDPLGDNTGALVAVKQL--QHSGPDQQRDFQ-REIQILKALH- 82
Query: 81 SGQPNVVEFK--STYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVN 138
+V+++ S ++ +VME G L D + R R ++ +
Sbjct: 83 --SDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQ-----RHRARLDASRLLLYSSQ 135
Query: 139 VC------HSMGVMHRDLKPENFSFISRDDNALLKVTDFGSA-LLFEEGQVYRDIVGSGF 191
+C S +HRDL N I + A +K+ DFG A LL + Y
Sbjct: 136 ICKGMEYLGSRRCVHRDLAARN---ILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQS 192
Query: 192 YI---APEVLR-RRYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQGEI 242
I APE L + ++ D+WS GV+LY L + + +
Sbjct: 193 PIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVP 248
|
| >3akb_A Putative calcium binding protein; EF-hand, metal binding protein; 1.50A {Streptomyces coelicolor} PDB: 3aka_A Length = 166 | Back alignment and structure |
|---|
Score = 68.6 bits (168), Expect = 7e-14
Identities = 24/162 (14%), Positives = 43/162 (26%), Gaps = 32/162 (19%)
Query: 323 EETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNSST------ 376
E + + +F D D NG + + + + +A+ +
Sbjct: 1 EYERRIAARFTTFDQDGNGHIDRSDFSGAAKAMLAEFGVAARSDRGQALYGGAEALWQGL 60
Query: 377 ------------------------LESLCENLPTKEKQKLMEKFREMDTDNSDTLTLSEL 412
L + + L DTD +T+++
Sbjct: 61 AGIADRDGDQRITREEFVTGAVKRLRDKPDRFAEMARPFLHAALGVADTDGDGAVTVADT 120
Query: 413 KAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTD 454
L G + E Q A D DG+G + E V
Sbjct: 121 ARALTAFG--VPEDLARQAAAALDTDGDGKVGETEIVPAFAR 160
|
| >3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327 | Back alignment and structure |
|---|
Score = 71.5 bits (176), Expect = 7e-14
Identities = 50/231 (21%), Positives = 86/231 (37%), Gaps = 29/231 (12%)
Query: 27 FGRMLGRGQFGV----SYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSG 82
++LG G FG ++ P A K + ++ A +++ E + +
Sbjct: 19 KIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKEL-REATSPKANKEIL-DEAYVMASVD- 75
Query: 83 QPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVN-AVNVCH 141
P+V T V ++ +L G L D Y E + ++N V +
Sbjct: 76 NPHVCRLLGICLTST-VQLITQLMPFGCLLD------YVREHKDNIGSQYLLNWCVQIAK 128
Query: 142 ------SMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYI-- 193
++HRDL N + +K+TDFG A L + G I
Sbjct: 129 GMNYLEDRRLVHRDLAARN---VLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 185
Query: 194 -APEVLR-RRYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQGE 241
A E + R Y + D+WS GV ++ L++ G P+ + +GE
Sbjct: 186 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE 236
|
| >3ll8_B Calcineurin subunit B type 1; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 1mf8_B* 2p6b_B 1aui_B 1m63_B* 1tco_B* Length = 155 | Back alignment and structure |
|---|
Score = 68.0 bits (167), Expect = 8e-14
Identities = 33/157 (21%), Positives = 60/157 (38%), Gaps = 32/157 (20%)
Query: 323 EETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGS-----MLTEFDVKH----------L 367
+E + L ++F ++D D +G+LS +E + + ++ FD
Sbjct: 3 DEIKRLGKRFKKLDLDNSGSLSVEEFMSLPELQQNPLVQRVIDIFDTDGNGEVDFKEFIE 62
Query: 368 MEAVKNSSTLESLCENLPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLA-----KLGSA 422
+ + ++QKL FR D D ++ EL L L
Sbjct: 63 GVSQFSVK----------GDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDT 112
Query: 423 LEESEVNQYMEAGDIDGNGNIDSIEFVNLM--TDIYK 457
+ V++ + D DG+G I EF ++ DI+K
Sbjct: 113 QLQQIVDKTIINADKDGDGRISFEEFCAVVGGLDIHK 149
|
| >3ll8_B Calcineurin subunit B type 1; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 1mf8_B* 2p6b_B 1aui_B 1m63_B* 1tco_B* Length = 155 | Back alignment and structure |
|---|
Score = 66.9 bits (164), Expect = 2e-13
Identities = 24/91 (26%), Positives = 46/91 (50%), Gaps = 5/91 (5%)
Query: 387 KEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSI 446
E ++L ++F+++D DNS +L++ E + V + ++ D DGNG +D
Sbjct: 3 DEIKRLGKRFKKLDLDNSGSLSVEEFMSLPELQQ----NPLVQRVIDIFDTDGNGEVDFK 58
Query: 447 EFVNLMTD-IYKLETPELLEKAFQYLDKNSD 476
EF+ ++ K + + L AF+ D + D
Sbjct: 59 EFIEGVSQFSVKGDKEQKLRFAFRIYDMDKD 89
|
| >1wlz_A DJBP, CAP-binding protein complex interacting protein 1 isoform A; EF-hand like, unknown function; 1.60A {Homo sapiens} SCOP: a.39.1.7 Length = 105 | Back alignment and structure |
|---|
Score = 66.3 bits (162), Expect = 8e-14
Identities = 10/68 (14%), Positives = 30/68 (44%)
Query: 386 TKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDS 445
T + ++F DT ++T++ E +A + L + + ++ ++ G +
Sbjct: 20 TSHYHAITQEFENFDTMKTNTISREEFRAICNRRVQILTDEQFDRLWNEMPVNAKGRLKY 79
Query: 446 IEFVNLMT 453
+F++ +
Sbjct: 80 PDFLSRFS 87
|
| >1wlz_A DJBP, CAP-binding protein complex interacting protein 1 isoform A; EF-hand like, unknown function; 1.60A {Homo sapiens} SCOP: a.39.1.7 Length = 105 | Back alignment and structure |
|---|
Score = 50.6 bits (121), Expect = 4e-08
Identities = 13/49 (26%), Positives = 22/49 (44%)
Query: 323 EETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAV 371
A+ ++F DT K T+S +E RA + +LT+ L +
Sbjct: 21 SHYHAITQEFENFDTMKTNTISREEFRAICNRRVQILTDEQFDRLWNEM 69
|
| >2ct9_A Calcium-binding protein P22; EF-hand, metal binding protein; 2.20A {Rattus norvegicus} PDB: 2e30_A Length = 208 | Back alignment and structure |
|---|
Score = 69.0 bits (169), Expect = 9e-14
Identities = 35/191 (18%), Positives = 66/191 (34%), Gaps = 33/191 (17%)
Query: 303 RRMNKLKKLTIKVIVE--YLPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLT 360
R L+ ++ I + + L +F +D +NGTLS ++ + + L
Sbjct: 4 RASTLLRDEELEEIKKETGFSHSQITRLYSRFTSLDKGENGTLSREDFQRIPELAINPLG 63
Query: 361 E-----FDVK---------------HLMEAVKNSSTLESLCENLPTKEKQKLMEKFREMD 400
+ F + H N + + KL FR D
Sbjct: 64 DRIINAFFSEGEDQVNFRGFMRTLAHFRPIEDNEKSKDVNGPEPLNSRSNKLHFAFRLYD 123
Query: 401 TDNSDTLTLSELKAGL-AKLGSALEESEVNQY----MEAGDIDGNGNIDSIEFVNLMTDI 455
D D ++ EL L +G + + ++ ++ D DG+ I EFV ++
Sbjct: 124 LDKDDKISRDELLQVLRMMVGVNISDEQLGSIADRTIQEADQDGDSAISFTEFVKVL--- 180
Query: 456 YKLETPELLEK 466
E ++ +K
Sbjct: 181 ---EKVDVEQK 188
|
| >2ct9_A Calcium-binding protein P22; EF-hand, metal binding protein; 2.20A {Rattus norvegicus} PDB: 2e30_A Length = 208 | Back alignment and structure |
|---|
Score = 52.5 bits (126), Expect = 5e-08
Identities = 17/139 (12%), Positives = 46/139 (33%), Gaps = 31/139 (22%)
Query: 354 KVGSMLTEFDVKHLMEAVKNSSTLESLCENLPTKEKQKLMEKFREMDTDNSDTLTLSELK 413
+ ++L + +++ + + + +L +F +D + TL+ + +
Sbjct: 4 RASTLLRDEELEEIKK-----------ETGFSHSQITRLYSRFTSLDKGENGTLSREDFQ 52
Query: 414 AGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIYKLETPEL---------- 463
+ L + + + A +G ++ F+ + +E E
Sbjct: 53 RIPELAINPLGD----RIINAFFSEGEDQVNFRGFMRTLAHFRPIEDNEKSKDVNGPEPL 108
Query: 464 ------LEKAFQYLDKNSD 476
L AF+ D + D
Sbjct: 109 NSRSNKLHFAFRLYDLDKD 127
|
| >3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268 | Back alignment and structure |
|---|
Score = 69.9 bits (172), Expect = 1e-13
Identities = 59/226 (26%), Positives = 93/226 (41%), Gaps = 28/226 (12%)
Query: 27 FGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNV 86
+ LG GQFGV L A K I K+ M +E++ +E Q + LS P +
Sbjct: 12 LLKELGSGQFGVVKLGKWK-GQYDVAVKMI-KEGSM--SEDEFF-QEAQTMMKLS-HPKL 65
Query: 87 VEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVN-AVNVCH---- 141
V+F E +++V E G L + Y ++ +VC
Sbjct: 66 VKFYGVCSKEYPIYIVTEYISNGCLLN------YLRSHGKGLEPSQLLEMCYDVCEGMAF 119
Query: 142 --SMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYI---APE 196
S +HRDL N D + +KV+DFG + Q VG+ F + APE
Sbjct: 120 LESHQFIHRDLAARN---CLVDRDLCVKVSDFGMTRYVLDDQYVSS-VGTKFPVKWSAPE 175
Query: 197 VLR-RRYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQG 240
V +Y + D+W+ G++++ + S G P+ T + QG
Sbjct: 176 VFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQG 221
|
| >1tiz_A Calmodulin-related protein, putative; helix-turn-helix, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} SCOP: a.39.1.5 Length = 67 | Back alignment and structure |
|---|
Score = 64.8 bits (159), Expect = 1e-13
Identities = 13/62 (20%), Positives = 28/62 (45%)
Query: 392 LMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNL 451
F + D + L+L E + + ++ ++ E D+DGNG +++ EF +
Sbjct: 3 AKRVFEKFDKNKDGKLSLDEFREVALAFSPYFTQEDIVKFFEEIDVDGNGELNADEFTSC 62
Query: 452 MT 453
+
Sbjct: 63 IE 64
|
| >1tiz_A Calmodulin-related protein, putative; helix-turn-helix, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} SCOP: a.39.1.5 Length = 67 | Back alignment and structure |
|---|
Score = 44.8 bits (107), Expect = 1e-06
Identities = 13/44 (29%), Positives = 19/44 (43%)
Query: 328 LKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAV 371
K F + D +K+G LS DE R T+ D+ E +
Sbjct: 3 AKRVFEKFDKNKDGKLSLDEFREVALAFSPYFTQEDIVKFFEEI 46
|
| >3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313 | Back alignment and structure |
|---|
Score = 70.8 bits (174), Expect = 1e-13
Identities = 50/233 (21%), Positives = 89/233 (38%), Gaps = 24/233 (10%)
Query: 27 FGRMLGRGQFGVSYLCT---ENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQ 83
G++LG G+FG E+ T+ A K++ K E + E S
Sbjct: 38 LGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTM-KLDNSSQREIEEFLSEAACMKDFS-H 95
Query: 84 PNVVE-----FKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVN 138
PNV+ + + + V++ + GDL ++ + + + V+
Sbjct: 96 PNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVD 155
Query: 139 VCH------SMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFY 192
+ + +HRDL N D+ + V DFG + G YR +
Sbjct: 156 IALGMEYLSNRNFLHRDLAARN---CMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMP 212
Query: 193 I---APEVLR-RRYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQG 240
+ A E L R Y + D+W+ GV ++ + + G+ P+ YD +L G
Sbjct: 213 VKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYDYLLHG 265
|
| >3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A Length = 296 | Back alignment and structure |
|---|
Score = 70.5 bits (173), Expect = 1e-13
Identities = 59/236 (25%), Positives = 95/236 (40%), Gaps = 33/236 (13%)
Query: 24 HYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQ 83
Y GR +G G FG YL T+ + A K K ++ + E +I + G
Sbjct: 10 RYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVK-----TKHPQLHIESKIYKMMQGG 64
Query: 84 PNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRA---IVNAVNVC 140
+ + + +VMEL G L D TVL +++ +
Sbjct: 65 VGIPTIRWCGAEGDYNVMVMELL-GPSLEDLFNFCSRKF--SLKTVLLLADQMISRIEYI 121
Query: 141 HSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQV-----YRD---IVGSGFY 192
HS +HRD+KP+NF L+ + DFG A + + + YR+ + G+ Y
Sbjct: 122 HSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARY 181
Query: 193 IAPEVLRRRYGKEI----DIWSAG-VILYILLSGVPPFW----AETKKGTYDAILQ 239
+ + G E D+ S G V++Y L +P W A TK+ Y+ I +
Sbjct: 182 AS---INTHLGIEQSRRDDLESLGYVLMYFNLGSLP--WQGLKAATKRQKYERISE 232
|
| >4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302 | Back alignment and structure |
|---|
Score = 70.0 bits (172), Expect = 2e-13
Identities = 53/213 (24%), Positives = 91/213 (42%), Gaps = 32/213 (15%)
Query: 27 FGRMLGRGQFGVSYLCT----ENSTNRPYACKSIAKKPKMRLAENDMIRREIQI--RLYL 80
R LG G FG LC ++T A KS+ KP+ +++EI+I LY
Sbjct: 25 RIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSL--KPESGGNHIADLKKEIEILRNLY- 81
Query: 81 SGQPNVVEFK--STYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVN 138
N+V++K T + + ++ME G L + + ++ + + + AV
Sbjct: 82 --HENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLP-----KNKNKINLKQQLKYAVQ 134
Query: 139 VC------HSMGVMHRDLKPENFSFISRDDNALLKVTDFG-SALLFEEGQVYRDIVGSGF 191
+C S +HRDL N + + +K+ DFG + + + + Y
Sbjct: 135 ICKGMDYLGSRQYVHRDLAARN---VLVESEHQVKIGDFGLTKAIETDKEYYTVKDDRDS 191
Query: 192 YI---APEVLR-RRYGKEIDIWSAGVILYILLS 220
+ APE L ++ D+WS GV L+ LL+
Sbjct: 192 PVFWYAPECLMQSKFYIASDVWSFGVTLHELLT 224
|
| >2opo_A Polcalcin CHE A 3; calcium-binding protein, dimer, domain-swapping, EF-hand; 1.75A {Chenopodium album} SCOP: a.39.1.10 PDB: 1h4b_A Length = 86 | Back alignment and structure |
|---|
Score = 65.0 bits (159), Expect = 2e-13
Identities = 22/87 (25%), Positives = 34/87 (39%), Gaps = 3/87 (3%)
Query: 382 ENLPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNG 441
++ F+ DT+ ++ SEL L LGS + EV + M D DG+G
Sbjct: 3 AEDTPQDIADRERIFKRFDTNGDGKISSSELGDALKTLGSVTPD-EVRRMMAEIDTDGDG 61
Query: 442 NIDSIEFVNLMTDIYKLETPELLEKAF 468
I EF + + + K F
Sbjct: 62 FISFDEFTDFAR--ANRGLVKDVSKIF 86
|
| >2opo_A Polcalcin CHE A 3; calcium-binding protein, dimer, domain-swapping, EF-hand; 1.75A {Chenopodium album} SCOP: a.39.1.10 PDB: 1h4b_A Length = 86 | Back alignment and structure |
|---|
Score = 44.6 bits (106), Expect = 2e-06
Identities = 12/56 (21%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Query: 316 IVEYLPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAV 371
+ ++ + F DT+ +G +S EL L +G +T +V+ +M +
Sbjct: 1 MAAEDTPQDIADRERIFKRFDTNGDGKISSSELGDALKTLG-SVTPDEVRRMMAEI 55
|
| >1ggw_A Protein (CDC4P); light chain, cytokinesis, cell cycle, EF-hand; NMR {Schizosaccharomyces pombe} SCOP: a.39.1.5 Length = 140 | Back alignment and structure |
|---|
Score = 66.0 bits (162), Expect = 3e-13
Identities = 22/138 (15%), Positives = 51/138 (36%), Gaps = 8/138 (5%)
Query: 323 EETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNSSTLESLCE 382
+ K+ F D G + + L G T ++ + + +E +
Sbjct: 2 TDDSPYKQAFSLFDRHGTGRIPKTSIGDLLRACGQNPTLAEITEIESTLPAEVDMEQFLQ 61
Query: 383 NLPTKEKQK-------LMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAG 435
L ++ F+ D D + + + EL+ L LG L E+++ ++
Sbjct: 62 VLNRPNGFDMPGDPEEFVKGFQVFDKDATGMIGVGELRYVLTSLGEKLSNEEMDELLKGV 121
Query: 436 DIDGNGNIDSIEFVNLMT 453
+ +G ++ +FV ++
Sbjct: 122 PVK-DGMVNYHDFVQMIL 138
|
| >1ggw_A Protein (CDC4P); light chain, cytokinesis, cell cycle, EF-hand; NMR {Schizosaccharomyces pombe} SCOP: a.39.1.5 Length = 140 | Back alignment and structure |
|---|
Score = 53.3 bits (129), Expect = 6e-09
Identities = 14/94 (14%), Positives = 33/94 (35%), Gaps = 7/94 (7%)
Query: 386 TKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDS 445
+ + + F D + + + + L G +E+ + + +D
Sbjct: 1 STDDSPYKQAFSLFDRHGTGRIPKTSIGDLLRACGQNPTLAEITEI----ESTLPAEVDM 56
Query: 446 IEFVNLMTDIYKLETPELLE---KAFQYLDKNSD 476
+F+ ++ + P E K FQ DK++
Sbjct: 57 EQFLQVLNRPNGFDMPGDPEEFVKGFQVFDKDAT 90
|
| >2bec_A Calcineurin B homologous protein 2; calcineurin-homologous protein, calcium-binding protein, NHE1 regulating protein; 2.70A {Homo sapiens} Length = 202 | Back alignment and structure |
|---|
Score = 67.5 bits (165), Expect = 3e-13
Identities = 27/176 (15%), Positives = 59/176 (33%), Gaps = 28/176 (15%)
Query: 319 YLPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGS-----MLTEFDVKH------- 366
L +F +D +K G LS +L+ + ++ F
Sbjct: 22 GFSQASLLRLHHRFRALDRNKKGYLSRMDLQQIGALAVNPLGDRIIESFFPDGSQRVDFP 81
Query: 367 ---------LMEAVKNSSTLESLCENLPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLA 417
+++ T + + KL F+ D D ++ E+ L
Sbjct: 82 GFVRVLAHFRPVEDEDTETQDPKKPEPLNSRRNKLHYAFQLYDLDRDGKISRHEMLQVLR 141
Query: 418 KL-GSALEESEVNQY----MEAGDIDGNGNIDSIEFVNLM--TDIYKLETPELLEK 466
+ G + E ++ ++ D DG+G + +EF + D+ + + +L+
Sbjct: 142 LMVGVQVTEEQLENIADRTVQEADEDGDGAVSFVEFTKSLEKMDVEQKMSIRILKH 197
|
| >2bec_A Calcineurin B homologous protein 2; calcineurin-homologous protein, calcium-binding protein, NHE1 regulating protein; 2.70A {Homo sapiens} Length = 202 | Back alignment and structure |
|---|
Score = 52.8 bits (127), Expect = 3e-08
Identities = 21/113 (18%), Positives = 39/113 (34%), Gaps = 21/113 (18%)
Query: 381 CENLPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGN 440
+L +FR +D + L+ +L+ A + L + + +E+ DG+
Sbjct: 20 ETGFSQASLLRLHHRFRALDRNKKGYLSRMDLQQIGALAVNPLGD----RIIESFFPDGS 75
Query: 441 GNIDSIEFVNLMTDIYKLETP-----------------ELLEKAFQYLDKNSD 476
+D FV ++ +E L AFQ D + D
Sbjct: 76 QRVDFPGFVRVLAHFRPVEDEDTETQDPKKPEPLNSRRNKLHYAFQLYDLDRD 128
|
| >1pva_A Parvalbumin; calcium binding; 1.65A {Esox lucius} SCOP: a.39.1.4 PDB: 2pas_A 3pat_A Length = 110 | Back alignment and structure |
|---|
Score = 64.9 bits (159), Expect = 3e-13
Identities = 28/106 (26%), Positives = 46/106 (43%), Gaps = 9/106 (8%)
Query: 356 GSMLTEFDVKHLMEAVKNSSTLE-----SLCENLPTKEKQKLMEKFREMDTDNSDTLTLS 410
+L D+K ++AVK + +L L + + F+ +D D S +
Sbjct: 4 KDLLKADDIKKALDAVKAEGSFNHKKFFALV-GLKAMSANDVKKVFKAIDADASGFIEEE 62
Query: 411 ELKAGLAKL---GSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMT 453
ELK L G L ++E +++A D DG+G I EF L+
Sbjct: 63 ELKFVLKSFAADGRDLTDAETKAFLKAADKDGDGKIGIDEFETLVH 108
|
| >1pva_A Parvalbumin; calcium binding; 1.65A {Esox lucius} SCOP: a.39.1.4 PDB: 2pas_A 3pat_A Length = 110 | Back alignment and structure |
|---|
Score = 46.4 bits (111), Expect = 9e-07
Identities = 9/54 (16%), Positives = 27/54 (50%), Gaps = 4/54 (7%)
Query: 423 LEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIYKLETPELLEKAFQYLDKNSD 476
L+ ++ + ++A + G+ + +F L+ K + ++K F+ +D ++
Sbjct: 7 LKADDIKKALDA--VKAEGSFNHKKFFALVGL--KAMSANDVKKVFKAIDADAS 56
|
| >1bu3_A Calcium-binding protein; 1.65A {Merluccius bilinearis} SCOP: a.39.1.4 Length = 109 | Back alignment and structure |
|---|
Score = 64.6 bits (158), Expect = 4e-13
Identities = 26/106 (24%), Positives = 46/106 (43%), Gaps = 9/106 (8%)
Query: 356 GSMLTEFDVKHLMEAVKNSSTLE-----SLCENLPTKEKQKLMEKFREMDTDNSDTLTLS 410
+L + DV ++A + + + + L K + + F +D D S +
Sbjct: 4 SGILADADVAAALKACEAADSFNYKAFFAKV-GLTAKSADDIKKAFFVIDQDKSGFIEED 62
Query: 411 ELKAGLAKL---GSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMT 453
ELK L AL ++E +++AGD DG+G I E+ L+
Sbjct: 63 ELKLFLQVFSAGARALTDAETKAFLKAGDSDGDGAIGVDEWAALVK 108
|
| >1bu3_A Calcium-binding protein; 1.65A {Merluccius bilinearis} SCOP: a.39.1.4 Length = 109 | Back alignment and structure |
|---|
Score = 46.9 bits (112), Expect = 7e-07
Identities = 9/58 (15%), Positives = 24/58 (41%), Gaps = 4/58 (6%)
Query: 419 LGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIYKLETPELLEKAFQYLDKNSD 476
L +++V ++A + + + F + K + ++KAF +D++
Sbjct: 3 FSGILADADVAAALKA--CEAADSFNYKAFFAKVGLTAKSA--DDIKKAFFVIDQDKS 56
|
| >3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318 | Back alignment and structure |
|---|
Score = 68.9 bits (169), Expect = 5e-13
Identities = 55/213 (25%), Positives = 91/213 (42%), Gaps = 34/213 (15%)
Query: 27 FGRMLGRGQFGVSYLC----TENSTNRPYACKSIAKKPKMRLAENDMIRREIQI--RLYL 80
R LG G FG L T + T A K++ K + +EI I LY
Sbjct: 35 KIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKAL-KADAGPQHRSGWK-QEIDILRTLY- 91
Query: 81 SGQPNVVEFK--STYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVN 138
+++++K ++ +VME G L D + R + + + ++ A
Sbjct: 92 --HEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYL-------PRHSIGLAQLLLFAQQ 142
Query: 139 VC------HSMGVMHRDLKPENFSFISRDDNALLKVTDFG-SALLFEEGQVYRDIVGSGF 191
+C H+ +HRDL N + D++ L+K+ DFG + + E + YR
Sbjct: 143 ICEGMAYLHAQHYIHRDLAARN---VLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDS 199
Query: 192 YI---APEVLR-RRYGKEIDIWSAGVILYILLS 220
+ APE L+ ++ D+WS GV LY LL+
Sbjct: 200 PVFWYAPECLKEYKFYYASDVWSFGVTLYELLT 232
|
| >2d58_A Allograft inflammatory factor 1; EF-hand, metal binding protein; 1.90A {Homo sapiens} Length = 107 | Back alignment and structure |
|---|
Score = 64.3 bits (157), Expect = 6e-13
Identities = 13/72 (18%), Positives = 27/72 (37%)
Query: 382 ENLPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNG 441
+ + + EK+ E D + + + + LK L KLG E+ + +
Sbjct: 24 DEDLPSKLEGFKEKYMEFDLNGNGDIDIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSGE 83
Query: 442 NIDSIEFVNLMT 453
+F+ +M
Sbjct: 84 TFSYPDFLRMML 95
|
| >2d58_A Allograft inflammatory factor 1; EF-hand, metal binding protein; 1.90A {Homo sapiens} Length = 107 | Back alignment and structure |
|---|
Score = 57.8 bits (140), Expect = 9e-11
Identities = 19/77 (24%), Positives = 38/77 (49%), Gaps = 3/77 (3%)
Query: 298 RMKQFRRMNKLKKLTI---KVIVEYLPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTK 354
+ +Q R++++ K + K + + + KEK++E D + NG + L+ L K
Sbjct: 1 KAQQEERLDEINKQFLDDPKYSSDEDLPSKLEGFKEKYMEFDLNGNGDIDIMSLKRMLEK 60
Query: 355 VGSMLTEFDVKHLMEAV 371
+G T ++K L+ V
Sbjct: 61 LGVPKTHLELKKLIGEV 77
|
| >3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323 | Back alignment and structure |
|---|
Score = 68.5 bits (168), Expect = 6e-13
Identities = 48/234 (20%), Positives = 85/234 (36%), Gaps = 25/234 (10%)
Query: 27 FGRMLGRGQFGVSYLCT---ENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQ 83
GRMLG+G+FG E+ + A K + K + ++ + RE
Sbjct: 27 LGRMLGKGEFGSVREAQLKQEDGSFVKVAVKML-KADIIASSDIEEFLREAACMKEFD-H 84
Query: 84 PNVVEF------KSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAV 137
P+V + V++ + GDL ++A + + V
Sbjct: 85 PHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMV 144
Query: 138 NVCH------SMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGF 191
++ S +HRDL N ++ + V DFG + G YR S
Sbjct: 145 DIACGMEYLSSRNFIHRDLAARN---CMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKL 201
Query: 192 YI---APEVLR-RRYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQG 240
+ A E L Y D+W+ GV ++ +++ G P+ Y+ ++ G
Sbjct: 202 PVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYNYLIGG 255
|
| >2ccm_A Calexcitin; EF hand, calcium, signaling protein; 1.8A {Loligo pealeii} Length = 191 | Back alignment and structure |
|---|
Score = 66.4 bits (162), Expect = 6e-13
Identities = 22/184 (11%), Positives = 48/184 (26%), Gaps = 41/184 (22%)
Query: 315 VIVEYLPDEETQALKEKFIEM-DTDKNGTLSYDELRAGLTKVGS---------------- 357
+ L D + + F D + +G + +D+ + K+ +
Sbjct: 1 MAAHQLSDFQRNKILRVFNTFYDCNHDGVIEWDDFELAIKKICNLHSWPTDGKKHNEARA 60
Query: 358 --------MLTEFDV-----------KHLMEAVKNSSTLESLCENLPTKEKQKLMEKFRE 398
+ D + S E+LP + + F
Sbjct: 61 TLKLIWDGLRKYADENEDEQVTKEEWLKMWAECVKSVEKG---ESLPEWLTKYMNFMFDV 117
Query: 399 MDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIYKL 458
DT + + E G + +S+ + + G + F L T+ +
Sbjct: 118 NDTSGDNIIDKHEYSTVYMSYG--IPKSDCDAAFDTLSDGGKTMVTREIFARLWTEYFVS 175
Query: 459 ETPE 462
Sbjct: 176 NDRG 179
|
| >2r2i_A Guanylyl cyclase-activating protein 1; EF hand, GCAP, guanylate cyclase activating protein, GCAP1, GCAP-1, calcium, lipoprotein, myristate; HET: MYR; 2.00A {Gallus gallus} Length = 198 | Back alignment and structure |
|---|
Score = 66.3 bits (162), Expect = 7e-13
Identities = 25/97 (25%), Positives = 42/97 (43%), Gaps = 3/97 (3%)
Query: 381 CENLPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESE-VNQYMEAGDIDG 439
E L E + +KF M S LTL E K + ++ V Q E D +
Sbjct: 8 VEELSATECHQWYKKF--MTECPSGQLTLYEFKQFFGLKNLSPSANKYVEQMFETFDFNK 65
Query: 440 NGNIDSIEFVNLMTDIYKLETPELLEKAFQYLDKNSD 476
+G ID +E+V ++ + K + + L F+ D + +
Sbjct: 66 DGYIDFMEYVAALSLVLKGKVDQKLRWYFKLYDVDGN 102
|
| >2r2i_A Guanylyl cyclase-activating protein 1; EF hand, GCAP, guanylate cyclase activating protein, GCAP1, GCAP-1, calcium, lipoprotein, myristate; HET: MYR; 2.00A {Gallus gallus} Length = 198 | Back alignment and structure |
|---|
Score = 63.6 bits (155), Expect = 6e-12
Identities = 33/168 (19%), Positives = 54/168 (32%), Gaps = 38/168 (22%)
Query: 317 VEYLPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNSST 376
VE L E +KF M +G L+ E +
Sbjct: 8 VEELSATECHQWYKKF--MTECPSGQLTLYEFKQFFGLKN-------------------- 45
Query: 377 LESLCENLPTKEKQKLMEK-FREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAG 435
+ K +E+ F D + + E A L+ + + ++ Y +
Sbjct: 46 --------LSPSANKYVEQMFETFDFNKDGYIDFMEYVAALSLVLKGKVDQKLRWYFKLY 97
Query: 436 DIDGNGNIDSIEFVNLMTDIYKLETP-------ELLEKAFQYLDKNSD 476
D+DGNG ID E +N++ I + E F +D N D
Sbjct: 98 DVDGNGCIDRGELLNIIKAIRAINRCNEAMTAEEFTNMVFDKIDINGD 145
|
| >2r2i_A Guanylyl cyclase-activating protein 1; EF hand, GCAP, guanylate cyclase activating protein, GCAP1, GCAP-1, calcium, lipoprotein, myristate; HET: MYR; 2.00A {Gallus gallus} Length = 198 | Back alignment and structure |
|---|
Score = 42.5 bits (100), Expect = 9e-05
Identities = 26/141 (18%), Positives = 53/141 (37%), Gaps = 24/141 (17%)
Query: 300 KQFRRMNKLKKLTIKVIVEYLPDEETQALKEKFIEM-----DTDKNGTLSYDELRAGLTK 354
K+F +LT+ ++ + K++E D +K+G + + E A L+
Sbjct: 21 KKFMTECPSGQLTLYEFKQFFGLKNLSPSANKYVEQMFETFDFNKDGYIDFMEYVAALSL 80
Query: 355 VGSMLTE---------FDVKH--------LMEAVKNSSTLESLCENLPTKEKQKLMEKFR 397
V + +DV L+ +K + E + +E ++ F
Sbjct: 81 VLKGKVDQKLRWYFKLYDVDGNGCIDRGELLNIIKAIRAINRCNEAMTAEEFTNMV--FD 138
Query: 398 EMDTDNSDTLTLSELKAGLAK 418
++D + L+L E G+ K
Sbjct: 139 KIDINGDGELSLEEFMEGVQK 159
|
| >3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298 | Back alignment and structure |
|---|
Score = 68.1 bits (167), Expect = 7e-13
Identities = 61/233 (26%), Positives = 93/233 (39%), Gaps = 32/233 (13%)
Query: 27 FGRMLGRGQFGVSY---LCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQ 83
F ++GRG FG Y L + A KS+ + + + E I S
Sbjct: 29 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSL-NRITDIGEVSQFLT-EGIIMKDFS-H 85
Query: 84 PNVVEFKST-YEDETAVHVVMELCEGGDL--FDRIIAKGYNSERDAATVLRAIVNAVNVC 140
PNV+ E + VV+ + GDL F R +E TV I + V
Sbjct: 86 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIR-------NETHNPTVKDLIGFGLQVA 138
Query: 141 H------SMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYI- 193
S +HRDL N D+ +KV DFG A + + Y +G +
Sbjct: 139 KGMKYLASKKFVHRDLAARN---CMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLP 195
Query: 194 ----APEVLR-RRYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQG 240
A E L+ +++ + D+WS GV+L+ L++ G PP+ +LQG
Sbjct: 196 VKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQG 248
|
| >1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A* Length = 298 | Back alignment and structure |
|---|
Score = 68.2 bits (167), Expect = 7e-13
Identities = 54/237 (22%), Positives = 97/237 (40%), Gaps = 33/237 (13%)
Query: 24 HYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQ 83
HY GR +G G FGV + T N+ A K ++ ++ +R E + L+G
Sbjct: 11 HYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRR-----SDAPQLRDEYRTYKLLAGC 65
Query: 84 PNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRA---IVNAVNVC 140
+ ++ +V++L G L D + + TV A ++ V
Sbjct: 66 TGIPNVYYFGQEGLHNVLVIDLL-GPSLED--LLDLCGRKFSVKTVAMAAKQMLARVQSI 122
Query: 141 HSMGVMHRDLKPENF--SFISRDDNALLKVTDFGSALLFEEGQV-----YRD---IVGSG 190
H +++RD+KP+NF + + ++ V DFG + + YR+ + G+
Sbjct: 123 HEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTA 182
Query: 191 FYIAPEVLRRRYGKEI----DIWSAGVILYILLSGVPPFW----AETKKGTYDAILQ 239
Y++ + G+E D+ + G + L G P W A T K Y+ I +
Sbjct: 183 RYMS---INTHLGREQSRRDDLEALGHVFMYFLRGSLP-WQGLKAATNKQKYERIGE 235
|
| >1juo_A Sorcin; calcium-binding proteins, penta-EF-hand, PEF, X-RAY, metal transport; 2.20A {Homo sapiens} SCOP: a.39.1.8 PDB: 2jc2_A Length = 198 | Back alignment and structure |
|---|
Score = 65.9 bits (161), Expect = 8e-13
Identities = 33/165 (20%), Positives = 56/165 (33%), Gaps = 18/165 (10%)
Query: 320 LPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLT--EFD---VKHLMEAV--K 372
P + L F ++G + DEL+ LT+ G F+ + ++ +
Sbjct: 27 FPGQTQDPLYGYF-AAVAGQDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRD 85
Query: 373 NSSTLESLCENLP-TKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQY 431
S T+ E + F DTD S T+ EL+ L +G L VN
Sbjct: 86 MSGTM-GFNEFKELWAVLNGWRQHFISFDTDRSGTVDPQELQKALTTMGFRLSPQAVNSI 144
Query: 432 MEAGDIDGNGNIDSIEFVNLMTDIYKLETPELLEKAFQYLDKNSD 476
+ NG I +++ + L +F+ D
Sbjct: 145 AK--RYSTNGKITFDDYIACCVKL------RALTDSFRRRDTAQQ 181
|
| >1juo_A Sorcin; calcium-binding proteins, penta-EF-hand, PEF, X-RAY, metal transport; 2.20A {Homo sapiens} SCOP: a.39.1.8 PDB: 2jc2_A Length = 198 | Back alignment and structure |
|---|
Score = 48.6 bits (116), Expect = 7e-07
Identities = 21/90 (23%), Positives = 37/90 (41%), Gaps = 10/90 (11%)
Query: 326 QALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNSSTLE-----SL 380
++ FI DTD++GT+ EL+ LT +G L+ V + + + + +
Sbjct: 103 NGWRQHFISFDTDRSGTVDPQELQKALTTMGFRLSPQAVNSIAKRYSTNGKITFDDYIAC 162
Query: 381 CENLPTKEKQKLMEKFREMDTDNSDTLTLS 410
C L + L + FR DT +
Sbjct: 163 CVKL-----RALTDSFRRRDTAQQGVVNFP 187
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 69.9 bits (170), Expect = 9e-13
Identities = 79/528 (14%), Positives = 163/528 (30%), Gaps = 134/528 (25%)
Query: 5 VSKNQRDPILGKAYEDVMLHYFFGRMLGRGQFGVSYLCTEN-STNRPYACKSIAKKPKMR 63
+SK + D I+ F +L + + V E N + I + +
Sbjct: 46 LSKEEIDHIIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQP 105
Query: 64 LAENDMIRREIQIRLYLSGQP----NVVEFKSTYEDETA-----------VH-------- 100
M + RLY Q NV + + A +
Sbjct: 106 SMMTRMYIEQRD-RLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKT 164
Query: 101 -VVMELCEGGDLFDRIIAKGY----NSERDAATVLRAIVNAVNVCHSMGVMHRDLK---- 151
V +++C + ++ K + + TVL + + + +
Sbjct: 165 WVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQK---LLYQIDPNWTSRSDHSS 221
Query: 152 --PENFSFISRDDNALLKVTDFGSALLFEEGQVYRDI----VGSGFYIAPEVL-RRRYGK 204
I + LLK + + LL V ++ + F ++ ++L R+ +
Sbjct: 222 NIKLRIHSIQAELRRLLKSKPYENCLL-----VLLNVQNAKAWNAFNLSCKILLTTRFKQ 276
Query: 205 EIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRML 264
D SA +I L T +L+ + + +DL R +L
Sbjct: 277 VTDFLSAATTTHISL--DHHSMTLTPDEVKSLLLK---------Y--LDCRPQDLPREVL 323
Query: 265 TKDPKRRIT--AAQVLEHPWLRESGEASDDTSVILRMKQFRRMN--KLKKLTIKVIVEYL 320
T +P RR++ A + + ++ +N KL I+ + L
Sbjct: 324 TTNP-RRLSIIAESIRDGL---------------ATWDNWKHVNCDKLTT-IIESSLNVL 366
Query: 321 PDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNSSTLESL 380
E + + +D L S+ + + L +
Sbjct: 367 EPAEYRKM----------------FDRL--------SVFPP-SAH-IPTIL-----LSLI 395
Query: 381 CENLPTKEKQKLMEKFRE---MDTDNSD-TLTL----SELKAGLAKLGSALEESEVNQYM 432
++ + ++ K + ++ + T+++ ELK L AL S V+ Y
Sbjct: 396 WFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENE-YALHRSIVDHYN 454
Query: 433 EAGDIDGNG----NIDSIEFVNLMTDIYKLETPELLEKA--FQ--YLD 472
D + +D + ++ + L+ E E+ F+ +LD
Sbjct: 455 IPKTFDSDDLIPPYLDQYFYSHIG---HHLKNIEHPERMTLFRMVFLD 499
|
| >3fs7_A Parvalbumin, thymic; calcium-binding protein, EF-hand, acetylation, calcium, metal binding protein; 1.95A {Gallus gallus} PDB: 2kqy_A Length = 109 | Back alignment and structure |
|---|
Score = 63.4 bits (155), Expect = 9e-13
Identities = 25/106 (23%), Positives = 47/106 (44%), Gaps = 9/106 (8%)
Query: 356 GSMLTEFDVKHLMEAVKNSSTLE-----SLCENLPTKEKQKLMEKFREMDTDNSDTLTLS 410
+L+ D++ + + + + + S L +K ++ + F +D D S +
Sbjct: 4 TDILSAKDIESALSSCQAADSFNYKSFFSTV-GLSSKTPDQIKKVFGILDQDKSGFIEEE 62
Query: 411 ELKAGLAKLGS---ALEESEVNQYMEAGDIDGNGNIDSIEFVNLMT 453
EL+ L S L +E ++ AGD DG+G I EF +L+
Sbjct: 63 ELQLFLKNFSSSARVLTSAETKAFLAAGDTDGDGKIGVEEFQSLVK 108
|
| >3fs7_A Parvalbumin, thymic; calcium-binding protein, EF-hand, acetylation, calcium, metal binding protein; 1.95A {Gallus gallus} PDB: 2kqy_A Length = 109 | Back alignment and structure |
|---|
Score = 40.7 bits (96), Expect = 1e-04
Identities = 8/58 (13%), Positives = 23/58 (39%), Gaps = 4/58 (6%)
Query: 419 LGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIYKLETPELLEKAFQYLDKNSD 476
+ L ++ + + + + F + + +TP+ ++K F LD++
Sbjct: 3 ITDILSAKDIESALSS--CQAADSFNYKSFFSTVGL--SSKTPDQIKKVFGILDQDKS 56
|
| >1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291 | Back alignment and structure |
|---|
Score = 67.3 bits (165), Expect = 1e-12
Identities = 48/238 (20%), Positives = 78/238 (32%), Gaps = 46/238 (19%)
Query: 28 GRMLGRGQFGVSY--LCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQI--------- 76
+ LG G FG + A K + K A D + E +
Sbjct: 22 DKELGSGNFGTVKKGYYQMKKVVKTVAVKIL-KNEANDPALKDELLAEANVMQQLDNPYI 80
Query: 77 -RLYLSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVN 135
R+ + E +S +VME+ E G L Y + I
Sbjct: 81 VRMI-----GICEAESWM-------LVMEMAELGPLNK------YLQQNRHVKDKNIIEL 122
Query: 136 AVNVCH------SMGVMHRDLKPENFSFISRDDNALLKVTDFG-SALLFEEGQVYRDIVG 188
V +HRDL N + K++DFG S L + Y+
Sbjct: 123 VHQVSMGMKYLEESNFVHRDLAARN---VLLVTQHYAKISDFGLSKALRADENYYKAQTH 179
Query: 189 SGFYI---APEVLR-RRYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQGE 241
+ + APE + ++ + D+WS GV+++ S G P+ + +GE
Sbjct: 180 GKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGE 237
|
| >3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325 | Back alignment and structure |
|---|
Score = 67.7 bits (166), Expect = 1e-12
Identities = 53/231 (22%), Positives = 88/231 (38%), Gaps = 28/231 (12%)
Query: 27 FGRMLGRGQFGVSY---LCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQ 83
+++G G G L + P A K++ K D + E I
Sbjct: 53 IEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKAL-KAGYTERQRRDFL-SEASIMGQFD-H 109
Query: 84 PNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVN-AVNVCH- 141
PN++ + +V E E G L + D + +V V
Sbjct: 110 PNIIRLEGVVTRGRLAMIVTEYMENGSLDT------FLRTHDGQFTIMQLVGMLRGVGAG 163
Query: 142 -----SMGVMHRDLKPENFSFISRDDNALLKVTDFG-SALLFEEGQVYRDIVGSGFYI-- 193
+G +HRDL N + D N + KV+DFG S +L ++ G I
Sbjct: 164 MRYLSDLGYVHRDLAARN---VLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRW 220
Query: 194 -APEVLR-RRYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQGE 241
APE + R + D+WS GV+++ +L+ G P+W T + ++ +G
Sbjct: 221 TAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEGY 271
|
| >2pmy_A RAS and EF-hand domain-containing protein; rasef, calcium-binding domain, structural genomics, structural genomics consortium, SGC; 2.30A {Homo sapiens} Length = 91 | Back alignment and structure |
|---|
Score = 62.8 bits (153), Expect = 1e-12
Identities = 16/77 (20%), Positives = 27/77 (35%), Gaps = 2/77 (2%)
Query: 376 TLESLCENLPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAG 435
L + +E +L F D + S L E +A +L + ++ +
Sbjct: 13 NLYFQGADGDGEELARLRSVFAACDANRSGRLEREEFRALCTELR--VRPADAEAVFQRL 70
Query: 436 DIDGNGNIDSIEFVNLM 452
D D +G I EF
Sbjct: 71 DADRDGAITFQEFARGF 87
|
| >2pmy_A RAS and EF-hand domain-containing protein; rasef, calcium-binding domain, structural genomics, structural genomics consortium, SGC; 2.30A {Homo sapiens} Length = 91 | Back alignment and structure |
|---|
Score = 53.5 bits (129), Expect = 2e-09
Identities = 12/70 (17%), Positives = 27/70 (38%), Gaps = 2/70 (2%)
Query: 302 FRRMNKLKKLTIKVIVEYLPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTE 361
+ + + EE L+ F D +++G L +E RA T++ +
Sbjct: 3 HHHHHSSGRENLYFQGADGDGEELARLRSVFAACDANRSGRLEREEFRALCTELR--VRP 60
Query: 362 FDVKHLMEAV 371
D + + + +
Sbjct: 61 ADAEAVFQRL 70
|
| >3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327 | Back alignment and structure |
|---|
Score = 67.4 bits (165), Expect = 1e-12
Identities = 50/231 (21%), Positives = 86/231 (37%), Gaps = 29/231 (12%)
Query: 27 FGRMLGRGQFGV----SYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSG 82
++LG G FG ++ P A K + ++ A +++ E + +
Sbjct: 19 KIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKEL-REATSPKANKEIL-DEAYVMASVD- 75
Query: 83 QPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVN-AVNVC- 140
P+V T V ++ +L G L D Y E + ++N V +
Sbjct: 76 NPHVCRLLGICLTST-VQLITQLMPFGCLLD------YVREHKDNIGSQYLLNWCVQIAK 128
Query: 141 -----HSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYI-- 193
++HRDL N + +K+TDFG A L + G I
Sbjct: 129 GMNYLEDRRLVHRDLAARN---VLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 185
Query: 194 -APEVLR-RRYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQGE 241
A E + R Y + D+WS GV ++ L++ G P+ + +GE
Sbjct: 186 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE 236
|
| >2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613 | Back alignment and structure |
|---|
Score = 68.8 bits (168), Expect = 2e-12
Identities = 53/226 (23%), Positives = 83/226 (36%), Gaps = 28/226 (12%)
Query: 31 LGRGQFGVSY---LCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVV 87
LG G FG A K + K+ + +M+R E QI L P +V
Sbjct: 344 LGCGNFGSVRQGVYRMRKKQ-IDVAIKVL-KQGTEKADTEEMMR-EAQIMHQLD-NPYIV 399
Query: 88 EFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCH------ 141
+ E + +VME+ GG L + +R+ V V
Sbjct: 400 RLIGVCQAEA-LMLVMEMAGGGPLHKFL-----VGKREEIPVSNVAELLHQVSMGMKYLE 453
Query: 142 SMGVMHRDLKPENFSFISRDDNALLKVTDFG-SALLFEEGQVYRDIVGSGFYI---APEV 197
+HR+L N + + K++DFG S L + Y + + APE
Sbjct: 454 EKNFVHRNLAARN---VLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPEC 510
Query: 198 LR-RRYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQGE 241
+ R++ D+WS GV ++ LS G P+ I QG+
Sbjct: 511 INFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGK 556
|
| >1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278 | Back alignment and structure |
|---|
Score = 66.5 bits (163), Expect = 2e-12
Identities = 48/231 (20%), Positives = 86/231 (37%), Gaps = 42/231 (18%)
Query: 27 FGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNV 86
+ +G+G+FG L A K I K + E + L N+
Sbjct: 25 LLQTIGKGEFGDVMLGDYR--GNKVAVKCI-KNDAT---AQAFL-AEASVMTQLR-HSNL 76
Query: 87 VEFKSTY----EDETAVHVVMELCEGGDLFDRIIAKGY--NSERDAATVLRAIVNAVNVC 140
V+ E++ +++V E G L D Y + R + +++VC
Sbjct: 77 VQL---LGVIVEEKGGLYIVTEYMAKGSLVD------YLRSRGRSVLGGDCLLKFSLDVC 127
Query: 141 H------SMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYI- 193
+HRDL N + ++ + KV+DFG + +
Sbjct: 128 EAMEYLEGNNFVHRDLAARN---VLVSEDNVAKVSDFGLT-----KEASSTQDTGKLPVK 179
Query: 194 --APEVLR-RRYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQG 240
APE LR +++ + D+WS G++L+ + S G P+ K + +G
Sbjct: 180 WTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKG 230
|
| >1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450 | Back alignment and structure |
|---|
Score = 67.8 bits (166), Expect = 2e-12
Identities = 48/231 (20%), Positives = 86/231 (37%), Gaps = 42/231 (18%)
Query: 27 FGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNV 86
+ +G+G+FG L A K I K + E + L N+
Sbjct: 197 LLQTIGKGEFGDVMLGDYR--GNKVAVKCI----KNDATAQAFLA-EASVMTQLR-HSNL 248
Query: 87 VEFKSTY----EDETAVHVVMELCEGGDLFDRIIAKGY--NSERDAATVLRAIVNAVNVC 140
V+ E++ +++V E G L D Y + R + +++VC
Sbjct: 249 VQL---LGVIVEEKGGLYIVTEYMAKGSLVD------YLRSRGRSVLGGDCLLKFSLDVC 299
Query: 141 ------HSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYI- 193
+HRDL N + ++ + KV+DFG + +
Sbjct: 300 EAMEYLEGNNFVHRDLAARN---VLVSEDNVAKVSDFGLT-----KEASSTQDTGKLPVK 351
Query: 194 --APEVLR-RRYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQG 240
APE LR +++ + D+WS G++L+ + S G P+ K + +G
Sbjct: 352 WTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKG 402
|
| >1nya_A Calerythrin; EF-hand, metal binding protein; NMR {Saccharopolyspora erythraea} SCOP: a.39.1.5 Length = 176 | Back alignment and structure |
|---|
Score = 64.4 bits (157), Expect = 2e-12
Identities = 28/167 (16%), Positives = 52/167 (31%), Gaps = 31/167 (18%)
Query: 322 DEETQALKEKFIEMDTDKNGTLSYDELRAGLTKV----GSMLTEFDVKHLMEAVKNSSTL 377
+ LK++F D D NG L + + G +V+ L A
Sbjct: 3 AIASDRLKKRFDRWDFDGNGALERADFEKEAQHIAEAFGKDAGAAEVQTLKNAFGGLFD- 61
Query: 378 ESLCENLPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYME---- 433
+E + +LT + L E+ N+ +
Sbjct: 62 ----------------YLAKEAGVGSDGSLTEEQFIRVTENLIFEQGEASFNRVLGPVVK 105
Query: 434 ----AGDIDGNGNIDSIEFVNLMTDIYKLETPELLEKAFQYLDKNSD 476
D + +G I++ EF +T + + +AF +D N +
Sbjct: 106 GIVGMCDKNADGQINADEFAAWLTALG--MSKAEAAEAFNQVDTNGN 150
|
| >1nya_A Calerythrin; EF-hand, metal binding protein; NMR {Saccharopolyspora erythraea} SCOP: a.39.1.5 Length = 176 | Back alignment and structure |
|---|
Score = 63.2 bits (154), Expect = 5e-12
Identities = 25/152 (16%), Positives = 44/152 (28%), Gaps = 31/152 (20%)
Query: 322 DEETQALKEKFI--------EMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKN 373
E Q LK F E +G+L+ ++ + E
Sbjct: 46 AAEVQTLKNAFGGLFDYLAKEAGVGSDGSLTEEQFIRVTENLIFEQGE------------ 93
Query: 374 SSTLESLCENLPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYME 433
+ + D + + E A L LG + ++E +
Sbjct: 94 --------ASFNRVLGPVVKGIVGMCDKNADGQINADEFAAWLTALG--MSKAEAAEAFN 143
Query: 434 AGDIDGNGNIDSIEFVNLMTDIYKLET-PELL 464
D +GNG + E + + D + ELL
Sbjct: 144 QVDTNGNGELSLDELLTAVRDFHFGRLDVELL 175
|
| >2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535 | Back alignment and structure |
|---|
Score = 67.6 bits (165), Expect = 3e-12
Identities = 56/227 (24%), Positives = 94/227 (41%), Gaps = 30/227 (13%)
Query: 27 FGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNV 86
LG+G FG ++ T N A K++ K M + + +E Q+ L +
Sbjct: 271 LEVKLGQGCFGEVWMGTWN-GTTRVAIKTL-KPGTM--SPEAFL-QEAQVMKKLR-HEKL 324
Query: 87 VEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGY--NSERDAATVLRAIVNAVNVC---- 140
V+ + +E +++V E G L D + + + + A +
Sbjct: 325 VQLYAVVSEE-PIYIVTEYMSKGSLLD------FLKGETGKYLRLPQLVDMAAQIASGMA 377
Query: 141 --HSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYI---AP 195
M +HRDL+ N I +N + KV DFG A L E+ + Y G+ F I AP
Sbjct: 378 YVERMNYVHRDLRAAN---ILVGENLVCKVADFGLARLIEDNE-YTARQGAKFPIKWTAP 433
Query: 196 EVLR-RRYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQG 240
E R+ + D+WS G++L L + G P+ + D + +G
Sbjct: 434 EAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG 480
|
| >2ehb_A Calcineurin B-like protein 4; protein complex, Ca(II) IONS bound to SOS3 (EF-hands 1 and 4 FISL motif; 2.10A {Arabidopsis thaliana} PDB: 1v1g_A 1v1f_A Length = 207 | Back alignment and structure |
|---|
Score = 64.8 bits (158), Expect = 3e-12
Identities = 34/178 (19%), Positives = 64/178 (35%), Gaps = 26/178 (14%)
Query: 298 RMKQFRRMNKLKKLTIKVIVE--YLPDEETQALKEKFIEMDTD--KNGTLSYDELRAGLT 353
+ K+ M +++ EE +AL E F ++ + +G + +E + L
Sbjct: 7 KKKKKNAMRPPGYEDPELLASVTPFTVEEVEALYELFKKLSSSIIDDGLIHKEEFQLALF 66
Query: 354 KVGSMLTEFDVKHLMEA--VKNSST---------LESLCENLPTKEKQKLMEKFREMDTD 402
+ + F + + VK + L + P EK + F+ D
Sbjct: 67 RNRNRRNLF-ADRIFDVFDVKRNGVIEFGEFVRSLGVFHPSAPVHEK--VKFAFKLYDLR 123
Query: 403 NSDTLTLSELKAGLAKL--GSALEESE------VNQYMEAGDIDGNGNIDSIEFVNLM 452
+ + ELK + L S L SE V++ D +G ID E+ + +
Sbjct: 124 QTGFIEREELKEMVVALLHESELVLSEDMIEVMVDKAFVQADRKNDGKIDIDEWKDFV 181
|
| >2ehb_A Calcineurin B-like protein 4; protein complex, Ca(II) IONS bound to SOS3 (EF-hands 1 and 4 FISL motif; 2.10A {Arabidopsis thaliana} PDB: 1v1g_A 1v1f_A Length = 207 | Back alignment and structure |
|---|
Score = 58.2 bits (141), Expect = 5e-10
Identities = 18/105 (17%), Positives = 39/105 (37%), Gaps = 6/105 (5%)
Query: 377 LESLCE--NLPTKEKQKLMEKFREMDTD--NSDTLTLSELKAGLAKLGSALEESEVNQYM 432
E L +E + L E F+++ + + + E + L + + ++
Sbjct: 22 PELLASVTPFTVEEVEALYELFKKLSSSIIDDGLIHKEEFQLALFRNRNR-RNLFADRIF 80
Query: 433 EAGDIDGNGNIDSIEFVNLMTDIYKLETPEL-LEKAFQYLDKNSD 476
+ D+ NG I+ EFV + + ++ AF+ D
Sbjct: 81 DVFDVKRNGVIEFGEFVRSLGVFHPSAPVHEKVKFAFKLYDLRQT 125
|
| >3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281 | Back alignment and structure |
|---|
Score = 65.7 bits (161), Expect = 3e-12
Identities = 51/239 (21%), Positives = 92/239 (38%), Gaps = 47/239 (19%)
Query: 27 FGRMLGRGQFGVSY---LCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQI------- 76
R+LG G FG Y A K+ KK + + E I
Sbjct: 16 LNRILGEGFFGEVYEGVYTNHKGEKINVAVKTC-KKDCTLDNKEKFM-SEAVIMKNLDHP 73
Query: 77 ---RLYLSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAI 133
+L ++E + T+ ++MEL G+L + +++ VL +
Sbjct: 74 HIVKLI-----GIIEEEPTW-------IIMELYPYGELGHYL-----ERNKNSLKVLTLV 116
Query: 134 VNAVNVCH------SMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIV 187
+ ++ +C S+ +HRD+ N I +K+ DFG + E+ Y+
Sbjct: 117 LYSLQICKAMAYLESINCVHRDIAVRN---ILVASPECVKLGDFGLSRYIEDEDYYKA-S 172
Query: 188 GSGFYI---APEVLR-RRYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQGE 241
+ I +PE + RR+ D+W V ++ +LS G PF+ K + +G+
Sbjct: 173 VTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGD 231
|
| >1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452 | Back alignment and structure |
|---|
Score = 67.1 bits (164), Expect = 4e-12
Identities = 65/250 (26%), Positives = 104/250 (41%), Gaps = 28/250 (11%)
Query: 3 CSVSKNQRDPILGKAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKM 62
C SK Q + A+E LG+G FG ++ T N A K++ K M
Sbjct: 164 CPTSKPQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWN-GTTRVAIKTL-KPGTM 221
Query: 63 RLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNS 122
+ + +E Q+ L +V+ + +E +++V E G L D +
Sbjct: 222 --SPEAFL-QEAQVMKKLR-HEKLVQLYAVVSEE-PIYIVTEYMSKGSLLDFLK-----G 271
Query: 123 ERDAATVLRAIVN-AVNVC------HSMGVMHRDLKPENFSFISRDDNALLKVTDFGSAL 175
E L +V+ A + M +HRDL+ N I +N + KV DFG A
Sbjct: 272 ETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAAN---ILVGENLVCKVADFGLAR 328
Query: 176 LFEEGQVYRDIVGSGFYI---APEVLR-RRYGKEIDIWSAGVILYILLS-GVPPFWAETK 230
L E+ + Y G+ F I APE R+ + D+WS G++L L + G P+
Sbjct: 329 LIEDNE-YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN 387
Query: 231 KGTYDAILQG 240
+ D + +G
Sbjct: 388 REVLDQVERG 397
|
| >2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A* Length = 330 | Back alignment and structure |
|---|
Score = 66.2 bits (162), Expect = 4e-12
Identities = 58/247 (23%), Positives = 87/247 (35%), Gaps = 53/247 (21%)
Query: 24 HYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQ 83
++ G+ +G G FG L TN A K K + + E + L
Sbjct: 10 NFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMK-----SRAPQLHLEYRFYKQLGSG 64
Query: 84 PNVVEFKSTYEDETAVHVVMELCEGG----DLFDRIIAKGYNSER-DAATVLRA---IVN 135
+ + +V+EL G DLFD TVL +++
Sbjct: 65 DGIPQVYYFGPCGKYNAMVLELL--GPSLEDLFD------LCDRTFSLKTVLMIAIQLIS 116
Query: 136 AVNVCHSMGVMHRDLKPENFSFISRDDNALLK---VTDFGSALLFEEGQVYRDIVGSGFY 192
+ HS +++RD+KPENF I R N + + DF A + Y D + +
Sbjct: 117 RMEYVHSKNLIYRDVKPENF-LIGRPGNKTQQVIHIIDFALA------KEYIDP-ETKKH 168
Query: 193 IAPEVLRR-----RY-------GKEI----DIWSAGVILYILLSGVPPFW----AETKKG 232
I + RY GKE D+ + G + L G P W A+T K
Sbjct: 169 IPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLP-WQGLKADTLKE 227
Query: 233 TYDAILQ 239
Y I
Sbjct: 228 RYQKIGD 234
|
| >3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325 | Back alignment and structure |
|---|
Score = 65.8 bits (161), Expect = 5e-12
Identities = 45/231 (19%), Positives = 84/231 (36%), Gaps = 29/231 (12%)
Query: 27 FGRMLGRGQFGV----SYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSG 82
++LG G FG ++ S P K I + R + + + L
Sbjct: 17 KLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVI-EDKSGRQSFQAVTD-HMLAIGSLD- 73
Query: 83 QPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVN-AVNVCH 141
++V + + +V + G L D + + A + ++N V +
Sbjct: 74 HAHIVRLLGLCPGSS-LQLVTQYLPLGSLLD------HVRQHRGALGPQLLLNWGVQIAK 126
Query: 142 ------SMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYI-- 193
G++HR+L N + + ++V DFG A L + I
Sbjct: 127 GMYYLEEHGMVHRNLAARN---VLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKW 183
Query: 194 -APEVLR-RRYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQGE 241
A E + +Y + D+WS GV ++ L++ G P+ D + +GE
Sbjct: 184 MALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLEKGE 234
|
| >2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373 | Back alignment and structure |
|---|
Score = 65.8 bits (161), Expect = 6e-12
Identities = 55/234 (23%), Positives = 95/234 (40%), Gaps = 34/234 (14%)
Query: 27 FGRMLGRGQFGVSY---LCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQ 83
+++G G+FG L + A K++ K D + E I GQ
Sbjct: 49 IDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTL-KVGYTEKQRRDFL-GEASIM----GQ 102
Query: 84 ---PNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVN-AVNV 139
PN++ + V +V E E G L + + DA + +V +
Sbjct: 103 FDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS------FLRKHDAQFTVIQLVGMLRGI 156
Query: 140 CH------SMGVMHRDLKPENFSFISRDDNALLKVTDFG-SALLFEEGQVYRDIVGSGFY 192
MG +HRDL N I + N + KV+DFG +L ++ + G
Sbjct: 157 ASGMKYLSDMGYVHRDLAARN---ILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIP 213
Query: 193 I---APEVLR-RRYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQGE 241
I +PE + R++ D+WS G++L+ ++S G P+W + + A+ +G
Sbjct: 214 IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGY 267
|
| >5pal_A Parvalbumin; calcium-binding protein; 1.54A {Triakis semifasciata} SCOP: a.39.1.4 Length = 109 | Back alignment and structure |
|---|
Score = 61.4 bits (150), Expect = 6e-12
Identities = 27/107 (25%), Positives = 45/107 (42%), Gaps = 9/107 (8%)
Query: 355 VGSMLTEFDVKHLMEAVKNSSTLE-----SLCENLPTKEKQKLMEKFREMDTDNSDTLTL 409
+ +L D+ + A K+ T + L K ++ E F +D D S +
Sbjct: 2 MTKVLKADDINKAISAFKDPGTFDYKRFFHLVGLK-GKTDAQVKEVFEILDKDQSGFIEE 60
Query: 410 SELK---AGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMT 453
ELK G + G L ++E + AGD D +G I + EF ++
Sbjct: 61 EELKGVLKGFSAHGRDLNDTETKALLAAGDSDHDGKIGADEFAKMVA 107
|
| >5pal_A Parvalbumin; calcium-binding protein; 1.54A {Triakis semifasciata} SCOP: a.39.1.4 Length = 109 | Back alignment and structure |
|---|
Score = 46.0 bits (110), Expect = 1e-06
Identities = 12/58 (20%), Positives = 26/58 (44%), Gaps = 4/58 (6%)
Query: 419 LGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIYKLETPELLEKAFQYLDKNSD 476
+ L+ ++N+ + G D F +L+ K +T +++ F+ LDK+
Sbjct: 2 MTKVLKADDINKAIS--AFKDPGTFDYKRFFHLVGL--KGKTDAQVKEVFEILDKDQS 55
|
| >3dd4_A KV channel-interacting protein 4; EF-hands protein, ION transport, ionic channel, membrane, PO potassium channel, potassium transport, transport; 3.00A {Mus musculus} PDB: 2e6w_A Length = 229 | Back alignment and structure |
|---|
Score = 64.1 bits (156), Expect = 6e-12
Identities = 28/186 (15%), Positives = 58/186 (31%), Gaps = 23/186 (12%)
Query: 288 EASDDTSVILRMKQFRRMNKLKKLTIKVIVEYLPDEETQALKEKFIEMDTDKNGTLSYDE 347
EA + SV ++ ++ + L + +E Q L F + +G ++ +
Sbjct: 29 EAGLEDSVEDELEMATVRHRPEALELLEAQSKFTKKELQILYRGF--KNECPSGVVNEET 86
Query: 348 LRAGLTKVGSMLTE-FDVKHLMEAVKNSST--------LESLCENLPTKEKQKLMEKFRE 398
+ ++ L A ++ L L ++KL F
Sbjct: 87 FKEIYSQFFPQGDSTTYAHFLFNAFDTDHNGAVSFEDFIKGLSILLRGTVQEKLNWAFNL 146
Query: 399 MDTDNSDTLTLSEL----KAGLAKLGSALEESE--------VNQYMEAGDIDGNGNIDSI 446
D + +T E+ KA +G V + + D + +G +
Sbjct: 147 YDINKDGYITKEEMLDIMKAIYDMMGKCTYPVLKEDAPRQHVETFFQKMDKNKDGVVTID 206
Query: 447 EFVNLM 452
EF+
Sbjct: 207 EFIESC 212
|
| >3dd4_A KV channel-interacting protein 4; EF-hands protein, ION transport, ionic channel, membrane, PO potassium channel, potassium transport, transport; 3.00A {Mus musculus} PDB: 2e6w_A Length = 229 | Back alignment and structure |
|---|
Score = 55.7 bits (134), Expect = 5e-09
Identities = 23/103 (22%), Positives = 38/103 (36%), Gaps = 5/103 (4%)
Query: 377 LESLCE--NLPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYM-E 433
LE L KE Q L F + S + K ++ + + ++
Sbjct: 52 LELLEAQSKFTKKELQILYRGF--KNECPSGVVNEETFKEIYSQFFPQGDSTTYAHFLFN 109
Query: 434 AGDIDGNGNIDSIEFVNLMTDIYKLETPELLEKAFQYLDKNSD 476
A D D NG + +F+ ++ + + E L AF D N D
Sbjct: 110 AFDTDHNGAVSFEDFIKGLSILLRGTVQEKLNWAFNLYDINKD 152
|
| >3dd4_A KV channel-interacting protein 4; EF-hands protein, ION transport, ionic channel, membrane, PO potassium channel, potassium transport, transport; 3.00A {Mus musculus} PDB: 2e6w_A Length = 229 | Back alignment and structure |
|---|
Score = 40.3 bits (94), Expect = 7e-04
Identities = 19/106 (17%), Positives = 36/106 (33%), Gaps = 16/106 (15%)
Query: 313 IKVIVEYLPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVK 372
IK + L + L F D +K+G ++ +E+ + + M+ + L E
Sbjct: 125 IKGLSILLRGTVQEKLNWAFNLYDINKDGYITKEEMLDIMKAIYDMMGKCTYPVLKE--- 181
Query: 373 NSSTLESLCENLPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAK 418
E F++MD + +T+ E K
Sbjct: 182 --DAPRQHVETF-----------FQKMDKNKDGVVTIDEFIESCQK 214
|
| >2kn2_A Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco MKP1, metal binding Pro; NMR {Glycine max} Length = 92 | Back alignment and structure |
|---|
Score = 60.7 bits (148), Expect = 6e-12
Identities = 25/89 (28%), Positives = 46/89 (51%), Gaps = 3/89 (3%)
Query: 383 NLPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGN 442
++ T +++L E F+ D D + ++ SEL+ + LG L + EV Q ++ D+DG+G
Sbjct: 2 HMDTDAEEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQ 61
Query: 443 IDSIEFVNLMTDIYKL---ETPELLEKAF 468
++ EFV +M + L + F
Sbjct: 62 VNYEEFVKMMMTVRGGGGGNGWSRLRRKF 90
|
| >2kn2_A Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco MKP1, metal binding Pro; NMR {Glycine max} Length = 92 | Back alignment and structure |
|---|
Score = 38.0 bits (89), Expect = 7e-04
Identities = 16/53 (30%), Positives = 30/53 (56%)
Query: 319 YLPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAV 371
++ + + LKE F D D+NG +S ELR + +G LT+ +V+ +++
Sbjct: 2 HMDTDAEEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEA 54
|
| >1avs_A Troponin C; muscle contraction, calcium-activated, E-F hand calcium-binding protein; 1.75A {Gallus gallus} SCOP: a.39.1.5 PDB: 1blq_A 1skt_A 1tnp_A 1tnq_A 1zac_A 1smg_A 1npq_A 1trf_A Length = 90 | Back alignment and structure |
|---|
Score = 60.7 bits (148), Expect = 6e-12
Identities = 19/72 (26%), Positives = 31/72 (43%)
Query: 382 ENLPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNG 441
L + + F D D ++ EL + LG + E++ +E D DG+G
Sbjct: 12 AFLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSG 71
Query: 442 NIDSIEFVNLMT 453
ID EF+ +M
Sbjct: 72 TIDFEEFLVMMV 83
|
| >1avs_A Troponin C; muscle contraction, calcium-activated, E-F hand calcium-binding protein; 1.75A {Gallus gallus} SCOP: a.39.1.5 PDB: 1blq_A 1skt_A 1tnp_A 1tnq_A 1zac_A 1smg_A 1npq_A 1trf_A Length = 90 | Back alignment and structure |
|---|
Score = 43.8 bits (104), Expect = 5e-06
Identities = 14/54 (25%), Positives = 24/54 (44%)
Query: 318 EYLPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAV 371
+L +E K F D D G +S EL + +G T+ ++ ++E V
Sbjct: 12 AFLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEV 65
|
| >2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens} Length = 345 | Back alignment and structure |
|---|
Score = 65.5 bits (160), Expect = 8e-12
Identities = 33/168 (19%), Positives = 62/168 (36%), Gaps = 22/168 (13%)
Query: 24 HYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPK------------MRLAENDMIR 71
+ G+ +G G FG+ YL + A + + + R+A+ D I+
Sbjct: 38 QWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIK 97
Query: 72 REIQIRLYLS-GQPNVVEFKSTYEDETAVHV-VMELCEGGDLFDRIIAKGYNSERDAATV 129
+ I+ + G P T + VME G DL G + TV
Sbjct: 98 KWIERKQLDYLGIPLFYGSGLTEFKGRSYRFMVMERL-GIDLQKISGQNGTFKKS---TV 153
Query: 130 LRA---IVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSA 174
L+ +++ + H +H D+K N + + + + D+G +
Sbjct: 154 LQLGIRMLDVLEYIHENEYVHGDIKAANL-LLGYKNPDQVYLADYGLS 200
|
| >1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281 | Back alignment and structure |
|---|
Score = 64.6 bits (158), Expect = 8e-12
Identities = 53/230 (23%), Positives = 87/230 (37%), Gaps = 29/230 (12%)
Query: 27 FGRMLGRGQFGVSY---LCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQ 83
GR +G GQFG + + + A K+ K + +E
Sbjct: 19 LGRCIGEGQFGDVHQGIYMSPENPALAVAIKTC-KNCTSDSVREKFL-QEALTMRQFD-H 75
Query: 84 PNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVN-AVNVCH- 141
P++V+ + V ++MELC G+L + R + L +++ A +
Sbjct: 76 PHIVKLIGVITENP-VWIIMELCTLGELRS------FLQVRKYSLDLASLILYAYQLSTA 128
Query: 142 -----SMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYI--- 193
S +HRD+ N + N +K+ DFG + E+ Y+ I
Sbjct: 129 LAYLESKRFVHRDIAARN---VLVSSNDCVKLGDFGLSRYMEDSTYYKA-SKGKLPIKWM 184
Query: 194 APEVLR-RRYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQGE 241
APE + RR+ D+W GV ++ +L GV PF I GE
Sbjct: 185 APESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE 234
|
| >1k94_A Grancalcin; penta-EF-hand protein, calcium binding protein, metal binding protein; 1.70A {Homo sapiens} SCOP: a.39.1.8 PDB: 1k95_A 1f4q_A 1f4o_A Length = 165 | Back alignment and structure |
|---|
Score = 62.4 bits (152), Expect = 9e-12
Identities = 28/162 (17%), Positives = 55/162 (33%), Gaps = 26/162 (16%)
Query: 327 ALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLT--EFD---VKHLMEAV--KNSSTLE- 378
++ F ++G + +EL+ LT+ G T F + ++ + ++ +
Sbjct: 1 SVYTYF-SAVAGQDGEVDAEELQRCLTQSGINGTYSPFSLETCRIMIAMLDRDHTGKMGF 59
Query: 379 ----SLCENLPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEA 434
L L E F +D D S T+ EL+ + +G L + ++
Sbjct: 60 NAFKELWAAL-----NAWKENFMTVDQDGSGTVEHHELRQAIGLMGYRLSPQTLTTIVK- 113
Query: 435 GDIDGNGNIDSIEFVNLMTDIYKLETPELLEKAFQYLDKNSD 476
NG I ++V + L F+ D
Sbjct: 114 -RYSKNGRIFFDDYVACCVKL------RALTDFFRKRDHLQQ 148
|
| >1k94_A Grancalcin; penta-EF-hand protein, calcium binding protein, metal binding protein; 1.70A {Homo sapiens} SCOP: a.39.1.8 PDB: 1k95_A 1f4q_A 1f4o_A Length = 165 | Back alignment and structure |
|---|
Score = 49.3 bits (118), Expect = 3e-07
Identities = 19/91 (20%), Positives = 38/91 (41%), Gaps = 10/91 (10%)
Query: 326 QALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNSSTLE-----SL 380
A KE F+ +D D +GT+ + ELR + +G L+ + +++ + + +
Sbjct: 70 NAWKENFMTVDQDGSGTVEHHELRQAIGLMGYRLSPQTLTTIVKRYSKNGRIFFDDYVAC 129
Query: 381 CENLPTKEKQKLMEKFREMDTDNSDTLTLSE 411
C L + L + FR+ D +
Sbjct: 130 CVKL-----RALTDFFRKRDHLQQGSANFIY 155
|
| >2jjz_A Ionized calcium-binding adapter molecule 2; EF-hand, actin crosslinking, ionized calciu binding adapter molecule 2, metal-binding protein; 2.15A {Homo sapiens} PDB: 2jjz_B 2vtg_A Length = 150 | Back alignment and structure |
|---|
Score = 61.8 bits (150), Expect = 9e-12
Identities = 18/72 (25%), Positives = 30/72 (41%)
Query: 382 ENLPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNG 441
E ++ EK+ E D +N + L LK + KLG E+ + + +
Sbjct: 42 EENLPEKLTAFKEKYMEFDLNNEGEIDLMSLKRMMEKLGVPKTHLEMKKMISEVTGGVSD 101
Query: 442 NIDSIEFVNLMT 453
I +FVN+M
Sbjct: 102 TISYRDFVNMML 113
|
| >2jjz_A Ionized calcium-binding adapter molecule 2; EF-hand, actin crosslinking, ionized calciu binding adapter molecule 2, metal-binding protein; 2.15A {Homo sapiens} PDB: 2jjz_B 2vtg_A Length = 150 | Back alignment and structure |
|---|
Score = 51.8 bits (124), Expect = 3e-08
Identities = 24/116 (20%), Positives = 53/116 (45%), Gaps = 6/116 (5%)
Query: 296 ILRMKQFRRMNKLKKLTI---KVIVEYLPDEETQALKEKFIEMDTDKNGTLSYDELRAGL 352
IL+ +Q RR+ ++ + + K E E+ A KEK++E D + G + L+ +
Sbjct: 17 ILKARQERRLAEINREFLCDQKYSDEENLPEKLTAFKEKYMEFDLNNEGEIDLMSLKRMM 76
Query: 353 TKVGSMLTEFDVKHLMEAV-KNSSTLESLCE--NLPTKEKQKLMEKFREMDTDNSD 405
K+G T ++K ++ V S S + N+ ++ +++ + ++
Sbjct: 77 EKLGVPKTHLEMKKMISEVTGGVSDTISYRDFVNMMLGKRSAVLKLVMMFEGKANE 132
|
| >1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287 | Back alignment and structure |
|---|
Score = 64.6 bits (158), Expect = 1e-11
Identities = 54/225 (24%), Positives = 85/225 (37%), Gaps = 26/225 (11%)
Query: 31 LGRGQFGVSY--LCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVE 88
LG G FG + A K + K+ + +M+R E QI L P +V
Sbjct: 18 LGCGNFGSVRQGVYRMRKKQIDVAIKVL-KQGTEKADTEEMMR-EAQIMHQLD-NPYIVR 74
Query: 89 FKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCH------S 142
+ E + +VME+ GG L ++ +R+ V V
Sbjct: 75 LIGVCQAEA-LMLVMEMAGGGPLHKFLV-----GKREEIPVSNVAELLHQVSMGMKYLEE 128
Query: 143 MGVMHRDLKPENFSFISRDDNALLKVTDFG-SALLFEEGQVYRDIVGSGFYI---APEVL 198
+HRDL N + + K++DFG S L + Y + + APE +
Sbjct: 129 KNFVHRDLAARN---VLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECI 185
Query: 199 R-RRYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQGE 241
R++ D+WS GV ++ LS G P+ I QG+
Sbjct: 186 NFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGK 230
|
| >1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333 | Back alignment and structure |
|---|
Score = 64.7 bits (158), Expect = 1e-11
Identities = 51/232 (21%), Positives = 92/232 (39%), Gaps = 29/232 (12%)
Query: 27 FGRMLGRGQFGV----SYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSG 82
+++G G+FG + P A K++ K D + E I S
Sbjct: 48 RQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTL-KAGYTEKQRVDFLG-EAGIMGQFS- 104
Query: 83 QPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVN-AVNVCH 141
N++ + + ++ E E G L + E+D + +V +
Sbjct: 105 HHNIIRLEGVISKYKPMMIITEYMENGALDK------FLREKDGEFSVLQLVGMLRGIAA 158
Query: 142 ------SMGVMHRDLKPENFSFISRDDNALLKVTDFG-SALLFEEGQVYRDIVGSGFYI- 193
+M +HRDL N I + N + KV+DFG S +L ++ + G I
Sbjct: 159 GMKYLANMNYVHRDLAARN---ILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIR 215
Query: 194 --APEVLR-RRYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQGE 241
APE + R++ D+WS G++++ +++ G P+W + AI G
Sbjct: 216 WTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGF 267
|
| >1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291 | Back alignment and structure |
|---|
Score = 64.2 bits (157), Expect = 1e-11
Identities = 50/227 (22%), Positives = 71/227 (31%), Gaps = 49/227 (21%)
Query: 27 FGRMLGRGQFGVSY---LCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQI------- 76
LG G FGV + A K + + D RE+
Sbjct: 22 LLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHR 81
Query: 77 ---RLY--LSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLR 131
RLY + P + +V EL G L DR+ + +
Sbjct: 82 NLIRLYGVVLTPP--------------MKMVTELAPLGSLLDRLR-----KHQGHFLLGT 122
Query: 132 AIVNAVNVC------HSMGVMHRDLKPENFSFISRDDNALLKVTDFG-SALLFEEGQVYR 184
AV V S +HRDL N + L+K+ DFG L + Y
Sbjct: 123 LSRYAVQVAEGMGYLESKRFIHRDLAARN---LLLATRDLVKIGDFGLMRALPQNDDHYV 179
Query: 185 DIVGSGFYI---APEVLR-RRYGKEIDIWSAGVILYILLS-GVPPFW 226
APE L+ R + D W GV L+ + + G P+
Sbjct: 180 MQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWI 226
|
| >2pvb_A Protein (parvalbumin); calcium binding protein, metal binding protein; 0.91A {Esox lucius} SCOP: a.39.1.4 PDB: 1pvb_A 2pal_A 1pal_A 3pal_A 4pal_A 4cpv_A 1cdp_A 5cpv_A 1b8r_A 1b9a_A 1b8l_A 1b8c_A 1a75_B 1a75_A Length = 108 | Back alignment and structure |
|---|
Score = 60.3 bits (147), Expect = 1e-11
Identities = 25/103 (24%), Positives = 43/103 (41%), Gaps = 9/103 (8%)
Query: 359 LTEFDVKHLMEAVKNSSTLE-----SLCENLPTKEKQKLMEKFREMDTDNSDTLTLSELK 413
L + DV + A + + + + L +K + + F +D D S + ELK
Sbjct: 6 LKDADVAAALAACSAADSFKHKEFFAKV-GLASKSLDDVKKAFYVIDQDKSGFIEEDELK 64
Query: 414 AGLAKL---GSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMT 453
L AL ++E ++ GD DG+G I EF ++
Sbjct: 65 LFLQNFSPSARALTDAETKAFLADGDKDGDGMIGVDEFAAMIK 107
|
| >2pvb_A Protein (parvalbumin); calcium binding protein, metal binding protein; 0.91A {Esox lucius} SCOP: a.39.1.4 PDB: 1pvb_A 2pal_A 1pal_A 3pal_A 4pal_A 4cpv_A 1cdp_A 5cpv_A 1b8r_A 1b9a_A 1b8l_A 1b8c_A 1a75_B 1a75_A Length = 108 | Back alignment and structure |
|---|
Score = 45.6 bits (109), Expect = 2e-06
Identities = 9/56 (16%), Positives = 25/56 (44%), Gaps = 4/56 (7%)
Query: 421 SALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIYKLETPELLEKAFQYLDKNSD 476
+ L++++V + A + EF + ++ + ++KAF +D++
Sbjct: 4 AGLKDADVAAALAA--CSAADSFKHKEFFAKV--GLASKSLDDVKKAFYVIDQDKS 55
|
| >3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298 | Back alignment and structure |
|---|
Score = 63.8 bits (156), Expect = 2e-11
Identities = 59/234 (25%), Positives = 90/234 (38%), Gaps = 34/234 (14%)
Query: 27 FGRMLGRGQFGVSY---LCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQ 83
R++G+G FGV Y + A KS+ + + + RE + L+
Sbjct: 25 SDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSL--SRITEMQQVEAFLREGLLMRGLN-H 81
Query: 84 PNVVEFK--STYEDETAVHVVMELCEGGDL--FDRIIAKGYNSERDAATVLRAIVNAVNV 139
PNV+ E HV++ GDL F R S + TV I + V
Sbjct: 82 PNVLALIGIML-PPEGLPHVLLPYMCHGDLLQFIR-------SPQRNPTVKDLISFGLQV 133
Query: 140 CH------SMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYI 193
+HRDL N D++ +KV DFG A + + Y +
Sbjct: 134 ARGMEYLAEQKFVHRDLAARN---CMLDESFTVKVADFGLARDILDREYYSVQQHRHARL 190
Query: 194 -----APEVLR-RRYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQG 240
A E L+ R+ + D+WS GV+L+ LL+ G PP+ + QG
Sbjct: 191 PVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLAQG 244
|
| >1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279 | Back alignment and structure |
|---|
Score = 63.8 bits (156), Expect = 2e-11
Identities = 53/239 (22%), Positives = 92/239 (38%), Gaps = 54/239 (22%)
Query: 27 FGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQI---------- 76
LG GQFG ++ N + A KS+ K+ M + + + E +
Sbjct: 17 LVERLGAGQFGEVWMGYYN-GHTKVAVKSL-KQGSM--SPDAFL-AEANLMKQLQHQRLV 71
Query: 77 RLY--LSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGY--NSERDAATVLRA 132
RLY ++ +P ++++ E E G L D + T+ +
Sbjct: 72 RLYAVVTQEP--------------IYIITEYMENGSLVD------FLKTPSGIKLTINKL 111
Query: 133 IVNAVNVCH------SMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDI 186
+ A + +HRDL+ N I D K+ DFG A L E+ +
Sbjct: 112 LDMAAQIAEGMAFIEERNYIHRDLRAAN---ILVSDTLSCKIADFGLARLIEDNEYTAR- 167
Query: 187 VGSGFYI---APEVLR-RRYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQG 240
G+ F I APE + + + D+WS G++L +++ G P+ T + +G
Sbjct: 168 EGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERG 226
|
| >1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454 | Back alignment and structure |
|---|
Score = 64.7 bits (158), Expect = 2e-11
Identities = 50/227 (22%), Positives = 94/227 (41%), Gaps = 30/227 (13%)
Query: 27 FGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNV 86
+ LG GQFG ++ T N + A K++ K M + + E + L +
Sbjct: 192 LEKKLGAGQFGEVWMATYN-KHTKVAVKTM-KPGSM--SVEAFL-AEANVMKTLQ-HDKL 245
Query: 87 VEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGY--NSERDAATVLRAIVNAVNVCH--- 141
V+ + E ++++ E G L D + + E + + I + +
Sbjct: 246 VKLHAVVTKE-PIYIITEFMAKGSLLD------FLKSDEGSKQPLPKLIDFSAQIAEGMA 298
Query: 142 ---SMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYI---AP 195
+HRDL+ N I + + K+ DFG A + E+ + Y G+ F I AP
Sbjct: 299 FIEQRNYIHRDLRAAN---ILVSASLVCKIADFGLARVIEDNE-YTAREGAKFPIKWTAP 354
Query: 196 EVLR-RRYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQG 240
E + + + D+WS G++L +++ G P+ + A+ +G
Sbjct: 355 EAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERG 401
|
| >3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373 | Back alignment and structure |
|---|
Score = 64.0 bits (156), Expect = 3e-11
Identities = 61/234 (26%), Positives = 91/234 (38%), Gaps = 32/234 (13%)
Query: 27 FGRMLGRGQFGVSY---LCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQ 83
F ++GRG FG Y L + A KS+ + E E I S
Sbjct: 93 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSL--NRITDIGEVSQFLTEGIIMKDFS-H 149
Query: 84 PNVVEFKST-YEDETAVHVVMELCEGGDL--FDRIIAKGYNSERDAATVLRAIVNAVNVC 140
PNV+ E + VV+ + GDL F R +E TV I + V
Sbjct: 150 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIR-------NETHNPTVKDLIGFGLQVA 202
Query: 141 H------SMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYI- 193
S +HRDL N D+ +KV DFG A + + +G +
Sbjct: 203 KGMKFLASKKFVHRDLAARN---CMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLP 259
Query: 194 ----APEVLR-RRYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQGE 241
A E L+ +++ + D+WS GV+L+ L++ G PP+ +LQG
Sbjct: 260 VKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR 313
|
| >1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313 | Back alignment and structure |
|---|
Score = 63.4 bits (155), Expect = 3e-11
Identities = 50/225 (22%), Positives = 75/225 (33%), Gaps = 48/225 (21%)
Query: 27 FGRMLGRGQFGVSYLCTENSTNRPYACKSIA----KKPKMRLAENDMIRREIQIRLYLSG 82
FG+ LG G FG T + A ++A K ++ E+++ YL
Sbjct: 27 FGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALM-SELKVLSYLGN 85
Query: 83 QPNVVEFKSTYEDETAVHVVMELCEGGDLFD------------RIIAKGYNSERDAATVL 130
N+V V+ E C GDL + + + A +
Sbjct: 86 HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLE 145
Query: 131 RAIVNAVNVCH------SMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYR 184
+ + V S +HRDL N I + K+ DFG A R
Sbjct: 146 DLLSFSYQVAKGMAFLASKNCIHRDLAARN---ILLTHGRITKICDFGLA---------R 193
Query: 185 DIVGSGFYI------------APEVLR-RRYGKEIDIWSAGVILY 216
DI Y+ APE + Y E D+WS G+ L+
Sbjct: 194 DIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLW 238
|
| >1k9u_A Polcalcin PHL P 7; pollen allergen, calcium-binding, EF-hand, cross-reactivity; 1.75A {Phleum pratense} SCOP: a.39.1.10 Length = 78 | Back alignment and structure |
|---|
Score = 58.3 bits (142), Expect = 3e-11
Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 3/77 (3%)
Query: 392 LMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNL 451
+ F+ DT+ ++LSEL L LGS + EV + M D DG+G ID EF++
Sbjct: 5 MERIFKRFDTNGDGKISLSELTDALRTLGSTSAD-EVQRMMAEIDTDGDGFIDFNEFISF 63
Query: 452 MTDIYKLETPELLEKAF 468
+ + K F
Sbjct: 64 CNA--NPGLMKDVAKVF 78
|
| >1gjy_A Sorcin, CP-22, V19; calcium binding, calcium-binding, phosphorylation; 2.2A {Chinese hamster} SCOP: a.39.1.8 Length = 167 | Back alignment and structure |
|---|
Score = 60.9 bits (148), Expect = 3e-11
Identities = 33/161 (20%), Positives = 55/161 (34%), Gaps = 26/161 (16%)
Query: 328 LKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLT--EFD---VKHLMEAV--KNSSTLE-- 378
L F ++G + DEL+ LT+ G F+ + ++ + S T+
Sbjct: 4 LYGYF-ASVAGQDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFN 62
Query: 379 ---SLCENLPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAG 435
L L + F D+D S T+ EL+ L +G L VN +
Sbjct: 63 EFKELWAVL-----NGWRQHFISFDSDRSGTVDPQELQKALTTMGFRLNPQTVNSIAKRY 117
Query: 436 DIDGNGNIDSIEFVNLMTDIYKLETPELLEKAFQYLDKNSD 476
G D +++ KL L +F+ D
Sbjct: 118 STSGKITFD--DYIACCV---KLRA---LTDSFRRRDSAQQ 150
|
| >1gjy_A Sorcin, CP-22, V19; calcium binding, calcium-binding, phosphorylation; 2.2A {Chinese hamster} SCOP: a.39.1.8 Length = 167 | Back alignment and structure |
|---|
Score = 48.5 bits (116), Expect = 6e-07
Identities = 21/91 (23%), Positives = 37/91 (40%), Gaps = 10/91 (10%)
Query: 326 QALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNSSTLE-----SL 380
++ FI D+D++GT+ EL+ LT +G L V + + S + +
Sbjct: 72 NGWRQHFISFDSDRSGTVDPQELQKALTTMGFRLNPQTVNSIAKRYSTSGKITFDDYIAC 131
Query: 381 CENLPTKEKQKLMEKFREMDTDNSDTLTLSE 411
C L + L + FR D+ + S
Sbjct: 132 CVKL-----RALTDSFRRRDSAQQGMVNFSY 157
|
| >2b1u_A Calmodulin-like protein 5; CLSP, calmodulin-like SKIN protein, solution structure, backbone dynamic, structural genomics; NMR {Homo sapiens} Length = 71 | Back alignment and structure |
|---|
Score = 57.9 bits (141), Expect = 3e-11
Identities = 18/66 (27%), Positives = 33/66 (50%)
Query: 388 EKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIE 447
+ L FR D D +T+ EL+ +A LG L + E++ + D+D +G ++ E
Sbjct: 4 GLEDLQVAFRAFDQDGDGHITVDELRRAMAGLGQPLPQEELDAMIREADVDQDGRVNYEE 63
Query: 448 FVNLMT 453
F ++
Sbjct: 64 FARMLA 69
|
| >2kz2_A Calmodulin, CAM; TR2C, metal binding protein; NMR {Gallus gallus} Length = 94 | Back alignment and structure |
|---|
Score = 58.4 bits (142), Expect = 4e-11
Identities = 23/68 (33%), Positives = 41/68 (60%)
Query: 386 TKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDS 445
T ++++ E FR D D + ++ +EL+ + LG L + EV++ + DIDG+G ++
Sbjct: 25 TDSEEEIREAFRVEDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNY 84
Query: 446 IEFVNLMT 453
EFV +MT
Sbjct: 85 EEFVQMMT 92
|
| >1bjf_A Neurocalcin delta; calcium-binding, myristoylation, neuronal specific guanylate cyclase activator; 2.40A {Bos taurus} SCOP: a.39.1.5 Length = 193 | Back alignment and structure |
|---|
Score = 61.0 bits (148), Expect = 4e-11
Identities = 37/185 (20%), Positives = 63/185 (34%), Gaps = 43/185 (23%)
Query: 306 NKLKKLTIKVIVE--YLPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFD 363
+KL+ ++ ++E + E Q + F + +G LS +E +
Sbjct: 6 SKLRPEVMQDLLESTDFTEHEIQEWYKGF--LRDCPSGHLSMEEFKKIYGNFFPYGDA-- 61
Query: 364 VKHLMEAVKNSSTLESLCENLPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSAL 423
E++ FR D + T+ E L+
Sbjct: 62 --------------SKFAEHV-----------FRTFDANGDGTIDFREFIIALSVTSRGK 96
Query: 424 EESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIYKL-----------ETPE-LLEKAFQYL 471
E ++ D+DGNG I E + ++ IYK+ TPE EK F+ +
Sbjct: 97 LEQKLKWAFSMYDLDGNGYISKAEMLEIVQAIYKMVSSVMKMPEDESTPEKRTEKIFRQM 156
Query: 472 DKNSD 476
D N D
Sbjct: 157 DTNRD 161
|
| >1bjf_A Neurocalcin delta; calcium-binding, myristoylation, neuronal specific guanylate cyclase activator; 2.40A {Bos taurus} SCOP: a.39.1.5 Length = 193 | Back alignment and structure |
|---|
Score = 40.6 bits (95), Expect = 4e-04
Identities = 32/144 (22%), Positives = 51/144 (35%), Gaps = 25/144 (17%)
Query: 300 KQFRRMNKLKKLT----IKVIVEYLPDEETQALKEK-FIEMDTDKNGTLSYDELRAGLTK 354
K F R L+ K+ + P + E F D + +GT+ + E L+
Sbjct: 32 KGFLRDCPSGHLSMEEFKKIYGNFFPYGDASKFAEHVFRTFDANGDGTIDFREFIIALSV 91
Query: 355 VGSMLTE---------FDVKH--------LMEAVKNSSTLESLCENLPTKEKQ--KLMEK 395
E +D+ ++E V+ + S +P E K EK
Sbjct: 92 TSRGKLEQKLKWAFSMYDLDGNGYISKAEMLEIVQAIYKMVSSVMKMPEDESTPEKRTEK 151
Query: 396 -FREMDTDNSDTLTLSELKAGLAK 418
FR+MDT+ L+L E G
Sbjct: 152 IFRQMDTNRDGKLSLEEFIRGAKS 175
|
| >2sas_A Sarcoplasmic calcium-binding protein; 2.40A {Branchiostoma lanceolatum} SCOP: a.39.1.5 Length = 185 | Back alignment and structure |
|---|
Score = 60.3 bits (146), Expect = 6e-11
Identities = 21/175 (12%), Positives = 49/175 (28%), Gaps = 35/175 (20%)
Query: 320 LPDEETQALKEKFIEM-DTDKNGTLSYDELRAGLTKVGSML-------TEFDVKHLME-- 369
L D + Q +K F D + +G++ ++ +T+ + ++ +E
Sbjct: 2 LNDFQKQKIKFTFDFFLDMNHDGSIQDNDFEDMMTRYKEVNKGSLSDADYKSMQASLEDE 61
Query: 370 -----------------------AVKNSSTLESLCENLPTKEKQKLMEKFREMDTDNSDT 406
+ + +LP + ++ F+ MD
Sbjct: 62 WRDLKGRADINKDDVVSWEEYLAMWEKTIATCKSVADLPAWCQNRIPFLFKGMDVSGDGI 121
Query: 407 LTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIYKLETP 461
+ L E + L+ ++V G D + L +
Sbjct: 122 VDLEEFQNYCKNFQ--LQCADVPAVYNVITDGGKVTFDLNRYKELYYRLLTSPAA 174
|
| >2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656 | Back alignment and structure |
|---|
Score = 63.3 bits (154), Expect = 8e-11
Identities = 52/238 (21%), Positives = 88/238 (36%), Gaps = 45/238 (18%)
Query: 27 FGRMLGRGQFGVSY---LCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQI------- 76
GR +G GQFG + + + A K+ K ++ E
Sbjct: 394 LGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTC-KNCTSDSVREKFLQ-EALTMRQFDHP 451
Query: 77 ---RLYLSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAI 133
+L G V+ + ++MELC G+L + + + + + I
Sbjct: 452 HIVKLI--G---VITENPVW-------IIMELCTLGELRSFLQVR-----KFSLDLASLI 494
Query: 134 VNAVNVC------HSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIV 187
+ A + S +HRD+ N + N +K+ DFG + E+ Y+
Sbjct: 495 LYAYQLSTALAYLESKRFVHRDIAARN---VLVSSNDCVKLGDFGLSRYMEDSTYYKASK 551
Query: 188 GSG--FYIAPEVLR-RRYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQGE 241
G ++APE + RR+ D+W GV ++ +L GV PF I GE
Sbjct: 552 GKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE 609
|
| >2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327 | Back alignment and structure |
|---|
Score = 61.9 bits (151), Expect = 9e-11
Identities = 47/239 (19%), Positives = 85/239 (35%), Gaps = 36/239 (15%)
Query: 27 FGRMLGRGQFGVSYLCTENSTNRPYACKSIA----KKPKMRLAENDMIRREIQIRLYLSG 82
R LG G FG Y + + +A + E D + E I +
Sbjct: 34 LIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM-EALIISKFN- 91
Query: 83 QPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVN-AVNVCH 141
N+V ++MEL GGDL + + ++ + +++ A ++
Sbjct: 92 HQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIAC 151
Query: 142 ------SMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFY--- 192
+HRD+ N + K+ DFG A RDI + +Y
Sbjct: 152 GCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMA---------RDIYRASYYRKG 202
Query: 193 ---------IAPEVLR-RRYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQG 240
+ PE + + D WS GV+L+ + S G P+ +++ + + + G
Sbjct: 203 GCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSG 261
|
| >2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Length = 333 | Back alignment and structure |
|---|
Score = 62.3 bits (152), Expect = 9e-11
Identities = 49/221 (22%), Positives = 78/221 (35%), Gaps = 44/221 (19%)
Query: 27 FGRMLGRGQFGVSYLCTENSTNRPYACKSIA----KKPKMRLAENDMIRREIQIRLYLSG 82
FG+ LG G FG T + A +A K + ++ E++I +L
Sbjct: 50 FGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALM-SELKIMSHLGQ 108
Query: 83 QPNVVEFKSTYEDETAVHVVMELCEGGDLFD--------RIIAKGYNSERDAATVLRAIV 134
N+V V V+ E C GDL + + A+ +
Sbjct: 109 HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLH 168
Query: 135 NAVNVCH------SMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVG 188
+ V S +HRD+ N + + + K+ DFG A RDI+
Sbjct: 169 FSSQVAQGMAFLASKNCIHRDVAARN---VLLTNGHVAKIGDFGLA---------RDIMN 216
Query: 189 SGFYI------------APEVLR-RRYGKEIDIWSAGVILY 216
YI APE + Y + D+WS G++L+
Sbjct: 217 DSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLW 257
|
| >4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289 | Back alignment and structure |
|---|
Score = 61.2 bits (149), Expect = 1e-10
Identities = 33/242 (13%), Positives = 64/242 (26%), Gaps = 45/242 (18%)
Query: 27 FGRMLGRGQFGVSYLCTENSTNRPYACKSIA------KKPKMRLAENDMIRREIQIRLYL 80
F LG+G F + K +E + L
Sbjct: 12 FNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSE-SFF-EAASMMSKL 69
Query: 81 SGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGY-NSERDAATVLRAIVNAVNV 139
S ++V +V E + G L Y ++ +L + A +
Sbjct: 70 S-HKHLVLNYGVCVCGDENILVQEFVKFGSLDT------YLKKNKNCINILWKLEVAKQL 122
Query: 140 CH------SMGVMHRDLKPEN-----FSFISRDDNALLKVTDFGSALLFEEGQVYRDIVG 188
++H ++ +N + +K++D G + ++
Sbjct: 123 AAAMHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGIS---------ITVLP 173
Query: 189 SGFY------IAPEVL--RRRYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQ 239
+ PE + + D WS G L+ + S G P A +
Sbjct: 174 KDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQFYED 233
Query: 240 GE 241
Sbjct: 234 RH 235
|
| >2l2e_A Calcium-binding protein NCS-1; NCS1P, myristoylated, metal binding protein; HET: MYR; NMR {Schizosaccharomyces pombe} Length = 190 | Back alignment and structure |
|---|
Score = 59.4 bits (144), Expect = 2e-10
Identities = 30/194 (15%), Positives = 64/194 (32%), Gaps = 31/194 (15%)
Query: 303 RRMNKLKKLTIKVIVE--YLPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLT 360
+ +KL + ++ +V +E Q + F +G L+ E + +
Sbjct: 3 KSQSKLSQDQLQDLVRSTRFDKKELQQWYKGF--FKDCPSGHLNKSEFQKIYKQFFPFGD 60
Query: 361 E-FDVKHLMEA--------VKNSSTLESLCENLPTKEKQKLMEKFREMDTDNSDTLTLSE 411
+++ + + +L + KL+ F+ D DN+ ++ E
Sbjct: 61 PSAFAEYVFNVFDADKNGYIDFKEFICALSVTSRGELNDKLIWAFQLYDLDNNGLISYDE 120
Query: 412 L----KAGLAKLGSALEESE--------VNQYMEAGDIDGNGNIDSIEFVNLMTDIYKLE 459
+ A +GS ++ E VN+ D + +G + EF
Sbjct: 121 MLRIVDAIYKMVGSMVKLPEDEDTPEKRVNKIFNMMDKNKDGQLTLEEFCEGS-----KR 175
Query: 460 TPELLEKAFQYLDK 473
P ++ A D
Sbjct: 176 DPTIV-SALSLYDG 188
|
| >2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... Length = 316 | Back alignment and structure |
|---|
Score = 60.7 bits (148), Expect = 2e-10
Identities = 53/225 (23%), Positives = 87/225 (38%), Gaps = 49/225 (21%)
Query: 27 FGRMLGRGQFGVSYLCTENSTNRPYACKSIA----KKPKMRLAENDMIRREIQIRLYLSG 82
G+ LGRG FG ++ C+++A K+ ++ E++I +++
Sbjct: 31 LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALM-SELKILIHIGH 89
Query: 83 QPNVVEF--KSTYEDETAVHVVMELCEGGDL----------FDRIIAKGYNSERDAATVL 130
NVV T + V++E C+ G+L F + +D T+
Sbjct: 90 HLNVVNLLGACTKPGG-PLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLE 148
Query: 131 RAIVNAVNVCH------SMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYR 184
I + V S +HRDL N I + ++K+ DFG A R
Sbjct: 149 HLICYSFQVAKGMEFLASRKCIHRDLAARN---ILLSEKNVVKICDFGLA---------R 196
Query: 185 DIVGSGFYI------------APEVLR-RRYGKEIDIWSAGVILY 216
DI Y+ APE + R Y + D+WS GV+L+
Sbjct: 197 DIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLW 241
|
| >1wy9_A Allograft inflammatory factor 1; EF-hand, calucium binding, metal binding protein; 2.10A {Mus musculus} PDB: 2g2b_A Length = 147 | Back alignment and structure |
|---|
Score = 58.0 bits (140), Expect = 2e-10
Identities = 16/91 (17%), Positives = 33/91 (36%), Gaps = 4/91 (4%)
Query: 387 KEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSI 446
+ + K+ E D + + + + LK L KLG E+ + +
Sbjct: 45 SKLEAFKVKYMEFDLNGNGDIDIMSLKRMLEKLGVPKTHLELKRLIREVSSGSEETFSYS 104
Query: 447 EFVNLMTDIYKLETPELLEKAFQYLDKNSDQ 477
+F+ +M + +L Y +KN +
Sbjct: 105 DFLRMMLG----KRSAILRMILMYEEKNKEH 131
|
| >1wy9_A Allograft inflammatory factor 1; EF-hand, calucium binding, metal binding protein; 2.10A {Mus musculus} PDB: 2g2b_A Length = 147 | Back alignment and structure |
|---|
Score = 48.4 bits (115), Expect = 5e-07
Identities = 20/79 (25%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Query: 296 ILRMKQFRRMNKLKKLTI---KVIVEYLPDEETQALKEKFIEMDTDKNGTLSYDELRAGL 352
+L+ +Q R+ + K + K + + +A K K++E D + NG + L+ L
Sbjct: 15 LLKAQQEERLEGINKQFLDDPKYSNDEDLPSKLEAFKVKYMEFDLNGNGDIDIMSLKRML 74
Query: 353 TKVGSMLTEFDVKHLMEAV 371
K+G T ++K L+ V
Sbjct: 75 EKLGVPKTHLELKRLIREV 93
|
| >3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367 | Back alignment and structure |
|---|
Score = 61.3 bits (149), Expect = 2e-10
Identities = 47/239 (19%), Positives = 86/239 (35%), Gaps = 36/239 (15%)
Query: 27 FGRMLGRGQFGVSYLCTENSTNRPYACKSIA----KKPKMRLAENDMIRREIQIRLYLSG 82
R LG G FG Y + + +A + E D + E I +
Sbjct: 75 LIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM-EALIISKFN- 132
Query: 83 QPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVN-AVNVCH 141
N+V +++EL GGDL + + ++ + +++ A ++
Sbjct: 133 HQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIAC 192
Query: 142 ------SMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFY--- 192
+HRD+ N + K+ DFG A RDI +G+Y
Sbjct: 193 GCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMA---------RDIYRAGYYRKG 243
Query: 193 ---------IAPEVLR-RRYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQG 240
+ PE + + D WS GV+L+ + S G P+ +++ + + + G
Sbjct: 244 GCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSG 302
|
| >1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322 | Back alignment and structure |
|---|
Score = 60.8 bits (148), Expect = 2e-10
Identities = 48/243 (19%), Positives = 86/243 (35%), Gaps = 44/243 (18%)
Query: 27 FGRMLGRGQFGVSYLCT-----ENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLS 81
R LG+G FG+ Y ++ A K++ + + + E +
Sbjct: 29 MSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTV-NEAASMRERIEFL-NEASVMKEF- 85
Query: 82 GQPNVVEFKSTYEDETAVHVVMELCEGGDLFD----RIIAKGYNSERDAATVLRAIVNAV 137
+VV V+MEL GDL A N ++ + I A
Sbjct: 86 NCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAG 145
Query: 138 NVC------HSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGF 191
+ ++ +HRDL N ++ +K+ DFG RDI + +
Sbjct: 146 EIADGMAYLNANKFVHRDLAARN---CMVAEDFTVKIGDFGMT---------RDIYETDY 193
Query: 192 Y------------IAPEVLR-RRYGKEIDIWSAGVILY-ILLSGVPPFWAETKKGTYDAI 237
Y ++PE L+ + D+WS GV+L+ I P+ + + +
Sbjct: 194 YRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFV 253
Query: 238 LQG 240
++G
Sbjct: 254 MEG 256
|
| >3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A Length = 364 | Back alignment and structure |
|---|
Score = 61.3 bits (149), Expect = 2e-10
Identities = 38/183 (20%), Positives = 69/183 (37%), Gaps = 25/183 (13%)
Query: 24 HYFFGRMLGRGQFGVSYLCTENS-----TNRPYACKSIAKKPK---------MRLAENDM 69
+ G +G+G FG YL NS ++ P K R A+ +
Sbjct: 36 AWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQ 95
Query: 70 IRREIQIR-LYLSGQPNVVEFKSTYEDETAVHV-VMELCEGGDLFDRIIAKGYN-SERDA 126
I++ I+ R L G P ++ + +M+ G DL A S +
Sbjct: 96 IQKWIRTRKLKYLGVPKYWGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEANAKRFSRK-- 152
Query: 127 ATVLRA---IVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVY 183
TVL+ I++ + H +H D+K N ++ + + + D+G A + V+
Sbjct: 153 -TVLQLSLRILDILEYIHEHEYVHGDIKASNL-LLNYKNPDQVYLVDYGLAYRYCPEGVH 210
Query: 184 RDI 186
+
Sbjct: 211 KAY 213
|
| >3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} Length = 382 | Back alignment and structure |
|---|
Score = 60.5 bits (147), Expect = 4e-10
Identities = 47/226 (20%), Positives = 82/226 (36%), Gaps = 50/226 (22%)
Query: 27 FGRMLGRGQFGVSYLCT-------ENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLY 79
G+ LG G FG L + + A K + K +D+I E+++
Sbjct: 73 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKML-KSDATEKDLSDLIS-EMEMMKM 130
Query: 80 LSGQPNVVEFKSTYEDETAVHVVMELCEGGDL----------FDRIIAKGYNSERDAATV 129
+ N++ + ++V++E G+L ++ + +
Sbjct: 131 IGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSS 190
Query: 130 LRAIVNAVNVCH------SMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVY 183
+ A V S +HRDL N + ++ ++K+ DFG A
Sbjct: 191 KDLVSCAYQVARGMEYLASKKCIHRDLAARN---VLVTEDNVMKIADFGLA--------- 238
Query: 184 RDIVGSGFYI------------APEVLR-RRYGKEIDIWSAGVILY 216
RDI +Y APE L R Y + D+WS GV+L+
Sbjct: 239 RDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLW 284
|
| >3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297 | Back alignment and structure |
|---|
Score = 59.6 bits (145), Expect = 4e-10
Identities = 55/238 (23%), Positives = 90/238 (37%), Gaps = 29/238 (12%)
Query: 27 FGRMLGRGQFGVSYLCTENSTNRPYACKSIA-K--KPKMRLAENDMIRREIQIRLYLSGQ 83
R LG G FG +L + + +A K K A D RE ++ L
Sbjct: 19 LKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQ-REAELLTNLQ-H 76
Query: 84 PNVVEFKSTYEDETAVHVVMELCEGGDL----------FDRIIAKGYNSERDAATVLRAI 133
++V+F D + +V E + GDL ++ + + + +
Sbjct: 77 EHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQML 136
Query: 134 VNAVNVCH------SMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIV 187
A + S +HRDL N N L+K+ DFG + YR
Sbjct: 137 HIASQIASGMVYLASQHFVHRDLATRN---CLVGANLLVKIGDFGMSRDVYSTDYYRVGG 193
Query: 188 GSGFYI---APEVLR-RRYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQG 240
+ I PE + R++ E D+WS GVIL+ + + G P++ + + I QG
Sbjct: 194 HTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIECITQG 251
|
| >3h4s_E KCBP interacting Ca2+-binding protein; kinesin, motor protein, regulation, complex, calcium, EF- hand, calmodulin, ATP-binding, microtubule; HET: ADP; 2.40A {Arabidopsis thaliana} Length = 135 | Back alignment and structure |
|---|
Score = 56.6 bits (137), Expect = 4e-10
Identities = 25/147 (17%), Positives = 52/147 (35%), Gaps = 32/147 (21%)
Query: 328 LKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNSSTLESLCENLPTK 387
K +E + Y+++ L + + +
Sbjct: 5 EKSMLLETTSTTKMETKYEDM---LPVMAEKMDVEE------------------------ 37
Query: 388 EKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGS-ALEESEVNQYMEAGDIDGNGNIDSI 446
+L + F + +T L+ LG + + + + GD+DG+G ++
Sbjct: 38 FVSELCKGFSLLADPERHLITAESLRRNSGILGIEGMSKEDAQGMVREGDLDGDGALNQT 97
Query: 447 EFVNLMTDIYKLETPELLEKAFQYLDK 473
EF LM + +PE++E A +L+K
Sbjct: 98 EFCVLMVRL----SPEMMEDAETWLEK 120
|
| >3h4s_E KCBP interacting Ca2+-binding protein; kinesin, motor protein, regulation, complex, calcium, EF- hand, calmodulin, ATP-binding, microtubule; HET: ADP; 2.40A {Arabidopsis thaliana} Length = 135 | Back alignment and structure |
|---|
Score = 43.1 bits (102), Expect = 2e-05
Identities = 7/53 (13%), Positives = 13/53 (24%), Gaps = 1/53 (1%)
Query: 425 ESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIYKLETPEL-LEKAFQYLDKNSD 476
E + + + +M + +E L K F L
Sbjct: 2 EPTEKSMLLETTSTTKMETKYEDMLPVMAEKMDVEEFVSELCKGFSLLADPER 54
|
| >1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 Length = 344 | Back alignment and structure |
|---|
Score = 59.6 bits (145), Expect = 6e-10
Identities = 48/233 (20%), Positives = 79/233 (33%), Gaps = 59/233 (25%)
Query: 27 FGRMLGRGQFGVSYLCT-----ENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLS 81
FG++LG G FG T + + A K + K+ ++ E+++ L
Sbjct: 49 FGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKML-KEKADSSEREALMS-ELKMMTQLG 106
Query: 82 GQPNVVEFK--STYEDETAVHVVMELCEGGDLFD-----RIIAKGYNSERDAATVLRAIV 134
N+V T +++ E C GDL + R E + L
Sbjct: 107 SHENIVNLLGACTLSGPI--YLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEE 164
Query: 135 NAVNVCH------------------SMGVMHRDLKPENFSFISRDDNALLKVTDFGSALL 176
+ + +HRDL N + ++K+ DFG A
Sbjct: 165 DLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARN---VLVTHGKVVKICDFGLA-- 219
Query: 177 FEEGQVYRDIVGSGFYI------------APEVLR-RRYGKEIDIWSAGVILY 216
RDI+ Y+ APE L Y + D+WS G++L+
Sbjct: 220 -------RDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLW 265
|
| >1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327 | Back alignment and structure |
|---|
Score = 59.6 bits (145), Expect = 6e-10
Identities = 53/237 (22%), Positives = 87/237 (36%), Gaps = 31/237 (13%)
Query: 27 FGRMLGRGQFGVSYLCT--ENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQP 84
F ++G G FG ++ A K + K+ + D E+++ L P
Sbjct: 29 FQDVIGEGNFGQVLKARIKKDGLRMDAAIKRM-KEYASKDDHRDFAG-ELEVLCKLGHHP 86
Query: 85 NVVEFKSTYEDETAVHVVMELCEGGDLFD----------RIIAKGYNSERDAATVLRAIV 134
N++ E +++ +E G+L D NS + + +
Sbjct: 87 NIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLH 146
Query: 135 NAVNVCH------SMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVG 188
A +V +HRDL N I +N + K+ DFG L +VY
Sbjct: 147 FAADVARGMDYLSQKQFIHRDLAARN---ILVGENYVAKIADFG---LSRGQEVYVKKTM 200
Query: 189 SGFYI---APEVLR-RRYGKEIDIWSAGVILY-ILLSGVPPFWAETKKGTYDAILQG 240
+ A E L Y D+WS GV+L+ I+ G P+ T Y+ + QG
Sbjct: 201 GRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQG 257
|
| >2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... Length = 334 | Back alignment and structure |
|---|
Score = 59.2 bits (144), Expect = 7e-10
Identities = 48/251 (19%), Positives = 87/251 (34%), Gaps = 51/251 (20%)
Query: 27 FGRMLGRGQFGVSYLCT-------ENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLY 79
G+ LG G FG + + A K + K +D++ E+++
Sbjct: 39 LGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKML-KDDATEKDLSDLVS-EMEMMKM 96
Query: 80 LSGQPNVVEFKSTYEDETAVHVVMELCEGGDL----------FDRIIAKGYNSERDAATV 129
+ N++ + ++V++E G+L + T
Sbjct: 97 IGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTF 156
Query: 130 LRAIVNAVNVCH------SMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVY 183
+ + S +HRDL N + +N ++K+ DFG A
Sbjct: 157 KDLVSCTYQLARGMEYLASQKCIHRDLAARN---VLVTENNVMKIADFGLA--------- 204
Query: 184 RDIVGSGFYI------------APEVLR-RRYGKEIDIWSAGVILY-ILLSGVPPFWAET 229
RDI +Y APE L R Y + D+WS GV+++ I G P+
Sbjct: 205 RDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP 264
Query: 230 KKGTYDAILQG 240
+ + + +G
Sbjct: 265 VEELFKLLKEG 275
|
| >1c7v_A CAVP, calcium vector protein; EF-hand family, calcium binding protein, metal binding protein; NMR {Branchiostoma lanceolatum} SCOP: a.39.1.5 PDB: 1c7w_A Length = 81 | Back alignment and structure |
|---|
Score = 53.7 bits (130), Expect = 1e-09
Identities = 20/71 (28%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 384 LPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLG-SALEESEVNQYMEAGDIDGNGN 442
+ ++++++ F+ D + + E K + K+G L ++EV + M+ D DGNG
Sbjct: 2 VRQDDEEEILRAFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNGV 61
Query: 443 IDSIEFVNLMT 453
ID EF++L+
Sbjct: 62 IDIPEFMDLIK 72
|
| >3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase, neurotrophic tyrosine kinase, receptor-related NTRKR2; 2.90A {Homo sapiens} Length = 289 | Back alignment and structure |
|---|
Score = 58.0 bits (141), Expect = 1e-09
Identities = 48/239 (20%), Positives = 82/239 (34%), Gaps = 30/239 (12%)
Query: 27 FGRMLGRGQFGVSYLCTENSTNRPYACKSIA----KKPKMRLAENDMIRREIQIRLYLSG 82
F LG +FG Y +++A K + E +R L
Sbjct: 13 FMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFR-HEAMLRARLQ- 70
Query: 83 QPNVVEFKSTYEDETAVHVVMELCEGGDL----------FDRIIAKGYNSERDAATVLRA 132
PNVV + + ++ C GDL D + + A
Sbjct: 71 HPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDF 130
Query: 133 IVNAVNVCH------SMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDI 186
+ + S V+H+DL N + D +K++D G Y+ +
Sbjct: 131 VHLVAQIAAGMEYLSSHHVVHKDLATRN---VLVYDKLNVKISDLGLFREVYAADYYKLL 187
Query: 187 VGSGFYI---APEVLR-RRYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQG 240
S I APE + ++ + DIWS GV+L+ + S G+ P+ + + + I
Sbjct: 188 GNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIRNR 246
|
| >2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A Length = 370 | Back alignment and structure |
|---|
Score = 58.1 bits (141), Expect = 2e-09
Identities = 50/251 (19%), Positives = 92/251 (36%), Gaps = 51/251 (20%)
Query: 27 FGRMLGRGQFGVSYLCT-------ENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLY 79
G+ LG G FG + + A K + K +D++ E+++
Sbjct: 85 LGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKML-KDDATEKDLSDLVS-EMEMMKM 142
Query: 80 LSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFD-----RIIAKGYNSERDAA-----TV 129
+ N++ + ++V++E G+L + R Y+ + + T
Sbjct: 143 IGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTF 202
Query: 130 LRAIVNAVNVCH------SMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVY 183
+ + S +HRDL N + +N ++K+ DFG A
Sbjct: 203 KDLVSCTYQLARGMEYLASQKCIHRDLAARN---VLVTENNVMKIADFGLA--------- 250
Query: 184 RDIVGSGFYI------------APEVLR-RRYGKEIDIWSAGVILY-ILLSGVPPFWAET 229
RDI +Y APE L R Y + D+WS GV+++ I G P+
Sbjct: 251 RDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP 310
Query: 230 KKGTYDAILQG 240
+ + + +G
Sbjct: 311 VEELFKLLKEG 321
|
| >2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens} Length = 352 | Back alignment and structure |
|---|
Score = 58.2 bits (141), Expect = 2e-09
Identities = 30/173 (17%), Positives = 61/173 (35%), Gaps = 29/173 (16%)
Query: 24 HYFFGRMLGRGQFGVSYL--------CTENSTNRPYACKSIAKKPK--------MRLAEN 67
+ R G+ Y C + ++ K AK + R A+
Sbjct: 43 QWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKDGRLFNEQNFFQRAAKP 102
Query: 68 DMIRREIQI-RLYLSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFD--RIIAKGYNSER 124
+ + ++ L P + F + + V+ G L + K SER
Sbjct: 103 LQVNKWKKLYSTPLLAIPTCMGFGVHQDKYRFL--VLPSL-GRSLQSALDVSPKHVLSER 159
Query: 125 DAATVLRA---IVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSA 174
+VL+ +++A+ H +H ++ EN F+ +D + + + +G A
Sbjct: 160 ---SVLQVACRLLDALEFLHENEYVHGNVTAENI-FVDPEDQSQVTLAGYGFA 208
|
| >1yx7_A Calsensin, LAN3-6 antigen; calcium-binding protein EF-hand, helix-loop- helix, nervous system, metal binding protein; NMR {Haemopis marmorata} PDB: 1yx8_A Length = 83 | Back alignment and structure |
|---|
Score = 53.0 bits (128), Expect = 3e-09
Identities = 15/78 (19%), Positives = 34/78 (43%), Gaps = 6/78 (7%)
Query: 384 LPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALE------ESEVNQYMEAGDI 437
+ K K +L F+++D + +T EL+ + L + + + ++ D
Sbjct: 1 MACKVKAELEAAFKKLDANGDGYVTALELQTFMVTLDAYKALSKDKVKEASAKLIKMADK 60
Query: 438 DGNGNIDSIEFVNLMTDI 455
+ +G I EF+N ++
Sbjct: 61 NSDGKISKEEFLNANAEL 78
|
| >1sjj_A Actinin; 3-helix bundle, calponin homology domain, calmodulin-like domain, actin binding protein, contractIle protein; 20.00A {Gallus gallus} SCOP: i.15.1.1 Length = 863 | Back alignment and structure |
|---|
Score = 58.4 bits (140), Expect = 3e-09
Identities = 28/219 (12%), Positives = 81/219 (36%), Gaps = 9/219 (4%)
Query: 256 AKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASDDTSVILRMKQFRRMNKLKKLTIKV 315
++ R+ + +++ A + PW++ E S+ + ++N L++ +
Sbjct: 595 MEEHARQQQNERLRKQFGAQANVIGPWIQTKMEEIGRISIEMHGTLEDQLNHLRQYEKSI 654
Query: 316 IVEYLPDEETQALKEKFIEMDTDKNGTL--SYDELRAGLTKVGSMLTEFDVKHLMEAVKN 373
+ ++ + ++ E N + + +R G ++ + + + + +
Sbjct: 655 VNYKPKIDQLEGDHQQIQEALIFDNKHTNYTMEHIRVGWEQLLTTIART-INEVENQILT 713
Query: 374 SSTLESLCENLPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYME 433
E + + F D + + + +A L +G + E+E + M
Sbjct: 714 RDAKGISQEQM-----NEFRASFNHFDRKKTGMMDCEDFRACLISMGYNMGEAEFARIMS 768
Query: 434 AGDIDGNGNIDSIEFVNLMTDIYK-LETPELLEKAFQYL 471
D + G + F++ M+ +T + + +F+ L
Sbjct: 769 IVDPNRMGVVTFQAFIDFMSRETADTDTADQVMASFKIL 807
|
| >4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329 | Back alignment and structure |
|---|
Score = 57.3 bits (139), Expect = 3e-09
Identities = 54/237 (22%), Positives = 85/237 (35%), Gaps = 28/237 (11%)
Query: 27 FGRMLGRGQFGVSYLCTENSTNRPYACKSIA-K--KPKMRLAENDMIRREIQIRLYLSGQ 83
LG G FG +L ++ +A K K A D RE ++ L
Sbjct: 45 LKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQ-REAELLTMLQ-H 102
Query: 84 PNVVEFKSTYEDETAVHVVMELCEGGDLFD-----RIIAKGYNSERDAATVLRAIVNAVN 138
++V F + + +V E GDL AK D A + +
Sbjct: 103 QHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLA 162
Query: 139 VCH----------SMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVG 188
V + +HRDL N ++K+ DFG + YR
Sbjct: 163 VASQVAAGMVYLAGLHFVHRDLATRN---CLVGQGLVVKIGDFGMSRDIYSTDYYRVGGR 219
Query: 189 SGFYI---APEVLR-RRYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQG 240
+ I PE + R++ E D+WS GV+L+ + + G P++ + D I QG
Sbjct: 220 TMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQG 276
|
| >1c07_A Protein (epidermal growth factor receptor pathway substrate 15); calcium binding, signaling domain, NPF binding, FW binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6 Length = 95 | Back alignment and structure |
|---|
Score = 51.6 bits (124), Expect = 1e-08
Identities = 14/69 (20%), Positives = 24/69 (34%), Gaps = 2/69 (2%)
Query: 384 LPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNI 443
+ EK K E F + D D ++ E++ K G L + + D G +
Sbjct: 4 VSPAEKAKYDEIFLKTDKDMDGFVSGLEVREIFLKTG--LPSTLLAHIWSLCDTKDCGKL 61
Query: 444 DSIEFVNLM 452
+F
Sbjct: 62 SKDQFALAF 70
|
| >1iq3_A Ralbp1-interacting protein (partner of ralbp1); EF-hand domain, POB1 EH domain, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: a.39.1.6 Length = 110 | Back alignment and structure |
|---|
Score = 50.9 bits (122), Expect = 3e-08
Identities = 16/69 (23%), Positives = 30/69 (43%), Gaps = 2/69 (2%)
Query: 384 LPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNI 443
+ ++++ + +FR + D S ++ S K K S L E++ E D D +G +
Sbjct: 16 ITEEQREYYVNQFRSLQPDPSSFISGSVAKNFFTK--SKLSIPELSYIWELSDADCDGAL 73
Query: 444 DSIEFVNLM 452
EF
Sbjct: 74 TLPEFCAAF 82
|
| >1fi6_A EH domain protein REPS1; EPS15 homology domain, EF hand, calcium, RAS signal transduction, endocytosis/exocytosis complex; NMR {Mus musculus} SCOP: a.39.1.6 Length = 92 | Back alignment and structure |
|---|
Score = 50.1 bits (120), Expect = 3e-08
Identities = 14/69 (20%), Positives = 28/69 (40%), Gaps = 2/69 (2%)
Query: 384 LPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNI 443
+ +++Q + +F+ + D + + S K K L E++ E D D +G +
Sbjct: 3 ITDEQRQYYVNQFKTIQPDLNGFIPGSAAKEFFTKSK--LPILELSHIWELSDFDKDGAL 60
Query: 444 DSIEFVNLM 452
EF
Sbjct: 61 TLDEFCAAF 69
|
| >2d8n_A Recoverin; structural genomics, NPPSFA, national project on protein STR and functional analyses, riken structural genomics/proteomi initiative; 2.20A {Homo sapiens} PDB: 2i94_A 1iku_A* 1jsa_A* 1omr_A 1rec_A 1la3_A* 1omv_A 2het_A Length = 207 | Back alignment and structure |
|---|
Score = 51.9 bits (124), Expect = 7e-08
Identities = 31/187 (16%), Positives = 58/187 (31%), Gaps = 45/187 (24%)
Query: 306 NKLKKLTIKVIVE--YLPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFD 363
L K ++ + +EE + + F + G ++ + ++ K
Sbjct: 14 GALSKEILEELQLNTKFSEEELCSWYQSF--LKDCPTGRITQQQFQSIYAKFFPDTDPKA 71
Query: 364 VKHLMEAVKNSSTLESLCENLPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSAL 423
+ FR D++ TL E L +
Sbjct: 72 YAQHV---------------------------FRSFDSNLDGTLDFKEYVIALHMTTAGK 104
Query: 424 EESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIYKLETP--------------ELLEKAFQ 469
++ D+DGNG I E + ++ I+K+ TP + EK ++
Sbjct: 105 TNQKLEWAFSLYDVDGNGTISKNEVLEIVMAIFKMITPEDVKLLPDDENTPEKRAEKIWK 164
Query: 470 YLDKNSD 476
Y KN D
Sbjct: 165 YFGKNDD 171
|
| >2d8n_A Recoverin; structural genomics, NPPSFA, national project on protein STR and functional analyses, riken structural genomics/proteomi initiative; 2.20A {Homo sapiens} PDB: 2i94_A 1iku_A* 1jsa_A* 1omr_A 1rec_A 1la3_A* 1omv_A 2het_A Length = 207 | Back alignment and structure |
|---|
Score = 40.0 bits (93), Expect = 7e-04
Identities = 35/166 (21%), Positives = 56/166 (33%), Gaps = 20/166 (12%)
Query: 257 KDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASDDTSVILRMKQFRRMNKLKKLTIKVI 316
+ L P RIT Q + +D + + + N L K
Sbjct: 36 CSWYQSFLKDCPTGRITQQQFQSI--YAKFFPDTDPKAYAQHVFRSFDSNLDGTLDFKEY 93
Query: 317 VEYLPDEETQALKEK----FIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVK 372
V L +K F D D NGT+S +E+ + + M+T DVK L +
Sbjct: 94 VIALHMTTAGKTNQKLEWAFSLYDVDGNGTISKNEVLEIVMAIFKMITPEDVKLLPD--- 150
Query: 373 NSSTLESLCENLPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAK 418
+ +T E E + ++ ++ D LT E G
Sbjct: 151 DENTPEKRAEKI-----------WKYFGKNDDDKLTEKEFIEGTLA 185
|
| >1qx2_A Vitamin D-dependent calcium-binding protein, INTE; EF-hand (helix-loop-helix) calcium binding protein, four-HEL domain, protein engineering; HET: FME; 1.44A {Bos taurus} SCOP: a.39.1.1 PDB: 1kcy_A 1kqv_A 1ksm_A 1n65_A 1ht9_A 4icb_A 1cdn_A 1clb_A 2bca_A 1ig5_A 1igv_A 3icb_A 1d1o_A 1b1g_A 2bcb_A 1boc_A 1bod_A Length = 76 | Back alignment and structure |
|---|
Score = 48.8 bits (117), Expect = 7e-08
Identities = 17/75 (22%), Positives = 36/75 (48%), Gaps = 4/75 (5%)
Query: 387 KEKQKLMEKFREMDTD--NSDTLTLSELKAGLAKLGSAL--EESEVNQYMEAGDIDGNGN 442
K +++ F + + ++ ELK + LG +L S +++ +E D +G+G
Sbjct: 2 KSPEEIKGAFEVFAAKEGDPNQISKEELKLVMQTLGPSLLKGMSTLDEMIEEVDKNGDGE 61
Query: 443 IDSIEFVNLMTDIYK 457
+ EF+ +M I +
Sbjct: 62 VSFEEFLVMMKKISQ 76
|
| >1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 Length = 343 | Back alignment and structure |
|---|
Score = 52.7 bits (127), Expect = 9e-08
Identities = 43/253 (16%), Positives = 86/253 (33%), Gaps = 50/253 (19%)
Query: 27 FGRMLGRGQFGVSYLCTENSTNRPYACKSIA----KKPKMRLAENDMIRREIQIRLYLSG 82
+ R +G G FG + +A K+ + D RE +
Sbjct: 51 YVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQ-REAALMAEFD- 108
Query: 83 QPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHS 142
PN+V+ + ++ E GDL + + + ++ + + V+
Sbjct: 109 NPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGP 168
Query: 143 MGVMHRDLKP------------ENFSFISRD---------DNALLKVTDFGSALLFEEGQ 181
+ + F+ RD +N ++K+ DFG +
Sbjct: 169 PPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLS------- 221
Query: 182 VYRDIVGSGFY------------IAPEVLR-RRYGKEIDIWSAGVILYILLS-GVPPFWA 227
R+I + +Y + PE + RY E D+W+ GV+L+ + S G+ P++
Sbjct: 222 --RNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYG 279
Query: 228 ETKKGTYDAILQG 240
+ + G
Sbjct: 280 MAHEEVIYYVRDG 292
|
| >1fpw_A Yeast frequenin, calcium-binding protein NCS-1; EF-hand, metal binding protein; NMR {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2ju0_A Length = 190 | Back alignment and structure |
|---|
Score = 51.0 bits (122), Expect = 1e-07
Identities = 33/184 (17%), Positives = 64/184 (34%), Gaps = 43/184 (23%)
Query: 307 KLKKLTIKVIVE--YLPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDV 364
KL K + + + Y E Q + F + +G L+ ++ + + D
Sbjct: 7 KLSKDDLTCLKQSTYFDRREIQQWHKGF--LRDCPSGQLAREDFVKIYKQFFPFGSPEDF 64
Query: 365 KHLMEAVKNSSTLESLCENLPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALE 424
+ + F D DN+ + E L+
Sbjct: 65 ANHL---------------------------FTVFDKDNNGFIHFEEFITVLSTTSRGTL 97
Query: 425 ESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIYKL-----------ETPE-LLEKAFQYLD 472
E +++ E D++ +G I E + ++ +YK+ TPE ++K F+ +D
Sbjct: 98 EEKLSWAFELYDLNHDGYITFDEMLTIVASVYKMMGSMVTLNEDEATPEMRVKKIFKLMD 157
Query: 473 KNSD 476
KN D
Sbjct: 158 KNED 161
|
| >1fpw_A Yeast frequenin, calcium-binding protein NCS-1; EF-hand, metal binding protein; NMR {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2ju0_A Length = 190 | Back alignment and structure |
|---|
Score = 41.0 bits (96), Expect = 3e-04
Identities = 18/100 (18%), Positives = 35/100 (35%), Gaps = 16/100 (16%)
Query: 319 YLPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNSSTLE 378
+ L F D + +G +++DE+ + V M+ + E +T E
Sbjct: 92 TSRGTLEEKLSWAFELYDLNHDGYITFDEMLTIVASVYKMMGSMVTLNEDE-----ATPE 146
Query: 379 SLCENLPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAK 418
+ + F+ MD + +TL E + G
Sbjct: 147 MRVKKI-----------FKLMDKNEDGYITLDEFREGSKV 175
|
| >2i7a_A Calpain 13; calcium-dependent cytoplasmic cysteine proteinases, like, EF-hand, structural genomics, structural genomics CON SGC, hydrolase; 1.80A {Homo sapiens} Length = 174 | Back alignment and structure |
|---|
Score = 50.3 bits (120), Expect = 1e-07
Identities = 20/164 (12%), Positives = 45/164 (27%), Gaps = 19/164 (11%)
Query: 324 ETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFD------VKHLMEAVKNSSTL 377
+ + + + +L+ L + D + L+ ++
Sbjct: 3 SSHHHHHHSSGL-VPRGSDIDATQLQGLLNQELLTGPPGDMFSLDECRSLVALMELKVNG 61
Query: 378 ESLCENLPT--KEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEES---EVNQYM 432
E K F+++ + L S+L + E+ +
Sbjct: 62 RLDQEEFARLWKRLVHYQHVFQKVQ-TSPGVLLSSDLWKAIENTDFLRGIFISRELLHLV 120
Query: 433 EAGDIDGNGNIDSIEFVNLMTDIYKLETPELLEKAFQYLDKNSD 476
D G + V + +LE + K F+ L K+
Sbjct: 121 TLRYSDSVGRVSFPSLVCFLM---RLEA---MAKTFRNLSKDGK 158
|
| >1s6c_A KV4 potassium channel-interacting protein kchip1B; EF-hand, transport protein; 2.00A {Rattus norvegicus} SCOP: a.39.1.5 PDB: 2nz0_A 2i2r_E Length = 183 | Back alignment and structure |
|---|
Score = 50.2 bits (120), Expect = 2e-07
Identities = 28/184 (15%), Positives = 58/184 (31%), Gaps = 47/184 (25%)
Query: 305 MNKLKKLTIKVIVEYLPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDV 364
+ +L+ T E Q L F + +G ++ + + +
Sbjct: 6 LEQLEAQT------NFTKRELQVLYRGF--KNEXPSGVVNEETFKQIYAQFFPHGDASTY 57
Query: 365 KHLMEAVKNSSTLESLCENLPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALE 424
H + F DT + ++ + L+ L
Sbjct: 58 AHYL---------------------------FNAFDTTQTGSVKFEDFVTALSILLRGTV 90
Query: 425 ESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIYKL-----------ETPE-LLEKAFQYLD 472
++ DI+ +G I+ E ++++ IY + +TP ++ FQ +D
Sbjct: 91 HEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMD 150
Query: 473 KNSD 476
KN D
Sbjct: 151 KNKD 154
|
| >1s6c_A KV4 potassium channel-interacting protein kchip1B; EF-hand, transport protein; 2.00A {Rattus norvegicus} SCOP: a.39.1.5 PDB: 2nz0_A 2i2r_E Length = 183 | Back alignment and structure |
|---|
Score = 40.6 bits (95), Expect = 4e-04
Identities = 17/99 (17%), Positives = 36/99 (36%), Gaps = 16/99 (16%)
Query: 320 LPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNSSTLES 379
L + L+ F D +K+G ++ +E+ + + M+ ++ L E T
Sbjct: 86 LRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKE-----DTPRQ 140
Query: 380 LCENLPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAK 418
+ F++MD + +TL E +
Sbjct: 141 HVDVF-----------FQKMDKNKDGIVTLDEFLESXQE 168
|
| >2kgr_A Intersectin-1; structure, alternative splicing, calcium, cell junction, cell projection, coiled coil, endocytosis, membrane, phosphoprotein; NMR {Homo sapiens} Length = 111 | Back alignment and structure |
|---|
Score = 48.6 bits (116), Expect = 2e-07
Identities = 17/69 (24%), Positives = 32/69 (46%), Gaps = 2/69 (2%)
Query: 384 LPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNI 443
+P + K + F D S LT + + L + S+L ++++ DID +G +
Sbjct: 8 VPQSSRLKYRQLFNSHDKTMSGHLTGPQARTILMQ--SSLPQAQLASIWNLSDIDQDGKL 65
Query: 444 DSIEFVNLM 452
+ EF+ M
Sbjct: 66 TAEEFILAM 74
|
| >1g8i_A Frequenin, neuronal calcium sensor 1; calcium binding-protein, EF-hand, calcium ION, metal binding protein; HET: 1PE P6G; 1.90A {Homo sapiens} SCOP: a.39.1.5 PDB: 2lcp_A Length = 190 | Back alignment and structure |
|---|
Score = 49.8 bits (119), Expect = 3e-07
Identities = 31/185 (16%), Positives = 62/185 (33%), Gaps = 45/185 (24%)
Query: 307 KLKKLTIKVIVE--YLPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDV 364
KLK ++ + Y ++E Q + F + +G L + +
Sbjct: 7 KLKPEVVEELTRKTYFTEKEVQQWYKGF--IKDCPSGQLDAAGFQKIYKQF--------- 55
Query: 365 KHLMEAVKNSSTLESLCENLPTKEKQKLMEK-FREMDTDNSDTLTLSELKAGLAKLGSAL 423
P + K F D + + SE L+
Sbjct: 56 -------------------FPFGDPTKFATFVFNVFDENKDGRIEFSEFIQALSVTSRGT 96
Query: 424 EESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIYKL-----------ETPE-LLEKAFQYL 471
+ ++ + D+D +G I E ++++ IY++ TPE +++ F +
Sbjct: 97 LDEKLRWAFKLYDLDNDGYITRNEMLDIVDAIYQMVGNTVELPEEENTPEKRVDRIFAMM 156
Query: 472 DKNSD 476
DKN+D
Sbjct: 157 DKNAD 161
|
| >1g8i_A Frequenin, neuronal calcium sensor 1; calcium binding-protein, EF-hand, calcium ION, metal binding protein; HET: 1PE P6G; 1.90A {Homo sapiens} SCOP: a.39.1.5 PDB: 2lcp_A Length = 190 | Back alignment and structure |
|---|
Score = 40.2 bits (94), Expect = 5e-04
Identities = 18/91 (19%), Positives = 32/91 (35%), Gaps = 16/91 (17%)
Query: 328 LKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNSSTLESLCENLPTK 387
L+ F D D +G ++ +E+ + + M+ E +T E + +
Sbjct: 101 LRWAFKLYDLDNDGYITRNEMLDIVDAIYQMVGNTVELPEEE-----NTPEKRVDRI--- 152
Query: 388 EKQKLMEKFREMDTDNSDTLTLSELKAGLAK 418
F MD + LTL E + G
Sbjct: 153 --------FAMMDKNADGKLTLQEFQEGSKA 175
|
| >3a4u_B Multiple coagulation factor deficiency protein 2; lectin, ergic, ER, golgi, transport, disulfide bond, endopla reticulum, ER-golgi transport; 1.84A {Homo sapiens} PDB: 2vrg_A 3lcp_C Length = 143 | Back alignment and structure |
|---|
Score = 48.4 bits (115), Expect = 4e-07
Identities = 18/79 (22%), Positives = 34/79 (43%), Gaps = 13/79 (16%)
Query: 411 ELKAGLAKLGSALEESEVN-QYMEAGDIDGNGNIDSIEFVNLMTDIYKLETPE------- 462
L+ + K + + E+ Y + D DGN +D +E +T ++K E E
Sbjct: 52 HLEGVINKPEAEMSPQELQLHYFKMHDYDGNNLLDGLELSTAITHVHKEEGSEQAPLMSE 111
Query: 463 -----LLEKAFQYLDKNSD 476
+++ + DKN+D
Sbjct: 112 DELINIIDGVLRDDDKNND 130
|
| >2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* Length = 314 | Back alignment and structure |
|---|
Score = 50.7 bits (122), Expect = 4e-07
Identities = 45/232 (19%), Positives = 79/232 (34%), Gaps = 57/232 (24%)
Query: 27 FGRMLGRGQFGVSYLCT-----ENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLS 81
G+ LG G+FG T + A K + K+ D++ E + +
Sbjct: 27 LGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKML-KENASPSELRDLLS-EFNVLKQV- 83
Query: 82 GQPNVVEFKSTYEDETAVHVVMELCEGGDLFD-----RIIAKGYNSERDAATVLRAIVN- 135
P+V++ + + +++E + G L R + GY +
Sbjct: 84 NHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPD 143
Query: 136 ------------AVNVCH------SMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLF 177
A + M ++HRDL N I + +K++DFG +
Sbjct: 144 ERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARN---ILVAEGRKMKISDFGLS--- 197
Query: 178 EEGQVYRDIVGSGFY------------IAPEVLR-RRYGKEIDIWSAGVILY 216
RD+ Y +A E L Y + D+WS GV+L+
Sbjct: 198 ------RDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLW 243
|
| >1s1e_A KV channel interacting protein 1; kchip, calcium-binding protein, EF-finger, transport protein; 2.30A {Homo sapiens} SCOP: a.39.1.5 Length = 224 | Back alignment and structure |
|---|
Score = 49.2 bits (117), Expect = 7e-07
Identities = 27/204 (13%), Positives = 58/204 (28%), Gaps = 31/204 (15%)
Query: 292 DTSVILRMKQFRRMNKLKKLTIKVIVEYLPDEETQALKEKFIEMDTDKNGTLSYDELRAG 351
+ ++ ++ + L E Q L F + +G ++ + +
Sbjct: 20 KDKIEDELEMTMVCHRPEGLEQLEAQTNFTKRELQVLYRGF--KNECPSGVVNEETFKQI 77
Query: 352 LTKVGSMLTE----------FDVKHLMEAVKNSSTLESLCENLPTKEKQKLMEKFREMDT 401
+ FD VK + +L L +KL F D
Sbjct: 78 YAQFFPHGDASTYAHYLFNAFDTTQTGS-VKFEDFVTALSILLRGTVHEKLRWTFNLYDI 136
Query: 402 DNSDTLTLSEL----KAGLAKLGSALEESE--------VNQYMEAGDIDGNGNIDSIEFV 449
+ + E+ KA +G V+ + + D + +G + EF+
Sbjct: 137 NKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGIVTLDEFL 196
Query: 450 NLMTDIYKLETPELLEKAFQYLDK 473
E ++ ++ Q
Sbjct: 197 ESC-----QEDDNIM-RSLQLFQN 214
|
| >2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307 | Back alignment and structure |
|---|
Score = 48.3 bits (116), Expect = 3e-06
Identities = 40/164 (24%), Positives = 65/164 (39%), Gaps = 37/164 (22%)
Query: 141 HSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQ---VYRDIVGSGFYIAPEV 197
H +HRD+K N I D+ K++DFG A E+ + IVG+ Y+APE
Sbjct: 150 HENHHIHRDIKSAN---ILLDEAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEA 206
Query: 198 LRRRYGKEIDIWSAGVILYILLSGVPPF-----------WAE---TKKGTYDAILQGEID 243
LR + DI+S GV+L +++G+P E ++ T + ID
Sbjct: 207 LRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDEEKTIEDY----ID 262
Query: 244 FDTDPWPSISSTAKDLVRRM-------LTKDPKRRITAAQVLEH 280
++ V M L + +R +V +
Sbjct: 263 ------KKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQL 300
|
| >3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359 | Back alignment and structure |
|---|
Score = 46.8 bits (111), Expect = 8e-06
Identities = 21/91 (23%), Positives = 40/91 (43%), Gaps = 4/91 (4%)
Query: 27 FGRMLGRGQFGVSYLCTENSTNRPYACKSIAKK---PKMRLAENDMIRREIQIRLYLSGQ 83
G+ LGRG FG ++ C+++A K +E+ + E++I +++
Sbjct: 26 LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 85
Query: 84 PNVVEFKSTYEDETA-VHVVMELCEGGDLFD 113
NVV + V++E C+ G+L
Sbjct: 86 LNVVNLLGACTKPGGPLMVIVEFCKFGNLST 116
|
| >3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359 | Back alignment and structure |
|---|
Score = 44.5 bits (105), Expect = 5e-05
Identities = 27/88 (30%), Positives = 40/88 (45%), Gaps = 8/88 (9%)
Query: 142 SMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYI---APEVL 198
S +HRDL N I + ++K+ DFG A + Y + + APE +
Sbjct: 211 SRKCIHRDLAARN---ILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETI 267
Query: 199 R-RRYGKEIDIWSAGVILY-ILLSGVPP 224
R Y + D+WS GV+L+ I G P
Sbjct: 268 FDRVYTIQSDVWSFGVLLWEIFSLGASP 295
|
| >3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326 | Back alignment and structure |
|---|
Score = 46.0 bits (110), Expect = 1e-05
Identities = 28/84 (33%), Positives = 41/84 (48%), Gaps = 6/84 (7%)
Query: 145 VMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQ--VYRDIVGSGFYIAPEVLRRRY 202
++HRD+K N I D+ V DFG A L + V + G+ +IAPE L
Sbjct: 155 IIHRDVKAAN---ILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGK 211
Query: 203 GKE-IDIWSAGVILYILLSGVPPF 225
E D++ GV+L L++G F
Sbjct: 212 SSEKTDVFGYGVMLLELITGQRAF 235
|
| >1qjt_A EH1, epidermal growth factor receptor substrate substrate 15, EPS15; EH domain, EF-hand, solution structure, S100 protein; NMR {Mus musculus} SCOP: a.39.1.6 Length = 99 | Back alignment and structure |
|---|
Score = 42.9 bits (101), Expect = 2e-05
Identities = 13/70 (18%), Positives = 28/70 (40%), Gaps = 2/70 (2%)
Query: 383 NLPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGN 442
+ + +R+++ N+ + + A L K S L + + + + D DG G
Sbjct: 4 TQLSSGNPVYEKYYRQVEAGNTGRVLALDAAAFLKK--SGLPDLILGKIWDLADTDGKGV 61
Query: 443 IDSIEFVNLM 452
+ EF +
Sbjct: 62 LSKQEFFVAL 71
|
| >2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A Length = 336 | Back alignment and structure |
|---|
Score = 44.9 bits (105), Expect = 3e-05
Identities = 36/248 (14%), Positives = 70/248 (28%), Gaps = 61/248 (24%)
Query: 25 YFFGRMLGRGQFGVSYLCTENSTNRPYACKSIA------------KKPKMRLAENDMIRR 72
+G G FG + + + P A K IA K + L E + +
Sbjct: 22 LQRCEKIGEGVFGEVFQTI--ADHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKE 79
Query: 73 EIQIRLYLSGQ-PNVVEFKSTY------------------------------EDETAVHV 101
+ + + + S + + + +
Sbjct: 80 LSLLSGEVCNRTEGFIGLNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFI 139
Query: 102 VMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCH-SMGVMHRDLKPENFSFISR 160
V+E GG +++ K +S A ++L + ++ V S+ HRDL N +
Sbjct: 140 VLEFEFGGIDLEQMRTK-LSSLATAKSILHQLTASLAVAEASLRFEHRDLHWGN---VLL 195
Query: 161 DDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLRRRYGKEIDIWSAGVILYILLS 220
+L K+ + I G +V Y V+ +
Sbjct: 196 KKTSLKKLHYTLNGKSS-------TIPSCGL----QVSIIDYTLSRLERDGIVVFCDVSM 244
Query: 221 GVPPFWAE 228
F +
Sbjct: 245 DEDLFTGD 252
|
| >3fia_A Intersectin-1; EH 1 domain, NESG, structural genomics, PSI- 2, protein structure initiative, northeast structural genomics consortium; 1.45A {Homo sapiens} PDB: 2khn_A Length = 121 | Back alignment and structure |
|---|
Score = 41.4 bits (97), Expect = 8e-05
Identities = 14/69 (20%), Positives = 31/69 (44%), Gaps = 3/69 (4%)
Query: 384 LPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNI 443
+ +E+ K ++F + S +T + + + S L + + Q D++ +G +
Sbjct: 27 ITVEERAKHDQQFHSLK-PISGFITGDQARNFFFQ--SGLPQPVLAQIWALADMNNDGRM 83
Query: 444 DSIEFVNLM 452
D +EF M
Sbjct: 84 DQVEFSIAM 92
|
| >2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321 | Back alignment and structure |
|---|
Score = 43.3 bits (103), Expect = 9e-05
Identities = 32/128 (25%), Positives = 54/128 (42%), Gaps = 26/128 (20%)
Query: 141 HSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLF---EEGQVYRDIVGSGFYIAPEV 197
H+ ++HRD+K N I D+N + K+TDFG + ++ + + G+ YI PE
Sbjct: 156 HTRAIIHRDVKSIN---ILLDENFVPKITDFGISKKGTELDQTHLSTVVKGTLGYIDPEY 212
Query: 198 LRRRYGKE-IDIWSAGVILYILLSGVPPF-------------WAET--KKGTYDAI---- 237
+ E D++S GV+L+ +L WA G + I
Sbjct: 213 FIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPN 272
Query: 238 LQGEIDFD 245
L +I +
Sbjct: 273 LADKIRPE 280
|
| >1qxp_A MU-like calpain; M-calpain, MU-calpain, catalytic triad, Ca(2+) requirement, hydrolase chimera; 2.80A {Rattus norvegicus} SCOP: a.39.1.8 a.39.1.8 b.14.1.1 d.3.1.3 Length = 900 | Back alignment and structure |
|---|
Score = 44.0 bits (103), Expect = 9e-05
Identities = 33/171 (19%), Positives = 65/171 (38%), Gaps = 28/171 (16%)
Query: 321 PDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHL-MEAVK------- 372
EE + ++ F+++ + +S EL L KV + + ++ +
Sbjct: 726 ESEEERQFRKLFVQLA-GDDMEVSATELMNILNKVVTRHPDLKTDGFGIDTCRSMVAVMD 784
Query: 373 --NSSTLE-----SLCENLPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEE 425
+ L L N+ +K ++ +TD S T+ +EL G L
Sbjct: 785 SDTTGKLGFEEFKYLWNNI-----KKWQGIYKRFETDRSGTIGSNELPGAFEAAGFHL-N 838
Query: 426 SEVNQYMEAGDIDGNGNIDSIEFVNLMTDIYKLETPELLEKAFQYLDKNSD 476
+ + D GN+D F++ + +L+ + +AF+ LDKN
Sbjct: 839 QHIYSMIIRRYSDETGNMDFDNFISCLV---RLDA---MFRAFRSLDKNGT 883
|
| >3nxa_A Protein S100-A16; S100 family, calcium binding protein, APO, EF-hand calcium binding proteins, S100 proteins, protein dynamics, binding protein; 2.10A {Homo sapiens} PDB: 2l0u_A 2l0v_A 2l50_A 2l51_A Length = 100 | Back alignment and structure |
|---|
Score = 40.2 bits (94), Expect = 1e-04
Identities = 11/66 (16%), Positives = 25/66 (37%), Gaps = 5/66 (7%)
Query: 395 KFREMDTDNSDTLTLSELKAGLAK-----LGSALEESEVNQYMEAGDIDGNGNIDSIEFV 449
K+ + + ++ S + L K L ++ ++ D + +G I E+
Sbjct: 19 KYVSKYSLVKNKISKSSFREMLQKELNHMLSDTGNRKAADKLIQNLDANHDGRISFDEYW 78
Query: 450 NLMTDI 455
L+ I
Sbjct: 79 TLIGGI 84
|
| >2l4h_A Calcium and integrin-binding protein 1; metal binding protei; NMR {Homo sapiens} PDB: 2l4i_A 2lm5_A Length = 214 | Back alignment and structure |
|---|
Score = 42.2 bits (99), Expect = 1e-04
Identities = 12/56 (21%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Query: 308 LKKLTIKVIVEYLPDEETQALKEK-FIEMDTDKNGTLSYDELRAGLTKVGSMLTEF 362
+ LT + L E + L + E D D++GT++ E + +++ + F
Sbjct: 155 VNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINLSEFQHVISRSPDFASSF 210
|
| >1xk4_A Calgranulin A; S100 family, heterotetramer, metal binding protein; HET: FLC; 1.80A {Homo sapiens} SCOP: a.39.1.2 PDB: 1mr8_A Length = 93 | Back alignment and structure |
|---|
Score = 39.8 bits (93), Expect = 2e-04
Identities = 10/55 (18%), Positives = 24/55 (43%), Gaps = 1/55 (1%)
Query: 402 DNSDTLTLSELKAGLAK-LGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDI 455
N + +LK L + + + + + DI+ +G ++ EF+ L+ +
Sbjct: 24 GNFHAVYRDDLKKLLETESPQYIRKKGADVWFKELDINTDGAVNFQEFLILVIKM 78
|
| >1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A Length = 624 | Back alignment and structure |
|---|
Score = 42.2 bits (98), Expect = 3e-04
Identities = 13/89 (14%), Positives = 35/89 (39%), Gaps = 5/89 (5%)
Query: 383 NLPTKEKQK--LMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGN 440
++ ++K + + R+ D + + + ELK L +L +++ + D
Sbjct: 2 SMDQRQKLQHWIHSCLRKADKNKDNKMNFKELKDFLKELNIQVDDGYARKIFRECDHSQT 61
Query: 441 GNIDSIEFVNLMTDIYKLETPELLEKAFQ 469
+++ E L +++AF+
Sbjct: 62 DSLEDEEIETF---YKMLTQRAEIDRAFE 87
|
| >1dgu_A Calcium-saturated CIB; helical, EF-hands, blood clotting; NMR {Homo sapiens} SCOP: a.39.1.5 PDB: 1dgv_A 1xo5_A 1y1a_A* Length = 183 | Back alignment and structure |
|---|
Score = 40.1 bits (94), Expect = 5e-04
Identities = 12/58 (20%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
Query: 308 LKKLTIKVIVEYLPDEETQALKEK-FIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDV 364
+ LT + L E + L + E D D++GT++ E + +++ + F +
Sbjct: 124 VNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINLSEFQHVISRSPDFASSFKI 181
|
| >2lnk_A Protein S100-A4; EF-hand, calcium binding, all alpha, metal binding protein, binding protein; NMR {Homo sapiens} PDB: 3c1v_A Length = 113 | Back alignment and structure |
|---|
Score = 38.8 bits (90), Expect = 5e-04
Identities = 14/61 (22%), Positives = 25/61 (40%), Gaps = 5/61 (8%)
Query: 400 DTDNSDTLTLSELKAGLAK-----LGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTD 454
+ L SELK L + LG +E+ + M D + + +D E+ ++
Sbjct: 34 KEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVFLSC 93
Query: 455 I 455
I
Sbjct: 94 I 94
|
| >4eto_A Protein S100-A4; calcium-binding protein, EF-hand, structural genomics, PSI-B protein structure initiative, NEW YORK structural genomics consortium; 1.54A {Homo sapiens} PDB: 1m31_A 2q91_A 3cga_A 3ko0_A* 3m0w_A* Length = 93 | Back alignment and structure |
|---|
Score = 37.9 bits (88), Expect = 8e-04
Identities = 14/59 (23%), Positives = 25/59 (42%), Gaps = 5/59 (8%)
Query: 402 DNSDTLTLSELKAGLAK-----LGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDI 455
+ L SELK L + LG +E+ + M D + + +D E+ ++ I
Sbjct: 24 GDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVFLSCI 82
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 477 | |||
| 3nyv_A | 484 | Calmodulin-domain protein kinase 1; serine/threoni | 100.0 | |
| 3q5i_A | 504 | Protein kinase; CDPK, malaria, phosphotransferase, | 100.0 | |
| 3lij_A | 494 | Calcium/calmodulin dependent protein kinase with A | 100.0 | |
| 3mwu_A | 486 | Calmodulin-domain protein kinase 1; serine/threoni | 100.0 | |
| 4aw0_A | 311 | HPDK1, 3-phosphoinositide-dependent protein kinase | 100.0 | |
| 3hyh_A | 275 | Carbon catabolite-derepressing protein kinase; kin | 100.0 | |
| 4fih_A | 346 | Serine/threonine-protein kinase PAK 4; kinase doma | 100.0 | |
| 4b9d_A | 350 | Serine/threonine-protein kinase NEK1; transferase, | 100.0 | |
| 3fpq_A | 290 | Serine/threonine-protein kinase WNK1; protein seri | 100.0 | |
| 3ubd_A | 304 | Ribosomal protein S6 kinase alpha-3; kinase-inhibi | 100.0 | |
| 4fie_A | 423 | Serine/threonine-protein kinase PAK 4; kinase doma | 100.0 | |
| 4g3f_A | 336 | NF-kappa-beta-inducing kinase; non-RD kinase, prot | 100.0 | |
| 4b99_A | 398 | Mitogen-activated protein kinase 7; transferase, i | 100.0 | |
| 4f9c_A | 361 | Cell division cycle 7-related protein kinase; Ser/ | 100.0 | |
| 3uto_A | 573 | Twitchin; kinase, muscle sarcomere, transferase; H | 100.0 | |
| 4g31_A | 299 | Eukaryotic translation initiation factor 2-alpha; | 100.0 | |
| 3v5w_A | 689 | G-protein coupled receptor kinase 2; inhibitor com | 100.0 | |
| 4asz_A | 299 | BDNF/NT-3 growth factors receptor; transferase, TR | 100.0 | |
| 3omv_A | 307 | RAF proto-oncogene serine/threonine-protein kinas; | 100.0 | |
| 4aoj_A | 329 | High affinity nerve growth factor receptor; transf | 100.0 | |
| 2bdw_A | 362 | Hypothetical protein K11E8.1D; kinase, calmodulin | 100.0 | |
| 3soa_A | 444 | Calcium/calmodulin-dependent protein kinase type a | 100.0 | |
| 4gt4_A | 308 | Tyrosine-protein kinase transmembrane receptor RO; | 100.0 | |
| 4ase_A | 353 | Vascular endothelial growth factor receptor 2; tra | 100.0 | |
| 2yab_A | 361 | Death-associated protein kinase 2; apoptosis, tran | 100.0 | |
| 1tki_A | 321 | Titin; serine kinase, muscle, autoinhibition; 2.00 | 100.0 | |
| 3fe3_A | 328 | MAP/microtubule affinity-regulating kinase 3; seri | 100.0 | |
| 3txo_A | 353 | PKC-L, NPKC-ETA, protein kinase C ETA type; phosph | 100.0 | |
| 3zgw_A | 347 | Maternal embryonic leucine zipper kinase; transfer | 100.0 | |
| 3c0i_A | 351 | Peripheral plasma membrane protein CASK; neurexin, | 100.0 | |
| 2w4o_A | 349 | Calcium/calmodulin-dependent protein kinase type I | 100.0 | |
| 2y0a_A | 326 | Death-associated protein kinase 1; transferase, ca | 100.0 | |
| 1o6l_A | 337 | RAC-beta serine/threonine protein kinase; protein | 100.0 | |
| 3uc3_A | 361 | Serine/threonine-protein kinase SRK2I; SNRK2, ABA | 100.0 | |
| 4dc2_A | 396 | Protein kinase C IOTA type; kinase, substrate, cel | 100.0 | |
| 1xjd_A | 345 | Protein kinase C, theta type; PKC-theta, ATP, AMP, | 100.0 | |
| 2qr7_A | 342 | Ribosomal protein S6 kinase alpha-3; kinase domain | 100.0 | |
| 3fxz_A | 297 | Serine/threonine-protein kinase PAK 1; transferase | 100.0 | |
| 3f3z_A | 277 | Calcium/calmodulin-dependent protein kinase with d | 100.0 | |
| 3a8x_A | 345 | Protein kinase C IOTA type; transferase; HET: TPO; | 100.0 | |
| 1fot_A | 318 | TPK1 delta, CAMP-dependent protein kinase type 1; | 100.0 | |
| 3kk8_A | 284 | Calcium/calmodulin dependent protein kinase II; AT | 100.0 | |
| 3v8s_A | 410 | RHO-associated protein kinase 1; dimerization, myo | 100.0 | |
| 2i0e_A | 353 | Protein kinase C-beta II; serine/threonine protein | 100.0 | |
| 4fr4_A | 384 | YANK1, serine/threonine-protein kinase 32A; struct | 100.0 | |
| 3h4j_B | 336 | AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin | 100.0 | |
| 1kob_A | 387 | Twitchin; kinase, intrasteric regulation; 2.30A {A | 100.0 | |
| 3hmm_A | 303 | TGF-beta receptor type-1; ALK5, kinase, inhibitor, | 100.0 | |
| 1rdq_E | 350 | PKA C-alpha, CAMP-dependent protein kinase, alpha- | 100.0 | |
| 3is5_A | 285 | Calcium-dependent protein kinase; CDPK, structural | 100.0 | |
| 2eue_A | 275 | Carbon catabolite derepressing protein kinase; kin | 100.0 | |
| 3kn6_A | 325 | Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1 | 100.0 | |
| 2ac3_A | 316 | MAP kinase-interacting serine/threonine kinase 2; | 100.0 | |
| 4aw2_A | 437 | Serine/threonine-protein kinase MRCK alpha; transf | 100.0 | |
| 2a2a_A | 321 | Death-associated protein kinase 2; autoinhibition, | 100.0 | |
| 2r5t_A | 373 | Serine/threonine-protein kinase SGK1; AGC protein | 100.0 | |
| 3lm5_A | 327 | Serine/threonine-protein kinase 17B; STK17B, serin | 100.0 | |
| 2y7j_A | 365 | Phosphorylase B kinase gamma catalytic chain, test | 100.0 | |
| 1nxk_A | 400 | MAP kinase-activated protein kinase 2; MK2, phosph | 100.0 | |
| 2vd5_A | 412 | DMPK protein; serine/threonine-protein kinase, kin | 100.0 | |
| 2y94_A | 476 | 5'-AMP-activated protein kinase catalytic subunit; | 100.0 | |
| 3o0g_A | 292 | Cell division protein kinase 5; kinase activator c | 100.0 | |
| 3niz_A | 311 | Rhodanese family protein; structural genomics, str | 100.0 | |
| 1phk_A | 298 | Phosphorylase kinase; glycogen metabolism, transfe | 100.0 | |
| 3g33_A | 308 | Cell division protein kinase 4; Ser/Thr protein ki | 100.0 | |
| 2x4f_A | 373 | Myosin light chain kinase family member 4; LUNG, b | 100.0 | |
| 3oz6_A | 388 | Mitogen-activated protein kinase 1, serine/threon | 100.0 | |
| 2jam_A | 304 | Calcium/calmodulin-dependent protein kinase type 1 | 100.0 | |
| 2wei_A | 287 | Calmodulin-domain protein kinase 1, putative; nucl | 100.0 | |
| 3a62_A | 327 | Ribosomal protein S6 kinase beta-1; kinase domain, | 100.0 | |
| 3tki_A | 323 | Serine/threonine-protein kinase CHK1; cell checkpo | 100.0 | |
| 2acx_A | 576 | G protein-coupled receptor kinase 6; GRK, G transf | 100.0 | |
| 3gbz_A | 329 | Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide- | 100.0 | |
| 4ejn_A | 446 | RAC-alpha serine/threonine-protein kinase; AKT1, a | 100.0 | |
| 2pmi_A | 317 | Negative RE, cyclin-dependent protein kinase PHO85 | 100.0 | |
| 1ob3_A | 288 | PFPK5, cell division control protein 2 homolog; tr | 100.0 | |
| 3i6u_A | 419 | CDS1, serine/threonine-protein kinase CHK2; Ser/Th | 100.0 | |
| 3fdn_A | 279 | Serine/threonine-protein kinase 6; aurora kinase i | 100.0 | |
| 3bhy_A | 283 | Death-associated protein kinase 3; death associate | 100.0 | |
| 4agu_A | 311 | Cyclin-dependent kinase-like 1; transferase, phosp | 100.0 | |
| 2zv2_A | 298 | Calcium/calmodulin-dependent protein kinase kinas; | 100.0 | |
| 3gni_B | 389 | Strad alpha; kinase fold, pseudokinase, alpha heli | 100.0 | |
| 3hko_A | 345 | Calcium/calmodulin-dependent protein kinase with d | 100.0 | |
| 3ttj_A | 464 | Mitogen-activated protein kinase 10; JNK3, protein | 100.0 | |
| 3p1a_A | 311 | MYT1 kinase, membrane-associated tyrosine- and thr | 100.0 | |
| 1u5q_A | 348 | Serine/threonine protein kinase TAO2; transferase; | 100.0 | |
| 2ycf_A | 322 | Serine/threonine-protein kinase CHK2; transferase, | 100.0 | |
| 3pfq_A | 674 | PKC-B, PKC-beta, protein kinase C beta type; phosp | 100.0 | |
| 3rp9_A | 458 | Mitogen-activated protein kinase; structural genom | 100.0 | |
| 3mi9_A | 351 | Cell division protein kinase 9; P-TEFB, HIV-1, pro | 100.0 | |
| 1cm8_A | 367 | Phosphorylated MAP kinase P38-gamma; phosphorylati | 100.0 | |
| 2h6d_A | 276 | 5'-AMP-activated protein kinase catalytic subunit | 100.0 | |
| 2vgo_A | 284 | Serine/threonine-protein kinase 12-A; nucleotide-b | 100.0 | |
| 3llt_A | 360 | Serine/threonine kinase-1, pflammer; lammer kinase | 100.0 | |
| 3c4z_A | 543 | Rhodopsin kinase; Ser/Thr kinase, RGS homology dom | 100.0 | |
| 3ork_A | 311 | Serine/threonine protein kinase; structural genomi | 100.0 | |
| 2zmd_A | 390 | Dual specificity protein kinase TTK; MPS1, T686A, | 100.0 | |
| 2rku_A | 294 | Serine/threonine-protein kinase PLK1; structure of | 100.0 | |
| 4eqm_A | 294 | Protein kinase; transferase; HET: ANP; 3.00A {Stap | 100.0 | |
| 3mtl_A | 324 | Cell division protein kinase 16; pctaire1, indirub | 100.0 | |
| 3n9x_A | 432 | Phosphotransferase; malaria kinase, structural gen | 100.0 | |
| 3dls_A | 335 | PAS domain-containing serine/threonine-protein KI; | 100.0 | |
| 2owb_A | 335 | Serine/threonine-protein kinase PLK1; catalytic do | 100.0 | |
| 4e7w_A | 394 | Glycogen synthase kinase 3; GSK3, PTyr195, transfe | 100.0 | |
| 2c30_A | 321 | Serine/threonine-protein kinase PAK 6; CRIB domain | 100.0 | |
| 4aaa_A | 331 | Cyclin-dependent kinase-like 2; transferase, phosp | 100.0 | |
| 1t4h_A | 290 | Serine/threonine-protein kinase WNK1; protein seri | 100.0 | |
| 2xrw_A | 371 | Mitogen-activated protein kinase 8; transcription, | 100.0 | |
| 3cok_A | 278 | Serine/threonine-protein kinase PLK4; POLO-like ki | 100.0 | |
| 1x8b_A | 289 | WEE1HU, WEE1-like protein kinase; cell cycle, tran | 100.0 | |
| 1ua2_A | 346 | CAK, cell division protein kinase 7; cell cycle, p | 100.0 | |
| 3eb0_A | 383 | Putative uncharacterized protein; kinase cryptospo | 100.0 | |
| 3fhr_A | 336 | MAP kinase-activated protein kinase 3; kinase-inhi | 100.0 | |
| 1vzo_A | 355 | Ribosomal protein S6 kinase alpha 5; protein kinas | 100.0 | |
| 2fst_X | 367 | Mitogen-activated protein kinase 14; active mutant | 100.0 | |
| 3fme_A | 290 | Dual specificity mitogen-activated protein kinase; | 100.0 | |
| 2x7f_A | 326 | TRAF2 and NCK-interacting protein kinase; serine/t | 100.0 | |
| 3dbq_A | 343 | Dual specificity protein kinase TTK; MPS1 structur | 100.0 | |
| 3qd2_B | 332 | Eukaryotic translation initiation factor 2-alpha; | 100.0 | |
| 2j7t_A | 302 | Serine/threonine-protein kinase 10; transferase, A | 100.0 | |
| 3byv_A | 377 | Rhoptry kinase; malaria, transferase, structural g | 100.0 | |
| 3kvw_A | 429 | DYRK2, dual specificity tyrosine-phosphorylation-r | 100.0 | |
| 2yex_A | 276 | Serine/threonine-protein kinase CHK1; transferase, | 100.0 | |
| 3a7i_A | 303 | MST3 kinase, serine/threonine kinase 24 (STE20 hom | 100.0 | |
| 4euu_A | 319 | Serine/threonine-protein kinase TBK1; ATP binding, | 100.0 | |
| 3qyz_A | 364 | Mitogen-activated protein kinase 1; transferase, s | 100.0 | |
| 3nsz_A | 330 | CK II alpha, casein kinase II subunit alpha; inhib | 100.0 | |
| 2r3i_A | 299 | Cell division protein kinase 2; serine/threonine-p | 100.0 | |
| 3rgf_A | 405 | Cyclin-dependent kinase 8; protein kinase complex, | 100.0 | |
| 3eqc_A | 360 | Dual specificity mitogen-activated protein kinase; | 100.0 | |
| 1j1b_A | 420 | Glycogen synthase kinase-3 beta; complex, TAU, AMP | 100.0 | |
| 3q60_A | 371 | ROP5B; pseudokinase, transferase; HET: ATP; 1.72A | 100.0 | |
| 3com_A | 314 | Serine/threonine-protein kinase 4; MST1, STE20-lik | 100.0 | |
| 4exu_A | 371 | Mitogen-activated protein kinase 13; P38 kinase, t | 100.0 | |
| 3an0_A | 340 | Dual specificity mitogen-activated protein kinase; | 100.0 | |
| 2vwi_A | 303 | Serine/threonine-protein kinase OSR1; STE kinase, | 100.0 | |
| 3p86_A | 309 | Serine/threonine-protein kinase CTR1; ETR1, ERS1, | 100.0 | |
| 2vx3_A | 382 | Dual specificity tyrosine-phosphorylation- regula | 100.0 | |
| 2wtk_C | 305 | Serine/threonine-protein kinase 11; transferase-me | 100.0 | |
| 1blx_A | 326 | Cyclin-dependent kinase 6; inhibitor protein, cycl | 100.0 | |
| 1zy4_A | 303 | Serine/threonine-protein kinase GCN2; translation | 100.0 | |
| 2pml_X | 348 | PFPK7, Ser/Thr protein kinase; phosphorylati trans | 100.0 | |
| 2b9h_A | 353 | MAP kinase FUS3, mitogen-activated protein kinase | 100.0 | |
| 2w5a_A | 279 | Serine/threonine-protein kinase NEK2; Ser/Thr prot | 100.0 | |
| 2psq_A | 370 | Fibroblast growth factor receptor 2; kinase domain | 100.0 | |
| 3vhe_A | 359 | Vascular endothelial growth factor receptor 2; kin | 100.0 | |
| 3qup_A | 323 | Tyrosine-protein kinase receptor TYRO3; protein ki | 100.0 | |
| 3e3p_A | 360 | Protein kinase, putative glycogen synthase kinase; | 100.0 | |
| 3l9p_A | 367 | Anaplastic lymphoma kinase; kinase domain, ATP-bin | 100.0 | |
| 2i6l_A | 320 | Mitogen-activated protein kinase 6; MAPK6, ERK3, e | 100.0 | |
| 3a99_A | 320 | Proto-oncogene serine/threonine-protein kinase PI; | 100.0 | |
| 1z57_A | 339 | Dual specificity protein kinase CLK1; protein tyro | 100.0 | |
| 3coi_A | 353 | Mitogen-activated protein kinase 13; P38D, P38delt | 100.0 | |
| 1wak_A | 397 | Serine/threonine-protein kinase SPRK1; SRPK, trans | 100.0 | |
| 3pg1_A | 362 | Mitogen-activated protein kinase, putative (MAP K | 100.0 | |
| 3kul_A | 325 | Ephrin type-A receptor 8; ATP-binding, kinase, nuc | 100.0 | |
| 2dyl_A | 318 | Dual specificity mitogen-activated protein kinase | 100.0 | |
| 3tt0_A | 382 | Basic fibroblast growth factor receptor 1; kinase | 100.0 | |
| 2clq_A | 295 | Mitogen-activated protein kinase kinase kinase 5; | 100.0 | |
| 2h34_A | 309 | Serine/threonine-protein kinase PKNE; apoenzyme, t | 100.0 | |
| 3sxs_A | 268 | Cytoplasmic tyrosine-protein kinase BMX; transfera | 100.0 | |
| 3cek_A | 313 | Dual specificity protein kinase TTK; HMPS1, PYT, E | 100.0 | |
| 3aln_A | 327 | Dual specificity mitogen-activated protein kinase; | 100.0 | |
| 3gen_A | 283 | Tyrosine-protein kinase BTK; bruton'S tyrosine kin | 100.0 | |
| 4hcu_A | 269 | Tyrosine-protein kinase ITK/TSK; transferase-trans | 100.0 | |
| 3s95_A | 310 | LIMK-1, LIM domain kinase 1; structural genomics, | 100.0 | |
| 4f0f_A | 287 | Serine/threonine-protein kinase ROCO4; LRRK2, ATP- | 100.0 | |
| 2ivs_A | 314 | Proto-oncogene tyrosine-protein kinase receptor RE | 100.0 | |
| 3cbl_A | 377 | C-FES, proto-oncogene tyrosine-protein kinase FES/ | 100.0 | |
| 2izr_A | 330 | Casein kinase I isoform gamma-3; serine/threonine- | 100.0 | |
| 1mp8_A | 281 | Focal adhesion kinase 1; tyrosine protein kinase, | 100.0 | |
| 2eu9_A | 355 | Dual specificity protein kinase CLK3; kinase domai | 100.0 | |
| 1csn_A | 298 | Casein kinase-1; phosphotransferase; HET: ATP; 2.0 | 100.0 | |
| 3dtc_A | 271 | Mitogen-activated protein kinase kinase kinase 9; | 100.0 | |
| 1luf_A | 343 | Muscle-specific tyrosine kinase receptor MUSK; pho | 100.0 | |
| 3lb7_A | 307 | RAF proto-oncogene serine/threonine-protein kinas; | 100.0 | |
| 1rjb_A | 344 | FL cytokine receptor; kinase, structure, autoinhib | 100.0 | |
| 1t46_A | 313 | HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom | 100.0 | |
| 3kfa_A | 288 | Tyrosine-protein kinase ABL1; CML, drug resistance | 100.0 | |
| 3p23_A | 432 | Serine/threonine-protein kinase/endoribonuclease; | 100.0 | |
| 2iwi_A | 312 | Serine/threonine-protein kinase PIM-2; nucleotide- | 100.0 | |
| 1p4o_A | 322 | Insulin-like growth factor I receptor protein; IGF | 100.0 | |
| 1fvr_A | 327 | Tyrosine-protein kinase TIE-2; tyrosine kinase, tr | 100.0 | |
| 2wqm_A | 310 | Serine/threonine-protein kinase NEK7; ATP-binding, | 100.0 | |
| 2pvf_A | 334 | Fibroblast growth factor receptor 2; kinase domain | 100.0 | |
| 4eut_A | 396 | Serine/threonine-protein kinase TBK1; ATP binding, | 100.0 | |
| 2yfx_A | 327 | Tyrosine-protein kinase receptor; nucleotide-bindi | 100.0 | |
| 4fvq_A | 289 | Tyrosine-protein kinase JAK2; janus protein kinase | 100.0 | |
| 3ugc_A | 295 | Tyrosine-protein kinase JAK2; small molecule inhib | 100.0 | |
| 1q8y_A | 373 | SR protein kinase; transferase; HET: ADP ADE; 2.05 | 100.0 | |
| 2xir_A | 316 | Vascular endothelial growth factor receptor 2; ang | 100.0 | |
| 3poz_A | 327 | Epidermal growth factor receptor; kinase domain, a | 100.0 | |
| 1byg_A | 278 | CSK, protein (C-terminal SRC kinase); protein kina | 100.0 | |
| 3m2w_A | 299 | MAP kinase-activated protein kinase 2; small molec | 100.0 | |
| 2rio_A | 434 | Serine/threonine-protein kinase/endoribonuclease I | 100.0 | |
| 2i1m_A | 333 | Macrophage colony-stimulating factor 1 receptor; k | 100.0 | |
| 2qol_A | 373 | Ephrin receptor; receptor tyrosine kinase, juxtame | 100.0 | |
| 2a19_B | 284 | Interferon-induced, double-stranded RNA-activated | 100.0 | |
| 3t9t_A | 267 | Tyrosine-protein kinase ITK/TSK; kinase domain, al | 100.0 | |
| 3kex_A | 325 | Receptor tyrosine-protein kinase ERBB-3; kinase do | 100.0 | |
| 1qcf_A | 454 | Haematopoetic cell kinase (HCK); tyrosine kinase-i | 100.0 | |
| 1fmk_A | 452 | C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros | 100.0 | |
| 3kmu_A | 271 | ILK, integrin-linked kinase; cell adhesion, ANK re | 100.0 | |
| 3soc_A | 322 | Activin receptor type-2A; structural genomics cons | 100.0 | |
| 2buj_A | 317 | Serine/threonine-protein kinase 16; transferase, A | 100.0 | |
| 1xbb_A | 291 | Tyrosine-protein kinase SYK; gleevec, STI-571, ima | 100.0 | |
| 4e5w_A | 302 | Tyrosine-protein kinase JAK1; kinase domain, trans | 100.0 | |
| 1u59_A | 287 | Tyrosine-protein kinase ZAP-70; transferase; HET: | 100.0 | |
| 1k9a_A | 450 | Carboxyl-terminal SRC kinase; COOH-terminal SRC ki | 100.0 | |
| 3lzb_A | 327 | Epidermal growth factor receptor; epidermal growth | 100.0 | |
| 3cc6_A | 281 | Protein tyrosine kinase 2 beta; focal adhesion kin | 100.0 | |
| 3uzp_A | 296 | CKI-delta, CKID, casein kinase I isoform delta; CK | 100.0 | |
| 1opk_A | 495 | P150, C-ABL, proto-oncogene tyrosine-protein kinas | 100.0 | |
| 3og7_A | 289 | AKAP9-BRAF fusion protein; proto-oncogene, V600E, | 100.0 | |
| 3ll6_A | 337 | Cyclin G-associated kinase; transferase, protein k | 100.0 | |
| 3op5_A | 364 | Serine/threonine-protein kinase VRK1; adenosine tr | 100.0 | |
| 1mqb_A | 333 | Ephrin type-A receptor 2; tyrosine protein kinase, | 100.0 | |
| 2qkw_B | 321 | Protein kinase; three-helix bundle motif, AVRPTO-P | 100.0 | |
| 1qpc_A | 279 | LCK kinase; alpha beta fold, transferase; HET: PTR | 100.0 | |
| 1u46_A | 291 | ACK-1, activated CDC42 kinase 1; tyrosine kinase, | 100.0 | |
| 2v62_A | 345 | Serine/threonine-protein kinase VRK2; transferase, | 100.0 | |
| 3brb_A | 313 | Proto-oncogene tyrosine-protein kinase MER; ATP-bi | 100.0 | |
| 4hgt_A | 296 | Casein kinase I isoform delta; CK1D, inhibitor, tr | 100.0 | |
| 3lxl_A | 327 | Tyrosine-protein kinase JAK3; TYK2, inflammation, | 100.0 | |
| 3f66_A | 298 | Hepatocyte growth factor receptor; C-Met, protein | 100.0 | |
| 3q4u_A | 301 | Activin receptor type-1; structural genomics conso | 100.0 | |
| 3uim_A | 326 | Brassinosteroid insensitive 1-associated receptor; | 100.0 | |
| 2h8h_A | 535 | Proto-oncogene tyrosine-protein kinase SRC; SRC ki | 100.0 | |
| 2nru_A | 307 | Interleukin-1 receptor-associated kinase 4; inhibi | 100.0 | |
| 3pls_A | 298 | Macrophage-stimulating protein receptor; protein k | 100.0 | |
| 3qa8_A | 676 | MGC80376 protein; kinase ubiquitin-like domain, ph | 100.0 | |
| 3lxp_A | 318 | Non-receptor tyrosine-protein kinase TYK2; JAK3, i | 100.0 | |
| 3c1x_A | 373 | Hepatocyte growth factor receptor; receptor tyrosi | 100.0 | |
| 2jii_A | 352 | Serine/threonine-protein kinase VRK3 molecule: VA | 100.0 | |
| 3e7e_A | 365 | HBUB1, BUB1A, mitotic checkpoint serine/threonine- | 100.0 | |
| 4fl3_A | 635 | Tyrosine-protein kinase SYK; transferase; HET: ANP | 100.0 | |
| 3sv0_A | 483 | Casein kinase I-like; typical kinase domain fold, | 100.0 | |
| 2eva_A | 307 | TAK1 kinase - TAB1 chimera fusion protein; transfe | 100.0 | |
| 2y4i_B | 319 | KSR2, HKSR2, kinase suppressor of RAS 2; transfera | 100.0 | |
| 2vuw_A | 336 | Serine/threonine-protein kinase haspin; cell cycle | 100.0 | |
| 3mdy_A | 337 | Bone morphogenetic protein receptor type-1B; compl | 100.0 | |
| 1b6c_B | 342 | TGF-B superfamily receptor type I; complex (isomer | 100.0 | |
| 3g2f_A | 336 | Bone morphogenetic protein receptor type-2; kinase | 100.0 | |
| 2w1i_A | 326 | JAK2; chromosomal rearrangement, nucleotide-bindin | 100.0 | |
| 2ozo_A | 613 | Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t | 100.0 | |
| 3uqc_A | 286 | Probable conserved transmembrane protein; structur | 100.0 | |
| 2j0j_A | 656 | Focal adhesion kinase 1; cell migration, FERM, tra | 100.0 | |
| 3gxj_A | 303 | TGF-beta receptor type-1; ALK5, kinase, inhibitor, | 100.0 | |
| 3dzo_A | 413 | Rhoptry kinase domain; parasitic disease, transfer | 100.0 | |
| 2pzi_A | 681 | Probable serine/threonine-protein kinase PKNG; ATP | 100.0 | |
| 4azs_A | 569 | Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15 | 100.0 | |
| 3en9_A | 540 | Glycoprotease, O-sialoglycoprotein endopeptidase/p | 99.96 | |
| 1zar_A | 282 | RIO2 kinase; serine kinase, winged-helix, RIO doma | 99.93 | |
| 3i5g_B | 153 | Myosin regulatory light chain LC-2, mantle muscle; | 99.88 | |
| 3pm8_A | 197 | PFCDPK2, calcium-dependent protein kinase 2; malar | 99.88 | |
| 2lhi_A | 176 | Calmodulin, serine/threonine-protein phosphatase c | 99.88 | |
| 2lmt_A | 148 | Calmodulin-related protein 97A; spermatogenesis, m | 99.87 | |
| 3k21_A | 191 | PFCDPK3, calcium-dependent protein kinase 3; calci | 99.87 | |
| 1zth_A | 258 | RIO1 serine protein kinase; ribosome biogenesis, r | 99.86 | |
| 3sjs_A | 220 | URE3-BP sequence specific DNA binding protein; EF- | 99.86 | |
| 1ij5_A | 323 | Plasmodial specific LAV1-2 protein; fourty kDa cal | 99.85 | |
| 2znd_A | 172 | Programmed cell death protein 6; penta-EF-hand pro | 99.85 | |
| 1alv_A | 173 | Calpain, S-camld; calcium binding, calmodulin like | 99.85 | |
| 2obh_A | 143 | Centrin-2; DNA repair complex EF hand superfamily | 99.84 | |
| 3u0k_A | 440 | Rcamp; fluorescent protein, calcium binding, EF-ha | 99.84 | |
| 1y1x_A | 191 | Leishmania major homolog of programmed cell death | 99.84 | |
| 2i7a_A | 174 | Calpain 13; calcium-dependent cytoplasmic cysteine | 99.84 | |
| 3i5g_C | 159 | Myosin catalytic light chain LC-1, mantle muscle; | 99.84 | |
| 1exr_A | 148 | Calmodulin; high resolution, disorder, metal trans | 99.82 | |
| 2mys_B | 166 | Myosin; muscle protein, motor protein; HET: MLY; 2 | 99.82 | |
| 1k94_A | 165 | Grancalcin; penta-EF-hand protein, calcium binding | 99.82 | |
| 1gjy_A | 167 | Sorcin, CP-22, V19; calcium binding, calcium-bindi | 99.82 | |
| 1juo_A | 198 | Sorcin; calcium-binding proteins, penta-EF-hand, P | 99.81 | |
| 3mse_B | 180 | Calcium-dependent protein kinase, putative; CDPKS, | 99.8 | |
| 2f33_A | 263 | Calbindin; EF-hand, Ca2+-binding, metal binding pr | 99.8 | |
| 2ovk_B | 153 | RLC, myosin regulatory light chain LC-2, mantle mu | 99.8 | |
| 3j04_B | 143 | Myosin regulatory light chain 2, smooth muscle MA | 99.8 | |
| 3fwb_A | 161 | Cell division control protein 31; gene gating, com | 99.79 | |
| 3qrx_A | 169 | Centrin; calcium-binding, EF-hand, cell division, | 99.79 | |
| 3ox6_A | 153 | Calcium-binding protein 1; EF-hand, calcium-sensor | 99.79 | |
| 3khe_A | 191 | Calmodulin-like domain protein kinase isoform 3; c | 99.79 | |
| 1wdc_B | 156 | Scallop myosin; calcium binding protein, muscle pr | 99.79 | |
| 2f2o_A | 179 | Calmodulin fused with calmodulin-binding domain of | 99.79 | |
| 4ds7_A | 147 | Calmodulin, CAM; protein binding, metal binding, s | 99.79 | |
| 2ovk_C | 159 | Myosin catalytic light chain LC-1, mantle muscle, | 99.78 | |
| 2aao_A | 166 | CDPK, calcium-dependent protein kinase, isoform AK | 99.78 | |
| 2jnf_A | 158 | Troponin C; stretch activated muscle contraction, | 99.77 | |
| 1top_A | 162 | Troponin C; contractIle system protein; 1.78A {Gal | 99.77 | |
| 3dtp_E | 196 | RLC, myosin regulatory light chain; muscle protein | 99.77 | |
| 2bl0_C | 142 | Myosin regulatory light chain; muscle protein, sli | 99.77 | |
| 1dtl_A | 161 | Cardiac troponin C; helix-turn-helix, structural p | 99.77 | |
| 4gyi_A | 397 | RIO2 kinase; protein kinase, ADP complex, phosphoa | 99.77 | |
| 2mys_C | 149 | Myosin; muscle protein, motor protein; HET: MLY; 2 | 99.77 | |
| 2bl0_B | 145 | Myosin regulatory light chain; muscle protein, sli | 99.75 | |
| 1wdc_C | 156 | Scallop myosin; calcium binding protein, muscle pr | 99.75 | |
| 1m45_A | 148 | MLC1P, myosin light chain; protein-peptide complex | 99.75 | |
| 1w7j_B | 151 | Myosin light chain 1; motor protein, unconventiona | 99.74 | |
| 1qv0_A | 195 | Obelin, OBL; photoprotein, bioluminescence, atomic | 99.74 | |
| 2be4_A | 272 | Hypothetical protein LOC449832; DR.36843, BC083168 | 99.74 | |
| 2qac_A | 146 | Myosin A tail domain interacting protein MTIP; mal | 99.74 | |
| 1ggw_A | 140 | Protein (CDC4P); light chain, cytokinesis, cell cy | 99.74 | |
| 1uhk_A | 191 | Aequorin 2, aequorin; EF-hand motif, complex, lumi | 99.73 | |
| 3bow_A | 714 | Calpain-2 catalytic subunit; cysteine protease, in | 99.72 | |
| 3e3r_A | 204 | Calcyphosin, calcyphosine; human calcyphosine, EF- | 99.72 | |
| 2ccm_A | 191 | Calexcitin; EF hand, calcium, signaling protein; 1 | 99.71 | |
| 1nya_A | 176 | Calerythrin; EF-hand, metal binding protein; NMR { | 99.71 | |
| 1q80_A | 174 | SCP, sarcoplasmic calcium-binding protein; all-alp | 99.7 | |
| 2hpk_A | 208 | Photoprotein berovin; structural genomics, PSI, pr | 99.7 | |
| 3akb_A | 166 | Putative calcium binding protein; EF-hand, metal b | 99.7 | |
| 2jjz_A | 150 | Ionized calcium-binding adapter molecule 2; EF-han | 99.7 | |
| 2bec_A | 202 | Calcineurin B homologous protein 2; calcineurin-ho | 99.69 | |
| 3ll8_B | 155 | Calcineurin subunit B type 1; protein-peptide dock | 99.69 | |
| 1s6i_A | 188 | CDPK, calcium-dependent protein kinase SK5; EF-han | 99.68 | |
| 3sg6_A | 450 | Gcamp2, myosin light chain kinase, green fluoresce | 99.68 | |
| 2sas_A | 185 | Sarcoplasmic calcium-binding protein; 2.40A {Branc | 99.67 | |
| 3cs1_A | 219 | Flagellar calcium-binding protein; myristoylated, | 99.67 | |
| 3a8r_A | 179 | Putative uncharacterized protein; EF-hand, membran | 99.67 | |
| 2lhi_A | 176 | Calmodulin, serine/threonine-protein phosphatase c | 99.66 | |
| 3u0k_A | 440 | Rcamp; fluorescent protein, calcium binding, EF-ha | 99.66 | |
| 2lmt_A | 148 | Calmodulin-related protein 97A; spermatogenesis, m | 99.65 | |
| 2obh_A | 143 | Centrin-2; DNA repair complex EF hand superfamily | 99.65 | |
| 3i5g_C | 159 | Myosin catalytic light chain LC-1, mantle muscle; | 99.65 | |
| 1bjf_A | 193 | Neurocalcin delta; calcium-binding, myristoylation | 99.65 | |
| 1s6c_A | 183 | KV4 potassium channel-interacting protein kchip1B; | 99.65 | |
| 2ct9_A | 208 | Calcium-binding protein P22; EF-hand, metal bindin | 99.64 | |
| 3dd4_A | 229 | KV channel-interacting protein 4; EF-hands protein | 99.64 | |
| 1jfj_A | 134 | Ehcabp, calcium-binding protein; EF-hand, helix-lo | 99.64 | |
| 2lvv_A | 226 | Flagellar calcium-binding protein TB-24; EF-hand, | 99.63 | |
| 1jba_A | 204 | GCAP-2, protein (guanylate cyclase activating prot | 99.62 | |
| 2hps_A | 186 | Coelenterazine-binding protein with bound coelent; | 99.62 | |
| 2l2e_A | 190 | Calcium-binding protein NCS-1; NCS1P, myristoylate | 99.61 | |
| 1exr_A | 148 | Calmodulin; high resolution, disorder, metal trans | 99.61 | |
| 2r2i_A | 198 | Guanylyl cyclase-activating protein 1; EF hand, GC | 99.61 | |
| 2zfd_A | 226 | Calcineurin B-like protein 2; calcium binding prot | 99.6 | |
| 2ehb_A | 207 | Calcineurin B-like protein 4; protein complex, Ca( | 99.6 | |
| 1wy9_A | 147 | Allograft inflammatory factor 1; EF-hand, calucium | 99.6 | |
| 3i5g_B | 153 | Myosin regulatory light chain LC-2, mantle muscle; | 99.6 | |
| 2lv7_A | 100 | Calcium-binding protein 7; metal binding protein; | 99.59 | |
| 1qxp_A | 900 | MU-like calpain; M-calpain, MU-calpain, catalytic | 99.59 | |
| 2f33_A | 263 | Calbindin; EF-hand, Ca2+-binding, metal binding pr | 99.59 | |
| 1fpw_A | 190 | Yeast frequenin, calcium-binding protein NCS-1; EF | 99.59 | |
| 1s1e_A | 224 | KV channel interacting protein 1; kchip, calcium-b | 99.58 | |
| 2d8n_A | 207 | Recoverin; structural genomics, NPPSFA, national p | 99.58 | |
| 2d8n_A | 207 | Recoverin; structural genomics, NPPSFA, national p | 99.58 | |
| 1g8i_A | 190 | Frequenin, neuronal calcium sensor 1; calcium bind | 99.58 | |
| 2bl0_C | 142 | Myosin regulatory light chain; muscle protein, sli | 99.57 | |
| 2be4_A | 272 | Hypothetical protein LOC449832; DR.36843, BC083168 | 99.57 | |
| 2ggz_A | 211 | Guanylyl cyclase-activating protein 3; EF hand, gu | 99.57 | |
| 1dgu_A | 183 | Calcium-saturated CIB; helical, EF-hands, blood cl | 99.57 | |
| 3pm8_A | 197 | PFCDPK2, calcium-dependent protein kinase 2; malar | 99.56 | |
| 1dtl_A | 161 | Cardiac troponin C; helix-turn-helix, structural p | 99.56 | |
| 1ij5_A | 323 | Plasmodial specific LAV1-2 protein; fourty kDa cal | 99.55 | |
| 3k21_A | 191 | PFCDPK3, calcium-dependent protein kinase 3; calci | 99.55 | |
| 2jul_A | 256 | Calsenilin; EF-hand, calcium, LXXLL, DNA binding p | 99.55 | |
| 4ds7_A | 147 | Calmodulin, CAM; protein binding, metal binding, s | 99.55 | |
| 3ox6_A | 153 | Calcium-binding protein 1; EF-hand, calcium-sensor | 99.55 | |
| 2jnf_A | 158 | Troponin C; stretch activated muscle contraction, | 99.55 | |
| 2l4h_A | 214 | Calcium and integrin-binding protein 1; metal bind | 99.54 | |
| 3fwb_A | 161 | Cell division control protein 31; gene gating, com | 99.54 | |
| 3h4s_E | 135 | KCBP interacting Ca2+-binding protein; kinesin, mo | 99.54 | |
| 4drw_A | 121 | Protein S100-A10/annexin A2 chimeric protein; atyp | 99.54 | |
| 2f2o_A | 179 | Calmodulin fused with calmodulin-binding domain of | 99.53 | |
| 2pvb_A | 108 | Protein (parvalbumin); calcium binding protein, me | 99.53 | |
| 1bu3_A | 109 | Calcium-binding protein; 1.65A {Merluccius bilinea | 99.53 | |
| 5pal_A | 109 | Parvalbumin; calcium-binding protein; 1.54A {Triak | 99.53 | |
| 3qrx_A | 169 | Centrin; calcium-binding, EF-hand, cell division, | 99.53 | |
| 2l2e_A | 190 | Calcium-binding protein NCS-1; NCS1P, myristoylate | 99.53 | |
| 2aao_A | 166 | CDPK, calcium-dependent protein kinase, isoform AK | 99.52 | |
| 3fs7_A | 109 | Parvalbumin, thymic; calcium-binding protein, EF-h | 99.52 | |
| 2kn2_A | 92 | Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco | 99.51 | |
| 1pva_A | 110 | Parvalbumin; calcium binding; 1.65A {Esox lucius} | 99.51 | |
| 1wdc_C | 156 | Scallop myosin; calcium binding protein, muscle pr | 99.51 | |
| 1rwy_A | 109 | Parvalbumin alpha; EF-hand, calcium-binding, calci | 99.51 | |
| 2opo_A | 86 | Polcalcin CHE A 3; calcium-binding protein, dimer, | 99.5 | |
| 2mys_C | 149 | Myosin; muscle protein, motor protein; HET: MLY; 2 | 99.5 | |
| 1s6i_A | 188 | CDPK, calcium-dependent protein kinase SK5; EF-han | 99.5 | |
| 1top_A | 162 | Troponin C; contractIle system protein; 1.78A {Gal | 99.49 | |
| 1m45_A | 148 | MLC1P, myosin light chain; protein-peptide complex | 99.49 | |
| 1nya_A | 176 | Calerythrin; EF-hand, metal binding protein; NMR { | 99.48 | |
| 3j04_B | 143 | Myosin regulatory light chain 2, smooth muscle MA | 99.48 | |
| 3sjs_A | 220 | URE3-BP sequence specific DNA binding protein; EF- | 99.48 | |
| 1rro_A | 108 | RAT oncomodulin; calcium-binding protein; 1.30A {R | 99.48 | |
| 2ovk_C | 159 | Myosin catalytic light chain LC-1, mantle muscle, | 99.47 | |
| 1qxp_A | 900 | MU-like calpain; M-calpain, MU-calpain, catalytic | 99.47 | |
| 3mse_B | 180 | Calcium-dependent protein kinase, putative; CDPKS, | 99.46 | |
| 1wdc_B | 156 | Scallop myosin; calcium binding protein, muscle pr | 99.46 | |
| 3e3r_A | 204 | Calcyphosin, calcyphosine; human calcyphosine, EF- | 99.46 | |
| 3nso_A | 101 | Protein S100-A3; EF-hand, Ca2+, Zn2+ binding, meta | 99.46 | |
| 3tm0_A | 263 | Aminoglycoside 3'-phosphotransferase; protein kina | 99.45 | |
| 3khe_A | 191 | Calmodulin-like domain protein kinase isoform 3; c | 99.45 | |
| 1fpw_A | 190 | Yeast frequenin, calcium-binding protein NCS-1; EF | 99.45 | |
| 2ggz_A | 211 | Guanylyl cyclase-activating protein 3; EF hand, gu | 99.44 | |
| 1w7j_B | 151 | Myosin light chain 1; motor protein, unconventiona | 99.44 | |
| 2ovk_B | 153 | RLC, myosin regulatory light chain LC-2, mantle mu | 99.43 | |
| 3n22_A | 98 | Protein S100-A2; EF-hand, calcium-binding, zinc-bi | 99.43 | |
| 1avs_A | 90 | Troponin C; muscle contraction, calcium-activated, | 99.43 | |
| 2ktg_A | 85 | Calmodulin, putative; ehcam, Ca-binding protein, p | 99.43 | |
| 2mys_B | 166 | Myosin; muscle protein, motor protein; HET: MLY; 2 | 99.43 | |
| 3q5i_A | 504 | Protein kinase; CDPK, malaria, phosphotransferase, | 99.42 | |
| 2ehb_A | 207 | Calcineurin B-like protein 4; protein complex, Ca( | 99.42 | |
| 3dtp_E | 196 | RLC, myosin regulatory light chain; muscle protein | 99.42 | |
| 1jba_A | 204 | GCAP-2, protein (guanylate cyclase activating prot | 99.41 | |
| 1xk4_C | 113 | Calgranulin B; S100 family, heterotetramer, metal | 99.41 | |
| 2ccm_A | 191 | Calexcitin; EF hand, calcium, signaling protein; 1 | 99.41 | |
| 2joj_A | 77 | Centrin protein; N-terminal domain, centrin soluti | 99.41 | |
| 2lnk_A | 113 | Protein S100-A4; EF-hand, calcium binding, all alp | 99.41 | |
| 2hpk_A | 208 | Photoprotein berovin; structural genomics, PSI, pr | 99.41 | |
| 2r2i_A | 198 | Guanylyl cyclase-activating protein 1; EF hand, GC | 99.4 | |
| 1qv0_A | 195 | Obelin, OBL; photoprotein, bioluminescence, atomic | 99.4 | |
| 1bjf_A | 193 | Neurocalcin delta; calcium-binding, myristoylation | 99.4 | |
| 1alv_A | 173 | Calpain, S-camld; calcium binding, calmodulin like | 99.4 | |
| 1uhk_A | 191 | Aequorin 2, aequorin; EF-hand motif, complex, lumi | 99.4 | |
| 1fi6_A | 92 | EH domain protein REPS1; EPS15 homology domain, EF | 99.4 | |
| 3zwh_A | 104 | Protein S100-A4; Ca-binding protein-motor protein | 99.4 | |
| 1jfj_A | 134 | Ehcabp, calcium-binding protein; EF-hand, helix-lo | 99.39 | |
| 1g8i_A | 190 | Frequenin, neuronal calcium sensor 1; calcium bind | 99.39 | |
| 3a4u_B | 143 | Multiple coagulation factor deficiency protein 2; | 99.39 | |
| 3mwu_A | 486 | Calmodulin-domain protein kinase 1; serine/threoni | 99.39 | |
| 1s1e_A | 224 | KV channel interacting protein 1; kchip, calcium-b | 99.39 | |
| 2bec_A | 202 | Calcineurin B homologous protein 2; calcineurin-ho | 99.39 | |
| 2sas_A | 185 | Sarcoplasmic calcium-binding protein; 2.40A {Branc | 99.39 | |
| 4eto_A | 93 | Protein S100-A4; calcium-binding protein, EF-hand, | 99.39 | |
| 3sg6_A | 450 | Gcamp2, myosin light chain kinase, green fluoresce | 99.39 | |
| 1djx_A | 624 | PLC-D1, phosphoinositide-specific phospholipase C, | 99.39 | |
| 3ll8_B | 155 | Calcineurin subunit B type 1; protein-peptide dock | 99.38 | |
| 2bl0_B | 145 | Myosin regulatory light chain; muscle protein, sli | 99.38 | |
| 1ggw_A | 140 | Protein (CDC4P); light chain, cytokinesis, cell cy | 99.38 | |
| 2znd_A | 172 | Programmed cell death protein 6; penta-EF-hand pro | 99.37 | |
| 1j7q_A | 86 | CAVP, calcium vector protein; EF-hand family, calc | 99.37 | |
| 2y5i_A | 99 | S100Z, S100 calcium binding protein Z; metal-bindi | 99.36 | |
| 2kld_A | 123 | Polycystin-2; PC2, PKD2, calcium binding domain, E | 99.36 | |
| 2kyc_A | 108 | Parvalbumin-3, parvalbumin, thymic CPV3; EF-hand p | 99.36 | |
| 1s6c_A | 183 | KV4 potassium channel-interacting protein kchip1B; | 99.36 | |
| 1c07_A | 95 | Protein (epidermal growth factor receptor pathway | 99.36 | |
| 1y1x_A | 191 | Leishmania major homolog of programmed cell death | 99.35 | |
| 3akb_A | 166 | Putative calcium binding protein; EF-hand, metal b | 99.35 | |
| 1k9u_A | 78 | Polcalcin PHL P 7; pollen allergen, calcium-bindin | 99.35 | |
| 1gjy_A | 167 | Sorcin, CP-22, V19; calcium binding, calcium-bindi | 99.35 | |
| 1j55_A | 95 | S-100P protein; metal binding protein; 2.00A {Homo | 99.35 | |
| 3lij_A | 494 | Calcium/calmodulin dependent protein kinase with A | 99.35 | |
| 1tiz_A | 67 | Calmodulin-related protein, putative; helix-turn-h | 99.34 | |
| 1q80_A | 174 | SCP, sarcoplasmic calcium-binding protein; all-alp | 99.34 | |
| 3rm1_A | 92 | Protein S100-B; alpha-helical, EF hand, metal bind | 99.34 | |
| 1k94_A | 165 | Grancalcin; penta-EF-hand protein, calcium binding | 99.34 | |
| 2lvv_A | 226 | Flagellar calcium-binding protein TB-24; EF-hand, | 99.33 | |
| 2qac_A | 146 | Myosin A tail domain interacting protein MTIP; mal | 99.33 | |
| 1eh2_A | 106 | EPS15; calcium binding, signaling domain, NPF bind | 99.33 | |
| 1juo_A | 198 | Sorcin; calcium-binding proteins, penta-EF-hand, P | 99.33 | |
| 2wcb_A | 95 | Protein S100-A12; calcium signalling, HOST-parasit | 99.33 | |
| 2kz2_A | 94 | Calmodulin, CAM; TR2C, metal binding protein; NMR | 99.33 | |
| 2h2k_A | 106 | Protein S100-A13; calcium binding protein, metal b | 99.33 | |
| 1s6j_A | 87 | CDPK, calcium-dependent protein kinase SK5; EF-han | 99.33 | |
| 2pmy_A | 91 | RAS and EF-hand domain-containing protein; rasef, | 99.31 | |
| 2kgr_A | 111 | Intersectin-1; structure, alternative splicing, ca | 99.31 | |
| 2jul_A | 256 | Calsenilin; EF-hand, calcium, LXXLL, DNA binding p | 99.31 | |
| 3nxa_A | 100 | Protein S100-A16; S100 family, calcium binding pro | 99.31 | |
| 3nyv_A | 484 | Calmodulin-domain protein kinase 1; serine/threoni | 99.3 | |
| 2zfd_A | 226 | Calcineurin B-like protein 2; calcium binding prot | 99.3 | |
| 2ct9_A | 208 | Calcium-binding protein P22; EF-hand, metal bindin | 99.3 | |
| 2b1u_A | 71 | Calmodulin-like protein 5; CLSP, calmodulin-like S | 99.3 | |
| 1iq3_A | 110 | Ralbp1-interacting protein (partner of ralbp1); EF | 99.29 | |
| 3cs1_A | 219 | Flagellar calcium-binding protein; myristoylated, | 99.29 | |
| 2d58_A | 107 | Allograft inflammatory factor 1; EF-hand, metal bi | 99.28 | |
| 1qjt_A | 99 | EH1, epidermal growth factor receptor substrate su | 99.28 | |
| 1nd4_A | 264 | Aminoglycoside 3'-phosphotransferase; protein kina | 99.27 | |
| 2kax_A | 92 | Protein S100-A5; EF-hand, calcium binding protien, | 99.26 | |
| 1dgu_A | 183 | Calcium-saturated CIB; helical, EF-hands, blood cl | 99.26 | |
| 1yx7_A | 83 | Calsensin, LAN3-6 antigen; calcium-binding protein | 99.25 | |
| 1c7v_A | 81 | CAVP, calcium vector protein; EF-hand family, calc | 99.24 | |
| 3li6_A | 66 | Calcium-binding protein; calcium signaling protein | 99.24 | |
| 1sjj_A | 863 | Actinin; 3-helix bundle, calponin homology domain, | 99.24 | |
| 2zkm_X | 799 | 1-phosphatidylinositol-4,5-bisphosphate phosphodie | 99.24 | |
| 1k2h_A | 93 | S100A1, S-100 protein, alpha chain; non-covalent h | 99.24 | |
| 1qx2_A | 76 | Vitamin D-dependent calcium-binding protein, INTE; | 99.24 | |
| 3a8r_A | 179 | Putative uncharacterized protein; EF-hand, membran | 99.23 | |
| 1wlz_A | 105 | DJBP, CAP-binding protein complex interacting prot | 99.23 | |
| 2jq6_A | 139 | EH domain-containing protein 1; metal binding prot | 99.23 | |
| 1a4p_A | 96 | S100A10; S100 family, EF-hand protein, ligand of a | 99.22 | |
| 1psr_A | 100 | Psoriasin, S100A7; EF-hand protein, MAD phasing, p | 99.22 | |
| 2i7a_A | 174 | Calpain 13; calcium-dependent cytoplasmic cysteine | 99.21 | |
| 1xk4_A | 93 | Calgranulin A; S100 family, heterotetramer, metal | 99.2 | |
| 2hps_A | 186 | Coelenterazine-binding protein with bound coelent; | 99.18 | |
| 3dd4_A | 229 | KV channel-interacting protein 4; EF-hands protein | 99.18 | |
| 1k8u_A | 90 | S100A6, calcyclin, CACY; calcium regulatory protei | 99.17 | |
| 3dxp_A | 359 | Putative acyl-COA dehydrogenase; protein kinase-li | 99.17 | |
| 3sg8_A | 304 | APH(2'')-ID; antibiotic resistance enzyme, transfe | 99.17 | |
| 1cb1_A | 78 | Calbindin D9K; calcium-binding protein; NMR {Sus s | 99.16 | |
| 1sjj_A | 863 | Actinin; 3-helix bundle, calponin homology domain, | 99.16 | |
| 2l4h_A | 214 | Calcium and integrin-binding protein 1; metal bind | 99.15 | |
| 3bow_A | 714 | Calpain-2 catalytic subunit; cysteine protease, in | 99.12 | |
| 1h8b_A | 75 | ACT-EF34, alpha-actinin 2, skeletal muscle isoform | 99.08 | |
| 1qls_A | 99 | S100C protein, calgizzarin; metal-binding protein/ | 99.08 | |
| 1djx_A | 624 | PLC-D1, phosphoinositide-specific phospholipase C, | 99.05 | |
| 1eg3_A | 261 | Dystrophin; EF-hand like domain, WW domain, struct | 99.05 | |
| 1snl_A | 103 | Nucleobindin 1, calnuc; EF-hand, calcium-binding, | 99.0 | |
| 3fia_A | 121 | Intersectin-1; EH 1 domain, NESG, structural genom | 98.99 | |
| 3fs7_A | 109 | Parvalbumin, thymic; calcium-binding protein, EF-h | 98.97 | |
| 2lv7_A | 100 | Calcium-binding protein 7; metal binding protein; | 98.96 | |
| 5pal_A | 109 | Parvalbumin; calcium-binding protein; 1.54A {Triak | 98.94 | |
| 3h4s_E | 135 | KCBP interacting Ca2+-binding protein; kinesin, mo | 98.93 |
| >3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-76 Score=600.99 Aligned_cols=441 Identities=31% Similarity=0.545 Sum_probs=386.0
Q ss_pred CccccccccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEE
Q 042823 12 PILGKAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKS 91 (477)
Q Consensus 12 ~~~~~~~~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~ 91 (477)
.++......+.++|++.+.||+|+||.||+|.++.+++.||+|++.+...........+.+|+.++.++ +||||+++++
T Consensus 15 ~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~ 93 (484)
T 3nyv_A 15 MFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQL-DHPNIMKLYE 93 (484)
T ss_dssp ----CCCCCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTC-CCTTBCCEEE
T ss_pred eeeccCCCcccCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhC-CCCCCCcEEE
Confidence 345566778999999999999999999999999999999999999766544444567889999999999 7999999999
Q ss_pred EEEeCCeEEEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeec
Q 042823 92 TYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDF 171 (477)
Q Consensus 92 ~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Df 171 (477)
++.+.+.+|+|||||.||+|.+++...+.+++..++.++.||+.||.|||++||+||||||+||++...+..+.+||+||
T Consensus 94 ~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Df 173 (484)
T 3nyv_A 94 FFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDF 173 (484)
T ss_dssp EEECSSEEEEEECCCCSCBHHHHHHTCSCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSTTCCEEECCT
T ss_pred EEEeCCEEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEecCCCCCcEEEEee
Confidence 99999999999999999999999999999999999999999999999999999999999999999965556789999999
Q ss_pred CCccccCCCcceecccccccccchhhhhhhcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCC
Q 042823 172 GSALLFEEGQVYRDIVGSGFYIAPEVLRRRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPS 251 (477)
Q Consensus 172 g~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 251 (477)
|++............+||+.|+|||++.+.|+.++|||||||++|+|++|.+||.+.+.......+..+...++.+.|+.
T Consensus 174 g~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 253 (484)
T 3nyv_A 174 GLSTHFEASKKMKDKIGTAYYIAPEVLHGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKK 253 (484)
T ss_dssp THHHHBCCCCSHHHHTTGGGTCCHHHHHTCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCSGGGGG
T ss_pred eeeEEcccccccccCCCCccccCceeecCCCCCcceeHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCCCccccc
Confidence 99987766655566789999999999999999999999999999999999999999999999999999988888778889
Q ss_pred CCHHHHHHHHHhcccCccccCCHHHHhcCcccCcCCC------CCCchHHHHHHHHHhhhhHHHHhhhhhhhccC-Cchh
Q 042823 252 ISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGE------ASDDTSVILRMKQFRRMNKLKKLTIKVIVEYL-PDEE 324 (477)
Q Consensus 252 ~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~~~------~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~-~~~~ 324 (477)
+|+.+++||.+||+.||.+|||+.++|+||||+.... .......+.++++|...+++++.....+...+ +.++
T Consensus 254 ~s~~~~~li~~~L~~dp~~R~s~~e~l~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~qa~l~~i~~~~~~~~~ 333 (484)
T 3nyv_A 254 VSESAKDLIRKMLTYVPSMRISARDALDHEWIQTYTKEQISVDVPSLDNAILNIRQFQGTQKLAQAALLYMGSKLTSQDE 333 (484)
T ss_dssp SCHHHHHHHHHHTCSSGGGSCCHHHHHTSHHHHHHTC-----CCCBCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHCCCChhHCcCHHHHhhChhhcccccccccccccchHHHHHHHHHHhhhhHHHHHHHHHHHhccCcHHH
Confidence 9999999999999999999999999999999976432 12345677888999999999999888888765 7788
Q ss_pred hHHHHHHhhhcCCCCCCCccHHHHHHH----HHhhCCCCC-------HHHHHHHHHHhhccc----hHHHHHhcCCh---
Q 042823 325 TQALKEKFIEMDTDKNGTLSYDELRAG----LTKVGSMLT-------EFDVKHLMEAVKNSS----TLESLCENLPT--- 386 (477)
Q Consensus 325 ~~~l~~~F~~~D~~~~G~i~~~el~~~----l~~~~~~~~-------~~~~~~~~~~~d~~~----~~~~~~~~~~~--- 386 (477)
...+++.|..+|.|++|.|+.+||..+ ++.+|..++ +.++..+++.+|.++ ++++|...+..
T Consensus 334 ~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~D~d~~g~i~~~Ef~~~~~~~~~ 413 (484)
T 3nyv_A 334 TKELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAVEHEVDQVLDAVDFDKNGYIEYSEFVTVAMDRKT 413 (484)
T ss_dssp HHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHC----CGGGCSHHHHHHHHHHHHHHHTCCTTSEEEHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCcCCCceEeHHHHHHHHHHHhhhcccccccccccccHHHHHHHHHHhCCCCCCeEeHHHHHHHHHhccc
Confidence 889999999999999999999999544 445577777 788999999998543 47777655432
Q ss_pred -HHHHHHHHHhhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhh
Q 042823 387 -KEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDI 455 (477)
Q Consensus 387 -~~~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~ 455 (477)
...++++.+|+.||+|++|+|+.+||+.+|.. ..+++++++++++.+|.|+||.|+|+||+.+|...
T Consensus 414 ~~~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~--~~~~~~~~~~~~~~~D~d~dG~i~~~Ef~~~~~~~ 481 (484)
T 3nyv_A 414 LLSRERLERAFRMFDSDNSGKISSTELATIFGV--SDVDSETWKSVLSEVDKNNDGEVDFDEFQQMLLKL 481 (484)
T ss_dssp HHHHHHHHHHHHHHCTTCCSEEEHHHHHHHHHH--TTCCHHHHHHHHHHHCTTCCSEEEHHHHHHHHHHT
T ss_pred cCcHHHHHHHHHHHCCCCCCcCCHHHHHHHHHh--cCCCHHHHHHHHHHhcCCCCCcCCHHHHHHHHHhh
Confidence 23468999999999999999999999999987 56889999999999999999999999999999764
|
| >3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-75 Score=600.83 Aligned_cols=441 Identities=30% Similarity=0.503 Sum_probs=385.3
Q ss_pred ccccccccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccch----------hhHHHHHHHHHHHHhccC
Q 042823 13 ILGKAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRL----------AENDMIRREIQIRLYLSG 82 (477)
Q Consensus 13 ~~~~~~~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~----------~~~~~~~~e~~~~~~l~~ 82 (477)
+.......+.++|++++.||+|+||+||+|.++.+++.||+|++.+...... .....+.+|+.++..+ +
T Consensus 26 ~~~~~~~~i~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~ 104 (504)
T 3q5i_A 26 YVRKKEGKIGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSL-D 104 (504)
T ss_dssp GCCEECSCGGGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTC-C
T ss_pred eeeccCCCcccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhC-C
Confidence 4455667899999999999999999999999999999999999976432211 2356788999999999 7
Q ss_pred CCCeeEEEEEEEeCCeEEEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCC
Q 042823 83 QPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDD 162 (477)
Q Consensus 83 hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~ 162 (477)
||||+++++++.+...+|+|||||+||+|.+++...+.+++..++.++.||+.||.|||++||+||||||+||++...+.
T Consensus 105 hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~ 184 (504)
T 3q5i_A 105 HPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKNS 184 (504)
T ss_dssp CTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESSTTC
T ss_pred CCCCCeEEEEEEcCCEEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCcHHHEEEecCCC
Confidence 99999999999999999999999999999999999899999999999999999999999999999999999999954444
Q ss_pred CCCEEEeecCCccccCCCcceecccccccccchhhhhhhcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCc
Q 042823 163 NALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLRRRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEI 242 (477)
Q Consensus 163 ~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~ 242 (477)
...+||+|||++............+||+.|+|||++.+.|+.++||||+||++|+|++|.+||.+.+.......+..+..
T Consensus 185 ~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~ 264 (504)
T 3q5i_A 185 LLNIKIVDFGLSSFFSKDYKLRDRLGTAYYIAPEVLKKKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKGKY 264 (504)
T ss_dssp CSSEEECCCTTCEECCTTSCBCCCCSCTTTCCHHHHTTCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCC
T ss_pred CccEEEEECCCCEEcCCCCccccccCCcCCCCHHHhccCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCC
Confidence 45799999999988776666667789999999999998999999999999999999999999999999999999999888
Q ss_pred cCCCCCCCCCCHHHHHHHHHhcccCccccCCHHHHhcCcccCcCCCCCC------chHHHHHHHHHhhhhHHHHhhhhhh
Q 042823 243 DFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASD------DTSVILRMKQFRRMNKLKKLTIKVI 316 (477)
Q Consensus 243 ~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~~~~~~------~~~~~~~~~~~~~~~~l~~~~~~~i 316 (477)
.++...|+.+|+++++||.+||+.||.+|||+.++|+||||+....... ....+.++++|...+++++..+..+
T Consensus 265 ~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~~a~l~~i 344 (504)
T 3q5i_A 265 YFDFNDWKNISDEAKELIKLMLTYDYNKRCTAEEALNSRWIKKYANNINKSDQKTLCGALSNMRKFEGSQKLAQAAILFI 344 (504)
T ss_dssp CCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHHTCCCCCGGGHHHHHHHHHHHHHCCCCSHHHHHHHHHH
T ss_pred CCCccccCCCCHHHHHHHHHHcCCChhHCCCHHHHhcCHhhhhchhcccccchhhHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 7777777889999999999999999999999999999999987654322 2334667788888899999998888
Q ss_pred hccC-CchhhHHHHHHhhhcCCCCCCCccHHHHHHHHHhh--------CCCCCHHHHHHHHHHhhccc----hHHHHHhc
Q 042823 317 VEYL-PDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKV--------GSMLTEFDVKHLMEAVKNSS----TLESLCEN 383 (477)
Q Consensus 317 ~~~~-~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~--------~~~~~~~~~~~~~~~~d~~~----~~~~~~~~ 383 (477)
...+ +.++...++++|..+|.|++|.|+.+||..+++.+ |..+++.++..+++.+|.++ ++.+|...
T Consensus 345 ~~~~~~~~~~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~I~~~EF~~~ 424 (504)
T 3q5i_A 345 GSKLTTLEERKELTDIFKKLDKNGDGQLDKKELIEGYNVLRNFKNELGELKNVEEEVDNILKEVDFDKNGYIEYSEFISV 424 (504)
T ss_dssp HHHTSCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHHHHC--CCSCCCHHHHHHHHHHHHCTTCSSSEEHHHHHHH
T ss_pred hccCCcHHHHHHHHHHHHeeCCCCCCeEcHHHHHHHHHHhhhcccccccccccHHHHHHHHHHhCCCCCCcEeHHHHHHH
Confidence 8776 88889999999999999999999999999999988 55788899999999998543 47777765
Q ss_pred CChH----HHHHHHHHhhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhhh
Q 042823 384 LPTK----EKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIY 456 (477)
Q Consensus 384 ~~~~----~~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~~ 456 (477)
+... ..+.++.+|+.||.|++|+|+.+||+.++.. ..+++++++++++.+|.|+||.|+|+||+.+|....
T Consensus 425 ~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~El~~~l~~--~~~~~~~~~~~~~~~D~d~dG~I~~~EF~~~~~~~~ 499 (504)
T 3q5i_A 425 CMDKQILFSEERLRRAFNLFDTDKSGKITKEELANLFGL--TSISEKTWNDVLGEADQNKDNMIDFDEFVSMMHKIC 499 (504)
T ss_dssp HSCHHHHTCHHHHHHHHHHHCTTCCSEECHHHHHHHTTC--SCCCHHHHHHHHHTTCSSCSSSEEHHHHHHHHHHHC
T ss_pred HHhhhcccCHHHHHHHHHHhcCCCCCcCcHHHHHHHHhh--CCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHhc
Confidence 5432 2468999999999999999999999999876 458899999999999999999999999999998653
|
| >3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.4e-76 Score=600.94 Aligned_cols=440 Identities=31% Similarity=0.557 Sum_probs=384.2
Q ss_pred ccccccccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEE
Q 042823 13 ILGKAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKST 92 (477)
Q Consensus 13 ~~~~~~~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~ 92 (477)
++......+.++|++++.||+|+||+||+|+++.++..||+|++.+.... ......+.+|+.+++.+ +||||++++++
T Consensus 27 ~~~~~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~E~~~l~~l-~hpniv~~~~~ 104 (494)
T 3lij_A 27 FITSKKGHLSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVS-TSSNSKLLEEVAVLKLL-DHPNIMKLYDF 104 (494)
T ss_dssp GCCCCBCCHHHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC------CTTHHHHHHHHHHTTC-CCTTBCCEEEE
T ss_pred eeecCCCchhcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccC-chHHHHHHHHHHHHHhC-CCCCCCeEEEE
Confidence 44566678889999999999999999999999999999999999765322 22346788999999999 79999999999
Q ss_pred EEeCCeEEEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecC
Q 042823 93 YEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFG 172 (477)
Q Consensus 93 ~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg 172 (477)
+.+...+|+|||||+||+|.+++.....+++..++.++.||+.||.|||++||+||||||+||++...+..+.+||+|||
T Consensus 105 ~~~~~~~~lv~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG 184 (494)
T 3lij_A 105 FEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFG 184 (494)
T ss_dssp EECSSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSTTCCEEECCCT
T ss_pred EEeCCEEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCChhhEEEeCCCCCCcEEEEECC
Confidence 99999999999999999999999998999999999999999999999999999999999999999655556779999999
Q ss_pred CccccCCCcceecccccccccchhhhhhhcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCCC
Q 042823 173 SALLFEEGQVYRDIVGSGFYIAPEVLRRRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSI 252 (477)
Q Consensus 173 ~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 252 (477)
++............+||+.|+|||++.+.|+.++||||+||++|+|++|.+||.+.+..+....+..+...++.+.|+.+
T Consensus 185 ~a~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 264 (494)
T 3lij_A 185 LSAVFENQKKMKERLGTAYYIAPEVLRKKYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTFDSPEWKNV 264 (494)
T ss_dssp TCEECBTTBCBCCCCSCTTTCCHHHHTTCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCSGGGTTS
T ss_pred CCeECCCCccccccCCCcCeeCHHHHcccCCCchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCchhcccC
Confidence 99887766666677899999999999989999999999999999999999999999999999999999888888888899
Q ss_pred CHHHHHHHHHhcccCccccCCHHHHhcCcccCcCC-------CCCCchHHHHHHHHHhhhhHHHHhhhhhhhccC-Cchh
Q 042823 253 SSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESG-------EASDDTSVILRMKQFRRMNKLKKLTIKVIVEYL-PDEE 324 (477)
Q Consensus 253 ~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~~-------~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~-~~~~ 324 (477)
|+.+++||.+||+.||.+|||+.++|+||||+... ........+.++++|...+++++..+..+...+ +.++
T Consensus 265 s~~~~~li~~~L~~dp~~R~s~~e~l~hp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~qa~l~~ia~~~~~~~~ 344 (494)
T 3lij_A 265 SEGAKDLIKQMLQFDSQRRISAQQALEHPWIKEMCSKKESGIELPSLANAIENMRKFQNSQKLAQAALLYMASKLTSQEE 344 (494)
T ss_dssp CHHHHHHHHHHTCSSTTTSCCHHHHHTCHHHHHHHHHHHC---CCCCSSHHHHHHTTTTCCHHHHHHHHHHHHHSCCHHH
T ss_pred CHHHHHHHHHHCCCChhhCccHHHHhcCcccccCcccccccccccccHHHHHHHHHHHHhHHHHHHHHHHHHHhcccHHH
Confidence 99999999999999999999999999999997531 122344567788899999999999988888776 7888
Q ss_pred hHHHHHHhhhcCCCCCCCccHHHHHHHHHhhCC--------CCCHHHHHHHHHHhhccc----hHHHHHhcCCh----HH
Q 042823 325 TQALKEKFIEMDTDKNGTLSYDELRAGLTKVGS--------MLTEFDVKHLMEAVKNSS----TLESLCENLPT----KE 388 (477)
Q Consensus 325 ~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~--------~~~~~~~~~~~~~~d~~~----~~~~~~~~~~~----~~ 388 (477)
...+++.|..+|.|++|.|+.+||..+++.++. .+++.++..+++.+|.++ ++++|...+.. ..
T Consensus 345 ~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~~G~I~~~EF~~~~~~~~~~~~ 424 (494)
T 3lij_A 345 TKELTDIFRHIDKNGDGQLDRQELIDGYSKLSGEEVAVFDLPQIESEVDAILGAADFDRNGYIDYSEFVTVAMDRKSLLS 424 (494)
T ss_dssp HHHHHHHHHHHCTTCSSEECHHHHHHTTHHHHSSCCCCC--CHHHHHHHHHHHHHCTTCSSSEEHHHHHHHHSCHHHHTC
T ss_pred HHHHHHHHHHhCcCCCCeEcHHHHHHHHHHhcccccccccccccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHhhhcccc
Confidence 999999999999999999999999999999865 445788999999998543 57777765432 23
Q ss_pred HHHHHHHhhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhhh
Q 042823 389 KQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIY 456 (477)
Q Consensus 389 ~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~~ 456 (477)
.++++.+|+.||+|++|+|+.+||+.++.. ..+++++++++++.+|.|+||.|+|+||+.+|.+..
T Consensus 425 ~~~~~~~F~~~D~d~~G~Is~~El~~~l~~--~~~~~~~~~~~~~~~D~d~dG~I~~~EF~~~~~~~~ 490 (494)
T 3lij_A 425 KDKLESAFQKFDQDGNGKISVDELASVFGL--DHLESKTWKEMISGIDSNNDGDVDFEEFCKMIQKLC 490 (494)
T ss_dssp HHHHHHHHHHHCTTCSSEECHHHHHHHC-C--CSCCCHHHHHHHHTTCSSSSSSEEHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHCCCCCCcCCHHHHHHHHHh--cCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHhhc
Confidence 467999999999999999999999999876 578889999999999999999999999999998654
|
| >3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-76 Score=601.30 Aligned_cols=436 Identities=33% Similarity=0.568 Sum_probs=363.1
Q ss_pred ccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCe
Q 042823 19 EDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETA 98 (477)
Q Consensus 19 ~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~ 98 (477)
..+.++|++++.||+|+||+||+|.++.+++.||+|++.+.... ......+.+|+.+++++ +||||+++++++.+...
T Consensus 18 g~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~ 95 (486)
T 3mwu_A 18 GTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAK-NKDTSTILREVELLKKL-DHPNIMKLFEILEDSSS 95 (486)
T ss_dssp CHHHHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHB-CSCHHHHHHHHHHHHHC-CCTTBCCEEEEEECSSE
T ss_pred CChhcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEeccccc-chHHHHHHHHHHHHHhC-CCCCcCeEEEEEEcCCE
Confidence 46889999999999999999999999999999999998653221 22356788999999999 79999999999999999
Q ss_pred EEEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccC
Q 042823 99 VHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFE 178 (477)
Q Consensus 99 ~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~ 178 (477)
+|+|||||.||+|.+.+...+.+++..++.++.||+.||.|||++||+||||||+||++...+..+.+||+|||++....
T Consensus 96 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~ 175 (486)
T 3mwu_A 96 FYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQ 175 (486)
T ss_dssp EEEEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBC
T ss_pred EEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCCCCCCEEEEECCcCeECC
Confidence 99999999999999999998999999999999999999999999999999999999999665567789999999998876
Q ss_pred CCcceecccccccccchhhhhhhcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCCCCHHHHH
Q 042823 179 EGQVYRDIVGSGFYIAPEVLRRRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKD 258 (477)
Q Consensus 179 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 258 (477)
........+||+.|+|||++.+.|+.++||||+||++|+|++|.+||.+.+..+....+..+...++.+.|+.+|+++++
T Consensus 176 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~ 255 (486)
T 3mwu_A 176 QNTKMKDRIGTAYYIAPEVLRGTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKD 255 (486)
T ss_dssp CC----CCTTGGGGCCGGGGGSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCSCSGGGGGSCHHHHH
T ss_pred CCCccCCCcCCCCCCCHHHhCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCcccCCCCHHHHH
Confidence 66666677899999999999999999999999999999999999999999999999999999888888888899999999
Q ss_pred HHHHhcccCccccCCHHHHhcCcccCcCCCCCC-------chHHHHHHHHHhhhhHHHHhhhhhhhccC-CchhhHHHHH
Q 042823 259 LVRRMLTKDPKRRITAAQVLEHPWLRESGEASD-------DTSVILRMKQFRRMNKLKKLTIKVIVEYL-PDEETQALKE 330 (477)
Q Consensus 259 li~~~l~~dp~~R~s~~~~l~h~~~~~~~~~~~-------~~~~~~~~~~~~~~~~l~~~~~~~i~~~~-~~~~~~~l~~ 330 (477)
||.+||+.||.+|||+.++|+||||+....... ......++++|...+++++..+..+...+ +.++...+++
T Consensus 256 li~~~L~~dp~~R~t~~~~l~hp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ia~~l~~~~~~~~l~~ 335 (486)
T 3mwu_A 256 LIRKMLTFHPSLRITATQCLEHPWIQKYSSETPTISDLPSLESAMTNIRQFQAEKKLAQAALLYMASKLTTLDETKQLTE 335 (486)
T ss_dssp HHHHHTCSSTTTSCCHHHHHHCHHHHHTCCCCCCGGGHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHCCHHHHHHHHH
T ss_pred HHHHHcCCChhhCcCHHHHhcCHhhccCcccCccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHH
Confidence 999999999999999999999999987544321 12345677888888999998888888766 7788999999
Q ss_pred HhhhcCCCCCCCccHHHHHHHHH----hhCCCCC----------HHHHHHHHHHhhccc----hHHHHHhcCC----hHH
Q 042823 331 KFIEMDTDKNGTLSYDELRAGLT----KVGSMLT----------EFDVKHLMEAVKNSS----TLESLCENLP----TKE 388 (477)
Q Consensus 331 ~F~~~D~~~~G~i~~~el~~~l~----~~~~~~~----------~~~~~~~~~~~d~~~----~~~~~~~~~~----~~~ 388 (477)
+|..+|.|++|.|+.+||..++. .+|..++ +.++..+++.+|.++ ++.+|+..+. ...
T Consensus 336 ~F~~~D~d~dG~I~~~El~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~I~~~Ef~~~~~~~~~~~~ 415 (486)
T 3mwu_A 336 IFRKLDTNNDGMLDRDELVRGYHEFMRLKGVDSNSLIQNEGSTIEDQIDSLMPLLDMDGSGSIEYSEFIASAIDRTILLS 415 (486)
T ss_dssp HHHHHCTTCSSSBCHHHHHHHHHHHHHHHTCCGGGHHHHTSSCHHHHHHHHHHHHCTTCCSSBCHHHHHHHHSCTTTTCC
T ss_pred HHHHhCCCCCceeeHHHHHHHHHHhhhhhcccchhcccccchhhHHHHHHHHHHhcCCCCCcCcHHHHHHHHHhhhccch
Confidence 99999999999999999965555 4466665 888999999998543 5777765432 223
Q ss_pred HHHHHHHhhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhhh
Q 042823 389 KQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIY 456 (477)
Q Consensus 389 ~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~~ 456 (477)
.+.++.+|+.||+|++|.|+.+||+.++..+|..+++++++.+++.+|.|+||.|+|+||+.++....
T Consensus 416 ~~~~~~~F~~~D~d~dG~Is~~El~~~l~~~g~~~~~~~~~~~~~~~D~d~dG~I~~~EF~~~~~~~~ 483 (486)
T 3mwu_A 416 RERMERAFKMFDKDGSGKISTKELFKLFSQADSSIQMEELESIIEQVDNNKDGEVDFNEFVEMLQNFV 483 (486)
T ss_dssp HHHHHHHHHHHCSSCSSSBCSSCC--------------------CCCCSSCSSSBCHHHHHHHHHHHC
T ss_pred HHHHHHHHHHhCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHhh
Confidence 46899999999999999999999999999999999999999999999999999999999999998654
|
| >4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=9.6e-67 Score=493.16 Aligned_cols=258 Identities=29% Similarity=0.525 Sum_probs=234.0
Q ss_pred cccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEE
Q 042823 22 MLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHV 101 (477)
Q Consensus 22 ~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~l 101 (477)
.++|++++.||+|+||+||+|+++.+|+.||+|++.+...........+.+|++++.++ +|||||+++++|++++.+||
T Consensus 31 ~~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l-~HpnIv~l~~~~~~~~~~yi 109 (311)
T 4aw0_A 31 PEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DHPFFVKLYFTFQDDEKLYF 109 (311)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTC-CCTTBCCEEEEEECSSEEEE
T ss_pred ccccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhC-CCCCCCeEEEEEEeCCEEEE
Confidence 46799999999999999999999999999999999765433334567789999999999 79999999999999999999
Q ss_pred EEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCCC-
Q 042823 102 VMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEG- 180 (477)
Q Consensus 102 v~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~- 180 (477)
|||||+||+|.+++.+.+.+++.+++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+|+.....
T Consensus 110 vmEy~~gG~L~~~i~~~~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDlKPeNILl---~~~g~vKl~DFGla~~~~~~~ 186 (311)
T 4aw0_A 110 GLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILL---NEDMHIQITDFGTAKVLSPES 186 (311)
T ss_dssp EECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE---CTTSCEEECCCTTCEECCTTT
T ss_pred EEecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEE---cCCCCEEEEEcCCceecCCCC
Confidence 99999999999999999999999999999999999999999999999999999999 78899999999999876432
Q ss_pred --cceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCCCCHHHH
Q 042823 181 --QVYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAK 257 (477)
Q Consensus 181 --~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 257 (477)
....+.+||+.|||||++.+ .|+.++|||||||++|+|+||.+||.+.+..+.+.++.++.+.++ +.+|++++
T Consensus 187 ~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~~~p----~~~s~~~~ 262 (311)
T 4aw0_A 187 KQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDFP----EKFFPKAR 262 (311)
T ss_dssp TCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCC----TTCCHHHH
T ss_pred CcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCC----cccCHHHH
Confidence 23456799999999999976 599999999999999999999999999999999999998877654 46899999
Q ss_pred HHHHHhcccCccccCCHHH------HhcCcccCcCC
Q 042823 258 DLVRRMLTKDPKRRITAAQ------VLEHPWLRESG 287 (477)
Q Consensus 258 ~li~~~l~~dp~~R~s~~~------~l~h~~~~~~~ 287 (477)
+||.+||++||++|||+.| +++||||+...
T Consensus 263 dli~~lL~~dp~~R~t~~e~~~~~~i~~Hp~F~~id 298 (311)
T 4aw0_A 263 DLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVT 298 (311)
T ss_dssp HHHHHHSCSSGGGSTTSGGGTCHHHHHTSGGGTTCC
T ss_pred HHHHHHccCCHhHCcChHHHcCCHHHHCCCCcCCCC
Confidence 9999999999999999988 58899998653
|
| >3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-66 Score=481.32 Aligned_cols=255 Identities=32% Similarity=0.579 Sum_probs=215.0
Q ss_pred ccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 042823 23 LHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVV 102 (477)
Q Consensus 23 ~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~lv 102 (477)
++|++++.||+|+||+||+|.++.+|+.||+|++.+...........+.+|+.+++++ +|||||++++++++++.+|+|
T Consensus 13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~~~~~~~~~~~~~iv 91 (275)
T 3hyh_A 13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLL-RHPHIIKLYDVIKSKDEIIMV 91 (275)
T ss_dssp -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHC-CCTTBCCEEEEEECSSEEEEE
T ss_pred eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHC-CCCCCCeEEEEEEECCEEEEE
Confidence 6899999999999999999999999999999999876544444567789999999999 799999999999999999999
Q ss_pred EeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCCCcc
Q 042823 103 MELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQV 182 (477)
Q Consensus 103 ~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~ 182 (477)
|||| +|+|.+++.+++.+++.+++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+|+.......
T Consensus 92 mEy~-~g~L~~~l~~~~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDiKP~NILl---~~~~~vkl~DFGla~~~~~~~~ 167 (275)
T 3hyh_A 92 IEYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLL---DEHLNVKIADFGLSNIMTDGNF 167 (275)
T ss_dssp EECC-CEEHHHHHHHSCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEE---CTTCCEEECCSSCC--------
T ss_pred EeCC-CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCChHHeEE---CCCCCEEEeecCCCeecCCCCc
Confidence 9999 67999999999999999999999999999999999999999999999999 7788999999999988766666
Q ss_pred eecccccccccchhhhhhh-c-CCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCCCCHHHHHHH
Q 042823 183 YRDIVGSGFYIAPEVLRRR-Y-GKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLV 260 (477)
Q Consensus 183 ~~~~~gt~~y~aPE~~~~~-~-~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li 260 (477)
..+.+||+.|||||++.+. | +.++||||+||++|+|+||++||.+.+.......+..+...++ ..+|+++++||
T Consensus 168 ~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~~~~~~~i~~~~~~~p----~~~s~~~~~li 243 (275)
T 3hyh_A 168 LKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLP----KFLSPGAAGLI 243 (275)
T ss_dssp -------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCC----TTSCHHHHHHH
T ss_pred cCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCC----CCCCHHHHHHH
Confidence 6678999999999999764 4 6899999999999999999999999888888888888776554 46899999999
Q ss_pred HHhcccCccccCCHHHHhcCcccCcC
Q 042823 261 RRMLTKDPKRRITAAQVLEHPWLRES 286 (477)
Q Consensus 261 ~~~l~~dp~~R~s~~~~l~h~~~~~~ 286 (477)
.+||++||++|||++|+++||||+..
T Consensus 244 ~~~L~~dP~~R~s~~eil~hpw~k~~ 269 (275)
T 3hyh_A 244 KRMLIVNPLNRISIHEIMQDDWFKVD 269 (275)
T ss_dssp HHHSCSSGGGSCCHHHHHHCHHHHTT
T ss_pred HHHccCChhHCcCHHHHHcCcccccC
Confidence 99999999999999999999999753
|
| >4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.4e-65 Score=487.83 Aligned_cols=260 Identities=29% Similarity=0.491 Sum_probs=230.7
Q ss_pred cccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeE
Q 042823 20 DVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAV 99 (477)
Q Consensus 20 ~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~ 99 (477)
+..+.|++.+.||+|+||+||+|+++.+|+.||||++.+.... ....+.+|+.+++.+ +|||||+++++|++++.+
T Consensus 71 dp~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~---~~~~~~~Ei~il~~l-~HpnIV~l~~~~~~~~~~ 146 (346)
T 4fih_A 71 DPRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQ---RRELLFNEVVIMRDY-QHENVVEMYNSYLVGDEL 146 (346)
T ss_dssp CGGGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCS---SGGGGHHHHHHHHHC-CCTTBCCEEEEEEETTEE
T ss_pred ChhHhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchh---HHHHHHHHHHHHHhC-CCCCCCcEEEEEEECCEE
Confidence 3457799999999999999999999999999999999754322 234578999999999 799999999999999999
Q ss_pred EEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCC
Q 042823 100 HVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEE 179 (477)
Q Consensus 100 ~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~ 179 (477)
|||||||+||+|.+++.+ +.+++.+++.++.||+.||.|||++|||||||||+|||+ +.++.+||+|||+|.....
T Consensus 147 ~ivmEy~~gg~L~~~l~~-~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl---~~~g~vKl~DFGla~~~~~ 222 (346)
T 4fih_A 147 WVVMEFLEGGALTDIVTH-TRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILL---THDGRVKLSDFGFCAQVSK 222 (346)
T ss_dssp EEEECCCTTEEHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE---CTTCCEEECCCTTCEECCS
T ss_pred EEEEeCCCCCcHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEE---CCCCCEEEecCcCceecCC
Confidence 999999999999998865 569999999999999999999999999999999999999 7888999999999987654
Q ss_pred C-cceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCCCCHHHH
Q 042823 180 G-QVYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAK 257 (477)
Q Consensus 180 ~-~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 257 (477)
. ....+.+||+.|||||++.+ .|+.++|||||||++|+|++|.+||.+.+..+.+..+..... .....++.+|++++
T Consensus 223 ~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~-~~~~~~~~~s~~~~ 301 (346)
T 4fih_A 223 EVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLP-PRLKNLHKVSPSLK 301 (346)
T ss_dssp SSCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSSC-CCCSCGGGSCHHHH
T ss_pred CCCcccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCC-CCCCccccCCHHHH
Confidence 3 34567899999999999975 699999999999999999999999999888888888776543 22334567999999
Q ss_pred HHHHHhcccCccccCCHHHHhcCcccCcCCC
Q 042823 258 DLVRRMLTKDPKRRITAAQVLEHPWLRESGE 288 (477)
Q Consensus 258 ~li~~~l~~dp~~R~s~~~~l~h~~~~~~~~ 288 (477)
+||.+||++||++|||+.|+|+||||++...
T Consensus 302 dli~~~L~~dP~~R~ta~e~l~Hp~~~~~~~ 332 (346)
T 4fih_A 302 GFLDRLLVRDPAQRATAAELLKHPFLAKAGP 332 (346)
T ss_dssp HHHHHHSCSSTTTSCCHHHHTTCGGGGGCCC
T ss_pred HHHHHHcCCChhHCcCHHHHhcCHhhcCCCC
Confidence 9999999999999999999999999987654
|
| >4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.7e-65 Score=488.48 Aligned_cols=258 Identities=27% Similarity=0.489 Sum_probs=225.9
Q ss_pred cccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEE
Q 042823 22 MLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHV 101 (477)
Q Consensus 22 ~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~l 101 (477)
+++|++++.||+|+||+||+|+++.+|+.||||++.+... .......+.+|++++.+| +|||||+++++|++++.+||
T Consensus 23 me~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~-~~~~~~~~~~E~~il~~l-~HpnIV~~~~~~~~~~~~yi 100 (350)
T 4b9d_A 23 MEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRM-SSKEREESRREVAVLANM-KHPNIVQYRESFEENGSLYI 100 (350)
T ss_dssp CCCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTS-CHHHHHHHHHHHHHHHHC-CCTTBCCEEEEEEETTEEEE
T ss_pred ccceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHC-CHHHHHHHHHHHHHHHHC-CCCCCCcEEEEEEECCEEEE
Confidence 5799999999999999999999999999999999976543 344567899999999999 79999999999999999999
Q ss_pred EEeccCCCchHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCC
Q 042823 102 VMELCEGGDLFDRIIAK--GYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEE 179 (477)
Q Consensus 102 v~e~~~gg~L~~~l~~~--~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~ 179 (477)
|||||+||+|.+++... ..+++.+++.++.||+.||.|||++|||||||||+|||+ +.++.+||+|||+|+....
T Consensus 101 VmEy~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl---~~~g~vKl~DFGla~~~~~ 177 (350)
T 4b9d_A 101 VMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFL---TKDGTVQLGDFGIARVLNS 177 (350)
T ss_dssp EEECCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTCEETTCCGGGEEE---CTTCCEEECSTTEESCCCH
T ss_pred EEeCCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEE---CCCCCEEEcccccceeecC
Confidence 99999999999999764 357999999999999999999999999999999999999 7788999999999987654
Q ss_pred Cc-ceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCCCCHHHH
Q 042823 180 GQ-VYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAK 257 (477)
Q Consensus 180 ~~-~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 257 (477)
.. .....+||+.|||||++.+ .|+.++|||||||++|+|+||.+||.+.+..+.+.++..+..+ +.++.+|++++
T Consensus 178 ~~~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~~~~---~~~~~~s~~~~ 254 (350)
T 4b9d_A 178 TVELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGSFP---PVSLHYSYDLR 254 (350)
T ss_dssp HHHHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCC---CCCTTSCHHHH
T ss_pred CcccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCCC---CCCccCCHHHH
Confidence 32 2345689999999999986 5999999999999999999999999999998999898887653 23457899999
Q ss_pred HHHHHhcccCccccCCHHHHhcCcccCcCC
Q 042823 258 DLVRRMLTKDPKRRITAAQVLEHPWLRESG 287 (477)
Q Consensus 258 ~li~~~l~~dp~~R~s~~~~l~h~~~~~~~ 287 (477)
+||.+||++||++|||+.|+|+||||+...
T Consensus 255 ~li~~~L~~dP~~R~s~~e~l~hp~~~~~~ 284 (350)
T 4b9d_A 255 SLVSQLFKRNPRDRPSVNSILEKGFIAKRI 284 (350)
T ss_dssp HHHHHHTCSSGGGSCCHHHHHTSHHHHTTG
T ss_pred HHHHHHccCChhHCcCHHHHhcCHHhhcCC
Confidence 999999999999999999999999997643
|
| >3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-63 Score=469.50 Aligned_cols=257 Identities=19% Similarity=0.339 Sum_probs=220.4
Q ss_pred cccc-cccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEe----C
Q 042823 22 MLHY-FFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYED----E 96 (477)
Q Consensus 22 ~~~Y-~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~----~ 96 (477)
..+| ++.+.||+|+||+||+|.++.++..||+|++..... .......+.+|+.+++++ +|||||+++++|++ +
T Consensus 24 ~gr~~~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~-~~~~~~~~~~E~~il~~l-~HpnIV~~~~~~~~~~~~~ 101 (290)
T 3fpq_A 24 DGRFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKL-TKSERQRFKEEAEMLKGL-QHPNIVRFYDSWESTVKGK 101 (290)
T ss_dssp TSSEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGS-CHHHHHHHHHHHHHHHTC-CCTTBCCEEEEEEEEETTE
T ss_pred CCceEEeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhC-CHHHHHHHHHHHHHHHhC-CCCCCCcEEEEEeeccCCC
Confidence 3455 788899999999999999999999999999976432 334567889999999999 79999999999975 4
Q ss_pred CeEEEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcC--CeeccCCCCceeeeecCCCCCEEEeecCCc
Q 042823 97 TAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMG--VMHRDLKPENFSFISRDDNALLKVTDFGSA 174 (477)
Q Consensus 97 ~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~--ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a 174 (477)
..+|||||||+||+|.+++.+.+.+++..++.++.||+.||.|||++| ||||||||+|||+. +.++.+||+|||+|
T Consensus 102 ~~~~lvmEy~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~ylH~~~~~IiHRDlKp~NILl~--~~~g~vKl~DFGla 179 (290)
T 3fpq_A 102 KCIVLVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFIT--GPTGSVKIGDLGLA 179 (290)
T ss_dssp EEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCCCCCGGGEEES--STTSCEEECCTTGG
T ss_pred cEEEEEEeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEecccChhheeEE--CCCCCEEEEeCcCC
Confidence 568999999999999999999999999999999999999999999998 99999999999992 24678999999999
Q ss_pred cccCCCcceecccccccccchhhhhhhcCCccchHhHHHHHHHHhhCCCCCCCCChhh-HHHHHHcCCccCCCCCCCCCC
Q 042823 175 LLFEEGQVYRDIVGSGFYIAPEVLRRRYGKEIDIWSAGVILYILLSGVPPFWAETKKG-TYDAILQGEIDFDTDPWPSIS 253 (477)
Q Consensus 175 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~-~~~~i~~~~~~~~~~~~~~~~ 253 (477)
+.... ....+.+|||.|||||++.+.|+.++|||||||++|+|+||.+||.+..... ....+..+..+ ....+.++
T Consensus 180 ~~~~~-~~~~~~~GTp~YmAPE~~~~~y~~~~DiwSlGvilyelltg~~Pf~~~~~~~~~~~~i~~~~~~--~~~~~~~~ 256 (290)
T 3fpq_A 180 TLKRA-SFAKAVIGTPEFMAPEMYEEKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKP--ASFDKVAI 256 (290)
T ss_dssp GGCCT-TSBEESCSSCCCCCGGGGGTCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCC--GGGGGCCC
T ss_pred EeCCC-CccCCcccCccccCHHHcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcHHHHHHHHHcCCCC--CCCCccCC
Confidence 86543 3445679999999999999999999999999999999999999997755444 44445444322 12234578
Q ss_pred HHHHHHHHHhcccCccccCCHHHHhcCcccCc
Q 042823 254 STAKDLVRRMLTKDPKRRITAAQVLEHPWLRE 285 (477)
Q Consensus 254 ~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~ 285 (477)
+++++||.+||++||++|||+.++|+||||++
T Consensus 257 ~~~~~li~~~L~~dP~~R~s~~e~l~Hp~~~~ 288 (290)
T 3fpq_A 257 PEVKEIIEGCIRQNKDERYSIKDLLNHAFFQE 288 (290)
T ss_dssp HHHHHHHHHHSCSSGGGSCCHHHHHTSGGGC-
T ss_pred HHHHHHHHHHccCChhHCcCHHHHhcCccccC
Confidence 99999999999999999999999999999975
|
| >3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-64 Score=479.05 Aligned_cols=256 Identities=27% Similarity=0.490 Sum_probs=221.4
Q ss_pred cccccccccccccCCeEEEEEEEc---cCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCe
Q 042823 22 MLHYFFGRMLGRGQFGVSYLCTEN---STNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETA 98 (477)
Q Consensus 22 ~~~Y~~~~~iG~G~~g~V~~~~~~---~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~ 98 (477)
.++|++++.||+|+||+||+|++. .+++.||+|++.+.... ......+.+|+.++.++ +|||||+++++|++++.
T Consensus 23 p~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~-~~~~~~~~~E~~il~~l-~HpnIv~l~~~~~~~~~ 100 (304)
T 3ubd_A 23 PSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLK-VRDRVRTKMERDILVEV-NHPFIVKLHYAFQTEGK 100 (304)
T ss_dssp GGGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEE-EEECC------CCCCCC-CCTTEECEEEEEEETTE
T ss_pred ccccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcC-hHHHHHHHHHHHHHHHC-CCCCCCeEEEEEEECCE
Confidence 368999999999999999999884 46889999999764322 12234577899999998 79999999999999999
Q ss_pred EEEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccC
Q 042823 99 VHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFE 178 (477)
Q Consensus 99 ~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~ 178 (477)
+|||||||+||+|.+++.+.+.+++.+++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+|+...
T Consensus 101 ~~ivmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl---~~~g~vKl~DFGla~~~~ 177 (304)
T 3ubd_A 101 LYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILL---DEEGHIKLTDFGLSKESI 177 (304)
T ss_dssp EEEEECCCTTCEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEE---CTTSCEEEESSEEEEC--
T ss_pred EEEEEEcCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHeEE---cCCCCEEecccccceecc
Confidence 99999999999999999999999999999999999999999999999999999999999 788899999999998654
Q ss_pred C-Ccceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCCCCHHH
Q 042823 179 E-GQVYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTA 256 (477)
Q Consensus 179 ~-~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 256 (477)
. .....+.+||+.|||||++.+ .|+.++|||||||++|+|+||.+||.+.+..+....+.++...++ +.+|+++
T Consensus 178 ~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~~~~~p----~~~s~~~ 253 (304)
T 3ubd_A 178 DHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMP----QFLSPEA 253 (304)
T ss_dssp ---CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCC----TTSCHHH
T ss_pred CCCccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCHHHHHHHHHcCCCCCC----CcCCHHH
Confidence 3 334456789999999999975 699999999999999999999999999999999999988766543 4689999
Q ss_pred HHHHHHhcccCccccCC-----HHHHhcCcccCcC
Q 042823 257 KDLVRRMLTKDPKRRIT-----AAQVLEHPWLRES 286 (477)
Q Consensus 257 ~~li~~~l~~dp~~R~s-----~~~~l~h~~~~~~ 286 (477)
++||.+||++||++||| ++|+++||||+..
T Consensus 254 ~~li~~~L~~dP~~R~ta~~~~~~eil~Hp~f~~i 288 (304)
T 3ubd_A 254 QSLLRMLFKRNPANRLGAGPDGVEEIKRHSFFSTI 288 (304)
T ss_dssp HHHHHHHTCSSGGGSTTCSTTTHHHHHTSGGGTTC
T ss_pred HHHHHHHcccCHHHCCCCCcCCHHHHHcCccccCC
Confidence 99999999999999998 5799999999764
|
| >4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-63 Score=488.90 Aligned_cols=260 Identities=29% Similarity=0.491 Sum_probs=231.3
Q ss_pred cccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeE
Q 042823 20 DVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAV 99 (477)
Q Consensus 20 ~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~ 99 (477)
+..++|++.+.||+|+||+||+|+++.+|+.||||++...... ....+.+|+.+++.+ +|||||+++++|++++.+
T Consensus 148 dp~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~---~~~~~~~Ei~il~~l-~HpnIV~l~~~~~~~~~~ 223 (423)
T 4fie_A 148 DPRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQ---RRELLFNEVVIMRDY-QHENVVEMYNSYLVGDEL 223 (423)
T ss_dssp CGGGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCS---SGGGHHHHHHHHHHC-CCTTBCCEEEEEEETTEE
T ss_pred ChhHhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchh---HHHHHHHHHHHHHhC-CCCCCCceEEEEEECCEE
Confidence 4567899999999999999999999999999999999765332 234678999999999 799999999999999999
Q ss_pred EEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCC
Q 042823 100 HVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEE 179 (477)
Q Consensus 100 ~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~ 179 (477)
|||||||+||+|.+++.. +.+++.+++.++.||+.||.|||++|||||||||+|||+ +.++.+||+|||+|.....
T Consensus 224 ~iVmEy~~gG~L~~~i~~-~~l~e~~~~~~~~qil~aL~ylH~~~IiHRDiKp~NILl---~~~g~vKl~DFGla~~~~~ 299 (423)
T 4fie_A 224 WVVMEFLEGGALTDIVTH-TRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILL---THDGRVKLSDFGFCAQVSK 299 (423)
T ss_dssp EEEEECCTTEEHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSTTTEEE---CTTCCEEECCCTTCEECCS
T ss_pred EEEEeCCCCCcHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEE---cCCCCEEEecCccceECCC
Confidence 999999999999998865 569999999999999999999999999999999999999 7888999999999987654
Q ss_pred C-cceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCCCCHHHH
Q 042823 180 G-QVYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAK 257 (477)
Q Consensus 180 ~-~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 257 (477)
. ....+.+||+.|||||++.+ .|+.++|||||||++|+|++|.+||.+.+....+..+..... .....+..+|++++
T Consensus 300 ~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~-~~~~~~~~~s~~~~ 378 (423)
T 4fie_A 300 EVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLP-PRLKNLHKVSPSLK 378 (423)
T ss_dssp SCCCBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCC-CCCSCTTSSCHHHH
T ss_pred CCccccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCC-CCCcccccCCHHHH
Confidence 3 34567799999999999975 699999999999999999999999999888888888776543 23334568999999
Q ss_pred HHHHHhcccCccccCCHHHHhcCcccCcCCC
Q 042823 258 DLVRRMLTKDPKRRITAAQVLEHPWLRESGE 288 (477)
Q Consensus 258 ~li~~~l~~dp~~R~s~~~~l~h~~~~~~~~ 288 (477)
+||.+||++||++|||+.|+|+||||+....
T Consensus 379 dli~~~L~~dP~~R~ta~ell~Hp~~~~~~~ 409 (423)
T 4fie_A 379 GFLDRLLVRDPAQRATAAELLKHPFLAKAGP 409 (423)
T ss_dssp HHHHHHSCSSTTTSCCHHHHTTCGGGGGCCC
T ss_pred HHHHHHcCCChhHCcCHHHHhcCHHhcCCCC
Confidence 9999999999999999999999999987643
|
| >4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-62 Score=470.45 Aligned_cols=255 Identities=24% Similarity=0.332 Sum_probs=222.8
Q ss_pred cccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEE
Q 042823 22 MLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHV 101 (477)
Q Consensus 22 ~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~l 101 (477)
.+.|.+.++||+|+||+||+|+++.+|+.||||++.+.... .+|+.++..+ +|||||+++++|++++.+||
T Consensus 57 ~~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~~--------~~E~~il~~l-~HpnIV~l~~~~~~~~~~~i 127 (336)
T 4g3f_A 57 VHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFR--------VEELVACAGL-SSPRIVPLYGAVREGPWVNI 127 (336)
T ss_dssp TTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCC--------THHHHTTTTC-CCTTBCCEEEEEEETTEEEE
T ss_pred hhheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHhH--------HHHHHHHHhC-CCCCCCcEEEEEEECCEEEE
Confidence 45688899999999999999999999999999999764321 3699999999 79999999999999999999
Q ss_pred EEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCC-CEEEeecCCccccCCC
Q 042823 102 VMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNA-LLKVTDFGSALLFEEG 180 (477)
Q Consensus 102 v~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~-~~kl~Dfg~a~~~~~~ 180 (477)
|||||+||+|.+++.+.+.+++.+++.++.||+.||.|||++|||||||||+|||+ +.++ .+||+|||+|+.....
T Consensus 128 vmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl---~~~g~~vKl~DFGla~~~~~~ 204 (336)
T 4g3f_A 128 FMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLL---SSDGSRAALCDFGHALCLQPD 204 (336)
T ss_dssp EECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTTEECSCCCGGGEEE---CTTSCCEEECCCTTCEEC---
T ss_pred EEeccCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEE---eCCCCEEEEeeCCCCeEccCC
Confidence 99999999999999999999999999999999999999999999999999999999 5555 6999999999876543
Q ss_pred cc------eecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCCCC
Q 042823 181 QV------YRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSIS 253 (477)
Q Consensus 181 ~~------~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 253 (477)
.. ....+||+.|||||++.+ .|+.++|||||||++|+|+||.+||.+.+.......+..+..++. ..++.+|
T Consensus 205 ~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~~~~~~-~~~~~~s 283 (336)
T 4g3f_A 205 GLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKIASEPPPIR-EIPPSCA 283 (336)
T ss_dssp ---------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCCHHHHHHSCCGGG-GSCTTSC
T ss_pred CcccceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHcCCCCch-hcCccCC
Confidence 21 123579999999999976 599999999999999999999999999888888888887765432 2346799
Q ss_pred HHHHHHHHHhcccCccccCCHHHH-------------hcCcccCcCCCC
Q 042823 254 STAKDLVRRMLTKDPKRRITAAQV-------------LEHPWLRESGEA 289 (477)
Q Consensus 254 ~~~~~li~~~l~~dp~~R~s~~~~-------------l~h~~~~~~~~~ 289 (477)
+++++||.+||++||.+|||+.|+ |+|||+.....+
T Consensus 284 ~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~~~~~l~hPw~~~~~~P 332 (336)
T 4g3f_A 284 PLTAQAIQEGLRKEPVHRASAMELRRKVGKALQEVGGLKSPWKGEYKEP 332 (336)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHTTSSCSCSSSSCCCC
T ss_pred HHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHhhhhhccCCCcCCCCCC
Confidence 999999999999999999999997 679999876543
|
| >4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-60 Score=468.37 Aligned_cols=262 Identities=27% Similarity=0.377 Sum_probs=224.9
Q ss_pred cccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEe----
Q 042823 20 DVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYED---- 95 (477)
Q Consensus 20 ~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~---- 95 (477)
.+.++|++++.||+|+||+||+|+++.+|+.||||++.+... .......+.+|+++++.+ +|||||++++++..
T Consensus 51 ~i~~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~-~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~~~ 128 (398)
T 4b99_A 51 DVGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFD-VVTNAKRTLRELKILKHF-KHDNIIAIKDILRPTVPY 128 (398)
T ss_dssp CCCSSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTS-SHHHHHHHHHHHHHHHHC-CCTTBCCEEEECCCSSCT
T ss_pred CCCCCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECcccc-chHHHHHHHHHHHHHHhc-CCCCcceEeeeeeccccc
Confidence 456789999999999999999999999999999999965432 334456788999999999 79999999999864
Q ss_pred --CCeEEEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCC
Q 042823 96 --ETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGS 173 (477)
Q Consensus 96 --~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~ 173 (477)
.+.+|||||||+ |+|.+++.+.+.+++.+++.+++||+.||.|||++|||||||||+|||+ +.++.+||+|||+
T Consensus 129 ~~~~~~~ivmE~~~-g~L~~~i~~~~~l~~~~~~~~~~qil~al~ylH~~~iiHRDlKP~NIl~---~~~~~~Ki~DFGl 204 (398)
T 4b99_A 129 GEFKSVYVVLDLME-SDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLV---NENCELKIGDFGM 204 (398)
T ss_dssp TTCCCEEEEEECCS-EEHHHHHTSSSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEE---CTTCCEEECCCTT
T ss_pred ccCCEEEEEEeCCC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCcCcCCCcCcccccc---CCCCCEEEeecce
Confidence 367999999996 5899999999999999999999999999999999999999999999999 7889999999999
Q ss_pred ccccCCC-----cceecccccccccchhhhhh--hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCC
Q 042823 174 ALLFEEG-----QVYRDIVGSGFYIAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDT 246 (477)
Q Consensus 174 a~~~~~~-----~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~ 246 (477)
|+.+... ....+.+||++|||||++.+ .|+.++||||+|||+|+|++|.+||.+.+..+.+..|.......+.
T Consensus 205 a~~~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l~~I~~~~g~p~~ 284 (398)
T 4b99_A 205 ARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSP 284 (398)
T ss_dssp CBCC-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCG
T ss_pred eeecccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCh
Confidence 9865332 23346799999999999865 4799999999999999999999999999888888777653222111
Q ss_pred C---------------------------CCCCCCHHHHHHHHHhcccCccccCCHHHHhcCcccCcCC
Q 042823 247 D---------------------------PWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESG 287 (477)
Q Consensus 247 ~---------------------------~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~~ 287 (477)
. .++.+|+++++||.+||++||++|||+.|+|+||||+...
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~~ 352 (398)
T 4b99_A 285 AVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRHPFLAKYH 352 (398)
T ss_dssp GGTC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTSGGGTTTC
T ss_pred HHhhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhcCHhhCcCC
Confidence 0 1246799999999999999999999999999999998653
|
| >4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-59 Score=456.81 Aligned_cols=257 Identities=27% Similarity=0.428 Sum_probs=210.6
Q ss_pred cccccccccccccccCCeEEEEEEEc---cCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeC
Q 042823 20 DVMLHYFFGRMLGRGQFGVSYLCTEN---STNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDE 96 (477)
Q Consensus 20 ~~~~~Y~~~~~iG~G~~g~V~~~~~~---~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~ 96 (477)
.+.++|++++.||+|+||+||+|+++ .+++.||+|++.+.. ....+.+|++++..+.+|||||+++++|+++
T Consensus 18 ~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~-----~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~ 92 (361)
T 4f9c_A 18 QLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS-----HPIRIAAELQCLTVAGGQDNVMGVKYCFRKN 92 (361)
T ss_dssp GGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS-----CHHHHHHHHHHHHHTCSBTTBCCCSEEEEET
T ss_pred CccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc-----CHHHHHHHHHHHHHhcCCCCCceEEEEEEEC
Confidence 56789999999999999999999875 467899999986542 2346788999999997899999999999999
Q ss_pred CeEEEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccc
Q 042823 97 TAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALL 176 (477)
Q Consensus 97 ~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~ 176 (477)
+++|+|||||+||+|.+++ +.+++.+++.+++||+.||.|||++||+||||||+|||+. ...+.+||+|||+|+.
T Consensus 93 ~~~~lvmE~~~g~~L~~~~---~~l~~~~~~~~~~qll~al~ylH~~gIiHRDiKPeNiLl~--~~~~~~kl~DFGla~~ 167 (361)
T 4f9c_A 93 DHVVIAMPYLEHESFLDIL---NSLSFQEVREYMLNLFKALKRIHQFGIVHRDVKPSNFLYN--RRLKKYALVDFGLAQG 167 (361)
T ss_dssp TEEEEEEECCCCCCHHHHH---TTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEE--TTTTEEEECCCTTCEE
T ss_pred CEEEEEEeCCCcccHHHHH---cCCCHHHHHHHHHHHHHHHHHHHHCCeEeCcCCHHHeEEe--CCCCeEEECcCCCCcc
Confidence 9999999999999999988 4589999999999999999999999999999999999982 2337899999999975
Q ss_pred cCCCc-----------------------------ceecccccccccchhhhhh--hcCCccchHhHHHHHHHHhhCCCCC
Q 042823 177 FEEGQ-----------------------------VYRDIVGSGFYIAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPF 225 (477)
Q Consensus 177 ~~~~~-----------------------------~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~l~tg~~pf 225 (477)
..... .....+||+.|+|||++.+ .|+.++||||+|||+|+|+||++||
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf 247 (361)
T 4f9c_A 168 THDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPF 247 (361)
T ss_dssp CTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSS
T ss_pred cCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCC
Confidence 43221 1234579999999999875 4899999999999999999999999
Q ss_pred CCCCh-hhHHHHHHcC--------------------------------------C------------ccCCCCCCCCCCH
Q 042823 226 WAETK-KGTYDAILQG--------------------------------------E------------IDFDTDPWPSISS 254 (477)
Q Consensus 226 ~~~~~-~~~~~~i~~~--------------------------------------~------------~~~~~~~~~~~~~ 254 (477)
...++ .+.+..+... . .......|+.+|+
T Consensus 248 ~~~~~~~~~l~~I~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~is~ 327 (361)
T 4f9c_A 248 YKASDDLTALAQIMTIRGSRETIQAAKTFGKSILCSKEVPAQDLRKLCERLRGMDSSTPKLTSDIQGHATNLEGWNEVPD 327 (361)
T ss_dssp SCCSSHHHHHHHHHHHHCHHHHHHHHHHTTEEEEESSCCCCCCHHHHHHHHC----------------------CTTCCH
T ss_pred CCCCCHHHHHHHHHHhcCCccchhhhhhccccccccccCcchhhhHHHHhhccccccccccccccccccccccccccCCH
Confidence 65543 3333322210 0 0011224567899
Q ss_pred HHHHHHHHhcccCccccCCHHHHhcCcccCcC
Q 042823 255 TAKDLVRRMLTKDPKRRITAAQVLEHPWLRES 286 (477)
Q Consensus 255 ~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~ 286 (477)
++++||++||++||++|||++|+|+||||++.
T Consensus 328 ~a~DLl~~lL~~dP~~R~ta~eaL~Hp~f~~i 359 (361)
T 4f9c_A 328 EAYDLLDKLLDLNPASRITAEEALLHPFFKDM 359 (361)
T ss_dssp HHHHHHHHHTCSCTTTSCCHHHHHTSGGGTTC
T ss_pred HHHHHHHHHCcCChhHCcCHHHHhcCcccCCC
Confidence 99999999999999999999999999999863
|
| >3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-59 Score=481.75 Aligned_cols=267 Identities=32% Similarity=0.569 Sum_probs=243.1
Q ss_pred ccccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeC
Q 042823 17 AYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDE 96 (477)
Q Consensus 17 ~~~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~ 96 (477)
..+++.++|++++.||+|+||+||+|.++.+|+.||+|++.+.. ......+.+|+.++..+ +|||||+++++|+++
T Consensus 151 ~~~~il~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~---~~~~~~~~~Ei~il~~l-~hpnIv~l~~~~~~~ 226 (573)
T 3uto_A 151 KHDHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPH---ESDKETVRKEIQTMSVL-RHPTLVNLHDAFEDD 226 (573)
T ss_dssp BSSCGGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS---HHHHHHHHHHHHHHHHT-CCTTBCCEEEEEECS
T ss_pred CCCcCccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccc---hhhHHHHHHHHHHHHhC-CCCCCCeEEEEEEEC
Confidence 34567789999999999999999999999999999999997543 23456788999999999 799999999999999
Q ss_pred CeEEEEEeccCCCchHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCcc
Q 042823 97 TAVHVVMELCEGGDLFDRIIA-KGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSAL 175 (477)
Q Consensus 97 ~~~~lv~e~~~gg~L~~~l~~-~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~ 175 (477)
..+|||||||+||+|.+++.. .+.+++.+++.+++||+.||.|||++||+||||||+|||+.. +..+.+||+|||+|.
T Consensus 227 ~~~~iv~E~~~gg~L~~~i~~~~~~l~e~~~~~~~~qi~~al~ylH~~~iiHRDlKp~Nill~~-~~~~~vKl~DFG~a~ 305 (573)
T 3uto_A 227 NEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTT-KRSNELKLIDFGLTA 305 (573)
T ss_dssp SEEEEEEECCCCCBHHHHHTCTTSCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESS-SSCCCEEECCCSSCE
T ss_pred CEEEEEEeecCCCcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhccccC-CCCCCEEEeecccee
Confidence 999999999999999999964 467999999999999999999999999999999999999832 234789999999999
Q ss_pred ccCCCcceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCCCCH
Q 042823 176 LFEEGQVYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISS 254 (477)
Q Consensus 176 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 254 (477)
...........+||+.|||||++.+ .|+.++|||||||++|+|++|.+||.+.+..+.+..+......++...|+.+|+
T Consensus 306 ~~~~~~~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~ 385 (573)
T 3uto_A 306 HLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISE 385 (573)
T ss_dssp ECCTTSEEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCCCSGGGTTSCH
T ss_pred EccCCCceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHhCCCCCCcccccCCCH
Confidence 8887777778899999999999976 599999999999999999999999999999999999999988888888889999
Q ss_pred HHHHHHHHhcccCccccCCHHHHhcCcccCcCCC
Q 042823 255 TAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGE 288 (477)
Q Consensus 255 ~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~~~ 288 (477)
++++||.+||++||.+|||+.|+|+||||+....
T Consensus 386 ~~~dli~~~L~~dp~~R~t~~e~l~Hpw~~~~~~ 419 (573)
T 3uto_A 386 DGKDFIRKLLLADPNTRMTIHQALEHPWLTPGNA 419 (573)
T ss_dssp HHHHHHHTTSCSSGGGSCCHHHHHHSTTTSCCCC
T ss_pred HHHHHHHHHccCChhHCcCHHHHhcCcCcCCCCC
Confidence 9999999999999999999999999999987543
|
| >4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-59 Score=446.82 Aligned_cols=254 Identities=26% Similarity=0.439 Sum_probs=201.3
Q ss_pred cccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCC----
Q 042823 22 MLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDET---- 97 (477)
Q Consensus 22 ~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~---- 97 (477)
..+|++++.||+|+||+||+|+++.+|+.||||++.... .......+.+|+.++.++ +|||||+++++|.+.+
T Consensus 4 l~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~--~~~~~~~~~~E~~il~~l-~HpnIV~~~~~~~~~~~~~~ 80 (299)
T 4g31_A 4 LTDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPN--RELAREKVMREVKALAKL-EHPGIVRYFNAWLEKNTTEK 80 (299)
T ss_dssp HHHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECS--SHHHHHHHHHHHHHHTTC-CCTTBCCEEEEEEEEC----
T ss_pred chhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccC--CHHHHHHHHHHHHHHHhC-CCCCCCeEEEEEEecCcccc
Confidence 457999999999999999999999999999999997543 234456788999999999 7999999999997544
Q ss_pred --------eEEEEEeccCCCchHHHHHHcCCC---CHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCE
Q 042823 98 --------AVHVVMELCEGGDLFDRIIAKGYN---SERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALL 166 (477)
Q Consensus 98 --------~~~lv~e~~~gg~L~~~l~~~~~~---~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~ 166 (477)
++|||||||+||+|.+++...+.+ ++..++.++.||+.||.|||++||+||||||+|||+ +.++.+
T Consensus 81 ~~~~~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~~IiHRDlKp~NILl---~~~~~v 157 (299)
T 4g31_A 81 LQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFF---TMDDVV 157 (299)
T ss_dssp ------CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE---CTTCCE
T ss_pred ccccCCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHCcCccccCcHHHeEE---CCCCcE
Confidence 479999999999999999876654 456688999999999999999999999999999999 778899
Q ss_pred EEeecCCccccCCCcc-------------eecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChh-
Q 042823 167 KVTDFGSALLFEEGQV-------------YRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKK- 231 (477)
Q Consensus 167 kl~Dfg~a~~~~~~~~-------------~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~- 231 (477)
||+|||+|+....... ..+.+||+.|||||++.+ .|+.++|||||||++|+|++ ||.+....
T Consensus 158 Kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~~~~ 234 (299)
T 4g31_A 158 KVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQMERV 234 (299)
T ss_dssp EECCCCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHHHHH
T ss_pred EEccCccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCccHHH
Confidence 9999999987643321 234579999999999975 69999999999999999996 77543221
Q ss_pred hHHHHHHcCCccCCCCCCCCCCHHHHHHHHHhcccCccccCCHHHHhcCcccCcCC
Q 042823 232 GTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESG 287 (477)
Q Consensus 232 ~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~~ 287 (477)
.....+..... + +.++..++.+.+||.+||++||++|||+.|+|+||||+...
T Consensus 235 ~~~~~~~~~~~--p-~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h~~~~~~~ 287 (299)
T 4g31_A 235 RTLTDVRNLKF--P-PLFTQKYPCEYVMVQDMLSPSPMERPEAINIIENAVFEDLD 287 (299)
T ss_dssp HHHHHHHTTCC--C-HHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGCCC-
T ss_pred HHHHHHhcCCC--C-CCCcccCHHHHHHHHHHcCCChhHCcCHHHHhcCHhhCCCC
Confidence 22233333222 1 12234577889999999999999999999999999998653
|
| >3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A | Back alignment and structure |
|---|
Probab=100.00 E-value=9.2e-59 Score=475.70 Aligned_cols=256 Identities=29% Similarity=0.448 Sum_probs=218.9
Q ss_pred cccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHH---HHHHHhccCCCCeeEEEEEEEeCCe
Q 042823 22 MLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRRE---IQIRLYLSGQPNVVEFKSTYEDETA 98 (477)
Q Consensus 22 ~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e---~~~~~~l~~hpniv~~~~~~~~~~~ 98 (477)
.++|++++.||+|+||+||+|+++.+|+.||+|++.+.............+| +.++..+ +|||||+++++|++++.
T Consensus 188 lddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~-~HP~IV~l~~~f~~~~~ 266 (689)
T 3v5w_A 188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTG-DCPFIVCMSYAFHTPDK 266 (689)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSS-CCTTBCCEEEEEECSSE
T ss_pred hHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhC-CCCCEeEEEEEEEECCE
Confidence 4689999999999999999999999999999999976432222222333344 4444455 79999999999999999
Q ss_pred EEEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccC
Q 042823 99 VHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFE 178 (477)
Q Consensus 99 ~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~ 178 (477)
+|||||||+||+|.++|.+.+.+++..++.++.||+.||.|||++|||||||||+|||+ +.++.+||+|||+|....
T Consensus 267 lylVmEy~~GGdL~~~l~~~~~l~E~~a~~y~~qIl~aL~yLH~~gIiHRDLKPeNILl---d~~G~vKL~DFGlA~~~~ 343 (689)
T 3v5w_A 267 LSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILL---DEHGHVRISDLGLACDFS 343 (689)
T ss_dssp EEEEECCCCSCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEE---CTTSCEEECCCTTCEECS
T ss_pred EEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHeEE---eCCCCEEecccceeeecC
Confidence 99999999999999999999999999999999999999999999999999999999999 888999999999998775
Q ss_pred CCcceecccccccccchhhhh-h-hcCCccchHhHHHHHHHHhhCCCCCCCCChh---hHHHHHHcCCccCCCCCCCCCC
Q 042823 179 EGQVYRDIVGSGFYIAPEVLR-R-RYGKEIDIWSAGVILYILLSGVPPFWAETKK---GTYDAILQGEIDFDTDPWPSIS 253 (477)
Q Consensus 179 ~~~~~~~~~gt~~y~aPE~~~-~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~---~~~~~i~~~~~~~~~~~~~~~~ 253 (477)
... ..+.+|||.|||||++. + .|+.++|||||||++|+|++|.+||.+.+.. .....+......+ ++.+|
T Consensus 344 ~~~-~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~~i~~~i~~~~~~~----p~~~S 418 (689)
T 3v5w_A 344 KKK-PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVEL----PDSFS 418 (689)
T ss_dssp SCC-CCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHHHHHHHHHHCCCCC----CTTSC
T ss_pred CCC-CCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCC----CccCC
Confidence 543 35679999999999995 3 5999999999999999999999999765332 3344555544433 35789
Q ss_pred HHHHHHHHHhcccCccccCC-----HHHHhcCcccCcC
Q 042823 254 STAKDLVRRMLTKDPKRRIT-----AAQVLEHPWLRES 286 (477)
Q Consensus 254 ~~~~~li~~~l~~dp~~R~s-----~~~~l~h~~~~~~ 286 (477)
+++++||.+||++||.+|++ ++++++||||+..
T Consensus 419 ~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~HpfF~~i 456 (689)
T 3v5w_A 419 PELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSL 456 (689)
T ss_dssp HHHHHHHHHHTCSCGGGCTTCSSSTHHHHTTSGGGTTC
T ss_pred HHHHHHHHHHccCCHhHCCCCCCCCHHHHhcCccccCC
Confidence 99999999999999999998 7999999999864
|
| >4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.2e-58 Score=432.88 Aligned_cols=247 Identities=21% Similarity=0.327 Sum_probs=213.6
Q ss_pred cccccccccccccCCeEEEEEEEc-----cCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeC
Q 042823 22 MLHYFFGRMLGRGQFGVSYLCTEN-----STNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDE 96 (477)
Q Consensus 22 ~~~Y~~~~~iG~G~~g~V~~~~~~-----~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~ 96 (477)
.++|.+.+.||+|+||+||+|++. .++..||||++... .......+.+|+.++.++ +|||||++++++.++
T Consensus 12 r~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~---~~~~~~~f~~E~~il~~l-~HpnIV~l~g~~~~~ 87 (299)
T 4asz_A 12 RHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDA---SDNARKDFHREAELLTNL-QHEHIVKFYGVCVEG 87 (299)
T ss_dssp GGGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSC---CHHHHHHHHHHHHHHTTC-CCTTBCCEEEEECSS
T ss_pred HHHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCC---ChHHHHHHHHHHHHHHhC-CCCCCccEEEEEeeC
Confidence 467999999999999999999875 35788999998643 234567799999999999 799999999999999
Q ss_pred CeEEEEEeccCCCchHHHHHHc-------------CCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCC
Q 042823 97 TAVHVVMELCEGGDLFDRIIAK-------------GYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDN 163 (477)
Q Consensus 97 ~~~~lv~e~~~gg~L~~~l~~~-------------~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~ 163 (477)
+.+|||||||+||+|.++|... ..+++.++..++.||+.||.|||+++||||||||+|||+ +.+
T Consensus 88 ~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDlKp~NILl---~~~ 164 (299)
T 4asz_A 88 DPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLV---GEN 164 (299)
T ss_dssp SSEEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE---CGG
T ss_pred CEEEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCccCHhhEEE---CCC
Confidence 9999999999999999999764 368999999999999999999999999999999999999 778
Q ss_pred CCEEEeecCCccccCCCcce---ecccccccccchhhhh-hhcCCccchHhHHHHHHHHhh-CCCCCCCCChhhHHHHHH
Q 042823 164 ALLKVTDFGSALLFEEGQVY---RDIVGSGFYIAPEVLR-RRYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAIL 238 (477)
Q Consensus 164 ~~~kl~Dfg~a~~~~~~~~~---~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~l~t-g~~pf~~~~~~~~~~~i~ 238 (477)
+.+||+|||+|+........ ....||+.|||||++. +.|+.++|||||||++|||+| |++||.+.+..+....+.
T Consensus 165 ~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~~i~ 244 (299)
T 4asz_A 165 LLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECIT 244 (299)
T ss_dssp GCEEECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHH
T ss_pred CcEEECCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHH
Confidence 89999999999865443322 2346899999999987 469999999999999999999 999999999888888888
Q ss_pred cCCccCCCCCCCCCCHHHHHHHHHhcccCccccCCHHHHh
Q 042823 239 QGEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVL 278 (477)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l 278 (477)
.+.... ..+.+|+++.+|+.+||+.||++|||+.+++
T Consensus 245 ~~~~~~---~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~ 281 (299)
T 4asz_A 245 QGRVLQ---RPRTCPQEVYELMLGCWQREPHMRKNIKGIH 281 (299)
T ss_dssp HTCCCC---CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred cCCCCC---CCccchHHHHHHHHHHcCCChhHCcCHHHHH
Confidence 775422 2246899999999999999999999999984
|
| >3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-57 Score=431.11 Aligned_cols=255 Identities=20% Similarity=0.315 Sum_probs=209.8
Q ss_pred ccccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeC
Q 042823 17 AYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDE 96 (477)
Q Consensus 17 ~~~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~ 96 (477)
.|+.-.+++.+.+.||+|+||+||+|+++ ..||||++.... ........+.+|+.++.++ +|||||++++++..
T Consensus 30 ~Wei~~~~l~l~~~iG~G~fG~Vy~~~~~---~~vAvK~~~~~~-~~~~~~~~f~~E~~il~~l-~HpNIV~l~g~~~~- 103 (307)
T 3omv_A 30 YWEIEASEVMLSTRIGSGSFGTVYKGKWH---GDVAVKILKVVD-PTPEQFQAFRNEVAVLRKT-RHVNILLFMGYMTK- 103 (307)
T ss_dssp CCBCCTTSCCEEEECCCCSSSEEEEEESS---SEEEEEECCCSS-CCHHHHHHHHHHHHHHTTC-CCTTBCCEEEEECS-
T ss_pred CcEEcHHHeEEeeEEeeCCCcEEEEEEEC---CcEEEEEEEecC-CCHHHHHHHHHHHHHHHhC-CCCCEeeEEEEEEC-
Confidence 45666788999999999999999999864 359999986433 3345567899999999999 79999999998754
Q ss_pred CeEEEEEeccCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCcc
Q 042823 97 TAVHVVMELCEGGDLFDRIIAK-GYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSAL 175 (477)
Q Consensus 97 ~~~~lv~e~~~gg~L~~~l~~~-~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~ 175 (477)
+.+|||||||+||+|.++|... +.+++.++..++.||+.||.|||+++||||||||+|||+ +.++.+||+|||+|+
T Consensus 104 ~~~~iVmEy~~gGsL~~~l~~~~~~l~~~~~~~i~~qia~gL~yLH~~~IiHRDlKp~NILl---~~~~~~Ki~DFGla~ 180 (307)
T 3omv_A 104 DNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFL---HEGLTVKIGDFGLAT 180 (307)
T ss_dssp SSCEEEEECCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCSSSEEE---ETTEEEEECCCSSCB
T ss_pred CeEEEEEEcCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCccCCccCHHHEEE---CCCCcEEEeeccCce
Confidence 5689999999999999999764 579999999999999999999999999999999999999 778899999999998
Q ss_pred ccCCC---cceecccccccccchhhhhh----hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCC--C
Q 042823 176 LFEEG---QVYRDIVGSGFYIAPEVLRR----RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFD--T 246 (477)
Q Consensus 176 ~~~~~---~~~~~~~gt~~y~aPE~~~~----~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~--~ 246 (477)
..... ......+||+.|||||++.+ .|+.++|||||||++|||+||.+||.+.+.......+.......+ .
T Consensus 181 ~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~~~~~~~~~~~~p~~~ 260 (307)
T 3omv_A 181 VKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPDLS 260 (307)
T ss_dssp C------------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHTTCCCCCST
T ss_pred ecccCCcceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHHHHHHHHhcCCCCCCcc
Confidence 65432 23345689999999999863 489999999999999999999999988766555554444332222 2
Q ss_pred CCCCCCCHHHHHHHHHhcccCccccCCHHHHhcC
Q 042823 247 DPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEH 280 (477)
Q Consensus 247 ~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h 280 (477)
..++.+|+++.+|+.+||+.||++|||+.+++++
T Consensus 261 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~ 294 (307)
T 3omv_A 261 KLYKNCPKAMKRLVADCVKKVKEERPLFPQILSS 294 (307)
T ss_dssp TSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHH
T ss_pred cccccchHHHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence 3346789999999999999999999999987543
|
| >4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-56 Score=429.80 Aligned_cols=249 Identities=20% Similarity=0.309 Sum_probs=209.3
Q ss_pred cccccccccccccCCeEEEEEEEc-----cCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeC
Q 042823 22 MLHYFFGRMLGRGQFGVSYLCTEN-----STNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDE 96 (477)
Q Consensus 22 ~~~Y~~~~~iG~G~~g~V~~~~~~-----~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~ 96 (477)
.++|.+.+.||+|+||+||+|+++ .+++.||||++... .......+.+|+.++.++ +|||||++++++.+.
T Consensus 40 ~~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~---~~~~~~~f~~E~~il~~l-~HpnIV~l~g~~~~~ 115 (329)
T 4aoj_A 40 RRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEA---SESARQDFQREAELLTML-QHQHIVRFFGVCTEG 115 (329)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCC---SHHHHHHHHHHHHHHTTC-CCTTBCCEEEEECSS
T ss_pred HHHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcC---CHHHHHHHHHHHHHHHhC-CCCCCCcEEEEEEEC
Confidence 456888999999999999999865 36889999998643 334567899999999999 799999999999999
Q ss_pred CeEEEEEeccCCCchHHHHHHc---------------CCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecC
Q 042823 97 TAVHVVMELCEGGDLFDRIIAK---------------GYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRD 161 (477)
Q Consensus 97 ~~~~lv~e~~~gg~L~~~l~~~---------------~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~ 161 (477)
+.+|||||||+||+|.+++.+. +.+++.++..++.||+.||.|||+++||||||||+|||+ +
T Consensus 116 ~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLKp~NILl---~ 192 (329)
T 4aoj_A 116 RPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLV---G 192 (329)
T ss_dssp SSEEEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE---E
T ss_pred CEEEEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHhhEEE---C
Confidence 9999999999999999999753 358999999999999999999999999999999999999 7
Q ss_pred CCCCEEEeecCCccccCCCc---ceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhh-CCCCCCCCChhhHHHH
Q 042823 162 DNALLKVTDFGSALLFEEGQ---VYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDA 236 (477)
Q Consensus 162 ~~~~~kl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~t-g~~pf~~~~~~~~~~~ 236 (477)
.++.+||+|||+|+...... .....+||+.|||||++.+ .|+.++|||||||++|||+| |++||.+.+..+....
T Consensus 193 ~~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~~ 272 (329)
T 4aoj_A 193 QGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDC 272 (329)
T ss_dssp TTTEEEECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHHHHHHH
T ss_pred CCCcEEEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCHHHHHHH
Confidence 78899999999998664332 2234679999999999875 69999999999999999999 9999999988888888
Q ss_pred HHcCCccCCCCCCCCCCHHHHHHHHHhcccCccccCCHHHHhcC
Q 042823 237 ILQGEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEH 280 (477)
Q Consensus 237 i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h 280 (477)
+..+... +..+.+|+++.+|+.+||+.||++|||+.+++++
T Consensus 273 i~~g~~~---~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~ 313 (329)
T 4aoj_A 273 ITQGREL---ERPRACPPEVYAIMRGCWQREPQQRHSIKDVHAR 313 (329)
T ss_dssp HHHTCCC---CCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHH
T ss_pred HHcCCCC---CCcccccHHHHHHHHHHcCcChhHCcCHHHHHHH
Confidence 8776422 2224689999999999999999999999999753
|
| >2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B | Back alignment and structure |
|---|
Probab=100.00 E-value=8.9e-56 Score=434.02 Aligned_cols=304 Identities=34% Similarity=0.643 Sum_probs=262.0
Q ss_pred CCccccccccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEE
Q 042823 11 DPILGKAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFK 90 (477)
Q Consensus 11 ~~~~~~~~~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~ 90 (477)
..++......+.++|.+.+.||+|+||.||+|.++.+++.||+|++..... .......+.+|+.++..+ +||||++++
T Consensus 17 ~~~~~~~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~-~~~~~~~~~~E~~il~~l-~hpnIv~~~ 94 (362)
T 2bdw_A 17 SEFMMNASTKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKL-SARDFQKLEREARICRKL-QHPNIVRLH 94 (362)
T ss_dssp -------CCHHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-CHHHHHHHHHHHHHHHHC-CCTTBCCEE
T ss_pred ceEeecCCCCcccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccC-CHHHHHHHHHHHHHHHhC-CCCCCCeEE
Confidence 344556667888999999999999999999999999999999999976533 334567788999999999 799999999
Q ss_pred EEEEeCCeEEEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEee
Q 042823 91 STYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTD 170 (477)
Q Consensus 91 ~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~D 170 (477)
+++.+.+..|+|||||+||+|.+++...+.+++..+..++.||+.||.|||++||+||||||+||++...+..+.+||+|
T Consensus 95 ~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~~~~~~kl~D 174 (362)
T 2bdw_A 95 DSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLAD 174 (362)
T ss_dssp EEEECSSEEEEEECCCCSCBHHHHHTTCSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEESCSSTTCCEEECC
T ss_pred EEEEeCCEEEEEEecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCCCCCCEEEee
Confidence 99999999999999999999999999888899999999999999999999999999999999999996555556799999
Q ss_pred cCCccccCCCcceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCC
Q 042823 171 FGSALLFEEGQVYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPW 249 (477)
Q Consensus 171 fg~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~ 249 (477)
||++.............||+.|+|||++.+ .|+.++|||||||++|+|++|.+||.+.+.......+..+...++...|
T Consensus 175 fG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~ 254 (362)
T 2bdw_A 175 FGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEW 254 (362)
T ss_dssp CTTCBCCTTCCSCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTGG
T ss_pred cCcceEecCCcccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCcccc
Confidence 999988766555566789999999999876 6899999999999999999999999998888888899998888888788
Q ss_pred CCCCHHHHHHHHHhcccCccccCCHHHHhcCcccCcCC---CCCCchHHHHHHHHHhhhhHHHHhhhhhh
Q 042823 250 PSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESG---EASDDTSVILRMKQFRRMNKLKKLTIKVI 316 (477)
Q Consensus 250 ~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~~~~~~~i 316 (477)
+.+|+++++||.+||+.||++|||+.++|+||||.... ...........+++|...++++...+..+
T Consensus 255 ~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 324 (362)
T 2bdw_A 255 DTVTPEAKSLIDSMLTVNPKKRITADQALKVPWICNRERVASAIHRQDTVDCLKKFNARRKLKGAILTTM 324 (362)
T ss_dssp GGSCHHHHHHHHHHSCSSGGGSCCHHHHTTSHHHHTHHHHSCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcccCCCcccccccchhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 88999999999999999999999999999999997532 22234456677788887777777665443
|
| >3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=7e-56 Score=444.84 Aligned_cols=298 Identities=37% Similarity=0.681 Sum_probs=262.4
Q ss_pred cccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCC
Q 042823 18 YEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDET 97 (477)
Q Consensus 18 ~~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~ 97 (477)
...+.++|++.+.||+|+||+||+|.++.+|+.||+|++..... .......+.+|+.+++.+ +||||+++++++.+++
T Consensus 6 ~~~~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~-~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~ 83 (444)
T 3soa_A 6 CTRFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKL-SARDHQKLEREARICRLL-KHPNIVRLHDSISEEG 83 (444)
T ss_dssp -CHHHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSC-HHHHHHHHHHHHHHHHHC-CBTTBCCEEEEEECSS
T ss_pred cccccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccC-CHHHHHHHHHHHHHHHhC-CCcCCCeEEEEEEECC
Confidence 45678899999999999999999999999999999999976543 334556788999999999 7999999999999999
Q ss_pred eEEEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCcccc
Q 042823 98 AVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLF 177 (477)
Q Consensus 98 ~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~ 177 (477)
..|+|||||+||+|.+++...+.+++..+..++.||+.||.|||++||+||||||+||++......+.+||+|||++...
T Consensus 84 ~~~lv~E~~~gg~L~~~i~~~~~~~e~~~~~i~~qil~aL~~lH~~givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~ 163 (444)
T 3soa_A 84 HHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEV 163 (444)
T ss_dssp EEEEEECCCBCCBHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSSTTEEESBSSTTCCEEECCCSSCBCC
T ss_pred EEEEEEEeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEeccCCCCcEEEccCceeEEe
Confidence 99999999999999999999999999999999999999999999999999999999999965546788999999999876
Q ss_pred CCCc-ceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCCCCHH
Q 042823 178 EEGQ-VYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISST 255 (477)
Q Consensus 178 ~~~~-~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 255 (477)
.... ......||+.|+|||++.+ .|+.++|||||||++|+|++|.+||.+.+.......+..+...++.+.|+.+|++
T Consensus 164 ~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~ 243 (444)
T 3soa_A 164 EGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPE 243 (444)
T ss_dssp CTTCCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCCCCTTTTTTSCHH
T ss_pred cCCCceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhCCCCCCccccccCCHH
Confidence 5433 3355789999999999976 6999999999999999999999999999999999999999999988889999999
Q ss_pred HHHHHHHhcccCccccCCHHHHhcCcccCcCC---CCCCchHHHHHHHHHhhhhHHHHhhhhhhh
Q 042823 256 AKDLVRRMLTKDPKRRITAAQVLEHPWLRESG---EASDDTSVILRMKQFRRMNKLKKLTIKVIV 317 (477)
Q Consensus 256 ~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~ 317 (477)
+++||.+||+.||.+|||+.++|+||||+... ...........+++|...++++......+.
T Consensus 244 ~~~li~~~L~~dP~~Rpta~e~L~hp~~~~~~~~~~~~~~~~~~~~l~~~~~~~klk~~~~~~~~ 308 (444)
T 3soa_A 244 AKDLINKMLTINPSKRITAAEALKHPWISHRSTVASCMHRQETVDCLKKFNARRKLKGAILTVML 308 (444)
T ss_dssp HHHHHHHHSCSSTTTSCCHHHHHHSCTTHHHHHHSCCCCCHHHHHHHHHHHHHHHHHTTCSCEEC
T ss_pred HHHHHHHHcCCChhHCCCHHHHhcCccccCCccccccchhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999997542 222345667788899999999888776654
|
| >4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-56 Score=425.40 Aligned_cols=253 Identities=21% Similarity=0.303 Sum_probs=216.7
Q ss_pred ccccccccccccccccCCeEEEEEEEc-----cCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEE
Q 042823 19 EDVMLHYFFGRMLGRGQFGVSYLCTEN-----STNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTY 93 (477)
Q Consensus 19 ~~~~~~Y~~~~~iG~G~~g~V~~~~~~-----~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~ 93 (477)
+.-..++++.+.||+|+||+||+|.+. .+++.||||++.... .....+.+.+|+.++.++ +|||||++++++
T Consensus 22 ei~~~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~--~~~~~~~f~~E~~il~~l-~HpNIV~l~g~~ 98 (308)
T 4gt4_A 22 EISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKA--EGPLREEFRHEAMLRARL-QHPNVVCLLGVV 98 (308)
T ss_dssp BCCGGGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-C--CC-CHHHHHHHHHHHHHC-CCTTBCCEEEEE
T ss_pred cCCHHHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECccc--ChHHHHHHHHHHHHHHhC-CCCCCCCcceEE
Confidence 344567889999999999999999863 467899999986443 223456799999999999 799999999999
Q ss_pred EeCCeEEEEEeccCCCchHHHHHHc----------------CCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceee
Q 042823 94 EDETAVHVVMELCEGGDLFDRIIAK----------------GYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSF 157 (477)
Q Consensus 94 ~~~~~~~lv~e~~~gg~L~~~l~~~----------------~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~ 157 (477)
.+++.+|||||||++|+|.++|... ..+++.++..++.||+.||.|||+++||||||||+|||+
T Consensus 99 ~~~~~~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLK~~NILl 178 (308)
T 4gt4_A 99 TKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLV 178 (308)
T ss_dssp CSSSSCEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE
T ss_pred EECCEEEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCccccceEE
Confidence 9999999999999999999999753 358999999999999999999999999999999999999
Q ss_pred eecCCCCCEEEeecCCccccCCCc---ceecccccccccchhhhh-hhcCCccchHhHHHHHHHHhh-CCCCCCCCChhh
Q 042823 158 ISRDDNALLKVTDFGSALLFEEGQ---VYRDIVGSGFYIAPEVLR-RRYGKEIDIWSAGVILYILLS-GVPPFWAETKKG 232 (477)
Q Consensus 158 ~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~l~t-g~~pf~~~~~~~ 232 (477)
++++.+||+|||+|+...... .....+||+.|||||++. +.|+.++|||||||++|||+| |.+||.+.+..+
T Consensus 179 ---~~~~~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~~ 255 (308)
T 4gt4_A 179 ---YDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQD 255 (308)
T ss_dssp ---CGGGCEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCHHH
T ss_pred ---CCCCCEEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCHHH
Confidence 778899999999998654322 233468999999999986 469999999999999999998 899999999888
Q ss_pred HHHHHHcCCccCCCCCCCCCCHHHHHHHHHhcccCccccCCHHHHhcC
Q 042823 233 TYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEH 280 (477)
Q Consensus 233 ~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h 280 (477)
....+..+... +..+.+|+++.+|+.+||+.||++|||+.+++++
T Consensus 256 ~~~~i~~~~~~---~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~ 300 (308)
T 4gt4_A 256 VVEMIRNRQVL---PCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSR 300 (308)
T ss_dssp HHHHHHTTCCC---CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHHHcCCCC---CCcccchHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence 88888776532 2235789999999999999999999999999864
|
| >4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-56 Score=431.79 Aligned_cols=256 Identities=21% Similarity=0.318 Sum_probs=214.5
Q ss_pred ccccccccccccccccccCCeEEEEEEEccCC-----ceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEE
Q 042823 17 AYEDVMLHYFFGRMLGRGQFGVSYLCTENSTN-----RPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKS 91 (477)
Q Consensus 17 ~~~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~-----~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~ 91 (477)
.|+...++|++++.||+|+||+||+|.+..++ +.||+|.+.... .......+.+|+.++.++.+|||||++++
T Consensus 58 ~wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~--~~~~~~~~~~E~~il~~l~hhpnIV~l~g 135 (353)
T 4ase_A 58 KWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA--THSEHRALMSELKILIHIGHHLNVVNLLG 135 (353)
T ss_dssp HHBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTC--CHHHHHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred ccEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEcccc--ChHHHHHHHHHHHHHHHcCCCCcEEEEEE
Confidence 45667789999999999999999999986543 679999886543 23456678999999999976799999999
Q ss_pred EEEe-CCeEEEEEeccCCCchHHHHHHc----------------CCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCc
Q 042823 92 TYED-ETAVHVVMELCEGGDLFDRIIAK----------------GYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPEN 154 (477)
Q Consensus 92 ~~~~-~~~~~lv~e~~~gg~L~~~l~~~----------------~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~N 154 (477)
++.. ++.+|||||||+||+|.++|... ..+++.++..++.||+.||.|||+++||||||||+|
T Consensus 136 ~~~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~~iiHRDLK~~N 215 (353)
T 4ase_A 136 ACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARN 215 (353)
T ss_dssp EECCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGG
T ss_pred EEEecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhCCeecCccCccc
Confidence 9865 46799999999999999999763 347899999999999999999999999999999999
Q ss_pred eeeeecCCCCCEEEeecCCccccCCCcc---eecccccccccchhhhhh-hcCCccchHhHHHHHHHHhh-CCCCCCCCC
Q 042823 155 FSFISRDDNALLKVTDFGSALLFEEGQV---YRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLS-GVPPFWAET 229 (477)
Q Consensus 155 il~~~~~~~~~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~t-g~~pf~~~~ 229 (477)
||+ +.++.+||+|||+|+....... ....+||+.|||||++.+ .|+.++|||||||++|||+| |.+||.+..
T Consensus 216 ILl---~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~ 292 (353)
T 4ase_A 216 ILL---SEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVK 292 (353)
T ss_dssp EEE---CGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCC
T ss_pred eee---CCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCC
Confidence 999 7788999999999987644322 234578999999999874 69999999999999999998 999998876
Q ss_pred hhhHH-HHHHcCCccCCCCCCCCCCHHHHHHHHHhcccCccccCCHHHHhcC
Q 042823 230 KKGTY-DAILQGEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEH 280 (477)
Q Consensus 230 ~~~~~-~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h 280 (477)
....+ ..+..+.. .+ ..+.+|+++.+++.+||+.||++|||+.++++|
T Consensus 293 ~~~~~~~~i~~g~~-~~--~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~ 341 (353)
T 4ase_A 293 IDEEFCRRLKEGTR-MR--APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 341 (353)
T ss_dssp CSHHHHHHHHHTCC-CC--CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHHHHHHHcCCC-CC--CCccCCHHHHHHHHHHcCcChhHCcCHHHHHHH
Confidence 54444 44444432 22 224689999999999999999999999999986
|
| >2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-55 Score=428.44 Aligned_cols=269 Identities=36% Similarity=0.620 Sum_probs=240.6
Q ss_pred ccccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccc---hhhHHHHHHHHHHHHhccCCCCeeEEEEEE
Q 042823 17 AYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMR---LAENDMIRREIQIRLYLSGQPNVVEFKSTY 93 (477)
Q Consensus 17 ~~~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~---~~~~~~~~~e~~~~~~l~~hpniv~~~~~~ 93 (477)
....+.++|.+++.||+|+||+||+|.++.+|+.||+|++.+..... ......+.+|+.++..+ +||||+++++++
T Consensus 6 ~~~~~~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~ 84 (361)
T 2yab_A 6 KQQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQV-LHPNIITLHDVY 84 (361)
T ss_dssp BCSCGGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTC-CCTTBCCEEEEE
T ss_pred cCCChhhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhC-CCcCCCcEEEEE
Confidence 34578889999999999999999999999999999999997654321 12356788999999999 699999999999
Q ss_pred EeCCeEEEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCC-CCCEEEeecC
Q 042823 94 EDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDD-NALLKVTDFG 172 (477)
Q Consensus 94 ~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~-~~~~kl~Dfg 172 (477)
.+...+|+|||||+||+|.+++...+.+++..+..++.||+.||.|||++||+||||||+||++...+. ...+||+|||
T Consensus 85 ~~~~~~~lv~e~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~~~~vkl~DFG 164 (361)
T 2yab_A 85 ENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFG 164 (361)
T ss_dssp ECSSEEEEEEECCCSCBHHHHHTTCSCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTTSSSCCEEECCCS
T ss_pred EeCCEEEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEeCCCCCccCEEEEecC
Confidence 999999999999999999999988889999999999999999999999999999999999999832211 1279999999
Q ss_pred CccccCCCcceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCC
Q 042823 173 SALLFEEGQVYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPS 251 (477)
Q Consensus 173 ~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 251 (477)
++............+||+.|+|||++.+ .|+.++|||||||++|+|++|.+||.+.+..+....+..+...++...|+.
T Consensus 165 ~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 244 (361)
T 2yab_A 165 LAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQ 244 (361)
T ss_dssp SCEECCTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCCCHHHHTT
T ss_pred CceEcCCCCccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCchhccC
Confidence 9988766655567789999999999875 689999999999999999999999999999999999999888877777788
Q ss_pred CCHHHHHHHHHhcccCccccCCHHHHhcCcccCcC
Q 042823 252 ISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRES 286 (477)
Q Consensus 252 ~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~ 286 (477)
+|+.+++||.+||..||.+|||+.++|+||||+..
T Consensus 245 ~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~ 279 (361)
T 2yab_A 245 TSELAKDFIRKLLVKETRKRLTIQEALRHPWITPV 279 (361)
T ss_dssp SCHHHHHHHHHHSCSSTTTSCCHHHHHTSTTTSCS
T ss_pred CCHHHHHHHHHHCCCChhHCcCHHHHhcCcCcCCC
Confidence 99999999999999999999999999999999754
|
| >1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-55 Score=423.84 Aligned_cols=262 Identities=31% Similarity=0.597 Sum_probs=237.1
Q ss_pred cccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeE
Q 042823 20 DVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAV 99 (477)
Q Consensus 20 ~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~ 99 (477)
.+.++|++.+.||+|+||+||+|.++.+++.||+|++.... .....+.+|+.++..+ +||||+++++++.+...+
T Consensus 2 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~----~~~~~~~~E~~~l~~l-~hpnIv~~~~~~~~~~~~ 76 (321)
T 1tki_A 2 ELYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG----TDQVLVKKEISILNIA-RHRNILHLHESFESMEEL 76 (321)
T ss_dssp CCTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT----HHHHHHHHHHHHHHHS-CCTTBCCEEEEEEETTEE
T ss_pred chhhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCc----ccHHHHHHHHHHHHhC-CCCCCCeEeEEEecCCEE
Confidence 57789999999999999999999999999999999986432 3456688999999999 799999999999999999
Q ss_pred EEEEeccCCCchHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccC
Q 042823 100 HVVMELCEGGDLFDRIIAKG-YNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFE 178 (477)
Q Consensus 100 ~lv~e~~~gg~L~~~l~~~~-~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~ 178 (477)
|+|||||+||+|.+++.... .+++.+++.++.||+.||.|||++||+||||||+||++.. ..++.+||+|||++....
T Consensus 77 ~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~givH~Dlkp~NIl~~~-~~~~~~kl~Dfg~a~~~~ 155 (321)
T 1tki_A 77 VMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQT-RRSSTIKIIEFGQARQLK 155 (321)
T ss_dssp EEEECCCCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESS-SSCCCEEECCCTTCEECC
T ss_pred EEEEEeCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEcc-CCCCCEEEEECCCCeECC
Confidence 99999999999999997654 6999999999999999999999999999999999999832 126889999999998887
Q ss_pred CCcceecccccccccchhhhhhh-cCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCCCCHHHH
Q 042823 179 EGQVYRDIVGSGFYIAPEVLRRR-YGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAK 257 (477)
Q Consensus 179 ~~~~~~~~~gt~~y~aPE~~~~~-~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 257 (477)
.........||+.|+|||++.+. ++.++|||||||++|+|++|.+||.+.+.......+..+...++...|+.+|++++
T Consensus 156 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~ 235 (321)
T 1tki_A 156 PGDNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISIEAM 235 (321)
T ss_dssp TTCEEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCCCHHHHTTSCHHHH
T ss_pred CCCccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHcCCCCCChhhhccCCHHHH
Confidence 66666677899999999999764 79999999999999999999999999999999999998888777767788999999
Q ss_pred HHHHHhcccCccccCCHHHHhcCcccCcCC
Q 042823 258 DLVRRMLTKDPKRRITAAQVLEHPWLRESG 287 (477)
Q Consensus 258 ~li~~~l~~dp~~R~s~~~~l~h~~~~~~~ 287 (477)
+||.+||..||.+|||+.++|+||||+...
T Consensus 236 ~li~~~L~~dp~~Rpt~~e~l~hp~~~~~~ 265 (321)
T 1tki_A 236 DFVDRLLVKERKSRMTASEALQHPWLKQKI 265 (321)
T ss_dssp HHHHTTSCSSGGGSCCHHHHHHSHHHHSCG
T ss_pred HHHHHHcCCChhHCcCHHHHhcChhhccCc
Confidence 999999999999999999999999998653
|
| >3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-54 Score=415.37 Aligned_cols=261 Identities=32% Similarity=0.559 Sum_probs=234.8
Q ss_pred cccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCC
Q 042823 18 YEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDET 97 (477)
Q Consensus 18 ~~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~ 97 (477)
.....++|++.+.||+|+||.||+|.+..+|+.||+|++.+... .......+.+|+++++.+ +||||+++++++.+.+
T Consensus 10 ~~~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~~ 87 (328)
T 3fe3_A 10 EQPHIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQL-NPTSLQKLFREVRIMKIL-NHPNIVKLFEVIETEK 87 (328)
T ss_dssp -CCEETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGS-CHHHHHHHHHHHHHHHHC-CCTTBCCEEEEEECSS
T ss_pred cCCccCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcC-CHHHHHHHHHHHHHHHhC-CCCCEeeEEEEEEECC
Confidence 34556789999999999999999999999999999999976432 334567788999999999 7999999999999999
Q ss_pred eEEEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCcccc
Q 042823 98 AVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLF 177 (477)
Q Consensus 98 ~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~ 177 (477)
.+|+||||++||+|.+++...+.+++.+++.++.||+.||.|||++||+||||||+||++ +.++.+||+|||++...
T Consensus 88 ~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~NIll---~~~~~~kl~DFG~a~~~ 164 (328)
T 3fe3_A 88 TLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLL---DADMNIKIADFGFSNEF 164 (328)
T ss_dssp EEEEEECCCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE---CTTSCEEECSTTCCGGG
T ss_pred EEEEEEECCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEeccCCCHHHEEE---cCCCCEEEeeccCceec
Confidence 999999999999999999999999999999999999999999999999999999999999 78889999999999877
Q ss_pred CCCcceecccccccccchhhhhhh-c-CCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCCCCHH
Q 042823 178 EEGQVYRDIVGSGFYIAPEVLRRR-Y-GKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISST 255 (477)
Q Consensus 178 ~~~~~~~~~~gt~~y~aPE~~~~~-~-~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 255 (477)
.........+||+.|+|||++.+. + +.++||||+||++|+|++|.+||.+.+.......+..+....+ ..+|++
T Consensus 165 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~p----~~~s~~ 240 (328)
T 3fe3_A 165 TVGGKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIP----FYMSTD 240 (328)
T ss_dssp SSSCGGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCC----TTSCHH
T ss_pred CCCCccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCC----CCCCHH
Confidence 666666677899999999999754 4 5789999999999999999999999988888888888766544 357999
Q ss_pred HHHHHHHhcccCccccCCHHHHhcCcccCcCC
Q 042823 256 AKDLVRRMLTKDPKRRITAAQVLEHPWLRESG 287 (477)
Q Consensus 256 ~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~~ 287 (477)
+.+||.+||+.||.+|||+.++++||||+...
T Consensus 241 ~~~li~~~L~~dP~~R~t~~eil~h~~~~~~~ 272 (328)
T 3fe3_A 241 CENLLKRFLVLNPIKRGTLEQIMKDRWINAGH 272 (328)
T ss_dssp HHHHHHHHCCSSTTTSCCHHHHTTCTTTTTTC
T ss_pred HHHHHHHHCCCChhHCcCHHHHhcCHhhcCCC
Confidence 99999999999999999999999999998653
|
| >3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-54 Score=419.98 Aligned_cols=261 Identities=29% Similarity=0.476 Sum_probs=227.5
Q ss_pred ccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCe
Q 042823 19 EDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETA 98 (477)
Q Consensus 19 ~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~ 98 (477)
..-.++|++++.||+|+||.||+|+++.+++.||+|++.+...........+.+|..++..+.+||||+++++++.+...
T Consensus 19 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~ 98 (353)
T 3txo_A 19 RLGIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDR 98 (353)
T ss_dssp ----CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSE
T ss_pred CCchhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCE
Confidence 34457899999999999999999999999999999999765333334556778899999988789999999999999999
Q ss_pred EEEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccC
Q 042823 99 VHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFE 178 (477)
Q Consensus 99 ~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~ 178 (477)
+|+|||||+||+|.+++.+.+.+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+|....
T Consensus 99 ~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NILl---~~~g~ikL~DFG~a~~~~ 175 (353)
T 3txo_A 99 LFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFLHDKGIIYRDLKLDNVLL---DHEGHCKLADFGMCKEGI 175 (353)
T ss_dssp EEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEE---CTTSCEEECCCTTCBCSC
T ss_pred EEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCHHHEEE---CCCCCEEEccccceeecc
Confidence 99999999999999999999999999999999999999999999999999999999999 788899999999998643
Q ss_pred -CCcceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCCCCHHH
Q 042823 179 -EGQVYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTA 256 (477)
Q Consensus 179 -~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 256 (477)
........+||+.|+|||++.+ .|+.++|||||||++|+|++|.+||.+.+..+.+..+..+...++ ..+++.+
T Consensus 176 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~~~p----~~~~~~~ 251 (353)
T 3txo_A 176 CNGVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVYP----TWLHEDA 251 (353)
T ss_dssp C---------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCC----TTSCHHH
T ss_pred cCCccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCC----CCCCHHH
Confidence 2333456789999999999875 599999999999999999999999999999999999988876654 3579999
Q ss_pred HHHHHHhcccCccccCCH------HHHhcCcccCcC
Q 042823 257 KDLVRRMLTKDPKRRITA------AQVLEHPWLRES 286 (477)
Q Consensus 257 ~~li~~~l~~dp~~R~s~------~~~l~h~~~~~~ 286 (477)
.+||++||++||.+||++ .++++||||+..
T Consensus 252 ~~li~~lL~~dP~~R~~~~~~~~~~~il~hp~f~~~ 287 (353)
T 3txo_A 252 TGILKSFMTKNPTMRLGSLTQGGEHAILRHPFFKEI 287 (353)
T ss_dssp HHHHHHHTCSSGGGSTTSGGGTCTHHHHTSGGGTTC
T ss_pred HHHHHHHhhhCHHHccCCcccCCHHHHhhCCcccCC
Confidence 999999999999999999 899999999864
|
| >3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.7e-54 Score=419.35 Aligned_cols=299 Identities=32% Similarity=0.587 Sum_probs=241.1
Q ss_pred cccccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCcc--chhhHHHHHHHHHHHHhccCCCCeeEEEEEE
Q 042823 16 KAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKM--RLAENDMIRREIQIRLYLSGQPNVVEFKSTY 93 (477)
Q Consensus 16 ~~~~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~--~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~ 93 (477)
.....+.++|++.+.||+|+||+||+|.++.+++.||+|++...... .......+.+|+.++..+ +||||+++++++
T Consensus 17 ~~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~~~~~~ 95 (351)
T 3c0i_A 17 DDDVLFEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHML-KHPHIVELLETY 95 (351)
T ss_dssp ---CCHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHC-CCTTBCCEEEEE
T ss_pred CCCCccccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhC-CCCCCCcEEEEE
Confidence 34456778999999999999999999999999999999998643211 112356788999999999 799999999999
Q ss_pred EeCCeEEEEEeccCCCchHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEe
Q 042823 94 EDETAVHVVMELCEGGDLFDRIIAK----GYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVT 169 (477)
Q Consensus 94 ~~~~~~~lv~e~~~gg~L~~~l~~~----~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~ 169 (477)
.+.+.+|+|||||+||+|.+++... ..+++..++.++.||+.||.|||++||+||||||+||++...+....+||+
T Consensus 96 ~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivHrDlkp~NIl~~~~~~~~~vkl~ 175 (351)
T 3c0i_A 96 SSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLG 175 (351)
T ss_dssp EETTEEEEEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECSSSTTCCEEEC
T ss_pred EeCCEEEEEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCChHHeEEecCCCCCcEEEe
Confidence 9999999999999999998888653 358999999999999999999999999999999999999554455669999
Q ss_pred ecCCccccCCCcc-eecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCC
Q 042823 170 DFGSALLFEEGQV-YRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTD 247 (477)
Q Consensus 170 Dfg~a~~~~~~~~-~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~ 247 (477)
|||++........ ....+||+.|+|||++.+ .++.++|||||||++|+|++|.+||.+. .......+..+...++..
T Consensus 176 Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~-~~~~~~~i~~~~~~~~~~ 254 (351)
T 3c0i_A 176 GFGVAIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGT-KERLFEGIIKGKYKMNPR 254 (351)
T ss_dssp CCTTCEECCTTSCBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSS-HHHHHHHHHHTCCCCCHH
T ss_pred cCcceeEecCCCeeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCc-HHHHHHHHHcCCCCCCcc
Confidence 9999987654432 345689999999999875 5899999999999999999999999874 456667777777666655
Q ss_pred CCCCCCHHHHHHHHHhcccCccccCCHHHHhcCcccCcCCC---CCCchHHHHHHHHHhhhhHHHHhhhhhh
Q 042823 248 PWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGE---ASDDTSVILRMKQFRRMNKLKKLTIKVI 316 (477)
Q Consensus 248 ~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~~~---~~~~~~~~~~~~~~~~~~~l~~~~~~~i 316 (477)
.|+.+|+++++||.+||+.||++|||+.++|+||||+.... .........+++++...++++......+
T Consensus 255 ~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~hp~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 326 (351)
T 3c0i_A 255 QWSHISESAKDLVRRMLMLDPAERITVYEALNHPWLKERDRYAYKIHLPETVEQLRKFNARRKLKGAVLAAV 326 (351)
T ss_dssp HHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHTHHHHSCCSCCHHHHHHHHHHHHHHC---------
T ss_pred ccccCCHHHHHHHHHHCCCChhHCcCHHHHhcChhhcCCccccccccchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66789999999999999999999999999999999986421 1223445566667766666666554443
|
| >2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-53 Score=411.98 Aligned_cols=295 Identities=38% Similarity=0.691 Sum_probs=237.6
Q ss_pred cccccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEe
Q 042823 16 KAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYED 95 (477)
Q Consensus 16 ~~~~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~ 95 (477)
...+.+.++|.+.+.||+|+||.||+|.++.+++.||+|++.... ....+.+|+.++..+ .||||+++++++.+
T Consensus 46 ~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~-----~~~~~~~E~~~l~~l-~h~niv~~~~~~~~ 119 (349)
T 2w4o_A 46 SNRDALSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV-----DKKIVRTEIGVLLRL-SHPNIIKLKEIFET 119 (349)
T ss_dssp SBCSCGGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC---------------CHHHHHC-CCTTBCCEEEEEEC
T ss_pred cccccccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch-----hHHHHHHHHHHHHhC-CCCCCcceeeeEec
Confidence 345678889999999999999999999999999999999987542 235677899999999 69999999999999
Q ss_pred CCeEEEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCcc
Q 042823 96 ETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSAL 175 (477)
Q Consensus 96 ~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~ 175 (477)
...+|+||||++||+|.+++...+.+++.++..++.||+.||.|||++||+||||||+||++...+..+.+||+|||++.
T Consensus 120 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~ 199 (349)
T 2w4o_A 120 PTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLSK 199 (349)
T ss_dssp SSEEEEEECCCCSCBHHHHHTTCSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESSSSTTCCEEECCCC---
T ss_pred CCeEEEEEEeCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCcccEEEecCCCCCCEEEccCcccc
Confidence 99999999999999999999988889999999999999999999999999999999999999544457899999999998
Q ss_pred ccCCCcceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChhh-HHHHHHcCCccCCCCCCCCCC
Q 042823 176 LFEEGQVYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKG-TYDAILQGEIDFDTDPWPSIS 253 (477)
Q Consensus 176 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~-~~~~i~~~~~~~~~~~~~~~~ 253 (477)
............||+.|+|||++.+ .++.++|||||||++|+|++|..||....... ....+......+..+.++.++
T Consensus 200 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 279 (349)
T 2w4o_A 200 IVEHQVLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEYYFISPWWDEVS 279 (349)
T ss_dssp -------------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHHHHHHHHTTCCCCCTTTTTTSC
T ss_pred ccCcccccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccHHHHHHHHhCCCccCCchhhhCC
Confidence 7665544556789999999999875 58999999999999999999999998765544 666777777777666778899
Q ss_pred HHHHHHHHHhcccCccccCCHHHHhcCcccCcCCCCC-CchHHHHHHHHHhhhhHHHHhhhhhh
Q 042823 254 STAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEAS-DDTSVILRMKQFRRMNKLKKLTIKVI 316 (477)
Q Consensus 254 ~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~i 316 (477)
+++++||.+||+.||++|||+.++|+||||....... .......+++++...+++++......
T Consensus 280 ~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (349)
T 2w4o_A 280 LNAKDLVRKLIVLDPKKRLTTFQALQHPWVTGKAANFVHMDTAQKKLQEFNARRKLKAAVKAVV 343 (349)
T ss_dssp HHHHHHHHTTSCSSGGGSCCHHHHHHSTTTTSTTCCCSCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHccCChhhCcCHHHHhcCcccCCCccchhhhcchHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999998765443 24455566777877777777655444
|
| >2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-53 Score=412.42 Aligned_cols=268 Identities=38% Similarity=0.650 Sum_probs=236.8
Q ss_pred cccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccc---hhhHHHHHHHHHHHHhccCCCCeeEEEEEEE
Q 042823 18 YEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMR---LAENDMIRREIQIRLYLSGQPNVVEFKSTYE 94 (477)
Q Consensus 18 ~~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~---~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~ 94 (477)
.+.+.++|.+.+.||+|+||.||+|.++.+++.||+|++.+..... ......+.+|+.++..+ +||||+++++++.
T Consensus 6 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~ 84 (326)
T 2y0a_A 6 QENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEI-QHPNVITLHEVYE 84 (326)
T ss_dssp CSCHHHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHC-CCTTBCCEEEEEE
T ss_pred cCCcccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhC-CCCCCCcEEEEEE
Confidence 3567789999999999999999999999999999999997654321 12356788999999999 7999999999999
Q ss_pred eCCeEEEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecC-CCCCEEEeecCC
Q 042823 95 DETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRD-DNALLKVTDFGS 173 (477)
Q Consensus 95 ~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~-~~~~~kl~Dfg~ 173 (477)
+...+|+|||||+||+|.+++...+.+++..+..++.||+.||.|||++||+||||||+||++...+ ....+||+|||+
T Consensus 85 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~ 164 (326)
T 2y0a_A 85 NKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL 164 (326)
T ss_dssp CSSEEEEEEECCCSCBHHHHHTTSSCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCSSSSSCCEEECCCTT
T ss_pred eCCEEEEEEEcCCCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHCCeEcCCCCHHHEEEecCCCCCCCEEEEECCC
Confidence 9999999999999999999998888899999999999999999999999999999999999993322 123799999999
Q ss_pred ccccCCCcceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCCC
Q 042823 174 ALLFEEGQVYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSI 252 (477)
Q Consensus 174 a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 252 (477)
+.............||+.|+|||++.+ .++.++|||||||++|+|++|.+||.+.........+......++...++.+
T Consensus 165 a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (326)
T 2y0a_A 165 AHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNT 244 (326)
T ss_dssp CEECCTTSCCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHTCCCCCHHHHTTS
T ss_pred CeECCCCCccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHhcCCCcCccccccC
Confidence 988765555566789999999999874 6899999999999999999999999998888888888877766665556788
Q ss_pred CHHHHHHHHHhcccCccccCCHHHHhcCcccCcC
Q 042823 253 SSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRES 286 (477)
Q Consensus 253 ~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~ 286 (477)
|+.+++||.+||+.||.+|||+.++|+||||+..
T Consensus 245 ~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~~ 278 (326)
T 2y0a_A 245 SALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPK 278 (326)
T ss_dssp CHHHHHHHHHHSCSSGGGSCCHHHHHHSTTTSCC
T ss_pred CHHHHHHHHHHccCChhhCCCHHHHhcCCCccCC
Confidence 9999999999999999999999999999999764
|
| >1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-53 Score=411.16 Aligned_cols=257 Identities=32% Similarity=0.526 Sum_probs=229.8
Q ss_pred cccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEE
Q 042823 22 MLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHV 101 (477)
Q Consensus 22 ~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~l 101 (477)
.++|++++.||+|+||.||+|+++.+|+.||+|++.+...........+.+|+.++..+ +||||+++++++.+.+.+|+
T Consensus 4 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~l~~~~~~~~~~~l 82 (337)
T 1o6l_A 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNT-RHPFLTALKYAFQTHDRLCF 82 (337)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSC-CCTTBCCEEEEEECSSEEEE
T ss_pred hHHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhC-CCCcCcceEEEEEeCCEEEE
Confidence 46899999999999999999999999999999999764322233456788999999998 79999999999999999999
Q ss_pred EEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccC-CC
Q 042823 102 VMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFE-EG 180 (477)
Q Consensus 102 v~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~-~~ 180 (477)
|||||+||+|.+++.+.+.+++..++.++.||+.||.|||++||+||||||+||++ +.++.+||+|||++.... ..
T Consensus 83 v~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll---~~~g~vkL~DFG~a~~~~~~~ 159 (337)
T 1o6l_A 83 VMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLML---DKDGHIKITDFGLCKEGISDG 159 (337)
T ss_dssp EEECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEE---CTTSCEEECCCTTCBCSCCTT
T ss_pred EEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCcCCHHHEEE---CCCCCEEEeeccchhhcccCC
Confidence 99999999999999998999999999999999999999999999999999999999 778899999999997642 33
Q ss_pred cceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCCCCHHHHHH
Q 042823 181 QVYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDL 259 (477)
Q Consensus 181 ~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l 259 (477)
......+||+.|+|||++.+ .|+.++|||||||++|+|++|.+||.+.+.......+......++ ..+|+++++|
T Consensus 160 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p----~~~s~~~~~l 235 (337)
T 1o6l_A 160 ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFP----RTLSPEAKSL 235 (337)
T ss_dssp CCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCC----TTSCHHHHHH
T ss_pred CcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCC----CCCCHHHHHH
Confidence 34456789999999999875 689999999999999999999999999888888888887766544 3689999999
Q ss_pred HHHhcccCccccC-----CHHHHhcCcccCcC
Q 042823 260 VRRMLTKDPKRRI-----TAAQVLEHPWLRES 286 (477)
Q Consensus 260 i~~~l~~dp~~R~-----s~~~~l~h~~~~~~ 286 (477)
|.+||+.||.+|| ++.++++||||+..
T Consensus 236 i~~lL~~dP~~R~g~~~~~~~ei~~h~~f~~~ 267 (337)
T 1o6l_A 236 LAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSI 267 (337)
T ss_dssp HHHHTCSSTTTSTTCSTTTHHHHHTSGGGTTC
T ss_pred HHHHhhcCHHHhcCCCCCCHHHHHcCCCcCCC
Confidence 9999999999999 99999999999764
|
| >3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-53 Score=415.32 Aligned_cols=260 Identities=33% Similarity=0.523 Sum_probs=209.9
Q ss_pred ccccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeC
Q 042823 17 AYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDE 96 (477)
Q Consensus 17 ~~~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~ 96 (477)
+.....++|++++.||+|+||+||+|+++.+++.||+|++...... ...+.+|+.+++.+ +||||+++++++.+.
T Consensus 14 ~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~----~~~~~~E~~~l~~l-~hpniv~~~~~~~~~ 88 (361)
T 3uc3_A 14 PIMHDSDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAI----DENVQREIINHRSL-RHPNIVRFKEVILTP 88 (361)
T ss_dssp CCCCCTTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTTS----CHHHHHHHHHHHHC-CCTTBCCEEEEEECS
T ss_pred cCCCCCCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCccc----cHHHHHHHHHHHhC-CCCCCCcEEEEEeeC
Confidence 4455678999999999999999999999999999999999754332 24577999999999 799999999999999
Q ss_pred CeEEEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCC--CEEEeecCCc
Q 042823 97 TAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNA--LLKVTDFGSA 174 (477)
Q Consensus 97 ~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~--~~kl~Dfg~a 174 (477)
..+|+|||||+||+|.+++...+.+++..++.++.||+.||.|||++||+||||||+||++ +..+ .+||+|||++
T Consensus 89 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~ql~~~L~~LH~~~ivH~Dlkp~Nill---~~~~~~~~kl~Dfg~a 165 (361)
T 3uc3_A 89 THLAIIMEYASGGELYERICNAGRFSEDEARFFFQQLLSGVSYCHSMQICHRDLKLENTLL---DGSPAPRLKICDFGYS 165 (361)
T ss_dssp SEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCSCCCCGGGEEE---CSSSSCCEEECCCCCC
T ss_pred CEEEEEEEeCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEE---cCCCCceEEEeecCcc
Confidence 9999999999999999999998899999999999999999999999999999999999998 4443 5999999999
Q ss_pred cccCCCcceecccccccccchhhhhh-hcCC-ccchHhHHHHHHHHhhCCCCCCCCChh----hHHHHHHcCCccCCCCC
Q 042823 175 LLFEEGQVYRDIVGSGFYIAPEVLRR-RYGK-EIDIWSAGVILYILLSGVPPFWAETKK----GTYDAILQGEIDFDTDP 248 (477)
Q Consensus 175 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~-~~DiwslG~il~~l~tg~~pf~~~~~~----~~~~~i~~~~~~~~~~~ 248 (477)
............+||+.|+|||++.+ .++. ++|||||||++|+|++|.+||.+.... .....+......++ .
T Consensus 166 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~--~ 243 (361)
T 3uc3_A 166 KSSVLHSQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYSIP--D 243 (361)
T ss_dssp ---------------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCCHHHHHHHHHTTCCCCC--T
T ss_pred ccccccCCCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhcCCCCCC--C
Confidence 76544444456689999999999865 4544 489999999999999999999875543 33344444444333 2
Q ss_pred CCCCCHHHHHHHHHhcccCccccCCHHHHhcCcccCcC
Q 042823 249 WPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRES 286 (477)
Q Consensus 249 ~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~ 286 (477)
...+|+.+++||.+||+.||.+|||+.++++||||...
T Consensus 244 ~~~~s~~~~~li~~~L~~dP~~Rps~~ell~hp~f~~~ 281 (361)
T 3uc3_A 244 DIRISPECCHLISRIFVADPATRISIPEIKTHSWFLKN 281 (361)
T ss_dssp TSCCCHHHHHHHHHHSCSCTTTSCCHHHHHTSHHHHTT
T ss_pred cCCCCHHHHHHHHHHccCChhHCcCHHHHHhCcchhcC
Confidence 34689999999999999999999999999999999654
|
| >4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-53 Score=416.63 Aligned_cols=260 Identities=28% Similarity=0.468 Sum_probs=225.0
Q ss_pred cccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeE
Q 042823 20 DVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAV 99 (477)
Q Consensus 20 ~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~ 99 (477)
.-.++|++++.||+|+||.||+|+++.+++.||+|++.+...........+.+|..++.++.+||||++++++|.+...+
T Consensus 49 ~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~ 128 (396)
T 4dc2_A 49 LGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRL 128 (396)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEE
T ss_pred CChhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEE
Confidence 34568999999999999999999999999999999998764443344456788999988887899999999999999999
Q ss_pred EEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCcccc-C
Q 042823 100 HVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLF-E 178 (477)
Q Consensus 100 ~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~-~ 178 (477)
|+|||||+||+|..++.+.+.+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+|... .
T Consensus 129 ~lV~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl---~~~g~ikL~DFGla~~~~~ 205 (396)
T 4dc2_A 129 FFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLL---DSEGHIKLTDYGMCKEGLR 205 (396)
T ss_dssp EEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEE---CTTSCEEECCCTTCBCCCC
T ss_pred EEEEEcCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEE---CCCCCEEEeecceeeeccc
Confidence 9999999999999999998999999999999999999999999999999999999999 78899999999999863 3
Q ss_pred CCcceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCC---------hhhHHHHHHcCCccCCCCC
Q 042823 179 EGQVYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAET---------KKGTYDAILQGEIDFDTDP 248 (477)
Q Consensus 179 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~---------~~~~~~~i~~~~~~~~~~~ 248 (477)
........+||+.|+|||++.+ .|+.++|||||||++|+|++|.+||.... .......+......++
T Consensus 206 ~~~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~p--- 282 (396)
T 4dc2_A 206 PGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIP--- 282 (396)
T ss_dssp TTCCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHHCCCCCC---
T ss_pred CCCccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhccccCCC---
Confidence 3444566789999999999875 58999999999999999999999996432 2334556666655544
Q ss_pred CCCCCHHHHHHHHHhcccCccccCCH------HHHhcCcccCcC
Q 042823 249 WPSISSTAKDLVRRMLTKDPKRRITA------AQVLEHPWLRES 286 (477)
Q Consensus 249 ~~~~~~~~~~li~~~l~~dp~~R~s~------~~~l~h~~~~~~ 286 (477)
+.+|+++++||++||+.||.+||++ .++++||||+..
T Consensus 283 -~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~ei~~Hpff~~i 325 (396)
T 4dc2_A 283 -RSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNV 325 (396)
T ss_dssp -TTSCHHHHHHHHHHTCSCTTTSTTCSTTTHHHHHHHSTTTTTC
T ss_pred -CcCCHHHHHHHHHHhcCCHhHcCCCCCCCCHHHHhcCccccCC
Confidence 3689999999999999999999985 799999999764
|
| >1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-53 Score=410.86 Aligned_cols=260 Identities=26% Similarity=0.437 Sum_probs=229.4
Q ss_pred cccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeE
Q 042823 20 DVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAV 99 (477)
Q Consensus 20 ~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~ 99 (477)
.-.++|.+.+.||+|+||.||+|+++.+++.||+|++.+...........+.+|..++..+.+||||+++++++++...+
T Consensus 14 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~ 93 (345)
T 1xjd_A 14 LKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENL 93 (345)
T ss_dssp --CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEE
T ss_pred CChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEE
Confidence 44578999999999999999999999999999999997643222234556778888888776899999999999999999
Q ss_pred EEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCC
Q 042823 100 HVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEE 179 (477)
Q Consensus 100 ~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~ 179 (477)
|+|||||+||+|.+++...+.+++..++.++.||+.||.|||++||+||||||+||++ +.++.+||+|||++.....
T Consensus 94 ~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll---~~~g~vkL~DFG~a~~~~~ 170 (345)
T 1xjd_A 94 FFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILL---DKDGHIKIADFGMCKENML 170 (345)
T ss_dssp EEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEE---CTTSCEEECCCTTCBCCCC
T ss_pred EEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCChhhEEE---CCCCCEEEeEChhhhhccc
Confidence 9999999999999999998899999999999999999999999999999999999999 7788999999999976432
Q ss_pred -Ccceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCCCCHHHH
Q 042823 180 -GQVYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAK 257 (477)
Q Consensus 180 -~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 257 (477)
.......+||+.|+|||++.+ .|+.++|||||||++|+|++|.+||.+.+.......+..+...++ ..+|++++
T Consensus 171 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p----~~~s~~~~ 246 (345)
T 1xjd_A 171 GDAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYP----RWLEKEAK 246 (345)
T ss_dssp TTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCC----TTSCHHHH
T ss_pred CCCcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHhCCCCCC----cccCHHHH
Confidence 233456789999999999875 589999999999999999999999999888888888887765543 35899999
Q ss_pred HHHHHhcccCccccCCHH-HHhcCcccCcC
Q 042823 258 DLVRRMLTKDPKRRITAA-QVLEHPWLRES 286 (477)
Q Consensus 258 ~li~~~l~~dp~~R~s~~-~~l~h~~~~~~ 286 (477)
+||.+||+.||++||++. ++++||||+..
T Consensus 247 ~li~~lL~~dp~~R~~~~~~i~~hp~f~~~ 276 (345)
T 1xjd_A 247 DLLVKLFVREPEKRLGVRGDIRQHPLFREI 276 (345)
T ss_dssp HHHHHHSCSSGGGSBTTBSCGGGSGGGTTC
T ss_pred HHHHHHhcCCHhHcCCChHHHHcCccccCC
Confidence 999999999999999998 99999999864
|
| >2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-53 Score=411.00 Aligned_cols=265 Identities=36% Similarity=0.604 Sum_probs=229.9
Q ss_pred ccccccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEE
Q 042823 15 GKAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYE 94 (477)
Q Consensus 15 ~~~~~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~ 94 (477)
......+.++|.+.+.||+|+||.||+|.++.+++.||+|++.+.... ..+|+.++.++.+||||+++++++.
T Consensus 14 ~~~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~-------~~~E~~~l~~~~~hp~iv~~~~~~~ 86 (342)
T 2qr7_A 14 HRNSIQFTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRD-------PTEEIEILLRYGQHPNIITLKDVYD 86 (342)
T ss_dssp -----CHHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTCC-------CHHHHHHHHHHTTSTTBCCEEEEEE
T ss_pred cccccCccccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccCC-------hHHHHHHHHHhcCCCCcCeEEEEEE
Confidence 345567889999999999999999999999999999999999765322 2467788888878999999999999
Q ss_pred eCCeEEEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCC-CCCEEEeecCC
Q 042823 95 DETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDD-NALLKVTDFGS 173 (477)
Q Consensus 95 ~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~-~~~~kl~Dfg~ 173 (477)
+...+|+|||||+||+|.+++...+.+++..+..++.||+.||.|||++||+||||||+||++...+. .+.+||+|||+
T Consensus 87 ~~~~~~lv~E~~~gg~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~ 166 (342)
T 2qr7_A 87 DGKYVYVVTELMKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGF 166 (342)
T ss_dssp CSSEEEEEECCCCSCBHHHHHHTCTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSSCSGGGEEECCCTT
T ss_pred cCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcEeccCCHHHEEEecCCCCcCeEEEEECCC
Confidence 99999999999999999999999889999999999999999999999999999999999999843322 24699999999
Q ss_pred ccccCCC-cceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCC---CChhhHHHHHHcCCccCCCCC
Q 042823 174 ALLFEEG-QVYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWA---ETKKGTYDAILQGEIDFDTDP 248 (477)
Q Consensus 174 a~~~~~~-~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~---~~~~~~~~~i~~~~~~~~~~~ 248 (477)
+...... ......+||+.|+|||++.+ .|+.++|||||||++|+|++|.+||.+ ....+....+..+...++...
T Consensus 167 a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~ 246 (342)
T 2qr7_A 167 AKQLRAENGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKFSLSGGY 246 (342)
T ss_dssp CEECBCTTCCBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCHHHHHHHHHHCCCCCCSTT
T ss_pred cccCcCCCCceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCHHHHHHHHccCCcccCccc
Confidence 9876433 33455689999999999875 589999999999999999999999986 345567778888888887778
Q ss_pred CCCCCHHHHHHHHHhcccCccccCCHHHHhcCcccCcC
Q 042823 249 WPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRES 286 (477)
Q Consensus 249 ~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~ 286 (477)
|+.+|+++++||.+||+.||++|||+.++++||||...
T Consensus 247 ~~~~s~~~~~li~~~L~~dP~~R~t~~~il~hp~~~~~ 284 (342)
T 2qr7_A 247 WNSVSDTAKDLVSKMLHVDPHQRLTAALVLRHPWIVHW 284 (342)
T ss_dssp TTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTSHHHHTG
T ss_pred cccCCHHHHHHHHHHCCCChhHCcCHHHHhcCCeecCc
Confidence 88999999999999999999999999999999999653
|
| >3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-52 Score=398.03 Aligned_cols=265 Identities=27% Similarity=0.434 Sum_probs=227.4
Q ss_pred cccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCC
Q 042823 18 YEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDET 97 (477)
Q Consensus 18 ~~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~ 97 (477)
.....++|++.+.||+|+||+||+|.+..+++.||+|++..... .....+.+|+.++..+ +||||+++++++...+
T Consensus 15 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~ 90 (297)
T 3fxz_A 15 VGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQ---PKKELIINEILVMREN-KNPNIVNYLDSYLVGD 90 (297)
T ss_dssp SSCGGGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGC---SCHHHHHHHHHHHHHC-CCTTBCCEEEEEEETT
T ss_pred cCChhhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccc---cHHHHHHHHHHHHhcC-CCCCCCeEeEEEEECC
Confidence 34567899999999999999999999999999999999875432 2345688999999999 7999999999999999
Q ss_pred eEEEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCcccc
Q 042823 98 AVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLF 177 (477)
Q Consensus 98 ~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~ 177 (477)
.+|+|||||+||+|.+++... .+++..++.++.|++.||.|||++||+||||||+||++ +.++.+||+|||++...
T Consensus 91 ~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~---~~~~~~kl~Dfg~~~~~ 166 (297)
T 3fxz_A 91 ELWVVMEYLAGGSLTDVVTET-CMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILL---GMDGSVKLTDFGFCAQI 166 (297)
T ss_dssp EEEEEEECCTTCBHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE---CTTCCEEECCCTTCEEC
T ss_pred EEEEEEECCCCCCHHHHHhhc-CCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEE---CCCCCEEEeeCCCceec
Confidence 999999999999999988765 58999999999999999999999999999999999999 77889999999998776
Q ss_pred CCCc-ceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCCCCHH
Q 042823 178 EEGQ-VYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISST 255 (477)
Q Consensus 178 ~~~~-~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 255 (477)
.... ......||+.|+|||++.+ .++.++|||||||++|+|++|..||...........+....... ....+.+++.
T Consensus 167 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 245 (297)
T 3fxz_A 167 TPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPE-LQNPEKLSAI 245 (297)
T ss_dssp CSTTCCBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHHCSCC-CSCGGGSCHH
T ss_pred CCcccccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCC-CCCccccCHH
Confidence 5433 3345689999999999875 58999999999999999999999998877766665554432221 1122468999
Q ss_pred HHHHHHHhcccCccccCCHHHHhcCcccCcCCCCCC
Q 042823 256 AKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASD 291 (477)
Q Consensus 256 ~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~~~~~~ 291 (477)
+.+||.+||+.||++|||+.++++||||+.....+.
T Consensus 246 ~~~li~~~l~~dp~~Rps~~ell~h~~~~~~~~~~~ 281 (297)
T 3fxz_A 246 FRDFLNRCLEMDVEKRGSAKELLQHQFLKIAKPLSS 281 (297)
T ss_dssp HHHHHHHHSCSSTTTSCCHHHHTTCGGGGGCCCGGG
T ss_pred HHHHHHHHccCChhHCcCHHHHhhChhhcccCcccc
Confidence 999999999999999999999999999987655443
|
| >3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-53 Score=399.63 Aligned_cols=266 Identities=40% Similarity=0.724 Sum_probs=241.2
Q ss_pred cccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCC
Q 042823 18 YEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDET 97 (477)
Q Consensus 18 ~~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~ 97 (477)
...+.++|++.+.||+|+||.||+|.++.++..+|+|++..... .....+.+|+.++..+ +||||+++++++.+..
T Consensus 4 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~---~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~ 79 (277)
T 3f3z_A 4 KGDINQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFV---EDVDRFKQEIEIMKSL-DHPNIIRLYETFEDNT 79 (277)
T ss_dssp --CHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGC---SCHHHHHHHHHHHHTC-CCTTBCCEEEEEECSS
T ss_pred hhhhhhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhcc---chHHHHHHHHHHHHhC-CCCCEeeEEEEEecCC
Confidence 45678899999999999999999999999999999999875432 2356788999999999 7999999999999999
Q ss_pred eEEEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCcccc
Q 042823 98 AVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLF 177 (477)
Q Consensus 98 ~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~ 177 (477)
..|+||||++|++|.+++...+.+++..+..++.|++.||.|||++||+||||||+||++...+..+.+||+|||++...
T Consensus 80 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~ 159 (277)
T 3f3z_A 80 DIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARF 159 (277)
T ss_dssp EEEEEEECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEEC
T ss_pred eEEEEEeccCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEecCCCCCcEEEEecccceec
Confidence 99999999999999999999899999999999999999999999999999999999999966667789999999999887
Q ss_pred CCCcceecccccccccchhhhhhhcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCCCCHHHH
Q 042823 178 EEGQVYRDIVGSGFYIAPEVLRRRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAK 257 (477)
Q Consensus 178 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 257 (477)
..........||+.|+|||++.+.++.++||||||+++|+|++|..||...........+..+...++...++.+|+.+.
T Consensus 160 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (277)
T 3f3z_A 160 KPGKMMRTKVGTPYYVSPQVLEGLYGPECDEWSAGVMMYVLLCGYPPFSAPTDSEVMLKIREGTFTFPEKDWLNVSPQAE 239 (277)
T ss_dssp CTTSCBCCCCSCTTTCCHHHHTTCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCHHHHTTSCHHHH
T ss_pred cCccchhccCCCCCccChHHhcccCCchhhehhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCchhhhcCCHHHH
Confidence 66666667789999999999998899999999999999999999999999888888888888877766655668899999
Q ss_pred HHHHHhcccCccccCCHHHHhcCcccCcCC
Q 042823 258 DLVRRMLTKDPKRRITAAQVLEHPWLRESG 287 (477)
Q Consensus 258 ~li~~~l~~dp~~R~s~~~~l~h~~~~~~~ 287 (477)
++|.+||+.||.+|||+.++|+||||++..
T Consensus 240 ~li~~~l~~dp~~R~s~~~~l~h~~~~~~~ 269 (277)
T 3f3z_A 240 SLIRRLLTKSPKQRITSLQALEHEWFEKQL 269 (277)
T ss_dssp HHHHHHTCSSTTTSCCHHHHTTSHHHHHHH
T ss_pred HHHHHHccCChhhCcCHHHHhcCHHHhccc
Confidence 999999999999999999999999997643
|
| >3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-52 Score=406.24 Aligned_cols=258 Identities=29% Similarity=0.482 Sum_probs=226.4
Q ss_pred cccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEE
Q 042823 22 MLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHV 101 (477)
Q Consensus 22 ~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~l 101 (477)
.++|++++.||+|+||.||+|+++.+++.||+|++.+...........+.+|..++..+.+||||+++++++.+...+|+
T Consensus 8 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~l 87 (345)
T 3a8x_A 8 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF 87 (345)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEE
Confidence 46899999999999999999999999999999999876554555667788999999888789999999999999999999
Q ss_pred EEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccC-CC
Q 042823 102 VMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFE-EG 180 (477)
Q Consensus 102 v~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~-~~ 180 (477)
|||||+||+|.+++.+.+.+++..++.++.||+.||.|||++||+||||||+||++ +.++.+||+|||++.... ..
T Consensus 88 v~e~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll---~~~g~~kL~DFG~a~~~~~~~ 164 (345)
T 3a8x_A 88 VIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLL---DSEGHIKLTDYGMCKEGLRPG 164 (345)
T ss_dssp EECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEE---CTTSCEEECCGGGCBCSCCTT
T ss_pred EEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEE---CCCCCEEEEeccccccccCCC
Confidence 99999999999999988899999999999999999999999999999999999999 788899999999997632 33
Q ss_pred cceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCC---------ChhhHHHHHHcCCccCCCCCCC
Q 042823 181 QVYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAE---------TKKGTYDAILQGEIDFDTDPWP 250 (477)
Q Consensus 181 ~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~---------~~~~~~~~i~~~~~~~~~~~~~ 250 (477)
......+||+.|+|||++.+ .|+.++|||||||++|+|++|.+||... ........+......++ +
T Consensus 165 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~p----~ 240 (345)
T 3a8x_A 165 DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIP----R 240 (345)
T ss_dssp CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHCCCCCC----T
T ss_pred CcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcCCCCCC----C
Confidence 34456789999999999875 6899999999999999999999999652 23344555666555443 3
Q ss_pred CCCHHHHHHHHHhcccCccccCCH------HHHhcCcccCcC
Q 042823 251 SISSTAKDLVRRMLTKDPKRRITA------AQVLEHPWLRES 286 (477)
Q Consensus 251 ~~~~~~~~li~~~l~~dp~~R~s~------~~~l~h~~~~~~ 286 (477)
.+|+++++||.+||+.||.+||++ .++++||||+..
T Consensus 241 ~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~~i~~hp~f~~~ 282 (345)
T 3a8x_A 241 SLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNV 282 (345)
T ss_dssp TSCHHHHHHHHHHTCSSTTTSTTCCTTTHHHHHHTSGGGTTC
T ss_pred CCCHHHHHHHHHHhcCCHhHCCCCCCcCCHHHHhcCCccCCC
Confidence 689999999999999999999995 899999999754
|
| >1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-52 Score=403.72 Aligned_cols=255 Identities=32% Similarity=0.557 Sum_probs=229.3
Q ss_pred cccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEE
Q 042823 22 MLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHV 101 (477)
Q Consensus 22 ~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~l 101 (477)
.++|++++.||+|+||.||+|+++.+|+.||+|++.+...........+.+|+.++..+ +||||+++++++.+...+|+
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~Iv~~~~~~~~~~~~~l 83 (318)
T 1fot_A 5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIV-THPFIIRMWGTFQDAQQIFM 83 (318)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSC-CBTTBCCEEEEEECSSEEEE
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhC-CCCCCceEeEEEEeCCEEEE
Confidence 46899999999999999999999999999999999764322223456778899999888 79999999999999999999
Q ss_pred EEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCCCc
Q 042823 102 VMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQ 181 (477)
Q Consensus 102 v~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~ 181 (477)
|||||+||+|.+++...+.+++..++.++.||+.||.|||++||+||||||+||++ +.++.+||+|||++......
T Consensus 84 v~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll---~~~g~~kL~Dfg~a~~~~~~- 159 (318)
T 1fot_A 84 IMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILL---DKNGHIKITDFGFAKYVPDV- 159 (318)
T ss_dssp EECCCCSCBHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEE---CTTSCEEECCCSSCEECSSC-
T ss_pred EEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChheEEE---cCCCCEEEeecCcceecCCc-
Confidence 99999999999999998899999999999999999999999999999999999999 78889999999999876442
Q ss_pred ceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCCCCHHHHHHH
Q 042823 182 VYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLV 260 (477)
Q Consensus 182 ~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li 260 (477)
....+||+.|+|||++.+ .++.++|||||||++|+|++|.+||.+.+....+..+......++ +.++++++++|
T Consensus 160 -~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~p----~~~~~~~~~li 234 (318)
T 1fot_A 160 -TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFP----PFFNEDVKDLL 234 (318)
T ss_dssp -BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHCCCCCC----TTSCHHHHHHH
T ss_pred -cccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCC----CCCCHHHHHHH
Confidence 345689999999999875 589999999999999999999999999888888888888766554 46799999999
Q ss_pred HHhcccCccccC-----CHHHHhcCcccCcC
Q 042823 261 RRMLTKDPKRRI-----TAAQVLEHPWLRES 286 (477)
Q Consensus 261 ~~~l~~dp~~R~-----s~~~~l~h~~~~~~ 286 (477)
.+||+.||.+|| +++++++||||+..
T Consensus 235 ~~lL~~dp~~R~~~~~~~~~~i~~hp~f~~~ 265 (318)
T 1fot_A 235 SRLITRDLSQRLGNLQNGTEDVKNHPWFKEV 265 (318)
T ss_dssp HHHTCSCTTTCTTSSTTTTHHHHTSGGGSSC
T ss_pred HHHhccCHHHcCCCcCCCHHHHhcCccccCC
Confidence 999999999999 99999999999864
|
| >3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-52 Score=395.12 Aligned_cols=267 Identities=36% Similarity=0.700 Sum_probs=242.2
Q ss_pred ccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCe
Q 042823 19 EDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETA 98 (477)
Q Consensus 19 ~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~ 98 (477)
..+.++|++.+.||+|+||.||+|.++.+++.||+|++..... .......+.+|+.++..+ +||||+++++++.....
T Consensus 2 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~ 79 (284)
T 3kk8_A 2 TKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKL-SARDFQKLEREARICRKL-QHPNIVRLHDSIQEESF 79 (284)
T ss_dssp CTTTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGC-CHHHHHHHHHHHHHHHHC-CCTTBCCEEEEEECSSE
T ss_pred chhhhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccC-CHHHHHHHHHHHHHHHHc-CCCCcCeEEEEEEcCCE
Confidence 3577899999999999999999999999999999999875432 334567788999999999 79999999999999999
Q ss_pred EEEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccC
Q 042823 99 VHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFE 178 (477)
Q Consensus 99 ~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~ 178 (477)
.|+||||++|++|.+.+.....+++..+..++.|++.||.|||++||+||||||+||++...+..+.+||+|||++....
T Consensus 80 ~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~ 159 (284)
T 3kk8_A 80 HYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN 159 (284)
T ss_dssp EEEEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSSTTCCEEECCCTTCEECC
T ss_pred EEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEcc
Confidence 99999999999999999999999999999999999999999999999999999999999555555679999999998776
Q ss_pred CCcceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCCCCHHHH
Q 042823 179 EGQVYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAK 257 (477)
Q Consensus 179 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 257 (477)
.........||+.|+|||++.+ .++.++||||||+++|+|++|..||.+.........+..+...++.+.++.+++++.
T Consensus 160 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (284)
T 3kk8_A 160 DSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAK 239 (284)
T ss_dssp SSCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTTTTTSCHHHH
T ss_pred cCccccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchhHHHHHHHhccccCCchhhcccCHHHH
Confidence 6655566789999999999875 589999999999999999999999999988888888888888888777888999999
Q ss_pred HHHHHhcccCccccCCHHHHhcCcccCcCC
Q 042823 258 DLVRRMLTKDPKRRITAAQVLEHPWLRESG 287 (477)
Q Consensus 258 ~li~~~l~~dp~~R~s~~~~l~h~~~~~~~ 287 (477)
+||.+||+.||++|||+.++++||||+...
T Consensus 240 ~li~~~l~~dp~~Rps~~~~l~h~~~~~~~ 269 (284)
T 3kk8_A 240 SLIDSMLTVNPKKRITADQALKVPWICNRE 269 (284)
T ss_dssp HHHHHHSCSSTTTSCCHHHHTTSHHHHSCC
T ss_pred HHHHHHcccChhhCCCHHHHhcCccccCCh
Confidence 999999999999999999999999998654
|
| >3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-53 Score=418.94 Aligned_cols=263 Identities=32% Similarity=0.515 Sum_probs=229.1
Q ss_pred cccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeE
Q 042823 20 DVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAV 99 (477)
Q Consensus 20 ~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~ 99 (477)
.-.++|.+++.||+|+||+||+|+++.+++.||+|++.+...........+.+|+.++..+ +||||++++++|.+...+
T Consensus 66 ~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l-~hp~Iv~l~~~~~~~~~~ 144 (410)
T 3v8s_A 66 MKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFA-NSPWVVQLFYAFQDDRYL 144 (410)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHC-CCTTBCCEEEEEECSSEE
T ss_pred cCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhC-CCCCCCeEEEEEEECCEE
Confidence 4457899999999999999999999999999999998753221112233467899999888 799999999999999999
Q ss_pred EEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCC
Q 042823 100 HVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEE 179 (477)
Q Consensus 100 ~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~ 179 (477)
|+|||||+||+|.+++.. ..+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+|.....
T Consensus 145 ~lV~E~~~gg~L~~~l~~-~~~~e~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl---~~~g~ikL~DFG~a~~~~~ 220 (410)
T 3v8s_A 145 YMVMEYMPGGDLVNLMSN-YDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLL---DKSGHLKLADFGTCMKMNK 220 (410)
T ss_dssp EEEECCCTTEEHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE---CTTSCEEECCCTTCEECCT
T ss_pred EEEEeCCCCCcHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeeE---CCCCCEEEeccceeEeecc
Confidence 999999999999998865 468999999999999999999999999999999999999 7889999999999987654
Q ss_pred Ccc--eecccccccccchhhhhhh-----cCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCCC
Q 042823 180 GQV--YRDIVGSGFYIAPEVLRRR-----YGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSI 252 (477)
Q Consensus 180 ~~~--~~~~~gt~~y~aPE~~~~~-----~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 252 (477)
... ....+||+.|+|||++.+. |+.++|||||||++|+|++|.+||.+.+....+..+..+...+..+.++.+
T Consensus 221 ~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~ 300 (410)
T 3v8s_A 221 EGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDI 300 (410)
T ss_dssp TSEEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHCCCCTTCCC
T ss_pred CCcccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChhhHHHHHHhccccccCCCcccc
Confidence 432 3467899999999998642 789999999999999999999999999988888888876544444445679
Q ss_pred CHHHHHHHHHhcccCccc--cCCHHHHhcCcccCcCC
Q 042823 253 SSTAKDLVRRMLTKDPKR--RITAAQVLEHPWLRESG 287 (477)
Q Consensus 253 ~~~~~~li~~~l~~dp~~--R~s~~~~l~h~~~~~~~ 287 (477)
|+++++||.+||+.+|.+ ||++.++++||||+...
T Consensus 301 s~~~~~li~~lL~~~~~rlgR~~~~ei~~Hp~f~~~~ 337 (410)
T 3v8s_A 301 SKEAKNLICAFLTDREVRLGRNGVEEIKRHLFFKNDQ 337 (410)
T ss_dssp CHHHHHHHHHHSSCGGGCTTSSCHHHHHTSGGGCCSS
T ss_pred cHHHHHHHHHHccChhhhCCCCCHHHHhcCccccCCC
Confidence 999999999999999988 99999999999998754
|
| >2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-52 Score=409.10 Aligned_cols=260 Identities=27% Similarity=0.465 Sum_probs=230.0
Q ss_pred cccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeE
Q 042823 20 DVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAV 99 (477)
Q Consensus 20 ~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~ 99 (477)
.-.++|.+++.||+|+||.||+|+++.+++.||+|++.+...........+.+|..++..+.+||||+++++++++.+.+
T Consensus 17 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~ 96 (353)
T 2i0e_A 17 MKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRL 96 (353)
T ss_dssp --CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEE
T ss_pred CchHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEE
Confidence 34568999999999999999999999999999999997643222234566788999988877899999999999999999
Q ss_pred EEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccC-
Q 042823 100 HVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFE- 178 (477)
Q Consensus 100 ~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~- 178 (477)
|+|||||+||+|.+++...+.+++..++.++.||+.||.|||++||+||||||+||++ +.++.+||+|||++....
T Consensus 97 ~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll---~~~g~vkL~DFG~a~~~~~ 173 (353)
T 2i0e_A 97 YFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVML---DSEGHIKIADFGMCKENIW 173 (353)
T ss_dssp EEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEE---CTTSCEEECCCTTCBCCCC
T ss_pred EEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEE---cCCCcEEEEeCCccccccc
Confidence 9999999999999999998899999999999999999999999999999999999999 788899999999998643
Q ss_pred CCcceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCCCCHHHH
Q 042823 179 EGQVYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAK 257 (477)
Q Consensus 179 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 257 (477)
........+||+.|+|||++.+ .++.++|||||||++|+|++|.+||.+.+....+..+......++ +.+|++++
T Consensus 174 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~~~p----~~~s~~~~ 249 (353)
T 2i0e_A 174 DGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYP----KSMSKEAV 249 (353)
T ss_dssp TTCCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCC----TTSCHHHH
T ss_pred CCcccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCHHHHHHHHHhCCCCCC----CCCCHHHH
Confidence 2334456789999999999874 689999999999999999999999999988888888888766554 36899999
Q ss_pred HHHHHhcccCccccCC-----HHHHhcCcccCcC
Q 042823 258 DLVRRMLTKDPKRRIT-----AAQVLEHPWLRES 286 (477)
Q Consensus 258 ~li~~~l~~dp~~R~s-----~~~~l~h~~~~~~ 286 (477)
+||.+||+.||.+||+ +.++++||||+..
T Consensus 250 ~li~~lL~~dP~~R~~~~~~~~~~i~~h~~f~~~ 283 (353)
T 2i0e_A 250 AICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYI 283 (353)
T ss_dssp HHHHHHTCSCTTSCTTCSTTHHHHHHTSGGGTTC
T ss_pred HHHHHHhhcCHHHcCCCCCCCHHHHhcCccccCC
Confidence 9999999999999994 6999999999754
|
| >4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-52 Score=411.04 Aligned_cols=267 Identities=25% Similarity=0.452 Sum_probs=230.4
Q ss_pred CccccccccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEE
Q 042823 12 PILGKAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKS 91 (477)
Q Consensus 12 ~~~~~~~~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~ 91 (477)
|..........++|++++.||+|+||.||+|.++.+++.||+|++.+...........+.+|+.++..+ +|||||++++
T Consensus 4 p~~~~~~~v~~~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~Iv~l~~ 82 (384)
T 4fr4_A 4 PVFDENEDVNFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGL-EHPFLVNLWY 82 (384)
T ss_dssp ----CCCCCCGGGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTC-CCTTBCCEEE
T ss_pred CccCCCCCCChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhC-CCCCCCcEEE
Confidence 344455566678999999999999999999999999999999999765433334456788999999999 7999999999
Q ss_pred EEEeCCeEEEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeec
Q 042823 92 TYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDF 171 (477)
Q Consensus 92 ~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Df 171 (477)
+|.+...+|+|||||.||+|.+++...+.+++..++.++.||+.||.|||++||+||||||+||++ +.++.+||+||
T Consensus 83 ~~~~~~~~~lv~e~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll---~~~g~vkL~DF 159 (384)
T 4fr4_A 83 SFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFICELVMALDYLQNQRIIHRDMKPDNILL---DEHGHVHITDF 159 (384)
T ss_dssp EEECSSEEEEEECCCTTEEHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE---CTTSCEEECCC
T ss_pred EEEeCCEEEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEE---CCCCCEEEecc
Confidence 999999999999999999999999998899999999999999999999999999999999999999 78889999999
Q ss_pred CCccccCCCcceecccccccccchhhhhh----hcCCccchHhHHHHHHHHhhCCCCCCCCCh---hhHHHHHHcCCccC
Q 042823 172 GSALLFEEGQVYRDIVGSGFYIAPEVLRR----RYGKEIDIWSAGVILYILLSGVPPFWAETK---KGTYDAILQGEIDF 244 (477)
Q Consensus 172 g~a~~~~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~DiwslG~il~~l~tg~~pf~~~~~---~~~~~~i~~~~~~~ 244 (477)
|++............+||+.|+|||++.+ .|+.++|||||||++|+|++|.+||..... ......+......+
T Consensus 160 G~a~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~ 239 (384)
T 4fr4_A 160 NIAAMLPRETQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFETTVVTY 239 (384)
T ss_dssp TTCEECCTTCCBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCHHHHHHHHHHCCCCC
T ss_pred ceeeeccCCCceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccHHHHHHHHhhcccCC
Confidence 99988766666677899999999999853 489999999999999999999999975433 33444444444433
Q ss_pred CCCCCCCCCHHHHHHHHHhcccCccccCC-HHHHhcCcccCcC
Q 042823 245 DTDPWPSISSTAKDLVRRMLTKDPKRRIT-AAQVLEHPWLRES 286 (477)
Q Consensus 245 ~~~~~~~~~~~~~~li~~~l~~dp~~R~s-~~~~l~h~~~~~~ 286 (477)
+ +.+|+.+.+||.+||+.||.+||+ ++++++||||...
T Consensus 240 p----~~~s~~~~~li~~lL~~dP~~R~s~~~~l~~hp~f~~~ 278 (384)
T 4fr4_A 240 P----SAWSQEMVSLLKKLLEPNPDQRFSQLSDVQNFPYMNDI 278 (384)
T ss_dssp C----TTSCHHHHHHHHHHSCSSGGGSCCSHHHHHTSGGGTTC
T ss_pred C----CcCCHHHHHHHHHHhcCCHhHhcccHHHHHcChhhhcC
Confidence 3 467999999999999999999998 8999999999864
|
| >3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-53 Score=411.27 Aligned_cols=258 Identities=31% Similarity=0.556 Sum_probs=222.8
Q ss_pred cccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeE
Q 042823 20 DVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAV 99 (477)
Q Consensus 20 ~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~ 99 (477)
...++|.+.+.||+|+||.||+|.+..+++.||+|++.+...........+.+|+.++..+ +||||+++++++.+...+
T Consensus 6 ~~i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~~~~ 84 (336)
T 3h4j_B 6 RHIGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLL-RHPHIIKLYDVITTPTDI 84 (336)
T ss_dssp SEETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTC-CCTTBCCEEEEEECSSEE
T ss_pred cccCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhC-CCCCCCeEEEEEEeCCEE
Confidence 3457899999999999999999999999999999998754322222345688999999998 799999999999999999
Q ss_pred EEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCC
Q 042823 100 HVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEE 179 (477)
Q Consensus 100 ~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~ 179 (477)
|+||||+ +|+|.+++...+.+++.+++.++.||+.||.|||++||+||||||+||++ +.++.+||+|||++.....
T Consensus 85 ~lv~E~~-~g~l~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll---~~~~~~kl~DFG~s~~~~~ 160 (336)
T 3h4j_B 85 VMVIEYA-GGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRHKIVHRDLKPENLLL---DDNLNVKIADFGLSNIMTD 160 (336)
T ss_dssp EEEECCC-CEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCSTTTEEE---CTTCCEEECCSSCTBTTTT
T ss_pred EEEEECC-CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCchhhEEE---cCCCCEEEEEeccceeccC
Confidence 9999999 67999999999999999999999999999999999999999999999999 7788999999999988776
Q ss_pred Ccceecccccccccchhhhhhh--cCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCCCCHHHH
Q 042823 180 GQVYRDIVGSGFYIAPEVLRRR--YGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAK 257 (477)
Q Consensus 180 ~~~~~~~~gt~~y~aPE~~~~~--~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 257 (477)
.......+||+.|+|||++.+. ++.++|||||||++|+|++|..||.+.........+..+.... .+.+|+.+.
T Consensus 161 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~----p~~~s~~~~ 236 (336)
T 3h4j_B 161 GNFLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKKVNSCVYVM----PDFLSPGAQ 236 (336)
T ss_dssp SBTTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTCBCCCCSSCCCC----CTTSCHHHH
T ss_pred CcccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHHHHHHHcCCCCC----cccCCHHHH
Confidence 6666677899999999998753 3789999999999999999999998765544433333222222 245799999
Q ss_pred HHHHHhcccCccccCCHHHHhcCcccCcC
Q 042823 258 DLVRRMLTKDPKRRITAAQVLEHPWLRES 286 (477)
Q Consensus 258 ~li~~~l~~dp~~R~s~~~~l~h~~~~~~ 286 (477)
+||.+||+.||.+|||+.++++||||+..
T Consensus 237 ~li~~~L~~dP~~Rpt~~eil~hp~~~~~ 265 (336)
T 3h4j_B 237 SLIRRMIVADPMQRITIQEIRRDPWFNVN 265 (336)
T ss_dssp HHHHTTSCSSGGGSCCHHHHTTCHHHHTT
T ss_pred HHHHHHcCCChhHCcCHHHHHhChhhccC
Confidence 99999999999999999999999999754
|
| >1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-52 Score=409.97 Aligned_cols=264 Identities=31% Similarity=0.571 Sum_probs=236.3
Q ss_pred ccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCe
Q 042823 19 EDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETA 98 (477)
Q Consensus 19 ~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~ 98 (477)
..+.++|++.+.||+|+||.||+|.++.+++.||+|++.... ......+.+|+.++..+ +||||+++++++.+...
T Consensus 47 ~~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~---~~~~~~~~~E~~il~~l-~hpnIv~~~~~~~~~~~ 122 (387)
T 1kob_A 47 GSVYDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPY---PLDKYTVKNEISIMNQL-HHPKLINLHDAFEDKYE 122 (387)
T ss_dssp SCGGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS---HHHHHHHHHHHHHHTTC-CSTTBCCEEEEEECSSE
T ss_pred CccccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccc---hhhHHHHHHHHHHHHhC-CCcCCCeEEEEEEeCCE
Confidence 456789999999999999999999999999999999986542 23445788999999999 79999999999999999
Q ss_pred EEEEEeccCCCchHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCcccc
Q 042823 99 VHVVMELCEGGDLFDRIIAKG-YNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLF 177 (477)
Q Consensus 99 ~~lv~e~~~gg~L~~~l~~~~-~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~ 177 (477)
+|+|||||+||+|.+++.... .+++.++..++.||+.||.|||++||+||||||+||++.. +..+.+||+|||++...
T Consensus 123 ~~lv~E~~~gg~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~-~~~~~vkL~DFG~a~~~ 201 (387)
T 1kob_A 123 MVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCET-KKASSVKIIDFGLATKL 201 (387)
T ss_dssp EEEEEECCCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESS-TTCCCEEECCCTTCEEC
T ss_pred EEEEEEcCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccchHHeEEec-CCCCceEEEecccceec
Confidence 999999999999999987654 6899999999999999999999999999999999998832 23567999999999887
Q ss_pred CCCcceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCCCCHHH
Q 042823 178 EEGQVYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTA 256 (477)
Q Consensus 178 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 256 (477)
..........||+.|+|||++.+ .++.++|||||||++|+|++|.+||.+.+.......+......++...++.+|+++
T Consensus 202 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~ 281 (387)
T 1kob_A 202 NPDEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEA 281 (387)
T ss_dssp CTTSCEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHCCCCCCSSTTTTSCHHH
T ss_pred CCCcceeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCccccccCCHHH
Confidence 66555566789999999999875 58999999999999999999999999988888888888888777777778899999
Q ss_pred HHHHHHhcccCccccCCHHHHhcCcccCcCC
Q 042823 257 KDLVRRMLTKDPKRRITAAQVLEHPWLRESG 287 (477)
Q Consensus 257 ~~li~~~l~~dp~~R~s~~~~l~h~~~~~~~ 287 (477)
++||.+||+.||.+|||+.++|+||||+...
T Consensus 282 ~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~ 312 (387)
T 1kob_A 282 KDFIKNLLQKEPRKRLTVHDALEHPWLKGDH 312 (387)
T ss_dssp HHHHHTTSCSSGGGSCCHHHHHTSTTTSSCC
T ss_pred HHHHHHHcCCChhHCcCHHHHhhCccccCCc
Confidence 9999999999999999999999999998654
|
| >3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-52 Score=400.67 Aligned_cols=248 Identities=18% Similarity=0.264 Sum_probs=191.2
Q ss_pred ccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCC---
Q 042823 21 VMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDET--- 97 (477)
Q Consensus 21 ~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~--- 97 (477)
+..+|.+.+.||+|+||+||+|++ +|+.||||++.... ......+.|+..+.++ +|||||++++++..++
T Consensus 1 Iar~i~L~~~iG~G~fG~Vy~~~~--~g~~VAvK~l~~~~----~~~~~~e~Ei~~~~~l-~HpNIv~l~g~~~~~~~~~ 73 (303)
T 3hmm_A 1 IARTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSRE----ERSWFREAEIYQTVML-RHENILGFIAADNKDNGTW 73 (303)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEE--TTEEEEEEEECGGG----HHHHHHHHHHHTSTTC-CCTTBCCEEEEEEEECSSS
T ss_pred CCcEEEEEEEEeeCCCeEEEEEEE--CCEEEEEEEECccc----hhhHHHHHHHHHHhcC-CCCCCCcEEEEEEecCCCc
Confidence 346799999999999999999987 58999999985432 1222334566666667 7999999999997653
Q ss_pred -eEEEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHc--------CCeeccCCCCceeeeecCCCCCEEE
Q 042823 98 -AVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSM--------GVMHRDLKPENFSFISRDDNALLKV 168 (477)
Q Consensus 98 -~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~--------~ivH~dlkp~Nil~~~~~~~~~~kl 168 (477)
.+|||||||+||+|.+++... .+++..+..++.|++.||.|||++ +||||||||+|||+ +.++.+||
T Consensus 74 ~~~~lV~Ey~~~gsL~~~l~~~-~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl---~~~~~~Ki 149 (303)
T 3hmm_A 74 TQLWLVSDYHEHGSLFDYLNRY-TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILV---KKNGTCCI 149 (303)
T ss_dssp EEEEEEEECCTTCBHHHHHHHC-CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEE---CTTSCEEE
T ss_pred eEEEEEecCCCCCcHHHHHHhC-CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEE---CCCCCEEE
Confidence 689999999999999999765 588999999999999999999987 99999999999999 78899999
Q ss_pred eecCCccccCCCcc-----eecccccccccchhhhhh-------hcCCccchHhHHHHHHHHhhCCCCCCCCC-------
Q 042823 169 TDFGSALLFEEGQV-----YRDIVGSGFYIAPEVLRR-------RYGKEIDIWSAGVILYILLSGVPPFWAET------- 229 (477)
Q Consensus 169 ~Dfg~a~~~~~~~~-----~~~~~gt~~y~aPE~~~~-------~~~~~~DiwslG~il~~l~tg~~pf~~~~------- 229 (477)
+|||+|+....... ....+||+.|||||++.+ .|+.++|||||||++|||+||.+||....
T Consensus 150 ~DFGla~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~ 229 (303)
T 3hmm_A 150 ADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYY 229 (303)
T ss_dssp CCCTTCEEEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTT
T ss_pred EeCCCCccccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccch
Confidence 99999987644322 124579999999999864 47789999999999999999987764321
Q ss_pred --------hhhHHHHHHcCCccCCCC-CC--CCCCHHHHHHHHHhcccCccccCCHHHHhc
Q 042823 230 --------KKGTYDAILQGEIDFDTD-PW--PSISSTAKDLVRRMLTKDPKRRITAAQVLE 279 (477)
Q Consensus 230 --------~~~~~~~i~~~~~~~~~~-~~--~~~~~~~~~li~~~l~~dp~~R~s~~~~l~ 279 (477)
.......+.......+.+ .+ ...++.+.+|+.+||+.||++|||+.++++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~ 290 (303)
T 3hmm_A 230 DLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKK 290 (303)
T ss_dssp TTSCSSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHH
T ss_pred hcccccchHHHHHHHHhcccCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHH
Confidence 112222333332211111 01 113357889999999999999999999975
|
| >1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-52 Score=405.77 Aligned_cols=257 Identities=29% Similarity=0.515 Sum_probs=231.1
Q ss_pred cccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeE
Q 042823 20 DVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAV 99 (477)
Q Consensus 20 ~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~ 99 (477)
...++|++++.||+|+||.||+|+++.+|+.||+|++.+...........+.+|+.++..+ +||||+++++++.+...+
T Consensus 38 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~ 116 (350)
T 1rdq_E 38 AQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVKLEFSFKDNSNL 116 (350)
T ss_dssp CCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTC-CCTTBCCEEEEEECSSEE
T ss_pred CCHHHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhC-CCCCCCeEEEEEEcCCEE
Confidence 4557899999999999999999999999999999999764332233456788999999998 799999999999999999
Q ss_pred EEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCC
Q 042823 100 HVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEE 179 (477)
Q Consensus 100 ~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~ 179 (477)
|+|||||+||+|.+++.+.+.+++..++.++.||+.||.|||++||+||||||+||++ +.++.+||+|||++.....
T Consensus 117 ~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll---~~~g~~kL~DFg~a~~~~~ 193 (350)
T 1rdq_E 117 YMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKG 193 (350)
T ss_dssp EEEEECCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE---CTTSCEEECCCTTCEECSS
T ss_pred EEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCccceEEE---CCCCCEEEcccccceeccC
Confidence 9999999999999999998899999999999999999999999999999999999999 7788999999999987654
Q ss_pred Ccceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCCCCHHHHH
Q 042823 180 GQVYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKD 258 (477)
Q Consensus 180 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 258 (477)
. ....+||+.|+|||++.+ .++.++|||||||++|+|++|.+||.+.+.......+..+...++ +.+|+++.+
T Consensus 194 ~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p----~~~~~~~~~ 267 (350)
T 1rdq_E 194 R--TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP----SHFSSDLKD 267 (350)
T ss_dssp C--BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCC----TTCCHHHHH
T ss_pred C--cccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCHHHHHHHHHcCCCCCC----CCCCHHHHH
Confidence 3 245689999999999865 689999999999999999999999999988888888888866554 367999999
Q ss_pred HHHHhcccCccccCC-----HHHHhcCcccCcC
Q 042823 259 LVRRMLTKDPKRRIT-----AAQVLEHPWLRES 286 (477)
Q Consensus 259 li~~~l~~dp~~R~s-----~~~~l~h~~~~~~ 286 (477)
+|.+||+.||.+||+ +.++++||||+..
T Consensus 268 li~~lL~~dp~~R~~~~~~~~~ei~~h~~f~~~ 300 (350)
T 1rdq_E 268 LLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATT 300 (350)
T ss_dssp HHHHHSCSCTTTCTTSSTTTTHHHHTSGGGTTC
T ss_pred HHHHHhhcCHHhccCCccCCHHHHHhCcCcCCC
Confidence 999999999999998 9999999999754
|
| >3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.2e-52 Score=393.36 Aligned_cols=264 Identities=35% Similarity=0.598 Sum_probs=225.8
Q ss_pred cccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCC
Q 042823 18 YEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDET 97 (477)
Q Consensus 18 ~~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~ 97 (477)
...+.++|++.+.||+|+||.||+|.++.++..+|+|++..... ......+.+|++++..+ +||||+++++++.+..
T Consensus 17 ~g~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~ 93 (285)
T 3is5_A 17 QGTIDDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRS--QVPMEQIEAEIEVLKSL-DHPNIIKIFEVFEDYH 93 (285)
T ss_dssp SSCHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGC--CSCHHHHHHHHHHHHTC-CCTTBCCEEEEEECSS
T ss_pred CCChhhheeecceeccCCCeEEEEEEEccCCceEEEEEeecccc--chhHHHHHHHHHHHHhC-CCchHHhHHHheecCC
Confidence 34678899999999999999999999999999999999876532 23456788999999999 7999999999999999
Q ss_pred eEEEEEeccCCCchHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCC
Q 042823 98 AVHVVMELCEGGDLFDRIIA----KGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGS 173 (477)
Q Consensus 98 ~~~lv~e~~~gg~L~~~l~~----~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~ 173 (477)
.+|+|||||+||+|.+++.. ...+++..+..++.|++.||.|||++||+||||||+||++...+..+.+||+|||+
T Consensus 94 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~ 173 (285)
T 3is5_A 94 NMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGL 173 (285)
T ss_dssp EEEEEECCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEESSSSTTCCEEECCCCC
T ss_pred eEEEEEEeCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEECCCCHHHEEEecCCCCCCEEEEeeec
Confidence 99999999999999998864 36799999999999999999999999999999999999996555668899999999
Q ss_pred ccccCCCcceecccccccccchhhhhhhcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCCCC
Q 042823 174 ALLFEEGQVYRDIVGSGFYIAPEVLRRRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSIS 253 (477)
Q Consensus 174 a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 253 (477)
+.............||+.|+|||++.+.++.++|||||||++|+|++|..||.+.........+......+... ...++
T Consensus 174 a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 252 (285)
T 3is5_A 174 AELFKSDEHSTNAAGTALYMAPEVFKRDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEPNYAVE-CRPLT 252 (285)
T ss_dssp CCC----------CTTGGGCCHHHHTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCC---CCCC
T ss_pred ceecCCcccCcCcccccCcCChHHhccCCCcccCeehHHHHHHHHHhCCCCCCCCCHHHHHhhhccCCcccccc-cCcCC
Confidence 98766555556678999999999999889999999999999999999999999888777776666655444332 23579
Q ss_pred HHHHHHHHHhcccCccccCCHHHHhcCcccCc
Q 042823 254 STAKDLVRRMLTKDPKRRITAAQVLEHPWLRE 285 (477)
Q Consensus 254 ~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~ 285 (477)
+.+.+||.+||+.||++|||+.++|+||||++
T Consensus 253 ~~~~~li~~~L~~dP~~Rps~~e~l~hp~f~~ 284 (285)
T 3is5_A 253 PQAVDLLKQMLTKDPERRPSAAQVLHHEWFKQ 284 (285)
T ss_dssp HHHHHHHHHHTCSCTTTSCCHHHHHTSGGGGC
T ss_pred HHHHHHHHHHccCChhhCcCHHHHhcCHHhhc
Confidence 99999999999999999999999999999975
|
| >3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-52 Score=403.97 Aligned_cols=264 Identities=35% Similarity=0.639 Sum_probs=210.5
Q ss_pred ccccccccc---ccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeC
Q 042823 20 DVMLHYFFG---RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDE 96 (477)
Q Consensus 20 ~~~~~Y~~~---~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~ 96 (477)
.+.++|.+. +.||+|+||+||+|.++.+++.||+|++.+. ......+|+.++..+.+||||+++++++.+.
T Consensus 5 ~f~~~y~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~------~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~ 78 (325)
T 3kn6_A 5 PFYQHYDLDLKDKPLGEGSFSICRKCVHKKSNQAFAVKIISKR------MEANTQKEITALKLCEGHPNIVKLHEVFHDQ 78 (325)
T ss_dssp HHHHHEEECTTSCCSEEETTEEEEEEEETTTCCEEEEEEEEGG------GHHHHHHHHHHHHHTTTCTTBCCEEEEEECS
T ss_pred cchhccccccCCCccccCCCeEEEEEEECCCCCEEEEEEEChh------hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcC
Confidence 455677775 8899999999999999999999999998643 3456778999999997799999999999999
Q ss_pred CeEEEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccc
Q 042823 97 TAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALL 176 (477)
Q Consensus 97 ~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~ 176 (477)
...|+|||||+||+|.+++...+.+++.++..++.||+.||.|||++||+||||||+||++...+....+||+|||++..
T Consensus 79 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~ 158 (325)
T 3kn6_A 79 LHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVSAVSHMHDVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARL 158 (325)
T ss_dssp SEEEEEECCCCSCBHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEC----CEEEECCCTTCEE
T ss_pred CEEEEEEEccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCHHHEEEecCCCcccEEEecccccee
Confidence 99999999999999999999999999999999999999999999999999999999999996544555899999999986
Q ss_pred cCCC-cceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCCh-------hhHHHHHHcCCccCCCC
Q 042823 177 FEEG-QVYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETK-------KGTYDAILQGEIDFDTD 247 (477)
Q Consensus 177 ~~~~-~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~-------~~~~~~i~~~~~~~~~~ 247 (477)
.... ......+||+.|+|||++.+ .++.++|||||||++|+|++|.+||.+... .+....+..+...++..
T Consensus 159 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 238 (325)
T 3kn6_A 159 KPPDNQPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEGE 238 (325)
T ss_dssp CCC----------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHHHTTTCCCCCSH
T ss_pred cCCCCCcccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHHHHcCCCCCCcc
Confidence 5433 23345678999999999875 589999999999999999999999976432 45667777777776666
Q ss_pred CCCCCCHHHHHHHHHhcccCccccCCHHHHhcCcccCcCCCC
Q 042823 248 PWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEA 289 (477)
Q Consensus 248 ~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~~~~ 289 (477)
.|+.+|+++++||.+||+.||.+|||+.++++||||+.....
T Consensus 239 ~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h~w~~~~~~~ 280 (325)
T 3kn6_A 239 AWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRYNEWLQDGSQL 280 (325)
T ss_dssp HHHTSCHHHHHHHHHHHCCCTTTCCCTTTSTTCGGGCTTCCC
T ss_pred cccCCCHHHHHHHHHHCCCChhHCCCHHHHhcChhhccCccC
Confidence 667899999999999999999999999999999999876543
|
| >2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-51 Score=397.35 Aligned_cols=266 Identities=33% Similarity=0.571 Sum_probs=221.8
Q ss_pred cccccccccc-ccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCC
Q 042823 19 EDVMLHYFFG-RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDET 97 (477)
Q Consensus 19 ~~~~~~Y~~~-~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~ 97 (477)
..+.++|++. +.||+|+||.||+|.+..+++.||+|++..... .....+.+|+.++.++.+||||+++++++.+.+
T Consensus 8 ~~~~~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~ 84 (316)
T 2ac3_A 8 GRFEDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPG---HIRSRVFREVEMLYQCQGHRNVLELIEFFEEED 84 (316)
T ss_dssp CCTTTSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSS---CCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETT
T ss_pred cccceeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcc---hhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCC
Confidence 3567889995 889999999999999999999999999976532 235678899999999768999999999999999
Q ss_pred eEEEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCcccc
Q 042823 98 AVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLF 177 (477)
Q Consensus 98 ~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~ 177 (477)
.+|+|||||+||+|.+++...+.+++..+..++.||+.||.|||++||+||||||+||++...+....+||+|||++...
T Consensus 85 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~ 164 (316)
T 2ac3_A 85 RFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGI 164 (316)
T ss_dssp EEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESCSSSSCSEEECCTTCCC--
T ss_pred EEEEEEEcCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEEccCCCcCceEEEEccCcccc
Confidence 99999999999999999999889999999999999999999999999999999999999954434445999999998765
Q ss_pred CCC--------cceecccccccccchhhhh------hhcCCccchHhHHHHHHHHhhCCCCCCCCCh-------------
Q 042823 178 EEG--------QVYRDIVGSGFYIAPEVLR------RRYGKEIDIWSAGVILYILLSGVPPFWAETK------------- 230 (477)
Q Consensus 178 ~~~--------~~~~~~~gt~~y~aPE~~~------~~~~~~~DiwslG~il~~l~tg~~pf~~~~~------------- 230 (477)
... ......+||+.|+|||++. ..++.++|||||||++|+|++|.+||.+...
T Consensus 165 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~ 244 (316)
T 2ac3_A 165 KLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPA 244 (316)
T ss_dssp -----------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHH
T ss_pred ccCCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccchh
Confidence 321 1123456999999999986 3589999999999999999999999977542
Q ss_pred --hhHHHHHHcCCccCCCCCCCCCCHHHHHHHHHhcccCccccCCHHHHhcCcccCcCC
Q 042823 231 --KGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESG 287 (477)
Q Consensus 231 --~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~~ 287 (477)
......+..+...++...++.+++.+++||.+||+.||.+|||+.++|+||||+...
T Consensus 245 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~~~~~~ 303 (316)
T 2ac3_A 245 CQNMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQGCA 303 (316)
T ss_dssp HHHHHHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSTTCC---
T ss_pred HHHHHHHHHhccCcccCchhcccCCHHHHHHHHHHhhCChhhCCCHHHHhcChhhcCCC
Confidence 234566666666655544567899999999999999999999999999999998653
|
| >4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-52 Score=416.02 Aligned_cols=265 Identities=29% Similarity=0.476 Sum_probs=228.2
Q ss_pred ccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCe
Q 042823 19 EDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETA 98 (477)
Q Consensus 19 ~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~ 98 (477)
....++|++++.||+|+||+||+|+++.+++.||+|++.+...........+.+|+.++..+ +||||++++++|.+...
T Consensus 70 ~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~-~hp~Iv~l~~~~~~~~~ 148 (437)
T 4aw2_A 70 RLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNG-DSKWITTLHYAFQDDNN 148 (437)
T ss_dssp SCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHS-CTTTBCCEEEEEECSSE
T ss_pred cCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhC-CCCCEEEEEEEEeeCCE
Confidence 34567899999999999999999999999999999999753222222233477899999888 79999999999999999
Q ss_pred EEEEEeccCCCchHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCcccc
Q 042823 99 VHVVMELCEGGDLFDRIIA-KGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLF 177 (477)
Q Consensus 99 ~~lv~e~~~gg~L~~~l~~-~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~ 177 (477)
+|+|||||+||+|.+++.+ .+.+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+|...
T Consensus 149 ~~lV~Ey~~gg~L~~~l~~~~~~l~e~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILl---~~~g~vkL~DFGla~~~ 225 (437)
T 4aw2_A 149 LYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILM---DMNGHIRLADFGSCLKL 225 (437)
T ss_dssp EEEEECCCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE---CTTSCEEECCCTTCEEC
T ss_pred EEEEEecCCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeeE---cCCCCEEEcchhhhhhc
Confidence 9999999999999999987 5789999999999999999999999999999999999999 78889999999999766
Q ss_pred CCCcc--eecccccccccchhhhh------hhcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCC-CC
Q 042823 178 EEGQV--YRDIVGSGFYIAPEVLR------RRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDT-DP 248 (477)
Q Consensus 178 ~~~~~--~~~~~gt~~y~aPE~~~------~~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~-~~ 248 (477)
..... ....+||+.|+|||++. +.|+.++|||||||++|+|++|.+||.+.+..+.+..+......+.. ..
T Consensus 226 ~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~ 305 (437)
T 4aw2_A 226 MEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFPTQ 305 (437)
T ss_dssp CTTSCEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHCCCCSS
T ss_pred ccCCCcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhHHHHhhhhccccccCCcc
Confidence 44332 23468999999999986 35899999999999999999999999999888888888764432222 22
Q ss_pred CCCCCHHHHHHHHHhcccCccc--cCCHHHHhcCcccCcCC
Q 042823 249 WPSISSTAKDLVRRMLTKDPKR--RITAAQVLEHPWLRESG 287 (477)
Q Consensus 249 ~~~~~~~~~~li~~~l~~dp~~--R~s~~~~l~h~~~~~~~ 287 (477)
++.+|+++++||++||..+|++ ||+++++++||||+...
T Consensus 306 ~~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~Hpff~~i~ 346 (437)
T 4aw2_A 306 VTDVSENAKDLIRRLICSREHRLGQNGIEDFKKHPFFSGID 346 (437)
T ss_dssp CCCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHTSGGGTTCC
T ss_pred cccCCHHHHHHHHHHhcccccccCCCCHHHHhCCCccCCCC
Confidence 3568999999999999999988 99999999999998654
|
| >2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-51 Score=399.06 Aligned_cols=265 Identities=37% Similarity=0.622 Sum_probs=235.4
Q ss_pred cccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccc---hhhHHHHHHHHHHHHhccCCCCeeEEEEEEE
Q 042823 18 YEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMR---LAENDMIRREIQIRLYLSGQPNVVEFKSTYE 94 (477)
Q Consensus 18 ~~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~---~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~ 94 (477)
...+.++|++.+.||+|+||.||+|.++.+|+.||+|++....... ......+.+|+.++..+ .||||+++++++.
T Consensus 7 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~ 85 (321)
T 2a2a_A 7 QQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQV-LHHNVITLHDVYE 85 (321)
T ss_dssp CSCHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHC-CCTTBCCEEEEEE
T ss_pred chhhhccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhC-CCCCcceEEEEEe
Confidence 3567889999999999999999999999999999999997654322 12356788999999999 6999999999999
Q ss_pred eCCeEEEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCC----CEEEee
Q 042823 95 DETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNA----LLKVTD 170 (477)
Q Consensus 95 ~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~----~~kl~D 170 (477)
+...+|+||||++|++|.+++...+.+++..+..++.|++.||.|||++||+||||||+||++ +..+ .+||+|
T Consensus 86 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~ivH~dikp~NIl~---~~~~~~~~~~kl~D 162 (321)
T 2a2a_A 86 NRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIML---LDKNIPIPHIKLID 162 (321)
T ss_dssp CSSEEEEEECCCCSCBHHHHHHTCSCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE---SCTTSSSCCEEECC
T ss_pred cCCEEEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChHHEEE---ecCCCCcCCEEEcc
Confidence 999999999999999999999988889999999999999999999999999999999999999 4444 799999
Q ss_pred cCCccccCCCcceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCC
Q 042823 171 FGSALLFEEGQVYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPW 249 (477)
Q Consensus 171 fg~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~ 249 (477)
||++.............||+.|+|||++.+ .++.++|||||||++|+|++|..||.+.........+......++...+
T Consensus 163 fg~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~ 242 (321)
T 2a2a_A 163 FGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFF 242 (321)
T ss_dssp CTTCEECCTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCCCHHHH
T ss_pred CccceecCccccccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccccChhhh
Confidence 999987766555566789999999999874 6899999999999999999999999998888888888877666554445
Q ss_pred CCCCHHHHHHHHHhcccCccccCCHHHHhcCcccCcC
Q 042823 250 PSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRES 286 (477)
Q Consensus 250 ~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~ 286 (477)
+.+|+.+.+||.+||+.||++|||+.++++||||...
T Consensus 243 ~~~~~~~~~li~~~l~~dp~~Rps~~e~l~hp~~~~~ 279 (321)
T 2a2a_A 243 SHTSELAKDFIRKLLVKETRKRLTIQEALRHPWITPV 279 (321)
T ss_dssp TTCCHHHHHHHHTTSCSSTTTSCCHHHHHHSTTTSCS
T ss_pred cccCHHHHHHHHHHcCCChhhCcCHHHHhcCccccCC
Confidence 6789999999999999999999999999999999754
|
| >2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-51 Score=405.27 Aligned_cols=260 Identities=28% Similarity=0.500 Sum_probs=221.1
Q ss_pred cccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeE
Q 042823 20 DVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAV 99 (477)
Q Consensus 20 ~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~ 99 (477)
.-.++|++++.||+|+||.||+|+++.+++.||+|++.+...........+.+|..++.+..+||||+++++++.+.+.+
T Consensus 35 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~ 114 (373)
T 2r5t_A 35 AKPSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKL 114 (373)
T ss_dssp CCGGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEE
T ss_pred CChhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEE
Confidence 44578999999999999999999999999999999998765443344455666776643434899999999999999999
Q ss_pred EEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccC-
Q 042823 100 HVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFE- 178 (477)
Q Consensus 100 ~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~- 178 (477)
|+|||||+||+|.+++.+.+.+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++....
T Consensus 115 ~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll---~~~g~ikL~DFG~a~~~~~ 191 (373)
T 2r5t_A 115 YFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILL---DSQGHIVLTDFGLCKENIE 191 (373)
T ss_dssp EEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE---CTTSCEEECCCCBCGGGBC
T ss_pred EEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEE---CCCCCEEEeeCcccccccc
Confidence 9999999999999999998899999999999999999999999999999999999999 788899999999998632
Q ss_pred CCcceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCCCCHHHH
Q 042823 179 EGQVYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAK 257 (477)
Q Consensus 179 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 257 (477)
........+||+.|+|||++.+ .|+.++|||||||++|+|++|.+||.+.+..+.+..+......++ +.+++.++
T Consensus 192 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~~~~----~~~~~~~~ 267 (373)
T 2r5t_A 192 HNSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQLK----PNITNSAR 267 (373)
T ss_dssp CCCCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHHHHHHHHHHSCCCCC----SSSCHHHH
T ss_pred CCCccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCC----CCCCHHHH
Confidence 3334456789999999999875 589999999999999999999999999888888888888765543 46899999
Q ss_pred HHHHHhcccCccccCCH----HHHhcCcccCcC
Q 042823 258 DLVRRMLTKDPKRRITA----AQVLEHPWLRES 286 (477)
Q Consensus 258 ~li~~~l~~dp~~R~s~----~~~l~h~~~~~~ 286 (477)
+||.+||+.||.+||++ .++++||||+..
T Consensus 268 ~li~~lL~~dp~~R~~~~~~~~~i~~h~~f~~~ 300 (373)
T 2r5t_A 268 HLLEGLLQKDRTKRLGAKDDFMEIKSHVFFSLI 300 (373)
T ss_dssp HHHHHHTCSSGGGSTTTTTTHHHHHTSGGGTTC
T ss_pred HHHHHHcccCHHhCCCCCCCHHHHhCCccccCC
Confidence 99999999999999986 699999999764
|
| >3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-51 Score=398.99 Aligned_cols=275 Identities=29% Similarity=0.527 Sum_probs=238.8
Q ss_pred Ccccccccccccccccc-ccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEE
Q 042823 12 PILGKAYEDVMLHYFFG-RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFK 90 (477)
Q Consensus 12 ~~~~~~~~~~~~~Y~~~-~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~ 90 (477)
-+..+..+.+.++|.+. +.||+|+||.||+|.++.+++.||+|++..... .......+.+|+.++..+.+||||++++
T Consensus 17 n~~~~~~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~~iv~~~ 95 (327)
T 3lm5_A 17 NLYFQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRR-GQDCRAEILHEIAVLELAKSCPRVINLH 95 (327)
T ss_dssp CCCSBCHHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEET-TEECHHHHHHHHHHHHHTTTCTTBCCEE
T ss_pred hhHHHHHHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhc-chHHHHHHHHHHHHHHhccCCCCEEEEE
Confidence 34557788999999998 899999999999999999999999999875432 2234567889999999998889999999
Q ss_pred EEEEeCCeEEEEEeccCCCchHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEE
Q 042823 91 STYEDETAVHVVMELCEGGDLFDRIIAK--GYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKV 168 (477)
Q Consensus 91 ~~~~~~~~~~lv~e~~~gg~L~~~l~~~--~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl 168 (477)
+++.+...+|+|||||+||+|.+++... +.+++.+++.++.||+.||.|||++||+||||||+||++......+.+||
T Consensus 96 ~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~~givH~Dikp~NIl~~~~~~~~~~kL 175 (327)
T 3lm5_A 96 EVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKI 175 (327)
T ss_dssp EEEECSSEEEEEEECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESCBTTBCCEEE
T ss_pred EEEEeCCeEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCcCChHHEEEecCCCCCcEEE
Confidence 9999999999999999999999988653 67899999999999999999999999999999999999944334788999
Q ss_pred eecCCccccCCCcceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCC
Q 042823 169 TDFGSALLFEEGQVYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTD 247 (477)
Q Consensus 169 ~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~ 247 (477)
+|||++.............||+.|+|||++.+ .++.++|||||||++|+|++|..||.+.........+......++..
T Consensus 176 ~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~ 255 (327)
T 3lm5_A 176 VDFGMSRKIGHACELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNVDYSEE 255 (327)
T ss_dssp CCGGGCEEC---------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTT
T ss_pred eeCccccccCCccccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHhcccccCch
Confidence 99999988766555566789999999999874 68999999999999999999999999988888888888887777777
Q ss_pred CCCCCCHHHHHHHHHhcccCccccCCHHHHhcCcccCcCC
Q 042823 248 PWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESG 287 (477)
Q Consensus 248 ~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~~ 287 (477)
.++.+++.+.+||.+||+.||.+|||+.++|+||||+...
T Consensus 256 ~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~h~~~~~~~ 295 (327)
T 3lm5_A 256 TFSSVSQLATDFIQSLLVKNPEKRPTAEICLSHSWLQQWD 295 (327)
T ss_dssp TTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTCGGGCCCC
T ss_pred hhcccCHHHHHHHHHHcCCChhhCcCHHHHhCCHhhcccc
Confidence 7788999999999999999999999999999999998754
|
| >2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-51 Score=404.64 Aligned_cols=263 Identities=35% Similarity=0.672 Sum_probs=235.0
Q ss_pred ccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCcc-c----hhhHHHHHHHHHHHHhccCCCCeeEEEEEE
Q 042823 19 EDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKM-R----LAENDMIRREIQIRLYLSGQPNVVEFKSTY 93 (477)
Q Consensus 19 ~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~-~----~~~~~~~~~e~~~~~~l~~hpniv~~~~~~ 93 (477)
..+.++|.+.++||+|+||.||+|.++.+|+.||||++...... . ......+.+|+.++..+.+||||+++++++
T Consensus 90 ~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~ 169 (365)
T 2y7j_A 90 KEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSY 169 (365)
T ss_dssp HHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEE
T ss_pred hhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEE
Confidence 35667899999999999999999999999999999998754321 1 122456788999999987799999999999
Q ss_pred EeCCeEEEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCC
Q 042823 94 EDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGS 173 (477)
Q Consensus 94 ~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~ 173 (477)
......|+||||++|++|.+++.....+++..+..++.||+.||.|||+.||+||||||+||++ +.++.+||+|||+
T Consensus 170 ~~~~~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~L~~LH~~gi~H~Dlkp~NIl~---~~~~~ikl~DfG~ 246 (365)
T 2y7j_A 170 ESSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILL---DDNMQIRLSDFGF 246 (365)
T ss_dssp EBSSEEEEEECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE---CTTCCEEECCCTT
T ss_pred eeCCEEEEEEEeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE---CCCCCEEEEecCc
Confidence 9999999999999999999999988889999999999999999999999999999999999999 7788999999999
Q ss_pred ccccCCCcceecccccccccchhhhhh-------hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCC
Q 042823 174 ALLFEEGQVYRDIVGSGFYIAPEVLRR-------RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDT 246 (477)
Q Consensus 174 a~~~~~~~~~~~~~gt~~y~aPE~~~~-------~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~ 246 (477)
+.............||+.|+|||++.+ .++.++|||||||++|+|++|..||...........+..+...+..
T Consensus 247 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~ 326 (365)
T 2y7j_A 247 SCHLEPGEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIMEGQYQFSS 326 (365)
T ss_dssp CEECCTTCCBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCH
T ss_pred ccccCCCcccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCC
Confidence 988766655566789999999999863 4788999999999999999999999988888888888887776666
Q ss_pred CCCCCCCHHHHHHHHHhcccCccccCCHHHHhcCcccC
Q 042823 247 DPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLR 284 (477)
Q Consensus 247 ~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~ 284 (477)
+.|+.+++.+.+||.+||+.||++|||+.++|+||||+
T Consensus 327 ~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~f~ 364 (365)
T 2y7j_A 327 PEWDDRSSTVKDLISRLLQVDPEARLTAEQALQHPFFE 364 (365)
T ss_dssp HHHSSSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGC
T ss_pred cccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCcccC
Confidence 66678899999999999999999999999999999996
|
| >1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-51 Score=409.30 Aligned_cols=262 Identities=34% Similarity=0.629 Sum_probs=219.0
Q ss_pred cccccccccc-ccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEe--
Q 042823 19 EDVMLHYFFG-RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYED-- 95 (477)
Q Consensus 19 ~~~~~~Y~~~-~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~-- 95 (477)
..+.++|.+. +.||+|+||+||+|.++.+++.||+|++... ....+|+.++.++.+||||++++++|..
T Consensus 57 ~~~~~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~--------~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~ 128 (400)
T 1nxk_A 57 NAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC--------PKARREVELHWRASQCPHIVRIVDVYENLY 128 (400)
T ss_dssp SCGGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS--------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEE
T ss_pred CcccccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcc--------hhHHHHHHHHHHhcCCCCcceEeEEEeecc
Confidence 3456677776 7999999999999999999999999998532 3456788888777789999999999976
Q ss_pred --CCeEEEEEeccCCCchHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeec
Q 042823 96 --ETAVHVVMELCEGGDLFDRIIAKG--YNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDF 171 (477)
Q Consensus 96 --~~~~~lv~e~~~gg~L~~~l~~~~--~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Df 171 (477)
...+|+|||||+||+|.+++...+ .+++.+++.++.||+.||.|||++||+||||||+|||+...+.++.+||+||
T Consensus 129 ~~~~~~~lv~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~~~~kl~DF 208 (400)
T 1nxk_A 129 AGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDF 208 (400)
T ss_dssp TTEEEEEEEEECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSTTCCEEECCC
T ss_pred cCCcEEEEEEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCcCcceEEEecCCCCccEEEEec
Confidence 677999999999999999998754 5899999999999999999999999999999999999954334789999999
Q ss_pred CCccccCCCcceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChh----hHHHHHHcCCccCCC
Q 042823 172 GSALLFEEGQVYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKK----GTYDAILQGEIDFDT 246 (477)
Q Consensus 172 g~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~----~~~~~i~~~~~~~~~ 246 (477)
|++............+||+.|+|||++.+ .|+.++|||||||++|+|++|.+||.+.... .....+..+...++.
T Consensus 209 G~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i~~~~~~~~~ 288 (400)
T 1nxk_A 209 GFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPN 288 (400)
T ss_dssp TTCEECC-----------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHHHHTCCCCCT
T ss_pred ccccccCCCCccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHHHcCcccCCC
Confidence 99987665555566789999999999864 6899999999999999999999999776533 355677777777777
Q ss_pred CCCCCCCHHHHHHHHHhcccCccccCCHHHHhcCcccCcCCC
Q 042823 247 DPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGE 288 (477)
Q Consensus 247 ~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~~~ 288 (477)
..|+.+|+++++||.+||+.||++|||+.++++||||.....
T Consensus 289 ~~~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~hp~~~~~~~ 330 (400)
T 1nxk_A 289 PEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTK 330 (400)
T ss_dssp TTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHTTTT
T ss_pred cccccCCHHHHHHHHHHCCCChhHCcCHHHHhcCccccCCCC
Confidence 778889999999999999999999999999999999986543
|
| >2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-51 Score=409.63 Aligned_cols=264 Identities=27% Similarity=0.442 Sum_probs=225.9
Q ss_pred ccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCe
Q 042823 19 EDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETA 98 (477)
Q Consensus 19 ~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~ 98 (477)
....++|++.+.||+|+||.||+|+++.+++.||+|++.+...........+.+|..++..+ +||||+++++++++.+.
T Consensus 57 ~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~-~hp~Iv~l~~~~~~~~~ 135 (412)
T 2vd5_A 57 RLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNG-DRRWITQLHFAFQDENY 135 (412)
T ss_dssp SCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHS-CTTTBCCEEEEEECSSE
T ss_pred cCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhc-CCCCeeeEEEEEeeCCE
Confidence 34567899999999999999999999999999999999754322222334577899999888 79999999999999999
Q ss_pred EEEEEeccCCCchHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCcccc
Q 042823 99 VHVVMELCEGGDLFDRIIAKG-YNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLF 177 (477)
Q Consensus 99 ~~lv~e~~~gg~L~~~l~~~~-~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~ 177 (477)
+|+|||||+||+|.+++.+.+ .+++..++.++.||+.||.|||++||+||||||+|||+ +..+.+||+|||++...
T Consensus 136 ~~lVmE~~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILl---d~~g~vkL~DFGla~~~ 212 (412)
T 2vd5_A 136 LYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNILL---DRCGHIRLADFGSCLKL 212 (412)
T ss_dssp EEEEECCCCSCBHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE---CTTSCEEECCCTTCEEC
T ss_pred EEEEEcCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccCHHHeee---cCCCCEEEeechhheec
Confidence 999999999999999998754 79999999999999999999999999999999999999 78899999999999876
Q ss_pred CCCcc--eecccccccccchhhhh--------hhcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCC
Q 042823 178 EEGQV--YRDIVGSGFYIAPEVLR--------RRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTD 247 (477)
Q Consensus 178 ~~~~~--~~~~~gt~~y~aPE~~~--------~~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~ 247 (477)
..... ....+||+.|+|||++. +.|+.++|||||||++|+|++|.+||.+.+..+.+..+.........+
T Consensus 213 ~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~~~p 292 (412)
T 2vd5_A 213 RADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVHYKEHLSLP 292 (412)
T ss_dssp CTTSCEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHCCCC
T ss_pred cCCCccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHHHHHHHHHhcccCcCCC
Confidence 54432 23468999999999986 358999999999999999999999999988888888887643222211
Q ss_pred -CCCCCCHHHHHHHHHhcccCcccc---CCHHHHhcCcccCcCC
Q 042823 248 -PWPSISSTAKDLVRRMLTKDPKRR---ITAAQVLEHPWLRESG 287 (477)
Q Consensus 248 -~~~~~~~~~~~li~~~l~~dp~~R---~s~~~~l~h~~~~~~~ 287 (477)
....+|+++++||++||. +|.+| |+++++++||||+...
T Consensus 293 ~~~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~Hpff~~i~ 335 (412)
T 2vd5_A 293 LVDEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRTHPFFFGLD 335 (412)
T ss_dssp ----CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHTSGGGTTCC
T ss_pred ccccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhcCCCcCCCC
Confidence 124689999999999999 99998 5999999999998654
|
| >2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.8e-52 Score=418.14 Aligned_cols=263 Identities=33% Similarity=0.573 Sum_probs=234.3
Q ss_pred cccccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEe
Q 042823 16 KAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYED 95 (477)
Q Consensus 16 ~~~~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~ 95 (477)
+......++|.+++.||+|+||.||+|.+..+|+.||+|++.+...........+.+|+.++..+ +||||+++++++.+
T Consensus 9 ~~~~~~~~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l-~HpnIv~l~~~~~~ 87 (476)
T 2y94_A 9 HDGRVKIGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLF-RHPHIIKLYQVIST 87 (476)
T ss_dssp CCSCCEETTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTC-CCTTBCCEEEEEEC
T ss_pred cCCCceecCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhC-CCCCCCcEEEEEEE
Confidence 44556678999999999999999999999999999999999754322223456788999999988 79999999999999
Q ss_pred CCeEEEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCcc
Q 042823 96 ETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSAL 175 (477)
Q Consensus 96 ~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~ 175 (477)
...+|+|||||+||+|.+++...+.+++..++.++.||+.||.|||++||+||||||+||++ +.++.+||+|||++.
T Consensus 88 ~~~~~lv~E~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDLkp~NIll---~~~~~vkL~DFG~a~ 164 (476)
T 2y94_A 88 PSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLL---DAHMNAKIADFGLSN 164 (476)
T ss_dssp SSEEEEEEECCSSEEHHHHTTSSSSCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEE---CTTCCEEECCCSSCE
T ss_pred CCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCCcccccHHHEEE---ecCCCeEEEeccchh
Confidence 99999999999999999999988899999999999999999999999999999999999999 778899999999998
Q ss_pred ccCCCcceecccccccccchhhhhhh-c-CCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCCCC
Q 042823 176 LFEEGQVYRDIVGSGFYIAPEVLRRR-Y-GKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSIS 253 (477)
Q Consensus 176 ~~~~~~~~~~~~gt~~y~aPE~~~~~-~-~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 253 (477)
...........+||+.|+|||++.+. + +.++|||||||++|+|++|.+||.+.........+..+....+ ..++
T Consensus 165 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~p----~~~s 240 (476)
T 2y94_A 165 MMSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDGIFYTP----QYLN 240 (476)
T ss_dssp ECCTTCCBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSHHHHHHHHTTCCCCC----TTCC
T ss_pred hccccccccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHHHHHHHHhcCCcCCC----ccCC
Confidence 87666556677899999999999764 3 6899999999999999999999998888888888887765433 3578
Q ss_pred HHHHHHHHHhcccCccccCCHHHHhcCcccCcC
Q 042823 254 STAKDLVRRMLTKDPKRRITAAQVLEHPWLRES 286 (477)
Q Consensus 254 ~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~ 286 (477)
+++.+||.+||+.||.+|||+.++++||||+..
T Consensus 241 ~~~~~Li~~~L~~dP~~Rpt~~eil~hp~~~~~ 273 (476)
T 2y94_A 241 PSVISLLKHMLQVDPMKRATIKDIREHEWFKQD 273 (476)
T ss_dssp HHHHHHHHHHTCSSTTTSCCHHHHHTCHHHHTT
T ss_pred HHHHHHHHHHcCCCchhCcCHHHHHhCHHhhhc
Confidence 999999999999999999999999999999764
|
| >3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-51 Score=388.40 Aligned_cols=258 Identities=26% Similarity=0.431 Sum_probs=215.4
Q ss_pred ccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 042823 23 LHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVV 102 (477)
Q Consensus 23 ~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~lv 102 (477)
++|++++.||+|+||+||+|.++.+++.||+|++..... .......+.+|+.++.++ +||||+++++++.+++.+|+|
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv 79 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDD-DEGVPSSALREICLLKEL-KHKNIVRLHDVLHSDKKLTLV 79 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCS-STTHHHHHHHHHHHHTTC-CCTTBCCEEEEEEETTEEEEE
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCC-cCCcchHHHHHHHHHhcC-CCCCEeeEEeEEEeCCEEEEE
Confidence 689999999999999999999999999999999976543 233456778999999999 799999999999999999999
Q ss_pred EeccCCCchHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCCC-
Q 042823 103 MELCEGGDLFDRIIA-KGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEG- 180 (477)
Q Consensus 103 ~e~~~gg~L~~~l~~-~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~- 180 (477)
||||+| +|.+.+.. .+.+++..++.++.|++.||.|||++||+||||||+||++ +.++.+||+|||++......
T Consensus 80 ~e~~~~-~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~ivH~dikp~Nil~---~~~~~~kl~Dfg~~~~~~~~~ 155 (292)
T 3o0g_A 80 FEFCDQ-DLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLI---NRNGELKLANFGLARAFGIPV 155 (292)
T ss_dssp EECCSE-EHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE---CTTSCEEECCCTTCEECCSCC
T ss_pred EecCCC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE---cCCCCEEEeecccceecCCcc
Confidence 999986 56566554 6789999999999999999999999999999999999999 77889999999999876433
Q ss_pred cceecccccccccchhhhhh-h-cCCccchHhHHHHHHHHhhCCCC-CCCCChhhHHHHHHcCCccCCC-----------
Q 042823 181 QVYRDIVGSGFYIAPEVLRR-R-YGKEIDIWSAGVILYILLSGVPP-FWAETKKGTYDAILQGEIDFDT----------- 246 (477)
Q Consensus 181 ~~~~~~~gt~~y~aPE~~~~-~-~~~~~DiwslG~il~~l~tg~~p-f~~~~~~~~~~~i~~~~~~~~~----------- 246 (477)
.......||+.|+|||++.+ . ++.++||||+||++|+|++|..| |.+.........+.+.......
T Consensus 156 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 235 (292)
T 3o0g_A 156 RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPD 235 (292)
T ss_dssp SCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTT
T ss_pred ccccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhhhhhccccc
Confidence 23345688999999999865 3 79999999999999999988777 4555555555555432111111
Q ss_pred --------------CCCCCCCHHHHHHHHHhcccCccccCCHHHHhcCcccCcC
Q 042823 247 --------------DPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRES 286 (477)
Q Consensus 247 --------------~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~ 286 (477)
...+.+++.+++||.+||+.||++|||+.++|+||||+..
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~ 289 (292)
T 3o0g_A 236 YKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSDF 289 (292)
T ss_dssp CCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTC
T ss_pred ccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhcCcccccC
Confidence 1123578999999999999999999999999999999864
|
| >3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-51 Score=393.85 Aligned_cols=267 Identities=27% Similarity=0.432 Sum_probs=220.2
Q ss_pred cccccccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEE
Q 042823 14 LGKAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTY 93 (477)
Q Consensus 14 ~~~~~~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~ 93 (477)
.....+.+.++|++++.||+|+||+||+|.+. +++.||+|++..... .......+.+|+.++..+ +||||+++++++
T Consensus 12 ~~~~~q~l~~~y~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~ 88 (311)
T 3niz_A 12 ENLYFQGLMEKYQKLEKVGEGTYGVVYKAKDS-QGRIVALKRIRLDAE-DEGIPSTAIREISLLKEL-HHPNIVSLIDVI 88 (311)
T ss_dssp ---CEECSSCEEEEEEEEEECSSCEEEEEEET-TSCEEEEEEEC-------CHHHHHHHHHHHHHHC-CCTTBCCEEEEE
T ss_pred cceeecchHhhhHhhhhccCCCCeEEEEEEEC-CCCEEEEEEEecccc-cchhhHHHHHHHHHHHHc-CCCCEeeeeeEE
Confidence 34567889999999999999999999999985 589999999865432 223346778999999999 799999999999
Q ss_pred EeCCeEEEEEeccCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecC
Q 042823 94 EDETAVHVVMELCEGGDLFDRIIAK-GYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFG 172 (477)
Q Consensus 94 ~~~~~~~lv~e~~~gg~L~~~l~~~-~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg 172 (477)
.++..+|+|||||+| +|.+.+... ..+++..++.++.|++.||.|||++||+||||||+||++ +.++.+||+|||
T Consensus 89 ~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIl~---~~~~~~kl~Dfg 164 (311)
T 3niz_A 89 HSERCLTLVFEFMEK-DLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLI---NSDGALKLADFG 164 (311)
T ss_dssp CCSSCEEEEEECCSE-EHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE---CTTCCEEECCCT
T ss_pred ccCCEEEEEEcCCCC-CHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCchHhEEE---CCCCCEEEccCc
Confidence 999999999999986 888888765 458999999999999999999999999999999999999 778899999999
Q ss_pred CccccCCC-cceecccccccccchhhhhh--hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCC--
Q 042823 173 SALLFEEG-QVYRDIVGSGFYIAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTD-- 247 (477)
Q Consensus 173 ~a~~~~~~-~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~-- 247 (477)
++...... .......||+.|+|||++.+ .++.++|||||||++|+|++|.+||.+.........+..........
T Consensus 165 ~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~ 244 (311)
T 3niz_A 165 LARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREW 244 (311)
T ss_dssp TCEETTSCCC---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHHHHHHHHHCCCCTTTS
T ss_pred CceecCCCcccccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHCCCChHHh
Confidence 99876432 23345678999999999864 58999999999999999999999998887777666654421111111
Q ss_pred ------------------------CCCCCCHHHHHHHHHhcccCccccCCHHHHhcCcccCcCC
Q 042823 248 ------------------------PWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESG 287 (477)
Q Consensus 248 ------------------------~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~~ 287 (477)
..+.+++++.+||.+||+.||++|||+.++|+||||+...
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~ 308 (311)
T 3niz_A 245 PQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYFKDLD 308 (311)
T ss_dssp GGGTTSHHHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGGTTSC
T ss_pred hhhhccchhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhcCcccccCC
Confidence 1235788999999999999999999999999999998653
|
| >1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.4e-51 Score=388.50 Aligned_cols=269 Identities=35% Similarity=0.645 Sum_probs=237.2
Q ss_pred cccccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccc------hhhHHHHHHHHHHHHhccCCCCeeEE
Q 042823 16 KAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMR------LAENDMIRREIQIRLYLSGQPNVVEF 89 (477)
Q Consensus 16 ~~~~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~------~~~~~~~~~e~~~~~~l~~hpniv~~ 89 (477)
.....+.++|++.+.||+|+||.||+|.++.+++.||+|++....... ......+.+|+.++.++.+||||+++
T Consensus 10 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~ 89 (298)
T 1phk_A 10 HSTHGFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQL 89 (298)
T ss_dssp -----CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCE
T ss_pred cCCcchhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeee
Confidence 345678899999999999999999999999999999999997543211 12345678899999999779999999
Q ss_pred EEEEEeCCeEEEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEe
Q 042823 90 KSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVT 169 (477)
Q Consensus 90 ~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~ 169 (477)
++++......|+||||++|++|.+++.....+++..+..++.||+.||.|||++|++||||||+||++ +.++.+||+
T Consensus 90 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~---~~~~~~kl~ 166 (298)
T 1phk_A 90 KDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILL---DDDMNIKLT 166 (298)
T ss_dssp EEEEECSSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE---CTTCCEEEC
T ss_pred eeeeccCCeEEEEEeccCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEE---cCCCcEEEe
Confidence 99999999999999999999999999988889999999999999999999999999999999999999 778899999
Q ss_pred ecCCccccCCCcceecccccccccchhhhhh-------hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCc
Q 042823 170 DFGSALLFEEGQVYRDIVGSGFYIAPEVLRR-------RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEI 242 (477)
Q Consensus 170 Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~-------~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~ 242 (477)
|||++.............||+.|+|||++.+ .++.++||||||+++|+|++|..||...........+..+..
T Consensus 167 dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~ 246 (298)
T 1phk_A 167 DFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNY 246 (298)
T ss_dssp CCTTCEECCTTCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCC
T ss_pred cccchhhcCCCcccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHHHHHHHHhcCCc
Confidence 9999987766555566789999999999852 478899999999999999999999999888888888888877
Q ss_pred cCCCCCCCCCCHHHHHHHHHhcccCccccCCHHHHhcCcccCcCC
Q 042823 243 DFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESG 287 (477)
Q Consensus 243 ~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~~ 287 (477)
.++.+.++.+|+.+.++|.+||+.||.+|||+.++++||||++..
T Consensus 247 ~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~~~~~~~ 291 (298)
T 1phk_A 247 QFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQYV 291 (298)
T ss_dssp CCCTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTSGGGCTTC
T ss_pred ccCcccccccCHHHHHHHHHHccCCcccCCCHHHHHhChHhhhcc
Confidence 777766778999999999999999999999999999999998654
|
| >3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-51 Score=391.88 Aligned_cols=265 Identities=24% Similarity=0.346 Sum_probs=216.6
Q ss_pred ccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCcc--chhhHHHHHHHHHHHHhcc--CCCCeeEEEEEEE
Q 042823 19 EDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKM--RLAENDMIRREIQIRLYLS--GQPNVVEFKSTYE 94 (477)
Q Consensus 19 ~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~--~~~~~~~~~~e~~~~~~l~--~hpniv~~~~~~~ 94 (477)
..+.++|++++.||+|+||+||+|++..+++.||+|++...... .........+|+.++..+. +||||+++++++.
T Consensus 5 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~ 84 (308)
T 3g33_A 5 SMATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCA 84 (308)
T ss_dssp -----CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEE
T ss_pred cccccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeee
Confidence 45678999999999999999999999999999999998643311 1111234567777777664 5999999999998
Q ss_pred eCC-----eEEEEEeccCCCchHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEE
Q 042823 95 DET-----AVHVVMELCEGGDLFDRIIAKGY--NSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLK 167 (477)
Q Consensus 95 ~~~-----~~~lv~e~~~gg~L~~~l~~~~~--~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~k 167 (477)
... .+++||||+.| +|.+++..... +++..++.++.||+.||.|||++||+||||||+||++ +.++.+|
T Consensus 85 ~~~~~~~~~~~lv~e~~~~-~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~---~~~~~~k 160 (308)
T 3g33_A 85 TSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILV---TSGGTVK 160 (308)
T ss_dssp ECCSSSEEEEEEEEECCCC-BHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCTTTEEE---CTTSCEE
T ss_pred ccCCCCceeEEEEehhhhc-CHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEE---cCCCCEE
Confidence 765 58999999974 99999987654 8999999999999999999999999999999999999 7788999
Q ss_pred EeecCCccccCCCcceecccccccccchhhhh-hhcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCC
Q 042823 168 VTDFGSALLFEEGQVYRDIVGSGFYIAPEVLR-RRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDT 246 (477)
Q Consensus 168 l~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~ 246 (477)
|+|||++.............||+.|+|||++. ..++.++|||||||++|+|++|.+||.+.+.......+.......+.
T Consensus 161 l~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~ 240 (308)
T 3g33_A 161 LADFGLARIYSYQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPE 240 (308)
T ss_dssp ECSCSCTTTSTTCCCSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHHHHHHHHHHCCCCT
T ss_pred EeeCccccccCCCcccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCh
Confidence 99999998776655556678999999999986 46899999999999999999999999998887777766543221111
Q ss_pred CC-----------------------CCCCCHHHHHHHHHhcccCccccCCHHHHhcCcccCcCC
Q 042823 247 DP-----------------------WPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESG 287 (477)
Q Consensus 247 ~~-----------------------~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~~ 287 (477)
.. .+.+++.+.+||.+||+.||++|||+.++|+||||+...
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h~~~~~~~ 304 (308)
T 3g33_A 241 DDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLHKDE 304 (308)
T ss_dssp TTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTSTTC----
T ss_pred hhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhcCccccCCC
Confidence 11 235789999999999999999999999999999998654
|
| >2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-51 Score=401.33 Aligned_cols=262 Identities=32% Similarity=0.583 Sum_probs=227.6
Q ss_pred cccccccc--cccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCC
Q 042823 20 DVMLHYFF--GRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDET 97 (477)
Q Consensus 20 ~~~~~Y~~--~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~ 97 (477)
.+...|.+ .+.||+|+||.||+|.+..+|+.||+|++.... ......+.+|+.++..+ +||||+++++++.+.+
T Consensus 84 ~~~~~~~~~~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~hpnIv~~~~~~~~~~ 159 (373)
T 2x4f_A 84 AVNSFYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRG---MKDKEEVKNEISVMNQL-DHANLIQLYDAFESKN 159 (373)
T ss_dssp CGGGTEEEEEEEECC-----CEEEEEETTTCCEEEEEEEECCS---HHHHHHHHHHHHHHTTC-CCTTBCCEEEEEECSS
T ss_pred ccccceeeecceEEecCcCEEEEEEEEcCCCcEEEEEEEcccc---cccHHHHHHHHHHHHhC-CCCCCCeEEEEEEECC
Confidence 45556666 578999999999999999999999999987543 23456788999999999 7999999999999999
Q ss_pred eEEEEEeccCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccc
Q 042823 98 AVHVVMELCEGGDLFDRIIAK-GYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALL 176 (477)
Q Consensus 98 ~~~lv~e~~~gg~L~~~l~~~-~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~ 176 (477)
.+|+|||||+||+|.+++... ..+++..+..++.||+.||.|||++||+||||||+||++.. +..+.+||+|||++..
T Consensus 160 ~~~lv~E~~~~~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~-~~~~~~kl~DFG~a~~ 238 (373)
T 2x4f_A 160 DIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMYILHLDLKPENILCVN-RDAKQIKIIDFGLARR 238 (373)
T ss_dssp EEEEEEECCTTCEEHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEE-TTTTEEEECCCSSCEE
T ss_pred EEEEEEeCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEec-CCCCcEEEEeCCCcee
Confidence 999999999999999988764 46899999999999999999999999999999999998843 3457899999999988
Q ss_pred cCCCcceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCCCCHH
Q 042823 177 FEEGQVYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISST 255 (477)
Q Consensus 177 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 255 (477)
...........||+.|+|||++.+ .++.++|||||||++|+|++|..||.+.+....+..+......++...++.++++
T Consensus 239 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 318 (373)
T 2x4f_A 239 YKPREKLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDLEDEEFQDISEE 318 (373)
T ss_dssp CCTTCBCCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCSCSGGGTTSCHH
T ss_pred cCCccccccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCChhhhccCCHH
Confidence 766655566689999999999875 5888999999999999999999999999888888888888777776667789999
Q ss_pred HHHHHHHhcccCccccCCHHHHhcCcccCcC
Q 042823 256 AKDLVRRMLTKDPKRRITAAQVLEHPWLRES 286 (477)
Q Consensus 256 ~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~ 286 (477)
+++||.+||+.||.+|||+.++|+||||+..
T Consensus 319 ~~~li~~~L~~dp~~Rps~~e~l~hp~~~~~ 349 (373)
T 2x4f_A 319 AKEFISKLLIKEKSWRISASEALKHPWLSDH 349 (373)
T ss_dssp HHHHHHTTSCSSGGGSCCHHHHHHSHHHHCH
T ss_pred HHHHHHHHcCCChhhCCCHHHHhcCcCcCCC
Confidence 9999999999999999999999999999753
|
| >3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.1e-51 Score=403.69 Aligned_cols=262 Identities=29% Similarity=0.476 Sum_probs=211.9
Q ss_pred cccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCC
Q 042823 18 YEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDET 97 (477)
Q Consensus 18 ~~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~ 97 (477)
...+.++|++++.||+|+||+||+|.++.+|+.||+|++.+. .........+.+|+.++..+.+||||+++++++...+
T Consensus 4 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~-~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~ 82 (388)
T 3oz6_A 4 DRHVLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDA-FQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADN 82 (388)
T ss_dssp CHHHHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC---CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTT
T ss_pred cCcccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEeccc-ccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCC
Confidence 356778999999999999999999999999999999998643 2334456678899999999977999999999997544
Q ss_pred --eEEEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCcc
Q 042823 98 --AVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSAL 175 (477)
Q Consensus 98 --~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~ 175 (477)
.+|+|||||+| +|.+++.. +.+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+|.
T Consensus 83 ~~~~~lv~e~~~~-~L~~~~~~-~~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll---~~~~~~kl~DFG~a~ 157 (388)
T 3oz6_A 83 DRDVYLVFDYMET-DLHAVIRA-NILEPVHKQYVVYQLIKVIKYLHSGGLLHRDMKPSNILL---NAECHVKVADFGLSR 157 (388)
T ss_dssp SSCEEEEEECCSE-EHHHHHHH-TCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE---CTTCCEEECCCTTCE
T ss_pred CCEEEEEecccCc-CHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHeEE---cCCCCEEecCCcccc
Confidence 79999999974 89888876 578999999999999999999999999999999999999 788899999999997
Q ss_pred ccCC----------------------Ccceecccccccccchhhhhh--hcCCccchHhHHHHHHHHhhCCCCCCCCChh
Q 042823 176 LFEE----------------------GQVYRDIVGSGFYIAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPFWAETKK 231 (477)
Q Consensus 176 ~~~~----------------------~~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~l~tg~~pf~~~~~~ 231 (477)
.... .......+||++|+|||++.+ .|+.++|||||||++|+|++|.+||.+.+..
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~ 237 (388)
T 3oz6_A 158 SFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTM 237 (388)
T ss_dssp ESSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH
T ss_pred cccccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCHH
Confidence 6532 112344689999999999865 5899999999999999999999999998877
Q ss_pred hHHHHHHcCCccCCC--------------------------------------------CCCCCCCHHHHHHHHHhcccC
Q 042823 232 GTYDAILQGEIDFDT--------------------------------------------DPWPSISSTAKDLVRRMLTKD 267 (477)
Q Consensus 232 ~~~~~i~~~~~~~~~--------------------------------------------~~~~~~~~~~~~li~~~l~~d 267 (477)
..+..+.... ..+. .++..+++++.+||.+||+.|
T Consensus 238 ~~~~~i~~~~-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~~d 316 (388)
T 3oz6_A 238 NQLERIIGVI-DFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFN 316 (388)
T ss_dssp HHHHHHHHHH-CCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCCSS
T ss_pred HHHHHHHHhc-CCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhccC
Confidence 7766664311 0000 012367899999999999999
Q ss_pred ccccCCHHHHhcCcccCcC
Q 042823 268 PKRRITAAQVLEHPWLRES 286 (477)
Q Consensus 268 p~~R~s~~~~l~h~~~~~~ 286 (477)
|++|||+.++|+||||+..
T Consensus 317 P~~R~t~~e~l~Hp~~~~~ 335 (388)
T 3oz6_A 317 PNKRISANDALKHPFVSIF 335 (388)
T ss_dssp GGGSCCHHHHTTSTTTTTT
T ss_pred cccCCCHHHHhCCHHHHHh
Confidence 9999999999999999754
|
| >2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A | Back alignment and structure |
|---|
Probab=100.00 E-value=9.1e-51 Score=389.47 Aligned_cols=265 Identities=36% Similarity=0.708 Sum_probs=234.6
Q ss_pred ccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCe
Q 042823 19 EDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETA 98 (477)
Q Consensus 19 ~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~ 98 (477)
..+.++|.+.+.||+|+||.||+|.++.+|+.||+|++..... .....+.+|+.++..+ +||||+++++++.+...
T Consensus 5 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~ 80 (304)
T 2jam_A 5 TNIRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPA---FRDSSLENEIAVLKKI-KHENIVTLEDIYESTTH 80 (304)
T ss_dssp -CHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC---------HHHHHHHHHHHC-CCTTBCCEEEEEECSSE
T ss_pred cchhccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccc---cchHHHHHHHHHHHhC-CCCCeeehhhhcccCCE
Confidence 4677899999999999999999999999999999999975432 2235678999999999 79999999999999999
Q ss_pred EEEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccC
Q 042823 99 VHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFE 178 (477)
Q Consensus 99 ~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~ 178 (477)
+|+||||++|++|.+++...+.+++..+..++.|++.||.|||++||+||||||+||++...+..+.+||+|||++....
T Consensus 81 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~ 160 (304)
T 2jam_A 81 YYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQ 160 (304)
T ss_dssp EEEEECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCC
T ss_pred EEEEEEcCCCccHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEecCCCCCCEEEccCCcceecC
Confidence 99999999999999999988899999999999999999999999999999999999998655677889999999987654
Q ss_pred CCcceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCCCCHHHH
Q 042823 179 EGQVYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAK 257 (477)
Q Consensus 179 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 257 (477)
.. ......||+.|+|||++.+ .++.++|||||||++|+|++|.+||...........+..+...++...++.+|+.+.
T Consensus 161 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 239 (304)
T 2jam_A 161 NG-IMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGYYEFESPFWDDISESAK 239 (304)
T ss_dssp CB-TTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHCCCCCCTTTTTTSCHHHH
T ss_pred CC-ccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCCccccccCCHHHH
Confidence 32 2334579999999999865 588999999999999999999999999888888888888887777777788999999
Q ss_pred HHHHHhcccCccccCCHHHHhcCcccCcCCC
Q 042823 258 DLVRRMLTKDPKRRITAAQVLEHPWLRESGE 288 (477)
Q Consensus 258 ~li~~~l~~dp~~R~s~~~~l~h~~~~~~~~ 288 (477)
+||.+||..||++|||+.++++||||.....
T Consensus 240 ~li~~~l~~dp~~Rps~~~~l~h~~~~~~~~ 270 (304)
T 2jam_A 240 DFICHLLEKDPNERYTCEKALSHPWIDGNTA 270 (304)
T ss_dssp HHHHHHHCSSTTTSCCHHHHHTSHHHHSSCS
T ss_pred HHHHHHcCCChhHCcCHHHHhcCccccCCCc
Confidence 9999999999999999999999999986543
|
| >2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-51 Score=388.44 Aligned_cols=267 Identities=39% Similarity=0.704 Sum_probs=239.1
Q ss_pred cccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCC
Q 042823 18 YEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDET 97 (477)
Q Consensus 18 ~~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~ 97 (477)
...+.++|++++.||+|+||.||+|.++.+++.||+|++...... ......+.+|+.++.++ +||||+++++++....
T Consensus 17 ~~~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~-~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~ 94 (287)
T 2wei_A 17 QGTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAK-NKDTSTILREVELLKKL-DHPNIMKLFEILEDSS 94 (287)
T ss_dssp THHHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBS-SSCHHHHHHHHHHHHTC-CCTTBCCEEEEEECSS
T ss_pred HHHHhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccc-hHHHHHHHHHHHHHHhc-cCCCccEEEEEEeCCC
Confidence 456778999999999999999999999999999999998754322 23456788999999999 7999999999999999
Q ss_pred eEEEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCcccc
Q 042823 98 AVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLF 177 (477)
Q Consensus 98 ~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~ 177 (477)
.+|+||||++|++|.+++...+.+++..+..++.||+.||.|||++|++||||||+||++...+....+||+|||++...
T Consensus 95 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~ 174 (287)
T 2wei_A 95 SFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCF 174 (287)
T ss_dssp EEEEEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECSTTGGGTB
T ss_pred eEEEEEEccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCChhhEEEecCCCcccEEEeccCcceee
Confidence 99999999999999999998889999999999999999999999999999999999999955445568999999999877
Q ss_pred CCCcceecccccccccchhhhhhhcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCCCCHHHH
Q 042823 178 EEGQVYRDIVGSGFYIAPEVLRRRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAK 257 (477)
Q Consensus 178 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 257 (477)
..........||+.|+|||++.+.++.++||||||+++|+|++|..||.+.+.......+..+...++.+.++.+|+++.
T Consensus 175 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (287)
T 2wei_A 175 QQNTKMKDRIGTAYYIAPEVLRGTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAK 254 (287)
T ss_dssp CCCSSCSCHHHHHTTCCHHHHTTCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCSGGGTTSCHHHH
T ss_pred cCCCccccccCcccccChHHhcCCCCCchhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCchhhhhcCHHHH
Confidence 65554455678999999999998899999999999999999999999999888888888888877766666678999999
Q ss_pred HHHHHhcccCccccCCHHHHhcCcccCcC
Q 042823 258 DLVRRMLTKDPKRRITAAQVLEHPWLRES 286 (477)
Q Consensus 258 ~li~~~l~~dp~~R~s~~~~l~h~~~~~~ 286 (477)
++|.+||+.||++|||+.++++||||+..
T Consensus 255 ~li~~~l~~dp~~Rps~~ell~hp~~~~~ 283 (287)
T 2wei_A 255 DLIRKMLTFHPSLRITATQCLEHPWIQKY 283 (287)
T ss_dssp HHHHHHTCSSGGGSCCHHHHHHSHHHHHH
T ss_pred HHHHHHcccChhhCcCHHHHhcCHHHhcc
Confidence 99999999999999999999999999754
|
| >3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-50 Score=391.41 Aligned_cols=261 Identities=28% Similarity=0.499 Sum_probs=218.5
Q ss_pred cccccccccccccccccCCeEEEEEEEc---cCCceEEEEEeecCCcc-chhhHHHHHHHHHHHHhccCCCCeeEEEEEE
Q 042823 18 YEDVMLHYFFGRMLGRGQFGVSYLCTEN---STNRPYACKSIAKKPKM-RLAENDMIRREIQIRLYLSGQPNVVEFKSTY 93 (477)
Q Consensus 18 ~~~~~~~Y~~~~~iG~G~~g~V~~~~~~---~~~~~~aiK~~~~~~~~-~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~ 93 (477)
.....++|++.+.||+|+||.||+|++. .+++.||+|++.+.... .......+.+|+.++..+ +||||+++++++
T Consensus 12 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~ 90 (327)
T 3a62_A 12 EKIRPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV-KHPFIVDLIYAF 90 (327)
T ss_dssp -CCCGGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHC-CCTTBCCEEEEE
T ss_pred CCCCHHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhC-CCCCccceeEEE
Confidence 3445678999999999999999999985 68999999999764321 122345677899999999 699999999999
Q ss_pred EeCCeEEEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCC
Q 042823 94 EDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGS 173 (477)
Q Consensus 94 ~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~ 173 (477)
...+.+|+|||||+||+|.+++...+.+++..+..++.||+.||.|||++||+||||||+||++ +.++.+||+|||+
T Consensus 91 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~Nill---~~~~~~kl~Dfg~ 167 (327)
T 3a62_A 91 QTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIML---NHQGHVKLTDFGL 167 (327)
T ss_dssp ECSSCEEEEEECCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEE---CTTSCEEECCCSC
T ss_pred EcCCEEEEEEeCCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCEEcccCCHHHeEE---CCCCcEEEEeCCc
Confidence 9999999999999999999999998899999999999999999999999999999999999999 7788999999999
Q ss_pred ccccCC-Ccceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCC
Q 042823 174 ALLFEE-GQVYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPS 251 (477)
Q Consensus 174 a~~~~~-~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 251 (477)
+..... .......+||+.|+|||++.+ .++.++|||||||++|+|++|.+||.+.+.......+......++ +.
T Consensus 168 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~p----~~ 243 (327)
T 3a62_A 168 CKESIHDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLP----PY 243 (327)
T ss_dssp C----------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCCCC----TT
T ss_pred ccccccCCccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCC----CC
Confidence 875432 223345689999999999865 589999999999999999999999999888888888887765543 46
Q ss_pred CCHHHHHHHHHhcccCccccC-----CHHHHhcCcccCcC
Q 042823 252 ISSTAKDLVRRMLTKDPKRRI-----TAAQVLEHPWLRES 286 (477)
Q Consensus 252 ~~~~~~~li~~~l~~dp~~R~-----s~~~~l~h~~~~~~ 286 (477)
+++++++||.+||+.||.+|| ++.++++||||+..
T Consensus 244 ~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~hp~f~~~ 283 (327)
T 3a62_A 244 LTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAHPFFRHI 283 (327)
T ss_dssp SCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHHSGGGSSC
T ss_pred CCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHcCCcccCC
Confidence 799999999999999999999 89999999999754
|
| >3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-51 Score=395.32 Aligned_cols=260 Identities=29% Similarity=0.534 Sum_probs=219.9
Q ss_pred cccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeE
Q 042823 20 DVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAV 99 (477)
Q Consensus 20 ~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~ 99 (477)
.+.++|++++.||+|+||+||+|.++.+++.||+|++...... .....+.+|+.++..+ +||||+++++++.+.+..
T Consensus 4 ~~~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l-~hpnIv~~~~~~~~~~~~ 80 (323)
T 3tki_A 4 PFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICINKML-NHENVVKFYGHRREGNIQ 80 (323)
T ss_dssp TTTTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC---------CHHHHHHHHHHC-CCTTBCCEEEEEECSSEE
T ss_pred cHhhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEccccc--chHHHHHHHHHHHHhC-CCCCCCeEEEEEecCCeE
Confidence 4678999999999999999999999999999999998654322 2235678999999999 799999999999999999
Q ss_pred EEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCC
Q 042823 100 HVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEE 179 (477)
Q Consensus 100 ~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~ 179 (477)
|+|||||+||+|.+++.....+++.++..++.||+.||.|||++||+||||||+||++ +..+.+||+|||++.....
T Consensus 81 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll---~~~~~~kl~Dfg~a~~~~~ 157 (323)
T 3tki_A 81 YLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL---DERDNLKISDFGLATVFRY 157 (323)
T ss_dssp EEEEECCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE---CTTCCEEECCCTTCEECEE
T ss_pred EEEEEcCCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccccchHHEEE---eCCCCEEEEEeeccceecc
Confidence 9999999999999999888889999999999999999999999999999999999999 7778999999999976533
Q ss_pred Cc---ceecccccccccchhhhhhh--cCCccchHhHHHHHHHHhhCCCCCCCCChhhH-HHHHHcCCccCCCCCCCCCC
Q 042823 180 GQ---VYRDIVGSGFYIAPEVLRRR--YGKEIDIWSAGVILYILLSGVPPFWAETKKGT-YDAILQGEIDFDTDPWPSIS 253 (477)
Q Consensus 180 ~~---~~~~~~gt~~y~aPE~~~~~--~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~-~~~i~~~~~~~~~~~~~~~~ 253 (477)
.. ......||+.|+|||++.+. ++.++|||||||++|+|++|..||........ ......... ....+..++
T Consensus 158 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 235 (323)
T 3tki_A 158 NNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKT--YLNPWKKID 235 (323)
T ss_dssp TTEECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHHHHHHTTCT--TSTTGGGSC
T ss_pred CCcccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhcccc--cCCccccCC
Confidence 22 23456899999999998753 37789999999999999999999987665433 333333322 223356789
Q ss_pred HHHHHHHHHhcccCccccCCHHHHhcCcccCcCC
Q 042823 254 STAKDLVRRMLTKDPKRRITAAQVLEHPWLRESG 287 (477)
Q Consensus 254 ~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~~ 287 (477)
+.+.+||.+||+.||++|||+.|+++||||+...
T Consensus 236 ~~~~~li~~~L~~dP~~R~t~~eil~h~~~~~~~ 269 (323)
T 3tki_A 236 SAPLALLHKILVENPSARITIPDIKKDRWYNKPL 269 (323)
T ss_dssp HHHHHHHHHHSCSSTTTSCCHHHHTTCTTTTCCC
T ss_pred HHHHHHHHHHccCChhhCcCHHHHhhChhhcccc
Confidence 9999999999999999999999999999998653
|
| >2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-51 Score=418.98 Aligned_cols=259 Identities=31% Similarity=0.482 Sum_probs=225.1
Q ss_pred cccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeE
Q 042823 20 DVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAV 99 (477)
Q Consensus 20 ~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~ 99 (477)
.-.++|.+.+.||+|+||.||+|.++.+|+.||+|++.+...........+.+|+.++..+ +||||+++++++++...+
T Consensus 181 ~~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l-~hp~Iv~l~~~~~~~~~l 259 (576)
T 2acx_A 181 VTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKV-NSRFVVSLAYAYETKDAL 259 (576)
T ss_dssp CCGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHC-CCTTBCCEEEEEECSSEE
T ss_pred ccccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHc-CCCCEeeEEEEEeeCCEE
Confidence 3456799999999999999999999999999999999764322223456678999999999 799999999999999999
Q ss_pred EEEEeccCCCchHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCcccc
Q 042823 100 HVVMELCEGGDLFDRIIAKGY--NSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLF 177 (477)
Q Consensus 100 ~lv~e~~~gg~L~~~l~~~~~--~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~ 177 (477)
|+|||||+||+|.+++...+. +++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++...
T Consensus 260 ~lVmEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIvHrDLKPeNILl---d~~g~vKL~DFGla~~~ 336 (576)
T 2acx_A 260 CLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILL---DDHGHIRISDLGLAVHV 336 (576)
T ss_dssp EEEECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE---CTTSCEEECCCTTCEEC
T ss_pred EEEEEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeccCCchheEEE---eCCCCeEEEecccceec
Confidence 999999999999999987543 8999999999999999999999999999999999999 78889999999999887
Q ss_pred CCCcceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCCh----hhHHHHHHcCCccCCCCCCCCC
Q 042823 178 EEGQVYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETK----KGTYDAILQGEIDFDTDPWPSI 252 (477)
Q Consensus 178 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~----~~~~~~i~~~~~~~~~~~~~~~ 252 (477)
.........+||+.|+|||++.+ .|+.++|||||||++|+|++|.+||.+... ......+......+ ...+
T Consensus 337 ~~~~~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~~i~~~i~~~~~~~----p~~~ 412 (576)
T 2acx_A 337 PEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEEY----SERF 412 (576)
T ss_dssp CTTCCEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHHHHHHHHHHCCCCC----CTTS
T ss_pred ccCccccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchhHHHHHHHhhcccccC----CccC
Confidence 66655666799999999999875 689999999999999999999999987643 33444444443333 2468
Q ss_pred CHHHHHHHHHhcccCccccC-----CHHHHhcCcccCcC
Q 042823 253 SSTAKDLVRRMLTKDPKRRI-----TAAQVLEHPWLRES 286 (477)
Q Consensus 253 ~~~~~~li~~~l~~dp~~R~-----s~~~~l~h~~~~~~ 286 (477)
|+++++||.+||+.||.+|| ++.++++||||+..
T Consensus 413 s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~HpfF~~i 451 (576)
T 2acx_A 413 SPQARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFKKL 451 (576)
T ss_dssp CHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHTSGGGTTC
T ss_pred CHHHHHHHHHhccCCHHHcCCCCCCCHHHHHhChhhccC
Confidence 99999999999999999999 89999999999864
|
| >3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.4e-51 Score=394.45 Aligned_cols=269 Identities=28% Similarity=0.428 Sum_probs=214.7
Q ss_pred cccccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEe
Q 042823 16 KAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYED 95 (477)
Q Consensus 16 ~~~~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~ 95 (477)
.+.....++|++++.||+|+||+||+|.+..+++.||+|++..... .......+.+|+.++..+ +||||+++++++.+
T Consensus 27 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~ 104 (329)
T 3gbz_A 27 APSATSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHE-EEGVPGTAIREVSLLKEL-QHRNIIELKSVIHH 104 (329)
T ss_dssp -----CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC---------CHHHHHHGGGC-CCTTBCCEEEEEEE
T ss_pred CCcccchhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEccccc-ccccchhHHHHHHHHHHc-CCCCcceEEEEEec
Confidence 3556777899999999999999999999999999999999865432 223345667899999999 79999999999999
Q ss_pred CCeEEEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeec--CCCCCEEEeecCC
Q 042823 96 ETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISR--DDNALLKVTDFGS 173 (477)
Q Consensus 96 ~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~--~~~~~~kl~Dfg~ 173 (477)
+..+|+|||||+| +|.+++...+.+++..++.++.||+.||.|||++||+||||||+||++... +..+.+||+|||+
T Consensus 105 ~~~~~lv~e~~~~-~L~~~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~ 183 (329)
T 3gbz_A 105 NHRLHLIFEYAEN-DLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGL 183 (329)
T ss_dssp TTEEEEEEECCSE-EHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEC-----CCEEEECCTTH
T ss_pred CCEEEEEEecCCC-CHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCEECCCCCHHHEEEecCCCCccceEEECcCCC
Confidence 9999999999985 999999999899999999999999999999999999999999999999543 2345699999999
Q ss_pred ccccCCC-cceecccccccccchhhhhh--hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCC
Q 042823 174 ALLFEEG-QVYRDIVGSGFYIAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWP 250 (477)
Q Consensus 174 a~~~~~~-~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~ 250 (477)
+...... .......||+.|+|||++.+ .++.++|||||||++|+|++|.+||.+.........+.......+...|+
T Consensus 184 a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (329)
T 3gbz_A 184 ARAFGIPIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTWP 263 (329)
T ss_dssp HHHHC-----------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTST
T ss_pred ccccCCcccccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHHHHHHHHHhCCCchhhhh
Confidence 9765432 23345578999999999875 48999999999999999999999999888777776665432111111111
Q ss_pred --------------------------CCCHHHHHHHHHhcccCccccCCHHHHhcCcccCcCC
Q 042823 251 --------------------------SISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESG 287 (477)
Q Consensus 251 --------------------------~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~~ 287 (477)
.+++++.+||.+||+.||.+|||+.++|+||||+...
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~ 326 (329)
T 3gbz_A 264 GVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEHPYFSHND 326 (329)
T ss_dssp TGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSSSC
T ss_pred hhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhCCcccCCCC
Confidence 1689999999999999999999999999999998754
|
| >4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-51 Score=412.79 Aligned_cols=260 Identities=31% Similarity=0.515 Sum_probs=220.3
Q ss_pred ccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCe
Q 042823 19 EDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETA 98 (477)
Q Consensus 19 ~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~ 98 (477)
....++|++++.||+|+||.||+|.++.+++.||+|++.+...........+.+|+.++..+ +||||+++++++...+.
T Consensus 144 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~l~~~~~~~~~ 222 (446)
T 4ejn_A 144 RVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNS-RHPFLTALKYSFQTHDR 222 (446)
T ss_dssp CCCGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCC-SCTTSCCEEEEEEETTE
T ss_pred CCChHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhC-CCCeEeeEEEEEeeCCE
Confidence 34567899999999999999999999999999999999754322333445677888888888 69999999999999999
Q ss_pred EEEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH-cCCeeccCCCCceeeeecCCCCCEEEeecCCcccc
Q 042823 99 VHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHS-MGVMHRDLKPENFSFISRDDNALLKVTDFGSALLF 177 (477)
Q Consensus 99 ~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~-~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~ 177 (477)
+|+|||||+||+|.+++...+.+++..+..++.||+.||.|||+ +||+||||||+|||+ +.++.+||+|||+|...
T Consensus 223 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~giiHrDlkp~NIll---~~~~~~kl~DFG~a~~~ 299 (446)
T 4ejn_A 223 LCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLML---DKDGHIKITDFGLCKEG 299 (446)
T ss_dssp EEEEECCCSSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCCCGGGEEE---CSSSCEEECCCCCCCTT
T ss_pred EEEEEeeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCCEEECCCCHHHEEE---CCCCCEEEccCCCceec
Confidence 99999999999999999998999999999999999999999998 999999999999999 77889999999999764
Q ss_pred C-CCcceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCCCCHH
Q 042823 178 E-EGQVYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISST 255 (477)
Q Consensus 178 ~-~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 255 (477)
. ........+||+.|+|||++.+ .|+.++|||||||++|+|++|.+||.+.........+......++ +.++++
T Consensus 300 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p----~~~~~~ 375 (446)
T 4ejn_A 300 IKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFP----RTLGPE 375 (446)
T ss_dssp CC-----CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCC----TTSCHH
T ss_pred cCCCcccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHHhCCCCCC----ccCCHH
Confidence 3 2333456789999999999864 689999999999999999999999999888888888887766554 357999
Q ss_pred HHHHHHHhcccCccccC-----CHHHHhcCcccCcC
Q 042823 256 AKDLVRRMLTKDPKRRI-----TAAQVLEHPWLRES 286 (477)
Q Consensus 256 ~~~li~~~l~~dp~~R~-----s~~~~l~h~~~~~~ 286 (477)
+.+||.+||+.||.+|| |+.++++||||...
T Consensus 376 ~~~li~~~L~~dP~~R~~~~~~t~~ell~hp~f~~~ 411 (446)
T 4ejn_A 376 AKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGI 411 (446)
T ss_dssp HHHHHHHHTCSSTTTSTTCSTTTHHHHHTSGGGTTC
T ss_pred HHHHHHHHcccCHHHhCCCCCCCHHHHHhCccccCC
Confidence 99999999999999999 99999999999864
|
| >2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-50 Score=390.85 Aligned_cols=260 Identities=25% Similarity=0.376 Sum_probs=206.6
Q ss_pred cccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEE
Q 042823 22 MLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHV 101 (477)
Q Consensus 22 ~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~l 101 (477)
.++|++++.||+|+||.||+|.++.+++.||+|++..... ......+.+|+.++..+ +||||+++++++.+++.+|+
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~~l 80 (317)
T 2pmi_A 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSE--EGTPSTAIREISLMKEL-KHENIVRLYDVIHTENKLTL 80 (317)
T ss_dssp ---------------CEEEEEECSSSCCEEEEEEEECCST--TCSCHHHHHHHHHHTTC-CBTTBCCEEEEECCTTEEEE
T ss_pred ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccc--cccHHHHHHHHHHHHhc-CCCCcceEEEEEEECCeEEE
Confidence 4689999999999999999999999999999999975432 12335677899999999 79999999999999999999
Q ss_pred EEeccCCCchHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCcc
Q 042823 102 VMELCEGGDLFDRIIAK------GYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSAL 175 (477)
Q Consensus 102 v~e~~~gg~L~~~l~~~------~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~ 175 (477)
|||||+| +|.+++... ..+++..+..++.||+.||.|||++||+||||||+||++ +.++.+||+|||++.
T Consensus 81 v~e~~~~-~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~---~~~~~~kl~Dfg~~~ 156 (317)
T 2pmi_A 81 VFEFMDN-DLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENKILHRDLKPQNLLI---NKRGQLKLGDFGLAR 156 (317)
T ss_dssp EEECCCC-BHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE---CTTCCEEECCCSSCE
T ss_pred EEEecCC-CHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCChHHeEE---cCCCCEEECcCccce
Confidence 9999985 999998764 358999999999999999999999999999999999999 778899999999998
Q ss_pred ccCCC-cceecccccccccchhhhhh--hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCC------
Q 042823 176 LFEEG-QVYRDIVGSGFYIAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDT------ 246 (477)
Q Consensus 176 ~~~~~-~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~------ 246 (477)
..... .......||+.|+|||++.+ .++.++|||||||++|+|++|.+||.+.+.......+.......+.
T Consensus 157 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 236 (317)
T 2pmi_A 157 AFGIPVNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSV 236 (317)
T ss_dssp ETTSCCCCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCTTTCGGG
T ss_pred ecCCCcccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhHhhhh
Confidence 76432 23345689999999999865 5899999999999999999999999988877776665432111000
Q ss_pred ------------------------CCCCCCCHHHHHHHHHhcccCccccCCHHHHhcCcccCcCCC
Q 042823 247 ------------------------DPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGE 288 (477)
Q Consensus 247 ------------------------~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~~~ 288 (477)
.....+++++.+||.+||+.||++|||+.++|+||||++...
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~~ 302 (317)
T 2pmi_A 237 TKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHHPWFAEYYH 302 (317)
T ss_dssp GGCTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGGGGCC
T ss_pred hhhhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhCChhhhcccc
Confidence 011257889999999999999999999999999999987654
|
| >1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8.7e-51 Score=386.53 Aligned_cols=257 Identities=29% Similarity=0.436 Sum_probs=212.9
Q ss_pred ccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 042823 23 LHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVV 102 (477)
Q Consensus 23 ~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~lv 102 (477)
++|++++.||+|+||+||+|.+ .+++.||+|++..... .......+.+|+.++..+ +||||+++++++.+.+.+|+|
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~-~~~~~~aiK~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv 78 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQN-NYGETFALKKIRLEKE-DEGIPSTTIREISILKEL-KHSNIVKLYDVIHTKKRLVLV 78 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEE-TTSCEEEEEEECCSSG-GGCCCHHHHHHHHGGGGC-CCTTBCCEEEEEECSSCEEEE
T ss_pred ccchhhhhcccCCCEEEEEEEc-CCCCEEEEEEEecccc-ccccchhHHHHHHHHHhc-CCCCEeeeeeEEccCCeEEEE
Confidence 6899999999999999999998 6789999999865432 222345678999999999 799999999999999999999
Q ss_pred EeccCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCCC-
Q 042823 103 MELCEGGDLFDRIIAK-GYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEG- 180 (477)
Q Consensus 103 ~e~~~gg~L~~~l~~~-~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~- 180 (477)
|||+++ +|.+++... +.+++..+..++.||+.||.|||++||+||||||+||++ +.++.+||+|||++......
T Consensus 79 ~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~---~~~~~~kl~Dfg~~~~~~~~~ 154 (288)
T 1ob3_A 79 FEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLI---NREGELKIADFGLARAFGIPV 154 (288)
T ss_dssp EECCSE-EHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE---CTTSCEEECCTTHHHHHCC--
T ss_pred EEecCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE---cCCCCEEEeECccccccCccc
Confidence 999986 999988764 678999999999999999999999999999999999999 77889999999998765432
Q ss_pred cceecccccccccchhhhhh--hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCC------------
Q 042823 181 QVYRDIVGSGFYIAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDT------------ 246 (477)
Q Consensus 181 ~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~------------ 246 (477)
.......||+.|+|||++.+ .++.++|||||||++|+|++|.+||.+.+.......+.+.......
T Consensus 155 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (288)
T 1ob3_A 155 RKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKY 234 (288)
T ss_dssp -------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTC
T ss_pred cccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHCCCChhhchhhhccccc
Confidence 22344578999999999864 4899999999999999999999999988777666655432110000
Q ss_pred -------------CCCCCCCHHHHHHHHHhcccCccccCCHHHHhcCcccCcC
Q 042823 247 -------------DPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRES 286 (477)
Q Consensus 247 -------------~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~ 286 (477)
...+.+++++.+||.+||+.||++|||+.++|+||||++.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~ 287 (288)
T 1ob3_A 235 DPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKEN 287 (288)
T ss_dssp CTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGGC-
T ss_pred ccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhcCcchhhc
Confidence 0123578999999999999999999999999999999753
|
| >3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-51 Score=411.71 Aligned_cols=265 Identities=34% Similarity=0.620 Sum_probs=219.4
Q ss_pred ccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCcc-----chhhHHHHHHHHHHHHhccCCCCeeEEEEEE
Q 042823 19 EDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKM-----RLAENDMIRREIQIRLYLSGQPNVVEFKSTY 93 (477)
Q Consensus 19 ~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~-----~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~ 93 (477)
..+.++|.+.+.||+|+||.||+|.++.+++.||+|++.+.... .......+.+|+.++.++ +||||+++++++
T Consensus 131 ~~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~ 209 (419)
T 3i6u_A 131 KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKL-NHPCIIKIKNFF 209 (419)
T ss_dssp HHHHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHC-CCTTBCCCCEEE
T ss_pred hhhhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhC-CCCCEeeEEEEE
Confidence 35678999999999999999999999999999999999764321 111223478899999999 799999999998
Q ss_pred EeCCeEEEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCC
Q 042823 94 EDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGS 173 (477)
Q Consensus 94 ~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~ 173 (477)
.. ..+|+|||||+||+|.+++...+.+++.+++.++.|++.||.|||++||+||||||+|||+...+....+||+|||+
T Consensus 210 ~~-~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~NIll~~~~~~~~~kl~DFG~ 288 (419)
T 3i6u_A 210 DA-EDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGH 288 (419)
T ss_dssp ES-SEEEEEEECCTTCBGGGGTSSSCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSSSCCEEECCSST
T ss_pred ec-CceEEEEEcCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEecCCCcceEEEeeccc
Confidence 64 45899999999999999998888999999999999999999999999999999999999996555566799999999
Q ss_pred ccccCCCcceecccccccccchhhhh----hhcCCccchHhHHHHHHHHhhCCCCCCCCCh-hhHHHHHHcCCccCCCCC
Q 042823 174 ALLFEEGQVYRDIVGSGFYIAPEVLR----RRYGKEIDIWSAGVILYILLSGVPPFWAETK-KGTYDAILQGEIDFDTDP 248 (477)
Q Consensus 174 a~~~~~~~~~~~~~gt~~y~aPE~~~----~~~~~~~DiwslG~il~~l~tg~~pf~~~~~-~~~~~~i~~~~~~~~~~~ 248 (477)
+............+||+.|+|||++. ..|+.++|||||||++|+|++|.+||..... ......+..+...+.+..
T Consensus 289 a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~i~~~~~~~~~~~ 368 (419)
T 3i6u_A 289 SKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEV 368 (419)
T ss_dssp TTSCC-----------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSCCHHHHHHTTCCCCCHHH
T ss_pred ceecCCCccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchHHHHHHHhcCCCCCCchh
Confidence 98876655556678999999999984 3578899999999999999999999976543 345556666666665555
Q ss_pred CCCCCHHHHHHHHHhcccCccccCCHHHHhcCcccCc
Q 042823 249 WPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRE 285 (477)
Q Consensus 249 ~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~ 285 (477)
|+.+++.+.+||.+||+.||++|||+.++|+||||+.
T Consensus 369 ~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~~~~ 405 (419)
T 3i6u_A 369 WAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQD 405 (419)
T ss_dssp HTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGCC
T ss_pred hcccCHHHHHHHHHHccCChhHCcCHHHHhCCcccCC
Confidence 6789999999999999999999999999999999975
|
| >3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-50 Score=383.64 Aligned_cols=262 Identities=31% Similarity=0.559 Sum_probs=226.2
Q ss_pred ccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCe
Q 042823 19 EDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETA 98 (477)
Q Consensus 19 ~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~ 98 (477)
.-..++|++++.||+|+||.||+|.+..+++.||+|++.............+.+|+.++..+ +||||+++++++.+...
T Consensus 5 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~ 83 (279)
T 3fdn_A 5 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL-RHPNILRLYGYFHDATR 83 (279)
T ss_dssp CCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTC-CCTTBCCEEEEEECSSE
T ss_pred eeecccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcC-CCCCCcchhheEecCCE
Confidence 33457899999999999999999999999999999998654322223356788999999999 69999999999999999
Q ss_pred EEEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccC
Q 042823 99 VHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFE 178 (477)
Q Consensus 99 ~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~ 178 (477)
.|+||||+++|+|.+++.....+++..+..++.|++.||.|||++||+||||||+||++ +.++.+||+|||++....
T Consensus 84 ~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~dlkp~Nili---~~~~~~~l~Dfg~~~~~~ 160 (279)
T 3fdn_A 84 VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLL---GSAGELKIADFGWSVHAP 160 (279)
T ss_dssp EEEEECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTTCEECCCCGGGEEE---CTTSCEEECSCCEESCC-
T ss_pred EEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCEecccCChHhEEE---cCCCCEEEEeccccccCC
Confidence 99999999999999999998899999999999999999999999999999999999999 778899999999886544
Q ss_pred CCcceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCCCCHHHH
Q 042823 179 EGQVYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAK 257 (477)
Q Consensus 179 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 257 (477)
.. ......||+.|+|||++.+ .++.++||||||+++|+|++|..||...........+......++ ..+++.+.
T Consensus 161 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~ 235 (279)
T 3fdn_A 161 SS-RRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGAR 235 (279)
T ss_dssp --------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCCC----TTSCHHHH
T ss_pred cc-cccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHHHHHHHHHhCCCCCC----CcCCHHHH
Confidence 32 2345679999999999875 578899999999999999999999998888888777777655443 35789999
Q ss_pred HHHHHhcccCccccCCHHHHhcCcccCcCCCC
Q 042823 258 DLVRRMLTKDPKRRITAAQVLEHPWLRESGEA 289 (477)
Q Consensus 258 ~li~~~l~~dp~~R~s~~~~l~h~~~~~~~~~ 289 (477)
+||.+||+.||.+|||+.++++||||+.....
T Consensus 236 ~li~~~l~~~p~~Rps~~e~l~h~~~~~~~~~ 267 (279)
T 3fdn_A 236 DLISRLLKHNPSQRPMLREVLEHPWITANSSK 267 (279)
T ss_dssp HHHHHHCCSSGGGSCCHHHHHHCHHHHHHCSS
T ss_pred HHHHHHhccChhhCCCHHHHhhCccccCCccC
Confidence 99999999999999999999999999865443
|
| >3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-50 Score=383.88 Aligned_cols=265 Identities=39% Similarity=0.673 Sum_probs=227.7
Q ss_pred ccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccc---hhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCC
Q 042823 21 VMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMR---LAENDMIRREIQIRLYLSGQPNVVEFKSTYEDET 97 (477)
Q Consensus 21 ~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~---~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~ 97 (477)
+.++|++++.||+|+||.||+|.++.+++.||+|++....... ......+.+|+.++..+ +||||+++++++.+..
T Consensus 3 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~ 81 (283)
T 3bhy_A 3 VEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREI-RHPNIITLHDIFENKT 81 (283)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHC-CCTTBCCEEEEEECSS
T ss_pred hhhhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhC-CCCCeeehhheecCCC
Confidence 4578999999999999999999999999999999987653221 12357789999999999 6999999999999999
Q ss_pred eEEEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecC-CCCCEEEeecCCccc
Q 042823 98 AVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRD-DNALLKVTDFGSALL 176 (477)
Q Consensus 98 ~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~-~~~~~kl~Dfg~a~~ 176 (477)
..|+||||++|++|.+++.....+++..+..++.||+.||.|||++|++||||||+||++...+ ....+||+|||++..
T Consensus 82 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~~ 161 (283)
T 3bhy_A 82 DVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHK 161 (283)
T ss_dssp EEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSSSSCCEEECCCTTCEE
T ss_pred eEEEEEeecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChHHEEEecCCCCCCceEEEeccccee
Confidence 9999999999999999999888899999999999999999999999999999999999993322 123799999999987
Q ss_pred cCCCcceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCCCCHH
Q 042823 177 FEEGQVYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISST 255 (477)
Q Consensus 177 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 255 (477)
...........||+.|+|||++.+ .++.++||||||+++|+|++|..||.+.........+......++...++.+++.
T Consensus 162 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (283)
T 3bhy_A 162 IEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNTSEL 241 (283)
T ss_dssp CC--------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCCCCCHHHHTTCCHH
T ss_pred ccCCCcccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchHHHHHHhHhcccCCcchhcccCCHH
Confidence 765555556679999999999874 6899999999999999999999999998888888887777665554445678999
Q ss_pred HHHHHHHhcccCccccCCHHHHhcCcccCcC
Q 042823 256 AKDLVRRMLTKDPKRRITAAQVLEHPWLRES 286 (477)
Q Consensus 256 ~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~ 286 (477)
+.++|.+||..||++|||+.++++||||+..
T Consensus 242 ~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~ 272 (283)
T 3bhy_A 242 AKDFIRRLLVKDPKRRMTIAQSLEHSWIKAI 272 (283)
T ss_dssp HHHHHHTTSCSSGGGSCCHHHHHHCHHHHHH
T ss_pred HHHHHHHHccCCHhHCcCHHHHHhCHHHHHH
Confidence 9999999999999999999999999999754
|
| >4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-50 Score=387.67 Aligned_cols=263 Identities=29% Similarity=0.484 Sum_probs=217.3
Q ss_pred ccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEE
Q 042823 21 VMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVH 100 (477)
Q Consensus 21 ~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~ 100 (477)
+.++|++++.||+|+||+||+|.+..+|+.||+|++..... .......+.+|+.++..+ +||||+++++++.+.+..+
T Consensus 1 l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~ 78 (311)
T 4agu_A 1 MMEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESED-DPVIKKIALREIRMLKQL-KHPNLVNLLEVFRRKRRLH 78 (311)
T ss_dssp --CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC--HHHHHHHHHHHHHHHHC-CCTTBCCEEEEEEETTEEE
T ss_pred CcccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeecccc-chHHHHHHHHHHHHHHhC-CCCCccchhheeecCCeEE
Confidence 35789999999999999999999999999999999865432 333456778999999999 6999999999999999999
Q ss_pred EEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCCC
Q 042823 101 VVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEG 180 (477)
Q Consensus 101 lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~ 180 (477)
+|||||++++|.+++...+.+++..+..++.|++.||.|||++||+||||||+||++ +.++.+||+|||++......
T Consensus 79 lv~e~~~~~~l~~~~~~~~~~~~~~~~~i~~~l~~~l~~lH~~~ivH~dlkp~Nil~---~~~~~~kl~Dfg~~~~~~~~ 155 (311)
T 4agu_A 79 LVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKHNCIHRDVKPENILI---TKHSVIKLCDFGFARLLTGP 155 (311)
T ss_dssp EEEECCSEEHHHHHHHTSSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE---CTTSCEEECCCTTCEECC--
T ss_pred EEEEeCCCchHHHHHhhhcCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCChhhEEE---cCCCCEEEeeCCCchhccCc
Confidence 999999999999988888889999999999999999999999999999999999999 77889999999999876533
Q ss_pred -cceecccccccccchhhhhh--hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCc---------------
Q 042823 181 -QVYRDIVGSGFYIAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEI--------------- 242 (477)
Q Consensus 181 -~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~--------------- 242 (477)
.......||+.|+|||++.+ .++.++|||||||++|+|++|.+||.+.........+.....
T Consensus 156 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (311)
T 4agu_A 156 SDYYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQY 235 (311)
T ss_dssp ----------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHTCGG
T ss_pred ccccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhcccccccccccccccc
Confidence 23345689999999999864 579999999999999999999999988877665554432110
Q ss_pred ----cCCCC--------CCCCCCHHHHHHHHHhcccCccccCCHHHHhcCcccCcCCC
Q 042823 243 ----DFDTD--------PWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGE 288 (477)
Q Consensus 243 ----~~~~~--------~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~~~ 288 (477)
..+.. .++.+|+.+.+||.+||+.||.+|||+.++|+||||++...
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~~ 293 (311)
T 4agu_A 236 FSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHHPYFENIRE 293 (311)
T ss_dssp GTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHTSGGGTTCC-
T ss_pred cccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhcChHHHhccC
Confidence 00100 12568999999999999999999999999999999987654
|
| >2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-50 Score=387.87 Aligned_cols=257 Identities=30% Similarity=0.536 Sum_probs=216.7
Q ss_pred ccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccc-----------------------hhhHHHHHHHHHHH
Q 042823 21 VMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMR-----------------------LAENDMIRREIQIR 77 (477)
Q Consensus 21 ~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~-----------------------~~~~~~~~~e~~~~ 77 (477)
..++|++.+.||+|+||.||+|.+..+++.||+|++....... ......+.+|+.++
T Consensus 11 ~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l 90 (298)
T 2zv2_A 11 QLNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAIL 90 (298)
T ss_dssp EETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHH
T ss_pred eecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHH
Confidence 4568999999999999999999999999999999987543211 11235678999999
Q ss_pred HhccCCCCeeEEEEEEEe--CCeEEEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCce
Q 042823 78 LYLSGQPNVVEFKSTYED--ETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENF 155 (477)
Q Consensus 78 ~~l~~hpniv~~~~~~~~--~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Ni 155 (477)
..+ +||||+++++++.+ ...+|+||||+++++|.+++ ..+.+++.++..++.||+.||.|||++||+||||||+||
T Consensus 91 ~~l-~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Ni 168 (298)
T 2zv2_A 91 KKL-DHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVP-TLKPLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNL 168 (298)
T ss_dssp HTC-CCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSS-CSSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGE
T ss_pred HhC-CCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHh-hcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHE
Confidence 999 79999999999986 67899999999999998754 345789999999999999999999999999999999999
Q ss_pred eeeecCCCCCEEEeecCCccccCCCc-ceecccccccccchhhhhhh----cCCccchHhHHHHHHHHhhCCCCCCCCCh
Q 042823 156 SFISRDDNALLKVTDFGSALLFEEGQ-VYRDIVGSGFYIAPEVLRRR----YGKEIDIWSAGVILYILLSGVPPFWAETK 230 (477)
Q Consensus 156 l~~~~~~~~~~kl~Dfg~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~----~~~~~DiwslG~il~~l~tg~~pf~~~~~ 230 (477)
++ +.++.+||+|||++....... ......||+.|+|||++.+. ++.++|||||||++|+|++|..||.....
T Consensus 169 l~---~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~ 245 (298)
T 2zv2_A 169 LV---GEDGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERI 245 (298)
T ss_dssp EE---CTTSCEEECCCTTCEECSSSSCEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred EE---CCCCCEEEecCCCccccccccccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCccH
Confidence 99 778899999999998765432 33456899999999998653 47789999999999999999999988877
Q ss_pred hhHHHHHHcCCccCCCCCCCCCCHHHHHHHHHhcccCccccCCHHHHhcCcccC
Q 042823 231 KGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLR 284 (477)
Q Consensus 231 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~ 284 (477)
......+......++. .+.+++.+.+||.+||+.||++|||+.++++||||+
T Consensus 246 ~~~~~~~~~~~~~~~~--~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~hp~~~ 297 (298)
T 2zv2_A 246 MCLHSKIKSQALEFPD--QPDIAEDLKDLITRMLDKNPESRIVVPEIKLHPWVT 297 (298)
T ss_dssp HHHHHHHHHCCCCCCS--SSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTCHHHH
T ss_pred HHHHHHHhcccCCCCC--ccccCHHHHHHHHHHhhcChhhCCCHHHHhcCcccc
Confidence 7777777666554432 357899999999999999999999999999999985
|
| >3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-50 Score=398.70 Aligned_cols=268 Identities=19% Similarity=0.300 Sum_probs=221.0
Q ss_pred ccccccccccccccccccc--CCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEE
Q 042823 16 KAYEDVMLHYFFGRMLGRG--QFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTY 93 (477)
Q Consensus 16 ~~~~~~~~~Y~~~~~iG~G--~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~ 93 (477)
.+...-.++|++++.||+| +||.||+|.++.+++.||+|++..... .......+.+|+.+++.+ +|||||++++++
T Consensus 18 s~~~~~~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~ 95 (389)
T 3gni_B 18 SSFLPEGGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEAC-SNEMVTFLQGELHVSKLF-NHPNIVPYRATF 95 (389)
T ss_dssp CCCCCCGGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGS-CHHHHHHHHHHHHHHHHC-CCTTBCCEEEEE
T ss_pred hcccCCCCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEeccccc-ChHHHHHHHHHHHHHHhC-CCCCCCcEeEEE
Confidence 3444556789999999999 999999999999999999999976533 334567788999999999 799999999999
Q ss_pred EeCCeEEEEEeccCCCchHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeec
Q 042823 94 EDETAVHVVMELCEGGDLFDRIIAK--GYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDF 171 (477)
Q Consensus 94 ~~~~~~~lv~e~~~gg~L~~~l~~~--~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Df 171 (477)
.+.+.+|+|||||+||+|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+||
T Consensus 96 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~NIll---~~~~~~kl~df 172 (389)
T 3gni_B 96 IADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMGYVHRSVKASHILI---SVDGKVYLSGL 172 (389)
T ss_dssp EETTEEEEEEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE---CTTCCEEECCG
T ss_pred EECCEEEEEEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE---cCCCCEEEccc
Confidence 9999999999999999999999876 679999999999999999999999999999999999999 77889999999
Q ss_pred CCccccCCC--------cceecccccccccchhhhhh---hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcC
Q 042823 172 GSALLFEEG--------QVYRDIVGSGFYIAPEVLRR---RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQG 240 (477)
Q Consensus 172 g~a~~~~~~--------~~~~~~~gt~~y~aPE~~~~---~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~ 240 (477)
|.+...... ......+||+.|+|||++.+ .++.++|||||||++|+|++|.+||.+.........+..+
T Consensus 173 g~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~ 252 (389)
T 3gni_B 173 RSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNG 252 (389)
T ss_dssp GGCEECEETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHHHC---
T ss_pred ccceeeccccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcC
Confidence 987644221 11123478999999999875 5899999999999999999999999887666555444332
Q ss_pred CccC------------------------------------------CCCCCCCCCHHHHHHHHHhcccCccccCCHHHHh
Q 042823 241 EIDF------------------------------------------DTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVL 278 (477)
Q Consensus 241 ~~~~------------------------------------------~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l 278 (477)
.... ..+.+..+++.+.+||.+||+.||++|||+.++|
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell 332 (389)
T 3gni_B 253 TVPCLLDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLL 332 (389)
T ss_dssp -----------------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHT
T ss_pred CCCccccccccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHh
Confidence 2110 0012345789999999999999999999999999
Q ss_pred cCcccCcCCC
Q 042823 279 EHPWLRESGE 288 (477)
Q Consensus 279 ~h~~~~~~~~ 288 (477)
+||||+....
T Consensus 333 ~hp~f~~~~~ 342 (389)
T 3gni_B 333 NHSFFKQIKR 342 (389)
T ss_dssp TSGGGGGC--
T ss_pred cCHHHHHHhh
Confidence 9999987543
|
| >3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-51 Score=398.78 Aligned_cols=271 Identities=31% Similarity=0.577 Sum_probs=229.3
Q ss_pred ccccccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCc--cchhhHHHHHHHHHHHHhccCCCCeeEEEEE
Q 042823 15 GKAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPK--MRLAENDMIRREIQIRLYLSGQPNVVEFKST 92 (477)
Q Consensus 15 ~~~~~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~ 92 (477)
+.....+.++|++.+.||+|+||+||+|.+..+++.||+|++.+... ........+.+|+.++..+ +||||++++++
T Consensus 18 ~~~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~ 96 (345)
T 3hko_A 18 GGSLLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKL-HHPNIARLYEV 96 (345)
T ss_dssp CBCHHHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHC-CCTTBCCEEEE
T ss_pred CchhhhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhC-CCCCcceeehh
Confidence 45666888999999999999999999999999999999999875421 1234457788999999999 69999999999
Q ss_pred EEeCCeEEEEEeccCCCchHHHHHH----------------------------------------cCCCCHHHHHHHHHH
Q 042823 93 YEDETAVHVVMELCEGGDLFDRIIA----------------------------------------KGYNSERDAATVLRA 132 (477)
Q Consensus 93 ~~~~~~~~lv~e~~~gg~L~~~l~~----------------------------------------~~~~~~~~~~~i~~q 132 (477)
+.+.+..|+|||||+||+|.+++.. ...+++..++.++.|
T Consensus 97 ~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~q 176 (345)
T 3hko_A 97 YEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQ 176 (345)
T ss_dssp EECSSEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHH
T ss_pred hccCCeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHH
Confidence 9999999999999999999998842 112367788899999
Q ss_pred HHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCCCc-----ceecccccccccchhhhh---hhcCC
Q 042823 133 IVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQ-----VYRDIVGSGFYIAPEVLR---RRYGK 204 (477)
Q Consensus 133 il~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~~~gt~~y~aPE~~~---~~~~~ 204 (477)
|+.||.|||++||+||||||+||++.. +....+||+|||++....... ......||+.|+|||++. ..++.
T Consensus 177 i~~~l~~LH~~~ivH~Dlkp~NIll~~-~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~ 255 (345)
T 3hko_A 177 IFSALHYLHNQGICHRDIKPENFLFST-NKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGP 255 (345)
T ss_dssp HHHHHHHHHHTTEECCCCCGGGEEESC-SSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCT
T ss_pred HHHHHHHHHHCCccccCCChhhEEEec-CCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCc
Confidence 999999999999999999999999832 222389999999997653211 134567999999999986 45889
Q ss_pred ccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCCCCHHHHHHHHHhcccCccccCCHHHHhcCcccC
Q 042823 205 EIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLR 284 (477)
Q Consensus 205 ~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~ 284 (477)
++|||||||++|+|++|..||.+.........+......++.+.++.+++.+.+||.+||+.||.+|||+.++|+||||+
T Consensus 256 ~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~hp~~~ 335 (345)
T 3hko_A 256 KCDAWSAGVLLHLLLMGAVPFPGVNDADTISQVLNKKLCFENPNYNVLSPLARDLLSNLLNRNVDERFDAMRALQHPWIS 335 (345)
T ss_dssp HHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCTTSGGGGGSCHHHHHHHHHHSCSCTTTSCCHHHHHHSHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHhcccccCCcccccCCHHHHHHHHHHcCCChhHCCCHHHHhcChhhc
Confidence 99999999999999999999999988888888888877776666667899999999999999999999999999999998
Q ss_pred cCC
Q 042823 285 ESG 287 (477)
Q Consensus 285 ~~~ 287 (477)
...
T Consensus 336 ~~~ 338 (345)
T 3hko_A 336 QFS 338 (345)
T ss_dssp TTS
T ss_pred cCh
Confidence 754
|
| >3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.9e-51 Score=410.88 Aligned_cols=261 Identities=24% Similarity=0.390 Sum_probs=211.9
Q ss_pred cccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeC-
Q 042823 18 YEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDE- 96 (477)
Q Consensus 18 ~~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~- 96 (477)
...+.++|++++.||+|+||+||+|.+..+++.||+|++.+. .........+.+|+.+++.+ +||||+++++++...
T Consensus 57 ~~~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~-~~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~~ 134 (464)
T 3ttj_A 57 TFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRP-FQNQTHAKRAYRELVLMKCV-NHKNIISLLNVFTPQK 134 (464)
T ss_dssp EEEEETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESG-GGSHHHHHHHHHHHHHHHHC-CCTTBCCCSEEECSCC
T ss_pred ceeecCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECcc-ccChHHHHHHHHHHHHHHhC-CCCCCCcEEEEEccCC
Confidence 346678999999999999999999999999999999999754 22344567788999999999 799999999999654
Q ss_pred -----CeEEEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeec
Q 042823 97 -----TAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDF 171 (477)
Q Consensus 97 -----~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Df 171 (477)
..+|+||||+++ +|.+.+. ..+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+||
T Consensus 135 ~~~~~~~~~lv~E~~~~-~l~~~~~--~~l~~~~~~~~~~qil~aL~~lH~~~iiHrDlkp~NIll---~~~~~~kl~DF 208 (464)
T 3ttj_A 135 TLEEFQDVYLVMELMDA-NLCQVIQ--MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV---KSDCTLKILDF 208 (464)
T ss_dssp STTTCCEEEEEEECCSE-EHHHHHT--SCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE---CTTSCEEECCC
T ss_pred ccccCCeEEEEEeCCCC-CHHHHHh--hcCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChHhEEE---eCCCCEEEEEE
Confidence 467999999976 5666664 348999999999999999999999999999999999999 77889999999
Q ss_pred CCccccCCCcceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCcc-------
Q 042823 172 GSALLFEEGQVYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEID------- 243 (477)
Q Consensus 172 g~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~------- 243 (477)
|+|............+||+.|+|||++.+ .|+.++|||||||++|+|++|.+||.+.+....+..+......
T Consensus 209 G~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~~~~i~~~lg~p~~~~~~ 288 (464)
T 3ttj_A 209 GLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMK 288 (464)
T ss_dssp CCC-----CCCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHT
T ss_pred EeeeecCCCcccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHH
Confidence 99987766555566789999999999875 6899999999999999999999999988877666665432110
Q ss_pred ---------------CCCCCC----CC------------CCHHHHHHHHHhcccCccccCCHHHHhcCcccCcC
Q 042823 244 ---------------FDTDPW----PS------------ISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRES 286 (477)
Q Consensus 244 ---------------~~~~~~----~~------------~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~ 286 (477)
+....+ +. .++++++||.+||+.||++|||+.|+|+||||+..
T Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~~~~~ 362 (464)
T 3ttj_A 289 KLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVW 362 (464)
T ss_dssp TSCHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTSTTTGGG
T ss_pred HcchhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcChhhhhc
Confidence 000000 00 15679999999999999999999999999999753
|
| >3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-50 Score=387.15 Aligned_cols=260 Identities=23% Similarity=0.312 Sum_probs=214.9
Q ss_pred cccccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEe
Q 042823 16 KAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYED 95 (477)
Q Consensus 16 ~~~~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~ 95 (477)
.....+.++|++.+.||+|+||+||+|.++.+++.||||++..... ..........|+..+..+..||||+++++++.+
T Consensus 50 ~~~~~~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~ 128 (311)
T 3p1a_A 50 RPESFFQQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFR-GPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEE 128 (311)
T ss_dssp SSSCHHHHHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCC-SHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEE
T ss_pred CccchhhhheeeeheeccCCCeEEEEEEECCCCeEEEEEEeccccc-ChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEe
Confidence 3445566889999999999999999999999999999998765433 223344555666666666689999999999999
Q ss_pred CCeEEEEEeccCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCc
Q 042823 96 ETAVHVVMELCEGGDLFDRIIAK-GYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSA 174 (477)
Q Consensus 96 ~~~~~lv~e~~~gg~L~~~l~~~-~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a 174 (477)
.+.+|+||||| +++|.+++... ..+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++
T Consensus 129 ~~~~~lv~e~~-~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll---~~~~~~kl~DFG~a 204 (311)
T 3p1a_A 129 GGILYLQTELC-GPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQGLVHLDVKPANIFL---GPRGRCKLGDFGLL 204 (311)
T ss_dssp TTEEEEEEECC-CCBHHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE---CGGGCEEECCCTTC
T ss_pred CCEEEEEEecc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEE---CCCCCEEEccceee
Confidence 99999999999 66998888765 459999999999999999999999999999999999999 77789999999999
Q ss_pred cccCCCcceecccccccccchhhhhhhcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCCCCH
Q 042823 175 LLFEEGQVYRDIVGSGFYIAPEVLRRRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISS 254 (477)
Q Consensus 175 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 254 (477)
.............||+.|+|||++.+.++.++|||||||++|+|++|..|+... .....+..+.. +....+.+++
T Consensus 205 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~el~~g~~~~~~~---~~~~~~~~~~~--~~~~~~~~~~ 279 (311)
T 3p1a_A 205 VELGTAGAGEVQEGDPRYMAPELLQGSYGTAADVFSLGLTILEVACNMELPHGG---EGWQQLRQGYL--PPEFTAGLSS 279 (311)
T ss_dssp EECC------CCCCCGGGCCGGGGGTCCSTHHHHHHHHHHHHHHHHTCCCCSSH---HHHHHHTTTCC--CHHHHTTSCH
T ss_pred eecccCCCCcccCCCccccCHhHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCc---cHHHHHhccCC--CcccccCCCH
Confidence 877655555566799999999999999999999999999999999997776543 23334443322 1122346899
Q ss_pred HHHHHHHHhcccCccccCCHHHHhcCcccCc
Q 042823 255 TAKDLVRRMLTKDPKRRITAAQVLEHPWLRE 285 (477)
Q Consensus 255 ~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~ 285 (477)
++.+||.+||+.||++|||+.++|+||||++
T Consensus 280 ~l~~li~~~L~~dP~~Rpt~~ell~hp~~~~ 310 (311)
T 3p1a_A 280 ELRSVLVMMLEPDPKLRATAEALLALPVLRQ 310 (311)
T ss_dssp HHHHHHHHHSCSSTTTSCCHHHHHTSGGGSC
T ss_pred HHHHHHHHHcCCChhhCcCHHHHHhCccccC
Confidence 9999999999999999999999999999975
|
| >1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.7e-50 Score=389.33 Aligned_cols=262 Identities=26% Similarity=0.400 Sum_probs=225.8
Q ss_pred ccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCe
Q 042823 19 EDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETA 98 (477)
Q Consensus 19 ~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~ 98 (477)
+...++|.+.+.||+|+||.||+|.+..+++.||+|++.............+.+|+.++..+ +||||+++++++..+..
T Consensus 50 ~~~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~ 128 (348)
T 1u5q_A 50 DDPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKL-RHPNTIQYRGCYLREHT 128 (348)
T ss_dssp SCHHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHC-CCTTBCCEEEEEEETTE
T ss_pred cchhhheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhC-CCCCEeeEEEEEEECCe
Confidence 34557799999999999999999999999999999999765444444556788999999999 79999999999999999
Q ss_pred EEEEEeccCCCchHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCcccc
Q 042823 99 VHVVMELCEGGDLFDRIIA-KGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLF 177 (477)
Q Consensus 99 ~~lv~e~~~gg~L~~~l~~-~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~ 177 (477)
.|+|||||. |+|.+++.. ...+++..+..++.|++.||.|||++||+||||||+||++ +.++.+||+|||++...
T Consensus 129 ~~lv~e~~~-g~l~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll---~~~~~~kL~DfG~a~~~ 204 (348)
T 1u5q_A 129 AWLVMEYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILL---SEPGLVKLGDFGSASIM 204 (348)
T ss_dssp EEEEEECCS-EEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEE---ETTTEEEECCCTTCBSS
T ss_pred EEEEEecCC-CCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEE---CCCCCEEEeeccCceec
Confidence 999999997 488888754 5679999999999999999999999999999999999999 67789999999999876
Q ss_pred CCCcceecccccccccchhhhh----hhcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCCCC
Q 042823 178 EEGQVYRDIVGSGFYIAPEVLR----RRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSIS 253 (477)
Q Consensus 178 ~~~~~~~~~~gt~~y~aPE~~~----~~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 253 (477)
... ....||+.|+|||++. +.++.++|||||||++|+|++|.+||...+.......+..+..... ....+|
T Consensus 205 ~~~---~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 279 (348)
T 1u5q_A 205 APA---NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPAL--QSGHWS 279 (348)
T ss_dssp SSB---CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCC--CCTTSC
T ss_pred CCC---CcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCC--CCCCCC
Confidence 432 3457999999999984 4689999999999999999999999988877776666666543222 224679
Q ss_pred HHHHHHHHHhcccCccccCCHHHHhcCcccCcCCCCC
Q 042823 254 STAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEAS 290 (477)
Q Consensus 254 ~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~~~~~ 290 (477)
+.+.+||.+||+.||++|||+.++++|||+.......
T Consensus 280 ~~l~~li~~~l~~dP~~Rps~~~ll~h~~~~~~~~~~ 316 (348)
T 1u5q_A 280 EYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRERPPT 316 (348)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHTTCHHHHSCCCTT
T ss_pred HHHHHHHHHHcccChhhCcCHHHHhhChhhhccCCcc
Confidence 9999999999999999999999999999997765443
|
| >2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-50 Score=391.95 Aligned_cols=265 Identities=35% Similarity=0.630 Sum_probs=222.7
Q ss_pred ccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCcc-----chhhHHHHHHHHHHHHhccCCCCeeEEEEEE
Q 042823 19 EDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKM-----RLAENDMIRREIQIRLYLSGQPNVVEFKSTY 93 (477)
Q Consensus 19 ~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~-----~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~ 93 (477)
..+.++|.+.+.||+|+||.||+|.++.+++.||+|++...... .......+.+|+.++..+ +||||+++++++
T Consensus 6 ~~l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~ 84 (322)
T 2ycf_A 6 KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKL-NHPCIIKIKNFF 84 (322)
T ss_dssp HHHHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHC-CCTTBCCEEEEE
T ss_pred hhhhhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhC-CCCCCceEeeEE
Confidence 45678999999999999999999999999999999998654321 112234578899999999 799999999999
Q ss_pred EeCCeEEEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCC
Q 042823 94 EDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGS 173 (477)
Q Consensus 94 ~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~ 173 (477)
..+. +|+||||++||+|.+++...+.+++..++.++.||+.||.|||++||+||||||+||++...+....+||+|||+
T Consensus 85 ~~~~-~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~ 163 (322)
T 2ycf_A 85 DAED-YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGH 163 (322)
T ss_dssp ESSS-EEEEEECCTTEETHHHHSTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSSSCCEEECCCTT
T ss_pred cCCc-eEEEEecCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEecCCCCCeEEEccCcc
Confidence 7665 899999999999999998888999999999999999999999999999999999999995444455699999999
Q ss_pred ccccCCCcceecccccccccchhhhh----hhcCCccchHhHHHHHHHHhhCCCCCCCCChh-hHHHHHHcCCccCCCCC
Q 042823 174 ALLFEEGQVYRDIVGSGFYIAPEVLR----RRYGKEIDIWSAGVILYILLSGVPPFWAETKK-GTYDAILQGEIDFDTDP 248 (477)
Q Consensus 174 a~~~~~~~~~~~~~gt~~y~aPE~~~----~~~~~~~DiwslG~il~~l~tg~~pf~~~~~~-~~~~~i~~~~~~~~~~~ 248 (477)
+.............||+.|+|||++. ..++.++|||||||++|+|++|..||...... .....+..+...+.+..
T Consensus 164 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 243 (322)
T 2ycf_A 164 SKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEV 243 (322)
T ss_dssp CEECCCCHHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSSCHHHHHHHTCCCCCHHH
T ss_pred ceecccccccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHHHHHHHHHhCccccCchh
Confidence 98776554445567999999999974 45889999999999999999999999765443 44455556555544444
Q ss_pred CCCCCHHHHHHHHHhcccCccccCCHHHHhcCcccCc
Q 042823 249 WPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRE 285 (477)
Q Consensus 249 ~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~ 285 (477)
++.+++.+.+||.+||+.||++|||+.++|+||||+.
T Consensus 244 ~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~h~~~~~ 280 (322)
T 2ycf_A 244 WAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQD 280 (322)
T ss_dssp HTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGCC
T ss_pred hhhcCHHHHHHHHHHcccCHhhCCCHHHHhhCcCcCC
Confidence 5678999999999999999999999999999999975
|
| >3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-50 Score=424.79 Aligned_cols=259 Identities=27% Similarity=0.471 Sum_probs=231.8
Q ss_pred ccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEE
Q 042823 21 VMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVH 100 (477)
Q Consensus 21 ~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~ 100 (477)
-.++|.+++.||+|+||.||+|.++.+++.||+|++.+...........+..|..++..+.+||+|+++++++++...+|
T Consensus 339 ~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~ 418 (674)
T 3pfq_A 339 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY 418 (674)
T ss_dssp -CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEE
T ss_pred cccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEE
Confidence 35689999999999999999999999999999999976432222344567788999888878999999999999999999
Q ss_pred EEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccC-C
Q 042823 101 VVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFE-E 179 (477)
Q Consensus 101 lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~-~ 179 (477)
+||||++||+|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+|.... .
T Consensus 419 lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~gIiHrDLKp~NILl---~~~g~ikL~DFGla~~~~~~ 495 (674)
T 3pfq_A 419 FVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVML---DSEGHIKIADFGMCKENIWD 495 (674)
T ss_dssp EEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTSEECCCCCSTTEEE---CSSSCEEECCCTTCEECCCT
T ss_pred EEEeCcCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeccCChhhEEE---cCCCcEEEeecceeeccccC
Confidence 999999999999999998999999999999999999999999999999999999999 788899999999998642 3
Q ss_pred Ccceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCCCCHHHHH
Q 042823 180 GQVYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKD 258 (477)
Q Consensus 180 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 258 (477)
.......+||+.|+|||++.+ .|+.++|||||||++|+|++|.+||.+.+..+.+..+......++ +.+|+++++
T Consensus 496 ~~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~p----~~~s~~~~~ 571 (674)
T 3pfq_A 496 GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYP----KSMSKEAVA 571 (674)
T ss_dssp TCCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHSSCCCCC----TTSCHHHHH
T ss_pred CcccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCHHHHHHHHHhCCCCCC----ccCCHHHHH
Confidence 334456789999999999874 699999999999999999999999999999999999998877665 368999999
Q ss_pred HHHHhcccCccccCCH-----HHHhcCcccCcC
Q 042823 259 LVRRMLTKDPKRRITA-----AQVLEHPWLRES 286 (477)
Q Consensus 259 li~~~l~~dp~~R~s~-----~~~l~h~~~~~~ 286 (477)
||++||++||.+||++ .++++||||+..
T Consensus 572 li~~lL~~dP~~R~~~~~~~~~ei~~h~ff~~i 604 (674)
T 3pfq_A 572 ICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYI 604 (674)
T ss_dssp HHHHHSCSSSTTCTTCSTTHHHHHHSSGGGSSC
T ss_pred HHHHHccCCHHHCCCCCCCcHHHHhcCccccCC
Confidence 9999999999999997 999999999864
|
| >3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-50 Score=408.69 Aligned_cols=264 Identities=28% Similarity=0.397 Sum_probs=202.9
Q ss_pred cccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEe--
Q 042823 18 YEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYED-- 95 (477)
Q Consensus 18 ~~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~-- 95 (477)
...+.++|++++.||+|+||+||+|.++.+++.||+|++.+. .........+.+|+.++..+ +||||+++++++..
T Consensus 48 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~-~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~ 125 (458)
T 3rp9_A 48 DWQIPDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRV-FEDLIDCKRILREIAILNRL-NHDHVVKVLDIVIPKD 125 (458)
T ss_dssp SCCSCTTEEECCC-------CEEEEEECC--CEEEEEEECST-TSSHHHHHHHHHHHHHHHHC-CCTTBCCEEEECCCSC
T ss_pred cCccCCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechh-hcCHHHHHHHHHHHHHHHhC-CCCCCCceEEEEecCC
Confidence 345678999999999999999999999999999999998653 23344567788999999999 79999999999943
Q ss_pred ---CCeEEEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecC
Q 042823 96 ---ETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFG 172 (477)
Q Consensus 96 ---~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg 172 (477)
...+|+||||+. |+|.+++.....+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||
T Consensus 126 ~~~~~~~~lv~e~~~-~~L~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiHrDlKp~NILl---~~~~~~kl~DFG 201 (458)
T 3rp9_A 126 VEKFDELYVVLEIAD-SDFKKLFRTPVYLTELHIKTLLYNLLVGVKYVHSAGILHRDLKPANCLV---NQDCSVKVCDFG 201 (458)
T ss_dssp TTTCCCEEEEECCCS-EEHHHHHHSSCCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEE---CTTCCEEECCCT
T ss_pred cccCceEEEEEeccc-cchhhhcccCCCCCHHHHHHHHHHHHHHHHHHHhCCcCCCCCChhhEEE---CCCCCEeecccc
Confidence 357999999985 6999999988889999999999999999999999999999999999999 788899999999
Q ss_pred CccccCCCc----------------------------ceecccccccccchhhhh--hhcCCccchHhHHHHHHHHhh--
Q 042823 173 SALLFEEGQ----------------------------VYRDIVGSGFYIAPEVLR--RRYGKEIDIWSAGVILYILLS-- 220 (477)
Q Consensus 173 ~a~~~~~~~----------------------------~~~~~~gt~~y~aPE~~~--~~~~~~~DiwslG~il~~l~t-- 220 (477)
+|....... .....+||++|+|||++. ..|+.++||||||||+|+|++
T Consensus 202 la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg~ 281 (458)
T 3rp9_A 202 LARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMI 281 (458)
T ss_dssp TCBCTTSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTTS
T ss_pred cchhccCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHhc
Confidence 998654221 234568899999999863 459999999999999999999
Q ss_pred ---------CCCCCCCCCh--------------------hhHHHHHHc-----------------------CCcc----C
Q 042823 221 ---------GVPPFWAETK--------------------KGTYDAILQ-----------------------GEID----F 244 (477)
Q Consensus 221 ---------g~~pf~~~~~--------------------~~~~~~i~~-----------------------~~~~----~ 244 (477)
|.+||.+... ...+..+.. .... .
T Consensus 282 ~~~~~~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (458)
T 3rp9_A 282 KENVAYHADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEALEKEDAKRYIRIFPKREGTD 361 (458)
T ss_dssp TTTCSSGGGCCCSCC--------------------CHHHHHHHHHHHHHHCCCCHHHHHTSSCHHHHHHHTTSCCCCCCC
T ss_pred cccccccccccccCCCCccccccccccccccccccccCCHHHHHHHHHHcCCCCHHHHhhcCCHHHHHHHHhcCCCCCCC
Confidence 7777766431 111111111 0000 0
Q ss_pred CCCCCCCCCHHHHHHHHHhcccCccccCCHHHHhcCcccCcCC
Q 042823 245 DTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESG 287 (477)
Q Consensus 245 ~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~~ 287 (477)
....++.+++++.+||.+||++||.+|||+.++|+||||+...
T Consensus 362 ~~~~~~~~s~~~~dLl~~mL~~dP~~R~t~~e~L~Hp~f~~~~ 404 (458)
T 3rp9_A 362 LAERFPASSADAIHLLKRMLVFNPNKRITINECLAHPFFKEVR 404 (458)
T ss_dssp GGGGSTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTTC
T ss_pred HHHHCCCCCHHHHHHHHHHhccCccccCCHHHHhcCHhhhhcC
Confidence 0112466799999999999999999999999999999998753
|
| >3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-49 Score=389.92 Aligned_cols=269 Identities=26% Similarity=0.403 Sum_probs=224.4
Q ss_pred ccccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEe-
Q 042823 17 AYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYED- 95 (477)
Q Consensus 17 ~~~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~- 95 (477)
+.....++|++++.||+|+||.||+|.++.+|+.||+|++....... .....+.+|+.++..+ +||||+++++++..
T Consensus 11 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~ 88 (351)
T 3mi9_A 11 PFCDEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKE-GFPITALREIKILQLL-KHENVVNLIEICRTK 88 (351)
T ss_dssp TTSCBGGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSS-SSCHHHHHHHHHHHHC-CCTTBCCEEEEEEEC
T ss_pred cccccccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccc-cchHHHHHHHHHHHhc-cCCCcccHhheeecc
Confidence 34455689999999999999999999999999999999986553322 2334567899999999 69999999999987
Q ss_pred -------CCeEEEEEeccCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEE
Q 042823 96 -------ETAVHVVMELCEGGDLFDRIIAK-GYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLK 167 (477)
Q Consensus 96 -------~~~~~lv~e~~~gg~L~~~l~~~-~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~k 167 (477)
.+.+|+|||||+| +|.+.+... ..+++.+++.++.||+.||.|||++||+||||||+||++ +.++.+|
T Consensus 89 ~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~---~~~~~~k 164 (351)
T 3mi9_A 89 ASPYNRCKGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLI---TRDGVLK 164 (351)
T ss_dssp --------CEEEEEEECCSE-EHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE---CTTSCEE
T ss_pred ccccccCCceEEEEEeccCC-CHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEE---cCCCCEE
Confidence 4578999999986 777777654 579999999999999999999999999999999999999 7788999
Q ss_pred EeecCCccccCC-----Ccceecccccccccchhhhhh--hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcC
Q 042823 168 VTDFGSALLFEE-----GQVYRDIVGSGFYIAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQG 240 (477)
Q Consensus 168 l~Dfg~a~~~~~-----~~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~ 240 (477)
|+|||++..... ........||+.|+|||++.+ .++.++|||||||++|+|++|.+||.+.........+...
T Consensus 165 l~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~ 244 (351)
T 3mi9_A 165 LADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQL 244 (351)
T ss_dssp ECCCTTCEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHH
T ss_pred EccchhcccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHH
Confidence 999999976542 222345678999999999864 4799999999999999999999999998887777776654
Q ss_pred CccCCCCCCCCC----------------------------CHHHHHHHHHhcccCccccCCHHHHhcCcccCcCCCCCC
Q 042823 241 EIDFDTDPWPSI----------------------------SSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASD 291 (477)
Q Consensus 241 ~~~~~~~~~~~~----------------------------~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~~~~~~ 291 (477)
....+...|+.. ++.+.+||.+||+.||.+|||+.++|+||||........
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~~~~~ 323 (351)
T 3mi9_A 245 CGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFFWSDPMPSD 323 (351)
T ss_dssp HCCCCTTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGSSSCCCC
T ss_pred hCCCChhhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhCCCCcCCCCCccc
Confidence 444444444332 778999999999999999999999999999987655443
|
| >1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-50 Score=393.65 Aligned_cols=266 Identities=24% Similarity=0.365 Sum_probs=219.2
Q ss_pred ccccccccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEE
Q 042823 13 ILGKAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKST 92 (477)
Q Consensus 13 ~~~~~~~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~ 92 (477)
.+......+.++|++.+.||+|+||.||+|.++.+|+.||+|++.... ........+.+|+.++..+ +||||++++++
T Consensus 15 ~~~~~~~~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~ 92 (367)
T 1cm8_A 15 EVTKTAWEVRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPF-QSELFAKRAYRELRLLKHM-RHENVIGLLDV 92 (367)
T ss_dssp ECSSSEECCBSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTT-SSHHHHHHHHHHHHHHHHC-CBTTBCCCSEE
T ss_pred EecCceeeecceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccc-cCHHHHHHHHHHHHHHHhC-CCcCCCCceee
Confidence 345566778899999999999999999999999999999999986532 2334566788999999999 69999999999
Q ss_pred EEeCC------eEEEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCE
Q 042823 93 YEDET------AVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALL 166 (477)
Q Consensus 93 ~~~~~------~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~ 166 (477)
+.... .+|+||||+ |++|.+++.. +.+++..+..++.||+.||.|||++||+||||||+||++ +.++.+
T Consensus 93 ~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~-~~l~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~NIll---~~~~~~ 167 (367)
T 1cm8_A 93 FTPDETLDDFTDFYLVMPFM-GTDLGKLMKH-EKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAV---NEDCEL 167 (367)
T ss_dssp ECSCSSTTTCCCCEEEEECC-SEEHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE---CTTCCE
T ss_pred EecCCccccCceEEEEEecC-CCCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCccccCcCHHHEEE---cCCCCE
Confidence 97653 469999999 7899888876 568999999999999999999999999999999999999 778899
Q ss_pred EEeecCCccccCCCcceecccccccccchhhhhh--hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCcc-
Q 042823 167 KVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEID- 243 (477)
Q Consensus 167 kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~- 243 (477)
||+|||++...... ....+||+.|+|||++.+ .++.++||||+||++|+|++|.+||.+.+....+..+......
T Consensus 168 kl~Dfg~a~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~~ 245 (367)
T 1cm8_A 168 KILDFGLARQADSE--MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTP 245 (367)
T ss_dssp EECCCTTCEECCSS--CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCC
T ss_pred EEEeeecccccccc--cCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCC
Confidence 99999999875432 345689999999999865 5899999999999999999999999988776666555431110
Q ss_pred ----------------------CCC----CCCCCCCHHHHHHHHHhcccCccccCCHHHHhcCcccCcCC
Q 042823 244 ----------------------FDT----DPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESG 287 (477)
Q Consensus 244 ----------------------~~~----~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~~ 287 (477)
... ..++.+++.+.+||.+||+.||.+|||+.++|+||||....
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~hp~f~~~~ 315 (367)
T 1cm8_A 246 PAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESLH 315 (367)
T ss_dssp CHHHHHTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTTC
T ss_pred CHHHHHHhhhHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhcChHHHhhc
Confidence 001 12356799999999999999999999999999999998653
|
| >2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-50 Score=378.66 Aligned_cols=262 Identities=34% Similarity=0.559 Sum_probs=220.1
Q ss_pred cccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCC
Q 042823 18 YEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDET 97 (477)
Q Consensus 18 ~~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~ 97 (477)
.....++|++.+.||+|+||.||+|.++.+++.||+|++.............+.+|+.++..+ +||||+++++++....
T Consensus 6 g~~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~ 84 (276)
T 2h6d_A 6 GRVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLF-RHPHIIKLYQVISTPT 84 (276)
T ss_dssp -CCEETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTC-CCTTBCCEEEEEECSS
T ss_pred CcceeccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcC-CCCCEeEEEEEEecCC
Confidence 445567999999999999999999999999999999998654322223456788999999999 7999999999999999
Q ss_pred eEEEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCcccc
Q 042823 98 AVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLF 177 (477)
Q Consensus 98 ~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~ 177 (477)
.+|+||||++|++|.+++...+.+++..+..++.||+.||.|||++|++||||||+||++ +.++.+||+|||++...
T Consensus 85 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~---~~~~~~~l~dfg~~~~~ 161 (276)
T 2h6d_A 85 DFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLL---DAHMNAKIADFGLSNMM 161 (276)
T ss_dssp EEEEEEECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHHCSSCCCCCGGGEEE---CTTSCEEECCCCGGGCC
T ss_pred eEEEEEeccCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChhhEEE---CCCCCEEEeeccccccc
Confidence 999999999999999999988889999999999999999999999999999999999999 77889999999999877
Q ss_pred CCCcceecccccccccchhhhhhh-c-CCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCCCCHH
Q 042823 178 EEGQVYRDIVGSGFYIAPEVLRRR-Y-GKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISST 255 (477)
Q Consensus 178 ~~~~~~~~~~gt~~y~aPE~~~~~-~-~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 255 (477)
..........||+.|+|||++.+. + +.++||||||+++|+|++|..||...........+..+....+ ..+++.
T Consensus 162 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~----~~~~~~ 237 (276)
T 2h6d_A 162 SDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIP----EYLNRS 237 (276)
T ss_dssp CC-------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCC----TTSCHH
T ss_pred CCCcceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHHhhcCcccCc----hhcCHH
Confidence 655545566899999999998764 3 5799999999999999999999988877777777776654432 357899
Q ss_pred HHHHHHHhcccCccccCCHHHHhcCcccCcCC
Q 042823 256 AKDLVRRMLTKDPKRRITAAQVLEHPWLRESG 287 (477)
Q Consensus 256 ~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~~ 287 (477)
+.++|.+||+.||.+|||+.++++||||++..
T Consensus 238 l~~li~~~l~~~p~~Rps~~~~l~h~~~~~~~ 269 (276)
T 2h6d_A 238 VATLLMHMLQVDPLKRATIKDIREHEWFKQDL 269 (276)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHSHHHHTTC
T ss_pred HHHHHHHHccCChhhCCCHHHHHhChhhccCc
Confidence 99999999999999999999999999997653
|
| >2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=8.8e-50 Score=378.80 Aligned_cols=258 Identities=30% Similarity=0.579 Sum_probs=227.4
Q ss_pred ccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEE
Q 042823 21 VMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVH 100 (477)
Q Consensus 21 ~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~ 100 (477)
..++|.+.+.||+|+||.||+|.+..+++.||+|++.............+.+|+.++..+ +||||+++++++.+.+.+|
T Consensus 12 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~ 90 (284)
T 2vgo_A 12 TIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHL-RHPNILRMYNYFHDRKRIY 90 (284)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTC-CCTTBCCEEEEEECSSEEE
T ss_pred hhhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcC-CCCCEeeEEEEEEcCCEEE
Confidence 446899999999999999999999999999999998654322222346788999999999 7999999999999999999
Q ss_pred EEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCCC
Q 042823 101 VVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEG 180 (477)
Q Consensus 101 lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~ 180 (477)
+||||+++|+|.+++...+.+++..+..++.|++.||.|||++||+||||||+||++ +.++.+||+|||++......
T Consensus 91 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~---~~~~~~kl~Dfg~~~~~~~~ 167 (284)
T 2vgo_A 91 LMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERKVIHRDIKPENLLM---GYKGELKIADFGWSVHAPSL 167 (284)
T ss_dssp EEECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEE---CTTCCEEECCCTTCEECSSS
T ss_pred EEEEeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEE---cCCCCEEEecccccccCccc
Confidence 999999999999999998889999999999999999999999999999999999999 77789999999998765432
Q ss_pred cceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCCCCHHHHHH
Q 042823 181 QVYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDL 259 (477)
Q Consensus 181 ~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l 259 (477)
......||+.|+|||++.+ .++.++||||||+++|+|++|..||...........+......++ +.+++.++++
T Consensus 168 -~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~l 242 (284)
T 2vgo_A 168 -RRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFP----PFLSDGSKDL 242 (284)
T ss_dssp -CBCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCCCCC----TTSCHHHHHH
T ss_pred -ccccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHhHHHHHHhccccCCC----CcCCHHHHHH
Confidence 2345679999999999875 589999999999999999999999998887777777777655443 4679999999
Q ss_pred HHHhcccCccccCCHHHHhcCcccCcCC
Q 042823 260 VRRMLTKDPKRRITAAQVLEHPWLRESG 287 (477)
Q Consensus 260 i~~~l~~dp~~R~s~~~~l~h~~~~~~~ 287 (477)
|.+||+.||.+|||+.++++||||+...
T Consensus 243 i~~~l~~~p~~Rps~~~ll~h~~~~~~~ 270 (284)
T 2vgo_A 243 ISKLLRYHPPQRLPLKGVMEHPWVKANS 270 (284)
T ss_dssp HHHHSCSSGGGSCCHHHHHTCHHHHHHC
T ss_pred HHHHhhcCHhhCCCHHHHhhCHHHHhhc
Confidence 9999999999999999999999998654
|
| >3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7} | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-50 Score=393.11 Aligned_cols=265 Identities=23% Similarity=0.319 Sum_probs=221.6
Q ss_pred ccccccccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhcc----CCCCeeE
Q 042823 13 ILGKAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLS----GQPNVVE 88 (477)
Q Consensus 13 ~~~~~~~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~----~hpniv~ 88 (477)
+..+....+.++|++++.||+|+||+||+|.+..+++.||+|++... .........|+.++..+. +||||++
T Consensus 25 ~~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~----~~~~~~~~~e~~~l~~l~~~~~~h~~iv~ 100 (360)
T 3llt_A 25 FSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNI----KKYTRSAKIEADILKKIQNDDINNNNIVK 100 (360)
T ss_dssp CCCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC----HHHHHHHHHHHHHHHHTCCCSTTGGGBCC
T ss_pred eeeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccc----hhhhhhhHHHHHHHHHhcccCCCCCCeec
Confidence 45677888999999999999999999999999999999999998632 234456778999998885 4999999
Q ss_pred EEEEEEeCCeEEEEEeccCCCchHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeec------
Q 042823 89 FKSTYEDETAVHVVMELCEGGDLFDRIIAKG--YNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISR------ 160 (477)
Q Consensus 89 ~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~--~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~------ 160 (477)
+++++...+.+|+||||| |++|.+++.... .+++..++.++.||+.||.|||++||+||||||+|||+...
T Consensus 101 ~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~~~~ 179 (360)
T 3llt_A 101 YHGKFMYYDHMCLIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKMSLTHTDLKPENILLDDPYFEKSL 179 (360)
T ss_dssp EEEEEEETTEEEEEECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCTTCCEEE
T ss_pred ccceeeECCeeEEEEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCcccEEEccccccccc
Confidence 999999999999999999 889999998764 58999999999999999999999999999999999999321
Q ss_pred ----------------CCCCCEEEeecCCccccCCCcceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCC
Q 042823 161 ----------------DDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVP 223 (477)
Q Consensus 161 ----------------~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~ 223 (477)
...+.+||+|||++...... .....||+.|+|||++.+ .++.++|||||||++|+|++|.+
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~ 257 (360)
T 3llt_A 180 ITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDY--HGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSL 257 (360)
T ss_dssp EEEECTTTCCEEEEEEESCCCEEECCCTTCEETTSC--CCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSC
T ss_pred cchhcccccccccccccCCCCEEEEeccCceecCCC--CcCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHHHCCC
Confidence 12678999999999865432 245689999999999875 68999999999999999999999
Q ss_pred CCCCCChhhHHHHHHcCCccCCC---------------------CCCC---------------------CCCHHHHHHHH
Q 042823 224 PFWAETKKGTYDAILQGEIDFDT---------------------DPWP---------------------SISSTAKDLVR 261 (477)
Q Consensus 224 pf~~~~~~~~~~~i~~~~~~~~~---------------------~~~~---------------------~~~~~~~~li~ 261 (477)
||...........+.......+. ..|+ ..++.+.+||.
T Consensus 258 pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 337 (360)
T 3llt_A 258 LFRTHEHMEHLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIKHELFCDFLY 337 (360)
T ss_dssp SCCCSSHHHHHHHHHHHTCCCCHHHHHHHTTSGGGGGEETTTTEECTTTTCSCHHHHHHHHTCCCHHHHCCCHHHHHHHH
T ss_pred CCCCCcHHHHHHHHHHhcCCCCHHHHhhhhhccCccccCcccceecCcccccchhhhhhhhhcccccccchHHHHHHHHH
Confidence 99887776665554432211110 0011 12477889999
Q ss_pred HhcccCccccCCHHHHhcCcccC
Q 042823 262 RMLTKDPKRRITAAQVLEHPWLR 284 (477)
Q Consensus 262 ~~l~~dp~~R~s~~~~l~h~~~~ 284 (477)
+||+.||.+|||+.++|+||||+
T Consensus 338 ~~L~~dP~~Rpta~elL~hp~f~ 360 (360)
T 3llt_A 338 SILQIDPTLRPSPAELLKHKFLE 360 (360)
T ss_dssp HHCCSSGGGSCCHHHHTTSGGGC
T ss_pred HHhcCChhhCCCHHHHhcCcccC
Confidence 99999999999999999999995
|
| >3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-50 Score=410.46 Aligned_cols=258 Identities=28% Similarity=0.455 Sum_probs=223.5
Q ss_pred ccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEE
Q 042823 21 VMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVH 100 (477)
Q Consensus 21 ~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~ 100 (477)
-.++|.+.+.||+|+||.||+|+++.+|+.||+|++.+...........+.+|+.++..+ +||||+++++++++...+|
T Consensus 183 ~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l-~hp~Iv~l~~~~~~~~~l~ 261 (543)
T 3c4z_A 183 GEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKV-HSRFIVSLAYAFETKTDLC 261 (543)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHC-CCTTBCCEEEEEECSSEEE
T ss_pred ChhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhc-CCCCEeeEEEEEeeCCEEE
Confidence 457899999999999999999999999999999999764332223456788999999999 7999999999999999999
Q ss_pred EEEeccCCCchHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccc
Q 042823 101 VVMELCEGGDLFDRIIAK----GYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALL 176 (477)
Q Consensus 101 lv~e~~~gg~L~~~l~~~----~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~ 176 (477)
+|||||+||+|.+++... ..+++..++.++.||+.||.|||++||+||||||+||++ +.++.+||+|||++..
T Consensus 262 lVmE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~gIvHrDLKP~NILl---~~~g~vkL~DFGla~~ 338 (543)
T 3c4z_A 262 LVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLL---DDDGNVRISDLGLAVE 338 (543)
T ss_dssp EEECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE---CTTSCEEECCCTTCEE
T ss_pred EEEEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHcCCcccCCChHHEEE---eCCCCEEEeecceeee
Confidence 999999999999999764 368999999999999999999999999999999999999 7888999999999987
Q ss_pred cCCCcc-eecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCC----hhhHHHHHHcCCccCCCCCCC
Q 042823 177 FEEGQV-YRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAET----KKGTYDAILQGEIDFDTDPWP 250 (477)
Q Consensus 177 ~~~~~~-~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~----~~~~~~~i~~~~~~~~~~~~~ 250 (477)
...... ....+||+.|+|||++.+ .|+.++|||||||++|+|++|.+||.+.. .......+......++ +
T Consensus 339 ~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~~~~~~~~i~~~~~~~p----~ 414 (543)
T 3c4z_A 339 LKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYP----D 414 (543)
T ss_dssp CCTTCCCBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCCHHHHHHHHHHCCCCCC----T
T ss_pred ccCCCcccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccchhHHHHHHHHhhcccCCC----c
Confidence 654433 344589999999999976 58999999999999999999999998753 3445556666554443 4
Q ss_pred CCCHHHHHHHHHhcccCccccCC-----HHHHhcCcccCcC
Q 042823 251 SISSTAKDLVRRMLTKDPKRRIT-----AAQVLEHPWLRES 286 (477)
Q Consensus 251 ~~~~~~~~li~~~l~~dp~~R~s-----~~~~l~h~~~~~~ 286 (477)
.+|+.+++||.+||+.||.+||+ +.++++||||+..
T Consensus 415 ~~s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~Hpff~~i 455 (543)
T 3c4z_A 415 KFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRDI 455 (543)
T ss_dssp TSCHHHHHHHHHHSCSSGGGSCCCBTTBSHHHHTSGGGTTC
T ss_pred ccCHHHHHHHHHhccCCHhHCCCCcccCHHHHHcCccccCC
Confidence 68999999999999999999996 5899999999864
|
| >3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.4e-51 Score=391.36 Aligned_cols=265 Identities=26% Similarity=0.364 Sum_probs=222.6
Q ss_pred ccccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeC
Q 042823 17 AYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDE 96 (477)
Q Consensus 17 ~~~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~ 96 (477)
....+.++|++.+.||+|+||.||+|.+..+++.||+|++.............+.+|+.++..+ +||||+++++++...
T Consensus 6 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~ 84 (311)
T 3ork_A 6 TPSHLSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAAL-NHPAIVAVYDTGEAE 84 (311)
T ss_dssp CCSEETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCC-CCTTBCCEEEEEEEE
T ss_pred CcceecCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcC-CCCCcceEEEeeecc
Confidence 3467888999999999999999999999999999999999765544455566788999998888 799999999998765
Q ss_pred C----eEEEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecC
Q 042823 97 T----AVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFG 172 (477)
Q Consensus 97 ~----~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg 172 (477)
. ..|+|||||+||+|.+++...+.+++.++..++.|++.||.|||++||+||||||+||++ +.++.+||+|||
T Consensus 85 ~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~---~~~~~~kl~Dfg 161 (311)
T 3ork_A 85 TPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMI---SATNAVKVMDFG 161 (311)
T ss_dssp ETTEEEEEEEEECCCEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE---ETTSCEEECCCS
T ss_pred CCCCcccEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEE---cCCCCEEEeecc
Confidence 4 359999999999999999988899999999999999999999999999999999999999 677889999999
Q ss_pred CccccCCCc----ceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCC
Q 042823 173 SALLFEEGQ----VYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTD 247 (477)
Q Consensus 173 ~a~~~~~~~----~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~ 247 (477)
++....... ......||+.|+|||++.+ .++.++|||||||++|+|++|..||.+.................+..
T Consensus 162 ~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 241 (311)
T 3ork_A 162 IARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSA 241 (311)
T ss_dssp CC------------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCCCCCHHH
T ss_pred CcccccccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCccc
Confidence 997654322 1234578999999999875 58899999999999999999999999888777766666654443333
Q ss_pred CCCCCCHHHHHHHHHhcccCccccCCHHHHhcCcccCc
Q 042823 248 PWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRE 285 (477)
Q Consensus 248 ~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~ 285 (477)
.++.+|+++.++|.+||+.||++||++.+++.|+|++.
T Consensus 242 ~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~ 279 (311)
T 3ork_A 242 RHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRV 279 (311)
T ss_dssp HSTTCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHH
T ss_pred ccCCCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHH
Confidence 34568999999999999999999999999999999864
|
| >2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-49 Score=393.56 Aligned_cols=258 Identities=24% Similarity=0.389 Sum_probs=215.5
Q ss_pred ccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccC-CCCeeEEEEEEEeCCeE
Q 042823 21 VMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSG-QPNVVEFKSTYEDETAV 99 (477)
Q Consensus 21 ~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~-hpniv~~~~~~~~~~~~ 99 (477)
...+|++++.||+|+||.||+|.+.. ++.||||++..... .......+.+|+.++..+.+ ||||+++++++.....+
T Consensus 54 ~~~~y~~~~~LG~G~fg~Vy~~~~~~-~~~vaiK~~~~~~~-~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~ 131 (390)
T 2zmd_A 54 KGRIYSILKQIGSGGSSKVFQVLNEK-KQIYAIKYVNLEEA-DNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYI 131 (390)
T ss_dssp TTEEEEEEEEEECCSSEEEEEEECTT-CCEEEEEEEECTTC-CHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEE
T ss_pred cCCceEEEEEEccCCCeEEEEEEcCC-CCEEEEEEEecccc-cHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEE
Confidence 34569999999999999999999865 89999999976533 34456778999999999964 69999999999999999
Q ss_pred EEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCC
Q 042823 100 HVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEE 179 (477)
Q Consensus 100 ~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~ 179 (477)
|+||| +.+++|.+++.....+++.++..++.||+.||.|||++||+||||||+|||+ + ++.+||+|||++.....
T Consensus 132 ~lv~E-~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll---~-~~~~kl~DFG~a~~~~~ 206 (390)
T 2zmd_A 132 YMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLI---V-DGMLKLIDFGIANQMQP 206 (390)
T ss_dssp EEEEE-CCSEEHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCCGGGEEE---S-SSCEEECCCSSSCCC--
T ss_pred EEEEe-cCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEE---E-CCeEEEEecCccccccC
Confidence 99999 5678999999998899999999999999999999999999999999999999 2 47899999999987644
Q ss_pred Cc---ceecccccccccchhhhhh------------hcCCccchHhHHHHHHHHhhCCCCCCCCCh-hhHHHHHHcCCcc
Q 042823 180 GQ---VYRDIVGSGFYIAPEVLRR------------RYGKEIDIWSAGVILYILLSGVPPFWAETK-KGTYDAILQGEID 243 (477)
Q Consensus 180 ~~---~~~~~~gt~~y~aPE~~~~------------~~~~~~DiwslG~il~~l~tg~~pf~~~~~-~~~~~~i~~~~~~ 243 (477)
.. .....+||+.|+|||++.+ .++.++|||||||++|+|++|.+||..... ...+..+......
T Consensus 207 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~~~~~ 286 (390)
T 2zmd_A 207 DTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHE 286 (390)
T ss_dssp -------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHCTTSC
T ss_pred CCccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHHHHHHHHHhCcccc
Confidence 32 2245689999999999864 588899999999999999999999977543 3445555554443
Q ss_pred CCCCCCCCCCHHHHHHHHHhcccCccccCCHHHHhcCcccCcCC
Q 042823 244 FDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESG 287 (477)
Q Consensus 244 ~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~~ 287 (477)
...+ ...++++.+||.+||+.||.+|||+.++|+||||+...
T Consensus 287 ~~~~--~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~~~~~~ 328 (390)
T 2zmd_A 287 IEFP--DIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQT 328 (390)
T ss_dssp CCCC--CCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHSCC
T ss_pred CCCC--ccchHHHHHHHHHHcccChhhCCCHHHHhhCcCccccC
Confidence 3322 23578999999999999999999999999999997643
|
| >2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-49 Score=376.85 Aligned_cols=261 Identities=32% Similarity=0.488 Sum_probs=231.8
Q ss_pred cccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeE
Q 042823 20 DVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAV 99 (477)
Q Consensus 20 ~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~ 99 (477)
...++|.+.+.||+|+||.||+|.+..+++.||+|++.+...........+.+|+.++..+ +||||+++++++.+.+..
T Consensus 12 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~ 90 (294)
T 2rku_A 12 RSRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSL-AHQHVVGFHGFFEDNDFV 90 (294)
T ss_dssp TTTEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTC-CCTTBCCEEEEEECSSEE
T ss_pred CcccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhC-CCCCEeeeeeeeccCCEE
Confidence 4567899999999999999999999999999999999776544555667888999999999 799999999999999999
Q ss_pred EEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCC
Q 042823 100 HVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEE 179 (477)
Q Consensus 100 ~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~ 179 (477)
|+||||++|++|.+++...+.+++.++..++.|++.||.|||++|++||||||+||++ +.++.+||+|||++.....
T Consensus 91 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~---~~~~~~kl~dfg~~~~~~~ 167 (294)
T 2rku_A 91 FVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFL---NEDLEVKIGDFGLATKVEY 167 (294)
T ss_dssp EEEEECCTTCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE---CTTCCEEECCCTTCEECCS
T ss_pred EEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEE---cCCCCEEEEeccCceeccc
Confidence 9999999999999999988899999999999999999999999999999999999999 7788999999999987643
Q ss_pred C-cceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCCCCHHHH
Q 042823 180 G-QVYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAK 257 (477)
Q Consensus 180 ~-~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 257 (477)
. .......||+.|+|||++.+ .++.++||||||+++|+|++|..||......+....+.......+ ..+++.+.
T Consensus 168 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~ 243 (294)
T 2rku_A 168 DGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIP----KHINPVAA 243 (294)
T ss_dssp TTCCBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCCCCC----TTSCHHHH
T ss_pred CccccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhhccCCCc----cccCHHHH
Confidence 2 23345679999999999875 588999999999999999999999998887777777776654433 36789999
Q ss_pred HHHHHhcccCccccCCHHHHhcCcccCcCCC
Q 042823 258 DLVRRMLTKDPKRRITAAQVLEHPWLRESGE 288 (477)
Q Consensus 258 ~li~~~l~~dp~~R~s~~~~l~h~~~~~~~~ 288 (477)
++|.+||+.||++|||+.++++||||.....
T Consensus 244 ~li~~~l~~~p~~Rps~~~ll~~~~~~~~~~ 274 (294)
T 2rku_A 244 SLIQKMLQTDPTARPTINELLNDEFFTSGYI 274 (294)
T ss_dssp HHHHHHTCSSGGGSCCGGGGGGSHHHHTSCC
T ss_pred HHHHHHcccChhhCcCHHHHhhChheecCCc
Confidence 9999999999999999999999999986543
|
| >4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-49 Score=379.87 Aligned_cols=263 Identities=27% Similarity=0.373 Sum_probs=222.3
Q ss_pred cccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCC
Q 042823 18 YEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDET 97 (477)
Q Consensus 18 ~~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~ 97 (477)
...+.++|++.+.||+|+||.||+|.+..+++.||+|++.............+.+|+.++.++ +||||+++++++...+
T Consensus 6 g~~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l-~hp~iv~~~~~~~~~~ 84 (294)
T 4eqm_A 6 GKIINERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQL-SHQNIVSMIDVDEEDD 84 (294)
T ss_dssp SSCEETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTC-CBTTBCCEEEEEECSS
T ss_pred hhHhhccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcC-CCCCCceEEEeeeeCC
Confidence 356778999999999999999999999999999999999766555556677889999999999 7999999999999999
Q ss_pred eEEEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCcccc
Q 042823 98 AVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLF 177 (477)
Q Consensus 98 ~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~ 177 (477)
.+|+||||++||+|.+++...+.+++..+..++.|++.||.|||++||+||||||+||++ +.++.+||+|||++...
T Consensus 85 ~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~---~~~~~~kl~Dfg~~~~~ 161 (294)
T 4eqm_A 85 CYYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHAHDMRIVHRDIKPQNILI---DSNKTLKIFDFGIAKAL 161 (294)
T ss_dssp EEEEEEECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE---CTTSCEEECCCSSSTTC
T ss_pred eEEEEEeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEE---CCCCCEEEEeCCCcccc
Confidence 999999999999999999998999999999999999999999999999999999999999 77889999999999876
Q ss_pred CCCc--ceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccC-CCCCCCCCC
Q 042823 178 EEGQ--VYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDF-DTDPWPSIS 253 (477)
Q Consensus 178 ~~~~--~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~-~~~~~~~~~ 253 (477)
.... ......||+.|+|||++.+ .++.++|||||||++|+|+||.+||.+.+............... .....+.+|
T Consensus 162 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (294)
T 4eqm_A 162 SETSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKHIQDSVPNVTTDVRKDIP 241 (294)
T ss_dssp -------------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHHHHHHHSSCCCCHHHHSCTTSC
T ss_pred ccccccccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhhccCCCcchhcccCCC
Confidence 4432 2234579999999999875 57889999999999999999999999887766665555543322 122345789
Q ss_pred HHHHHHHHHhcccCccccCCHHHHhcCcccC
Q 042823 254 STAKDLVRRMLTKDPKRRITAAQVLEHPWLR 284 (477)
Q Consensus 254 ~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~ 284 (477)
+.+.++|.+||+.||.+||+..+.+.+.|..
T Consensus 242 ~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~ 272 (294)
T 4eqm_A 242 QSLSNVILRATEKDKANRYKTIQEMKDDLSS 272 (294)
T ss_dssp HHHHHHHHHHSCSSGGGSCSSHHHHHHHHHT
T ss_pred HHHHHHHHHHhcCCHhHccccHHHHHHHHHH
Confidence 9999999999999999999766666666654
|
| >3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-50 Score=389.45 Aligned_cols=259 Identities=25% Similarity=0.406 Sum_probs=211.4
Q ss_pred ccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 042823 23 LHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVV 102 (477)
Q Consensus 23 ~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~lv 102 (477)
++|++++.||+|+||+||+|.++.+++.||+|++...... .....+.+|+.++..+ +||||+++++++.+.+.+|+|
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv 78 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEE--GAPCTAIREVSLLKDL-KHANIVTLHDIIHTEKSLTLV 78 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC--------CCCCCCCHHHHSCC-CCTTBCCEEEEEECSSCEEEE
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEeccccc--ccchhHHHHHHHHHhc-CCCCCCeeeeEEeeCCEEEEE
Confidence 6899999999999999999999999999999998643211 1111334689999888 799999999999999999999
Q ss_pred EeccCCCchHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCCC-
Q 042823 103 MELCEGGDLFDRIIAKG-YNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEG- 180 (477)
Q Consensus 103 ~e~~~gg~L~~~l~~~~-~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~- 180 (477)
|||++| +|.+++...+ .+++..++.++.||+.||.|||++||+||||||+||++ +.++.+||+|||++......
T Consensus 79 ~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dikp~NIl~---~~~~~~kl~Dfg~a~~~~~~~ 154 (324)
T 3mtl_A 79 FEYLDK-DLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQKVLHRDLKPQNLLI---NERGELKLADFGLARAKSIPT 154 (324)
T ss_dssp EECCSE-EHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEEESSCCGGGEEE---CTTCCEEECSSSEEECC----
T ss_pred eccccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCcCHHHEEE---CCCCCEEEccCcccccccCCc
Confidence 999975 9999888754 58999999999999999999999999999999999999 77789999999998765432
Q ss_pred cceecccccccccchhhhhh--hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCC----------
Q 042823 181 QVYRDIVGSGFYIAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDP---------- 248 (477)
Q Consensus 181 ~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~---------- 248 (477)
.......||+.|+|||++.+ .++.++|||||||++|+|++|.+||.+.+.......+.+.........
T Consensus 155 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 234 (324)
T 3mtl_A 155 KTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEF 234 (324)
T ss_dssp --------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCHHH
T ss_pred cccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHhchhhhcchhh
Confidence 23345678999999999865 589999999999999999999999999887777666654222211111
Q ss_pred ----------------CCCCCHHHHHHHHHhcccCccccCCHHHHhcCcccCcCCC
Q 042823 249 ----------------WPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGE 288 (477)
Q Consensus 249 ----------------~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~~~ 288 (477)
++.+++++.+||.+||+.||.+|||+.++|+||||.....
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~~ 290 (324)
T 3mtl_A 235 KTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHPFFLSLGE 290 (324)
T ss_dssp HHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGGGGCS
T ss_pred cccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhcChhhhhccc
Confidence 2357899999999999999999999999999999987654
|
| >3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-49 Score=397.88 Aligned_cols=266 Identities=29% Similarity=0.458 Sum_probs=214.4
Q ss_pred ccccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeC
Q 042823 17 AYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDE 96 (477)
Q Consensus 17 ~~~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~ 96 (477)
+...+.++|++++.||+|+||+||+|.++.+++.||+|++... .........+.+|+.++..+ +||||+++++++...
T Consensus 20 ~~~~i~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~-~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~ 97 (432)
T 3n9x_A 20 KNVHVPDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRM-FEDLIDCKRILREITILNRL-KSDYIIRLYDLIIPD 97 (432)
T ss_dssp GGCCCCTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECST-TTSHHHHHHHHHHHHHHHHC-CCTTBCCEEEECCCS
T ss_pred CcceecCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCch-hcChHHHHHHHHHHHHHHHc-CCCCcceEEEEEecC
Confidence 4567789999999999999999999999999999999999653 23344567888999999999 699999999999766
Q ss_pred -----CeEEEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeec
Q 042823 97 -----TAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDF 171 (477)
Q Consensus 97 -----~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Df 171 (477)
..+|+||||+. |+|.+++.....+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+||
T Consensus 98 ~~~~~~~~~lv~e~~~-~~L~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl---~~~~~~kL~DF 173 (432)
T 3n9x_A 98 DLLKFDELYIVLEIAD-SDLKKLFKTPIFLTEEHIKTILYNLLLGENFIHESGIIHRDLKPANCLL---NQDCSVKVCDF 173 (432)
T ss_dssp CTTTCCCEEEEEECCS-EEHHHHHHSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE---CTTCCEEECCC
T ss_pred CCCcCCeEEEEEecCC-cCHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHeEE---CCCCCEEEccC
Confidence 67999999996 5999999988889999999999999999999999999999999999999 78889999999
Q ss_pred CCccccCCCc-----------------------ceecccccccccchhhhh--hhcCCccchHhHHHHHHHHhhC-----
Q 042823 172 GSALLFEEGQ-----------------------VYRDIVGSGFYIAPEVLR--RRYGKEIDIWSAGVILYILLSG----- 221 (477)
Q Consensus 172 g~a~~~~~~~-----------------------~~~~~~gt~~y~aPE~~~--~~~~~~~DiwslG~il~~l~tg----- 221 (477)
|+|....... .....+||++|+|||++. ..|+.++|||||||++|+|++|
T Consensus 174 Gla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~ 253 (432)
T 3n9x_A 174 GLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHI 253 (432)
T ss_dssp TTCEEC-------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTC
T ss_pred CCcccccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccccc
Confidence 9998764321 235678999999999863 3599999999999999999984
Q ss_pred ------CCCCCCCCh-----------------hhHHHHHHc-----------------------CCccCCC----CCCCC
Q 042823 222 ------VPPFWAETK-----------------KGTYDAILQ-----------------------GEIDFDT----DPWPS 251 (477)
Q Consensus 222 ------~~pf~~~~~-----------------~~~~~~i~~-----------------------~~~~~~~----~~~~~ 251 (477)
.++|.+.+. ...+..+.. ....... ..++.
T Consensus 254 ~~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~ql~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (432)
T 3n9x_A 254 NDPTNRFPLFPGSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLKNINKPEVIKYIKLFPHRKPINLKQKYPS 333 (432)
T ss_dssp SSGGGCCCSCCCSCSCC----------CHHHHHHHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHSTT
T ss_pred cccccccccCCCccccccCcccccccccccchHHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCCCCCCCCHHHHCCC
Confidence 444444321 111111111 0000000 01356
Q ss_pred CCHHHHHHHHHhcccCccccCCHHHHhcCcccCcCCC
Q 042823 252 ISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGE 288 (477)
Q Consensus 252 ~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~~~ 288 (477)
+|+++.+||.+||+.||.+|||+.++|+||||+....
T Consensus 334 ~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~~~ 370 (432)
T 3n9x_A 334 ISDDGINLLESMLKFNPNKRITIDQALDHPYLKDVRK 370 (432)
T ss_dssp SCHHHHHHHHHHSCSSTTTSCCHHHHHTCGGGTTTCC
T ss_pred CCHHHHHHHHHHhcCCcccCCCHHHHhcChhhhhccC
Confidence 8999999999999999999999999999999987643
|
| >3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-50 Score=389.82 Aligned_cols=255 Identities=29% Similarity=0.458 Sum_probs=219.5
Q ss_pred ccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccch-----hhHHHHHHHHHHHHhccCCCCeeEEEEEE
Q 042823 19 EDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRL-----AENDMIRREIQIRLYLSGQPNVVEFKSTY 93 (477)
Q Consensus 19 ~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~-----~~~~~~~~e~~~~~~l~~hpniv~~~~~~ 93 (477)
..+.++|++.+.||+|+||.||+|.++.+++.||+|++........ .....+.+|+.++..+ +||||+++++++
T Consensus 20 ~~~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~Iv~~~~~~ 98 (335)
T 3dls_A 20 GEYSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRV-EHANIIKVLDIF 98 (335)
T ss_dssp THHHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTC-CCTTBCCEEEEE
T ss_pred cccccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhC-CCCCEeeEEEEE
Confidence 4677899999999999999999999999999999999976542211 1233466799999999 799999999999
Q ss_pred EeCCeEEEEEeccCCC-chHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecC
Q 042823 94 EDETAVHVVMELCEGG-DLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFG 172 (477)
Q Consensus 94 ~~~~~~~lv~e~~~gg-~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg 172 (477)
.+.+.+++||||+.+| +|.+++...+.+++..++.++.||+.||.|||++||+||||||+||++ +.++.+||+|||
T Consensus 99 ~~~~~~~lv~e~~~~g~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll---~~~~~~kL~Dfg 175 (335)
T 3dls_A 99 ENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVGYLRLKDIIHRDIKDENIVI---AEDFTIKLIDFG 175 (335)
T ss_dssp ECSSEEEEEEECCTTSCBHHHHHHTCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE---CTTSCEEECCCT
T ss_pred eeCCEEEEEEEeCCCCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEEeccCHHHEEE---cCCCcEEEeecc
Confidence 9999999999999776 999999998899999999999999999999999999999999999999 778899999999
Q ss_pred CccccCCCcceecccccccccchhhhhhh-c-CCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCC
Q 042823 173 SALLFEEGQVYRDIVGSGFYIAPEVLRRR-Y-GKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWP 250 (477)
Q Consensus 173 ~a~~~~~~~~~~~~~gt~~y~aPE~~~~~-~-~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~ 250 (477)
++.............||+.|+|||++.+. + +.++|||||||++|+|++|..||..... .... ......
T Consensus 176 ~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~------~~~~----~~~~~~ 245 (335)
T 3dls_A 176 SAAYLERGKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEE------TVEA----AIHPPY 245 (335)
T ss_dssp TCEECCTTCCBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGG------GTTT----CCCCSS
T ss_pred cceECCCCCceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHH------HHhh----ccCCCc
Confidence 99887666655667899999999998753 4 7899999999999999999999965321 1111 111223
Q ss_pred CCCHHHHHHHHHhcccCccccCCHHHHhcCcccCcCC
Q 042823 251 SISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESG 287 (477)
Q Consensus 251 ~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~~ 287 (477)
.+|+++.+||.+||+.||++|||+.++++||||+...
T Consensus 246 ~~~~~l~~li~~~L~~dP~~Rps~~ell~hp~~~~~~ 282 (335)
T 3dls_A 246 LVSKELMSLVSGLLQPVPERRTTLEKLVTDPWVTQPV 282 (335)
T ss_dssp CCCHHHHHHHHHHTCSSGGGSCCHHHHHHCTTTTCCC
T ss_pred ccCHHHHHHHHHHccCChhhCcCHHHHhcCccccCCc
Confidence 5799999999999999999999999999999998754
|
| >2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-49 Score=384.05 Aligned_cols=260 Identities=32% Similarity=0.494 Sum_probs=231.6
Q ss_pred cccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeE
Q 042823 20 DVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAV 99 (477)
Q Consensus 20 ~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~ 99 (477)
....+|.+++.||+|+||.||+|.+..+++.||+|++.+...........+.+|+.++..+ +||||+++++++.+.+.+
T Consensus 38 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~ 116 (335)
T 2owb_A 38 RSRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSL-AHQHVVGFHGFFEDNDFV 116 (335)
T ss_dssp TTTEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTC-CCTTBCCEEEEEECSSEE
T ss_pred ccCCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhC-CCCCCCeEEEEEecCCeE
Confidence 4567899999999999999999999999999999999876554555677889999999999 799999999999999999
Q ss_pred EEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCC
Q 042823 100 HVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEE 179 (477)
Q Consensus 100 ~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~ 179 (477)
|+|||||+|++|.+++...+.+++.++..++.||+.||.|||++||+||||||+||++ +.++.+||+|||++.....
T Consensus 117 ~lv~e~~~~~~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~---~~~~~~kl~Dfg~~~~~~~ 193 (335)
T 2owb_A 117 FVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFL---NEDLEVKIGDFGLATKVEY 193 (335)
T ss_dssp EEEECCCTTCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEE---CTTCCEEECCCTTCEECCS
T ss_pred EEEEecCCCCCHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCEecCCCchhEEE---cCCCCEEEeeccCceeccc
Confidence 9999999999999999988899999999999999999999999999999999999999 7788999999999987643
Q ss_pred C-cceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCCCCHHHH
Q 042823 180 G-QVYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAK 257 (477)
Q Consensus 180 ~-~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 257 (477)
. .......||+.|+|||++.+ .++.++|||||||++|+|++|..||...........+......++ ..+++.+.
T Consensus 194 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~----~~~~~~~~ 269 (335)
T 2owb_A 194 DGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIP----KHINPVAA 269 (335)
T ss_dssp TTCCBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCCC----TTSCHHHH
T ss_pred CcccccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHhcCCCCCC----ccCCHHHH
Confidence 2 23345679999999999875 588999999999999999999999998887777777776655433 36789999
Q ss_pred HHHHHhcccCccccCCHHHHhcCcccCcCC
Q 042823 258 DLVRRMLTKDPKRRITAAQVLEHPWLRESG 287 (477)
Q Consensus 258 ~li~~~l~~dp~~R~s~~~~l~h~~~~~~~ 287 (477)
+||.+||+.||++|||+.++++||||....
T Consensus 270 ~li~~~l~~dp~~Rps~~ell~~~~~~~~~ 299 (335)
T 2owb_A 270 SLIQKMLQTDPTARPTINELLNDEFFTSGY 299 (335)
T ss_dssp HHHHHHTCSSGGGSCCGGGGGGSHHHHTSC
T ss_pred HHHHHHccCChhHCcCHHHHhcCccccCCC
Confidence 999999999999999999999999998654
|
| >4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-50 Score=402.77 Aligned_cols=260 Identities=28% Similarity=0.471 Sum_probs=213.6
Q ss_pred ccccccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEE
Q 042823 15 GKAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYE 94 (477)
Q Consensus 15 ~~~~~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~ 94 (477)
....+....+|++.+.||+|+||+||+|.+..++. +|+|++....... .+|+.+++.+ +||||+++++++.
T Consensus 32 ~~~~~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~-~aikk~~~~~~~~-------~~E~~il~~l-~h~niv~l~~~~~ 102 (394)
T 4e7w_A 32 GKTGEQREIAYTNCKVIGNGSFGVVFQAKLVESDE-VAIKKVLQDKRFK-------NRELQIMRIV-KHPNVVDLKAFFY 102 (394)
T ss_dssp SSSCCEEEEEEEEEEEEEEETTEEEEEEEETTTEE-EEEEEEECCTTSC-------CHHHHHHHTC-CCTTBCCEEEEEE
T ss_pred CCCCCcccceEEEeEEEeeCCCeEEEEEEECCCCe-EEEEEEecCcchH-------HHHHHHHHhC-CCCCcceEEEEEE
Confidence 34556677899999999999999999999987665 8888886543221 3689999999 7999999999996
Q ss_pred eCC------eEEEEEeccCCCchHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecC-CC
Q 042823 95 DET------AVHVVMELCEGGDLFDRII----AKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRD-DN 163 (477)
Q Consensus 95 ~~~------~~~lv~e~~~gg~L~~~l~----~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~-~~ 163 (477)
... .+|+|||||+++ +.+.+. ....+++..++.++.||+.||.|||++||+||||||+||++ + ..
T Consensus 103 ~~~~~~~~~~~~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill---~~~~ 178 (394)
T 4e7w_A 103 SNGDKKDEVFLNLVLEYVPET-VYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIGICHRDIKPQNLLL---DPPS 178 (394)
T ss_dssp EESSSSSCEEEEEEEECCSEE-HHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE---ETTT
T ss_pred ecCCCCCceEEEEEeeccCcc-HHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEE---cCCC
Confidence 543 389999999874 444443 25679999999999999999999999999999999999999 4 67
Q ss_pred CCEEEeecCCccccCCCcceecccccccccchhhhhh--hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCC
Q 042823 164 ALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGE 241 (477)
Q Consensus 164 ~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~ 241 (477)
+.+||+|||+|.............||+.|+|||++.+ .|+.++||||+||++|+|++|.+||.+.+....+..+.+..
T Consensus 179 ~~~kL~DFG~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~ 258 (394)
T 4e7w_A 179 GVLKLIDFGSAKILIAGEPNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVL 258 (394)
T ss_dssp TEEEECCCTTCEECCTTCCCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHH
T ss_pred CcEEEeeCCCcccccCCCCCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHh
Confidence 8899999999987765555566789999999999864 58999999999999999999999999888776666554310
Q ss_pred -----------------ccCCC--------CCCCCCCHHHHHHHHHhcccCccccCCHHHHhcCcccCcCC
Q 042823 242 -----------------IDFDT--------DPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESG 287 (477)
Q Consensus 242 -----------------~~~~~--------~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~~ 287 (477)
..++. ...+.+++++.+||.+||+.||.+|||+.++++||||+...
T Consensus 259 g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~ 329 (394)
T 4e7w_A 259 GTPSREQIKTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPFFDELR 329 (394)
T ss_dssp CCCCHHHHHHHCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGSTTT
T ss_pred CCCCHHHHHhhChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcChhhhhhc
Confidence 00110 01234889999999999999999999999999999998654
|
| >2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-49 Score=381.49 Aligned_cols=256 Identities=28% Similarity=0.482 Sum_probs=221.2
Q ss_pred cccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEE
Q 042823 24 HYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVVM 103 (477)
Q Consensus 24 ~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~lv~ 103 (477)
.|...+.||+|+||.||+|.++.+|+.||||++..... .....+.+|+.++..+ +||||+++++++......|+||
T Consensus 46 ~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~---~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~ 121 (321)
T 2c30_A 46 LLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQ---QRRELLFNEVVIMRDY-QHFNVVEMYKSYLVGEELWVLM 121 (321)
T ss_dssp HEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC---CSHHHHHHHHHHHTTC-CCTTBCCEEEEEEETTEEEEEE
T ss_pred hhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccch---hHHHHHHHHHHHHHhC-CCCCcceEEEEEEECCEEEEEE
Confidence 47788899999999999999999999999999875432 2346688999999999 7999999999999999999999
Q ss_pred eccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCCCc-c
Q 042823 104 ELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQ-V 182 (477)
Q Consensus 104 e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~-~ 182 (477)
||++||+|.+++.. ..+++..+..++.|++.||.|||++||+||||||+||++ +.++.+||+|||++....... .
T Consensus 122 e~~~~~~L~~~l~~-~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll---~~~~~~kl~Dfg~~~~~~~~~~~ 197 (321)
T 2c30_A 122 EFLQGGALTDIVSQ-VRLNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDSILL---TLDGRVKLSDFGFCAQISKDVPK 197 (321)
T ss_dssp CCCCSCBHHHHHTT-CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE---CTTCCEEECCCTTCEECCSSSCC
T ss_pred ecCCCCCHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE---CCCCcEEEeeeeeeeecccCccc
Confidence 99999999988754 568999999999999999999999999999999999999 778899999999987764432 2
Q ss_pred eecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCCCCHHHHHHHH
Q 042823 183 YRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVR 261 (477)
Q Consensus 183 ~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~ 261 (477)
.....||+.|+|||++.+ .++.++|||||||++|+|++|..||...........+........ .....+++.+.++|.
T Consensus 198 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~li~ 276 (321)
T 2c30_A 198 RKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPPPKL-KNSHKVSPVLRDFLE 276 (321)
T ss_dssp BCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSSCCCC-TTGGGSCHHHHHHHH
T ss_pred cccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCc-CccccCCHHHHHHHH
Confidence 345689999999999865 589999999999999999999999988877777766665433221 122457899999999
Q ss_pred HhcccCccccCCHHHHhcCcccCcCCC
Q 042823 262 RMLTKDPKRRITAAQVLEHPWLRESGE 288 (477)
Q Consensus 262 ~~l~~dp~~R~s~~~~l~h~~~~~~~~ 288 (477)
+||+.||++|||+.++++||||.....
T Consensus 277 ~~l~~dp~~Rps~~ell~hp~~~~~~~ 303 (321)
T 2c30_A 277 RMLVRDPQERATAQELLDHPFLLQTGL 303 (321)
T ss_dssp HHSCSSTTTSCCHHHHHTSGGGGGCCC
T ss_pred HHccCChhhCcCHHHHhcChhhccCCC
Confidence 999999999999999999999987543
|
| >4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-49 Score=386.13 Aligned_cols=269 Identities=26% Similarity=0.417 Sum_probs=220.9
Q ss_pred ccccccccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEE
Q 042823 13 ILGKAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKST 92 (477)
Q Consensus 13 ~~~~~~~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~ 92 (477)
..-+-+....++|++.+.||+|+||.||+|.+..+++.||+|++..... .......+.+|+.++..+ +||||++++++
T Consensus 15 ~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~ 92 (331)
T 4aaa_A 15 GTENLYFQSMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDD-DKMVKKIAMREIKLLKQL-RHENLVNLLEV 92 (331)
T ss_dssp ----CCCBCGGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSS-CHHHHHHHHHHHHHHHHC-CCTTBCCEEEE
T ss_pred ccchhhhhhhhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCC-chHHHHHHHHHHHHHhhC-CCCCEeeEEEE
Confidence 3345566778899999999999999999999999999999999865432 334456678999999999 69999999999
Q ss_pred EEeCCeEEEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecC
Q 042823 93 YEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFG 172 (477)
Q Consensus 93 ~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg 172 (477)
+.+.+.+|+||||++|++|.+++...+.+++..+..++.||+.||.|||++||+||||||+||++ +.++.+||+|||
T Consensus 93 ~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nil~---~~~~~~kl~Dfg 169 (331)
T 4aaa_A 93 CKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSHNIIHRDIKPENILV---SQSGVVKLCDFG 169 (331)
T ss_dssp EEETTEEEEEEECCSEEHHHHHHHSTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE---CTTSCEEECCCT
T ss_pred eecCCEEEEEEecCCcchHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCEEccCcChheEEE---cCCCcEEEEeCC
Confidence 99999999999999999998887777889999999999999999999999999999999999999 778899999999
Q ss_pred CccccCCC-cceecccccccccchhhhhh--hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCc-------
Q 042823 173 SALLFEEG-QVYRDIVGSGFYIAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEI------- 242 (477)
Q Consensus 173 ~a~~~~~~-~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~------- 242 (477)
++...... .......||+.|+|||++.+ .++.++|||||||++|+|++|.+||.+.........+.....
T Consensus 170 ~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 249 (331)
T 4aaa_A 170 FARTLAAPGEVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQ 249 (331)
T ss_dssp TC------------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHH
T ss_pred CceeecCCccccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhh
Confidence 99765432 23345679999999999875 588999999999999999999999988877665554432100
Q ss_pred ------------cCCC--------CCCCCCCHHHHHHHHHhcccCccccCCHHHHhcCcccCcC
Q 042823 243 ------------DFDT--------DPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRES 286 (477)
Q Consensus 243 ------------~~~~--------~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~ 286 (477)
..+. ..++.+|+.+.+||.+||+.||.+|||+.++|+||||+..
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~hp~f~~~ 313 (331)
T 4aaa_A 250 ELFNKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHHDFFQMD 313 (331)
T ss_dssp HHHHHCGGGTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGSHHHHGG
T ss_pred hHhhhccccccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhcCchhccC
Confidence 0000 0124679999999999999999999999999999999754
|
| >1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-49 Score=374.59 Aligned_cols=258 Identities=19% Similarity=0.315 Sum_probs=218.8
Q ss_pred ccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEe----C
Q 042823 21 VMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYED----E 96 (477)
Q Consensus 21 ~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~----~ 96 (477)
....|++.+.||+|+||.||+|.+..++..||+|++..... .......+.+|+.++..+ +||||+++++++.. .
T Consensus 24 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~-~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~ 101 (290)
T 1t4h_A 24 DGRFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKL-TKSERQRFKEEAEMLKGL-QHPNIVRFYDSWESTVKGK 101 (290)
T ss_dssp TSCEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGS-CHHHHHHHHHHHHHHTTC-CCTTBCCEEEEEEEESSSC
T ss_pred CceeEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhh-CHHHHHHHHHHHHHHHhC-CCCCeeeeeeeeccccCCC
Confidence 34468999999999999999999999999999999875432 344567788999999999 79999999999875 4
Q ss_pred CeEEEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcC--CeeccCCCCceeeeecCCCCCEEEeecCCc
Q 042823 97 TAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMG--VMHRDLKPENFSFISRDDNALLKVTDFGSA 174 (477)
Q Consensus 97 ~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~--ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a 174 (477)
..+|+||||++||+|.+++...+.+++..++.++.||+.||.|||++| |+||||||+||++. ...+.+||+|||++
T Consensus 102 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~--~~~~~~kl~Dfg~~ 179 (290)
T 1t4h_A 102 KCIVLVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFIT--GPTGSVKIGDLGLA 179 (290)
T ss_dssp EEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEES--STTSCEEECCTTGG
T ss_pred ceEEEEEEecCCCCHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHcCCCCEEECCCCHHHEEEE--CCCCCEEEeeCCCc
Confidence 668999999999999999998888999999999999999999999999 99999999999982 26778999999999
Q ss_pred cccCCCcceecccccccccchhhhhhhcCCccchHhHHHHHHHHhhCCCCCCCCChhhHH-HHHHcCCccCCCCCCCCCC
Q 042823 175 LLFEEGQVYRDIVGSGFYIAPEVLRRRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTY-DAILQGEIDFDTDPWPSIS 253 (477)
Q Consensus 175 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~-~~i~~~~~~~~~~~~~~~~ 253 (477)
...... ......||+.|+|||++.+.++.++|||||||++|+|++|..||......... ..+..+.... ......+
T Consensus 180 ~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 256 (290)
T 1t4h_A 180 TLKRAS-FAKAVIGTPEFMAPEMYEEKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPA--SFDKVAI 256 (290)
T ss_dssp GGCCTT-SBEESCSSCCCCCGGGGGTCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCCG--GGGGCCC
T ss_pred cccccc-ccccccCCcCcCCHHHHhccCCCcchHHHHHHHHHHHHhCCCCCCCcCcHHHHHHHHhccCCcc--ccCCCCC
Confidence 765443 33456799999999999988999999999999999999999999875544443 3333332211 1223567
Q ss_pred HHHHHHHHHhcccCccccCCHHHHhcCcccCc
Q 042823 254 STAKDLVRRMLTKDPKRRITAAQVLEHPWLRE 285 (477)
Q Consensus 254 ~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~ 285 (477)
+++.++|.+||+.||.+|||+.++++||||++
T Consensus 257 ~~l~~li~~~l~~dp~~Rps~~ell~h~~f~~ 288 (290)
T 1t4h_A 257 PEVKEIIEGCIRQNKDERYSIKDLLNHAFFQE 288 (290)
T ss_dssp HHHHHHHHHHSCSSGGGSCCHHHHHTSGGGC-
T ss_pred HHHHHHHHHHccCChhhCCCHHHHhhCccccc
Confidence 89999999999999999999999999999975
|
| >2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-49 Score=392.55 Aligned_cols=263 Identities=24% Similarity=0.395 Sum_probs=209.7
Q ss_pred ccccccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEE
Q 042823 15 GKAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYE 94 (477)
Q Consensus 15 ~~~~~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~ 94 (477)
+.....+.++|++++.||+|+||.||+|.+..+++.||+|++.... ........+.+|+.++..+ +||||+++++++.
T Consensus 17 ~~~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~ 94 (371)
T 2xrw_A 17 GDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPF-QNQTHAKRAYRELVLMKCV-NHKNIIGLLNVFT 94 (371)
T ss_dssp TTEEEEEETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTT-SSHHHHHHHHHHHHHHHHC-CCTTBCCEEEEEC
T ss_pred CCcccchhhheeEeeeeEecCCEEEEEEEECCCCceEEEEEecccc-CChHHHHHHHHHHHHHHhc-CCCCccceEEeec
Confidence 3444467889999999999999999999999999999999997543 2334556788999999999 7999999999997
Q ss_pred eCC------eEEEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEE
Q 042823 95 DET------AVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKV 168 (477)
Q Consensus 95 ~~~------~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl 168 (477)
... .+|+|||||+| +|.+.+. ..+++..+..++.||+.||.|||++||+||||||+||++ +.++.+||
T Consensus 95 ~~~~~~~~~~~~lv~e~~~~-~l~~~~~--~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIl~---~~~~~~kl 168 (371)
T 2xrw_A 95 PQKSLEEFQDVYIVMELMDA-NLCQVIQ--MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV---KSDCTLKI 168 (371)
T ss_dssp SCCSTTTCCEEEEEEECCSE-EHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE---CTTSCEEE
T ss_pred cccccccccceEEEEEcCCC-CHHHHHh--hccCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEE---cCCCCEEE
Confidence 665 78999999975 7888875 458999999999999999999999999999999999999 77889999
Q ss_pred eecCCccccCCCcceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCC--
Q 042823 169 TDFGSALLFEEGQVYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFD-- 245 (477)
Q Consensus 169 ~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~-- 245 (477)
+|||++.............||+.|+|||++.+ .++.++|||||||++|+|++|.+||.+.+....+..+........
T Consensus 169 ~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~ 248 (371)
T 2xrw_A 169 LDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPE 248 (371)
T ss_dssp CCCCC----------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHC-CCCCCHH
T ss_pred EEeecccccccccccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHH
Confidence 99999987655544456789999999999875 589999999999999999999999998887777766655321100
Q ss_pred ---------------CCC--------------CCC-------CCHHHHHHHHHhcccCccccCCHHHHhcCcccCc
Q 042823 246 ---------------TDP--------------WPS-------ISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRE 285 (477)
Q Consensus 246 ---------------~~~--------------~~~-------~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~ 285 (477)
.+. ++. .++.+++||.+||+.||.+|||+.++|+||||+.
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~ 324 (371)
T 2xrw_A 249 FMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINV 324 (371)
T ss_dssp HHTTSCHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHSHHHHT
T ss_pred HHHHhhhHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCCcchhh
Confidence 000 011 1567999999999999999999999999999974
|
| >3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-49 Score=376.29 Aligned_cols=259 Identities=29% Similarity=0.521 Sum_probs=198.7
Q ss_pred ccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEE
Q 042823 21 VMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVH 100 (477)
Q Consensus 21 ~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~ 100 (477)
..++|++.+.||+|+||.||+|.+..+++.||+|++.............+.+|+.++..+ +||||+++++++.+.+..|
T Consensus 9 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~ 87 (278)
T 3cok_A 9 KIEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQL-KHPSILELYNYFEDSNYVY 87 (278)
T ss_dssp SGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTB-CCTTBCCEEEEEECSSEEE
T ss_pred ccccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhC-CCCCeEeEEEEEccCCeEE
Confidence 456899999999999999999999999999999998654322223346788999999999 7999999999999999999
Q ss_pred EEEeccCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCC
Q 042823 101 VVMELCEGGDLFDRIIAK-GYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEE 179 (477)
Q Consensus 101 lv~e~~~gg~L~~~l~~~-~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~ 179 (477)
+||||+++++|.+++... ..+++..++.++.|++.||.|||++|++||||||+||++ +.++.+||+|||++.....
T Consensus 88 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nili---~~~~~~kl~dfg~~~~~~~ 164 (278)
T 3cok_A 88 LVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSHGILHRDLTLSNLLL---TRNMNIKIADFGLATQLKM 164 (278)
T ss_dssp EEEECCTTEEHHHHHHTCSSCCCHHHHHHHHHHHHHHHHHHHHTTEECSSCCGGGEEE---CTTCCEEECCCTTCEECC-
T ss_pred EEEecCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE---cCCCCEEEEeecceeeccC
Confidence 999999999999999875 578999999999999999999999999999999999999 7788999999999987643
Q ss_pred C-cceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCCCCHHHH
Q 042823 180 G-QVYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAK 257 (477)
Q Consensus 180 ~-~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 257 (477)
. .......||+.|+|||++.+ .++.++|||||||++|+|++|.+||...........+...... ....+++++.
T Consensus 165 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~ 240 (278)
T 3cok_A 165 PHEKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLADYE----MPSFLSIEAK 240 (278)
T ss_dssp ---------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC-----CCSSCCC----CCTTSCHHHH
T ss_pred CCCcceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHHHHHHhhcccC----CccccCHHHH
Confidence 2 22334578999999999865 5789999999999999999999999876655554443333222 2245799999
Q ss_pred HHHHHhcccCccccCCHHHHhcCcccCcCC
Q 042823 258 DLVRRMLTKDPKRRITAAQVLEHPWLRESG 287 (477)
Q Consensus 258 ~li~~~l~~dp~~R~s~~~~l~h~~~~~~~ 287 (477)
++|.+||+.||++|||+.++++||||....
T Consensus 241 ~li~~~l~~dp~~Rps~~~~l~h~~~~~~~ 270 (278)
T 3cok_A 241 DLIHQLLRRNPADRLSLSSVLDHPFMSRNS 270 (278)
T ss_dssp HHHHHHSCSSGGGSCCHHHHTTSTTTC---
T ss_pred HHHHHHcccCHhhCCCHHHHhcCccccCCC
Confidence 999999999999999999999999998654
|
| >1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-48 Score=370.42 Aligned_cols=258 Identities=22% Similarity=0.348 Sum_probs=215.7
Q ss_pred ccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCe
Q 042823 19 EDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETA 98 (477)
Q Consensus 19 ~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~ 98 (477)
..+.++|++.+.||+|+||.||+|.++.+++.||+|++....... .....+.+|+..+..+.+||||+++++++.+.+.
T Consensus 7 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~ 85 (289)
T 1x8b_A 7 SRYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGS-VDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDH 85 (289)
T ss_dssp CHHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTS-HHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTE
T ss_pred ccccchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEeccccccc-HHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCe
Confidence 346689999999999999999999999999999999987653332 3456778899999998789999999999999999
Q ss_pred EEEEEeccCCCchHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecC-------------
Q 042823 99 VHVVMELCEGGDLFDRIIAK----GYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRD------------- 161 (477)
Q Consensus 99 ~~lv~e~~~gg~L~~~l~~~----~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~------------- 161 (477)
+|+|||||+||+|.+++... +.+++..++.++.||+.||.|||++||+||||||+||++...+
T Consensus 86 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~ 165 (289)
T 1x8b_A 86 MLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDD 165 (289)
T ss_dssp EEEEEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC----------------
T ss_pred EEEEEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhCCEeecCCCHHHEEEcCCCCCccccccccccc
Confidence 99999999999999999865 6789999999999999999999999999999999999994332
Q ss_pred ---CCCCEEEeecCCccccCCCcceecccccccccchhhhhhh--cCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHH
Q 042823 162 ---DNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLRRR--YGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDA 236 (477)
Q Consensus 162 ---~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~ 236 (477)
....+||+|||.+....... ...||+.|+|||++.+. ++.++|||||||++|+|++|.+|+... .....
T Consensus 166 ~~~~~~~~kl~Dfg~~~~~~~~~---~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~---~~~~~ 239 (289)
T 1x8b_A 166 WASNKVMFKIGDLGHVTRISSPQ---VEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNG---DQWHE 239 (289)
T ss_dssp ----CCCEEECCCTTCEETTCSC---CCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSS---HHHHH
T ss_pred ccCCceEEEEcccccccccCCcc---ccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcch---hHHHH
Confidence 45579999999998765432 34699999999999764 557999999999999999999887543 33445
Q ss_pred HHcCCccCCCCCCCCCCHHHHHHHHHhcccCccccCCHHHHhcCcccCcC
Q 042823 237 ILQGEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRES 286 (477)
Q Consensus 237 i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~ 286 (477)
+..+.... ..+.+++.+.++|.+||+.||++|||+.++++||||+..
T Consensus 240 ~~~~~~~~---~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~~~~~ 286 (289)
T 1x8b_A 240 IRQGRLPR---IPQVLSQEFTELLKVMIHPDPERRPSAMALVKHSVLLSA 286 (289)
T ss_dssp HHTTCCCC---CSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTCTTC---
T ss_pred HHcCCCCC---CCcccCHHHHHHHHHHhCCCcccCCCHHHHhhChHhhhh
Confidence 55544322 224689999999999999999999999999999999864
|
| >1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-49 Score=385.97 Aligned_cols=264 Identities=26% Similarity=0.389 Sum_probs=214.0
Q ss_pred ccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccc--hhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeC
Q 042823 19 EDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMR--LAENDMIRREIQIRLYLSGQPNVVEFKSTYEDE 96 (477)
Q Consensus 19 ~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~--~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~ 96 (477)
....++|++++.||+|+||.||+|.+..+|+.||+|++....... ......+.+|+.++..+ +||||+++++++.+.
T Consensus 6 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~ 84 (346)
T 1ua2_A 6 KSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQEL-SHPNIIGLLDAFGHK 84 (346)
T ss_dssp -------CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHC-CCTTBCCEEEEECCT
T ss_pred HHHhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhC-CCCCCCeEEEEEeeC
Confidence 345678999999999999999999999999999999986532211 11123577899999999 799999999999999
Q ss_pred CeEEEEEeccCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCcc
Q 042823 97 TAVHVVMELCEGGDLFDRIIAK-GYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSAL 175 (477)
Q Consensus 97 ~~~~lv~e~~~gg~L~~~l~~~-~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~ 175 (477)
..+|+||||+++ +|.+++... ..+++..+..++.|++.||.|||++||+||||||+||++ +.++.+||+|||++.
T Consensus 85 ~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~---~~~~~~kl~Dfg~a~ 160 (346)
T 1ua2_A 85 SNISLVFDFMET-DLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLL---DENGVLKLADFGLAK 160 (346)
T ss_dssp TCCEEEEECCSE-EHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE---CTTCCEEECCCGGGS
T ss_pred CceEEEEEcCCC-CHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHEEE---cCCCCEEEEecccce
Confidence 999999999986 888888765 368999999999999999999999999999999999999 778899999999998
Q ss_pred ccCCC-cceecccccccccchhhhhh--hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCC----
Q 042823 176 LFEEG-QVYRDIVGSGFYIAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDP---- 248 (477)
Q Consensus 176 ~~~~~-~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~---- 248 (477)
..... .......||+.|+|||++.+ .++.++|||||||++|+|++|.+||.+.+....+..+...........
T Consensus 161 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 240 (346)
T 1ua2_A 161 SFGSPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDM 240 (346)
T ss_dssp TTTSCCCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSST
T ss_pred eccCCcccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHcCCCChhhhhhh
Confidence 76432 23345689999999999864 478999999999999999999999998888777776654321111111
Q ss_pred --------------------CCCCCHHHHHHHHHhcccCccccCCHHHHhcCcccCcCC
Q 042823 249 --------------------WPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESG 287 (477)
Q Consensus 249 --------------------~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~~ 287 (477)
++.+++++++||.+||+.||++|||+.|+|+||||+...
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h~~f~~~~ 299 (346)
T 1ua2_A 241 CSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFSNRP 299 (346)
T ss_dssp TSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTSGGGTSSS
T ss_pred ccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcChhhhcCC
Confidence 145678999999999999999999999999999998654
|
| >3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-49 Score=391.07 Aligned_cols=257 Identities=27% Similarity=0.438 Sum_probs=212.2
Q ss_pred ccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEe---
Q 042823 19 EDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYED--- 95 (477)
Q Consensus 19 ~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~--- 95 (477)
+...++|++++.||+|+||+||+|.+..+|+.||+|++...... ..+|+.+++.+ +||||++++++|..
T Consensus 3 ~~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~-------~~~E~~il~~l-~hpnIv~l~~~~~~~~~ 74 (383)
T 3eb0_A 3 ETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRY-------KNRELDIMKVL-DHVNIIKLVDYFYTTGD 74 (383)
T ss_dssp ---CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTTS-------CCHHHHHHTTC-CCTTBCCEEEEEEEC--
T ss_pred ccccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcch-------HHHHHHHHHHc-CCCCccchhheeeecCc
Confidence 34567899999999999999999999999999999998754322 23689999998 79999999999843
Q ss_pred -----------------------------------CCeEEEEEeccCCCchHHHHH----HcCCCCHHHHHHHHHHHHHH
Q 042823 96 -----------------------------------ETAVHVVMELCEGGDLFDRII----AKGYNSERDAATVLRAIVNA 136 (477)
Q Consensus 96 -----------------------------------~~~~~lv~e~~~gg~L~~~l~----~~~~~~~~~~~~i~~qil~~ 136 (477)
..++++|||||+| +|.+.+. ....+++..++.++.||+.|
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~a 153 (383)
T 3eb0_A 75 EEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPD-TLHKVLKSFIRSGRSIPMNLISIYIYQLFRA 153 (383)
T ss_dssp -----------------------------------CCEEEEEECCCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccccccccccccCCCceEEEEEEecCCc-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHH
Confidence 3458999999985 7766665 35679999999999999999
Q ss_pred HHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCCCcceecccccccccchhhhhh--hcCCccchHhHHHH
Q 042823 137 VNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLRR--RYGKEIDIWSAGVI 214 (477)
Q Consensus 137 L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~i 214 (477)
|.|||++||+||||||+||++. ...+.+||+|||+|.............||+.|+|||++.+ .++.++||||+||+
T Consensus 154 L~~LH~~gi~H~Dikp~Nil~~--~~~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~i 231 (383)
T 3eb0_A 154 VGFIHSLGICHRDIKPQNLLVN--SKDNTLKLCDFGSAKKLIPSEPSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCV 231 (383)
T ss_dssp HHHHHTTTEECSCCCGGGEEEE--TTTTEEEECCCTTCEECCTTSCCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHH
T ss_pred HHHHHHCcCccCccCHHHEEEc--CCCCcEEEEECCCCcccCCCCCCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHH
Confidence 9999999999999999999982 2567899999999987766655566789999999999865 48999999999999
Q ss_pred HHHHhhCCCCCCCCChhhHHHHHHcCC-----------------ccCCC---C-----CCCCCCHHHHHHHHHhcccCcc
Q 042823 215 LYILLSGVPPFWAETKKGTYDAILQGE-----------------IDFDT---D-----PWPSISSTAKDLVRRMLTKDPK 269 (477)
Q Consensus 215 l~~l~tg~~pf~~~~~~~~~~~i~~~~-----------------~~~~~---~-----~~~~~~~~~~~li~~~l~~dp~ 269 (477)
+|+|++|.+||.+.+..+.+..+.+.. ..++. . ..+.+|+++.+||.+||+.||.
T Consensus 232 l~ell~g~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~ 311 (383)
T 3eb0_A 232 FGELILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPD 311 (383)
T ss_dssp HHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGG
T ss_pred HHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCChh
Confidence 999999999999888777766654310 01110 0 1134789999999999999999
Q ss_pred ccCCHHHHhcCcccCcC
Q 042823 270 RRITAAQVLEHPWLRES 286 (477)
Q Consensus 270 ~R~s~~~~l~h~~~~~~ 286 (477)
+|||+.++|+||||+..
T Consensus 312 ~R~t~~e~l~hp~f~~~ 328 (383)
T 3eb0_A 312 LRINPYEAMAHPFFDHL 328 (383)
T ss_dssp GSCCHHHHHTSGGGHHH
T ss_pred hCCCHHHHhcCHHHHHH
Confidence 99999999999999753
|
| >3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-49 Score=383.65 Aligned_cols=263 Identities=37% Similarity=0.648 Sum_probs=194.7
Q ss_pred ccccccccccccc-cccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEe
Q 042823 17 AYEDVMLHYFFGR-MLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYED 95 (477)
Q Consensus 17 ~~~~~~~~Y~~~~-~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~ 95 (477)
....+.++|.+.+ .||+|+||+||+|.++.+++.||+|++.... ...+|+....++.+||||+++++++..
T Consensus 22 ~~~~~~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~--------~~~~e~~~~~~~~~h~~i~~~~~~~~~ 93 (336)
T 3fhr_A 22 KKYAVTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSP--------KARQEVDHHWQASGGPHIVCILDVYEN 93 (336)
T ss_dssp BCSCGGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSH--------HHHHHHHHHHHHTTSTTBCCEEEEEEE
T ss_pred CCccccceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcH--------HHHHHHHHHHHhcCCCChHHHHHHHhh
Confidence 4457888999955 6999999999999999999999999986431 223344444444589999999999976
Q ss_pred ----CCeEEEEEeccCCCchHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEe
Q 042823 96 ----ETAVHVVMELCEGGDLFDRIIAKG--YNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVT 169 (477)
Q Consensus 96 ----~~~~~lv~e~~~gg~L~~~l~~~~--~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~ 169 (477)
...+|+|||||+||+|.+++...+ .+++.+++.++.||+.||.|||++||+||||||+||++...+..+.+||+
T Consensus 94 ~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~~kl~ 173 (336)
T 3fhr_A 94 MHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLT 173 (336)
T ss_dssp EETTEEEEEEEEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSTTCCEEEC
T ss_pred ccCCCceEEEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEEecCCCceEEEe
Confidence 556899999999999999998764 68999999999999999999999999999999999999655556789999
Q ss_pred ecCCccccCCCcceecccccccccchhhhh-hhcCCccchHhHHHHHHHHhhCCCCCCCCChhhH----HHHHHcCCccC
Q 042823 170 DFGSALLFEEGQVYRDIVGSGFYIAPEVLR-RRYGKEIDIWSAGVILYILLSGVPPFWAETKKGT----YDAILQGEIDF 244 (477)
Q Consensus 170 Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~----~~~i~~~~~~~ 244 (477)
|||++...... ......||+.|+|||++. ..++.++|||||||++|+|++|..||........ ...+......+
T Consensus 174 Dfg~~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 252 (336)
T 3fhr_A 174 DFGFAKETTQN-ALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGF 252 (336)
T ss_dssp CCTTCEEC-----------------------CHHHHHHHHHHHHHHHHHHHHSSCCC---------------------CC
T ss_pred ccccceecccc-ccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhhHHHhhhcccccc
Confidence 99999865433 234567899999999985 4688899999999999999999999977654433 23334444555
Q ss_pred CCCCCCCCCHHHHHHHHHhcccCccccCCHHHHhcCcccCcCCC
Q 042823 245 DTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGE 288 (477)
Q Consensus 245 ~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~~~ 288 (477)
+...+..+++++++||.+||+.||.+|||+.++|+||||++...
T Consensus 253 ~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~ 296 (336)
T 3fhr_A 253 PNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNHPWINQSMV 296 (336)
T ss_dssp CTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHSHHHHTGGG
T ss_pred CchhhccCCHHHHHHHHHHCCCChhHCcCHHHHhcCcccccccc
Confidence 66666789999999999999999999999999999999987543
|
| >1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-49 Score=388.92 Aligned_cols=258 Identities=30% Similarity=0.522 Sum_probs=215.8
Q ss_pred cccccccccccccCCeEEEEEEEc---cCCceEEEEEeecCCcc-chhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCC
Q 042823 22 MLHYFFGRMLGRGQFGVSYLCTEN---STNRPYACKSIAKKPKM-RLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDET 97 (477)
Q Consensus 22 ~~~Y~~~~~iG~G~~g~V~~~~~~---~~~~~~aiK~~~~~~~~-~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~ 97 (477)
.++|.+.+.||+|+||.||+|++. .+++.||+|++.+.... .......+.+|+.++..+.+||||+++++++....
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 132 (355)
T 1vzo_A 53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTET 132 (355)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETT
T ss_pred ccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCc
Confidence 378999999999999999999984 58999999998643211 11223345678899999878999999999999999
Q ss_pred eEEEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCcccc
Q 042823 98 AVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLF 177 (477)
Q Consensus 98 ~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~ 177 (477)
.+|+|||||+||+|.+++...+.+++..+..++.||+.||.|||++||+||||||+||++ +.++.+||+|||++...
T Consensus 133 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll---~~~~~~kl~DfG~a~~~ 209 (355)
T 1vzo_A 133 KLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILL---DSNGHVVLTDFGLSKEF 209 (355)
T ss_dssp EEEEEECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE---CTTSCEEESCSSEEEEC
T ss_pred eEEEEeecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEE---CCCCcEEEeeCCCCeec
Confidence 999999999999999999998899999999999999999999999999999999999999 77889999999999765
Q ss_pred CCCc--ceecccccccccchhhhhh---hcCCccchHhHHHHHHHHhhCCCCCCCCChh----hHHHHHHcCCccCCCCC
Q 042823 178 EEGQ--VYRDIVGSGFYIAPEVLRR---RYGKEIDIWSAGVILYILLSGVPPFWAETKK----GTYDAILQGEIDFDTDP 248 (477)
Q Consensus 178 ~~~~--~~~~~~gt~~y~aPE~~~~---~~~~~~DiwslG~il~~l~tg~~pf~~~~~~----~~~~~i~~~~~~~~~~~ 248 (477)
.... .....+||+.|+|||++.+ .++.++|||||||++|+|++|..||...... .....+...... .
T Consensus 210 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~----~ 285 (355)
T 1vzo_A 210 VADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPP----Y 285 (355)
T ss_dssp CGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHHHCCCC----C
T ss_pred ccCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccchHHHHHHHHhccCCC----C
Confidence 3322 2334679999999999974 4788999999999999999999999754332 233333333322 2
Q ss_pred CCCCCHHHHHHHHHhcccCccccC-----CHHHHhcCcccCcC
Q 042823 249 WPSISSTAKDLVRRMLTKDPKRRI-----TAAQVLEHPWLRES 286 (477)
Q Consensus 249 ~~~~~~~~~~li~~~l~~dp~~R~-----s~~~~l~h~~~~~~ 286 (477)
.+.+++.+.+||.+||..||.+|| |+.++++||||...
T Consensus 286 ~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~~f~~~ 328 (355)
T 1vzo_A 286 PQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQKI 328 (355)
T ss_dssp CTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSGGGTTC
T ss_pred CcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCcchhcC
Confidence 356899999999999999999999 99999999999754
|
| >2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-49 Score=389.19 Aligned_cols=266 Identities=26% Similarity=0.384 Sum_probs=207.1
Q ss_pred ccccccccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEE
Q 042823 13 ILGKAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKST 92 (477)
Q Consensus 13 ~~~~~~~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~ 92 (477)
.+++....+.++|++++.||+|+||.||+|.+..+|+.||+|++.... ........+.+|+.++..+ +||||++++++
T Consensus 19 ~~~~~~~~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l-~hpnIv~~~~~ 96 (367)
T 2fst_X 19 ELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF-QSIIHAKRTYRELRLLKHM-KHENVIGLLDV 96 (367)
T ss_dssp EETTEEEEEETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTT-SSHHHHHHHHHHHHHHHHC-CCTTBCCCSEE
T ss_pred eecCcccCCCCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccc-cCHHHHHHHHHHHHHHHhC-CCCCCCcEEEE
Confidence 345667788899999999999999999999999999999999986532 2334566788999999999 69999999999
Q ss_pred EEeC------CeEEEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCE
Q 042823 93 YEDE------TAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALL 166 (477)
Q Consensus 93 ~~~~------~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~ 166 (477)
+... ..+|+||||+ |++|.+++.. +.+++..+..++.||+.||.|||++||+||||||+||++ +.++.+
T Consensus 97 ~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll---~~~~~~ 171 (367)
T 2fst_X 97 FTPARSLEEFNDVYLVTHLM-GADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV---NEDCEL 171 (367)
T ss_dssp ECSCSSGGGCCCCEEEEECC-CEECC------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE---CTTCCE
T ss_pred EecCCccccCCeEEEEeccc-CCCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHhhEEE---CCCCCE
Confidence 9654 5689999999 6799888865 579999999999999999999999999999999999999 778899
Q ss_pred EEeecCCccccCCCcceecccccccccchhhhhh--hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCc--
Q 042823 167 KVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEI-- 242 (477)
Q Consensus 167 kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~-- 242 (477)
||+|||++...... ....+||+.|+|||++.+ .++.++|||||||++|+|++|.+||.+.+....+..+.+...
T Consensus 172 kL~DFG~a~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p 249 (367)
T 2fst_X 172 KILDFGLARHTADE--MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 249 (367)
T ss_dssp EECC-----------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSC
T ss_pred EEeecccccccccc--CCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCC
Confidence 99999999865432 345689999999999865 689999999999999999999999998877666655543110
Q ss_pred ---------------------cCCCC----CCCCCCHHHHHHHHHhcccCccccCCHHHHhcCcccCcCC
Q 042823 243 ---------------------DFDTD----PWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESG 287 (477)
Q Consensus 243 ---------------------~~~~~----~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~~ 287 (477)
..+.. .++.+++.+.+||.+||+.||.+|||+.++|+||||....
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~hp~~~~~~ 319 (367)
T 2fst_X 250 GAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYH 319 (367)
T ss_dssp CHHHHTTCCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTTC
T ss_pred CHHHHHHhhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcChhhhhcc
Confidence 00111 1245789999999999999999999999999999998653
|
| >3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-48 Score=371.67 Aligned_cols=262 Identities=24% Similarity=0.270 Sum_probs=201.5
Q ss_pred ccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCe
Q 042823 19 EDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETA 98 (477)
Q Consensus 19 ~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~ 98 (477)
+...++|++++.||+|+||.||+|.+..+++.||+|++..... .........|...+.+..+||||+++++++.+++.
T Consensus 3 ~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~ 80 (290)
T 3fme_A 3 EVKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVN--SQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGD 80 (290)
T ss_dssp CCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---C--HHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSS
T ss_pred cccHHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccC--cHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCC
Confidence 4566899999999999999999999999999999999865422 22233334444443444489999999999999999
Q ss_pred EEEEEeccCCCchHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHc-CCeeccCCCCceeeeecCCCCCEEEeecCC
Q 042823 99 VHVVMELCEGGDLFDRIIA----KGYNSERDAATVLRAIVNAVNVCHSM-GVMHRDLKPENFSFISRDDNALLKVTDFGS 173 (477)
Q Consensus 99 ~~lv~e~~~gg~L~~~l~~----~~~~~~~~~~~i~~qil~~L~~lH~~-~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~ 173 (477)
.|+||||++| +|.+++.. ...+++..++.++.|++.||.|||++ ||+||||||+||++ +..+.+||+|||+
T Consensus 81 ~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dlkp~Nil~---~~~~~~kl~Dfg~ 156 (290)
T 3fme_A 81 VWICMELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLI---NALGQVKMCDFGI 156 (290)
T ss_dssp EEEEEECCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHSCCCCCCCSGGGCEE---CTTCCEEBCCC--
T ss_pred EEEEEehhcc-chHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEE---CCCCCEEEeecCC
Confidence 9999999975 88777654 56799999999999999999999998 99999999999999 7778999999999
Q ss_pred ccccCCCcceecccccccccchhhhh-----hhcCCccchHhHHHHHHHHhhCCCCCCCC-ChhhHHHHHHcCCccCCCC
Q 042823 174 ALLFEEGQVYRDIVGSGFYIAPEVLR-----RRYGKEIDIWSAGVILYILLSGVPPFWAE-TKKGTYDAILQGEIDFDTD 247 (477)
Q Consensus 174 a~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~DiwslG~il~~l~tg~~pf~~~-~~~~~~~~i~~~~~~~~~~ 247 (477)
+.............||+.|+|||++. ..++.++||||+||++|+|++|..||... ............... ..
T Consensus 157 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~--~~ 234 (290)
T 3fme_A 157 SGYLVDDVAKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSP--QL 234 (290)
T ss_dssp -------------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHHHHSCCC--CC
T ss_pred cccccccccccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHHHHHHHhccCCC--Cc
Confidence 98766555445568999999999962 35888999999999999999999999763 333333333333222 12
Q ss_pred CCCCCCHHHHHHHHHhcccCccccCCHHHHhcCcccCcCCC
Q 042823 248 PWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGE 288 (477)
Q Consensus 248 ~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~~~ 288 (477)
+...+|+++.++|.+||+.||++|||+.++++||||+....
T Consensus 235 ~~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~hp~f~~~~~ 275 (290)
T 3fme_A 235 PADKFSAEFVDFTSQCLKKNSKERPTYPELMQHPFFTLHES 275 (290)
T ss_dssp CTTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHHHHH
T ss_pred ccccCCHHHHHHHHHHhhcChhhCcCHHHHHhCcccccCcc
Confidence 23468999999999999999999999999999999986543
|
| >2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-48 Score=376.45 Aligned_cols=266 Identities=23% Similarity=0.377 Sum_probs=219.6
Q ss_pred ccccccccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEE
Q 042823 13 ILGKAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKST 92 (477)
Q Consensus 13 ~~~~~~~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~ 92 (477)
+.........++|++++.||+|+||.||+|.+..+++.||+|++..... ....+.+|+.++..+.+||||++++++
T Consensus 14 ~~~~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~----~~~~~~~e~~~l~~l~~h~~i~~~~~~ 89 (326)
T 2x7f_A 14 IDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGD----EEEEIKQEINMLKKYSHHRNIATYYGA 89 (326)
T ss_dssp --CCCCCCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSS----TTHHHHHHHHHHHHHCCSTTBCCEEEE
T ss_pred ccchhccCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCcc----cHHHHHHHHHHHHhccCCCCeeeeeeE
Confidence 3344556778899999999999999999999999999999999865432 235678999999998789999999999
Q ss_pred EEe------CCeEEEEEeccCCCchHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCC
Q 042823 93 YED------ETAVHVVMELCEGGDLFDRIIAK--GYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNA 164 (477)
Q Consensus 93 ~~~------~~~~~lv~e~~~gg~L~~~l~~~--~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~ 164 (477)
+.. ...+|+||||++||+|.+++... ..+++..++.++.||+.||.|||++||+||||||+||++ +.++
T Consensus 90 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~---~~~~ 166 (326)
T 2x7f_A 90 FIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLL---TENA 166 (326)
T ss_dssp EEECC--CCCCEEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEE---CTTC
T ss_pred EeeccCccccceEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCcHHHEEE---cCCC
Confidence 987 56899999999999999999864 568999999999999999999999999999999999999 7788
Q ss_pred CEEEeecCCccccCCCc-ceecccccccccchhhhh------hhcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHH
Q 042823 165 LLKVTDFGSALLFEEGQ-VYRDIVGSGFYIAPEVLR------RRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAI 237 (477)
Q Consensus 165 ~~kl~Dfg~a~~~~~~~-~~~~~~gt~~y~aPE~~~------~~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i 237 (477)
.+||+|||++....... ......||+.|+|||++. ..++.++|||||||++|+|++|..||...........+
T Consensus 167 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~ 246 (326)
T 2x7f_A 167 EVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLI 246 (326)
T ss_dssp CEEECCCTTTC-------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHH
T ss_pred CEEEeeCcCceecCcCccccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHHh
Confidence 99999999987654322 234457999999999985 35889999999999999999999999887776666555
Q ss_pred HcCCccCCCCCCCCCCHHHHHHHHHhcccCccccCCHHHHhcCcccCcCC
Q 042823 238 LQGEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESG 287 (477)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~~ 287 (477)
...... ....+.+|+.+.+||.+||..||.+|||+.++++||||+...
T Consensus 247 ~~~~~~--~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~hp~~~~~~ 294 (326)
T 2x7f_A 247 PRNPAP--RLKSKKWSKKFQSFIESCLVKNHSQRPATEQLMKHPFIRDQP 294 (326)
T ss_dssp HHSCCC--CCSCSCSCHHHHHHHHHHCCSSGGGSCCHHHHHTSHHHHCCT
T ss_pred hcCccc--cCCccccCHHHHHHHHHHhccChhhCCCHHHHhhChHHhhCc
Confidence 554322 222356899999999999999999999999999999998653
|
| >3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-48 Score=379.69 Aligned_cols=260 Identities=24% Similarity=0.377 Sum_probs=212.0
Q ss_pred ccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCC-CCeeEEEEEEEeCC
Q 042823 19 EDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQ-PNVVEFKSTYEDET 97 (477)
Q Consensus 19 ~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~h-pniv~~~~~~~~~~ 97 (477)
.....+|++++.||+|+||.||+|.+ .+++.||+|++..... .......+.+|+.++..+.+| |||+++++++.+..
T Consensus 5 ~~~~~~y~i~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~ 82 (343)
T 3dbq_A 5 SVKGRIYSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEA-DNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQ 82 (343)
T ss_dssp ESSSCEEEEEEEESCCSSEEEEEEEC-TTSCEEEEEEEECTTC-CHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS
T ss_pred eeecCEEEEEEEEecCCCeEEEEEEe-CCCCEEEEEEeecccc-chHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCC
Confidence 44566899999999999999999988 4688999999875532 334567789999999999533 99999999999999
Q ss_pred eEEEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCcccc
Q 042823 98 AVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLF 177 (477)
Q Consensus 98 ~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~ 177 (477)
.+|+||| +.+|+|.+++...+.+++.++..++.||+.||.|||++||+||||||+|||+ .++.+||+|||++...
T Consensus 83 ~~~lv~e-~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~iiHrDikp~NIll----~~~~~kl~DFG~a~~~ 157 (343)
T 3dbq_A 83 YIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLI----VDGMLKLIDFGIANQM 157 (343)
T ss_dssp EEEEEEC-CCSEEHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE----ETTEEEECCCSSSCCC
T ss_pred EEEEEEe-CCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEE----ECCcEEEeeccccccc
Confidence 9999999 4578999999999999999999999999999999999999999999999999 2567999999999876
Q ss_pred CCCcc---eecccccccccchhhhh------------hhcCCccchHhHHHHHHHHhhCCCCCCCCChh-hHHHHHHcCC
Q 042823 178 EEGQV---YRDIVGSGFYIAPEVLR------------RRYGKEIDIWSAGVILYILLSGVPPFWAETKK-GTYDAILQGE 241 (477)
Q Consensus 178 ~~~~~---~~~~~gt~~y~aPE~~~------------~~~~~~~DiwslG~il~~l~tg~~pf~~~~~~-~~~~~i~~~~ 241 (477)
..... ....+||+.|+|||++. +.++.++|||||||++|+|++|.+||...... .....+....
T Consensus 158 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~ 237 (343)
T 3dbq_A 158 QPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPN 237 (343)
T ss_dssp ------------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHCTT
T ss_pred CcccccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhHHHHHHHHhcCC
Confidence 44322 23567999999999985 35788999999999999999999999765433 3333444333
Q ss_pred ccCCCCCCCCCCHHHHHHHHHhcccCccccCCHHHHhcCcccCcCC
Q 042823 242 IDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESG 287 (477)
Q Consensus 242 ~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~~ 287 (477)
.... .....++.+.+||.+||+.||.+|||+.++|+||||+...
T Consensus 238 ~~~~--~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~hp~~~~~~ 281 (343)
T 3dbq_A 238 HEIE--FPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQT 281 (343)
T ss_dssp SCCC--CCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHSCC
T ss_pred cccC--CcccCCHHHHHHHHHHcCCChhHCCCHHHHHhCccccccC
Confidence 2222 1234578999999999999999999999999999997643
|
| >3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-49 Score=383.69 Aligned_cols=255 Identities=24% Similarity=0.412 Sum_probs=208.3
Q ss_pred cccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCC--
Q 042823 20 DVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDET-- 97 (477)
Q Consensus 20 ~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~-- 97 (477)
.+.++|++++.||+|+||.||+|+++.+++.||+|++.... .......+.+|+.++.++ +||||++++++|.+..
T Consensus 3 ~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~ 79 (332)
T 3qd2_B 3 RYLTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPN--RELAREKVMREVKALAKL-EHPGIVRYFNAWLETPPE 79 (332)
T ss_dssp HHHHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCS--TTTHHHHHHHHHHHHTSC-CCTTBCCEEEEEEECCSC
T ss_pred hhhhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCC--chhHHHHHHHHHHHHHhC-CCCCEeeEEEEEEEeccc
Confidence 35678999999999999999999999999999999997543 223457789999999999 7999999999986543
Q ss_pred -------------------------------------------------------eEEEEEeccCCCchHHHHHHcCC--
Q 042823 98 -------------------------------------------------------AVHVVMELCEGGDLFDRIIAKGY-- 120 (477)
Q Consensus 98 -------------------------------------------------------~~~lv~e~~~gg~L~~~l~~~~~-- 120 (477)
.+|+|||||+||+|.+++.....
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~ 159 (332)
T 3qd2_B 80 KWQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLE 159 (332)
T ss_dssp HHHHHHHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGG
T ss_pred hhhhhhhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCcc
Confidence 38999999999999999987643
Q ss_pred -CCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCCCc-------------ceecc
Q 042823 121 -NSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQ-------------VYRDI 186 (477)
Q Consensus 121 -~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~-------------~~~~~ 186 (477)
.++..+..++.||+.||.|||++||+||||||+||++ +.++.+||+|||++....... .....
T Consensus 160 ~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll---~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (332)
T 3qd2_B 160 DREHGVCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFF---TMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQ 236 (332)
T ss_dssp GSCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE---CTTCCEEECCCTTCEECSCC--------------CCCSC
T ss_pred chhhHHHHHHHHHHHHHHHHHHhCCeeecCCCcccEEE---eCCCCEEEeecCcccccccchhhcccccccccccccccc
Confidence 4566789999999999999999999999999999999 778899999999998765432 22345
Q ss_pred cccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCCCCHHHHHHHHHhcc
Q 042823 187 VGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLT 265 (477)
Q Consensus 187 ~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~ 265 (477)
.||+.|+|||++.+ .++.++|||||||++|+|++|..|+.. .......+.....+ ..++..++.+.+||.+||+
T Consensus 237 ~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~--~~~~~~~~~~~~~~---~~~~~~~~~~~~li~~~l~ 311 (332)
T 3qd2_B 237 VGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQME--RVRIITDVRNLKFP---LLFTQKYPQEHMMVQDMLS 311 (332)
T ss_dssp C-CGGGSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHH--HHHHHHHHHTTCCC---HHHHHHCHHHHHHHHHHHC
T ss_pred CCCcCccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhH--HHHHHHHhhccCCC---cccccCChhHHHHHHHHcc
Confidence 79999999999875 689999999999999999999877522 12222233332211 1123457889999999999
Q ss_pred cCccccCCHHHHhcCcccCc
Q 042823 266 KDPKRRITAAQVLEHPWLRE 285 (477)
Q Consensus 266 ~dp~~R~s~~~~l~h~~~~~ 285 (477)
.||.+|||+.++++||||++
T Consensus 312 ~~p~~Rps~~~~l~~~~f~~ 331 (332)
T 3qd2_B 312 PSPTERPEATDIIENAIFEN 331 (332)
T ss_dssp SSGGGSCCHHHHHHSTTCCC
T ss_pred CCCCcCCCHHHHhhchhhhc
Confidence 99999999999999999975
|
| >2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-48 Score=374.48 Aligned_cols=265 Identities=26% Similarity=0.360 Sum_probs=220.8
Q ss_pred cccccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEe
Q 042823 16 KAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYED 95 (477)
Q Consensus 16 ~~~~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~ 95 (477)
+....+.++|++++.||+|+||.||+|.+..+++.||+|++.... ......+.+|+.++..+ +||||+++++++..
T Consensus 12 ~~~~~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~---~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~ 87 (302)
T 2j7t_A 12 RRDLDPNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKS---EEELEDYIVEIEILATC-DHPYIVKLLGAYYH 87 (302)
T ss_dssp BSSSCGGGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC-------CCHHHHHHHHHHHHHC-CCTTBCCEEEEEEC
T ss_pred ccccCCccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCC---HHHHHHHHHHHHHHhcC-CCCCEeeeeeeeee
Confidence 445678889999999999999999999999999999999986542 23456788999999999 79999999999999
Q ss_pred CCeEEEEEeccCCCchHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCc
Q 042823 96 ETAVHVVMELCEGGDLFDRIIA-KGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSA 174 (477)
Q Consensus 96 ~~~~~lv~e~~~gg~L~~~l~~-~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a 174 (477)
.+.+|+|||||+|++|.+++.. ...+++..+..++.||+.||.|||++|++||||||+||++ +.++.+||+|||++
T Consensus 88 ~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~---~~~~~~kl~Dfg~~ 164 (302)
T 2j7t_A 88 DGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLM---TLEGDIRLADFGVS 164 (302)
T ss_dssp C-CEEEEEECCTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEE---CTTSCEEECCCHHH
T ss_pred CCeEEEEEEeCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEE---CCCCCEEEEECCCC
Confidence 9999999999999999998876 4669999999999999999999999999999999999999 67788999999987
Q ss_pred cccCCC-cceecccccccccchhhhh------hhcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCC
Q 042823 175 LLFEEG-QVYRDIVGSGFYIAPEVLR------RRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTD 247 (477)
Q Consensus 175 ~~~~~~-~~~~~~~gt~~y~aPE~~~------~~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~ 247 (477)
...... .......||+.|+|||++. ..++.++|||||||++|+|++|.+||...........+........ .
T Consensus 165 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~-~ 243 (302)
T 2j7t_A 165 AKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSDPPTL-L 243 (302)
T ss_dssp HHHHHHHHC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCC-S
T ss_pred ccccccccccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHHhccCCccc-C
Confidence 543211 1223457899999999983 3578899999999999999999999988877777666665543221 1
Q ss_pred CCCCCCHHHHHHHHHhcccCccccCCHHHHhcCcccCcCCC
Q 042823 248 PWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGE 288 (477)
Q Consensus 248 ~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~~~ 288 (477)
....+|..+.++|.+||+.||.+|||+.++++||||.....
T Consensus 244 ~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~~~~~~~~ 284 (302)
T 2j7t_A 244 TPSKWSVEFRDFLKIALDKNPETRPSAAQLLEHPFVSSITS 284 (302)
T ss_dssp SGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTTSTTTTTCCC
T ss_pred CccccCHHHHHHHHHHcccChhhCCCHHHHhcChHHhhhcc
Confidence 12457899999999999999999999999999999987543
|
| >3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-50 Score=395.98 Aligned_cols=251 Identities=14% Similarity=0.165 Sum_probs=205.6
Q ss_pred cccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhcc--CCCCeeEEE-------
Q 042823 20 DVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLS--GQPNVVEFK------- 90 (477)
Q Consensus 20 ~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~--~hpniv~~~------- 90 (477)
...++|++.+.||+|+||.||+|.++.+|+.||||++.............+.+|+.++..+. +|||||+++
T Consensus 70 ~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~ 149 (377)
T 3byv_A 70 ERPRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPF 149 (377)
T ss_dssp CCCEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCS
T ss_pred CCCceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhh
Confidence 34578999999999999999999999999999999998654444456678889995554443 799999998
Q ss_pred EEEEeCCe-----------------EEEEEeccCCCchHHHHHHcCCCCH-------HHHHHHHHHHHHHHHHHHHcCCe
Q 042823 91 STYEDETA-----------------VHVVMELCEGGDLFDRIIAKGYNSE-------RDAATVLRAIVNAVNVCHSMGVM 146 (477)
Q Consensus 91 ~~~~~~~~-----------------~~lv~e~~~gg~L~~~l~~~~~~~~-------~~~~~i~~qil~~L~~lH~~~iv 146 (477)
+++++.+. .|+||||| +|+|.+++...+.+++ ..+..++.||+.||.|||++||+
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~iv 228 (377)
T 3byv_A 150 DLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLV 228 (377)
T ss_dssp EEEECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred hhhhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhCCee
Confidence 77776643 89999999 5799999987665665 77888999999999999999999
Q ss_pred eccCCCCceeeeecCCCCCEEEeecCCccccCCCcceecccccccccchhhhhh------------hcCCccchHhHHHH
Q 042823 147 HRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLRR------------RYGKEIDIWSAGVI 214 (477)
Q Consensus 147 H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~------------~~~~~~DiwslG~i 214 (477)
||||||+|||+ +.++.+||+|||+|..... ......| +.|+|||++.+ .++.++|||||||+
T Consensus 229 HrDikp~NIll---~~~~~~kL~DFG~a~~~~~--~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~i 302 (377)
T 3byv_A 229 HTYLRPVDIVL---DQRGGVFLTGFEHLVRDGA--RVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLV 302 (377)
T ss_dssp CSCCCGGGEEE---CTTCCEEECCGGGCEETTC--EEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHH
T ss_pred cCCCCHHHEEE---cCCCCEEEEechhheecCC--cccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHH
Confidence 99999999999 6778999999999986433 3455678 99999999875 48999999999999
Q ss_pred HHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCCCCHHHHHHHHHhcccCccccCCHHHHhcCcccCc
Q 042823 215 LYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRE 285 (477)
Q Consensus 215 l~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~ 285 (477)
+|+|++|..||.+.........+. ..++.+|+++.+||.+||+.||++|||+.++++||||+.
T Consensus 303 l~elltg~~Pf~~~~~~~~~~~~~--------~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~hp~f~~ 365 (377)
T 3byv_A 303 IYWIWCADLPITKDAALGGSEWIF--------RSCKNIPQPVRALLEGFLRYPKEDRLLPLQAMETPEYEQ 365 (377)
T ss_dssp HHHHHHSSCCC------CCSGGGG--------SSCCCCCHHHHHHHHHHTCSSGGGCCCHHHHHTSHHHHH
T ss_pred HHHHHHCCCCCcccccccchhhhh--------hhccCCCHHHHHHHHHHcCCCchhCCCHHHHhhChHHHH
Confidence 999999999997655433322222 123578999999999999999999999999999999964
|
| >3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-48 Score=391.32 Aligned_cols=262 Identities=26% Similarity=0.371 Sum_probs=216.7
Q ss_pred cccccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhcc-----CCCCeeEEE
Q 042823 16 KAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLS-----GQPNVVEFK 90 (477)
Q Consensus 16 ~~~~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~-----~hpniv~~~ 90 (477)
-+.+.+..+|++++.||+|+||+||+|.+..+++.||+|++... ......+.+|+.++..+. +||||++++
T Consensus 90 ~~~~~~~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~----~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~ 165 (429)
T 3kvw_A 90 VPHDHVAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNE----KRFHRQAAEEIRILEHLRKQDKDNTMNVIHML 165 (429)
T ss_dssp CTTCEETTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSC----HHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEE
T ss_pred cCCCcccCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCc----cchHHHHHHHHHHHHHHhhccccCCcCEEEEE
Confidence 35567888999999999999999999999999999999998643 233456778888887774 578999999
Q ss_pred EEEEeCCeEEEEEeccCCCchHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCC--E
Q 042823 91 STYEDETAVHVVMELCEGGDLFDRIIAKG--YNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNAL--L 166 (477)
Q Consensus 91 ~~~~~~~~~~lv~e~~~gg~L~~~l~~~~--~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~--~ 166 (477)
+++.....+|+||||+. ++|.+++.... .+++..++.++.||+.||.|||++||+||||||+|||+ +..+. +
T Consensus 166 ~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NILl---~~~~~~~v 241 (429)
T 3kvw_A 166 ENFTFRNHICMTFELLS-MNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILL---KQQGRSGI 241 (429)
T ss_dssp EEEEETTEEEEEECCCC-CBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHHTEECSCCSGGGEEE---SSTTSCCE
T ss_pred eecccCCeEEEEEeccC-CCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEE---ccCCCcce
Confidence 99999999999999996 59999998764 48999999999999999999999999999999999999 55554 9
Q ss_pred EEeecCCccccCCCcceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccC-
Q 042823 167 KVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDF- 244 (477)
Q Consensus 167 kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~- 244 (477)
||+|||++...... ....+||+.|+|||++.+ .++.++|||||||++|+|++|.+||.+.+....+..+.......
T Consensus 242 kL~DFG~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~l~~i~~~~~~p~ 319 (429)
T 3kvw_A 242 KVIDFGSSCYEHQR--VYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPS 319 (429)
T ss_dssp EECCCTTCEETTCC--CCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCC
T ss_pred EEeecccceecCCc--ccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCC
Confidence 99999999765432 345689999999999875 58999999999999999999999999887776665544210000
Q ss_pred --------------CCC----------------------------------------CCCCCCHHHHHHHHHhcccCccc
Q 042823 245 --------------DTD----------------------------------------PWPSISSTAKDLVRRMLTKDPKR 270 (477)
Q Consensus 245 --------------~~~----------------------------------------~~~~~~~~~~~li~~~l~~dp~~ 270 (477)
... .....++.+.+||.+||++||++
T Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dli~~~L~~dP~~ 399 (429)
T 3kvw_A 320 QKLLDASKRAKNFVSSKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDPAV 399 (429)
T ss_dssp HHHHHTBTTHHHHBCTTSCBTTSCEECCCC--CEECCEECTTCCEECSTTCSCHHHHTTTCCCHHHHHHHHHHTCSSTTT
T ss_pred HHHHHhhhhhhhccCCCCCcccccccccccccccccccccchhhccCCccchhhHhhccccchHHHHHHHHHHCCCChhh
Confidence 000 00124788999999999999999
Q ss_pred cCCHHHHhcCcccCcCC
Q 042823 271 RITAAQVLEHPWLRESG 287 (477)
Q Consensus 271 R~s~~~~l~h~~~~~~~ 287 (477)
|||+.|+|+||||+...
T Consensus 400 Rpta~e~L~Hpw~~~~~ 416 (429)
T 3kvw_A 400 RMTPGQALRHPWLRRRL 416 (429)
T ss_dssp SCCHHHHHTSTTTC---
T ss_pred CCCHHHHhCChhhccCC
Confidence 99999999999998754
|
| >2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-48 Score=369.72 Aligned_cols=260 Identities=29% Similarity=0.531 Sum_probs=221.8
Q ss_pred ccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEE
Q 042823 21 VMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVH 100 (477)
Q Consensus 21 ~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~ 100 (477)
+.++|++++.||+|+||.||+|.++.+++.||+|++..... ......+.+|+.++..+ +||||+++++++.+.+..|
T Consensus 5 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~ 81 (276)
T 2yex_A 5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA--VDCPENIKKEICINKML-NHENVVKFYGHRREGNIQY 81 (276)
T ss_dssp HHHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGC--TTHHHHHHHHHHHHHTC-CCTTBCCEEEEEEETTEEE
T ss_pred eecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccc--hhhhHHHHHHHHHHHhc-CCCCceeeeeEEEcCCEEE
Confidence 56789999999999999999999999999999999865432 23456788999999999 7999999999999999999
Q ss_pred EEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCCC
Q 042823 101 VVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEG 180 (477)
Q Consensus 101 lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~ 180 (477)
+||||++|++|.+++.....+++..+..++.|++.||.|||++|++||||||+||++ +.++.+||+|||.+......
T Consensus 82 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~---~~~~~~kl~dfg~~~~~~~~ 158 (276)
T 2yex_A 82 LFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL---DERDNLKISDFGLATVFRYN 158 (276)
T ss_dssp EEEECCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE---CTTCCEEECCCTTCEECEET
T ss_pred EEEEecCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCChHHEEE---ccCCCEEEeeCCCccccCCC
Confidence 999999999999999877789999999999999999999999999999999999999 67789999999999765332
Q ss_pred c---ceecccccccccchhhhhh-h-cCCccchHhHHHHHHHHhhCCCCCCCCChhh-HHHHHHcCCccCCCCCCCCCCH
Q 042823 181 Q---VYRDIVGSGFYIAPEVLRR-R-YGKEIDIWSAGVILYILLSGVPPFWAETKKG-TYDAILQGEIDFDTDPWPSISS 254 (477)
Q Consensus 181 ~---~~~~~~gt~~y~aPE~~~~-~-~~~~~DiwslG~il~~l~tg~~pf~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~ 254 (477)
. ......||+.|+|||++.+ . ++.++|||||||++|+|++|..||....... ....+...... ...++.+++
T Consensus 159 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 236 (276)
T 2yex_A 159 NRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTY--LNPWKKIDS 236 (276)
T ss_dssp TEECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHHHHHTTCTT--STTGGGSCH
T ss_pred cchhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHHHhhhcccc--cCchhhcCH
Confidence 2 2345678999999999875 3 3678999999999999999999998765543 33333333222 223457899
Q ss_pred HHHHHHHHhcccCccccCCHHHHhcCcccCcCCC
Q 042823 255 TAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGE 288 (477)
Q Consensus 255 ~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~~~ 288 (477)
.+.++|.+||+.||++|||+.++++||||+....
T Consensus 237 ~~~~li~~~l~~~p~~Rps~~~il~~~~~~~~~~ 270 (276)
T 2yex_A 237 APLALLHKILVENPSARITIPDIKKDRWYNKPLK 270 (276)
T ss_dssp HHHHHHHHHSCSSTTTSCCHHHHTTCTTTTCCCC
T ss_pred HHHHHHHHHCCCCchhCCCHHHHhcCccccChhh
Confidence 9999999999999999999999999999987643
|
| >3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8e-48 Score=368.81 Aligned_cols=263 Identities=27% Similarity=0.410 Sum_probs=227.2
Q ss_pred cccccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEe
Q 042823 16 KAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYED 95 (477)
Q Consensus 16 ~~~~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~ 95 (477)
.......++|.+++.||+|+||.||+|.+..+++.||+|++..... ......+.+|+.++..+ +||||+++++++..
T Consensus 15 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~ 91 (303)
T 3a7i_A 15 NLKADPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEA--EDEIEDIQQEITVLSQC-DSPYVTKYYGSYLK 91 (303)
T ss_dssp TCEECGGGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTC--STTHHHHHHHHHHHHHC-CCTTBCCEEEEEEE
T ss_pred cCCCChHHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEeccccc--HHHHHHHHHHHHHHHhC-CCCCEeEEEEEEec
Confidence 3445677889999999999999999999999999999999875532 23457788999999999 79999999999999
Q ss_pred CCeEEEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCcc
Q 042823 96 ETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSAL 175 (477)
Q Consensus 96 ~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~ 175 (477)
...+|+||||++|++|.+++.. +.+++..+..++.|++.||.|||++||+||||||+||++ +.++.+||+|||++.
T Consensus 92 ~~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~---~~~~~~kl~Dfg~~~ 167 (303)
T 3a7i_A 92 DTKLWIIMEYLGGGSALDLLEP-GPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLL---SEHGEVKLADFGVAG 167 (303)
T ss_dssp TTEEEEEEECCTTEEHHHHHTT-SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE---CTTSCEEECCCTTCE
T ss_pred CCeEEEEEEeCCCCcHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChheEEE---CCCCCEEEeecccce
Confidence 9999999999999999988754 568999999999999999999999999999999999999 778899999999997
Q ss_pred ccCCCc-ceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCCCC
Q 042823 176 LFEEGQ-VYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSIS 253 (477)
Q Consensus 176 ~~~~~~-~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 253 (477)
...... ......||+.|+|||++.+ .++.++|||||||++|+|++|.+||...........+...... .....++
T Consensus 168 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~---~~~~~~~ 244 (303)
T 3a7i_A 168 QLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPP---TLEGNYS 244 (303)
T ss_dssp ECBTTBCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCC---CCCSSCC
T ss_pred ecCccccccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHHHHHHHhhcCCCC---CCccccC
Confidence 765433 2345679999999999875 5889999999999999999999999887776666666554322 2234689
Q ss_pred HHHHHHHHHhcccCccccCCHHHHhcCcccCcCCC
Q 042823 254 STAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGE 288 (477)
Q Consensus 254 ~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~~~ 288 (477)
+.+.+||.+||+.||.+|||+.++++||||.....
T Consensus 245 ~~l~~li~~~l~~dp~~Rps~~~ll~~~~~~~~~~ 279 (303)
T 3a7i_A 245 KPLKEFVEACLNKEPSFRPTAKELLKHKFILRNAK 279 (303)
T ss_dssp HHHHHHHHHHCCSSGGGSCCHHHHTTCHHHHHHCC
T ss_pred HHHHHHHHHHcCCChhhCcCHHHHhhChhhhcCCC
Confidence 99999999999999999999999999999976543
|
| >4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=7e-49 Score=378.97 Aligned_cols=262 Identities=23% Similarity=0.385 Sum_probs=215.5
Q ss_pred cccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCC
Q 042823 18 YEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDET 97 (477)
Q Consensus 18 ~~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~ 97 (477)
...+.++|++.+.||+|+||+||+|.+..+++.||+|++..... ......+.+|+.++..+ +||||+++++++....
T Consensus 4 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~ 80 (319)
T 4euu_A 4 QSTSNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISF--LRPVDVQMREFEVLKKL-NHKNIVKLFAIEEETT 80 (319)
T ss_dssp EECSSEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGG--GSCHHHHHHHHHHHHHC-CCTTBCCEEEEEECTT
T ss_pred ccCCCCCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccc--cchHHHHHHHHHHHHhc-CCCCcceEEEEeecCC
Confidence 34567899999999999999999999999999999999865432 22356678999999999 6999999999998765
Q ss_pred --eEEEEEeccCCCchHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeee-cCCCCCEEEeec
Q 042823 98 --AVHVVMELCEGGDLFDRIIAKGY---NSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFIS-RDDNALLKVTDF 171 (477)
Q Consensus 98 --~~~lv~e~~~gg~L~~~l~~~~~---~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~-~~~~~~~kl~Df 171 (477)
.+|+|||||+||+|.+++..... +++.++..++.||+.||.|||++||+||||||+||++.. .+..+.+||+||
T Consensus 81 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL~Df 160 (319)
T 4euu_A 81 TRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDF 160 (319)
T ss_dssp TCCEEEEEECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEECTTSCEEEEECCC
T ss_pred CceEEEEEeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEeccCCCCceEEEccC
Confidence 78999999999999999986543 899999999999999999999999999999999998743 345567999999
Q ss_pred CCccccCCCcceecccccccccchhhhh---------hhcCCccchHhHHHHHHHHhhCCCCCCCCCh----hhHHHHHH
Q 042823 172 GSALLFEEGQVYRDIVGSGFYIAPEVLR---------RRYGKEIDIWSAGVILYILLSGVPPFWAETK----KGTYDAIL 238 (477)
Q Consensus 172 g~a~~~~~~~~~~~~~gt~~y~aPE~~~---------~~~~~~~DiwslG~il~~l~tg~~pf~~~~~----~~~~~~i~ 238 (477)
|++.............||+.|+|||++. ..++.++|||||||++|+|++|..||..... ......+.
T Consensus 161 g~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~ 240 (319)
T 4euu_A 161 GAARELEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKII 240 (319)
T ss_dssp TTCEECCTTCCBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHH
T ss_pred CCceecCCCCceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHh
Confidence 9998876666556678999999999985 4588999999999999999999999975332 33444444
Q ss_pred cCCccC-------------------C--CCCCCCCCHHHHHHHHHhcccCccccCCHHHHhcCcc
Q 042823 239 QGEIDF-------------------D--TDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPW 282 (477)
Q Consensus 239 ~~~~~~-------------------~--~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~ 282 (477)
.+.... + ......+++.+.++|.+||+.||++|||+.|+|+||-
T Consensus 241 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~ 305 (319)
T 4euu_A 241 TGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETS 305 (319)
T ss_dssp HHCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHH
T ss_pred cCCCcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccH
Confidence 432210 0 0011124567899999999999999999999999973
|
| >3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-48 Score=382.95 Aligned_cols=268 Identities=29% Similarity=0.404 Sum_probs=222.1
Q ss_pred CccccccccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEE
Q 042823 12 PILGKAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKS 91 (477)
Q Consensus 12 ~~~~~~~~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~ 91 (477)
.++....-.+..+|++++.||+|+||.||+|.+..+++.||+|++.... .......+.+|+.++.++ +||||+++++
T Consensus 16 ~~~~g~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l-~h~niv~~~~ 92 (364)
T 3qyz_A 16 EMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFE--HQTYCQRTLREIKILLRF-RHENIIGIND 92 (364)
T ss_dssp CBCC-CBCCCTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTT--CHHHHHHHHHHHHHHHHC-CCTTBCCCCE
T ss_pred EEEccEeccccccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEecccc--CcHHHHHHHHHHHHHHhc-CCCCCcccee
Confidence 3444444566789999999999999999999999999999999986432 234456788999999999 7999999999
Q ss_pred EEEeC-----CeEEEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCE
Q 042823 92 TYEDE-----TAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALL 166 (477)
Q Consensus 92 ~~~~~-----~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~ 166 (477)
++... ..+|+||||+.| +|.+++.. +.+++..+..++.||+.||.|||++||+||||||+||++ +.++.+
T Consensus 93 ~~~~~~~~~~~~~~iv~e~~~~-~L~~~l~~-~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~---~~~~~~ 167 (364)
T 3qyz_A 93 IIRAPTIEQMKDVYIVQDLMET-DLYKLLKT-QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLL---NTTCDL 167 (364)
T ss_dssp EECCSSTTTCCCEEEEEECCSE-EHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE---CTTCCE
T ss_pred EEecCCccccceEEEEEcccCc-CHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChHhEEE---CCCCCE
Confidence 99765 479999999975 99888865 468999999999999999999999999999999999999 778899
Q ss_pred EEeecCCccccCCCcc----eecccccccccchhhhhh--hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcC
Q 042823 167 KVTDFGSALLFEEGQV----YRDIVGSGFYIAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQG 240 (477)
Q Consensus 167 kl~Dfg~a~~~~~~~~----~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~ 240 (477)
||+|||++........ ....+||+.|+|||++.+ .++.++|||||||++|+|++|.+||.+.........+...
T Consensus 168 kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~ 247 (364)
T 3qyz_A 168 KICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGI 247 (364)
T ss_dssp EECCCTTCEECCGGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHHHHHHH
T ss_pred EEEeCcceEecCCCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHHH
Confidence 9999999987643321 234589999999998753 4899999999999999999999999988877766665431
Q ss_pred Ccc--------------------CC---CC----CCCCCCHHHHHHHHHhcccCccccCCHHHHhcCcccCcCC
Q 042823 241 EID--------------------FD---TD----PWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESG 287 (477)
Q Consensus 241 ~~~--------------------~~---~~----~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~~ 287 (477)
... .+ .. .++.+++++.+||.+||+.||++|||+.++|+||||+...
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~ 321 (364)
T 3qyz_A 248 LGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYY 321 (364)
T ss_dssp HCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGTTTC
T ss_pred hCCCCHHHHHHhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhcCcchhhcc
Confidence 100 00 00 1246789999999999999999999999999999998753
|
| >3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-48 Score=376.76 Aligned_cols=255 Identities=27% Similarity=0.469 Sum_probs=212.3
Q ss_pred ccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEe--CCe
Q 042823 21 VMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYED--ETA 98 (477)
Q Consensus 21 ~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~--~~~ 98 (477)
..++|++++.||+|+||.||+|.+..+++.||+|++... ....+.+|+.++..+.+||||+++++++.+ ...
T Consensus 34 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~------~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~ 107 (330)
T 3nsz_A 34 NQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV------KKKKIKREIKILENLRGGPNIITLADIVKDPVSRT 107 (330)
T ss_dssp EGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC------CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCC
T ss_pred CCCceEEEEEecccCCeEEEEEEECCCCcEEEEEEeccc------chHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCc
Confidence 357899999999999999999999999999999998632 235688999999999779999999999987 678
Q ss_pred EEEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCC-CEEEeecCCcccc
Q 042823 99 VHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNA-LLKVTDFGSALLF 177 (477)
Q Consensus 99 ~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~-~~kl~Dfg~a~~~ 177 (477)
.++||||+++++|.+++. .+++..++.++.||+.||.|||++||+||||||+||++ +.++ .+||+|||++...
T Consensus 108 ~~lv~e~~~~~~l~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~---~~~~~~~kl~Dfg~a~~~ 181 (330)
T 3nsz_A 108 PALVFEHVNNTDFKQLYQ---TLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI---DHEHRKLRLIDWGLAEFY 181 (330)
T ss_dssp EEEEEECCCCCCHHHHGG---GCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE---ETTTTEEEECCCTTCEEC
T ss_pred eEEEEeccCchhHHHHHH---hCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEE---cCCCCEEEEEeCCCceEc
Confidence 999999999999988774 48999999999999999999999999999999999999 4344 8999999999877
Q ss_pred CCCcceecccccccccchhhhhh--hcCCccchHhHHHHHHHHhhCCCCCCCCChh-hHHHHH-------------HcCC
Q 042823 178 EEGQVYRDIVGSGFYIAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPFWAETKK-GTYDAI-------------LQGE 241 (477)
Q Consensus 178 ~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~l~tg~~pf~~~~~~-~~~~~i-------------~~~~ 241 (477)
..........||+.|+|||++.+ .++.++|||||||++|+|++|..||...... .....+ ....
T Consensus 182 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 261 (330)
T 3nsz_A 182 HPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYN 261 (330)
T ss_dssp CTTCCCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTT
T ss_pred CCCCccccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHHHHhc
Confidence 66655566789999999999864 5899999999999999999999999654322 221111 1111
Q ss_pred ccC--------------------CCCCCCCCCHHHHHHHHHhcccCccccCCHHHHhcCcccCcCC
Q 042823 242 IDF--------------------DTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESG 287 (477)
Q Consensus 242 ~~~--------------------~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~~ 287 (477)
... .......+++++.+||.+||+.||.+|||+.++|+||||+...
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~hp~f~~~~ 327 (330)
T 3nsz_A 262 IELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVV 327 (330)
T ss_dssp CCCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHTSGGGTTCC
T ss_pred cccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhcCccHhhhc
Confidence 111 0111123799999999999999999999999999999998653
|
| >3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-48 Score=390.25 Aligned_cols=264 Identities=28% Similarity=0.442 Sum_probs=199.8
Q ss_pred ccccccccccc-cccccccCCeEEEEEEEc--cCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEE
Q 042823 17 AYEDVMLHYFF-GRMLGRGQFGVSYLCTEN--STNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTY 93 (477)
Q Consensus 17 ~~~~~~~~Y~~-~~~iG~G~~g~V~~~~~~--~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~ 93 (477)
....+.+.|.+ +++||+|+||+||+|.++ .+++.||+|++..... ...+.+|+.++..+ +||||+++++++
T Consensus 14 ~~~~~~~~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~-----~~~~~~E~~~l~~l-~hpniv~~~~~~ 87 (405)
T 3rgf_A 14 ERERVEDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGI-----SMSACREIALLREL-KHPNVISLQKVF 87 (405)
T ss_dssp HCCCHHHHEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSSC-----CHHHHHHHHHHHHC-CCTTBCCCCEEE
T ss_pred hhhhhhhhhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCC-----CHHHHHHHHHHHhc-CCCCeeeEeeEE
Confidence 45677888988 568999999999999976 5789999999864422 23577899999999 699999999999
Q ss_pred Ee--CCeEEEEEeccCCCchHHHHHHc---------CCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeec-C
Q 042823 94 ED--ETAVHVVMELCEGGDLFDRIIAK---------GYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISR-D 161 (477)
Q Consensus 94 ~~--~~~~~lv~e~~~gg~L~~~l~~~---------~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~-~ 161 (477)
.. ...+|+||||+.| +|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||+... +
T Consensus 88 ~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~Dlkp~NIll~~~~~ 166 (405)
T 3rgf_A 88 LSHADRKVWLLFDYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGP 166 (405)
T ss_dssp EETTTTEEEEEEECCSE-EHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECCSST
T ss_pred ecCCCCeEEEEEeCCCC-CHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCEeCCCcCHHHeEEecCCC
Confidence 54 7789999999975 888887632 248999999999999999999999999999999999999544 4
Q ss_pred CCCCEEEeecCCccccCCC----cceecccccccccchhhhhh--hcCCccchHhHHHHHHHHhhCCCCCCCCChh----
Q 042823 162 DNALLKVTDFGSALLFEEG----QVYRDIVGSGFYIAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPFWAETKK---- 231 (477)
Q Consensus 162 ~~~~~kl~Dfg~a~~~~~~----~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~l~tg~~pf~~~~~~---- 231 (477)
..+.+||+|||+|...... ......+||+.|+|||++.+ .++.++|||||||++|+|++|.+||.+....
T Consensus 167 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~ 246 (405)
T 3rgf_A 167 ERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTS 246 (405)
T ss_dssp TTTCEEECCTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------
T ss_pred CCCcEEEEECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCcccccccc
Confidence 5678999999999876432 22345689999999999875 4899999999999999999999999765432
Q ss_pred -----hHHHHHHcCCccCCCCCCC----------------------------------CCCHHHHHHHHHhcccCccccC
Q 042823 232 -----GTYDAILQGEIDFDTDPWP----------------------------------SISSTAKDLVRRMLTKDPKRRI 272 (477)
Q Consensus 232 -----~~~~~i~~~~~~~~~~~~~----------------------------------~~~~~~~~li~~~l~~dp~~R~ 272 (477)
..+..+...........|+ ..++.+.+||.+||+.||.+||
T Consensus 247 ~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ 326 (405)
T 3rgf_A 247 NPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRI 326 (405)
T ss_dssp CCCCHHHHHHHHHHHCCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSC
T ss_pred ccchHHHHHHHHHhhCCCChhhcchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCC
Confidence 3333332211111111111 2378899999999999999999
Q ss_pred CHHHHhcCcccCcCC
Q 042823 273 TAAQVLEHPWLRESG 287 (477)
Q Consensus 273 s~~~~l~h~~~~~~~ 287 (477)
|+.++|+||||....
T Consensus 327 ta~e~L~hp~f~~~~ 341 (405)
T 3rgf_A 327 TSEQAMQDPYFLEDP 341 (405)
T ss_dssp CHHHHHTSGGGTSSS
T ss_pred CHHHHhcChhhccCC
Confidence 999999999998754
|
| >3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-48 Score=381.03 Aligned_cols=262 Identities=25% Similarity=0.334 Sum_probs=220.2
Q ss_pred cccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCC
Q 042823 18 YEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDET 97 (477)
Q Consensus 18 ~~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~ 97 (477)
.+...++|++.+.||+|+||.||+|.+..+++.||+|++.... .......+.+|+.++..+ +||||+++++++.+++
T Consensus 28 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~ 104 (360)
T 3eqc_A 28 GELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEI--KPAIRNQIIRELQVLHEC-NSPYIVGFYGAFYSDG 104 (360)
T ss_dssp CCCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCC--CHHHHHHHHHHHGGGGGC-CCTTBCCEEEEEEETT
T ss_pred cccccccceeeeeecCCCCeEEEEEEECCCCcEEEEEEecccc--CHHHHHHHHHHHHHHHHC-CCCCEEEEeEEEEECC
Confidence 3456778999999999999999999999999999999987542 334567788999999999 7999999999999999
Q ss_pred eEEEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHc-CCeeccCCCCceeeeecCCCCCEEEeecCCccc
Q 042823 98 AVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSM-GVMHRDLKPENFSFISRDDNALLKVTDFGSALL 176 (477)
Q Consensus 98 ~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~-~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~ 176 (477)
.+|+|||||+||+|.+++...+.+++..+..++.|++.||.|||+. ||+||||||+||++ +.++.+||+|||++..
T Consensus 105 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~---~~~~~~kl~Dfg~~~~ 181 (360)
T 3eqc_A 105 EISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILV---NSRGEIKLCDFGVSGQ 181 (360)
T ss_dssp EEEEEECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEE---CTTCCEEECCCCCCHH
T ss_pred EEEEEEECCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHhCCEEcCCccHHHEEE---CCCCCEEEEECCCCcc
Confidence 9999999999999999999988999999999999999999999996 99999999999999 7788999999999875
Q ss_pred cCCCcceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHH-------------------
Q 042823 177 FEEGQVYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDA------------------- 236 (477)
Q Consensus 177 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~------------------- 236 (477)
.... ......||+.|+|||++.+ .++.++|||||||++|+|++|..||...........
T Consensus 182 ~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (360)
T 3eqc_A 182 LIDS-MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTP 260 (360)
T ss_dssp HHHH-C----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC-----------------
T ss_pred cccc-cccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccC
Confidence 4322 2244579999999999875 589999999999999999999999987655433221
Q ss_pred -----------------------HHcCCccCCCCCCCCCCHHHHHHHHHhcccCccccCCHHHHhcCcccCcCCC
Q 042823 237 -----------------------ILQGEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGE 288 (477)
Q Consensus 237 -----------------------i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~~~ 288 (477)
+..... +..+...+|+++.+||.+||+.||++|||+.++|+||||+....
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~ 333 (360)
T 3eqc_A 261 GRPLNKFGMDSRPPMAIFELLDYIVNEPP--PKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKRSDA 333 (360)
T ss_dssp -------------CCCHHHHHHHHHHSCC--CCCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTSHHHHHHHH
T ss_pred CCcccccccCCCCcccchhhhhHHhccCC--CCCCcccccHHHHHHHHHHhhcChhhCCCHHHHhhChHhhcchH
Confidence 111111 11112347899999999999999999999999999999986543
|
| >1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-48 Score=386.79 Aligned_cols=256 Identities=27% Similarity=0.433 Sum_probs=210.6
Q ss_pred cccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeC---
Q 042823 20 DVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDE--- 96 (477)
Q Consensus 20 ~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~--- 96 (477)
....+|.+.+.||+|+||+||+|.++.+++.||||++...... ..+|+++++.+ +||||++++++|...
T Consensus 51 ~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~~-------~~~E~~il~~l-~hpniv~l~~~~~~~~~~ 122 (420)
T 1j1b_A 51 PQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRF-------KNRELQIMRKL-DHCNIVRLRYFFYSSGEK 122 (420)
T ss_dssp CEEEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCTTS-------CCHHHHHHHTC-CCTTBCCEEEEEEEEETT
T ss_pred cccceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccchh-------HHHHHHHHHHc-CCCCccceeeEEeccCCC
Confidence 3455799999999999999999999999999999998654321 23689999999 799999999998532
Q ss_pred ---CeEEEEEeccCCCchHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEe
Q 042823 97 ---TAVHVVMELCEGGDLFDRIIA----KGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVT 169 (477)
Q Consensus 97 ---~~~~lv~e~~~gg~L~~~l~~----~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~ 169 (477)
.++++||||+++ +|.+.+.. ...+++..++.++.||+.||.|||++||+||||||+|||+. .+.+.+||+
T Consensus 123 ~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NILl~--~~~~~~kl~ 199 (420)
T 1j1b_A 123 KDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLD--PDTAVLKLC 199 (420)
T ss_dssp TTEEEEEEEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEEE--TTTTEEEEC
T ss_pred CcceeEEeehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChhhEEEe--CCCCeEEec
Confidence 247899999986 66666543 56799999999999999999999999999999999999992 234678999
Q ss_pred ecCCccccCCCcceecccccccccchhhhhh--hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcC-------
Q 042823 170 DFGSALLFEEGQVYRDIVGSGFYIAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQG------- 240 (477)
Q Consensus 170 Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~------- 240 (477)
|||++............+||+.|+|||++.+ .|+.++|||||||++|+|++|.+||.+.+....+..+.+.
T Consensus 200 DFG~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~l~~i~~~lg~p~~~ 279 (420)
T 1j1b_A 200 DFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTRE 279 (420)
T ss_dssp CCTTCEECCTTCCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHH
T ss_pred cchhhhhcccCCCceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHH
Confidence 9999987655555556789999999999864 5899999999999999999999999988776666555431
Q ss_pred ----------CccCCC---CC-----CCCCCHHHHHHHHHhcccCccccCCHHHHhcCcccCcC
Q 042823 241 ----------EIDFDT---DP-----WPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRES 286 (477)
Q Consensus 241 ----------~~~~~~---~~-----~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~ 286 (477)
...++. .+ .+.+++++.+||.+||+.||.+|||+.++++||||...
T Consensus 280 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~hp~f~~~ 343 (420)
T 1j1b_A 280 QIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDEL 343 (420)
T ss_dssp HHHHHCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGGG
T ss_pred HHHhhChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhCCHhhccc
Confidence 011111 01 13568999999999999999999999999999999754
|
| >3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-49 Score=388.15 Aligned_cols=259 Identities=15% Similarity=0.145 Sum_probs=199.2
Q ss_pred cccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhcc-CCCCeeEEE-------EEE
Q 042823 22 MLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLS-GQPNVVEFK-------STY 93 (477)
Q Consensus 22 ~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~-~hpniv~~~-------~~~ 93 (477)
...|.+.+.||+|+||+||+|.+..+++.||+|++.............+.+|+.++..+. +||||++++ +++
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~ 140 (371)
T 3q60_A 61 ERKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAV 140 (371)
T ss_dssp EEEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEE
T ss_pred ceeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehhe
Confidence 445999999999999999999999999999999998765444456677888876666664 599988865 555
Q ss_pred EeC-----------------CeEEEEEeccCCCchHHHHHHc-CCCCHHHH------HHHHHHHHHHHHHHHHcCCeecc
Q 042823 94 EDE-----------------TAVHVVMELCEGGDLFDRIIAK-GYNSERDA------ATVLRAIVNAVNVCHSMGVMHRD 149 (477)
Q Consensus 94 ~~~-----------------~~~~lv~e~~~gg~L~~~l~~~-~~~~~~~~------~~i~~qil~~L~~lH~~~ivH~d 149 (477)
... ..+|+|||||+ |+|.+++... ..++.... ..++.||+.||.|||++||+|||
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~~ivHrD 219 (371)
T 3q60_A 141 AVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDFVYVFRGDEGILALHILTAQLIRLAANLQSKGLVHGH 219 (371)
T ss_dssp EETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHHHTTEEETT
T ss_pred ecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhccccchhhhhhhhhHHHHHHHHHHHHHHHHHCCCccCc
Confidence 543 34899999998 7999999874 33444444 56779999999999999999999
Q ss_pred CCCCceeeeecCCCCCEEEeecCCccccCCCcceecccccccccchhhhhh---hcCCccchHhHHHHHHHHhhCCCCCC
Q 042823 150 LKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLRR---RYGKEIDIWSAGVILYILLSGVPPFW 226 (477)
Q Consensus 150 lkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~DiwslG~il~~l~tg~~pf~ 226 (477)
|||+|||+ +.++.+||+|||+|...... .....+|+.|+|||++.+ .++.++|||||||++|+|++|.+||.
T Consensus 220 ikp~NIll---~~~~~~kL~DFG~a~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~Pf~ 294 (371)
T 3q60_A 220 FTPDNLFI---MPDGRLMLGDVSALWKVGTR--GPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFG 294 (371)
T ss_dssp CSGGGEEE---CTTSCEEECCGGGEEETTCE--EEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCSTT
T ss_pred CCHHHEEE---CCCCCEEEEecceeeecCCC--ccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCCCC
Confidence 99999999 77889999999999866432 224567899999999974 58999999999999999999999998
Q ss_pred CCChhhHH--HH---HHcCCccCCCCCCCCCCHHHHHHHHHhcccCccccCCHHHHhcCcccCcC
Q 042823 227 AETKKGTY--DA---ILQGEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRES 286 (477)
Q Consensus 227 ~~~~~~~~--~~---i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~ 286 (477)
+....... .. .......+..+.++.+|+.+.+||.+||+.||++|||+.++|+||||+..
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~ 359 (371)
T 3q60_A 295 LVTPGIKGSWKRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAMETPEFLQL 359 (371)
T ss_dssp BCCTTCTTCCCBCCTTSCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTTSHHHHHH
T ss_pred CcCcccccchhhhhhhhccccccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCHHHHHH
Confidence 76432110 00 11111222333345789999999999999999999999999999999753
|
| >3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-47 Score=369.69 Aligned_cols=262 Identities=27% Similarity=0.412 Sum_probs=216.2
Q ss_pred cccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCC
Q 042823 18 YEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDET 97 (477)
Q Consensus 18 ~~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~ 97 (477)
.....++|.+.+.||+|+||.||+|.++.+|+.||+|++.... ....+.+|+.++..+ +||||+++++++...+
T Consensus 24 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-----~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~ 97 (314)
T 3com_A 24 TKQPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES-----DLQEIIKEISIMQQC-DSPHVVKYYGSYFKNT 97 (314)
T ss_dssp ------CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS-----CCHHHHHHHHHHHTC-CCTTBCCEEEEEEETT
T ss_pred hhcchhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH-----HHHHHHHHHHHHHhC-CCCCCccEEEEEEeCC
Confidence 4466788999999999999999999999999999999987542 235678899999999 7999999999999999
Q ss_pred eEEEEEeccCCCchHHHHH-HcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccc
Q 042823 98 AVHVVMELCEGGDLFDRII-AKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALL 176 (477)
Q Consensus 98 ~~~lv~e~~~gg~L~~~l~-~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~ 176 (477)
.+|+||||++||+|.+++. ....+++..+..++.|++.||.|||++|++||||||+||++ +.++.+||+|||++..
T Consensus 98 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dl~p~Nil~---~~~~~~kl~dfg~~~~ 174 (314)
T 3com_A 98 DLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILL---NTEGHAKLADFGVAGQ 174 (314)
T ss_dssp EEEEEEECCTTEEHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE---CTTCCEEECCCTTCEE
T ss_pred EEEEEeecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCcCHHHEEE---CCCCCEEEeecccchh
Confidence 9999999999999999987 45679999999999999999999999999999999999999 7778999999999976
Q ss_pred cCCCc-ceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCCCCH
Q 042823 177 FEEGQ-VYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISS 254 (477)
Q Consensus 177 ~~~~~-~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 254 (477)
..... ......||+.|+|||++.+ .++.++|||||||++|+|++|..||...........+....... ......+++
T Consensus 175 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 253 (314)
T 3com_A 175 LTDTMAKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIFMIPTNPPPT-FRKPELWSD 253 (314)
T ss_dssp CBTTBSCBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCC-CSSGGGSCH
T ss_pred hhhhccccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCcc-cCCcccCCH
Confidence 64432 2345579999999999875 58999999999999999999999998877665555444432211 111235789
Q ss_pred HHHHHHHHhcccCccccCCHHHHhcCcccCcCCCC
Q 042823 255 TAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEA 289 (477)
Q Consensus 255 ~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~~~~ 289 (477)
.+.+||.+||..||.+|||+.++++||||+.....
T Consensus 254 ~l~~li~~~l~~dp~~Rpt~~~ll~~~~~~~~~~~ 288 (314)
T 3com_A 254 NFTDFVKQCLVKSPEQRATATQLLQHPFVRSAKGV 288 (314)
T ss_dssp HHHHHHHHHTCSCTTTSCCHHHHTTSHHHHTCCCG
T ss_pred HHHHHHHHHccCChhhCcCHHHHHhCHHHhcCCcc
Confidence 99999999999999999999999999999876543
|
| >4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-48 Score=381.76 Aligned_cols=262 Identities=26% Similarity=0.387 Sum_probs=216.7
Q ss_pred ccccccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEE
Q 042823 15 GKAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYE 94 (477)
Q Consensus 15 ~~~~~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~ 94 (477)
+.....+.++|.+.+.||+|+||.||+|.++.+|+.||+|++.... ........+.+|+.++..+ +||||+++++++.
T Consensus 34 ~~~~~~l~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~ 111 (371)
T 4exu_A 34 NKTAWELPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPF-QSEIFAKRAYRELLLLKHM-QHENVIGLLDVFT 111 (371)
T ss_dssp TTEEEEEETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTT-SSHHHHHHHHHHHHHHHHC-CCTTBCCCSEEEC
T ss_pred ccceecccccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccc-cchhHHHHHHHHHHHHHhc-CCCCchhhhhhee
Confidence 4455678899999999999999999999999999999999986543 2334467788999999999 6999999999998
Q ss_pred eCCeE------EEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEE
Q 042823 95 DETAV------HVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKV 168 (477)
Q Consensus 95 ~~~~~------~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl 168 (477)
..... |+||||+. ++|.+++ ...+++..+..++.||+.||.|||++||+||||||+||++ +.++.+||
T Consensus 112 ~~~~~~~~~~~~lv~e~~~-~~l~~~~--~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll---~~~~~~kL 185 (371)
T 4exu_A 112 PASSLRNFYDFYLVMPFMQ-TDLQKIM--GMEFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAV---NEDCELKI 185 (371)
T ss_dssp SCSSSTTCCCCEEEEECCC-EEHHHHT--TSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE---CTTCCEEE
T ss_pred ccCCcccceeEEEEEcccc-ccHHHHh--hcCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCcCHHHeEE---CCCCCEEE
Confidence 77654 99999997 5887776 3458999999999999999999999999999999999999 77889999
Q ss_pred eecCCccccCCCcceecccccccccchhhhhh--hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCcc---
Q 042823 169 TDFGSALLFEEGQVYRDIVGSGFYIAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEID--- 243 (477)
Q Consensus 169 ~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~--- 243 (477)
+|||++...... .....||+.|+|||++.+ .++.++|||||||++|+|++|.+||.+.+..+....+......
T Consensus 186 ~Dfg~a~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~ 263 (371)
T 4exu_A 186 LDFGLARHADAE--MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGT 263 (371)
T ss_dssp CSTTCC----------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCH
T ss_pred EecCcccccccC--cCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCcH
Confidence 999999865432 345688999999999865 6899999999999999999999999888766666555431100
Q ss_pred --------------------CCC----CCCCCCCHHHHHHHHHhcccCccccCCHHHHhcCcccCcC
Q 042823 244 --------------------FDT----DPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRES 286 (477)
Q Consensus 244 --------------------~~~----~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~ 286 (477)
... ..++.+++.+.+||.+||+.||++|||+.++|+||||+..
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~ 330 (371)
T 4exu_A 264 EFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFEPF 330 (371)
T ss_dssp HHHTTCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGGTTT
T ss_pred HHHHHhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcCcccccC
Confidence 000 0124679999999999999999999999999999999854
|
| >2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-48 Score=371.10 Aligned_cols=265 Identities=25% Similarity=0.410 Sum_probs=200.3
Q ss_pred ccccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeC
Q 042823 17 AYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDE 96 (477)
Q Consensus 17 ~~~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~ 96 (477)
++....++|++.+.||+|+||.||+|.+..+++.||+|++..... ......+.+|+.++..+ .||||+++++++...
T Consensus 9 p~~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~ 85 (303)
T 2vwi_A 9 PWSINRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKC--QTSMDELLKEIQAMSQC-HHPNIVSYYTSFVVK 85 (303)
T ss_dssp ----CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC------------------CCCCC-CCTTBCCEEEEEESS
T ss_pred ccccchhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhc--chhHHHHHHHHHHHhhc-CCCCEeeEEEEEeec
Confidence 455667899999999999999999999998999999998864322 22345678899998888 799999999999999
Q ss_pred CeEEEEEeccCCCchHHHHHH--------cCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEE
Q 042823 97 TAVHVVMELCEGGDLFDRIIA--------KGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKV 168 (477)
Q Consensus 97 ~~~~lv~e~~~gg~L~~~l~~--------~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl 168 (477)
+..|+||||++||+|.+++.. .+.+++..+..++.||+.||.|||++|++||||||+||++ +.++.+||
T Consensus 86 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~---~~~~~~kl 162 (303)
T 2vwi_A 86 DELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILL---GEDGSVQI 162 (303)
T ss_dssp SCEEEEEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEE---CTTCCEEE
T ss_pred CCcEEEehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCCChhhEEE---cCCCCEEE
Confidence 999999999999999999874 4568999999999999999999999999999999999999 77889999
Q ss_pred eecCCccccCCCc------ceecccccccccchhhhhh--hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcC
Q 042823 169 TDFGSALLFEEGQ------VYRDIVGSGFYIAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQG 240 (477)
Q Consensus 169 ~Dfg~a~~~~~~~------~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~ 240 (477)
+|||++....... ......||+.|+|||++.+ .++.++|||||||++|+|++|..||...............
T Consensus 163 ~dfg~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~ 242 (303)
T 2vwi_A 163 ADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQN 242 (303)
T ss_dssp CCCHHHHHCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHHTS
T ss_pred EeccchheeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhHHHHHhcc
Confidence 9999887653321 1234579999999999864 5899999999999999999999999887776666555544
Q ss_pred CccCC------CCCCCCCCHHHHHHHHHhcccCccccCCHHHHhcCcccCcCC
Q 042823 241 EIDFD------TDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESG 287 (477)
Q Consensus 241 ~~~~~------~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~~ 287 (477)
..... ...+..+++.+.++|.+||+.||.+|||+.++++||||+...
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~~~~~~ 295 (303)
T 2vwi_A 243 DPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFFQKAK 295 (303)
T ss_dssp SCCCTTC-----CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHTSTTC----
T ss_pred CCCccccccccchhhhhhhHHHHHHHHHHccCChhhCcCHHHHhhChhhhcCC
Confidence 32211 122356889999999999999999999999999999998654
|
| >3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-47 Score=366.89 Aligned_cols=264 Identities=22% Similarity=0.307 Sum_probs=212.4
Q ss_pred ccccccccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEE
Q 042823 13 ILGKAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKST 92 (477)
Q Consensus 13 ~~~~~~~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~ 92 (477)
..+...+....+|++.+.||+|+||+||+|.+ +++.||+|++..... .......+.+|+.++.++ +||||++++++
T Consensus 27 ~~~~~~~i~~~~y~i~~~lG~G~~g~V~~~~~--~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~ 102 (309)
T 3p86_A 27 MDGDDMDIPWCDLNIKEKIGAGSFGTVHRAEW--HGSDVAVKILMEQDF-HAERVNEFLREVAIMKRL-RHPNIVLFMGA 102 (309)
T ss_dssp -----CBCCGGGEEEEEEEEECSSEEEEEEEE--TTEEEEEEEECCCCC-SHHHHHHHHHHHHHHHHC-CCTTBCCEEEE
T ss_pred CCcccccCChhHceeeeEeecCCCeEEEEEEE--CCCcEEEEEecCCCC-CHHHHHHHHHHHHHHHhC-CCCCEeeEEEE
Confidence 44566677788999999999999999999986 588999999875432 334556788999999999 69999999999
Q ss_pred EEeCCeEEEEEeccCCCchHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHHcC--CeeccCCCCceeeeecCCCCCEE
Q 042823 93 YEDETAVHVVMELCEGGDLFDRIIAKGY---NSERDAATVLRAIVNAVNVCHSMG--VMHRDLKPENFSFISRDDNALLK 167 (477)
Q Consensus 93 ~~~~~~~~lv~e~~~gg~L~~~l~~~~~---~~~~~~~~i~~qil~~L~~lH~~~--ivH~dlkp~Nil~~~~~~~~~~k 167 (477)
+.+...+|+|||||+||+|.+++...+. +++..+..++.||+.||.|||++| |+||||||+||++ +.++.+|
T Consensus 103 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~ivH~Dikp~NIll---~~~~~~k 179 (309)
T 3p86_A 103 VTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLV---DKKYTVK 179 (309)
T ss_dssp ECSTTCCEEEEECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTSSSCCCCTTCCGGGEEE---CTTCCEE
T ss_pred EEECCceEEEEecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCEECCCCChhhEEE---eCCCcEE
Confidence 9999999999999999999999987653 899999999999999999999999 9999999999999 7788999
Q ss_pred EeecCCccccCCCc-ceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCC
Q 042823 168 VTDFGSALLFEEGQ-VYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFD 245 (477)
Q Consensus 168 l~Dfg~a~~~~~~~-~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~ 245 (477)
|+|||++....... ......||+.|+|||++.+ .++.++|||||||++|+|++|..||...........+........
T Consensus 180 L~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~ 259 (309)
T 3p86_A 180 VCDFGLSRLKASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKRLE 259 (309)
T ss_dssp ECCCC-----------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHHHSCCCCC
T ss_pred ECCCCCCccccccccccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCC
Confidence 99999997654332 2345679999999999875 589999999999999999999999998887777666644333222
Q ss_pred CCCCCCCCHHHHHHHHHhcccCccccCCHHHHhc--CcccCc
Q 042823 246 TDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLE--HPWLRE 285 (477)
Q Consensus 246 ~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~--h~~~~~ 285 (477)
..+.+++.+.+||.+||+.||.+|||+.++++ +++++.
T Consensus 260 --~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~ 299 (309)
T 3p86_A 260 --IPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKS 299 (309)
T ss_dssp --CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC-
T ss_pred --CCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence 22468999999999999999999999999987 445543
|
| >2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.4e-48 Score=381.12 Aligned_cols=265 Identities=25% Similarity=0.362 Sum_probs=217.8
Q ss_pred cccccccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCC-----eeE
Q 042823 14 LGKAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPN-----VVE 88 (477)
Q Consensus 14 ~~~~~~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpn-----iv~ 88 (477)
.....+.+.++|++.+.||+|+||+||+|.++.+++.||+|++... ........+|+.++..+..|++ |++
T Consensus 45 ~~~~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~ 120 (382)
T 2vx3_A 45 IVKNGEKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK----KAFLNQAQIEVRLLELMNKHDTEMKYYIVH 120 (382)
T ss_dssp CCCTTCEETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSS----HHHHHHHHHHHHHHHHHHHCSSGGGGGBCC
T ss_pred EeecCCEeeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEecc----HHHHHHHHHHHHHHHHHHhcccccceeEEE
Confidence 3456677889999999999999999999999999999999998643 2345567788888888865664 999
Q ss_pred EEEEEEeCCeEEEEEeccCCCchHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHH--HcCCeeccCCCCceeeeecCCCC
Q 042823 89 FKSTYEDETAVHVVMELCEGGDLFDRIIAK--GYNSERDAATVLRAIVNAVNVCH--SMGVMHRDLKPENFSFISRDDNA 164 (477)
Q Consensus 89 ~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~--~~~~~~~~~~i~~qil~~L~~lH--~~~ivH~dlkp~Nil~~~~~~~~ 164 (477)
+++++...+.+|+||||++| +|.+++... +.+++..++.++.|++.||.||| +.||+||||||+|||+.. +..+
T Consensus 121 ~~~~~~~~~~~~lv~e~~~~-~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~~~ivHrDlkp~NIll~~-~~~~ 198 (382)
T 2vx3_A 121 LKRHFMFRNHLCLVFEMLSY-NLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCN-PKRS 198 (382)
T ss_dssp EEEEEEETTEEEEEEECCCC-BHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTSTTTCEECCCCSGGGEEESS-TTSC
T ss_pred eeeeeccCCceEEEEecCCC-CHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccCCCCEEcCCCCcccEEEec-CCCC
Confidence 99999999999999999965 999999875 45899999999999999999999 579999999999999832 2467
Q ss_pred CEEEeecCCccccCCCcceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCcc
Q 042823 165 LLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEID 243 (477)
Q Consensus 165 ~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~ 243 (477)
.+||+|||++...... .....||+.|+|||++.+ .++.++|||||||++|+|+||.+||.+.+....+..+......
T Consensus 199 ~~kL~DFG~a~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~ 276 (382)
T 2vx3_A 199 AIKIVDFGSSCQLGQR--IYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGI 276 (382)
T ss_dssp CEEECCCTTCEETTCC--CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCS
T ss_pred cEEEEeccCceecccc--cccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCC
Confidence 8999999999876432 345689999999999875 6899999999999999999999999988877766665542110
Q ss_pred CC------------------CCCC-----------------CC-------------------------CCHHHHHHHHHh
Q 042823 244 FD------------------TDPW-----------------PS-------------------------ISSTAKDLVRRM 263 (477)
Q Consensus 244 ~~------------------~~~~-----------------~~-------------------------~~~~~~~li~~~ 263 (477)
.+ ...| .. .++++++||.+|
T Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~m 356 (382)
T 2vx3_A 277 PPAHILDQAPKARKFFEKLPDGTWNLKKTKDGKREYKPPGTRKLHNILGVETGGPGGRRAGESGHTVADYLKFKDLILRM 356 (382)
T ss_dssp CCHHHHTTCTTHHHHEEECTTSCEEECCCCTTCCCSCCTTCSCHHHHHTTTTTSGGGTTTTCTTCCHHHHHHHHHHHHHH
T ss_pred CCHHHHHhhHHHHHHHHhccccccccccccccccccCCcchhhHHHHhhccccCCCccccccccccchhhHHHHHHHHHh
Confidence 00 0000 00 014789999999
Q ss_pred cccCccccCCHHHHhcCcccCcC
Q 042823 264 LTKDPKRRITAAQVLEHPWLRES 286 (477)
Q Consensus 264 l~~dp~~R~s~~~~l~h~~~~~~ 286 (477)
|+.||++|||+.++|+||||+..
T Consensus 357 L~~dP~~Rpta~e~L~hp~f~~~ 379 (382)
T 2vx3_A 357 LDYDPKTRIQPYYALQHSFFKKT 379 (382)
T ss_dssp TCSCTTTSCCHHHHTTSGGGCC-
T ss_pred cCCChhhCCCHHHHhcCcccccC
Confidence 99999999999999999999864
|
| >2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.2e-48 Score=369.02 Aligned_cols=259 Identities=25% Similarity=0.446 Sum_probs=218.2
Q ss_pred cccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCcc-chhhHHHHHHHHHHHHhccCCCCeeEEEEEE--EeC
Q 042823 20 DVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKM-RLAENDMIRREIQIRLYLSGQPNVVEFKSTY--EDE 96 (477)
Q Consensus 20 ~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~--~~~ 96 (477)
.+.++|++++.||+|+||.||+|.+..+++.||+|++...... .......+.+|+.++..+ +||||+++++++ .+.
T Consensus 2 ~l~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~ 80 (305)
T 2wtk_C 2 KLIGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRL-RHKNVIQLVDVLYNEEK 80 (305)
T ss_dssp ---CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTC-CCTTBCCEEEEEECC--
T ss_pred ccccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhc-CCCCeeEEEEEEEcCCC
Confidence 3568999999999999999999999999999999998654211 123456788999999999 799999999998 455
Q ss_pred CeEEEEEeccCCCchHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCc
Q 042823 97 TAVHVVMELCEGGDLFDRIIA--KGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSA 174 (477)
Q Consensus 97 ~~~~lv~e~~~gg~L~~~l~~--~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a 174 (477)
..+|+|||||+++ |.+++.. ...+++..+..++.||+.||.|||++||+||||||+||++ +.++.+||+|||++
T Consensus 81 ~~~~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~NIl~---~~~~~~kl~dfg~~ 156 (305)
T 2wtk_C 81 QKMYMVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLL---TTGGTLKISALGVA 156 (305)
T ss_dssp -CEEEEEECCSEE-HHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE---CTTCCEEECCCTTC
T ss_pred CeEEEEehhccCC-HHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEE---cCCCcEEeeccccc
Confidence 6899999999876 7777765 4568999999999999999999999999999999999999 77889999999999
Q ss_pred cccCC---Ccceecccccccccchhhhhh---hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCC
Q 042823 175 LLFEE---GQVYRDIVGSGFYIAPEVLRR---RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDP 248 (477)
Q Consensus 175 ~~~~~---~~~~~~~~gt~~y~aPE~~~~---~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~ 248 (477)
..... ........||+.|+|||++.+ .++.++|||||||++|+|++|..||.+.........+..+...++
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~--- 233 (305)
T 2wtk_C 157 EALHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENIGKGSYAIP--- 233 (305)
T ss_dssp EECCTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCCCCCC---
T ss_pred cccCccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHHHhcCCCCCC---
Confidence 86543 223345679999999999875 247799999999999999999999998888888777777655433
Q ss_pred CCCCCHHHHHHHHHhcccCccccCCHHHHhcCcccCcCC
Q 042823 249 WPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESG 287 (477)
Q Consensus 249 ~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~~ 287 (477)
..+++.+.+||.+||..||.+|||+.++++||||+...
T Consensus 234 -~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~~~~~~~~ 271 (305)
T 2wtk_C 234 -GDCGPPLSDLLKGMLEYEPAKRFSIRQIRQHSWFRKKH 271 (305)
T ss_dssp -SSSCHHHHHHHHHHTCSSTTTSCCHHHHHHSHHHHSCC
T ss_pred -CccCHHHHHHHHHHccCChhhCCCHHHHhcCcccccCC
Confidence 36789999999999999999999999999999997654
|
| >1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-47 Score=370.78 Aligned_cols=265 Identities=25% Similarity=0.369 Sum_probs=218.5
Q ss_pred cccccccccccccccCCeEEEEEEEc-cCCceEEEEEeecCCccchhhHHHHHHHHHHHHhcc--CCCCeeEEEEEEE--
Q 042823 20 DVMLHYFFGRMLGRGQFGVSYLCTEN-STNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLS--GQPNVVEFKSTYE-- 94 (477)
Q Consensus 20 ~~~~~Y~~~~~iG~G~~g~V~~~~~~-~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~--~hpniv~~~~~~~-- 94 (477)
...++|++.+.||+|+||.||+|.+. .+++.||+|++....... .....+.+|+.+++.+. +||||+++++++.
T Consensus 8 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~ 86 (326)
T 1blx_A 8 RADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEE-GMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVS 86 (326)
T ss_dssp CGGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTT-SCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEE
T ss_pred CchhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccc-cCCchhhHHHHHHHhhhccCCCCeEeeeeeeeec
Confidence 45578999999999999999999995 678999999986543211 11223556777766664 7999999999987
Q ss_pred ---eCCeEEEEEeccCCCchHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEe
Q 042823 95 ---DETAVHVVMELCEGGDLFDRIIAKG--YNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVT 169 (477)
Q Consensus 95 ---~~~~~~lv~e~~~gg~L~~~l~~~~--~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~ 169 (477)
....+++||||+. |+|.+++.... .+++..++.++.||+.||.|||++||+||||||+||++ +.++.+||+
T Consensus 87 ~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~gi~H~dlkp~Nili---~~~~~~kl~ 162 (326)
T 1blx_A 87 RTDRETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILV---TSSGQIKLA 162 (326)
T ss_dssp ECSSEEEEEEEEECCS-CBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE---CTTCCEEEC
T ss_pred ccCCCceEEEEEecCC-CCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHHHeEE---cCCCCEEEe
Confidence 5678999999998 59999998754 48999999999999999999999999999999999999 778899999
Q ss_pred ecCCccccCCCcceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCc-----c
Q 042823 170 DFGSALLFEEGQVYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEI-----D 243 (477)
Q Consensus 170 Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~-----~ 243 (477)
|||++.............||+.|+|||++.+ .++.++|||||||++|+|++|.+||.+.........+..... .
T Consensus 163 Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~ 242 (326)
T 1blx_A 163 DFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEED 242 (326)
T ss_dssp SCCSCCCCCGGGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGG
T ss_pred cCcccccccCCCCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCccc
Confidence 9999987655444556789999999999864 689999999999999999999999998887777666653210 0
Q ss_pred CC------------------CCCCCCCCHHHHHHHHHhcccCccccCCHHHHhcCcccCcCCCC
Q 042823 244 FD------------------TDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEA 289 (477)
Q Consensus 244 ~~------------------~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~~~~ 289 (477)
++ ...++.+++.+++||.+||+.||++|||+.++++||||+.....
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~~~~~ 306 (326)
T 1blx_A 243 WPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQDLERC 306 (326)
T ss_dssp SCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGTTCCCC
T ss_pred CccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhcCccccccchh
Confidence 00 01234689999999999999999999999999999999876543
|
| >1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-47 Score=367.65 Aligned_cols=255 Identities=27% Similarity=0.465 Sum_probs=210.9
Q ss_pred ccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEe-----
Q 042823 21 VMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYED----- 95 (477)
Q Consensus 21 ~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~----- 95 (477)
+.++|++++.||+|+||.||+|.+..+++.||+|++... ......+.+|+.++..+ +||||+++++++.+
T Consensus 4 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~ 78 (303)
T 1zy4_A 4 YASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT----EEKLSTILSEVMLLASL-NHQYVVRYYAAWLERRNFV 78 (303)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE----HHHHHHHHHHHHHHTTC-CCTTBCCEEEEEEECCCCC
T ss_pred ccccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc----HHHHHHHHHHHHHHHhc-CchHHHHHHHHHHhhcchh
Confidence 567899999999999999999999999999999998542 23456788999999999 79999999998865
Q ss_pred --------CCeEEEEEeccCCCchHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCE
Q 042823 96 --------ETAVHVVMELCEGGDLFDRIIAKG-YNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALL 166 (477)
Q Consensus 96 --------~~~~~lv~e~~~gg~L~~~l~~~~-~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~ 166 (477)
...+|+|||||+||+|.+++.... .+++..++.++.|++.||.|||++||+||||||+||++ +.++.+
T Consensus 79 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dlkp~Nil~---~~~~~~ 155 (303)
T 1zy4_A 79 KPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFI---DESRNV 155 (303)
T ss_dssp C------CEEEEEEEEECCCSCBHHHHHHHSCGGGCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE---CTTSCE
T ss_pred hhhcccccCCceEEEEecCCCCCHHHhhhccccccchHHHHHHHHHHHHHHHHHHhCCeecccCCHHhEEE---cCCCCE
Confidence 467899999999999999998654 57889999999999999999999999999999999999 778899
Q ss_pred EEeecCCccccCCC---------------cceecccccccccchhhhhh--hcCCccchHhHHHHHHHHhhCCCCCCCC-
Q 042823 167 KVTDFGSALLFEEG---------------QVYRDIVGSGFYIAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPFWAE- 228 (477)
Q Consensus 167 kl~Dfg~a~~~~~~---------------~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~l~tg~~pf~~~- 228 (477)
||+|||++...... .......||+.|+|||++.+ .++.++|||||||++|+|++ ||...
T Consensus 156 kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~~ 232 (303)
T 1zy4_A 156 KIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGM 232 (303)
T ss_dssp EECCCCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSHH
T ss_pred EEeeCcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCch
Confidence 99999998765421 12234578999999999874 58999999999999999998 55432
Q ss_pred ChhhHHHHHHcCCccCCCCCCCCCCHHHHHHHHHhcccCccccCCHHHHhcCcccCcC
Q 042823 229 TKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRES 286 (477)
Q Consensus 229 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~ 286 (477)
........+......++....+..++.++++|.+||+.||.+|||+.++++||||+..
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~~~~~ 290 (303)
T 1zy4_A 233 ERVNILKKLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSGWLPVK 290 (303)
T ss_dssp HHHHHHHHHHSTTCCCCTTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHHSSCSCCC
T ss_pred hHHHHHHhccccccccCccccccchHHHHHHHHHHHhcCcccCcCHHHHhCCCCcCCC
Confidence 3334455566655555555556778899999999999999999999999999999754
|
| >2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-48 Score=381.05 Aligned_cols=264 Identities=24% Similarity=0.443 Sum_probs=224.6
Q ss_pred cccccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchh--------------hHHHHHHHHHHHHhcc
Q 042823 16 KAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLA--------------ENDMIRREIQIRLYLS 81 (477)
Q Consensus 16 ~~~~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~--------------~~~~~~~e~~~~~~l~ 81 (477)
.....+.++|++++.||+|+||.||+|.+ +++.||+|++......... ....+.+|+.++..+
T Consensus 24 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l- 100 (348)
T 2pml_X 24 KEKDKYINDYRIIRTLNQGKFNKIILCEK--DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDI- 100 (348)
T ss_dssp SSSCEEETTEEEEEEEECCSSCCEEEEEE--TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTC-
T ss_pred hhcccccCceEEEEEEcCCCCeEEEEEEc--CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhC-
Confidence 34456678999999999999999999998 8999999998654221111 126788999999999
Q ss_pred CCCCeeEEEEEEEeCCeEEEEEeccCCCchHHH------HHH--cCCCCHHHHHHHHHHHHHHHHHHHH-cCCeeccCCC
Q 042823 82 GQPNVVEFKSTYEDETAVHVVMELCEGGDLFDR------IIA--KGYNSERDAATVLRAIVNAVNVCHS-MGVMHRDLKP 152 (477)
Q Consensus 82 ~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~------l~~--~~~~~~~~~~~i~~qil~~L~~lH~-~~ivH~dlkp 152 (477)
+||||+++++++.+.+.+|+||||++||+|.++ +.. ...+++..++.++.|++.||.|||+ +||+||||||
T Consensus 101 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dl~p 180 (348)
T 2pml_X 101 KNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKP 180 (348)
T ss_dssp CCTTBCCCSEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTSCEECCCCCG
T ss_pred CCCCcceEEEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhccCCEeecCCCh
Confidence 699999999999999999999999999999988 655 5678999999999999999999999 9999999999
Q ss_pred CceeeeecCCCCCEEEeecCCccccCCCcceecccccccccchhhhhhh--cCC-ccchHhHHHHHHHHhhCCCCCCCCC
Q 042823 153 ENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLRRR--YGK-EIDIWSAGVILYILLSGVPPFWAET 229 (477)
Q Consensus 153 ~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~-~~DiwslG~il~~l~tg~~pf~~~~ 229 (477)
+||++ +.++.+||+|||.+...... ......||+.|+|||++.+. ++. ++|||||||++|+|++|..||....
T Consensus 181 ~Nil~---~~~~~~kl~dfg~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~ 256 (348)
T 2pml_X 181 SNILM---DKNGRVKLSDFGESEYMVDK-KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKI 256 (348)
T ss_dssp GGEEE---CTTSCEEECCCTTCEECBTT-EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred HhEEE---cCCCcEEEeccccccccccc-cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 99999 77889999999999876443 34556899999999998754 555 9999999999999999999998877
Q ss_pred h-hhHHHHHHcCCccCCCCC---------------CCCCCHHHHHHHHHhcccCccccCCHHHHhcCcccCcC
Q 042823 230 K-KGTYDAILQGEIDFDTDP---------------WPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRES 286 (477)
Q Consensus 230 ~-~~~~~~i~~~~~~~~~~~---------------~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~ 286 (477)
. ......+..+...++... .+.+++.+.+||.+||+.||.+|||+.++++||||+..
T Consensus 257 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~hp~f~~~ 329 (348)
T 2pml_X 257 SLVELFNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKHEWLADT 329 (348)
T ss_dssp CSHHHHHHHTSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGTTC
T ss_pred cHHHHHHHHhccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhcCccccCC
Confidence 6 666777776655444211 14689999999999999999999999999999999864
|
| >2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-47 Score=371.96 Aligned_cols=264 Identities=29% Similarity=0.430 Sum_probs=217.4
Q ss_pred ccccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeC
Q 042823 17 AYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDE 96 (477)
Q Consensus 17 ~~~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~ 96 (477)
....+.++|++.+.||+|+||.||+|.+..+|+.||+|++... ........+.+|+.++..+ +||||+++++++...
T Consensus 5 ~~~~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~ 81 (353)
T 2b9h_A 5 IVYNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPF--DKPLFALRTLREIKILKHF-KHENIITIFNIQRPD 81 (353)
T ss_dssp CCCCSCTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCC--SSHHHHHHHHHHHHHHHHC-CCTTBCCEEEECCCS
T ss_pred cccccccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeeccc--ccchHHHHHHHHHHHHHhC-cCCCcCCeeeeeccc
Confidence 4456788999999999999999999999999999999998543 2334456778999999999 799999999988654
Q ss_pred -----CeEEEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeec
Q 042823 97 -----TAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDF 171 (477)
Q Consensus 97 -----~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Df 171 (477)
...|+||||+. |+|.+++.. +.+++..+..++.|++.||.|||++||+||||||+||++ +.++.+||+||
T Consensus 82 ~~~~~~~~~lv~e~~~-~~L~~~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~Nil~---~~~~~~kl~Df 156 (353)
T 2b9h_A 82 SFENFNEVYIIQELMQ-TDLHRVIST-QMLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLI---NSNCDLKVCDF 156 (353)
T ss_dssp CSTTCCCEEEEECCCS-EEHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEE---CTTCCEEECCC
T ss_pred ccCccceEEEEEeccC-ccHHHHHhh-cCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEE---cCCCcEEEEec
Confidence 67999999997 599888876 568999999999999999999999999999999999999 77889999999
Q ss_pred CCccccCCCcc-----------eecccccccccchhhhh--hhcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHH
Q 042823 172 GSALLFEEGQV-----------YRDIVGSGFYIAPEVLR--RRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAIL 238 (477)
Q Consensus 172 g~a~~~~~~~~-----------~~~~~gt~~y~aPE~~~--~~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~ 238 (477)
|++........ .....||+.|+|||++. ..++.++|||||||++|+|++|.+||.+.+.......+.
T Consensus 157 g~a~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~ 236 (353)
T 2b9h_A 157 GLARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIF 236 (353)
T ss_dssp TTCEECC----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHH
T ss_pred ccccccccccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHH
Confidence 99986543211 22357899999999875 458899999999999999999999998877655544432
Q ss_pred cCC------------------------ccCCCC----CCCCCCHHHHHHHHHhcccCccccCCHHHHhcCcccCcCCC
Q 042823 239 QGE------------------------IDFDTD----PWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGE 288 (477)
Q Consensus 239 ~~~------------------------~~~~~~----~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~~~ 288 (477)
... ...+.. .++.+++++.+||.+||+.||++|||+.++++||||+....
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~ 314 (353)
T 2b9h_A 237 GIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYLQTYHD 314 (353)
T ss_dssp HHHCCCCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTTCC
T ss_pred HHhCCCchhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhcCccccccCC
Confidence 210 000000 12468999999999999999999999999999999986543
|
| >2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-47 Score=362.70 Aligned_cols=259 Identities=29% Similarity=0.469 Sum_probs=221.3
Q ss_pred ccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEE--eCCe
Q 042823 21 VMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYE--DETA 98 (477)
Q Consensus 21 ~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~--~~~~ 98 (477)
..++|++.+.||+|+||.||+|.++.+++.||+|++..... .......+.+|+.++.++ +||||+++++++. ....
T Consensus 4 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~ 81 (279)
T 2w5a_A 4 RAEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSM-TEAEKQMLVSEVNLLREL-KHPNIVRYYDRIIDRTNTT 81 (279)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTC-CHHHHHHHHHHHHHHHHC-CCTTBCCEEEEEEEGGGTE
T ss_pred chhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccC-CHHHHHHHHHHHHHHHhc-CCCCCCeEEEEEecCCCce
Confidence 35689999999999999999999999999999999975432 334567788999999999 7999999999885 4678
Q ss_pred EEEEEeccCCCchHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHcC-----CeeccCCCCceeeeecCCCCCEEEe
Q 042823 99 VHVVMELCEGGDLFDRIIAK----GYNSERDAATVLRAIVNAVNVCHSMG-----VMHRDLKPENFSFISRDDNALLKVT 169 (477)
Q Consensus 99 ~~lv~e~~~gg~L~~~l~~~----~~~~~~~~~~i~~qil~~L~~lH~~~-----ivH~dlkp~Nil~~~~~~~~~~kl~ 169 (477)
+|+||||++||+|.+++... ..+++..++.++.|++.||.|||++| |+||||||+||++ +.++.+||+
T Consensus 82 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~---~~~~~~kl~ 158 (279)
T 2w5a_A 82 LYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFL---DGKQNVKLG 158 (279)
T ss_dssp EEEEEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEE---CSSSCEEEC
T ss_pred EEEEEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEE---cCCCCEEEe
Confidence 99999999999999999763 34899999999999999999999999 9999999999999 778899999
Q ss_pred ecCCccccCCCc-ceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCC
Q 042823 170 DFGSALLFEEGQ-VYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTD 247 (477)
Q Consensus 170 Dfg~a~~~~~~~-~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~ 247 (477)
|||++....... ......||+.|+|||++.+ .++.++||||||+++|+|++|..||...........+..+....
T Consensus 159 dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~i~~~~~~~--- 235 (279)
T 2w5a_A 159 DFGLARILNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRR--- 235 (279)
T ss_dssp CCCHHHHC---CHHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCC---
T ss_pred cCchheeeccccccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCHHHHHHHHhhccccc---
Confidence 999987664432 2234578999999999875 58899999999999999999999999888777777777665432
Q ss_pred CCCCCCHHHHHHHHHhcccCccccCCHHHHhcCcccCcCC
Q 042823 248 PWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESG 287 (477)
Q Consensus 248 ~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~~ 287 (477)
....+++++.++|.+||+.||.+|||+.++++|+|+....
T Consensus 236 ~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~~~~~~ 275 (279)
T 2w5a_A 236 IPYRYSDELNEIITRMLNLKDYHRPSVEEILENPLILEHH 275 (279)
T ss_dssp CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTTCCGGG
T ss_pred CCcccCHHHHHHHHHHcCCCcccCCCHHHHHhChhhhhhc
Confidence 1236899999999999999999999999999999998754
|
| >2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-47 Score=373.91 Aligned_cols=254 Identities=19% Similarity=0.285 Sum_probs=217.0
Q ss_pred ccccccccccccccccCCeEEEEEEEc-------cCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEE
Q 042823 19 EDVMLHYFFGRMLGRGQFGVSYLCTEN-------STNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKS 91 (477)
Q Consensus 19 ~~~~~~Y~~~~~iG~G~~g~V~~~~~~-------~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~ 91 (477)
+...++|.+++.||+|+||.||+|.+. .++..||+|++.... .......+.+|+.++..+.+||||+++++
T Consensus 77 ~~~~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~hpnIv~~~~ 154 (370)
T 2psq_A 77 EFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDA--TEKDLSDLVSEMEMMKMIGKHKNIINLLG 154 (370)
T ss_dssp BCCGGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTC--BHHHHHHHHHHHHHHHHSCCCTTBCCEEE
T ss_pred cccHHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCc--CHHHHHHHHHHHHHHHHhcCCCCEeeEEE
Confidence 345678999999999999999999874 345679999986542 33456678999999999977999999999
Q ss_pred EEEeCCeEEEEEeccCCCchHHHHHHcC----------------CCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCce
Q 042823 92 TYEDETAVHVVMELCEGGDLFDRIIAKG----------------YNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENF 155 (477)
Q Consensus 92 ~~~~~~~~~lv~e~~~gg~L~~~l~~~~----------------~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Ni 155 (477)
++...+.+|+|||||+||+|.+++.... .++..++..++.||+.||.|||++||+||||||+||
T Consensus 155 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NI 234 (370)
T 2psq_A 155 ACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNV 234 (370)
T ss_dssp EECSSSSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGE
T ss_pred EEccCCCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchhhE
Confidence 9999999999999999999999998753 478999999999999999999999999999999999
Q ss_pred eeeecCCCCCEEEeecCCccccCCCcc---eecccccccccchhhhhh-hcCCccchHhHHHHHHHHhh-CCCCCCCCCh
Q 042823 156 SFISRDDNALLKVTDFGSALLFEEGQV---YRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLS-GVPPFWAETK 230 (477)
Q Consensus 156 l~~~~~~~~~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~t-g~~pf~~~~~ 230 (477)
++ +.++.+||+|||++........ .....+|+.|+|||++.+ .++.++|||||||++|+|+| |..||.+...
T Consensus 235 ll---~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~ 311 (370)
T 2psq_A 235 LV---TENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPV 311 (370)
T ss_dssp EE---CTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCG
T ss_pred EE---CCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCH
Confidence 99 7788999999999986543321 233467889999999865 58999999999999999999 9999998888
Q ss_pred hhHHHHHHcCCccCCCCCCCCCCHHHHHHHHHhcccCccccCCHHHHhcC
Q 042823 231 KGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEH 280 (477)
Q Consensus 231 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h 280 (477)
......+..+... .....+++++.++|.+||+.||.+|||+.+++++
T Consensus 312 ~~~~~~~~~~~~~---~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~ 358 (370)
T 2psq_A 312 EELFKLLKEGHRM---DKPANCTNELYMMMRDCWHAVPSQRPTFKQLVED 358 (370)
T ss_dssp GGHHHHHHTTCCC---CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHHHHhcCCCC---CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 8887777665432 1224689999999999999999999999999863
|
| >3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-47 Score=376.77 Aligned_cols=264 Identities=22% Similarity=0.300 Sum_probs=219.3
Q ss_pred CCCccccccccccccccccccccccCCeEEEEEE-----EccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCC
Q 042823 10 RDPILGKAYEDVMLHYFFGRMLGRGQFGVSYLCT-----ENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQP 84 (477)
Q Consensus 10 ~~~~~~~~~~~~~~~Y~~~~~iG~G~~g~V~~~~-----~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hp 84 (477)
+-|.....++...++|++++.||+|+||.||+|. +..+++.||+|++.... .......+.+|+.++.++.+||
T Consensus 9 ~~~~~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~hp 86 (359)
T 3vhe_A 9 RLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA--THSEHRALMSELKILIHIGHHL 86 (359)
T ss_dssp GSCCCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC--CHHHHHHHHHHHHHHHHHCCCT
T ss_pred hCCCCcccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcC--CHHHHHHHHHHHHHHHhhcCCc
Confidence 4455667778889999999999999999999998 55677899999996542 2344567899999999998899
Q ss_pred CeeEEEEEEEeCC-eEEEEEeccCCCchHHHHHHcCC-------------------------------------------
Q 042823 85 NVVEFKSTYEDET-AVHVVMELCEGGDLFDRIIAKGY------------------------------------------- 120 (477)
Q Consensus 85 niv~~~~~~~~~~-~~~lv~e~~~gg~L~~~l~~~~~------------------------------------------- 120 (477)
||+++++++...+ .+++|||||+||+|.+++.....
T Consensus 87 niv~~~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (359)
T 3vhe_A 87 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSG 166 (359)
T ss_dssp TBCCEEEEECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC-------------------------------------
T ss_pred ceeeeeeeeecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccc
Confidence 9999999998755 49999999999999999986543
Q ss_pred -----------------------CCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCcccc
Q 042823 121 -----------------------NSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLF 177 (477)
Q Consensus 121 -----------------------~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~ 177 (477)
+++..+..++.||+.||.|||++||+||||||+||++ +.++.+||+|||++...
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~~ivH~Dikp~NIll---~~~~~~kl~Dfg~a~~~ 243 (359)
T 3vhe_A 167 FVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILL---SEKNVVKICDFGLARDI 243 (359)
T ss_dssp -----------------CTTTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE---CGGGCEEECCCGGGSCT
T ss_pred cccccccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEE---cCCCcEEEEeccceeee
Confidence 8999999999999999999999999999999999999 67788999999999865
Q ss_pred CCCc---ceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhh-CCCCCCCCChhhHHHHHHcCCccCCCCCCCCC
Q 042823 178 EEGQ---VYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQGEIDFDTDPWPSI 252 (477)
Q Consensus 178 ~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~t-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 252 (477)
.... ......||+.|+|||++.+ .++.++|||||||++|+|+| |.+||.+.................. ....+
T Consensus 244 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~ 321 (359)
T 3vhe_A 244 YKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMR--APDYT 321 (359)
T ss_dssp TSCTTCEEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHHTCCCC--CCTTC
T ss_pred cccccchhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHHHHHHHHcCCCCC--CCCCC
Confidence 4332 2234568899999999864 68999999999999999998 9999988765544444333322222 22468
Q ss_pred CHHHHHHHHHhcccCccccCCHHHHhcC
Q 042823 253 SSTAKDLVRRMLTKDPKRRITAAQVLEH 280 (477)
Q Consensus 253 ~~~~~~li~~~l~~dp~~R~s~~~~l~h 280 (477)
++++.++|.+||+.||.+|||+.++++|
T Consensus 322 ~~~l~~li~~~l~~dP~~Rps~~ell~~ 349 (359)
T 3vhe_A 322 TPEMYQTMLDCWHGEPSQRPTFSELVEH 349 (359)
T ss_dssp CHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred CHHHHHHHHHHccCChhhCCCHHHHHHH
Confidence 9999999999999999999999999876
|
| >3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-47 Score=369.14 Aligned_cols=265 Identities=20% Similarity=0.275 Sum_probs=202.0
Q ss_pred cccccccccccccccccccCCeEEEEEEEccCCc---eEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEE
Q 042823 16 KAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNR---PYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKST 92 (477)
Q Consensus 16 ~~~~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~---~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~ 92 (477)
+......++|++++.||+|+||.||+|.+..++. .||+|++..... .......+.+|+.++..+ +||||++++++
T Consensus 16 ~~~~i~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~ 93 (323)
T 3qup_A 16 EDVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADII-ASSDIEEFLREAACMKEF-DHPHVAKLVGV 93 (323)
T ss_dssp CTTBCC---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC-------CHHHHHHHHHHHHHTTC-CCTTBCCCCEE
T ss_pred hhcccChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEeccccc-CHHHHHHHHHHHHHHHHC-CCCceehhhce
Confidence 4455667789999999999999999999887765 899999865432 224467788999999999 79999999999
Q ss_pred EEeCCeE------EEEEeccCCCchHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeec
Q 042823 93 YEDETAV------HVVMELCEGGDLFDRIIAKG------YNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISR 160 (477)
Q Consensus 93 ~~~~~~~------~lv~e~~~gg~L~~~l~~~~------~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~ 160 (477)
+...... ++||||+.||+|.+++.... .+++..+..++.||+.||.|||++||+||||||+||++
T Consensus 94 ~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivH~Dikp~NIli--- 170 (323)
T 3qup_A 94 SLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRNFIHRDLAARNCML--- 170 (323)
T ss_dssp EECC-------CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE---
T ss_pred eeccccccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcCCcccCCCCcceEEE---
Confidence 9877665 99999999999999997543 58999999999999999999999999999999999999
Q ss_pred CCCCCEEEeecCCccccCCCcc---eecccccccccchhhhhh-hcCCccchHhHHHHHHHHhh-CCCCCCCCChhhHHH
Q 042823 161 DDNALLKVTDFGSALLFEEGQV---YRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYD 235 (477)
Q Consensus 161 ~~~~~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~t-g~~pf~~~~~~~~~~ 235 (477)
+.++.+||+|||++........ .....+|+.|+|||++.+ .++.++|||||||++|+|++ |.+||.+........
T Consensus 171 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~ 250 (323)
T 3qup_A 171 AEDMTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYN 250 (323)
T ss_dssp CTTSCEEECCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHH
T ss_pred cCCCCEEEeeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChHHHHH
Confidence 7778999999999976644322 223456788999999875 58999999999999999999 999999988888888
Q ss_pred HHHcCCccCCCCCCCCCCHHHHHHHHHhcccCccccCC-------HHHHhcCcccCcCCC
Q 042823 236 AILQGEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRIT-------AAQVLEHPWLRESGE 288 (477)
Q Consensus 236 ~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s-------~~~~l~h~~~~~~~~ 288 (477)
.+..+.... ..+.+++.+.+||.+||+.||++||| .+++++|||+.....
T Consensus 251 ~~~~~~~~~---~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~~~~~~~~~ 307 (323)
T 3qup_A 251 YLIGGNRLK---QPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGHLSVLSTSQ 307 (323)
T ss_dssp HHHTTCCCC---CCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC--------
T ss_pred HHhcCCCCC---CCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHhhhcCCCC
Confidence 777664322 22578999999999999999999999 788899999976543
|
| >3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-47 Score=375.16 Aligned_cols=262 Identities=27% Similarity=0.394 Sum_probs=203.9
Q ss_pred cccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCC
Q 042823 18 YEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDET 97 (477)
Q Consensus 18 ~~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~ 97 (477)
.....++|++.+.||+|+||.||+|.++.+++.||+|++....... ....++++.+..+ +||||+++++++....
T Consensus 18 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~----~~~~~~~~~l~~l-~h~niv~~~~~~~~~~ 92 (360)
T 3e3p_A 18 SRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFR----NRELQIMQDLAVL-HHPNIVQLQSYFYTLG 92 (360)
T ss_dssp HHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCTTCC----CHHHHHHHHHHHH-CCTTBCCEEEEEEEEC
T ss_pred chhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCcccc----HHHHHHHHHHHhc-CCCCcccHHHhhhccc
Confidence 3455678999999999999999999999999999999986543322 2345566677777 7999999999996543
Q ss_pred e-------EEEEEeccCCCchHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHH--HcCCeeccCCCCceeeeecCC-C
Q 042823 98 A-------VHVVMELCEGGDLFDRII----AKGYNSERDAATVLRAIVNAVNVCH--SMGVMHRDLKPENFSFISRDD-N 163 (477)
Q Consensus 98 ~-------~~lv~e~~~gg~L~~~l~----~~~~~~~~~~~~i~~qil~~L~~lH--~~~ivH~dlkp~Nil~~~~~~-~ 163 (477)
. +++||||++| +|.+.+. ....+++..+..++.|++.||.||| ++||+||||||+||++ +. +
T Consensus 93 ~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~ivH~Dlkp~NIll---~~~~ 168 (360)
T 3e3p_A 93 ERDRRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLV---NEAD 168 (360)
T ss_dssp SSCTTCEEEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTTCCBCSCCCGGGEEE---ETTT
T ss_pred cccccceeEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCCCeecCcCCHHHEEE---eCCC
Confidence 3 8999999987 5544443 4567899999999999999999999 9999999999999999 43 6
Q ss_pred CCEEEeecCCccccCCCcceecccccccccchhhhhh--hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCC
Q 042823 164 ALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGE 241 (477)
Q Consensus 164 ~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~ 241 (477)
+.+||+|||++.............||+.|+|||++.+ .++.++|||||||++|+|++|.+||.+.+....+..+.+..
T Consensus 169 ~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~~ 248 (360)
T 3e3p_A 169 GTLKLCDFGSAKKLSPSEPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVL 248 (360)
T ss_dssp TEEEECCCTTCBCCCTTSCCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHH
T ss_pred CcEEEeeCCCceecCCCCCcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHHHHHHHHHc
Confidence 7899999999988766655566789999999999854 48999999999999999999999999888777666655321
Q ss_pred ccC--------------------C--------CCCCCCCCHHHHHHHHHhcccCccccCCHHHHhcCcccCcCCC
Q 042823 242 IDF--------------------D--------TDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGE 288 (477)
Q Consensus 242 ~~~--------------------~--------~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~~~ 288 (477)
... . .......++++.+||.+||+.||.+|||+.++|+||||+....
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~~ 323 (360)
T 3e3p_A 249 GCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCHPYFDELHD 323 (360)
T ss_dssp CCCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTSGGGGGGGC
T ss_pred CCCCHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcCccccccCC
Confidence 000 0 0111235789999999999999999999999999999987643
|
| >3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-47 Score=376.32 Aligned_cols=260 Identities=19% Similarity=0.205 Sum_probs=219.0
Q ss_pred ccccccccccccccccCCeEEEEEE-----EccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEE
Q 042823 19 EDVMLHYFFGRMLGRGQFGVSYLCT-----ENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTY 93 (477)
Q Consensus 19 ~~~~~~Y~~~~~iG~G~~g~V~~~~-----~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~ 93 (477)
+...++|++++.||+|+||+||+|. +..+++.||+|++.... .......+.+|+.++..+ +||||+++++++
T Consensus 67 ~~~~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l-~hpnIv~~~~~~ 143 (367)
T 3l9p_A 67 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVC--SEQDELDFLMEALIISKF-NHQNIVRCIGVS 143 (367)
T ss_dssp BCCGGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSC--CHHHHHHHHHHHHHHHHC-CCTTBCCEEEEE
T ss_pred hcCHhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEeccccc--ChhhHHHHHHHHHHHHhC-CCCCCCeEEEEE
Confidence 4556889999999999999999999 45678899999986432 234455788899999999 799999999999
Q ss_pred EeCCeEEEEEeccCCCchHHHHHHcC-------CCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCE
Q 042823 94 EDETAVHVVMELCEGGDLFDRIIAKG-------YNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALL 166 (477)
Q Consensus 94 ~~~~~~~lv~e~~~gg~L~~~l~~~~-------~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~ 166 (477)
......|+|||||+||+|.+++.... .+++.++..++.||+.||.|||++||+||||||+|||+...+....+
T Consensus 144 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~~~~ 223 (367)
T 3l9p_A 144 LQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVA 223 (367)
T ss_dssp CSSSSCEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCE
T ss_pred ecCCCCEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEEecCCCCceE
Confidence 99999999999999999999998753 58999999999999999999999999999999999999544456679
Q ss_pred EEeecCCccccCC---Ccceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhh-CCCCCCCCChhhHHHHHHcCC
Q 042823 167 KVTDFGSALLFEE---GQVYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQGE 241 (477)
Q Consensus 167 kl~Dfg~a~~~~~---~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~t-g~~pf~~~~~~~~~~~i~~~~ 241 (477)
||+|||++..... ........||+.|+|||++.+ .++.++|||||||++|+|++ |.+||...........+..+.
T Consensus 224 kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~~~~~~i~~~~ 303 (367)
T 3l9p_A 224 KIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGG 303 (367)
T ss_dssp EECCCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTC
T ss_pred EECCCccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC
Confidence 9999999975422 122234568999999999864 68999999999999999998 999999988888888777765
Q ss_pred ccCCCCCCCCCCHHHHHHHHHhcccCccccCCHHHHhcCcccC
Q 042823 242 IDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLR 284 (477)
Q Consensus 242 ~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~ 284 (477)
.... ...+++.+.+||.+||+.||.+|||+.++++|.+..
T Consensus 304 ~~~~---~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~ 343 (367)
T 3l9p_A 304 RMDP---PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYC 343 (367)
T ss_dssp CCCC---CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred CCCC---CccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHH
Confidence 3222 246899999999999999999999999999987653
|
| >2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-47 Score=370.10 Aligned_cols=265 Identities=27% Similarity=0.375 Sum_probs=213.2
Q ss_pred cccccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEE-
Q 042823 16 KAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYE- 94 (477)
Q Consensus 16 ~~~~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~- 94 (477)
-+...+.++|++.+.||+|+||.||+|.+..+++.||+|++... .......+.+|+.++..+ +||||+++++++.
T Consensus 4 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~ 79 (320)
T 2i6l_A 4 IHGFDLGSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLT---DPQSVKHALREIKIIRRL-DHDNIVKVFEILGP 79 (320)
T ss_dssp --CEEETTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECC---SHHHHHHHHHHHHHHHTC-CCTTBCCEEEEECT
T ss_pred cccCccCCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecC---ChHHHHHHHHHHHHHHhc-CCCCeeEEEEeccc
Confidence 35677889999999999999999999999999999999998644 234566788999999999 7999999999873
Q ss_pred -------------eCCeEEEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecC
Q 042823 95 -------------DETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRD 161 (477)
Q Consensus 95 -------------~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~ 161 (477)
....+|+||||++ |+|.+++.. +.+++..++.++.|++.||.|||++||+||||||+||++. .
T Consensus 80 ~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~--~ 155 (320)
T 2i6l_A 80 SGSQLTDDVGSLTELNSVYIVQEYME-TDLANVLEQ-GPLLEEHARLFMYQLLRGLKYIHSANVLHRDLKPANLFIN--T 155 (320)
T ss_dssp TSCBCCC----CCSCSEEEEEEECCS-EEHHHHHTT-CCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEE--T
T ss_pred cccccccccccccccCceeEEeeccC-CCHHHHhhc-CCccHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEc--C
Confidence 4478999999997 599888754 5689999999999999999999999999999999999982 2
Q ss_pred CCCCEEEeecCCccccCCC----cceecccccccccchhhhh--hhcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHH
Q 042823 162 DNALLKVTDFGSALLFEEG----QVYRDIVGSGFYIAPEVLR--RRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYD 235 (477)
Q Consensus 162 ~~~~~kl~Dfg~a~~~~~~----~~~~~~~gt~~y~aPE~~~--~~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~ 235 (477)
.++.+||+|||++...... .......+|+.|+|||++. ..++.++|||||||++|+|++|..||.+........
T Consensus 156 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~ 235 (320)
T 2i6l_A 156 EDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQ 235 (320)
T ss_dssp TTTEEEECCCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH
T ss_pred CCCeEEEccCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence 4568999999999865432 1223456799999999885 458899999999999999999999999887766665
Q ss_pred HHHcCCccC----------------------CCC----CCCCCCHHHHHHHHHhcccCccccCCHHHHhcCcccCcCCC
Q 042823 236 AILQGEIDF----------------------DTD----PWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGE 288 (477)
Q Consensus 236 ~i~~~~~~~----------------------~~~----~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~~~ 288 (477)
.+....... +.. .++.+|+++++||.+||+.||++|||+.++|+||||+....
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~ 314 (320)
T 2i6l_A 236 LILESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSHPYMSIYSF 314 (320)
T ss_dssp HHHHHSCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHTSHHHHTTCC
T ss_pred HHHHhcCCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhCCcccccccC
Confidence 554432110 000 12468999999999999999999999999999999986543
|
| >3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=9.2e-48 Score=371.21 Aligned_cols=261 Identities=32% Similarity=0.530 Sum_probs=216.0
Q ss_pred cccccccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccch---hhHHHHHHHHHHHHhcc-CCCCeeEE
Q 042823 14 LGKAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRL---AENDMIRREIQIRLYLS-GQPNVVEF 89 (477)
Q Consensus 14 ~~~~~~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~---~~~~~~~~e~~~~~~l~-~hpniv~~ 89 (477)
..+..+.+.++|++++.||+|+||.||+|.+..+++.||+|++........ .....+.+|+.++..+. .||||+++
T Consensus 34 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~ 113 (320)
T 3a99_A 34 PGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRL 113 (320)
T ss_dssp ------CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCE
T ss_pred cccccCCccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEE
Confidence 356777899999999999999999999999999999999999975432211 11234567888988886 37999999
Q ss_pred EEEEEeCCeEEEEEeccCC-CchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEE
Q 042823 90 KSTYEDETAVHVVMELCEG-GDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKV 168 (477)
Q Consensus 90 ~~~~~~~~~~~lv~e~~~g-g~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl 168 (477)
++++...+.+++|||++.+ ++|.+++...+.+++..++.++.||+.||.|||++||+||||||+||++. ...+.+||
T Consensus 114 ~~~~~~~~~~~lv~e~~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~--~~~~~~kL 191 (320)
T 3a99_A 114 LDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILID--LNRGELKL 191 (320)
T ss_dssp EEEEECSSEEEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEE--TTTTEEEE
T ss_pred EEEEecCCcEEEEEEcCCCCccHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCcEeCCCCHHHEEEe--CCCCCEEE
Confidence 9999999999999999986 89999999988999999999999999999999999999999999999992 25678999
Q ss_pred eecCCccccCCCcceecccccccccchhhhhh-h-cCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCC
Q 042823 169 TDFGSALLFEEGQVYRDIVGSGFYIAPEVLRR-R-YGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDT 246 (477)
Q Consensus 169 ~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~-~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~ 246 (477)
+|||++...... ......||+.|+|||++.+ . ++.++|||||||++|+|++|..||.... .+..+...+
T Consensus 192 ~Dfg~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~------~~~~~~~~~-- 262 (320)
T 3a99_A 192 IDFGSGALLKDT-VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQVFF-- 262 (320)
T ss_dssp CCCTTCEECCSS-CBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH------HHHHCCCCC--
T ss_pred eeCccccccccc-cccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChh------hhhcccccc--
Confidence 999999876543 2345679999999999865 3 3678999999999999999999996531 223333222
Q ss_pred CCCCCCCHHHHHHHHHhcccCccccCCHHHHhcCcccCcCC
Q 042823 247 DPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESG 287 (477)
Q Consensus 247 ~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~~ 287 (477)
.+.+++++.+||.+||+.||++|||+.++++||||+...
T Consensus 263 --~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~hp~~~~~~ 301 (320)
T 3a99_A 263 --RQRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVL 301 (320)
T ss_dssp --SSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSSCC
T ss_pred --cccCCHHHHHHHHHHccCChhhCcCHHHHhcCHhhcCcc
Confidence 246899999999999999999999999999999998653
|
| >1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-47 Score=370.16 Aligned_cols=265 Identities=28% Similarity=0.381 Sum_probs=216.4
Q ss_pred ccccccccccccccccccccCCeEEEEEEE-ccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhcc-----CCCCeeE
Q 042823 15 GKAYEDVMLHYFFGRMLGRGQFGVSYLCTE-NSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLS-----GQPNVVE 88 (477)
Q Consensus 15 ~~~~~~~~~~Y~~~~~iG~G~~g~V~~~~~-~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~-----~hpniv~ 88 (477)
.+..+.+.++|++.+.||+|+||.||+|.+ +.+++.||+|++... ......+.+|+.++..+. .|++|++
T Consensus 6 ~~~g~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~----~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~ 81 (339)
T 1z57_A 6 CQSGDVLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV----DRYCEAARSEIQVLEHLNTTDPNSTFRCVQ 81 (339)
T ss_dssp CSTTCEETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSS----HHHHHHHHHHHHHHHHHHHHCTTCTTCBCC
T ss_pred eecCCCccCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecC----CchhHHHHHHHHHHHHhhhcCCCCceeeEe
Confidence 356677889999999999999999999998 568899999998643 234566788998888874 2345999
Q ss_pred EEEEEEeCCeEEEEEeccCCCchHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCC----
Q 042823 89 FKSTYEDETAVHVVMELCEGGDLFDRIIAKG--YNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDD---- 162 (477)
Q Consensus 89 ~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~--~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~---- 162 (477)
+++++...+.+|+||||+ +++|.+++...+ .+++..+..++.||+.||.|||++||+||||||+||++...+.
T Consensus 82 ~~~~~~~~~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~ 160 (339)
T 1z57_A 82 MLEWFEHHGHICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAY 160 (339)
T ss_dssp EEEEEEETTEEEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCCCEEEEE
T ss_pred eecccccCCcEEEEEcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHEEEecccccccc
Confidence 999999999999999999 789999998875 6889999999999999999999999999999999999943211
Q ss_pred ------------CCCEEEeecCCccccCCCcceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCC
Q 042823 163 ------------NALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAET 229 (477)
Q Consensus 163 ------------~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~ 229 (477)
.+.+||+|||++...... .....||+.|+|||++.+ .++.++|||||||++|+|++|.+||...+
T Consensus 161 ~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~ 238 (339)
T 1z57_A 161 NPKIKRDERTLINPDIKVVDFGSATYDDEH--HSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHD 238 (339)
T ss_dssp C----CEEEEESCCCEEECCCSSCEETTSC--CCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSC
T ss_pred CCccccccccccCCCceEeeCcccccCccc--cccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCC
Confidence 567999999999865432 245689999999999875 68999999999999999999999998877
Q ss_pred hhhHHHHHHcCCccCCC----------------CCC------------------------CCCCHHHHHHHHHhcccCcc
Q 042823 230 KKGTYDAILQGEIDFDT----------------DPW------------------------PSISSTAKDLVRRMLTKDPK 269 (477)
Q Consensus 230 ~~~~~~~i~~~~~~~~~----------------~~~------------------------~~~~~~~~~li~~~l~~dp~ 269 (477)
.......+.......+. ..| +..++.+.+||.+||+.||.
T Consensus 239 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~ 318 (339)
T 1z57_A 239 SKEHLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPA 318 (339)
T ss_dssp HHHHHHHHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTT
T ss_pred hHHHHHHHHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCcc
Confidence 66554443221111000 001 12356789999999999999
Q ss_pred ccCCHHHHhcCcccCcC
Q 042823 270 RRITAAQVLEHPWLRES 286 (477)
Q Consensus 270 ~R~s~~~~l~h~~~~~~ 286 (477)
+|||+.++++||||+..
T Consensus 319 ~Rpt~~ell~hp~f~~~ 335 (339)
T 1z57_A 319 KRITLREALKHPFFDLL 335 (339)
T ss_dssp TSCCHHHHTTSGGGGGG
T ss_pred cccCHHHHhcCHHHHHH
Confidence 99999999999999864
|
| >3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-47 Score=371.93 Aligned_cols=262 Identities=26% Similarity=0.386 Sum_probs=215.8
Q ss_pred ccccccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEE
Q 042823 15 GKAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYE 94 (477)
Q Consensus 15 ~~~~~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~ 94 (477)
+.....+.++|.+.+.||+|+||.||+|.++.+|+.||+|++.... ........+.+|+.++..+ +||||+++++++.
T Consensus 16 ~~~~~~l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~ 93 (353)
T 3coi_A 16 NKTAWELPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPF-QSEIFAKRAYRELLLLKHM-QHENVIGLLDVFT 93 (353)
T ss_dssp TTEEEEEETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTT-SSHHHHHHHHHHHHHHHHC-CCTTBCCCSEEEC
T ss_pred cCcccccCceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccc-cchHHHHHHHHHHHHHHhc-CCCCcccHhheEe
Confidence 3445567889999999999999999999999999999999986543 2334456788999999999 6999999999998
Q ss_pred eCCe------EEEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEE
Q 042823 95 DETA------VHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKV 168 (477)
Q Consensus 95 ~~~~------~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl 168 (477)
.... +|+||||+. |+|.+++. ..+++..+..++.||+.||.|||++||+||||||+||++ +.++.+||
T Consensus 94 ~~~~~~~~~~~~lv~e~~~-~~l~~~~~--~~~~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~NIl~---~~~~~~kl 167 (353)
T 3coi_A 94 PASSLRNFYDFYLVMPFMQ-TDLQKIMG--LKFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAV---NEDCELKI 167 (353)
T ss_dssp SCSSGGGCCCCEEEEECCS-EEGGGTTT--SCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEE---CTTCCEEE
T ss_pred cccccccceeEEEEecccc-CCHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEeE---CCCCcEEE
Confidence 7654 599999997 48887764 358999999999999999999999999999999999999 77889999
Q ss_pred eecCCccccCCCcceecccccccccchhhhhh--hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCC-----
Q 042823 169 TDFGSALLFEEGQVYRDIVGSGFYIAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGE----- 241 (477)
Q Consensus 169 ~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~----- 241 (477)
+|||++...... .....||+.|+|||++.+ .++.++|||||||++|+|++|..||.+.+....+..+....
T Consensus 168 ~Dfg~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~ 245 (353)
T 3coi_A 168 LDFGLARHADAE--MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGT 245 (353)
T ss_dssp CSTTCTTC----------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHHHHHHHHHHCBCCH
T ss_pred eecccccCCCCC--ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCH
Confidence 999999765432 345678999999999865 58999999999999999999999998877666555543310
Q ss_pred ------------------ccC----CCCCCCCCCHHHHHHHHHhcccCccccCCHHHHhcCcccCcC
Q 042823 242 ------------------IDF----DTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRES 286 (477)
Q Consensus 242 ------------------~~~----~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~ 286 (477)
... ....++.+++.+.+||.+||+.||++|||+.++++||||+..
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~hp~f~~~ 312 (353)
T 3coi_A 246 EFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFEPF 312 (353)
T ss_dssp HHHTTCSCHHHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGGTTT
T ss_pred HHHHHHhhHHHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhcCcchhhc
Confidence 000 012235689999999999999999999999999999999754
|
| >1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-47 Score=381.17 Aligned_cols=264 Identities=23% Similarity=0.372 Sum_probs=209.9
Q ss_pred ccccccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhcc-------CCCCee
Q 042823 15 GKAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLS-------GQPNVV 87 (477)
Q Consensus 15 ~~~~~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~-------~hpniv 87 (477)
.+..+.+.++|++.+.||+|+||+||+|.+..+++.||+|++... ......+.+|+.++..+. +||||+
T Consensus 29 ~~~g~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv 104 (397)
T 1wak_A 29 VKIGDLFNGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA----EHYTETALDEIRLLKSVRNSDPNDPNREMVV 104 (397)
T ss_dssp SCTTCEETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC----HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBC
T ss_pred EehhhhcCCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC----CcchHHHHHHHHHHHHHhhcCCCCCCcceee
Confidence 455567789999999999999999999999999999999998643 234567788999999885 288899
Q ss_pred EEEEEEE----eCCeEEEEEeccCCCchHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHc-CCeeccCCCCceeeeec
Q 042823 88 EFKSTYE----DETAVHVVMELCEGGDLFDRIIAK--GYNSERDAATVLRAIVNAVNVCHSM-GVMHRDLKPENFSFISR 160 (477)
Q Consensus 88 ~~~~~~~----~~~~~~lv~e~~~gg~L~~~l~~~--~~~~~~~~~~i~~qil~~L~~lH~~-~ivH~dlkp~Nil~~~~ 160 (477)
++++++. ....+|+||||+ +++|.+.+... +.+++..++.++.||+.||.|||++ ||+||||||+|||+...
T Consensus 105 ~~~~~~~~~~~~~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~givHrDikp~NIll~~~ 183 (397)
T 1wak_A 105 QLLDDFKISGVNGTHICMVFEVL-GHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVN 183 (397)
T ss_dssp CEEEEEEEEETTEEEEEEEECCC-CCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECCCCSGGGEEECCC
T ss_pred eeecceeecCCCCceEEEEEecc-CccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHeeEecc
Confidence 9999997 566899999999 55777777664 4689999999999999999999998 99999999999999322
Q ss_pred C----------------------------------------------CCCCEEEeecCCccccCCCcceecccccccccc
Q 042823 161 D----------------------------------------------DNALLKVTDFGSALLFEEGQVYRDIVGSGFYIA 194 (477)
Q Consensus 161 ~----------------------------------------------~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~a 194 (477)
+ ....+||+|||++...... .....||+.|+|
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~--~~~~~gt~~y~a 261 (397)
T 1wak_A 184 EQYIRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH--FTEDIQTRQYRS 261 (397)
T ss_dssp HHHHHHHHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC--SCSCCSCGGGCC
T ss_pred chhhhhhhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc--CccCCCCCcccC
Confidence 1 1137999999999876443 345689999999
Q ss_pred hhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChh------hHHHHHHc--CCc----------c---CC-------
Q 042823 195 PEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKK------GTYDAILQ--GEI----------D---FD------- 245 (477)
Q Consensus 195 PE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~------~~~~~i~~--~~~----------~---~~------- 245 (477)
||++.+ .++.++|||||||++|+|+||.+||...+.. .....+.. +.. . +.
T Consensus 262 PE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 341 (397)
T 1wak_A 262 LEVLIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKH 341 (397)
T ss_dssp HHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSS
T ss_pred ChhhcCCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCcccccc
Confidence 999875 5899999999999999999999999765421 12222211 000 0 00
Q ss_pred ---CCC-------------CCCCCHHHHHHHHHhcccCccccCCHHHHhcCcccCc
Q 042823 246 ---TDP-------------WPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRE 285 (477)
Q Consensus 246 ---~~~-------------~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~ 285 (477)
..+ ....++.+.+||.+||+.||++|||+.++|+||||++
T Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~ 397 (397)
T 1wak_A 342 ITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRHPWLNS 397 (397)
T ss_dssp CCCCCCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHTSGGGGC
T ss_pred ccccCCcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhhCccccC
Confidence 000 0123467889999999999999999999999999963
|
| >3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-47 Score=374.69 Aligned_cols=265 Identities=24% Similarity=0.350 Sum_probs=209.8
Q ss_pred ccccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCcc--------chhhHHHHHHHHHHHHhccCCCCeeE
Q 042823 17 AYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKM--------RLAENDMIRREIQIRLYLSGQPNVVE 88 (477)
Q Consensus 17 ~~~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~--------~~~~~~~~~~e~~~~~~l~~hpniv~ 88 (477)
....+.++|++++.||+|+||.||+|.+.. ++.||+|++...... .......+.+|+.++.++ +||||++
T Consensus 16 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~ 93 (362)
T 3pg1_A 16 ELHAMQSPYTVQRFISSGSYGAVCAGVDSE-GIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHF-HHPNILG 93 (362)
T ss_dssp HHHHTTCSCEEEEEEEEETTEEEEEEECTT-SCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHC-CCTTBCC
T ss_pred HHHHhccceEEeEEeccCCCEEEEEEECCC-CCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhC-CCcCccc
Confidence 446778899999999999999999999865 899999998653221 122346788999999999 6999999
Q ss_pred EEEEEEe-----CCeEEEEEeccCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCC
Q 042823 89 FKSTYED-----ETAVHVVMELCEGGDLFDRIIAK-GYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDD 162 (477)
Q Consensus 89 ~~~~~~~-----~~~~~lv~e~~~gg~L~~~l~~~-~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~ 162 (477)
+++++.. ...+|+||||++ |+|.+.+... ..+++..+..++.||+.||.|||++||+||||||+||++ +.
T Consensus 94 ~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~---~~ 169 (362)
T 3pg1_A 94 LRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILL---AD 169 (362)
T ss_dssp CSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE---CT
T ss_pred eeeeEEeccCCCcceEEEEEccCC-CCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCcCEecCCChHHEEE---cC
Confidence 9999843 346899999998 5888888764 368999999999999999999999999999999999999 77
Q ss_pred CCCEEEeecCCccccCCCcceecccccccccchhhhhh--hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcC
Q 042823 163 NALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQG 240 (477)
Q Consensus 163 ~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~ 240 (477)
++.+||+|||++.............||+.|+|||++.+ .++.++|||||||++|+|++|.+||.+.........+...
T Consensus 170 ~~~~kl~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~ 249 (362)
T 3pg1_A 170 NNDITICDFNLAREDTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEV 249 (362)
T ss_dssp TCCEEECCTTC---------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHH
T ss_pred CCCEEEEecCcccccccccccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Confidence 88899999999986655555556689999999999864 5899999999999999999999999988766665555331
Q ss_pred Cc------------------------cCCCC----CCCCCCHHHHHHHHHhcccCccccCCHHHHhcCcccCcCC
Q 042823 241 EI------------------------DFDTD----PWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESG 287 (477)
Q Consensus 241 ~~------------------------~~~~~----~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~~ 287 (477)
.. ..+.. ..+.+++.+.+||.+||+.||.+|||+.++|+||||+...
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~ 324 (362)
T 3pg1_A 250 VGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRHPYFESLF 324 (362)
T ss_dssp HCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGTTTC
T ss_pred cCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHcCchhhhcc
Confidence 10 01111 1245689999999999999999999999999999998753
|
| >3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.6e-47 Score=364.75 Aligned_cols=253 Identities=20% Similarity=0.282 Sum_probs=215.4
Q ss_pred cccccccccccccccccCCeEEEEEEEccCCce---EEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEE
Q 042823 18 YEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRP---YACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYE 94 (477)
Q Consensus 18 ~~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~---~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~ 94 (477)
.+...++|++.+.||+|+||.||+|.+..+++. ||+|++.... .......+.+|+.++..+ +||||+++++++.
T Consensus 44 ~~~~~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~ 120 (325)
T 3kul_A 44 REIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGY--TERQRRDFLSEASIMGQF-DHPNIIRLEGVVT 120 (325)
T ss_dssp CBCCGGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTC--CHHHHHHHHHHHHHHTTC-CCTTBCCEEEEEC
T ss_pred cccChhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCC--CHHHHHHHHHHHHHHHhC-CCCCCCcEEEEEE
Confidence 345677899999999999999999999866654 9999986432 334556788999999999 7999999999999
Q ss_pred eCCeEEEEEeccCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCC
Q 042823 95 DETAVHVVMELCEGGDLFDRIIAK-GYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGS 173 (477)
Q Consensus 95 ~~~~~~lv~e~~~gg~L~~~l~~~-~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~ 173 (477)
+.+.+|+|||||+||+|.+++... +.+++.++..++.|++.||.|||++||+||||||+||++ +.++.+||+|||+
T Consensus 121 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll---~~~~~~kl~Dfg~ 197 (325)
T 3kul_A 121 RGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLV---DSNLVCKVSDFGL 197 (325)
T ss_dssp GGGCCEEEEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE---CTTCCEEECCCSS
T ss_pred eCCccEEEeeCCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEE---CCCCCEEECCCCc
Confidence 999999999999999999999764 579999999999999999999999999999999999999 7788999999999
Q ss_pred ccccCCCcc----eecccccccccchhhhhh-hcCCccchHhHHHHHHHHhh-CCCCCCCCChhhHHHHHHcCCccCCCC
Q 042823 174 ALLFEEGQV----YRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQGEIDFDTD 247 (477)
Q Consensus 174 a~~~~~~~~----~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~t-g~~pf~~~~~~~~~~~i~~~~~~~~~~ 247 (477)
+........ .....+|+.|+|||++.+ .++.++|||||||++|+|++ |..||...........+..+... +
T Consensus 198 a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~~~~---~ 274 (325)
T 3kul_A 198 SRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEGYRL---P 274 (325)
T ss_dssp CEECC----CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHHHHHTTCCC---C
T ss_pred ccccccCccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcCCCC---C
Confidence 987643321 223356778999999874 68999999999999999999 99999998888888777765322 2
Q ss_pred CCCCCCHHHHHHHHHhcccCccccCCHHHHhc
Q 042823 248 PWPSISSTAKDLVRRMLTKDPKRRITAAQVLE 279 (477)
Q Consensus 248 ~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~ 279 (477)
....+++.+.++|.+||..||.+|||+.++++
T Consensus 275 ~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~ 306 (325)
T 3kul_A 275 APMGCPHALHQLMLDCWHKDRAQRPRFSQIVS 306 (325)
T ss_dssp CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred CCCCcCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 23468999999999999999999999999975
|
| >2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-46 Score=363.15 Aligned_cols=265 Identities=26% Similarity=0.341 Sum_probs=201.1
Q ss_pred ccccccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHH-HHHHhccCCCCeeEEEEEE
Q 042823 15 GKAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREI-QIRLYLSGQPNVVEFKSTY 93 (477)
Q Consensus 15 ~~~~~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~-~~~~~l~~hpniv~~~~~~ 93 (477)
++.+..-.++|++++.||+|+||.||+|.++.+++.||+|++..... .........|. .++..+ +||||+++++++
T Consensus 17 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~~~~~~~~~-~h~~i~~~~~~~ 93 (318)
T 2dyl_A 17 GQRYQAEINDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGN--KEENKRILMDLDVVLKSH-DCPYIVQCFGTF 93 (318)
T ss_dssp SSEEECCGGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSC--HHHHHHHHHHHHHHHHTT-TCTTBCCEEEEE
T ss_pred chhhhhhhccccccceeeecCCeeEEEEEEecCCeEEEEEEeccccc--chHHHHHHHHHHHHHHhc-CCCceeeEEEEE
Confidence 45667777899999999999999999999999999999999975432 12223333444 444445 899999999999
Q ss_pred EeCCeEEEEEeccCCCchHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHc-CCeeccCCCCceeeeecCCCCCEEEeec
Q 042823 94 EDETAVHVVMELCEGGDLFDRIIA-KGYNSERDAATVLRAIVNAVNVCHSM-GVMHRDLKPENFSFISRDDNALLKVTDF 171 (477)
Q Consensus 94 ~~~~~~~lv~e~~~gg~L~~~l~~-~~~~~~~~~~~i~~qil~~L~~lH~~-~ivH~dlkp~Nil~~~~~~~~~~kl~Df 171 (477)
.....+|+||||+ ++.+..+... .+.+++..+..++.|++.||.|||++ |++||||||+||++ +.++.+||+||
T Consensus 94 ~~~~~~~lv~e~~-~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dlkp~Nil~---~~~~~~kl~df 169 (318)
T 2dyl_A 94 ITNTDVFIAMELM-GTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILL---DERGQIKLCDF 169 (318)
T ss_dssp ECSSEEEEEECCC-SEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCGGGEEE---CTTSCEEECCC
T ss_pred ecCCcEEEEEecc-CCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhhCCEEeCCCCHHHEEE---CCCCCEEEEEC
Confidence 9999999999999 5555555443 56799999999999999999999995 99999999999999 77889999999
Q ss_pred CCccccCCCcceecccccccccchhhhh------hhcCCccchHhHHHHHHHHhhCCCCCCCC-ChhhHHHHHHcCCccC
Q 042823 172 GSALLFEEGQVYRDIVGSGFYIAPEVLR------RRYGKEIDIWSAGVILYILLSGVPPFWAE-TKKGTYDAILQGEIDF 244 (477)
Q Consensus 172 g~a~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~~~~DiwslG~il~~l~tg~~pf~~~-~~~~~~~~i~~~~~~~ 244 (477)
|++.............||+.|+|||++. ..++.++|||||||++|+|++|..||... ........+..+....
T Consensus 170 g~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~ 249 (318)
T 2dyl_A 170 GISGRLVDDKAKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEEPPL 249 (318)
T ss_dssp TTC--------------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHHSCCCC
T ss_pred CCchhccCCccccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccHHHHHHHhccCCCC
Confidence 9997765554445567999999999984 35888999999999999999999999774 4445555555554332
Q ss_pred CCCCCCCCCHHHHHHHHHhcccCccccCCHHHHhcCcccCcCC
Q 042823 245 DTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESG 287 (477)
Q Consensus 245 ~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~~ 287 (477)
. +....+++++.++|.+||+.||.+|||+.++++||||+...
T Consensus 250 ~-~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~~~~~~~ 291 (318)
T 2dyl_A 250 L-PGHMGFSGDFQSFVKDCLTKDHRKRPKYNKLLEHSFIKRYE 291 (318)
T ss_dssp C-CSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTSHHHHHHH
T ss_pred C-CccCCCCHHHHHHHHHHccCChhHCcCHHHHhhCHHHHhcc
Confidence 2 22346899999999999999999999999999999997654
|
| >3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-46 Score=371.18 Aligned_cols=257 Identities=19% Similarity=0.281 Sum_probs=220.3
Q ss_pred cccccccccccccccccccCCeEEEEEEEccC-------CceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeE
Q 042823 16 KAYEDVMLHYFFGRMLGRGQFGVSYLCTENST-------NRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVE 88 (477)
Q Consensus 16 ~~~~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~-------~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~ 88 (477)
..++...++|.+++.||+|+||.||+|.+..+ +..||+|++.... .......+.+|+.++..+.+||||++
T Consensus 62 ~~~~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~hpnIv~ 139 (382)
T 3tt0_A 62 PRWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDA--TEKDLSDLISEMEMMKMIGKHKNIIN 139 (382)
T ss_dssp TTTBCCGGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTC--CHHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred cccccchhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeecccc--CHHHHHHHHHHHHHHHHhcCCchhhh
Confidence 45567778999999999999999999997543 3579999986542 33455778899999999978999999
Q ss_pred EEEEEEeCCeEEEEEeccCCCchHHHHHHcC----------------CCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCC
Q 042823 89 FKSTYEDETAVHVVMELCEGGDLFDRIIAKG----------------YNSERDAATVLRAIVNAVNVCHSMGVMHRDLKP 152 (477)
Q Consensus 89 ~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~----------------~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp 152 (477)
+++++...+.+|+|||||+||+|.+++.... .+++..++.++.||+.||.|||++||+||||||
T Consensus 140 ~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp 219 (382)
T 3tt0_A 140 LLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAA 219 (382)
T ss_dssp EEEEECSSSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCG
T ss_pred heeeeccCCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCEecCCCCc
Confidence 9999999999999999999999999998754 489999999999999999999999999999999
Q ss_pred CceeeeecCCCCCEEEeecCCccccCCCc---ceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhh-CCCCCCC
Q 042823 153 ENFSFISRDDNALLKVTDFGSALLFEEGQ---VYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLS-GVPPFWA 227 (477)
Q Consensus 153 ~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~t-g~~pf~~ 227 (477)
+||++ +.++.+||+|||++....... ......||+.|+|||++.+ .++.++|||||||++|+|++ |..||.+
T Consensus 220 ~NIll---~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~ 296 (382)
T 3tt0_A 220 RNVLV---TEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPG 296 (382)
T ss_dssp GGEEE---CTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTT
T ss_pred ceEEE---cCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCC
Confidence 99999 777899999999998664432 2234467889999999875 58999999999999999999 9999998
Q ss_pred CChhhHHHHHHcCCccCCCCCCCCCCHHHHHHHHHhcccCccccCCHHHHhcC
Q 042823 228 ETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEH 280 (477)
Q Consensus 228 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h 280 (477)
.........+..+.... ....+++++.+||.+||+.||++|||+.+++++
T Consensus 297 ~~~~~~~~~~~~~~~~~---~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~ 346 (382)
T 3tt0_A 297 VPVEELFKLLKEGHRMD---KPSNCTNELYMMMRDCWHAVPSQRPTFKQLVED 346 (382)
T ss_dssp CCHHHHHHHHHTTCCCC---CCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred CCHHHHHHHHHcCCCCC---CCccCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 88877777776654322 224689999999999999999999999999874
|
| >2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-46 Score=359.07 Aligned_cols=254 Identities=24% Similarity=0.424 Sum_probs=207.1
Q ss_pred ccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEe
Q 042823 25 YFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVVME 104 (477)
Q Consensus 25 Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~lv~e 104 (477)
|.....||+|+||.||+|.+..+++.||+|++.... ......+.+|+.++..+ +||||+++++++...+..++|||
T Consensus 24 ~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e 99 (295)
T 2clq_A 24 NGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERD---SRYSQPLHEEIALHKHL-KHKNIVQYLGSFSENGFIKIFME 99 (295)
T ss_dssp TSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCC---C---HHHHHHHHHHHTC-CCTTBCCEEEEEEETTEEEEEEE
T ss_pred CCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCc---hHHHHHHHHHHHHHHhC-CCCCEeeEeeEEEeCCcEEEEEE
Confidence 444459999999999999999999999999987543 23456788999999999 79999999999999999999999
Q ss_pred ccCCCchHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCC-CCCEEEeecCCccccCCC
Q 042823 105 LCEGGDLFDRIIAKG---YNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDD-NALLKVTDFGSALLFEEG 180 (477)
Q Consensus 105 ~~~gg~L~~~l~~~~---~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~-~~~~kl~Dfg~a~~~~~~ 180 (477)
|++|++|.+++.... .+++..+..++.|++.||.|||++|++||||||+||++ +. ++.+||+|||++......
T Consensus 100 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~---~~~~~~~kl~Dfg~~~~~~~~ 176 (295)
T 2clq_A 100 QVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLI---NTYSGVLKISDFGTSKRLAGI 176 (295)
T ss_dssp CCSEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE---ETTTCCEEECCTTTCEESCC-
T ss_pred eCCCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhCCEEccCCChhhEEE---ECCCCCEEEeecccccccCCC
Confidence 999999999998752 45788999999999999999999999999999999998 44 678999999999866432
Q ss_pred c-ceecccccccccchhhhhh---hcCCccchHhHHHHHHHHhhCCCCCCCCChhhH-HHHHHcCCccCCCCCCCCCCHH
Q 042823 181 Q-VYRDIVGSGFYIAPEVLRR---RYGKEIDIWSAGVILYILLSGVPPFWAETKKGT-YDAILQGEIDFDTDPWPSISST 255 (477)
Q Consensus 181 ~-~~~~~~gt~~y~aPE~~~~---~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~~ 255 (477)
. ......||+.|+|||++.+ .++.++||||||+++|+|++|..||........ ...... ........+.++++
T Consensus 177 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 254 (295)
T 2clq_A 177 NPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGM--FKVHPEIPESMSAE 254 (295)
T ss_dssp ----CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHHHHHHH--HCCCCCCCTTSCHH
T ss_pred CCcccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHHHhhcc--ccccccccccCCHH
Confidence 2 2345679999999999864 278899999999999999999999976443222 111111 11222233568999
Q ss_pred HHHHHHHhcccCccccCCHHHHhcCcccCcCC
Q 042823 256 AKDLVRRMLTKDPKRRITAAQVLEHPWLRESG 287 (477)
Q Consensus 256 ~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~~ 287 (477)
+.++|.+||+.||++|||+.++++||||+...
T Consensus 255 ~~~li~~~l~~dp~~Rps~~~ll~~~~~~~~~ 286 (295)
T 2clq_A 255 AKAFILKCFEPDPDKRACANDLLVDEFLKVSS 286 (295)
T ss_dssp HHHHHHHTTCSSTTTSCCHHHHHTSGGGCC--
T ss_pred HHHHHHHHccCChhhCCCHHHHhcChhhhhcc
Confidence 99999999999999999999999999998654
|
| >2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.4e-47 Score=362.71 Aligned_cols=257 Identities=25% Similarity=0.358 Sum_probs=207.7
Q ss_pred cccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCC
Q 042823 18 YEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDET 97 (477)
Q Consensus 18 ~~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~ 97 (477)
.....++|++.+.||+|+||.||+|.+..+++.||+|++.............+.+|+.++..+ +||||+++++++..++
T Consensus 29 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l-~hp~iv~~~~~~~~~~ 107 (309)
T 2h34_A 29 EGTQFGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRL-QEPHVVPIHDFGEIDG 107 (309)
T ss_dssp -----CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTC-CCTTBCCEEEEEEETT
T ss_pred CCcEeccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhc-CCCCeeEEEEEEeeCC
Confidence 345567899999999999999999999999999999998765444444567788999999999 7999999999999999
Q ss_pred eEEEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCcccc
Q 042823 98 AVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLF 177 (477)
Q Consensus 98 ~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~ 177 (477)
.+|+||||++|++|.+++...+.+++..+..++.|++.||.|||++||+||||||+||++ +.++.+||+|||++...
T Consensus 108 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~NIl~---~~~~~~kl~Dfg~~~~~ 184 (309)
T 2h34_A 108 QLYVDMRLINGVDLAAMLRRQGPLAPPRAVAIVRQIGSALDAAHAAGATHRDVKPENILV---SADDFAYLVDFGIASAT 184 (309)
T ss_dssp EEEEEEECCCCEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE---CTTSCEEECSCCC----
T ss_pred eEEEEEEecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCcCCcCCCChHHEEE---cCCCCEEEecCccCccc
Confidence 999999999999999999998889999999999999999999999999999999999999 67789999999998765
Q ss_pred CCCc--ceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCCCCH
Q 042823 178 EEGQ--VYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISS 254 (477)
Q Consensus 178 ~~~~--~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 254 (477)
.... ......||+.|+|||++.+ .++.++||||||+++|+|++|..||.+.........+ ......+....+.+|+
T Consensus 185 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 263 (309)
T 2h34_A 185 TDEKLTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLSVMGAHI-NQAIPRPSTVRPGIPV 263 (309)
T ss_dssp ------------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHHHHHHHH-HSCCCCGGGTSTTCCT
T ss_pred cccccccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHHHHHHHh-ccCCCCccccCCCCCH
Confidence 4432 2234579999999999864 5889999999999999999999999876655333333 3333333334467899
Q ss_pred HHHHHHHHhcccCccccC-CHHHHhc
Q 042823 255 TAKDLVRRMLTKDPKRRI-TAAQVLE 279 (477)
Q Consensus 255 ~~~~li~~~l~~dp~~R~-s~~~~l~ 279 (477)
.+.++|.+||+.||++|| |++++++
T Consensus 264 ~l~~li~~~l~~dP~~Rp~s~~~l~~ 289 (309)
T 2h34_A 264 AFDAVIARGMAKNPEDRYVTCGDLSA 289 (309)
T ss_dssp HHHHHHHHHTCSSGGGSCSSHHHHHH
T ss_pred HHHHHHHHhccCCHHHHHHhHHHHHH
Confidence 999999999999999999 7877764
|
| >3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-46 Score=351.80 Aligned_cols=250 Identities=24% Similarity=0.299 Sum_probs=216.1
Q ss_pred ccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCe
Q 042823 19 EDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETA 98 (477)
Q Consensus 19 ~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~ 98 (477)
+.-.++|++.+.||+|+||.||+|.++ ++..||+|++..... ....+.+|+.++..+ +||||+++++++.+...
T Consensus 4 ~l~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~----~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~ 77 (268)
T 3sxs_A 4 ELKREEITLLKELGSGQFGVVKLGKWK-GQYDVAVKMIKEGSM----SEDEFFQEAQTMMKL-SHPKLVKFYGVCSKEYP 77 (268)
T ss_dssp BCCGGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECBTTB----CHHHHHHHHHHHHHC-CCTTBCCEEEEECSSSS
T ss_pred EechhheeeeeeeccCCCceEEEEEec-CceeEEEEEeccCCC----cHHHHHHHHHHHHhC-CCCCEeeEEEEEccCCc
Confidence 445678999999999999999999875 567899999865432 245688999999999 69999999999999999
Q ss_pred EEEEEeccCCCchHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCcccc
Q 042823 99 VHVVMELCEGGDLFDRIIAKG-YNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLF 177 (477)
Q Consensus 99 ~~lv~e~~~gg~L~~~l~~~~-~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~ 177 (477)
.|+||||++|++|.+++...+ .+++..++.++.|++.||.|||++||+||||||+||++ +.++.+||+|||++...
T Consensus 78 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~---~~~~~~~l~Dfg~~~~~ 154 (268)
T 3sxs_A 78 IYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESHQFIHRDLAARNCLV---DRDLCVKVSDFGMTRYV 154 (268)
T ss_dssp EEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEEESSCSGGGEEE---CTTCCEEECCTTCEEEC
T ss_pred eEEEEEccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCcceEEE---CCCCCEEEccCccceec
Confidence 999999999999999998754 59999999999999999999999999999999999999 77889999999999876
Q ss_pred CCCcc--eecccccccccchhhhhh-hcCCccchHhHHHHHHHHhh-CCCCCCCCChhhHHHHHHcCCccCCCCCCCCCC
Q 042823 178 EEGQV--YRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQGEIDFDTDPWPSIS 253 (477)
Q Consensus 178 ~~~~~--~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~t-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 253 (477)
..... .....+|+.|+|||++.+ .++.++||||||+++|+|++ |.+||...........+..+.....+ ..+|
T Consensus 155 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~---~~~~ 231 (268)
T 3sxs_A 155 LDDQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQGHRLYRP---HLAS 231 (268)
T ss_dssp CTTCEEECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCCCCCC---TTSC
T ss_pred chhhhhcccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChHHHHHHHHcCCCCCCC---CcCh
Confidence 54432 223456778999999875 68999999999999999999 99999988888777777766543332 3578
Q ss_pred HHHHHHHHHhcccCccccCCHHHHhcC
Q 042823 254 STAKDLVRRMLTKDPKRRITAAQVLEH 280 (477)
Q Consensus 254 ~~~~~li~~~l~~dp~~R~s~~~~l~h 280 (477)
+.+.++|.+||+.||++|||+.+++++
T Consensus 232 ~~l~~li~~~l~~~p~~Rps~~~ll~~ 258 (268)
T 3sxs_A 232 DTIYQIMYSCWHELPEKRPTFQQLLSS 258 (268)
T ss_dssp HHHHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred HHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 999999999999999999999999875
|
| >3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-46 Score=361.45 Aligned_cols=268 Identities=23% Similarity=0.367 Sum_probs=215.5
Q ss_pred CCccccccccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccC-CCCeeEE
Q 042823 11 DPILGKAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSG-QPNVVEF 89 (477)
Q Consensus 11 ~~~~~~~~~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~-hpniv~~ 89 (477)
+.+..+......++|++.+.||+|+||.||+|.+. +++.||+|++..... .......+.+|+.++..+.. ||||+++
T Consensus 16 ~~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~~~~~~iv~~ 93 (313)
T 3cek_A 16 ENLYFQSMSVKGRIYSILKQIGSGGSSKVFQVLNE-KKQIYAIKYVNLEEA-DNQTLDSYRNEIAYLNKLQQHSDKIIRL 93 (313)
T ss_dssp ----CCEEEETTEEEEEEEEEECCSSEEEEEEECT-TCCEEEEEEEECSSC-CHHHHHHHHHHHHHHHHHGGGCTTBCCE
T ss_pred CCCCeeeeeeccceEEEEEEecCCCCEEEEEEEcC-CCcEEEEEEeccccc-cccchHHHHHHHHHHHhccccCCceEEE
Confidence 44555666777788999999999999999999985 588999999875432 33456778999999999964 6999999
Q ss_pred EEEEEeCCeEEEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEe
Q 042823 90 KSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVT 169 (477)
Q Consensus 90 ~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~ 169 (477)
++++.....+|+||| +.+++|.+++...+.+++..+..++.|++.||.|||++||+||||||+||++ + ++.+||+
T Consensus 94 ~~~~~~~~~~~lv~e-~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~---~-~~~~kL~ 168 (313)
T 3cek_A 94 YDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLI---V-DGMLKLI 168 (313)
T ss_dssp EEEEECSSEEEEEEC-CCSEEHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE---E-TTEEEEC
T ss_pred EEEeecCCEEEEEEe-cCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEE---E-CCeEEEe
Confidence 999999999999999 5578999999998899999999999999999999999999999999999999 2 3789999
Q ss_pred ecCCccccCCCcc---eecccccccccchhhhhh------------hcCCccchHhHHHHHHHHhhCCCCCCCCChh-hH
Q 042823 170 DFGSALLFEEGQV---YRDIVGSGFYIAPEVLRR------------RYGKEIDIWSAGVILYILLSGVPPFWAETKK-GT 233 (477)
Q Consensus 170 Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~------------~~~~~~DiwslG~il~~l~tg~~pf~~~~~~-~~ 233 (477)
|||++........ .....||+.|+|||++.+ .++.++|||||||++|+|++|..||...... ..
T Consensus 169 Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~ 248 (313)
T 3cek_A 169 DFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISK 248 (313)
T ss_dssp CCSSSCC--------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHH
T ss_pred eccccccccCccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHHHHH
Confidence 9999987643321 234578999999999864 5788999999999999999999999765432 33
Q ss_pred HHHHHcCCccCCCCCCCCCCHHHHHHHHHhcccCccccCCHHHHhcCcccCcCC
Q 042823 234 YDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESG 287 (477)
Q Consensus 234 ~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~~ 287 (477)
...+........ .....++.+.++|.+||+.||.+|||+.++++||||+...
T Consensus 249 ~~~~~~~~~~~~--~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h~~~~~~~ 300 (313)
T 3cek_A 249 LHAIIDPNHEIE--FPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQT 300 (313)
T ss_dssp HHHHHCTTSCCC--CCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHCC-
T ss_pred HHHHHhcccccC--CcccchHHHHHHHHHHccCCcccCcCHHHHhcCccccCCC
Confidence 334444332222 1234688999999999999999999999999999998654
|
| >3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-47 Score=367.18 Aligned_cols=267 Identities=22% Similarity=0.304 Sum_probs=197.2
Q ss_pred ccccccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEE
Q 042823 15 GKAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYE 94 (477)
Q Consensus 15 ~~~~~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~ 94 (477)
...+....++|++.+.||+|+||.||+|.++.+++.||+|++..... ......+.+|+..+.+..+||||+++++++.
T Consensus 14 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~ 91 (327)
T 3aln_A 14 EQHWDFTAEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVD--EKEQKQLLMDLDVVMRSSDCPYIVQFYGALF 91 (327)
T ss_dssp CEEECCCSCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCC--HHHHHHHHHHHHHHHSSCCCTTBCCEEEEEE
T ss_pred HHhcccCHHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccC--chHHHHHHHHHHHHHHcCCCCcEeeeeeEEE
Confidence 34555667899999999999999999999999999999999975432 2334556667765555558999999999999
Q ss_pred eCCeEEEEEeccCCCchHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHc-CCeeccCCCCceeeeecCCCCCEEE
Q 042823 95 DETAVHVVMELCEGGDLFDRIIA-----KGYNSERDAATVLRAIVNAVNVCHSM-GVMHRDLKPENFSFISRDDNALLKV 168 (477)
Q Consensus 95 ~~~~~~lv~e~~~gg~L~~~l~~-----~~~~~~~~~~~i~~qil~~L~~lH~~-~ivH~dlkp~Nil~~~~~~~~~~kl 168 (477)
..+..|+||||++| +|.+++.. ...+++..+..++.|++.||.|||+. ||+||||||+||++ +.++.+||
T Consensus 92 ~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~ivH~dlkp~NIll---~~~~~~kl 167 (327)
T 3aln_A 92 REGDCWICMELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLKIIHRDIKPSNILL---DRSGNIKL 167 (327)
T ss_dssp CSSEEEEEECCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHSCCCSCCCGGGEEE---ETTTEEEE
T ss_pred eCCceEEEEeecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccCCEeECCCCHHHEEE---cCCCCEEE
Confidence 99999999999986 88777764 56789999999999999999999999 99999999999999 67789999
Q ss_pred eecCCccccCCCcceecccccccccchhhhh-----hhcCCccchHhHHHHHHHHhhCCCCCCCCChh-hHHHHHHcCC-
Q 042823 169 TDFGSALLFEEGQVYRDIVGSGFYIAPEVLR-----RRYGKEIDIWSAGVILYILLSGVPPFWAETKK-GTYDAILQGE- 241 (477)
Q Consensus 169 ~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~DiwslG~il~~l~tg~~pf~~~~~~-~~~~~i~~~~- 241 (477)
+|||++.............||+.|+|||++. ..++.++|||||||++|+|++|..||...... .....+..+.
T Consensus 168 ~Dfg~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~ 247 (327)
T 3aln_A 168 CDFGISGQLVDSIAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVKGDP 247 (327)
T ss_dssp CCCSSSCC------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC-------CCCCCSCC
T ss_pred ccCCCceecccccccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHHHHHHHhcCCC
Confidence 9999998765544444557999999999983 35899999999999999999999999764321 1111122221
Q ss_pred ccCCCCCCCCCCHHHHHHHHHhcccCccccCCHHHHhcCcccCcCC
Q 042823 242 IDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESG 287 (477)
Q Consensus 242 ~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~~ 287 (477)
..++...++.+++.+.+||.+||+.||.+|||+.++++||||....
T Consensus 248 ~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~hp~~~~~~ 293 (327)
T 3aln_A 248 PQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLKHPFILMYE 293 (327)
T ss_dssp CCCCCCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHHHH
T ss_pred CCCCCcccccCCHHHHHHHHHHhhCChhhCcCHHHHHhChHHHHhH
Confidence 1122223346899999999999999999999999999999997654
|
| >3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-46 Score=355.95 Aligned_cols=255 Identities=21% Similarity=0.268 Sum_probs=216.2
Q ss_pred cccccccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEE
Q 042823 14 LGKAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTY 93 (477)
Q Consensus 14 ~~~~~~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~ 93 (477)
-...++...++|++.+.||+|+||+||+|.+. ++..||+|++..... ....+.+|+.++..+ +||||+++++++
T Consensus 15 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~----~~~~~~~E~~~l~~l-~h~~i~~~~~~~ 88 (283)
T 3gen_A 15 GYGSWEIDPKDLTFLKELGTGQFGVVKYGKWR-GQYDVAIKMIKEGSM----SEDEFIEEAKVMMNL-SHEKLVQLYGVC 88 (283)
T ss_dssp -CCTTBCCGGGEEEEEECC---CEEEEEEEET-TTEEEEEEEECTTSB----CHHHHHHHHHHHHTC-CCTTBCCEEEEE
T ss_pred CCCCccCCHHHHHhHhhcCCCCCceEEEEEEc-CCCeEEEEEecCCCC----CHHHHHHHHHHHhcC-CCCCEeeEEEEE
Confidence 34566677789999999999999999999876 677899999875432 235688999999999 699999999999
Q ss_pred EeCCeEEEEEeccCCCchHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecC
Q 042823 94 EDETAVHVVMELCEGGDLFDRIIA-KGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFG 172 (477)
Q Consensus 94 ~~~~~~~lv~e~~~gg~L~~~l~~-~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg 172 (477)
.+.+.+|+||||++||+|.+++.. ...+++..+..++.|++.||.|||++||+||||||+||++ +.++.+||+|||
T Consensus 89 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nili---~~~~~~kl~Dfg 165 (283)
T 3gen_A 89 TKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLV---NDQGVVKVSDFG 165 (283)
T ss_dssp CSSSSEEEEECCCTTCBHHHHHHCGGGCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEE---CTTSCEEECSTT
T ss_pred ecCCCeEEEEeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCccceEEE---cCCCCEEEcccc
Confidence 999999999999999999999987 5679999999999999999999999999999999999999 778899999999
Q ss_pred CccccCCCcc--eecccccccccchhhhh-hhcCCccchHhHHHHHHHHhh-CCCCCCCCChhhHHHHHHcCCccCCCCC
Q 042823 173 SALLFEEGQV--YRDIVGSGFYIAPEVLR-RRYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQGEIDFDTDP 248 (477)
Q Consensus 173 ~a~~~~~~~~--~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~l~t-g~~pf~~~~~~~~~~~i~~~~~~~~~~~ 248 (477)
++........ .....+|+.|+|||++. ..++.++||||||+++|+|+| |.+||...........+..+.....
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~--- 242 (283)
T 3gen_A 166 LSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYR--- 242 (283)
T ss_dssp GGGGBCCHHHHSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCCCCC---
T ss_pred ccccccccccccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChhHHHHHHhcccCCCC---
Confidence 9976543221 22345678899999987 468999999999999999998 9999998888888877776643322
Q ss_pred CCCCCHHHHHHHHHhcccCccccCCHHHHhcC
Q 042823 249 WPSISSTAKDLVRRMLTKDPKRRITAAQVLEH 280 (477)
Q Consensus 249 ~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h 280 (477)
...+++.+.++|.+||+.||.+|||+.++++|
T Consensus 243 ~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~ 274 (283)
T 3gen_A 243 PHLASEKVYTIMYSCWHEKADERPTFKILLSN 274 (283)
T ss_dssp CTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred CCcCCHHHHHHHHHHccCChhHCcCHHHHHHH
Confidence 24578999999999999999999999999875
|
| >4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-46 Score=353.89 Aligned_cols=251 Identities=21% Similarity=0.320 Sum_probs=215.5
Q ss_pred cccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCC
Q 042823 18 YEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDET 97 (477)
Q Consensus 18 ~~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~ 97 (477)
+..-.++|++.+.||+|+||.||+|.+. +++.||+|++..... ....+.+|+.++.++ +||||+++++++.+..
T Consensus 5 ~~i~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~----~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~ 78 (269)
T 4hcu_A 5 WVIDPSELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAM----SEEDFIEEAEVMMKL-SHPKLVQLYGVCLEQA 78 (269)
T ss_dssp CBCCGGGEEEEEEEEECSSCEEEEEEET-TTEEEEEEEECTTSB----CHHHHHHHHHHHHTC-CCTTBCCEEEEECSSS
T ss_pred EEeChhhceeeheecCCCccEEEEEEec-CCCeEEEEEeccccc----CHHHHHHHHHHHHhC-CCCCEeeEEEEEecCC
Confidence 3444578999999999999999999986 577899999875432 235688999999999 6999999999999999
Q ss_pred eEEEEEeccCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccc
Q 042823 98 AVHVVMELCEGGDLFDRIIAK-GYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALL 176 (477)
Q Consensus 98 ~~~lv~e~~~gg~L~~~l~~~-~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~ 176 (477)
..|+||||++||+|.+++... +.+++..+..++.|++.||.|||++||+||||||+||++ +.++.+||+|||++..
T Consensus 79 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~---~~~~~~kl~Dfg~~~~ 155 (269)
T 4hcu_A 79 PICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLV---GENQVIKVSDFGMTRF 155 (269)
T ss_dssp SEEEEEECCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE---CGGGCEEECCTTGGGG
T ss_pred ceEEEEEeCCCCcHHHHHHhcCcccCHHHHHHHHHHHHHHHHHHHhCCeecCCcchheEEE---cCCCCEEecccccccc
Confidence 999999999999999999764 468999999999999999999999999999999999999 6778899999999986
Q ss_pred cCCCc--ceecccccccccchhhhh-hhcCCccchHhHHHHHHHHhh-CCCCCCCCChhhHHHHHHcCCccCCCCCCCCC
Q 042823 177 FEEGQ--VYRDIVGSGFYIAPEVLR-RRYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQGEIDFDTDPWPSI 252 (477)
Q Consensus 177 ~~~~~--~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~l~t-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 252 (477)
..... ......+|+.|+|||++. ..++.++||||+|+++|+|++ |.+||...........+..+..... ...+
T Consensus 156 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~~~~~~~~~~~~~~~---~~~~ 232 (269)
T 4hcu_A 156 VLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYK---PRLA 232 (269)
T ss_dssp BCCHHHHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCCCC---CTTS
T ss_pred ccccccccccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhcCccCCC---CCcC
Confidence 54332 123345678899999987 468999999999999999999 9999999888888887776633322 2457
Q ss_pred CHHHHHHHHHhcccCccccCCHHHHhcC
Q 042823 253 SSTAKDLVRRMLTKDPKRRITAAQVLEH 280 (477)
Q Consensus 253 ~~~~~~li~~~l~~dp~~R~s~~~~l~h 280 (477)
++.+.+++.+||+.||++|||+.++++|
T Consensus 233 ~~~~~~li~~~l~~~p~~Rps~~~ll~~ 260 (269)
T 4hcu_A 233 STHVYQIMNHCWRERPEDRPAFSRLLRQ 260 (269)
T ss_dssp CHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred CHHHHHHHHHHccCCcccCcCHHHHHHH
Confidence 9999999999999999999999999875
|
| >3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-47 Score=364.54 Aligned_cols=245 Identities=22% Similarity=0.351 Sum_probs=207.2
Q ss_pred cccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEE
Q 042823 22 MLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHV 101 (477)
Q Consensus 22 ~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~l 101 (477)
.++|++++.||+|+||+||+|.+..+++.||+|++... .......+.+|+.++..+ +||||+++++++.++...|+
T Consensus 9 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~---~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~~l 84 (310)
T 3s95_A 9 PSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRF---DEETQRTFLKEVKVMRCL-EHPNVLKFIGVLYKDKRLNF 84 (310)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCC---CHHHHHHHHHHHHHHTTC-CCTTBCCEEEEEEETTEEEE
T ss_pred hhHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccC---CHHHHHHHHHHHHHHHhC-CCcCcccEEEEEecCCeeEE
Confidence 46899999999999999999999999999999988542 345567889999999999 69999999999999999999
Q ss_pred EEeccCCCchHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCCC
Q 042823 102 VMELCEGGDLFDRIIA-KGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEG 180 (477)
Q Consensus 102 v~e~~~gg~L~~~l~~-~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~ 180 (477)
|||||+||+|.+++.. ...+++.++..++.|++.||.|||++||+||||||+||++ +.++.+||+|||++......
T Consensus 85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nil~---~~~~~~kl~Dfg~~~~~~~~ 161 (310)
T 3s95_A 85 ITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMNIIHRDLNSHNCLV---RENKNVVVADFGLARLMVDE 161 (310)
T ss_dssp EEECCTTCBHHHHHHHCCTTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEE---CTTSCEEECCCTTCEECC--
T ss_pred EEEecCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCcCeEEE---CCCCCEEEeecccceecccc
Confidence 9999999999999987 5678999999999999999999999999999999999999 77889999999999765432
Q ss_pred cce---------------ecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChhhH-----HHHHHc
Q 042823 181 QVY---------------RDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKGT-----YDAILQ 239 (477)
Q Consensus 181 ~~~---------------~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~-----~~~i~~ 239 (477)
... ....||+.|+|||++.+ .++.++|||||||++|+|++|..||........ ......
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~ 241 (310)
T 3s95_A 162 KTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFLD 241 (310)
T ss_dssp ------------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSBCHHHHHH
T ss_pred cccccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhhhhhcccc
Confidence 211 14579999999999875 589999999999999999999999865332111 111111
Q ss_pred CCccCCCCCCCCCCHHHHHHHHHhcccCccccCCHHHHhc
Q 042823 240 GEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLE 279 (477)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~ 279 (477)
. ...+.+|+.+.+++.+||+.||++|||+.++++
T Consensus 242 ~------~~~~~~~~~l~~li~~~l~~dP~~Rps~~~l~~ 275 (310)
T 3s95_A 242 R------YCPPNCPPSFFPITVRCCDLDPEKRPSFVKLEH 275 (310)
T ss_dssp H------TCCTTCCTTHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred c------cCCCCCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 1 112467889999999999999999999999975
|
| >4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-46 Score=356.05 Aligned_cols=253 Identities=22% Similarity=0.304 Sum_probs=207.2
Q ss_pred cccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhH----HHHHHHHHHHHhccCCCCeeEEEEEEEe
Q 042823 20 DVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAEN----DMIRREIQIRLYLSGQPNVVEFKSTYED 95 (477)
Q Consensus 20 ~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~----~~~~~e~~~~~~l~~hpniv~~~~~~~~ 95 (477)
...++|++.+.||+|+||.||+|.+..+++.||+|++........... ..+.+|+.++..+ +||||+++++++.+
T Consensus 16 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~ 94 (287)
T 4f0f_A 16 LADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNL-NHPNIVKLYGLMHN 94 (287)
T ss_dssp CCSTTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTC-CCTTBCCEEEEETT
T ss_pred hhhccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhC-CCCCchhhheeecC
Confidence 445689999999999999999999999999999999865443222211 5788999999999 79999999999976
Q ss_pred CCeEEEEEeccCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcC--CeeccCCCCceeeeecC--CCCCEEEee
Q 042823 96 ETAVHVVMELCEGGDLFDRIIAK-GYNSERDAATVLRAIVNAVNVCHSMG--VMHRDLKPENFSFISRD--DNALLKVTD 170 (477)
Q Consensus 96 ~~~~~lv~e~~~gg~L~~~l~~~-~~~~~~~~~~i~~qil~~L~~lH~~~--ivH~dlkp~Nil~~~~~--~~~~~kl~D 170 (477)
.. ++||||++||+|.+.+... ..+++..+..++.|++.||.|||++| |+||||||+||++...+ ....+||+|
T Consensus 95 ~~--~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~ivH~dikp~Nil~~~~~~~~~~~~kl~D 172 (287)
T 4f0f_A 95 PP--RMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVAD 172 (287)
T ss_dssp TT--EEEEECCTTCBHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHTSSSCCBCSCCSGGGEEESCCCTTCSCCEEECC
T ss_pred CC--eEEEEecCCCCHHHHHhcccCCccHHHHHHHHHHHHHHHHHHHhCCCCeecCCCCcceEEEeccCCCCceeEEeCC
Confidence 66 6999999999999988765 46899999999999999999999999 99999999999993221 122399999
Q ss_pred cCCccccCCCcceecccccccccchhhhh---hhcCCccchHhHHHHHHHHhhCCCCCCCCChhhH--HHHHHcCCccCC
Q 042823 171 FGSALLFEEGQVYRDIVGSGFYIAPEVLR---RRYGKEIDIWSAGVILYILLSGVPPFWAETKKGT--YDAILQGEIDFD 245 (477)
Q Consensus 171 fg~a~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~--~~~i~~~~~~~~ 245 (477)
||++..... ......||+.|+|||++. ..++.++|||||||++|+|++|..||........ ...+..... .
T Consensus 173 fg~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~--~ 248 (287)
T 4f0f_A 173 FGLSQQSVH--SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGL--R 248 (287)
T ss_dssp CTTCBCCSS--CEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHHHHHHHHHSCC--C
T ss_pred CCccccccc--cccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHHHHHHHHhccCC--C
Confidence 999975543 334568999999999983 3578899999999999999999999987654443 333333322 2
Q ss_pred CCCCCCCCHHHHHHHHHhcccCccccCCHHHHhc
Q 042823 246 TDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLE 279 (477)
Q Consensus 246 ~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~ 279 (477)
....+.+|+.+.++|.+||+.||.+|||+.++++
T Consensus 249 ~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 282 (287)
T 4f0f_A 249 PTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVK 282 (287)
T ss_dssp CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred CCCCcccCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence 2233578999999999999999999999999985
|
| >2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-46 Score=360.35 Aligned_cols=256 Identities=19% Similarity=0.263 Sum_probs=218.6
Q ss_pred cccccccccccccccccccCCeEEEEEEEc-----cCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEE
Q 042823 16 KAYEDVMLHYFFGRMLGRGQFGVSYLCTEN-----STNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFK 90 (477)
Q Consensus 16 ~~~~~~~~~Y~~~~~iG~G~~g~V~~~~~~-----~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~ 90 (477)
..++...++|.+.+.||+|+||.||+|.+. .+++.||+|++.... .......+.+|+.++..+ +||||++++
T Consensus 16 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l-~hp~iv~~~ 92 (314)
T 2ivs_A 16 PKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENA--SPSELRDLLSEFNVLKQV-NHPHVIKLY 92 (314)
T ss_dssp TTTBCCGGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTC--CHHHHHHHHHHHHHHTTC-CCTTBCCEE
T ss_pred cccccchhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCC--CHHHHHHHHHHHHHHhhC-CCCceeeEE
Confidence 345566788999999999999999999883 455889999986442 334567788999999999 799999999
Q ss_pred EEEEeCCeEEEEEeccCCCchHHHHHHcCC------------------------CCHHHHHHHHHHHHHHHHHHHHcCCe
Q 042823 91 STYEDETAVHVVMELCEGGDLFDRIIAKGY------------------------NSERDAATVLRAIVNAVNVCHSMGVM 146 (477)
Q Consensus 91 ~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~------------------------~~~~~~~~i~~qil~~L~~lH~~~iv 146 (477)
+++...+.+|+|||||+||+|.+++..... +++.++..++.||+.||.|||++||+
T Consensus 93 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iv 172 (314)
T 2ivs_A 93 GACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLV 172 (314)
T ss_dssp EEECSSSSCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred EEEecCCceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHCCCc
Confidence 999999999999999999999999987543 78999999999999999999999999
Q ss_pred eccCCCCceeeeecCCCCCEEEeecCCccccCCCcc---eecccccccccchhhhhh-hcCCccchHhHHHHHHHHhh-C
Q 042823 147 HRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQV---YRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLS-G 221 (477)
Q Consensus 147 H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~t-g 221 (477)
||||||+||++ +.++.+||+|||++........ .....+|+.|+|||++.+ .++.++|||||||++|+|++ |
T Consensus 173 H~dikp~NIli---~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g 249 (314)
T 2ivs_A 173 HRDLAARNILV---AEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLG 249 (314)
T ss_dssp CCCCSGGGEEE---ETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTS
T ss_pred ccccchheEEE---cCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCC
Confidence 99999999999 6778899999999986644322 123457888999999875 58999999999999999999 9
Q ss_pred CCCCCCCChhhHHHHHHcCCccCCCCCCCCCCHHHHHHHHHhcccCccccCCHHHHhcC
Q 042823 222 VPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEH 280 (477)
Q Consensus 222 ~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h 280 (477)
..||.+.........+..+... ...+.+++.+.++|.+||+.||++|||+.+++++
T Consensus 250 ~~p~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~ 305 (314)
T 2ivs_A 250 GNPYPGIPPERLFNLLKTGHRM---ERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKD 305 (314)
T ss_dssp CCSSTTCCGGGHHHHHHTTCCC---CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred CCCCCCCCHHHHHHHhhcCCcC---CCCccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 9999988888777777665422 2235789999999999999999999999999864
|
| >3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-46 Score=371.30 Aligned_cols=256 Identities=21% Similarity=0.307 Sum_probs=217.0
Q ss_pred ccccccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEE
Q 042823 15 GKAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYE 94 (477)
Q Consensus 15 ~~~~~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~ 94 (477)
...+..-.++|.+.+.||+|+||.||+|.++.+++.||+|++.... .......+.+|+.++..+ +||||+++++++.
T Consensus 106 ~~~~~~~~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~ 182 (377)
T 3cbl_A 106 KDKWVLNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETL--PPDLKAKFLQEARILKQY-SHPNIVRLIGVCT 182 (377)
T ss_dssp CCTTBCCGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTS--CHHHHTTTTHHHHHHTTC-CCTTBCCEEEEEC
T ss_pred ccccEEchHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccC--CHHHHHHHHHHHHHHHhC-CCCCEEEEEEEEe
Confidence 4455566789999999999999999999999999999999986432 233445678899999999 7999999999999
Q ss_pred eCCeEEEEEeccCCCchHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCC
Q 042823 95 DETAVHVVMELCEGGDLFDRIIAKG-YNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGS 173 (477)
Q Consensus 95 ~~~~~~lv~e~~~gg~L~~~l~~~~-~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~ 173 (477)
....+|+|||||+||+|.+++...+ .+++..+..++.|++.||.|||++||+||||||+||++ +.++.+||+|||+
T Consensus 183 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nil~---~~~~~~kl~DfG~ 259 (377)
T 3cbl_A 183 QKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLV---TEKNVLKISDFGM 259 (377)
T ss_dssp SSSSCEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE---CTTCCEEECCGGG
T ss_pred cCCCcEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcCCcccCHHHEEE---cCCCcEEECcCCC
Confidence 9999999999999999999998754 58999999999999999999999999999999999999 7788999999999
Q ss_pred ccccCCCccee---cccccccccchhhhh-hhcCCccchHhHHHHHHHHhh-CCCCCCCCChhhHHHHHHcCCccCCCCC
Q 042823 174 ALLFEEGQVYR---DIVGSGFYIAPEVLR-RRYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQGEIDFDTDP 248 (477)
Q Consensus 174 a~~~~~~~~~~---~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~l~t-g~~pf~~~~~~~~~~~i~~~~~~~~~~~ 248 (477)
+.......... ...+++.|+|||++. +.++.++|||||||++|+|+| |..||.+.........+..+... + .
T Consensus 260 s~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~-~--~ 336 (377)
T 3cbl_A 260 SREEADGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFVEKGGRL-P--C 336 (377)
T ss_dssp CEECTTSEEECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHHHHHHHHHTTCCC-C--C
T ss_pred ceecCCCceeecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCC-C--C
Confidence 97654332211 123567899999987 468999999999999999998 99999988877776666654321 1 2
Q ss_pred CCCCCHHHHHHHHHhcccCccccCCHHHHhc
Q 042823 249 WPSISSTAKDLVRRMLTKDPKRRITAAQVLE 279 (477)
Q Consensus 249 ~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~ 279 (477)
...+|+.+.++|.+||+.||++|||+.++++
T Consensus 337 ~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~ 367 (377)
T 3cbl_A 337 PELCPDAVFRLMEQCWAYEPGQRPSFSTIYQ 367 (377)
T ss_dssp CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred CCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence 2457899999999999999999999999875
|
| >2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-46 Score=365.05 Aligned_cols=250 Identities=18% Similarity=0.184 Sum_probs=206.7
Q ss_pred cccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeE
Q 042823 20 DVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAV 99 (477)
Q Consensus 20 ~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~ 99 (477)
.+.++|++.+.||+|+||.||+|.+..+++.||+|++..... ...+.+|+.++..+.+||||+++++++......
T Consensus 6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-----~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~ 80 (330)
T 2izr_A 6 MVGPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR-----APQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYN 80 (330)
T ss_dssp EETTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS-----SCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEE
T ss_pred EEcCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccc-----hHHHHHHHHHHHHhhCCCCCCEEEEEEecCCcc
Confidence 355789999999999999999999999999999999875432 124778999999997899999999999999999
Q ss_pred EEEEeccCCCchHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCC-----EEEeecCC
Q 042823 100 HVVMELCEGGDLFDRIIA-KGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNAL-----LKVTDFGS 173 (477)
Q Consensus 100 ~lv~e~~~gg~L~~~l~~-~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~-----~kl~Dfg~ 173 (477)
|+||||+ |++|.+++.. .+.+++..+..++.||+.||.|||++||+||||||+||++ +..+. +||+|||+
T Consensus 81 ~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill---~~~~~~~~~~~kl~DFg~ 156 (330)
T 2izr_A 81 AMVLELL-GPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLI---GRPGNKTQQVIHIIDFAL 156 (330)
T ss_dssp EEEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE---CCGGGTCTTSEEECCCTT
T ss_pred EEEEEeC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeee---ccCCCCCCceEEEEEccc
Confidence 9999999 8999999987 4679999999999999999999999999999999999999 44444 99999999
Q ss_pred ccccCCCcc--------eecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChhh---HHHHHHcCC
Q 042823 174 ALLFEEGQV--------YRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKG---TYDAILQGE 241 (477)
Q Consensus 174 a~~~~~~~~--------~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~---~~~~i~~~~ 241 (477)
+........ .....||+.|+|||++.+ .++.++|||||||++|+|++|..||.+..... .+..+....
T Consensus 157 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~ 236 (330)
T 2izr_A 157 AKEYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTK 236 (330)
T ss_dssp CEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHHHHHHHHHHH
T ss_pred ceeeecCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccHHHHHHHHHhhh
Confidence 986543221 235689999999999875 58999999999999999999999998754433 333443332
Q ss_pred ccCCCCCC-CCCCHHHHHHHHHhcccCccccCCHHHHhc
Q 042823 242 IDFDTDPW-PSISSTAKDLVRRMLTKDPKRRITAAQVLE 279 (477)
Q Consensus 242 ~~~~~~~~-~~~~~~~~~li~~~l~~dp~~R~s~~~~l~ 279 (477)
...+.... ..+| ++.+++..||+.||.+||++.++++
T Consensus 237 ~~~~~~~~~~~~p-~~~~li~~~l~~~p~~RP~~~~l~~ 274 (330)
T 2izr_A 237 RATPIEVLCENFP-EMATYLRYVRRLDFFEKPDYDYLRK 274 (330)
T ss_dssp HHSCHHHHTTTCH-HHHHHHHHHHHCCTTCCCCHHHHHH
T ss_pred ccCCHHHHhccCh-HHHHHHHHHHhCCCCCCCCHHHHHH
Confidence 22221111 1234 9999999999999999999999875
|
| >1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-46 Score=353.36 Aligned_cols=254 Identities=23% Similarity=0.288 Sum_probs=204.9
Q ss_pred ccccccccccccccccccCCeEEEEEEEccC---CceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEE
Q 042823 17 AYEDVMLHYFFGRMLGRGQFGVSYLCTENST---NRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTY 93 (477)
Q Consensus 17 ~~~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~---~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~ 93 (477)
.++...++|++.+.||+|+||.||+|.+..+ +..||+|++.... .......+.+|+.++..+ +||||+++++++
T Consensus 9 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~ 85 (281)
T 1mp8_A 9 DYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCT--SDSVREKFLQEALTMRQF-DHPHIVKLIGVI 85 (281)
T ss_dssp CCBCCGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTT--SHHHHHHHHHHHHHHHTC-CCTTBCCEEEEE
T ss_pred ceEEehHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccC--CHHHHHHHHHHHHHHHhC-CCCccceEEEEE
Confidence 4566778999999999999999999998654 4569999875432 234556788999999999 799999999998
Q ss_pred EeCCeEEEEEeccCCCchHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecC
Q 042823 94 EDETAVHVVMELCEGGDLFDRIIAKG-YNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFG 172 (477)
Q Consensus 94 ~~~~~~~lv~e~~~gg~L~~~l~~~~-~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg 172 (477)
. ++..|+||||+++|+|.+++...+ .+++..+..++.|++.||.|||++||+||||||+||++ +.++.+||+|||
T Consensus 86 ~-~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~---~~~~~~kl~Dfg 161 (281)
T 1mp8_A 86 T-ENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLV---SSNDCVKLGDFG 161 (281)
T ss_dssp C-SSSCEEEEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE---EETTEEEECC--
T ss_pred c-cCccEEEEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHEEE---CCCCCEEECccc
Confidence 5 567899999999999999998754 68999999999999999999999999999999999999 556789999999
Q ss_pred CccccCCCcc--eecccccccccchhhhhh-hcCCccchHhHHHHHHHHhh-CCCCCCCCChhhHHHHHHcCCccCCCCC
Q 042823 173 SALLFEEGQV--YRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQGEIDFDTDP 248 (477)
Q Consensus 173 ~a~~~~~~~~--~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~t-g~~pf~~~~~~~~~~~i~~~~~~~~~~~ 248 (477)
++........ .....+|+.|+|||++.+ .++.++|||||||++|+|++ |.+||.+.........+..+... +.
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~~~~~i~~~~~~---~~ 238 (281)
T 1mp8_A 162 LSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERL---PM 238 (281)
T ss_dssp -----------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCC---CC
T ss_pred cccccCcccccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHHHHHHHHcCCCC---CC
Confidence 9987644322 223456788999999874 68899999999999999996 99999988888888777765432 22
Q ss_pred CCCCCHHHHHHHHHhcccCccccCCHHHHhcC
Q 042823 249 WPSISSTAKDLVRRMLTKDPKRRITAAQVLEH 280 (477)
Q Consensus 249 ~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h 280 (477)
.+.+|+.+.++|.+||+.||++|||+.+++++
T Consensus 239 ~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~ 270 (281)
T 1mp8_A 239 PPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQ 270 (281)
T ss_dssp CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred CCCCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 35789999999999999999999999999763
|
| >2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-46 Score=366.58 Aligned_cols=266 Identities=25% Similarity=0.357 Sum_probs=215.7
Q ss_pred ccccccccccccccccccccccCCeEEEEEEEccCC-ceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCC------
Q 042823 13 ILGKAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTN-RPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPN------ 85 (477)
Q Consensus 13 ~~~~~~~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~-~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpn------ 85 (477)
...+..+.+.++|++.+.||+|+||+||+|.+..++ +.||+|++... ......+.+|+.++..+. |++
T Consensus 9 ~~~~~g~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~-~~~~~~~~~ 83 (355)
T 2eu9_A 9 LVCRIGDWLQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNV----GKYREAARLEINVLKKIK-EKDKENKFL 83 (355)
T ss_dssp BCCCTTCEETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSC----HHHHHHHHHHHHHHHHHH-HHCTTSCSC
T ss_pred cccccCceecccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEccc----ccchhHHHHHHHHHHHHh-hcCCCCcee
Confidence 344566778899999999999999999999998777 68999998643 234566788999888884 444
Q ss_pred eeEEEEEEEeCCeEEEEEeccCCCchHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeec---
Q 042823 86 VVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKG--YNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISR--- 160 (477)
Q Consensus 86 iv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~--~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~--- 160 (477)
++.+++++...+.+|+||||+ +++|.+++.... .+++.++..++.||+.||.|||++||+||||||+||++...
T Consensus 84 ~~~~~~~~~~~~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~~~ 162 (355)
T 2eu9_A 84 CVLMSDWFNFHGHMCIAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFE 162 (355)
T ss_dssp BCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEESCCCEE
T ss_pred EEEeeeeeeeCCeEEEEEecc-CCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEeccccc
Confidence 999999999999999999999 567878887654 68999999999999999999999999999999999998432
Q ss_pred -------------CCCCCEEEeecCCccccCCCcceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCC
Q 042823 161 -------------DDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFW 226 (477)
Q Consensus 161 -------------~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~ 226 (477)
...+.+||+|||++...... .....||+.|+|||++.+ .++.++|||||||++|+|++|.+||.
T Consensus 163 ~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~ 240 (355)
T 2eu9_A 163 TLYNEHKSCEEKSVKNTSIRVADFGSATFDHEH--HTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQ 240 (355)
T ss_dssp EEECCC-CCCEEEESCCCEEECCCTTCEETTSC--CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCC
T ss_pred ccccccccccccccCCCcEEEeecCcccccccc--ccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCC
Confidence 24678999999999865432 245689999999999864 68999999999999999999999998
Q ss_pred CCChhhHHHHHHcCCccCCC----------------CCC------------------------CCCCHHHHHHHHHhccc
Q 042823 227 AETKKGTYDAILQGEIDFDT----------------DPW------------------------PSISSTAKDLVRRMLTK 266 (477)
Q Consensus 227 ~~~~~~~~~~i~~~~~~~~~----------------~~~------------------------~~~~~~~~~li~~~l~~ 266 (477)
..........+.......+. ..| ...+..+.+||.+||+.
T Consensus 241 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~ 320 (355)
T 2eu9_A 241 THENREHLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEF 320 (355)
T ss_dssp CSSHHHHHHHHHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCS
T ss_pred CCCHHHHHHHHHHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcC
Confidence 87766554443321111100 001 11245788999999999
Q ss_pred CccccCCHHHHhcCcccCcC
Q 042823 267 DPKRRITAAQVLEHPWLRES 286 (477)
Q Consensus 267 dp~~R~s~~~~l~h~~~~~~ 286 (477)
||++|||+.++|+||||+..
T Consensus 321 dP~~Rpt~~e~l~hp~f~~~ 340 (355)
T 2eu9_A 321 DPAQRITLAEALLHPFFAGL 340 (355)
T ss_dssp STTTSCCHHHHTTSGGGGGC
T ss_pred ChhhCcCHHHHhcChhhcCC
Confidence 99999999999999999865
|
| >1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-46 Score=357.70 Aligned_cols=257 Identities=19% Similarity=0.252 Sum_probs=210.8
Q ss_pred ccccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeC
Q 042823 17 AYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDE 96 (477)
Q Consensus 17 ~~~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~ 96 (477)
....+.++|++.+.||+|+||.||+|.+..+++.||+|++..... ...+.+|+.++..+.+|||++++++++...
T Consensus 4 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-----~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~ 78 (298)
T 1csn_A 4 QNNVVGVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSD-----APQLRDEYRTYKLLAGCTGIPNVYYFGQEG 78 (298)
T ss_dssp --CEETTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTT-----SCCHHHHHHHHHHTTTCTTCCCEEEEEEET
T ss_pred cCcccccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCCc-----cHHHHHHHHHHHHHhcCCCCCeEEeecCCC
Confidence 445677899999999999999999999999999999999865432 234678999999998899999999999999
Q ss_pred CeEEEEEeccCCCchHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecC--CCCCEEEeecCC
Q 042823 97 TAVHVVMELCEGGDLFDRIIAKG-YNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRD--DNALLKVTDFGS 173 (477)
Q Consensus 97 ~~~~lv~e~~~gg~L~~~l~~~~-~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~--~~~~~kl~Dfg~ 173 (477)
...|+||||+ |++|.+++...+ .+++..+..++.||+.||.|||++||+||||||+||++...+ ....+||+|||+
T Consensus 79 ~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~ 157 (298)
T 1csn_A 79 LHNVLVIDLL-GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGM 157 (298)
T ss_dssp TEEEEEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSSSTTTTCEEECCCTT
T ss_pred ceeEEEEEec-CCCHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEeccCCCCCCCeEEEEECcc
Confidence 9999999999 899999998754 599999999999999999999999999999999999994321 223499999999
Q ss_pred ccccCCCcc--------eecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCC---hhhHHHHHHcCC
Q 042823 174 ALLFEEGQV--------YRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAET---KKGTYDAILQGE 241 (477)
Q Consensus 174 a~~~~~~~~--------~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~---~~~~~~~i~~~~ 241 (477)
+........ .....||+.|+|||++.+ .++.++|||||||++|+|++|..||.+.. .......+....
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~ 237 (298)
T 1csn_A 158 VKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKK 237 (298)
T ss_dssp CEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHH
T ss_pred ccccccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHHhhc
Confidence 987644321 244579999999999875 58999999999999999999999998753 233333333322
Q ss_pred ccCC-CCCCCCCCHHHHHHHHHhcccCccccCCHHHHhc
Q 042823 242 IDFD-TDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLE 279 (477)
Q Consensus 242 ~~~~-~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~ 279 (477)
...+ ....+.+|+++.+++.+||+.||++|||+.++++
T Consensus 238 ~~~~~~~~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~ 276 (298)
T 1csn_A 238 QSTPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQG 276 (298)
T ss_dssp HHSCHHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHH
T ss_pred cCccHHHHHhhCcHHHHHHHHHHhcCCcccCCCHHHHHH
Confidence 2111 1112468999999999999999999999999875
|
| >3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-46 Score=351.09 Aligned_cols=253 Identities=24% Similarity=0.370 Sum_probs=202.0
Q ss_pred ccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccc-hhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeE
Q 042823 21 VMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMR-LAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAV 99 (477)
Q Consensus 21 ~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~ 99 (477)
-.++|++.+.||+|+||.||+|.+. ++.||+|++....... ......+.+|+.++..+ +||||+++++++...+..
T Consensus 5 ~~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~ 81 (271)
T 3dtc_A 5 DFAELTLEEIIGIGGFGKVYRAFWI--GDEVAVKAARHDPDEDISQTIENVRQEAKLFAML-KHPNIIALRGVCLKEPNL 81 (271)
T ss_dssp CTTSEEEEEEEEEETTEEEEEEEET--TEEEEEEEC----------CHHHHHHHHHHHHHC-CCTTBCCEEEEECCC--C
T ss_pred chhheeeeeeeccCCCeEEEEEEEc--CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhc-CCCCEeeEEEEEecCCce
Confidence 3568999999999999999999974 8899999986543222 23356788999999999 699999999999999999
Q ss_pred EEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcC---CeeccCCCCceeeeecC-----CCCCEEEeec
Q 042823 100 HVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMG---VMHRDLKPENFSFISRD-----DNALLKVTDF 171 (477)
Q Consensus 100 ~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~---ivH~dlkp~Nil~~~~~-----~~~~~kl~Df 171 (477)
|+||||++|++|.+++. .+.+++..+..++.|++.||.|||++| |+||||||+||++.... ..+.+||+||
T Consensus 82 ~lv~e~~~~~~L~~~~~-~~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Df 160 (271)
T 3dtc_A 82 CLVMEFARGGPLNRVLS-GKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDF 160 (271)
T ss_dssp EEEEECCTTEEHHHHHT-SSCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCC
T ss_pred EEEEEcCCCCCHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccC
Confidence 99999999999988774 567899999999999999999999999 89999999999994321 2678999999
Q ss_pred CCccccCCCcceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCC
Q 042823 172 GSALLFEEGQVYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWP 250 (477)
Q Consensus 172 g~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~ 250 (477)
|++........ ....||+.|+|||++.+ .++.++||||||+++|+|++|..||.+.........+.......+. ..
T Consensus 161 g~~~~~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~--~~ 237 (271)
T 3dtc_A 161 GLAREWHRTTK-MSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNKLALPI--PS 237 (271)
T ss_dssp CC--------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHHTSCCCCCC--CT
T ss_pred Ccccccccccc-cCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHhhhcCCCCCCC--Cc
Confidence 99986644332 34579999999999875 5889999999999999999999999988877777666665544332 24
Q ss_pred CCCHHHHHHHHHhcccCccccCCHHHHhcC
Q 042823 251 SISSTAKDLVRRMLTKDPKRRITAAQVLEH 280 (477)
Q Consensus 251 ~~~~~~~~li~~~l~~dp~~R~s~~~~l~h 280 (477)
.+++.+.++|.+||+.||.+|||+.+++++
T Consensus 238 ~~~~~~~~li~~~l~~~p~~Rps~~e~l~~ 267 (271)
T 3dtc_A 238 TCPEPFAKLMEDCWNPDPHSRPSFTNILDQ 267 (271)
T ss_dssp TCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred ccCHHHHHHHHHHhcCCcccCcCHHHHHHH
Confidence 689999999999999999999999999875
|
| >1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-46 Score=364.24 Aligned_cols=254 Identities=19% Similarity=0.261 Sum_probs=217.7
Q ss_pred cccccccccccccccccCCeEEEEEEEc-----cCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEE
Q 042823 18 YEDVMLHYFFGRMLGRGQFGVSYLCTEN-----STNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKST 92 (477)
Q Consensus 18 ~~~~~~~Y~~~~~iG~G~~g~V~~~~~~-----~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~ 92 (477)
.+...++|++++.||+|+||.||+|.+. .+++.||+|++.... .......+.+|+.++..+ +||||++++++
T Consensus 42 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~ 118 (343)
T 1luf_A 42 LEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEA--SADMQADFQREAALMAEF-DNPNIVKLLGV 118 (343)
T ss_dssp TBCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTC--CHHHHHHHHHHHHHHHTC-CCTTBCCEEEE
T ss_pred eEecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEecccc--CHHHHHHHHHHHHHHHhC-CCCCEEEEEEE
Confidence 3556789999999999999999999987 355899999986543 234456789999999999 79999999999
Q ss_pred EEeCCeEEEEEeccCCCchHHHHHHc------------------------CCCCHHHHHHHHHHHHHHHHHHHHcCCeec
Q 042823 93 YEDETAVHVVMELCEGGDLFDRIIAK------------------------GYNSERDAATVLRAIVNAVNVCHSMGVMHR 148 (477)
Q Consensus 93 ~~~~~~~~lv~e~~~gg~L~~~l~~~------------------------~~~~~~~~~~i~~qil~~L~~lH~~~ivH~ 148 (477)
+.+.+.+|+|||||+||+|.+++... ..+++.++..++.||+.||.|||++||+||
T Consensus 119 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~ 198 (343)
T 1luf_A 119 CAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHR 198 (343)
T ss_dssp ECSSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCS
T ss_pred EccCCceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecC
Confidence 99999999999999999999999874 568999999999999999999999999999
Q ss_pred cCCCCceeeeecCCCCCEEEeecCCccccCCCc---ceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhh-CCC
Q 042823 149 DLKPENFSFISRDDNALLKVTDFGSALLFEEGQ---VYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLS-GVP 223 (477)
Q Consensus 149 dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~t-g~~ 223 (477)
||||+||++ +.++.+||+|||++....... ......||+.|+|||++.+ .++.++|||||||++|+|+| |..
T Consensus 199 Dlkp~NIl~---~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~ 275 (343)
T 1luf_A 199 DLATRNCLV---GENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQ 275 (343)
T ss_dssp CCSGGGEEE---CGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCC
T ss_pred CCCcceEEE---CCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCC
Confidence 999999999 677899999999997653321 2234568899999999864 68999999999999999999 999
Q ss_pred CCCCCChhhHHHHHHcCCccCCCCCCCCCCHHHHHHHHHhcccCccccCCHHHHhcC
Q 042823 224 PFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEH 280 (477)
Q Consensus 224 pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h 280 (477)
||.+.........+..+..... .+.+++.+.++|.+||+.||++|||+.+++++
T Consensus 276 p~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~ 329 (343)
T 1luf_A 276 PYYGMAHEEVIYYVRDGNILAC---PENCPLELYNLMRLCWSKLPADRPSFCSIHRI 329 (343)
T ss_dssp TTTTSCHHHHHHHHHTTCCCCC---CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred cCCCCChHHHHHHHhCCCcCCC---CCCCCHHHHHHHHHHcccCcccCCCHHHHHHH
Confidence 9999888888877777654322 24688999999999999999999999999863
|
| >1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-46 Score=364.51 Aligned_cols=258 Identities=20% Similarity=0.295 Sum_probs=214.1
Q ss_pred ccccccccccccccccccCCeEEEEEEEc-----cCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEE
Q 042823 17 AYEDVMLHYFFGRMLGRGQFGVSYLCTEN-----STNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKS 91 (477)
Q Consensus 17 ~~~~~~~~Y~~~~~iG~G~~g~V~~~~~~-----~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~ 91 (477)
.++...++|.+.+.||+|+||.||+|.+. .++..||+|++.... .......+.+|+.++.++.+||||+++++
T Consensus 39 ~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~hp~iv~~~~ 116 (344)
T 1rjb_A 39 KWEFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKA--DSSEREALMSELKMMTQLGSHENIVNLLG 116 (344)
T ss_dssp GGBCCGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC--------CHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred CcccCHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEeccccc--CHHHHHHHHHHHHHHHhhcCCCCeeeEEE
Confidence 34556788999999999999999999973 456789999986432 22344678899999999977999999999
Q ss_pred EEEeCCeEEEEEeccCCCchHHHHHHcC-----------------------CCCHHHHHHHHHHHHHHHHHHHHcCCeec
Q 042823 92 TYEDETAVHVVMELCEGGDLFDRIIAKG-----------------------YNSERDAATVLRAIVNAVNVCHSMGVMHR 148 (477)
Q Consensus 92 ~~~~~~~~~lv~e~~~gg~L~~~l~~~~-----------------------~~~~~~~~~i~~qil~~L~~lH~~~ivH~ 148 (477)
++...+.+|+|||||+||+|.+++.... .+++..+..++.||+.||.|||++||+||
T Consensus 117 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~ 196 (344)
T 1rjb_A 117 ACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHR 196 (344)
T ss_dssp EECSSSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTTEEET
T ss_pred EEeeCCccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhCCcccC
Confidence 9999999999999999999999998653 27899999999999999999999999999
Q ss_pred cCCCCceeeeecCCCCCEEEeecCCccccCCCcc---eecccccccccchhhhhh-hcCCccchHhHHHHHHHHhh-CCC
Q 042823 149 DLKPENFSFISRDDNALLKVTDFGSALLFEEGQV---YRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLS-GVP 223 (477)
Q Consensus 149 dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~t-g~~ 223 (477)
||||+||++ +.++.+||+|||++........ .....||+.|+|||++.+ .++.++|||||||++|+|+| |..
T Consensus 197 Dikp~NIll---~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~ 273 (344)
T 1rjb_A 197 DLAARNVLV---THGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVN 273 (344)
T ss_dssp TCSGGGEEE---ETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCC
T ss_pred CCChhhEEE---cCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCC
Confidence 999999999 6778999999999976543321 233467889999999864 68999999999999999998 999
Q ss_pred CCCCCChhhHHHHHHcCCccCCCCCCCCCCHHHHHHHHHhcccCccccCCHHHHhcCc
Q 042823 224 PFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHP 281 (477)
Q Consensus 224 pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~ 281 (477)
||.+.........+.......+ ....+++.+.++|.+||..||.+|||+.++++|.
T Consensus 274 p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l 329 (344)
T 1rjb_A 274 PYPGIPVDANFYKLIQNGFKMD--QPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFL 329 (344)
T ss_dssp SSTTCCCSHHHHHHHHTTCCCC--CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred CcccCCcHHHHHHHHhcCCCCC--CCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHH
Confidence 9988776655555554433322 2246799999999999999999999999999864
|
| >1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-46 Score=358.39 Aligned_cols=259 Identities=22% Similarity=0.323 Sum_probs=217.7
Q ss_pred ccccccccccccccccccccCCeEEEEEEE-----ccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEE
Q 042823 15 GKAYEDVMLHYFFGRMLGRGQFGVSYLCTE-----NSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEF 89 (477)
Q Consensus 15 ~~~~~~~~~~Y~~~~~iG~G~~g~V~~~~~-----~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~ 89 (477)
...++...++|.+.+.||+|+||.||+|.+ ..+++.||+|++.... .......+.+|+.++.++.+||||+++
T Consensus 15 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~i~~~ 92 (313)
T 1t46_A 15 DHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSA--HLTEREALMSELKVLSYLGNHMNIVNL 92 (313)
T ss_dssp CGGGBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC--CHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred ccccccChhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcch--hHHHHHHHHHHHHHHhhcccCCCeeeE
Confidence 345566678999999999999999999985 4577899999986543 234557788999999999779999999
Q ss_pred EEEEEeCCeEEEEEeccCCCchHHHHHHcC------------------CCCHHHHHHHHHHHHHHHHHHHHcCCeeccCC
Q 042823 90 KSTYEDETAVHVVMELCEGGDLFDRIIAKG------------------YNSERDAATVLRAIVNAVNVCHSMGVMHRDLK 151 (477)
Q Consensus 90 ~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~------------------~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlk 151 (477)
++++...+..|+|||||+||+|.+++.... .+++..+..++.||+.||.|||++||+|||||
T Consensus 93 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlk 172 (313)
T 1t46_A 93 LGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLA 172 (313)
T ss_dssp EEEECSSSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCS
T ss_pred EEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCc
Confidence 999999999999999999999999998754 48999999999999999999999999999999
Q ss_pred CCceeeeecCCCCCEEEeecCCccccCCCcc---eecccccccccchhhhhh-hcCCccchHhHHHHHHHHhh-CCCCCC
Q 042823 152 PENFSFISRDDNALLKVTDFGSALLFEEGQV---YRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLS-GVPPFW 226 (477)
Q Consensus 152 p~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~t-g~~pf~ 226 (477)
|+||++ +.++.+||+|||++........ .....||+.|+|||++.+ .++.++|||||||++|+|+| |..||.
T Consensus 173 p~Nil~---~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~ 249 (313)
T 1t46_A 173 ARNILL---THGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYP 249 (313)
T ss_dssp GGGEEE---ETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSST
T ss_pred cceEEE---cCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCC
Confidence 999999 6778899999999987654332 223457889999999864 68999999999999999999 999998
Q ss_pred CCChhhHHHHHHcCCccCCCCCCCCCCHHHHHHHHHhcccCccccCCHHHHhcC
Q 042823 227 AETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEH 280 (477)
Q Consensus 227 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h 280 (477)
+................. ...+.+++.+.++|.+||+.||.+|||+.+++++
T Consensus 250 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~ 301 (313)
T 1t46_A 250 GMPVDSKFYKMIKEGFRM--LSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQL 301 (313)
T ss_dssp TCCSSHHHHHHHHHTCCC--CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred cccchhHHHHHhccCCCC--CCcccCCHHHHHHHHHHcCCCchhCcCHHHHHHH
Confidence 876655554444333222 2224689999999999999999999999999864
|
| >3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=8.3e-46 Score=352.05 Aligned_cols=253 Identities=21% Similarity=0.281 Sum_probs=219.1
Q ss_pred cccccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEe
Q 042823 16 KAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYED 95 (477)
Q Consensus 16 ~~~~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~ 95 (477)
..++...++|++.+.||+|+||.||+|.++.++..||+|++.... .....+.+|+.++..+ +||||+++++++.+
T Consensus 6 ~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~ 80 (288)
T 3kfa_A 6 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT----MEVEEFLKEAAVMKEI-KHPNLVQLLGVCTR 80 (288)
T ss_dssp CTTBCCGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCS----THHHHHHHHHHHHHHC-CCTTBCCEEEEECS
T ss_pred hcccccccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCH----HHHHHHHHHHHHHHhC-CCCCEeeEEEEEcc
Confidence 355667789999999999999999999999999999999986432 3456788999999999 69999999999999
Q ss_pred CCeEEEEEeccCCCchHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCC
Q 042823 96 ETAVHVVMELCEGGDLFDRIIAK--GYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGS 173 (477)
Q Consensus 96 ~~~~~lv~e~~~gg~L~~~l~~~--~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~ 173 (477)
...+|+||||++|++|.+++... ..+++..+..++.|++.||.|||++||+||||||+||++ +.++.+||+|||+
T Consensus 81 ~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~---~~~~~~~l~Dfg~ 157 (288)
T 3kfa_A 81 EPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLV---GENHLVKVADFGL 157 (288)
T ss_dssp SSSEEEEEECCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHHHTCCCSCCSGGGEEE---CGGGCEEECCCCG
T ss_pred CCCEEEEEEcCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHHCCccCCCCCcceEEE---cCCCCEEEccCcc
Confidence 99999999999999999999874 448999999999999999999999999999999999999 6778899999999
Q ss_pred ccccCCCcc--eecccccccccchhhhhh-hcCCccchHhHHHHHHHHhh-CCCCCCCCChhhHHHHHHcCCccCCCCCC
Q 042823 174 ALLFEEGQV--YRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQGEIDFDTDPW 249 (477)
Q Consensus 174 a~~~~~~~~--~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~t-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~ 249 (477)
+........ .....+|+.|+|||++.+ .++.++||||||+++|+|++ |.+||...........+...... ...
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~~~~~~~~~~~~---~~~ 234 (288)
T 3kfa_A 158 SRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRM---ERP 234 (288)
T ss_dssp GGTSCSSSSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTCCC---CCC
T ss_pred ceeccCCccccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhccCCC---CCC
Confidence 987654332 233457888999999874 68999999999999999999 99999888877777666654322 223
Q ss_pred CCCCHHHHHHHHHhcccCccccCCHHHHhc
Q 042823 250 PSISSTAKDLVRRMLTKDPKRRITAAQVLE 279 (477)
Q Consensus 250 ~~~~~~~~~li~~~l~~dp~~R~s~~~~l~ 279 (477)
+.+|+.+.+||.+||..||.+|||+.++++
T Consensus 235 ~~~~~~l~~li~~~l~~dp~~Rps~~~~~~ 264 (288)
T 3kfa_A 235 EGCPEKVYELMRACWQWNPSDRPSFAEIHQ 264 (288)
T ss_dssp TTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred CCCCHHHHHHHHHHhCCChhhCcCHHHHHH
Confidence 568999999999999999999999999975
|
| >3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-46 Score=376.20 Aligned_cols=275 Identities=27% Similarity=0.395 Sum_probs=199.1
Q ss_pred CCCCCCcCCCCCccc-cccccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHh
Q 042823 1 MGCSVSKNQRDPILG-KAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLY 79 (477)
Q Consensus 1 ~~~~~~~~~~~~~~~-~~~~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~ 79 (477)
||.+.+.++.+.-.. .....-..+|.+.+.||+|+||+|+. ....+++.||||++...... ...+|+.+++.
T Consensus 1 M~ss~s~~~~~~~~~~~~~~i~~~~y~~~~~LG~G~~G~V~~-~~~~~~~~vAvK~~~~~~~~------~~~~E~~~l~~ 73 (432)
T 3p23_A 1 MGSSPSLEQDDGDEETSVVIVGKISFCPKDVLGHGAEGTIVY-RGMFDNRDVAVKRILPECFS------FADREVQLLRE 73 (432)
T ss_dssp -----------------CEEETTEEEEEEEEEEECGGGCEEE-EEESSSSEEEEEEECTTTEE------ECHHHHHHHHH
T ss_pred CCCCcccccCcCcccCCcEEEccEEEecCCeeecCcCEEEEE-EEEeCCeEEEEEEECHHHHH------HHHHHHHHHHh
Confidence 777666655443222 22222334699999999999999764 34468899999998653221 24579999999
Q ss_pred ccCCCCeeEEEEEEEeCCeEEEEEeccCCCchHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeee
Q 042823 80 LSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKG-YNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFI 158 (477)
Q Consensus 80 l~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~-~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~ 158 (477)
+.+|||||++++++.+...+|+|||||. |+|.+++.... ..++..+..++.||+.||.|||++||+||||||+||++.
T Consensus 74 l~~HpnIv~l~~~~~~~~~~~lv~E~~~-g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NIll~ 152 (432)
T 3p23_A 74 SDEHPNVIRYFCTEKDRQFQYIAIELCA-ATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHSLNIVHRDLKPHNILIS 152 (432)
T ss_dssp SCCCTTBCCEEEEEEETTEEEEEEECCS-EEHHHHHHSSSCCCCSSCHHHHHHHHHHHHHHHHHTTCCCCCCSTTSEEEC
T ss_pred ccCCCCcCeEEEEEecCCEEEEEEECCC-CCHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHCcCEeCCCCHHHEEEe
Confidence 8779999999999999999999999996 59999998754 356667789999999999999999999999999999995
Q ss_pred ecC--CCCCEEEeecCCccccCCCc----ceecccccccccchhhhh----hhcCCccchHhHHHHHHHHhh-CCCCCCC
Q 042823 159 SRD--DNALLKVTDFGSALLFEEGQ----VYRDIVGSGFYIAPEVLR----RRYGKEIDIWSAGVILYILLS-GVPPFWA 227 (477)
Q Consensus 159 ~~~--~~~~~kl~Dfg~a~~~~~~~----~~~~~~gt~~y~aPE~~~----~~~~~~~DiwslG~il~~l~t-g~~pf~~ 227 (477)
..+ ....+||+|||+|....... .....+||+.|+|||++. ..++.++|||||||++|+|++ |.+||..
T Consensus 153 ~~~~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~ 232 (432)
T 3p23_A 153 MPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGK 232 (432)
T ss_dssp CCBTTTBCCEEECCTTEEECC------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBS
T ss_pred cCCCCCceeEEEecccceeeccCCCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcch
Confidence 332 33468899999998765332 234467999999999986 357789999999999999999 9999965
Q ss_pred CChhhHHHHHHcCCccCCC-CCCCCCCHHHHHHHHHhcccCccccCCHHHHhcCcccCc
Q 042823 228 ETKKGTYDAILQGEIDFDT-DPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRE 285 (477)
Q Consensus 228 ~~~~~~~~~i~~~~~~~~~-~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~ 285 (477)
....... . ..+...... .+....+..+++||.+||+.||.+|||+.++++||||..
T Consensus 233 ~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~hp~f~~ 289 (432)
T 3p23_A 233 SLQRQAN-I-LLGACSLDCLHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLKHPFFWS 289 (432)
T ss_dssp TTTHHHH-H-HTTCCCCTTSCTTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHTSTTTCC
T ss_pred hhHHHHH-H-HhccCCccccCccccccHHHHHHHHHHHhCCHhhCCCHHHHHhCccccC
Confidence 5443322 2 222222211 111234567899999999999999999999999999975
|
| >2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-46 Score=362.65 Aligned_cols=260 Identities=30% Similarity=0.532 Sum_probs=204.5
Q ss_pred ccccccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccch---hhHHHHHHHHHHHHhcc---CCCCeeE
Q 042823 15 GKAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRL---AENDMIRREIQIRLYLS---GQPNVVE 88 (477)
Q Consensus 15 ~~~~~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~---~~~~~~~~e~~~~~~l~---~hpniv~ 88 (477)
.+..+.+.++|++.+.||+|+||.||+|.++.+++.||+|++........ .....+.+|+.++.++. +||||++
T Consensus 23 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~ 102 (312)
T 2iwi_A 23 GKDREAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIR 102 (312)
T ss_dssp ----------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCC
T ss_pred ccchhhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeee
Confidence 45678889999999999999999999999999999999999865432211 12233557888888874 6999999
Q ss_pred EEEEEEeCCeEEEEEec-cCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEE
Q 042823 89 FKSTYEDETAVHVVMEL-CEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLK 167 (477)
Q Consensus 89 ~~~~~~~~~~~~lv~e~-~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~k 167 (477)
+++++...+..++|||+ +.+++|.+++...+.+++..+..++.||+.||.|||++||+||||||+||++. ..++.+|
T Consensus 103 ~~~~~~~~~~~~~v~e~~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~--~~~~~~k 180 (312)
T 2iwi_A 103 LLDWFETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDENILID--LRRGCAK 180 (312)
T ss_dssp EEEEC-----CEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHHTEECCCCSGGGEEEE--TTTTEEE
T ss_pred EEEEEecCCeEEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChhhEEEe--CCCCeEE
Confidence 99999999999999999 78999999999988899999999999999999999999999999999999992 1677899
Q ss_pred EeecCCccccCCCcceecccccccccchhhhhh-hc-CCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCC
Q 042823 168 VTDFGSALLFEEGQVYRDIVGSGFYIAPEVLRR-RY-GKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFD 245 (477)
Q Consensus 168 l~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~-~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~ 245 (477)
|+|||++....... .....||+.|+|||++.+ .+ +.++|||||||++|+|++|..||... ..+......++
T Consensus 181 l~dfg~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~------~~~~~~~~~~~ 253 (312)
T 2iwi_A 181 LIDFGSGALLHDEP-YTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERD------QEILEAELHFP 253 (312)
T ss_dssp ECCCSSCEECCSSC-BCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSH------HHHHHTCCCCC
T ss_pred EEEcchhhhcccCc-ccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCCh------HHHhhhccCCc
Confidence 99999998765433 345679999999999865 34 45899999999999999999999642 12333333322
Q ss_pred CCCCCCCCHHHHHHHHHhcccCccccCCHHHHhcCcccCcCC
Q 042823 246 TDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESG 287 (477)
Q Consensus 246 ~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~~ 287 (477)
+.+++.+.++|.+||+.||++|||+.++++||||+...
T Consensus 254 ----~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~~~~~~~~ 291 (312)
T 2iwi_A 254 ----AHVSPDCCALIRRCLAPKPSSRPSLEEILLDPWMQTPA 291 (312)
T ss_dssp ----TTSCHHHHHHHHHHTCSSTTTSCCHHHHHHSTTTCC--
T ss_pred ----ccCCHHHHHHHHHHccCChhhCcCHHHHhcChhhcCch
Confidence 46899999999999999999999999999999998754
|
| >1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=7.9e-46 Score=358.04 Aligned_cols=261 Identities=19% Similarity=0.258 Sum_probs=222.1
Q ss_pred CCccccccccccccccccccccccCCeEEEEEEEc-----cCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCC
Q 042823 11 DPILGKAYEDVMLHYFFGRMLGRGQFGVSYLCTEN-----STNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPN 85 (477)
Q Consensus 11 ~~~~~~~~~~~~~~Y~~~~~iG~G~~g~V~~~~~~-----~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpn 85 (477)
+-+....++...++|++.+.||+|+||.||+|.++ .+++.||+|++.... .......+.+|+.++..+ +|||
T Consensus 13 ~~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l-~h~~ 89 (322)
T 1p4o_A 13 DVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAA--SMRERIEFLNEASVMKEF-NCHH 89 (322)
T ss_dssp SCCCCCTTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTS--CHHHHHHHHHHHHHGGGC-CCTT
T ss_pred cccChhhhcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEeccccc--CHHHHHHHHHHHHHHHhc-CCCC
Confidence 33445677788899999999999999999999886 467889999986443 234456788999999999 7999
Q ss_pred eeEEEEEEEeCCeEEEEEeccCCCchHHHHHHc----------CCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCce
Q 042823 86 VVEFKSTYEDETAVHVVMELCEGGDLFDRIIAK----------GYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENF 155 (477)
Q Consensus 86 iv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~----------~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Ni 155 (477)
|+++++++.+....|+|||||+||+|.+++... ..+++..+..++.||+.||.|||++||+||||||+||
T Consensus 90 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~NI 169 (322)
T 1p4o_A 90 VVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNC 169 (322)
T ss_dssp BCCEEEEECSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCSGGGE
T ss_pred EeeeEEEEccCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHCCCccCCCccceE
Confidence 999999999999999999999999999999753 3568999999999999999999999999999999999
Q ss_pred eeeecCCCCCEEEeecCCccccCCCcc---eecccccccccchhhhhh-hcCCccchHhHHHHHHHHhh-CCCCCCCCCh
Q 042823 156 SFISRDDNALLKVTDFGSALLFEEGQV---YRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLS-GVPPFWAETK 230 (477)
Q Consensus 156 l~~~~~~~~~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~t-g~~pf~~~~~ 230 (477)
++ +.++.+||+|||++........ .....||+.|+|||++.+ .++.++|||||||++|+|++ |..||.+...
T Consensus 170 li---~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~ 246 (322)
T 1p4o_A 170 MV---AEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSN 246 (322)
T ss_dssp EE---CTTCCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCH
T ss_pred EE---cCCCeEEECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCH
Confidence 99 7788999999999976543322 123456889999999875 58999999999999999999 8999988888
Q ss_pred hhHHHHHHcCCccCCCCCCCCCCHHHHHHHHHhcccCccccCCHHHHhcC
Q 042823 231 KGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEH 280 (477)
Q Consensus 231 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h 280 (477)
......+..+.... ..+.+++.+.++|.+||+.||.+|||+.++++|
T Consensus 247 ~~~~~~~~~~~~~~---~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~ 293 (322)
T 1p4o_A 247 EQVLRFVMEGGLLD---KPDNCPDMLFELMRMCWQYNPKMRPSFLEIISS 293 (322)
T ss_dssp HHHHHHHHTTCCCC---CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHHHHHcCCcCC---CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 77777777654322 224689999999999999999999999999976
|
| >1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-46 Score=361.65 Aligned_cols=250 Identities=21% Similarity=0.276 Sum_probs=210.5
Q ss_pred ccccccccccccCCeEEEEEEEccCCceE--EEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEE
Q 042823 23 LHYFFGRMLGRGQFGVSYLCTENSTNRPY--ACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVH 100 (477)
Q Consensus 23 ~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~--aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~ 100 (477)
++|++.+.||+|+||.||+|.++.++..+ |+|.+.... .......+.+|+.++.++.+||||+++++++.+.+.+|
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~--~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~ 102 (327)
T 1fvr_A 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYA--SKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLY 102 (327)
T ss_dssp GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC--------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEE
T ss_pred HHccceeeeecCCCceEEEEEEccCCcccceeeeeecccc--chHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceE
Confidence 68999999999999999999999888865 999886432 22344568899999999977999999999999999999
Q ss_pred EEEeccCCCchHHHHHHcC----------------CCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCC
Q 042823 101 VVMELCEGGDLFDRIIAKG----------------YNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNA 164 (477)
Q Consensus 101 lv~e~~~gg~L~~~l~~~~----------------~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~ 164 (477)
+||||++||+|.+++.... .+++..++.++.||+.||.|||++||+||||||+||++ +.++
T Consensus 103 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~---~~~~ 179 (327)
T 1fvr_A 103 LAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILV---GENY 179 (327)
T ss_dssp EEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE---CGGG
T ss_pred EEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCccCCCCccceEEE---cCCC
Confidence 9999999999999998654 68999999999999999999999999999999999999 6778
Q ss_pred CEEEeecCCccccCCCcceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhh-CCCCCCCCChhhHHHHHHcCCc
Q 042823 165 LLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQGEI 242 (477)
Q Consensus 165 ~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~t-g~~pf~~~~~~~~~~~i~~~~~ 242 (477)
.+||+|||++.............+++.|+|||++.+ .++.++|||||||++|+|+| |..||.+.........+..+..
T Consensus 180 ~~kL~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~~~~~~~~ 259 (327)
T 1fvr_A 180 VAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYR 259 (327)
T ss_dssp CEEECCTTCEESSCEECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHGGGTCC
T ss_pred eEEEcccCcCccccccccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcHHHHHHHhhcCCC
Confidence 899999999875433222334467889999999875 58999999999999999998 9999998887777766655422
Q ss_pred cCCCCCCCCCCHHHHHHHHHhcccCccccCCHHHHhcC
Q 042823 243 DFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEH 280 (477)
Q Consensus 243 ~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h 280 (477)
......+++.+.++|.+||+.||.+|||+.+++++
T Consensus 260 ---~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~ 294 (327)
T 1fvr_A 260 ---LEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVS 294 (327)
T ss_dssp ---CCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred ---CCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 12234689999999999999999999999999875
|
| >2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-45 Score=353.39 Aligned_cols=255 Identities=26% Similarity=0.436 Sum_probs=203.9
Q ss_pred ccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCe
Q 042823 19 EDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETA 98 (477)
Q Consensus 19 ~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~ 98 (477)
....++|++.+.||+|+||.||+|.+..+++.||+|++.............+.+|+.++..+ +||||+++++++...+.
T Consensus 28 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~ 106 (310)
T 2wqm_A 28 YNTLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQL-NHPNVIKYYASFIEDNE 106 (310)
T ss_dssp TSSGGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTC-CCTTBCCEEEEEEETTE
T ss_pred cccccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhC-CCCCEeeEEEEEEcCCc
Confidence 34567899999999999999999999999999999999765444555667888999999999 79999999999999999
Q ss_pred EEEEEeccCCCchHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCc
Q 042823 99 VHVVMELCEGGDLFDRIIA----KGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSA 174 (477)
Q Consensus 99 ~~lv~e~~~gg~L~~~l~~----~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a 174 (477)
+++||||+++|+|.+++.. ...+++..++.++.|++.||.|||++|++||||||+||++ +.++.+||+|||++
T Consensus 107 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIl~---~~~~~~kl~Dfg~~ 183 (310)
T 2wqm_A 107 LNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFI---TATGVVKLGDLGLG 183 (310)
T ss_dssp EEEEEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE---CTTSCEEECCC---
T ss_pred EEEEEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCcHHHEEE---cCCCCEEEEeccce
Confidence 9999999999999998875 4568999999999999999999999999999999999999 77889999999998
Q ss_pred cccCCCc-ceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCCh--hhHHHHHHcCCccCCCCCCC
Q 042823 175 LLFEEGQ-VYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETK--KGTYDAILQGEIDFDTDPWP 250 (477)
Q Consensus 175 ~~~~~~~-~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~--~~~~~~i~~~~~~~~~~~~~ 250 (477)
....... ......||+.|+|||++.+ .++.++||||||+++|+|++|..||.+... ......+..... +.....
T Consensus 184 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~ 261 (310)
T 2wqm_A 184 RFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDY--PPLPSD 261 (310)
T ss_dssp ---------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CCHHHHHHHHHTTCS--CCCCTT
T ss_pred eeecCCCccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchhHHHHHHHhhcccC--CCCccc
Confidence 7654332 2334578999999999865 588999999999999999999999976532 233344444332 223335
Q ss_pred CCCHHHHHHHHHhcccCccccCCHHHHhc
Q 042823 251 SISSTAKDLVRRMLTKDPKRRITAAQVLE 279 (477)
Q Consensus 251 ~~~~~~~~li~~~l~~dp~~R~s~~~~l~ 279 (477)
.+++++.++|.+||..||.+|||+.++++
T Consensus 262 ~~~~~l~~li~~~l~~dp~~Rps~~~il~ 290 (310)
T 2wqm_A 262 HYSEELRQLVNMCINPDPEKRPDVTYVYD 290 (310)
T ss_dssp TSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred ccCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 68999999999999999999999999986
|
| >2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-45 Score=358.29 Aligned_cols=257 Identities=19% Similarity=0.288 Sum_probs=217.5
Q ss_pred cccccccccccccccccccCCeEEEEEEEc-------cCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeE
Q 042823 16 KAYEDVMLHYFFGRMLGRGQFGVSYLCTEN-------STNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVE 88 (477)
Q Consensus 16 ~~~~~~~~~Y~~~~~iG~G~~g~V~~~~~~-------~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~ 88 (477)
..++...++|++++.||+|+||.||+|.+. .++..||+|++.... .......+.+|+.++..+.+||||++
T Consensus 28 ~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~hp~iv~ 105 (334)
T 2pvf_A 28 PKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDA--TEKDLSDLVSEMEMMKMIGKHKNIIN 105 (334)
T ss_dssp TTTBCCGGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTC--CHHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred ccccCCHhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCC--cHHHHHHHHHHHHHHHHhhcCCCEee
Confidence 345566789999999999999999999975 467789999986543 33456678899999999978999999
Q ss_pred EEEEEEeCCeEEEEEeccCCCchHHHHHHcC----------------CCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCC
Q 042823 89 FKSTYEDETAVHVVMELCEGGDLFDRIIAKG----------------YNSERDAATVLRAIVNAVNVCHSMGVMHRDLKP 152 (477)
Q Consensus 89 ~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~----------------~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp 152 (477)
+++++...+.+|+||||++||+|.+++.... .+++..+..++.||+.||.|||++||+||||||
T Consensus 106 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp 185 (334)
T 2pvf_A 106 LLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAA 185 (334)
T ss_dssp EEEEECSSSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSG
T ss_pred EEEEEccCCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCcc
Confidence 9999999999999999999999999998654 389999999999999999999999999999999
Q ss_pred CceeeeecCCCCCEEEeecCCccccCCCcc---eecccccccccchhhhhh-hcCCccchHhHHHHHHHHhh-CCCCCCC
Q 042823 153 ENFSFISRDDNALLKVTDFGSALLFEEGQV---YRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLS-GVPPFWA 227 (477)
Q Consensus 153 ~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~t-g~~pf~~ 227 (477)
+||++ +.++.+||+|||++........ .....+|+.|+|||++.+ .++.++|||||||++|+|++ |..||.+
T Consensus 186 ~NIll---~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~ 262 (334)
T 2pvf_A 186 RNVLV---TENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPG 262 (334)
T ss_dssp GGEEE---CTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTT
T ss_pred ceEEE---cCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCc
Confidence 99999 7788999999999987654322 223457888999999864 58999999999999999999 9999998
Q ss_pred CChhhHHHHHHcCCccCCCCCCCCCCHHHHHHHHHhcccCccccCCHHHHhcC
Q 042823 228 ETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEH 280 (477)
Q Consensus 228 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h 280 (477)
.........+..+... .....+++.+.++|.+||+.||.+|||+.+++++
T Consensus 263 ~~~~~~~~~~~~~~~~---~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~ 312 (334)
T 2pvf_A 263 IPVEELFKLLKEGHRM---DKPANCTNELYMMMRDCWHAVPSQRPTFKQLVED 312 (334)
T ss_dssp CCHHHHHHHHHHTCCC---CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred CCHHHHHHHHhcCCCC---CCCccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 8877777766665422 1224689999999999999999999999999864
|
| >4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-46 Score=373.20 Aligned_cols=259 Identities=23% Similarity=0.392 Sum_probs=212.4
Q ss_pred cccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCC
Q 042823 18 YEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDET 97 (477)
Q Consensus 18 ~~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~ 97 (477)
...+.++|++.+.||+|+||.||+|.++.+++.||+|++..... ......+.+|+.++..+ +||||+++++++....
T Consensus 4 ~~~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~E~~~l~~l-~hpnIv~~~~~~~~~~ 80 (396)
T 4eut_A 4 QSTSNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISF--LRPVDVQMREFEVLKKL-NHKNIVKLFAIEEETT 80 (396)
T ss_dssp EECSSEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGG--GSCHHHHHHHHHHHHHC-CCTTBCCEEEEEECTT
T ss_pred CCCCCCceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccc--cchHHHHHHHHHHHHhc-CCCCCCeEEEeeccCC
Confidence 45667899999999999999999999999999999999865432 22356678999999999 6999999999998765
Q ss_pred --eEEEEEeccCCCchHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeee-cCCCCCEEEeec
Q 042823 98 --AVHVVMELCEGGDLFDRIIAKG---YNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFIS-RDDNALLKVTDF 171 (477)
Q Consensus 98 --~~~lv~e~~~gg~L~~~l~~~~---~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~-~~~~~~~kl~Df 171 (477)
..|+|||||+||+|.+++.... .+++..++.++.||+.||.|||++||+||||||+||++.. .+..+.+||+||
T Consensus 81 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL~DF 160 (396)
T 4eut_A 81 TRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDF 160 (396)
T ss_dssp TCCEEEEECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEECTTSCEEEEECCG
T ss_pred CCeeEEEEecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHCCEEECCcCHHHEEEeecCCCceeEEEecC
Confidence 7899999999999999997643 3899999999999999999999999999999999998743 345567999999
Q ss_pred CCccccCCCcceecccccccccchhhhh---------hhcCCccchHhHHHHHHHHhhCCCCCCCC----ChhhHHHHHH
Q 042823 172 GSALLFEEGQVYRDIVGSGFYIAPEVLR---------RRYGKEIDIWSAGVILYILLSGVPPFWAE----TKKGTYDAIL 238 (477)
Q Consensus 172 g~a~~~~~~~~~~~~~gt~~y~aPE~~~---------~~~~~~~DiwslG~il~~l~tg~~pf~~~----~~~~~~~~i~ 238 (477)
|++.............||+.|+|||++. ..++.++|||||||++|+|++|..||... ........+.
T Consensus 161 G~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~ 240 (396)
T 4eut_A 161 GAARELEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKII 240 (396)
T ss_dssp GGCEECCCGGGSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHH
T ss_pred CCceEccCCCccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHh
Confidence 9998876655556678999999999985 45788999999999999999999999643 2334455555
Q ss_pred cCCccCC---------------------CCCCCCCCHHHHHHHHHhcccCccccCCHHHHhc
Q 042823 239 QGEIDFD---------------------TDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLE 279 (477)
Q Consensus 239 ~~~~~~~---------------------~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~ 279 (477)
.+..... ......+++.+.++|.+||+.||++|||+.++++
T Consensus 241 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~ 302 (396)
T 4eut_A 241 TGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFA 302 (396)
T ss_dssp HSCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHH
T ss_pred cCCCcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHH
Confidence 4432100 0001124567889999999999999999999854
|
| >2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.4e-46 Score=359.10 Aligned_cols=262 Identities=20% Similarity=0.216 Sum_probs=216.6
Q ss_pred ccccccccccccccccccCCeEEEEEE-----EccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEE
Q 042823 17 AYEDVMLHYFFGRMLGRGQFGVSYLCT-----ENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKS 91 (477)
Q Consensus 17 ~~~~~~~~Y~~~~~iG~G~~g~V~~~~-----~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~ 91 (477)
-.+...++|++++.||+|+||.||+|. +..++..||+|++.... .......+.+|+.++..+ +||||+++++
T Consensus 24 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l-~h~~iv~~~~ 100 (327)
T 2yfx_A 24 LKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVC--SEQDELDFLMEALIISKF-NHQNIVRCIG 100 (327)
T ss_dssp SCBCCGGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSC--CHHHHHHHHHHHHHHHHC-CCTTBCCEEE
T ss_pred cccCChhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEecccc--chhhHHHHHHHHHHHhhC-CCCCCCeEEE
Confidence 345667899999999999999999998 55678899999986432 234456788999999999 7999999999
Q ss_pred EEEeCCeEEEEEeccCCCchHHHHHHcC-------CCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCC
Q 042823 92 TYEDETAVHVVMELCEGGDLFDRIIAKG-------YNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNA 164 (477)
Q Consensus 92 ~~~~~~~~~lv~e~~~gg~L~~~l~~~~-------~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~ 164 (477)
++......|+|||||+||+|.+++.... .+++..+..++.||+.||.|||++||+||||||+||++...+...
T Consensus 101 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~i~H~dlkp~NIli~~~~~~~ 180 (327)
T 2yfx_A 101 VSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGR 180 (327)
T ss_dssp EECSSSSCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTC
T ss_pred EEcCCCCcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeecCcCCHhHEEEecCCCcc
Confidence 9999999999999999999999998753 488999999999999999999999999999999999995444567
Q ss_pred CEEEeecCCccccCCCc---ceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhh-CCCCCCCCChhhHHHHHHc
Q 042823 165 LLKVTDFGSALLFEEGQ---VYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQ 239 (477)
Q Consensus 165 ~~kl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~t-g~~pf~~~~~~~~~~~i~~ 239 (477)
.+||+|||++....... ......||+.|+|||++.+ .++.++|||||||++|+|+| |..||...........+..
T Consensus 181 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~ 260 (327)
T 2yfx_A 181 VAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTS 260 (327)
T ss_dssp CEEECCCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHT
T ss_pred eEEECccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHHHHHHHHhc
Confidence 79999999987543222 1234567899999999864 68999999999999999998 9999988887777777766
Q ss_pred CCccCCCCCCCCCCHHHHHHHHHhcccCccccCCHHHHhcCcccC
Q 042823 240 GEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLR 284 (477)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~ 284 (477)
+.... ..+.+++.+.++|.+||+.||.+|||+.++++|.|..
T Consensus 261 ~~~~~---~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~ 302 (327)
T 2yfx_A 261 GGRMD---PPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYC 302 (327)
T ss_dssp TCCCC---CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred CCCCC---CCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHH
Confidence 54322 2356899999999999999999999999999988753
|
| >4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-46 Score=354.05 Aligned_cols=250 Identities=14% Similarity=0.154 Sum_probs=205.0
Q ss_pred cccccccccccccccCCeEEEEEEEccCC-------ceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEE
Q 042823 20 DVMLHYFFGRMLGRGQFGVSYLCTENSTN-------RPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKST 92 (477)
Q Consensus 20 ~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~-------~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~ 92 (477)
...++|.+.+.||+|+||.||+|.++.++ ..||+|++.... ......+.+|+.++..+ +||||++++++
T Consensus 5 i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~---~~~~~~~~~E~~~l~~l-~h~~iv~~~~~ 80 (289)
T 4fvq_A 5 IRNEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAH---RNYSESFFEAASMMSKL-SHKHLVLNYGV 80 (289)
T ss_dssp CCGGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGG---GGGHHHHHHHHHHHHTS-CCTTBCCEEEE
T ss_pred echhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhccccc---HHHHHHHHHHHHHHHhC-CCCCEeEEEEE
Confidence 34678999999999999999999998877 469999986432 23456788999999999 69999999999
Q ss_pred EEeCCeEEEEEeccCCCchHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCC-----CCCE
Q 042823 93 YEDETAVHVVMELCEGGDLFDRIIAKGY-NSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDD-----NALL 166 (477)
Q Consensus 93 ~~~~~~~~lv~e~~~gg~L~~~l~~~~~-~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~-----~~~~ 166 (477)
+.+.+..|+|||||+||+|.+++...+. +++..+..++.||+.||.|||++||+||||||+||++..... .+.+
T Consensus 81 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~ 160 (289)
T 4fvq_A 81 CVCGDENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFI 160 (289)
T ss_dssp ECCTTCCEEEEECCTTCBHHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEEECCBGGGTBCCEE
T ss_pred EEeCCCCEEEEECCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHhhCCeECCCcCcceEEEecCCccccccccee
Confidence 9999999999999999999999987654 899999999999999999999999999999999999943321 1229
Q ss_pred EEeecCCccccCCCcceecccccccccchhhhhh--hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccC
Q 042823 167 KVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDF 244 (477)
Q Consensus 167 kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~ 244 (477)
||+|||++...... ....||+.|+|||++.+ .++.++|||||||++|+|++|..|+...................
T Consensus 161 kl~Dfg~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~ 237 (289)
T 4fvq_A 161 KLSDPGISITVLPK---DILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQFYEDRHQL 237 (289)
T ss_dssp EECCCCSCTTTSCH---HHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCCC
T ss_pred eeccCcccccccCc---cccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchHHHHHHhhccCCC
Confidence 99999998765432 23468899999999874 58999999999999999999554444443333333333333322
Q ss_pred CCCCCCCCCHHHHHHHHHhcccCccccCCHHHHhcC
Q 042823 245 DTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEH 280 (477)
Q Consensus 245 ~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h 280 (477)
+ +..++++.++|.+||+.||.+|||+.++++|
T Consensus 238 ~----~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~ 269 (289)
T 4fvq_A 238 P----APKAAELANLINNCMDYEPDHRPSFRAIIRD 269 (289)
T ss_dssp C----CCSSCTTHHHHHHHSCSSGGGSCCHHHHHHH
T ss_pred C----CCCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence 2 3457889999999999999999999999975
|
| >3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=8.9e-46 Score=353.20 Aligned_cols=252 Identities=19% Similarity=0.259 Sum_probs=202.6
Q ss_pred cccccccccccccccccCCeEEEEEE----EccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEE
Q 042823 18 YEDVMLHYFFGRMLGRGQFGVSYLCT----ENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTY 93 (477)
Q Consensus 18 ~~~~~~~Y~~~~~iG~G~~g~V~~~~----~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~ 93 (477)
.+...++|++++.||+|+||+||+|. +..+++.||+|++... .......+.+|+.++..+ +||||+++++++
T Consensus 5 ~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~ 80 (295)
T 3ugc_A 5 TQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS---TEEHLRDFEREIEILKSL-QHDNIVKYKGVC 80 (295)
T ss_dssp -CCCGGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCC---CHHHHHHHHHHHHHHHTC-CCTTBCCEEEEE
T ss_pred CcCCHHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccC---CHHHHHHHHHHHHHHHhC-CCCCEeeEEEEE
Confidence 44566799999999999999999998 5678999999998643 234456788999999999 699999999998
Q ss_pred Ee--CCeEEEEEeccCCCchHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEee
Q 042823 94 ED--ETAVHVVMELCEGGDLFDRIIAKG-YNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTD 170 (477)
Q Consensus 94 ~~--~~~~~lv~e~~~gg~L~~~l~~~~-~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~D 170 (477)
.. ...+|+|||||+||+|.+++.... .+++..+..++.|++.||.|||++||+||||||+||++ +.++.+||+|
T Consensus 81 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~---~~~~~~kl~D 157 (295)
T 3ugc_A 81 YSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILV---ENENRVKIGD 157 (295)
T ss_dssp CHHHHTSCEEEEECCTTCBHHHHHHHCGGGCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE---EETTEEEECC
T ss_pred ecCCCCceEEEEEeCCCCCHHHHHHhcccccCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHhhEEE---cCCCeEEEcc
Confidence 54 456899999999999999998754 58999999999999999999999999999999999999 5667899999
Q ss_pred cCCccccCCCcc----eecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChh--------------
Q 042823 171 FGSALLFEEGQV----YRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKK-------------- 231 (477)
Q Consensus 171 fg~a~~~~~~~~----~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~-------------- 231 (477)
||++........ .....+|+.|+|||++.+ .++.++|||||||++|+|+||..||......
T Consensus 158 fg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~ 237 (295)
T 3ugc_A 158 FGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMI 237 (295)
T ss_dssp CCSCC-------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHH
T ss_pred CcccccccCCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchh
Confidence 999987644321 223457788999999874 6899999999999999999999998543211
Q ss_pred --hHHHHHHcCCccCCCCCCCCCCHHHHHHHHHhcccCccccCCHHHHhc
Q 042823 232 --GTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLE 279 (477)
Q Consensus 232 --~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~ 279 (477)
.....+..+ .. .+..+.+|+++.++|.+||+.||++|||+.++++
T Consensus 238 ~~~~~~~~~~~-~~--~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~ 284 (295)
T 3ugc_A 238 VFHLIELLKNN-GR--LPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLAL 284 (295)
T ss_dssp HHHHHHHHHTT-CC--CCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred HHHHHHHHhcc-Cc--CCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 111122222 11 1223468999999999999999999999999975
|
| >1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-46 Score=367.95 Aligned_cols=259 Identities=23% Similarity=0.393 Sum_probs=206.2
Q ss_pred cccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhcc----------CCCCeeEEEE
Q 042823 22 MLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLS----------GQPNVVEFKS 91 (477)
Q Consensus 22 ~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~----------~hpniv~~~~ 91 (477)
.++|++.+.||+|+||+||+|.+..+++.||+|++... ......+.+|+.++..+. .||||+++++
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~ 93 (373)
T 1q8y_A 18 DARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGD----KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLD 93 (373)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC----HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCE
T ss_pred CCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCC----ccchhhhhHHHHHHHHhhcccccchhccccchHHHHHH
Confidence 46899999999999999999999999999999998643 234456788888888774 2899999999
Q ss_pred EEEeCC----eEEEEEeccCCCchHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHc-CCeeccCCCCceeeeecC---
Q 042823 92 TYEDET----AVHVVMELCEGGDLFDRIIAK--GYNSERDAATVLRAIVNAVNVCHSM-GVMHRDLKPENFSFISRD--- 161 (477)
Q Consensus 92 ~~~~~~----~~~lv~e~~~gg~L~~~l~~~--~~~~~~~~~~i~~qil~~L~~lH~~-~ivH~dlkp~Nil~~~~~--- 161 (477)
++...+ .+++||||+ |++|.+++... ..+++..+..++.||+.||.|||++ ||+||||||+||++...+
T Consensus 94 ~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~~ivH~Dikp~NIll~~~~~~~ 172 (373)
T 1q8y_A 94 HFNHKGPNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPE 172 (373)
T ss_dssp EEEEEETTEEEEEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGEEEEEEETTT
T ss_pred HhhccCCCCceEEEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHhcCCEEecCCChHHeEEeccCCCc
Confidence 998654 799999999 88999999873 4589999999999999999999998 999999999999995432
Q ss_pred CCCCEEEeecCCccccCCCcceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCCh------hhHH
Q 042823 162 DNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETK------KGTY 234 (477)
Q Consensus 162 ~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~------~~~~ 234 (477)
..+.+||+|||++...... .....||+.|+|||++.+ .++.++|||||||++|+|++|..||.+... ....
T Consensus 173 ~~~~~kl~Dfg~a~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~ 250 (373)
T 1q8y_A 173 NLIQIKIADLGNACWYDEH--YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHI 250 (373)
T ss_dssp TEEEEEECCCTTCEETTBC--CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHH
T ss_pred CcceEEEcccccccccCCC--CCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChHHHH
Confidence 3347999999999876543 244579999999999875 589999999999999999999999976542 1222
Q ss_pred HHHHcCCccCC--------------------------------------CCCCCCCCHHHHHHHHHhcccCccccCCHHH
Q 042823 235 DAILQGEIDFD--------------------------------------TDPWPSISSTAKDLVRRMLTKDPKRRITAAQ 276 (477)
Q Consensus 235 ~~i~~~~~~~~--------------------------------------~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~ 276 (477)
..+.......+ ....+.+++++.+||.+||+.||++|||+.+
T Consensus 251 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e 330 (373)
T 1q8y_A 251 AQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGG 330 (373)
T ss_dssp HHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHH
T ss_pred HHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCCHHH
Confidence 22221000000 0001134578899999999999999999999
Q ss_pred HhcCcccCcCC
Q 042823 277 VLEHPWLRESG 287 (477)
Q Consensus 277 ~l~h~~~~~~~ 287 (477)
+|+||||+...
T Consensus 331 ll~hp~f~~~~ 341 (373)
T 1q8y_A 331 LVNHPWLKDTL 341 (373)
T ss_dssp HHTCGGGTTCT
T ss_pred HhhChhhhccc
Confidence 99999998754
|
| >2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=7.6e-46 Score=357.09 Aligned_cols=259 Identities=21% Similarity=0.305 Sum_probs=214.4
Q ss_pred cccccccccccccccccccccCCeEEEEEEE-----ccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeE
Q 042823 14 LGKAYEDVMLHYFFGRMLGRGQFGVSYLCTE-----NSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVE 88 (477)
Q Consensus 14 ~~~~~~~~~~~Y~~~~~iG~G~~g~V~~~~~-----~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~ 88 (477)
....+....++|++++.||+|+||.||+|.+ ..+++.||+|++.... .......+.+|+.++..+.+||||++
T Consensus 18 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~hp~iv~ 95 (316)
T 2xir_A 18 DASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA--THSEHRALMSELKILIHIGHHLNVVN 95 (316)
T ss_dssp CHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC--CHHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred cccceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCC--CcHHHHHHHHHHHHHHhcccCCCeee
Confidence 3345566778999999999999999999985 4567899999986543 23345678899999999978999999
Q ss_pred EEEEEEeCC-eEEEEEeccCCCchHHHHHHcCC----------------CCHHHHHHHHHHHHHHHHHHHHcCCeeccCC
Q 042823 89 FKSTYEDET-AVHVVMELCEGGDLFDRIIAKGY----------------NSERDAATVLRAIVNAVNVCHSMGVMHRDLK 151 (477)
Q Consensus 89 ~~~~~~~~~-~~~lv~e~~~gg~L~~~l~~~~~----------------~~~~~~~~i~~qil~~L~~lH~~~ivH~dlk 151 (477)
+++++...+ .+|+|||||+||+|.+++..... +++..+..++.||+.||.|||++||+|||||
T Consensus 96 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dik 175 (316)
T 2xir_A 96 LLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLA 175 (316)
T ss_dssp EEEEECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHTTCCCSCCS
T ss_pred EEEEEecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhCCcccccCc
Confidence 999987654 59999999999999999987654 7899999999999999999999999999999
Q ss_pred CCceeeeecCCCCCEEEeecCCccccCCCcc---eecccccccccchhhhhh-hcCCccchHhHHHHHHHHhh-CCCCCC
Q 042823 152 PENFSFISRDDNALLKVTDFGSALLFEEGQV---YRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLS-GVPPFW 226 (477)
Q Consensus 152 p~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~t-g~~pf~ 226 (477)
|+||++ +..+.+||+|||++........ .....||+.|+|||++.+ .++.++|||||||++|+|+| |..||.
T Consensus 176 p~Nil~---~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~ 252 (316)
T 2xir_A 176 ARNILL---SEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYP 252 (316)
T ss_dssp GGGEEE---CGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSST
T ss_pred cceEEE---CCCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCc
Confidence 999999 6778899999999976543322 234567889999999865 58999999999999999998 999998
Q ss_pred CCChhhHH-HHHHcCCccCCCCCCCCCCHHHHHHHHHhcccCccccCCHHHHhcC
Q 042823 227 AETKKGTY-DAILQGEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEH 280 (477)
Q Consensus 227 ~~~~~~~~-~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h 280 (477)
+....... ..+..+.. .. ....+++.+.++|.+||+.||.+|||+.++++|
T Consensus 253 ~~~~~~~~~~~~~~~~~-~~--~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~ 304 (316)
T 2xir_A 253 GVKIDEEFCRRLKEGTR-MR--APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 304 (316)
T ss_dssp TCCCSHHHHHHHHHTCC-CC--CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred ccchhHHHHHHhccCcc-CC--CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 76644433 33333322 11 124579999999999999999999999999976
|
| >3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=9.7e-46 Score=358.17 Aligned_cols=249 Identities=20% Similarity=0.222 Sum_probs=203.2
Q ss_pred cccccccccccccCCeEEEEEEEccCCceE----EEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCC
Q 042823 22 MLHYFFGRMLGRGQFGVSYLCTENSTNRPY----ACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDET 97 (477)
Q Consensus 22 ~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~----aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~ 97 (477)
.++|++.+.||+|+||+||+|.+..+++.+ |+|.+.... .......+.+|+.++.++ +||||+++++++....
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~ 90 (327)
T 3poz_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT--SPKANKEILDEAYVMASV-DNPHVCRLLGICLTST 90 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC---------CHHHHHHHHHHHHHC-CBTTBCCEEEEEESSS
T ss_pred HHHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeeccccc--CHHHHHHHHHHHHHHHhC-CCCCEeEEEEEEecCC
Confidence 467999999999999999999998887765 666654322 223456788999999999 7999999999998765
Q ss_pred eEEEEEeccCCCchHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccc
Q 042823 98 AVHVVMELCEGGDLFDRIIA-KGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALL 176 (477)
Q Consensus 98 ~~~lv~e~~~gg~L~~~l~~-~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~ 176 (477)
.++|+||+.+|+|.+++.. .+.+++..+..++.||+.||.|||++||+||||||+||++ +.++.+||+|||++..
T Consensus 91 -~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIll---~~~~~~kl~Dfg~a~~ 166 (327)
T 3poz_A 91 -VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLV---KTPQHVKITDFGLAKL 166 (327)
T ss_dssp -EEEEEECCTTCBHHHHHHHSTTSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE---EETTEEEECCTTHHHH
T ss_pred -eEEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCChheEEE---CCCCCEEEccCcceeE
Confidence 7899999999999999987 4578999999999999999999999999999999999999 5677899999999986
Q ss_pred cCCCcc---eecccccccccchhhhhh-hcCCccchHhHHHHHHHHhh-CCCCCCCCChhhHHHHHHcCCccCCCCCCCC
Q 042823 177 FEEGQV---YRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQGEIDFDTDPWPS 251 (477)
Q Consensus 177 ~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~t-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 251 (477)
...... .....||+.|+|||++.+ .++.++|||||||++|+|+| |..||.+.........+..+.... ..+.
T Consensus 167 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~---~~~~ 243 (327)
T 3poz_A 167 LGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLP---QPPI 243 (327)
T ss_dssp HTTTCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCCC---CCTT
T ss_pred ccCCcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHHHHHHHHcCCCCC---CCcc
Confidence 643322 223456889999999875 58999999999999999999 999999888777776666554221 2246
Q ss_pred CCHHHHHHHHHhcccCccccCCHHHHhcC
Q 042823 252 ISSTAKDLVRRMLTKDPKRRITAAQVLEH 280 (477)
Q Consensus 252 ~~~~~~~li~~~l~~dp~~R~s~~~~l~h 280 (477)
++..+.+++.+||+.||.+|||+.+++++
T Consensus 244 ~~~~~~~li~~~l~~~p~~Rps~~ell~~ 272 (327)
T 3poz_A 244 CTIDVYMIMVKCWMIDADSRPKFRELIIE 272 (327)
T ss_dssp BCHHHHHHHHHHTCSCGGGSCCHHHHHHH
T ss_pred CCHHHHHHHHHHcCCChhhCCCHHHHHHH
Confidence 88999999999999999999999999864
|
| >1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-45 Score=349.01 Aligned_cols=261 Identities=21% Similarity=0.284 Sum_probs=202.9
Q ss_pred CCCCCCcCCCCCccccccccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhc
Q 042823 1 MGCSVSKNQRDPILGKAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYL 80 (477)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l 80 (477)
||.+.+.+.. +....+....++|++.+.||+|+||.||+|.+ +++.||+|++.... ....+.+|+.++..+
T Consensus 1 mg~s~~~~~~--~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~-----~~~~~~~E~~~l~~l 71 (278)
T 1byg_A 1 MGGSVAAQDE--FYRSGWALNMKELKLLQTIGKGEFGDVMLGDY--RGNKVAVKCIKNDA-----TAQAFLAEASVMTQL 71 (278)
T ss_dssp ----------------CCBCCGGGEEEEEEEEECSSCEEEEEEE--TTEEEEEEECCCCC-------HHHHHTHHHHTTC
T ss_pred CCCCccchhh--hhhccccCChhhceEEeEEecCCCceEEEEEE--cCCEEEEEEecchh-----HHHHHHHHHHHHHhC
Confidence 8887775542 22333445568999999999999999999987 48899999986432 345688999999999
Q ss_pred cCCCCeeEEEEEEEe-CCeEEEEEeccCCCchHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceee
Q 042823 81 SGQPNVVEFKSTYED-ETAVHVVMELCEGGDLFDRIIAKGY--NSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSF 157 (477)
Q Consensus 81 ~~hpniv~~~~~~~~-~~~~~lv~e~~~gg~L~~~l~~~~~--~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~ 157 (477)
+||||+++++++.. .+.+|+||||++||+|.+++...+. +++..+..++.|++.||.|||++|++||||||+||++
T Consensus 72 -~h~~iv~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~ 150 (278)
T 1byg_A 72 -RHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLV 150 (278)
T ss_dssp -CCTTBCCEEEEECCC--CCEEEECCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE
T ss_pred -CCCCEeeEEEEEEcCCCceEEEEecCCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhCCccccCCCcceEEE
Confidence 79999999999754 4578999999999999999987543 8999999999999999999999999999999999999
Q ss_pred eecCCCCCEEEeecCCccccCCCcceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhh-CCCCCCCCChhhHHH
Q 042823 158 ISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYD 235 (477)
Q Consensus 158 ~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~t-g~~pf~~~~~~~~~~ 235 (477)
+.++.+||+|||++....... ....+++.|+|||++.+ .++.++||||||+++|+|+| |.+||..........
T Consensus 151 ---~~~~~~~l~Dfg~~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~ 225 (278)
T 1byg_A 151 ---SEDNVAKVSDFGLTKEASSTQ--DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVP 225 (278)
T ss_dssp ---CTTSCEEECCCCC--------------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHHH
T ss_pred ---eCCCcEEEeeccccccccccc--cCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHH
Confidence 778899999999987654332 23467889999999864 58899999999999999998 999998888777777
Q ss_pred HHHcCCccCCCCCCCCCCHHHHHHHHHhcccCccccCCHHHHhc
Q 042823 236 AILQGEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLE 279 (477)
Q Consensus 236 ~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~ 279 (477)
.+..+.. ....+.+++.+.++|.+||+.||.+|||+.++++
T Consensus 226 ~~~~~~~---~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~ 266 (278)
T 1byg_A 226 RVEKGYK---MDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLRE 266 (278)
T ss_dssp HHTTTCC---CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHhcCCC---CCCcccCCHHHHHHHHHHhcCChhhCCCHHHHHH
Confidence 6665432 2223568999999999999999999999999875
|
| >3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-45 Score=351.64 Aligned_cols=243 Identities=33% Similarity=0.631 Sum_probs=197.2
Q ss_pred cccccccccc-ccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEe--
Q 042823 19 EDVMLHYFFG-RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYED-- 95 (477)
Q Consensus 19 ~~~~~~Y~~~-~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~-- 95 (477)
..+.++|.+. +.||+|+||.||+|.++.+++.||+|++... ....+|+.++.++.+||||+++++++..
T Consensus 13 ~~~~~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--------~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~ 84 (299)
T 3m2w_A 13 NAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC--------PKARREVELHWRASQCPHIVRIVDVYENLY 84 (299)
T ss_dssp SCGGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS--------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEE
T ss_pred cccccchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEeccc--------HHHHHHHHHHHHhccCCCchhHHhhhhhhc
Confidence 4566777776 8899999999999999999999999998532 3456788888677689999999999987
Q ss_pred --CCeEEEEEeccCCCchHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeec
Q 042823 96 --ETAVHVVMELCEGGDLFDRIIAKG--YNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDF 171 (477)
Q Consensus 96 --~~~~~lv~e~~~gg~L~~~l~~~~--~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Df 171 (477)
...+|+|||||+||+|.+++.... .+++..++.++.|++.||.|||++||+||||||+||++......+.+||+||
T Consensus 85 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~~~kl~Df 164 (299)
T 3m2w_A 85 AGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDF 164 (299)
T ss_dssp TTEEEEEEEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSTTCCEEECCC
T ss_pred CCCceEEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEecCCCCCcEEEecc
Confidence 778999999999999999998864 6899999999999999999999999999999999999954334788999999
Q ss_pred CCccccCCCcceecccccccccchhhhhhhcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHH----cCCccCCCC
Q 042823 172 GSALLFEEGQVYRDIVGSGFYIAPEVLRRRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAIL----QGEIDFDTD 247 (477)
Q Consensus 172 g~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~----~~~~~~~~~ 247 (477)
|++..... ..++.++|||||||++|+|++|.+||............. .+...++..
T Consensus 165 g~a~~~~~--------------------~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (299)
T 3m2w_A 165 GFAKETTG--------------------EKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNP 224 (299)
T ss_dssp TTCEECTT--------------------CGGGGHHHHHHHHHHHHHHHHSSCSCCC-------CCSCCSSCTTCCSSCHH
T ss_pred cccccccc--------------------ccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhhHHHHHHHhhccccCCch
Confidence 98865432 346779999999999999999999997655433221111 111222222
Q ss_pred CCCCCCHHHHHHHHHhcccCccccCCHHHHhcCcccCcCCCC
Q 042823 248 PWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEA 289 (477)
Q Consensus 248 ~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~~~~ 289 (477)
.++.+|+++.+||.+||+.||.+|||+.++++||||+.....
T Consensus 225 ~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~hp~~~~~~~~ 266 (299)
T 3m2w_A 225 EWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKV 266 (299)
T ss_dssp HHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHTGGGS
T ss_pred hcccCCHHHHHHHHHHcccChhhCCCHHHHhcChhhcccccC
Confidence 234689999999999999999999999999999999876543
|
| >2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-45 Score=371.01 Aligned_cols=257 Identities=29% Similarity=0.467 Sum_probs=200.5
Q ss_pred ccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCe
Q 042823 19 EDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETA 98 (477)
Q Consensus 19 ~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~ 98 (477)
..+.+.|.+.+.||+|+||+||.+ ...+|+.||||++... ..+...+|+.++..+.+||||+++++++.+...
T Consensus 11 ~~l~~~~~~~~~LG~G~~g~V~~~-~~~~g~~vAvK~~~~~------~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~ 83 (434)
T 2rio_A 11 QSLKNLVVSEKILGYGSSGTVVFQ-GSFQGRPVAVKRMLID------FCDIALMEIKLLTESDDHPNVIRYYCSETTDRF 83 (434)
T ss_dssp CSCSSCEEEEEEEEECSTTCEEEE-EESSSSEEEEEEEEGG------GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSE
T ss_pred hhhhheeeccCeEeeCCCeEEEEE-EEECCeEEEEEEEcHH------HHHHHHHHHHHHHhccCCCCcCeEEEEEecCCe
Confidence 456667888899999999999875 4467999999998643 234567899999887689999999999999999
Q ss_pred EEEEEeccCCCchHHHHHHcCCCC-------HHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeec----------C
Q 042823 99 VHVVMELCEGGDLFDRIIAKGYNS-------ERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISR----------D 161 (477)
Q Consensus 99 ~~lv~e~~~gg~L~~~l~~~~~~~-------~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~----------~ 161 (477)
+|+|||||+ |+|.+++....... +..+..++.||+.||.|||++||+||||||+||++... +
T Consensus 84 ~~lv~E~~~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~~~~~~~~~~ 162 (434)
T 2rio_A 84 LYIALELCN-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGA 162 (434)
T ss_dssp EEEEECCCS-EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEECCHHHHSCCTTCC
T ss_pred EEEEEecCC-CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHCCccccCCChHhEEEecCcccccccccCC
Confidence 999999996 59999998765332 23456799999999999999999999999999999543 2
Q ss_pred CCCCEEEeecCCccccCCCcc-----eecccccccccchhhhhh--------hcCCccchHhHHHHHHHHhh-CCCCCCC
Q 042823 162 DNALLKVTDFGSALLFEEGQV-----YRDIVGSGFYIAPEVLRR--------RYGKEIDIWSAGVILYILLS-GVPPFWA 227 (477)
Q Consensus 162 ~~~~~kl~Dfg~a~~~~~~~~-----~~~~~gt~~y~aPE~~~~--------~~~~~~DiwslG~il~~l~t-g~~pf~~ 227 (477)
....+||+|||++........ .....||+.|+|||++.+ .++.++|||||||++|+|+| |.+||..
T Consensus 163 ~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~ 242 (434)
T 2rio_A 163 ENLRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGD 242 (434)
T ss_dssp CSCEEEECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCS
T ss_pred CceEEEEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCC
Confidence 456899999999987654321 234579999999999853 57899999999999999999 9999976
Q ss_pred CChhhHHHHHHcCCccCCCCC---CCCCCHHHHHHHHHhcccCccccCCHHHHhcCcccCc
Q 042823 228 ETKKGTYDAILQGEIDFDTDP---WPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRE 285 (477)
Q Consensus 228 ~~~~~~~~~i~~~~~~~~~~~---~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~ 285 (477)
..... ..+..+....+... .+.+++++.+||.+||+.||.+|||+.++++||||..
T Consensus 243 ~~~~~--~~i~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~hp~f~~ 301 (434)
T 2rio_A 243 KYSRE--SNIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPLFWP 301 (434)
T ss_dssp TTTHH--HHHHHTCCCCCCCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSC
T ss_pred chhhH--HHHhcCCCCcccccccccccchHHHHHHHHHHhhCChhhCCCHHHHHhCCccCC
Confidence 54433 34445444333221 1234688999999999999999999999999999964
|
| >2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-45 Score=358.01 Aligned_cols=257 Identities=21% Similarity=0.312 Sum_probs=215.5
Q ss_pred cccccccccccccccccccCCeEEEEEEEccCCc-----eEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEE
Q 042823 16 KAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNR-----PYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFK 90 (477)
Q Consensus 16 ~~~~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~-----~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~ 90 (477)
..++...++|.+.+.||+|+||.||+|.+..+++ .||+|++.... .......+.+|+.++..+.+||||++++
T Consensus 39 ~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~iv~~~ 116 (333)
T 2i1m_A 39 EKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTA--HADEKEALMSELKIMSHLGQHENIVNLL 116 (333)
T ss_dssp GGGBCCTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTC--CHHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred ccccCCHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhccccc--ChHHHHHHHHHHHHHHhhcCCCCeeeEE
Confidence 3566677889999999999999999999977664 79999986543 2345567889999999997799999999
Q ss_pred EEEEeCCeEEEEEeccCCCchHHHHHHc--------------CCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcee
Q 042823 91 STYEDETAVHVVMELCEGGDLFDRIIAK--------------GYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFS 156 (477)
Q Consensus 91 ~~~~~~~~~~lv~e~~~gg~L~~~l~~~--------------~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil 156 (477)
+++...+.+|+|||||++|+|.+++... ..+++..+..++.||+.||.|||++||+||||||+||+
T Consensus 117 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl 196 (333)
T 2i1m_A 117 GACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVL 196 (333)
T ss_dssp EEECSSSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGCE
T ss_pred EEEecCCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCcccCCcccceEE
Confidence 9999999999999999999999999753 35799999999999999999999999999999999999
Q ss_pred eeecCCCCCEEEeecCCccccCCCcc---eecccccccccchhhhhh-hcCCccchHhHHHHHHHHhh-CCCCCCCCChh
Q 042823 157 FISRDDNALLKVTDFGSALLFEEGQV---YRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLS-GVPPFWAETKK 231 (477)
Q Consensus 157 ~~~~~~~~~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~t-g~~pf~~~~~~ 231 (477)
+ +.++.+||+|||++........ .....||+.|+|||++.+ .++.++|||||||++|+|+| |.+||.+....
T Consensus 197 ~---~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~ 273 (333)
T 2i1m_A 197 L---TNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVN 273 (333)
T ss_dssp E---EGGGEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSS
T ss_pred E---CCCCeEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchh
Confidence 9 5677899999999976543221 223457889999999864 68999999999999999998 99999887665
Q ss_pred hHHHHHHcCCccCCCCCCCCCCHHHHHHHHHhcccCccccCCHHHHhc
Q 042823 232 GTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLE 279 (477)
Q Consensus 232 ~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~ 279 (477)
.....+........ ..+.+++.+.++|.+||+.||.+|||+.++++
T Consensus 274 ~~~~~~~~~~~~~~--~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~ 319 (333)
T 2i1m_A 274 SKFYKLVKDGYQMA--QPAFAPKNIYSIMQACWALEPTHRPTFQQICS 319 (333)
T ss_dssp HHHHHHHHHTCCCC--CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHHHHhcCCCCC--CCCCCCHHHHHHHHHHhccChhhCcCHHHHHH
Confidence 55555544333222 22457899999999999999999999999986
|
| >2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-45 Score=362.49 Aligned_cols=251 Identities=21% Similarity=0.309 Sum_probs=203.4
Q ss_pred cccccccccccccccCCeEEEEEEEc---cCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeC
Q 042823 20 DVMLHYFFGRMLGRGQFGVSYLCTEN---STNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDE 96 (477)
Q Consensus 20 ~~~~~Y~~~~~iG~G~~g~V~~~~~~---~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~ 96 (477)
....+|.+.+.||+|+||.||+|+++ .++..||+|++.... .......+.+|+.++.++ +||||+++++++...
T Consensus 42 ~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~ 118 (373)
T 2qol_A 42 LDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGY--TEKQRRDFLGEASIMGQF-DHPNIIRLEGVVTKS 118 (373)
T ss_dssp CCGGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTC--CHHHHHHHHHHHHHHTTC-CCTTBCCEEEEECSS
T ss_pred cCHhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCcc--CHHHHHHHHHHHHHHHhC-CCCCCCeEEEEEeeC
Confidence 34568999999999999999999886 467789999986532 334566789999999999 799999999999999
Q ss_pred CeEEEEEeccCCCchHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCcc
Q 042823 97 TAVHVVMELCEGGDLFDRIIAKG-YNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSAL 175 (477)
Q Consensus 97 ~~~~lv~e~~~gg~L~~~l~~~~-~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~ 175 (477)
..+|+|||||+||+|.+++...+ .+++.++..++.||+.||.|||++||+||||||+||++ +.++.+||+|||++.
T Consensus 119 ~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll---~~~~~~kl~Dfg~a~ 195 (373)
T 2qol_A 119 KPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILI---NSNLVCKVSDFGLGR 195 (373)
T ss_dssp SSCEEEEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE---CTTCCEEECCC----
T ss_pred CceEEEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEE---cCCCCEEECcCcccc
Confidence 99999999999999999998754 68999999999999999999999999999999999999 778899999999998
Q ss_pred ccCCCcc----eecccccccccchhhhhh-hcCCccchHhHHHHHHHHhh-CCCCCCCCChhhHHHHHHcCCccCCCCCC
Q 042823 176 LFEEGQV----YRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQGEIDFDTDPW 249 (477)
Q Consensus 176 ~~~~~~~----~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~t-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~ 249 (477)
....... .....+|+.|+|||++.+ .++.++|||||||++|+|++ |..||...........+..+... +..
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~~~~~~i~~~~~~---~~~ 272 (373)
T 2qol_A 196 VLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRL---PPP 272 (373)
T ss_dssp ------------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHHHHHHHHHTTEEC---CCC
T ss_pred ccccCCccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCC---CCC
Confidence 7643321 122345778999999874 68999999999999999998 99999988887777777655321 122
Q ss_pred CCCCHHHHHHHHHhcccCccccCCHHHHhc
Q 042823 250 PSISSTAKDLVRRMLTKDPKRRITAAQVLE 279 (477)
Q Consensus 250 ~~~~~~~~~li~~~l~~dp~~R~s~~~~l~ 279 (477)
..++..+.+++.+||+.||.+|||+.++++
T Consensus 273 ~~~~~~l~~li~~cl~~dp~~RPs~~~i~~ 302 (373)
T 2qol_A 273 MDCPAALYQLMLDCWQKDRNNRPKFEQIVS 302 (373)
T ss_dssp TTCBHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred ccccHHHHHHHHHHhCcChhhCcCHHHHHH
Confidence 468899999999999999999999999875
|
| >2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-45 Score=350.64 Aligned_cols=248 Identities=23% Similarity=0.397 Sum_probs=211.1
Q ss_pred ccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEe---
Q 042823 19 EDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYED--- 95 (477)
Q Consensus 19 ~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~--- 95 (477)
..+..+|++++.||+|+||.||+|.+..+++.||+|++.... ..+.+|+.++..+ +||||+++++++..
T Consensus 7 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-------~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~ 78 (284)
T 2a19_B 7 KRFGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN-------EKAEREVKALAKL-DHVNIVHYNGCWDGFDY 78 (284)
T ss_dssp HHHHHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS-------GGGHHHHHHHHHC-CCTTBCCEEEEEEEEEE
T ss_pred chhccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc-------HHHHHHHHHHHhC-CCCCEEEEeeeEecccc
Confidence 356778999999999999999999999999999999986542 2356899999999 79999999999864
Q ss_pred -------------CCeEEEEEeccCCCchHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeec
Q 042823 96 -------------ETAVHVVMELCEGGDLFDRIIAK--GYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISR 160 (477)
Q Consensus 96 -------------~~~~~lv~e~~~gg~L~~~l~~~--~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~ 160 (477)
...+|+|||||++|+|.+++... ..+++..+..++.||+.||.|||++||+||||||+||++
T Consensus 79 ~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~--- 155 (284)
T 2a19_B 79 DPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFL--- 155 (284)
T ss_dssp C---------CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE---
T ss_pred CcccccccccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCHHHEEE---
Confidence 45689999999999999999764 578999999999999999999999999999999999999
Q ss_pred CCCCCEEEeecCCccccCCCcceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHc
Q 042823 161 DDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQ 239 (477)
Q Consensus 161 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~ 239 (477)
+.++.+||+|||++.............||+.|+|||++.+ .++.++|||||||++|+|++|..|+... ......+..
T Consensus 156 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~--~~~~~~~~~ 233 (284)
T 2a19_B 156 VDTKQVKIGDFGLVTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFET--SKFFTDLRD 233 (284)
T ss_dssp EETTEEEECCCTTCEESSCCSCCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHH--HHHHHHHHT
T ss_pred cCCCCEEECcchhheeccccccccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhH--HHHHHHhhc
Confidence 5677899999999987765554556679999999999875 5899999999999999999999987432 223333333
Q ss_pred CCccCCCCCCCCCCHHHHHHHHHhcccCccccCCHHHHhcCcccCc
Q 042823 240 GEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRE 285 (477)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~ 285 (477)
+.. .+.+++.+.++|.+||+.||.+|||+.++++|++.-.
T Consensus 234 ~~~------~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~ 273 (284)
T 2a19_B 234 GII------SDIFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWK 273 (284)
T ss_dssp TCC------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHT
T ss_pred ccc------cccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHh
Confidence 321 2457899999999999999999999999999987543
|
| >3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-45 Score=343.53 Aligned_cols=248 Identities=21% Similarity=0.319 Sum_probs=213.7
Q ss_pred ccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEE
Q 042823 21 VMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVH 100 (477)
Q Consensus 21 ~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~ 100 (477)
-.++|++.+.||+|+||.||+|.+. +++.||+|++..... ....+.+|+.++..+ +||||+++++++.+.+.+|
T Consensus 6 ~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vaiK~~~~~~~----~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~ 79 (267)
T 3t9t_A 6 DPSELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAM----SEEDFIEEAEVMMKL-SHPKLVQLYGVCLEQAPIC 79 (267)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTTTB----CHHHHHHHHHHHHTC-CCTTBCCEEEEECSSSSCE
T ss_pred chhheeeeeEecCCCceeEEEEEec-CCCeEEEEEccccCC----CHHHHHHHHHHHHhC-CCCCEeeEEEEEccCCCeE
Confidence 3568999999999999999999986 677899999875432 235688999999999 7999999999999999999
Q ss_pred EEEeccCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCC
Q 042823 101 VVMELCEGGDLFDRIIAK-GYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEE 179 (477)
Q Consensus 101 lv~e~~~gg~L~~~l~~~-~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~ 179 (477)
+||||++|++|.+++... +.+++..+..++.|++.||.|||++|++||||||+||++ +.++.+||+|||++.....
T Consensus 80 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nili---~~~~~~kl~dfg~~~~~~~ 156 (267)
T 3t9t_A 80 LVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLV---GENQVIKVSDFGMTRFVLD 156 (267)
T ss_dssp EEECCCTTCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEE---CGGGCEEECCTTGGGGBCC
T ss_pred EEEeCCCCCcHHHHHhhCcccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEE---CCCCCEEEccccccccccc
Confidence 999999999999999875 568999999999999999999999999999999999999 6778899999999876543
Q ss_pred Cc--ceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhh-CCCCCCCCChhhHHHHHHcCCccCCCCCCCCCCHH
Q 042823 180 GQ--VYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQGEIDFDTDPWPSISST 255 (477)
Q Consensus 180 ~~--~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~t-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 255 (477)
.. ......+|+.|+|||++.+ .++.++||||||+++|+|++ |.+||...........+..+..... ...+++.
T Consensus 157 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~i~~~~~~~~---~~~~~~~ 233 (267)
T 3t9t_A 157 DQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYK---PRLASTH 233 (267)
T ss_dssp HHHHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCCCC---CTTSCHH
T ss_pred ccccccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHHHHHHHHhcCCcCCC---CccCcHH
Confidence 22 1123467788999999874 68899999999999999999 9999998888877777776643222 2457899
Q ss_pred HHHHHHHhcccCccccCCHHHHhcC
Q 042823 256 AKDLVRRMLTKDPKRRITAAQVLEH 280 (477)
Q Consensus 256 ~~~li~~~l~~dp~~R~s~~~~l~h 280 (477)
+.+++.+||+.||++|||+.+++++
T Consensus 234 l~~li~~~l~~~p~~Rps~~~ll~~ 258 (267)
T 3t9t_A 234 VYQIMNHCWRERPEDRPAFSRLLRQ 258 (267)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHHHHHccCChhhCcCHHHHHHH
Confidence 9999999999999999999999864
|
| >3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.2e-46 Score=359.28 Aligned_cols=249 Identities=18% Similarity=0.226 Sum_probs=206.1
Q ss_pred cccccccccccccCCeEEEEEEEccCCce----EEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCC
Q 042823 22 MLHYFFGRMLGRGQFGVSYLCTENSTNRP----YACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDET 97 (477)
Q Consensus 22 ~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~----~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~ 97 (477)
.++|++.+.||+|+||+||+|.+..+++. ||+|.+..... ......+.+|+.++..+ +||||+++++++. ..
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~--~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~-~~ 87 (325)
T 3kex_A 12 ETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSG--RQSFQAVTDHMLAIGSL-DHAHIVRLLGLCP-GS 87 (325)
T ss_dssp TTTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTS--CSCBCSCCHHHHHHHTC-CCTTBCCEEEEEC-BS
T ss_pred HhHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEecccccc--HHHHHHHHHHHHHHhcC-CCCCcCeEEEEEc-CC
Confidence 45899999999999999999999888876 66666543221 11223456788898888 7999999999886 55
Q ss_pred eEEEEEeccCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccc
Q 042823 98 AVHVVMELCEGGDLFDRIIAK-GYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALL 176 (477)
Q Consensus 98 ~~~lv~e~~~gg~L~~~l~~~-~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~ 176 (477)
..++||||+.||+|.+++... +.+++..+..++.||+.||.|||++||+||||||+||++ +.++.+||+|||++..
T Consensus 88 ~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~---~~~~~~kl~Dfg~a~~ 164 (325)
T 3kex_A 88 SLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHGMVHRNLAARNVLL---KSPSQVQVADFGVADL 164 (325)
T ss_dssp SEEEEEECCTTCBSHHHHHSSGGGSCTTHHHHHHHHHHHHHHHHHHTTCCCSCCSSTTEEE---SSSSCEEECSCSGGGG
T ss_pred ccEEEEEeCCCCCHHHHHHHccccCCHHHHHHHHHHHHHHHHHHHhCCCCCCccchheEEE---CCCCeEEECCCCcccc
Confidence 689999999999999999874 578999999999999999999999999999999999999 7788999999999987
Q ss_pred cCCCc---ceecccccccccchhhhh-hhcCCccchHhHHHHHHHHhh-CCCCCCCCChhhHHHHHHcCCccCCCCCCCC
Q 042823 177 FEEGQ---VYRDIVGSGFYIAPEVLR-RRYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQGEIDFDTDPWPS 251 (477)
Q Consensus 177 ~~~~~---~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~l~t-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 251 (477)
..... ......||+.|+|||++. +.++.++|||||||++|+|+| |..||.+.........+..+.....+ ..
T Consensus 165 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~---~~ 241 (325)
T 3kex_A 165 LPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLEKGERLAQP---QI 241 (325)
T ss_dssp SCCCTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTHHHHHHHTTCBCCCC---TT
T ss_pred cCcccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHHHHHHHHHcCCCCCCC---Cc
Confidence 64332 223456788999999987 468999999999999999999 99999988877777777665432222 34
Q ss_pred CCHHHHHHHHHhcccCccccCCHHHHhcC
Q 042823 252 ISSTAKDLVRRMLTKDPKRRITAAQVLEH 280 (477)
Q Consensus 252 ~~~~~~~li~~~l~~dp~~R~s~~~~l~h 280 (477)
+++++.+++.+||..||.+|||+.++++|
T Consensus 242 ~~~~~~~li~~~l~~dp~~Rps~~el~~~ 270 (325)
T 3kex_A 242 CTIDVYMVMVKCWMIDENIRPTFKELANE 270 (325)
T ss_dssp BCTTTTHHHHHHTCSCTTTSCCHHHHHHH
T ss_pred CcHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 67889999999999999999999999875
|
| >1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-45 Score=370.12 Aligned_cols=254 Identities=19% Similarity=0.277 Sum_probs=216.4
Q ss_pred ccccccccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEE
Q 042823 13 ILGKAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKST 92 (477)
Q Consensus 13 ~~~~~~~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~ 92 (477)
.....++...++|.+.+.||+|+||.||+|.++ ++..||||++.... .....+.+|+.++..+ +||||++++++
T Consensus 178 ~~~~~~~i~~~~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l-~h~~iv~l~~~ 251 (454)
T 1qcf_A 178 WEKDAWEIPRESLKLEKKLGAGQFGEVWMATYN-KHTKVAVKTMKPGS----MSVEAFLAEANVMKTL-QHDKLVKLHAV 251 (454)
T ss_dssp CCTTCSBCCGGGEEEEEEEECCSSEEEEEEEET-TTEEEEEEEECTTS----BCHHHHHHHHHHHTTC-CCTTBCCEEEE
T ss_pred ccccceeechHHeEEEEEcccCCceEEEEEEEC-CccEEEEEEecCCC----ccHHHHHHHHHHHhhC-CCCCEeeEEEE
Confidence 345667778889999999999999999999985 46789999986543 2356788999999999 79999999999
Q ss_pred EEeCCeEEEEEeccCCCchHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEee
Q 042823 93 YEDETAVHVVMELCEGGDLFDRIIAK--GYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTD 170 (477)
Q Consensus 93 ~~~~~~~~lv~e~~~gg~L~~~l~~~--~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~D 170 (477)
+. ...+|+|||||++|+|.+++... ..++...+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|
T Consensus 252 ~~-~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill---~~~~~~kl~D 327 (454)
T 1qcf_A 252 VT-KEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILV---SASLVCKIAD 327 (454)
T ss_dssp EC-SSSCEEEECCCTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEE---CTTCCEEECS
T ss_pred Ee-CCccEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHEEE---CCCCcEEEee
Confidence 86 56789999999999999999754 368999999999999999999999999999999999999 7788999999
Q ss_pred cCCccccCCCcc--eecccccccccchhhhh-hhcCCccchHhHHHHHHHHhh-CCCCCCCCChhhHHHHHHcCCccCCC
Q 042823 171 FGSALLFEEGQV--YRDIVGSGFYIAPEVLR-RRYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQGEIDFDT 246 (477)
Q Consensus 171 fg~a~~~~~~~~--~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~l~t-g~~pf~~~~~~~~~~~i~~~~~~~~~ 246 (477)
||++........ .....+|+.|+|||++. +.++.++|||||||++|+|+| |..||.+.+..+....+..+.. .
T Consensus 328 FG~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~~~-~-- 404 (454)
T 1qcf_A 328 FGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYR-M-- 404 (454)
T ss_dssp TTGGGGBCCHHHHTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHHTCC-C--
T ss_pred CCCceEcCCCceeccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCC-C--
Confidence 999987643221 12335677899999987 468999999999999999999 9999999888888777766532 1
Q ss_pred CCCCCCCHHHHHHHHHhcccCccccCCHHHHhc
Q 042823 247 DPWPSISSTAKDLVRRMLTKDPKRRITAAQVLE 279 (477)
Q Consensus 247 ~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~ 279 (477)
+....+|+++.++|.+||+.||++|||+.++++
T Consensus 405 ~~~~~~~~~l~~li~~cl~~dp~~RPt~~~i~~ 437 (454)
T 1qcf_A 405 PRPENCPEELYNIMMRCWKNRPEERPTFEYIQS 437 (454)
T ss_dssp CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHccCChhHCcCHHHHHH
Confidence 222468999999999999999999999999875
|
| >1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-45 Score=369.83 Aligned_cols=264 Identities=23% Similarity=0.319 Sum_probs=218.2
Q ss_pred CCCCcCCCCCccccccccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccC
Q 042823 3 CSVSKNQRDPILGKAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSG 82 (477)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~ 82 (477)
|..++++..+.....++...++|++.+.||+|+||.||+|.++. +..||+|++..... ..+.+.+|+.++..+ +
T Consensus 164 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~~----~~~~~~~E~~~l~~l-~ 237 (452)
T 1fmk_A 164 CPTSKPQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNG-TTRVAIKTLKPGTM----SPEAFLQEAQVMKKL-R 237 (452)
T ss_dssp CCCCCCCCSSSSTTCSBCCGGGEEEEEEEEECSSCEEEEEEETT-TEEEEEEECCTTSS----CHHHHHHHHHHHHHC-C
T ss_pred ccccccccCCCCccccccChhHceeeeeecCCCCeEEEEEEECC-CceEEEEEeccCCC----CHHHHHHHHHHHHhC-C
Confidence 45555665566667778888999999999999999999999864 46799999865432 245788999999999 7
Q ss_pred CCCeeEEEEEEEeCCeEEEEEeccCCCchHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeec
Q 042823 83 QPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIA--KGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISR 160 (477)
Q Consensus 83 hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~--~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~ 160 (477)
||||+++++++.+ ..+|+|||||+||+|.+++.. ...+++.++..++.||+.||.|||++||+||||||+|||+
T Consensus 238 hp~iv~~~~~~~~-~~~~iv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~Nill--- 313 (452)
T 1fmk_A 238 HEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILV--- 313 (452)
T ss_dssp CTTBCCEEEEECS-SSCEEEECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE---
T ss_pred CCCEeeEEEEEcC-CceEEEehhhcCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEE---
Confidence 9999999999876 678999999999999999975 3568999999999999999999999999999999999999
Q ss_pred CCCCCEEEeecCCccccCCCcc--eecccccccccchhhhh-hhcCCccchHhHHHHHHHHhh-CCCCCCCCChhhHHHH
Q 042823 161 DDNALLKVTDFGSALLFEEGQV--YRDIVGSGFYIAPEVLR-RRYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDA 236 (477)
Q Consensus 161 ~~~~~~kl~Dfg~a~~~~~~~~--~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~l~t-g~~pf~~~~~~~~~~~ 236 (477)
+.++.+||+|||++........ .....+|+.|+|||++. +.++.++|||||||++|+|+| |..||.+....+....
T Consensus 314 ~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~ 393 (452)
T 1fmk_A 314 GENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQ 393 (452)
T ss_dssp CGGGCEEECCCCTTC--------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHH
T ss_pred CCCCCEEECCCccceecCCCceecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHHHHHHH
Confidence 6778999999999987643321 22345678899999986 468999999999999999999 9999998888888777
Q ss_pred HHcCCccCCCCCCCCCCHHHHHHHHHhcccCccccCCHHHHhc
Q 042823 237 ILQGEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLE 279 (477)
Q Consensus 237 i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~ 279 (477)
+..+... +..+.+|+.+.++|.+||+.||++|||+.++++
T Consensus 394 i~~~~~~---~~~~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~ 433 (452)
T 1fmk_A 394 VERGYRM---PCPPECPESLHDLMCQCWRKEPEERPTFEYLQA 433 (452)
T ss_dssp HHTTCCC---CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHcCCCC---CCCCCCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 7665321 222468999999999999999999999999986
|
| >3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-45 Score=344.04 Aligned_cols=250 Identities=14% Similarity=0.189 Sum_probs=212.5
Q ss_pred ccccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeC
Q 042823 17 AYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDE 96 (477)
Q Consensus 17 ~~~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~ 96 (477)
......++|++.+.||+|+||.||+|.+. ++.||+|++..... .......+.+|+.++..+ +||||+++++++.+.
T Consensus 4 ~~~i~~~~y~~~~~lg~G~~g~V~~~~~~--~~~~avK~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~ 79 (271)
T 3kmu_A 4 HSGIDFKQLNFLTKLNENHSGELWKGRWQ--GNDIVVKVLKVRDW-STRKSRDFNEECPRLRIF-SHPNVLPVLGACQSP 79 (271)
T ss_dssp CCCCCGGGCEEEEEEEEETTEEEEEEEET--TEEEEEEEECCTTC-CHHHHHHHHHHGGGGCCC-SCTTEECEEEEECTT
T ss_pred cCCCCHHHhHHHHHhcCCCcceEEEEEEC--CeeEEEEEeccccc-CHHHHHHHHHHHHHHHhc-CCCchhheEEEEccC
Confidence 44556679999999999999999999984 88999999875432 334556788999999999 799999999999877
Q ss_pred --CeEEEEEeccCCCchHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHcC--CeeccCCCCceeeeecCCCCCEEEee
Q 042823 97 --TAVHVVMELCEGGDLFDRIIAKG--YNSERDAATVLRAIVNAVNVCHSMG--VMHRDLKPENFSFISRDDNALLKVTD 170 (477)
Q Consensus 97 --~~~~lv~e~~~gg~L~~~l~~~~--~~~~~~~~~i~~qil~~L~~lH~~~--ivH~dlkp~Nil~~~~~~~~~~kl~D 170 (477)
..+++||||++||+|.+++.... .+++..+..++.|++.||.|||++| ++||||||+||++ +.++.++|+|
T Consensus 80 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~~i~H~dikp~Nil~---~~~~~~~l~~ 156 (271)
T 3kmu_A 80 PAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVMI---DEDMTARISM 156 (271)
T ss_dssp TSSSCEEEEECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTSSSCCTTCCCSGGGEEE---CTTSCEEEEG
T ss_pred CCCCeEeeecccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCccceEEE---cCCcceeEEe
Confidence 78999999999999999998765 4899999999999999999999999 9999999999999 7788899999
Q ss_pred cCCccccCCCcceecccccccccchhhhhhh-c---CCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCC
Q 042823 171 FGSALLFEEGQVYRDIVGSGFYIAPEVLRRR-Y---GKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDT 246 (477)
Q Consensus 171 fg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~-~---~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~ 246 (477)
||++..... ....||+.|+|||++.+. + +.++|||||||++|+|++|..||...........+........
T Consensus 157 ~~~~~~~~~----~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~- 231 (271)
T 3kmu_A 157 ADVKFSFQS----PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMKVALEGLRPT- 231 (271)
T ss_dssp GGSCCTTSC----TTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHHHHHHHHSCCCCC-
T ss_pred ccceeeecc----cCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHHHHHHHHhcCCCCC-
Confidence 887765433 234789999999998753 3 3379999999999999999999998887777666665443322
Q ss_pred CCCCCCCHHHHHHHHHhcccCccccCCHHHHhc
Q 042823 247 DPWPSISSTAKDLVRRMLTKDPKRRITAAQVLE 279 (477)
Q Consensus 247 ~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~ 279 (477)
..+.+|+.+.++|.+||+.||++|||+.++++
T Consensus 232 -~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 263 (271)
T 3kmu_A 232 -IPPGISPHVSKLMKICMNEDPAKRPKFDMIVP 263 (271)
T ss_dssp -CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred -CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 23568999999999999999999999999985
|
| >3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.8e-46 Score=357.36 Aligned_cols=248 Identities=21% Similarity=0.279 Sum_probs=197.4
Q ss_pred ccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCC---
Q 042823 21 VMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDET--- 97 (477)
Q Consensus 21 ~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~--- 97 (477)
-.++|++.+.||+|+||+||+|.+. ++.||+|++.... .......+|+.++.++ +||||+++++++....
T Consensus 22 ~~~~y~~~~~lg~G~~g~Vy~~~~~--~~~vavK~~~~~~----~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~ 94 (322)
T 3soc_A 22 QSMPLQLLEVKARGRFGCVWKAQLL--NEYVAVKIFPIQD----KQSWQNEYEVYSLPGM-KHENILQFIGAEKRGTSVD 94 (322)
T ss_dssp TTEEEEEEEEEECSTTCEEEEEEET--TEEEEEEEECGGG----HHHHHHHHHHHTSTTC-CCTTBCCEEEEEEEECSSS
T ss_pred chhhchhhheecccCceEEEEEEEC--CCEEEEEEeecCc----hHHHHHHHHHHHHhcC-CCCCchhhcceeccCCCCC
Confidence 3468999999999999999999874 7899999986432 2344556788888888 7999999999998743
Q ss_pred -eEEEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHc----------CCeeccCCCCceeeeecCCCCCE
Q 042823 98 -AVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSM----------GVMHRDLKPENFSFISRDDNALL 166 (477)
Q Consensus 98 -~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~----------~ivH~dlkp~Nil~~~~~~~~~~ 166 (477)
.+|+|||||++|+|.+++... .+++..+..++.|++.||.|||+. ||+||||||+||++ +..+.+
T Consensus 95 ~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill---~~~~~~ 170 (322)
T 3soc_A 95 VDLWLITAFHEKGSLSDFLKAN-VVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLL---KNNLTA 170 (322)
T ss_dssp EEEEEEEECCTTCBHHHHHHHC-CBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEE---CTTCCE
T ss_pred ceEEEEEecCCCCCHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEE---CCCCeE
Confidence 479999999999999999764 589999999999999999999999 99999999999999 778899
Q ss_pred EEeecCCccccCCCcc---eecccccccccchhhhhh------hcCCccchHhHHHHHHHHhhCCCCCCCCChh------
Q 042823 167 KVTDFGSALLFEEGQV---YRDIVGSGFYIAPEVLRR------RYGKEIDIWSAGVILYILLSGVPPFWAETKK------ 231 (477)
Q Consensus 167 kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~------~~~~~~DiwslG~il~~l~tg~~pf~~~~~~------ 231 (477)
||+|||++........ .....||+.|+|||++.+ .++.++|||||||++|+|+||.+||.+....
T Consensus 171 kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~ 250 (322)
T 3soc_A 171 CIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFE 250 (322)
T ss_dssp EECCCTTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTH
T ss_pred EEccCCcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchh
Confidence 9999999976543322 234579999999999864 5677899999999999999999999764321
Q ss_pred ----------hHHHHHHcCCccCC-CCCCC--CCCHHHHHHHHHhcccCccccCCHHHHhc
Q 042823 232 ----------GTYDAILQGEIDFD-TDPWP--SISSTAKDLVRRMLTKDPKRRITAAQVLE 279 (477)
Q Consensus 232 ----------~~~~~i~~~~~~~~-~~~~~--~~~~~~~~li~~~l~~dp~~R~s~~~~l~ 279 (477)
.....+........ ...++ ..++++.+||.+||+.||++|||+.++++
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~ 311 (322)
T 3soc_A 251 EEIGQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGE 311 (322)
T ss_dssp HHHCSSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred hhhccCCchhhhhhhhhcccCCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 11112222111110 00011 12456999999999999999999999975
|
| >2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-45 Score=354.57 Aligned_cols=260 Identities=23% Similarity=0.318 Sum_probs=209.2
Q ss_pred CccccccccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEE
Q 042823 12 PILGKAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKS 91 (477)
Q Consensus 12 ~~~~~~~~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~ 91 (477)
+..++-.....++|++.+.||+|+||.||+|.+..+++.||+|++... .......+.+|+.++..+ +||||+++++
T Consensus 18 ~~~g~~~~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~h~~iv~~~~ 93 (317)
T 2buj_A 18 YFQGHMVIIDNKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCH---EQQDREEAQREADMHRLF-NHPNILRLVA 93 (317)
T ss_dssp SEEEEEEEETTEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEES---SHHHHHHHHHHHHHHHTC-CCTTBCCCCE
T ss_pred eecccEEEECCeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecC---CHHHHHHHHHHHHHHhhc-CCCCeeeEEE
Confidence 344444445567899999999999999999999999999999998653 234566788999999999 7999999999
Q ss_pred EEE----eCCeEEEEEeccCCCchHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCC
Q 042823 92 TYE----DETAVHVVMELCEGGDLFDRIIA----KGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDN 163 (477)
Q Consensus 92 ~~~----~~~~~~lv~e~~~gg~L~~~l~~----~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~ 163 (477)
++. .....|+||||+.+|+|.+++.. ...+++..++.++.||+.||.|||++||+||||||+||++ +.+
T Consensus 94 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dlkp~NIl~---~~~ 170 (317)
T 2buj_A 94 YCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNILL---GDE 170 (317)
T ss_dssp EEEEEETTEEEEEEEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE---CTT
T ss_pred EEEeccCCCceeEEEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEE---cCC
Confidence 986 34578999999999999999876 4678999999999999999999999999999999999999 778
Q ss_pred CCEEEeecCCccccCCCcc----------eecccccccccchhhhhh----hcCCccchHhHHHHHHHHhhCCCCCCCCC
Q 042823 164 ALLKVTDFGSALLFEEGQV----------YRDIVGSGFYIAPEVLRR----RYGKEIDIWSAGVILYILLSGVPPFWAET 229 (477)
Q Consensus 164 ~~~kl~Dfg~a~~~~~~~~----------~~~~~gt~~y~aPE~~~~----~~~~~~DiwslG~il~~l~tg~~pf~~~~ 229 (477)
+.+||+|||++........ .....||+.|+|||++.+ .++.++|||||||++|+|++|..||....
T Consensus 171 ~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~ 250 (317)
T 2buj_A 171 GQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVF 250 (317)
T ss_dssp SCEEECCCSSCEESCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHH
T ss_pred CCEEEEecCcchhcccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhh
Confidence 8999999998875432110 123457999999999863 37899999999999999999999995421
Q ss_pred --hhhHHHHHHcCCccCCCCCCCCCCHHHHHHHHHhcccCccccCCHHHHhcCc
Q 042823 230 --KKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHP 281 (477)
Q Consensus 230 --~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~ 281 (477)
.......+.. .... +..+.+++.+.++|.+||+.||.+|||+.+++++-
T Consensus 251 ~~~~~~~~~~~~-~~~~--~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L 301 (317)
T 2buj_A 251 QKGDSVALAVQN-QLSI--PQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQL 301 (317)
T ss_dssp HTTSCHHHHHHC-C--C--CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred cccchhhHHhhc-cCCC--CccccCCHHHHHHHHHHhhcChhhCCCHHHHHHHh
Confidence 1122222222 2222 22357899999999999999999999999999863
|
| >1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-45 Score=347.01 Aligned_cols=251 Identities=20% Similarity=0.238 Sum_probs=210.4
Q ss_pred cccccccccc-cccccCCeEEEEEEE--ccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeC
Q 042823 20 DVMLHYFFGR-MLGRGQFGVSYLCTE--NSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDE 96 (477)
Q Consensus 20 ~~~~~Y~~~~-~iG~G~~g~V~~~~~--~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~ 96 (477)
....+|.+.+ .||+|+||.||+|.+ ..+++.||+|++..... .......+.+|+.++..+ +||||+++++++ ..
T Consensus 13 ~~~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~-~~ 89 (291)
T 1xbb_A 13 LDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEAN-DPALKDELLAEANVMQQL-DNPYIVRMIGIC-EA 89 (291)
T ss_dssp CCGGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC------CHHHHHHHHHHHHHHTC-CCTTBCCEEEEE-ES
T ss_pred ecchhhhhccCccccccCeeeEeeeecCCCceeeEEEEeeccccc-CHHHHHHHHHHHHHHHhC-CCCCEEEEEEEE-CC
Confidence 3356899988 999999999999954 56788999999865432 223466788999999999 799999999999 56
Q ss_pred CeEEEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccc
Q 042823 97 TAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALL 176 (477)
Q Consensus 97 ~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~ 176 (477)
+.+|+||||++|++|.+++...+.+++..+..++.||+.||.|||++||+||||||+||++ +.++.+||+|||++..
T Consensus 90 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nil~---~~~~~~kl~Dfg~~~~ 166 (291)
T 1xbb_A 90 ESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLL---VTQHYAKISDFGLSKA 166 (291)
T ss_dssp SSEEEEEECCTTEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE---EETTEEEECCCTTCEE
T ss_pred CCcEEEEEeCCCCCHHHHHHhCcCCCHHHHHHHHHHHHHHHHHHHhCCeEcCCCCcceEEE---eCCCcEEEccCCccee
Confidence 7789999999999999999998889999999999999999999999999999999999999 5667899999999987
Q ss_pred cCCCcce----ecccccccccchhhhhh-hcCCccchHhHHHHHHHHhh-CCCCCCCCChhhHHHHHHcCCccCCCCCCC
Q 042823 177 FEEGQVY----RDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQGEIDFDTDPWP 250 (477)
Q Consensus 177 ~~~~~~~----~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~t-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~ 250 (477)
....... ....+|+.|+|||++.+ .++.++||||||+++|+|++ |..||.+.........+..+... ...+
T Consensus 167 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~---~~~~ 243 (291)
T 1xbb_A 167 LRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERM---GCPA 243 (291)
T ss_dssp CCTTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCC---CCCT
T ss_pred eccCCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCC---CCCC
Confidence 6443321 22346788999999865 58889999999999999999 99999988887777777665422 1224
Q ss_pred CCCHHHHHHHHHhcccCccccCCHHHHhc
Q 042823 251 SISSTAKDLVRRMLTKDPKRRITAAQVLE 279 (477)
Q Consensus 251 ~~~~~~~~li~~~l~~dp~~R~s~~~~l~ 279 (477)
.+++.+.++|.+||+.||.+|||+.++++
T Consensus 244 ~~~~~l~~li~~~l~~dp~~Rps~~~l~~ 272 (291)
T 1xbb_A 244 GCPREMYDLMNLCWTYDVENRPGFAAVEL 272 (291)
T ss_dssp TCCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred CCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 68999999999999999999999999875
|
| >4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7e-45 Score=348.09 Aligned_cols=257 Identities=22% Similarity=0.285 Sum_probs=206.9
Q ss_pred cccccccccccccccccccccCCeEEEEEE----EccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEE
Q 042823 14 LGKAYEDVMLHYFFGRMLGRGQFGVSYLCT----ENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEF 89 (477)
Q Consensus 14 ~~~~~~~~~~~Y~~~~~iG~G~~g~V~~~~----~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~ 89 (477)
...+..-...+|++++.||+|+||.||+|. +..+++.||+|++..... ......+.+|+.++..+ +||||+++
T Consensus 12 ~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l-~h~~i~~~ 88 (302)
T 4e5w_A 12 EVDPTHFEKRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESG--GNHIADLKKEIEILRNL-YHENIVKY 88 (302)
T ss_dssp CCCTTBCCGGGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-------CCHHHHHHHHHHHHTC-CCTTBCCE
T ss_pred ecChhhhhhhhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEeccccc--chhHHHHHHHHHHHHhC-CCCCeeee
Confidence 344555556789999999999999999998 567899999999865432 23456788999999999 79999999
Q ss_pred EEEEEeC--CeEEEEEeccCCCchHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCE
Q 042823 90 KSTYEDE--TAVHVVMELCEGGDLFDRIIA-KGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALL 166 (477)
Q Consensus 90 ~~~~~~~--~~~~lv~e~~~gg~L~~~l~~-~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~ 166 (477)
++++... ..+|+||||++||+|.+++.. ...+++..+..++.|++.||.|||++||+||||||+||++ +.++.+
T Consensus 89 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~---~~~~~~ 165 (302)
T 4e5w_A 89 KGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLV---ESEHQV 165 (302)
T ss_dssp EEEEEC---CCEEEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE---EETTEE
T ss_pred eeEEecCCCceEEEEEEeCCCCcHHHHHHhccccCCHHHHHHHHHHHHHHHHHhhcCCcccCCCchheEEE---cCCCCE
Confidence 9999876 679999999999999999955 4579999999999999999999999999999999999999 566789
Q ss_pred EEeecCCccccCCCcc----eecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCC------------
Q 042823 167 KVTDFGSALLFEEGQV----YRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAET------------ 229 (477)
Q Consensus 167 kl~Dfg~a~~~~~~~~----~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~------------ 229 (477)
||+|||++........ .....||+.|+|||++.+ .++.++|||||||++|+|++|..|+....
T Consensus 166 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~ 245 (302)
T 4e5w_A 166 KIGDFGLTKAIETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHG 245 (302)
T ss_dssp EECCCTTCEECCTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCG
T ss_pred EECcccccccccCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCccc
Confidence 9999999987654432 234568888999999865 58889999999999999999998863221
Q ss_pred --hh-hHHHHHHcCCccCCCCCCCCCCHHHHHHHHHhcccCccccCCHHHHhc
Q 042823 230 --KK-GTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLE 279 (477)
Q Consensus 230 --~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~ 279 (477)
.. .....+..+. . ....+.+|+.+.++|.+||+.||.+|||+.++++
T Consensus 246 ~~~~~~~~~~~~~~~-~--~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 295 (302)
T 4e5w_A 246 QMTVTRLVNTLKEGK-R--LPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIE 295 (302)
T ss_dssp GGHHHHHHHHHHTTC-C--CCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHH
T ss_pred ccCHHHHHHHHhccC-C--CCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHH
Confidence 11 1112222221 1 2223578999999999999999999999999975
|
| >1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=7.3e-45 Score=345.45 Aligned_cols=254 Identities=21% Similarity=0.254 Sum_probs=213.3
Q ss_pred ccccccccccc-cccccCCeEEEEEEEc--cCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEe
Q 042823 19 EDVMLHYFFGR-MLGRGQFGVSYLCTEN--STNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYED 95 (477)
Q Consensus 19 ~~~~~~Y~~~~-~iG~G~~g~V~~~~~~--~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~ 95 (477)
..-.++|.+.+ .||+|+||.||+|.+. .++..||+|++.... .......+.+|+.++..+ +||||+++++++ .
T Consensus 5 ~~~~~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~-~ 80 (287)
T 1u59_A 5 FLKRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGT--EKADTEEMMREAQIMHQL-DNPYIVRLIGVC-Q 80 (287)
T ss_dssp BCCGGGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSC--CHHHHHHHHHHHHHHHHC-CCTTBCCEEEEE-E
T ss_pred cccHHHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCcc--chhHHHHHHHHHHHHHhC-CCCCEeEEEEEe-c
Confidence 34456788876 9999999999999864 467889999986542 334567788999999999 799999999999 4
Q ss_pred CCeEEEEEeccCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCc
Q 042823 96 ETAVHVVMELCEGGDLFDRIIAK-GYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSA 174 (477)
Q Consensus 96 ~~~~~lv~e~~~gg~L~~~l~~~-~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a 174 (477)
.+.+|+||||++|++|.+++... ..+++..+..++.|++.||.|||++||+||||||+||++ +.++.+||+|||++
T Consensus 81 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili---~~~~~~kl~Dfg~~ 157 (287)
T 1u59_A 81 AEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLL---VNRHYAKISDFGLS 157 (287)
T ss_dssp SSSEEEEEECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE---EETTEEEECCCTTC
T ss_pred CCCcEEEEEeCCCCCHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCchheEEE---cCCCCEEECcccce
Confidence 56799999999999999998654 568999999999999999999999999999999999999 56678999999999
Q ss_pred cccCCCcce----ecccccccccchhhhhh-hcCCccchHhHHHHHHHHhh-CCCCCCCCChhhHHHHHHcCCccCCCCC
Q 042823 175 LLFEEGQVY----RDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQGEIDFDTDP 248 (477)
Q Consensus 175 ~~~~~~~~~----~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~t-g~~pf~~~~~~~~~~~i~~~~~~~~~~~ 248 (477)
......... ....||+.|+|||++.+ .++.++|||||||++|+|++ |..||...........+..+... ..
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~i~~~~~~---~~ 234 (287)
T 1u59_A 158 KALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRM---EC 234 (287)
T ss_dssp EECTTCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHHHHHHTTCCC---CC
T ss_pred eeeccCcceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHhcCCcC---CC
Confidence 876443221 22356889999999874 68999999999999999998 99999988877777777665432 12
Q ss_pred CCCCCHHHHHHHHHhcccCccccCCHHHHhcCcc
Q 042823 249 WPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPW 282 (477)
Q Consensus 249 ~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~ 282 (477)
.+.+|+.+.++|.+||+.||++|||+.++++|.+
T Consensus 235 ~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~ 268 (287)
T 1u59_A 235 PPECPPELYALMSDCWIYKWEDRPDFLTVEQRMR 268 (287)
T ss_dssp CTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHH
T ss_pred CCCcCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 2578999999999999999999999999998653
|
| >1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A | Back alignment and structure |
|---|
Probab=100.00 E-value=9.3e-45 Score=366.16 Aligned_cols=248 Identities=22% Similarity=0.288 Sum_probs=211.4
Q ss_pred cccccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEe
Q 042823 16 KAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYED 95 (477)
Q Consensus 16 ~~~~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~ 95 (477)
..++...++|++.+.||+|+||.||+|.++ ++.||||++.... ....+.+|+.++.++ +||||+++++++..
T Consensus 186 ~~~~i~~~~~~~~~~lG~G~fg~V~~~~~~--~~~vavK~~~~~~-----~~~~~~~E~~~l~~l-~h~niv~~~~~~~~ 257 (450)
T 1k9a_A 186 SGWALNMKELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKNDA-----TAQAFLAEASVMTQL-RHSNLVQLLGVIVE 257 (450)
T ss_dssp TTCBCCGGGEEEEEEEEECSSEEEEEEEET--TEEEEEEEESSCT-----TSHHHHHHHHHHHTC-CCTTBCCEEEEEEC
T ss_pred cccccChHHeEEEeeecCcCCeeEEEEEec--CCeEEEEEeCCch-----HHHHHHHHHHHHHhc-cCCCEEEEEEEEEc
Confidence 344566788999999999999999999874 7899999986532 345688999999999 79999999999876
Q ss_pred CC-eEEEEEeccCCCchHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecC
Q 042823 96 ET-AVHVVMELCEGGDLFDRIIAKGY--NSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFG 172 (477)
Q Consensus 96 ~~-~~~lv~e~~~gg~L~~~l~~~~~--~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg 172 (477)
.. .+|+|||||+||+|.+++...+. +++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||
T Consensus 258 ~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill---~~~~~~kl~DfG 334 (450)
T 1k9a_A 258 EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLV---SEDNVAKVSDFG 334 (450)
T ss_dssp TTSCEEEEEECCTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEE---CTTSCEEECCCT
T ss_pred CCCceEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEE---CCCCCEEEeeCC
Confidence 55 79999999999999999987654 7999999999999999999999999999999999999 778899999999
Q ss_pred CccccCCCcceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhh-CCCCCCCCChhhHHHHHHcCCccCCCCCCC
Q 042823 173 SALLFEEGQVYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQGEIDFDTDPWP 250 (477)
Q Consensus 173 ~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~t-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~ 250 (477)
++....... ....+++.|+|||++.+ .++.++|||||||++|+|+| |..||.+....+....+..+.. ....+
T Consensus 335 ~a~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~~~---~~~p~ 409 (450)
T 1k9a_A 335 LTKEASSTQ--DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYK---MDAPD 409 (450)
T ss_dssp TCEECC--------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTTHHHHHHTTCC---CCCCT
T ss_pred Ccccccccc--cCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCC---CCCCC
Confidence 998654322 23367889999999864 68999999999999999998 9999998888888877776532 12235
Q ss_pred CCCHHHHHHHHHhcccCccccCCHHHHhc
Q 042823 251 SISSTAKDLVRRMLTKDPKRRITAAQVLE 279 (477)
Q Consensus 251 ~~~~~~~~li~~~l~~dp~~R~s~~~~l~ 279 (477)
.+|+.+.++|.+||+.||.+|||+.++++
T Consensus 410 ~~~~~l~~li~~cl~~dp~~Rpt~~~l~~ 438 (450)
T 1k9a_A 410 GCPPAVYDVMKNCWHLDAATRPTFLQLRE 438 (450)
T ss_dssp TCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred cCCHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence 68999999999999999999999999874
|
| >3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-45 Score=354.46 Aligned_cols=248 Identities=20% Similarity=0.228 Sum_probs=203.3
Q ss_pred cccccccccccccCCeEEEEEEEccCCceE----EEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCC
Q 042823 22 MLHYFFGRMLGRGQFGVSYLCTENSTNRPY----ACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDET 97 (477)
Q Consensus 22 ~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~----aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~ 97 (477)
.++|++++.||+|+||.||+|.+..+++.+ |+|.+.... .......+.+|+.++..+ +||||+++++++....
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~--~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~ 90 (327)
T 3lzb_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT--SPKANKEILDEAYVMASV-DNPHVCRLLGICLTST 90 (327)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCS--SCCCHHHHHHHHHHHTTC-CBTTBCCCCEEEESSS
T ss_pred HhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeecccc--CHHHHHHHHHHHHHHHhC-CCCCeeEEEEEEecCC
Confidence 468999999999999999999998888876 555543222 223456788999999999 7999999999998765
Q ss_pred eEEEEEeccCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccc
Q 042823 98 AVHVVMELCEGGDLFDRIIAK-GYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALL 176 (477)
Q Consensus 98 ~~~lv~e~~~gg~L~~~l~~~-~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~ 176 (477)
.++|+||+.+|+|.+++... +.+++..+..++.||+.||.|||++||+||||||+||++ +..+.+||+|||++..
T Consensus 91 -~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~---~~~~~~kL~DfG~a~~ 166 (327)
T 3lzb_A 91 -VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLV---KTPQHVKITDFGLAKL 166 (327)
T ss_dssp -EEEEECCCSSCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE---EETTEEEECCTTC---
T ss_pred -ceEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhCCCcCCCCCHHHEEE---cCCCCEEEccCcceeE
Confidence 78999999999999999874 568999999999999999999999999999999999999 5667899999999987
Q ss_pred cCCCcc---eecccccccccchhhhhh-hcCCccchHhHHHHHHHHhh-CCCCCCCCChhhHHHHHHcCCccCCCCCCCC
Q 042823 177 FEEGQV---YRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQGEIDFDTDPWPS 251 (477)
Q Consensus 177 ~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~t-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 251 (477)
...... .....||+.|+|||++.+ .++.++|||||||++|+|++ |.+||.+.........+..+.... ..+.
T Consensus 167 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~~~~~---~~~~ 243 (327)
T 3lzb_A 167 LGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLP---QPPI 243 (327)
T ss_dssp -------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCCC---CCTT
T ss_pred ccCccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCCCC---CCcc
Confidence 643322 233456888999999875 58999999999999999999 999999888877777766654222 2246
Q ss_pred CCHHHHHHHHHhcccCccccCCHHHHhc
Q 042823 252 ISSTAKDLVRRMLTKDPKRRITAAQVLE 279 (477)
Q Consensus 252 ~~~~~~~li~~~l~~dp~~R~s~~~~l~ 279 (477)
+++++.++|.+||+.||.+|||+.++++
T Consensus 244 ~~~~l~~li~~~l~~dp~~Rps~~ell~ 271 (327)
T 3lzb_A 244 CTIDVYMIMRKCWMIDADSRPKFRELII 271 (327)
T ss_dssp BCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred CCHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence 8999999999999999999999999986
|
| >3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-44 Score=343.32 Aligned_cols=253 Identities=21% Similarity=0.269 Sum_probs=209.6
Q ss_pred cccccccccccccccccCCeEEEEEEEcc---CCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEE
Q 042823 18 YEDVMLHYFFGRMLGRGQFGVSYLCTENS---TNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYE 94 (477)
Q Consensus 18 ~~~~~~~Y~~~~~iG~G~~g~V~~~~~~~---~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~ 94 (477)
+....++|.+.+.||+|+||.||+|.+.. ++..||+|++.... .......+.+|+.++..+ +||||+++++++.
T Consensus 7 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~ 83 (281)
T 3cc6_A 7 YGIAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDC--TLDNKEKFMSEAVIMKNL-DHPHIVKLIGIIE 83 (281)
T ss_dssp CSCCGGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTS--CHHHHHHHHHHHHHHHHH-CCTTBCCEEEEEC
T ss_pred ceecccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEeccccc--CchHHHHHHHHHHHHHhC-CCCCcceEEEEEc
Confidence 44556789999999999999999998754 34469999986542 234567788999999999 7999999999987
Q ss_pred eCCeEEEEEeccCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCC
Q 042823 95 DETAVHVVMELCEGGDLFDRIIAK-GYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGS 173 (477)
Q Consensus 95 ~~~~~~lv~e~~~gg~L~~~l~~~-~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~ 173 (477)
++ ..|+||||++|++|.+++... ..+++..+..++.|++.||.|||++||+||||||+||++ +.++.+||+|||+
T Consensus 84 ~~-~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~---~~~~~~kl~Dfg~ 159 (281)
T 3cc6_A 84 EE-PTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILV---ASPECVKLGDFGL 159 (281)
T ss_dssp SS-SCEEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEE---EETTEEEECCCCG
T ss_pred CC-CCEEEEecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEE---CCCCcEEeCccCC
Confidence 54 568999999999999999775 458999999999999999999999999999999999999 5667899999999
Q ss_pred ccccCCCcc--eecccccccccchhhhhh-hcCCccchHhHHHHHHHHhh-CCCCCCCCChhhHHHHHHcCCccCCCCCC
Q 042823 174 ALLFEEGQV--YRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQGEIDFDTDPW 249 (477)
Q Consensus 174 a~~~~~~~~--~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~t-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~ 249 (477)
+........ .....+|+.|+|||++.+ .++.++|||||||++|+|++ |..||...........+..+.... ..
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~~~~~~~~~~~~~---~~ 236 (281)
T 3cc6_A 160 SRYIEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGDRLP---KP 236 (281)
T ss_dssp GGCC---------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGGHHHHHHHTCCCC---CC
T ss_pred CcccccccccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHHHHHHHhcCCCCC---CC
Confidence 987644322 233457889999999874 68999999999999999998 999998877777777666553221 22
Q ss_pred CCCCHHHHHHHHHhcccCccccCCHHHHhcC
Q 042823 250 PSISSTAKDLVRRMLTKDPKRRITAAQVLEH 280 (477)
Q Consensus 250 ~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h 280 (477)
+.+++.+.++|.+||+.||++|||+.+++++
T Consensus 237 ~~~~~~l~~li~~~l~~~p~~Rps~~ell~~ 267 (281)
T 3cc6_A 237 DLCPPVLYTLMTRCWDYDPSDRPRFTELVCS 267 (281)
T ss_dssp TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred CCCCHHHHHHHHHHccCCchhCcCHHHHHHH
Confidence 4689999999999999999999999999864
|
| >3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-45 Score=348.58 Aligned_cols=254 Identities=20% Similarity=0.249 Sum_probs=207.4
Q ss_pred cccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeE
Q 042823 20 DVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAV 99 (477)
Q Consensus 20 ~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~ 99 (477)
.+.++|++.+.||+|+||.||+|.+..+++.||+|++...... ..+.+|+.++..+.+|+++..+..++......
T Consensus 6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-----~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (296)
T 3uzp_A 6 RVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH-----PQLHIESKIYKMMQGGVGIPTIRWCGAEGDYN 80 (296)
T ss_dssp EETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSSC-----CHHHHHHHHHHHHTTSTTCCCEEEEEEETTEE
T ss_pred eeccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcch-----hHHHHHHHHHHHhhcCCCCCccccccCCCCce
Confidence 4678999999999999999999999999999999998654322 34778999999996445566666666788899
Q ss_pred EEEEeccCCCchHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccC
Q 042823 100 HVVMELCEGGDLFDRIIA-KGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFE 178 (477)
Q Consensus 100 ~lv~e~~~gg~L~~~l~~-~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~ 178 (477)
|+||||+ +++|.+++.. ...+++..+..++.|++.||.|||++||+||||||+||++...+..+.+||+|||++....
T Consensus 81 ~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~ 159 (296)
T 3uzp_A 81 VMVMELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYR 159 (296)
T ss_dssp EEEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECCGGGTTCEEECCCTTCEECB
T ss_pred EEEEEec-CCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHeEEecCCCCCeEEEeeCCCccccc
Confidence 9999999 8899999974 4579999999999999999999999999999999999999544567889999999998764
Q ss_pred CCcc--------eecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCC---hhhHHHHHHcCCccCCC
Q 042823 179 EGQV--------YRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAET---KKGTYDAILQGEIDFDT 246 (477)
Q Consensus 179 ~~~~--------~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~---~~~~~~~i~~~~~~~~~ 246 (477)
.... .....||+.|+|||++.+ .++.++|||||||++|+|++|..||.+.. ....+..+.......+.
T Consensus 160 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 239 (296)
T 3uzp_A 160 DARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPI 239 (296)
T ss_dssp CTTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCH
T ss_pred ccccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccccCCch
Confidence 4322 234579999999999875 58899999999999999999999998643 22344444333322221
Q ss_pred -CCCCCCCHHHHHHHHHhcccCccccCCHHHHhc
Q 042823 247 -DPWPSISSTAKDLVRRMLTKDPKRRITAAQVLE 279 (477)
Q Consensus 247 -~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~ 279 (477)
...+.+|+.+.+++.+||+.||++|||+.++++
T Consensus 240 ~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~ 273 (296)
T 3uzp_A 240 EVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQ 273 (296)
T ss_dssp HHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHH
T ss_pred HHHHhhCCHHHHHHHHHHHhcCcCcCCCHHHHHH
Confidence 112467899999999999999999999999875
|
| >1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.8e-45 Score=371.24 Aligned_cols=252 Identities=20% Similarity=0.281 Sum_probs=217.4
Q ss_pred ccccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeC
Q 042823 17 AYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDE 96 (477)
Q Consensus 17 ~~~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~ 96 (477)
.++.-..+|.+.+.||+|+||.||+|.++.++..||+|++.... .....+.+|+.++.++ +||||+++++++...
T Consensus 214 ~~~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~ 288 (495)
T 1opk_A 214 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT----MEVEEFLKEAAVMKEI-KHPNLVQLLGVCTRE 288 (495)
T ss_dssp CCBCCGGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSS----SCHHHHHHHHHHHHHC-CCTTBCCEEEEECSS
T ss_pred ccccCHHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcc----cchHHHHHHHHHHHhc-CCCCEeeEEEEEecC
Confidence 45556778999999999999999999999999999999986543 2356788999999999 799999999999999
Q ss_pred CeEEEEEeccCCCchHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCc
Q 042823 97 TAVHVVMELCEGGDLFDRIIAK--GYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSA 174 (477)
Q Consensus 97 ~~~~lv~e~~~gg~L~~~l~~~--~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a 174 (477)
..+|+|||||+||+|.+++... ..+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++
T Consensus 289 ~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll---~~~~~~kl~DFG~a 365 (495)
T 1opk_A 289 PPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLV---GENHLVKVADFGLS 365 (495)
T ss_dssp SSCEEEEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE---CGGGCEEECCTTCE
T ss_pred CcEEEEEEccCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChhhEEE---CCCCcEEEeecccc
Confidence 9999999999999999999874 458999999999999999999999999999999999999 67789999999999
Q ss_pred cccCCCcc--eecccccccccchhhhhh-hcCCccchHhHHHHHHHHhh-CCCCCCCCChhhHHHHHHcCCccCCCCCCC
Q 042823 175 LLFEEGQV--YRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQGEIDFDTDPWP 250 (477)
Q Consensus 175 ~~~~~~~~--~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~t-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~ 250 (477)
........ .....+++.|+|||++.+ .++.++|||||||++|+|+| |..||.+.........+..+.. .....
T Consensus 366 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~---~~~~~ 442 (495)
T 1opk_A 366 RLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYR---MERPE 442 (495)
T ss_dssp ECCTTCCEECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTCC---CCCCT
T ss_pred eeccCCceeecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCC---CCCCC
Confidence 87644322 123356778999999874 68999999999999999999 9999998887777776655422 12235
Q ss_pred CCCHHHHHHHHHhcccCccccCCHHHHhc
Q 042823 251 SISSTAKDLVRRMLTKDPKRRITAAQVLE 279 (477)
Q Consensus 251 ~~~~~~~~li~~~l~~dp~~R~s~~~~l~ 279 (477)
.+++.+.+||.+||+.||++|||+.++++
T Consensus 443 ~~~~~l~~li~~cl~~dP~~RPs~~el~~ 471 (495)
T 1opk_A 443 GCPEKVYELMRACWQWNPSDRPSFAEIHQ 471 (495)
T ss_dssp TCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred CCCHHHHHHHHHHcCcChhHCcCHHHHHH
Confidence 68999999999999999999999999975
|
| >3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-45 Score=348.08 Aligned_cols=257 Identities=21% Similarity=0.372 Sum_probs=200.7
Q ss_pred cccccccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEE
Q 042823 14 LGKAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTY 93 (477)
Q Consensus 14 ~~~~~~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~ 93 (477)
...+++...++|++.+.||+|+||+||+|.+. ..||+|++..... .......+.+|+.++..+ +||||++++++.
T Consensus 15 ~~~~~ei~~~~y~~~~~lG~G~~g~Vy~~~~~---~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~ 89 (289)
T 3og7_A 15 AADDWEIPDGQITVGQRIGSGSFGTVYKGKWH---GDVAVKMLNVTAP-TPQQLQAFKNEVGVLRKT-RHVNILLFMGYS 89 (289)
T ss_dssp ---CCBCCTTSCEEEEEEEECSSEEEEEEESS---SEEEEEEESCSSC-CHHHHHHHHHHHHHHTTC-CCTTBCCEEEEE
T ss_pred CCCCCccCccceeeeeEecCCCCeEEEEEEEc---CceEEEEEeccCC-CHHHHHHHHHHHHHHHhC-CCCcEEEEEeec
Confidence 34567788889999999999999999999864 3599999865432 344567789999999999 799999999955
Q ss_pred EeCCeEEEEEeccCCCchHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecC
Q 042823 94 EDETAVHVVMELCEGGDLFDRIIA-KGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFG 172 (477)
Q Consensus 94 ~~~~~~~lv~e~~~gg~L~~~l~~-~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg 172 (477)
....+++|||||+|++|.+++.. ...+++..+..++.|++.||.|||++||+||||||+||++ +.++.+||+|||
T Consensus 90 -~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~Dlkp~Nil~---~~~~~~kl~Dfg 165 (289)
T 3og7_A 90 -TAPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFL---HEDNTVKIGDFG 165 (289)
T ss_dssp -CSSSCEEEEECCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE---ETTTEEEECCCC
T ss_pred -cCCccEEEEEecCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCcccccCccceEEE---CCCCCEEEccce
Confidence 56678999999999999999864 4568999999999999999999999999999999999999 667889999999
Q ss_pred CccccCC---Ccceecccccccccchhhhh----hhcCCccchHhHHHHHHHHhhCCCCCCCCChhhHH-HHHHcCCccC
Q 042823 173 SALLFEE---GQVYRDIVGSGFYIAPEVLR----RRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTY-DAILQGEIDF 244 (477)
Q Consensus 173 ~a~~~~~---~~~~~~~~gt~~y~aPE~~~----~~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~-~~i~~~~~~~ 244 (477)
++..... ........||+.|+|||++. ..++.++|||||||++|+|++|..||......... ..+..+....
T Consensus 166 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~ 245 (289)
T 3og7_A 166 LATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSP 245 (289)
T ss_dssp ------------------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHHHHHHHHHHTSCCC
T ss_pred eccccccccccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHHHHHHHhcccccCc
Confidence 9876543 22234457999999999985 35788999999999999999999999886554444 3344443322
Q ss_pred C-CCCCCCCCHHHHHHHHHhcccCccccCCHHHHhc
Q 042823 245 D-TDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLE 279 (477)
Q Consensus 245 ~-~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~ 279 (477)
. ......+|+.+.+||.+||+.||.+|||+.++++
T Consensus 246 ~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~ 281 (289)
T 3og7_A 246 DLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILA 281 (289)
T ss_dssp CTTSSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred chhhccccCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence 2 1223468999999999999999999999999985
|
| >3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-45 Score=355.90 Aligned_cols=259 Identities=28% Similarity=0.440 Sum_probs=196.6
Q ss_pred CCccccccccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEE
Q 042823 11 DPILGKAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFK 90 (477)
Q Consensus 11 ~~~~~~~~~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~ 90 (477)
..+..+..+.-..+|++.+.||+|+||.||+|.+..+++.||+|++.... ......+.+|+.++.++.+||||++++
T Consensus 16 ~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~~h~~iv~~~ 92 (337)
T 3ll6_A 16 SDFVGQTVELGELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNE---EEKNRAIIQEVCFMKKLSGHPNIVQFC 92 (337)
T ss_dssp CSSTTCEEEETTEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESS---HHHHHHHHHHHHHHHHHTTSTTBCCEE
T ss_pred HHhhcceeeccCceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCc---hHHHHHHHHHHHHHHHhccCCChhhcc
Confidence 45666777777789999999999999999999999999999999985442 344567889999999997799999999
Q ss_pred EEEE--------eCCeEEEEEeccCCCchHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHcC--CeeccCCCCceee
Q 042823 91 STYE--------DETAVHVVMELCEGGDLFDRIIA---KGYNSERDAATVLRAIVNAVNVCHSMG--VMHRDLKPENFSF 157 (477)
Q Consensus 91 ~~~~--------~~~~~~lv~e~~~gg~L~~~l~~---~~~~~~~~~~~i~~qil~~L~~lH~~~--ivH~dlkp~Nil~ 157 (477)
+++. ....+++||||+. |+|.+++.. .+.+++..+..++.||+.||.|||++| |+||||||+||++
T Consensus 93 ~~~~~~~~~~~~~~~~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~ivH~Dikp~NIl~ 171 (337)
T 3ll6_A 93 SAASIGKEESDTGQAEFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLL 171 (337)
T ss_dssp EEEEECTTTSTTSSEEEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTSSSCCBCCCCCGGGCEE
T ss_pred ccccccccccccCCceEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCCCEEEccCCcccEEE
Confidence 9993 4456899999996 599888865 467999999999999999999999999 9999999999999
Q ss_pred eecCCCCCEEEeecCCccccCCCcce-------------ecccccccccchhhhh----hhcCCccchHhHHHHHHHHhh
Q 042823 158 ISRDDNALLKVTDFGSALLFEEGQVY-------------RDIVGSGFYIAPEVLR----RRYGKEIDIWSAGVILYILLS 220 (477)
Q Consensus 158 ~~~~~~~~~kl~Dfg~a~~~~~~~~~-------------~~~~gt~~y~aPE~~~----~~~~~~~DiwslG~il~~l~t 220 (477)
+.++.+||+|||++......... ....||+.|+|||++. ..++.++|||||||++|+|++
T Consensus 172 ---~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~ 248 (337)
T 3ll6_A 172 ---SNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCF 248 (337)
T ss_dssp ---CTTSCEEBCCCTTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHH
T ss_pred ---CCCCCEEEecCccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHh
Confidence 77789999999999876543221 1346899999999983 357889999999999999999
Q ss_pred CCCCCCCCChhhHHHHHHcCCccCCCCCCCCCCHHHHHHHHHhcccCccccCCHHHHhcCcc
Q 042823 221 GVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPW 282 (477)
Q Consensus 221 g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~ 282 (477)
|..||........ ..+.... ......++.+.+||.+||+.||.+|||+.++++|.+
T Consensus 249 g~~p~~~~~~~~~----~~~~~~~--~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~ 304 (337)
T 3ll6_A 249 RQHPFEDGAKLRI----VNGKYSI--PPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQ 304 (337)
T ss_dssp SSCCC----------------CCC--CTTCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHH
T ss_pred CCCCCcchhHHHh----hcCcccC--CcccccchHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 9999976543322 2222222 223467788999999999999999999999998743
|
| >3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-45 Score=362.44 Aligned_cols=256 Identities=16% Similarity=0.140 Sum_probs=195.9
Q ss_pred ccccccccccccccCCeEEEEEEEccC-----CceEEEEEeecCCccchhhH--------HHHHHHHHHHHhccCCCCee
Q 042823 21 VMLHYFFGRMLGRGQFGVSYLCTENST-----NRPYACKSIAKKPKMRLAEN--------DMIRREIQIRLYLSGQPNVV 87 (477)
Q Consensus 21 ~~~~Y~~~~~iG~G~~g~V~~~~~~~~-----~~~~aiK~~~~~~~~~~~~~--------~~~~~e~~~~~~l~~hpniv 87 (477)
..++|++++.||+|+||.||+|.++.+ ++.||+|++.........+. .....|+..+..+ .||||+
T Consensus 33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l-~h~~iv 111 (364)
T 3op5_A 33 AAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKL-KYLGVP 111 (364)
T ss_dssp TCCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTC-SCCCSC
T ss_pred CCCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhc-cCCCCC
Confidence 345899999999999999999998765 58899999875432111111 1122334444455 699999
Q ss_pred EEEEEEEeC----CeEEEEEeccCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCC
Q 042823 88 EFKSTYEDE----TAVHVVMELCEGGDLFDRIIAK-GYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDD 162 (477)
Q Consensus 88 ~~~~~~~~~----~~~~lv~e~~~gg~L~~~l~~~-~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~ 162 (477)
++++++... ...|+||||| |++|.+++... +.+++..+..++.||+.||.|||++||+||||||+|||+.. +.
T Consensus 112 ~~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~Nill~~-~~ 189 (364)
T 3op5_A 112 KYWGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIHEHEYVHGDIKASNLLLNY-KN 189 (364)
T ss_dssp CEEEEEEEEETTEEEEEEEEECE-EEEHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEES-SC
T ss_pred eEEeeeeeccCCcceEEEEEeCC-CCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeEEecCCHHHEEEec-CC
Confidence 999998764 5689999999 99999999876 67999999999999999999999999999999999999932 26
Q ss_pred CCCEEEeecCCccccCCCcc--------eecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChhhH
Q 042823 163 NALLKVTDFGSALLFEEGQV--------YRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKGT 233 (477)
Q Consensus 163 ~~~~kl~Dfg~a~~~~~~~~--------~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~ 233 (477)
.+.+||+|||++........ .....||+.|+|||++.+ .++.++|||||||++|+|+||..||.+......
T Consensus 190 ~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~~~ 269 (364)
T 3op5_A 190 PDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKDPK 269 (364)
T ss_dssp TTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHH
T ss_pred CCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccccCHH
Confidence 78899999999976543221 133459999999999976 489999999999999999999999986433322
Q ss_pred HHHHHcCC-----ccCC--CCCCCCCCHHHHHHHHHhcccCccccCCHHHHhc
Q 042823 234 YDAILQGE-----IDFD--TDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLE 279 (477)
Q Consensus 234 ~~~i~~~~-----~~~~--~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~ 279 (477)
........ ..+. ....+.+|+++.+++..||+.||.+||++.++++
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~l~~ 322 (364)
T 3op5_A 270 YVRDSKIRYRENIASLMDKCFPAANAPGEIAKYMETVKLLDYTEKPLYENLRD 322 (364)
T ss_dssp HHHHHHHHHHHCHHHHHHHHSCTTCCCHHHHHHHHHHHTCCTTCCCCHHHHHH
T ss_pred HHHHHHHHhhhhHHHHHHHhcccccCHHHHHHHHHHHhcCCCCCCCCHHHHHH
Confidence 21111100 0000 0011467899999999999999999999999875
|
| >1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-44 Score=351.59 Aligned_cols=256 Identities=21% Similarity=0.280 Sum_probs=209.6
Q ss_pred cccccccccccccccccccCCeEEEEEEEccCC----ceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEE
Q 042823 16 KAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTN----RPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKS 91 (477)
Q Consensus 16 ~~~~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~----~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~ 91 (477)
-..+....+|.+.+.||+|+||.||+|.++.++ ..||+|++.... .......+.+|+.++..+ +||||+++++
T Consensus 37 ~~~~i~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l-~h~~iv~~~~ 113 (333)
T 1mqb_A 37 FTTEIHPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGY--TEKQRVDFLGEAGIMGQF-SHHNIIRLEG 113 (333)
T ss_dssp -CCBCCTTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTC--CHHHHHHHHHHHHHHHTC-CCTTBCCEEE
T ss_pred ccccCChHHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCC--CHHHHHHHHHHHHHHHhC-CCCCCCcEEE
Confidence 344556678999999999999999999987554 359999986432 334456788999999999 7999999999
Q ss_pred EEEeCCeEEEEEeccCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEee
Q 042823 92 TYEDETAVHVVMELCEGGDLFDRIIAK-GYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTD 170 (477)
Q Consensus 92 ~~~~~~~~~lv~e~~~gg~L~~~l~~~-~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~D 170 (477)
++...+.+|+||||++||+|.+++... +.+++..+..++.||+.||.|||++||+||||||+||++ +.++.+||+|
T Consensus 114 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~---~~~~~~kl~D 190 (333)
T 1mqb_A 114 VISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILV---NSNLVCKVSD 190 (333)
T ss_dssp EECSSSSEEEEEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE---CTTCCEEECC
T ss_pred EEecCCCcEEEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChheEEE---CCCCcEEECC
Confidence 999999999999999999999999875 578999999999999999999999999999999999999 7788999999
Q ss_pred cCCccccCCCcc----eecccccccccchhhhhh-hcCCccchHhHHHHHHHHhh-CCCCCCCCChhhHHHHHHcCCccC
Q 042823 171 FGSALLFEEGQV----YRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQGEIDF 244 (477)
Q Consensus 171 fg~a~~~~~~~~----~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~t-g~~pf~~~~~~~~~~~i~~~~~~~ 244 (477)
||++........ .....+|+.|+|||++.+ .++.++|||||||++|+|++ |..||...........+..+...
T Consensus 191 fg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~~~~~~~~~- 269 (333)
T 1mqb_A 191 FGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGFRL- 269 (333)
T ss_dssp CCC-----------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCC-
T ss_pred CCcchhhccccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHCCCcC-
Confidence 999987643321 122356788999999874 68899999999999999999 99999988887777777665321
Q ss_pred CCCCCCCCCHHHHHHHHHhcccCccccCCHHHHhcC
Q 042823 245 DTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEH 280 (477)
Q Consensus 245 ~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h 280 (477)
+....+++.+.++|.+||+.||.+|||+.+++++
T Consensus 270 --~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~ 303 (333)
T 1mqb_A 270 --PTPMDCPSAIYQLMMQCWQQERARRPKFADIVSI 303 (333)
T ss_dssp --CCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHH
T ss_pred --CCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 1224689999999999999999999999999763
|
| >2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.3e-46 Score=357.44 Aligned_cols=257 Identities=19% Similarity=0.274 Sum_probs=208.0
Q ss_pred ccccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeC
Q 042823 17 AYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDE 96 (477)
Q Consensus 17 ~~~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~ 96 (477)
......++|++.+.||+|+||.||+|.+. +++.||+|++.... ......+.+|+.++..+ +||||+++++++...
T Consensus 33 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~ 107 (321)
T 2qkw_B 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLR-DGAKVALKRRTPES---SQGIEEFETEIETLSFC-RHPHLVSLIGFCDER 107 (321)
T ss_dssp CCCCCCCCCSCCCCSCBCSSSEEEEEECT-TCCEEEEEECCSCC---SSHHHHHHHHHHGGGSC-CCTTBCCEEEECCCT
T ss_pred HHHHHHhccCccceeecCCCeeEEEEEEC-CCCEEEEEEecccC---hHHHHHHHHHHHHHHhC-CCCCEeeEEEEEcCC
Confidence 34456789999999999999999999964 68999999876442 23456788999999988 799999999999999
Q ss_pred CeEEEEEeccCCCchHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecC
Q 042823 97 TAVHVVMELCEGGDLFDRIIAKG----YNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFG 172 (477)
Q Consensus 97 ~~~~lv~e~~~gg~L~~~l~~~~----~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg 172 (477)
+..|+||||++||+|.+++.... .+++..+..++.|++.||.|||++||+||||||+||++ +.++.+||+|||
T Consensus 108 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~---~~~~~~kl~Dfg 184 (321)
T 2qkw_B 108 NEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRAIIHRDVKSINILL---DENFVPKITDFG 184 (321)
T ss_dssp TCCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCSTTEEE---CTTCCEEECCCT
T ss_pred CeEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCCCeecCCCCHHHEEE---CCCCCEEEeecc
Confidence 99999999999999999886543 58999999999999999999999999999999999999 778899999999
Q ss_pred CccccCCC---cceecccccccccchhhhh-hhcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHH-------HHHcCC
Q 042823 173 SALLFEEG---QVYRDIVGSGFYIAPEVLR-RRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYD-------AILQGE 241 (477)
Q Consensus 173 ~a~~~~~~---~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~-------~i~~~~ 241 (477)
++...... .......||+.|+|||++. +.++.++|||||||++|+|++|..||.+........ ....+.
T Consensus 185 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 264 (321)
T 2qkw_B 185 ISKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQ 264 (321)
T ss_dssp TCEECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTTC
T ss_pred cccccccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhcccccc
Confidence 99764322 1223456899999999986 468999999999999999999999997654332111 111111
Q ss_pred cc--CCC----CCCCCCCHHHHHHHHHhcccCccccCCHHHHhcCc
Q 042823 242 ID--FDT----DPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHP 281 (477)
Q Consensus 242 ~~--~~~----~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~ 281 (477)
.. ... ...+.++..+.+++.+||+.||++|||+.+++++.
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L 310 (321)
T 2qkw_B 265 LEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKL 310 (321)
T ss_dssp CCSSSSSSCTTCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred HHHhcChhhccccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHH
Confidence 11 011 11123456789999999999999999999998764
|
| >1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-44 Score=342.09 Aligned_cols=252 Identities=20% Similarity=0.255 Sum_probs=214.1
Q ss_pred ccccccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEE
Q 042823 15 GKAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYE 94 (477)
Q Consensus 15 ~~~~~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~ 94 (477)
...++...++|++++.||+|+||.||+|.+. ++..||+|++..... ....+.+|+.++..+ +||||+++++++.
T Consensus 5 ~~~~~v~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~----~~~~~~~E~~~l~~l-~h~~i~~~~~~~~ 78 (279)
T 1qpc_A 5 EDEWEVPRETLKLVERLGAGQFGEVWMGYYN-GHTKVAVKSLKQGSM----SPDAFLAEANLMKQL-QHQRLVRLYAVVT 78 (279)
T ss_dssp TCTTBCCGGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTTSS----CHHHHHHHHHHHHHC-CCTTBCCEEEEEC
T ss_pred hhhcccCHHhhhheeeecCCCCeEEEEEEEc-CCcEEEEEEecCCcc----cHHHHHHHHHHHHhC-CCcCcceEEEEEc
Confidence 3456777889999999999999999999975 567899999865432 346788999999999 7999999999987
Q ss_pred eCCeEEEEEeccCCCchHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecC
Q 042823 95 DETAVHVVMELCEGGDLFDRIIAKG--YNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFG 172 (477)
Q Consensus 95 ~~~~~~lv~e~~~gg~L~~~l~~~~--~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg 172 (477)
. +..|+||||++|++|.+++.... .+++..+..++.|++.||.|||++||+||||||+||++ +.++.+||+|||
T Consensus 79 ~-~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~---~~~~~~kl~Dfg 154 (279)
T 1qpc_A 79 Q-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILV---SDTLSCKIADFG 154 (279)
T ss_dssp S-SSCEEEEECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE---CTTSCEEECCCT
T ss_pred C-CCcEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHhhEEE---cCCCCEEECCCc
Confidence 4 46899999999999999987543 68999999999999999999999999999999999999 778899999999
Q ss_pred CccccCCCcc--eecccccccccchhhhhh-hcCCccchHhHHHHHHHHhh-CCCCCCCCChhhHHHHHHcCCccCCCCC
Q 042823 173 SALLFEEGQV--YRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQGEIDFDTDP 248 (477)
Q Consensus 173 ~a~~~~~~~~--~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~t-g~~pf~~~~~~~~~~~i~~~~~~~~~~~ 248 (477)
++........ .....+++.|+|||++.+ .++.++|||||||++|+|++ |.+||.+....+....+..+... ..
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~---~~ 231 (279)
T 1qpc_A 155 LARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRM---VR 231 (279)
T ss_dssp TCEECSSSCEECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCC---CC
T ss_pred ccccccCcccccccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHHHHHHHHhcccCC---CC
Confidence 9987654332 123456788999999874 68999999999999999999 99999988887777777665322 22
Q ss_pred CCCCCHHHHHHHHHhcccCccccCCHHHHhc
Q 042823 249 WPSISSTAKDLVRRMLTKDPKRRITAAQVLE 279 (477)
Q Consensus 249 ~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~ 279 (477)
...+++.+.+++.+||+.||++|||+.++++
T Consensus 232 ~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~ 262 (279)
T 1qpc_A 232 PDNCPEELYQLMRLCWKERPEDRPTFDYLRS 262 (279)
T ss_dssp CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred cccccHHHHHHHHHHhccChhhCCCHHHHHH
Confidence 2468999999999999999999999999875
|
| >1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-45 Score=347.01 Aligned_cols=254 Identities=19% Similarity=0.224 Sum_probs=204.1
Q ss_pred ccccccccccccccccCCeEEEEEEEcc-CCc--eEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEe
Q 042823 19 EDVMLHYFFGRMLGRGQFGVSYLCTENS-TNR--PYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYED 95 (477)
Q Consensus 19 ~~~~~~Y~~~~~iG~G~~g~V~~~~~~~-~~~--~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~ 95 (477)
....++|++.+.||+|+||+||+|.+.. +++ .||+|++.............+.+|+.++..+ +||||+++++++..
T Consensus 14 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~ 92 (291)
T 1u46_A 14 LIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSL-DHRNLIRLYGVVLT 92 (291)
T ss_dssp ECCGGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHC-CCTTBCCEEEEECS
T ss_pred ccchhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhC-CCCCcccEEEEEcc
Confidence 3445689999999999999999998643 333 6899988655433344567888999999999 79999999999987
Q ss_pred CCeEEEEEeccCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCc
Q 042823 96 ETAVHVVMELCEGGDLFDRIIAK-GYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSA 174 (477)
Q Consensus 96 ~~~~~lv~e~~~gg~L~~~l~~~-~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a 174 (477)
+. .++||||+++|+|.+++... +.+++..+..++.|++.||.|||++|++||||||+||++ +.++.+||+|||++
T Consensus 93 ~~-~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nili---~~~~~~kl~Dfg~~ 168 (291)
T 1u46_A 93 PP-MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLL---ATRDLVKIGDFGLM 168 (291)
T ss_dssp SS-CEEEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEE---EETTEEEECCCTTC
T ss_pred CC-ceeeEecccCCCHHHHHHhccCCcCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEE---cCCCCEEEcccccc
Confidence 65 88999999999999999874 568999999999999999999999999999999999999 56678999999999
Q ss_pred cccCCCcc----eecccccccccchhhhhh-hcCCccchHhHHHHHHHHhh-CCCCCCCCChhhHHHHHHcCCccCCCCC
Q 042823 175 LLFEEGQV----YRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQGEIDFDTDP 248 (477)
Q Consensus 175 ~~~~~~~~----~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~t-g~~pf~~~~~~~~~~~i~~~~~~~~~~~ 248 (477)
........ .....+|+.|+|||++.+ .++.++||||||+++|+|++ |..||.+.........+.......+.
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~-- 246 (291)
T 1u46_A 169 RALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPR-- 246 (291)
T ss_dssp EECCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTSCCCCCC--
T ss_pred ccccccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHHHHHHHHHccCCCCCC--
Confidence 87644322 123457888999999875 57899999999999999999 99999988888887777665443332
Q ss_pred CCCCCHHHHHHHHHhcccCccccCCHHHHhc
Q 042823 249 WPSISSTAKDLVRRMLTKDPKRRITAAQVLE 279 (477)
Q Consensus 249 ~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~ 279 (477)
...+|+.+.++|.+||..||.+|||+.++++
T Consensus 247 ~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~ 277 (291)
T 1u46_A 247 PEDCPQDIYNVMVQCWAHKPEDRPTFVALRD 277 (291)
T ss_dssp CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred CcCcCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 3478999999999999999999999999986
|
| >2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-45 Score=360.76 Aligned_cols=257 Identities=14% Similarity=0.125 Sum_probs=196.8
Q ss_pred cccccccccccccccCCeEEEEEEEcc---CCceEEEEEeecCCccchhh--------HHHHHHHHHHHHhccCCCCeeE
Q 042823 20 DVMLHYFFGRMLGRGQFGVSYLCTENS---TNRPYACKSIAKKPKMRLAE--------NDMIRREIQIRLYLSGQPNVVE 88 (477)
Q Consensus 20 ~~~~~Y~~~~~iG~G~~g~V~~~~~~~---~~~~~aiK~~~~~~~~~~~~--------~~~~~~e~~~~~~l~~hpniv~ 88 (477)
...++|++++.||+|+||.||+|.+.. ++..+|+|++.........+ ...+.+|+..+..+ +||||++
T Consensus 34 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l-~h~ni~~ 112 (345)
T 2v62_A 34 MEGNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQL-DYLGIPL 112 (345)
T ss_dssp TTSCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTC-SCCCCCC
T ss_pred ccCceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccc-cccCcce
Confidence 345689999999999999999999987 88999999987543211111 12345677787888 7999999
Q ss_pred EEEEEEe----CCeEEEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCC
Q 042823 89 FKSTYED----ETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNA 164 (477)
Q Consensus 89 ~~~~~~~----~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~ 164 (477)
+++++.. ...+|+||||| |++|.+++...+.+++.++..++.||+.||.|||++||+||||||+||++... ..+
T Consensus 113 ~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~-~~~ 190 (345)
T 2v62_A 113 FYGSGLTEFKGRSYRFMVMERL-GIDLQKISGQNGTFKKSTVLQLGIRMLDVLEYIHENEYVHGDIKAANLLLGYK-NPD 190 (345)
T ss_dssp EEEEEEEESSSCEEEEEEEECE-EEEHHHHCBGGGBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEESS-STT
T ss_pred eecccccccCCCcEEEEEEecc-CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCcCHHHEEEccC-CCC
Confidence 9999988 78899999999 99999999888889999999999999999999999999999999999999432 223
Q ss_pred CEEEeecCCccccCCCc--------ceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChhh-HH
Q 042823 165 LLKVTDFGSALLFEEGQ--------VYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKG-TY 234 (477)
Q Consensus 165 ~~kl~Dfg~a~~~~~~~--------~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~-~~ 234 (477)
.+||+|||++....... ......||+.|+|||++.+ .++.++|||||||++|+|++|..||.+..... ..
T Consensus 191 ~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~ 270 (345)
T 2v62_A 191 QVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPVAV 270 (345)
T ss_dssp SEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHHHH
T ss_pred cEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccccHHH
Confidence 89999999997653321 1134579999999999876 48999999999999999999999996532221 11
Q ss_pred HHHHcCC-ccCCC-----CCCCCCCHHHHHHHHHhcccCccccCCHHHHhc
Q 042823 235 DAILQGE-IDFDT-----DPWPSISSTAKDLVRRMLTKDPKRRITAAQVLE 279 (477)
Q Consensus 235 ~~i~~~~-~~~~~-----~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~ 279 (477)
....... ...+. .....+|+++.++|.+||..||++|||+.++++
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~ 321 (345)
T 2v62_A 271 QTAKTNLLDELPQSVLKWAPSGSSCCEIAQFLVCAHSLAYDEKPNYQALKK 321 (345)
T ss_dssp HHHHHHHHHTTTHHHHHHSCTTSCCHHHHHHHHHHHTCCTTCCCCHHHHHH
T ss_pred HHHHHhhcccccHHHHhhccccccHHHHHHHHHHHhhcCcccCCCHHHHHH
Confidence 1111110 01110 011268899999999999999999999999976
|
| >3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.7e-45 Score=349.33 Aligned_cols=256 Identities=20% Similarity=0.239 Sum_probs=205.7
Q ss_pred ccccccccccccccccccCCeEEEEEEEcc---CCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEE
Q 042823 17 AYEDVMLHYFFGRMLGRGQFGVSYLCTENS---TNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTY 93 (477)
Q Consensus 17 ~~~~~~~~Y~~~~~iG~G~~g~V~~~~~~~---~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~ 93 (477)
......++|.+.+.||+|+||.||+|.+.. ++..||+|++..... .......+.+|+.++..+ +||||+++++++
T Consensus 28 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~ 105 (313)
T 3brb_A 28 DVVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNS-SQREIEEFLSEAACMKDF-SHPNVIRLLGVC 105 (313)
T ss_dssp TTBCCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CC-CHHHHHHHHHHHHHHHTC-CCTTBCCCCEEE
T ss_pred hcccCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEecccc-chhHHHHHHHHHHHHhcC-CCCCeeeeeEEE
Confidence 344556789999999999999999998765 556899999865432 334556788999999999 699999999999
Q ss_pred EeCC-----eEEEEEeccCCCchHHHHHH------cCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCC
Q 042823 94 EDET-----AVHVVMELCEGGDLFDRIIA------KGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDD 162 (477)
Q Consensus 94 ~~~~-----~~~lv~e~~~gg~L~~~l~~------~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~ 162 (477)
.... ..|+||||+++|+|.+++.. ...+++..++.++.||+.||.|||++||+||||||+||++ +.
T Consensus 106 ~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli---~~ 182 (313)
T 3brb_A 106 IEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRNFLHRDLAARNCML---RD 182 (313)
T ss_dssp EC-------CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCSGGGEEE---CT
T ss_pred eeccccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEE---cC
Confidence 7655 45999999999999999853 3568999999999999999999999999999999999999 77
Q ss_pred CCCEEEeecCCccccCCCcc---eecccccccccchhhhhh-hcCCccchHhHHHHHHHHhh-CCCCCCCCChhhHHHHH
Q 042823 163 NALLKVTDFGSALLFEEGQV---YRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAI 237 (477)
Q Consensus 163 ~~~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~t-g~~pf~~~~~~~~~~~i 237 (477)
++.+||+|||++........ .....+++.|+|||++.+ .++.++|||||||++|+|++ |.+||...........+
T Consensus 183 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~ 262 (313)
T 3brb_A 183 DMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYDYL 262 (313)
T ss_dssp TSCEEECSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHH
T ss_pred CCcEEEeecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHH
Confidence 78999999999976543321 223457889999999865 58999999999999999999 99999988888887777
Q ss_pred HcCCccCCCCCCCCCCHHHHHHHHHhcccCccccCCHHHHhcC
Q 042823 238 LQGEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEH 280 (477)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h 280 (477)
..+... ...+.+++.+.++|.+||..||.+|||+.+++++
T Consensus 263 ~~~~~~---~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~ 302 (313)
T 3brb_A 263 LHGHRL---KQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQ 302 (313)
T ss_dssp HTTCCC---CCBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred HcCCCC---CCCccccHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 765432 2235689999999999999999999999999864
|
| >4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-45 Score=347.40 Aligned_cols=254 Identities=20% Similarity=0.247 Sum_probs=202.0
Q ss_pred cccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeE
Q 042823 20 DVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAV 99 (477)
Q Consensus 20 ~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~ 99 (477)
.+.++|++.+.||+|+||.||+|.+..+++.||+|++...... ..+.+|+.++..+.+|+++..+..++......
T Consensus 6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-----~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (296)
T 4hgt_A 6 RVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH-----PQLHIESKIYKMMQGGVGIPTIRWCGAEGDYN 80 (296)
T ss_dssp -----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC---C-----CCHHHHHHHHHHHTTSTTCCCEEEEEEETTEE
T ss_pred ccCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeecccccc-----hHHHHHHHHHHHhcCCCCCCeeeeecCCCCce
Confidence 4668999999999999999999999999999999987654322 24678999999996555566666666888899
Q ss_pred EEEEeccCCCchHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccC
Q 042823 100 HVVMELCEGGDLFDRIIA-KGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFE 178 (477)
Q Consensus 100 ~lv~e~~~gg~L~~~l~~-~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~ 178 (477)
++||||+ +++|.+++.. ...+++..+..++.||+.||.|||++||+||||||+||++...+..+.+||+|||++....
T Consensus 81 ~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~ 159 (296)
T 4hgt_A 81 VMVMELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYR 159 (296)
T ss_dssp EEEEECC-CCBHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECCGGGTTCEEECCCTTCEECB
T ss_pred EEEEEcc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeeeeccCCCCeEEEecCccceecc
Confidence 9999999 8899999985 4579999999999999999999999999999999999999555567889999999998764
Q ss_pred CCcc--------eecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChh---hHHHHHHcCCccCCC
Q 042823 179 EGQV--------YRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKK---GTYDAILQGEIDFDT 246 (477)
Q Consensus 179 ~~~~--------~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~---~~~~~i~~~~~~~~~ 246 (477)
.... .....||+.|+|||++.+ .++.++|||||||++|+|++|..||.+.... .....+.......+.
T Consensus 160 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 239 (296)
T 4hgt_A 160 DARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPI 239 (296)
T ss_dssp CTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCH
T ss_pred CcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhcccccchh
Confidence 4321 234579999999999875 5889999999999999999999999774432 333333332222221
Q ss_pred C-CCCCCCHHHHHHHHHhcccCccccCCHHHHhc
Q 042823 247 D-PWPSISSTAKDLVRRMLTKDPKRRITAAQVLE 279 (477)
Q Consensus 247 ~-~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~ 279 (477)
. ..+.+|+.+.++|.+||+.||++|||+.++++
T Consensus 240 ~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~ 273 (296)
T 4hgt_A 240 EVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQ 273 (296)
T ss_dssp HHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHH
T ss_pred hhhhccCCHHHHHHHHHHHhcCCCCCCCHHHHHH
Confidence 1 12457899999999999999999999999875
|
| >3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-44 Score=350.60 Aligned_cols=248 Identities=23% Similarity=0.321 Sum_probs=205.7
Q ss_pred ccccccccccccCCeEEEEEE----EccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEE--eC
Q 042823 23 LHYFFGRMLGRGQFGVSYLCT----ENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYE--DE 96 (477)
Q Consensus 23 ~~Y~~~~~iG~G~~g~V~~~~----~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~--~~ 96 (477)
++|++.+.||+|+||.||+|. +..+++.||+|++... .......+.+|+.++..+ +||||+++++++. ..
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~ 98 (327)
T 3lxl_A 23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHS---GPDQQRDFQREIQILKAL-HSDFIVKYRGVSYGPGR 98 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSC---CHHHHHHHHHHHHHHHTC-CCTTBCCEEEEEECSSS
T ss_pred hhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccC---CHHHHHHHHHHHHHHHhc-CCCceeEEEEEEecCCC
Confidence 589999999999999999998 5678999999998654 234456789999999999 7999999999986 55
Q ss_pred CeEEEEEeccCCCchHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCcc
Q 042823 97 TAVHVVMELCEGGDLFDRIIA-KGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSAL 175 (477)
Q Consensus 97 ~~~~lv~e~~~gg~L~~~l~~-~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~ 175 (477)
..+|+|||||+|++|.+++.. ...+++..+..++.|++.||.|||++||+||||||+||++ +.++.+||+|||++.
T Consensus 99 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~---~~~~~~kl~Dfg~~~ 175 (327)
T 3lxl_A 99 QSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILV---ESEAHVKIADFGLAK 175 (327)
T ss_dssp CEEEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE---EETTEEEECCGGGCE
T ss_pred ceEEEEEeecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChhhEEE---CCCCCEEEcccccce
Confidence 679999999999999999987 4569999999999999999999999999999999999999 567789999999998
Q ss_pred ccCCCcc----eecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChh---------------hHHH
Q 042823 176 LFEEGQV----YRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKK---------------GTYD 235 (477)
Q Consensus 176 ~~~~~~~----~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~---------------~~~~ 235 (477)
....... .....||+.|+|||++.+ .++.++|||||||++|+|++|..||...... ....
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (327)
T 3lxl_A 176 LLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLE 255 (327)
T ss_dssp ECCTTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHHHH
T ss_pred ecccCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHHHH
Confidence 7643322 123467888999999875 5789999999999999999999998654321 1112
Q ss_pred HHHcCCccCCCCCCCCCCHHHHHHHHHhcccCccccCCHHHHhcC
Q 042823 236 AILQGEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEH 280 (477)
Q Consensus 236 ~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h 280 (477)
.+..+ .. ....+.+++.+.+||.+||+.||.+|||+.+++++
T Consensus 256 ~~~~~-~~--~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~ 297 (327)
T 3lxl_A 256 LLEEG-QR--LPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQ 297 (327)
T ss_dssp HHHTT-CC--CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred Hhhcc-cC--CCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 22222 11 12235789999999999999999999999999754
|
| >3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-44 Score=343.77 Aligned_cols=251 Identities=22% Similarity=0.296 Sum_probs=207.3
Q ss_pred cccccccccccccccCCeEEEEEEEccCC---ceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEE-Ee
Q 042823 20 DVMLHYFFGRMLGRGQFGVSYLCTENSTN---RPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTY-ED 95 (477)
Q Consensus 20 ~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~---~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~-~~ 95 (477)
.-..+|++.+.||+|+||+||+|.+..++ ..+|+|.+... ........+.+|+.+++++ +||||+++++++ ..
T Consensus 22 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~--~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~ 98 (298)
T 3f66_A 22 PSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI--TDIGEVSQFLTEGIIMKDF-SHPNVLSLLGICLRS 98 (298)
T ss_dssp GGGEEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTC--CSHHHHHHHHHHHHHHHTC-CCTTBCCCCEEECCS
T ss_pred ccceehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccC--CCHHHHHHHHHHHHHHHhC-CCCCEeeeeeEEEcC
Confidence 34457999999999999999999975433 35889987643 2334567788999999999 799999999985 55
Q ss_pred CCeEEEEEeccCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCc
Q 042823 96 ETAVHVVMELCEGGDLFDRIIAK-GYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSA 174 (477)
Q Consensus 96 ~~~~~lv~e~~~gg~L~~~l~~~-~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a 174 (477)
++..|+||||++||+|.+++... ..+++..+..++.|++.||.|||++||+||||||+||++ +.++.+||+|||++
T Consensus 99 ~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~ql~~~l~~lH~~~i~H~dikp~Nil~---~~~~~~kl~Dfg~a 175 (298)
T 3f66_A 99 EGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCML---DEKFTVKVADFGLA 175 (298)
T ss_dssp SSCCEEEEECCTTCBHHHHHHCTTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE---CTTCCEEECSCGGG
T ss_pred CCceEEEEeCCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEE---CCCCCEEECccccc
Confidence 67889999999999999999764 458999999999999999999999999999999999999 77889999999999
Q ss_pred cccCCCc-----ceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhh-CCCCCCCCChhhHHHHHHcCCccCCCC
Q 042823 175 LLFEEGQ-----VYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQGEIDFDTD 247 (477)
Q Consensus 175 ~~~~~~~-----~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~t-g~~pf~~~~~~~~~~~i~~~~~~~~~~ 247 (477)
....... ......||+.|+|||++.+ .++.++|||||||++|+|++ |.+||...........+..+.....+
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 254 (298)
T 3f66_A 176 RDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQP- 254 (298)
T ss_dssp CCCSCGGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTTHHHHHHTTCCCCCC-
T ss_pred ccccccchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhcCCCCCCC-
Confidence 7654322 1234567889999999875 68999999999999999999 77788777777777777766543332
Q ss_pred CCCCCCHHHHHHHHHhcccCccccCCHHHHhc
Q 042823 248 PWPSISSTAKDLVRRMLTKDPKRRITAAQVLE 279 (477)
Q Consensus 248 ~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~ 279 (477)
..+++.+.+++.+||+.||.+|||+.++++
T Consensus 255 --~~~~~~l~~li~~~l~~~p~~Rps~~ell~ 284 (298)
T 3f66_A 255 --EYCPDPLYEVMLKCWHPKAEMRPSFSELVS 284 (298)
T ss_dssp --TTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred --ccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 457899999999999999999999999975
|
| >3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7e-45 Score=347.89 Aligned_cols=249 Identities=20% Similarity=0.320 Sum_probs=195.6
Q ss_pred ccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhc-cCCCCeeEEEEEEEe--
Q 042823 19 EDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYL-SGQPNVVEFKSTYED-- 95 (477)
Q Consensus 19 ~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l-~~hpniv~~~~~~~~-- 95 (477)
..+.++|++.+.||+|+||+||+|.+ +++.||+|++... ......+|..++... .+||||+++++++..
T Consensus 4 ~~~~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~------~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~ 75 (301)
T 3q4u_A 4 RTVARDITLLECVGKGRYGEVWRGSW--QGENVAVKIFSSR------DEKSWFRETELYNTVMLRHENILGFIASDMTSR 75 (301)
T ss_dssp CCCGGGCEEEEEEEECSSEEEEEEEE--TTEEEEEEEECGG------GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEE
T ss_pred ccccCcEEEEEeeccCCCcEEEEEEE--CCEEEEEEEeccc------cchhhHHHHHHHHHhhccCcCeeeEEEeecccc
Confidence 45778999999999999999999987 6899999998543 233445566665552 279999999998654
Q ss_pred --CCeEEEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH--------HcCCeeccCCCCceeeeecCCCCC
Q 042823 96 --ETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCH--------SMGVMHRDLKPENFSFISRDDNAL 165 (477)
Q Consensus 96 --~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH--------~~~ivH~dlkp~Nil~~~~~~~~~ 165 (477)
...+|+||||+++|+|.+++. ...+++..+..++.|++.||.||| ++||+||||||+||++ +.++.
T Consensus 76 ~~~~~~~lv~e~~~~g~L~~~l~-~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill---~~~~~ 151 (301)
T 3q4u_A 76 HSSTQLWLITHYHEMGSLYDYLQ-LTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILV---KKNGQ 151 (301)
T ss_dssp TTEEEEEEEECCCTTCBHHHHHT-TCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGGEEE---CTTSC
T ss_pred CCCceeEEehhhccCCCHHHHHh-hcccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHhEEE---cCCCC
Confidence 356899999999999999984 456899999999999999999999 9999999999999999 77889
Q ss_pred EEEeecCCccccCCCcce-----ecccccccccchhhhhh-------hcCCccchHhHHHHHHHHhhC----------CC
Q 042823 166 LKVTDFGSALLFEEGQVY-----RDIVGSGFYIAPEVLRR-------RYGKEIDIWSAGVILYILLSG----------VP 223 (477)
Q Consensus 166 ~kl~Dfg~a~~~~~~~~~-----~~~~gt~~y~aPE~~~~-------~~~~~~DiwslG~il~~l~tg----------~~ 223 (477)
+||+|||++......... ....||+.|+|||++.+ .++.++|||||||++|+|+|| .+
T Consensus 152 ~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~ 231 (301)
T 3q4u_A 152 CCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKP 231 (301)
T ss_dssp EEECCCTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCC
T ss_pred EEEeeCCCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccc
Confidence 999999999765443221 23479999999999865 355789999999999999999 88
Q ss_pred CCCCCCh----hhHHHHHHcCCccCCCCC----CCCCCHHHHHHHHHhcccCccccCCHHHHhc
Q 042823 224 PFWAETK----KGTYDAILQGEIDFDTDP----WPSISSTAKDLVRRMLTKDPKRRITAAQVLE 279 (477)
Q Consensus 224 pf~~~~~----~~~~~~i~~~~~~~~~~~----~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~ 279 (477)
||..... ..............+..+ ...+++.+.+|+.+||+.||++|||+.++++
T Consensus 232 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~ 295 (301)
T 3q4u_A 232 PFYDVVPNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKK 295 (301)
T ss_dssp TTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHH
T ss_pred cccccCCCCcchhhhhHHHhccCCCCCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHH
Confidence 9865432 122222222211111111 0124578999999999999999999999985
|
| >3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-44 Score=349.98 Aligned_cols=263 Identities=17% Similarity=0.178 Sum_probs=208.0
Q ss_pred cccccccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEE
Q 042823 14 LGKAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTY 93 (477)
Q Consensus 14 ~~~~~~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~ 93 (477)
.........++|.+.+.||+|+||.||+|.+ .+++.||+|++...... .....+.+|+.++..+ .||||+++++++
T Consensus 21 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~--~~~~~~~~e~~~l~~l-~h~~iv~~~~~~ 96 (326)
T 3uim_A 21 SLRELQVASDNFSNKNILGRGGFGKVYKGRL-ADGTLVAVKRLKEERTQ--GGELQFQTEVEMISMA-VHRNLLRLRGFC 96 (326)
T ss_dssp CTHHHHTTTTSSCSTTEEECCSSSEEEEECC-SSSCCEEEEECCC-------CCCHHHHHHHGGGTC-CCTTBCCCCEEE
T ss_pred cHHHHHHHhhccccceeEecCCCcEEEEEEe-cCCCEEEEEEeccccCc--hHHHHHHHHHHHHHhc-cCCCccceEEEE
Confidence 3455667788999999999999999999985 46899999998654321 1223578899999888 699999999999
Q ss_pred EeCCeEEEEEeccCCCchHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHc---CCeeccCCCCceeeeecCCCCCE
Q 042823 94 EDETAVHVVMELCEGGDLFDRIIAKG----YNSERDAATVLRAIVNAVNVCHSM---GVMHRDLKPENFSFISRDDNALL 166 (477)
Q Consensus 94 ~~~~~~~lv~e~~~gg~L~~~l~~~~----~~~~~~~~~i~~qil~~L~~lH~~---~ivH~dlkp~Nil~~~~~~~~~~ 166 (477)
.+....++|||||+||+|.+++.... .+++..+..++.|++.||.|||++ ||+||||||+||++ +.++.+
T Consensus 97 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~---~~~~~~ 173 (326)
T 3uim_A 97 MTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILL---DEEFEA 173 (326)
T ss_dssp CCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEE---CTTCCE
T ss_pred ecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEE---CCCCCE
Confidence 99999999999999999999998643 489999999999999999999999 99999999999999 778899
Q ss_pred EEeecCCccccCCC--cceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCC----ChhhHHHHHHc
Q 042823 167 KVTDFGSALLFEEG--QVYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAE----TKKGTYDAILQ 239 (477)
Q Consensus 167 kl~Dfg~a~~~~~~--~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~----~~~~~~~~i~~ 239 (477)
||+|||++...... .......||+.|+|||++.+ .++.++|||||||++|+|++|..||... ...........
T Consensus 174 kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~ 253 (326)
T 3uim_A 174 VVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVK 253 (326)
T ss_dssp EECCCSSCEECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHT
T ss_pred EeccCccccccCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHH
Confidence 99999999876432 22344569999999999864 6899999999999999999999999521 11111111111
Q ss_pred CCccC-----------CCCCCCCCCHHHHHHHHHhcccCccccCCHHHHhcCccc
Q 042823 240 GEIDF-----------DTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWL 283 (477)
Q Consensus 240 ~~~~~-----------~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~ 283 (477)
..... .....+..++.+.+++.+||+.||.+|||+.++++|..-
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~ 308 (326)
T 3uim_A 254 GLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEG 308 (326)
T ss_dssp TTTSSCCSTTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHT
T ss_pred HHhhchhhhhhcChhhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcC
Confidence 11100 000111234779999999999999999999999988653
|
| >2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-44 Score=369.84 Aligned_cols=264 Identities=23% Similarity=0.325 Sum_probs=222.2
Q ss_pred CCCCcCCCCCccccccccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccC
Q 042823 3 CSVSKNQRDPILGKAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSG 82 (477)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~ 82 (477)
|..++++..+.....++...++|++.+.||+|+||.||+|.+.. +..||||++..... ..+.+.+|+.++..+ +
T Consensus 247 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~~----~~~~~~~E~~~l~~l-~ 320 (535)
T 2h8h_A 247 CPTSKPQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNG-TTRVAIKTLKPGTM----SPEAFLQEAQVMKKL-R 320 (535)
T ss_dssp CCCCCCCCSSSSTTCSBCCGGGEEEEEEEEECSSEEEEEEEETT-TEEEEEEEECTTSS----CHHHHHHHHHHHHHC-C
T ss_pred cccccccccccCccceecchhhhhhheecccCCCeEEEEEEECC-CceEEEEEeCCCCC----CHHHHHHHHHHHHhC-C
Confidence 44555555556667788888999999999999999999999864 46799999865432 245788999999999 7
Q ss_pred CCCeeEEEEEEEeCCeEEEEEeccCCCchHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeec
Q 042823 83 QPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIA--KGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISR 160 (477)
Q Consensus 83 hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~--~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~ 160 (477)
||||+++++++.+ ..+|||||||.+|+|.+++.. ...+++.++..++.||+.||.|||++||+||||||+|||+
T Consensus 321 hpniv~~~~~~~~-~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll--- 396 (535)
T 2h8h_A 321 HEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILV--- 396 (535)
T ss_dssp CTTBCCEEEEECS-SSCEEEECCCTTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE---
T ss_pred CCCEeeEEEEEee-ccceEeeehhcCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEE---
Confidence 9999999999876 678999999999999999975 3568999999999999999999999999999999999999
Q ss_pred CCCCCEEEeecCCccccCCCcc--eecccccccccchhhhh-hhcCCccchHhHHHHHHHHhh-CCCCCCCCChhhHHHH
Q 042823 161 DDNALLKVTDFGSALLFEEGQV--YRDIVGSGFYIAPEVLR-RRYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDA 236 (477)
Q Consensus 161 ~~~~~~kl~Dfg~a~~~~~~~~--~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~l~t-g~~pf~~~~~~~~~~~ 236 (477)
+.++.+||+|||++........ .....++..|+|||++. +.++.++|||||||++|+|++ |..||.+....+....
T Consensus 397 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~~~~~~ 476 (535)
T 2h8h_A 397 GENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQ 476 (535)
T ss_dssp CGGGCEEECCTTSTTTCCCHHHHTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHHHHHHH
T ss_pred cCCCcEEEcccccceecCCCceecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH
Confidence 6778899999999986643221 12345678899999986 468999999999999999999 9999998888888777
Q ss_pred HHcCCccCCCCCCCCCCHHHHHHHHHhcccCccccCCHHHHhc
Q 042823 237 ILQGEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLE 279 (477)
Q Consensus 237 i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~ 279 (477)
+..+.. . ...+.+++.+.+||.+||+.||++|||+.++++
T Consensus 477 i~~~~~-~--~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~ 516 (535)
T 2h8h_A 477 VERGYR-M--PCPPECPESLHDLMCQCWRKEPEERPTFEYLQA 516 (535)
T ss_dssp HHTTCC-C--CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHcCCC-C--CCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence 766532 1 122468999999999999999999999999986
|
| >2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-44 Score=346.68 Aligned_cols=251 Identities=24% Similarity=0.310 Sum_probs=204.6
Q ss_pred cccccccccccCCeEEEEEEEccCCceEEEEEeecCCc-cchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 042823 24 HYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPK-MRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVV 102 (477)
Q Consensus 24 ~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~lv 102 (477)
.|..++.||+|+||.||+|.+ +++.||+|++..... ........+.+|+.++..+ +||||+++++++.+.+..|+|
T Consensus 32 ~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv 108 (307)
T 2nru_A 32 ISVGGNKMGEGGFGVVYKGYV--NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKC-QHENLVELLGFSSDGDDLCLV 108 (307)
T ss_dssp TTTTCCEEEECSSEEEEEEES--SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHC-CCTTBCCEEEEECSSSSCEEE
T ss_pred ccccCCccccCCCeEEEEEEE--CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhc-CCCCeEEEEEEEecCCceEEE
Confidence 466679999999999999986 688999999865432 2233456788999999999 799999999999999999999
Q ss_pred EeccCCCchHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCC
Q 042823 103 MELCEGGDLFDRIIA---KGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEE 179 (477)
Q Consensus 103 ~e~~~gg~L~~~l~~---~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~ 179 (477)
|||++||+|.+++.. ...+++..+..++.|++.||.|||++||+||||||+||++ +.++.+||+|||++.....
T Consensus 109 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nili---~~~~~~kl~Dfg~~~~~~~ 185 (307)
T 2nru_A 109 YVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILL---DEAFTAKISDFGLARASEK 185 (307)
T ss_dssp EECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEE---CTTCCEEECCCTTCEECCS
T ss_pred EEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEE---cCCCcEEEeeccccccccc
Confidence 999999999999874 3468999999999999999999999999999999999999 7788999999999876543
Q ss_pred Cc---ceecccccccccchhhhhhhcCCccchHhHHHHHHHHhhCCCCCCCCChhhHH----HHHHcCCccC-------C
Q 042823 180 GQ---VYRDIVGSGFYIAPEVLRRRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTY----DAILQGEIDF-------D 245 (477)
Q Consensus 180 ~~---~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~----~~i~~~~~~~-------~ 245 (477)
.. ......||+.|+|||++.+.++.++|||||||++|+|++|.+||......... ..+......+ .
T Consensus 186 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (307)
T 2nru_A 186 FAQTVMTSRIVGTTAYMAPEALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKM 265 (307)
T ss_dssp CSSCEECSSCCSCGGGCCHHHHTTEECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBTTHHHHHHHTTSCCHHHHSCSSC
T ss_pred ccccccccccCCCcCcCChHHhcCCCCccchhHHHHHHHHHHHHCCCCcccCcchHHHHHHHHHhhhhhhhhhhhccccc
Confidence 22 12345799999999999988999999999999999999999999765443222 2222211100 0
Q ss_pred CCCCCCCCHHHHHHHHHhcccCccccCCHHHHhcC
Q 042823 246 TDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEH 280 (477)
Q Consensus 246 ~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h 280 (477)
....+..++.+.+++.+||+.||.+|||+.+++++
T Consensus 266 ~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~ 300 (307)
T 2nru_A 266 NDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQL 300 (307)
T ss_dssp SCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHH
T ss_pred cccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 11112345778999999999999999999999864
|
| >3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=7.5e-44 Score=340.22 Aligned_cols=247 Identities=23% Similarity=0.304 Sum_probs=204.8
Q ss_pred cccccccccccCCeEEEEEEEccCCc---eEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeE-
Q 042823 24 HYFFGRMLGRGQFGVSYLCTENSTNR---PYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAV- 99 (477)
Q Consensus 24 ~Y~~~~~iG~G~~g~V~~~~~~~~~~---~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~- 99 (477)
.|.+.+.||+|+||+||+|.+..+++ .||+|++.... .......+.+|+.++..+ +||||+++++++.+.+..
T Consensus 22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~ 98 (298)
T 3pls_A 22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRIT--EMQQVEAFLREGLLMRGL-NHPNVLALIGIMLPPEGLP 98 (298)
T ss_dssp EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCC--SHHHHHHHHHHHHHHHTC-CCTTBCCCCEEECCSSSCC
T ss_pred EEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccc--cHHHHHHHHHHHHHHHhC-CCCCeeeEEEEEecCCCCc
Confidence 56677999999999999999765554 79999886432 334567788999999999 799999999999876655
Q ss_pred EEEEeccCCCchHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccC
Q 042823 100 HVVMELCEGGDLFDRIIA-KGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFE 178 (477)
Q Consensus 100 ~lv~e~~~gg~L~~~l~~-~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~ 178 (477)
++||||+.+|+|.+++.. ...+++..+..++.|++.||.|||++||+||||||+||++ +.++.+||+|||++....
T Consensus 99 ~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nili---~~~~~~kl~Dfg~~~~~~ 175 (298)
T 3pls_A 99 HVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQKFVHRDLAARNCML---DESFTVKVADFGLARDIL 175 (298)
T ss_dssp EEEECCCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE---CTTCCEEECCTTSSCTTT
T ss_pred EEEEecccCCCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEE---cCCCcEEeCcCCCccccc
Confidence 999999999999999987 4568999999999999999999999999999999999999 778899999999997653
Q ss_pred CCc-----ceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhh-CCCCCCCCChhhHHHHHHcCCccCCCCCCCC
Q 042823 179 EGQ-----VYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQGEIDFDTDPWPS 251 (477)
Q Consensus 179 ~~~-----~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~t-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 251 (477)
... ......+|+.|+|||++.+ .++.++|||||||++|+|++ |.+||...........+..+.... ....
T Consensus 176 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~---~~~~ 252 (298)
T 3pls_A 176 DREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLAQGRRLP---QPEY 252 (298)
T ss_dssp TGGGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCGGGHHHHHHTTCCCC---CCTT
T ss_pred CCcccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCHHHHHHHhhcCCCCC---CCcc
Confidence 321 2234567899999999875 58999999999999999999 555566666666666665554221 2246
Q ss_pred CCHHHHHHHHHhcccCccccCCHHHHhc
Q 042823 252 ISSTAKDLVRRMLTKDPKRRITAAQVLE 279 (477)
Q Consensus 252 ~~~~~~~li~~~l~~dp~~R~s~~~~l~ 279 (477)
+++.+.+++.+||+.||.+|||+.++++
T Consensus 253 ~~~~l~~li~~~l~~~p~~Rps~~~ll~ 280 (298)
T 3pls_A 253 CPDSLYQVMQQCWEADPAVRPTFRVLVG 280 (298)
T ss_dssp CCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred chHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 7899999999999999999999999875
|
| >3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.6e-46 Score=383.51 Aligned_cols=262 Identities=26% Similarity=0.381 Sum_probs=210.5
Q ss_pred ccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEe-----
Q 042823 21 VMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYED----- 95 (477)
Q Consensus 21 ~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~----- 95 (477)
..++|++.+.||+|+||.||+|.+..+|+.||+|++... ........+.+|+.++..+ +||||+++++++..
T Consensus 12 ~~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~--~~~~~~~~~~~Ei~iL~~L-~HpnIV~l~~v~~~~~~~~ 88 (676)
T 3qa8_A 12 TCGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQE--LSPKNRERWCLEIQIMKKL-NHPNVVSAREVPDGLQKLA 88 (676)
T ss_dssp -----CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSC--CCHHHHHHHHHHHHHHHHC-CBTTBCCEEECCTTTCCCC
T ss_pred CCCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEeccc--CCHHHHHHHHHHHHHHHhC-CCCCCCceeeeeccccccc
Confidence 347899999999999999999999999999999988653 2344567788999999999 79999999999765
Q ss_pred -CCeEEEEEeccCCCchHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeec
Q 042823 96 -ETAVHVVMELCEGGDLFDRIIAKG---YNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDF 171 (477)
Q Consensus 96 -~~~~~lv~e~~~gg~L~~~l~~~~---~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Df 171 (477)
.+..|+|||||+||+|.+++.... .+++..++.++.|++.||.|||++||+||||||+||++...+....+||+||
T Consensus 89 ~~~~~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~gIVHrDLKP~NILl~~~g~~~~vKL~DF 168 (676)
T 3qa8_A 89 PNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDL 168 (676)
T ss_dssp TTSSCCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHTTBCCCCCCSTTEEEECCSSSCEEEECSC
T ss_pred CCCeEEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEeecCCCceeEEEccc
Confidence 677899999999999999998754 5899999999999999999999999999999999999965445556999999
Q ss_pred CCccccCCCcceecccccccccchhhhh-hhcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHH--------------H
Q 042823 172 GSALLFEEGQVYRDIVGSGFYIAPEVLR-RRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYD--------------A 236 (477)
Q Consensus 172 g~a~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~--------------~ 236 (477)
|++.............||+.|+|||++. ..++.++|||||||++|+|++|..||.+......+. .
T Consensus 169 G~a~~~~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~ 248 (676)
T 3qa8_A 169 GYAKELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHIVVYD 248 (676)
T ss_dssp CCCCBTTSCCCCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHHHHSSTTCC------CCSCC
T ss_pred ccccccccccccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccchhhhhhhhhcccchhhhhhh
Confidence 9998876666556678999999999987 468999999999999999999999997643221110 0
Q ss_pred HHcCCccCC------CCCCCCCCHHHHHHHHHhcccCccccCCHHHHhcCcccCc
Q 042823 237 ILQGEIDFD------TDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRE 285 (477)
Q Consensus 237 i~~~~~~~~------~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~ 285 (477)
...+...+. ....+.+++.+.+||.+||..||++|||+.++++||||+.
T Consensus 249 ~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL~hp~F~~ 303 (676)
T 3qa8_A 249 DLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQA 303 (676)
T ss_dssp CCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCCCCTTHHH
T ss_pred hhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHhcCHHHHH
Confidence 011111111 1112236789999999999999999999999999999864
|
| >3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-44 Score=346.14 Aligned_cols=251 Identities=24% Similarity=0.304 Sum_probs=203.6
Q ss_pred cccccc-cccccccccCCeEEEEEEE----ccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEE
Q 042823 20 DVMLHY-FFGRMLGRGQFGVSYLCTE----NSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYE 94 (477)
Q Consensus 20 ~~~~~Y-~~~~~iG~G~~g~V~~~~~----~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~ 94 (477)
.+.++| ++++.||+|+||+||+|.+ ..+++.||+|++.... .......+.+|+.++..+ +||||+++++++.
T Consensus 27 ~~~~r~~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~ 103 (318)
T 3lxp_A 27 VFHKRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADA--GPQHRSGWKQEIDILRTL-YHEHIIKYKGCCE 103 (318)
T ss_dssp BCCGGGEEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTC--CHHHHHHHHHHHHHHHHC-CCTTBCCEEEEEE
T ss_pred eecHHHHhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEecccc--ChHHHHHHHHHHHHHHhC-CCcchhhEEEEEe
Confidence 466676 9999999999999988754 4578999999987542 334567789999999999 6999999999998
Q ss_pred e--CCeEEEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecC
Q 042823 95 D--ETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFG 172 (477)
Q Consensus 95 ~--~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg 172 (477)
+ ...+|+|||||++|+|.+++.... +++..+..++.||+.||.|||++||+||||||+||++ +.++.+||+|||
T Consensus 104 ~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~i~~~l~~~l~~LH~~~ivH~Dikp~Nil~---~~~~~~kl~Dfg 179 (318)
T 3lxp_A 104 DAGAASLQLVMEYVPLGSLRDYLPRHS-IGLAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLL---DNDRLVKIGDFG 179 (318)
T ss_dssp ETTTTEEEEEECCCTTCBHHHHGGGSC-CCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE---CTTCCEEECCGG
T ss_pred cCCCceEEEEEecccCCcHHHHHhhCC-CCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEE---cCCCCEEECCcc
Confidence 7 468999999999999999886654 8999999999999999999999999999999999999 778899999999
Q ss_pred CccccCCCcc----eecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChhh--------------H
Q 042823 173 SALLFEEGQV----YRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKG--------------T 233 (477)
Q Consensus 173 ~a~~~~~~~~----~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~--------------~ 233 (477)
++........ .....||+.|+|||++.+ .++.++|||||||++|+|+||..||....... .
T Consensus 180 ~a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 259 (318)
T 3lxp_A 180 LAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLR 259 (318)
T ss_dssp GCEECCTTCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHH
T ss_pred ccccccccccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHH
Confidence 9987654332 234567888999999875 68899999999999999999999996532210 1
Q ss_pred HHHHHcCCccCCCCCCCCCCHHHHHHHHHhcccCccccCCHHHHhc
Q 042823 234 YDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLE 279 (477)
Q Consensus 234 ~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~ 279 (477)
.......... ......+++.+.+||.+||+.||.+|||+.++++
T Consensus 260 ~~~~~~~~~~--~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~ 303 (318)
T 3lxp_A 260 LTELLERGER--LPRPDKCPAEVYHLMKNCWETEASFRPTFENLIP 303 (318)
T ss_dssp HHHHHHTTCC--CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHHhcccC--CCCCccccHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence 1111122111 1223568999999999999999999999999974
|
| >3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-44 Score=354.53 Aligned_cols=249 Identities=22% Similarity=0.294 Sum_probs=199.5
Q ss_pred ccccccccccccCCeEEEEEEEccCC---ceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEE-eCCe
Q 042823 23 LHYFFGRMLGRGQFGVSYLCTENSTN---RPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYE-DETA 98 (477)
Q Consensus 23 ~~Y~~~~~iG~G~~g~V~~~~~~~~~---~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~-~~~~ 98 (477)
..|.+.+.||+|+||.||+|.+..++ ..||+|.+.... .......+.+|+.++.++ +||||+++++++. .++.
T Consensus 89 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~il~~l-~hpnIv~~~~~~~~~~~~ 165 (373)
T 3c1x_A 89 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRIT--DIGEVSQFLTEGIIMKDF-SHPNVLSLLGICLRSEGS 165 (373)
T ss_dssp EEEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCS--CSHHHHHHHHHHTTSTTC-CCTTBCCCCEEECCCSSC
T ss_pred ceeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCC--CHHHHHHHHHHHHHHHhC-CCCCcceEEEEEEcCCCC
Confidence 35888999999999999999876443 468999875432 234567788999999999 7999999999864 5568
Q ss_pred EEEEEeccCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCcccc
Q 042823 99 VHVVMELCEGGDLFDRIIAK-GYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLF 177 (477)
Q Consensus 99 ~~lv~e~~~gg~L~~~l~~~-~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~ 177 (477)
.|+||||++||+|.+++... ..+++..+..++.||+.||.|||++||+||||||+||++ +.++.+||+|||++...
T Consensus 166 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll---~~~~~~kL~DFG~a~~~ 242 (373)
T 3c1x_A 166 PLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCML---DEKFTVKVADFGLARDM 242 (373)
T ss_dssp CEEEEECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE---CTTCCEEECCC------
T ss_pred eEEEEECCCCCCHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCCEecCccchheEEE---CCCCCEEEeeccccccc
Confidence 89999999999999999865 458899999999999999999999999999999999999 77889999999999765
Q ss_pred CCCc-----ceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhh-CCCCCCCCChhhHHHHHHcCCccCCCCCCC
Q 042823 178 EEGQ-----VYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQGEIDFDTDPWP 250 (477)
Q Consensus 178 ~~~~-----~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~t-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~ 250 (477)
.... ......+|+.|+|||++.+ .++.++|||||||++|+|+| |.+||...+..+....+..+..... .+
T Consensus 243 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~~~~~~~~~~~~~~---p~ 319 (373)
T 3c1x_A 243 YDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQ---PE 319 (373)
T ss_dssp ---------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSCHHHHHHTTCCCCC---CT
T ss_pred cccccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHHHHHHHHcCCCCCC---CC
Confidence 3322 1123467888999999865 68999999999999999999 7888888777777777766653322 24
Q ss_pred CCCHHHHHHHHHhcccCccccCCHHHHhcC
Q 042823 251 SISSTAKDLVRRMLTKDPKRRITAAQVLEH 280 (477)
Q Consensus 251 ~~~~~~~~li~~~l~~dp~~R~s~~~~l~h 280 (477)
.+++.+.+++.+||+.||++|||+.+++++
T Consensus 320 ~~~~~l~~li~~cl~~dp~~RPs~~ell~~ 349 (373)
T 3c1x_A 320 YCPDPLYEVMLKCWHPKAEMRPSFSELVSR 349 (373)
T ss_dssp TCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred CCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 689999999999999999999999999863
|
| >2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.4e-45 Score=354.93 Aligned_cols=245 Identities=16% Similarity=0.155 Sum_probs=199.4
Q ss_pred cccccccccccccCCeEEEEEEEccC--------CceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeE-----
Q 042823 22 MLHYFFGRMLGRGQFGVSYLCTENST--------NRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVE----- 88 (477)
Q Consensus 22 ~~~Y~~~~~iG~G~~g~V~~~~~~~~--------~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~----- 88 (477)
.++|++.+.||+|+||.||+|.+..+ ++.||+|++... ..+.+|+.++..+ .||||++
T Consensus 41 ~~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~--------~~~~~E~~~l~~l-~h~niv~~~~~~ 111 (352)
T 2jii_A 41 GRQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD--------GRLFNEQNFFQRA-AKPLQVNKWKKL 111 (352)
T ss_dssp SCEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT--------STHHHHHHHHHHH-CCHHHHHHHHHH
T ss_pred CCeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc--------chHHHHHHHHHHh-cccchhhhhhhh
Confidence 47899999999999999999999874 889999998654 2467899999998 6988887
Q ss_pred ----------EEEEEEe-CCeEEEEEeccCCCchHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCce
Q 042823 89 ----------FKSTYED-ETAVHVVMELCEGGDLFDRIIAK--GYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENF 155 (477)
Q Consensus 89 ----------~~~~~~~-~~~~~lv~e~~~gg~L~~~l~~~--~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Ni 155 (477)
+++++.. +..+|+||||| |++|.+++... ..+++..+..++.||+.||.|||++||+||||||+||
T Consensus 112 ~~~~~~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NI 190 (352)
T 2jii_A 112 YSTPLLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHENEYVHGNVTAENI 190 (352)
T ss_dssp TTCTTCSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCGGGE
T ss_pred ccCCccCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHE
Confidence 6777776 78899999999 99999999886 7899999999999999999999999999999999999
Q ss_pred eeeecCCCC--CEEEeecCCccccCCCc--------ceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCC
Q 042823 156 SFISRDDNA--LLKVTDFGSALLFEEGQ--------VYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPP 224 (477)
Q Consensus 156 l~~~~~~~~--~~kl~Dfg~a~~~~~~~--------~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~p 224 (477)
++ +.++ .+||+|||++....... ......||+.|+|||++.+ .++.++|||||||++|+|++|..|
T Consensus 191 l~---~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p 267 (352)
T 2jii_A 191 FV---DPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLP 267 (352)
T ss_dssp EE---ETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCT
T ss_pred EE---cCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCC
Confidence 99 4555 89999999997654322 1133479999999999876 689999999999999999999999
Q ss_pred CCCCC-hhhHHHHHH----cCCccC--CCCCCCCCCHHHHHHHHHhcccCccccCCHHHHhc
Q 042823 225 FWAET-KKGTYDAIL----QGEIDF--DTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLE 279 (477)
Q Consensus 225 f~~~~-~~~~~~~i~----~~~~~~--~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~ 279 (477)
|.... ......... .....+ ....+..+++.+.+||.+||..||++|||+.++++
T Consensus 268 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~ 329 (352)
T 2jii_A 268 WTNCLPNTEDIMKQKQKFVDKPGPFVGPCGHWIRPSETLQKYLKVVMALTYEEKPPYAMLRN 329 (352)
T ss_dssp TGGGTTCHHHHHHHHHHHHHSCCCEECTTSCEECCCHHHHHHHHHHHTCCTTCCCCHHHHHH
T ss_pred cccCCcCHHHHHHHHHhccCChhhhhhhccccCCCcHHHHHHHHHHHhCChhhCCCHHHHHH
Confidence 98754 222222221 111111 11223467999999999999999999999999975
|
| >3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-44 Score=352.69 Aligned_cols=250 Identities=17% Similarity=0.202 Sum_probs=198.0
Q ss_pred cccccccccccccccccCCeEEEEE-----EEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhcc--CCCCeeEEE
Q 042823 18 YEDVMLHYFFGRMLGRGQFGVSYLC-----TENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLS--GQPNVVEFK 90 (477)
Q Consensus 18 ~~~~~~~Y~~~~~iG~G~~g~V~~~-----~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~--~hpniv~~~ 90 (477)
.+.-.++|.+.+.||+|+||+||+| .+..+++.||+|++... ....+.+|++++..+. .||||++++
T Consensus 60 ~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~------~~~~~~~e~~~~~~l~~~~~~~iv~~~ 133 (365)
T 3e7e_A 60 FQLGSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA------NPWEFYIGTQLMERLKPSMQHMFMKFY 133 (365)
T ss_dssp EECSSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC------CHHHHHHHHHHHHHSCGGGGGGBCCEE
T ss_pred EEECCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC------ChhHHHHHHHHHHHhhhhhhhhhhhhh
Confidence 3344578999999999999999999 46778999999998643 2345677888777773 289999999
Q ss_pred EEEEeCCeEEEEEeccCCCchHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeee------
Q 042823 91 STYEDETAVHVVMELCEGGDLFDRIIA-----KGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFIS------ 159 (477)
Q Consensus 91 ~~~~~~~~~~lv~e~~~gg~L~~~l~~-----~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~------ 159 (477)
+++...+..|+|||||+||+|.+++.. ...+++..+..++.||+.||.|||++||+||||||+|||+..
T Consensus 134 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~ivHrDiKp~NIll~~~~~~~~ 213 (365)
T 3e7e_A 134 SAHLFQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCEIIHGDIKPDNFILGNGFLEQD 213 (365)
T ss_dssp EEEECSSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECGGGTCC-
T ss_pred eeeecCCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEecccccCcc
Confidence 999999999999999999999999974 456999999999999999999999999999999999999932
Q ss_pred --cCCCCCEEEeecCCccccC---CCcceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChhhH
Q 042823 160 --RDDNALLKVTDFGSALLFE---EGQVYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKGT 233 (477)
Q Consensus 160 --~~~~~~~kl~Dfg~a~~~~---~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~ 233 (477)
....+.+||+|||+|.... ........+||+.|+|||++.+ .|+.++|||||||++|+|+||..||........
T Consensus 214 ~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~ 293 (365)
T 3e7e_A 214 DEDDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGEC 293 (365)
T ss_dssp -----CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTEE
T ss_pred ccccccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCCce
Confidence 1127899999999996542 3344556789999999999875 589999999999999999999999965432110
Q ss_pred HHHHHcCCccCCCCCCCCCCHHHHHHHHHhcccCccccCCHHHHhcCc
Q 042823 234 YDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHP 281 (477)
Q Consensus 234 ~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~ 281 (477)
. ....+.. ...++.+.+++..||+.+|.+|++..+.+.+.
T Consensus 294 ~-----~~~~~~~---~~~~~~~~~~~~~~l~~~p~~r~~~~~~l~~~ 333 (365)
T 3e7e_A 294 K-----PEGLFRR---LPHLDMWNEFFHVMLNIPDCHHLPSLDLLRQK 333 (365)
T ss_dssp E-----ECSCCTT---CSSHHHHHHHHHHHHCCCCTTCCCCHHHHHHH
T ss_pred e-----echhccc---cCcHHHHHHHHHHHcCCCCCCcchHHHHHHHH
Confidence 0 0001111 13477899999999999999997665555543
|
| >4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-43 Score=370.30 Aligned_cols=242 Identities=20% Similarity=0.246 Sum_probs=204.3
Q ss_pred ccccccCCeEEEEEEE--ccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEecc
Q 042823 29 RMLGRGQFGVSYLCTE--NSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVVMELC 106 (477)
Q Consensus 29 ~~iG~G~~g~V~~~~~--~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~lv~e~~ 106 (477)
+.||+|+||.||+|.+ +.+++.||||++.... ........+.+|+.++..+ +|||||++++++.. ..+++|||||
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~-~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~-~~~~lv~E~~ 451 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEA-NDPALKDELLAEANVMQQL-DNPYIVRMIGICEA-ESWMLVMEMA 451 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGG-GCGGGHHHHHHHHHHHHHC-CCTTBCCEEEEEES-SSEEEEEECC
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEecccc-CCHHHHHHHHHHHHHHHhC-CCCCEeeEEEEEec-CCEEEEEEcc
Confidence 4799999999999955 4567899999986542 2334467889999999999 79999999999975 4588999999
Q ss_pred CCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCCCcc----
Q 042823 107 EGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQV---- 182 (477)
Q Consensus 107 ~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~---- 182 (477)
+||+|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++........
T Consensus 452 ~~g~L~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDLkp~NILl---~~~~~~kL~DFGla~~~~~~~~~~~~ 528 (635)
T 4fl3_A 452 ELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLL---VTQHYAKISDFGLSKALRADENYYKA 528 (635)
T ss_dssp TTEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE---EETTEEEECCTTHHHHTTC-------
T ss_pred CCCCHHHHHhhCCCCCHHHHHHHHHHHHHHHHHHHHCCEeCCCCChHhEEE---eCCCCEEEEEcCCccccccCcccccc
Confidence 999999999998899999999999999999999999999999999999999 5677899999999987643321
Q ss_pred eecccccccccchhhhhh-hcCCccchHhHHHHHHHHhh-CCCCCCCCChhhHHHHHHcCCccCCCCCCCCCCHHHHHHH
Q 042823 183 YRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLV 260 (477)
Q Consensus 183 ~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~t-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li 260 (477)
.....+|+.|+|||++.+ .++.++|||||||++|+|++ |..||.+....+....+..+.... ....+|+++.+||
T Consensus 529 ~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~~~~~~~---~p~~~~~~l~~li 605 (635)
T 4fl3_A 529 QTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMG---CPAGCPREMYDLM 605 (635)
T ss_dssp ------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCC---CCTTCCHHHHHHH
T ss_pred ccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCC---CCCCCCHHHHHHH
Confidence 123356788999999975 68999999999999999998 999999988888888777764322 2246899999999
Q ss_pred HHhcccCccccCCHHHHhc
Q 042823 261 RRMLTKDPKRRITAAQVLE 279 (477)
Q Consensus 261 ~~~l~~dp~~R~s~~~~l~ 279 (477)
.+||+.||++|||+.++++
T Consensus 606 ~~cl~~dP~~RPs~~~l~~ 624 (635)
T 4fl3_A 606 NLCWTYDVENRPGFAAVEL 624 (635)
T ss_dssp HHHTCSSTTTSCCHHHHHH
T ss_pred HHHcCCCHhHCcCHHHHHH
Confidence 9999999999999999874
|
| >3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.5e-44 Score=360.04 Aligned_cols=254 Identities=21% Similarity=0.245 Sum_probs=209.5
Q ss_pred cccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeE
Q 042823 20 DVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAV 99 (477)
Q Consensus 20 ~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~ 99 (477)
.+.++|++++.||+|+||.||+|.+..+++.||||++...... ..+.+|+.++..+.+|++|+.+..++......
T Consensus 4 ~i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~-----~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~ 78 (483)
T 3sv0_A 4 RVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH-----PQLLYESKIYRILQGGTGIPNVRWFGVEGDYN 78 (483)
T ss_dssp EETTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCSS-----CCHHHHHHHHHHTTTSTTCCCEEEEEEETTEE
T ss_pred CcCCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEecccccc-----HHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEE
Confidence 4668999999999999999999999999999999988654332 23678999999997778888888888899999
Q ss_pred EEEEeccCCCchHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccC
Q 042823 100 HVVMELCEGGDLFDRIIA-KGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFE 178 (477)
Q Consensus 100 ~lv~e~~~gg~L~~~l~~-~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~ 178 (477)
||||||| |++|.+++.. ...+++..++.++.||+.||.|||++||+||||||+|||+...+..+.+||+|||++....
T Consensus 79 ~lvme~~-g~sL~~ll~~~~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~ 157 (483)
T 3sv0_A 79 VLVMDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYR 157 (483)
T ss_dssp EEEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCGGGTTCEEECCCTTCEECB
T ss_pred EEEEECC-CCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCcceEEEecCCCCCeEEEEeCCcceecc
Confidence 9999999 8899999986 5679999999999999999999999999999999999999554567899999999998764
Q ss_pred CCcc--------eecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChh---hHHHHHHcCCccCCC
Q 042823 179 EGQV--------YRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKK---GTYDAILQGEIDFDT 246 (477)
Q Consensus 179 ~~~~--------~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~---~~~~~i~~~~~~~~~ 246 (477)
.... .....||+.|+|||++.+ .++.++|||||||++|+|++|..||.+.... ..+..+.........
T Consensus 158 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~ 237 (483)
T 3sv0_A 158 DTSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVATSI 237 (483)
T ss_dssp CTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHHHHHHHSCH
T ss_pred CCccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHhhccccccH
Confidence 4322 125679999999999875 5899999999999999999999999875442 223333222211110
Q ss_pred -CCCCCCCHHHHHHHHHhcccCccccCCHHHHhc
Q 042823 247 -DPWPSISSTAKDLVRRMLTKDPKRRITAAQVLE 279 (477)
Q Consensus 247 -~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~ 279 (477)
.....+++++.+||..||+.+|++||++.++++
T Consensus 238 ~~l~~~~p~~l~~li~~cl~~dP~~RPs~~el~~ 271 (483)
T 3sv0_A 238 EALCRGYPTEFASYFHYCRSLRFDDKPDYSYLKR 271 (483)
T ss_dssp HHHHTTSCHHHHHHHHHHHTCCTTCCCCHHHHHH
T ss_pred HHHhcCCcHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence 111367899999999999999999999998765
|
| >2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.7e-44 Score=341.33 Aligned_cols=240 Identities=26% Similarity=0.403 Sum_probs=193.4
Q ss_pred cccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEE
Q 042823 22 MLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHV 101 (477)
Q Consensus 22 ~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~l 101 (477)
.++|++.+.||+|+||.||+|.+ .++.||+|++... .....+.+|+.++.++ +||||+++++++.+ ..|+
T Consensus 7 ~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~-----~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~--~~~l 76 (307)
T 2eva_A 7 YKEIEVEEVVGRGAFGVVCKAKW--RAKDVAIKQIESE-----SERKAFIVELRQLSRV-NHPNIVKLYGACLN--PVCL 76 (307)
T ss_dssp GGGEEEEEEEECCSSSEEEEEEE--TTEEEEEEECSST-----THHHHHHHHHHHHHHC-CCTTBCCEEEBCTT--TTEE
T ss_pred HhHeeeeeEeecCCCceEEEEEE--CCeeEEEEEecCh-----hHHHHHHHHHHHHhcC-CCCCcCeEEEEEcC--CcEE
Confidence 35899999999999999999987 4788999998532 2456788999999999 79999999998874 4789
Q ss_pred EEeccCCCchHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHH---cCCeeccCCCCceeeeecCCCCC-EEEeecCCc
Q 042823 102 VMELCEGGDLFDRIIAKG---YNSERDAATVLRAIVNAVNVCHS---MGVMHRDLKPENFSFISRDDNAL-LKVTDFGSA 174 (477)
Q Consensus 102 v~e~~~gg~L~~~l~~~~---~~~~~~~~~i~~qil~~L~~lH~---~~ivH~dlkp~Nil~~~~~~~~~-~kl~Dfg~a 174 (477)
||||++||+|.+++.... .++...+..++.|++.||.|||+ +||+||||||+||++ +.++. +||+|||++
T Consensus 77 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll---~~~~~~~kl~Dfg~~ 153 (307)
T 2eva_A 77 VMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLL---VAGGTVLKICDFGTA 153 (307)
T ss_dssp EEECCTTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEE---ETTTTEEEECCCCC-
T ss_pred EEEcCCCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEE---eCCCCEEEEcccccc
Confidence 999999999999998765 36889999999999999999999 899999999999998 44554 899999999
Q ss_pred cccCCCcceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChh--hHHHHHHcCCccCCCCCCCC
Q 042823 175 LLFEEGQVYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKK--GTYDAILQGEIDFDTDPWPS 251 (477)
Q Consensus 175 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~--~~~~~i~~~~~~~~~~~~~~ 251 (477)
...... .....||+.|+|||++.+ .++.++|||||||++|+|++|..||...... .....+..+.. ....+.
T Consensus 154 ~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~---~~~~~~ 228 (307)
T 2eva_A 154 CDIQTH--MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTR---PPLIKN 228 (307)
T ss_dssp -------------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHHHHHHHHTTCC---CCCBTT
T ss_pred cccccc--cccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHHHHHHHHhcCCC---CCcccc
Confidence 765432 234569999999999875 6899999999999999999999999764332 22233333321 223357
Q ss_pred CCHHHHHHHHHhcccCccccCCHHHHhc
Q 042823 252 ISSTAKDLVRRMLTKDPKRRITAAQVLE 279 (477)
Q Consensus 252 ~~~~~~~li~~~l~~dp~~R~s~~~~l~ 279 (477)
+|+.+.++|.+||+.||.+|||+.++++
T Consensus 229 ~~~~l~~li~~~l~~dp~~Rps~~ell~ 256 (307)
T 2eva_A 229 LPKPIESLMTRCWSKDPSQRPSMEEIVK 256 (307)
T ss_dssp CCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred cCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence 8999999999999999999999999986
|
| >2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-44 Score=346.64 Aligned_cols=256 Identities=20% Similarity=0.300 Sum_probs=210.9
Q ss_pred ccccccccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEE
Q 042823 13 ILGKAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKST 92 (477)
Q Consensus 13 ~~~~~~~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~ 92 (477)
...+.++...++|++.+.||+|+||.||+|.+.. .+|+|++...... ......+.+|+.++..+ +||||++++++
T Consensus 23 ~~~~~~~i~~~~~~~~~~lg~G~~g~V~~~~~~~---~~avk~~~~~~~~-~~~~~~~~~e~~~l~~l-~h~~iv~~~~~ 97 (319)
T 2y4i_B 23 IFLQEWDIPFEQLEIGELIGKGRFGQVYHGRWHG---EVAIRLIDIERDN-EDQLKAFKREVMAYRQT-RHENVVLFMGA 97 (319)
T ss_dssp CCGGGSSSCCSCEECCCBCCCSSSSEEEEEEESS---SEEEEECCCCSCC-CCCCCCCCTTGGGGTTC-CCTTBCCCCEE
T ss_pred cccccccCCHHHeEEeeEeccCCceEEEEEEEcC---eEEEEEeecCCCC-HHHHHHHHHHHHHHhcC-CCCCEeEEEEE
Confidence 4456777778999999999999999999998753 5999998654321 12234466788888888 79999999999
Q ss_pred EEeCCeEEEEEeccCCCchHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeec
Q 042823 93 YEDETAVHVVMELCEGGDLFDRIIAKG-YNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDF 171 (477)
Q Consensus 93 ~~~~~~~~lv~e~~~gg~L~~~l~~~~-~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Df 171 (477)
+.+...+++||||++|++|.+++...+ .+++..+..++.||+.||.|||++|++||||||+||++ + ++.+||+||
T Consensus 98 ~~~~~~~~iv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~NIl~---~-~~~~~l~Df 173 (319)
T 2y4i_B 98 CMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAKGILHKDLKSKNVFY---D-NGKVVITDF 173 (319)
T ss_dssp EECSSCEEEECBCCCSEEHHHHTTSSCCCCCSHHHHHHHHHHHHHHHHHHHTTCCCCCCCSTTEEE---C---CCEECCC
T ss_pred EecCCceEEEeecccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChhhEEE---e-CCCEEEeec
Confidence 999999999999999999999997754 68999999999999999999999999999999999999 3 568999999
Q ss_pred CCccccCC------Ccceecccccccccchhhhhh----------hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHH
Q 042823 172 GSALLFEE------GQVYRDIVGSGFYIAPEVLRR----------RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYD 235 (477)
Q Consensus 172 g~a~~~~~------~~~~~~~~gt~~y~aPE~~~~----------~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~ 235 (477)
|++..... ........||+.|+|||++.+ .++.++|||||||++|+|++|..||..........
T Consensus 174 g~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~ 253 (319)
T 2y4i_B 174 GLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAIIW 253 (319)
T ss_dssp SCCC----------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHHHHHH
T ss_pred CCccccccccccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence 98865421 122234568999999999863 36889999999999999999999999888877777
Q ss_pred HHHcCCccCCCCCCCCCCHHHHHHHHHhcccCccccCCHHHHhc
Q 042823 236 AILQGEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLE 279 (477)
Q Consensus 236 ~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~ 279 (477)
.+..+..... ....+++++.++|.+||..||.+|||+.++++
T Consensus 254 ~~~~~~~~~~--~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~ 295 (319)
T 2y4i_B 254 QMGTGMKPNL--SQIGMGKEISDILLFCWAFEQEERPTFTKLMD 295 (319)
T ss_dssp HHHTTCCCCC--CCSSCCTTHHHHHHHHHCSSTTTSCCHHHHHH
T ss_pred HhccCCCCCC--CcCCCCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence 7766543322 22357889999999999999999999999986
|
| >2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-45 Score=354.42 Aligned_cols=253 Identities=19% Similarity=0.196 Sum_probs=198.4
Q ss_pred cccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCcc-----chhhHHHHHHHHHHHHhcc--------CCCCe
Q 042823 20 DVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKM-----RLAENDMIRREIQIRLYLS--------GQPNV 86 (477)
Q Consensus 20 ~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~-----~~~~~~~~~~e~~~~~~l~--------~hpni 86 (477)
...++|++++.||+|+||+||+|++ +|+.||+|++...... .......+.+|+.+++.+. .||||
T Consensus 17 ~~~~~y~~~~~lG~G~~g~V~~~~~--~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~ni 94 (336)
T 2vuw_A 17 LPTEKLQRCEKIGEGVFGEVFQTIA--DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGF 94 (336)
T ss_dssp SCHHHHHTCEEEEEETTEEEEEEEE--TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCB
T ss_pred cccccchheeeecccCceEEEEEEe--CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCch
Confidence 3457899999999999999999998 6899999999765321 2233467889999988885 48888
Q ss_pred eEEEEEEE------------------------------eCCeEEEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHH
Q 042823 87 VEFKSTYE------------------------------DETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNA 136 (477)
Q Consensus 87 v~~~~~~~------------------------------~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~ 136 (477)
+++.+++. ....+|+|||||++|++.+.+.+ +.+++..++.++.||+.|
T Consensus 95 v~l~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~-~~~~~~~~~~i~~qi~~a 173 (336)
T 2vuw_A 95 IGLNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT-KLSSLATAKSILHQLTAS 173 (336)
T ss_dssp CCEEEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT-TCCCHHHHHHHHHHHHHH
T ss_pred hhhcceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh-cCCCHHHHHHHHHHHHHH
Confidence 88887753 26789999999999987777744 568999999999999999
Q ss_pred HHHHH-HcCCeeccCCCCceeeeecC-----------------CCCCEEEeecCCccccCCCcceecccccccccchhhh
Q 042823 137 VNVCH-SMGVMHRDLKPENFSFISRD-----------------DNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVL 198 (477)
Q Consensus 137 L~~lH-~~~ivH~dlkp~Nil~~~~~-----------------~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~ 198 (477)
|.||| ++||+||||||+|||+...+ ....+||+|||+|...... ..+||+.|+|||++
T Consensus 174 L~~lH~~~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~----~~~gt~~y~aPE~~ 249 (336)
T 2vuw_A 174 LAVAEASLRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG----IVVFCDVSMDEDLF 249 (336)
T ss_dssp HHHHHHHHCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT----EEECCCCTTCSGGG
T ss_pred HHHHHHhCCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC----cEEEeecccChhhh
Confidence 99999 99999999999999995432 1128999999999876543 34799999999999
Q ss_pred hhhcCCccchHhHHHH-HHHHhhCCCCCCCCCh-hhHHHHHHcCC-cc--CCCCCCCCCCHHHHHHHHHhcccCccccCC
Q 042823 199 RRRYGKEIDIWSAGVI-LYILLSGVPPFWAETK-KGTYDAILQGE-ID--FDTDPWPSISSTAKDLVRRMLTKDPKRRIT 273 (477)
Q Consensus 199 ~~~~~~~~DiwslG~i-l~~l~tg~~pf~~~~~-~~~~~~i~~~~-~~--~~~~~~~~~~~~~~~li~~~l~~dp~~R~s 273 (477)
.+..+.++||||+|++ .+++++|..||..... ......+.... .. .....++.+|+++++||.+||++| |
T Consensus 250 ~g~~~~~~Diwsl~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~d-----s 324 (336)
T 2vuw_A 250 TGDGDYQFDIYRLMKKENNNRWGEYHPYSNVLWLHYLTDKMLKQMTFKTKCNTPAMKQIKRKIQEFHRTMLNFS-----S 324 (336)
T ss_dssp CCCSSHHHHHHHHHHHHHTTCTTSCCTHHHHHHHHHHHHHHHHTCCCSSCCCSHHHHHHHHHHHHHHHHGGGSS-----S
T ss_pred cCCCccceehhhhhCCCCcccccccCCCcchhhhhHHHHhhhhhhccCcccchhhhhhcCHHHHHHHHHHhccC-----C
Confidence 8877889999998776 7889999999843211 11222333211 11 111112357889999999999976 9
Q ss_pred HHHHh-cCcccC
Q 042823 274 AAQVL-EHPWLR 284 (477)
Q Consensus 274 ~~~~l-~h~~~~ 284 (477)
+.++| +||||+
T Consensus 325 a~e~l~~Hp~f~ 336 (336)
T 2vuw_A 325 ATDLLCQHSLFK 336 (336)
T ss_dssp HHHHHHHCGGGC
T ss_pred HHHHHhcCCCcC
Confidence 99999 999995
|
| >3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=6.5e-44 Score=346.79 Aligned_cols=253 Identities=19% Similarity=0.263 Sum_probs=194.6
Q ss_pred cccccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhc-cCCCCeeEEEEEEE
Q 042823 16 KAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYL-SGQPNVVEFKSTYE 94 (477)
Q Consensus 16 ~~~~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l-~~hpniv~~~~~~~ 94 (477)
.....+.++|++.+.||+|+||.||+|.+. ++.||+|++.... .....+|..++..+ .+||||+++++++.
T Consensus 30 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~------~~~~~~e~~~~~~~~~~h~~i~~~~~~~~ 101 (337)
T 3mdy_A 30 LVQRTIAKQIQMVKQIGKGRYGEVWMGKWR--GEKVAVKVFFTTE------EASWFRETEIYQTVLMRHENILGFIAADI 101 (337)
T ss_dssp HHHTTHHHHCEEEEEEEEETTEEEEEEEET--TEEEEEEEEEGGG------HHHHHHHHHHHTSTTCCCTTBCCEEEEEE
T ss_pred ccccccccceEEEeEeecCCCeEEEEEEEC--CceEEEEEEeccc------cchhhhHHHHHHHHhhcCCCeeeEEEEEc
Confidence 345677889999999999999999999874 8999999985432 22333444444333 27999999999998
Q ss_pred eC----CeEEEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHc--------CCeeccCCCCceeeeecCC
Q 042823 95 DE----TAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSM--------GVMHRDLKPENFSFISRDD 162 (477)
Q Consensus 95 ~~----~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~--------~ivH~dlkp~Nil~~~~~~ 162 (477)
.. ..+|+|||||+||+|.+++... .+++..+..++.|++.||.|||++ ||+||||||+||++ +.
T Consensus 102 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill---~~ 177 (337)
T 3mdy_A 102 KGTGSWTQLYLITDYHENGSLYDYLKST-TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILV---KK 177 (337)
T ss_dssp ESCGGGCEEEEEECCCTTCBHHHHHHHC-CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEE---CT
T ss_pred cCCCCCCceEEEEeccCCCcHHHHhhcc-CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEE---CC
Confidence 87 7899999999999999999664 689999999999999999999999 99999999999999 77
Q ss_pred CCCEEEeecCCccccCCCcce-----ecccccccccchhhhhhh-cCC------ccchHhHHHHHHHHhhC---------
Q 042823 163 NALLKVTDFGSALLFEEGQVY-----RDIVGSGFYIAPEVLRRR-YGK------EIDIWSAGVILYILLSG--------- 221 (477)
Q Consensus 163 ~~~~kl~Dfg~a~~~~~~~~~-----~~~~gt~~y~aPE~~~~~-~~~------~~DiwslG~il~~l~tg--------- 221 (477)
++.+||+|||++......... ....||+.|+|||++.+. ++. ++|||||||++|+|+||
T Consensus 178 ~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~ 257 (337)
T 3mdy_A 178 NGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEE 257 (337)
T ss_dssp TSCEEECCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCC
T ss_pred CCCEEEEeCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCccccccc
Confidence 889999999999765433221 245799999999999754 333 38999999999999999
Q ss_pred -CCCCCCCCh----hhHHHHHHc-CCccCCCCC---CCCCCHHHHHHHHHhcccCccccCCHHHHhcC
Q 042823 222 -VPPFWAETK----KGTYDAILQ-GEIDFDTDP---WPSISSTAKDLVRRMLTKDPKRRITAAQVLEH 280 (477)
Q Consensus 222 -~~pf~~~~~----~~~~~~i~~-~~~~~~~~~---~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h 280 (477)
..||..... ......... .......+. ...+++.+.++|.+||+.||.+|||+.++++|
T Consensus 258 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~ 325 (337)
T 3mdy_A 258 YQLPYHDLVPSDPSYEDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKT 325 (337)
T ss_dssp CCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHH
T ss_pred ccccHhhhcCCCCchhhhHHHHhhhccCccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHH
Confidence 777754322 112222221 111111100 01356779999999999999999999999875
|
| >1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-43 Score=345.55 Aligned_cols=252 Identities=19% Similarity=0.291 Sum_probs=202.3
Q ss_pred ccccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhc-cCCCCeeEEEEEEEe
Q 042823 17 AYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYL-SGQPNVVEFKSTYED 95 (477)
Q Consensus 17 ~~~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l-~~hpniv~~~~~~~~ 95 (477)
....+.++|++.+.||+|+||.||+|.+ +++.||+|++... ....+.+|..++..+ .+||||+++++++..
T Consensus 36 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~------~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~ 107 (342)
T 1b6c_B 36 VQRTIARTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSR------EERSWFREAEIYQTVMLRHENILGFIAADNK 107 (342)
T ss_dssp HHHHHHHHCEEEEEEEEETTEEEEEEEE--TTEEEEEEEECGG------GHHHHHHHHHHHHHSCCCCTTBCCEEEEEEC
T ss_pred ecccccccEEEEeeecCCCCcEEEEEEE--cCccEEEEEeCch------hHHHHHHHHHHHHHhhcCCCcEEEEEeeecc
Confidence 3456778999999999999999999987 5899999998532 235567788887773 379999999999987
Q ss_pred CC----eEEEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH--------HcCCeeccCCCCceeeeecCCC
Q 042823 96 ET----AVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCH--------SMGVMHRDLKPENFSFISRDDN 163 (477)
Q Consensus 96 ~~----~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH--------~~~ivH~dlkp~Nil~~~~~~~ 163 (477)
.. .+|+||||+++|+|.+++.+. .+++..++.++.|++.||.||| ++||+||||||+||++ +.+
T Consensus 108 ~~~~~~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIll---~~~ 183 (342)
T 1b6c_B 108 DNGTWTQLWLVSDYHEHGSLFDYLNRY-TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILV---KKN 183 (342)
T ss_dssp CCSSCCCEEEEECCCTTCBHHHHHHHC-CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSGGGEEE---CTT
T ss_pred cCCccceeEEEEeecCCCcHHHHHhcc-CccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCHHHEEE---CCC
Confidence 76 899999999999999999764 5899999999999999999999 8999999999999999 778
Q ss_pred CCEEEeecCCccccCCCcc-----eecccccccccchhhhhhh-------cCCccchHhHHHHHHHHhhC----------
Q 042823 164 ALLKVTDFGSALLFEEGQV-----YRDIVGSGFYIAPEVLRRR-------YGKEIDIWSAGVILYILLSG---------- 221 (477)
Q Consensus 164 ~~~kl~Dfg~a~~~~~~~~-----~~~~~gt~~y~aPE~~~~~-------~~~~~DiwslG~il~~l~tg---------- 221 (477)
+.+||+|||++........ .....||+.|+|||++.+. ++.++|||||||++|+|+||
T Consensus 184 ~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~ 263 (342)
T 1b6c_B 184 GTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDY 263 (342)
T ss_dssp SCEEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCC
T ss_pred CCEEEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCccccc
Confidence 8999999999976644331 2345799999999998753 34689999999999999999
Q ss_pred CCCCCCCCh-----hhHHHHHHcCCccCCCC-CC--CCCCHHHHHHHHHhcccCccccCCHHHHhcC
Q 042823 222 VPPFWAETK-----KGTYDAILQGEIDFDTD-PW--PSISSTAKDLVRRMLTKDPKRRITAAQVLEH 280 (477)
Q Consensus 222 ~~pf~~~~~-----~~~~~~i~~~~~~~~~~-~~--~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h 280 (477)
..||..... ......+.........+ .+ ..+++.+.+++.+||+.||++|||+.++++|
T Consensus 264 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~ 330 (342)
T 1b6c_B 264 QLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKT 330 (342)
T ss_dssp CCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHH
T ss_pred ccCccccCcCcccHHHHHHHHHHHHhCCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHH
Confidence 788866432 22333333322221111 00 1234678999999999999999999999875
|
| >3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.9e-44 Score=345.77 Aligned_cols=254 Identities=20% Similarity=0.329 Sum_probs=189.7
Q ss_pred ccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHH--HHhccCCCCeeEEEEEEEe---
Q 042823 21 VMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQI--RLYLSGQPNVVEFKSTYED--- 95 (477)
Q Consensus 21 ~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~--~~~l~~hpniv~~~~~~~~--- 95 (477)
-.++|++++.||+|+||.||+|.+ +++.||+|++.... ......|..+ +..+ +||||+++++.+..
T Consensus 11 ~~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~------~~~~~~e~~~~~~~~~-~h~~i~~~~~~~~~~~~ 81 (336)
T 3g2f_A 11 DLDNLKLLELIGRGRYGAVYKGSL--DERPVAVKVFSFAN------RQNFINEKNIYRVPLM-EHDNIARFIVGDERVTA 81 (336)
T ss_dssp CTTSEEEEEEEEECSSEEEEEEEE--TTEEEEEEEEEGGG------HHHHHHHHHHHTSTTC-CCTTBCCEEEEEEEECT
T ss_pred ChHHhheeeecccCCCeEEEEEEE--CCeEEEEEEeeccc------hhhHHHHHHHHHHHhc-cCcchhhheeccccccc
Confidence 457899999999999999999976 68999999986432 2223333333 3335 79999999986542
Q ss_pred --CCeEEEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHc---------CCeeccCCCCceeeeecCCCC
Q 042823 96 --ETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSM---------GVMHRDLKPENFSFISRDDNA 164 (477)
Q Consensus 96 --~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~---------~ivH~dlkp~Nil~~~~~~~~ 164 (477)
...+|+|||||+||+|.+++.... .++..+..++.||+.||.|||+. ||+||||||+|||+ +..+
T Consensus 82 ~~~~~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill---~~~~ 157 (336)
T 3g2f_A 82 DGRMEYLLVMEYYPNGSLXKYLSLHT-SDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLV---KNDG 157 (336)
T ss_dssp TSCEEEEEEECCCTTCBHHHHHHHCC-BCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEE---CTTS
T ss_pred CCCceEEEEEecCCCCcHHHHHhhcc-cchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEE---cCCC
Confidence 346899999999999999997655 58899999999999999999999 99999999999999 6778
Q ss_pred CEEEeecCCccccCCCc---------ceecccccccccchhhhhh--------hcCCccchHhHHHHHHHHhhCCCCCCC
Q 042823 165 LLKVTDFGSALLFEEGQ---------VYRDIVGSGFYIAPEVLRR--------RYGKEIDIWSAGVILYILLSGVPPFWA 227 (477)
Q Consensus 165 ~~kl~Dfg~a~~~~~~~---------~~~~~~gt~~y~aPE~~~~--------~~~~~~DiwslG~il~~l~tg~~pf~~ 227 (477)
.+||+|||++....... ......||+.|+|||++.+ .++.++|||||||++|+|++|..||..
T Consensus 158 ~~kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~ 237 (336)
T 3g2f_A 158 TCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFP 237 (336)
T ss_dssp CEEECCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGST
T ss_pred cEEEeeccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCC
Confidence 99999999997654321 1224579999999999864 467899999999999999999777643
Q ss_pred CChh-----------------hHHHHHHcCCccCC--CCCCC---CCCHHHHHHHHHhcccCccccCCHHHHhc------
Q 042823 228 ETKK-----------------GTYDAILQGEIDFD--TDPWP---SISSTAKDLVRRMLTKDPKRRITAAQVLE------ 279 (477)
Q Consensus 228 ~~~~-----------------~~~~~i~~~~~~~~--~~~~~---~~~~~~~~li~~~l~~dp~~R~s~~~~l~------ 279 (477)
.... .............+ +..++ .+++.+.+||.+||+.||++|||+.++++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll 317 (336)
T 3g2f_A 238 GESVPEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELM 317 (336)
T ss_dssp TSCCCCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHH
T ss_pred ccchhHHHHhhhcccCCCchHHHHHhhhcccccCCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHH
Confidence 2210 11111111111111 11111 24568999999999999999999999954
Q ss_pred CcccCcCC
Q 042823 280 HPWLRESG 287 (477)
Q Consensus 280 h~~~~~~~ 287 (477)
++|-++..
T Consensus 318 ~~~~~~~~ 325 (336)
T 3g2f_A 318 MIWERNKS 325 (336)
T ss_dssp HCCCC---
T ss_pred HHHHhccc
Confidence 66665543
|
| >2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-43 Score=339.72 Aligned_cols=253 Identities=19% Similarity=0.262 Sum_probs=204.1
Q ss_pred ccccccccccccccccccCCeEEEEEE----EccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEE
Q 042823 17 AYEDVMLHYFFGRMLGRGQFGVSYLCT----ENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKST 92 (477)
Q Consensus 17 ~~~~~~~~Y~~~~~iG~G~~g~V~~~~----~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~ 92 (477)
+......+|++++.||+|+||.||+|. +..+++.||+|++... .......+.+|+.++..+ +||||++++++
T Consensus 35 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~ 110 (326)
T 2w1i_A 35 PTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS---TEEHLRDFEREIEILKSL-QHDNIVKYKGV 110 (326)
T ss_dssp --CCCGGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSC---CSHHHHHHHHHHHHHHTC-CCTTBCCEEEE
T ss_pred ccccCHHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccC---CHHHHHHHHHHHHHHHhC-CCCCeeeEEEE
Confidence 334456679999999999999999998 4668999999998653 234456788999999999 79999999999
Q ss_pred EEeCC--eEEEEEeccCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEe
Q 042823 93 YEDET--AVHVVMELCEGGDLFDRIIAK-GYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVT 169 (477)
Q Consensus 93 ~~~~~--~~~lv~e~~~gg~L~~~l~~~-~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~ 169 (477)
+...+ .+++||||++|++|.+++... ..+++..+..++.|++.||.|||++||+||||||+||++ +.++.+||+
T Consensus 111 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli---~~~~~~kL~ 187 (326)
T 2w1i_A 111 CYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILV---ENENRVKIG 187 (326)
T ss_dssp ECC----CCEEEECCCTTCBHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEE---EETTEEEEC
T ss_pred EEecCCCceEEEEECCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEeccCCCcceEEE---cCCCcEEEe
Confidence 86544 789999999999999999876 458999999999999999999999999999999999999 566789999
Q ss_pred ecCCccccCCCcc----eecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChh-------------
Q 042823 170 DFGSALLFEEGQV----YRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKK------------- 231 (477)
Q Consensus 170 Dfg~a~~~~~~~~----~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~------------- 231 (477)
|||++........ .....+++.|+|||++.+ .++.++|||||||++|+|+||..||......
T Consensus 188 Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~ 267 (326)
T 2w1i_A 188 DFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQM 267 (326)
T ss_dssp CCTTCEECCSSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHH
T ss_pred cCcchhhccccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhh
Confidence 9999987654332 123456778999999875 5889999999999999999999998542110
Q ss_pred ---hHHHHHHcCCccCCCCCCCCCCHHHHHHHHHhcccCccccCCHHHHhc
Q 042823 232 ---GTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLE 279 (477)
Q Consensus 232 ---~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~ 279 (477)
.....+..+ ... +..+.+|+++.++|.+||+.||++|||+.++++
T Consensus 268 ~~~~~~~~~~~~-~~~--~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~ 315 (326)
T 2w1i_A 268 IVFHLIELLKNN-GRL--PRPDGCPDEIYMIMTECWNNNVNQRPSFRDLAL 315 (326)
T ss_dssp HHHHHHHHHHTT-CCC--CCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred hHHHHHHHhhcC-CCC--CCCCcccHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 011112221 111 223568999999999999999999999999974
|
| >2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.9e-43 Score=364.70 Aligned_cols=248 Identities=22% Similarity=0.286 Sum_probs=204.6
Q ss_pred cccccccc-cccccCCeEEEEEEEc--cCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCe
Q 042823 22 MLHYFFGR-MLGRGQFGVSYLCTEN--STNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETA 98 (477)
Q Consensus 22 ~~~Y~~~~-~iG~G~~g~V~~~~~~--~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~ 98 (477)
.++|.+.+ .||+|+||.||+|.++ .++..||||++.... .......+.+|++++..+ +|||||++++++.. +.
T Consensus 334 ~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~~E~~il~~l-~hpniv~l~~~~~~-~~ 409 (613)
T 2ozo_A 334 RDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGT--EKADTEEMMREAQIMHQL-DNPYIVRLIGVCQA-EA 409 (613)
T ss_dssp TTSEEEEEEEEEECSSSEEEEEEEECSSCEEEEEEEECCCCC--SSTTHHHHHHHHHHHTTC-CCTTBCCEEEEEES-SS
T ss_pred ccceeEcCcEEecCCCcEEEEEEEecCCCcEEEEEEEcCCCC--ChHHHHHHHHHHHHHHhC-CCCCEeeEEEEecc-CC
Confidence 34455555 8999999999999875 356679999986542 223467789999999999 79999999999976 56
Q ss_pred EEEEEeccCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCcccc
Q 042823 99 VHVVMELCEGGDLFDRIIAK-GYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLF 177 (477)
Q Consensus 99 ~~lv~e~~~gg~L~~~l~~~-~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~ 177 (477)
+|+|||||+||+|.+++... ..+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++...
T Consensus 410 ~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiHrDlkp~NILl---~~~~~vkL~DFGla~~~ 486 (613)
T 2ozo_A 410 LMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRNLAARNVLL---VNRHYAKISDFGLSKAL 486 (613)
T ss_dssp EEEEEECCTTCBHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE---EETTEEEECCCSTTTTC
T ss_pred eEEEEEeCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCcCCHHHEEE---cCCCcEEEeeccCcccc
Confidence 99999999999999999754 458999999999999999999999999999999999999 56778999999999876
Q ss_pred CCCcce----ecccccccccchhhhh-hhcCCccchHhHHHHHHHHhh-CCCCCCCCChhhHHHHHHcCCccCCCCCCCC
Q 042823 178 EEGQVY----RDIVGSGFYIAPEVLR-RRYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQGEIDFDTDPWPS 251 (477)
Q Consensus 178 ~~~~~~----~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~l~t-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 251 (477)
...... ....+|+.|+|||++. +.++.++|||||||++|+|++ |..||.+....+....+..+... ...+.
T Consensus 487 ~~~~~~~~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~~~~~~---~~p~~ 563 (613)
T 2ozo_A 487 GADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRM---ECPPE 563 (613)
T ss_dssp C--------------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSHHHHHHHHTTCCC---CCCTT
T ss_pred cCCCceeeeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCCC---CCCCc
Confidence 433211 1234568899999987 468999999999999999998 99999998888888887776432 12246
Q ss_pred CCHHHHHHHHHhcccCccccCCHHHHhc
Q 042823 252 ISSTAKDLVRRMLTKDPKRRITAAQVLE 279 (477)
Q Consensus 252 ~~~~~~~li~~~l~~dp~~R~s~~~~l~ 279 (477)
+++++.++|.+||+.||++|||+.++++
T Consensus 564 ~~~~l~~li~~cl~~dP~~RPs~~~l~~ 591 (613)
T 2ozo_A 564 CPPELYALMSDCWIYKWEDRPDFLTVEQ 591 (613)
T ss_dssp CCHHHHHHHHHTTCSSTTTSCCHHHHHH
T ss_pred CCHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence 8999999999999999999999999853
|
| >3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-43 Score=333.66 Aligned_cols=232 Identities=15% Similarity=0.065 Sum_probs=191.4
Q ss_pred cccc-cccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEE
Q 042823 16 KAYE-DVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYE 94 (477)
Q Consensus 16 ~~~~-~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~ 94 (477)
.+.. .+.++|++.+.||+|+||.||+|.+..+++.||+|++.............+.+|+.++..+ +||||+++++++.
T Consensus 23 ~~g~~~~~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~hp~iv~~~~~~~ 101 (286)
T 3uqc_A 23 VPGARIANGRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRI-DKPGVARVLDVVH 101 (286)
T ss_dssp CTTCEETTTTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTC-CCTTBCCEEEEEE
T ss_pred CCCCEEecCcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcC-CCCCcceeeEEEE
Confidence 4444 6778999999999999999999999999999999999766544445567788999999998 7999999999999
Q ss_pred eCCeEEEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCc
Q 042823 95 DETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSA 174 (477)
Q Consensus 95 ~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a 174 (477)
..+..|+|||||+|++|.+++.. + ....++..++.|++.||.|||++||+||||||+||++ +.++.+||+++|
T Consensus 102 ~~~~~~lv~e~~~g~~L~~~l~~-~-~~~~~~~~i~~ql~~aL~~lH~~givH~Dikp~NIll---~~~g~~kl~~~~-- 174 (286)
T 3uqc_A 102 TRAGGLVVAEWIRGGSLQEVADT-S-PSPVGAIRAMQSLAAAADAAHRAGVALSIDHPSRVRV---SIDGDVVLAYPA-- 174 (286)
T ss_dssp ETTEEEEEEECCCEEEHHHHHTT-C-CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEE---ETTSCEEECSCC--
T ss_pred ECCcEEEEEEecCCCCHHHHHhc-C-CChHHHHHHHHHHHHHHHHHHHCCCccCCCCcccEEE---cCCCCEEEEecc--
Confidence 99999999999999999999854 3 4666789999999999999999999999999999999 677889987443
Q ss_pred cccCCCcceecccccccccchhhhhhhcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHH---HHHcCCccCCCCCCCC
Q 042823 175 LLFEEGQVYRDIVGSGFYIAPEVLRRRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYD---AILQGEIDFDTDPWPS 251 (477)
Q Consensus 175 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~---~i~~~~~~~~~~~~~~ 251 (477)
|++| ++.++|||||||++|+|+||..||.+.+...... ....+.........+.
T Consensus 175 -----------------~~~~------~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (286)
T 3uqc_A 175 -----------------TMPD------ANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPAERDTAGQPIEPADIDRD 231 (286)
T ss_dssp -----------------CCTT------CCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEECCBCTTSCBCCHHHHCTT
T ss_pred -----------------ccCC------CCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHHHHHHhccCCCChhhcccC
Confidence 3443 6889999999999999999999998765433211 1111111111112356
Q ss_pred CCHHHHHHHHHhcccCccccCCHHHHhc
Q 042823 252 ISSTAKDLVRRMLTKDPKRRITAAQVLE 279 (477)
Q Consensus 252 ~~~~~~~li~~~l~~dp~~R~s~~~~l~ 279 (477)
+|+.+.++|.+||+.||.+| |+.++++
T Consensus 232 ~~~~l~~li~~~l~~dP~~R-s~~el~~ 258 (286)
T 3uqc_A 232 IPFQISAVAARSVQGDGGIR-SASTLLN 258 (286)
T ss_dssp SCHHHHHHHHHHHCTTSSCC-CHHHHHH
T ss_pred CCHHHHHHHHHHcccCCccC-CHHHHHH
Confidence 89999999999999999999 9999986
|
| >2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-42 Score=362.71 Aligned_cols=253 Identities=23% Similarity=0.288 Sum_probs=210.3
Q ss_pred ccccccccccccccccccCCeEEEEEEEccC---CceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEE
Q 042823 17 AYEDVMLHYFFGRMLGRGQFGVSYLCTENST---NRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTY 93 (477)
Q Consensus 17 ~~~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~---~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~ 93 (477)
.++...++|++++.||+|+||.||+|.+..+ +..||+|++.... .......+.+|+.++..+ +||||+++++++
T Consensus 384 ~~~i~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l-~HpnIv~l~~~~ 460 (656)
T 2j0j_A 384 DYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCT--SDSVREKFLQEALTMRQF-DHPHIVKLIGVI 460 (656)
T ss_dssp GTBCCGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTT--CHHHHHHHHHHHHHHHHC-CCTTBCCEEEEE
T ss_pred ccccccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccC--CHHHHHHHHHHHHHHHhC-CCCCCCeEEEEE
Confidence 4455667899999999999999999998654 4579999875432 234456788999999999 799999999998
Q ss_pred EeCCeEEEEEeccCCCchHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecC
Q 042823 94 EDETAVHVVMELCEGGDLFDRIIAKG-YNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFG 172 (477)
Q Consensus 94 ~~~~~~~lv~e~~~gg~L~~~l~~~~-~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg 172 (477)
. ++..|+|||||+||+|.+++...+ .+++..+..++.|++.||.|||++||+||||||+|||+ +.++.+||+|||
T Consensus 461 ~-~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDikp~NILl---~~~~~vkL~DFG 536 (656)
T 2j0j_A 461 T-ENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLV---SSNDCVKLGDFG 536 (656)
T ss_dssp C-SSSCEEEEECCTTCBHHHHHHHTTTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE---EETTEEEECCCC
T ss_pred e-cCceEEEEEcCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCccccccchHhEEE---eCCCCEEEEecC
Confidence 5 456899999999999999998654 68999999999999999999999999999999999999 567789999999
Q ss_pred CccccCCCcc--eecccccccccchhhhhh-hcCCccchHhHHHHHHHHhh-CCCCCCCCChhhHHHHHHcCCccCCCCC
Q 042823 173 SALLFEEGQV--YRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQGEIDFDTDP 248 (477)
Q Consensus 173 ~a~~~~~~~~--~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~t-g~~pf~~~~~~~~~~~i~~~~~~~~~~~ 248 (477)
++........ .....+|+.|+|||++.+ .++.++|||||||++|+|++ |.+||.+....+....+..+... +.
T Consensus 537 ~a~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~~~~i~~~~~~---~~ 613 (656)
T 2j0j_A 537 LSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERL---PM 613 (656)
T ss_dssp CCCSCCC----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHHTCCC---CC
T ss_pred CCeecCCCcceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCCC---CC
Confidence 9987644332 123456789999999864 68999999999999999997 99999988888887777765432 12
Q ss_pred CCCCCHHHHHHHHHhcccCccccCCHHHHhc
Q 042823 249 WPSISSTAKDLVRRMLTKDPKRRITAAQVLE 279 (477)
Q Consensus 249 ~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~ 279 (477)
.+.+|+.+.++|.+||+.||.+|||+.++++
T Consensus 614 ~~~~~~~l~~li~~~l~~dP~~RPs~~el~~ 644 (656)
T 2j0j_A 614 PPNCPPTLYSLMTKCWAYDPSRRPRFTELKA 644 (656)
T ss_dssp CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred CccccHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence 3568999999999999999999999999975
|
| >3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-43 Score=354.17 Aligned_cols=248 Identities=15% Similarity=0.163 Sum_probs=191.2
Q ss_pred ccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCC-----------------
Q 042823 23 LHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPN----------------- 85 (477)
Q Consensus 23 ~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpn----------------- 85 (477)
..|.+.+.||+|+||+||+|.+..+|+.||||++.............+.+|+.++..+.+++|
T Consensus 78 ~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 157 (413)
T 3dzo_A 78 RTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLV 157 (413)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEE
T ss_pred eeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhc
Confidence 358889999999999999999999999999999874443333445678899998887742122
Q ss_pred ----eeEEEEEEEe-----CCeEEEEEeccCCCchHHHHHH-------cCCCCHHHHHHHHHHHHHHHHHHHHcCCeecc
Q 042823 86 ----VVEFKSTYED-----ETAVHVVMELCEGGDLFDRIIA-------KGYNSERDAATVLRAIVNAVNVCHSMGVMHRD 149 (477)
Q Consensus 86 ----iv~~~~~~~~-----~~~~~lv~e~~~gg~L~~~l~~-------~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~d 149 (477)
...+..++.. ...++++|+++ +++|.+++.. ...+++..+..++.||+.||.|||++||+|||
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~iiHrD 236 (413)
T 3dzo_A 158 KDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTY 236 (413)
T ss_dssp ECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEECSC
T ss_pred ccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCC
Confidence 1112222222 23478888877 5699988852 23467778889999999999999999999999
Q ss_pred CCCCceeeeecCCCCCEEEeecCCccccCCCcceecccccccccchhhhh----------h-hcCCccchHhHHHHHHHH
Q 042823 150 LKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLR----------R-RYGKEIDIWSAGVILYIL 218 (477)
Q Consensus 150 lkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~----------~-~~~~~~DiwslG~il~~l 218 (477)
|||+|||+ +.++.+||+|||++...... ....+| +.|+|||++. + .++.++|||||||++|+|
T Consensus 237 iKp~NILl---~~~~~~kL~DFG~a~~~~~~--~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~el 310 (413)
T 3dzo_A 237 LRPVDIVL---DQRGGVFLTGFEHLVRDGAS--AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWI 310 (413)
T ss_dssp CCGGGEEE---CTTCCEEECCGGGCEETTEE--ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHHH
T ss_pred cccceEEE---ecCCeEEEEeccceeecCCc--cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHHHH
Confidence 99999999 77888999999998765432 445678 9999999983 2 377899999999999999
Q ss_pred hhCCCCCCCCChhhHHHHHHcCCccCCCCCCCCCCHHHHHHHHHhcccCccccCCHHHHhcCcccCc
Q 042823 219 LSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRE 285 (477)
Q Consensus 219 ~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~ 285 (477)
+||..||...........+.. .++.+|+.+.+||.+||+.||++|||+.++++||||+.
T Consensus 311 ltg~~Pf~~~~~~~~~~~~~~--------~~~~~~~~~~~li~~~l~~dP~~Rpt~~~~l~~~~~~~ 369 (413)
T 3dzo_A 311 WCADLPNTDDAALGGSEWIFR--------SCKNIPQPVRALLEGFLRYPKEDRLLPLQAMETPEYEQ 369 (413)
T ss_dssp HHSSCCCCTTGGGSCSGGGGS--------SCCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHH
T ss_pred HHCCCCCCCcchhhhHHHHHh--------hcccCCHHHHHHHHHHccCChhhCcCHHHHHhCHHHHH
Confidence 999999987654433322221 23468899999999999999999999999999999964
|
| >2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-43 Score=371.38 Aligned_cols=246 Identities=24% Similarity=0.311 Sum_probs=203.0
Q ss_pred ccccccccccccccccccCCeEEEEEEEcc-CCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEe
Q 042823 17 AYEDVMLHYFFGRMLGRGQFGVSYLCTENS-TNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYED 95 (477)
Q Consensus 17 ~~~~~~~~Y~~~~~iG~G~~g~V~~~~~~~-~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~ 95 (477)
..+.+.++|++.+.||+|+||+||+|.+.. +++.||+|++.... .......+.+|+.++..+ +||||+++++++..
T Consensus 74 ~g~~~~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~ 150 (681)
T 2pzi_A 74 PGDIVAGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSG--DAEAQAMAMAERQFLAEV-VHPSIVQIFNFVEH 150 (681)
T ss_dssp TTCEETTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSC--CHHHHHHHHHHHGGGGGC-CCTTBCCEEEEEEE
T ss_pred CCCEeCCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccC--CHHHHHHHHHHHHHHHhc-CCCCcCeEeeeEee
Confidence 345677999999999999999999999976 78999999886432 234456788999999999 79999999999987
Q ss_pred CCe-----EEEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEee
Q 042823 96 ETA-----VHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTD 170 (477)
Q Consensus 96 ~~~-----~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~D 170 (477)
.+. .||||||++|++|.+++.. .+++.++..++.||+.||.|||++||+||||||+||++ +. ..+||+|
T Consensus 151 ~~~~~~~~~~lv~E~~~g~~L~~~~~~--~l~~~~~~~~~~qi~~aL~~lH~~giiHrDlkp~NIll---~~-~~~kl~D 224 (681)
T 2pzi_A 151 TDRHGDPVGYIVMEYVGGQSLKRSKGQ--KLPVAEAIAYLLEILPALSYLHSIGLVYNDLKPENIML---TE-EQLKLID 224 (681)
T ss_dssp ECTTSCEEEEEEEECCCCEECC----C--CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE---CS-SCEEECC
T ss_pred cCCCCCceeEEEEEeCCCCcHHHHHhC--CCCHHHHHHHHHHHHHHHHHHHHCCCeecccChHHeEE---eC-CcEEEEe
Confidence 665 7999999999999987754 68999999999999999999999999999999999999 33 4899999
Q ss_pred cCCccccCCCcceecccccccccchhhhhhhcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCC
Q 042823 171 FGSALLFEEGQVYRDIVGSGFYIAPEVLRRRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWP 250 (477)
Q Consensus 171 fg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~ 250 (477)
||++...... ....||+.|+|||++.+.++.++|||||||++|+|++|.+||.+..... .. ...+..
T Consensus 225 FG~a~~~~~~---~~~~gt~~y~aPE~~~~~~~~~sDi~slG~~l~~l~~g~~~~~~~~~~~---------~~-~~~~~~ 291 (681)
T 2pzi_A 225 LGAVSRINSF---GYLYGTPGFQAPEIVRTGPTVATDIYTVGRTLAALTLDLPTRNGRYVDG---------LP-EDDPVL 291 (681)
T ss_dssp CTTCEETTCC---SCCCCCTTTSCTTHHHHCSCHHHHHHHHHHHHHHHHSCCCEETTEECSS---------CC-TTCHHH
T ss_pred cccchhcccC---CccCCCccccCHHHHcCCCCCceehhhhHHHHHHHHhCCCCCccccccc---------cc-cccccc
Confidence 9999876543 3457999999999998888999999999999999999999986522110 00 001111
Q ss_pred CCCHHHHHHHHHhcccCccccCCHHHHhcCcccC
Q 042823 251 SISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLR 284 (477)
Q Consensus 251 ~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~ 284 (477)
..++.+.++|.+||+.||.+||+..+++.|+|+.
T Consensus 292 ~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~ 325 (681)
T 2pzi_A 292 KTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTG 325 (681)
T ss_dssp HHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHH
T ss_pred ccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHH
Confidence 2467899999999999999999999999888764
|
| >4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-37 Score=317.10 Aligned_cols=232 Identities=16% Similarity=0.106 Sum_probs=161.6
Q ss_pred ccccccCCeEEEEEEEccCCceEEEEEeecCCcc-------chhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEE
Q 042823 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKM-------RLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHV 101 (477)
Q Consensus 29 ~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~-------~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~l 101 (477)
...+.|+.|.+..++....|+.||+|++.+.... .......+.+|+.+++++..||||+++++++++++.+||
T Consensus 240 ~~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yL 319 (569)
T 4azs_A 240 NQPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWL 319 (569)
T ss_dssp CC-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEE
T ss_pred hccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEE
Confidence 3567888888888888889999999999765321 123456789999999999889999999999999999999
Q ss_pred EEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCCC-
Q 042823 102 VMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEG- 180 (477)
Q Consensus 102 v~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~- 180 (477)
|||||+|++|.++|.+.+.+++. .|+.||+.||.|||++|||||||||+|||+ +.++.+||+|||+|+.....
T Consensus 320 VMEyv~G~~L~d~i~~~~~l~~~---~I~~QIl~AL~ylH~~GIIHRDIKPeNILL---~~dg~vKL~DFGlAr~~~~~~ 393 (569)
T 4azs_A 320 VMEKLPGRLLSDMLAAGEEIDRE---KILGSLLRSLAALEKQGFWHDDVRPWNVMV---DARQHARLIDFGSIVTTPQDC 393 (569)
T ss_dssp EEECCCSEEHHHHHHTTCCCCHH---HHHHHHHHHHHHHHHTTCEESCCCGGGEEE---CTTSCEEECCCTTEESCC---
T ss_pred EEecCCCCcHHHHHHhCCCCCHH---HHHHHHHHHHHHHHHCCceeccCchHhEEE---CCCCCEEEeecccCeeCCCCC
Confidence 99999999999999999888765 478999999999999999999999999999 77889999999999876443
Q ss_pred cceecccccccccchhhhhhhcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCCCCHHHHHHH
Q 042823 181 QVYRDIVGSGFYIAPEVLRRRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLV 260 (477)
Q Consensus 181 ~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li 260 (477)
....+.+||+.|+|||++.+.+..++|+||+|++++.|.++..|+. ..+... +.. ...+..+.
T Consensus 394 ~~~~t~vGTp~YmAPE~l~g~~~~~~d~~s~g~~~~~l~~~~~~~~--------~~l~~~----~~~-----~~~~~~l~ 456 (569)
T 4azs_A 394 SWPTNLVQSFFVFVNELFAENKSWNGFWRSAPVHPFNLPQPWSNWL--------YAVWQE----PVE-----RWNFVLLL 456 (569)
T ss_dssp CCSHHHHHHHHHHHHHHC-----------------CCCCTTHHHHH--------HHHHTS----CGG-----GCSHHHHH
T ss_pred ccccCceechhhccHHHhCCCCCCcccccccccchhhhccccchhH--------HHhhcC----CCC-----CCcHHHHH
Confidence 2345578999999999999999999999999999988877655531 111111 111 11245666
Q ss_pred HHhcccCccccCCHHHHhcCccc
Q 042823 261 RRMLTKDPKRRITAAQVLEHPWL 283 (477)
Q Consensus 261 ~~~l~~dp~~R~s~~~~l~h~~~ 283 (477)
..+...+|..||.......++|.
T Consensus 457 ~~l~~~~~~~~~~~~~~~~~~~~ 479 (569)
T 4azs_A 457 ALFEKKAKLPSAEQQRGATEQWI 479 (569)
T ss_dssp HHHHTGGGSCCGGGSSCCHHHHH
T ss_pred HHHhCCCCCCCCChhhhccchhH
Confidence 77777788877776665555554
|
| >3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.8e-29 Score=258.92 Aligned_cols=184 Identities=18% Similarity=0.138 Sum_probs=142.8
Q ss_pred cccccccccCCeEEEEEEEccCCceEEEEEeecCCccch-----hhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEE
Q 042823 26 FFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRL-----AENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVH 100 (477)
Q Consensus 26 ~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~-----~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~ 100 (477)
...+.||+|+||.||+|. ..++.+++|+...+..... .....+.+|+.++.++ +||||+++..++......|
T Consensus 339 ~~~~~LG~G~fg~Vy~~~--~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l-~h~nIv~~~~~~~~~~~~~ 415 (540)
T 3en9_A 339 IPEHLIGKGAEADIKRDS--YLDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALV-KDFGIPAPYIFDVDLDNKR 415 (540)
T ss_dssp ---------CCEEEEEEE--CSSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHG-GGGTCCCCCEEEEETTTTE
T ss_pred CCCCEEeeCCCEEEEEEE--ECCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhc-CCCCcCceEEEEEeCCccE
Confidence 346799999999999994 4678899998754332211 1234578999999999 7999996555555677789
Q ss_pred EEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCCC
Q 042823 101 VVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEG 180 (477)
Q Consensus 101 lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~ 180 (477)
+|||||+|++|.+++.. +..++.|++.||.|||++||+||||||+|||+ +. .+||+|||+|+.....
T Consensus 416 lVmE~~~ggsL~~~l~~--------~~~i~~qi~~aL~~LH~~gIiHrDiKp~NILl---~~--~~kL~DFGla~~~~~~ 482 (540)
T 3en9_A 416 IMMSYINGKLAKDVIED--------NLDIAYKIGEIVGKLHKNDVIHNDLTTSNFIF---DK--DLYIIDFGLGKISNLD 482 (540)
T ss_dssp EEEECCCSEEHHHHSTT--------CTHHHHHHHHHHHHHHHTTEECTTCCTTSEEE---SS--SEEECCCTTCEECCCH
T ss_pred EEEECCCCCCHHHHHHH--------HHHHHHHHHHHHHHHHHCcCccCCCCHHHEEE---CC--eEEEEECccCEECCCc
Confidence 99999999999998865 56899999999999999999999999999999 44 8999999999887553
Q ss_pred cc--------eecccccccccchhhhhh---hcCCccchHhHHHHHHHHhhCCCCC
Q 042823 181 QV--------YRDIVGSGFYIAPEVLRR---RYGKEIDIWSAGVILYILLSGVPPF 225 (477)
Q Consensus 181 ~~--------~~~~~gt~~y~aPE~~~~---~~~~~~DiwslG~il~~l~tg~~pf 225 (477)
.. .....||++|+|||++.. .|+..+|+||..+-..+...++.+|
T Consensus 483 ~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY 538 (540)
T 3en9_A 483 EDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARY 538 (540)
T ss_dssp HHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCC
T ss_pred cccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccc
Confidence 22 135689999999999874 5888899999988888777776665
|
| >1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=2.3e-26 Score=216.61 Aligned_cols=158 Identities=23% Similarity=0.244 Sum_probs=122.8
Q ss_pred ccccccccccCCeEEEEEEEccCCceEEEEEeecCCccch---------------hhHHHHHHHHHHHHhccCCCCeeEE
Q 042823 25 YFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRL---------------AENDMIRREIQIRLYLSGQPNVVEF 89 (477)
Q Consensus 25 Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~---------------~~~~~~~~e~~~~~~l~~hpniv~~ 89 (477)
|.+++.||+|+||.||+|.+ .+|+.||+|++........ .....+.+|+.++..+. |++++.
T Consensus 92 ~~~~~~iG~G~~g~Vy~~~~-~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~-~~~v~~- 168 (282)
T 1zar_A 92 DAIGKLMGEGKESAVFNCYS-EKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ-GLAVPK- 168 (282)
T ss_dssp SEEEEEEEECSSEEEEEEEE-TTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT-TSSSCC-
T ss_pred EEecCEeccCCCceEEEEEe-CCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc-CCCcCe-
Confidence 44559999999999999999 8899999999864321100 13456889999999995 454444
Q ss_pred EEEEEeCCeEEEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEe
Q 042823 90 KSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVT 169 (477)
Q Consensus 90 ~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~ 169 (477)
++.. +..|+|||||+||+|.+ +. ......++.|++.||.|||++||+||||||+|||+ + ++.+||+
T Consensus 169 --~~~~-~~~~lvmE~~~g~~L~~-l~------~~~~~~i~~qi~~~l~~lH~~giiHrDlkp~NILl---~-~~~vkl~ 234 (282)
T 1zar_A 169 --VYAW-EGNAVLMELIDAKELYR-VR------VENPDEVLDMILEEVAKFYHRGIVHGDLSQYNVLV---S-EEGIWII 234 (282)
T ss_dssp --EEEE-ETTEEEEECCCCEEGGG-CC------CSCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEE---E-TTEEEEC
T ss_pred --EEec-cceEEEEEecCCCcHHH-cc------hhhHHHHHHHHHHHHHHHHHCCCEeCCCCHHHEEE---E-CCcEEEE
Confidence 4433 45699999999999987 31 23456799999999999999999999999999999 4 7889999
Q ss_pred ecCCccccCCCcceecccccccccchhhhh-----------hhcCCccchHhH
Q 042823 170 DFGSALLFEEGQVYRDIVGSGFYIAPEVLR-----------RRYGKEIDIWSA 211 (477)
Q Consensus 170 Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~-----------~~~~~~~Diwsl 211 (477)
|||+|.. +..+.|||.+. ..|+..+|+|++
T Consensus 235 DFG~a~~------------~~~~~a~e~l~rdv~~i~~~f~~~~~~~~~~~~~ 275 (282)
T 1zar_A 235 DFPQSVE------------VGEEGWREILERDVRNIITYFSRTYRTEKDINSA 275 (282)
T ss_dssp CCTTCEE------------TTSTTHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
T ss_pred ECCCCeE------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCChHHH
Confidence 9999863 44578999874 346777888764
|
| >3i5g_B Myosin regulatory light chain LC-2, mantle muscle; rigor-like, squid, muscle myosin, contractIle protein; 2.60A {Todarodes pacificus} PDB: 3i5f_B 3i5h_B 3i5i_B | Back alignment and structure |
|---|
Probab=99.88 E-value=1.1e-22 Score=173.19 Aligned_cols=137 Identities=16% Similarity=0.318 Sum_probs=125.6
Q ss_pred ccCCchhhHHHHHHhhhcCCCCCCCccHHHHHHHHHhhCCCCCHHHHHHHHHHhhccchHHHHHhcCCh-----HHHHHH
Q 042823 318 EYLPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNSSTLESLCENLPT-----KEKQKL 392 (477)
Q Consensus 318 ~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~~~~~l 392 (477)
..++++++..++++|..+|.|++|.|+.+||..+++.+|..+++.++..++...++..+|.+|+..+.. ...+.+
T Consensus 8 ~~Lt~~qi~elk~~F~~~D~d~dG~I~~~El~~~l~~lg~~~~~~~~~~~~~~~~~~i~f~ef~~~~~~~~~~~~~~~~l 87 (153)
T 3i5g_B 8 VKLSQRQMQELKEAFTMIDQDRDGFIGMEDLKDMFSSLGRVPPDDELNAMLKECPGQLNFTAFLTLFGEKVSGTDPEDAL 87 (153)
T ss_dssp TTCCHHHHHHHHHHHHHHCCSTTSCCCHHHHHHHHHHTTSCCCHHHHHHHHHTSSSCCCSHHHHHTTTTTTTTCCCHHHH
T ss_pred cCCCHHHHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHcCCCccHHHHHHHHHhccCCccHHHHHHHHHhhhcccccHHHH
Confidence 346888999999999999999999999999999999999999999999999988888888888776533 235689
Q ss_pred HHHhhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhh
Q 042823 393 MEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDI 455 (477)
Q Consensus 393 ~~~F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~ 455 (477)
+.+|+.||+|++|+|+.+||+.+|..+|.++++++++.|++.+|.+ ||.|+|+||+.+|.+.
T Consensus 88 ~~aF~~fD~d~~G~I~~~el~~~l~~~g~~ls~~ei~~~~~~~D~~-dG~I~y~EF~~~m~~~ 149 (153)
T 3i5g_B 88 RNAFSMFDEDGQGFIPEDYLKDLLENMGDNFSKEEIKNVWKDAPLK-NKQFNYNKMVDIKGKA 149 (153)
T ss_dssp HHHHHTTCSSCSSCCCHHHHHHHHHSSSSCCCHHHHHHHHTTCCEE-TTEECHHHHHHHHHCS
T ss_pred HHHHhccccCCCCeEeHHHHHHHHHHcCCcCCHHHHHHHHHHhCCC-cCEEcHHHHHHHhcCC
Confidence 9999999999999999999999999999999999999999999988 9999999999999753
|
| >3pm8_A PFCDPK2, calcium-dependent protein kinase 2; malaria, structural genomics, structural genomics CONS SGC; 2.00A {Plasmodium falciparum K1} | Back alignment and structure |
|---|
Probab=99.88 E-value=1.6e-22 Score=180.09 Aligned_cols=176 Identities=24% Similarity=0.406 Sum_probs=142.3
Q ss_pred cCcccCcCCCC--CCchHHHHHHHHHhhhhHHHHhhhhhhhccCCchhhHHHHHHhhhcCCCCCCCccHHHHHHHHHhhC
Q 042823 279 EHPWLRESGEA--SDDTSVILRMKQFRRMNKLKKLTIKVIVEYLPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVG 356 (477)
Q Consensus 279 ~h~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~ 356 (477)
.|||.+..... .....++.++++|...+++++..+..+...++.++...+.+.|..+|.+++|.|+.+||..+++.+|
T Consensus 8 ~~~~~~~~~~~~~~l~~~~~~~l~~f~~~~~lk~~~l~~i~~~l~~~e~~~l~~~F~~~D~d~~G~Is~~El~~~l~~~g 87 (197)
T 3pm8_A 8 SSGRENLYFQGHVELSSTLLKNLKNFKKENELKKIALTIIAKHLCDVEINNLRNIFIALDVDNSGTLSSQEILDGLKKIG 87 (197)
T ss_dssp ---------CCSCCCCTTHHHHHHHTTTSCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHC
T ss_pred cchHhhhccCCCCCCCHHHHHHHHHHHHccHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHhC
Confidence 48898765433 3467789999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHhhcc----chHHHHHhcCChH----HHHHHHHHhhhhcCCCCCCcCHHHHHHHHHHc--CCCCCHH
Q 042823 357 SMLTEFDVKHLMEAVKNS----STLESLCENLPTK----EKQKLMEKFREMDTDNSDTLTLSELKAGLAKL--GSALEES 426 (477)
Q Consensus 357 ~~~~~~~~~~~~~~~d~~----~~~~~~~~~~~~~----~~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~--g~~~~~~ 426 (477)
..++..++..+++.+|.+ .++.+|+..+... ..+.++.+|+.||.|++|+|+.+||+.++..+ |..++++
T Consensus 88 ~~~~~~~~~~l~~~~D~d~~g~I~~~EF~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~Is~~El~~~l~~~~~~~~~~~~ 167 (197)
T 3pm8_A 88 YQKIPPDIHQVLRDIDSNASGQIHYTDFLAATIDKQTYLKKEVCLIPFKFFDIDGNGKISVEELKRIFGRDDIENPLIDK 167 (197)
T ss_dssp ----CHHHHHHHHC-------CEEHHHHHHTTCCHHHHCSHHHHHHHHHHHCTTCSSEECHHHHHHHHC----CCHHHHH
T ss_pred CCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHHhhhhHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccCCCCCHH
Confidence 999999999999998754 3588887766432 34689999999999999999999999999988 7788999
Q ss_pred HHHHHHHHhcCCCCCcccHHHHHHHHHh
Q 042823 427 EVNQYMEAGDIDGNGNIDSIEFVNLMTD 454 (477)
Q Consensus 427 ~i~~~~~~~d~~~~g~i~~~eF~~~~~~ 454 (477)
+++.+++.+|.|+||.|+|+||+.+|.+
T Consensus 168 ~~~~l~~~~D~d~dG~Is~~EF~~~l~~ 195 (197)
T 3pm8_A 168 AIDSLLQEVDLNGDGEIDFHEFMLMMSK 195 (197)
T ss_dssp HHHHHHHHHCTTCSSSEEHHHHHHHHHC
T ss_pred HHHHHHHHHcCCCCCcCcHHHHHHHHHc
Confidence 9999999999999999999999999864
|
| >2lhi_A Calmodulin, serine/threonine-protein phosphatase catalytic subunit A1; yeast calmodulin, CNA1, metal binding protein; NMR {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.88 E-value=3.5e-22 Score=174.31 Aligned_cols=137 Identities=26% Similarity=0.472 Sum_probs=122.1
Q ss_pred ccCCchhhHHHHHHhhhcCCCCCCCccHHHHHHHHHhhCCCCCHHHHHHHHHHhhccc----hHHHHHhcC-----ChHH
Q 042823 318 EYLPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNSS----TLESLCENL-----PTKE 388 (477)
Q Consensus 318 ~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~----~~~~~~~~~-----~~~~ 388 (477)
..++++++..++++|..+|.|++|.|+.+||..+++.+|..+++.++..++..+|.++ ++.+|...+ ....
T Consensus 3 ~~Lt~eqi~elk~~F~~~D~d~dG~I~~~El~~~l~~lg~~~~~~~~~~~~~~~d~d~~~~i~~~ef~~~~~~~~~~~~~ 82 (176)
T 2lhi_A 3 SNLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLALMSRQLKSNDS 82 (176)
T ss_dssp CCCCTTGGGHHHHHHHTTCSSCSSCBCHHHHHHHHHHHTCCCCHHHHHHHHTTTCSSCSSSBCTTHHHHHHTSSCCSSHH
T ss_pred CcCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHcCCChhHHHHHHHHHHhCcCCCccchHHHHHHHHHHhcccCCc
Confidence 4678889999999999999999999999999999999999999999999999987543 355554322 2235
Q ss_pred HHHHHHHhhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhh
Q 042823 389 KQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDI 455 (477)
Q Consensus 389 ~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~ 455 (477)
.++++.+|+.||+|++|+|+.+||+.+|..+|..+++++++++++.+| |+||.|+|+||+.+|.+-
T Consensus 83 ~~~l~~aF~~fD~d~~G~I~~~el~~~l~~~g~~~~~~ei~~l~~~~d-d~dG~I~~~EF~~~m~k~ 148 (176)
T 2lhi_A 83 EQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDDMLREVS-DGSGEINIQQFAALLSKG 148 (176)
T ss_dssp HHHHHHHHHHHCSSCSSSBCHHHHHHHHHTTTCCCCHHHHHHHHHHHH-TTSSCBCTTHHHHHHTCC
T ss_pred HHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCcccchHHHHHHHHhhc-CCCCeEeHHHHHHHHHhc
Confidence 678999999999999999999999999999999999999999999999 999999999999999753
|
| >2lmt_A Calmodulin-related protein 97A; spermatogenesis, metal binding protein; NMR {Drosophila melanogaster} PDB: 2lmu_A 2lmv_A | Back alignment and structure |
|---|
Probab=99.87 E-value=6.5e-22 Score=167.76 Aligned_cols=136 Identities=24% Similarity=0.498 Sum_probs=121.0
Q ss_pred cCCchhhHHHHHHhhhcCCCCCCCccHHHHHHHHHhhCCCCCHHHHHHHHHHhhccc----hHHHHHhcC----C-hHHH
Q 042823 319 YLPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNSS----TLESLCENL----P-TKEK 389 (477)
Q Consensus 319 ~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~----~~~~~~~~~----~-~~~~ 389 (477)
.++++++..++++|..+|.|++|.|+.+||..+++.+|..+++.++..++..+|.++ ++.++...+ . ....
T Consensus 3 ~lt~eqi~el~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~ 82 (148)
T 2lmt_A 3 ELTEEQIAEFKDAFVQFDKEGTGKIATRELGTLMRTLGQNPTEAELQDLIAEAENNNNGQLNFTEFCGIMAKQMRETDTE 82 (148)
T ss_dssp SCCSHHHHHHHHHHHHHHCSSCCEEEGGGHHHHHHHHTCCCCHHHHHHHHHHHHTTSTTEEEHHHHHHHHHHTTTTTTTH
T ss_pred CCCHHHHHHHHHHHHHHcCCCCCeECHHHHHHHHHhcCCCchHHHHHHHHHhcccCCCCcccHHHHHHHHHHHhcccCcH
Confidence 467888999999999999999999999999999999999999999999999997543 355554322 1 2235
Q ss_pred HHHHHHhhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHh
Q 042823 390 QKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTD 454 (477)
Q Consensus 390 ~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~ 454 (477)
+.++.+|+.||+|++|+|+.+||+.+|..+|..+++++++.+++.+|.|+||.|+|+||+.+|.+
T Consensus 83 ~~l~~aF~~~D~d~~G~I~~~El~~~l~~~g~~~~~~e~~~l~~~~D~d~dG~I~~~EF~~~m~~ 147 (148)
T 2lmt_A 83 EEMREAFKIFDRDGDGFISPAELRFVMINLGEKVTDEEIDEMIREADFDGDGMINYEEFVWMISQ 147 (148)
T ss_dssp HHHHHHHHHHHSSCSSEECHHHHHHHHHHHTCCCCHHHHHHHHHHHCCSCCSSEEHHHHHHHHTT
T ss_pred HHHHHHHHHHCCCCcCcCcHHHHHHHHHHcCccccHHHHHHHHHHhCCCCCCeEeHHHHHHHHhc
Confidence 67999999999999999999999999999999999999999999999999999999999999864
|
| >3k21_A PFCDPK3, calcium-dependent protein kinase 3; calcium kinase structural genomics malaria, structural genom consortium, SGC, ATP-binding; 1.15A {Plasmodium falciparum} PDB: 3o4y_A | Back alignment and structure |
|---|
Probab=99.87 E-value=2.4e-21 Score=171.69 Aligned_cols=174 Identities=23% Similarity=0.383 Sum_probs=143.1
Q ss_pred cCcccCcCCCCC--CchHHHHHHHHHhhhhHHHHhhhhhhhccCCchhhHHHHHHhhhcCCCCCCCccHHHHHHHHHhhC
Q 042823 279 EHPWLRESGEAS--DDTSVILRMKQFRRMNKLKKLTIKVIVEYLPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVG 356 (477)
Q Consensus 279 ~h~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~ 356 (477)
.|||+-...... .....+.++++|...+++++..+..+...++.++...+++.|..+|.+++|.|+.+||..+++.+|
T Consensus 3 ~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~l~~~~l~~~~~~l~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~g 82 (191)
T 3k21_A 3 HHHHHSSGRENLYFQGIHVLENFKNYGLLLKFQKLAMTIIAQQSNDYDVEKLKSTFLVLDEDGKGYITKEQLKKGLEKDG 82 (191)
T ss_dssp -----------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHTT
T ss_pred CCccccCCccccccccHHHHHHHHHHHhhHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHcC
Confidence 477765544333 355688899999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHhhccc----hHHHHHhcCCh---HHHHHHHHHhhhhcCCCCCCcCHHHHHHHHHH--cCCCCCHH-
Q 042823 357 SMLTEFDVKHLMEAVKNSS----TLESLCENLPT---KEKQKLMEKFREMDTDNSDTLTLSELKAGLAK--LGSALEES- 426 (477)
Q Consensus 357 ~~~~~~~~~~~~~~~d~~~----~~~~~~~~~~~---~~~~~l~~~F~~~D~~~~G~I~~~el~~~l~~--~g~~~~~~- 426 (477)
..++ .++..++..+|.++ ++.+|+..+.. ...+.++.+|+.+|.|++|+|+.+||+.++.. .|..++++
T Consensus 83 ~~~~-~~~~~l~~~~D~d~~g~i~~~EF~~~~~~~~~~~~~~l~~~F~~~D~d~~G~Is~~El~~~l~~~~~~~~l~~~~ 161 (191)
T 3k21_A 83 LKLP-YNFDLLLDQIDSDGSGKIDYTEFIAAALDRKQLSKKLIYCAFRVFDVDNDGEITTAELAHILYNGNKKGNITQRD 161 (191)
T ss_dssp CCCC-TTHHHHHHHHCTTCSSSEEHHHHHHHHSCGGGCCHHHHHHHHHHHSTTCSSCBCHHHHHHHHHHSSSCSCCCHHH
T ss_pred CCcH-HHHHHHHHHhCCCCCCeEeHHHHHHHHHhhhhccHHHHHHHHHHhCCCCCCcCCHHHHHHHHHhcCCCCCCCHhH
Confidence 9888 88999999997543 47777654322 23568999999999999999999999999988 56677763
Q ss_pred --HHHHHHHHhcCCCCCcccHHHHHHHHH
Q 042823 427 --EVNQYMEAGDIDGNGNIDSIEFVNLMT 453 (477)
Q Consensus 427 --~i~~~~~~~d~~~~g~i~~~eF~~~~~ 453 (477)
++..+++.+|.|+||.|+|+||+.+|.
T Consensus 162 ~~~~~~~~~~~D~d~dG~Is~~EF~~~~~ 190 (191)
T 3k21_A 162 VNRVKRMIRDVDKNNDGKIDFHEFSEMMK 190 (191)
T ss_dssp HHHHHHHHHHHCSSSSSSBCHHHHHHHHC
T ss_pred HHHHHHHHHHhcCCCCCeECHHHHHHHHc
Confidence 689999999999999999999999874
|
| >1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=3.1e-22 Score=186.08 Aligned_cols=140 Identities=16% Similarity=0.140 Sum_probs=106.5
Q ss_pred ccccccccccCCeEEEEEEEccCCce--EEEEEeecCCcc---------------------chhhHHHHHHHHHHHHhcc
Q 042823 25 YFFGRMLGRGQFGVSYLCTENSTNRP--YACKSIAKKPKM---------------------RLAENDMIRREIQIRLYLS 81 (477)
Q Consensus 25 Y~~~~~iG~G~~g~V~~~~~~~~~~~--~aiK~~~~~~~~---------------------~~~~~~~~~~e~~~~~~l~ 81 (477)
|.+.+.||+|+||.||+|.+..+|+. ||||++...... .......+.+|+.++..+
T Consensus 49 ~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l- 127 (258)
T 1zth_A 49 TAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERA- 127 (258)
T ss_dssp EEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHH-
T ss_pred hhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHH-
Confidence 77889999999999999998778999 999987543110 001123678899999998
Q ss_pred CCCC--eeEEEEEEEeCCeEEEEEeccCC-C----chHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH-HcCCeeccCCCC
Q 042823 82 GQPN--VVEFKSTYEDETAVHVVMELCEG-G----DLFDRIIAKGYNSERDAATVLRAIVNAVNVCH-SMGVMHRDLKPE 153 (477)
Q Consensus 82 ~hpn--iv~~~~~~~~~~~~~lv~e~~~g-g----~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH-~~~ivH~dlkp~ 153 (477)
.|++ ++.+++. ...++||||+.+ | +|.+.... .++..+..++.|++.||.||| ++||+||||||+
T Consensus 128 ~~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~---~~~~~~~~i~~qi~~~l~~lH~~~givHrDlkp~ 200 (258)
T 1zth_A 128 KEAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE---LKELDVEGIFNDVVENVKRLYQEAELVHADLSEY 200 (258)
T ss_dssp HHTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG---GGGSCHHHHHHHHHHHHHHHHHTSCEECSSCSTT
T ss_pred HhCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc---cChHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHH
Confidence 4664 3444432 256899999942 3 66555322 235567899999999999999 999999999999
Q ss_pred ceeeeecCCCCCEEEeecCCcccc
Q 042823 154 NFSFISRDDNALLKVTDFGSALLF 177 (477)
Q Consensus 154 Nil~~~~~~~~~~kl~Dfg~a~~~ 177 (477)
|||+ +. .++|+|||+|...
T Consensus 201 NILl---~~--~~~liDFG~a~~~ 219 (258)
T 1zth_A 201 NIMY---ID--KVYFIDMGQAVTL 219 (258)
T ss_dssp SEEE---SS--SEEECCCTTCEET
T ss_pred HEEE---cC--cEEEEECcccccC
Confidence 9999 44 8999999999764
|
| >3sjs_A URE3-BP sequence specific DNA binding protein; EF-hand, structural genomics, seattle S genomics center for infectious disease, ssgcid; 1.90A {Entamoeba histolytica} PDB: 3sia_A 3sib_A | Back alignment and structure |
|---|
Probab=99.86 E-value=2.7e-21 Score=175.20 Aligned_cols=168 Identities=15% Similarity=0.129 Sum_probs=145.6
Q ss_pred HHhhhhHHHHhhhhhhhccCCchhhHHHHHHhhhcCCCCCCCccHHHHHHHHHhhCCCCCHHHHHHHHHHhhcc----ch
Q 042823 301 QFRRMNKLKKLTIKVIVEYLPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNS----ST 376 (477)
Q Consensus 301 ~~~~~~~l~~~~~~~i~~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~----~~ 376 (477)
.+.....+++.....+...++.++...+++.|..+|.+++|.|+.+||..+++.+|..++..++..+++.+|.+ .+
T Consensus 26 ~~~~~~~~~~~~~~~~~~~l~~~e~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~l~~~~D~d~dg~I~ 105 (220)
T 3sjs_A 26 IYQMPPSVRNTWWFPLLNTIPLDQYTRIYQWFMGVDRDRSGTLEINELMMGQFPGGIRLSPQTALRMMRIFDTDFNGHIS 105 (220)
T ss_dssp HHHSCHHHHTSTTGGGGGGCCHHHHHHHHHHHHHHCTTCCSSBCHHHHHHCCBGGGBCCCHHHHHHHHHHHCTTCSSCBC
T ss_pred ccCCChhHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCcCC
Confidence 34444556666666677788999999999999999999999999999999999999999999999999999754 35
Q ss_pred HHHHHhcCChHHHHHHHHHhhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhhh
Q 042823 377 LESLCENLPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIY 456 (477)
Q Consensus 377 ~~~~~~~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~~ 456 (477)
+.+|...+.. .+.++.+|+.+|+|++|+|+.+||+.+++.+|..+++++++.+++.+| |+||.|+|+||+.++....
T Consensus 106 ~~EF~~~~~~--~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~l~~~~d-d~dg~I~~~eF~~~~~~l~ 182 (220)
T 3sjs_A 106 FYEFMAMYKF--MELAYNLFVMNARARSGTLEPHEILPALQQLGFYINQRTSLLLHRLFA-RGMAFCDLNCWIAICAFAA 182 (220)
T ss_dssp HHHHHHHHHH--HHHHHHHHHHHCCSSTTEECHHHHHHHHHHHTCCCCHHHHHHHHHHHC---CCSEEHHHHHHHHHHHH
T ss_pred HHHHHHHHHH--HHHHHHHHHHHCCCCCCCCcHHHHHHHHHHhCCCCCHHHHHHHHHHhc-CCCCcCcHHHHHHHHHHHH
Confidence 7777765433 367999999999999999999999999999999999999999999999 9999999999999997653
Q ss_pred CCCcHHHHHHHHHHh-ccCCCC
Q 042823 457 KLETPELLEKAFQYL-DKNSDQ 477 (477)
Q Consensus 457 ~~~~~~~l~~aF~~~-D~d~~G 477 (477)
.++.+|+.+ |++++|
T Consensus 183 ------~~~~~F~~~~D~~~~G 198 (220)
T 3sjs_A 183 ------QTRSAYQMIFMNPYYG 198 (220)
T ss_dssp ------HHHHHHHHHHTSGGGC
T ss_pred ------HHHHHHHHhcccCCCC
Confidence 689999999 999987
|
| >1ij5_A Plasmodial specific LAV1-2 protein; fourty kDa calcium binding protein, CBP40, metal binding protein; 3.00A {Physarum polycephalum} SCOP: a.39.1.9 PDB: 1ij6_A | Back alignment and structure |
|---|
Probab=99.85 E-value=7.1e-22 Score=189.08 Aligned_cols=212 Identities=19% Similarity=0.327 Sum_probs=162.2
Q ss_pred CCCHHHHHHHHHhc---ccCccccCCHHHHhcC------cccCcCCCCC-------------------C-------chHH
Q 042823 251 SISSTAKDLVRRML---TKDPKRRITAAQVLEH------PWLRESGEAS-------------------D-------DTSV 295 (477)
Q Consensus 251 ~~~~~~~~li~~~l---~~dp~~R~s~~~~l~h------~~~~~~~~~~-------------------~-------~~~~ 295 (477)
.+++++.+|.+++. ..+|+.|.+.++.+.| +|+....+.. . ....
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~a~g~~~~e~q~~~~v 95 (323)
T 1ij5_A 16 KVHENLEELQKKLDHTSFAHKEDRDRLEAQIAQKEQEQKAKLAEYDQKVQNEFDARERAEREREAARGDAAAEKQRLASL 95 (323)
T ss_dssp HHHHHHHHHHHHHTTCCCC-----CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhhhhHHHHHHHHhhcCCCCCcchhhHHH
Confidence 45678889999998 8899999999999888 8876541110 0 0111
Q ss_pred HHHHH-HHhhhhHHHHhhhhhhhccCCchhhHHHHHHhhhcCCCCCCCccHHHHHHHHHhhCCCCCHHHHHHHHHHhhcc
Q 042823 296 ILRMK-QFRRMNKLKKLTIKVIVEYLPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNS 374 (477)
Q Consensus 296 ~~~~~-~~~~~~~l~~~~~~~i~~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~ 374 (477)
+.+++ +|...+.+++ +...++.++...+...|..+|.+++|.|+..||..+|+.+|..++..++..++..+|.+
T Consensus 96 l~~l~~~f~~~~~lkk-----~~~~Ls~~e~~~l~~~F~~~D~d~dG~Is~~El~~~L~~lg~~~~~~~i~~l~~~~D~d 170 (323)
T 1ij5_A 96 LKDLEDDASGYNRLRP-----SKPMLSEEDTNILRQLFLSSAVSGSGKFSFQDLKQVLAKYADTIPEGPLKKLFVMVEND 170 (323)
T ss_dssp HHHC------------------CCCCCHHHHHHHHHHHTSSSSTTSSCCCHHHHHHHHHHHHTTSCSSHHHHHHHHHHHC
T ss_pred HHHHHHHHHHhhhHHH-----HHHhCCHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHcCCCCCHHHHHHHHHHhcCC
Confidence 22222 3333444433 34567888899999999999999999999999999999999999999999999999754
Q ss_pred c----hHHHHHhcCChHHHHHHHHHhhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHH-HHHHhcCCCCCcccHHHHH
Q 042823 375 S----TLESLCENLPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQ-YMEAGDIDGNGNIDSIEFV 449 (477)
Q Consensus 375 ~----~~~~~~~~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~-~~~~~d~~~~g~i~~~eF~ 449 (477)
+ ++.+|+.. ......++.+|..||.|++|+|+.+||..+| +|..++..++.. ++..+|.+++|.|+|+||+
T Consensus 171 ~~G~I~f~ef~~l--~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l--~g~~~~~~ei~~~l~~~~D~d~dG~Is~~EF~ 246 (323)
T 1ij5_A 171 TKGRMSYITLVAV--ANDLAALVADFRKIDTNSNGTLSRKEFREHF--VRLGFDKKSVQDALFRYADEDESDDVGFSEYV 246 (323)
T ss_dssp CSSTHHHHHHTTS--HHHHHTSCCCHHHHCTTCCSEECHHHHHHHH--HHTTCCCHHHHHHHHHHHCTTCSSCEEHHHHH
T ss_pred CCCcCcHHHHHhh--hhHHHHHHHHHHHHCCCCCCcCcHHHHHHHH--cCCCCCHHHHHHHHHHHhcCCCCCEEeHHHHH
Confidence 2 35555442 3556778899999999999999999999999 888999999999 9999999999999999999
Q ss_pred HHHHhhhCCCcHHHHHHHHHHhccCCCC
Q 042823 450 NLMTDIYKLETPELLEKAFQYLDKNSDQ 477 (477)
Q Consensus 450 ~~~~~~~~~~~~~~l~~aF~~~D~d~~G 477 (477)
.++.... .+..+|+.||+|++|
T Consensus 247 ~~l~~~~------~l~~~F~~~D~d~dG 268 (323)
T 1ij5_A 247 HLGLCLL------VLRILYAFADFDKSG 268 (323)
T ss_dssp HHHHHHH------HHHHHHHHTCSSSCS
T ss_pred HHHHHHH------HHHHHHHHhCCCCCC
Confidence 9997654 799999999999998
|
| >2znd_A Programmed cell death protein 6; penta-EF-hand protein, calcium binding protein, apoptosis, calcium, endoplasmic reticulum, membrane, nucleus; 1.70A {Homo sapiens} PDB: 2zn9_A 2zn8_A 1hqv_A 3aak_A 2zne_A 2zrs_A 2zrt_A 3aaj_A | Back alignment and structure |
|---|
Probab=99.85 E-value=6.4e-21 Score=165.91 Aligned_cols=147 Identities=21% Similarity=0.314 Sum_probs=131.1
Q ss_pred hhhHHHHHHhhhcCCCCCCCccHHHHHHHHHhhC-CCCCHHHHHHHHHHhhccc----hHHHHHhcCChHHHHHHHHHhh
Q 042823 323 EETQALKEKFIEMDTDKNGTLSYDELRAGLTKVG-SMLTEFDVKHLMEAVKNSS----TLESLCENLPTKEKQKLMEKFR 397 (477)
Q Consensus 323 ~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~-~~~~~~~~~~~~~~~d~~~----~~~~~~~~~~~~~~~~l~~~F~ 397 (477)
.....++++|..+|.+++|.|+.+||..+++.+| ..++..++..+++.+|.++ ++.+|...+. ....++.+|+
T Consensus 4 ~~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~ef~~~~~--~~~~~~~~F~ 81 (172)
T 2znd_A 4 PDQSFLWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTGVWK--YITDWQNVFR 81 (172)
T ss_dssp --CHHHHHHHHHHCTTCSSCEEHHHHHHHCCCSSSSCCCHHHHHHHHHHHCSSSSSEECHHHHHHHHH--HHHHHHHHHH
T ss_pred cchhHHHHHHHHhCCCCCCcCcHHHHHHHHHhcCCCCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHH--HHHHHHHHHH
Confidence 3456789999999999999999999999999998 6789999999999998543 4777766543 3568999999
Q ss_pred hhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhhhCCCcHHHHHHHHHHhccCCCC
Q 042823 398 EMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIYKLETPELLEKAFQYLDKNSDQ 477 (477)
Q Consensus 398 ~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~l~~aF~~~D~d~~G 477 (477)
.+|.|++|.|+.+||+.++..+|..+++++++.+++.+|.+++|.|+|+||+.++... +.+..+|+.+|+|++|
T Consensus 82 ~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~------~~~~~~F~~~D~d~dG 155 (172)
T 2znd_A 82 TYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDFIQGCIVL------QRLTDIFRRYDTDQDG 155 (172)
T ss_dssp HHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHH------HHHHHHHHHHCTTSSS
T ss_pred HHCCCCCCccCHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH------HHHHHHHHHhCCCCCC
Confidence 9999999999999999999999999999999999999999999999999999998754 5799999999999998
|
| >1alv_A Calpain, S-camld; calcium binding, calmodulin like, domain of cystein protease; 1.90A {Sus scrofa} SCOP: a.39.1.8 PDB: 1alw_A* 1nx0_A 1nx1_A 1nx2_A 1nx3_A* 1kfu_S 1kfx_S 3bow_B 1u5i_B 1df0_B 3df0_B 1aj5_A 1dvi_A 1np8_A | Back alignment and structure |
|---|
Probab=99.85 E-value=8.5e-21 Score=165.30 Aligned_cols=144 Identities=21% Similarity=0.288 Sum_probs=129.4
Q ss_pred hhHHHHHHhhhcCCCCCCCccHHHHHHHHHhh-C-------CCCCHHHHHHHHHHhhcc----chHHHHHhcCChHHHHH
Q 042823 324 ETQALKEKFIEMDTDKNGTLSYDELRAGLTKV-G-------SMLTEFDVKHLMEAVKNS----STLESLCENLPTKEKQK 391 (477)
Q Consensus 324 ~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~-~-------~~~~~~~~~~~~~~~d~~----~~~~~~~~~~~~~~~~~ 391 (477)
+...++++|..+| +++|.|+.+||..+++.+ | ..++..++..+++.+|.+ .++.+|+..+. ....
T Consensus 2 ~~~~l~~~F~~~D-d~~G~i~~~el~~~l~~~~g~~~~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~eF~~~~~--~~~~ 78 (173)
T 1alv_A 2 EVRQFRRLFAQLA-GDDMEVSATELMNILNKVVTRHPDLKTDGFGIDTCRSMVAVMDSDTTGKLGFEEFKYLWN--NIKK 78 (173)
T ss_dssp HHHHHHHHHHHHH-GGGTSBCHHHHHHHHHHHHHTCSTTCCSCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHH--HHHH
T ss_pred chhHHHHHHHHHh-CCCCCcCHHHHHHHHHHhhhcccccccCCCCHHHHHHHHHHHcCCCCCccCHHHHHHHHH--HHHH
Confidence 4678899999999 999999999999999998 6 678899999999999854 35777766543 3568
Q ss_pred HHHHhhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhhhCCCcHHHHHHHHHHh
Q 042823 392 LMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIYKLETPELLEKAFQYL 471 (477)
Q Consensus 392 l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~l~~aF~~~ 471 (477)
++.+|+.+|.|++|.|+.+||+.+++.+|..+++++++.+++.+| +++|.|+|+||+.++... +.+..+|+.|
T Consensus 79 ~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~d-d~dg~i~~~eF~~~~~~~------~~~~~~F~~~ 151 (173)
T 1alv_A 79 WQAIYKQFDVDRSGTIGSSELPGAFEAAGFHLNEHLYSMIIRRYS-DEGGNMDFDNFISCLVRL------DAMFRAFKSL 151 (173)
T ss_dssp HHHHHHHHCTTCCSSBCTTTHHHHHHHHTCCCCHHHHHHHHHHHT-CSSSCBCHHHHHHHHHHH------HHHHHHHHHH
T ss_pred HHHHHHHHCCCCCCCCCHHHHHHHHHHcCCCCCHHHHHHHHHHhc-CCCCcCcHHHHHHHHHHH------HHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999 999999999999999753 5899999999
Q ss_pred ccCCCC
Q 042823 472 DKNSDQ 477 (477)
Q Consensus 472 D~d~~G 477 (477)
|+|++|
T Consensus 152 D~d~~G 157 (173)
T 1alv_A 152 DKDGTG 157 (173)
T ss_dssp SSSCCS
T ss_pred CCCCCC
Confidence 999998
|
| >2obh_A Centrin-2; DNA repair complex EF hand superfamily protein-peptide compl cycle; 1.80A {Homo sapiens} SCOP: a.39.1.5 PDB: 3kf9_A 1m39_A 2a4j_A 2k2i_A 1oqp_A | Back alignment and structure |
|---|
Probab=99.84 E-value=1.2e-20 Score=158.89 Aligned_cols=132 Identities=22% Similarity=0.499 Sum_probs=118.0
Q ss_pred chhhHHHHHHhhhcCCCCCCCccHHHHHHHHHhhCCCCCHHHHHHHHHHhhccc----hHHHHHhcCCh-----HHHHHH
Q 042823 322 DEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNSS----TLESLCENLPT-----KEKQKL 392 (477)
Q Consensus 322 ~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~----~~~~~~~~~~~-----~~~~~l 392 (477)
+++...++++|..+|.|++|.|+.+||..+++.+|..+++.++..+++.+|.++ ++.+|+..+.. ...+.+
T Consensus 2 ~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~l 81 (143)
T 2obh_A 2 EEQKQEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNFGDFLTVMTQKMSEKDTKEEI 81 (143)
T ss_dssp HHHHHHHHHHHHTTCTTCCSEEEGGGHHHHHHHTTCCCCHHHHHHHHHHHTTTCCSEEEHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeeeHHHHHHHHHHHhccccHHHHH
Confidence 456778999999999999999999999999999999999999999999998543 57777654432 235689
Q ss_pred HHHhhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHH
Q 042823 393 MEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMT 453 (477)
Q Consensus 393 ~~~F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~ 453 (477)
+.+|+.||+|++|+|+.+||+.++..+|..+++++++.+++.+|.|+||.|+|+||+.+|.
T Consensus 82 ~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~D~d~dG~I~~~eF~~~~~ 142 (143)
T 2obh_A 82 LKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVSEQEFLRIMK 142 (143)
T ss_dssp HHHHHHHCTTCSSSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTSSSSBCHHHHHHHHC
T ss_pred HHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHc
Confidence 9999999999999999999999999999999999999999999999999999999999874
|
| >3u0k_A Rcamp; fluorescent protein, calcium binding, EF-hand, genetically E calcium indicator; HET: NFA CRK; 2.10A {Entacmaea quadricolor} | Back alignment and structure |
|---|
Probab=99.84 E-value=8.5e-21 Score=181.34 Aligned_cols=138 Identities=28% Similarity=0.507 Sum_probs=123.3
Q ss_pred hccCCchhhHHHHHHhhhcCCCCCCCccHHHHHHHHHhhCCCCCHHHHHHHHHHhhccc----hHHHHHhcCC-----hH
Q 042823 317 VEYLPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNSS----TLESLCENLP-----TK 387 (477)
Q Consensus 317 ~~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~----~~~~~~~~~~-----~~ 387 (477)
...++++++.+++++|..+|.|++|.|+.+||..+|+.+|..+++.++..+++.+|.++ +|.+|+..+. ..
T Consensus 293 ~E~Lt~EEI~ELREaF~~fDkDgdG~IS~eELk~aLrsLG~~~TeeEI~~Lf~~~D~DgDG~IdFeEFl~lms~~lk~~d 372 (440)
T 3u0k_A 293 RDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLIMMARKMKDTD 372 (440)
T ss_dssp CBCCCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCSSCSSSEEHHHHHHHHHTC-----
T ss_pred HhhhhHHHHHHHHHHHHHHcCCCCCEECHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhcCCC
Confidence 46778999999999999999999999999999999999999999999999999998543 5777765431 12
Q ss_pred HHHHHHHHhhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHh
Q 042823 388 EKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTD 454 (477)
Q Consensus 388 ~~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~ 454 (477)
..++++++|+.||+|++|+|+.+||+.+|..+|..+++++++++++.+|.|+||.|+|+||+.+|..
T Consensus 373 ~eeeLreAFk~fDkDgdG~IS~eELr~vL~~lGe~LSdeEIdeLfke~D~DgDGkIsyeEFvkmMtS 439 (440)
T 3u0k_A 373 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 439 (440)
T ss_dssp -CHHHHHHHHHHCTTCSSEECHHHHHHHHHHHTCCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHC-
T ss_pred hHHHHHHHHHHHCCCCcCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHhCC
Confidence 3468999999999999999999999999999999999999999999999999999999999999853
|
| >1y1x_A Leishmania major homolog of programmed cell death protein; SGPP, structural genomics, PSI; 1.95A {Leishmania major} SCOP: a.39.1.8 | Back alignment and structure |
|---|
Probab=99.84 E-value=2.5e-20 Score=165.10 Aligned_cols=145 Identities=23% Similarity=0.320 Sum_probs=130.8
Q ss_pred hHHHHHHhhhcCCCCCCCccHHHHHHHHHhhCCCCCHHHHHHHHHHhhcc----chHHHHHhcCChHHHHHHHHHhhhhc
Q 042823 325 TQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNS----STLESLCENLPTKEKQKLMEKFREMD 400 (477)
Q Consensus 325 ~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~----~~~~~~~~~~~~~~~~~l~~~F~~~D 400 (477)
...++++|..+|.+++|.|+.+||..++..+|..+++.++..+++.+|.+ .++.+|...+. ....++.+|+.+|
T Consensus 26 ~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~~l~~~~D~d~dG~I~~~EF~~~~~--~~~~~~~~F~~~D 103 (191)
T 1y1x_A 26 NQELMEWFRAVDTDGSGAISVPELNAALSSAGVPFSLATTEKLLHMYDKNHSGEITFDEFKDLHH--FILSMREGFRKRD 103 (191)
T ss_dssp TSCHHHHHHHHCTTCSSSBCHHHHHHHHCBTTBCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHH--HHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHcCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHH--HHHHHHHHHHHhC
Confidence 45688999999999999999999999998888889999999999999854 35777776543 2468899999999
Q ss_pred CCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhhhCCCcHHHHHHHHHHhccCCCC
Q 042823 401 TDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIYKLETPELLEKAFQYLDKNSDQ 477 (477)
Q Consensus 401 ~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~l~~aF~~~D~d~~G 477 (477)
.|++|.|+.+||+.++..+|..+++++++.+++.+|.|++|.|+|+||+.++... +.+..+|+.+|+|++|
T Consensus 104 ~d~~G~i~~~e~~~~l~~~g~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~------~~~~~~F~~~D~d~dG 174 (191)
T 1y1x_A 104 SSGDGRLDSNEVRAALLSSGYQVSEQTFQALMRKFDRQRRGSLGFDDYVELSIFV------CRVRNVFAFYDRERTG 174 (191)
T ss_dssp TTSSSCBCHHHHHHHHHTTSCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHH------HHHHHHHHHHCTTCCS
T ss_pred CCCCCeEcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHHH------HHHHHHHHHhCcCCCc
Confidence 9999999999999999999999999999999999999999999999999999753 5799999999999998
|
| >2i7a_A Calpain 13; calcium-dependent cytoplasmic cysteine proteinases, like, EF-hand, structural genomics, structural genomics CON SGC, hydrolase; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.84 E-value=1.6e-20 Score=163.16 Aligned_cols=134 Identities=14% Similarity=0.194 Sum_probs=118.2
Q ss_pred hcCCCCCCCccHHHHHHHHHhh------CCCCCHHHHHHHHHHhhcc----chHHHHHhcCChHHHHHHHHHhhhhcCCC
Q 042823 334 EMDTDKNGTLSYDELRAGLTKV------GSMLTEFDVKHLMEAVKNS----STLESLCENLPTKEKQKLMEKFREMDTDN 403 (477)
Q Consensus 334 ~~D~~~~G~i~~~el~~~l~~~------~~~~~~~~~~~~~~~~d~~----~~~~~~~~~~~~~~~~~l~~~F~~~D~~~ 403 (477)
.-+.+++|+|+.+||+.+|+.+ |..++..++..+++.+|.+ .++.+|...+. ...+++.+|+.|| |+
T Consensus 12 ~~~~~~dG~I~~~EL~~~l~~l~~~~~~g~~~~~~~~~~l~~~~D~d~~G~I~f~EF~~~~~--~~~~l~~aF~~fD-d~ 88 (174)
T 2i7a_A 12 SGLVPRGSDIDATQLQGLLNQELLTGPPGDMFSLDECRSLVALMELKVNGRLDQEEFARLWK--RLVHYQHVFQKVQ-TS 88 (174)
T ss_dssp CCSCC-CCCEEHHHHHHHHHHHHC-----CCCCHHHHHHHHHHHCSSCSSEECHHHHHHHHH--HHHHHHHHHHHHC-SB
T ss_pred cccCCCCCcCCHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHCCCCCCcCCHHHHHHHHH--HHHHHHHHHHHhc-CC
Confidence 4578999999999999999998 6688999999999999854 35777776543 3468999999999 99
Q ss_pred CCCcCHHHHHHHHHHc----CCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhhhCCCcHHHHHHHHHHhccCCCC
Q 042823 404 SDTLTLSELKAGLAKL----GSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIYKLETPELLEKAFQYLDKNSDQ 477 (477)
Q Consensus 404 ~G~I~~~el~~~l~~~----g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~l~~aF~~~D~d~~G 477 (477)
+|+|+.+||+.+|+.+ |..+++++++.+++.+| +++|.|+|+||+.++... +.+.++|+.||+|++|
T Consensus 89 ~G~I~~~El~~~l~~l~~~~G~~~~~~~~~~l~~~~d-d~dG~I~~~EF~~~~~~~------~~~~~~F~~~D~d~~G 159 (174)
T 2i7a_A 89 PGVLLSSDLWKAIENTDFLRGIFISRELLHLVTLRYS-DSVGRVSFPSLVCFLMRL------EAMAKTFRNLSKDGKG 159 (174)
T ss_dssp TTBEEGGGHHHHHHTCGGGTTCCCCHHHHHHHHHHHS-CTTSEECHHHHHHHHHHH------HHHHHHHHHHCSSSSC
T ss_pred CCcCCHHHHHHHHHHhHhccCCCCCHHHHHHHHHHHc-CCCCeEcHHHHHHHHHHH------HHHHHHHHHhCCCCCC
Confidence 9999999999999999 99999999999999999 999999999999998753 4799999999999998
|
| >3i5g_C Myosin catalytic light chain LC-1, mantle muscle; rigor-like, squid, muscle myosin, contractIle protein; 2.60A {Todarodes pacificus} PDB: 3i5f_C 3i5h_C 3i5i_C | Back alignment and structure |
|---|
Probab=99.84 E-value=5.9e-21 Score=163.55 Aligned_cols=136 Identities=22% Similarity=0.316 Sum_probs=116.7
Q ss_pred cCCchhhHHHHHHhhhcCC--CCCCCccHHHHHHHHHhhCCCCCHHHHHHHHHHhhc---cchHHHHHhcC-------Ch
Q 042823 319 YLPDEETQALKEKFIEMDT--DKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKN---SSTLESLCENL-------PT 386 (477)
Q Consensus 319 ~~~~~~~~~l~~~F~~~D~--~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~---~~~~~~~~~~~-------~~ 386 (477)
.++++++..++++|..+|. +++|+|+..||..+|+.+|..+++.++..++...+. ..+|.+|+..+ ..
T Consensus 2 qLt~eqi~elre~F~~fD~~~d~dG~I~~~El~~~lr~lG~~~t~~el~~~~~~d~~~~g~i~f~eFl~~~~~~~~~~~~ 81 (159)
T 3i5g_C 2 QLTKDEIEEVREVFDLFDFWDGRDGDVDAAKVGDLLRCLGMNPTEAQVHQHGGTKKMGEKAYKLEEILPIYEEMSSKDTG 81 (159)
T ss_dssp CCCHHHHHHHHHHHHHHHHHTTSSSCEEGGGHHHHHHHTTCCCCHHHHHTTTCCSSTTSCEECHHHHHHHHHHHTTCCTT
T ss_pred CCCHHHHHHHHHHHHHHCcCCCCCCeECHHHHHHHHHHcCCCCCHHHHHHHHcccccCCCcccHHHHHHHHHHhhccccc
Confidence 4678889999999999995 899999999999999999999999999887654321 23566665432 12
Q ss_pred HHHHHHHHHhhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcC--CCCCcccHHHHHHHHHh
Q 042823 387 KEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDI--DGNGNIDSIEFVNLMTD 454 (477)
Q Consensus 387 ~~~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~--~~~g~i~~~eF~~~~~~ 454 (477)
...+++++||+.||+|++|+|+.+||+.+|..+|.++++++++.+++.+|. |+||.|+|+||+.+|..
T Consensus 82 ~~~~~l~~aF~~fD~d~~G~I~~~el~~~l~~~g~~ls~~e~~~l~~~~D~~~d~dG~I~~~EF~~~m~~ 151 (159)
T 3i5g_C 82 TAADEFMEAFKTFDREGQGLISSAEIRNVLKMLGERITEDQCNDIFTFCDIREDIDGNIKYEDLMKKVMA 151 (159)
T ss_dssp CCHHHHHHHHHHHCTTSSSEECHHHHHHHHHHSSSCCCHHHHHHHHHHTTCCCCSSCCEEHHHHHHHHHH
T ss_pred chHHHHHHHHHHHhcCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCcCCCCCCeEeHHHHHHHHHC
Confidence 335689999999999999999999999999999999999999999999995 88999999999998864
|
| >1exr_A Calmodulin; high resolution, disorder, metal transport; 1.00A {Paramecium tetraurelia} SCOP: a.39.1.5 PDB: 1n0y_A 1osa_A 1clm_A 1mxe_A 2bbm_A 2bbn_A 4cln_A 4djc_A 2wel_D* 2x51_B 2vas_B* 2bkh_B 3gn4_B 3l9i_C 2ygg_B* 2w73_A 1lvc_D* 1wrz_A 2bki_B 2r28_A ... | Back alignment and structure |
|---|
Probab=99.82 E-value=1.6e-19 Score=152.85 Aligned_cols=136 Identities=27% Similarity=0.516 Sum_probs=120.9
Q ss_pred cCCchhhHHHHHHhhhcCCCCCCCccHHHHHHHHHhhCCCCCHHHHHHHHHHhhcc----chHHHHHhcCCh-----HHH
Q 042823 319 YLPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNS----STLESLCENLPT-----KEK 389 (477)
Q Consensus 319 ~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~----~~~~~~~~~~~~-----~~~ 389 (477)
.++.++...+++.|..+|.+++|.|+.+||..+++.+|..++..++..++..+|.+ .++.+|+..+.. ...
T Consensus 3 ~l~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~ 82 (148)
T 1exr_A 3 QLTEEQIAEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLSLMARKMKEQDSE 82 (148)
T ss_dssp CCCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHTCCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHHhcccCCCcH
Confidence 35677788899999999999999999999999999999999999999999999754 347776654422 235
Q ss_pred HHHHHHhhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHh
Q 042823 390 QKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTD 454 (477)
Q Consensus 390 ~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~ 454 (477)
+.++.+|+.||+|++|+|+.+||+.+|..+|..+++++++.+++.+|.|++|.|+|+||+.+|..
T Consensus 83 ~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~d~d~dg~i~~~eF~~~~~~ 147 (148)
T 1exr_A 83 EELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINYEEFVRMMVS 147 (148)
T ss_dssp HHHHHHHHHHSTTCSSCBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCSSSSSSBCHHHHHHHHHC
T ss_pred HHHHHHHHHhCCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHcc
Confidence 67899999999999999999999999999999999999999999999999999999999998853
|
| >2mys_B Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1i84_U* 1m8q_B* 1mvw_B* 1o18_E* 1o19_B* 1o1a_B* 1o1b_B* 1o1c_B* 1o1d_B* 1o1e_B* 1o1f_B* 1o1g_B* 2w4a_B 2w4g_B 2w4h_B | Back alignment and structure |
|---|
Probab=99.82 E-value=1e-19 Score=157.14 Aligned_cols=138 Identities=18% Similarity=0.309 Sum_probs=125.1
Q ss_pred ccCCchhhHHHHHHhhhcCCCCCCCccHHHHHHHHHhhCC-CCCHHHHHHHHHHhhccchHHHHHhcCCh-----HHHHH
Q 042823 318 EYLPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGS-MLTEFDVKHLMEAVKNSSTLESLCENLPT-----KEKQK 391 (477)
Q Consensus 318 ~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~-~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~~~~~ 391 (477)
..++.++...++.+|..+|.+++|.|+.+||..+++.+|. .++..++..++...++..++.+|+..+.. ...+.
T Consensus 17 ~~l~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~l~~~~dg~i~~~eF~~~~~~~~~~~~~~~~ 96 (166)
T 2mys_B 17 SMFDETEIEDFKEAFTVIDQNADGIIDKDDLRETFAAMGRLNVKNEELDAMIKEASGPINFTVFLTMFGEKLKGADPEDV 96 (166)
T ss_pred hhCCHHHHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHhCCCCCCHHHHHHHHHHCCCCcCHHHHHHHHHHHhccCCcHHH
Confidence 3567788889999999999999999999999999999999 99999999999998877788877765432 24578
Q ss_pred HHHHhhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhh
Q 042823 392 LMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDI 455 (477)
Q Consensus 392 l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~ 455 (477)
++.+|+.||.|++|+|+.+||+.+|..+|..+++++++.+++.+|.|+||.|+|+||+.++...
T Consensus 97 l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~D~d~dg~I~~~eF~~~~~~~ 160 (166)
T 2mys_B 97 IMGAFKVLDPDGKGSIKKSFLEELLTTGGGRFTPEEIKNMWAAFPPDVAGNVDYKNICYVITHG 160 (166)
T ss_pred HHHHHHHhCCCCCcceeHHHHHHHHHHcCCCCCHHHHHHHHHhcCCCCCCeEeHHHHHHHHHhc
Confidence 9999999999999999999999999999999999999999999999999999999999999754
|
| >1k94_A Grancalcin; penta-EF-hand protein, calcium binding protein, metal binding protein; 1.70A {Homo sapiens} SCOP: a.39.1.8 PDB: 1k95_A 1f4q_A 1f4o_A | Back alignment and structure |
|---|
Probab=99.82 E-value=1e-19 Score=157.10 Aligned_cols=138 Identities=17% Similarity=0.248 Sum_probs=123.7
Q ss_pred HHhhhcCCCCCCCccHHHHHHHHHhhCC-----CCCHHHHHHHHHHhhcc----chHHHHHhcCChHHHHHHHHHhhhhc
Q 042823 330 EKFIEMDTDKNGTLSYDELRAGLTKVGS-----MLTEFDVKHLMEAVKNS----STLESLCENLPTKEKQKLMEKFREMD 400 (477)
Q Consensus 330 ~~F~~~D~~~~G~i~~~el~~~l~~~~~-----~~~~~~~~~~~~~~d~~----~~~~~~~~~~~~~~~~~l~~~F~~~D 400 (477)
..|..+|.+++|.|+.+||..+++.+|. .++..++..+++.+|.+ .++.+|...+. ..+.++.+|+.+|
T Consensus 3 ~~F~~~D~d~~G~i~~~el~~~l~~lg~~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~eF~~~~~--~~~~~~~~F~~~D 80 (165)
T 1k94_A 3 YTYFSAVAGQDGEVDAEELQRCLTQSGINGTYSPFSLETCRIMIAMLDRDHTGKMGFNAFKELWA--ALNAWKENFMTVD 80 (165)
T ss_dssp HHHHHHHHGGGTSBCHHHHHHHHHHHTTTTTSCCCCHHHHHHHHHHHCTTCSSCBCHHHHHHHHH--HHHHHHHHHHHHC
T ss_pred HHHHHHhCCCCCcCCHHHHHHHHHHhccccCCCCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHH--HHHHHHHHHHHhC
Confidence 4588999999999999999999999987 67899999999999754 35777766443 2468999999999
Q ss_pred CCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhhhCCCcHHHHHHHHHHhccCCCC
Q 042823 401 TDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIYKLETPELLEKAFQYLDKNSDQ 477 (477)
Q Consensus 401 ~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~l~~aF~~~D~d~~G 477 (477)
.|++|.|+.+||+.+++.+|..+++++++.+++.+ +++|.|+|+||+.++... +++..+|+.+|+|++|
T Consensus 81 ~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~--d~dg~i~~~eF~~~~~~~------~~~~~~F~~~D~d~~G 149 (165)
T 1k94_A 81 QDGSGTVEHHELRQAIGLMGYRLSPQTLTTIVKRY--SKNGRIFFDDYVACCVKL------RALTDFFRKRDHLQQG 149 (165)
T ss_dssp TTCCSBCCHHHHHHHHHHTTCCCCHHHHHHHHHHH--CBTTBCBHHHHHHHHHHH------HHHHHHHHTTCTTCCS
T ss_pred CCCCceECHHHHHHHHHHhCCCCCHHHHHHHHHHh--CCCCeEcHHHHHHHHHHH------HHHHHHHHHhCCCCCC
Confidence 99999999999999999999999999999999999 889999999999999764 5899999999999998
|
| >1gjy_A Sorcin, CP-22, V19; calcium binding, calcium-binding, phosphorylation; 2.2A {Chinese hamster} SCOP: a.39.1.8 | Back alignment and structure |
|---|
Probab=99.82 E-value=1.6e-19 Score=156.20 Aligned_cols=138 Identities=18% Similarity=0.266 Sum_probs=123.5
Q ss_pred HHhhhcCCCCCCCccHHHHHHHHHhhCC-----CCCHHHHHHHHHHhhcc----chHHHHHhcCChHHHHHHHHHhhhhc
Q 042823 330 EKFIEMDTDKNGTLSYDELRAGLTKVGS-----MLTEFDVKHLMEAVKNS----STLESLCENLPTKEKQKLMEKFREMD 400 (477)
Q Consensus 330 ~~F~~~D~~~~G~i~~~el~~~l~~~~~-----~~~~~~~~~~~~~~d~~----~~~~~~~~~~~~~~~~~l~~~F~~~D 400 (477)
..|..+|.+++|.|+.+||..+++.+|. .++..++..+++.+|.+ .++.+|...+. ..+.++.+|+.+|
T Consensus 5 ~~F~~~D~d~~G~i~~~el~~~l~~lg~~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~eF~~~~~--~~~~~~~~F~~~D 82 (167)
T 1gjy_A 5 YGYFASVAGQDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFKELWA--VLNGWRQHFISFD 82 (167)
T ss_dssp HHHHHHHCCTTSCBCHHHHHHHHHHHTCSTTSCCCCHHHHHHHHHHHCTTCCSCBCHHHHHHHHH--HHHHHHHHHHHHC
T ss_pred HHHHHHHcCCCCcCCHHHHHHHHHhhcccCCCCCcCHHHHHHHHHHHCCCCCCcCCHHHHHHHHH--HHHHHHHHHHHhC
Confidence 4588999999999999999999999987 67899999999999754 35777766543 2468999999999
Q ss_pred CCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhhhCCCcHHHHHHHHHHhccCCCC
Q 042823 401 TDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIYKLETPELLEKAFQYLDKNSDQ 477 (477)
Q Consensus 401 ~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~l~~aF~~~D~d~~G 477 (477)
.|++|.|+.+||+.+++.+|..+++++++.+++.+ +++|.|+|+||+.++... +.+..+|+.+|+|++|
T Consensus 83 ~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~--d~dg~i~~~eF~~~~~~~------~~~~~~F~~~D~d~~G 151 (167)
T 1gjy_A 83 SDRSGTVDPQELQKALTTMGFRLNPQTVNSIAKRY--STSGKITFDDYIACCVKL------RALTDSFRRRDSAQQG 151 (167)
T ss_dssp TTCCSEECHHHHHHHHHTTTCCCCHHHHHHHHHHT--CBTTBEEHHHHHHHHHHH------HHHHHHHHHHCTTCCS
T ss_pred CCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHh--CcCCcCcHHHHHHHHHHH------HHHHHHHHHhCCCCCe
Confidence 99999999999999999999999999999999999 889999999999999764 5799999999999998
|
| >1juo_A Sorcin; calcium-binding proteins, penta-EF-hand, PEF, X-RAY, metal transport; 2.20A {Homo sapiens} SCOP: a.39.1.8 PDB: 2jc2_A | Back alignment and structure |
|---|
Probab=99.81 E-value=8.4e-20 Score=162.71 Aligned_cols=147 Identities=20% Similarity=0.298 Sum_probs=129.7
Q ss_pred CCchhhHHHHHHhhhcCCCCCCCccHHHHHHHHHhhCC-----CCCHHHHHHHHHHhhcc----chHHHHHhcCChHHHH
Q 042823 320 LPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGS-----MLTEFDVKHLMEAVKNS----STLESLCENLPTKEKQ 390 (477)
Q Consensus 320 ~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~-----~~~~~~~~~~~~~~d~~----~~~~~~~~~~~~~~~~ 390 (477)
.+.++...+++ |..+|.+++|.|+.+||..+++.+|. .++..++..+++.+|.+ .++.+|...+. ..+
T Consensus 27 ~~~~~~~~l~~-F~~~D~d~~G~i~~~el~~~l~~lg~~~~~~~~~~~~~~~l~~~~D~d~~g~i~~~eF~~~~~--~~~ 103 (198)
T 1juo_A 27 FPGQTQDPLYG-YFAAVAGQDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFKELWA--VLN 103 (198)
T ss_dssp CTTCCCCTTHH-HHHHHHTTTTEECHHHHHHHHHHHTTTCSSCCCCHHHHHHHHHHHCTTCSSCEEHHHHHHHHH--HHH
T ss_pred CCccccHHHHH-HHHHhCCCCCcCCHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhCCCCCCeECHHHHHHHHH--HHH
Confidence 34456667888 99999999999999999999999986 57899999999999754 35777766543 246
Q ss_pred HHHHHhhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhhhCCCcHHHHHHHHHH
Q 042823 391 KLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIYKLETPELLEKAFQY 470 (477)
Q Consensus 391 ~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~l~~aF~~ 470 (477)
.++.+|+.+|.|++|.|+.+||+.+++.+|..+++++++.+++.+ |++|.|+|+||+.++... +++..+|+.
T Consensus 104 ~~~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~l~~~~--d~dg~i~~~eF~~~~~~~------~~~~~~F~~ 175 (198)
T 1juo_A 104 GWRQHFISFDTDRSGTVDPQELQKALTTMGFRLSPQAVNSIAKRY--STNGKITFDDYIACCVKL------RALTDSFRR 175 (198)
T ss_dssp HHHHHHHTTCTTCCSEECHHHHHHHHHHTTCCCCHHHHHHHHHHT--CSSSSEEHHHHHHHHHHH------HHHHHHHHH
T ss_pred HHHHHHHHhCCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHh--CCCCeEcHHHHHHHHHHH------HHHHHHHHH
Confidence 899999999999999999999999999999999999999999999 889999999999999764 578999999
Q ss_pred hccCCCC
Q 042823 471 LDKNSDQ 477 (477)
Q Consensus 471 ~D~d~~G 477 (477)
+|+|++|
T Consensus 176 ~D~d~~G 182 (198)
T 1juo_A 176 RDTAQQG 182 (198)
T ss_dssp TCTTCCS
T ss_pred hCCCCCC
Confidence 9999998
|
| >3mse_B Calcium-dependent protein kinase, putative; CDPKS, malaria, structural genomics consortium, SGC, transfe; 2.10A {Plasmodium falciparum} | Back alignment and structure |
|---|
Probab=99.80 E-value=3.6e-19 Score=156.02 Aligned_cols=158 Identities=20% Similarity=0.380 Sum_probs=135.8
Q ss_pred hHHHHHHHHHhhhhHHHHhhhhhhhccCC--chhhHHHHHHhhhcCCCCCCCccHHHHHHHHHhhCCCCCHHHHHHHHHH
Q 042823 293 TSVILRMKQFRRMNKLKKLTIKVIVEYLP--DEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEA 370 (477)
Q Consensus 293 ~~~~~~~~~~~~~~~l~~~~~~~i~~~~~--~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~ 370 (477)
..++.++++|...+++++..+..+...++ +++...++++|..+|.+++|.|+.+||..+++.+|.. ..++..++..
T Consensus 4 ~~~~~~l~~~~~~~~l~~~~l~~~~~~l~~~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~g~~--~~~~~~~~~~ 81 (180)
T 3mse_B 4 PNVLNNMKSYMKHSNIRNIIINIMAHELSVINNHIKYINELFYKLDTNHNGSLSHREIYTVLASVGIK--KWDINRILQA 81 (180)
T ss_dssp HHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHTTCC--HHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHccCCHHHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHcCCC--HHHHHHHHHH
Confidence 46778899999999999999999988876 8888999999999999999999999999999999864 6889999999
Q ss_pred hhccc----hHHHHHhcC---ChHHHHHHHHHhhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCC---
Q 042823 371 VKNSS----TLESLCENL---PTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGN--- 440 (477)
Q Consensus 371 ~d~~~----~~~~~~~~~---~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~--- 440 (477)
+|.++ ++.+|+..+ .....+.++.+|+.+|+|++|+|+.+||+.+++ +..+++++++.+++.+|.++|
T Consensus 82 ~D~d~~g~i~~~Ef~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~--~~~~~~~~~~~~~~~~d~~~d~~~ 159 (180)
T 3mse_B 82 LDINDRGNITYTEFMAGCYRWKNIESTFLKAAFNKIDKDEDGYISKSDIVSLVH--DKVLDNNDIDNFFLSVHSIKKGIP 159 (180)
T ss_dssp HCTTCCSEECHHHHHHHHSCCTTC--CHHHHHHHHHCTTCSSCBCHHHHHHHTT--TSSCCHHHHHHHHHHHHTC-----
T ss_pred hCCCCCCcCcHHHHHHHHHhcccCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHc--CCCCCHHHHHHHHHHhhhccCccc
Confidence 97543 466665533 223346899999999999999999999999998 678999999999999999988
Q ss_pred -----CcccHHHHHHHHHh
Q 042823 441 -----GNIDSIEFVNLMTD 454 (477)
Q Consensus 441 -----g~i~~~eF~~~~~~ 454 (477)
|.|+|+||+.+|..
T Consensus 160 ~~~~~G~i~~~eF~~~l~~ 178 (180)
T 3mse_B 160 REHIINKISFQEFKDYMLS 178 (180)
T ss_dssp ----CCCBCHHHHHHHHHT
T ss_pred ccccCCeeeHHHHHHHHHh
Confidence 99999999999864
|
| >2f33_A Calbindin; EF-hand, Ca2+-binding, metal binding protein; NMR {Rattus norvegicus} PDB: 2g9b_A | Back alignment and structure |
|---|
Probab=99.80 E-value=3.1e-19 Score=166.30 Aligned_cols=160 Identities=20% Similarity=0.288 Sum_probs=136.0
Q ss_pred ccCCchhhHHHHHHhhhcCCCCCCCccHHHHHHHHHhhCCCCCH------HHHHHHHHHhhcc----chHHHHHhcCCh-
Q 042823 318 EYLPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTE------FDVKHLMEAVKNS----STLESLCENLPT- 386 (477)
Q Consensus 318 ~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~------~~~~~~~~~~d~~----~~~~~~~~~~~~- 386 (477)
..+++.+...++++|..+|.+++|.|+.+||..+++.+|..++. .++..++..+|.+ .++.+|+..+..
T Consensus 8 ~~l~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~l~~~~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~Ef~~~~~~~ 87 (263)
T 2f33_A 8 LQSSLITASQFFEIWLHFDADGSGYLEGKELQNLIQELLQARKKAGLELSPEMKTFVDQYGQRDDGKIGIVELAHVLPTE 87 (263)
T ss_dssp TTTSCCCHHHHHHHHHHHCTTCSSSBCSHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHTTGGGCCBCHHHHHHHTTSC
T ss_pred hhcCcccHHHHHHHHHHhCCCCCCCcCHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHhCCCCCCcCcHHHHHHHHhhh
Confidence 34566778889999999999999999999999999999766554 7888999998754 357777766532
Q ss_pred ------------HHHHHHHHHhhhhcCCCCCCcCHHHHHHHHHHc----CCCCCHHHHHH----HHHHhcCCCCCcccHH
Q 042823 387 ------------KEKQKLMEKFREMDTDNSDTLTLSELKAGLAKL----GSALEESEVNQ----YMEAGDIDGNGNIDSI 446 (477)
Q Consensus 387 ------------~~~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~----g~~~~~~~i~~----~~~~~d~~~~g~i~~~ 446 (477)
...++++.+|+.+|.|++|.|+.+||..++..+ |..++++++.. +++.+|.+++|.|+|+
T Consensus 88 ~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~ 167 (263)
T 2f33_A 88 ENFLLLFRCQQLKSCEEFMKTWRKYDTDHSGFIETEELKNFLKDLLEKANKTVDDTKLAEYTDLMLKLFDSNNDGKLELT 167 (263)
T ss_dssp TTHHHHHGGGTSSCHHHHHHHHTTSSTTTCSSBCHHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHTCSSSSSCBCHH
T ss_pred hhHHHHHHHhhccHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHhcCCCCCCeEcHH
Confidence 235679999999999999999999999999988 99999998887 9999999999999999
Q ss_pred HHHHHHHhh--------hCCCcHHHHHHHHHHhccCCCC
Q 042823 447 EFVNLMTDI--------YKLETPELLEKAFQYLDKNSDQ 477 (477)
Q Consensus 447 eF~~~~~~~--------~~~~~~~~l~~aF~~~D~d~~G 477 (477)
||+.++... ......+.+..+|+.||+|++|
T Consensus 168 ef~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G 206 (263)
T 2f33_A 168 EMARLLPVQENFLLKFQGIKMCGKEFNKAFELYDQDGNG 206 (263)
T ss_dssp HHHHHSCTTTCSHHHHHHTCCCHHHHHHHHHHHCCSSSS
T ss_pred HHHHHHHHHHHHHHHhcCcchHHHHHHHHHHHhCCCCCC
Confidence 999987541 2345678899999999999998
|
| >3j04_B Myosin regulatory light chain 2, smooth muscle MA isoform; phosphorylation, 2D crystalline arrays, myosin regulation, M light chains, structural protein; 20.00A {Gallus gallus} | Back alignment and structure |
|---|
Probab=99.80 E-value=1e-19 Score=153.00 Aligned_cols=134 Identities=19% Similarity=0.360 Sum_probs=119.5
Q ss_pred CchhhHHHHHHhhhcCCCCCCCccHHHHHHHHHhhCCCCCHHHHHHHHHHhhccchHHHHHhcCC-----hHHHHHHHHH
Q 042823 321 PDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNSSTLESLCENLP-----TKEKQKLMEK 395 (477)
Q Consensus 321 ~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-----~~~~~~l~~~ 395 (477)
++++...+++.|..+|.+++|.|+.+||..+++.+|..++..++..++..-++..++.+|+..+. ....+.++.+
T Consensus 2 s~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~g~i~~~eF~~~~~~~~~~~~~~~~l~~~ 81 (143)
T 3j04_B 2 DQSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLASMGKNPTDEYLEGMMSEAPGPINFTMFLTMFGEKLNGTDPEDVIRNA 81 (143)
T ss_dssp CHHHHHHHHHHHTTTCSSCTTCCCHHHHHHHHHHTSCCCCHHHHHTTTTTSSSCCCHHHHHHHHHHTTTSSCCHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCCCCCCcCHHHHHHHHHHhCCCCCHHHHHHHHHhCCCCcCHHHHHHHHHHHhccCCcHHHHHHH
Confidence 56778899999999999999999999999999999999999999998887445556777665432 1235689999
Q ss_pred hhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHh
Q 042823 396 FREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTD 454 (477)
Q Consensus 396 F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~ 454 (477)
|+.||+|++|+|+.+||+.++..+|..+++++++.+++.+|.|++|.|+|+||+.++..
T Consensus 82 F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~ 140 (143)
T 3j04_B 82 FACFDEEASGFIHEDHLRELLTTMGDRFTDEEVDEMYREAPIDKKGNFNYVEFTRILKH 140 (143)
T ss_dssp HTTSCSSSCCCCCTTTHHHHHHTSSSCCCHHHHHHHHHHTTCCSSSCCCSTHHHHHHHS
T ss_pred HHHHCCCCCCeEcHHHHHHHHHHcCCCCCHHHHHHHHHHcCCCCCCcCcHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999999999999875
|
| >3fwb_A Cell division control protein 31; gene gating, complex, cell cycle, cell division, mitosis, MR transport, nuclear pore complex, nucleus, phosphoprotein; 2.50A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2gv5_A 2doq_A 3fwc_A | Back alignment and structure |
|---|
Probab=99.79 E-value=8.4e-19 Score=150.41 Aligned_cols=139 Identities=23% Similarity=0.452 Sum_probs=124.1
Q ss_pred hhccCCchhhHHHHHHhhhcCCCCCCCccHHHHHHHHHhhCCCCCHHHHHHHHHHhhcc----chHHHHHhcCCh-----
Q 042823 316 IVEYLPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNS----STLESLCENLPT----- 386 (477)
Q Consensus 316 i~~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~----~~~~~~~~~~~~----- 386 (477)
....++.++...+..+|..+|.+++|.|+.+||..+++.+|..++..++..++..+|.+ .++.+|...+..
T Consensus 13 ~~~~l~~~~~~~l~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~ 92 (161)
T 3fwb_A 13 LNSELLEEQKQEIYEAFSLFDMNNDGFLDYHELKVAMKALGFELPKREILDLIDEYDSEGRHLMKYDDFYIVMGEKILKR 92 (161)
T ss_dssp TTTTSCHHHHHHHHHHHHHHCTTSSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTSSSCEEHHHHHHHHHHHHHTC
T ss_pred CCCCCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCcCCCCeEeHHHHHHHHHHHHhcC
Confidence 34567888999999999999999999999999999999999999999999999999754 346666654432
Q ss_pred HHHHHHHHHhhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHh
Q 042823 387 KEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTD 454 (477)
Q Consensus 387 ~~~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~ 454 (477)
...+.++.+|+.+|.|++|+|+.+||+.+++.+|..+++++++.+++.+|.+++|.|+|+||+.++.+
T Consensus 93 ~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~ 160 (161)
T 3fwb_A 93 DPLDEIKRAFQLFDDDHTGKISIKNLRRVAKELGETLTDEELRAMIEEFDLDGDGEINENEFIAICTD 160 (161)
T ss_dssp CHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHTTCSSSSSSEEHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHcCCCCCeEeHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHhc
Confidence 34678999999999999999999999999999999999999999999999999999999999998864
|
| >3qrx_A Centrin; calcium-binding, EF-hand, cell division, calcium binding, ME binding protein-toxin complex; 2.20A {Chlamydomonas reinhardtii} PDB: 2ggm_A 2ami_A 1zmz_A | Back alignment and structure |
|---|
Probab=99.79 E-value=1.2e-18 Score=150.93 Aligned_cols=137 Identities=26% Similarity=0.488 Sum_probs=122.5
Q ss_pred ccCCchhhHHHHHHhhhcCCCCCCCccHHHHHHHHHhhCCCCCHHHHHHHHHHhhccc----hHHHHHhcCCh-----HH
Q 042823 318 EYLPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNSS----TLESLCENLPT-----KE 388 (477)
Q Consensus 318 ~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~----~~~~~~~~~~~-----~~ 388 (477)
..+++++...+.++|..+|.+++|.|+.+||..+++.+|..++..++..++..+|.++ ++.+|...+.. ..
T Consensus 20 ~~l~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~ 99 (169)
T 3qrx_A 20 VGLTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTIDFEEFLTMMTAKMGERDS 99 (169)
T ss_dssp CCCCHHHHHHHHHHHHHHCTTCCSEECHHHHHHHHHHTSCCCCHHHHHHHHHHHCSSSSSSEEHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcCCHHHHHHHHHHHhcccCc
Confidence 4567788899999999999999999999999999999999999999999999997543 46777665533 23
Q ss_pred HHHHHHHhhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHh
Q 042823 389 KQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTD 454 (477)
Q Consensus 389 ~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~ 454 (477)
.+.+..+|+.+|.|++|.|+.+||+.++..+|..+++++++.+++.+|.|+||.|+|+||+.++.+
T Consensus 100 ~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~ 165 (169)
T 3qrx_A 100 REEILKAFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEADRNDDNEIDEDEFIRIMKK 165 (169)
T ss_dssp HHHHHHHHHHHCTTCSSSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCCSSSSCBCHHHHHHHHC-
T ss_pred HHHHHHHHHHhCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCCEeHHHHHHHHHh
Confidence 568899999999999999999999999999999999999999999999999999999999999864
|
| >3ox6_A Calcium-binding protein 1; EF-hand, calcium-sensor; 2.40A {Homo sapiens} PDB: 3ox5_A 2lan_A 2lap_A 2k7b_A 2k7c_A 2k7d_A | Back alignment and structure |
|---|
Probab=99.79 E-value=5.9e-19 Score=149.88 Aligned_cols=137 Identities=27% Similarity=0.497 Sum_probs=121.2
Q ss_pred hccCCchhhHHHHHHhhhcCCCCCCCccHHHHHHHHHhhCCCCCHHHHHHHHHHhhccc----hHHHHHhcCCh------
Q 042823 317 VEYLPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNSS----TLESLCENLPT------ 386 (477)
Q Consensus 317 ~~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~----~~~~~~~~~~~------ 386 (477)
...+++++...+...|..+|.+++|.|+.+||..+++.+|..++..++..+++.+|.++ ++.+|...+..
T Consensus 2 ~~~l~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~ 81 (153)
T 3ox6_A 2 DRSLRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFDDFVELMGPKLLAET 81 (153)
T ss_dssp CSCCCHHHHHHHHHHHHHHHHHCSSSCCHHHHHHHHHHTTCCCCHHHHHHHHHHHHTTSTTCCCHHHHHHHHHHHHTTCC
T ss_pred cccCCHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCccCcHHHHHHHHHHHhhccc
Confidence 34567888999999999999999999999999999999999999999999999987543 46666554421
Q ss_pred ---HHHHHHHHHhhhhcCCCCCCcCHHHHHHHHHH-cCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHH
Q 042823 387 ---KEKQKLMEKFREMDTDNSDTLTLSELKAGLAK-LGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMT 453 (477)
Q Consensus 387 ---~~~~~l~~~F~~~D~~~~G~I~~~el~~~l~~-~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~ 453 (477)
...+.++.+|+.+|.|++|.|+.+||+.++.. +|..+++++++.+++.+|.+++|.|+|+||+.++.
T Consensus 82 ~~~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~ 152 (153)
T 3ox6_A 82 ADMIGVKELRDAFREFDTNGDGEISTSELREAMRALLGHQVGHRDIEEIIRDVDLNGDGRVDFEEFVRMMS 152 (153)
T ss_dssp HHHHCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHHSSCCCHHHHHHHHHHHCSSSSSSBCHHHHHHHTC
T ss_pred cccccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhcCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHh
Confidence 12578999999999999999999999999999 89999999999999999999999999999998874
|
| >3khe_A Calmodulin-like domain protein kinase isoform 3; calcium dependent kinase, structural genomics, structural GE consortium, SGC, ATP-binding; 1.95A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=99.79 E-value=3.3e-19 Score=157.70 Aligned_cols=163 Identities=26% Similarity=0.405 Sum_probs=143.1
Q ss_pred chHHHHHHHHHhhhhHHHHhhhhhhhccC-CchhhHHHHHHhhhcCCCCCCCccHHHHHHHHHhh-----------CCCC
Q 042823 292 DTSVILRMKQFRRMNKLKKLTIKVIVEYL-PDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKV-----------GSML 359 (477)
Q Consensus 292 ~~~~~~~~~~~~~~~~l~~~~~~~i~~~~-~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~-----------~~~~ 359 (477)
....+.++++|...+.+++..+..+...+ +.++...+.+.|..+|.+++|.|+.+||..++..+ +..+
T Consensus 5 ~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~ 84 (191)
T 3khe_A 5 LTGALGNMKKFQSSQKLAQAAMLFMGSKLTTLEETKELTQIFRQLDNNGDGQLDRKELIEGYRKLMQWKGDTVSDLDSSQ 84 (191)
T ss_dssp HHHHHHHHHHCCCCCHHHHHHHHHHHHHSSCTTTTHHHHHHHHHHCTTCSSEECHHHHHHHHHHHHC-----CCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHcCCCCCCCcHHHHHHHHHHHHhhcccccccccchh
Confidence 34567889999999999999999998887 88999999999999999999999999999999988 6667
Q ss_pred CHHHHHHHHHHhhccc----hHHHHHhcCChH----HHHHHHHHhhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHH
Q 042823 360 TEFDVKHLMEAVKNSS----TLESLCENLPTK----EKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQY 431 (477)
Q Consensus 360 ~~~~~~~~~~~~d~~~----~~~~~~~~~~~~----~~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~ 431 (477)
+..++..+++.+|.++ ++.+|...+... ..+.++.+|+.+|.|++|.|+.+||+.++. |..+++++++.+
T Consensus 85 ~~~~~~~~~~~~D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~E~~~~l~--~~~~~~~~~~~~ 162 (191)
T 3khe_A 85 IEAEVDHILQSVDFDRNGYIEYSEFVTVCMDKQLLLSRERLLAAFQQFDSDGSGKITNEELGRLFG--VTEVDDETWHQV 162 (191)
T ss_dssp HHHHHHHHHHHTCTTCSSSEEHHHHHHHHSCHHHHCCHHHHHHHHHHHCTTCSSEECHHHHHHHTT--SSCCCHHHHHHH
T ss_pred hHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHhcccchHHHHHHHHHHHCCCCcCcCCHHHHHHHHc--cCCCCHHHHHHH
Confidence 7888999999997543 477776654322 346889999999999999999999999998 889999999999
Q ss_pred HHHhcCCCCCcccHHHHHHHHHhhh
Q 042823 432 MEAGDIDGNGNIDSIEFVNLMTDIY 456 (477)
Q Consensus 432 ~~~~d~~~~g~i~~~eF~~~~~~~~ 456 (477)
++.+|.|++|.|+|+||+.++....
T Consensus 163 ~~~~D~~~dg~i~~~eF~~~~~~~~ 187 (191)
T 3khe_A 163 LQECDKNNDGEVDFEEFVEMMQKIC 187 (191)
T ss_dssp HHHHCTTCSSSEEHHHHHHHHHHHH
T ss_pred HHHhCCCCCCCCCHHHHHHHHHHHh
Confidence 9999999999999999999998654
|
| >1wdc_B Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Y 1kqm_B* 1kwo_B* 1l2o_B* 1qvi_Y* 1s5g_Y* 1sr6_B 1b7t_Y 3jtd_B 3jvt_B 1scm_B 1kk8_B* 1dfk_Y 1dfl_Y* 2w4t_Y 2w4v_Y 2w4w_Y 2otg_B* 2os8_B* 3pn7_B ... | Back alignment and structure |
|---|
Probab=99.79 E-value=5.3e-19 Score=151.00 Aligned_cols=139 Identities=16% Similarity=0.387 Sum_probs=121.4
Q ss_pred hhccCCchhhHHHHHHhhhcCCCCCCCccHHHHHHHHHhhCCCCCHHHHHHHHHHhhccchHHHHHhcCCh-----HHHH
Q 042823 316 IVEYLPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNSSTLESLCENLPT-----KEKQ 390 (477)
Q Consensus 316 i~~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~~~~ 390 (477)
+...++.++...++.+|..+|.+++|.|+.+||..+++.+|..++..++..++...++..++.+|+..+.. ...+
T Consensus 8 ~~~~l~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~g~i~~~eF~~~~~~~~~~~~~~~ 87 (156)
T 1wdc_B 8 VLTKLPQKQIQEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLKEAPGPLNFTMFLSIFSDKLSGTDSEE 87 (156)
T ss_dssp ----CCHHHHHHHHHHHHHHCTTCSSSCCHHHHHHHHHHHSSCCCHHHHHHHHTTSSSCCCHHHHHHHHHHHTCSCCCHH
T ss_pred hhccCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHhCCCcCcHHHHHHHHHHHhcCCChHH
Confidence 34556778888999999999999999999999999999999999999999999876666677777654422 2356
Q ss_pred HHHHHhhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhh
Q 042823 391 KLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDI 455 (477)
Q Consensus 391 ~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~ 455 (477)
.++.+|+.||+|++|+|+.+||+.+|..+|..+++++++.+++.+|.+ +|.|+|+||+.++...
T Consensus 88 ~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~d~~-dg~i~~~eF~~~~~~~ 151 (156)
T 1wdc_B 88 TIRNAFAMFDEQETKKLNIEYIKDLLENMGDNFNKDEMRMTFKEAPVE-GGKFDYVKFTAMIKGS 151 (156)
T ss_dssp HHHHHHHTTCTTCCSCEEHHHHHHHHHHSSSCCCHHHHHHHHHHCCEE-TTEECHHHHHHHHHTS
T ss_pred HHHHHHHHHCcCCCCccCHHHHHHHHHHhCCCCCHHHHHHHHHhcCCC-CCEEeHHHHHHHHhcC
Confidence 899999999999999999999999999999999999999999999999 9999999999998753
|
| >2f2o_A Calmodulin fused with calmodulin-binding domain of calcineurin; EF-hands, calcium, metal binding protein; 2.17A {Bos taurus} PDB: 2f2p_A | Back alignment and structure |
|---|
Probab=99.79 E-value=8.7e-19 Score=153.30 Aligned_cols=155 Identities=25% Similarity=0.450 Sum_probs=124.5
Q ss_pred ccCCchhhHHHHHHhhhcCCCCCCCccHHHHHHHHHhhCCCCCHHHHHHHHHHhhcc----chHHHHHhcCCh-----HH
Q 042823 318 EYLPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNS----STLESLCENLPT-----KE 388 (477)
Q Consensus 318 ~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~----~~~~~~~~~~~~-----~~ 388 (477)
..++.++...++..|..+|.+++|.|+.+||..+++.+|..++..++..+++.+|.+ .++.+|...+.. ..
T Consensus 3 ~~l~~~~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~EF~~~~~~~~~~~~~ 82 (179)
T 2f2o_A 3 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDS 82 (179)
T ss_dssp ---CCSHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHHHHHHH
T ss_pred ccCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhccCCCCCCcHHHHHHHHHHHccCccc
Confidence 346778889999999999999999999999999999999999999999999999754 346676654422 24
Q ss_pred HHHHHHHhhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhhhCC----CcHHHH
Q 042823 389 KQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIYKL----ETPELL 464 (477)
Q Consensus 389 ~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~----~~~~~l 464 (477)
...++.+|+.+|.|++|.|+.+||+.++..+|..+++++++.+++.+|.|++|.|+|+||+.++...... ...+.+
T Consensus 83 ~~~~~~~F~~~D~d~~G~I~~~E~~~~l~~~g~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~~~~~~~~~~~~~~~ 162 (179)
T 2f2o_A 83 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAKGGGGGAAARKEVI 162 (179)
T ss_dssp HHHHHHHHHHHCTTCSSEECHHHHHHHHHHC--CCCHHHHHHHHHHHCTTCSSSEEHHHHHHHSCC-------------C
T ss_pred HHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHcCCCCCCcCcHHHHHHHHHHcCCCchHHHHHHHH
Confidence 4678999999999999999999999999999999999999999999999999999999999998754331 223455
Q ss_pred HHHHHHhc
Q 042823 465 EKAFQYLD 472 (477)
Q Consensus 465 ~~aF~~~D 472 (477)
+++|+.+.
T Consensus 163 ~~~~~~~~ 170 (179)
T 2f2o_A 163 RNKIRAIG 170 (179)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 66666554
|
| >4ds7_A Calmodulin, CAM; protein binding, metal binding, structura; 2.15A {Kluyveromyces lactis} PDB: 1lkj_A 2lhh_A 1f54_A 1f55_A | Back alignment and structure |
|---|
Probab=99.79 E-value=1.7e-18 Score=145.99 Aligned_cols=136 Identities=26% Similarity=0.477 Sum_probs=120.4
Q ss_pred hccCCchhhHHHHHHhhhcCCCCCCCccHHHHHHHHHhhCCCCCHHHHHHHHHHhhccc----hHHHHHhcCC-----hH
Q 042823 317 VEYLPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNSS----TLESLCENLP-----TK 387 (477)
Q Consensus 317 ~~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~----~~~~~~~~~~-----~~ 387 (477)
...++.++...+...|..+|.+++|.|+.+||..+++.+|..++..++..++..+|.++ ++.+|+..+. ..
T Consensus 2 ~~~l~~~~~~~l~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~i~~~ef~~~~~~~~~~~~ 81 (147)
T 4ds7_A 2 SQNLTEEQIAEFKEAFALFDKDNSGSISASELATVMRSLGLSPSEAEVADLMNEIDVDGNHAIEFSEFLALMSRQLKCND 81 (147)
T ss_dssp --CCCHHHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTSSSEEEHHHHHHHHHHHHHTHH
T ss_pred CCcCCHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHHhCCCCCHHHHHHHHHHhccCCCCcCcHHHHHHHHHHhccCCC
Confidence 34567888999999999999999999999999999999999999999999999997543 4666665442 23
Q ss_pred HHHHHHHHhhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHH
Q 042823 388 EKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMT 453 (477)
Q Consensus 388 ~~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~ 453 (477)
..+.++.+|+.+|.|++|.|+.+||+.++..+|..+++++++.+++.+| +++|.|+|+||+.++.
T Consensus 82 ~~~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d-~~dg~i~~~eF~~~l~ 146 (147)
T 4ds7_A 82 SEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDEMLREVS-DGSGEINIKQFAALLS 146 (147)
T ss_dssp HHHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHS-SSCSSEEHHHHHHHTT
T ss_pred cHHHHHHHHHHhCCCCCCeECHHHHHHHHHHcCCCCCHHHHHHHHHHhc-CCCCcCcHHHHHHHHh
Confidence 4578999999999999999999999999999999999999999999999 9999999999999874
|
| >2aao_A CDPK, calcium-dependent protein kinase, isoform AK1; calmodulin-like domain, EF calcium binding protein, transferase; 2.00A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=99.78 E-value=6.7e-19 Score=151.96 Aligned_cols=152 Identities=35% Similarity=0.576 Sum_probs=124.0
Q ss_pred HHhhhhHHHHhhhhhhhccCCchhhHHHHHHhhhcCCCCCCCccHHHHHHHHHhhCCCCCHHHHHHHHHHhhcc----ch
Q 042823 301 QFRRMNKLKKLTIKVIVEYLPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNS----ST 376 (477)
Q Consensus 301 ~~~~~~~l~~~~~~~i~~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~----~~ 376 (477)
+|...+.+++..+..+...+++++...+...|..+|.+++|.|+.+||..++..+|..++..++..+++.+|.+ .+
T Consensus 2 ~f~~~~~~~~~~~~~~~~~l~~~~~~~l~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~ 81 (166)
T 2aao_A 2 QFSAMNKFKKMALRVIAESLSEEEIAGLKEMFNMIDADKSGQITFEELKAGLKRVGANLKESEILDLMQAADVDNSGTID 81 (166)
T ss_dssp ----CHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHCTTCCSSBCHHHHHHHGGGGTCCCCHHHHHHHHHHHCTTCCSSBC
T ss_pred chhhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCCCeEeHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEc
Confidence 56677888888888888889999999999999999999999999999999999999999999999999999754 34
Q ss_pred HHHHHhcCCh----HHHHHHHHHhhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHH
Q 042823 377 LESLCENLPT----KEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLM 452 (477)
Q Consensus 377 ~~~~~~~~~~----~~~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~ 452 (477)
+.+|+..+.. ...+.++.+|+.+|.|++|.|+.+||+.++..+| +++++++.+++.+|.+++|.|+|+||+.++
T Consensus 82 ~~ef~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~~--~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~ 159 (166)
T 2aao_A 82 YKEFIAATLHLNKIEREDHLFAAFTYFDKDGSGYITPDELQQACEEFG--VEDVRIEELMRDVDQDNDGRIDYNEFVAMM 159 (166)
T ss_dssp HHHHHHHHTTCHHHHTTHHHHHHHHHHCTTCSSSBCHHHHHHHTCC----------CCHHHHHCTTCSSSBCHHHHHHHH
T ss_pred HHHHHHHHHHHhhcccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcC--CCHHHHHHHHHHhCCCCCCcEeHHHHHHHH
Confidence 6666654422 2346789999999999999999999999998887 568889999999999999999999999998
Q ss_pred Hh
Q 042823 453 TD 454 (477)
Q Consensus 453 ~~ 454 (477)
..
T Consensus 160 ~~ 161 (166)
T 2aao_A 160 QK 161 (166)
T ss_dssp C-
T ss_pred Hh
Confidence 64
|
| >2jnf_A Troponin C; stretch activated muscle contraction, EF-hand, metal binding protein; NMR {Lethocerus indicus} PDB: 2k2a_A | Back alignment and structure |
|---|
Probab=99.77 E-value=8.4e-19 Score=150.02 Aligned_cols=137 Identities=22% Similarity=0.373 Sum_probs=121.0
Q ss_pred ccCCchhhHHHHHHhhhcC-CCCCCCccHHHHHHHHHhhCCCCCHHHHHHHHHHhhccc----hHHHHHhcCC----h--
Q 042823 318 EYLPDEETQALKEKFIEMD-TDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNSS----TLESLCENLP----T-- 386 (477)
Q Consensus 318 ~~~~~~~~~~l~~~F~~~D-~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~----~~~~~~~~~~----~-- 386 (477)
..+++++...++++|..+| .+++|.|+.+||..+++.+|..++..++..+++.+|.++ ++.+|+..+. .
T Consensus 5 ~~l~~~~~~~l~~~F~~~D~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~eF~~~~~~~~~~~~ 84 (158)
T 2jnf_A 5 SKLSSNQVKLLETAFRDFETPEGSGRVSTDQIGIILEVLGIQQTKSTIRQLIDEFDPFGNGDIDFDSFKIIGARFLGEEV 84 (158)
T ss_dssp TTSCHHHHHHHHHHHHHSBCSSSCSSEEHHHHHHHHHHTTCSCSHHHHHHHHHHHCTTCCSEECHHHHHHHHHHHCCCCC
T ss_pred hhCCHHHHHHHHHHHHHhCCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhcccc
Confidence 3457788889999999999 999999999999999999999999999999999997542 4666655431 1
Q ss_pred ---HHHHHHHHHhhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHh
Q 042823 387 ---KEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTD 454 (477)
Q Consensus 387 ---~~~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~ 454 (477)
.....++.+|+.+|+|++|+|+.+||+.+++.+|..+++++++.+++.+|.+++|.|+|+||+.++..
T Consensus 85 ~~~~~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~ 155 (158)
T 2jnf_A 85 NPEQMQQELREAFRLYDKEGNGYISTDVMREILAELDETLSSEDLDAMIDEIDADGSGTVDFEEFMGVMTG 155 (158)
T ss_dssp CTTTTSSTHHHHHHHHCSSSSSSEEHHHHHHHHHHHCTTCCHHHHHHHHHHHCSSCCSEECSHHHHHHTSS
T ss_pred chhhHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHhCCcCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHhc
Confidence 33457899999999999999999999999999999999999999999999999999999999998854
|
| >1top_A Troponin C; contractIle system protein; 1.78A {Gallus gallus} SCOP: a.39.1.5 PDB: 1ncy_A 1ncz_A 1ncx_A 1ytz_C* 1yv0_C 1tnw_A 1tnx_A 5tnc_A 2w49_0 2w4u_0 4tnc_A 1a2x_A 1tcf_A 1tn4_A 2tn4_A 1aj4_A 1jc2_A 1fi5_A 1sbj_A 1scv_A ... | Back alignment and structure |
|---|
Probab=99.77 E-value=2.7e-18 Score=147.34 Aligned_cols=139 Identities=23% Similarity=0.390 Sum_probs=123.3
Q ss_pred hhccCCchhhHHHHHHhhhcCCCCCCCccHHHHHHHHHhhCCCCCHHHHHHHHHHhhccc----hHHHHHhcCChH----
Q 042823 316 IVEYLPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNSS----TLESLCENLPTK---- 387 (477)
Q Consensus 316 i~~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~----~~~~~~~~~~~~---- 387 (477)
+...+++++...+.+.|..+|.+++|.|+..||..++..+|..++..++..+++.+|.++ ++.+|...+...
T Consensus 10 ~~~~ls~~~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~ 89 (162)
T 1top_A 10 ARAFLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQMKED 89 (162)
T ss_dssp HHHHSCHHHHHHHHHHHHTTTCSCSSEEEGGGHHHHHHHTTCCCCHHHHHHHHHHHCTTSCCEEEHHHHHHHHHHHHHHH
T ss_pred hhhhcCHHHHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHHcCCCCCcEeHHHHHHHHHHHhccc
Confidence 344678888999999999999999999999999999999999999999999999997542 466665544221
Q ss_pred ----HHHHHHHHhhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHh
Q 042823 388 ----EKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTD 454 (477)
Q Consensus 388 ----~~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~ 454 (477)
....++.+|+.+|.|++|.|+.+||+.++..+|..+++++++.+++.+|.+++|.|+|+||+.++..
T Consensus 90 ~~~~~~~~~~~~F~~~D~d~~G~I~~~e~~~~l~~~g~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~ 160 (162)
T 1top_A 90 AKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFDEFLKMMEG 160 (162)
T ss_dssp HHHHHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHTTTCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHS
T ss_pred cccccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHhh
Confidence 4567899999999999999999999999999999999999999999999999999999999998864
|
| >3dtp_E RLC, myosin regulatory light chain; muscle protein, smooth muscle, myosin subfragment 2, heavy meromyosin, essential light chain; 20.00A {Avicularia avicularia} | Back alignment and structure |
|---|
Probab=99.77 E-value=6.4e-19 Score=156.69 Aligned_cols=139 Identities=22% Similarity=0.385 Sum_probs=124.7
Q ss_pred hhccCCchhhHHHHHHhhhcCCCCCCCccHHHHHHHHHhhCCCCCHHHHHHHHHHhhccchHHHHHhcCC-----hHHHH
Q 042823 316 IVEYLPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNSSTLESLCENLP-----TKEKQ 390 (477)
Q Consensus 316 i~~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-----~~~~~ 390 (477)
....++.++...++.+|..+|.+++|.|+..||..+|+.+|..++..++..++..+++..++.+|+..+. .....
T Consensus 47 ~~~~ls~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~lg~~~~~~~~~~l~~~~~g~i~~~eF~~~~~~~~~~~~~~~ 126 (196)
T 3dtp_E 47 VFAMFTQHQVQEFKEAFQLIDQDKDGFISKNDIRATFDSLGRLCTEQELDSMVAEAPGPINFTMFLTIFGDRIAGTDEED 126 (196)
T ss_dssp SSCSSCTTTHHHHHHHHHHHCCSCSSBCCHHHHHHHHHTTSCCCCHHHHHHHHTTSSSCCBHHHHHHHHHHCCCSSCCHH
T ss_pred hhhhCCHHHHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHccCCCcHHHHHHHHHHHhcCCCcHH
Confidence 3455678888999999999999999999999999999999999999999999998877777777766442 23356
Q ss_pred HHHHHhhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhh
Q 042823 391 KLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDI 455 (477)
Q Consensus 391 ~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~ 455 (477)
.+..+|+.||.|++|+|+.+||+.+| .+|..+++++++.++..+|.|+||.|+|+||+.+|...
T Consensus 127 ~l~~~F~~~D~d~~G~Is~~El~~~l-~~g~~~~~~~~~~l~~~~D~d~dG~I~~~EF~~~l~~~ 190 (196)
T 3dtp_E 127 VIVNAFNLFDEGDGKCKEETLKRSLT-TWGEKFSQDEVDQALSEAPIDGNGLIDIKKFAQILTKG 190 (196)
T ss_dssp HHHHHHHTTCSSSSCCBHHHHHHHHH-HSSSCCCHHHHHHHHHSSCEETTEECHHHHHHHHHSSC
T ss_pred HHHHHHHHHCCCCCCcCcHHHHHHHH-HcCCCCCHHHHHHHHHHcCCCCCCEEeHHHHHHHHHcC
Confidence 89999999999999999999999999 99999999999999999999999999999999999753
|
| >2bl0_C Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum} | Back alignment and structure |
|---|
Probab=99.77 E-value=1e-18 Score=146.61 Aligned_cols=131 Identities=18% Similarity=0.376 Sum_probs=116.4
Q ss_pred chhhHHHHHHhhhcCCCCCCCccHHHHHHHHHhhCCCCCHHHHHHHHHHhhccc----hHHHHHhcCCh-----HHHHHH
Q 042823 322 DEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNSS----TLESLCENLPT-----KEKQKL 392 (477)
Q Consensus 322 ~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~----~~~~~~~~~~~-----~~~~~l 392 (477)
+++...++.+|..+|.+++|.|+.+||..+++.+|..++..++..+++.+|.++ ++.+|+..+.. ...+.+
T Consensus 2 ~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~~ 81 (142)
T 2bl0_C 2 DDQVSEFKEAFELFDSERTGFITKEGLQTVLKQFGVRVEPAAFNEMFNEADATGNGKIQFPEFLSMMGRRMKQTTSEDIL 81 (142)
T ss_dssp CHHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHTCCCCHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHTTCCCHHHH
T ss_pred HHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCcCCCCeeeHHHHHHHHHHHhcCCChHHHH
Confidence 456788999999999999999999999999999999999999999999997543 46666554432 245689
Q ss_pred HHHhhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHH
Q 042823 393 MEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMT 453 (477)
Q Consensus 393 ~~~F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~ 453 (477)
+.+|+.+|+|++|.|+.+||+.++..+|..+++++++.+++.+| +++|.|+|+||+.++.
T Consensus 82 ~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~d-~~dg~i~~~eF~~~~~ 141 (142)
T 2bl0_C 82 RQAFRTFDPEGTGYIPKAALQDALLNLGDRLKPHEFAEFLGITE-TEKGQIRYDNFINTMF 141 (142)
T ss_dssp HHHHHHTCCSSCSCEEHHHHHHHHHHSSSCCCHHHHHHHHHHHC-CSSSEECSHHHHTTTC
T ss_pred HHHHHHHCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhC-CCCCcEeHHHHHHHHc
Confidence 99999999999999999999999999999999999999999999 9999999999998653
|
| >1dtl_A Cardiac troponin C; helix-turn-helix, structural protein; HET: BEP; 2.15A {Gallus gallus} SCOP: a.39.1.5 PDB: 1j1d_A 1j1e_A 2jt3_A 2jt0_A 1la0_A 2jtz_A* 2jt8_A* 2kfx_T* 1wrk_A* 1wrl_A* 1ap4_A 1lxf_C* 1mxl_C 1spy_A 2krd_C* 2l1r_A* 3rv5_A* 2ctn_A 2kgb_C 2jxl_A ... | Back alignment and structure |
|---|
Probab=99.77 E-value=1.9e-18 Score=148.22 Aligned_cols=139 Identities=24% Similarity=0.419 Sum_probs=120.8
Q ss_pred hhccCCchhhHHHHHHhhhcCCCC-CCCccHHHHHHHHHhhCCCCCHHHHHHHHHHhhcc----chHHHHHhcCC-----
Q 042823 316 IVEYLPDEETQALKEKFIEMDTDK-NGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNS----STLESLCENLP----- 385 (477)
Q Consensus 316 i~~~~~~~~~~~l~~~F~~~D~~~-~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~----~~~~~~~~~~~----- 385 (477)
+...++.++...+++.|..+|.++ +|.|+.+||..+++.+|..++..++..+++.+|.+ .++.+|...+.
T Consensus 8 ~~~~l~~~~~~~l~~~F~~~D~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~eF~~~~~~~~~~ 87 (161)
T 1dtl_A 8 AVEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKD 87 (161)
T ss_dssp GGGGSCHHHHHHHHHHHHHHTTTCGGGSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTSSSSBCHHHHHHHHHHHHC-
T ss_pred HHhhCCHHHHHHHHHHHHHHcCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHhcc
Confidence 345677888999999999999999 99999999999999999999999999999999754 24666654332
Q ss_pred ---hHHHHHHHHHhhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHh
Q 042823 386 ---TKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTD 454 (477)
Q Consensus 386 ---~~~~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~ 454 (477)
....+.++.+|+.+|.|++|.|+.+||+.++..+|..+++++++.+++.+|.|++|.|+|+||+.++..
T Consensus 88 ~~~~~~~~~~~~~F~~~D~d~~G~i~~~El~~~l~~~g~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~ 159 (161)
T 1dtl_A 88 DSKGKSEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMKG 159 (161)
T ss_dssp ----CHHHHHHHHHHHHCTTCSSEEEHHHHGGGGTTC--CCCHHHHHHHHHHHCTTSSSEEEHHHHHHHHHC
T ss_pred cccchHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHc
Confidence 234567999999999999999999999999999999999999999999999999999999999998864
|
| >4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A | Back alignment and structure |
|---|
Probab=99.77 E-value=6.9e-19 Score=169.87 Aligned_cols=141 Identities=14% Similarity=0.129 Sum_probs=99.2
Q ss_pred ccccccccccCCeEEEEEEEccCCceEEEEEeecCCcc--------------ch-h----hHHHHHHHHHHHHhccCCCC
Q 042823 25 YFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKM--------------RL-A----ENDMIRREIQIRLYLSGQPN 85 (477)
Q Consensus 25 Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~--------------~~-~----~~~~~~~e~~~~~~l~~hpn 85 (477)
|.++++||+|++|.||+|.+. +|+.||||+++..... .. . ......+|...+.++. +++
T Consensus 97 Y~I~~~IG~Gk~a~VY~a~d~-~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~-~~g 174 (397)
T 4gyi_A 97 YSVGSRIGVGKESDIMIVADE-KGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALY-EEG 174 (397)
T ss_dssp SEEEEEEEECSSEEEEEEECT-TCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHH-HTT
T ss_pred EEecCEeeeCCceEEEEEECC-CCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHH-hcC
Confidence 899999999999999999974 6999999987532100 00 0 0112245677777772 333
Q ss_pred ee--EEEEEEEeCCeEEEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCC
Q 042823 86 VV--EFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDN 163 (477)
Q Consensus 86 iv--~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~ 163 (477)
+. ..++. . . .+|||||++|++|.++. ....+..++.||+.+|.+||++|||||||||.|||+...++.
T Consensus 175 v~vp~p~~~--~-~-~~LVME~i~G~~L~~l~------~~~~~~~l~~qll~~l~~lH~~gIVHrDLKp~NILl~~dgd~ 244 (397)
T 4gyi_A 175 FPVPEPIAQ--S-R-HTIVMSLVDALPMRQVS------SVPDPASLYADLIALILRLAKHGLIHGDFNEFNILIREEKDA 244 (397)
T ss_dssp CSCCCEEEE--E-T-TEEEEECCSCEEGGGCC------CCSCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEEEEECS
T ss_pred CCCCeeeec--c-C-ceEEEEecCCccHhhhc------ccHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHEEEeCCCCc
Confidence 32 22222 2 2 26999999999886432 223456789999999999999999999999999999543311
Q ss_pred -------CCEEEeecCCcccc
Q 042823 164 -------ALLKVTDFGSALLF 177 (477)
Q Consensus 164 -------~~~kl~Dfg~a~~~ 177 (477)
..+.||||+.+...
T Consensus 245 ~d~~~~~~~~~iID~~Q~V~~ 265 (397)
T 4gyi_A 245 EDPSSITLTPIIIXFPQMVSM 265 (397)
T ss_dssp SCTTSEEEEEEECCCTTCEET
T ss_pred ccccccccceEEEEeCCcccC
Confidence 13899999977643
|
| >2mys_C Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1m8q_C* 1mvw_C* 1o18_F* 1o19_C* 1o1a_C* 1o1b_C* 1o1c_C* 1o1d_C* 1o1e_C* 1o1f_C* 1o1g_C* | Back alignment and structure |
|---|
Probab=99.77 E-value=6.5e-18 Score=142.74 Aligned_cols=134 Identities=22% Similarity=0.347 Sum_probs=118.2
Q ss_pred CCchhhHHHHHHhhhcCCCCCCCccHHHHHHHHHhhCCCCCHHHHHHHHHHh---hcc---chHHHHHhcCC-------h
Q 042823 320 LPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAV---KNS---STLESLCENLP-------T 386 (477)
Q Consensus 320 ~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~---d~~---~~~~~~~~~~~-------~ 386 (477)
+++++...+..+|..+|.+++|.|+.+||..+++.+|..++..++..+++.+ |.+ .++.+|+..+. .
T Consensus 2 l~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~l~~~~~~~d~~~g~i~~~eF~~~~~~~~~~~~~ 81 (149)
T 2mys_C 2 FSKAAADDFKEAFLLFDRTGDAKITASQVGDIARALGQNPTNAEINKILGNPSKEEMNAAAITFEEFLPMLQAAANNKDQ 81 (149)
T ss_pred CCHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhhhccccCCcCcHHHHHHHHHHHhccCCc
Confidence 4567788999999999999999999999999999999999999999999988 643 24555554332 2
Q ss_pred HHHHHHHHHhhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHh
Q 042823 387 KEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTD 454 (477)
Q Consensus 387 ~~~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~ 454 (477)
.....++.+|+.+|+|++|.|+.+||+.++..+|..++++++..+++. |.+++|.|+|+||+.++..
T Consensus 82 ~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~-d~~~dg~i~~~eF~~~~~~ 148 (149)
T 2mys_C 82 GTFEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEKMTEEEVEELMKG-QEDSNGCINYEAFVKHIMS 148 (149)
T ss_pred chHHHHHHHHHHhCCCCCceEcHHHHHHHHHHhCCCCCHHHHHHHHhh-CCCCCCcEeHHHHHHHHhc
Confidence 345789999999999999999999999999999999999999999999 9999999999999998853
|
| >2bl0_B Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum} | Back alignment and structure |
|---|
Probab=99.75 E-value=5e-18 Score=142.83 Aligned_cols=127 Identities=27% Similarity=0.466 Sum_probs=113.5
Q ss_pred HHHHhhhcCCCCCCCccHHHHHHHHHhhCCCCCHHHHHHHHHHhhcc--chHHHHHhcCC------hHHHHHHHHHhhhh
Q 042823 328 LKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNS--STLESLCENLP------TKEKQKLMEKFREM 399 (477)
Q Consensus 328 l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~--~~~~~~~~~~~------~~~~~~l~~~F~~~ 399 (477)
++++|..+|.+++|.|+.+||..+++.+|..++..++..++.. +++ .++.+|+..+. ......++.+|+.+
T Consensus 7 l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~-~~~g~i~~~eF~~~~~~~~~~~~~~~~~l~~~F~~~ 85 (145)
T 2bl0_B 7 IQECFQIFDKDNDGKVSIEELGSALRSLGKNPTNAELNTIKGQ-LNAKEFDLATFKTVYRKPIKTPTEQSKEMLDAFRAL 85 (145)
T ss_dssp HHHHHHHHCTTCSSCEEGGGHHHHHHHTTCCCCHHHHHHHHHH-HTSSEECHHHHHHHHTSCCCCGGGGHHHHHHHHHHH
T ss_pred HHHHHHHhCCCCcCccCHHHHHHHHHHhCCCCCHHHHHHHHHh-cCCCeEcHHHHHHHHHHHhhcCcccHHHHHHHHHHh
Confidence 8999999999999999999999999999999999999999987 544 35666654332 23467899999999
Q ss_pred cCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhh
Q 042823 400 DTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDI 455 (477)
Q Consensus 400 D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~ 455 (477)
|.|++|+|+.+||+.+++.+|..+++++++.+++.+|.+++|.|+|+||+.++...
T Consensus 86 D~d~~G~i~~~e~~~~l~~~g~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~ 141 (145)
T 2bl0_B 86 DKEGNGTIQEAELRQLLLNLGDALTSSEVEELMKEVSVSGDGAINYESFVDMLVTG 141 (145)
T ss_dssp CSSSSSEEEHHHHHHHHHHSSSCCCHHHHHHHHTTCCCCTTSEEEHHHHHHHHHHS
T ss_pred CCCCCCeEcHHHHHHHHHHcCCCCCHHHHHHHHHHcCCCCCCcEeHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999999998753
|
| >1wdc_C Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Z 1kqm_C* 1kwo_C* 1l2o_C* 1qvi_Z* 1s5g_Z* 1sr6_C 1b7t_Z 3jvt_C 3jtd_C 1kk8_C* 2ec6_C 1dfk_Z 1dfl_Z* 2w4t_Z 2w4v_Z 2w4w_Z 2otg_C* 2os8_C* 3pn7_C ... | Back alignment and structure |
|---|
Probab=99.75 E-value=1.9e-18 Score=147.49 Aligned_cols=135 Identities=21% Similarity=0.273 Sum_probs=119.1
Q ss_pred CCchhhHHHHHHhhhcCC--CCCCCccHHHHHHHHHhhCCCCCHHHHHHHHHHhhcc----chHHHHHhcCC------hH
Q 042823 320 LPDEETQALKEKFIEMDT--DKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNS----STLESLCENLP------TK 387 (477)
Q Consensus 320 ~~~~~~~~l~~~F~~~D~--~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~----~~~~~~~~~~~------~~ 387 (477)
+++++...++++|..+|. +++|.|+.+||..+++.+|..++..++..+ ..+|.+ .++.+|+..+. ..
T Consensus 3 ls~~~~~~l~~~F~~~D~~~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l-~~~D~~~~g~i~~~eF~~~~~~~~~~~~~ 81 (156)
T 1wdc_C 3 LSQDEIDDLKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRNEDVFAV-GGTHKMGEKSLPFEEFLPAYEGLMDCEQG 81 (156)
T ss_dssp CCHHHHHHHHHHHHHHHHHTCSSSCEEGGGHHHHHHHTTCCCCHHHHHHT-TCCSSTTSCEECHHHHHHHHHHHTTSCCC
T ss_pred CCHHHHHHHHHHHHHHccCCCCCCCCcHHHHHHHHHHcCCCCCHHHHHHH-HhhCCCCCCeeeHHHHHHHHHHHhhccCC
Confidence 567788899999999999 999999999999999999999999999999 777643 24666654332 23
Q ss_pred HHHHHHHHhhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHH--hcCCCCCcccHHHHHHHHHhh
Q 042823 388 EKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEA--GDIDGNGNIDSIEFVNLMTDI 455 (477)
Q Consensus 388 ~~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~--~d~~~~g~i~~~eF~~~~~~~ 455 (477)
....++.+|+.||.|++|+|+.+||+.++..+|..+++++++.+++. +|.+++|.|+|+||+.++...
T Consensus 82 ~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~ 151 (156)
T 1wdc_C 82 TFADYMEAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIKLTDLQEDLEGNVKYEDFVKKVMAG 151 (156)
T ss_dssp CHHHHHHHHHTTCSSSSSEEEHHHHHHHHHHSSSCCCHHHHHHHHHHHTCCCCTTSEEEHHHHHHHHHHC
T ss_pred hHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCCCcEeHHHHHHHHhcC
Confidence 45789999999999999999999999999999999999999999999 999999999999999998753
|
| >1m45_A MLC1P, myosin light chain; protein-peptide complex, myosin light chain, cell cycle protein; 1.65A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 1m46_A 1n2d_A 2fcd_A 2fce_A | Back alignment and structure |
|---|
Probab=99.75 E-value=8.2e-19 Score=148.33 Aligned_cols=129 Identities=22% Similarity=0.391 Sum_probs=112.0
Q ss_pred HHHHHHhhhcCCCCCCCccHHHHHHHHHhhCCCCCHHHHHHHHHHh-hcc----chHHHHHhcCCh----------HHHH
Q 042823 326 QALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAV-KNS----STLESLCENLPT----------KEKQ 390 (477)
Q Consensus 326 ~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~-d~~----~~~~~~~~~~~~----------~~~~ 390 (477)
..++++|..+|.+++|.|+.+||..+++.+|..++..++..+++.+ |.+ .++.+|+..+.. ...+
T Consensus 4 ~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~~D~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~~ 83 (148)
T 1m45_A 4 RANKDIFTLFDKKGQGAIAKDSLGDYLRAIGYNPTNQLVQDIINADSSLRDASSLTLDQITGLIEVNEKELDATTKAKTE 83 (148)
T ss_dssp CCCTTCHHHHCTTCCSEEEGGGHHHHHHHTTCCCCHHHHHHHHHC--CC--CCEEEHHHHHHHHHHTHHHHHGGGCCCTH
T ss_pred HHHHHHHHHHCCCCCCCCCHHHHHHHHHHhCCCCCHHHHHHHHHHhhCCCCCCeEcHHHHHHHHHHHHhhccccccccHH
Confidence 3466789999999999999999999999999999999999999999 754 246665543322 2236
Q ss_pred HHHHHhhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHh
Q 042823 391 KLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTD 454 (477)
Q Consensus 391 ~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~ 454 (477)
.++.+|+.+|+|++|.|+.+||+.++..+|..+++++++.+++.+|.+++|.|+|+||+.++..
T Consensus 84 ~~~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~d~d~dg~i~~~eF~~~~~~ 147 (148)
T 1m45_A 84 DFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNGEIDYKKFIEDVLR 147 (148)
T ss_dssp HHHHHHHTTCSSSSSEEEHHHHHHHHHHSTTCCCHHHHHHHHTTCCCCTTSEEEHHHHHHHHHC
T ss_pred HHHHHHHHhCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHhc
Confidence 8999999999999999999999999999999999999999999999999999999999998864
|
| >1w7j_B Myosin light chain 1; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Homo sapiens} SCOP: a.39.1.5 PDB: 1w7i_B* 1oe9_B* 3j04_C 1br1_B* 1br4_B* 1i84_T* 3dtp_C 2w4a_C 2w4g_C 2w4h_C | Back alignment and structure |
|---|
Probab=99.74 E-value=4.1e-19 Score=150.76 Aligned_cols=133 Identities=22% Similarity=0.363 Sum_probs=110.3
Q ss_pred CCchhhHHHHHHhhhcCCCCCCCccHHHHHHHHHhhCCCCCHHHHHHHHHHhhcc------chHHHHHhcCCh-------
Q 042823 320 LPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNS------STLESLCENLPT------- 386 (477)
Q Consensus 320 ~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~------~~~~~~~~~~~~------- 386 (477)
+++++...++.+|..+|.+++|.|+.+||..+++.+|..++..++..+++.+|.+ .++.+|+..+..
T Consensus 4 ls~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~d~~~~~~g~i~~~eF~~~~~~~~~~~~~ 83 (151)
T 1w7j_B 4 FNKDQLEEFKEAFELFDRVGDGKILYSQCGDVMRALGQNPTNAEVLKVLGNPKSDELKSRRVDFETFLPMLQAVAKNRGQ 83 (151)
T ss_dssp -------CHHHHHHHHCCSSSSEEESTTHHHHHHHTTCCCCHHHHHHHTTCCCHHHHTTCEEEHHHHHHHHHHHCC----
T ss_pred CCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCcCcCCCCcCcHHHHHHHHHHHhccCCC
Confidence 4567778899999999999999999999999999999999999999999887644 246666554321
Q ss_pred HHHHHHHHHhhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHH
Q 042823 387 KEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMT 453 (477)
Q Consensus 387 ~~~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~ 453 (477)
...+.++.+|+.+|.|++|+|+.+||+.+++.+|..+++++++.+++.+| +++|.|+|+||+.++.
T Consensus 84 ~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~d-~~dg~i~~~eF~~~~~ 149 (151)
T 1w7j_B 84 GTYEDYLEGFRVFDKEGNGKVMGAELRHVLTTLGEKMTEEEVETVLAGHE-DSNGCINYEAFLKHIL 149 (151)
T ss_dssp ----CCHHHHHTTCTTSSSEEEHHHHHHHHHHSSSCCCHHHHHHHHTTCC-CTTSEEEHHHHHHHTC
T ss_pred CcHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHhcc-CCCCeEeHHHHHHHHh
Confidence 23567889999999999999999999999999999999999999999999 9999999999999874
|
| >1qv0_A Obelin, OBL; photoprotein, bioluminescence, atomic resolution, Ca binding, EF-hand, luminescent protein; HET: CZH; 1.10A {Obelia longissima} SCOP: a.39.1.5 PDB: 1qv1_A* 1sl9_A* 1el4_A* 2f8p_A* 1sl7_A 1jf2_A* 1s36_A* 1jf0_A* 3kpx_A* | Back alignment and structure |
|---|
Probab=99.74 E-value=1.1e-17 Score=148.36 Aligned_cols=143 Identities=18% Similarity=0.214 Sum_probs=115.3
Q ss_pred hhhhccCCchhhHHHHHHhhhcCCCCCCCccHHHHH-----HHHHhhCCCCCHH-----HHHHHHHHhhcc----chHHH
Q 042823 314 KVIVEYLPDEETQALKEKFIEMDTDKNGTLSYDELR-----AGLTKVGSMLTEF-----DVKHLMEAVKNS----STLES 379 (477)
Q Consensus 314 ~~i~~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~-----~~l~~~~~~~~~~-----~~~~~~~~~d~~----~~~~~ 379 (477)
..+...+++++...+.++|..+|.+++|.|+.+||. .+++.+|..++.. ++..+++.+|.+ .++.+
T Consensus 8 ~~~~~~~s~~~~~~l~~~F~~~D~d~~G~i~~~El~~~~~~~~l~~~g~~~~~~~~~~~~~~~l~~~~D~d~~g~i~~~E 87 (195)
T 1qv0_A 8 KLKTDFDNPRWIKRHKHMFDFLDINGNGKITLDEIVSKASDDICAKLEATPEQTKRHQVCVEAFFRGCGMEYGKEIAFPQ 87 (195)
T ss_dssp CCSCCTTCHHHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHTHHHHTTCCHHHHHHHHHHHHHHHHHTTCCTTCCBCHHH
T ss_pred hcCcccCCHHHHHHHHHHHhHcCCCCCCcCcHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHHHcCCCCCceEcHHH
Confidence 334455688899999999999999999999999999 6888899888776 588899998754 34666
Q ss_pred HHhcCChHH-----------HHHHH----HHhhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCccc
Q 042823 380 LCENLPTKE-----------KQKLM----EKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNID 444 (477)
Q Consensus 380 ~~~~~~~~~-----------~~~l~----~~F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~ 444 (477)
|+..+.... .+.++ .+|+.||.|++|+|+.+||+.++..+|..+++++++.+++.+|.|+||.|+
T Consensus 88 F~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~~~~~~D~d~dg~i~ 167 (195)
T 1qv0_A 88 FLDGWKQLATSELKKWARNEPTLIREWGDAVFDIFDKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDNAGDLD 167 (195)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHTC----CEECHHHHHHHHHHHSSCCCHHHHHHHHHHSCCCTTSCEE
T ss_pred HHHHHHHHHhhhhhcccccHHHHHHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCC
Confidence 665432111 11233 899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhh
Q 042823 445 SIEFVNLMTDIY 456 (477)
Q Consensus 445 ~~eF~~~~~~~~ 456 (477)
|+||+.++...+
T Consensus 168 ~~eF~~~~~~~~ 179 (195)
T 1qv0_A 168 VDEMTRQHLGFW 179 (195)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHc
Confidence 999999887654
|
| >2be4_A Hypothetical protein LOC449832; DR.36843, BC083168, calicium binding, EF-hand superfamily, S genomics, protein structure initiative, PSI; 2.10A {Danio rerio} PDB: 2q4u_A | Back alignment and structure |
|---|
Probab=99.74 E-value=2.7e-18 Score=160.75 Aligned_cols=159 Identities=21% Similarity=0.322 Sum_probs=130.0
Q ss_pred cCCchhhHHHHHHhhhcCCCCCCCccHHHHHHHHH----hhCC--CCCHHHHHHHH----HHhhcc----chHHHHHhc-
Q 042823 319 YLPDEETQALKEKFIEMDTDKNGTLSYDELRAGLT----KVGS--MLTEFDVKHLM----EAVKNS----STLESLCEN- 383 (477)
Q Consensus 319 ~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~----~~~~--~~~~~~~~~~~----~~~d~~----~~~~~~~~~- 383 (477)
.++..+...++++|..+|.+++|.|+.+||..+++ .+|. .++..++..++ ..+|.+ .++.+|...
T Consensus 4 ~~~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~lg~~~~~~~~~~~~~~~~~f~~~D~d~~g~i~~~Ef~~~~ 83 (272)
T 2be4_A 4 AFANLDAAGFLQIWQHFDADDNGYIEGKELDDFFRHMLKKLQPKDKITDERVQQIKKSFMSAYDATFDGRLQIEELANMI 83 (272)
T ss_dssp CCCCCCHHHHHHHHHHHCTTCCSEEEGGGHHHHHHHHHHHHSTTSCCCHHHHHHHHHHHSCHHHHTCCSEEEHHHHHHHH
T ss_pred HHHhcCHHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhcCCCCCcEeHHHHHHHH
Confidence 34556677899999999999999999999999999 8998 89999988765 445533 356666655
Q ss_pred CC--------------hHHHHHHHHHhhhhcCCCCCCcCHHHHHHHHHHc----CCCCCHHHHHH----HHHHhcCCCCC
Q 042823 384 LP--------------TKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKL----GSALEESEVNQ----YMEAGDIDGNG 441 (477)
Q Consensus 384 ~~--------------~~~~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~----g~~~~~~~i~~----~~~~~d~~~~g 441 (477)
+. ....++++.+|+.+|.|++|.|+.+||..++..+ |..++++++.. +++.+|.+++|
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~D~~~dg 163 (272)
T 2be4_A 84 LPQEENFLLIFRREAPLDNSVEFMKIWRKYDADSSGYISAAELKNFLKDLFLQHKKKIPPNKLDEYTDAMMKIFDKNKDG 163 (272)
T ss_dssp SCHHHHHHHHHHHHSCCCCHHHHHHHHHHHCTTCCSEEEGGGHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHCSSCSS
T ss_pred hhhhHHHHHHHhhccCcccHHHHHHHHHHhCCCCCCccCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHhccCCCC
Confidence 21 1234678999999999999999999999999988 99999988754 99999999999
Q ss_pred cccHHHHHHHHHhh------------hCCCcHHHHHHHHHHhccCCCC
Q 042823 442 NIDSIEFVNLMTDI------------YKLETPELLEKAFQYLDKNSDQ 477 (477)
Q Consensus 442 ~i~~~eF~~~~~~~------------~~~~~~~~l~~aF~~~D~d~~G 477 (477)
.|+|+||+.++... ......+++..+|+.||+|++|
T Consensus 164 ~i~~~ef~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G 211 (272)
T 2be4_A 164 RLDLNDLARILALQENFLLQFKMDASSQVERKRDFEKIFAHYDVSRTG 211 (272)
T ss_dssp EEEHHHHGGGSCCSSCSSTTSCCCHHHHHHHHHHHHHHHHHHCTTCCS
T ss_pred cCcHHHHHHHHhhhHHHHhhhhhhhccccccHHHHHHHHHHhCCCCCC
Confidence 99999999887531 0112346899999999999998
|
| >2qac_A Myosin A tail domain interacting protein MTIP; malaria invasion, structural genomics, PSI, protein structur initiative, structural genomics of pathogenic protozoa CONS SGPP; 1.70A {Plasmodium falciparum} PDB: 2auc_A | Back alignment and structure |
|---|
Probab=99.74 E-value=4.4e-18 Score=143.53 Aligned_cols=128 Identities=24% Similarity=0.289 Sum_probs=114.9
Q ss_pred hhHHHHHHhhhcCCCC-CCCccHHHHHHHHHhhCCCCCHHHHHHHHHHhhccchHHHHHhcCC-----hHHHHHHHHHhh
Q 042823 324 ETQALKEKFIEMDTDK-NGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNSSTLESLCENLP-----TKEKQKLMEKFR 397 (477)
Q Consensus 324 ~~~~l~~~F~~~D~~~-~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-----~~~~~~l~~~F~ 397 (477)
+...++..|..+|.++ +|.|+.+|+..+++.+|..++..++..+++.+|.+.++.+|...+. ....+.++.+|+
T Consensus 12 ~~~~l~~~F~~~D~d~~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~d~~i~~~eF~~~~~~~~~~~~~~~~l~~~F~ 91 (146)
T 2qac_A 12 EKVDESDVRIYFNEKSSGGKISIDNASYNARKLGLAPSSIDEKKIKELYGDNLTYEQYLEYLSICVHDKDNVEELIKMFA 91 (146)
T ss_dssp HHSCHHHHHHHHHHHCBTTBEEHHHHHHHHHHTTCCCCHHHHHHHHHHHCSEECHHHHHHHHHHTCCTTCCHHHHHHHHH
T ss_pred HHHHHHHHHHHhCccCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCHHHHHHHHHHHhcCcchHHHHHHHHH
Confidence 4446789999999999 9999999999999999999999999999999987777777765432 223568999999
Q ss_pred hhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHH
Q 042823 398 EMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMT 453 (477)
Q Consensus 398 ~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~ 453 (477)
.||+|++|+|+.+||+.++..+|..+++++++.+++.+ |++|.|+|+||+.++.
T Consensus 92 ~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~--d~dg~i~~~eF~~~l~ 145 (146)
T 2qac_A 92 HFDNNCTGYLTKSQMKNILTTWGDALTDQEAIDALNAF--SSEDNIDYKLFCEDIL 145 (146)
T ss_dssp TTCTTCSSEEEHHHHHHHHHHSSSCCCHHHHHHHHHHH--CSSSEEEHHHHHHHHT
T ss_pred HhCCCCCCCCCHHHHHHHHHHhCCCCCHHHHHHHHHHc--CCCCcCcHHHHHHHHh
Confidence 99999999999999999999999999999999999999 9999999999999874
|
| >1ggw_A Protein (CDC4P); light chain, cytokinesis, cell cycle, EF-hand; NMR {Schizosaccharomyces pombe} SCOP: a.39.1.5 | Back alignment and structure |
|---|
Probab=99.74 E-value=3.7e-18 Score=142.85 Aligned_cols=126 Identities=17% Similarity=0.337 Sum_probs=111.3
Q ss_pred hHHHHHHhhhcCCCCCCCccHHHHHHHHHhhCCCCCHHHHHHHHHHhhcc--chHHHHHhcCCh-------HHHHHHHHH
Q 042823 325 TQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNS--STLESLCENLPT-------KEKQKLMEK 395 (477)
Q Consensus 325 ~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~--~~~~~~~~~~~~-------~~~~~l~~~ 395 (477)
...++++|..+|.+++|.|+.+||..+++.+|..++..++..++. +++ .++.+|+..+.. .....++.+
T Consensus 4 ~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~--~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~~~~ 81 (140)
T 1ggw_A 4 DSPYKQAFSLFDRHGTGRIPKTSIGDLLRACGQNPTLAEITEIES--TLPAEVDMEQFLQVLNRPNGFDMPGDPEEFVKG 81 (140)
T ss_dssp CTTTHHHHHHTCSSSSSEECHHHHHHHHHHTSCCCCHHHHHHHHT--TSCSSEEHHHHHHHHCTTSSSSSSCCHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHh--CCCCcCcHHHHHHHHHHHhcccCcccHHHHHHH
Confidence 345788999999999999999999999999999999999999988 433 457776654322 234789999
Q ss_pred hhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHH
Q 042823 396 FREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMT 453 (477)
Q Consensus 396 F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~ 453 (477)
|+.+|+|++|+|+.+||+.++..+|..+++++++.+++.+|. ++|.|+|+||+.++.
T Consensus 82 F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~d~-~dg~i~~~eF~~~~~ 138 (140)
T 1ggw_A 82 FQVFDKDATGMIGVGELRYVLTSLGEKLSNEEMDELLKGVPV-KDGMVNYHDFVQMIL 138 (140)
T ss_dssp HHTTCSSCSSCCCHHHHHHHHHHHHSCSCHHHHHHHHHHTTC-SSCCSTTTHHHHHHH
T ss_pred HHHhCCCCCCcEeHHHHHHHHHHcCCCCCHHHHHHHHHhccC-CCCcEeHHHHHHHHh
Confidence 999999999999999999999999999999999999999999 999999999999885
|
| >1uhk_A Aequorin 2, aequorin; EF-hand motif, complex, luminescent protein; HET: CZN; 1.60A {Aequorea victoria} SCOP: a.39.1.5 PDB: 1ej3_A* 1uhi_A* 1uhj_A* 1uhh_A* 1sl8_A | Back alignment and structure |
|---|
Probab=99.73 E-value=1.9e-17 Score=146.24 Aligned_cols=139 Identities=19% Similarity=0.250 Sum_probs=117.0
Q ss_pred ccCCchhhHHHHHHhhhcCCCCCCCccHHHHH-----HHHHhhCCCCCHH-----HHHHHHHHhhccc----hHHHHHhc
Q 042823 318 EYLPDEETQALKEKFIEMDTDKNGTLSYDELR-----AGLTKVGSMLTEF-----DVKHLMEAVKNSS----TLESLCEN 383 (477)
Q Consensus 318 ~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~-----~~l~~~~~~~~~~-----~~~~~~~~~d~~~----~~~~~~~~ 383 (477)
...++++...++++|..+|.+++|.|+.+||. .+++.+|..++.. ++..+++.+|.++ ++.+|+..
T Consensus 8 ~~~~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~~~~~~l~~~g~~~~~~~~~~~~~~~l~~~~D~d~~g~i~~~EF~~~ 87 (191)
T 1uhk_A 8 DFDNPRWIGRHKHMFNFLDVNHNGKISLDEMVYKASDIVINNLGATPEQAKRHKDAVEAFFGGAGMKYGVETDWPAYIEG 87 (191)
T ss_dssp CTTCHHHHHHHHHHHHHHCTTCCSEEEHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHTTCCTTCEEEHHHHHHH
T ss_pred ccCCHHHHHHHHHHHhhccCCCCCcCcHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHhCcCCCCcCcHHHHHHH
Confidence 34467788899999999999999999999999 7899999888877 6888999987543 46666554
Q ss_pred CChH-----------HHHHHH----HHhhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHH
Q 042823 384 LPTK-----------EKQKLM----EKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEF 448 (477)
Q Consensus 384 ~~~~-----------~~~~l~----~~F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF 448 (477)
+... ..+.++ .+|+.+|.|++|+|+.+||+.+++.+|..+++++++.+++.+|.|++|.|+|+||
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~El~~~l~~~g~~~~~~~~~~~~~~~D~d~dG~i~~~eF 167 (191)
T 1uhk_A 88 WKKLATDELEKYAKNEPTLIRIWGDALFDIVDKDQNGAITLDEWKAYTKAAGIIQSSEDCEETFRVCDIDESGQLDVDEM 167 (191)
T ss_dssp HHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHTSCCSHHHHHHHHHHSCCCTTSCEEHHHH
T ss_pred HHHHhcchhhhhhhhhHHHHHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHH
Confidence 3211 011233 8999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhh
Q 042823 449 VNLMTDIY 456 (477)
Q Consensus 449 ~~~~~~~~ 456 (477)
+.++...+
T Consensus 168 ~~~~~~~~ 175 (191)
T 1uhk_A 168 TRQHLGFW 175 (191)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 99987654
|
| >3bow_A Calpain-2 catalytic subunit; cysteine protease, inhibitor, cell membrane, hydrolase, MEMB protease, thiol protease, phosphoprotein; 2.40A {Rattus norvegicus} PDB: 3df0_A 1df0_A 1u5i_A 1kfu_L 1kfx_L | Back alignment and structure |
|---|
Probab=99.72 E-value=1.8e-17 Score=174.74 Aligned_cols=148 Identities=22% Similarity=0.279 Sum_probs=133.3
Q ss_pred CCchh-hHHHHHHhhhcCCCCCCCccHHHHHHHHHhh--------CCCCCHHHHHHHHHHhhccc----hHHHHHhcCCh
Q 042823 320 LPDEE-TQALKEKFIEMDTDKNGTLSYDELRAGLTKV--------GSMLTEFDVKHLMEAVKNSS----TLESLCENLPT 386 (477)
Q Consensus 320 ~~~~~-~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~--------~~~~~~~~~~~~~~~~d~~~----~~~~~~~~~~~ 386 (477)
+++++ ...+++.|..+| +++|.|+.+||..+|+.+ +..++..++..++..+|.++ ++++|...+.
T Consensus 525 ls~~e~~~~l~~~F~~~D-d~dG~Is~~El~~~L~~l~~~~~~~~g~~~s~~~~~~l~~~~D~d~~G~I~f~EF~~l~~- 602 (714)
T 3bow_A 525 ANEEDIGDGFRRLFAQLA-GEDAEISAFELQTILRRVLAKREDIKSDGFSIETCKIMVDMLDEDGSGKLGLKEFYILWT- 602 (714)
T ss_dssp CSGGGCCHHHHHHHHHHH-GGGTSBCHHHHHHHHHHHHTTCTTSCCSCCCHHHHHHHHHHHCCSSCSSBCHHHHHHHHH-
T ss_pred CChhhHHHHHHHHHHHHc-CCCCcCCHHHHHHHHHHHhhhcccccCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHH-
Confidence 45666 889999999999 999999999999999998 77899999999999998543 5777776553
Q ss_pred HHHHHHHHHhhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhhhCCCcHHHHHH
Q 042823 387 KEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIYKLETPELLEK 466 (477)
Q Consensus 387 ~~~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~l~~ 466 (477)
..+.++.+|+.||+|++|+|+.+||+.+|+.+|..+++++++.+++.+| |+||.|+|+||+.++... +.+..
T Consensus 603 -~~~~l~~~F~~~D~d~dG~Is~~El~~~L~~~G~~ls~~~~~~l~~~~D-d~dG~Isf~EF~~~l~~~------~~l~~ 674 (714)
T 3bow_A 603 -KIQKYQKIYREIDVDRSGTMNSYEMRKALEEAGFKLPCQLHQVIVARFA-DDELIIDFDNFVRCLVRL------EILFK 674 (714)
T ss_dssp -HHHHHHHHHHHHCTTCCSSEEHHHHHHHHHHTTEECCHHHHHHHHHHHS-CTTCEECHHHHHHHHHHH------HHHHH
T ss_pred -HHHHHHHHHHHhCCCCCCeECHHHHHHHHHHcCCCCCHHHHHHHHHHhC-CCCCeEcHHHHHHHHHHH------HHHHH
Confidence 3478999999999999999999999999999999999999999999999 999999999999999753 58999
Q ss_pred HHHHhccCCCC
Q 042823 467 AFQYLDKNSDQ 477 (477)
Q Consensus 467 aF~~~D~d~~G 477 (477)
+|+.||+|++|
T Consensus 675 ~F~~~D~d~dG 685 (714)
T 3bow_A 675 IFKQLDPENTG 685 (714)
T ss_dssp HHSSSCSSCCS
T ss_pred HHHHhCCCCCC
Confidence 99999999998
|
| >3e3r_A Calcyphosin, calcyphosine; human calcyphosine, EF-hand, phosphoprotein, calcium binding; 2.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.72 E-value=6.9e-17 Score=144.29 Aligned_cols=145 Identities=20% Similarity=0.362 Sum_probs=119.1
Q ss_pred chhhHHHHHHhhhcCCCCCCCccHHHHHHHHHhhCCCCCHHHHHHHHHHhhcc----chHHHHHhcCC----hHHHHHHH
Q 042823 322 DEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNS----STLESLCENLP----TKEKQKLM 393 (477)
Q Consensus 322 ~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~----~~~~~~~~~~~----~~~~~~l~ 393 (477)
..+...+++.|..+|.+++|.|+.+||..+++.+|..++..++..+++.+|.+ .++.+|...+. ....+.++
T Consensus 33 ~~~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~ef~~~~~~~~~~~~~~~~~ 112 (204)
T 3e3r_A 33 ASGIQGLARFFRQLDRDGSRSLDADEFRQGLAKLGLVLDQAEAEGVCRKWDRNGSGTLDLEEFLRALRPPMSQAREAVIA 112 (204)
T ss_dssp -------CHHHHHHCTTCCSSBCHHHHHHHHHTTTCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHTSCCCCHHHHHHHH
T ss_pred chhHHHHHHHHHHHccCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhccCCCCcCcHHHHHHHHHhhcCchHHHHHH
Confidence 45667889999999999999999999999999999999999999999999754 34777776553 34567899
Q ss_pred HHhhhhcCCCCCCcCHHHHHHHHH-------HcCCCCCHHHHHHHHHHhcC-CCCCcccHHHHHHHHHhhhC-CCcHHHH
Q 042823 394 EKFREMDTDNSDTLTLSELKAGLA-------KLGSALEESEVNQYMEAGDI-DGNGNIDSIEFVNLMTDIYK-LETPELL 464 (477)
Q Consensus 394 ~~F~~~D~~~~G~I~~~el~~~l~-------~~g~~~~~~~i~~~~~~~d~-~~~g~i~~~eF~~~~~~~~~-~~~~~~l 464 (477)
.+|+.+|.|++|+|+.+||..++. ..|...++++++.+++.+|. |+||.|+|+||+.++..... ..+++++
T Consensus 113 ~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~dg~Is~~EF~~~~~~~~~~~~~d~~f 192 (204)
T 3e3r_A 113 AAFAKLDRSGDGVVTVDDLRGVYSGRAHPKVRSGEWTEDEVLRRFLDNFDSSEKDGQVTLAEFQDYYSGVSASMNTDEEF 192 (204)
T ss_dssp HHHHHHCTTCSSEECHHHHHHHCCCTTCHHHHTTSSCHHHHHHHHHHHHSCSSCCSCEEHHHHHHHHHHHHHHCSSHHHH
T ss_pred HHHHHhCcCCCCeEeHHHHHHHHccccCCccccCCCChHHHHHHHHHHhhccCCCCcCcHHHHHHHHHHcCccCCChHHH
Confidence 999999999999999999999998 45777888999999999998 99999999999999987663 4454444
Q ss_pred HH
Q 042823 465 EK 466 (477)
Q Consensus 465 ~~ 466 (477)
..
T Consensus 193 ~~ 194 (204)
T 3e3r_A 193 VA 194 (204)
T ss_dssp HH
T ss_pred HH
Confidence 33
|
| >2ccm_A Calexcitin; EF hand, calcium, signaling protein; 1.8A {Loligo pealeii} | Back alignment and structure |
|---|
Probab=99.71 E-value=1.3e-16 Score=140.87 Aligned_cols=137 Identities=15% Similarity=0.205 Sum_probs=117.5
Q ss_pred ccCCchhhHHHHHHhhhc-CCCCCCCccHHHHHHHHHhh----CCCCCHHHHHHHH-----------HHhhccc----hH
Q 042823 318 EYLPDEETQALKEKFIEM-DTDKNGTLSYDELRAGLTKV----GSMLTEFDVKHLM-----------EAVKNSS----TL 377 (477)
Q Consensus 318 ~~~~~~~~~~l~~~F~~~-D~~~~G~i~~~el~~~l~~~----~~~~~~~~~~~~~-----------~~~d~~~----~~ 377 (477)
..++......++..|..+ |.|++|.|+.+||..++..+ |..++..++..++ +.+|.++ ++
T Consensus 4 ~~ls~~~~~~l~~~F~~~~D~d~dG~i~~~E~~~~l~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~D~d~dG~i~~ 83 (191)
T 2ccm_A 4 HQLSDFQRNKILRVFNTFYDCNHDGVIEWDDFELAIKKICNLHSWPTDGKKHNEARATLKLIWDGLRKYADENEDEQVTK 83 (191)
T ss_dssp CCCCHHHHHHHHHHHHHHTCTTCSSEECHHHHHHHHHHHHHHHTCCTTSHHHHHHHHHHHHHHHHHHHHHCTTCSSCEEH
T ss_pred hhccHHHHHHHHHhccccccCCCCCeeeHHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCCeECH
Confidence 345677788999999999 99999999999999999999 9889988998888 7777442 46
Q ss_pred HHHHhcC-------------ChHHHHHHHHHhhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCccc
Q 042823 378 ESLCENL-------------PTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNID 444 (477)
Q Consensus 378 ~~~~~~~-------------~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~ 444 (477)
.+|...+ .......++.+|+.+|.|++|.|+.+||..++..+| +++++++.+++.+|.|+||.|+
T Consensus 84 ~Ef~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~I~~~E~~~~l~~~g--~~~~~~~~~~~~~D~d~dG~i~ 161 (191)
T 2ccm_A 84 EEWLKMWAECVKSVEKGESLPEWLTKYMNFMFDVNDTSGDNIIDKHEYSTVYMSYG--IPKSDCDAAFDTLSDGGKTMVT 161 (191)
T ss_dssp HHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHCTTCSSBCCHHHHHHHHHTTT--CCHHHHHHHHHHHTTTTTSCCB
T ss_pred HHHHHHHHHHhccccchhhchHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhC--CCHHHHHHHHHHhCCCCCCCcC
Confidence 6665433 223346789999999999999999999999999998 8899999999999999999999
Q ss_pred HHHHHHHHHhhh
Q 042823 445 SIEFVNLMTDIY 456 (477)
Q Consensus 445 ~~eF~~~~~~~~ 456 (477)
|+||+.++....
T Consensus 162 ~~Ef~~~~~~~~ 173 (191)
T 2ccm_A 162 REIFARLWTEYF 173 (191)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh
Confidence 999999987654
|
| >1nya_A Calerythrin; EF-hand, metal binding protein; NMR {Saccharopolyspora erythraea} SCOP: a.39.1.5 | Back alignment and structure |
|---|
Probab=99.71 E-value=2.1e-16 Score=137.42 Aligned_cols=134 Identities=20% Similarity=0.240 Sum_probs=113.2
Q ss_pred CchhhHHHHHHhhhcCCCCCCCccHHHHHH----HHHhhCCCCCHHHHH-----------HHHHHhhccc----hHHHHH
Q 042823 321 PDEETQALKEKFIEMDTDKNGTLSYDELRA----GLTKVGSMLTEFDVK-----------HLMEAVKNSS----TLESLC 381 (477)
Q Consensus 321 ~~~~~~~l~~~F~~~D~~~~G~i~~~el~~----~l~~~~~~~~~~~~~-----------~~~~~~d~~~----~~~~~~ 381 (477)
++++...++++|..+|.|++|.|+.+||.. +++.+|..++..++. .+++.+|.++ ++.+|.
T Consensus 2 s~~~~~~l~~~F~~~D~d~~G~i~~~el~~~~~~~l~~~g~~~~~~~~~~l~~~~~~~~~~lf~~~D~d~dg~i~~~Ef~ 81 (176)
T 1nya_A 2 TAIASDRLKKRFDRWDFDGNGALERADFEKEAQHIAEAFGKDAGAAEVQTLKNAFGGLFDYLAKEAGVGSDGSLTEEQFI 81 (176)
T ss_dssp CSHHHHHHHHHHHHCCSSCCSSBCSHHHHHHHHHHHHHTSSCSSSHHHHHHHHHHHHHHHHHHHHHTSCTTCCBCHHHHH
T ss_pred cHHHHHHHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHcCCCCCcHHHHHHHHHHHHHHHHHHHHhCCCCCCeEcHHHHH
Confidence 456788999999999999999999999999 688899999988887 6777777442 456555
Q ss_pred hcCCh-----H-------HHHHHHHHhhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHH
Q 042823 382 ENLPT-----K-------EKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFV 449 (477)
Q Consensus 382 ~~~~~-----~-------~~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~ 449 (477)
..+.. . ....++.+|+.+|.|++|.|+.+||+.++..+| +++++++.+++.+|.|++|.|+|+||+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~e~~~~l~~~g--~~~~~~~~~~~~~D~d~dg~i~~~ef~ 159 (176)
T 1nya_A 82 RVTENLIFEQGEASFNRVLGPVVKGIVGMCDKNADGQINADEFAAWLTALG--MSKAEAAEAFNQVDTNGNGELSLDELL 159 (176)
T ss_dssp HHHHHHHSSSCHHHHHHHHHHHHHHHHHHTCSSCCSEEEHHHHHHHHHHTT--CCHHHHHHHHHHHCTTCSSEEEHHHHH
T ss_pred HHHHHHhcCCchhhHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHhC--CCHHHHHHHHHHhCCCCCCCCcHHHHH
Confidence 43311 1 135689999999999999999999999999998 899999999999999999999999999
Q ss_pred HHHHhhh
Q 042823 450 NLMTDIY 456 (477)
Q Consensus 450 ~~~~~~~ 456 (477)
.++....
T Consensus 160 ~~~~~~~ 166 (176)
T 1nya_A 160 TAVRDFH 166 (176)
T ss_dssp HHHSCCS
T ss_pred HHHHHHh
Confidence 9997654
|
| >1q80_A SCP, sarcoplasmic calcium-binding protein; all-alpha, metal binding protein; NMR {Neanthes diversicolor} SCOP: a.39.1.5 PDB: 2scp_A | Back alignment and structure |
|---|
Probab=99.70 E-value=4.2e-17 Score=141.70 Aligned_cols=132 Identities=20% Similarity=0.268 Sum_probs=110.5
Q ss_pred chhhHHHHHHhhhcCCCCCCCccHHHHHHHHHhhC----CCCCHHH-HH--------HHHHHhhcc--chHHHHHhcCC-
Q 042823 322 DEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVG----SMLTEFD-VK--------HLMEAVKNS--STLESLCENLP- 385 (477)
Q Consensus 322 ~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~----~~~~~~~-~~--------~~~~~~d~~--~~~~~~~~~~~- 385 (477)
+++...++++|..+|.+++|.|+.+||..+++.++ ..++..+ +. .+++.+|++ .++.+|...+.
T Consensus 2 ~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~D~~g~i~~~EF~~~~~~ 81 (174)
T 1q80_A 2 DLWVQKMKTYFNRIDFDKDGAITRMDFESMAERFAKESEMKAEHAKVLMDSLTGVWDNFLTAVAGGKGIDETTFINSMKE 81 (174)
T ss_dssp HHHHHHHHHHHHHHCTTCSSEESHHHHHHHHHHHHHHSSCCTTHHHHHHHHHHHHHHHTGGGTTTTSCEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCCCCcEeHHHHHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHhcCCCCeEcHHHHHHHHHH
Confidence 45677899999999999999999999999999998 8888877 64 456666632 34666554332
Q ss_pred --------hHHHHHHHHHhhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhh
Q 042823 386 --------TKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDI 455 (477)
Q Consensus 386 --------~~~~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~ 455 (477)
......++.+|+.+|+|++|+|+.+||+.++..+| +++++++.+++.+|.|++|.|+|+||+.++...
T Consensus 82 ~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~g--~~~~~~~~~~~~~D~d~dg~i~~~ef~~~~~~~ 157 (174)
T 1q80_A 82 MVKNPEAKSVVEGPLPLFFRAVDTNEDNNISRDEYGIFFGMLG--LDKTMAPASFDAIDTNNDGLLSLEEFVIAGSDF 157 (174)
T ss_dssp HTTSTTCHHHHHTHHHHHHHHHCTTSSSSBCHHHHHHHHHHHT--CCGGGHHHHHHHHCTTCSSSBCHHHHHHHHHHH
T ss_pred HcCcccHHHHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHHcC--CCHHHHHHHHHHhCCCCCceEeHHHHHHHHHHH
Confidence 12346799999999999999999999999999997 778899999999999999999999999998754
|
| >2hpk_A Photoprotein berovin; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 2.00A {Beroe abyssicola} | Back alignment and structure |
|---|
Probab=99.70 E-value=8.9e-17 Score=144.16 Aligned_cols=138 Identities=19% Similarity=0.254 Sum_probs=111.6
Q ss_pred ccCCchhhHHHHHHhhhcCCCCCCCccHHHHHHHHHhhCC--CCCHHHHHHHH-------HHhhccc----hHHHHHhcC
Q 042823 318 EYLPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGS--MLTEFDVKHLM-------EAVKNSS----TLESLCENL 384 (477)
Q Consensus 318 ~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~--~~~~~~~~~~~-------~~~d~~~----~~~~~~~~~ 384 (477)
..++.++...+++.|..+|.+++|.|+.+||..+++.+|. .++..++..++ +.+|.++ ++.+|+..+
T Consensus 28 ~~l~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~l~~~~~~lf~~~D~d~dg~i~~~EF~~~~ 107 (208)
T 2hpk_A 28 EDLHPKMLSRLYKRFDTFDLDSDGKMEMDEVLYWPDRMRQLVNATDEQVEKMRDAVRVFFLHKGVEPVNGLLREDWVEAN 107 (208)
T ss_dssp --------CHHHHHHHHHCTTCSSEECHHHHTHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHTTCBTTTBEEGGGHHHHH
T ss_pred HHcCHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHhCCCCCCeEcHHHHHHHH
Confidence 4566777888999999999999999999999999999988 89999999999 8887543 344443322
Q ss_pred C--------------hHHHHH-HHHHhhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHH
Q 042823 385 P--------------TKEKQK-LMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFV 449 (477)
Q Consensus 385 ~--------------~~~~~~-l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~ 449 (477)
. ....++ ++.+|+.+|.|++|+|+.+||+.++..+| +++++++.+++.+|.|+||.|+|+||+
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~El~~~l~~~g--~~~~~~~~~~~~~D~d~dG~I~~~EF~ 185 (208)
T 2hpk_A 108 RVFAEAERERERRGEPSLIALLSNSYYDVLDDDGDGTVDVDELKTMMKAFD--VPQEAAYTFFEKADTDKSGKLERTELV 185 (208)
T ss_dssp HHHHHHHHHHHHTTCCCHHHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHTT--SCTTHHHHHHHHHCTTCCSSBCHHHHH
T ss_pred HHHhhhhhhhhccCChHHHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHhC--cCHHHHHHHHHHhCCCCCCcCcHHHHH
Confidence 1 122333 88999999999999999999999999999 888899999999999999999999999
Q ss_pred HHHHhhhC
Q 042823 450 NLMTDIYK 457 (477)
Q Consensus 450 ~~~~~~~~ 457 (477)
.++.....
T Consensus 186 ~~~~~~~~ 193 (208)
T 2hpk_A 186 HLFRKFWM 193 (208)
T ss_dssp HHHHHHHC
T ss_pred HHHHHHhc
Confidence 99987543
|
| >3akb_A Putative calcium binding protein; EF-hand, metal binding protein; 1.50A {Streptomyces coelicolor} PDB: 3aka_A | Back alignment and structure |
|---|
Probab=99.70 E-value=2e-16 Score=136.11 Aligned_cols=130 Identities=19% Similarity=0.307 Sum_probs=108.7
Q ss_pred hHHHHHHhhhcCCCCCCCccHHHHHHHH----HhhCCCCCHHHHHHH-----------HHHhhcc----chHHHHHhcCC
Q 042823 325 TQALKEKFIEMDTDKNGTLSYDELRAGL----TKVGSMLTEFDVKHL-----------MEAVKNS----STLESLCENLP 385 (477)
Q Consensus 325 ~~~l~~~F~~~D~~~~G~i~~~el~~~l----~~~~~~~~~~~~~~~-----------~~~~d~~----~~~~~~~~~~~ 385 (477)
...++.+|..+|.|++|.|+.+||..++ +.+|..++..++..+ ++.+|.+ .++.+|...+.
T Consensus 3 ~~~l~~~F~~~D~d~dG~i~~~E~~~~l~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~f~~~D~d~~g~i~~~ef~~~~~ 82 (166)
T 3akb_A 3 ERRIAARFTTFDQDGNGHIDRSDFSGAAKAMLAEFGVAARSDRGQALYGGAEALWQGLAGIADRDGDQRITREEFVTGAV 82 (166)
T ss_dssp HHHHHHHHHHHCTTCSSEECHHHHHHHHHHHHHHHTCCTTSHHHHHHHHHHHHHHHHHHHHHCTTSSSCEEHHHHHHTHH
T ss_pred HHHHHHHHhHHcCCCCCCcCHHHHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence 4678899999999999999999999975 456989988888765 5777643 24666665432
Q ss_pred hH-----------HHHHHHHHhhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHh
Q 042823 386 TK-----------EKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTD 454 (477)
Q Consensus 386 ~~-----------~~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~ 454 (477)
.. ....++.+|+.+|.|++|.|+.+||+.++..+| +++++++.+++.+|.|+||.|+|+||+.++..
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~E~~~~l~~~~--~~~~~~~~~~~~~D~d~dg~i~~~ef~~~~~~ 160 (166)
T 3akb_A 83 KRLRDKPDRFAEMARPFLHAALGVADTDGDGAVTVADTARALTAFG--VPEDLARQAAAALDTDGDGKVGETEIVPAFAR 160 (166)
T ss_dssp HHHHHSHHHHHHHHHHHHHHHHHHHCSSSSSCCBHHHHHHHHHHTT--CCHHHHHHHHHHHCTTCSSBCCHHHHHHHHHH
T ss_pred HHhccCccchHHHHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHhC--CCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence 21 123489999999999999999999999999998 89999999999999999999999999999976
Q ss_pred hh
Q 042823 455 IY 456 (477)
Q Consensus 455 ~~ 456 (477)
.+
T Consensus 161 ~~ 162 (166)
T 3akb_A 161 YF 162 (166)
T ss_dssp HT
T ss_pred Hh
Confidence 54
|
| >2jjz_A Ionized calcium-binding adapter molecule 2; EF-hand, actin crosslinking, ionized calciu binding adapter molecule 2, metal-binding protein; 2.15A {Homo sapiens} PDB: 2jjz_B 2vtg_A | Back alignment and structure |
|---|
Probab=99.70 E-value=1.1e-17 Score=141.80 Aligned_cols=113 Identities=17% Similarity=0.193 Sum_probs=91.3
Q ss_pred CCCHHHHHHHHHHhhccchHHHHHhcCChHHHHHHHHHhhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcC
Q 042823 358 MLTEFDVKHLMEAVKNSSTLESLCENLPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDI 437 (477)
Q Consensus 358 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~ 437 (477)
.+++.+++.++..++.+..+.++... .+..++++.+|+.||.|++|+|+.+||+.+|+.+|..+++++++.+++.+|.
T Consensus 20 ~~~~~~~~~i~~~~d~~~~~~~~~~l--~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~e~~~l~~~~D~ 97 (150)
T 2jjz_A 20 ARQERRLAEINREFLCDQKYSDEENL--PEKLTAFKEKYMEFDLNNEGEIDLMSLKRMMEKLGVPKTHLEMKKMISEVTG 97 (150)
T ss_dssp HHHHHHHHHHHHHHHTCGGGSSCTTH--HHHHHHHHHHHTTSCCCTTSSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHHT
T ss_pred CCcHHHHHHHHHHhccCCCchhhHhH--HHHHHHHHHHHHHhCCCCcCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHHCC
Confidence 45678899999999876653322221 5667899999999999999999999999999999999999999999999999
Q ss_pred CCCCcccHHHHHHHHHhhhCCCcHHHHHHHHHHhccCCCC
Q 042823 438 DGNGNIDSIEFVNLMTDIYKLETPELLEKAFQYLDKNSDQ 477 (477)
Q Consensus 438 ~~~g~i~~~eF~~~~~~~~~~~~~~~l~~aF~~~D~d~~G 477 (477)
+++|.|+|+||+.++... .+++..||+.||.|++|
T Consensus 98 d~dg~I~~~eF~~~~~~~-----~~~i~~aF~~~D~d~~G 132 (150)
T 2jjz_A 98 GVSDTISYRDFVNMMLGK-----RSAVLKLVMMFEGKANE 132 (150)
T ss_dssp TSCSSBCHHHHHHHHHSS-----SCCHHHHHHC-------
T ss_pred CCCCcEeHHHHHHHHHHh-----HHHHHHHHHHHcCCCCC
Confidence 999999999999999754 23599999999999998
|
| >2bec_A Calcineurin B homologous protein 2; calcineurin-homologous protein, calcium-binding protein, NHE1 regulating protein; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.69 E-value=5.7e-17 Score=144.71 Aligned_cols=132 Identities=19% Similarity=0.299 Sum_probs=114.5
Q ss_pred cCCchhhHHHHHHhhhcCCCCCCCccHHHHHHHHHhhCCCCCHHHHHHHHHHhhccc----hHHHHHhcC----------
Q 042823 319 YLPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNSS----TLESLCENL---------- 384 (477)
Q Consensus 319 ~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~----~~~~~~~~~---------- 384 (477)
.++.++...+++.|..+|.|++|.|+.+||..+ ..+|..++ +..++..+|.++ ++.+|+..+
T Consensus 22 ~ls~~~~~~l~~~F~~~D~d~dG~I~~~El~~~-~~lg~~~~---~~~l~~~~D~d~dg~i~~~EF~~~~~~~~~~~~~~ 97 (202)
T 2bec_A 22 GFSQASLLRLHHRFRALDRNKKGYLSRMDLQQI-GALAVNPL---GDRIIESFFPDGSQRVDFPGFVRVLAHFRPVEDED 97 (202)
T ss_dssp CCCHHHHHHHHHHHHHHCSSCSSCCCHHHHHTC-HHHHHSTT---HHHHHHTTSCSSCCCCCHHHHHHHHGGGSCCCHHH
T ss_pred CCCHHHHHHHHHHHHHHCCCCCCCcCHHHHHHH-HhcCCCcc---HHHHHHHhCCCCCCcCcHHHHHHHHHHhcccchhc
Confidence 457788889999999999999999999999998 88887665 888898887542 466665433
Q ss_pred -----------ChHHHHHHHHHhhhhcCCCCCCcCHHHHHHHHHHc-CCCCCHHHHHHHHHH----hcCCCCCcccHHHH
Q 042823 385 -----------PTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKL-GSALEESEVNQYMEA----GDIDGNGNIDSIEF 448 (477)
Q Consensus 385 -----------~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~-g~~~~~~~i~~~~~~----~d~~~~g~i~~~eF 448 (477)
.....+.++.+|+.||.|++|+|+.+||+.++..+ |..+++++++.+++. +|.|+||.|+|+||
T Consensus 98 ~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~g~~~~~~~~~~~~~~~~~~~D~d~dG~Is~~EF 177 (202)
T 2bec_A 98 TETQDPKKPEPLNSRRNKLHYAFQLYDLDRDGKISRHEMLQVLRLMVGVQVTEEQLENIADRTVQEADEDGDGAVSFVEF 177 (202)
T ss_dssp HC-----CCCCTTSHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHSCCSCCCHHHHHHHHHHHHHHHCSSCSSSEEHHHH
T ss_pred ccccccccccccccHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHcCCCCCCcCcHHHH
Confidence 23456789999999999999999999999999999 999999999999998 99999999999999
Q ss_pred HHHHHh
Q 042823 449 VNLMTD 454 (477)
Q Consensus 449 ~~~~~~ 454 (477)
+.++..
T Consensus 178 ~~~~~~ 183 (202)
T 2bec_A 178 TKSLEK 183 (202)
T ss_dssp HHTTTT
T ss_pred HHHHHH
Confidence 998864
|
| >3ll8_B Calcineurin subunit B type 1; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 1mf8_B* 2p6b_B 1aui_B 1m63_B* 1tco_B* | Back alignment and structure |
|---|
Probab=99.69 E-value=1.1e-16 Score=136.11 Aligned_cols=130 Identities=25% Similarity=0.434 Sum_probs=111.4
Q ss_pred chhhHHHHHHhhhcCCCCCCCccHHHHHHHHHhhCCCCCHHHHHHHHHHhhccc----hHHHHHhcCC-----hHHHHHH
Q 042823 322 DEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNSS----TLESLCENLP-----TKEKQKL 392 (477)
Q Consensus 322 ~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~----~~~~~~~~~~-----~~~~~~l 392 (477)
+++...+++.|..+|.+++|.|+.+|| ..+..++..+ ++..+++.+|.++ ++.+|...+. ....+.+
T Consensus 2 ~~~~~~l~~~F~~~D~d~~G~i~~~el-~~l~~~~~~~---~~~~~~~~~D~~~~g~i~~~ef~~~~~~~~~~~~~~~~~ 77 (155)
T 3ll8_B 2 ADEIKRLGKRFKKLDLDNSGSLSVEEF-MSLPELQQNP---LVQRVIDIFDTDGNGEVDFKEFIEGVSQFSVKGDKEQKL 77 (155)
T ss_dssp CHHHHHHHHHHHHHCTTCSSSBCHHHH-TTSGGGTTCT---THHHHHHHHCTTCSSSBCHHHHHHHHGGGCSSCCHHHHH
T ss_pred HHHHHHHHHHHHHhCcCCCCeEcHHHH-HHhhccccch---HHHHHHHHHCCCCCCcCcHHHHHHHHHHHcccCCHHHHH
Confidence 567788999999999999999999999 6777777655 7788888887543 4666655432 2455789
Q ss_pred HHHhhhhcCCCCCCcCHHHHHHHHHH-cCCCCCHHHHHHHHHH----hcCCCCCcccHHHHHHHHHhh
Q 042823 393 MEKFREMDTDNSDTLTLSELKAGLAK-LGSALEESEVNQYMEA----GDIDGNGNIDSIEFVNLMTDI 455 (477)
Q Consensus 393 ~~~F~~~D~~~~G~I~~~el~~~l~~-~g~~~~~~~i~~~~~~----~d~~~~g~i~~~eF~~~~~~~ 455 (477)
+.+|+.+|.|++|.|+.+||+.++.. +|..+++++++.+++. +|.|++|.|+|+||+.++...
T Consensus 78 ~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~~ 145 (155)
T 3ll8_B 78 RFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTIINADKDGDGRISFEEFCAVVGGL 145 (155)
T ss_dssp HHHHHHHCTTCSSCBCHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHCTTSSSSBCHHHHHHHHGGG
T ss_pred HHHHHHhCCCCCCcCcHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHhcc
Confidence 99999999999999999999999999 6999999999999998 999999999999999999754
|
| >1s6i_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5 | Back alignment and structure |
|---|
Probab=99.68 E-value=1e-17 Score=147.84 Aligned_cols=152 Identities=30% Similarity=0.476 Sum_probs=123.2
Q ss_pred cCCchhhHHHHHHhhhcCCCCCCCccHHHHHHHHHhhCCCCCHHHHHHHHHHhhcc----chHHHHHhcCCh----HHHH
Q 042823 319 YLPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNS----STLESLCENLPT----KEKQ 390 (477)
Q Consensus 319 ~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~----~~~~~~~~~~~~----~~~~ 390 (477)
.++.++...++++|..+|.+++|.|+.+||..++..+|..++..++..+++.+|.+ .++.+|+..+.. ...+
T Consensus 3 ~ls~~~~~~l~~~F~~~D~d~dG~I~~~E~~~~l~~~g~~~~~~~~~~l~~~~D~d~dG~I~~~EF~~~~~~~~~~~~~~ 82 (188)
T 1s6i_A 3 RLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTIDYGEFIAATVHLNKLEREE 82 (188)
T ss_dssp SSSCTTTCSHHHHHHTTSSSSSSCEEHHHHHHHHTTTTCCCCHHHHHHHHHHTCTTCSSEECHHHHHHHHTTSSSSCCCC
T ss_pred CCCHHHHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHcCCCCCCeEeHHHHHHHHHHHhccCHHH
Confidence 45667788899999999999999999999999999999999999999999999754 346666654321 1234
Q ss_pred HHHHHhhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhhhCC--CcHHHHHHHH
Q 042823 391 KLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIYKL--ETPELLEKAF 468 (477)
Q Consensus 391 ~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~--~~~~~l~~aF 468 (477)
.++.+|+.||.|++|+|+.+||+.++..+| +++++++.+++.+|.|+||.|+|+||+.++...... .....+..+|
T Consensus 83 ~l~~~F~~~D~d~dG~Is~~El~~~l~~~g--~~~~~~~~~~~~~D~d~dG~Is~~EF~~~~~~~~~~~~~~~~~~~~~~ 160 (188)
T 1s6i_A 83 NLVSAFSYFDKDGSGYITLDEIQQACKDFG--LDDIHIDDMIKEIDQDNDGQIDYGEFAAMMRKRKGNGGIGRRTMRKTL 160 (188)
T ss_dssp STHHHHHHTTTTCSSEEEHHHHHHTTTTTT--CCTTHHHHHHHHHCSSSSSEEETTHHHHTTSCCCSSTTCCSCTTSSSC
T ss_pred HHHHHHHHHCCCCCCcCcHHHHHHHHHHcC--CCHHHHHHHHHHHCCCCCCcEeHHHHHHHHHHcCCCCCccHhHhccCc
Confidence 688999999999999999999999999888 677899999999999999999999999998643321 2223344455
Q ss_pred HHhc
Q 042823 469 QYLD 472 (477)
Q Consensus 469 ~~~D 472 (477)
+.+|
T Consensus 161 ~~~~ 164 (188)
T 1s6i_A 161 NLRD 164 (188)
T ss_dssp CCCC
T ss_pred chhh
Confidence 5444
|
| >3sg6_A Gcamp2, myosin light chain kinase, green fluorescent PROT calmodulin chimera; calcium sensor, fluorescent protein; HET: CRO; 1.70A {Gallus gallus} PDB: 3evu_A* 3ek4_A* 3ek7_A* 3evv_A* 3ek8_A* 3ekh_A* 3sg2_A* 3sg3_A* 3sg7_A* 3ekj_A* 3sg4_A* 3sg5_A* 3evr_A* 3o78_A* 3o77_A* 1trf_A | Back alignment and structure |
|---|
Probab=99.68 E-value=1.9e-16 Score=155.29 Aligned_cols=136 Identities=28% Similarity=0.526 Sum_probs=119.8
Q ss_pred ccCCchhhHHHHHHhhhcCCCCCCCccHHHHHHHHHhhCCCCCHHHHHHHHHHhhccc----hHHHHHhcCC-----hHH
Q 042823 318 EYLPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNSS----TLESLCENLP-----TKE 388 (477)
Q Consensus 318 ~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~----~~~~~~~~~~-----~~~ 388 (477)
..++.++...++++|..+|.+++|.|+.+||..+|+.++..++..++..+++.+|.++ ++.+|...+. ...
T Consensus 304 ~~ls~eei~el~~~F~~fD~D~dG~Is~~EL~~~L~~lg~~~s~eel~~Lf~~~D~DgdG~IsfeEFl~ll~~~~~~~~~ 383 (450)
T 3sg6_A 304 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDS 383 (450)
T ss_dssp -CCCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHTTCTTSSSSEEHHHHHHHHHC------C
T ss_pred ccCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhccCCCCcccHHHHHHHHHhhccccch
Confidence 3456677889999999999999999999999999999999999999999999997543 4666665432 223
Q ss_pred HHHHHHHhhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHH
Q 042823 389 KQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMT 453 (477)
Q Consensus 389 ~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~ 453 (477)
.+.++.+|+.+|.|++|+|+.+||+.+|+.+|..+++++++.++..+|.|+||.|+|+||+.++.
T Consensus 384 ~e~l~~aFk~fD~D~dG~Is~eELr~~L~~lG~~ls~eei~~Lf~~~D~D~DG~IsfdEFv~~L~ 448 (450)
T 3sg6_A 384 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMT 448 (450)
T ss_dssp HHHHHHHHHHHCTTCSSEECHHHHHHHHHHHTCCCCHHHHHHHHHHHCTTSSSSEEHHHHHHHHC
T ss_pred hhHHHHHHHHhCCCCCCeEeHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHh
Confidence 56799999999999999999999999999999999999999999999999999999999999885
|
| >2sas_A Sarcoplasmic calcium-binding protein; 2.40A {Branchiostoma lanceolatum} SCOP: a.39.1.5 | Back alignment and structure |
|---|
Probab=99.67 E-value=1.5e-16 Score=139.49 Aligned_cols=135 Identities=16% Similarity=0.208 Sum_probs=113.1
Q ss_pred CCchhhHHHHHHhhhc-CCCCCCCccHHHHHHHHHhhC----CCCCHHHHHHH-----------HHHhhccc----hHHH
Q 042823 320 LPDEETQALKEKFIEM-DTDKNGTLSYDELRAGLTKVG----SMLTEFDVKHL-----------MEAVKNSS----TLES 379 (477)
Q Consensus 320 ~~~~~~~~l~~~F~~~-D~~~~G~i~~~el~~~l~~~~----~~~~~~~~~~~-----------~~~~d~~~----~~~~ 379 (477)
++++....++.+|..+ |.|++|.|+.+||..++..++ ..++..++..+ ++.+|.++ ++.+
T Consensus 2 ls~~~~~~l~~~F~~~~D~d~dG~i~~~E~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~f~~~D~d~dG~I~~~E 81 (185)
T 2sas_A 2 LNDFQKQKIKFTFDFFLDMNHDGSIQDNDFEDMMTRYKEVNKGSLSDADYKSMQASLEDEWRDLKGRADINKDDVVSWEE 81 (185)
T ss_dssp CCHHHHHHHHHHHHHHTCTTCSSEECHHHHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHHHCTTCSSCEEHHH
T ss_pred cCHHHHHHHHHHHHHheeCCCCCeEcHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEcHHH
Confidence 3556778899999999 999999999999999999998 88888888765 78877543 4555
Q ss_pred HHhcCC-------------hHHHHHHHHHhhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHH
Q 042823 380 LCENLP-------------TKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSI 446 (477)
Q Consensus 380 ~~~~~~-------------~~~~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~ 446 (477)
|...+. ......++.+|+.+|.|++|.|+.+||..+++.+| ++++++..+++.+|.|+||.|+|+
T Consensus 82 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~E~~~~l~~~g--~~~~~~~~~~~~~D~d~dG~i~~~ 159 (185)
T 2sas_A 82 YLAMWEKTIATCKSVADLPAWCQNRIPFLFKGMDVSGDGIVDLEEFQNYCKNFQ--LQCADVPAVYNVITDGGKVTFDLN 159 (185)
T ss_dssp HHHHHHHHHHTCCSGGGSCTTHHHHHHHHHHHHCTTSSSCCCHHHHHHHTTSSC--CCCSSHHHHHHHHHTTTTSCCSHH
T ss_pred HHHHHHHHhccccchhhhhHHHHHHHHHHHHHHcCCCCCeEcHHHHHHHHHHhC--CCHHHHHHHHHHhcCCCCCcCcHH
Confidence 544332 12346789999999999999999999999999888 567889999999999999999999
Q ss_pred HHHHHHHhhh
Q 042823 447 EFVNLMTDIY 456 (477)
Q Consensus 447 eF~~~~~~~~ 456 (477)
||+.++....
T Consensus 160 ef~~~~~~~~ 169 (185)
T 2sas_A 160 RYKELYYRLL 169 (185)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 9999987654
|
| >3cs1_A Flagellar calcium-binding protein; myristoylated, palmitoylated, SEN membrane targeting, EF-hand, cell projection, cilium; 2.00A {Trypanosoma cruzi} | Back alignment and structure |
|---|
Probab=99.67 E-value=1.2e-16 Score=144.53 Aligned_cols=139 Identities=20% Similarity=0.247 Sum_probs=113.5
Q ss_pred hhccCCchhhHHHHHHhhhcCCCCCCCccHHHHHHHHHh-hCCCCCHHHHHHHHHH-----------hhccc--hHHHHH
Q 042823 316 IVEYLPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTK-VGSMLTEFDVKHLMEA-----------VKNSS--TLESLC 381 (477)
Q Consensus 316 i~~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~-~~~~~~~~~~~~~~~~-----------~d~~~--~~~~~~ 381 (477)
+...++.++...++..|..+|.+++|.|+.+||..++.. +|..++..++..++.. .++++ ++.+|+
T Consensus 38 ~~~~ls~~~~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~I~~~EF~ 117 (219)
T 3cs1_A 38 IPREKTAEAKQRRIELFKKFDKNETGKLCYDEVYSGCLEVLKLDEFTSRVRDITKRAFDKSRTLGSKLENKGSEDFVEFL 117 (219)
T ss_dssp SCCSSSHHHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHTTCGGGTCSCHHHHHHHHHHHHHHHHHHHHTSCCCSSBCHH
T ss_pred hcccCCHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHhhhhccCCCCcCCHHHHH
Confidence 445667888999999999999999999999999999988 7887777666665542 24332 333333
Q ss_pred hcC---C-hHHHHHHHHHhhhhcCCCCCCcCHHHHHHHHHHcCC-CCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHh
Q 042823 382 ENL---P-TKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGS-ALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTD 454 (477)
Q Consensus 382 ~~~---~-~~~~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~-~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~ 454 (477)
..+ . ....+.++.+|+.||.|++|+|+.+||+.++..+|. .+++++++.+++.+|.|+||.|+|+||+.++..
T Consensus 118 ~~~~~~~~~~~~~~l~~~F~~~D~d~~G~Is~~El~~~l~~~g~~~~~~~e~~~l~~~~D~d~dG~I~~~EF~~~~~~ 195 (219)
T 3cs1_A 118 EFRLMLCYIYDFFELTVMFDEIDASGNMLVDEEEFKRAVPKLEAWGAKVEDPAALFKELDKNGTGSVTFDEFAAWASA 195 (219)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCSSSSSEEEHHHHHHHHHHHHHHTCCCSCHHHHHHHHCTTSSSEEEHHHHHHHHHH
T ss_pred HHHHHHhccchHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhcccCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHH
Confidence 221 1 123467999999999999999999999999999987 788889999999999999999999999999875
|
| >3a8r_A Putative uncharacterized protein; EF-hand, membrane, oxidoreductase, transmembrane, calcium BI protein; 2.40A {Oryza sativa japonica group} | Back alignment and structure |
|---|
Probab=99.67 E-value=1.8e-16 Score=138.34 Aligned_cols=130 Identities=18% Similarity=0.225 Sum_probs=106.4
Q ss_pred CchhhHHHHHHhhhcCCCCCCCccHHHHHHHHHhhCCCCCHHHHHHHHHHhhc-----c--chHHHHH---hcCC-hHHH
Q 042823 321 PDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKN-----S--STLESLC---ENLP-TKEK 389 (477)
Q Consensus 321 ~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~-----~--~~~~~~~---~~~~-~~~~ 389 (477)
...+...+++.|..+| ++|.|+.+||..+ +|..+++..+..+++.++. + .++.+|. ..+. ....
T Consensus 23 ~~~~~~~~~~~F~~~D--~dG~I~~~el~~~---lg~~~~~~~~~~i~~~~d~~~~~~~~~i~~~ef~~~~~~~~~~~~~ 97 (179)
T 3a8r_A 23 GNDGWAAVEKRFNQLQ--VDGVLLRSRFGKC---IGMDGSDEFAVQMFDSLARKRGIVKQVLTKDELKDFYEQLTDQGFD 97 (179)
T ss_dssp CCCCHHHHHHHHHHHC--BTTBEEGGGHHHH---HTCCSCHHHHHHHHHHHHHHHTCCSSEECHHHHHHHHHHHHCCCHH
T ss_pred chhhHHHHHHHHhccC--CCCCCcHHHHHHH---HCCCCcHHHHHHHHHHHHHhccCCCCCcCHHHHHHHHHHHcCCCHH
Confidence 3356778899999999 8999999999975 4778888888888887762 1 2344433 2222 2456
Q ss_pred HHHHHHhhhhcCCCCCCcCHHHHHHHHH-HcCCC-C------CHHHHHHHHHHhcCCCCCcccHHHHHHHHHhh
Q 042823 390 QKLMEKFREMDTDNSDTLTLSELKAGLA-KLGSA-L------EESEVNQYMEAGDIDGNGNIDSIEFVNLMTDI 455 (477)
Q Consensus 390 ~~l~~~F~~~D~~~~G~I~~~el~~~l~-~~g~~-~------~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~ 455 (477)
++++.+|+.||+|++|+|+.+||+.+|+ .+|.. + ++++++.+++.+|.|+||.|+|+||+.++...
T Consensus 98 ~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~D~d~dG~I~~~EF~~~~~~~ 171 (179)
T 3a8r_A 98 NRLRTFFDMVDKNADGRLTAEEVKEIIALSASANKLSKIKERADEYTALIMEELDPTNLGYIEMEDLEALLLQS 171 (179)
T ss_dssp HHHHHHHHHHCTTCSSCBCHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHSTTCCSEECHHHHHHHHC--
T ss_pred HHHHHHHHHHCCCCCCcCCHHHHHHHHHHHhccccccccccchHHHHHHHHHHhCCCCCCcCcHHHHHHHHHhC
Confidence 7899999999999999999999999999 88877 6 88999999999999999999999999998653
|
| >2lhi_A Calmodulin, serine/threonine-protein phosphatase catalytic subunit A1; yeast calmodulin, CNA1, metal binding protein; NMR {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.66 E-value=7.2e-17 Score=140.54 Aligned_cols=96 Identities=35% Similarity=0.512 Sum_probs=88.5
Q ss_pred hcCChHHHHHHHHHhhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhhhC-CCc
Q 042823 382 ENLPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIYK-LET 460 (477)
Q Consensus 382 ~~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~~~-~~~ 460 (477)
..|+++++++++++|+.||+|++|.|+.+||+.+|+.+|..+++.++..++..+|.+++|.|+|.||+.++..... ...
T Consensus 3 ~~Lt~eqi~elk~~F~~~D~d~dG~I~~~El~~~l~~lg~~~~~~~~~~~~~~~d~d~~~~i~~~ef~~~~~~~~~~~~~ 82 (176)
T 2lhi_A 3 SNLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLALMSRQLKSNDS 82 (176)
T ss_dssp CCCCTTGGGHHHHHHHTTCSSCSSCBCHHHHHHHHHHHTCCCCHHHHHHHHTTTCSSCSSSBCTTHHHHHHTSSCCSSHH
T ss_pred CcCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHcCCChhHHHHHHHHHHhCcCCCccchHHHHHHHHHHhcccCCc
Confidence 4578889999999999999999999999999999999999999999999999999999999999999998876544 335
Q ss_pred HHHHHHHHHHhccCCCC
Q 042823 461 PELLEKAFQYLDKNSDQ 477 (477)
Q Consensus 461 ~~~l~~aF~~~D~d~~G 477 (477)
+++++.||+.||+|++|
T Consensus 83 ~~~l~~aF~~fD~d~~G 99 (176)
T 2lhi_A 83 EQELLEAFKVFDKNGDG 99 (176)
T ss_dssp HHHHHHHHHHHCSSCSS
T ss_pred HHHHHHHHHHhCCCCCC
Confidence 67899999999999998
|
| >3u0k_A Rcamp; fluorescent protein, calcium binding, EF-hand, genetically E calcium indicator; HET: NFA CRK; 2.10A {Entacmaea quadricolor} | Back alignment and structure |
|---|
Probab=99.66 E-value=1.7e-16 Score=151.82 Aligned_cols=96 Identities=29% Similarity=0.481 Sum_probs=86.9
Q ss_pred hcCChHHHHHHHHHhhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhhhC-CCc
Q 042823 382 ENLPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIYK-LET 460 (477)
Q Consensus 382 ~~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~~~-~~~ 460 (477)
+.++.+++++++++|+.||+|++|.|+.+||+.+|+.+|..+++++++++++.+|.|++|.|+|+||+.++..... ...
T Consensus 294 E~Lt~EEI~ELREaF~~fDkDgdG~IS~eELk~aLrsLG~~~TeeEI~~Lf~~~D~DgDG~IdFeEFl~lms~~lk~~d~ 373 (440)
T 3u0k_A 294 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLIMMARKMKDTDS 373 (440)
T ss_dssp BCCCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCSSCSSSEEHHHHHHHHHTC------
T ss_pred hhhhHHHHHHHHHHHHHHcCCCCCEECHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhcCCCh
Confidence 5788899999999999999999999999999999999999999999999999999999999999999999876544 345
Q ss_pred HHHHHHHHHHhccCCCC
Q 042823 461 PELLEKAFQYLDKNSDQ 477 (477)
Q Consensus 461 ~~~l~~aF~~~D~d~~G 477 (477)
++++++||+.||+|++|
T Consensus 374 eeeLreAFk~fDkDgdG 390 (440)
T 3u0k_A 374 EEEIREAFRVFDKDGNG 390 (440)
T ss_dssp CHHHHHHHHHHCTTCSS
T ss_pred HHHHHHHHHHHCCCCcC
Confidence 57899999999999998
|
| >2lmt_A Calmodulin-related protein 97A; spermatogenesis, metal binding protein; NMR {Drosophila melanogaster} PDB: 2lmu_A 2lmv_A | Back alignment and structure |
|---|
Probab=99.65 E-value=2.2e-16 Score=133.44 Aligned_cols=96 Identities=21% Similarity=0.442 Sum_probs=89.0
Q ss_pred hcCChHHHHHHHHHhhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhhhC-CCc
Q 042823 382 ENLPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIYK-LET 460 (477)
Q Consensus 382 ~~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~~~-~~~ 460 (477)
+.++++++++++++|+.||+|++|.|+.+||+.+++.+|..++++++..++..+|.+++|.|+|.||+..+..... ...
T Consensus 2 s~lt~eqi~el~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~ 81 (148)
T 2lmt_A 2 SELTEEQIAEFKDAFVQFDKEGTGKIATRELGTLMRTLGQNPTEAELQDLIAEAENNNNGQLNFTEFCGIMAKQMRETDT 81 (148)
T ss_dssp CSCCSHHHHHHHHHHHHHHCSSCCEEEGGGHHHHHHHHTCCCCHHHHHHHHHHHHTTSTTEEEHHHHHHHHHHTTTTTTT
T ss_pred CCCCHHHHHHHHHHHHHHcCCCCCeECHHHHHHHHHhcCCCchHHHHHHHHHhcccCCCCcccHHHHHHHHHHHhcccCc
Confidence 3578899999999999999999999999999999999999999999999999999999999999999998876544 456
Q ss_pred HHHHHHHHHHhccCCCC
Q 042823 461 PELLEKAFQYLDKNSDQ 477 (477)
Q Consensus 461 ~~~l~~aF~~~D~d~~G 477 (477)
+++++.||+.||+|++|
T Consensus 82 ~~~l~~aF~~~D~d~~G 98 (148)
T 2lmt_A 82 EEEMREAFKIFDRDGDG 98 (148)
T ss_dssp HHHHHHHHHHHHSSCSS
T ss_pred HHHHHHHHHHHCCCCcC
Confidence 78899999999999998
|
| >2obh_A Centrin-2; DNA repair complex EF hand superfamily protein-peptide compl cycle; 1.80A {Homo sapiens} SCOP: a.39.1.5 PDB: 3kf9_A 1m39_A 2a4j_A 2k2i_A 1oqp_A | Back alignment and structure |
|---|
Probab=99.65 E-value=2.1e-16 Score=132.79 Aligned_cols=92 Identities=27% Similarity=0.471 Sum_probs=83.3
Q ss_pred hHHHHHHHHHhhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhhhC-CCcHHHH
Q 042823 386 TKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIYK-LETPELL 464 (477)
Q Consensus 386 ~~~~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~~~-~~~~~~l 464 (477)
++++++++++|+.||+|++|.|+.+||+.+|+.+|..+++.++..+++.+|.+++|.|+|+||+.++..... ..+.+++
T Consensus 2 ~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~l 81 (143)
T 2obh_A 2 EEQKQEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNFGDFLTVMTQKMSEKDTKEEI 81 (143)
T ss_dssp HHHHHHHHHHHHTTCTTCCSEEEGGGHHHHHHHTTCCCCHHHHHHHHHHHTTTCCSEEEHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeeeHHHHHHHHHHHhccccHHHHH
Confidence 456789999999999999999999999999999999999999999999999999999999999998875432 2345789
Q ss_pred HHHHHHhccCCCC
Q 042823 465 EKAFQYLDKNSDQ 477 (477)
Q Consensus 465 ~~aF~~~D~d~~G 477 (477)
+.||+.||+|++|
T Consensus 82 ~~~F~~~D~d~~G 94 (143)
T 2obh_A 82 LKAFKLFDDDETG 94 (143)
T ss_dssp HHHHHHHCTTCSS
T ss_pred HHHHHHhCCCCCC
Confidence 9999999999998
|
| >3i5g_C Myosin catalytic light chain LC-1, mantle muscle; rigor-like, squid, muscle myosin, contractIle protein; 2.60A {Todarodes pacificus} PDB: 3i5f_C 3i5h_C 3i5i_C | Back alignment and structure |
|---|
Probab=99.65 E-value=1.2e-16 Score=136.52 Aligned_cols=94 Identities=17% Similarity=0.207 Sum_probs=84.4
Q ss_pred cCChHHHHHHHHHhhhhcC--CCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhhhC---
Q 042823 383 NLPTKEKQKLMEKFREMDT--DNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIYK--- 457 (477)
Q Consensus 383 ~~~~~~~~~l~~~F~~~D~--~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~~~--- 457 (477)
.|+++++++++++|+.||. |++|+|+.+||+.+|+++|..++++++..++. .|.+++|.|+|+||+.++.....
T Consensus 2 qLt~eqi~elre~F~~fD~~~d~dG~I~~~El~~~lr~lG~~~t~~el~~~~~-~d~~~~g~i~f~eFl~~~~~~~~~~~ 80 (159)
T 3i5g_C 2 QLTKDEIEEVREVFDLFDFWDGRDGDVDAAKVGDLLRCLGMNPTEAQVHQHGG-TKKMGEKAYKLEEILPIYEEMSSKDT 80 (159)
T ss_dssp CCCHHHHHHHHHHHHHHHHHTTSSSCEEGGGHHHHHHHTTCCCCHHHHHTTTC-CSSTTSCEECHHHHHHHHHHHTTCCT
T ss_pred CCCHHHHHHHHHHHHHHCcCCCCCCeECHHHHHHHHHHcCCCCCHHHHHHHHc-ccccCCCcccHHHHHHHHHHhhcccc
Confidence 5788999999999999995 89999999999999999999999999999865 57788999999999999876544
Q ss_pred CCcHHHHHHHHHHhccCCCC
Q 042823 458 LETPELLEKAFQYLDKNSDQ 477 (477)
Q Consensus 458 ~~~~~~l~~aF~~~D~d~~G 477 (477)
....++++.||+.||+|++|
T Consensus 81 ~~~~~~l~~aF~~fD~d~~G 100 (159)
T 3i5g_C 81 GTAADEFMEAFKTFDREGQG 100 (159)
T ss_dssp TCCHHHHHHHHHHHCTTSSS
T ss_pred cchHHHHHHHHHHHhcCCCC
Confidence 34568899999999999998
|
| >1bjf_A Neurocalcin delta; calcium-binding, myristoylation, neuronal specific guanylate cyclase activator; 2.40A {Bos taurus} SCOP: a.39.1.5 | Back alignment and structure |
|---|
Probab=99.65 E-value=4.6e-16 Score=137.62 Aligned_cols=145 Identities=16% Similarity=0.198 Sum_probs=111.6
Q ss_pred HHHHHHhhhcCCC-CCCCccHHHHHHHHHhhCCCC-CHHHHHHHHHHhhccc----hHHHHHhcCC----hHHHHHHHHH
Q 042823 326 QALKEKFIEMDTD-KNGTLSYDELRAGLTKVGSML-TEFDVKHLMEAVKNSS----TLESLCENLP----TKEKQKLMEK 395 (477)
Q Consensus 326 ~~l~~~F~~~D~~-~~G~i~~~el~~~l~~~~~~~-~~~~~~~~~~~~d~~~----~~~~~~~~~~----~~~~~~l~~~ 395 (477)
.++.++|..+|.+ ++|.|+.+||..+++.++..+ +...+..+++.+|.++ ++.+|...+. ....+.++.+
T Consensus 25 ~~i~~~f~~fd~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~g~i~~~Ef~~~~~~~~~~~~~~~~~~~ 104 (193)
T 1bjf_A 25 HEIQEWYKGFLRDCPSGHLSMEEFKKIYGNFFPYGDASKFAEHVFRTFDANGDGTIDFREFIIALSVTSRGKLEQKLKWA 104 (193)
T ss_dssp HHHHHHHHHHHHHSTTSEEEHHHHHHHHTTTSSSSCCHHHHHHHHHHHCSSCSSEEEHHHHHHHHHHHTSSCHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCCCcCHHHHHHHHHHhcCcCChHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHcCCCHHHHHHHH
Confidence 4566778888888 899999999999999987655 4677899999998543 4666554332 2345688999
Q ss_pred hhhhcCCCCCCcCHHHHHHHHHHc----C--CCCC------HHHHHHHHHHhcCCCCCcccHHHHHHHHHhhhCCCcHHH
Q 042823 396 FREMDTDNSDTLTLSELKAGLAKL----G--SALE------ESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIYKLETPEL 463 (477)
Q Consensus 396 F~~~D~~~~G~I~~~el~~~l~~~----g--~~~~------~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~ 463 (477)
|+.+|.|++|.|+.+||..++..+ | ..++ +.++..+++.+|.|++|.|+++||+.++.. .++
T Consensus 105 f~~~D~d~~G~I~~~E~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~------~~~ 178 (193)
T 1bjf_A 105 FSMYDLDGNGYISKAEMLEIVQAIYKMVSSVMKMPEDESTPEKRTEKIFRQMDTNRDGKLSLEEFIRGAKS------DPS 178 (193)
T ss_dssp HHHHCTTCSSCEEHHHHHHHHHHHHTTCCCTTTSCGGGSSHHHHHHHHHHHSCTTCSSEECHHHHHHHHHH------CTH
T ss_pred HhhcCCCCCCeECHHHHHHHHHHHHHHhccccCCCcccccHHHHHHHHHHHhCCCCCCeEeHHHHHHHHhc------CHH
Confidence 999999999999999999999774 5 2343 355999999999999999999999999863 236
Q ss_pred HHHHHHHhccCCCC
Q 042823 464 LEKAFQYLDKNSDQ 477 (477)
Q Consensus 464 l~~aF~~~D~d~~G 477 (477)
+...| .+|+|+||
T Consensus 179 ~~~~~-~~D~~~dG 191 (193)
T 1bjf_A 179 IVRLL-QCDPSSAG 191 (193)
T ss_dssp HHHTT-CC------
T ss_pred HHHHh-ccCCCCCC
Confidence 88899 99999998
|
| >1s6c_A KV4 potassium channel-interacting protein kchip1B; EF-hand, transport protein; 2.00A {Rattus norvegicus} SCOP: a.39.1.5 PDB: 2nz0_A 2i2r_E | Back alignment and structure |
|---|
Probab=99.65 E-value=9.8e-16 Score=134.30 Aligned_cols=147 Identities=15% Similarity=0.206 Sum_probs=115.3
Q ss_pred cCCchhhHHHHHHhhhcCCCCCCCccHHHHHHHHHhhCCC-CCHHHHHHHHHHhhccc----hHHHHHhcCCh----HHH
Q 042823 319 YLPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSM-LTEFDVKHLMEAVKNSS----TLESLCENLPT----KEK 389 (477)
Q Consensus 319 ~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~-~~~~~~~~~~~~~d~~~----~~~~~~~~~~~----~~~ 389 (477)
.++.++...+.+.|... |++|.|+.+||..+++.++.. ++..++..+++.+|.++ ++.+|...+.. ...
T Consensus 14 ~~s~~~i~~l~~~fd~~--d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~g~i~~~Ef~~~~~~~~~~~~~ 91 (183)
T 1s6c_A 14 NFTKRELQVLYRGFKNE--XPSGVVNEETFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVKFEDFVTALSILLRGTVH 91 (183)
T ss_dssp SCCHHHHHHHHHHHHHH--CTTSEECHHHHHHHHHHHSTTSCCHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHHCCHH
T ss_pred CCCHHHHHHHHHHHHHh--CCCCcCCHHHHHHHHHHHcCCCChHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHHcCCCHH
Confidence 34555655555555553 789999999999999999865 78999999999998543 46666554421 234
Q ss_pred HHHHHHhhhhcCCCCCCcCHHHHHHHHHHc----CCC----CC----HHHHHHHHHHhcCCCCCcccHHHHHHHHHhhhC
Q 042823 390 QKLMEKFREMDTDNSDTLTLSELKAGLAKL----GSA----LE----ESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIYK 457 (477)
Q Consensus 390 ~~l~~~F~~~D~~~~G~I~~~el~~~l~~~----g~~----~~----~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~~~ 457 (477)
+.++.+|+.+|.|++|+|+.+||..++..+ |.. ++ ++++..+++.+|.|++|.|+|+||+.++....
T Consensus 92 ~~~~~~f~~~D~d~~G~i~~~e~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~i~~~Ef~~~~~~~~- 170 (183)
T 1s6c_A 92 EKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGIVTLDEFLESXQEDD- 170 (183)
T ss_dssp HHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHHHTC-----------CHHHHHHHHHHHCTTCSSEECHHHHHHHTTSCC-
T ss_pred HHHHHHHHHhCCCCCCeEcHHHHHHHHHHHHHHhccccCcCccHHHHHHHHHHHHHHhCCCCCCcEeHHHHHHHHhcCh-
Confidence 688999999999999999999999999886 643 33 38899999999999999999999999886432
Q ss_pred CCcHHHHHHHHHHhcc
Q 042823 458 LETPELLEKAFQYLDK 473 (477)
Q Consensus 458 ~~~~~~l~~aF~~~D~ 473 (477)
.+..+|..||.
T Consensus 171 -----~~~~~l~~~d~ 181 (183)
T 1s6c_A 171 -----NIMRSLQLFQN 181 (183)
T ss_dssp -----HHHHHHHHHHH
T ss_pred -----HHHHHHHHhhc
Confidence 58888888874
|
| >2ct9_A Calcium-binding protein P22; EF-hand, metal binding protein; 2.20A {Rattus norvegicus} PDB: 2e30_A | Back alignment and structure |
|---|
Probab=99.64 E-value=2.3e-16 Score=141.52 Aligned_cols=134 Identities=21% Similarity=0.354 Sum_probs=111.0
Q ss_pred ccCCchhhHHHHHHhhhcCCCCCCCccHHHHHHHHHhhCCCCCHHHHHHHHHHhhcc----chHHHHHhcCCh-------
Q 042823 318 EYLPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNS----STLESLCENLPT------- 386 (477)
Q Consensus 318 ~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~----~~~~~~~~~~~~------- 386 (477)
..++.++...+++.|..+|.|++|.|+.+||..+ ..+|..++.. ++++.+|.+ .++.+|+..+..
T Consensus 21 ~~ls~~~~~~l~~~F~~~D~d~dG~Is~~El~~~-~~lg~~~~~~---~l~~~~d~~~~g~i~~~EF~~~~~~~~~~~~~ 96 (208)
T 2ct9_A 21 TGFSHSQITRLYSRFTSLDKGENGTLSREDFQRI-PELAINPLGD---RIINAFFSEGEDQVNFRGFMRTLAHFRPIEDN 96 (208)
T ss_dssp HCCCHHHHHHHHHHHHHHCTTCSSEECTGGGGGC-HHHHTSTTHH---HHHHTTSCTTCSCEEHHHHHHHHHTTSCCC--
T ss_pred CCCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHH-HHcCCCCcHH---HHHHHHcCCCCCcCcHHHHHHHHHhhccccch
Confidence 3457788889999999999999999999999885 4778777654 456666643 346666543211
Q ss_pred -------------HHHHHHHHHhhhhcCCCCCCcCHHHHHHHHHHc-CCCCCHHHHHHH----HHHhcCCCCCcccHHHH
Q 042823 387 -------------KEKQKLMEKFREMDTDNSDTLTLSELKAGLAKL-GSALEESEVNQY----MEAGDIDGNGNIDSIEF 448 (477)
Q Consensus 387 -------------~~~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~-g~~~~~~~i~~~----~~~~d~~~~g~i~~~eF 448 (477)
...+.++.+|+.||.|++|+|+.+||+.++..+ |..+++++++.+ ++.+|.|+||.|+|+||
T Consensus 97 ~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~g~~~s~~~~~~l~~~~~~~~D~d~dG~Is~~EF 176 (208)
T 2ct9_A 97 EKSKDVNGPEPLNSRSNKLHFAFRLYDLDKDDKISRDELLQVLRMMVGVNISDEQLGSIADRTIQEADQDGDSAISFTEF 176 (208)
T ss_dssp ---------CCTTSHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHSCTTCCHHHHHHHHHHHHHHHCSSSSSSEEHHHH
T ss_pred hhhcccccccccccHHHHHHHHHHHHCCCCCCEEcHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHhCCCCCCcCcHHHH
Confidence 156789999999999999999999999999996 999999999888 99999999999999999
Q ss_pred HHHHHhh
Q 042823 449 VNLMTDI 455 (477)
Q Consensus 449 ~~~~~~~ 455 (477)
+.++...
T Consensus 177 ~~~~~~~ 183 (208)
T 2ct9_A 177 VKVLEKV 183 (208)
T ss_dssp HHTTTTS
T ss_pred HHHHhcc
Confidence 9988653
|
| >3dd4_A KV channel-interacting protein 4; EF-hands protein, ION transport, ionic channel, membrane, PO potassium channel, potassium transport, transport; 3.00A {Mus musculus} PDB: 2e6w_A | Back alignment and structure |
|---|
Probab=99.64 E-value=1.1e-15 Score=139.27 Aligned_cols=145 Identities=15% Similarity=0.214 Sum_probs=115.9
Q ss_pred CchhhHHHHHHhhhcCCCCCCCccHHHHHHHHHhh-CCCCCHHHHHHHHHHhhccc----hHHHHHhcCCh----HHHHH
Q 042823 321 PDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKV-GSMLTEFDVKHLMEAVKNSS----TLESLCENLPT----KEKQK 391 (477)
Q Consensus 321 ~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~-~~~~~~~~~~~~~~~~d~~~----~~~~~~~~~~~----~~~~~ 391 (477)
+.++...+...|.. .+++|.|+.+||..++..+ +...+...+..+++.+|.++ ++.+|...+.. ...+.
T Consensus 62 s~~ei~~l~~~F~~--~d~~G~Is~~ef~~~l~~~~~~~~~~~~~~~lf~~~D~d~~G~I~~~Ef~~~l~~~~~~~~~~~ 139 (229)
T 3dd4_A 62 TKKELQILYRGFKN--ECPSGVVNEETFKEIYSQFFPQGDSTTYAHFLFNAFDTDHNGAVSFEDFIKGLSILLRGTVQEK 139 (229)
T ss_dssp HHHHHHHHHHHHHT--TCCSCCCCHHHHHHHHHHHSCSSSHHHHHHHHHHTTCSSCCSSCCHHHHHHHHHHHHHSCHHHH
T ss_pred CHHHHHHHHHHHHh--hCCCCCcCHHHHHHHHHHHCCCCCcHHHHHHHHHHcCCCCCCeEeHHHHHHHHHHHcCCChHHH
Confidence 44566667777765 6788999999999999986 44566777889999998543 46666554421 23468
Q ss_pred HHHHhhhhcCCCCCCcCHHHHHHHHHHc------------CCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhhhCCC
Q 042823 392 LMEKFREMDTDNSDTLTLSELKAGLAKL------------GSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIYKLE 459 (477)
Q Consensus 392 l~~~F~~~D~~~~G~I~~~el~~~l~~~------------g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~~ 459 (477)
++.+|+.||.|++|+|+.+||..++..+ |...++++++.+++.+|.|+||.|+|+||+.++...
T Consensus 140 l~~~F~~~D~d~dG~Is~~E~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~Is~~EF~~~~~~~---- 215 (229)
T 3dd4_A 140 LNWAFNLYDINKDGYITKEEMLDIMKAIYDMMGKCTYPVLKEDAPRQHVETFFQKMDKNKDGVVTIDEFIESCQKD---- 215 (229)
T ss_dssp HHHHHHHHCTTCSSCCBHHHHHHHHHHHHHHCC-----------CCTHHHHHHHHHCSSCSSBCCHHHHHHHHHTC----
T ss_pred HHHHHHHhCCCCCCeECHHHHHHHHHHHHHHhccccCCCcchhhHHHHHHHHHHHhcCCCCCcEeHHHHHHHHHhC----
Confidence 9999999999999999999999999886 567788899999999999999999999999999752
Q ss_pred cHHHHHHHHHHhcc
Q 042823 460 TPELLEKAFQYLDK 473 (477)
Q Consensus 460 ~~~~l~~aF~~~D~ 473 (477)
..+.++|+.||.
T Consensus 216 --~~~~~~~~~~D~ 227 (229)
T 3dd4_A 216 --ENIMRSMQLFEN 227 (229)
T ss_dssp --HHHHHHHHHHTT
T ss_pred --HHHHHHHHhccc
Confidence 479999999985
|
| >1jfj_A Ehcabp, calcium-binding protein; EF-hand, helix-loop-helix, metal binding protein; NMR {Entamoeba histolytica} SCOP: a.39.1.5 PDB: 1jfk_A 2nxq_A 3px1_A 3qjk_A 2jnx_A 2i18_A | Back alignment and structure |
|---|
Probab=99.64 E-value=8.9e-16 Score=126.85 Aligned_cols=121 Identities=22% Similarity=0.355 Sum_probs=105.4
Q ss_pred HHHHhhhcCCCCCCCccHHHHHHHHHhhCCCCCHHHHHHHHHHhhccc----hHHHHHhcCC-------hHHHHHHHHHh
Q 042823 328 LKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNSS----TLESLCENLP-------TKEKQKLMEKF 396 (477)
Q Consensus 328 l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~----~~~~~~~~~~-------~~~~~~l~~~F 396 (477)
++++|..+|.+++|.|+.+|+..++..++..++..++..+++.+|.++ ++.+|...+. .....+++.+|
T Consensus 2 l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~~~f 81 (134)
T 1jfj_A 2 AEALFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYGSIQGQDLSDDKIGLKVLY 81 (134)
T ss_dssp HHHHHHHHCTTCSSEEEHHHHHHHHHTTCCSSHHHHHHHHHHHHCSSCCSEEEHHHHHHHTTCSSCCSSHHHHHHHHHHH
T ss_pred HHHHHHHHCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHHcCCCCCeEcHHHHHHHHHHhcccccCCCHHHHHHHH
Confidence 567899999999999999999999999999999999999999998543 4666665552 23345699999
Q ss_pred hhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHH
Q 042823 397 REMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLM 452 (477)
Q Consensus 397 ~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~ 452 (477)
+.+|.|++|.|+.+||..++..+|... +..+++.+|.+++|.|+|+||+.++
T Consensus 82 ~~~D~d~~G~i~~~e~~~~l~~~~~~~----~~~~~~~~D~~~dg~i~~~ef~~~l 133 (134)
T 1jfj_A 82 KLMDVDGDGKLTKEEVTSFFKKHGIEK----VAEQVMKADANGDGYITLEEFLEFS 133 (134)
T ss_dssp HHHCCSSSSEEEHHHHHHHHTTTTCHH----HHHHHHHHHCSSSSEEEHHHHHHHH
T ss_pred HHHCCCCCCccCHHHHHHHHHHhCHHH----HHHHHHHhCCCCCCcEeHHHHHHHh
Confidence 999999999999999999999887644 8999999999999999999999876
|
| >2lvv_A Flagellar calcium-binding protein TB-24; EF-hand, metal binding protein; NMR {Trypanosoma brucei brucei} | Back alignment and structure |
|---|
Probab=99.63 E-value=8.7e-16 Score=139.51 Aligned_cols=137 Identities=23% Similarity=0.252 Sum_probs=110.7
Q ss_pred hhccCCchhhHHHHHHhhhcCCCCCCCccHHHHHH-HHHhhCCCCCHHHHHHHHHHh---------hcc----chHHHHH
Q 042823 316 IVEYLPDEETQALKEKFIEMDTDKNGTLSYDELRA-GLTKVGSMLTEFDVKHLMEAV---------KNS----STLESLC 381 (477)
Q Consensus 316 i~~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~-~l~~~~~~~~~~~~~~~~~~~---------d~~----~~~~~~~ 381 (477)
+...++.++...++++|..+|.+++|.|+.+||.. +++.+|..++..++..++..+ |.+ .++.+|+
T Consensus 41 l~~~ls~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~lg~~~~~~~~~~~~~~~f~~~~~~~~D~d~~G~I~~~EF~ 120 (226)
T 2lvv_A 41 IPRDKDAESKSRRIELFKQFDTNGTGKLGFREVLDGCYGILKLDEFTTHLPDIVQRAFDKAKDLGNKVKGVGEEDLVEFL 120 (226)
T ss_dssp SCSSCCHHHHHHHHHHHHHHGGGSCSCBCSHHHHHHHHHTTCCTTTSSSCHHHHHHHHHHHHHHHHHHSCCCCCSCBCHH
T ss_pred hchhCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHhcccCCCCCCCCcCCHHHHH
Confidence 44567888899999999999999999999999998 556668888777777777765 533 2344443
Q ss_pred h---cCC-hHHHHHHHHHhhhhcCCCCCCcCHHHHHHHHHHc---CCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHh
Q 042823 382 E---NLP-TKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKL---GSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTD 454 (477)
Q Consensus 382 ~---~~~-~~~~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~---g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~ 454 (477)
. .+. ....+.++.+|+.||+|++|+|+.+||+.+|..+ |...+ ++..++..+|.|+||.|+|+||+.++..
T Consensus 121 ~~~~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~~~g~~~~--e~~~~~~~~D~d~dG~Is~~EF~~~~~~ 198 (226)
T 2lvv_A 121 EFRLMLCYIYDIFELTVMFDTMDKDGSLLLELQEFKEALPKLKEWGVDIT--DATTVFNEIDTNGSGVVTFDEFSCWAVT 198 (226)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSCSSCCEECHHHHHHHHHHHHHHTCCCC--SCHHHHHHHCCSCSSCEEHHHHHHHHHH
T ss_pred HHHHHHHhccCHHHHHHHHHHHcCCCCCeEcHHHHHHHHHHHhhcCCCHH--HHHHHHHHhCCCCCCcEeHHHHHHHHHh
Confidence 3 111 1234589999999999999999999999999987 76665 5999999999999999999999999975
|
| >1jba_A GCAP-2, protein (guanylate cyclase activating protein 2); EF-hand, calcium-binding protein, guanylyl cyclase regulation, lyase; NMR {Bos taurus} SCOP: a.39.1.5 | Back alignment and structure |
|---|
Probab=99.62 E-value=3.5e-15 Score=133.27 Aligned_cols=128 Identities=25% Similarity=0.363 Sum_probs=111.1
Q ss_pred chhhHHHHHHhhhcCCC-CCCCccHHHHHHHHHhhCCCCCHHHHHHHHHHhhccchHHHHHhcCChHHHHHHHHHhhhhc
Q 042823 322 DEETQALKEKFIEMDTD-KNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNSSTLESLCENLPTKEKQKLMEKFREMD 400 (477)
Q Consensus 322 ~~~~~~l~~~F~~~D~~-~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~F~~~D 400 (477)
.-....++++|..+|.+ ++|.|+.+||..+++.+|..++. +.+..+|+.+|
T Consensus 18 ~~~~~el~~~f~~~D~~~~~G~i~~~e~~~~l~~~~~~~~~----------------------------~~~~~~f~~~D 69 (204)
T 1jba_A 18 AADAAQLQEWYKKFLEECPSGTLFMHEFKRFFKVPDNEEAT----------------------------QYVEAMFRAFD 69 (204)
T ss_dssp HHHHHHHHHHHHHHHSSSTTCCEEHHHHHHHHHCCSSSTTH----------------------------HHHHHHHHHHC
T ss_pred CCCHHHHHHHHHHHHhhCCCCCcCHHHHHHHHHHhcCCCcH----------------------------HHHHHHHHHHc
Confidence 44566788999999999 89999999999999998764432 35667899999
Q ss_pred CCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhhhC-----------------CCcHHH
Q 042823 401 TDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIYK-----------------LETPEL 463 (477)
Q Consensus 401 ~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~~~-----------------~~~~~~ 463 (477)
.|++|.|+.+||..++..++...+++++..+++.+|.+++|.|+++||..++..... ...+++
T Consensus 70 ~d~~G~i~~~Ef~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~E~~~~l~~~~~~~g~~~~~~~~~~~g~~~~~~~~ 149 (204)
T 1jba_A 70 TNGDNTIDFLEYVAALNLVLRGTLEHKLKWTFKIYDKDRNGCIDRQELLDIVESIYKLKKACSVEVEAEQQGKLLTPEEV 149 (204)
T ss_dssp CSSSSEECHHHHHHHHHHHSSCCCTHHHHHHHHHHCSSCSSCBCHHHHHHHHHHHHHHHHHSSCCTTSSTTTCCCCHHHH
T ss_pred CCCCCeEeHHHHHHHHHHHccCCHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHHHHhCCCCccccccccCchhhHHHH
Confidence 999999999999999999988888999999999999999999999999999876521 145578
Q ss_pred HHHHHHHhccCCCC
Q 042823 464 LEKAFQYLDKNSDQ 477 (477)
Q Consensus 464 l~~aF~~~D~d~~G 477 (477)
+..+|+.+|+|+||
T Consensus 150 ~~~~f~~~D~d~dG 163 (204)
T 1jba_A 150 VDRIFLLVDENGDG 163 (204)
T ss_dssp HHHHHHHHCCSCCS
T ss_pred HHHHHHHhCCCCCC
Confidence 99999999999998
|
| >2hps_A Coelenterazine-binding protein with bound coelent; bioluminescence, southeast collabora structural genomics, secsg, structural genomics, PSI; HET: CTZ; 1.72A {Renilla muelleri} PDB: 2hq8_A | Back alignment and structure |
|---|
Probab=99.62 E-value=3.9e-16 Score=137.22 Aligned_cols=138 Identities=18% Similarity=0.236 Sum_probs=113.6
Q ss_pred cCCchhhHHHHHHhhhcCCCCCCCccHHHHHHHHHhh------CCCCCHHHHHHHH---------HHhhccc----hHHH
Q 042823 319 YLPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKV------GSMLTEFDVKHLM---------EAVKNSS----TLES 379 (477)
Q Consensus 319 ~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~------~~~~~~~~~~~~~---------~~~d~~~----~~~~ 379 (477)
.+++++...++..|..+|.+++|.|+.+||..+++.+ |..++..++..++ +.+|.++ ++.+
T Consensus 7 ~l~~~~~~~l~~~F~~~D~d~dG~i~~~El~~~l~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~f~~~D~d~dg~I~~~E 86 (186)
T 2hps_A 7 SERAYHLRKMKTRMQRVDVTGDGFISREDYELIAVRIAKIAKLSAEKAEETRQEFLRVADQLGLAPGVRISVEEAAVNAT 86 (186)
T ss_dssp HHHHHHHHHHHHHHHTTCTTCSSEEEHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHTCCTTCEEEHHHHHHHHH
T ss_pred cccHHHHHHHHHHhhhcCCCCCCccCHHHHHHHHHHHHHHHHcCCCCCcHHHHHHHHHHHHHHHHHhcCCCCCCcccHHH
Confidence 3456778889999999999999999999999999877 7788888888885 6666432 3444
Q ss_pred -HHhcCCh--HHHHHHHHHh--hhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHh
Q 042823 380 -LCENLPT--KEKQKLMEKF--REMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTD 454 (477)
Q Consensus 380 -~~~~~~~--~~~~~l~~~F--~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~ 454 (477)
+...+.. ...+++..+| ..||.|++|+|+.+||+.++..+|..+++++++.+++.+|.|++|.|+|+||+.++..
T Consensus 87 ~~~~~~~~~~~~~~~~~~~f~~~~fD~d~~G~I~~~E~~~~l~~~g~~~~~~~~~~~~~~~D~d~dG~i~~~ef~~~~~~ 166 (186)
T 2hps_A 87 DSLLKMKGEEKAMAVIQSLIMYDCIDTDKDGYVSLPEFKAFLQAVGPDLTDDKAITCFNTLDFNKNGQISRDEFLVTVND 166 (186)
T ss_dssp HHHHHCCTHHHHHTTHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHCTTCCHHHHHHHHHHHCTTCSSEEEHHHHHHHHHH
T ss_pred HHHHHhcCChHHHHHHHHHHHHHHccCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHHcCCCCCcCcHHHHHHHHHH
Confidence 2222221 2234666777 8889999999999999999999999999999999999999999999999999999986
Q ss_pred hh
Q 042823 455 IY 456 (477)
Q Consensus 455 ~~ 456 (477)
..
T Consensus 167 ~~ 168 (186)
T 2hps_A 167 FL 168 (186)
T ss_dssp HH
T ss_pred Hh
Confidence 55
|
| >2l2e_A Calcium-binding protein NCS-1; NCS1P, myristoylated, metal binding protein; HET: MYR; NMR {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=99.61 E-value=7.5e-15 Score=129.45 Aligned_cols=143 Identities=15% Similarity=0.176 Sum_probs=116.4
Q ss_pred hHHHHHHhhhcCCC-CCCCccHHHHHHHHHhhCCC-CCHHHHHHHHHHhhccc----hHHHHHhcCC----hHHHHHHHH
Q 042823 325 TQALKEKFIEMDTD-KNGTLSYDELRAGLTKVGSM-LTEFDVKHLMEAVKNSS----TLESLCENLP----TKEKQKLME 394 (477)
Q Consensus 325 ~~~l~~~F~~~D~~-~~G~i~~~el~~~l~~~~~~-~~~~~~~~~~~~~d~~~----~~~~~~~~~~----~~~~~~l~~ 394 (477)
...+.++|..+|.+ ++|.|+.+||..+++.++.. .+..++..+++.+|.++ ++.+|...+. ....++++.
T Consensus 24 ~~el~~~f~~~D~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~ef~~~~~~~~~~~~~~~~~~ 103 (190)
T 2l2e_A 24 KKELQQWYKGFFKDCPSGHLNKSEFQKIYKQFFPFGDPSAFAEYVFNVFDADKNGYIDFKEFICALSVTSRGELNDKLIW 103 (190)
T ss_dssp SHHHHHHHHHHHHHSCCCEECHHHHHHHHHHHCCCSCHHHHHHHHHHHHCSSSTTCEEHHHHHHHHTTSSCSCSHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCcCCHHHHHHHHHHhCCCCCccHHHHHHHHHhcCCCCCeEeHHHHHHHHHHHcCCCHHHHHHH
Confidence 34577889999999 89999999999999998654 56678899999998543 4566554332 223568899
Q ss_pred HhhhhcCCCCCCcCHHHHHHHHHHc------------CCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhhhCCCcHH
Q 042823 395 KFREMDTDNSDTLTLSELKAGLAKL------------GSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIYKLETPE 462 (477)
Q Consensus 395 ~F~~~D~~~~G~I~~~el~~~l~~~------------g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~ 462 (477)
+|+.+|.|++|.|+.+||..++..+ +...+++++..+++.+|.|+||.|+|+||+.++....
T Consensus 104 ~f~~~D~d~~G~i~~~e~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~~------ 177 (190)
T 2l2e_A 104 AFQLYDLDNNGLISYDEMLRIVDAIYKMVGSMVKLPEDEDTPEKRVNKIFNMMDKNKDGQLTLEEFCEGSKRDP------ 177 (190)
T ss_dssp HHHHHCTTSCSCBCHHHHHHHHHHHHHHHHHHSCCCSSCCCTHHHHHHHHHHHTCCSSCCBCHHHHHHHHHTCT------
T ss_pred HHhHccCCCCCcCcHHHHHHHHHHHHHHhccccCcccccccHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHhCc------
Confidence 9999999999999999999998772 3457889999999999999999999999999987532
Q ss_pred HHHHHHHHhcc
Q 042823 463 LLEKAFQYLDK 473 (477)
Q Consensus 463 ~l~~aF~~~D~ 473 (477)
.+..+|..||.
T Consensus 178 ~~~~~l~~~d~ 188 (190)
T 2l2e_A 178 TIVSALSLYDG 188 (190)
T ss_dssp HHHHHHHTTCS
T ss_pred HHHHHHHHHhc
Confidence 57788888875
|
| >1exr_A Calmodulin; high resolution, disorder, metal transport; 1.00A {Paramecium tetraurelia} SCOP: a.39.1.5 PDB: 1n0y_A 1osa_A 1clm_A 1mxe_A 2bbm_A 2bbn_A 4cln_A 4djc_A 2wel_D* 2x51_B 2vas_B* 2bkh_B 3gn4_B 3l9i_C 2ygg_B* 2w73_A 1lvc_D* 1wrz_A 2bki_B 2r28_A ... | Back alignment and structure |
|---|
Probab=99.61 E-value=1.6e-15 Score=127.98 Aligned_cols=95 Identities=32% Similarity=0.489 Sum_probs=86.0
Q ss_pred cCChHHHHHHHHHhhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhhhC-CCcH
Q 042823 383 NLPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIYK-LETP 461 (477)
Q Consensus 383 ~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~~~-~~~~ 461 (477)
.++.+++++++.+|..||.|++|.|+.+||..+|+.+|..+++.++..+++.+|.+++|.|+|+||+.++..... ....
T Consensus 3 ~l~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~ 82 (148)
T 1exr_A 3 QLTEEQIAEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLSLMARKMKEQDSE 82 (148)
T ss_dssp CCCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHTCCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHHhcccCCCcH
Confidence 467788899999999999999999999999999999999999999999999999999999999999998875432 2345
Q ss_pred HHHHHHHHHhccCCCC
Q 042823 462 ELLEKAFQYLDKNSDQ 477 (477)
Q Consensus 462 ~~l~~aF~~~D~d~~G 477 (477)
++++.+|+.||+|++|
T Consensus 83 ~~l~~~F~~~D~d~~G 98 (148)
T 1exr_A 83 EELIEAFKVFDRDGNG 98 (148)
T ss_dssp HHHHHHHHHHSTTCSS
T ss_pred HHHHHHHHHhCCCCCC
Confidence 7899999999999998
|
| >2r2i_A Guanylyl cyclase-activating protein 1; EF hand, GCAP, guanylate cyclase activating protein, GCAP1, GCAP-1, calcium, lipoprotein, myristate; HET: MYR; 2.00A {Gallus gallus} | Back alignment and structure |
|---|
Probab=99.61 E-value=1.8e-15 Score=134.50 Aligned_cols=124 Identities=21% Similarity=0.302 Sum_probs=106.6
Q ss_pred HHHHHhhhcCCC-CCCCccHHHHHHHHHhhCCCCCHHHHHHHHHHhhccchHHHHHhcCChHHHHHHHHHhhhhcCCCCC
Q 042823 327 ALKEKFIEMDTD-KNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNSSTLESLCENLPTKEKQKLMEKFREMDTDNSD 405 (477)
Q Consensus 327 ~l~~~F~~~D~~-~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~F~~~D~~~~G 405 (477)
.++++|..+|.+ ++|.|+.+||..+++.+|..++ ..+.+..+|+.+|.|++|
T Consensus 15 el~~~f~~fd~~~~~G~i~~~e~~~~l~~~~~~~~---------------------------~~~~~~~~f~~~D~d~~G 67 (198)
T 2r2i_A 15 ECHQWYKKFMTECPSGQLTLYEFKQFFGLKNLSPS---------------------------ANKYVEQMFETFDFNKDG 67 (198)
T ss_dssp CHHHHHHHHHHHCTTSEECHHHHHHHHTCCSCCHH---------------------------HHHHHHHHHHHHCTTCSS
T ss_pred HHHHHHHHHHHhCCCCcCCHHHHHHHHHHhCCCcc---------------------------hHHHHHHHHHHHCCCCCC
Confidence 457788889888 8999999999999988865332 234578899999999999
Q ss_pred CcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhhh------CCCc-HHHHHHHHHHhccCCCC
Q 042823 406 TLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIY------KLET-PELLEKAFQYLDKNSDQ 477 (477)
Q Consensus 406 ~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~~------~~~~-~~~l~~aF~~~D~d~~G 477 (477)
.|+.+||..++..++...+++++..+++.+|.|++|.|+++||..++.... ...+ ++.+..+|+.+|.|+||
T Consensus 68 ~I~~~Ef~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~D~d~dG 146 (198)
T 2r2i_A 68 YIDFMEYVAALSLVLKGKVDQKLRWYFKLYDVDGNGCIDRGELLNIIKAIRAINRCNEAMTAEEFTNMVFDKIDINGDG 146 (198)
T ss_dssp CEEHHHHHHHHHHHSSCCHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHTTGGGGSSSCCCHHHHHHHHHHHHCTTCSS
T ss_pred eEcHHHHHHHHHHHccCchHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHHHhhcCCCchhhHHHHHHHHHHHhCCCCCC
Confidence 999999999999999888899999999999999999999999999998653 2233 45589999999999998
|
| >2zfd_A Calcineurin B-like protein 2; calcium binding protein, protein-protein complex, ATP-bindin kinase, nucleotide-binding; 1.20A {Arabidopsis thaliana} SCOP: a.39.1.5 PDB: 1uhn_A | Back alignment and structure |
|---|
Probab=99.60 E-value=6.1e-15 Score=133.96 Aligned_cols=136 Identities=18% Similarity=0.293 Sum_probs=112.2
Q ss_pred cCCchhhHHHHHHhhhcCCC--CCCCccHHHHHHHHHhhCCCCCHHHHHHHHHHhhccc----hHHHHHhcC-----ChH
Q 042823 319 YLPDEETQALKEKFIEMDTD--KNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNSS----TLESLCENL-----PTK 387 (477)
Q Consensus 319 ~~~~~~~~~l~~~F~~~D~~--~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~----~~~~~~~~~-----~~~ 387 (477)
.++.++...+.+.|..+|.+ ++|.|+.+||..++.. .....+..+..+++.+|.++ ++.+|...+ ...
T Consensus 41 ~ls~~ei~~l~~~F~~~D~d~~~~G~I~~~El~~~l~~-~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~~~~~~ 119 (226)
T 2zfd_A 41 VFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFK-TNKKESLFADRVFDLFDTKHNGILGFEEFARALSVFHPNAP 119 (226)
T ss_dssp SCCHHHHHHHHHHHHHHHTSSSCSSSBCHHHHHHHHHS-CSSCCCHHHHHHHHHHCSSCSSSBCHHHHHHHHHHTSTTSC
T ss_pred CCCHHHHHHHHHHHHHhCcccCCCCeEcHHHHHHHHhc-cCcccHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHHccCCC
Confidence 56788899999999999999 9999999999999987 33344556788999998543 466665432 123
Q ss_pred HHHHHHHHhhhhcCCCCCCcCHHHHHHHHH----HcCCCCCHHHHHHHH----HHhcCCCCCcccHHHHHHHHHhh
Q 042823 388 EKQKLMEKFREMDTDNSDTLTLSELKAGLA----KLGSALEESEVNQYM----EAGDIDGNGNIDSIEFVNLMTDI 455 (477)
Q Consensus 388 ~~~~l~~~F~~~D~~~~G~I~~~el~~~l~----~~g~~~~~~~i~~~~----~~~d~~~~g~i~~~eF~~~~~~~ 455 (477)
..+.++.+|+.+|.|++|+|+.+||..++. .+|..+++++++.++ +.+|.|+||.|+|+||+.++...
T Consensus 120 ~~~~l~~~F~~~D~d~~G~Is~~E~~~~l~~~~~~~g~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~EF~~~~~~~ 195 (226)
T 2zfd_A 120 IDDKIHFSFQLYDLKQQGFIERQEVKQMVVATLAESGMNLKDTVIEDIIDKTFEEADTKHDGKIDKEEWRSLVLRH 195 (226)
T ss_dssp HHHHHHHHHHHHCTTSSSSEEHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHCSSCSSEECHHHHHHHHHHS
T ss_pred HHHHHHHHHHHhCCCCCCcccHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHhC
Confidence 466899999999999999999999999995 579999999886665 49999999999999999999753
|
| >2ehb_A Calcineurin B-like protein 4; protein complex, Ca(II) IONS bound to SOS3 (EF-hands 1 and 4 FISL motif; 2.10A {Arabidopsis thaliana} PDB: 1v1g_A 1v1f_A | Back alignment and structure |
|---|
Probab=99.60 E-value=8.7e-15 Score=130.98 Aligned_cols=136 Identities=17% Similarity=0.243 Sum_probs=111.8
Q ss_pred cCCchhhHHHHHHhhhcCCC--CCCCccHHHHHHHHHhhCCCCCHHHHHHHHHHhhccc----hHHHHHhcCC-----hH
Q 042823 319 YLPDEETQALKEKFIEMDTD--KNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNSS----TLESLCENLP-----TK 387 (477)
Q Consensus 319 ~~~~~~~~~l~~~F~~~D~~--~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~----~~~~~~~~~~-----~~ 387 (477)
.++.++...+...|..+|.+ ++|.|+.+||..++.. .....+..+..+++.+|.++ ++.+|...+. ..
T Consensus 30 ~~s~~~~~~l~~~F~~~D~d~~~~G~i~~~e~~~~l~~-~~~~~~~~~~~~f~~~D~d~~g~i~~~Ef~~~~~~~~~~~~ 108 (207)
T 2ehb_A 30 PFTVEEVEALYELFKKLSSSIIDDGLIHKEEFQLALFR-NRNRRNLFADRIFDVFDVKRNGVIEFGEFVRSLGVFHPSAP 108 (207)
T ss_dssp SCCHHHHHHHHHHHHHHTTSSSCSSCEEHHHHHHHHHS-CTTCCCHHHHHHHHHHCTTCSSEECHHHHHHHHGGGSTTSC
T ss_pred CCCHHHHHHHHHHHHHhccccCCCCccCHHHHHHHHhc-cccccHHHHHHHHHHhcCCCCCeEeHHHHHHHHHHHccCCC
Confidence 56788889999999999999 9999999999999887 33344556788999997543 4666654432 13
Q ss_pred HHHHHHHHhhhhcCCCCCCcCHHHHHHHHH----HcCCCCCHHHHHHHH----HHhcCCCCCcccHHHHHHHHHhh
Q 042823 388 EKQKLMEKFREMDTDNSDTLTLSELKAGLA----KLGSALEESEVNQYM----EAGDIDGNGNIDSIEFVNLMTDI 455 (477)
Q Consensus 388 ~~~~l~~~F~~~D~~~~G~I~~~el~~~l~----~~g~~~~~~~i~~~~----~~~d~~~~g~i~~~eF~~~~~~~ 455 (477)
..+.++.+|+.+|.|++|+|+.+||..++. ..|..+++++++.++ +.+|.|+||.|+|+||+.++...
T Consensus 109 ~~~~l~~~F~~~D~d~~G~I~~~E~~~~l~~~~~~~g~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~ 184 (207)
T 2ehb_A 109 VHEKVKFAFKLYDLRQTGFIEREELKEMVVALLHESELVLSEDMIEVMVDKAFVQADRKNDGKIDIDEWKDFVSLN 184 (207)
T ss_dssp HHHHHHHHHHHHCTTCCSSEEHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHHHHcccccCHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHhC
Confidence 456799999999999999999999999986 569999998886665 59999999999999999998753
|
| >1wy9_A Allograft inflammatory factor 1; EF-hand, calucium binding, metal binding protein; 2.10A {Mus musculus} PDB: 2g2b_A | Back alignment and structure |
|---|
Probab=99.60 E-value=1.4e-15 Score=128.22 Aligned_cols=108 Identities=11% Similarity=0.200 Sum_probs=86.5
Q ss_pred HHHHHHHHhhccchHHHHHhcCChHHHHHHHHHhhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCc
Q 042823 363 DVKHLMEAVKNSSTLESLCENLPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGN 442 (477)
Q Consensus 363 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~ 442 (477)
.+..+...+.....+..+... .++.++++.+|+.||.|++|.|+.+||+.+|+.+|..+++++++.+++.+|.+++|.
T Consensus 23 ~l~~~~~~~~~~~~~~~~~~l--~~~~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~g~~~~~~~~~~l~~~~D~d~dg~ 100 (147)
T 1wy9_A 23 RLEGINKQFLDDPKYSNDEDL--PSKLEAFKVKYMEFDLNGNGDIDIMSLKRMLEKLGVPKTHLELKRLIREVSSGSEET 100 (147)
T ss_dssp HHHHHHHHHTTCHHHHTCTTH--HHHHHHHHHHHTTSCCCTTSSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHCSSCTTE
T ss_pred HHHHHHHHHhcCcchhHHHHH--HHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCc
Confidence 344444444333333333322 567889999999999999999999999999999999999999999999999999999
Q ss_pred ccHHHHHHHHHhhhCCCcHHHHHHHHHHhccCCCC
Q 042823 443 IDSIEFVNLMTDIYKLETPELLEKAFQYLDKNSDQ 477 (477)
Q Consensus 443 i~~~eF~~~~~~~~~~~~~~~l~~aF~~~D~d~~G 477 (477)
|+|+||+.++... .+++..||+.||.|++|
T Consensus 101 I~~~eF~~~~~~~-----~~~~~~aF~~~D~d~~g 130 (147)
T 1wy9_A 101 FSYSDFLRMMLGK-----RSAILRMILMYEEKNKE 130 (147)
T ss_dssp ECHHHHHHHHCSS-----GGGGGGGGGGCCCC---
T ss_pred EeHHHHHHHHHHh-----HHHHHHHHHHHccCCCC
Confidence 9999999998653 45689999999999987
|
| >3i5g_B Myosin regulatory light chain LC-2, mantle muscle; rigor-like, squid, muscle myosin, contractIle protein; 2.60A {Todarodes pacificus} PDB: 3i5f_B 3i5h_B 3i5i_B | Back alignment and structure |
|---|
Probab=99.60 E-value=2.8e-15 Score=127.21 Aligned_cols=91 Identities=22% Similarity=0.443 Sum_probs=82.2
Q ss_pred cCChHHHHHHHHHhhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhhhC-CCcH
Q 042823 383 NLPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIYK-LETP 461 (477)
Q Consensus 383 ~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~~~-~~~~ 461 (477)
.|+.+++++++++|+.||+|++|.|+.+||+.+|+.+|..+++.++..++. +++|.|+|++|+.++..... ..++
T Consensus 9 ~Lt~~qi~elk~~F~~~D~d~dG~I~~~El~~~l~~lg~~~~~~~~~~~~~----~~~~~i~f~ef~~~~~~~~~~~~~~ 84 (153)
T 3i5g_B 9 KLSQRQMQELKEAFTMIDQDRDGFIGMEDLKDMFSSLGRVPPDDELNAMLK----ECPGQLNFTAFLTLFGEKVSGTDPE 84 (153)
T ss_dssp TCCHHHHHHHHHHHHHHCCSTTSCCCHHHHHHHHHHTTSCCCHHHHHHHHH----TSSSCCCSHHHHHTTTTTTTTCCCH
T ss_pred CCCHHHHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHcCCCccHHHHHHHHH----hccCCccHHHHHHHHHhhhcccccH
Confidence 578899999999999999999999999999999999999999999988876 45678999999999876554 4567
Q ss_pred HHHHHHHHHhccCCCC
Q 042823 462 ELLEKAFQYLDKNSDQ 477 (477)
Q Consensus 462 ~~l~~aF~~~D~d~~G 477 (477)
++++.||+.||+||+|
T Consensus 85 ~~l~~aF~~fD~d~~G 100 (153)
T 3i5g_B 85 DALRNAFSMFDEDGQG 100 (153)
T ss_dssp HHHHHHHHTTCSSCSS
T ss_pred HHHHHHHhccccCCCC
Confidence 8999999999999998
|
| >2lv7_A Calcium-binding protein 7; metal binding protein; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.59 E-value=1.5e-15 Score=118.29 Aligned_cols=71 Identities=30% Similarity=0.540 Sum_probs=67.7
Q ss_pred cCChHHHHHHHHHhhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHH
Q 042823 383 NLPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMT 453 (477)
Q Consensus 383 ~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~ 453 (477)
.++.++.++++++|+.||+|++|+|+.+||+.+|+.+|..+++++++++++.+|.|+||.|+|+||+.+|.
T Consensus 29 ~l~~~~~~el~~~F~~~D~d~~G~I~~~El~~~l~~lg~~~~~~ei~~l~~~~D~d~dG~I~~~EF~~~m~ 99 (100)
T 2lv7_A 29 DIPEDELEEIREAFKVFDRDGNGFISKQELGTAMRSLGYMPNEVELEVIIQRLDMDGDGQVDFEEFVTLLG 99 (100)
T ss_dssp CCCGGGHHHHHHHHHHTCSSCSSCBCHHHHHHHHHHHTCCCCTTTHHHHHHHHCSSCSSSBCHHHHHHHTC
T ss_pred cCCHHHHHHHHHHHHHHcCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHHCCCCCCeEeHHHHHHHhC
Confidence 46778899999999999999999999999999999999999999999999999999999999999999874
|
| >1qxp_A MU-like calpain; M-calpain, MU-calpain, catalytic triad, Ca(2+) requirement, hydrolase chimera; 2.80A {Rattus norvegicus} SCOP: a.39.1.8 a.39.1.8 b.14.1.1 d.3.1.3 | Back alignment and structure |
|---|
Probab=99.59 E-value=6.3e-16 Score=168.00 Aligned_cols=143 Identities=19% Similarity=0.236 Sum_probs=117.3
Q ss_pred hHHHHHHhhhcCCCCCCCccHHHHHHHHHhhCC--------CCCHHHHHHHHHHhhccc----hHHHHHhcCChHHHHHH
Q 042823 325 TQALKEKFIEMDTDKNGTLSYDELRAGLTKVGS--------MLTEFDVKHLMEAVKNSS----TLESLCENLPTKEKQKL 392 (477)
Q Consensus 325 ~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~--------~~~~~~~~~~~~~~d~~~----~~~~~~~~~~~~~~~~l 392 (477)
...++++|..+| +++|.|+.+||..+|+.++. .++..++..+++.+|.++ ++.+|...+. ..+++
T Consensus 533 ~~~l~~~F~~~D-~~dG~Is~~El~~~L~~~~~~~~~~~~~~~s~~~~~~l~~~~D~d~~G~I~~~EF~~~~~--~~~~l 609 (900)
T 1qxp_A 533 DDNFKTLFSKLA-GDDMEISVKELQTILNRIISKHKDLRTNGFSLESCRSMVNLMDRDGNGKLGLVEFNILWN--RIRNY 609 (900)
T ss_dssp --------CCCC-CSSSSCCCSCTTTTTCC---------CCCCCHHHHHHHHHHHCC--CCCCCSSSHHHHHH--HHHHH
T ss_pred HHHHHHHHHHHc-CCCCcCCHHHHHHHHHHhhcccccccCCCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHH--HHHHH
Confidence 678899999999 99999999999999999875 789999999999998543 3555554432 24789
Q ss_pred HHHhhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhhhCCCcHHHHHHHHHHhc
Q 042823 393 MEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIYKLETPELLEKAFQYLD 472 (477)
Q Consensus 393 ~~~F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~l~~aF~~~D 472 (477)
+.+|+.||.|++|+|+.+||+.+|+.+|..+++++++.+++.+| +++|.|+|+||+.++... +.+..+|+.+|
T Consensus 610 ~~~F~~~D~d~~G~Is~~El~~~l~~~g~~l~~~~~~~l~~~~d-d~dg~I~~~eF~~~~~~~------~~l~~~F~~~D 682 (900)
T 1qxp_A 610 LTIFRKFDLDKSGSMSAYEMRMAIEAAGFKLPCQLHQVIVARFA-DDELIIDFDNFVRCLVRL------EILFKIFKQLD 682 (900)
T ss_dssp HHHHGGGCTTCCSCCBHHHHHHHHHHTTEECCHHHHHHHHHHTS-CSSSBCCHHHHHHHHHHH------HHHHHHHHHSC
T ss_pred HHHHHhhCCCCCCeECHHHHHHHHHHhCCCCCHHHHHHHHHHhC-CCCCeEcHHHHHHHHHHH------HHHHHHHHhhC
Confidence 99999999999999999999999999999999999999999999 999999999999998753 57899999999
Q ss_pred cCCCC
Q 042823 473 KNSDQ 477 (477)
Q Consensus 473 ~d~~G 477 (477)
+|++|
T Consensus 683 ~d~~G 687 (900)
T 1qxp_A 683 PENTG 687 (900)
T ss_dssp SSCCS
T ss_pred CCCCc
Confidence 99998
|
| >2f33_A Calbindin; EF-hand, Ca2+-binding, metal binding protein; NMR {Rattus norvegicus} PDB: 2g9b_A | Back alignment and structure |
|---|
Probab=99.59 E-value=2.1e-15 Score=140.17 Aligned_cols=131 Identities=16% Similarity=0.311 Sum_probs=114.5
Q ss_pred hhHHHHHHhhhcCCCCCCCccHHHHHHHHHhh----CCCCCHHHHHH----HHHHhhcc----chHHHHHhcCCh-----
Q 042823 324 ETQALKEKFIEMDTDKNGTLSYDELRAGLTKV----GSMLTEFDVKH----LMEAVKNS----STLESLCENLPT----- 386 (477)
Q Consensus 324 ~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~----~~~~~~~~~~~----~~~~~d~~----~~~~~~~~~~~~----- 386 (477)
....+..+|..+|.+++|.|+.+||..++..+ |..++..++.. ++..+|.+ .++.+|+..+..
T Consensus 101 ~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~ef~~~~~~~~~~~ 180 (263)
T 2f33_A 101 SCEEFMKTWRKYDTDHSGFIETEELKNFLKDLLEKANKTVDDTKLAEYTDLMLKLFDSNNDGKLELTEMARLLPVQENFL 180 (263)
T ss_dssp CHHHHHHHHTTSSTTTCSSBCHHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHTCSSSSSCBCHHHHHHHSCTTTCSH
T ss_pred HHHHHHHHHHHHCCCCCCCcCHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHhcCCCCCCeEcHHHHHHHHHHHHHHH
Confidence 45568899999999999999999999999988 88999988877 88888743 358888876653
Q ss_pred -------HHHHHHHHHhhhhcCCCCCCcCHHHHHHHHHHcCC----CCCHHHHHHHHHH-hcCCCCCcccHHHHHHHHHh
Q 042823 387 -------KEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGS----ALEESEVNQYMEA-GDIDGNGNIDSIEFVNLMTD 454 (477)
Q Consensus 387 -------~~~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~----~~~~~~i~~~~~~-~d~~~~g~i~~~eF~~~~~~ 454 (477)
...+.++.+|+.||+|++|+|+.+||+.+++.+|. .+++++++.+++. +|.|+||.|+|+||+.++..
T Consensus 181 ~~~~~~~~~~~~~~~~F~~~D~d~~G~is~~El~~~l~~~~~~~~~~~~~~e~~~~~~~~~D~d~dG~i~~~EF~~~~~~ 260 (263)
T 2f33_A 181 LKFQGIKMCGKEFNKAFELYDQDGNGYIDENELDALLKDLCEKNKQELDINNISTYKKNIMALSDGGKLYRTDLALILSA 260 (263)
T ss_dssp HHHHHTCCCHHHHHHHHHHHCCSSSSCEEHHHHHHHHHHHHHHCTTTCCTTTHHHHHHHHHTTSBTTEECGGGTHHHHCC
T ss_pred HHhcCcchHHHHHHHHHHHhCCCCCCcccHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHhhccCCCCeEcHHHHHHHHhc
Confidence 23568999999999999999999999999999887 8999999999987 79999999999999998864
|
| >1fpw_A Yeast frequenin, calcium-binding protein NCS-1; EF-hand, metal binding protein; NMR {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2ju0_A | Back alignment and structure |
|---|
Probab=99.59 E-value=5.8e-15 Score=130.11 Aligned_cols=125 Identities=19% Similarity=0.281 Sum_probs=104.0
Q ss_pred HHHHHHhhhcCCC-CCCCccHHHHHHHHHhhCCCCCHHHHHHHHHHhhccchHHHHHhcCChHHHHHHHHHhhhhcCCCC
Q 042823 326 QALKEKFIEMDTD-KNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNSSTLESLCENLPTKEKQKLMEKFREMDTDNS 404 (477)
Q Consensus 326 ~~l~~~F~~~D~~-~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~F~~~D~~~~ 404 (477)
..+.++|..+|.+ ++|.|+.+||..+++.++.... . ...+..+|+.+|.|++
T Consensus 25 ~~i~~~~~~fd~~~~~G~i~~~e~~~~l~~~~~~~~------------------------~---~~~~~~~f~~~D~d~~ 77 (190)
T 1fpw_A 25 REIQQWHKGFLRDCPSGQLAREDFVKIYKQFFPFGS------------------------P---EDFANHLFTVFDKDNN 77 (190)
T ss_dssp HHHHHHHHHHHHHCTTCCEEHHHHHHHHHHHCTTSC------------------------C---SHHHHHHHHTCCSSCS
T ss_pred HHHHHHHHHHHHHCCCCcCcHHHHHHHHHHHcCCCC------------------------c---HHHHHHHHHHHCCCCC
Confidence 3455566666665 8999999999999988753111 0 1346788999999999
Q ss_pred CCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhhhC------------CCcHHHHHHHHHHhc
Q 042823 405 DTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIYK------------LETPELLEKAFQYLD 472 (477)
Q Consensus 405 G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~~~------------~~~~~~l~~aF~~~D 472 (477)
|.|+.+||..++..++...+++++..+++.+|.|++|.|+++||..++..... ..+.+++..+|+.+|
T Consensus 78 G~i~~~ef~~~~~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~ef~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D 157 (190)
T 1fpw_A 78 GFIHFEEFITVLSTTSRGTLEEKLSWAFELYDLNHDGYITFDEMLTIVASVYKMMGSMVTLNEDEATPEMRVKKIFKLMD 157 (190)
T ss_dssp SEECHHHHHHHHHHHSCCCSTHHHHHHHHHHCSSCSSEEEHHHHHHHHHHHHTTSCSTTSSSCCCCCHHHHHHHHHHHHT
T ss_pred CcEeHHHHHHHHHHHccCCcHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHHHHHhccccCcccccchHHHHHHHHHHHhC
Confidence 99999999999999998899999999999999999999999999999876421 245678999999999
Q ss_pred cCCCC
Q 042823 473 KNSDQ 477 (477)
Q Consensus 473 ~d~~G 477 (477)
+|+||
T Consensus 158 ~d~dG 162 (190)
T 1fpw_A 158 KNEDG 162 (190)
T ss_dssp TTCSS
T ss_pred CCCCC
Confidence 99998
|
| >1s1e_A KV channel interacting protein 1; kchip, calcium-binding protein, EF-finger, transport protein; 2.30A {Homo sapiens} SCOP: a.39.1.5 | Back alignment and structure |
|---|
Probab=99.58 E-value=1.1e-14 Score=132.10 Aligned_cols=146 Identities=15% Similarity=0.214 Sum_probs=114.8
Q ss_pred CCchhhHHHHHHhhhcCCCCCCCccHHHHHHHHHhhCCC-CCHHHHHHHHHHhhccc----hHHHHHhcCCh----HHHH
Q 042823 320 LPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSM-LTEFDVKHLMEAVKNSS----TLESLCENLPT----KEKQ 390 (477)
Q Consensus 320 ~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~-~~~~~~~~~~~~~d~~~----~~~~~~~~~~~----~~~~ 390 (477)
++.++...+...|... +++|.|+.+||..+++.++.. ++..++..+++.+|.++ ++.+|...+.. ...+
T Consensus 48 ~s~~ei~~l~~~Fd~~--d~~G~I~~~E~~~~l~~l~~~~~~~~~~~~~f~~~D~d~~G~I~~~Ef~~~l~~~~~~~~~~ 125 (224)
T 1s1e_A 48 FTKRELQVLYRGFKNE--CPSGVVNEETFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVKFEDFVTALSILLRGTVHE 125 (224)
T ss_dssp CCHHHHHHHHHHHHHH--CTTSCBCHHHHHHHHHTTCTTSCCHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHHHCCHHH
T ss_pred CCHHHHHHHHHHHHhh--CCCCCCCHHHHHHHHHHhcCCCCcHHHHHHHHHHhcCCCCCcEeHHHHHHHHHHHccCCHHH
Confidence 4555555555555543 489999999999999999764 78899999999998543 46666554321 2356
Q ss_pred HHHHHhhhhcCCCCCCcCHHHHHHHHHHc----CCC----C----CHHHHHHHHHHhcCCCCCcccHHHHHHHHHhhhCC
Q 042823 391 KLMEKFREMDTDNSDTLTLSELKAGLAKL----GSA----L----EESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIYKL 458 (477)
Q Consensus 391 ~l~~~F~~~D~~~~G~I~~~el~~~l~~~----g~~----~----~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~ 458 (477)
+++.+|+.+|.|++|+|+.+||..++..+ |.. + ++++++.+++.+|.|+||.|+|+||+.++...
T Consensus 126 ~l~~~F~~~D~d~dG~Is~~E~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~Is~~EF~~~~~~~--- 202 (224)
T 1s1e_A 126 KLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGIVTLDEFLESCQED--- 202 (224)
T ss_dssp HHHHHHHHHCTTCCSEECHHHHHHHHHHHHHHHTTCCCGGGCSSSHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHTC---
T ss_pred HHHHHHHHHcCCCCCeECHHHHHHHHHHHHHHhcccCCCCCCHhHHHHHHHHHHHHhCCCCCCcEeHHHHHHHHHhC---
Confidence 78999999999999999999999999886 643 2 34889999999999999999999999999753
Q ss_pred CcHHHHHHHHHHhcc
Q 042823 459 ETPELLEKAFQYLDK 473 (477)
Q Consensus 459 ~~~~~l~~aF~~~D~ 473 (477)
..+.++|..++.
T Consensus 203 ---~~l~~~l~~~~~ 214 (224)
T 1s1e_A 203 ---DNIMRSLQLFQN 214 (224)
T ss_dssp ---HHHHHHHHHHHH
T ss_pred ---HHHHHHhcCCCC
Confidence 367788887764
|
| >2d8n_A Recoverin; structural genomics, NPPSFA, national project on protein STR and functional analyses, riken structural genomics/proteomi initiative; 2.20A {Homo sapiens} PDB: 2i94_A 1iku_A* 1jsa_A* 1omr_A 1rec_A 1la3_A* 1omv_A 2het_A | Back alignment and structure |
|---|
Probab=99.58 E-value=5e-15 Score=132.52 Aligned_cols=145 Identities=14% Similarity=0.153 Sum_probs=116.4
Q ss_pred hHHHHHHhhhcCCC-CCCCccHHHHHHHHHhhCCC-CCHHHHHHHHHHhhccc----hHHHHHhcCC----hHHHHHHHH
Q 042823 325 TQALKEKFIEMDTD-KNGTLSYDELRAGLTKVGSM-LTEFDVKHLMEAVKNSS----TLESLCENLP----TKEKQKLME 394 (477)
Q Consensus 325 ~~~l~~~F~~~D~~-~~G~i~~~el~~~l~~~~~~-~~~~~~~~~~~~~d~~~----~~~~~~~~~~----~~~~~~l~~ 394 (477)
...+..+|..+|.+ ++|.|+.+||..++..++.. ++..++..+++.+|.++ ++.+|...+. ....++++.
T Consensus 32 ~~~i~~~f~~~d~~~~~G~i~~~ef~~~l~~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~Ef~~~~~~~~~~~~~~~~~~ 111 (207)
T 2d8n_A 32 EEELCSWYQSFLKDCPTGRITQQQFQSIYAKFFPDTDPKAYAQHVFRSFDSNLDGTLDFKEYVIALHMTTAGKTNQKLEW 111 (207)
T ss_dssp HHHHHHHHHHHHHHCTTSEEEHHHHHHHHHHTCTTSCCHHHHHHHHHHHCTTCCSEEEHHHHHHHHHHHSCSSSSTTHHH
T ss_pred HHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHhccCCCcHHHHHHHHHHhcCCCCCeEeHHHHHHHHHHHcCCCHHHHHHH
Confidence 34567778888888 79999999999999999764 78889999999998543 4555554331 122347889
Q ss_pred HhhhhcCCCCCCcCHHHHHHHHHHc----C----CCCC------HHHHHHHHHHhcCCCCCcccHHHHHHHHHhhhCCCc
Q 042823 395 KFREMDTDNSDTLTLSELKAGLAKL----G----SALE------ESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIYKLET 460 (477)
Q Consensus 395 ~F~~~D~~~~G~I~~~el~~~l~~~----g----~~~~------~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~~~ 460 (477)
+|+.+|.|++|+|+.+||..++..+ | ..++ +++++.+++.+|.|++|.|+|+||+.++...
T Consensus 112 ~f~~~D~d~~G~I~~~E~~~~l~~~~~~~g~~~~~~l~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~----- 186 (207)
T 2d8n_A 112 AFSLYDVDGNGTISKNEVLEIVMAIFKMITPEDVKLLPDDENTPEKRAEKIWKYFGKNDDDKLTEKEFIEGTLAN----- 186 (207)
T ss_dssp HHHHHCTTCSSEECHHHHHHHHHHHHHHSCHHHHHTSCTTTSSHHHHHHHHHHHTTCCTTCCEEHHHHHHHHHHC-----
T ss_pred HHHHhcCCCCCeEcHHHHHHHHHHHHHHhccccCCCcccccccHHHHHHHHHHHcCCCCCCcCcHHHHHHHHHhC-----
Confidence 9999999999999999999999886 7 5554 3679999999999999999999999999753
Q ss_pred HHHHHHHHHHhccCC
Q 042823 461 PELLEKAFQYLDKNS 475 (477)
Q Consensus 461 ~~~l~~aF~~~D~d~ 475 (477)
..+..+|..||..-
T Consensus 187 -~~~~~~~~~~~~~~ 200 (207)
T 2d8n_A 187 -KEILRLIQFEPQKV 200 (207)
T ss_dssp -HHHHHHHSCCCSSC
T ss_pred -hHHHHHHhhhhHHH
Confidence 36788888887643
|
| >2d8n_A Recoverin; structural genomics, NPPSFA, national project on protein STR and functional analyses, riken structural genomics/proteomi initiative; 2.20A {Homo sapiens} PDB: 2i94_A 1iku_A* 1jsa_A* 1omr_A 1rec_A 1la3_A* 1omv_A 2het_A | Back alignment and structure |
|---|
Probab=99.58 E-value=1.5e-14 Score=129.45 Aligned_cols=142 Identities=22% Similarity=0.293 Sum_probs=117.3
Q ss_pred hcCCCCCCCccHHHHHHHHHhhCCCCCHHHHHHHHHHhhcc---c--hHHHHH---hcCCh--HHHHHHHHHhhhhcCCC
Q 042823 334 EMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNS---S--TLESLC---ENLPT--KEKQKLMEKFREMDTDN 403 (477)
Q Consensus 334 ~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~---~--~~~~~~---~~~~~--~~~~~l~~~F~~~D~~~ 403 (477)
.++.+++|.|+.+++..+++.++ ++..++..+++.+|.+ + ++.+|. ..+.. .....+..+|+.+|.|+
T Consensus 7 ~mg~~~~g~l~~~el~~~~~~~~--~~~~~i~~~f~~~d~~~~~G~i~~~ef~~~l~~~~~~~~~~~~~~~~f~~~D~d~ 84 (207)
T 2d8n_A 7 GMGNSKSGALSKEILEELQLNTK--FSEEELCSWYQSFLKDCPTGRITQQQFQSIYAKFFPDTDPKAYAQHVFRSFDSNL 84 (207)
T ss_dssp -CTTCCTTCCCHHHHHHHHHHSS--CCHHHHHHHHHHHHHHCTTSEEEHHHHHHHHHHTCTTSCCHHHHHHHHHHHCTTC
T ss_pred hhccccCCCCCHHHHHHHHHHcC--CCHHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHhccCCCcHHHHHHHHHHhcCCC
Confidence 47889999999999999999887 6899999999988743 2 244443 33311 23467899999999999
Q ss_pred CCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhh----h-----CC-----CcHHHHHHHHH
Q 042823 404 SDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDI----Y-----KL-----ETPELLEKAFQ 469 (477)
Q Consensus 404 ~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~----~-----~~-----~~~~~l~~aF~ 469 (477)
+|.|+.+||..++..++...+++++..+++.+|.|++|.|+++||..++... . .. ..++++..+|+
T Consensus 85 ~G~i~~~Ef~~~~~~~~~~~~~~~~~~~f~~~D~d~~G~I~~~E~~~~l~~~~~~~g~~~~~~l~~~~~~~~~~~~~~f~ 164 (207)
T 2d8n_A 85 DGTLDFKEYVIALHMTTAGKTNQKLEWAFSLYDVDGNGTISKNEVLEIVMAIFKMITPEDVKLLPDDENTPEKRAEKIWK 164 (207)
T ss_dssp CSEEEHHHHHHHHHHHSCSSSSTTHHHHHHHHCTTCSSEECHHHHHHHHHHHHHHSCHHHHHTSCTTTSSHHHHHHHHHH
T ss_pred CCeEeHHHHHHHHHHHcCCCHHHHHHHHHHHhcCCCCCeEcHHHHHHHHHHHHHHhccccCCCcccccccHHHHHHHHHH
Confidence 9999999999999999988888999999999999999999999999998764 1 11 22467999999
Q ss_pred HhccCCCC
Q 042823 470 YLDKNSDQ 477 (477)
Q Consensus 470 ~~D~d~~G 477 (477)
.+|+|+||
T Consensus 165 ~~D~d~dG 172 (207)
T 2d8n_A 165 YFGKNDDD 172 (207)
T ss_dssp HTTCCTTC
T ss_pred HcCCCCCC
Confidence 99999998
|
| >1g8i_A Frequenin, neuronal calcium sensor 1; calcium binding-protein, EF-hand, calcium ION, metal binding protein; HET: 1PE P6G; 1.90A {Homo sapiens} SCOP: a.39.1.5 PDB: 2lcp_A | Back alignment and structure |
|---|
Probab=99.58 E-value=7.5e-15 Score=129.40 Aligned_cols=142 Identities=15% Similarity=0.171 Sum_probs=112.7
Q ss_pred hHHHHHHhhhcCCC-CCCCccHHHHHHHHHhh-CCCCCHHHHHHHHHHhhccc----hHHHHHhcCCh----HHHHHHHH
Q 042823 325 TQALKEKFIEMDTD-KNGTLSYDELRAGLTKV-GSMLTEFDVKHLMEAVKNSS----TLESLCENLPT----KEKQKLME 394 (477)
Q Consensus 325 ~~~l~~~F~~~D~~-~~G~i~~~el~~~l~~~-~~~~~~~~~~~~~~~~d~~~----~~~~~~~~~~~----~~~~~l~~ 394 (477)
...+.++|..+|.+ ++|.|+.+||..+++.+ +...+...+..+++.+|.++ ++.+|...+.. ...+.++.
T Consensus 24 ~~~i~~~f~~fd~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~ 103 (190)
T 1g8i_A 24 EKEVQQWYKGFIKDCPSGQLDAAGFQKIYKQFFPFGDPTKFATFVFNVFDENKDGRIEFSEFIQALSVTSRGTLDEKLRW 103 (190)
T ss_dssp HHHHHHHHHHHHHHCTTSEEEHHHHHHHHHHHCTTSCTHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHHCCHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCcCCHHHHHHHHHHhCCCCChHHHHHHHHHHHhcCCCCeEeHHHHHHHHHHhcCCCHHHHHHH
Confidence 44567777778877 89999999999999988 32356778999999998543 46666544322 23567899
Q ss_pred HhhhhcCCCCCCcCHHHHHHHHHH----cC--------CCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhhhCCCcHH
Q 042823 395 KFREMDTDNSDTLTLSELKAGLAK----LG--------SALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIYKLETPE 462 (477)
Q Consensus 395 ~F~~~D~~~~G~I~~~el~~~l~~----~g--------~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~ 462 (477)
+|+.+|.|++|.|+.+||..++.. +| ...+++++..+++.+|.|++|.|+|+||+.++... .
T Consensus 104 ~f~~~D~d~~G~i~~~e~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~i~~~ef~~~~~~~------~ 177 (190)
T 1g8i_A 104 AFKLYDLDNDGYITRNEMLDIVDAIYQMVGNTVELPEEENTPEKRVDRIFAMMDKNADGKLTLQEFQEGSKAD------P 177 (190)
T ss_dssp HHHHHCTTCSSEEEHHHHHHHHHHHHHHC-----CCGGGSSHHHHHHHHHHHHCSSCSSEEEHHHHHHHHHHC------H
T ss_pred HHHhhcCCCCCeECHHHHHHHHHHHHHHhCCccCCccccccHHHHHHHHHHHhcCCCCCcEeHHHHHHHHHhC------h
Confidence 999999999999999999999987 34 35778899999999999999999999999998753 2
Q ss_pred HHHHHHHHhc
Q 042823 463 LLEKAFQYLD 472 (477)
Q Consensus 463 ~l~~aF~~~D 472 (477)
.+...|..||
T Consensus 178 ~~~~~~~~~~ 187 (190)
T 1g8i_A 178 SIVQALSLYD 187 (190)
T ss_dssp HHHHHHCCBT
T ss_pred HHHHHHhhhc
Confidence 5677777765
|
| >2bl0_C Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum} | Back alignment and structure |
|---|
Probab=99.57 E-value=1e-14 Score=121.92 Aligned_cols=92 Identities=24% Similarity=0.434 Sum_probs=84.3
Q ss_pred hHHHHHHHHHhhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhhhC-CCcHHHH
Q 042823 386 TKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIYK-LETPELL 464 (477)
Q Consensus 386 ~~~~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~~~-~~~~~~l 464 (477)
++++.+++.+|+.+|.|++|.|+.+||..+|+.+|..+++.++..+++.+|.+++|.|+|+||+.++..... ....+.+
T Consensus 2 ~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~~ 81 (142)
T 2bl0_C 2 DDQVSEFKEAFELFDSERTGFITKEGLQTVLKQFGVRVEPAAFNEMFNEADATGNGKIQFPEFLSMMGRRMKQTTSEDIL 81 (142)
T ss_dssp CHHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHTCCCCHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHTTCCCHHHH
T ss_pred HHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCcCCCCeeeHHHHHHHHHHHhcCCChHHHH
Confidence 456789999999999999999999999999999999999999999999999999999999999999986433 4567889
Q ss_pred HHHHHHhccCCCC
Q 042823 465 EKAFQYLDKNSDQ 477 (477)
Q Consensus 465 ~~aF~~~D~d~~G 477 (477)
+.+|+.||+|++|
T Consensus 82 ~~~F~~~D~d~~G 94 (142)
T 2bl0_C 82 RQAFRTFDPEGTG 94 (142)
T ss_dssp HHHHHHTCCSSCS
T ss_pred HHHHHHHCCCCCC
Confidence 9999999999998
|
| >2be4_A Hypothetical protein LOC449832; DR.36843, BC083168, calicium binding, EF-hand superfamily, S genomics, protein structure initiative, PSI; 2.10A {Danio rerio} PDB: 2q4u_A | Back alignment and structure |
|---|
Probab=99.57 E-value=7.6e-15 Score=137.09 Aligned_cols=131 Identities=15% Similarity=0.269 Sum_probs=113.4
Q ss_pred hhHHHHHHhhhcCCCCCCCccHHHHHHHHHhh----CCCCCHHHHHH----HHHHhhcc----chHHHHHhcCCh-----
Q 042823 324 ETQALKEKFIEMDTDKNGTLSYDELRAGLTKV----GSMLTEFDVKH----LMEAVKNS----STLESLCENLPT----- 386 (477)
Q Consensus 324 ~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~----~~~~~~~~~~~----~~~~~d~~----~~~~~~~~~~~~----- 386 (477)
....+..+|..+|.+++|.|+.+||..++..+ |..++..++.. +++.+|.+ .++.+|...+..
T Consensus 102 ~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~D~~~dg~i~~~ef~~~~~~~~~~~ 181 (272)
T 2be4_A 102 NSVEFMKIWRKYDADSSGYISAAELKNFLKDLFLQHKKKIPPNKLDEYTDAMMKIFDKNKDGRLDLNDLARILALQENFL 181 (272)
T ss_dssp CHHHHHHHHHHHCTTCCSEEEGGGHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHCSSCSSEEEHHHHGGGSCCSSCSS
T ss_pred cHHHHHHHHHHhCCCCCCccCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHhccCCCCcCcHHHHHHHHhhhHHHH
Confidence 34568899999999999999999999999988 88888888755 78888754 358888887643
Q ss_pred -----------HHHHHHHHHhhhhcCCCCCCcCHHHHHHHHHHcCC----CCCHHHHHH----HHHHhcCCCCCcccHHH
Q 042823 387 -----------KEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGS----ALEESEVNQ----YMEAGDIDGNGNIDSIE 447 (477)
Q Consensus 387 -----------~~~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~----~~~~~~i~~----~~~~~d~~~~g~i~~~e 447 (477)
...+.++.+|+.+|+|++|+|+.+||+.+++.+|. .+++++++. +++.+|.|+||.|+|+|
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~E~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~D~d~dG~is~~E 261 (272)
T 2be4_A 182 LQFKMDASSQVERKRDFEKIFAHYDVSRTGALEGPEVDGFVKDMMELVRPSISGGDLDKFRECLLTHCDMNKDGKIQKSE 261 (272)
T ss_dssp TTSCCCHHHHHHHHHHHHHHHHHHCTTCCSEEETHHHHHHHHHHHHHHSSSCCHHHHHHHHHHHHHHHCCSTTCEEEHHH
T ss_pred hhhhhhhccccccHHHHHHHHHHhCCCCCCeecHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhCCCCCCcCcHHH
Confidence 23568999999999999999999999999998876 899999887 99999999999999999
Q ss_pred HHHHHHh
Q 042823 448 FVNLMTD 454 (477)
Q Consensus 448 F~~~~~~ 454 (477)
|+.++..
T Consensus 262 F~~~~~~ 268 (272)
T 2be4_A 262 LALCLGL 268 (272)
T ss_dssp HHHHTTC
T ss_pred HHHHHcc
Confidence 9998863
|
| >2ggz_A Guanylyl cyclase-activating protein 3; EF hand, guanylate cyclase activating protein, GCAP, GCAP3, GCAP-3, lyase activator; 3.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.57 E-value=2.9e-15 Score=134.60 Aligned_cols=126 Identities=21% Similarity=0.319 Sum_probs=103.9
Q ss_pred hHHHHHHhhhcCCC-CCCCccHHHHHHHHHhhCCCCCHHHHHHHHHHhhccchHHHHHhcCChHHHHHHHHHhhhhcCCC
Q 042823 325 TQALKEKFIEMDTD-KNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNSSTLESLCENLPTKEKQKLMEKFREMDTDN 403 (477)
Q Consensus 325 ~~~l~~~F~~~D~~-~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~F~~~D~~~ 403 (477)
..++.++|..+|.+ ++|.|+.+||..+++.++..+ ...+.+..+|+.+|.|+
T Consensus 18 ~~ei~~~f~~fD~~~~~G~is~~El~~~l~~~~~~~---------------------------~~~~~~~~~f~~~D~d~ 70 (211)
T 2ggz_A 18 TQETHVWYRTFMMEYPSGLQTLHEFKTLLGLQGLNQ---------------------------KANKHIDQVYNTFDTNK 70 (211)
T ss_dssp ------CCCSHHHHCTTSEEEHHHHHHHTTCCSCCH---------------------------HHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHHHHhCCCCcCCHHHHHHHHHHhCCCc---------------------------chHHHHHHHHHHHcCCC
Confidence 34567889999998 899999999999988776432 12345788899999999
Q ss_pred CCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhhh-----CCCc-HHHHHHHHHHhccCCCC
Q 042823 404 SDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIY-----KLET-PELLEKAFQYLDKNSDQ 477 (477)
Q Consensus 404 ~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~~-----~~~~-~~~l~~aF~~~D~d~~G 477 (477)
+|.|+.+||..++..++...+++++..+++.+|.|++|.|+++||..++.... ...+ ++.+..+|+.+|+|+||
T Consensus 71 dG~I~~~Ef~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~E~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~d~dG 150 (211)
T 2ggz_A 71 DGFVDFLEFIAAVNLIMQEKMEQKLKWYFKLYDADGNGSIDKNELLDMFMAVQALNGQQTLSPEEFINLVFHKIDINNDG 150 (211)
T ss_dssp SSEEEHHHHHHHHHHHSCSSHHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHTTSSCCCSCTHHHHHHHHHHHHCTTCSS
T ss_pred CCeEeHHHHHHHHHHhccCchHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHHHhhcCCccccHHHHHHHHHHHhCCCCCC
Confidence 99999999999999988888899999999999999999999999999998764 3233 45689999999999998
|
| >1dgu_A Calcium-saturated CIB; helical, EF-hands, blood clotting; NMR {Homo sapiens} SCOP: a.39.1.5 PDB: 1dgv_A 1xo5_A 1y1a_A* | Back alignment and structure |
|---|
Probab=99.57 E-value=3.2e-15 Score=131.08 Aligned_cols=133 Identities=21% Similarity=0.330 Sum_probs=110.5
Q ss_pred ccCCchhhHHHHHHhhhcCC-----CC-C--CCccHHHHHHHHHhhCCCCCHHHHHHHHHHhhc----c-chHHHHHhcC
Q 042823 318 EYLPDEETQALKEKFIEMDT-----DK-N--GTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKN----S-STLESLCENL 384 (477)
Q Consensus 318 ~~~~~~~~~~l~~~F~~~D~-----~~-~--G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~----~-~~~~~~~~~~ 384 (477)
..++.++...+.+.|..+|. ++ + |.|+.+||.. ++.+|..++..+ +++.+|. . .++.+|+..+
T Consensus 12 ~~ls~~~~~~l~~~F~~~D~~~~~~~~~~~~G~i~~~el~~-l~~~g~~~~~~~---l~~~~D~d~~G~~I~~~EF~~~~ 87 (183)
T 1dgu_A 12 TFLTKQEILLAHRRFCELLPQEQRSVESSLRAQVPFEQILS-LPELKANPFKER---ICRVFSTSPAKDSLSFEDFLDLL 87 (183)
T ss_dssp CSCCHHHHHHHHHHHHHHSCSTTCSSCCCTTTCSCHHHHHT-STTSSSCTTHHH---HHHHHSCSSSSCCCCHHHHHHHH
T ss_pred cCCCHHHHHHHHHHHHHhCccccccccccccCcCcHHHHHH-HHhhhcCcHHHH---HHHHhCCCCCCCEecHHHHHHHH
Confidence 34677888899999999999 68 8 9999999999 999998888754 4555552 3 5677776544
Q ss_pred Ch-----HHHHHHHHHhhhhcCCCCCCcCHHHHHHHHHHcCC-----CCCHHHHHH----HHHHhcCCCCCcccHHHHHH
Q 042823 385 PT-----KEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGS-----ALEESEVNQ----YMEAGDIDGNGNIDSIEFVN 450 (477)
Q Consensus 385 ~~-----~~~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~-----~~~~~~i~~----~~~~~d~~~~g~i~~~eF~~ 450 (477)
.. ...+.++.+|+.||.|++|+|+.+||+.++..+|. .+++++++. +++.+|.|++|.|+|+||+.
T Consensus 88 ~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~I~~~EF~~ 167 (183)
T 1dgu_A 88 SVFSDTATPDIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINLSEFQH 167 (183)
T ss_dssp HHHSTTCCHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHSSSCCCHHHHHHHHHHHHHHHHHHCTTSSSEEEHHHHHH
T ss_pred HHhcCCCCHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHHhcccccCCCCHHHHHHHHHHHHHHhCCCCCCeEcHHHHHH
Confidence 21 23468999999999999999999999999999876 688888886 99999999999999999999
Q ss_pred HHHh
Q 042823 451 LMTD 454 (477)
Q Consensus 451 ~~~~ 454 (477)
++..
T Consensus 168 ~~~~ 171 (183)
T 1dgu_A 168 VISR 171 (183)
T ss_dssp HHCS
T ss_pred HHHh
Confidence 9864
|
| >3pm8_A PFCDPK2, calcium-dependent protein kinase 2; malaria, structural genomics, structural genomics CONS SGC; 2.00A {Plasmodium falciparum K1} | Back alignment and structure |
|---|
Probab=99.56 E-value=3.1e-15 Score=132.81 Aligned_cols=101 Identities=25% Similarity=0.366 Sum_probs=81.7
Q ss_pred HHHHHhcCChHHHHHHHHHhhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhhh
Q 042823 377 LESLCENLPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIY 456 (477)
Q Consensus 377 ~~~~~~~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~~ 456 (477)
+..+...++.++++.++++|+.+|.|++|.|+.+||..+|+.+|..+++.+++.+++.+|.+++|.|+|+||+.++....
T Consensus 44 l~~i~~~l~~~e~~~l~~~F~~~D~d~~G~Is~~El~~~l~~~g~~~~~~~~~~l~~~~D~d~~g~I~~~EF~~~~~~~~ 123 (197)
T 3pm8_A 44 LTIIAKHLCDVEINNLRNIFIALDVDNSGTLSSQEILDGLKKIGYQKIPPDIHQVLRDIDSNASGQIHYTDFLAATIDKQ 123 (197)
T ss_dssp HHHHHHHCCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHC----CHHHHHHHHC-------CEEHHHHHHTTCCHH
T ss_pred HHHHHHHCCHHHHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHH
Confidence 45566778889999999999999999999999999999999999999999999999999999999999999999887655
Q ss_pred CCCcHHHHHHHHHHhccCCCC
Q 042823 457 KLETPELLEKAFQYLDKNSDQ 477 (477)
Q Consensus 457 ~~~~~~~l~~aF~~~D~d~~G 477 (477)
....++.++.+|+.||+|++|
T Consensus 124 ~~~~~~~l~~~F~~~D~d~~G 144 (197)
T 3pm8_A 124 TYLKKEVCLIPFKFFDIDGNG 144 (197)
T ss_dssp HHCSHHHHHHHHHHHCTTCSS
T ss_pred hhhhHHHHHHHHHHHCCCCCC
Confidence 556678999999999999998
|
| >1dtl_A Cardiac troponin C; helix-turn-helix, structural protein; HET: BEP; 2.15A {Gallus gallus} SCOP: a.39.1.5 PDB: 1j1d_A 1j1e_A 2jt3_A 2jt0_A 1la0_A 2jtz_A* 2jt8_A* 2kfx_T* 1wrk_A* 1wrl_A* 1ap4_A 1lxf_C* 1mxl_C 1spy_A 2krd_C* 2l1r_A* 3rv5_A* 2ctn_A 2kgb_C 2jxl_A ... | Back alignment and structure |
|---|
Probab=99.56 E-value=1.6e-14 Score=123.51 Aligned_cols=98 Identities=26% Similarity=0.383 Sum_probs=88.7
Q ss_pred HHhcCChHHHHHHHHHhhhhcCCC-CCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhhhC-
Q 042823 380 LCENLPTKEKQKLMEKFREMDTDN-SDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIYK- 457 (477)
Q Consensus 380 ~~~~~~~~~~~~l~~~F~~~D~~~-~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~~~- 457 (477)
....++.+++++++.+|..+|.|+ +|.|+.+||..+++.+|..+++.++..+++.+|.+++|.|+|+||+.++.....
T Consensus 8 ~~~~l~~~~~~~l~~~F~~~D~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~eF~~~~~~~~~~ 87 (161)
T 1dtl_A 8 AVEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKD 87 (161)
T ss_dssp GGGGSCHHHHHHHHHHHHHHTTTCGGGSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTSSSSBCHHHHHHHHHHHHC-
T ss_pred HHhhCCHHHHHHHHHHHHHHcCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHhcc
Confidence 345678888999999999999999 999999999999999999999999999999999999999999999999887653
Q ss_pred ---CCcHHHHHHHHHHhccCCCC
Q 042823 458 ---LETPELLEKAFQYLDKNSDQ 477 (477)
Q Consensus 458 ---~~~~~~l~~aF~~~D~d~~G 477 (477)
....+.+..+|+.||+|++|
T Consensus 88 ~~~~~~~~~~~~~F~~~D~d~~G 110 (161)
T 1dtl_A 88 DSKGKSEEELSDLFRMFDKNADG 110 (161)
T ss_dssp ----CHHHHHHHHHHHHCTTCSS
T ss_pred cccchHHHHHHHHHHHhCCCCCC
Confidence 34567899999999999998
|
| >1ij5_A Plasmodial specific LAV1-2 protein; fourty kDa calcium binding protein, CBP40, metal binding protein; 3.00A {Physarum polycephalum} SCOP: a.39.1.9 PDB: 1ij6_A | Back alignment and structure |
|---|
Probab=99.55 E-value=3e-15 Score=143.11 Aligned_cols=130 Identities=22% Similarity=0.233 Sum_probs=113.9
Q ss_pred hhhHHHHHHhhhcCCCCCCCccHHHHHHHHHhhCCCCCHHHHHH-HHHHhhccc----hHHHHHhcCChHHHHHHHHHhh
Q 042823 323 EETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKH-LMEAVKNSS----TLESLCENLPTKEKQKLMEKFR 397 (477)
Q Consensus 323 ~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~-~~~~~d~~~----~~~~~~~~~~~~~~~~l~~~F~ 397 (477)
.....+..+|..+|.+++|.|+.+||..++ +|..++..++.. ++..+|.++ ++.+|+..+.... .+..+|+
T Consensus 185 ~~~~~l~~~F~~~D~d~dG~Is~~El~~~l--~g~~~~~~ei~~~l~~~~D~d~dG~Is~~EF~~~l~~~~--~l~~~F~ 260 (323)
T 1ij5_A 185 NDLAALVADFRKIDTNSNGTLSRKEFREHF--VRLGFDKKSVQDALFRYADEDESDDVGFSEYVHLGLCLL--VLRILYA 260 (323)
T ss_dssp HHHHTSCCCHHHHCTTCCSEECHHHHHHHH--HHTTCCCHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHH--HHHHHHH
T ss_pred hHHHHHHHHHHHHCCCCCCcCcHHHHHHHH--cCCCCCHHHHHHHHHHHhcCCCCCEEeHHHHHHHHHHHH--HHHHHHH
Confidence 344556778999999999999999999999 888889999999 999997543 5777776554332 7899999
Q ss_pred hhcCCCCCCcCHHHHHHHH-HHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhhh
Q 042823 398 EMDTDNSDTLTLSELKAGL-AKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIY 456 (477)
Q Consensus 398 ~~D~~~~G~I~~~el~~~l-~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~~ 456 (477)
.||.|++|+|+.+||..++ ..+|..++++++..++..+|.|+||.|+|+||+.++...+
T Consensus 261 ~~D~d~dG~Is~~El~~~l~~~~g~~ls~~e~~~l~~~~D~d~dG~Is~~EF~~~~~~~~ 320 (323)
T 1ij5_A 261 FADFDKSGQLSKEEVQKVLEDAHIPESARKKFEHQFSVVDVDDSKSLSYQEFVMLVLLMF 320 (323)
T ss_dssp HTCSSSCSSEEHHHHHHHHHHTTCCGGGCSTHHHHHHHHTTTTCSEECHHHHHHHHHHHC
T ss_pred HhCCCCCCCccHHHHHHHHHHHcCCCCCHHHHHHHHHHHCCCCCCcEeHHHHHHHHHHhc
Confidence 9999999999999999999 9999999999999999999999999999999999987643
|
| >3k21_A PFCDPK3, calcium-dependent protein kinase 3; calcium kinase structural genomics malaria, structural genom consortium, SGC, ATP-binding; 1.15A {Plasmodium falciparum} PDB: 3o4y_A | Back alignment and structure |
|---|
Probab=99.55 E-value=1.6e-14 Score=127.59 Aligned_cols=99 Identities=27% Similarity=0.383 Sum_probs=90.1
Q ss_pred HHHHHhcCChHHHHHHHHHhhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhhh
Q 042823 377 LESLCENLPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIY 456 (477)
Q Consensus 377 ~~~~~~~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~~ 456 (477)
+..+...++.+++++++++|+.+|.|++|.|+.+||..+++.+|..++ .++..+++.+|.+++|.|+|+||+.++....
T Consensus 39 l~~~~~~l~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~g~~~~-~~~~~l~~~~D~d~~g~i~~~EF~~~~~~~~ 117 (191)
T 3k21_A 39 MTIIAQQSNDYDVEKLKSTFLVLDEDGKGYITKEQLKKGLEKDGLKLP-YNFDLLLDQIDSDGSGKIDYTEFIAAALDRK 117 (191)
T ss_dssp HHHHHHHCCCHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCC-TTHHHHHHHHCTTCSSSEEHHHHHHHHSCGG
T ss_pred HHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHcCCCcH-HHHHHHHHHhCCCCCCeEeHHHHHHHHHhhh
Confidence 455667788999999999999999999999999999999999999988 8999999999999999999999999986544
Q ss_pred CCCcHHHHHHHHHHhccCCCC
Q 042823 457 KLETPELLEKAFQYLDKNSDQ 477 (477)
Q Consensus 457 ~~~~~~~l~~aF~~~D~d~~G 477 (477)
....+.+..+|+.||+|++|
T Consensus 118 -~~~~~~l~~~F~~~D~d~~G 137 (191)
T 3k21_A 118 -QLSKKLIYCAFRVFDVDNDG 137 (191)
T ss_dssp -GCCHHHHHHHHHHHSTTCSS
T ss_pred -hccHHHHHHHHHHhCCCCCC
Confidence 35667899999999999998
|
| >2jul_A Calsenilin; EF-hand, calcium, LXXLL, DNA binding protein, dimer, alternative splicing, apoptosis, cytoplasm, endoplasmic reticulum, golgi apparatus; NMR {Mus musculus} | Back alignment and structure |
|---|
Probab=99.55 E-value=2.4e-14 Score=132.59 Aligned_cols=146 Identities=16% Similarity=0.202 Sum_probs=114.7
Q ss_pred CCchhhHHHHHHhhhcCCCCCCCccHHHHHHHHHhhC-CCCCHHHHHHHHHHhhccc----hHHHHHhcCC----hHHHH
Q 042823 320 LPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVG-SMLTEFDVKHLMEAVKNSS----TLESLCENLP----TKEKQ 390 (477)
Q Consensus 320 ~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~-~~~~~~~~~~~~~~~d~~~----~~~~~~~~~~----~~~~~ 390 (477)
++.+++..+...|.. .+++|.|+.+||..++..++ ...+..++..+++.+|.++ ++.+|...+. ....+
T Consensus 88 ~s~~ei~~l~~~fd~--~~~~G~I~~~ef~~~l~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~l~~~~~~~~~~ 165 (256)
T 2jul_A 88 FTKKELQSLYRGFKN--ECPTGLVDEDTFKLIYSQFFPQGDATTYAHFLFNAFDADGNGAIHFEDFVVGLSILLRGTVHE 165 (256)
T ss_dssp SCHHHHHHHHHHHHH--HCTTSSEEHHHHHHHHHHHCCSSCCHHHHHHHHHHSSCSCCSEECSHHHHHHHHHHHSCCHHH
T ss_pred CCHHHHHHHHHHHHh--hCCCCcCCHHHHHHHHHHHcccCCcHHHHHHHHHHhccCCCCcCcHHHHHHHHHHHhccChHH
Confidence 455555555444443 24799999999999999986 4677889999999998643 3555544332 23456
Q ss_pred HHHHHhhhhcCCCCCCcCHHHHHHHHHHc----C--------CCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhhhCC
Q 042823 391 KLMEKFREMDTDNSDTLTLSELKAGLAKL----G--------SALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIYKL 458 (477)
Q Consensus 391 ~l~~~F~~~D~~~~G~I~~~el~~~l~~~----g--------~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~ 458 (477)
+++.+|+.+|.|++|+|+.+||..++..+ | ...++++++.+++.+|.|+||.|+|+||+.++....
T Consensus 166 ~l~~~F~~~D~d~dG~I~~~Ef~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~Is~~Ef~~~~~~~~-- 243 (256)
T 2jul_A 166 KLKWAFNLYDINKDGCITKEEMLAIMKSIYDMMGRHTYPILREDAPLEHVERFFQKMDRNQDGVVTIDEFLETCQKDE-- 243 (256)
T ss_dssp HHHHHHHHTCCSSSSCBCHHHHHHHHHHHHHHCCCCCSCCSCCCCHHHHHHHHHHHSCCSTTCSBCHHHHHHHHHHCS--
T ss_pred HHHHHHHHhCCCCCCcCcHHHHHHHHHHHHHHhCCCCCcccchhhHHHHHHHHHHHHCCCCCCcEeHHHHHHHHHhCH--
Confidence 89999999999999999999999999876 5 345788999999999999999999999999997532
Q ss_pred CcHHHHHHHHHHhcc
Q 042823 459 ETPELLEKAFQYLDK 473 (477)
Q Consensus 459 ~~~~~l~~aF~~~D~ 473 (477)
.+.++|..||+
T Consensus 244 ----~l~~~l~~~d~ 254 (256)
T 2jul_A 244 ----NIMNSMQLFEN 254 (256)
T ss_dssp ----SHHHHHHHHHH
T ss_pred ----HHHHHHHhhcc
Confidence 57788888874
|
| >4ds7_A Calmodulin, CAM; protein binding, metal binding, structura; 2.15A {Kluyveromyces lactis} PDB: 1lkj_A 2lhh_A 1f54_A 1f55_A | Back alignment and structure |
|---|
Probab=99.55 E-value=1.2e-14 Score=122.14 Aligned_cols=97 Identities=35% Similarity=0.502 Sum_probs=86.8
Q ss_pred HhcCChHHHHHHHHHhhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhhhC-CC
Q 042823 381 CENLPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIYK-LE 459 (477)
Q Consensus 381 ~~~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~~~-~~ 459 (477)
...++.++...++.+|+.+|.|++|.|+.+||..+++.+|..+++.++..+++.+|.+++|.|+|+||+.++..... ..
T Consensus 2 ~~~l~~~~~~~l~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~i~~~ef~~~~~~~~~~~~ 81 (147)
T 4ds7_A 2 SQNLTEEQIAEFKEAFALFDKDNSGSISASELATVMRSLGLSPSEAEVADLMNEIDVDGNHAIEFSEFLALMSRQLKCND 81 (147)
T ss_dssp --CCCHHHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTSSSEEEHHHHHHHHHHHHHTHH
T ss_pred CCcCCHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHHhCCCCCHHHHHHHHHHhccCCCCcCcHHHHHHHHHHhccCCC
Confidence 45678888999999999999999999999999999999999999999999999999999999999999999876543 23
Q ss_pred cHHHHHHHHHHhccCCCC
Q 042823 460 TPELLEKAFQYLDKNSDQ 477 (477)
Q Consensus 460 ~~~~l~~aF~~~D~d~~G 477 (477)
..+.+..+|+.+|+|++|
T Consensus 82 ~~~~~~~~F~~~D~d~~G 99 (147)
T 4ds7_A 82 SEQELLEAFKVFDKNGDG 99 (147)
T ss_dssp HHHHHHHHHHHHCTTCSS
T ss_pred cHHHHHHHHHHhCCCCCC
Confidence 457899999999999998
|
| >3ox6_A Calcium-binding protein 1; EF-hand, calcium-sensor; 2.40A {Homo sapiens} PDB: 3ox5_A 2lan_A 2lap_A 2k7b_A 2k7c_A 2k7d_A | Back alignment and structure |
|---|
Probab=99.55 E-value=1.2e-14 Score=122.94 Aligned_cols=96 Identities=28% Similarity=0.393 Sum_probs=87.4
Q ss_pred hcCChHHHHHHHHHhhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhhhCCCc-
Q 042823 382 ENLPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIYKLET- 460 (477)
Q Consensus 382 ~~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~~~- 460 (477)
..++.+++++++.+|..+|.|++|.|+.+||..+++.+|..+++.++..+++.+|.+++|.|+|+||+.++........
T Consensus 3 ~~l~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~ 82 (153)
T 3ox6_A 3 RSLRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFDDFVELMGPKLLAETA 82 (153)
T ss_dssp SCCCHHHHHHHHHHHHHHHHHCSSSCCHHHHHHHHHHTTCCCCHHHHHHHHHHHHTTSTTCCCHHHHHHHHHHHHTTCCH
T ss_pred ccCCHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCccCcHHHHHHHHHHHhhcccc
Confidence 4577888999999999999999999999999999999999999999999999999999999999999999976544332
Q ss_pred ----HHHHHHHHHHhccCCCC
Q 042823 461 ----PELLEKAFQYLDKNSDQ 477 (477)
Q Consensus 461 ----~~~l~~aF~~~D~d~~G 477 (477)
.+.+..+|+.+|+|++|
T Consensus 83 ~~~~~~~~~~~F~~~D~d~~G 103 (153)
T 3ox6_A 83 DMIGVKELRDAFREFDTNGDG 103 (153)
T ss_dssp HHHCHHHHHHHHHHHCTTCSS
T ss_pred ccccHHHHHHHHHHhCCCCCC
Confidence 47899999999999998
|
| >2jnf_A Troponin C; stretch activated muscle contraction, EF-hand, metal binding protein; NMR {Lethocerus indicus} PDB: 2k2a_A | Back alignment and structure |
|---|
Probab=99.55 E-value=1.4e-14 Score=123.43 Aligned_cols=95 Identities=23% Similarity=0.340 Sum_probs=86.8
Q ss_pred cCChHHHHHHHHHhhhhc-CCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhhhCC---
Q 042823 383 NLPTKEKQKLMEKFREMD-TDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIYKL--- 458 (477)
Q Consensus 383 ~~~~~~~~~l~~~F~~~D-~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~--- 458 (477)
.++.+++.+++.+|..+| .|++|.|+.+||..+|+.+|..+++.++..+++.+|.+++|.|+|+||+.++......
T Consensus 6 ~l~~~~~~~l~~~F~~~D~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~eF~~~~~~~~~~~~~ 85 (158)
T 2jnf_A 6 KLSSNQVKLLETAFRDFETPEGSGRVSTDQIGIILEVLGIQQTKSTIRQLIDEFDPFGNGDIDFDSFKIIGARFLGEEVN 85 (158)
T ss_dssp TSCHHHHHHHHHHHHHSBCSSSCSSEEHHHHHHHHHHTTCSCSHHHHHHHHHHHCTTCCSEECHHHHHHHHHHHCCCCCC
T ss_pred hCCHHHHHHHHHHHHHhCCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhccccc
Confidence 467788899999999999 9999999999999999999999999999999999999999999999999999765442
Q ss_pred --CcHHHHHHHHHHhccCCCC
Q 042823 459 --ETPELLEKAFQYLDKNSDQ 477 (477)
Q Consensus 459 --~~~~~l~~aF~~~D~d~~G 477 (477)
...+.++.+|+.||+|++|
T Consensus 86 ~~~~~~~~~~~F~~~D~d~~G 106 (158)
T 2jnf_A 86 PEQMQQELREAFRLYDKEGNG 106 (158)
T ss_dssp TTTTSSTHHHHHHHHCSSSSS
T ss_pred hhhHHHHHHHHHHHhCCCCCC
Confidence 4456799999999999998
|
| >2l4h_A Calcium and integrin-binding protein 1; metal binding protei; NMR {Homo sapiens} PDB: 2l4i_A 2lm5_A | Back alignment and structure |
|---|
Probab=99.54 E-value=3.4e-15 Score=134.33 Aligned_cols=133 Identities=21% Similarity=0.334 Sum_probs=110.0
Q ss_pred ccCCchhhHHHHHHhhhcCC-----CC-C--CCccHHHHHHHHHhhCCCCCHHHHHHHHHHhhc----c-chHHHHHhcC
Q 042823 318 EYLPDEETQALKEKFIEMDT-----DK-N--GTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKN----S-STLESLCENL 384 (477)
Q Consensus 318 ~~~~~~~~~~l~~~F~~~D~-----~~-~--G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~----~-~~~~~~~~~~ 384 (477)
..++..++..+...|..+|. |+ + |.|+.+||.. +..+|..++.. ++++.+|. . .+|.+|+..+
T Consensus 43 t~~s~~ei~~l~~~F~~~D~~~~~~d~~~~dG~I~~~E~~~-l~~lg~~~~~~---~lf~~~D~d~dG~~I~f~EF~~~~ 118 (214)
T 2l4h_A 43 TFLTKQEILLAHRRFCELLPQEQRSVESSLRAQVPFEQILS-LPELKANPFKE---RICRVFSTSPAKDSLSFEDFLDLL 118 (214)
T ss_dssp CSCCHHHHHHHHHHHHHHSCGGGCCHHHHTTSEECHHHHTT-CHHHHTSTTHH---HHHHHHCCSSSCCSEEHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHhCcccccccccccCCcCCHHHHHH-hhccCCChHHH---HHHHHhCcCCCCCEecHHHHHHHH
Confidence 35688889999999999998 66 6 9999999999 99999888765 45666653 3 5677776543
Q ss_pred C-----hHHHHHHHHHhhhhcCCCCCCcCHHHHHHHHHHcCC-----CCCHHHHHH----HHHHhcCCCCCcccHHHHHH
Q 042823 385 P-----TKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGS-----ALEESEVNQ----YMEAGDIDGNGNIDSIEFVN 450 (477)
Q Consensus 385 ~-----~~~~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~-----~~~~~~i~~----~~~~~d~~~~g~i~~~eF~~ 450 (477)
. ....++++.+|+.||.|++|+|+.+||+.++..+|. .+++++++. +++.+|.|+||.|+|+||+.
T Consensus 119 ~~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~~~~~~~~~s~~e~~~~~~~~~~~~D~d~dG~Is~~EF~~ 198 (214)
T 2l4h_A 119 SVFSDTATPDIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINLSEFQH 198 (214)
T ss_dssp HHTSSCSCHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHHHSSSCTTCSCTHHHHHHHHHHHHHCCSCCSSBCSHHHHH
T ss_pred HHHcCCCCHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHHhccccCCCCCHHHHHHHHHHHHHHhCCCCCCcCCHHHHHH
Confidence 2 123568999999999999999999999999999875 788777775 99999999999999999999
Q ss_pred HHHh
Q 042823 451 LMTD 454 (477)
Q Consensus 451 ~~~~ 454 (477)
++..
T Consensus 199 ~~~~ 202 (214)
T 2l4h_A 199 VISR 202 (214)
T ss_dssp HHHT
T ss_pred HHHh
Confidence 9875
|
| >3fwb_A Cell division control protein 31; gene gating, complex, cell cycle, cell division, mitosis, MR transport, nuclear pore complex, nucleus, phosphoprotein; 2.50A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2gv5_A 2doq_A 3fwc_A | Back alignment and structure |
|---|
Probab=99.54 E-value=2.7e-14 Score=122.03 Aligned_cols=96 Identities=24% Similarity=0.373 Sum_probs=87.7
Q ss_pred hcCChHHHHHHHHHhhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhhhC-CCc
Q 042823 382 ENLPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIYK-LET 460 (477)
Q Consensus 382 ~~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~~~-~~~ 460 (477)
..++.+++.+++.+|..+|.|++|.|+.+||..+++.+|..+++.++..+++.+|.+++|.|+|+||+.++..... ...
T Consensus 15 ~~l~~~~~~~l~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~ 94 (161)
T 3fwb_A 15 SELLEEQKQEIYEAFSLFDMNNDGFLDYHELKVAMKALGFELPKREILDLIDEYDSEGRHLMKYDDFYIVMGEKILKRDP 94 (161)
T ss_dssp TTSCHHHHHHHHHHHHHHCTTSSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTSSSCEEHHHHHHHHHHHHHTCCH
T ss_pred CCCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCcCCCCeEeHHHHHHHHHHHHhcCCc
Confidence 3467788999999999999999999999999999999999999999999999999999999999999999876544 445
Q ss_pred HHHHHHHHHHhccCCCC
Q 042823 461 PELLEKAFQYLDKNSDQ 477 (477)
Q Consensus 461 ~~~l~~aF~~~D~d~~G 477 (477)
.+.+..+|+.||+|++|
T Consensus 95 ~~~~~~~F~~~D~d~~G 111 (161)
T 3fwb_A 95 LDEIKRAFQLFDDDHTG 111 (161)
T ss_dssp HHHHHHHHHHHCTTCSS
T ss_pred HHHHHHHHHHHcCCCCC
Confidence 67899999999999998
|
| >3h4s_E KCBP interacting Ca2+-binding protein; kinesin, motor protein, regulation, complex, calcium, EF- hand, calmodulin, ATP-binding, microtubule; HET: ADP; 2.40A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=99.54 E-value=1e-14 Score=121.00 Aligned_cols=102 Identities=18% Similarity=0.334 Sum_probs=68.6
Q ss_pred HHHHhhhcCCCCCCCccHHHHHHHHHhhCCCCCHHHHHHHHHHhhccchHHHHHhcCChHHHHHHHHHhhhhcCCCCCCc
Q 042823 328 LKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNSSTLESLCENLPTKEKQKLMEKFREMDTDNSDTL 407 (477)
Q Consensus 328 l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~F~~~D~~~~G~I 407 (477)
.+++|..+|.+++|.|+++||..++.... . .....++++.+|+.||+|++|+|
T Consensus 5 ~~~l~~~~D~d~~G~I~~~EF~~~~~~~~---~------------------------~~~~~~~l~~~F~~~D~d~~G~I 57 (135)
T 3h4s_E 5 EKSMLLETTSTTKMETKYEDMLPVMAEKM---D------------------------VEEFVSELCKGFSLLADPERHLI 57 (135)
T ss_dssp --------------CCCC--------------C------------------------HHHHHHHHHHHHHHHSBTTTTBB
T ss_pred HHHHHHHHcCCCCCcEeHHHHHHHHHHHc---c------------------------ccchHHHHHHHHHHHCCCCCCcC
Confidence 46789999999999999999987654421 0 01234678999999999999999
Q ss_pred CHHHHHHHHHHcC-CCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhhh
Q 042823 408 TLSELKAGLAKLG-SALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIY 456 (477)
Q Consensus 408 ~~~el~~~l~~~g-~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~~ 456 (477)
+.+||+.+++.+| ..+++++++.+++.+|.|+||.|+|+||+.++....
T Consensus 58 ~~~el~~~l~~~g~~~~~~~e~~~~~~~~D~d~dG~I~~~EF~~~~~~~~ 107 (135)
T 3h4s_E 58 TAESLRRNSGILGIEGMSKEDAQGMVREGDLDGDGALNQTEFCVLMVRLS 107 (135)
T ss_dssp CHHHHHHHGGGGTCCCCCHHHHHHHHHHHCSSCSSSBCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHhCCCCCCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhC
Confidence 9999999999999 499999999999999999999999999999997643
|
| >4drw_A Protein S100-A10/annexin A2 chimeric protein; atypical EF-hand, heteropentameric complex, membrane repair; 3.50A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.54 E-value=7.3e-15 Score=117.57 Aligned_cols=89 Identities=18% Similarity=0.264 Sum_probs=73.2
Q ss_pred HHHHHHHHHhhhhcCCCCCCcCHHHHHHHHHH-----cCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhhhC----
Q 042823 387 KEKQKLMEKFREMDTDNSDTLTLSELKAGLAK-----LGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIYK---- 457 (477)
Q Consensus 387 ~~~~~l~~~F~~~D~~~~G~I~~~el~~~l~~-----~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~~~---- 457 (477)
..++.++.+|+.||.| +|+|+.+||+.+|+. +|..+++++++++++.+|.|+||.|+|+||+.+|.....
T Consensus 12 ~~ie~l~~~F~~yd~d-dG~Is~~EL~~~l~~~~~~~l~~~~~~~~v~~~i~~~D~d~DG~IdF~EF~~lm~~l~~~~he 90 (121)
T 4drw_A 12 HAMETMMFTFHKFAGD-KGYLTKEDLRVLMEKEFPGFLENQKDPLAVDKIMKDLDQCRDGKVGFQSFFSLIAGLTIACND 90 (121)
T ss_dssp HHHHHHHHTTGGGSCT-TCSCCHHHHHHHTTTSCHHHHTTSSCTTHHHHHHHHHCTTCSSCCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCC-CCEEcHHHHHHHHHHHhhhhcccCCCHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHHHHHHHH
Confidence 3467899999999988 899999999999987 788999999999999999999999999999999864221
Q ss_pred ----C--------CcHHHHHHHHHHhccCCC
Q 042823 458 ----L--------ETPELLEKAFQYLDKNSD 476 (477)
Q Consensus 458 ----~--------~~~~~l~~aF~~~D~d~~ 476 (477)
. .....+.++|+.+|.|||
T Consensus 91 ~f~~~~k~~~~~~~~d~~~~e~~~~~d~~gd 121 (121)
T 4drw_A 91 YFVVHMKQENLYFQGDSTVHEILSKLSLEGD 121 (121)
T ss_dssp HHTTSCC---------CCHHHHHHHCCC---
T ss_pred HHHHHHHHhccCCCCchHHHHHHHHhcccCC
Confidence 0 122458999999999987
|
| >2f2o_A Calmodulin fused with calmodulin-binding domain of calcineurin; EF-hands, calcium, metal binding protein; 2.17A {Bos taurus} PDB: 2f2p_A | Back alignment and structure |
|---|
Probab=99.53 E-value=2.1e-14 Score=125.26 Aligned_cols=96 Identities=30% Similarity=0.498 Sum_probs=84.5
Q ss_pred hcCChHHHHHHHHHhhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhhhC-CCc
Q 042823 382 ENLPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIYK-LET 460 (477)
Q Consensus 382 ~~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~~~-~~~ 460 (477)
..++.+++.+++.+|..+|.|++|.|+.+||..+|+.+|..+++.++..+++.+|.+++|.|+|+||+.++..... ...
T Consensus 3 ~~l~~~~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~EF~~~~~~~~~~~~~ 82 (179)
T 2f2o_A 3 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDS 82 (179)
T ss_dssp ---CCSHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHHHHHHH
T ss_pred ccCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhccCCCCCCcHHHHHHHHHHHccCccc
Confidence 4567788899999999999999999999999999999999999999999999999999999999999998876432 234
Q ss_pred HHHHHHHHHHhccCCCC
Q 042823 461 PELLEKAFQYLDKNSDQ 477 (477)
Q Consensus 461 ~~~l~~aF~~~D~d~~G 477 (477)
.+.+..+|+.||+|++|
T Consensus 83 ~~~~~~~F~~~D~d~~G 99 (179)
T 2f2o_A 83 EEEIREAFRVFDKDGNG 99 (179)
T ss_dssp HHHHHHHHHHHCTTCSS
T ss_pred HHHHHHHHHHhCCCCCC
Confidence 46799999999999998
|
| >2pvb_A Protein (parvalbumin); calcium binding protein, metal binding protein; 0.91A {Esox lucius} SCOP: a.39.1.4 PDB: 1pvb_A 2pal_A 1pal_A 3pal_A 4pal_A 4cpv_A 1cdp_A 5cpv_A 1b8r_A 1b9a_A 1b8l_A 1b8c_A 1a75_B 1a75_A | Back alignment and structure |
|---|
Probab=99.53 E-value=2.2e-14 Score=113.97 Aligned_cols=66 Identities=29% Similarity=0.469 Sum_probs=62.2
Q ss_pred HHHHHHHHhhhhcCCCCCCcCHHHHHHHHHHc---CCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHH
Q 042823 388 EKQKLMEKFREMDTDNSDTLTLSELKAGLAKL---GSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMT 453 (477)
Q Consensus 388 ~~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~---g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~ 453 (477)
..+.++.+|+.||+|++|+|+.+||+.+++.+ |..+++++++.+++.+|.+++|.|+|+||+.++.
T Consensus 39 ~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~ 107 (108)
T 2pvb_A 39 SLDDVKKAFYVIDQDKSGFIEEDELKLFLQNFSPSARALTDAETKAFLADGDKDGDGMIGVDEFAAMIK 107 (108)
T ss_dssp CHHHHHHHHHHHCTTCSSSBCHHHHHTGGGGTCTTSCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHHhccCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHh
Confidence 35688999999999999999999999999999 8899999999999999999999999999999875
|
| >1bu3_A Calcium-binding protein; 1.65A {Merluccius bilinearis} SCOP: a.39.1.4 | Back alignment and structure |
|---|
Probab=99.53 E-value=2.8e-14 Score=113.59 Aligned_cols=66 Identities=30% Similarity=0.478 Sum_probs=62.2
Q ss_pred HHHHHHHHhhhhcCCCCCCcCHHHHHHHHHHc---CCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHH
Q 042823 388 EKQKLMEKFREMDTDNSDTLTLSELKAGLAKL---GSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMT 453 (477)
Q Consensus 388 ~~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~---g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~ 453 (477)
..+.++.+|+.||+|++|+|+.+||+.+++.+ |..+++++++.+++.+|.+++|.|+|+||+.++.
T Consensus 40 ~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~ 108 (109)
T 1bu3_A 40 SADDIKKAFFVIDQDKSGFIEEDELKLFLQVFSAGARALTDAETKAFLKAGDSDGDGAIGVDEWAALVK 108 (109)
T ss_dssp CHHHHHHHHHHHCTTCSSSEEHHHHHTHHHHHSTTCCCCCHHHHHHHHHHHCTTCSSEECHHHHHHHHT
T ss_pred hHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHHcccCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHh
Confidence 35689999999999999999999999999999 8899999999999999999999999999998874
|
| >5pal_A Parvalbumin; calcium-binding protein; 1.54A {Triakis semifasciata} SCOP: a.39.1.4 | Back alignment and structure |
|---|
Probab=99.53 E-value=2.8e-14 Score=113.64 Aligned_cols=97 Identities=25% Similarity=0.408 Sum_probs=80.7
Q ss_pred HHHHHHhhhcCCCCCCCccHHHHHHHHHhhCCCCCHHHHHHHHHHhhccchHHHHHhcCChHHHHHHHHHhhhhcCCCCC
Q 042823 326 QALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNSSTLESLCENLPTKEKQKLMEKFREMDTDNSD 405 (477)
Q Consensus 326 ~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~F~~~D~~~~G 405 (477)
..+.++|..+|. +|.|+++|+..++... ....++++.+|+.||+|++|
T Consensus 9 ~ei~~~~~~~d~--~g~i~~~eF~~~~~~~------------------------------~~~~~~l~~~F~~~D~d~~G 56 (109)
T 5pal_A 9 DDINKAISAFKD--PGTFDYKRFFHLVGLK------------------------------GKTDAQVKEVFEILDKDQSG 56 (109)
T ss_dssp HHHHHHHHHTCS--TTCCCHHHHHHHHTCT------------------------------TCCHHHHHHHHHHHCTTCSS
T ss_pred HHHHHHHHHhCC--CCcCcHHHHHHHHhhc------------------------------cCcHHHHHHHHHHHCCCCCC
Confidence 345666666665 7788888876654321 12346789999999999999
Q ss_pred CcCHHHHHHHHHHc---CCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHh
Q 042823 406 TLTLSELKAGLAKL---GSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTD 454 (477)
Q Consensus 406 ~I~~~el~~~l~~~---g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~ 454 (477)
+|+.+||+.+++.+ |..+++++++.+++.+|.|++|.|+|+||+.++..
T Consensus 57 ~i~~~el~~~l~~~~~~g~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~ 108 (109)
T 5pal_A 57 FIEEEELKGVLKGFSAHGRDLNDTETKALLAAGDSDHDGKIGADEFAKMVAQ 108 (109)
T ss_dssp EECHHHHHTHHHHHCTTCCCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHH
T ss_pred cCcHHHHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHh
Confidence 99999999999998 99999999999999999999999999999998864
|
| >3qrx_A Centrin; calcium-binding, EF-hand, cell division, calcium binding, ME binding protein-toxin complex; 2.20A {Chlamydomonas reinhardtii} PDB: 2ggm_A 2ami_A 1zmz_A | Back alignment and structure |
|---|
Probab=99.53 E-value=2.7e-14 Score=123.22 Aligned_cols=95 Identities=33% Similarity=0.496 Sum_probs=85.4
Q ss_pred cCChHHHHHHHHHhhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhhhC-CCcH
Q 042823 383 NLPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIYK-LETP 461 (477)
Q Consensus 383 ~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~~~-~~~~ 461 (477)
.++.+++++++++|+.+|.|++|.|+.+||..+|+.+|..+++.++..++..+|.+++|.|+|+||+.++..... ....
T Consensus 21 ~l~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~ 100 (169)
T 3qrx_A 21 GLTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTIDFEEFLTMMTAKMGERDSR 100 (169)
T ss_dssp CCCHHHHHHHHHHHHHHCTTCCSEECHHHHHHHHHHTSCCCCHHHHHHHHHHHCSSSSSSEEHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcCCHHHHHHHHHHHhcccCcH
Confidence 467788899999999999999999999999999999999999999999999999999999999999999875433 2235
Q ss_pred HHHHHHHHHhccCCCC
Q 042823 462 ELLEKAFQYLDKNSDQ 477 (477)
Q Consensus 462 ~~l~~aF~~~D~d~~G 477 (477)
+.+..+|+.||+|++|
T Consensus 101 ~~~~~~F~~~D~d~~G 116 (169)
T 3qrx_A 101 EEILKAFRLFDDDNSG 116 (169)
T ss_dssp HHHHHHHHHHCTTCSS
T ss_pred HHHHHHHHHhCCCCCC
Confidence 6889999999999998
|
| >2l2e_A Calcium-binding protein NCS-1; NCS1P, myristoylated, metal binding protein; HET: MYR; NMR {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=99.53 E-value=1.1e-13 Score=121.86 Aligned_cols=138 Identities=17% Similarity=0.223 Sum_probs=113.7
Q ss_pred CCCCCccHHHHHHHHHhhCCCCCHHHHHHHHHHhhcc-c----hHHHHHhcCC-----hHHHHHHHHHhhhhcCCCCCCc
Q 042823 338 DKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNS-S----TLESLCENLP-----TKEKQKLMEKFREMDTDNSDTL 407 (477)
Q Consensus 338 ~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~-~----~~~~~~~~~~-----~~~~~~l~~~F~~~D~~~~G~I 407 (477)
+.+|.++.+++..+.+.++ ++..++..++..+|.+ + ++.++...+. ......+..+|+.+|.|++|.|
T Consensus 3 ~~~~~l~~~el~~~~~~~~--~~~~el~~~f~~~D~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~G~i 80 (190)
T 2l2e_A 3 KSQSKLSQDQLQDLVRSTR--FDKKELQQWYKGFFKDCPSGHLNKSEFQKIYKQFFPFGDPSAFAEYVFNVFDADKNGYI 80 (190)
T ss_dssp CSSCCSCHHHHHHHHHHHC--SCSHHHHHHHHHHHHHSCCCEECHHHHHHHHHHHCCCSCHHHHHHHHHHHHCSSSTTCE
T ss_pred cccccCCHHHHHHHHHhcC--CCHHHHHHHHHHHHHhCCCCcCCHHHHHHHHHHhCCCCCccHHHHHHHHHhcCCCCCeE
Confidence 5678999999999888864 5888999999988744 2 2444433221 1234578899999999999999
Q ss_pred CHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhhh------------CCCcHHHHHHHHHHhccCC
Q 042823 408 TLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIY------------KLETPELLEKAFQYLDKNS 475 (477)
Q Consensus 408 ~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~~------------~~~~~~~l~~aF~~~D~d~ 475 (477)
+.+||..++..++...+++++..+++.+|.+++|.|+++||..++.... ...+.+++..+|+.+|+|+
T Consensus 81 ~~~ef~~~~~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~e~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~ 160 (190)
T 2l2e_A 81 DFKEFICALSVTSRGELNDKLIWAFQLYDLDNNGLISYDEMLRIVDAIYKMVGSMVKLPEDEDTPEKRVNKIFNMMDKNK 160 (190)
T ss_dssp EHHHHHHHHTTSSCSCSHHHHHHHHHHHCTTSCSCBCHHHHHHHHHHHHHHHHHHSCCCSSCCCTHHHHHHHHHHHTCCS
T ss_pred eHHHHHHHHHHHcCCCHHHHHHHHHhHccCCCCCcCcHHHHHHHHHHHHHHhccccCcccccccHHHHHHHHHHHhCCCC
Confidence 9999999999999999999999999999999999999999999987631 1345678999999999999
Q ss_pred CC
Q 042823 476 DQ 477 (477)
Q Consensus 476 ~G 477 (477)
||
T Consensus 161 dG 162 (190)
T 2l2e_A 161 DG 162 (190)
T ss_dssp SC
T ss_pred CC
Confidence 98
|
| >2aao_A CDPK, calcium-dependent protein kinase, isoform AK1; calmodulin-like domain, EF calcium binding protein, transferase; 2.00A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=99.52 E-value=3e-14 Score=122.52 Aligned_cols=101 Identities=39% Similarity=0.615 Sum_probs=89.7
Q ss_pred HHHHHhcCChHHHHHHHHHhhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhhh
Q 042823 377 LESLCENLPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIY 456 (477)
Q Consensus 377 ~~~~~~~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~~ 456 (477)
+..+...++.+++..++.+|..+|.|++|.|+.+||..+++.+|..+++.++..+++.+|.+++|.|+|+||+.++....
T Consensus 14 ~~~~~~~l~~~~~~~l~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~ 93 (166)
T 2aao_A 14 LRVIAESLSEEEIAGLKEMFNMIDADKSGQITFEELKAGLKRVGANLKESEILDLMQAADVDNSGTIDYKEFIAATLHLN 93 (166)
T ss_dssp HHHHHHHSCHHHHHHHHHHHHHHCTTCCSSBCHHHHHHHGGGGTCCCCHHHHHHHHHHHCTTCCSSBCHHHHHHHHTTCH
T ss_pred HHHHHHhCCHHHHHHHHHHHHHhCCCCCCeEeHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHh
Confidence 34455668888899999999999999999999999999999999999999999999999999999999999999886543
Q ss_pred CCCcHHHHHHHHHHhccCCCC
Q 042823 457 KLETPELLEKAFQYLDKNSDQ 477 (477)
Q Consensus 457 ~~~~~~~l~~aF~~~D~d~~G 477 (477)
.....+.+..+|+.+|+|++|
T Consensus 94 ~~~~~~~~~~~F~~~D~d~~G 114 (166)
T 2aao_A 94 KIEREDHLFAAFTYFDKDGSG 114 (166)
T ss_dssp HHHTTHHHHHHHHHHCTTCSS
T ss_pred hcccHHHHHHHHHHhCCCCCC
Confidence 333446899999999999998
|
| >3fs7_A Parvalbumin, thymic; calcium-binding protein, EF-hand, acetylation, calcium, metal binding protein; 1.95A {Gallus gallus} SCOP: a.39.1.4 PDB: 2kqy_A | Back alignment and structure |
|---|
Probab=99.52 E-value=2.7e-14 Score=113.66 Aligned_cols=96 Identities=22% Similarity=0.400 Sum_probs=80.9
Q ss_pred HHHHHHhhhcCCCCCCCccHHHHHHHHHhhCCCCCHHHHHHHHHHhhccchHHHHHhcCChHHHHHHHHHhhhhcCCCCC
Q 042823 326 QALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNSSTLESLCENLPTKEKQKLMEKFREMDTDNSD 405 (477)
Q Consensus 326 ~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~F~~~D~~~~G 405 (477)
.++.++|..+| ++|.|+++||..++... ....++++.+|+.||+|++|
T Consensus 10 ~ei~~~~~~~D--~~g~i~~~eF~~~~~~~------------------------------~~~~~~l~~~F~~~D~d~~G 57 (109)
T 3fs7_A 10 KDIESALSSCQ--AADSFNYKSFFSTVGLS------------------------------SKTPDQIKKVFGILDQDKSG 57 (109)
T ss_dssp HHHHHHHHHTC--STTCCCHHHHHHHHTCT------------------------------TCCHHHHHHHHHHHSTTCSS
T ss_pred HHHHHHHHhcC--CCCcCcHHHHHHHHhcC------------------------------CCcHHHHHHHHHHHCCCCCC
Confidence 45666666666 68888888887654321 12346789999999999999
Q ss_pred CcCHHHHHHHHHHc---CCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHH
Q 042823 406 TLTLSELKAGLAKL---GSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMT 453 (477)
Q Consensus 406 ~I~~~el~~~l~~~---g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~ 453 (477)
+|+.+||+.+++.+ |..+++++++.+++.+|.+++|.|+|+||+.++.
T Consensus 58 ~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~~~D~~~dg~i~~~EF~~~~~ 108 (109)
T 3fs7_A 58 FIEEEELQLFLKNFSSSARVLTSAETKAFLAAGDTDGDGKIGVEEFQSLVK 108 (109)
T ss_dssp SBCHHHHHTTGGGTCTTSCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHT
T ss_pred eEeHHHHHHHHHHHhcccccCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHh
Confidence 99999999999999 8999999999999999999999999999999874
|
| >2kn2_A Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco MKP1, metal binding Pro; NMR {Glycine max} | Back alignment and structure |
|---|
Probab=99.51 E-value=7.6e-14 Score=107.33 Aligned_cols=86 Identities=29% Similarity=0.508 Sum_probs=77.0
Q ss_pred CChHHHHHHHHHhhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhhhCCC---c
Q 042823 384 LPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIYKLE---T 460 (477)
Q Consensus 384 ~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~~---~ 460 (477)
...+..++++.+|+.||.|++|+|+.+||+.+|+.+|..+++++++.+++.+|.+++|.|+|+||+.++....... .
T Consensus 3 ~~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~d~~~dg~i~~~eF~~~~~~~~~~~~~~~ 82 (92)
T 2kn2_A 3 MDTDAEEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEFVKMMMTVRGGGGGNG 82 (92)
T ss_dssp CCCHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCSSCCSSEEHHHHHHHHHHHTTTCCCHH
T ss_pred CCccHHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHhccCCCCCch
Confidence 3456678999999999999999999999999999999999999999999999999999999999999998765532 3
Q ss_pred HHHHHHHHH
Q 042823 461 PELLEKAFQ 469 (477)
Q Consensus 461 ~~~l~~aF~ 469 (477)
.++++.||+
T Consensus 83 ~~~l~~aF~ 91 (92)
T 2kn2_A 83 WSRLRRKFS 91 (92)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHhc
Confidence 478999995
|
| >1pva_A Parvalbumin; calcium binding; 1.65A {Esox lucius} SCOP: a.39.1.4 PDB: 2pas_A 3pat_A | Back alignment and structure |
|---|
Probab=99.51 E-value=2.9e-14 Score=113.69 Aligned_cols=96 Identities=25% Similarity=0.421 Sum_probs=78.5
Q ss_pred HHHHHhhhcCCCCCCCccHHHHHHHHHhhCCCCCHHHHHHHHHHhhccchHHHHHhcCChHHHHHHHHHhhhhcCCCCCC
Q 042823 327 ALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNSSTLESLCENLPTKEKQKLMEKFREMDTDNSDT 406 (477)
Q Consensus 327 ~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~F~~~D~~~~G~ 406 (477)
.+..+|..+| ++|.|+++|+...+. +.....+.++.+|+.||+|++|+
T Consensus 11 e~~~~~~~~d--~~g~i~~~ef~~~~~------------------------------~~~~~~~~l~~~F~~~D~d~~G~ 58 (110)
T 1pva_A 11 DIKKALDAVK--AEGSFNHKKFFALVG------------------------------LKAMSANDVKKVFKAIDADASGF 58 (110)
T ss_dssp HHHHHHHHTC--STTCCCHHHHHHHHT------------------------------CTTSCHHHHHHHHHHHCTTCSSS
T ss_pred HHHHHHHhcC--CCCcCcHHHHHHHHc------------------------------cCcchHHHHHHHHHHhCCCCCCc
Confidence 4555555555 667777777765442 11233568899999999999999
Q ss_pred cCHHHHHHHHHHc---CCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHh
Q 042823 407 LTLSELKAGLAKL---GSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTD 454 (477)
Q Consensus 407 I~~~el~~~l~~~---g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~ 454 (477)
|+.+||+.+++.+ |..+++++++.+++.+|.+++|.|+|+||+.++..
T Consensus 59 I~~~el~~~l~~~~~~g~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~ 109 (110)
T 1pva_A 59 IEEEELKFVLKSFAADGRDLTDAETKAFLKAADKDGDGKIGIDEFETLVHE 109 (110)
T ss_dssp BCHHHHHTGGGGTCTTCCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHC
T ss_pred CcHHHHHHHHHHHhhcCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHh
Confidence 9999999999998 88899999999999999999999999999998863
|
| >1wdc_C Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Z 1kqm_C* 1kwo_C* 1l2o_C* 1qvi_Z* 1s5g_Z* 1sr6_C 1b7t_Z 3jvt_C 3jtd_C 1kk8_C* 2ec6_C 1dfk_Z 1dfl_Z* 2w4t_Z 2w4v_Z 2w4w_Z 2otg_C* 2os8_C* 3pn7_C ... | Back alignment and structure |
|---|
Probab=99.51 E-value=2e-14 Score=122.28 Aligned_cols=94 Identities=17% Similarity=0.170 Sum_probs=85.3
Q ss_pred cCChHHHHHHHHHhhhhcC--CCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhhhC--C
Q 042823 383 NLPTKEKQKLMEKFREMDT--DNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIYK--L 458 (477)
Q Consensus 383 ~~~~~~~~~l~~~F~~~D~--~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~~~--~ 458 (477)
.++.+++.+++++|..+|. |++|.|+.+||+.+|+.+|..++..++..+ +.+|.+++|.|+|+||+.++..... .
T Consensus 2 ~ls~~~~~~l~~~F~~~D~~~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l-~~~D~~~~g~i~~~eF~~~~~~~~~~~~ 80 (156)
T 1wdc_C 2 KLSQDEIDDLKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRNEDVFAV-GGTHKMGEKSLPFEEFLPAYEGLMDCEQ 80 (156)
T ss_dssp -CCHHHHHHHHHHHHHHHHHTCSSSCEEGGGHHHHHHHTTCCCCHHHHHHT-TCCSSTTSCEECHHHHHHHHHHHTTSCC
T ss_pred CCCHHHHHHHHHHHHHHccCCCCCCCCcHHHHHHHHHHcCCCCCHHHHHHH-HhhCCCCCCeeeHHHHHHHHHHHhhccC
Confidence 3677888999999999999 999999999999999999999999999999 9999999999999999999987654 4
Q ss_pred CcHHHHHHHHHHhccCCCC
Q 042823 459 ETPELLEKAFQYLDKNSDQ 477 (477)
Q Consensus 459 ~~~~~l~~aF~~~D~d~~G 477 (477)
...+.++.+|+.||+|++|
T Consensus 81 ~~~~~l~~~F~~~D~d~~G 99 (156)
T 1wdc_C 81 GTFADYMEAFKTFDREGQG 99 (156)
T ss_dssp CCHHHHHHHHHTTCSSSSS
T ss_pred ChHHHHHHHHHHhCCCCCC
Confidence 5668899999999999998
|
| >1rwy_A Parvalbumin alpha; EF-hand, calcium-binding, calcium-binding protein; HET: PG4; 1.05A {Rattus norvegicus} SCOP: a.39.1.4 PDB: 1rtp_1* 2jww_A 3f45_A 1s3p_A 1xvj_A 1rjv_A 1rk9_A 1g33_A | Back alignment and structure |
|---|
Probab=99.51 E-value=9.3e-14 Score=110.54 Aligned_cols=97 Identities=23% Similarity=0.333 Sum_probs=81.8
Q ss_pred HHHHHHhhhcCCCCCCCccHHHHHHHHHhhCCCCCHHHHHHHHHHhhccchHHHHHhcCChHHHHHHHHHhhhhcCCCCC
Q 042823 326 QALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNSSTLESLCENLPTKEKQKLMEKFREMDTDNSD 405 (477)
Q Consensus 326 ~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~F~~~D~~~~G 405 (477)
..+..+|..+| ++|.|+++|+...+... ....+.++.+|+.||+|++|
T Consensus 9 ~e~~~~~~~~d--~~g~i~~~eF~~~~~~~------------------------------~~~~~~l~~~F~~~D~d~~G 56 (109)
T 1rwy_A 9 EDIKKAIGAFT--AADSFDHKKFFQMVGLK------------------------------KKSADDVKKVFHILDKDKSG 56 (109)
T ss_dssp HHHHHHHHTTC--STTCCCHHHHHHHHTGG------------------------------GSCHHHHHHHHHHHSTTCSS
T ss_pred HHHHHHHHHcC--CCCcEeHHHHHHHHhcC------------------------------cchHHHHHHHHHHHCCCCCC
Confidence 34566677777 78888888887654211 12346889999999999999
Q ss_pred CcCHHHHHHHHHHc---CCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHh
Q 042823 406 TLTLSELKAGLAKL---GSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTD 454 (477)
Q Consensus 406 ~I~~~el~~~l~~~---g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~ 454 (477)
+|+.+||+.+++.+ |..+++++++.+++.+|.+++|.|+|+||+.++..
T Consensus 57 ~I~~~el~~~l~~~~~~g~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~ 108 (109)
T 1rwy_A 57 FIEEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGDGKIGVEEFSTLVAE 108 (109)
T ss_dssp EECHHHHHTHHHHHCTTCCCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHT
T ss_pred eEcHHHHHHHHHHHhccCCCCCHHHHHHHHHHHCCCCCCcCCHHHHHHHHHc
Confidence 99999999999999 88999999999999999999999999999998863
|
| >2opo_A Polcalcin CHE A 3; calcium-binding protein, dimer, domain-swapping, EF-hand; 1.75A {Chenopodium album} SCOP: a.39.1.10 PDB: 1h4b_A | Back alignment and structure |
|---|
Probab=99.50 E-value=7.7e-14 Score=105.82 Aligned_cols=84 Identities=25% Similarity=0.339 Sum_probs=73.5
Q ss_pred hcCChHHHHHHHHHhhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhhhCCCcH
Q 042823 382 ENLPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIYKLETP 461 (477)
Q Consensus 382 ~~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~ 461 (477)
..+++++.++++.+|+.+|.|++|+|+.+||+.+++.+| .+++++++.+++.+|.+++|.|+|+||+.++.... ...
T Consensus 3 ~~~~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g-~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~~~--~~~ 79 (86)
T 2opo_A 3 AEDTPQDIADRERIFKRFDTNGDGKISSSELGDALKTLG-SVTPDEVRRMMAEIDTDGDGFISFDEFTDFARANR--GLV 79 (86)
T ss_dssp ---CHHHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHTTT-TCCHHHHHHHHHHHCTTCSSEECHHHHHHHHHHCT--TTH
T ss_pred ccCCHhhHHHHHHHHHHHCCCCCCCcCHHHHHHHHHHcC-CCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHCc--cHH
Confidence 456778889999999999999999999999999999999 99999999999999999999999999999997653 234
Q ss_pred HHHHHHH
Q 042823 462 ELLEKAF 468 (477)
Q Consensus 462 ~~l~~aF 468 (477)
+++.+||
T Consensus 80 ~~~~~aF 86 (86)
T 2opo_A 80 KDVSKIF 86 (86)
T ss_dssp HHHHHHC
T ss_pred HHHHHhC
Confidence 5677776
|
| >2mys_C Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1m8q_C* 1mvw_C* 1o18_F* 1o19_C* 1o1a_C* 1o1b_C* 1o1c_C* 1o1d_C* 1o1e_C* 1o1f_C* 1o1g_C* | Back alignment and structure |
|---|
Probab=99.50 E-value=1.1e-13 Score=116.40 Aligned_cols=93 Identities=18% Similarity=0.273 Sum_probs=84.5
Q ss_pred CChHHHHHHHHHhhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHh---cCCCCCcccHHHHHHHHHhh--hC-
Q 042823 384 LPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAG---DIDGNGNIDSIEFVNLMTDI--YK- 457 (477)
Q Consensus 384 ~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~---d~~~~g~i~~~eF~~~~~~~--~~- 457 (477)
++++++.+++.+|..+|.|++|.|+.+||..+|+.+|..+++.++..+++.+ |.++ |.|+|+||+.++... ..
T Consensus 2 l~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~l~~~~~~~d~~~-g~i~~~eF~~~~~~~~~~~~ 80 (149)
T 2mys_C 2 FSKAAADDFKEAFLLFDRTGDAKITASQVGDIARALGQNPTNAEINKILGNPSKEEMNA-AAITFEEFLPMLQAAANNKD 80 (149)
T ss_pred CCHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhhhccccC-CcCcHHHHHHHHHHHhccCC
Confidence 5667888999999999999999999999999999999999999999999999 9999 999999999998765 22
Q ss_pred CCcHHHHHHHHHHhccCCCC
Q 042823 458 LETPELLEKAFQYLDKNSDQ 477 (477)
Q Consensus 458 ~~~~~~l~~aF~~~D~d~~G 477 (477)
....+.+..+|+.||+|++|
T Consensus 81 ~~~~~~~~~~F~~~D~d~~G 100 (149)
T 2mys_C 81 QGTFEDFVEGLRVFDKEGNG 100 (149)
T ss_pred cchHHHHHHHHHHhCCCCCc
Confidence 34567899999999999998
|
| >1s6i_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5 | Back alignment and structure |
|---|
Probab=99.50 E-value=8.5e-15 Score=128.93 Aligned_cols=95 Identities=45% Similarity=0.654 Sum_probs=85.2
Q ss_pred cCChHHHHHHHHHhhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhhhCCCcHH
Q 042823 383 NLPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIYKLETPE 462 (477)
Q Consensus 383 ~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~ 462 (477)
.++.+++++++++|..+|.|++|.|+.+||..+|+.+|..+++.++..+++.+|.+++|.|+|+||+.++.........+
T Consensus 3 ~ls~~~~~~l~~~F~~~D~d~dG~I~~~E~~~~l~~~g~~~~~~~~~~l~~~~D~d~dG~I~~~EF~~~~~~~~~~~~~~ 82 (188)
T 1s6i_A 3 RLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTIDYGEFIAATVHLNKLEREE 82 (188)
T ss_dssp SSSCTTTCSHHHHHHTTSSSSSSCEEHHHHHHHHTTTTCCCCHHHHHHHHHHTCTTCSSEECHHHHHHHHTTSSSSCCCC
T ss_pred CCCHHHHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHcCCCCCCeEeHHHHHHHHHHHhccCHHH
Confidence 45667778899999999999999999999999999999999999999999999999999999999999887554444456
Q ss_pred HHHHHHHHhccCCCC
Q 042823 463 LLEKAFQYLDKNSDQ 477 (477)
Q Consensus 463 ~l~~aF~~~D~d~~G 477 (477)
.+..+|+.||+|++|
T Consensus 83 ~l~~~F~~~D~d~dG 97 (188)
T 1s6i_A 83 NLVSAFSYFDKDGSG 97 (188)
T ss_dssp STHHHHHHTTTTCSS
T ss_pred HHHHHHHHHCCCCCC
Confidence 799999999999998
|
| >1top_A Troponin C; contractIle system protein; 1.78A {Gallus gallus} SCOP: a.39.1.5 PDB: 1ncy_A 1ncz_A 1ncx_A 1ytz_C* 1yv0_C 1tnw_A 1tnx_A 5tnc_A 2w49_0 2w4u_0 4tnc_A 1a2x_A 1tcf_A 1tn4_A 2tn4_A 1aj4_A 1jc2_A 1fi5_A 1sbj_A 1scv_A ... | Back alignment and structure |
|---|
Probab=99.49 E-value=5.9e-14 Score=120.05 Aligned_cols=98 Identities=28% Similarity=0.386 Sum_probs=87.3
Q ss_pred HHhcCChHHHHHHHHHhhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhhhCC-
Q 042823 380 LCENLPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIYKL- 458 (477)
Q Consensus 380 ~~~~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~- 458 (477)
+...++.+++.+++++|..+|.|++|.|+.+||..+++.+|..++++++..+++.+|.+++|.|+|+||+.++......
T Consensus 10 ~~~~ls~~~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~ 89 (162)
T 1top_A 10 ARAFLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQMKED 89 (162)
T ss_dssp HHHHSCHHHHHHHHHHHHTTTCSCSSEEEGGGHHHHHHHTTCCCCHHHHHHHHHHHCTTSCCEEEHHHHHHHHHHHHHHH
T ss_pred hhhhcCHHHHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHHcCCCCCcEeHHHHHHHHHHHhccc
Confidence 4456788899999999999999999999999999999999999999999999999999999999999999988754321
Q ss_pred C---cHHHHHHHHHHhccCCCC
Q 042823 459 E---TPELLEKAFQYLDKNSDQ 477 (477)
Q Consensus 459 ~---~~~~l~~aF~~~D~d~~G 477 (477)
. ..+.++.+|+.||+|++|
T Consensus 90 ~~~~~~~~~~~~F~~~D~d~~G 111 (162)
T 1top_A 90 AKGKSEEELANCFRIFDKNADG 111 (162)
T ss_dssp HHHHHHHHHHHHHHHHCTTCSS
T ss_pred cccccHHHHHHHHHHhCCCCCC
Confidence 1 356799999999999998
|
| >1m45_A MLC1P, myosin light chain; protein-peptide complex, myosin light chain, cell cycle protein; 1.65A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 1m46_A 1n2d_A 2fcd_A 2fce_A | Back alignment and structure |
|---|
Probab=99.49 E-value=9e-15 Score=123.26 Aligned_cols=88 Identities=18% Similarity=0.204 Sum_probs=78.1
Q ss_pred HHHHHHhhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHh-cCCCCCcccHHHHHHHHHhh------hCCCcHH
Q 042823 390 QKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAG-DIDGNGNIDSIEFVNLMTDI------YKLETPE 462 (477)
Q Consensus 390 ~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~-d~~~~g~i~~~eF~~~~~~~------~~~~~~~ 462 (477)
++++++|..+|.|++|.|+.+||..+|+.+|..+++.++..+++.+ |.+++|.|+|+||+.++... ......+
T Consensus 4 ~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~~D~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~~ 83 (148)
T 1m45_A 4 RANKDIFTLFDKKGQGAIAKDSLGDYLRAIGYNPTNQLVQDIINADSSLRDASSLTLDQITGLIEVNEKELDATTKAKTE 83 (148)
T ss_dssp CCCTTCHHHHCTTCCSEEEGGGHHHHHHHTTCCCCHHHHHHHHHC--CC--CCEEEHHHHHHHHHHTHHHHHGGGCCCTH
T ss_pred HHHHHHHHHHCCCCCCCCCHHHHHHHHHHhCCCCCHHHHHHHHHHhhCCCCCCeEcHHHHHHHHHHHHhhccccccccHH
Confidence 4577899999999999999999999999999999999999999999 99999999999999999876 3455667
Q ss_pred HHHHHHHHhccCCCC
Q 042823 463 LLEKAFQYLDKNSDQ 477 (477)
Q Consensus 463 ~l~~aF~~~D~d~~G 477 (477)
.++.+|+.||+|++|
T Consensus 84 ~~~~~F~~~D~d~~G 98 (148)
T 1m45_A 84 DFVKAFQVFDKESTG 98 (148)
T ss_dssp HHHHHHHTTCSSSSS
T ss_pred HHHHHHHHhCCCCCC
Confidence 899999999999998
|
| >1nya_A Calerythrin; EF-hand, metal binding protein; NMR {Saccharopolyspora erythraea} SCOP: a.39.1.5 | Back alignment and structure |
|---|
Probab=99.48 E-value=1.3e-13 Score=119.65 Aligned_cols=93 Identities=15% Similarity=0.293 Sum_probs=82.9
Q ss_pred ChHHHHHHHHHhhhhcCCCCCCcCHHHHHH----HHHHcCCCCCHHHHH-----------HHHHHhcCCCCCcccHHHHH
Q 042823 385 PTKEKQKLMEKFREMDTDNSDTLTLSELKA----GLAKLGSALEESEVN-----------QYMEAGDIDGNGNIDSIEFV 449 (477)
Q Consensus 385 ~~~~~~~l~~~F~~~D~~~~G~I~~~el~~----~l~~~g~~~~~~~i~-----------~~~~~~d~~~~g~i~~~eF~ 449 (477)
+++++++++.+|+.+|.|++|.|+.+||.. +++.+|..++..++. .+++.+|.+++|.|+|+||+
T Consensus 2 s~~~~~~l~~~F~~~D~d~~G~i~~~el~~~~~~~l~~~g~~~~~~~~~~l~~~~~~~~~~lf~~~D~d~dg~i~~~Ef~ 81 (176)
T 1nya_A 2 TAIASDRLKKRFDRWDFDGNGALERADFEKEAQHIAEAFGKDAGAAEVQTLKNAFGGLFDYLAKEAGVGSDGSLTEEQFI 81 (176)
T ss_dssp CSHHHHHHHHHHHHCCSSCCSSBCSHHHHHHHHHHHHHTSSCSSSHHHHHHHHHHHHHHHHHHHHHTSCTTCCBCHHHHH
T ss_pred cHHHHHHHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHcCCCCCcHHHHHHHHHHHHHHHHHHHHhCCCCCCeEcHHHHH
Confidence 567788999999999999999999999999 788899999998887 78899999999999999999
Q ss_pred HHHHhhhCCCc--------HHHHHHHHHHhccCCCC
Q 042823 450 NLMTDIYKLET--------PELLEKAFQYLDKNSDQ 477 (477)
Q Consensus 450 ~~~~~~~~~~~--------~~~l~~aF~~~D~d~~G 477 (477)
.++........ .+.++.+|+.||+|++|
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G 117 (176)
T 1nya_A 82 RVTENLIFEQGEASFNRVLGPVVKGIVGMCDKNADG 117 (176)
T ss_dssp HHHHHHHSSSCHHHHHHHHHHHHHHHHHHTCSSCCS
T ss_pred HHHHHHhcCCchhhHHHHHHHHHHHHHHHhcCCCCC
Confidence 99987655333 35699999999999998
|
| >3j04_B Myosin regulatory light chain 2, smooth muscle MA isoform; phosphorylation, 2D crystalline arrays, myosin regulation, M light chains, structural protein; 20.00A {Gallus gallus} | Back alignment and structure |
|---|
Probab=99.48 E-value=7.5e-14 Score=116.81 Aligned_cols=90 Identities=17% Similarity=0.348 Sum_probs=81.0
Q ss_pred CChHHHHHHHHHhhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhhhC-CCcHH
Q 042823 384 LPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIYK-LETPE 462 (477)
Q Consensus 384 ~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~~~-~~~~~ 462 (477)
++.+++++++++|+.+|.|++|.|+.+||..+|+.+|..++..++..++.. ++|.|+|+||+.++..... ....+
T Consensus 1 ls~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~----~~g~i~~~eF~~~~~~~~~~~~~~~ 76 (143)
T 3j04_B 1 FDQSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLASMGKNPTDEYLEGMMSE----APGPINFTMFLTMFGEKLNGTDPED 76 (143)
T ss_dssp CCHHHHHHHHHHHTTTCSSCTTCCCHHHHHHHHHHTSCCCCHHHHHTTTTT----SSSCCCHHHHHHHHHHTTTSSCCHH
T ss_pred CCHHHHHHHHHHHHHhCCCCCCCcCHHHHHHHHHHhCCCCCHHHHHHHHHh----CCCCcCHHHHHHHHHHHhccCCcHH
Confidence 356788999999999999999999999999999999999999999988876 7899999999999986544 45678
Q ss_pred HHHHHHHHhccCCCC
Q 042823 463 LLEKAFQYLDKNSDQ 477 (477)
Q Consensus 463 ~l~~aF~~~D~d~~G 477 (477)
.+..+|+.||+|++|
T Consensus 77 ~l~~~F~~~D~d~~G 91 (143)
T 3j04_B 77 VIRNAFACFDEEASG 91 (143)
T ss_dssp HHHHHHTTSCSSSCC
T ss_pred HHHHHHHHHCCCCCC
Confidence 899999999999998
|
| >3sjs_A URE3-BP sequence specific DNA binding protein; EF-hand, structural genomics, seattle S genomics center for infectious disease, ssgcid; 1.90A {Entamoeba histolytica} PDB: 3sia_A 3sib_A | Back alignment and structure |
|---|
Probab=99.48 E-value=7e-14 Score=126.28 Aligned_cols=93 Identities=26% Similarity=0.321 Sum_probs=86.2
Q ss_pred HHHhcCChHHHHHHHHHhhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhhhCC
Q 042823 379 SLCENLPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIYKL 458 (477)
Q Consensus 379 ~~~~~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~ 458 (477)
.+...++.++.++++++|+.+|.|++|.|+.+||..+|+.+|..+++++++.+++.+|.+++|.|+|+||+.++...
T Consensus 40 ~~~~~l~~~e~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~l~~~~D~d~dg~I~~~EF~~~~~~~--- 116 (220)
T 3sjs_A 40 PLLNTIPLDQYTRIYQWFMGVDRDRSGTLEINELMMGQFPGGIRLSPQTALRMMRIFDTDFNGHISFYEFMAMYKFM--- 116 (220)
T ss_dssp GGGGGCCHHHHHHHHHHHHHHCTTCCSSBCHHHHHHCCBGGGBCCCHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHH---
T ss_pred HHHhcCCHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHH---
Confidence 34567888999999999999999999999999999999999999999999999999999999999999999998763
Q ss_pred CcHHHHHHHHHHhccCCCC
Q 042823 459 ETPELLEKAFQYLDKNSDQ 477 (477)
Q Consensus 459 ~~~~~l~~aF~~~D~d~~G 477 (477)
++++.+|+.||+|++|
T Consensus 117 ---~~l~~~F~~~D~d~~G 132 (220)
T 3sjs_A 117 ---ELAYNLFVMNARARSG 132 (220)
T ss_dssp ---HHHHHHHHHHCCSSTT
T ss_pred ---HHHHHHHHHHCCCCCC
Confidence 5799999999999998
|
| >1rro_A RAT oncomodulin; calcium-binding protein; 1.30A {Rattus rattus} SCOP: a.39.1.4 PDB: 1omd_A 2nln_A 1ttx_A | Back alignment and structure |
|---|
Probab=99.48 E-value=5.9e-14 Score=111.49 Aligned_cols=96 Identities=27% Similarity=0.352 Sum_probs=79.1
Q ss_pred HHHHHHhhhcCCCCCCCccHHHHHHHHHhhCCCCCHHHHHHHHHHhhccchHHHHHhcCChHHHHHHHHHhhhhcCCCCC
Q 042823 326 QALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNSSTLESLCENLPTKEKQKLMEKFREMDTDNSD 405 (477)
Q Consensus 326 ~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~F~~~D~~~~G 405 (477)
..+..+|..+| ++|.|+++|+...+.. .....+.++.+|+.||.|++|
T Consensus 9 ~e~~~~~~~~d--~~g~i~~~eF~~~~~~------------------------------~~~~~~~l~~~F~~~D~d~~G 56 (108)
T 1rro_A 9 EDIAAALQECQ--DPDTFEPQKFFQTSGL------------------------------SKMSASQVKDIFRFIDNDQSG 56 (108)
T ss_dssp HHHHHHHHHTC--STTCCCHHHHHHHHSG------------------------------GGSCHHHHHHHHHHHCTTCSS
T ss_pred HHHHHHHHHcc--CCCCcCHHHHHHHHhc------------------------------CcccHHHHHHHHHHhCCCCCC
Confidence 34555666666 7778888887655421 112346789999999999999
Q ss_pred CcCHHHHHHHHHHc---CCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHH
Q 042823 406 TLTLSELKAGLAKL---GSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMT 453 (477)
Q Consensus 406 ~I~~~el~~~l~~~---g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~ 453 (477)
+|+.+||+.+++.+ |..+++++++.+++.+|.+++|.|+|+||+.++.
T Consensus 57 ~I~~~el~~~l~~~~~~g~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~ 107 (108)
T 1rro_A 57 YLDGDELKYFLQKFQSDARELTESETKSLMDAADNDGDGKIGADEFQEMVH 107 (108)
T ss_dssp EECTHHHHTGGGGTCTTSCCCCHHHHHHHHHHHCCSSSSSEEHHHHHHHHT
T ss_pred cCCHHHHHHHHHHHhhccCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHc
Confidence 99999999999998 6889999999999999999999999999999874
|
| >1qxp_A MU-like calpain; M-calpain, MU-calpain, catalytic triad, Ca(2+) requirement, hydrolase chimera; 2.80A {Rattus norvegicus} SCOP: a.39.1.8 a.39.1.8 b.14.1.1 d.3.1.3 | Back alignment and structure |
|---|
Probab=99.47 E-value=5e-14 Score=153.11 Aligned_cols=145 Identities=17% Similarity=0.248 Sum_probs=107.5
Q ss_pred HHHHHHhhhcCCCCCCCccHHHHHHHHHhhCCCCCHHHHHHHHHHhhcc---chHHHHHhcCChH---------------
Q 042823 326 QALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNS---STLESLCENLPTK--------------- 387 (477)
Q Consensus 326 ~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~---~~~~~~~~~~~~~--------------- 387 (477)
..++.+|..+|.|++|.|+.+||..+++.+|..++..+++.++..+|+. .++++|+..+...
T Consensus 607 ~~l~~~F~~~D~d~~G~Is~~El~~~l~~~g~~l~~~~~~~l~~~~dd~dg~I~~~eF~~~~~~~~~l~~~F~~~D~d~~ 686 (900)
T 1qxp_A 607 RNYLTIFRKFDLDKSGSMSAYEMRMAIEAAGFKLPCQLHQVIVARFADDELIIDFDNFVRCLVRLEILFKIFKQLDPENT 686 (900)
T ss_dssp HHHHHHHGGGCTTCCSCCBHHHHHHHHHHTTEECCHHHHHHHHHHTSCSSSBCCHHHHHHHHHHHHHHHHHHHHSCSSCC
T ss_pred HHHHHHHHhhCCCCCCeECHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCeEcHHHHHHHHHHHHHHHHHHHhhCCCCC
Confidence 6788999999999999999999999999999999999999999998721 2456555433211
Q ss_pred ------------------------------------------HHHHHHHHhhhhcCCCCCCcCHHHHHHHHHHcC-----
Q 042823 388 ------------------------------------------EKQKLMEKFREMDTDNSDTLTLSELKAGLAKLG----- 420 (477)
Q Consensus 388 ------------------------------------------~~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g----- 420 (477)
..+.++.+|..+|.+ +|.|+.+||+.+|..+|
T Consensus 687 G~It~~~~efl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~~-~G~Is~~El~~~L~~~~~~~~~ 765 (900)
T 1qxp_A 687 GTIQLDLISWLSFSVLGKLAAAIEHHHHHHMHYSNIEANESEEERQFRKLFVQLAGD-DMEVSATELMNILNKVVTRHPD 765 (900)
T ss_dssp SCEEEEHHHHHHHTCC--------------CCCCCC--------------CCCCTTC-SSCBCHHHHTTTSCC----CCS
T ss_pred ceEEecHHHHHHHhhhccccccccccccccccccCCCCCChHHHHHHHHHHHHhcCC-CCccCHHHHHHHHHHhcccccc
Confidence 123344555555554 56668899999888776
Q ss_pred ---CCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhhhCCCcHHHHHHHHHHhccCCCC
Q 042823 421 ---SALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIYKLETPELLEKAFQYLDKNSDQ 477 (477)
Q Consensus 421 ---~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~l~~aF~~~D~d~~G 477 (477)
..++.++++.+++.+|.|+||.|+|+||+.++... ..++.+|+.||+|++|
T Consensus 766 ~~~~~~s~~~~~~l~~~~D~d~dG~Is~~EF~~l~~~~------~~l~~~F~~~D~d~dG 819 (900)
T 1qxp_A 766 LKTDGFGIDTCRSMVAVMDSDTTGKLGFEEFKYLWNNI------KKWQGIYKRFETDRSG 819 (900)
T ss_dssp CC--CCCHHHHHHHHHHHCCSSSSSBCSHHHHHHHHHH------HHHSSCC----CCSCC
T ss_pred cccCCCCHHHHHHHHHHHCCCCCCeECHHHHHHHHHHH------HHHHHHHHHhCCCCCC
Confidence 36788999999999999999999999999988654 3788899999999998
|
| >3mse_B Calcium-dependent protein kinase, putative; CDPKS, malaria, structural genomics consortium, SGC, transfe; 2.10A {Plasmodium falciparum} | Back alignment and structure |
|---|
Probab=99.46 E-value=2.8e-13 Score=118.28 Aligned_cols=96 Identities=26% Similarity=0.393 Sum_probs=82.0
Q ss_pred HHHhcCC--hHHHHHHHHHhhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhhh
Q 042823 379 SLCENLP--TKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIY 456 (477)
Q Consensus 379 ~~~~~~~--~~~~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~~ 456 (477)
.+...++ .+++++++++|+.+|.|++|.|+.+||..+|+.+|.. +.++..+++.+|.+++|.|+|+||+.++....
T Consensus 26 ~~~~~l~~~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~g~~--~~~~~~~~~~~D~d~~g~i~~~Ef~~~~~~~~ 103 (180)
T 3mse_B 26 IMAHELSVINNHIKYINELFYKLDTNHNGSLSHREIYTVLASVGIK--KWDINRILQALDINDRGNITYTEFMAGCYRWK 103 (180)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHTTCC--HHHHHHHHHHHCTTCCSEECHHHHHHHHSCCT
T ss_pred HHHHHccCCHHHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHcCCC--HHHHHHHHHHhCCCCCCcCcHHHHHHHHHhcc
Confidence 3344444 6778899999999999999999999999999999864 68899999999999999999999999887543
Q ss_pred CCCcHHHHHHHHHHhccCCCC
Q 042823 457 KLETPELLEKAFQYLDKNSDQ 477 (477)
Q Consensus 457 ~~~~~~~l~~aF~~~D~d~~G 477 (477)
. ..++++..+|+.||+|++|
T Consensus 104 ~-~~~~~~~~~F~~~D~d~~G 123 (180)
T 3mse_B 104 N-IESTFLKAAFNKIDKDEDG 123 (180)
T ss_dssp T-C--CHHHHHHHHHCTTCSS
T ss_pred c-CCHHHHHHHHHHHCCCCCC
Confidence 3 2346899999999999998
|
| >1wdc_B Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Y 1kqm_B* 1kwo_B* 1l2o_B* 1qvi_Y* 1s5g_Y* 1sr6_B 1b7t_Y 3jtd_B 3jvt_B 1scm_B 1kk8_B* 1dfk_Y 1dfl_Y* 2w4t_Y 2w4v_Y 2w4w_Y 2otg_B* 2os8_B* 3pn7_B ... | Back alignment and structure |
|---|
Probab=99.46 E-value=3.1e-13 Score=114.91 Aligned_cols=93 Identities=23% Similarity=0.447 Sum_probs=81.6
Q ss_pred HhcCChHHHHHHHHHhhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhhhC-CC
Q 042823 381 CENLPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIYK-LE 459 (477)
Q Consensus 381 ~~~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~~~-~~ 459 (477)
...++.+++.+++.+|+.+|.|++|.|+.+||..+|+.+|..+++.++..+++ +++|.|+|+||+.++..... ..
T Consensus 9 ~~~l~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~----~~~g~i~~~eF~~~~~~~~~~~~ 84 (156)
T 1wdc_B 9 LTKLPQKQIQEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLK----EAPGPLNFTMFLSIFSDKLSGTD 84 (156)
T ss_dssp ---CCHHHHHHHHHHHHHHCTTCSSSCCHHHHHHHHHHHSSCCCHHHHHHHHT----TSSSCCCHHHHHHHHHHHTCSCC
T ss_pred hccCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHH----hCCCcCcHHHHHHHHHHHhcCCC
Confidence 34577888999999999999999999999999999999999999999999885 47899999999999986543 45
Q ss_pred cHHHHHHHHHHhccCCCC
Q 042823 460 TPELLEKAFQYLDKNSDQ 477 (477)
Q Consensus 460 ~~~~l~~aF~~~D~d~~G 477 (477)
..+.++.+|+.||+|++|
T Consensus 85 ~~~~l~~~F~~~D~d~~G 102 (156)
T 1wdc_B 85 SEETIRNAFAMFDEQETK 102 (156)
T ss_dssp CHHHHHHHHHTTCTTCCS
T ss_pred hHHHHHHHHHHHCcCCCC
Confidence 678899999999999998
|
| >3e3r_A Calcyphosin, calcyphosine; human calcyphosine, EF-hand, phosphoprotein, calcium binding; 2.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.46 E-value=6.6e-14 Score=124.78 Aligned_cols=92 Identities=30% Similarity=0.473 Sum_probs=78.8
Q ss_pred hHHHHHHHHHhhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhhhCCCcHHHHH
Q 042823 386 TKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIYKLETPELLE 465 (477)
Q Consensus 386 ~~~~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~l~ 465 (477)
..++++++++|+.+|.|++|.|+.+||+.+|+.+|..+++++++.+++.+|.+++|.|+|+||+.++.........+.+.
T Consensus 33 ~~~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~ef~~~~~~~~~~~~~~~~~ 112 (204)
T 3e3r_A 33 ASGIQGLARFFRQLDRDGSRSLDADEFRQGLAKLGLVLDQAEAEGVCRKWDRNGSGTLDLEEFLRALRPPMSQAREAVIA 112 (204)
T ss_dssp -------CHHHHHHCTTCCSSBCHHHHHHHHHTTTCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHTSCCCCHHHHHHHH
T ss_pred chhHHHHHHHHHHHccCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhccCCCCcCcHHHHHHHHHhhcCchHHHHHH
Confidence 45667899999999999999999999999999999999999999999999999999999999999987544434557899
Q ss_pred HHHHHhccCCCC
Q 042823 466 KAFQYLDKNSDQ 477 (477)
Q Consensus 466 ~aF~~~D~d~~G 477 (477)
.+|+.||+|++|
T Consensus 113 ~~F~~~D~d~~G 124 (204)
T 3e3r_A 113 AAFAKLDRSGDG 124 (204)
T ss_dssp HHHHHHCTTCSS
T ss_pred HHHHHhCcCCCC
Confidence 999999999998
|
| >3nso_A Protein S100-A3; EF-hand, Ca2+, Zn2+ binding, metal binding protein; 1.45A {Homo sapiens} SCOP: a.39.1.2 PDB: 3nsi_A 1kso_A 3nsk_A 3nsl_A | Back alignment and structure |
|---|
Probab=99.46 E-value=1.3e-13 Score=106.96 Aligned_cols=68 Identities=22% Similarity=0.322 Sum_probs=62.3
Q ss_pred HHHHHHHHHhhhhc-CCCC-CCcCHHHHHHHHHH-----cCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHh
Q 042823 387 KEKQKLMEKFREMD-TDNS-DTLTLSELKAGLAK-----LGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTD 454 (477)
Q Consensus 387 ~~~~~l~~~F~~~D-~~~~-G~I~~~el~~~l~~-----~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~ 454 (477)
..+.+++++|+.|| +|++ |+|+.+||+.+|+. +|..+++++++++++.+|.|+||.|+|+||+.++..
T Consensus 7 ~~i~~l~~aF~~fd~~dg~~G~Is~~EL~~~l~~~l~~~lg~~~~~~ev~~~i~~~D~dgDG~Idf~EF~~~~~~ 81 (101)
T 3nso_A 7 QAVAAIVCTFQEYAGRCGDKYKLCQAELKELLQKELATWTPTEFRECDYNKFMSVLDTNKDCEVDFVEYVRSLAC 81 (101)
T ss_dssp HHHHHHHHHHHHHHTTSSCTTEECHHHHHHHHHHHTTTCCCCTTCHHHHHHHHHHHHHCCCSCEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhcCCCCCEECHHHHHHHHHHHhhhhcCCCCCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHH
Confidence 34678999999997 8987 99999999999986 578899999999999999999999999999999875
|
| >3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A* | Back alignment and structure |
|---|
Probab=99.45 E-value=5.1e-13 Score=124.15 Aligned_cols=142 Identities=16% Similarity=0.162 Sum_probs=112.3
Q ss_pred ccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEE
Q 042823 21 VMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVH 100 (477)
Q Consensus 21 ~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~ 100 (477)
....|++...+|.|+.+.||++.. .++.+++|+....... ....+.+|+.++..+..+..++++++++...+..|
T Consensus 12 ~l~~~~~~~~~~g~s~~~v~~~~~--~~~~~vlK~~~~~~~~---~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~ 86 (263)
T 3tm0_A 12 LIEKYRCVKDTEGMSPAKVYKLVG--ENENLYLKMTDSRYKG---TTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSN 86 (263)
T ss_dssp HHTTSEEEECCSCCSSSEEEEEEC--SSCEEEEEEECGGGTT---STTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEE
T ss_pred HhccceeEeeccCCCCCeEEEEEC--CCCcEEEEeCCcccCC---CHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceE
Confidence 345799999999999999999874 3688999988642111 12357889999999976788999999999999999
Q ss_pred EEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH--------------------------------------
Q 042823 101 VVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHS-------------------------------------- 142 (477)
Q Consensus 101 lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~-------------------------------------- 142 (477)
+|||+++|.+|.+.+ .+......++.++..+|..||+
T Consensus 87 lv~e~i~G~~l~~~~-----~~~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (263)
T 3tm0_A 87 LLMSEADGVLCSEEY-----EDEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEED 161 (263)
T ss_dssp EEEECCSSEEHHHHC-----CTTTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTT
T ss_pred EEEEecCCeehhhcc-----CCcccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhcccccccccccccc
Confidence 999999999987652 1223345788899999999998
Q ss_pred ---------------------cCCeeccCCCCceeeeecCCCCCEEEeecCCcc
Q 042823 143 ---------------------MGVMHRDLKPENFSFISRDDNALLKVTDFGSAL 175 (477)
Q Consensus 143 ---------------------~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~ 175 (477)
..++|||++|.||++ ++...+.|+||+.+.
T Consensus 162 ~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~---~~~~~~~lIDwe~a~ 212 (263)
T 3tm0_A 162 TPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFV---KDGKVSGFIDLGRSG 212 (263)
T ss_dssp CSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEE---ETTEEEEECCCTTCE
T ss_pred ccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEE---ECCcEEEEEEchhcc
Confidence 458999999999998 444556799999775
|
| >3khe_A Calmodulin-like domain protein kinase isoform 3; calcium dependent kinase, structural genomics, structural GE consortium, SGC, ATP-binding; 1.95A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=99.45 E-value=6.3e-14 Score=123.49 Aligned_cols=99 Identities=32% Similarity=0.444 Sum_probs=77.7
Q ss_pred HHHhcC-ChHHHHHHHHHhhhhcCCCCCCcCHHHHHHHHHHc-----------CCCCCHHHHHHHHHHhcCCCCCcccHH
Q 042823 379 SLCENL-PTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKL-----------GSALEESEVNQYMEAGDIDGNGNIDSI 446 (477)
Q Consensus 379 ~~~~~~-~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~-----------g~~~~~~~i~~~~~~~d~~~~g~i~~~ 446 (477)
.+...+ +.+++.+++.+|+.+|.|++|.|+.+||..+++.+ |..+++.++..+++.+|.+++|.|+|+
T Consensus 28 ~~~~~~~~~~~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~~g~i~~~ 107 (191)
T 3khe_A 28 FMGSKLTTLEETKELTQIFRQLDNNGDGQLDRKELIEGYRKLMQWKGDTVSDLDSSQIEAEVDHILQSVDFDRNGYIEYS 107 (191)
T ss_dssp HHHHHSSCTTTTHHHHHHHHHHCTTCSSEECHHHHHHHHHHHHC-----CCHHHHHHHHHHHHHHHHHTCTTCSSSEEHH
T ss_pred HHHHHHcCHHHHHHHHHHHHHHcCCCCCCCcHHHHHHHHHHHHhhcccccccccchhhHHHHHHHHHHhCCCCCCcCCHH
Confidence 344445 66777888888888888888888888888888876 666777888888888888888888888
Q ss_pred HHHHHHHhhhCCCcHHHHHHHHHHhccCCCC
Q 042823 447 EFVNLMTDIYKLETPELLEKAFQYLDKNSDQ 477 (477)
Q Consensus 447 eF~~~~~~~~~~~~~~~l~~aF~~~D~d~~G 477 (477)
||+.++.........+++..+|+.+|+|++|
T Consensus 108 ef~~~~~~~~~~~~~~~~~~~F~~~D~d~~G 138 (191)
T 3khe_A 108 EFVTVCMDKQLLLSRERLLAAFQQFDSDGSG 138 (191)
T ss_dssp HHHHHHSCHHHHCCHHHHHHHHHHHCTTCSS
T ss_pred HHHHHHHHhcccchHHHHHHHHHHHCCCCcC
Confidence 8888876554445567788888888888887
|
| >1fpw_A Yeast frequenin, calcium-binding protein NCS-1; EF-hand, metal binding protein; NMR {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2ju0_A | Back alignment and structure |
|---|
Probab=99.45 E-value=5.1e-13 Score=117.55 Aligned_cols=114 Identities=24% Similarity=0.258 Sum_probs=96.8
Q ss_pred HHHHHHhhhcCCCCCCCccHHHHHHHHHhhCCCCCHHHHHHHHHHhhccchHHHHHhcCChHHHHHHHHHhhhhcCCCCC
Q 042823 326 QALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNSSTLESLCENLPTKEKQKLMEKFREMDTDNSD 405 (477)
Q Consensus 326 ~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~F~~~D~~~~G 405 (477)
..+..+|..+|.+++|.|+.+||..++..++..++. ++++.+|+.+|.|++|
T Consensus 63 ~~~~~~f~~~D~d~~G~i~~~ef~~~~~~~~~~~~~----------------------------~~~~~~f~~~D~d~~G 114 (190)
T 1fpw_A 63 DFANHLFTVFDKDNNGFIHFEEFITVLSTTSRGTLE----------------------------EKLSWAFELYDLNHDG 114 (190)
T ss_dssp HHHHHHHHTCCSSCSSEECHHHHHHHHHHHSCCCST----------------------------HHHHHHHHHHCSSCSS
T ss_pred HHHHHHHHHHCCCCCCcEeHHHHHHHHHHHccCCcH----------------------------HHHHHHHHHhcCCCCC
Confidence 357889999999999999999999998887654332 4567899999999999
Q ss_pred CcCHHHHHHHHHH----cCC--------CCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhhhCCCcHHHHHHHHHHhcc
Q 042823 406 TLTLSELKAGLAK----LGS--------ALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIYKLETPELLEKAFQYLDK 473 (477)
Q Consensus 406 ~I~~~el~~~l~~----~g~--------~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~l~~aF~~~D~ 473 (477)
.|+.+||..++.. +|. ..+++++..+++.+|.|++|.|+++||+.++.... .+...|..||.
T Consensus 115 ~i~~~ef~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~~------~~~~~~~~~d~ 188 (190)
T 1fpw_A 115 YITFDEMLTIVASVYKMMGSMVTLNEDEATPEMRVKKIFKLMDKNEDGYITLDEFREGSKVDP------SIIGALNLYDG 188 (190)
T ss_dssp EEEHHHHHHHHHHHHTTSCSTTSSSCCCCCHHHHHHHHHHHHTTTCSSEEEHHHHHHHHHSST------THHHHHHHHHC
T ss_pred cCcHHHHHHHHHHHHHHhccccCcccccchHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHhCh------HHHHHHhhccc
Confidence 9999999999988 353 47788999999999999999999999999987532 57778888874
|
| >2ggz_A Guanylyl cyclase-activating protein 3; EF hand, guanylate cyclase activating protein, GCAP, GCAP3, GCAP-3, lyase activator; 3.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.44 E-value=1.1e-12 Score=117.56 Aligned_cols=104 Identities=22% Similarity=0.325 Sum_probs=89.1
Q ss_pred hhhHHHHHHhhhcCCCCCCCccHHHHHHHHHhhCCCCCHHHHHHHHHHhhccchHHHHHhcCChHHHHHHHHHhhhhcCC
Q 042823 323 EETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNSSTLESLCENLPTKEKQKLMEKFREMDTD 402 (477)
Q Consensus 323 ~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~F~~~D~~ 402 (477)
.....+..+|..+|.+++|.|+.+||..++..++...+ .++++.+|+.||.|
T Consensus 54 ~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~~~~~~----------------------------~~~l~~~F~~~D~d 105 (211)
T 2ggz_A 54 KANKHIDQVYNTFDTNKDGFVDFLEFIAAVNLIMQEKM----------------------------EQKLKWYFKLYDAD 105 (211)
T ss_dssp HHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHSCSSH----------------------------HHHHHHHHHHHCTT
T ss_pred chHHHHHHHHHHHcCCCCCeEeHHHHHHHHHHhccCch----------------------------HHHHHHHHHHhcCC
Confidence 34456889999999999999999999998887653221 24678899999999
Q ss_pred CCCCcCHHHHHHHHHHcC-----CCCCHH-HHHHHHHHhcCCCCCcccHHHHHHHHHh
Q 042823 403 NSDTLTLSELKAGLAKLG-----SALEES-EVNQYMEAGDIDGNGNIDSIEFVNLMTD 454 (477)
Q Consensus 403 ~~G~I~~~el~~~l~~~g-----~~~~~~-~i~~~~~~~d~~~~g~i~~~eF~~~~~~ 454 (477)
++|+|+.+||..++..++ ..++.+ .++.+++.+|.|+||.|+|+||+.++..
T Consensus 106 ~~G~I~~~E~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~ 163 (211)
T 2ggz_A 106 GNGSIDKNELLDMFMAVQALNGQQTLSPEEFINLVFHKIDINNDGELTLEEFINGMAK 163 (211)
T ss_dssp CSSSBCHHHHHHHHHHHTTSSCCCSCTHHHHHHHHHHHHCTTCSSSBCHHHHHHHHHT
T ss_pred CCCcCcHHHHHHHHHHHHhhcCCccccHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHh
Confidence 999999999999999986 566664 4899999999999999999999999874
|
| >1w7j_B Myosin light chain 1; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Homo sapiens} SCOP: a.39.1.5 PDB: 1w7i_B* 1oe9_B* 3j04_C 1br1_B* 1br4_B* 1i84_T* 3dtp_C 2w4a_C 2w4g_C 2w4h_C | Back alignment and structure |
|---|
Probab=99.44 E-value=2.1e-14 Score=121.37 Aligned_cols=94 Identities=18% Similarity=0.249 Sum_probs=76.5
Q ss_pred CChHHHHHHHHHhhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCC--CCCcccHHHHHHHHHhhhC---C
Q 042823 384 LPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDID--GNGNIDSIEFVNLMTDIYK---L 458 (477)
Q Consensus 384 ~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~--~~g~i~~~eF~~~~~~~~~---~ 458 (477)
++++++++++.+|..+|.|++|.|+.+||..+|+.+|..+++.++..+++.+|.+ ++|.|+|+||+.++..... .
T Consensus 4 ls~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~d~~~~~~g~i~~~eF~~~~~~~~~~~~~ 83 (151)
T 1w7j_B 4 FNKDQLEEFKEAFELFDRVGDGKILYSQCGDVMRALGQNPTNAEVLKVLGNPKSDELKSRRVDFETFLPMLQAVAKNRGQ 83 (151)
T ss_dssp -------CHHHHHHHHCCSSSSEEESTTHHHHHHHTTCCCCHHHHHHHTTCCCHHHHTTCEEEHHHHHHHHHHHCC----
T ss_pred CCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCcCcCCCCcCcHHHHHHHHHHHhccCCC
Confidence 5667788899999999999999999999999999999999999999999999999 9999999999999876543 1
Q ss_pred CcHHHHHHHHHHhccCCCC
Q 042823 459 ETPELLEKAFQYLDKNSDQ 477 (477)
Q Consensus 459 ~~~~~l~~aF~~~D~d~~G 477 (477)
...+.+..+|+.||+|++|
T Consensus 84 ~~~~~l~~~F~~~D~d~~G 102 (151)
T 1w7j_B 84 GTYEDYLEGFRVFDKEGNG 102 (151)
T ss_dssp ----CCHHHHHTTCTTSSS
T ss_pred CcHHHHHHHHHHhCCCCCC
Confidence 2346788899999999998
|
| >1avs_A Troponin C; muscle contraction, calcium-activated, E-F hand calcium-binding protein; 1.75A {Gallus gallus} SCOP: a.39.1.5 PDB: 1blq_A 1skt_A 1tnp_A 1tnq_A 1zac_A 1smg_A 1npq_A 1trf_A | Back alignment and structure |
|---|
Probab=99.43 E-value=5.4e-13 Score=102.05 Aligned_cols=77 Identities=25% Similarity=0.345 Sum_probs=71.2
Q ss_pred HHhcCChHHHHHHHHHhhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhhh
Q 042823 380 LCENLPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIY 456 (477)
Q Consensus 380 ~~~~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~~ 456 (477)
+...++.++..+++.+|+.||+|++|+|+.+||+.+|+.+|..+++++++.+++.+|.+++|.|+|+||+.++....
T Consensus 10 ~~~~l~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~D~~~dg~i~~~eF~~~~~~~~ 86 (90)
T 1avs_A 10 ARAFLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQM 86 (90)
T ss_dssp HHHHBCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTCCSSEEHHHHHHHHHHHH
T ss_pred HHHhCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHHHh
Confidence 34457788889999999999999999999999999999999999999999999999999999999999999987654
|
| >2mys_B Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1i84_U* 1m8q_B* 1mvw_B* 1o18_E* 1o19_B* 1o1a_B* 1o1b_B* 1o1c_B* 1o1d_B* 1o1e_B* 1o1f_B* 1o1g_B* 2w4a_B 2w4g_B 2w4h_B | Back alignment and structure |
|---|
Probab=99.43 E-value=7.6e-13 Score=113.70 Aligned_cols=92 Identities=17% Similarity=0.392 Sum_probs=81.9
Q ss_pred hcCChHHHHHHHHHhhhhcCCCCCCcCHHHHHHHHHHcCC-CCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhhhC-CC
Q 042823 382 ENLPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGS-ALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIYK-LE 459 (477)
Q Consensus 382 ~~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~-~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~~~-~~ 459 (477)
..++.+++.+++.+|..+|.|++|.|+.+||..+|+.+|. .++..++..++... +|.|+|+||+.++..... ..
T Consensus 17 ~~l~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~l~~~~----dg~i~~~eF~~~~~~~~~~~~ 92 (166)
T 2mys_B 17 SMFDETEIEDFKEAFTVIDQNADGIIDKDDLRETFAAMGRLNVKNEELDAMIKEA----SGPINFTVFLTMFGEKLKGAD 92 (166)
T ss_pred hhCCHHHHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHhCCCCCCHHHHHHHHHHC----CCCcCHHHHHHHHHHHhccCC
Confidence 4567788899999999999999999999999999999999 99999999999864 799999999999876543 34
Q ss_pred cHHHHHHHHHHhccCCCC
Q 042823 460 TPELLEKAFQYLDKNSDQ 477 (477)
Q Consensus 460 ~~~~l~~aF~~~D~d~~G 477 (477)
..+.++.+|+.||+|++|
T Consensus 93 ~~~~l~~~F~~~D~d~~G 110 (166)
T 2mys_B 93 PEDVIMGAFKVLDPDGKG 110 (166)
T ss_pred cHHHHHHHHHHhCCCCCc
Confidence 667899999999999998
|
| >3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} | Back alignment and structure |
|---|
Probab=99.42 E-value=1e-12 Score=134.00 Aligned_cols=143 Identities=22% Similarity=0.321 Sum_probs=106.8
Q ss_pred cCCCCCCCccHHHHHH--HHHhhCCCCC---HHHHHHHHHHhh---ccch-----HHHHHhcC-ChHHHHHHHHHhhhhc
Q 042823 335 MDTDKNGTLSYDELRA--GLTKVGSMLT---EFDVKHLMEAVK---NSST-----LESLCENL-PTKEKQKLMEKFREMD 400 (477)
Q Consensus 335 ~D~~~~G~i~~~el~~--~l~~~~~~~~---~~~~~~~~~~~d---~~~~-----~~~~~~~~-~~~~~~~l~~~F~~~D 400 (477)
+..|..-.++.+|+.+ +++....... .......+..+. .... +..+...+ +.+++++++++|+.||
T Consensus 286 L~~dp~~R~t~~e~l~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~~a~l~~i~~~~~~~~~~~~l~~~F~~~D 365 (504)
T 3q5i_A 286 LTYDYNKRCTAEEALNSRWIKKYANNINKSDQKTLCGALSNMRKFEGSQKLAQAAILFIGSKLTTLEERKELTDIFKKLD 365 (504)
T ss_dssp TCSSTTTSCCHHHHHTSHHHHHTCCCCCGGGHHHHHHHHHHHHHCCCCSHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHC
T ss_pred cCCChhHCCCHHHHhcCHhhhhchhcccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcHHHHHHHHHHHHeeC
Confidence 3456666677777632 3444433322 222333333332 2222 23334444 7888999999999999
Q ss_pred CCCCCCcCHHHHHHHHHHc--------CCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhhhCCCcHHHHHHHHHHhc
Q 042823 401 TDNSDTLTLSELKAGLAKL--------GSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIYKLETPELLEKAFQYLD 472 (477)
Q Consensus 401 ~~~~G~I~~~el~~~l~~~--------g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~l~~aF~~~D 472 (477)
.|++|.|+.+||..+++.+ |..+++++++.+++.+|.|+||.|+|+||+.++........+++++.+|+.||
T Consensus 366 ~d~dG~I~~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~I~~~EF~~~~~~~~~~~~~~~~~~~F~~~D 445 (504)
T 3q5i_A 366 KNGDGQLDKKELIEGYNVLRNFKNELGELKNVEEEVDNILKEVDFDKNGYIEYSEFISVCMDKQILFSEERLRRAFNLFD 445 (504)
T ss_dssp TTCSSEECHHHHHHHHHHHHHHC--CCSCCCHHHHHHHHHHHHCTTCSSSEEHHHHHHHHSCHHHHTCHHHHHHHHHHHC
T ss_pred CCCCCeEcHHHHHHHHHHhhhcccccccccccHHHHHHHHHHhCCCCCCcEeHHHHHHHHHhhhcccCHHHHHHHHHHhc
Confidence 9999999999999999988 66888999999999999999999999999999876555566789999999999
Q ss_pred cCCCC
Q 042823 473 KNSDQ 477 (477)
Q Consensus 473 ~d~~G 477 (477)
+|+||
T Consensus 446 ~d~dG 450 (504)
T 3q5i_A 446 TDKSG 450 (504)
T ss_dssp TTCCS
T ss_pred CCCCC
Confidence 99998
|
| >2ehb_A Calcineurin B-like protein 4; protein complex, Ca(II) IONS bound to SOS3 (EF-hands 1 and 4 FISL motif; 2.10A {Arabidopsis thaliana} PDB: 1v1g_A 1v1f_A | Back alignment and structure |
|---|
Probab=99.42 E-value=7.6e-13 Score=118.21 Aligned_cols=93 Identities=18% Similarity=0.259 Sum_probs=80.3
Q ss_pred CChHHHHHHHHHhhhhcCC--CCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhhhC-CCc
Q 042823 384 LPTKEKQKLMEKFREMDTD--NSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIYK-LET 460 (477)
Q Consensus 384 ~~~~~~~~l~~~F~~~D~~--~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~~~-~~~ 460 (477)
++.+++.+++.+|+.+|.| ++|.|+.+||..+|.. .....+..++++++.+|.+++|.|+|+||+.++..... ...
T Consensus 31 ~s~~~~~~l~~~F~~~D~d~~~~G~i~~~e~~~~l~~-~~~~~~~~~~~~f~~~D~d~~g~i~~~Ef~~~~~~~~~~~~~ 109 (207)
T 2ehb_A 31 FTVEEVEALYELFKKLSSSIIDDGLIHKEEFQLALFR-NRNRRNLFADRIFDVFDVKRNGVIEFGEFVRSLGVFHPSAPV 109 (207)
T ss_dssp CCHHHHHHHHHHHHHHTTSSSCSSCEEHHHHHHHHHS-CTTCCCHHHHHHHHHHCTTCSSEECHHHHHHHHGGGSTTSCH
T ss_pred CCHHHHHHHHHHHHHhccccCCCCccCHHHHHHHHhc-cccccHHHHHHHHHHhcCCCCCeEeHHHHHHHHHHHccCCCH
Confidence 5567778899999999999 9999999999999987 43445567888999999999999999999999987654 345
Q ss_pred HHHHHHHHHHhccCCCC
Q 042823 461 PELLEKAFQYLDKNSDQ 477 (477)
Q Consensus 461 ~~~l~~aF~~~D~d~~G 477 (477)
.++++.+|+.||+|++|
T Consensus 110 ~~~l~~~F~~~D~d~~G 126 (207)
T 2ehb_A 110 HEKVKFAFKLYDLRQTG 126 (207)
T ss_dssp HHHHHHHHHHHCTTCCS
T ss_pred HHHHHHHHHHhCCCCCC
Confidence 67899999999999998
|
| >3dtp_E RLC, myosin regulatory light chain; muscle protein, smooth muscle, myosin subfragment 2, heavy meromyosin, essential light chain; 20.00A {Avicularia avicularia} | Back alignment and structure |
|---|
Probab=99.42 E-value=4.6e-13 Score=118.60 Aligned_cols=92 Identities=18% Similarity=0.390 Sum_probs=82.9
Q ss_pred hcCChHHHHHHHHHhhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhhhC-CCc
Q 042823 382 ENLPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIYK-LET 460 (477)
Q Consensus 382 ~~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~~~-~~~ 460 (477)
..++.+++..++.+|..||.|++|.|+.+||..+|+.+|..++..++..++..+ +|.|+|+||+.++..... ...
T Consensus 49 ~~ls~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~lg~~~~~~~~~~l~~~~----~g~i~~~eF~~~~~~~~~~~~~ 124 (196)
T 3dtp_E 49 AMFTQHQVQEFKEAFQLIDQDKDGFISKNDIRATFDSLGRLCTEQELDSMVAEA----PGPINFTMFLTIFGDRIAGTDE 124 (196)
T ss_dssp CSSCTTTHHHHHHHHHHHCCSCSSBCCHHHHHHHHHTTSCCCCHHHHHHHHTTS----SSCCBHHHHHHHHHHCCCSSCC
T ss_pred hhCCHHHHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHc----cCCCcHHHHHHHHHHHhcCCCc
Confidence 346778889999999999999999999999999999999999999999999877 899999999999976543 456
Q ss_pred HHHHHHHHHHhccCCCC
Q 042823 461 PELLEKAFQYLDKNSDQ 477 (477)
Q Consensus 461 ~~~l~~aF~~~D~d~~G 477 (477)
.+.+..+|+.||+|++|
T Consensus 125 ~~~l~~~F~~~D~d~~G 141 (196)
T 3dtp_E 125 EDVIVNAFNLFDEGDGK 141 (196)
T ss_dssp HHHHHHHHHTTCSSSSC
T ss_pred HHHHHHHHHHHCCCCCC
Confidence 78899999999999998
|
| >1jba_A GCAP-2, protein (guanylate cyclase activating protein 2); EF-hand, calcium-binding protein, guanylyl cyclase regulation, lyase; NMR {Bos taurus} SCOP: a.39.1.5 | Back alignment and structure |
|---|
Probab=99.41 E-value=5.7e-13 Score=118.79 Aligned_cols=91 Identities=21% Similarity=0.283 Sum_probs=84.2
Q ss_pred HHHHHHHHHhhhhcCC-CCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhhhCCCcHHHHH
Q 042823 387 KEKQKLMEKFREMDTD-NSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIYKLETPELLE 465 (477)
Q Consensus 387 ~~~~~l~~~F~~~D~~-~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~l~ 465 (477)
-..++++++|+.||.+ ++|.|+.+||..+++.+|...+.++++.+++.+|.|++|.|+|+||+.++.......+.+++.
T Consensus 19 ~~~~el~~~f~~~D~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~Ef~~~~~~~~~~~~~~~~~ 98 (204)
T 1jba_A 19 ADAAQLQEWYKKFLEECPSGTLFMHEFKRFFKVPDNEEATQYVEAMFRAFDTNGDNTIDFLEYVAALNLVLRGTLEHKLK 98 (204)
T ss_dssp HHHHHHHHHHHHHHSSSTTCCEEHHHHHHHHHCCSSSTTHHHHHHHHHHHCCSSSSEECHHHHHHHHHHHSSCCCTHHHH
T ss_pred CCHHHHHHHHHHHHhhCCCCCcCHHHHHHHHHHhcCCCcHHHHHHHHHHHcCCCCCeEeHHHHHHHHHHHccCCHHHHHH
Confidence 3567889999999999 899999999999999999999999999999999999999999999999998766666778899
Q ss_pred HHHHHhccCCCC
Q 042823 466 KAFQYLDKNSDQ 477 (477)
Q Consensus 466 ~aF~~~D~d~~G 477 (477)
.+|+.||+|++|
T Consensus 99 ~~F~~~D~d~~G 110 (204)
T 1jba_A 99 WTFKIYDKDRNG 110 (204)
T ss_dssp HHHHHHCSSCSS
T ss_pred HHHHHhCCCCCC
Confidence 999999999998
|
| >1xk4_C Calgranulin B; S100 family, heterotetramer, metal binding protein; HET: FLC; 1.80A {Homo sapiens} SCOP: a.39.1.2 PDB: 1irj_A* | Back alignment and structure |
|---|
Probab=99.41 E-value=5.7e-13 Score=106.42 Aligned_cols=85 Identities=18% Similarity=0.228 Sum_probs=65.3
Q ss_pred HHHHHHHHHhhhhc-CCCCC-CcCHHHHHHHHH-HcCCC-----CCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhhhCC
Q 042823 387 KEKQKLMEKFREMD-TDNSD-TLTLSELKAGLA-KLGSA-----LEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIYKL 458 (477)
Q Consensus 387 ~~~~~l~~~F~~~D-~~~~G-~I~~~el~~~l~-~~g~~-----~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~ 458 (477)
+++++++++|+.|| +|++| +|+.+||+.+|+ .+|.. +++.+++.+++.+|.|+||.|+|+||+.++....
T Consensus 9 ~~~~~l~~~F~~fD~~dgdG~~Is~~El~~~l~~~lg~~~~~~~~~~~~v~~l~~~~D~d~dG~I~f~EF~~~~~~~~-- 86 (113)
T 1xk4_C 9 RNIETIINTFHQYSVKLGHPDTLNQGEFKELVRKDLQNFLKKENKNEKVIEHIMEDLDTNADKQLSFEEFIMLMARLT-- 86 (113)
T ss_dssp HHHHHHHHHHHHHHTTSSSTTSBCHHHHHHHHHHHTTTTTTTGGGCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHH--
T ss_pred HHHHHHHHHHHHHhhcCCCCCEECHHHHHHHHHHHhhhhhcccccCHHHHHHHHHHhCCCCCCCEeHHHHHHHHHHHH--
Confidence 34678999999999 49999 999999999999 78853 5899999999999999999999999999997643
Q ss_pred CcHHHHHHHHHHhccCCCC
Q 042823 459 ETPELLEKAFQYLDKNSDQ 477 (477)
Q Consensus 459 ~~~~~l~~aF~~~D~d~~G 477 (477)
.....+|...| +++|
T Consensus 87 ---~~~~~~f~~~~-~~~g 101 (113)
T 1xk4_C 87 ---WASHEKMHEGD-EGPG 101 (113)
T ss_dssp ---HHHHC-----------
T ss_pred ---HHHHHHHhhCC-CCCc
Confidence 34566888888 8876
|
| >2ccm_A Calexcitin; EF hand, calcium, signaling protein; 1.8A {Loligo pealeii} | Back alignment and structure |
|---|
Probab=99.41 E-value=4.4e-13 Score=118.09 Aligned_cols=95 Identities=13% Similarity=0.267 Sum_probs=83.7
Q ss_pred cCChHHHHHHHHHhhhh-cCCCCCCcCHHHHHHHHHHc----CCCCCHHHHHHHH-----------HHhcCCCCCcccHH
Q 042823 383 NLPTKEKQKLMEKFREM-DTDNSDTLTLSELKAGLAKL----GSALEESEVNQYM-----------EAGDIDGNGNIDSI 446 (477)
Q Consensus 383 ~~~~~~~~~l~~~F~~~-D~~~~G~I~~~el~~~l~~~----g~~~~~~~i~~~~-----------~~~d~~~~g~i~~~ 446 (477)
.++..+.++++.+|+.+ |.|++|.|+.+||..+++.+ |..++..+++.++ +.+|.|++|.|+|+
T Consensus 5 ~ls~~~~~~l~~~F~~~~D~d~dG~i~~~E~~~~l~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~D~d~dG~i~~~ 84 (191)
T 2ccm_A 5 QLSDFQRNKILRVFNTFYDCNHDGVIEWDDFELAIKKICNLHSWPTDGKKHNEARATLKLIWDGLRKYADENEDEQVTKE 84 (191)
T ss_dssp CCCHHHHHHHHHHHHHHTCTTCSSEECHHHHHHHHHHHHHHHTCCTTSHHHHHHHHHHHHHHHHHHHHHCTTCSSCEEHH
T ss_pred hccHHHHHHHHHhccccccCCCCCeeeHHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCCeECHH
Confidence 45677888999999999 99999999999999999998 9999999999998 99999999999999
Q ss_pred HHHHHHHhhhC---------CCcHHHHHHHHHHhccCCCC
Q 042823 447 EFVNLMTDIYK---------LETPELLEKAFQYLDKNSDQ 477 (477)
Q Consensus 447 eF~~~~~~~~~---------~~~~~~l~~aF~~~D~d~~G 477 (477)
||+.++..... ....+.+..+|+.+|+|+||
T Consensus 85 Ef~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~dG 124 (191)
T 2ccm_A 85 EWLKMWAECVKSVEKGESLPEWLTKYMNFMFDVNDTSGDN 124 (191)
T ss_dssp HHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHCTTCSS
T ss_pred HHHHHHHHHhccccchhhchHHHHHHHHHHHHHhCCCCCC
Confidence 99998876421 12246789999999999998
|
| >2joj_A Centrin protein; N-terminal domain, centrin solution structure, EF-hand calcium binding protein, cell cycle; NMR {Euplotes octocarinatus} | Back alignment and structure |
|---|
Probab=99.41 E-value=4.6e-13 Score=99.11 Aligned_cols=71 Identities=30% Similarity=0.518 Sum_probs=67.0
Q ss_pred ChHHHHHHHHHhhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhh
Q 042823 385 PTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDI 455 (477)
Q Consensus 385 ~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~ 455 (477)
+.++.+.++.+|+.||.|++|.|+.+||+.+++.+|..+++.+++.+++.+|.+++|.|+|+||+.++...
T Consensus 2 s~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~~ 72 (77)
T 2joj_A 2 SEEQKQEIKEAFDLFDTNKTGSIDYHELKVAMRALGFDVKKPEILELMNEYDREGNGYIGFDDFLDIMTEK 72 (77)
T ss_dssp CHHHHHHHHHHHHHHCCSSSSEEEHHHHHHHHHHHTCCCHHHHHHHHHHHHCCSSSSEEEHHHHHHHHTHH
T ss_pred CHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhCCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHH
Confidence 56678899999999999999999999999999999999999999999999999999999999999998754
|
| >2lnk_A Protein S100-A4; EF-hand, calcium binding, all alpha, metal binding protein, binding protein; NMR {Homo sapiens} PDB: 3c1v_A | Back alignment and structure |
|---|
Probab=99.41 E-value=5.9e-13 Score=105.38 Aligned_cols=69 Identities=23% Similarity=0.384 Sum_probs=63.4
Q ss_pred HHHHHHHHHhhhhc-CCCCC-CcCHHHHHHHHHH-----cCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhh
Q 042823 387 KEKQKLMEKFREMD-TDNSD-TLTLSELKAGLAK-----LGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDI 455 (477)
Q Consensus 387 ~~~~~l~~~F~~~D-~~~~G-~I~~~el~~~l~~-----~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~ 455 (477)
..+++++++|+.|| +|++| +|+.+||+.+|+. +|..+++++++++++.+|.|+||.|+|+||+.+|...
T Consensus 19 ~~~~~l~~aF~~fD~~dgdGG~Is~~EL~~~l~~~l~~~lg~~~t~~ev~~li~~~D~dgdG~Idf~EF~~~m~~~ 94 (113)
T 2lnk_A 19 KALDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVFLSCI 94 (113)
T ss_dssp HHHHHHHHHHHHTTTTTSCTTCBCHHHHHHHHHHHCGGGGTTCCCTTHHHHHHHHHCSSSSSCBCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHcccCCCCCEECHHHHHHHHHHHcchhcCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHH
Confidence 45678999999999 89997 9999999999987 7888999999999999999999999999999998753
|
| >2hpk_A Photoprotein berovin; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 2.00A {Beroe abyssicola} | Back alignment and structure |
|---|
Probab=99.41 E-value=2e-13 Score=122.16 Aligned_cols=95 Identities=14% Similarity=0.207 Sum_probs=78.4
Q ss_pred cCChHHHHHHHHHhhhhcCCCCCCcCHHHHHHHHHHcCC--CCCHHHHHHHH-------HHhcCCCCCcccHHHHHHHHH
Q 042823 383 NLPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGS--ALEESEVNQYM-------EAGDIDGNGNIDSIEFVNLMT 453 (477)
Q Consensus 383 ~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~--~~~~~~i~~~~-------~~~d~~~~g~i~~~eF~~~~~ 453 (477)
.++.+++.+++++|+.+|.|++|.|+.+||..+++.+|. .++++++..++ +.+|.+++|.|+|+||+.++.
T Consensus 29 ~l~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~l~~~~~~lf~~~D~d~dg~i~~~EF~~~~~ 108 (208)
T 2hpk_A 29 DLHPKMLSRLYKRFDTFDLDSDGKMEMDEVLYWPDRMRQLVNATDEQVEKMRDAVRVFFLHKGVEPVNGLLREDWVEANR 108 (208)
T ss_dssp -------CHHHHHHHHHCTTCSSEECHHHHTHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHTTCBTTTBEEGGGHHHHHH
T ss_pred HcCHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHhCCCCCCeEcHHHHHHHHH
Confidence 456677889999999999999999999999999999998 89999999999 999999999999999999886
Q ss_pred ---------hhhC-CCcHHH-HHHHHHHhccCCCC
Q 042823 454 ---------DIYK-LETPEL-LEKAFQYLDKNSDQ 477 (477)
Q Consensus 454 ---------~~~~-~~~~~~-l~~aF~~~D~d~~G 477 (477)
.... ....++ ++.+|+.||+|++|
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G 143 (208)
T 2hpk_A 109 VFAEAERERERRGEPSLIALLSNSYYDVLDDDGDG 143 (208)
T ss_dssp HHHHHHHHHHHTTCCCHHHHHHHHHHHHHCTTCSS
T ss_pred HHhhhhhhhhccCChHHHHHHHHHHHHHhCCCCCC
Confidence 2222 233445 78999999999998
|
| >2r2i_A Guanylyl cyclase-activating protein 1; EF hand, GCAP, guanylate cyclase activating protein, GCAP1, GCAP-1, calcium, lipoprotein, myristate; HET: MYR; 2.00A {Gallus gallus} | Back alignment and structure |
|---|
Probab=99.40 E-value=3.2e-12 Score=113.30 Aligned_cols=104 Identities=24% Similarity=0.329 Sum_probs=88.8
Q ss_pred hhhHHHHHHhhhcCCCCCCCccHHHHHHHHHhhCCCCCHHHHHHHHHHhhccchHHHHHhcCChHHHHHHHHHhhhhcCC
Q 042823 323 EETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNSSTLESLCENLPTKEKQKLMEKFREMDTD 402 (477)
Q Consensus 323 ~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~F~~~D~~ 402 (477)
.....+..+|..+|.+++|.|+..||..++..++...+ .+.++.+|+.||.|
T Consensus 49 ~~~~~~~~~f~~~D~d~~G~I~~~Ef~~~~~~~~~~~~----------------------------~~~~~~~F~~~D~d 100 (198)
T 2r2i_A 49 SANKYVEQMFETFDFNKDGYIDFMEYVAALSLVLKGKV----------------------------DQKLRWYFKLYDVD 100 (198)
T ss_dssp HHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHSSCCH----------------------------HHHHHHHHHHHCTT
T ss_pred chHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHHccCch----------------------------HHHHHHHHHHhcCC
Confidence 34456889999999999999999999999887764322 24677899999999
Q ss_pred CCCCcCHHHHHHHHHHcC------CCCCHHH-HHHHHHHhcCCCCCcccHHHHHHHHHh
Q 042823 403 NSDTLTLSELKAGLAKLG------SALEESE-VNQYMEAGDIDGNGNIDSIEFVNLMTD 454 (477)
Q Consensus 403 ~~G~I~~~el~~~l~~~g------~~~~~~~-i~~~~~~~d~~~~g~i~~~eF~~~~~~ 454 (477)
++|+|+.+||..++..++ ..++.++ +..+++.+|.|++|.|+|+||+.++..
T Consensus 101 ~~G~I~~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~ 159 (198)
T 2r2i_A 101 GNGCIDRGELLNIIKAIRAINRCNEAMTAEEFTNMVFDKIDINGDGELSLEEFMEGVQK 159 (198)
T ss_dssp CSSCEEHHHHHHHHHHTTGGGGSSSCCCHHHHHHHHHHHHCTTCSSEECHHHHHHHHTT
T ss_pred CCCcCcHHHHHHHHHHHHhhcCCCchhhHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHc
Confidence 999999999999999886 5566554 899999999999999999999998863
|
| >1qv0_A Obelin, OBL; photoprotein, bioluminescence, atomic resolution, Ca binding, EF-hand, luminescent protein; HET: CZH; 1.10A {Obelia longissima} SCOP: a.39.1.5 PDB: 1qv1_A* 1sl9_A* 1el4_A* 2f8p_A* 1sl7_A 1jf2_A* 1s36_A* 1jf0_A* 3kpx_A* | Back alignment and structure |
|---|
Probab=99.40 E-value=3.8e-13 Score=118.86 Aligned_cols=95 Identities=18% Similarity=0.256 Sum_probs=76.5
Q ss_pred cCChHHHHHHHHHhhhhcCCCCCCcCHHHHH-----HHHHHcCCCCCHH-----HHHHHHHHhcCCCCCcccHHHHHHHH
Q 042823 383 NLPTKEKQKLMEKFREMDTDNSDTLTLSELK-----AGLAKLGSALEES-----EVNQYMEAGDIDGNGNIDSIEFVNLM 452 (477)
Q Consensus 383 ~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~-----~~l~~~g~~~~~~-----~i~~~~~~~d~~~~g~i~~~eF~~~~ 452 (477)
.++++++++++++|+.+|.|++|.|+.+||. .+++.+|..+++. ++..+++.+|.+++|.|+|+||+.++
T Consensus 13 ~~s~~~~~~l~~~F~~~D~d~~G~i~~~El~~~~~~~~l~~~g~~~~~~~~~~~~~~~l~~~~D~d~~g~i~~~EF~~~~ 92 (195)
T 1qv0_A 13 FDNPRWIKRHKHMFDFLDINGNGKITLDEIVSKASDDICAKLEATPEQTKRHQVCVEAFFRGCGMEYGKEIAFPQFLDGW 92 (195)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHTHHHHTTCCHHHHHHHHHHHHHHHHHTTCCTTCCBCHHHHHHHH
T ss_pred cCCHHHHHHHHHHHhHcCCCCCCcCcHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHHHcCCCCCceEcHHHHHHHH
Confidence 3477889999999999999999999999999 7889999988877 68999999999999999999999988
Q ss_pred HhhhC-------CCcHHHHH----HHHHHhccCCCC
Q 042823 453 TDIYK-------LETPELLE----KAFQYLDKNSDQ 477 (477)
Q Consensus 453 ~~~~~-------~~~~~~l~----~aF~~~D~d~~G 477 (477)
..... ....+.++ .+|+.||+|++|
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G 128 (195)
T 1qv0_A 93 KQLATSELKKWARNEPTLIREWGDAVFDIFDKDGSG 128 (195)
T ss_dssp HHHHHHHHHHHHTTCCCHHHHHHHHHHHHTC----C
T ss_pred HHHHhhhhhcccccHHHHHHHHHHHHHHHhcCCCCC
Confidence 65322 11112344 899999999998
|
| >1bjf_A Neurocalcin delta; calcium-binding, myristoylation, neuronal specific guanylate cyclase activator; 2.40A {Bos taurus} SCOP: a.39.1.5 | Back alignment and structure |
|---|
Probab=99.40 E-value=4.1e-12 Score=111.95 Aligned_cols=138 Identities=22% Similarity=0.337 Sum_probs=107.6
Q ss_pred CCCCCccHHHHHHHHHhhCCCCCHHHHHHHHHHhhcc---c--hHHHHHh---cCC--hHHHHHHHHHhhhhcCCCCCCc
Q 042823 338 DKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNS---S--TLESLCE---NLP--TKEKQKLMEKFREMDTDNSDTL 407 (477)
Q Consensus 338 ~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~---~--~~~~~~~---~~~--~~~~~~l~~~F~~~D~~~~G~I 407 (477)
+..+.++..++....... .++..++..+++.+|.+ + +..++.. .+. ......+..+|+.+|.|++|.|
T Consensus 3 ~~~s~l~~~~l~~l~~~~--~~~~~~i~~~f~~fd~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~g~i 80 (193)
T 1bjf_A 3 KQNSKLRPEVMQDLLEST--DFTEHEIQEWYKGFLRDCPSGHLSMEEFKKIYGNFFPYGDASKFAEHVFRTFDANGDGTI 80 (193)
T ss_dssp --CCCCCHHHHHHHHHHS--SCCHHHHHHHHHHHHHHSTTSEEEHHHHHHHHTTTSSSSCCHHHHHHHHHHHCSSCSSEE
T ss_pred cccccCCHHHHHHHHHHc--CCCHHHHHHHHHHHHHHCCCCCcCHHHHHHHHHHhcCcCChHHHHHHHHHHhCCCCCCcC
Confidence 456678888888755543 56888999999888743 2 2444433 331 1224568899999999999999
Q ss_pred CHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhhhC------------CCcHHHHHHHHHHhccCC
Q 042823 408 TLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIYK------------LETPELLEKAFQYLDKNS 475 (477)
Q Consensus 408 ~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~~~------------~~~~~~l~~aF~~~D~d~ 475 (477)
+.+||..++..++...+++++..+++.+|.|++|.|+++||..++..... ...++.+..+|+.+|+|+
T Consensus 81 ~~~Ef~~~~~~~~~~~~~~~~~~~f~~~D~d~~G~I~~~E~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~ 160 (193)
T 1bjf_A 81 DFREFIIALSVTSRGKLEQKLKWAFSMYDLDGNGYISKAEMLEIVQAIYKMVSSVMKMPEDESTPEKRTEKIFRQMDTNR 160 (193)
T ss_dssp EHHHHHHHHHHHTSSCHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHTTCCCTTTSCGGGSSHHHHHHHHHHHSCTTC
T ss_pred cHHHHHHHHHHHcCCCHHHHHHHHHhhcCCCCCCeECHHHHHHHHHHHHHHhccccCCCcccccHHHHHHHHHHHhCCCC
Confidence 99999999999988888999999999999999999999999999876421 122467999999999999
Q ss_pred CC
Q 042823 476 DQ 477 (477)
Q Consensus 476 ~G 477 (477)
||
T Consensus 161 dG 162 (193)
T 1bjf_A 161 DG 162 (193)
T ss_dssp SS
T ss_pred CC
Confidence 98
|
| >1alv_A Calpain, S-camld; calcium binding, calmodulin like, domain of cystein protease; 1.90A {Sus scrofa} SCOP: a.39.1.8 PDB: 1alw_A* 1nx0_A 1nx1_A 1nx2_A 1nx3_A* 1kfu_S 1kfx_S 3bow_B 1u5i_B 1df0_B 3df0_B 1aj5_A 1dvi_A 1np8_A | Back alignment and structure |
|---|
Probab=99.40 E-value=5.8e-13 Score=115.41 Aligned_cols=83 Identities=17% Similarity=0.259 Sum_probs=76.5
Q ss_pred HHHHHHHHhhhhcCCCCCCcCHHHHHHHHHHc-C-------CCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhhhCCC
Q 042823 388 EKQKLMEKFREMDTDNSDTLTLSELKAGLAKL-G-------SALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIYKLE 459 (477)
Q Consensus 388 ~~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~-g-------~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~~ 459 (477)
++++++++|+.+| |++|.|+.+||+.+|+.+ | ..+++++++.+++.+|.+++|.|+|+||+.++...
T Consensus 2 ~~~~l~~~F~~~D-d~~G~i~~~el~~~l~~~~g~~~~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~eF~~~~~~~---- 76 (173)
T 1alv_A 2 EVRQFRRLFAQLA-GDDMEVSATELMNILNKVVTRHPDLKTDGFGIDTCRSMVAVMDSDTTGKLGFEEFKYLWNNI---- 76 (173)
T ss_dssp HHHHHHHHHHHHH-GGGTSBCHHHHHHHHHHHHHTCSTTCCSCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHH----
T ss_pred chhHHHHHHHHHh-CCCCCcCHHHHHHHHHHhhhcccccccCCCCHHHHHHHHHHHcCCCCCccCHHHHHHHHHHH----
Confidence 5678999999999 999999999999999997 7 78899999999999999999999999999988753
Q ss_pred cHHHHHHHHHHhccCCCC
Q 042823 460 TPELLEKAFQYLDKNSDQ 477 (477)
Q Consensus 460 ~~~~l~~aF~~~D~d~~G 477 (477)
++++.+|+.||+|++|
T Consensus 77 --~~~~~~F~~~D~d~~G 92 (173)
T 1alv_A 77 --KKWQAIYKQFDVDRSG 92 (173)
T ss_dssp --HHHHHHHHHHCTTCCS
T ss_pred --HHHHHHHHHHCCCCCC
Confidence 5799999999999998
|
| >1uhk_A Aequorin 2, aequorin; EF-hand motif, complex, luminescent protein; HET: CZN; 1.60A {Aequorea victoria} SCOP: a.39.1.5 PDB: 1ej3_A* 1uhi_A* 1uhj_A* 1uhh_A* 1sl8_A | Back alignment and structure |
|---|
Probab=99.40 E-value=4.3e-13 Score=118.07 Aligned_cols=94 Identities=15% Similarity=0.275 Sum_probs=80.0
Q ss_pred CChHHHHHHHHHhhhhcCCCCCCcCHHHHH-----HHHHHcCCCCCHH-----HHHHHHHHhcCCCCCcccHHHHHHHHH
Q 042823 384 LPTKEKQKLMEKFREMDTDNSDTLTLSELK-----AGLAKLGSALEES-----EVNQYMEAGDIDGNGNIDSIEFVNLMT 453 (477)
Q Consensus 384 ~~~~~~~~l~~~F~~~D~~~~G~I~~~el~-----~~l~~~g~~~~~~-----~i~~~~~~~d~~~~g~i~~~eF~~~~~ 453 (477)
++.+++++++.+|+.+|.|++|.|+.+||. .+++.+|..+++. +++.+++.+|.+++|.|+|+||+.++.
T Consensus 10 ~~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~~~~~~l~~~g~~~~~~~~~~~~~~~l~~~~D~d~~g~i~~~EF~~~~~ 89 (191)
T 1uhk_A 10 DNPRWIGRHKHMFNFLDVNHNGKISLDEMVYKASDIVINNLGATPEQAKRHKDAVEAFFGGAGMKYGVETDWPAYIEGWK 89 (191)
T ss_dssp TCHHHHHHHHHHHHHHCTTCCSEEEHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHTTCCTTCEEEHHHHHHHHH
T ss_pred CCHHHHHHHHHHHhhccCCCCCcCcHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHhCcCCCCcCcHHHHHHHHH
Confidence 456788899999999999999999999999 8899999998888 689999999999999999999999876
Q ss_pred hhhC-------CCcHHHHH----HHHHHhccCCCC
Q 042823 454 DIYK-------LETPELLE----KAFQYLDKNSDQ 477 (477)
Q Consensus 454 ~~~~-------~~~~~~l~----~aF~~~D~d~~G 477 (477)
.... ....+.++ .+|+.||+|++|
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G 124 (191)
T 1uhk_A 90 KLATDELEKYAKNEPTLIRIWGDALFDIVDKDQNG 124 (191)
T ss_dssp HHHHHHHHHHHTTCCCHHHHHHHHHHHHHCTTCSS
T ss_pred HHhcchhhhhhhhhHHHHHHHHHHHHHHhcCCCCC
Confidence 5422 11112344 899999999998
|
| >1fi6_A EH domain protein REPS1; EPS15 homology domain, EF hand, calcium, RAS signal transduction, endocytosis/exocytosis complex; NMR {Mus musculus} SCOP: a.39.1.6 | Back alignment and structure |
|---|
Probab=99.40 E-value=7.7e-13 Score=101.52 Aligned_cols=69 Identities=20% Similarity=0.268 Sum_probs=64.1
Q ss_pred CChHHHHHHHHHhhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHh
Q 042823 384 LPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTD 454 (477)
Q Consensus 384 ~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~ 454 (477)
++.++.++++++|+.||+|++|+|+.+|++.+|+.+| ++++++.++++.+|.|+||.|+|+||+.+|..
T Consensus 3 ls~~~~~~~~~~F~~~D~d~dG~I~~~el~~~l~~~g--~~~~~~~~i~~~~D~d~dG~i~~~EF~~~~~~ 71 (92)
T 1fi6_A 3 ITDEQRQYYVNQFKTIQPDLNGFIPGSAAKEFFTKSK--LPILELSHIWELSDFDKDGALTLDEFCAAFHL 71 (92)
T ss_dssp CCHHHHHHHHHHHTTTCCSTTCEEEHHHHHHHHHHHS--SCHHHHHHHHHHHCTTCSSEEEHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHcC--CCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
Confidence 4667788999999999999999999999999999987 67899999999999999999999999998864
|
| >3zwh_A Protein S100-A4; Ca-binding protein-motor protein complex, S100 proteins, EF-; 1.94A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.40 E-value=9.9e-13 Score=102.67 Aligned_cols=69 Identities=22% Similarity=0.339 Sum_probs=61.2
Q ss_pred HHHHHHHHHhhhhc-CCCC-CCcCHHHHHHHHHH-cC----CCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhh
Q 042823 387 KEKQKLMEKFREMD-TDNS-DTLTLSELKAGLAK-LG----SALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDI 455 (477)
Q Consensus 387 ~~~~~l~~~F~~~D-~~~~-G~I~~~el~~~l~~-~g----~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~ 455 (477)
..+++++++|+.|| .|++ |+|+.+||+.+|+. +| ..+++++++++++.+|.|+||.|+|+||+.+|...
T Consensus 10 ~~~~~l~~aF~~fD~~dgd~G~Is~~EL~~~l~~~lg~~l~~~~~~~ev~~~i~~~D~dgDG~Idf~EF~~~m~~~ 85 (104)
T 3zwh_A 10 KALDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSWLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVFLSSI 85 (104)
T ss_dssp HHHHHHHHHHHHHHTSSSSTTSBCHHHHHHHHHHHCGGGSCSSCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccCCCCCeECHHHHHHHHHHHcchhccCCCCHHHHHHHHHHHcCCCCCCCcHHHHHHHHHHH
Confidence 34678999999997 7885 89999999999986 54 56789999999999999999999999999998754
|
| >1jfj_A Ehcabp, calcium-binding protein; EF-hand, helix-loop-helix, metal binding protein; NMR {Entamoeba histolytica} SCOP: a.39.1.5 PDB: 1jfk_A 2nxq_A 3px1_A 3qjk_A 2jnx_A 2i18_A | Back alignment and structure |
|---|
Probab=99.39 E-value=3.5e-13 Score=111.00 Aligned_cols=86 Identities=24% Similarity=0.348 Sum_probs=60.5
Q ss_pred HHHHhhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhh---hCCCcHHHHHHHH
Q 042823 392 LMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDI---YKLETPELLEKAF 468 (477)
Q Consensus 392 l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~---~~~~~~~~l~~aF 468 (477)
++++|..+|.|++|.|+.+||..+++.+|..++++++..+++.+|.+++|.|+|+||+.++... ....+.+++..+|
T Consensus 2 l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~~~f 81 (134)
T 1jfj_A 2 AEALFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYGSIQGQDLSDDKIGLKVLY 81 (134)
T ss_dssp HHHHHHHHCTTCSSEEEHHHHHHHHHTTCCSSHHHHHHHHHHHHCSSCCSEEEHHHHHHHTTCSSCCSSHHHHHHHHHHH
T ss_pred HHHHHHHHCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHHcCCCCCeEcHHHHHHHHHHhcccccCCCHHHHHHHH
Confidence 4567777777777777777777777777777777777777777777777777777777776421 1112335577777
Q ss_pred HHhccCCCC
Q 042823 469 QYLDKNSDQ 477 (477)
Q Consensus 469 ~~~D~d~~G 477 (477)
+.+|+|++|
T Consensus 82 ~~~D~d~~G 90 (134)
T 1jfj_A 82 KLMDVDGDG 90 (134)
T ss_dssp HHHCCSSSS
T ss_pred HHHCCCCCC
Confidence 777777776
|
| >1g8i_A Frequenin, neuronal calcium sensor 1; calcium binding-protein, EF-hand, calcium ION, metal binding protein; HET: 1PE P6G; 1.90A {Homo sapiens} SCOP: a.39.1.5 PDB: 2lcp_A | Back alignment and structure |
|---|
Probab=99.39 E-value=2.4e-12 Score=113.22 Aligned_cols=137 Identities=18% Similarity=0.289 Sum_probs=107.1
Q ss_pred CCCCccHHHHHHHHHhhCCCCCHHHHHHHHHHhhcc---c--hHHHHH---hcC-C-hHHHHHHHHHhhhhcCCCCCCcC
Q 042823 339 KNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNS---S--TLESLC---ENL-P-TKEKQKLMEKFREMDTDNSDTLT 408 (477)
Q Consensus 339 ~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~---~--~~~~~~---~~~-~-~~~~~~l~~~F~~~D~~~~G~I~ 408 (477)
..+.++.+++..+.... .++..++..+++.+|.. + +..++. ..+ . ......+..+|+.+|.|++|.|+
T Consensus 4 ~~~~l~~~~l~~l~~~~--~~~~~~i~~~f~~fd~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~g~i~ 81 (190)
T 1g8i_A 4 SNSKLKPEVVEELTRKT--YFTEKEVQQWYKGFIKDCPSGQLDAAGFQKIYKQFFPFGDPTKFATFVFNVFDENKDGRIE 81 (190)
T ss_dssp CCCSCCHHHHHHHHHTS--SSCHHHHHHHHHHHHHHCTTSEEEHHHHHHHHHHHCTTSCTHHHHHHHHHHHCTTCSSEEE
T ss_pred ccccCCHHHHHHHHHcc--CCCHHHHHHHHHHHHHhCCCCcCCHHHHHHHHHHhCCCCChHHHHHHHHHHHhcCCCCeEe
Confidence 35577888887766654 45788888888888643 2 233333 222 0 11234688999999999999999
Q ss_pred HHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhhh------------CCCcHHHHHHHHHHhccCCC
Q 042823 409 LSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIY------------KLETPELLEKAFQYLDKNSD 476 (477)
Q Consensus 409 ~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~~------------~~~~~~~l~~aF~~~D~d~~ 476 (477)
.+||..++..++...+++++..+++.+|.+++|.|+++||..++.... ...+++++..+|+.+|+|+|
T Consensus 82 ~~ef~~~~~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~e~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~d 161 (190)
T 1g8i_A 82 FSEFIQALSVTSRGTLDEKLRWAFKLYDLDNDGYITRNEMLDIVDAIYQMVGNTVELPEEENTPEKRVDRIFAMMDKNAD 161 (190)
T ss_dssp HHHHHHHHHHHHHCCHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHHHC-----CCGGGSSHHHHHHHHHHHHCSSCS
T ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHhhcCCCCCeECHHHHHHHHHHHHHHhCCccCCccccccHHHHHHHHHHHhcCCCC
Confidence 999999999988788889999999999999999999999999987631 13456789999999999999
Q ss_pred C
Q 042823 477 Q 477 (477)
Q Consensus 477 G 477 (477)
|
T Consensus 162 G 162 (190)
T 1g8i_A 162 G 162 (190)
T ss_dssp S
T ss_pred C
Confidence 8
|
| >3a4u_B Multiple coagulation factor deficiency protein 2; lectin, ergic, ER, golgi, transport, disulfide bond, endopla reticulum, ER-golgi transport; 1.84A {Homo sapiens} PDB: 2vrg_A 3lcp_C | Back alignment and structure |
|---|
Probab=99.39 E-value=2e-13 Score=114.27 Aligned_cols=102 Identities=20% Similarity=0.232 Sum_probs=53.0
Q ss_pred HHHHhhhcCCCCCCCccHHHHHHHHHhhCCCCCHHHHHHHHHHhhccchHHHHHhcCChHHHHHHHHHhhhhcCCCCCCc
Q 042823 328 LKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNSSTLESLCENLPTKEKQKLMEKFREMDTDNSDTL 407 (477)
Q Consensus 328 l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~F~~~D~~~~G~I 407 (477)
....|..+|.|++|.|+.+||..++..+..... . .....+.++.+|+.||.|++|+|
T Consensus 29 ~~~~f~~~D~d~dG~I~~~Ef~~~l~~~~~~~~---------------------~--~~~~~~~l~~~F~~~D~d~dG~I 85 (143)
T 3a4u_B 29 SFSQPGSMGLDKNTVHDQEHIMEHLEGVINKPE---------------------A--EMSPQELQLHYFKMHDYDGNNLL 85 (143)
T ss_dssp ---------------------------------------------------------CCCHHHHHHHHHHHTCTTCSSCE
T ss_pred CHHHHHHhCCCCCCcCcHHHHHHHHHHHhcccc---------------------c--ccCHHHHHHHHHHHhCCCCCCcc
Confidence 456899999999999999999987766421000 0 01123578899999999999999
Q ss_pred CHHHHHHHHHHc--------CCCCCHHHHHHHH----HHhcCCCCCcccHHHHHHHH
Q 042823 408 TLSELKAGLAKL--------GSALEESEVNQYM----EAGDIDGNGNIDSIEFVNLM 452 (477)
Q Consensus 408 ~~~el~~~l~~~--------g~~~~~~~i~~~~----~~~d~~~~g~i~~~eF~~~~ 452 (477)
+.+||+.++..+ |..++++++..++ +.+|.|+||.|+|+||+.++
T Consensus 86 ~~~El~~~l~~~~~~~~~~~g~~~s~~e~~~~~~~~f~~~D~d~dG~Is~~EF~~~~ 142 (143)
T 3a4u_B 86 DGLELSTAITHVHKEEGSEQAPLMSEDELINIIDGVLRDDDKNNDGYIDYAEFAKSL 142 (143)
T ss_dssp EHHHHHHTCC-------------CCHHHHHHHHHHHHHHHCTTCSSEECHHHHHC--
T ss_pred CHHHHHHHHHHHHhhhccccCCCCCHHHHHHHHHHHHHHcCCCCCCcEeHHHHHHHH
Confidence 999999999887 3578999987666 99999999999999998765
|
| >3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* | Back alignment and structure |
|---|
Probab=99.39 E-value=4.9e-12 Score=128.35 Aligned_cols=99 Identities=30% Similarity=0.472 Sum_probs=85.6
Q ss_pred HHHhc-CChHHHHHHHHHhhhhcCCCCCCcCHHHHHHH----HHHcCCCCC----------HHHHHHHHHHhcCCCCCcc
Q 042823 379 SLCEN-LPTKEKQKLMEKFREMDTDNSDTLTLSELKAG----LAKLGSALE----------ESEVNQYMEAGDIDGNGNI 443 (477)
Q Consensus 379 ~~~~~-~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~----l~~~g~~~~----------~~~i~~~~~~~d~~~~g~i 443 (477)
.++.. ++.+++++++++|+.||.|++|.|+.+||..+ ++.+|..++ +++++.+++.+|.|+||.|
T Consensus 319 ~ia~~l~~~~~~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~I 398 (486)
T 3mwu_A 319 YMASKLTTLDETKQLTEIFRKLDTNNDGMLDRDELVRGYHEFMRLKGVDSNSLIQNEGSTIEDQIDSLMPLLDMDGSGSI 398 (486)
T ss_dssp HHHHHHCCHHHHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHHHHHTCCGGGHHHHTSSCHHHHHHHHHHHHCTTCCSSB
T ss_pred HHHHHhccHHHHHHHHHHHHHhCCCCCceeeHHHHHHHHHHhhhhhcccchhcccccchhhHHHHHHHHHHhcCCCCCcC
Confidence 34444 37788999999999999999999999999554 455687766 8899999999999999999
Q ss_pred cHHHHHHHHHhhhCCCcHHHHHHHHHHhccCCCC
Q 042823 444 DSIEFVNLMTDIYKLETPELLEKAFQYLDKNSDQ 477 (477)
Q Consensus 444 ~~~eF~~~~~~~~~~~~~~~l~~aF~~~D~d~~G 477 (477)
+|+||+.++........++++..+|+.||+|+||
T Consensus 399 ~~~Ef~~~~~~~~~~~~~~~~~~~F~~~D~d~dG 432 (486)
T 3mwu_A 399 EYSEFIASAIDRTILLSRERMERAFKMFDKDGSG 432 (486)
T ss_dssp CHHHHHHHHSCTTTTCCHHHHHHHHHHHCSSCSS
T ss_pred cHHHHHHHHHhhhccchHHHHHHHHHHhCCCCCC
Confidence 9999999887666666778999999999999998
|
| >1s1e_A KV channel interacting protein 1; kchip, calcium-binding protein, EF-finger, transport protein; 2.30A {Homo sapiens} SCOP: a.39.1.5 | Back alignment and structure |
|---|
Probab=99.39 E-value=2.3e-12 Score=116.57 Aligned_cols=137 Identities=19% Similarity=0.248 Sum_probs=103.3
Q ss_pred CCCCccHHHHHHHHHhhCCCCCHHHHHHHHHHhhc---cc--hHHH---HHhcCCh--HHHHHHHHHhhhhcCCCCCCcC
Q 042823 339 KNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKN---SS--TLES---LCENLPT--KEKQKLMEKFREMDTDNSDTLT 408 (477)
Q Consensus 339 ~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~---~~--~~~~---~~~~~~~--~~~~~l~~~F~~~D~~~~G~I~ 408 (477)
..+.++.+++...++..+ ++..++..+++.++. ++ +..+ +...+.. .....+..+|+.+|.|++|.|+
T Consensus 30 ~~~~l~~~~l~~l~~~~~--~s~~ei~~l~~~Fd~~d~~G~I~~~E~~~~l~~l~~~~~~~~~~~~~f~~~D~d~~G~I~ 107 (224)
T 1s1e_A 30 TMVCHRPEGLEQLEAQTN--FTKRELQVLYRGFKNECPSGVVNEETFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVK 107 (224)
T ss_dssp --------CHHHHHHHSS--CCHHHHHHHHHHHHHHCTTSCBCHHHHHHHHHTTCTTSCCHHHHHHHHHHHCTTCSSCBC
T ss_pred CccCCCHHHHHHHHHHcC--CCHHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHhcCCCCcHHHHHHHHHHhcCCCCCcEe
Confidence 356788888888877765 788889888888764 22 2333 3333321 2456788999999999999999
Q ss_pred HHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhhh-----------C-CCcHHHHHHHHHHhccCCC
Q 042823 409 LSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIY-----------K-LETPELLEKAFQYLDKNSD 476 (477)
Q Consensus 409 ~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~~-----------~-~~~~~~l~~aF~~~D~d~~ 476 (477)
.+||..++..++...+++++..+++.+|.|++|.|+++||..++.... . ....+++..+|+.+|+|+|
T Consensus 108 ~~Ef~~~l~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~E~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~d 187 (224)
T 1s1e_A 108 FEDFVTALSILLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKD 187 (224)
T ss_dssp HHHHHHHHHHHHHCCHHHHHHHHHHHHCTTCCSEECHHHHHHHHHHHHHHHTTCCCGGGCSSSHHHHHHHHHHHHCTTCS
T ss_pred HHHHHHHHHHHccCCHHHHHHHHHHHHcCCCCCeECHHHHHHHHHHHHHHhcccCCCCCCHhHHHHHHHHHHHHhCCCCC
Confidence 999999999887778888999999999999999999999999987641 1 1234789999999999999
Q ss_pred C
Q 042823 477 Q 477 (477)
Q Consensus 477 G 477 (477)
|
T Consensus 188 G 188 (224)
T 1s1e_A 188 G 188 (224)
T ss_dssp S
T ss_pred C
Confidence 8
|
| >2bec_A Calcineurin B homologous protein 2; calcineurin-homologous protein, calcium-binding protein, NHE1 regulating protein; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.39 E-value=5.2e-13 Score=118.84 Aligned_cols=91 Identities=21% Similarity=0.264 Sum_probs=81.3
Q ss_pred cCChHHHHHHHHHhhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhhhC-----
Q 042823 383 NLPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIYK----- 457 (477)
Q Consensus 383 ~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~~~----- 457 (477)
.++.+++++++++|+.+|.|++|.|+.+||..+ +.+|..++ ++.+++.+|.+++|.|+|+||+.++.....
T Consensus 22 ~ls~~~~~~l~~~F~~~D~d~dG~I~~~El~~~-~~lg~~~~---~~~l~~~~D~d~dg~i~~~EF~~~~~~~~~~~~~~ 97 (202)
T 2bec_A 22 GFSQASLLRLHHRFRALDRNKKGYLSRMDLQQI-GALAVNPL---GDRIIESFFPDGSQRVDFPGFVRVLAHFRPVEDED 97 (202)
T ss_dssp CCCHHHHHHHHHHHHHHCSSCSSCCCHHHHHTC-HHHHHSTT---HHHHHHTTSCSSCCCCCHHHHHHHHGGGSCCCHHH
T ss_pred CCCHHHHHHHHHHHHHHCCCCCCCcCHHHHHHH-HhcCCCcc---HHHHHHHhCCCCCCcCcHHHHHHHHHHhcccchhc
Confidence 467788899999999999999999999999999 88887765 899999999999999999999999976542
Q ss_pred ------------CCcHHHHHHHHHHhccCCCC
Q 042823 458 ------------LETPELLEKAFQYLDKNSDQ 477 (477)
Q Consensus 458 ------------~~~~~~l~~aF~~~D~d~~G 477 (477)
....+.++.+|+.||+|++|
T Consensus 98 ~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~dG 129 (202)
T 2bec_A 98 TETQDPKKPEPLNSRRNKLHYAFQLYDLDRDG 129 (202)
T ss_dssp HC-----CCCCTTSHHHHHHHHHHHHCTTCSS
T ss_pred ccccccccccccccHHHHHHHHHHHhCCCCCC
Confidence 33457899999999999998
|
| >2sas_A Sarcoplasmic calcium-binding protein; 2.40A {Branchiostoma lanceolatum} SCOP: a.39.1.5 | Back alignment and structure |
|---|
Probab=99.39 E-value=9.5e-13 Score=115.05 Aligned_cols=94 Identities=14% Similarity=0.223 Sum_probs=82.5
Q ss_pred CChHHHHHHHHHhhhh-cCCCCCCcCHHHHHHHHHHcC----CCCCHHHHHHH-----------HHHhcCCCCCcccHHH
Q 042823 384 LPTKEKQKLMEKFREM-DTDNSDTLTLSELKAGLAKLG----SALEESEVNQY-----------MEAGDIDGNGNIDSIE 447 (477)
Q Consensus 384 ~~~~~~~~l~~~F~~~-D~~~~G~I~~~el~~~l~~~g----~~~~~~~i~~~-----------~~~~d~~~~g~i~~~e 447 (477)
+++++.++++.+|+.+ |.|++|.|+.+||..++..++ ..++..++..+ ++.+|.|++|.|+|+|
T Consensus 2 ls~~~~~~l~~~F~~~~D~d~dG~i~~~E~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~f~~~D~d~dG~I~~~E 81 (185)
T 2sas_A 2 LNDFQKQKIKFTFDFFLDMNHDGSIQDNDFEDMMTRYKEVNKGSLSDADYKSMQASLEDEWRDLKGRADINKDDVVSWEE 81 (185)
T ss_dssp CCHHHHHHHHHHHHHHTCTTCSSEECHHHHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHHHCTTCSSCEEHHH
T ss_pred cCHHHHHHHHHHHHHheeCCCCCeEcHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEcHHH
Confidence 4567788999999999 999999999999999999988 88999888765 9999999999999999
Q ss_pred HHHHHHhhhCC---------CcHHHHHHHHHHhccCCCC
Q 042823 448 FVNLMTDIYKL---------ETPELLEKAFQYLDKNSDQ 477 (477)
Q Consensus 448 F~~~~~~~~~~---------~~~~~l~~aF~~~D~d~~G 477 (477)
|+.++...... ...+.+..+|+.+|+|+||
T Consensus 82 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~dG 120 (185)
T 2sas_A 82 YLAMWEKTIATCKSVADLPAWCQNRIPFLFKGMDVSGDG 120 (185)
T ss_dssp HHHHHHHHHHTCCSGGGSCTTHHHHHHHHHHHHCTTSSS
T ss_pred HHHHHHHHhccccchhhhhHHHHHHHHHHHHHHcCCCCC
Confidence 99998765322 2347899999999999998
|
| >4eto_A Protein S100-A4; calcium-binding protein, EF-hand, structural genomics, PSI-B protein structure initiative, NEW YORK structural genomics consortium; 1.54A {Homo sapiens} PDB: 1m31_A 2q91_A 3cga_A 3ko0_A* 3m0w_A* | Back alignment and structure |
|---|
Probab=99.39 E-value=1.1e-12 Score=100.50 Aligned_cols=69 Identities=22% Similarity=0.321 Sum_probs=59.9
Q ss_pred HHHHHHHHHhhhhc-CCCC-CCcCHHHHHHHHHH-cC----CCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhh
Q 042823 387 KEKQKLMEKFREMD-TDNS-DTLTLSELKAGLAK-LG----SALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDI 455 (477)
Q Consensus 387 ~~~~~l~~~F~~~D-~~~~-G~I~~~el~~~l~~-~g----~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~ 455 (477)
..+++++++|+.|| +|++ |+|+.+||+.+|+. +| ..+++++++++++.+|.|+||.|+|+||+.++...
T Consensus 7 ~~~~~l~~~F~~fd~~dg~~G~Is~~EL~~~l~~~lg~~l~~~~~~~ev~~~i~~~D~d~DG~Idf~EF~~~~~~~ 82 (93)
T 4eto_A 7 KALDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVFLSCI 82 (93)
T ss_dssp HHHHHHHHHHHHHHTSSSSTTSBCHHHHHHHHHHHCGGGC---CCHHHHHHHHHHHCTTSSSSBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcccCCCCCeECHHHHHHHHHHHhhhhccCCCCHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHH
Confidence 34678999999998 6885 89999999999986 65 45689999999999999999999999999998753
|
| >3sg6_A Gcamp2, myosin light chain kinase, green fluorescent PROT calmodulin chimera; calcium sensor, fluorescent protein; HET: CRO; 1.70A {Gallus gallus} PDB: 3evu_A* 3ek4_A* 3ek7_A* 3evv_A* 3ek8_A* 3ekh_A* 3sg2_A* 3sg3_A* 3sg7_A* 3ekj_A* 3sg4_A* 3sg5_A* 3evr_A* 3o78_A* 3o77_A* 1trf_A | Back alignment and structure |
|---|
Probab=99.39 E-value=1.2e-12 Score=128.59 Aligned_cols=95 Identities=31% Similarity=0.494 Sum_probs=82.0
Q ss_pred cCChHHHHHHHHHhhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhhhC-CCcH
Q 042823 383 NLPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIYK-LETP 461 (477)
Q Consensus 383 ~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~~~-~~~~ 461 (477)
.++.+++++++++|+.+|.|++|.|+.+||+.+|+.+|..++.++++.+++.+|.|++|.|+|+||+.++..... ....
T Consensus 305 ~ls~eei~el~~~F~~fD~D~dG~Is~~EL~~~L~~lg~~~s~eel~~Lf~~~D~DgdG~IsfeEFl~ll~~~~~~~~~~ 384 (450)
T 3sg6_A 305 QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSE 384 (450)
T ss_dssp CCCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHTTCTTSSSSEEHHHHHHHHHC------CH
T ss_pred cCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhccCCCCcccHHHHHHHHHhhccccchh
Confidence 355667789999999999999999999999999999999999999999999999999999999999999876543 4456
Q ss_pred HHHHHHHHHhccCCCC
Q 042823 462 ELLEKAFQYLDKNSDQ 477 (477)
Q Consensus 462 ~~l~~aF~~~D~d~~G 477 (477)
++++.+|+.||+|++|
T Consensus 385 e~l~~aFk~fD~D~dG 400 (450)
T 3sg6_A 385 EEIREAFRVFDKDGNG 400 (450)
T ss_dssp HHHHHHHHHHCTTCSS
T ss_pred hHHHHHHHHhCCCCCC
Confidence 7899999999999998
|
| >1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A | Back alignment and structure |
|---|
Probab=99.39 E-value=2.2e-13 Score=140.52 Aligned_cols=127 Identities=12% Similarity=0.170 Sum_probs=61.5
Q ss_pred HHHHHhhhcCCCCCCCccHHHHHHHHHhhCCCCCHHHHHHHHHHhhccc----hHHHHHhcCCh-HHHHHHHHHhhhhcC
Q 042823 327 ALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNSS----TLESLCENLPT-KEKQKLMEKFREMDT 401 (477)
Q Consensus 327 ~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~----~~~~~~~~~~~-~~~~~l~~~F~~~D~ 401 (477)
.++++|..+|.|++|.|+.+||..+|+.+|..+++.++..+++.+|.++ +|++|...+.. ...++++++|+.||.
T Consensus 12 ~l~~~F~~fD~d~dG~Is~~El~~~l~~lg~~~s~~el~~lf~~~D~d~~G~I~f~EF~~~~~~l~~~~el~~aF~~fD~ 91 (624)
T 1djx_A 12 WIHSCLRKADKNKDNKMNFKELKDFLKELNIQVDDGYARKIFRECDHSQTDSLEDEEIETFYKMLTQRAEIDRAFEEAAG 91 (624)
T ss_dssp --------------------------------------------------------CTTHHHHHHTCCHHHHHHHHHHHT
T ss_pred HHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHHhccHHHHHHHHHHhcC
Confidence 5788999999999999999999999999999999999999999998543 34444332211 012578999999998
Q ss_pred CCCCCcCHHHHHHHHHHc-CCC-CCHHHHHHHHHHhcCC----CCCcccHHHHHHHHHh
Q 042823 402 DNSDTLTLSELKAGLAKL-GSA-LEESEVNQYMEAGDID----GNGNIDSIEFVNLMTD 454 (477)
Q Consensus 402 ~~~G~I~~~el~~~l~~~-g~~-~~~~~i~~~~~~~d~~----~~g~i~~~eF~~~~~~ 454 (477)
+ +|+|+.+||+.+|... |.. ++++++++|++.+|.+ ++|.|+|+||+.+|..
T Consensus 92 ~-~G~Is~~EL~~fL~~~qge~~ls~ee~~~ii~~~d~d~~~~~dG~Is~deF~~~L~s 149 (624)
T 1djx_A 92 S-AETLSVERLVTFLQHQQREEEAGPALALSLIERYEPSETAKAQRQMTKDGFLMYLLS 149 (624)
T ss_dssp T-SSSEEHHHHHHHHHHTSCCSSCSHHHHHHHHHHHCCCHHHHHTTEECHHHHHHHHHS
T ss_pred C-CCeecHHHHHHHHHHHhCCCCCCHHHHHHHHHHhCCChhhccCCCCCHHHHHHHhcC
Confidence 5 9999999999999975 776 9999999999999998 7999999999999875
|
| >3ll8_B Calcineurin subunit B type 1; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 1mf8_B* 2p6b_B 1aui_B 1m63_B* 1tco_B* | Back alignment and structure |
|---|
Probab=99.38 E-value=8.5e-13 Score=111.85 Aligned_cols=88 Identities=28% Similarity=0.454 Sum_probs=77.6
Q ss_pred hHHHHHHHHHhhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhhhC-CCcHHHH
Q 042823 386 TKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIYK-LETPELL 464 (477)
Q Consensus 386 ~~~~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~~~-~~~~~~l 464 (477)
++++++++++|+.+|.|++|.|+.+|| .++..+|..+ ++..+++.+|.+++|.|+|+||+.++..... ....+.+
T Consensus 2 ~~~~~~l~~~F~~~D~d~~G~i~~~el-~~l~~~~~~~---~~~~~~~~~D~~~~g~i~~~ef~~~~~~~~~~~~~~~~~ 77 (155)
T 3ll8_B 2 ADEIKRLGKRFKKLDLDNSGSLSVEEF-MSLPELQQNP---LVQRVIDIFDTDGNGEVDFKEFIEGVSQFSVKGDKEQKL 77 (155)
T ss_dssp CHHHHHHHHHHHHHCTTCSSSBCHHHH-TTSGGGTTCT---THHHHHHHHCTTCSSSBCHHHHHHHHGGGCSSCCHHHHH
T ss_pred HHHHHHHHHHHHHhCcCCCCeEcHHHH-HHhhccccch---HHHHHHHHHCCCCCCcCcHHHHHHHHHHHcccCCHHHHH
Confidence 467889999999999999999999999 6777777655 7899999999999999999999999987544 3456789
Q ss_pred HHHHHHhccCCCC
Q 042823 465 EKAFQYLDKNSDQ 477 (477)
Q Consensus 465 ~~aF~~~D~d~~G 477 (477)
+.+|+.||+|++|
T Consensus 78 ~~~F~~~D~d~~G 90 (155)
T 3ll8_B 78 RFAFRIYDMDKDG 90 (155)
T ss_dssp HHHHHHHCTTCSS
T ss_pred HHHHHHhCCCCCC
Confidence 9999999999998
|
| >2bl0_B Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum} | Back alignment and structure |
|---|
Probab=99.38 E-value=6.3e-13 Score=111.26 Aligned_cols=83 Identities=24% Similarity=0.343 Sum_probs=73.5
Q ss_pred HHHHhhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhhh--CCCcHHHHHHHHH
Q 042823 392 LMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIY--KLETPELLEKAFQ 469 (477)
Q Consensus 392 l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~~--~~~~~~~l~~aF~ 469 (477)
++++|+.+|.|++|.|+.+||..+|+.+|..++..++..++.. +++|.|+|+||+.++.... .....+.++.+|+
T Consensus 7 l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~---~~~g~i~~~eF~~~~~~~~~~~~~~~~~l~~~F~ 83 (145)
T 2bl0_B 7 IQECFQIFDKDNDGKVSIEELGSALRSLGKNPTNAELNTIKGQ---LNAKEFDLATFKTVYRKPIKTPTEQSKEMLDAFR 83 (145)
T ss_dssp HHHHHHHHCTTCSSCEEGGGHHHHHHHTTCCCCHHHHHHHHHH---HTSSEECHHHHHHHHTSCCCCGGGGHHHHHHHHH
T ss_pred HHHHHHHhCCCCcCccCHHHHHHHHHHhCCCCCHHHHHHHHHh---cCCCeEcHHHHHHHHHHHhhcCcccHHHHHHHHH
Confidence 8999999999999999999999999999999999999999987 7889999999999887653 2345678999999
Q ss_pred HhccCCCC
Q 042823 470 YLDKNSDQ 477 (477)
Q Consensus 470 ~~D~d~~G 477 (477)
.||+|++|
T Consensus 84 ~~D~d~~G 91 (145)
T 2bl0_B 84 ALDKEGNG 91 (145)
T ss_dssp HHCSSSSS
T ss_pred HhCCCCCC
Confidence 99999988
|
| >1ggw_A Protein (CDC4P); light chain, cytokinesis, cell cycle, EF-hand; NMR {Schizosaccharomyces pombe} SCOP: a.39.1.5 | Back alignment and structure |
|---|
Probab=99.38 E-value=3.8e-13 Score=112.06 Aligned_cols=85 Identities=16% Similarity=0.264 Sum_probs=75.6
Q ss_pred HHHHHHHhhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhhhCC---CcHHHHH
Q 042823 389 KQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIYKL---ETPELLE 465 (477)
Q Consensus 389 ~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~---~~~~~l~ 465 (477)
+++++++|+.+|.|++|.|+.+||..+|+.+|..++.+++..++. +++|.|+|+||+.++...... ...+.++
T Consensus 4 ~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~----~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~~ 79 (140)
T 1ggw_A 4 DSPYKQAFSLFDRHGTGRIPKTSIGDLLRACGQNPTLAEITEIES----TLPAEVDMEQFLQVLNRPNGFDMPGDPEEFV 79 (140)
T ss_dssp CTTTHHHHHHTCSSSSSEECHHHHHHHHHHTSCCCCHHHHHHHHT----TSCSSEEHHHHHHHHCTTSSSSSSCCHHHHH
T ss_pred HHHHHHHHHHHCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHh----CCCCcCcHHHHHHHHHHHhcccCcccHHHHH
Confidence 356889999999999999999999999999999999999999887 889999999999999765432 2347899
Q ss_pred HHHHHhccCCCC
Q 042823 466 KAFQYLDKNSDQ 477 (477)
Q Consensus 466 ~aF~~~D~d~~G 477 (477)
.+|+.||+|++|
T Consensus 80 ~~F~~~D~d~~G 91 (140)
T 1ggw_A 80 KGFQVFDKDATG 91 (140)
T ss_dssp HHHHTTCSSCSS
T ss_pred HHHHHhCCCCCC
Confidence 999999999998
|
| >2znd_A Programmed cell death protein 6; penta-EF-hand protein, calcium binding protein, apoptosis, calcium, endoplasmic reticulum, membrane, nucleus; 1.70A {Homo sapiens} PDB: 2zn9_A 2zn8_A 1hqv_A 3aak_A 2zne_A 2zrs_A 2zrt_A 3aaj_A | Back alignment and structure |
|---|
Probab=99.37 E-value=7.8e-13 Score=114.42 Aligned_cols=83 Identities=18% Similarity=0.296 Sum_probs=62.5
Q ss_pred HHHHHHHhhhhcCCCCCCcCHHHHHHHHHHcC-CCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhhhCCCcHHHHHHH
Q 042823 389 KQKLMEKFREMDTDNSDTLTLSELKAGLAKLG-SALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIYKLETPELLEKA 467 (477)
Q Consensus 389 ~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g-~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~l~~a 467 (477)
.++++++|+.+|.|++|.|+.+||..+++.+| .++++++++.+++.+|.+++|.|+|+||+.++... ++++.+
T Consensus 6 ~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~ef~~~~~~~------~~~~~~ 79 (172)
T 2znd_A 6 QSFLWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTGVWKYI------TDWQNV 79 (172)
T ss_dssp CHHHHHHHHHHCTTCSSCEEHHHHHHHCCCSSSSCCCHHHHHHHHHHHCSSSSSEECHHHHHHHHHHH------HHHHHH
T ss_pred hhHHHHHHHHhCCCCCCcCcHHHHHHHHHhcCCCCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHH------HHHHHH
Confidence 45677778888888888888888888777777 66777777778888888788888888887776542 467777
Q ss_pred HHHhccCCCC
Q 042823 468 FQYLDKNSDQ 477 (477)
Q Consensus 468 F~~~D~d~~G 477 (477)
|+.||+|++|
T Consensus 80 F~~~D~d~~G 89 (172)
T 2znd_A 80 FRTYDRDNSG 89 (172)
T ss_dssp HHHHCTTCSS
T ss_pred HHHHCCCCCC
Confidence 7777777776
|
| >1j7q_A CAVP, calcium vector protein; EF-hand family, calcium binding protein, metal binding protein; NMR {Branchiostoma lanceolatum} SCOP: a.39.1.5 PDB: 1j7r_A | Back alignment and structure |
|---|
Probab=99.37 E-value=1.5e-12 Score=98.59 Aligned_cols=73 Identities=21% Similarity=0.247 Sum_probs=68.3
Q ss_pred cCChHHHHHHHHHhhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHH---HHHHHHHhcCCCCCcccHHHHHHHHHhhh
Q 042823 383 NLPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESE---VNQYMEAGDIDGNGNIDSIEFVNLMTDIY 456 (477)
Q Consensus 383 ~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~---i~~~~~~~d~~~~g~i~~~eF~~~~~~~~ 456 (477)
.++.++.++++.+|+.||.|++|+|+.+||+.+|+.+|..+++.+ +..++..+|.+++|.|+| ||+.++....
T Consensus 7 ~l~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~d~~~~g~i~~-eF~~~~~~~~ 82 (86)
T 1j7q_A 7 ALGPEEKDECMKIFDIFDRNAENIAPVSDTMDMLTKLGQTYTKRETEAIMKEARGPKGDKKNIGPE-EWLTLCSKWV 82 (86)
T ss_dssp CCSSTHHHHHHHHHHHHSTTTTSCBCHHHHHHHHHHTSCCCSHHHHHHHHHHHHCSSCSSCCBCTT-HHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCCCCCCcCCH-HHHHHHHHHH
Confidence 466778899999999999999999999999999999999999999 999999999999999999 9999987654
|
| >2y5i_A S100Z, S100 calcium binding protein Z; metal-binding protein, EF-hand, calcium regulation, oligomer neuronal development, spine2; 2.03A {Danio rerio} | Back alignment and structure |
|---|
Probab=99.36 E-value=1.7e-12 Score=100.80 Aligned_cols=69 Identities=25% Similarity=0.315 Sum_probs=63.2
Q ss_pred HHHHHHHHHhhhhc-CCCCC-CcCHHHHHHHHHH-----cCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhh
Q 042823 387 KEKQKLMEKFREMD-TDNSD-TLTLSELKAGLAK-----LGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDI 455 (477)
Q Consensus 387 ~~~~~l~~~F~~~D-~~~~G-~I~~~el~~~l~~-----~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~ 455 (477)
+++++++++|+.|| +|++| +|+.+||+.+|+. +|..+++.+++.+++.+|.|+||.|+|+||+.++...
T Consensus 7 ~~~~~l~~~F~~fDd~dg~gG~I~~~El~~~l~~~~~~~lg~~~~~~~v~~l~~~~D~d~dG~I~f~EF~~~~~~~ 82 (99)
T 2y5i_A 7 GAMDALITVFHNYSGSEGDKYKLSKGELKELLNAELTDFLMSQKDPMLVEKIMNDLDSNKDNEVDFNEFVVLVAAL 82 (99)
T ss_dssp HHHHHHHHHHHHHHTSSSSTTEECHHHHHHHHHHHSGGGGTTSCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccCCCcCcCCHHHHHHHHHHHhhhhccccccHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHH
Confidence 35678999999997 89998 9999999999987 7888999999999999999999999999999998754
|
| >2kld_A Polycystin-2; PC2, PKD2, calcium binding domain, EF hand, cytosolic, calcium, coiled coil, disease mutation, glycoprotein, ION transport; NMR {Homo sapiens} PDB: 2kle_A 2kq6_A 2y4q_A | Back alignment and structure |
|---|
Probab=99.36 E-value=6.6e-14 Score=113.69 Aligned_cols=100 Identities=23% Similarity=0.309 Sum_probs=56.2
Q ss_pred HHHhhCCCCCHHHHHHHHHHhhccchHHHHHh-----cC-----ChHHHHHHHHHhhhhcCCCCCCcCHHHHHHHHHHcC
Q 042823 351 GLTKVGSMLTEFDVKHLMEAVKNSSTLESLCE-----NL-----PTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLG 420 (477)
Q Consensus 351 ~l~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~-----~~-----~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g 420 (477)
+|+.+|..+++.++..++..+++..+|.+|+. .+ .....++++++|+.|| |+|+.+||+.+|+.+|
T Consensus 1 ~lr~lG~~~t~~ei~~~~~~~~g~i~f~EF~~~~~~~~~~~~~~~~~~~~~l~~aF~~fD----G~I~~~El~~~l~~lG 76 (123)
T 2kld_A 1 GSTAIGINDTYSEVKSDLAQQKAEMELSDLIRKGYHKALVKLKLKKNTVDDISESLRQGG----GKLNFDELRQDLKGKG 76 (123)
T ss_dssp --------------------------------------------------CCSCSSTTTT----TCEEHHHHHHHTTTCC
T ss_pred ChhhcCCCCCHHHHHHHHHHcCCCccHHHHHhHhHHHHHHHhhcChhHHHHHHHHHHHhC----CCCCHHHHHHHHHHhC
Confidence 35778888888888888887766667777766 33 2234567899999999 9999999999999999
Q ss_pred CCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhhh
Q 042823 421 SALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIY 456 (477)
Q Consensus 421 ~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~~ 456 (477)
. ++++++++++.+|.|++|.|+|+||+.++....
T Consensus 77 ~--t~~ei~~~~~~~D~d~dG~I~~~EF~~~~~~~~ 110 (123)
T 2kld_A 77 H--TDAEIEAIFTKYDQDGDQELTEHEHQQMRDDLE 110 (123)
T ss_dssp S--SHHHHHHHHHHHSSSSCCEECSHHHHHCSCTTT
T ss_pred C--CHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHHH
Confidence 8 999999999999999999999999999886544
|
| >2kyc_A Parvalbumin-3, parvalbumin, thymic CPV3; EF-hand protein, calcium binding protein; NMR {Gallus gallus} PDB: 2kyf_A | Back alignment and structure |
|---|
Probab=99.36 E-value=1.5e-13 Score=109.11 Aligned_cols=96 Identities=25% Similarity=0.355 Sum_probs=80.5
Q ss_pred HHHHHHhhhcCCCCCCCccHHHHHHHHHhhCCCCCHHHHHHHHHHhhccchHHHHHhcCChHHHHHHHHHhhhhcCCCCC
Q 042823 326 QALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNSSTLESLCENLPTKEKQKLMEKFREMDTDNSD 405 (477)
Q Consensus 326 ~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~F~~~D~~~~G 405 (477)
..+.++|..+| ++|.|+++||...+... ....++++.+|+.||.|++|
T Consensus 9 ~e~~~l~~~~d--~~g~i~~~eF~~~~~~~------------------------------~~~~~~l~~~F~~~D~d~~G 56 (108)
T 2kyc_A 9 SDIAAALRDCQ--APDSFSPKKFFQISGMS------------------------------KKSSSQLKEIFRILDNDQSG 56 (108)
T ss_dssp HHHHHHHTTSC--STTTCCHHHHHHHHTCT------------------------------TCCSSSHHHHCSSSCSCCSS
T ss_pred HHHHHHHHHcC--CCCcCCHHHHHHHHhhC------------------------------cccHHHHHHHHHHhCCCCCC
Confidence 45666677777 78889988887655211 11234688999999999999
Q ss_pred CcCHHHHHHHHHHc---CCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHH
Q 042823 406 TLTLSELKAGLAKL---GSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMT 453 (477)
Q Consensus 406 ~I~~~el~~~l~~~---g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~ 453 (477)
+|+.+||+.++..+ |..+++++++.+++.+|.+++|.|+|+||+.++.
T Consensus 57 ~I~~~el~~~l~~~~~~g~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~ 107 (108)
T 2kyc_A 57 FIEEDELKYFLQRFESGARVLTASETKTFLAAADHDGDGKIGAEEFQEMVQ 107 (108)
T ss_dssp CCCGGGTTTSHHHHSSSCCCCCTTTTHHHHTTTCCSSSSCCCSSHHHHHHH
T ss_pred eEcHHHHHHHHHHHhhccCCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHh
Confidence 99999999999998 8889999999999999999999999999999875
|
| >1s6c_A KV4 potassium channel-interacting protein kchip1B; EF-hand, transport protein; 2.00A {Rattus norvegicus} SCOP: a.39.1.5 PDB: 2nz0_A 2i2r_E | Back alignment and structure |
|---|
Probab=99.36 E-value=3.5e-12 Score=111.42 Aligned_cols=132 Identities=20% Similarity=0.273 Sum_probs=98.1
Q ss_pred cHHHHHHHHHhhCCCCCHHHHHHHHHHhhc---cc--hHHHHHh---cCCh--HHHHHHHHHhhhhcCCCCCCcCHHHHH
Q 042823 344 SYDELRAGLTKVGSMLTEFDVKHLMEAVKN---SS--TLESLCE---NLPT--KEKQKLMEKFREMDTDNSDTLTLSELK 413 (477)
Q Consensus 344 ~~~el~~~l~~~~~~~~~~~~~~~~~~~d~---~~--~~~~~~~---~~~~--~~~~~l~~~F~~~D~~~~G~I~~~el~ 413 (477)
+.+++....+..+ ++..++..+++.++. ++ ++.++.. .+.. .....+..+|+.+|.|++|.|+.+||.
T Consensus 2 ~~~el~~l~~~~~--~s~~~i~~l~~~fd~~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~g~i~~~Ef~ 79 (183)
T 1s6c_A 2 RPEGLEQLEAQTN--FTKRELQVLYRGFKNEXPSGVVNEETFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVKFEDFV 79 (183)
T ss_dssp ----CHHHHHHSS--CCHHHHHHHHHHHHHHCTTSEECHHHHHHHHHHHSTTSCCHHHHHHHHHHHCTTCSSCEEHHHHH
T ss_pred ChHHHHHHHHhcC--CCHHHHHHHHHHHHHhCCCCcCCHHHHHHHHHHHcCCCChHHHHHHHHHHhCCCCCCcEeHHHHH
Confidence 4556666666553 477778777777653 22 2333332 2211 235678899999999999999999999
Q ss_pred HHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhhh----C--------CCcHHHHHHHHHHhccCCCC
Q 042823 414 AGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIY----K--------LETPELLEKAFQYLDKNSDQ 477 (477)
Q Consensus 414 ~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~~----~--------~~~~~~l~~aF~~~D~d~~G 477 (477)
.++..++...+++++..+++.+|.+++|.|+++||..++.... . ....+++..+|+.+|+|+||
T Consensus 80 ~~~~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~e~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG 155 (183)
T 1s6c_A 80 TALSILLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDG 155 (183)
T ss_dssp HHHHHHHHCCHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHHHTC-----------CHHHHHHHHHHHCTTCSS
T ss_pred HHHHHHcCCCHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHHHHhccccCcCccHHHHHHHHHHHHHHhCCCCCC
Confidence 9999888788889999999999999999999999999987642 1 11247899999999999998
|
| >1c07_A Protein (epidermal growth factor receptor pathway substrate 15); calcium binding, signaling domain, NPF binding, FW binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6 | Back alignment and structure |
|---|
Probab=99.36 E-value=1.1e-12 Score=101.30 Aligned_cols=69 Identities=20% Similarity=0.211 Sum_probs=64.0
Q ss_pred CChHHHHHHHHHhhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHh
Q 042823 384 LPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTD 454 (477)
Q Consensus 384 ~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~ 454 (477)
++.++.++++++|+.||+|++|+|+.+|++.+|+.+| +++++++++++.+|.|+||.|+|+||+.+|..
T Consensus 4 ls~~~~~~~~~~F~~~D~d~dG~I~~~el~~~l~~~g--~~~~~~~~i~~~~D~d~dG~i~~~EF~~~~~~ 72 (95)
T 1c07_A 4 VSPAEKAKYDEIFLKTDKDMDGFVSGLEVREIFLKTG--LPSTLLAHIWSLCDTKDCGKLSKDQFALAFHL 72 (95)
T ss_dssp SCSHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHTTT--CCHHHHHHHHHHHCTTCSSSEETTTHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHcC--CCHHHHHHHHHHHCCCCCCcCCHHHHHHHHHH
Confidence 4567788999999999999999999999999999987 67899999999999999999999999998864
|
| >1y1x_A Leishmania major homolog of programmed cell death protein; SGPP, structural genomics, PSI; 1.95A {Leishmania major} SCOP: a.39.1.8 | Back alignment and structure |
|---|
Probab=99.35 E-value=2e-12 Score=113.94 Aligned_cols=82 Identities=30% Similarity=0.432 Sum_probs=57.2
Q ss_pred HHHHHHhhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhhhCCCcHHHHHHHHH
Q 042823 390 QKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIYKLETPELLEKAFQ 469 (477)
Q Consensus 390 ~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~l~~aF~ 469 (477)
++++++|+.+|.|++|.|+.+||..++..+|..+++++++.+++.+|.+++|.|+|+||+.++... ++++.+|+
T Consensus 27 ~~l~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~~l~~~~D~d~dG~I~~~EF~~~~~~~------~~~~~~F~ 100 (191)
T 1y1x_A 27 QELMEWFRAVDTDGSGAISVPELNAALSSAGVPFSLATTEKLLHMYDKNHSGEITFDEFKDLHHFI------LSMREGFR 100 (191)
T ss_dssp SCHHHHHHHHCTTCSSSBCHHHHHHHHCBTTBCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHH------HHHHHHHH
T ss_pred HHHHHHHHHHcCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHH------HHHHHHHH
Confidence 456677777777777777777777777666666777777777777777777777777777766532 35666777
Q ss_pred HhccCCCC
Q 042823 470 YLDKNSDQ 477 (477)
Q Consensus 470 ~~D~d~~G 477 (477)
.||+|++|
T Consensus 101 ~~D~d~~G 108 (191)
T 1y1x_A 101 KRDSSGDG 108 (191)
T ss_dssp HHCTTSSS
T ss_pred HhCCCCCC
Confidence 77777666
|
| >3akb_A Putative calcium binding protein; EF-hand, metal binding protein; 1.50A {Streptomyces coelicolor} PDB: 3aka_A | Back alignment and structure |
|---|
Probab=99.35 E-value=1.7e-12 Score=111.24 Aligned_cols=90 Identities=20% Similarity=0.311 Sum_probs=76.0
Q ss_pred HHHHHHHHhhhhcCCCCCCcCHHHHHHHH----HHcCCCCCHHHHHHH-----------HHHhcCCCCCcccHHHHHHHH
Q 042823 388 EKQKLMEKFREMDTDNSDTLTLSELKAGL----AKLGSALEESEVNQY-----------MEAGDIDGNGNIDSIEFVNLM 452 (477)
Q Consensus 388 ~~~~l~~~F~~~D~~~~G~I~~~el~~~l----~~~g~~~~~~~i~~~-----------~~~~d~~~~g~i~~~eF~~~~ 452 (477)
++++++.+|+.+|.|++|.|+.+||..++ +.+|..+++.++..+ ++.+|.+++|.|+|+||+.++
T Consensus 2 ~~~~l~~~F~~~D~d~dG~i~~~E~~~~l~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~f~~~D~d~~g~i~~~ef~~~~ 81 (166)
T 3akb_A 2 YERRIAARFTTFDQDGNGHIDRSDFSGAAKAMLAEFGVAARSDRGQALYGGAEALWQGLAGIADRDGDQRITREEFVTGA 81 (166)
T ss_dssp HHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHHHHHTCCTTSHHHHHHHHHHHHHHHHHHHHHCTTSSSCEEHHHHHHTH
T ss_pred HHHHHHHHHhHHcCCCCCCcCHHHHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHH
Confidence 35789999999999999999999999974 567999999888765 699999999999999999988
Q ss_pred HhhhCCCc-------HHHHHHHHHHhccCCCC
Q 042823 453 TDIYKLET-------PELLEKAFQYLDKNSDQ 477 (477)
Q Consensus 453 ~~~~~~~~-------~~~l~~aF~~~D~d~~G 477 (477)
........ .+.+..+|+.+|+|++|
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G 113 (166)
T 3akb_A 82 VKRLRDKPDRFAEMARPFLHAALGVADTDGDG 113 (166)
T ss_dssp HHHHHHSHHHHHHHHHHHHHHHHHHHCSSSSS
T ss_pred HHHhccCccchHHHHHHHHHHHHHHhCCCCCC
Confidence 76433221 23489999999999998
|
| >1k9u_A Polcalcin PHL P 7; pollen allergen, calcium-binding, EF-hand, cross-reactivity; 1.75A {Phleum pratense} SCOP: a.39.1.10 | Back alignment and structure |
|---|
Probab=99.35 E-value=7.7e-13 Score=98.19 Aligned_cols=65 Identities=32% Similarity=0.523 Sum_probs=61.7
Q ss_pred HHHHHHhhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhh
Q 042823 390 QKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDI 455 (477)
Q Consensus 390 ~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~ 455 (477)
++++.+|+.+|.|++|+|+.+||+.+++.+| .+++++++.+++.+|.+++|.|+|+||+.++...
T Consensus 3 ~~l~~~F~~~D~~~~G~i~~~el~~~l~~~g-~~~~~~~~~~~~~~D~~~dg~i~~~ef~~~~~~~ 67 (78)
T 1k9u_A 3 DDMERIFKRFDTNGDGKISLSELTDALRTLG-STSADEVQRMMAEIDTDGDGFIDFNEFISFCNAN 67 (78)
T ss_dssp CHHHHHHHHHCTTCSSEECHHHHHHHHHHHH-TCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHC
T ss_pred HHHHHHHHHHCCCCCCcCcHHHHHHHHHHhC-CCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHC
Confidence 4688999999999999999999999999999 9999999999999999999999999999998754
|
| >1gjy_A Sorcin, CP-22, V19; calcium binding, calcium-binding, phosphorylation; 2.2A {Chinese hamster} SCOP: a.39.1.8 | Back alignment and structure |
|---|
Probab=99.35 E-value=3e-12 Score=110.19 Aligned_cols=78 Identities=15% Similarity=0.169 Sum_probs=72.5
Q ss_pred HHhhhhcCCCCCCcCHHHHHHHHHHcCC-----CCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhhhCCCcHHHHHHHH
Q 042823 394 EKFREMDTDNSDTLTLSELKAGLAKLGS-----ALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIYKLETPELLEKAF 468 (477)
Q Consensus 394 ~~F~~~D~~~~G~I~~~el~~~l~~~g~-----~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~l~~aF 468 (477)
++|..+|.|++|.|+.+||+.+++.+|. .+++++++.+++.+|.+++|.|+|+||+.++... ++++.+|
T Consensus 5 ~~F~~~D~d~~G~i~~~el~~~l~~lg~~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~eF~~~~~~~------~~~~~~F 78 (167)
T 1gjy_A 5 YGYFASVAGQDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFKELWAVL------NGWRQHF 78 (167)
T ss_dssp HHHHHHHCCTTSCBCHHHHHHHHHHHTCSTTSCCCCHHHHHHHHHHHCTTCCSCBCHHHHHHHHHHH------HHHHHHH
T ss_pred HHHHHHHcCCCCcCCHHHHHHHHHhhcccCCCCCcCHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHH------HHHHHHH
Confidence 4699999999999999999999999987 6899999999999999999999999999988753 5799999
Q ss_pred HHhccCCCC
Q 042823 469 QYLDKNSDQ 477 (477)
Q Consensus 469 ~~~D~d~~G 477 (477)
+.||+|++|
T Consensus 79 ~~~D~d~~G 87 (167)
T 1gjy_A 79 ISFDSDRSG 87 (167)
T ss_dssp HHHCTTCCS
T ss_pred HHhCCCCCC
Confidence 999999998
|
| >1j55_A S-100P protein; metal binding protein; 2.00A {Homo sapiens} SCOP: a.39.1.2 PDB: 1ozo_A | Back alignment and structure |
|---|
Probab=99.35 E-value=1.5e-12 Score=100.45 Aligned_cols=69 Identities=25% Similarity=0.436 Sum_probs=57.3
Q ss_pred HHHHHHHHHhhhhc-CCC-CCCcCHHHHHHHHHH-----cCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhh
Q 042823 387 KEKQKLMEKFREMD-TDN-SDTLTLSELKAGLAK-----LGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDI 455 (477)
Q Consensus 387 ~~~~~l~~~F~~~D-~~~-~G~I~~~el~~~l~~-----~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~ 455 (477)
+++++++++|+.|| +|+ +|+|+.+||+.+|+. +|..+++++++++++.+|.|+||.|+|+||+.++...
T Consensus 6 ~~~~~l~~~F~~fD~~dgd~G~I~~~El~~~l~~~~~~~lg~~~~~~~v~~l~~~~D~d~dG~I~f~EF~~~~~~~ 81 (95)
T 1j55_A 6 TAMGMIIDVFSRYSGSEGSTQTLTKGELKVLMEKELPGFLQSGKDKDAVDKLLKDLDANGDAQVDFSEFIVFVAAI 81 (95)
T ss_dssp HHHHHHHHHHHHHTTSSSCTTEECHHHHHHHHHHHSTTCC------CHHHHHHHHHCSSSSSSEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccCCCCCcCCHHHHHHHHHHHhHhhcccccCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHH
Confidence 45678999999999 798 589999999999987 6777889999999999999999999999999998753
|
| >3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* | Back alignment and structure |
|---|
Probab=99.35 E-value=9.2e-13 Score=133.99 Aligned_cols=99 Identities=34% Similarity=0.506 Sum_probs=86.6
Q ss_pred HHHhcC-ChHHHHHHHHHhhhhcCCCCCCcCHHHHHHHHHHcCC--------CCCHHHHHHHHHHhcCCCCCcccHHHHH
Q 042823 379 SLCENL-PTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGS--------ALEESEVNQYMEAGDIDGNGNIDSIEFV 449 (477)
Q Consensus 379 ~~~~~~-~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~--------~~~~~~i~~~~~~~d~~~~g~i~~~eF~ 449 (477)
.+...+ +.+++++++++|+.||.|++|.|+.+||..+|+.+|. .+++++++++++.+|.|++|.|+|+||+
T Consensus 334 ~ia~~~~~~~~~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~~G~I~~~EF~ 413 (494)
T 3lij_A 334 YMASKLTSQEETKELTDIFRHIDKNGDGQLDRQELIDGYSKLSGEEVAVFDLPQIESEVDAILGAADFDRNGYIDYSEFV 413 (494)
T ss_dssp HHHHHSCCHHHHHHHHHHHHHHCTTCSSEECHHHHHHTTHHHHSSCCCCC--CHHHHHHHHHHHHHCTTCSSSEEHHHHH
T ss_pred HHHHhcccHHHHHHHHHHHHHhCcCCCCeEcHHHHHHHHHHhcccccccccccccHHHHHHHHHHhCCCCCCcCcHHHHH
Confidence 344444 7788999999999999999999999999999999864 5568899999999999999999999999
Q ss_pred HHHHhhhCCCcHHHHHHHHHHhccCCCC
Q 042823 450 NLMTDIYKLETPELLEKAFQYLDKNSDQ 477 (477)
Q Consensus 450 ~~~~~~~~~~~~~~l~~aF~~~D~d~~G 477 (477)
.++........++++..+|+.||+|+||
T Consensus 414 ~~~~~~~~~~~~~~~~~~F~~~D~d~~G 441 (494)
T 3lij_A 414 TVAMDRKSLLSKDKLESAFQKFDQDGNG 441 (494)
T ss_dssp HHHSCHHHHTCHHHHHHHHHHHCTTCSS
T ss_pred HHHHhhhccccHHHHHHHHHHHCCCCCC
Confidence 9987655556678899999999999998
|
| >1tiz_A Calmodulin-related protein, putative; helix-turn-helix, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} SCOP: a.39.1.5 | Back alignment and structure |
|---|
Probab=99.34 E-value=1.6e-12 Score=93.29 Aligned_cols=64 Identities=20% Similarity=0.459 Sum_probs=61.2
Q ss_pred HHHHHhhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHh
Q 042823 391 KLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTD 454 (477)
Q Consensus 391 ~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~ 454 (477)
+++.+|+.+|+|++|.|+.+||+.+++.+|..+++++++.+++.+|.+++|.|+|+||+.++..
T Consensus 2 ~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~D~~~dg~i~~~ef~~~~~~ 65 (67)
T 1tiz_A 2 SAKRVFEKFDKNKDGKLSLDEFREVALAFSPYFTQEDIVKFFEEIDVDGNGELNADEFTSCIEK 65 (67)
T ss_dssp THHHHHHHHCTTSSSCEEHHHHHHHHHHTCTTSCHHHHHHHHHHHCCSSSSEECHHHHHHHHHT
T ss_pred HHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHHH
Confidence 4788999999999999999999999999999999999999999999999999999999998864
|
| >1q80_A SCP, sarcoplasmic calcium-binding protein; all-alpha, metal binding protein; NMR {Neanthes diversicolor} SCOP: a.39.1.5 PDB: 2scp_A | Back alignment and structure |
|---|
Probab=99.34 E-value=1.1e-12 Score=113.56 Aligned_cols=90 Identities=22% Similarity=0.339 Sum_probs=77.6
Q ss_pred hHHHHHHHHHhhhhcCCCCCCcCHHHHHHHHHHcC----CCCCHHH-H--------HHHHHHhcCCCCCcccHHHHHHHH
Q 042823 386 TKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLG----SALEESE-V--------NQYMEAGDIDGNGNIDSIEFVNLM 452 (477)
Q Consensus 386 ~~~~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g----~~~~~~~-i--------~~~~~~~d~~~~g~i~~~eF~~~~ 452 (477)
++++++++.+|+.+|.|++|.|+.+||..+++.+| ..++..+ + +.+++.+| ++|.|+|+||+.++
T Consensus 2 ~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~D--~~g~i~~~EF~~~~ 79 (174)
T 1q80_A 2 DLWVQKMKTYFNRIDFDKDGAITRMDFESMAERFAKESEMKAEHAKVLMDSLTGVWDNFLTAVA--GGKGIDETTFINSM 79 (174)
T ss_dssp HHHHHHHHHHHHHHCTTCSSEESHHHHHHHHHHHHHHSSCCTTHHHHHHHHHHHHHHHTGGGTT--TTSCEEHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCCCCcEeHHHHHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHhcC--CCCeEcHHHHHHHH
Confidence 46678999999999999999999999999999988 8999888 6 45778888 89999999999998
Q ss_pred HhhhCC-----CcHHHHHHHHHHhccCCCC
Q 042823 453 TDIYKL-----ETPELLEKAFQYLDKNSDQ 477 (477)
Q Consensus 453 ~~~~~~-----~~~~~l~~aF~~~D~d~~G 477 (477)
...... ...+.++.+|+.||+|++|
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G 109 (174)
T 1q80_A 80 KEMVKNPEAKSVVEGPLPLFFRAVDTNEDN 109 (174)
T ss_dssp HHHTTSTTCHHHHHTHHHHHHHHHCTTSSS
T ss_pred HHHcCcccHHHHHHHHHHHHHHHhCCCCCC
Confidence 765441 1236799999999999998
|
| >3rm1_A Protein S100-B; alpha-helical, EF hand, metal binding protein-protein bindin; 1.24A {Bos taurus} PDB: 3rlz_A 1cfp_A 3cr2_A 3cr4_X* 3cr5_X* 3gk1_A* 3gk2_A* 3gk4_X* 3iqo_A 3iqq_A 3lle_A* 1psb_A 3czt_X 2h61_A 3d0y_A* 3d10_A* 3hcm_A* 3lk1_A* 3lk0_A* 1b4c_A ... | Back alignment and structure |
|---|
Probab=99.34 E-value=3.7e-12 Score=97.68 Aligned_cols=68 Identities=29% Similarity=0.408 Sum_probs=62.5
Q ss_pred HHHHHHHHHhhhhcCCCCC---CcCHHHHHHHHHH-----cCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhh
Q 042823 387 KEKQKLMEKFREMDTDNSD---TLTLSELKAGLAK-----LGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDI 455 (477)
Q Consensus 387 ~~~~~l~~~F~~~D~~~~G---~I~~~el~~~l~~-----~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~ 455 (477)
..++.++++|+.|| +++| +|+.+||+.+|+. +|..+++++++++++.+|.|+||.|+|+||+.++...
T Consensus 6 ~~~~~l~~~F~~~D-~~dG~~g~Is~~EL~~~l~~~~~~~lg~~~~~~~v~~~~~~~D~d~dG~I~f~EF~~~~~~l 81 (92)
T 3rm1_A 6 KAVVALIDVFHQYS-GREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSNGDGECDFQEFMAFVAMI 81 (92)
T ss_dssp HHHHHHHHHHHHHH-TSSSSTTSBCHHHHHHHHHHHCTTTSCCCCSHHHHHHHHHHHCTTSSSSBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHc-cCCCCcCeECHHHHHHHHHHHhhhhccCcccHHHHHHHHHHHcCCCCCCCcHHHHHHHHHHH
Confidence 34678999999999 7766 9999999999999 9999999999999999999999999999999998753
|
| >1k94_A Grancalcin; penta-EF-hand protein, calcium binding protein, metal binding protein; 1.70A {Homo sapiens} SCOP: a.39.1.8 PDB: 1k95_A 1f4q_A 1f4o_A | Back alignment and structure |
|---|
Probab=99.34 E-value=2.1e-12 Score=110.90 Aligned_cols=78 Identities=14% Similarity=0.204 Sum_probs=72.2
Q ss_pred HHhhhhcCCCCCCcCHHHHHHHHHHcCC-----CCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhhhCCCcHHHHHHHH
Q 042823 394 EKFREMDTDNSDTLTLSELKAGLAKLGS-----ALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIYKLETPELLEKAF 468 (477)
Q Consensus 394 ~~F~~~D~~~~G~I~~~el~~~l~~~g~-----~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~l~~aF 468 (477)
.+|..+|.|++|.|+.+||+.+++.+|. .+++.+++.+++.+|.+++|.|+|+||+.++... ++++.+|
T Consensus 3 ~~F~~~D~d~~G~i~~~el~~~l~~lg~~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~eF~~~~~~~------~~~~~~F 76 (165)
T 1k94_A 3 YTYFSAVAGQDGEVDAEELQRCLTQSGINGTYSPFSLETCRIMIAMLDRDHTGKMGFNAFKELWAAL------NAWKENF 76 (165)
T ss_dssp HHHHHHHHGGGTSBCHHHHHHHHHHHTTTTTSCCCCHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHH------HHHHHHH
T ss_pred HHHHHHhCCCCCcCCHHHHHHHHHHhccccCCCCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHH------HHHHHHH
Confidence 4699999999999999999999999997 6899999999999999999999999999988753 5799999
Q ss_pred HHhccCCCC
Q 042823 469 QYLDKNSDQ 477 (477)
Q Consensus 469 ~~~D~d~~G 477 (477)
+.||+|++|
T Consensus 77 ~~~D~d~~G 85 (165)
T 1k94_A 77 MTVDQDGSG 85 (165)
T ss_dssp HHHCTTCCS
T ss_pred HHhCCCCCc
Confidence 999999998
|
| >2lvv_A Flagellar calcium-binding protein TB-24; EF-hand, metal binding protein; NMR {Trypanosoma brucei brucei} | Back alignment and structure |
|---|
Probab=99.33 E-value=2.8e-13 Score=122.84 Aligned_cols=95 Identities=18% Similarity=0.271 Sum_probs=78.9
Q ss_pred cCChHHHHHHHHHhhhhcCCCCCCcCHHHHHH-HHHHcCCCCCHHHHHHHHHHh---------cCCCCCcccHHHHHHHH
Q 042823 383 NLPTKEKQKLMEKFREMDTDNSDTLTLSELKA-GLAKLGSALEESEVNQYMEAG---------DIDGNGNIDSIEFVNLM 452 (477)
Q Consensus 383 ~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~-~l~~~g~~~~~~~i~~~~~~~---------d~~~~g~i~~~eF~~~~ 452 (477)
.++.+++++++++|..||.|++|.|+.+||.. +++.+|..++..++..++..+ |.+++|.|+|+||+.++
T Consensus 44 ~ls~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~lg~~~~~~~~~~~~~~~f~~~~~~~~D~d~~G~I~~~EF~~~~ 123 (226)
T 2lvv_A 44 DKDAESKSRRIELFKQFDTNGTGKLGFREVLDGCYGILKLDEFTTHLPDIVQRAFDKAKDLGNKVKGVGEEDLVEFLEFR 123 (226)
T ss_dssp SCCHHHHHHHHHHHHHHGGGSCSCBCSHHHHHHHHHTTCCTTTSSSCHHHHHHHHHHHHHHHHHHSCCCCCSCBCHHHHH
T ss_pred hCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHhcccCCCCCCCCcCCHHHHHHHH
Confidence 45778889999999999999999999999998 567789888888888888877 99999999999999964
Q ss_pred HhhhCCCcHHHHHHHHHHhccCCCC
Q 042823 453 TDIYKLETPELLEKAFQYLDKNSDQ 477 (477)
Q Consensus 453 ~~~~~~~~~~~l~~aF~~~D~d~~G 477 (477)
.........+++..+|+.||+|++|
T Consensus 124 ~~~~~~~~~~~l~~~F~~~D~d~dG 148 (226)
T 2lvv_A 124 LMLCYIYDIFELTVMFDTMDKDGSL 148 (226)
T ss_dssp HHHHHHHHHHHHHHHHHHHSCSSCC
T ss_pred HHHHhccCHHHHHHHHHHHcCCCCC
Confidence 3322223356899999999999998
|
| >2qac_A Myosin A tail domain interacting protein MTIP; malaria invasion, structural genomics, PSI, protein structur initiative, structural genomics of pathogenic protozoa CONS SGPP; 1.70A {Plasmodium falciparum} PDB: 2auc_A | Back alignment and structure |
|---|
Probab=99.33 E-value=1.6e-12 Score=109.02 Aligned_cols=87 Identities=15% Similarity=0.151 Sum_probs=78.4
Q ss_pred HHHHHHHHHhhhhcCCC-CCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhhhC-CCcHHHH
Q 042823 387 KEKQKLMEKFREMDTDN-SDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIYK-LETPELL 464 (477)
Q Consensus 387 ~~~~~l~~~F~~~D~~~-~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~~~-~~~~~~l 464 (477)
+++++++.+|..+|.|+ +|.|+.+||..+|+.+|..+++.++..+++.+|.+ |+|+||+.++..... ....+.+
T Consensus 11 ~~~~~l~~~F~~~D~d~~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~d~~----i~~~eF~~~~~~~~~~~~~~~~l 86 (146)
T 2qac_A 11 EEKVDESDVRIYFNEKSSGGKISIDNASYNARKLGLAPSSIDEKKIKELYGDN----LTYEQYLEYLSICVHDKDNVEEL 86 (146)
T ss_dssp HHHSCHHHHHHHHHHHCBTTBEEHHHHHHHHHHTTCCCCHHHHHHHHHHHCSE----ECHHHHHHHHHHTCCTTCCHHHH
T ss_pred HHHHHHHHHHHHhCccCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHhCCC----CCHHHHHHHHHHHhcCcchHHHH
Confidence 34567899999999999 99999999999999999999999999999999977 999999999986443 4557889
Q ss_pred HHHHHHhccCCCC
Q 042823 465 EKAFQYLDKNSDQ 477 (477)
Q Consensus 465 ~~aF~~~D~d~~G 477 (477)
+.+|+.||+|++|
T Consensus 87 ~~~F~~~D~d~~G 99 (146)
T 2qac_A 87 IKMFAHFDNNCTG 99 (146)
T ss_dssp HHHHHTTCTTCSS
T ss_pred HHHHHHhCCCCCC
Confidence 9999999999998
|
| >1eh2_A EPS15; calcium binding, signaling domain, NPF binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6 PDB: 2jxc_A 1f8h_A 1ff1_A | Back alignment and structure |
|---|
Probab=99.33 E-value=4.1e-12 Score=99.64 Aligned_cols=68 Identities=24% Similarity=0.245 Sum_probs=63.3
Q ss_pred CChHHHHHHHHHhhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHh
Q 042823 384 LPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTD 454 (477)
Q Consensus 384 ~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~ 454 (477)
++.+++++++++|+.||+ ++|+|+.+|++.+|+.+| ++++++.++++.+|.|+||.|+|+||+.+|..
T Consensus 9 ls~~e~~~~~~~F~~~D~-~dG~Is~~el~~~l~~~g--l~~~el~~i~~~~D~d~dG~id~~EF~~~m~~ 76 (106)
T 1eh2_A 9 VKPEDKAKYDAIFDSLSP-VNGFLSGDKVKPVLLNSK--LPVDILGRVWELSDIDHDGMLDRDEFAVAMFL 76 (106)
T ss_dssp SCHHHHHHHHHHHTTSCC-SSSCCBHHHHHHHHHTTT--CCHHHHHHHHHHHCSSCSSBCCHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCC-CCCeEcHHHHHHHHHHcC--CCHHHHHHHHHHHcCCCCCcCcHHHHHHHHHH
Confidence 456788899999999999 999999999999999987 77999999999999999999999999998864
|
| >1juo_A Sorcin; calcium-binding proteins, penta-EF-hand, PEF, X-RAY, metal transport; 2.20A {Homo sapiens} SCOP: a.39.1.8 PDB: 2jc2_A | Back alignment and structure |
|---|
Probab=99.33 E-value=1e-12 Score=116.50 Aligned_cols=87 Identities=16% Similarity=0.225 Sum_probs=78.8
Q ss_pred CChHHHHHHHHHhhhhcCCCCCCcCHHHHHHHHHHcCC-----CCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhhhCC
Q 042823 384 LPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGS-----ALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIYKL 458 (477)
Q Consensus 384 ~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~-----~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~ 458 (477)
.+..+++++++ |..+|.|++|.|+.+||+.+|+.+|. .+++++++.+++.+|.+++|.|+|+||+.++...
T Consensus 27 ~~~~~~~~l~~-F~~~D~d~~G~i~~~el~~~l~~lg~~~~~~~~~~~~~~~l~~~~D~d~~g~i~~~eF~~~~~~~--- 102 (198)
T 1juo_A 27 FPGQTQDPLYG-YFAAVAGQDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFKELWAVL--- 102 (198)
T ss_dssp CTTCCCCTTHH-HHHHHHTTTTEECHHHHHHHHHHHTTTCSSCCCCHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHH---
T ss_pred CCccccHHHHH-HHHHhCCCCCcCCHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhCCCCCCeECHHHHHHHHHHH---
Confidence 34456678889 99999999999999999999999986 6899999999999999999999999999988753
Q ss_pred CcHHHHHHHHHHhccCCCC
Q 042823 459 ETPELLEKAFQYLDKNSDQ 477 (477)
Q Consensus 459 ~~~~~l~~aF~~~D~d~~G 477 (477)
++++.+|+.||+|++|
T Consensus 103 ---~~~~~~F~~~D~d~~G 118 (198)
T 1juo_A 103 ---NGWRQHFISFDTDRSG 118 (198)
T ss_dssp ---HHHHHHHHTTCTTCCS
T ss_pred ---HHHHHHHHHhCCCCCC
Confidence 5899999999999998
|
| >2wcb_A Protein S100-A12; calcium signalling, HOST-parasite response, metal binding PR; 1.73A {Homo sapiens} PDB: 1odb_A* 2wc8_A 2wcf_A 2wce_A 1e8a_A 1gqm_A | Back alignment and structure |
|---|
Probab=99.33 E-value=1.1e-12 Score=101.10 Aligned_cols=68 Identities=19% Similarity=0.320 Sum_probs=62.5
Q ss_pred HHHHHHHHHhhhhc-CCCCC-CcCHHHHHHHHHH-----cCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHh
Q 042823 387 KEKQKLMEKFREMD-TDNSD-TLTLSELKAGLAK-----LGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTD 454 (477)
Q Consensus 387 ~~~~~l~~~F~~~D-~~~~G-~I~~~el~~~l~~-----~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~ 454 (477)
+++++++++|+.|| +|++| +|+.+||+.+|+. +|..+++.+++++++.+|.|+||.|+|+||+.++..
T Consensus 9 ~~~~~l~~~F~~fD~~dg~gg~I~~~El~~~l~~~~~~~lg~~~~~~~v~~~~~~~D~d~dG~I~f~EF~~~~~~ 83 (95)
T 2wcb_A 9 EHLEGIVNIFHQYSVRKGHFDTLSKGELKQLLTKELANTIKNIKDKAVIDEIFQGLDANQDEQVDFQEFISLVAI 83 (95)
T ss_dssp HHHHHHHHHHHHHHTSSSSTTEEEHHHHHHHHHHHTHHHHHHCCCHHHHHHHHTTSSSSTTSEEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccCCCCCccCHHHHHHHHHHHhhhhccccccHHHHHHHHHHHcCCCCCcCcHHHHHHHHHH
Confidence 44678999999999 89998 9999999999987 677889999999999999999999999999999875
|
| >2kz2_A Calmodulin, CAM; TR2C, metal binding protein; NMR {Gallus gallus} | Back alignment and structure |
|---|
Probab=99.33 E-value=4.4e-12 Score=97.69 Aligned_cols=67 Identities=33% Similarity=0.629 Sum_probs=63.6
Q ss_pred HHHHHHHHHhhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHH
Q 042823 387 KEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMT 453 (477)
Q Consensus 387 ~~~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~ 453 (477)
...++++++|+.||.|++|+|+.+||+.+|+.+|..+++++++.+++.+|.+++|.|+|+||+.++.
T Consensus 26 ~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~e~~~l~~~~D~d~dG~I~~~EF~~~~~ 92 (94)
T 2kz2_A 26 DSEEEIREAFRVEDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMT 92 (94)
T ss_dssp SCHHHHHHHHHHHCTTCCSCBCHHHHHHHHHHHTCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHCCCCcCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHh
Confidence 4467899999999999999999999999999999999999999999999999999999999999885
|
| >2h2k_A Protein S100-A13; calcium binding protein, metal binding protein; 2.00A {Homo sapiens} PDB: 1yur_A 1yus_A 1yut_A 1yuu_A 2egd_A 2k8m_B 2ki4_B* 2ki6_C* 2kot_A* 2l5x_B 2cxj_A | Back alignment and structure |
|---|
Probab=99.33 E-value=7.2e-13 Score=103.93 Aligned_cols=70 Identities=16% Similarity=0.340 Sum_probs=61.0
Q ss_pred HHHHHHHHHhhhhc-CCCC-CCcCHHHHHHHHHH-cCCCCC-HHHHHHHHHHhcCCCCCcccHHHHHHHHHhhh
Q 042823 387 KEKQKLMEKFREMD-TDNS-DTLTLSELKAGLAK-LGSALE-ESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIY 456 (477)
Q Consensus 387 ~~~~~l~~~F~~~D-~~~~-G~I~~~el~~~l~~-~g~~~~-~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~~ 456 (477)
+++++++++|+.|| +|++ |+|+.+||+.+|+. +|...+ +++++++++.+|.|+||.|+|+||+.++....
T Consensus 19 ~~~~~l~~aF~~fD~~dg~~G~Is~~EL~~~l~~~lg~~~~~~~ev~~li~~~D~d~dG~Idf~EF~~~~~~~~ 92 (106)
T 2h2k_A 19 ESIETVVTTFFTFARQEGRKDSLSVNEFKELVTQQLPHLLKDVGSLDEKMKSLDVNQDSELKFNEYWRLIGELA 92 (106)
T ss_dssp HHHHHHHHHHHHHHTSSSSTTEECHHHHHHHHHHHCTTTTTTCCCHHHHHHHHCTTCSSSEEHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcccCCCCCEECHHHHHHHHHHHcCcCCCCHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHHH
Confidence 34678999999999 7996 79999999999986 776543 47899999999999999999999999987643
|
| >1s6j_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5 | Back alignment and structure |
|---|
Probab=99.33 E-value=2.6e-13 Score=103.12 Aligned_cols=67 Identities=48% Similarity=0.684 Sum_probs=61.6
Q ss_pred hHHHHHHHHHhhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHH
Q 042823 386 TKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLM 452 (477)
Q Consensus 386 ~~~~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~ 452 (477)
.++.+.++.+|+.||+|++|+|+.+||+.+++.+|..+++++++.+++.+|.+++|.|+|+||+.++
T Consensus 19 ~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~ 85 (87)
T 1s6j_A 19 EEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTIDYGEFIAAT 85 (87)
T ss_dssp SSSTTTTTTHHHHHCTTCSSCEEHHHHHHHHHTTTSSCCHHHHHHHHHHHCTTCSSEECHHHHTTCC
T ss_pred HHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHH
Confidence 3344578899999999999999999999999999999999999999999999999999999998754
|
| >2pmy_A RAS and EF-hand domain-containing protein; rasef, calcium-binding domain, structural genomics, structural genomics consortium, SGC; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.31 E-value=2.8e-12 Score=98.26 Aligned_cols=71 Identities=21% Similarity=0.251 Sum_probs=65.1
Q ss_pred cCChHHHHHHHHHhhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhh
Q 042823 383 NLPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDI 455 (477)
Q Consensus 383 ~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~ 455 (477)
.++.++.+.++.+|+.||.|++|.|+.+||+.+|+.+| +++++++.+++.+|.+++|.|+|+||+.++...
T Consensus 20 ~l~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g--~~~~~~~~~~~~~D~d~dg~I~~~EF~~~~~~~ 90 (91)
T 2pmy_A 20 DGDGEELARLRSVFAACDANRSGRLEREEFRALCTELR--VRPADAEAVFQRLDADRDGAITFQEFARGFLGS 90 (91)
T ss_dssp HHHHHHHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHTT--CCHHHHHHHHHHHCTTCSSEECHHHHTHHHHHT
T ss_pred cCCHHHHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHcC--cCHHHHHHHHHHhCCCCCCCEeHHHHHHHHHHH
Confidence 44567788999999999999999999999999999998 789999999999999999999999999988653
|
| >2kgr_A Intersectin-1; structure, alternative splicing, calcium, cell junction, cell projection, coiled coil, endocytosis, membrane, phosphoprotein; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.31 E-value=5.7e-12 Score=100.12 Aligned_cols=69 Identities=25% Similarity=0.344 Sum_probs=63.9
Q ss_pred CChHHHHHHHHHhhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHh
Q 042823 384 LPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTD 454 (477)
Q Consensus 384 ~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~ 454 (477)
++.++.++++++|+.||+|++|+|+.+||+.+|+ |..++++++..+++.+|.|+||.|+|+||+.++..
T Consensus 8 ls~~~~~~l~~~F~~~D~d~dG~I~~~El~~~l~--~~~~~~~~~~~i~~~~D~d~dG~I~~~EF~~~~~~ 76 (111)
T 2kgr_A 8 VPQSSRLKYRQLFNSHDKTMSGHLTGPQARTILM--QSSLPQAQLASIWNLSDIDQDGKLTAEEFILAMHL 76 (111)
T ss_dssp SCHHHHHHHHHHHHTTSCSSCCEEEHHHHHHHHH--TTCCCHHHHHHHHHHHCSSCCSEEEHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHH--hCCCCHHHHHHHHHHHCCCCCCCCcHHHHHHHHHH
Confidence 4567788999999999999999999999999998 67789999999999999999999999999998864
|
| >2jul_A Calsenilin; EF-hand, calcium, LXXLL, DNA binding protein, dimer, alternative splicing, apoptosis, cytoplasm, endoplasmic reticulum, golgi apparatus; NMR {Mus musculus} | Back alignment and structure |
|---|
Probab=99.31 E-value=6.6e-12 Score=116.07 Aligned_cols=135 Identities=19% Similarity=0.254 Sum_probs=100.9
Q ss_pred CCccHHHHHHHHHhhCCCCCHHHHHHHHHHhhc---c--chHHHHHhc---C--ChHHHHHHHHHhhhhcCCCCCCcCHH
Q 042823 341 GTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKN---S--STLESLCEN---L--PTKEKQKLMEKFREMDTDNSDTLTLS 410 (477)
Q Consensus 341 G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~---~--~~~~~~~~~---~--~~~~~~~l~~~F~~~D~~~~G~I~~~ 410 (477)
+.++.+++.+..+.. .+++.++..+++.++. + .++.++... + .......+..+|+.+|.|++|.|+.+
T Consensus 72 ~~l~~e~l~~l~~~~--~~s~~ei~~l~~~fd~~~~~G~I~~~ef~~~l~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~ 149 (256)
T 2jul_A 72 VRHQPEGLDQLQAQT--KFTKKELQSLYRGFKNECPTGLVDEDTFKLIYSQFFPQGDATTYAHFLFNAFDADGNGAIHFE 149 (256)
T ss_dssp ----CTHHHHHHHHT--TSCHHHHHHHHHHHHHHCTTSSEEHHHHHHHHHHHCCSSCCHHHHHHHHHHSSCSCCSEECSH
T ss_pred ccCCHHHHHHHHHHh--CCCHHHHHHHHHHHHhhCCCCcCCHHHHHHHHHHHcccCCcHHHHHHHHHHhccCCCCcCcHH
Confidence 335555666555554 3577777777777653 2 223333322 2 11234578899999999999999999
Q ss_pred HHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhhh------------CCCcHHHHHHHHHHhccCCCC
Q 042823 411 ELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIY------------KLETPELLEKAFQYLDKNSDQ 477 (477)
Q Consensus 411 el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~~------------~~~~~~~l~~aF~~~D~d~~G 477 (477)
||..++..++...+++++..+++.+|.|++|.|+++||..++.... ....++++..+|+.+|+|+||
T Consensus 150 Ef~~~l~~~~~~~~~~~l~~~F~~~D~d~dG~I~~~Ef~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG 228 (256)
T 2jul_A 150 DFVVGLSILLRGTVHEKLKWAFNLYDINKDGCITKEEMLAIMKSIYDMMGRHTYPILREDAPLEHVERFFQKMDRNQDG 228 (256)
T ss_dssp HHHHHHHHHHSCCHHHHHHHHHHHTCCSSSSCBCHHHHHHHHHHHHHHCCCCCSCCSCCCCHHHHHHHHHHHSCCSTTC
T ss_pred HHHHHHHHHhccChHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHHHHhCCCCCcccchhhHHHHHHHHHHHHCCCCCC
Confidence 9999999988888899999999999999999999999999987652 123568899999999999998
|
| >3nxa_A Protein S100-A16; S100 family, calcium binding protein, APO, EF-hand calcium binding proteins, S100 proteins, protein dynamics, binding protein; 2.10A {Homo sapiens} SCOP: a.39.1.0 PDB: 2l0u_A 2l0v_A 2l50_A 2l51_A | Back alignment and structure |
|---|
Probab=99.31 E-value=8.1e-12 Score=96.92 Aligned_cols=70 Identities=20% Similarity=0.276 Sum_probs=60.4
Q ss_pred HHHHHHHHHhhhhcCCC---CCCcCHHHHHHHHHHc-CCCCC----HHHHHHHHHHhcCCCCCcccHHHHHHHHHhhh
Q 042823 387 KEKQKLMEKFREMDTDN---SDTLTLSELKAGLAKL-GSALE----ESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIY 456 (477)
Q Consensus 387 ~~~~~l~~~F~~~D~~~---~G~I~~~el~~~l~~~-g~~~~----~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~~ 456 (477)
..+++++++|+.||.++ +|+|+.+||+.+|+.+ |..++ +++++++++.+|.|+||.|+|+||+.+|....
T Consensus 8 ~~i~~l~~~F~~fD~~~g~~~G~Is~~EL~~~l~~~~~~~l~~~~~~~ev~~~i~~~D~d~DG~Idf~EF~~~m~~~~ 85 (100)
T 3nxa_A 8 KAVIVLVENFYKYVSKYSLVKNKISKSSFREMLQKELNHMLSDTGNRKAADKLIQNLDANHDGRISFDEYWTLIGGIT 85 (100)
T ss_dssp HHHHHHHHHHHHTSCTTCSCTTCBCHHHHHHHHHHHSTTTTCSSHHHHHHHHHHHHSCCCSSCCBCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCcCCCCCCeEcHHHHHHHHHHHccccccccccHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHH
Confidence 34678999999999964 7999999999999874 44443 78999999999999999999999999997644
|
| >3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* | Back alignment and structure |
|---|
Probab=99.30 E-value=1.8e-12 Score=131.46 Aligned_cols=93 Identities=33% Similarity=0.475 Sum_probs=77.8
Q ss_pred ChHHHHHHHHHhhhhcCCCCCCcCHHHH----HHHHHHcCCCCC-------HHHHHHHHHHhcCCCCCcccHHHHHHHHH
Q 042823 385 PTKEKQKLMEKFREMDTDNSDTLTLSEL----KAGLAKLGSALE-------ESEVNQYMEAGDIDGNGNIDSIEFVNLMT 453 (477)
Q Consensus 385 ~~~~~~~l~~~F~~~D~~~~G~I~~~el----~~~l~~~g~~~~-------~~~i~~~~~~~d~~~~g~i~~~eF~~~~~ 453 (477)
+.++.++++++|+.+|.|++|.|+.+|| ..+++.+|..++ +++++++++.+|.|++|.|+|+||+.++.
T Consensus 330 ~~~~~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~D~d~~g~i~~~Ef~~~~~ 409 (484)
T 3nyv_A 330 SQDETKELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAVEHEVDQVLDAVDFDKNGYIEYSEFVTVAM 409 (484)
T ss_dssp HHHHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHC----CGGGCSHHHHHHHHHHHHHHHTCCTTSEEEHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHhCcCCCceEeHHHHHHHHHHHhhhcccccccccccccHHHHHHHHHHhCCCCCCeEeHHHHHHHHH
Confidence 5677889999999999999999999999 555556688888 88999999999999999999999999887
Q ss_pred hhhCCCcHHHHHHHHHHhccCCCC
Q 042823 454 DIYKLETPELLEKAFQYLDKNSDQ 477 (477)
Q Consensus 454 ~~~~~~~~~~l~~aF~~~D~d~~G 477 (477)
.......++++..+|+.||+|+||
T Consensus 410 ~~~~~~~~~~~~~~F~~~D~d~dG 433 (484)
T 3nyv_A 410 DRKTLLSRERLERAFRMFDSDNSG 433 (484)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTCCS
T ss_pred hccccCcHHHHHHHHHHHCCCCCC
Confidence 654445567899999999999998
|
| >2zfd_A Calcineurin B-like protein 2; calcium binding protein, protein-protein complex, ATP-bindin kinase, nucleotide-binding; 1.20A {Arabidopsis thaliana} SCOP: a.39.1.5 PDB: 1uhn_A | Back alignment and structure |
|---|
Probab=99.30 E-value=7.9e-12 Score=113.29 Aligned_cols=94 Identities=17% Similarity=0.224 Sum_probs=81.8
Q ss_pred cCChHHHHHHHHHhhhhcCC--CCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhhhC-CC
Q 042823 383 NLPTKEKQKLMEKFREMDTD--NSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIYK-LE 459 (477)
Q Consensus 383 ~~~~~~~~~l~~~F~~~D~~--~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~~~-~~ 459 (477)
.++.+++++++++|..+|.| ++|.|+.+||..+|+. +....+..++++++.+|.+++|.|+|+||+.++..... ..
T Consensus 41 ~ls~~ei~~l~~~F~~~D~d~~~~G~I~~~El~~~l~~-~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~~~~~~ 119 (226)
T 2zfd_A 41 VFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFK-TNKKESLFADRVFDLFDTKHNGILGFEEFARALSVFHPNAP 119 (226)
T ss_dssp SCCHHHHHHHHHHHHHHHTSSSCSSSBCHHHHHHHHHS-CSSCCCHHHHHHHHHHCSSCSSSBCHHHHHHHHHHTSTTSC
T ss_pred CCCHHHHHHHHHHHHHhCcccCCCCeEcHHHHHHHHhc-cCcccHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHHccCCC
Confidence 46788899999999999999 9999999999999987 43444556888999999999999999999999986653 34
Q ss_pred cHHHHHHHHHHhccCCCC
Q 042823 460 TPELLEKAFQYLDKNSDQ 477 (477)
Q Consensus 460 ~~~~l~~aF~~~D~d~~G 477 (477)
..++++.+|+.||+|++|
T Consensus 120 ~~~~l~~~F~~~D~d~~G 137 (226)
T 2zfd_A 120 IDDKIHFSFQLYDLKQQG 137 (226)
T ss_dssp HHHHHHHHHHHHCTTSSS
T ss_pred HHHHHHHHHHHhCCCCCC
Confidence 567899999999999998
|
| >2ct9_A Calcium-binding protein P22; EF-hand, metal binding protein; 2.20A {Rattus norvegicus} PDB: 2e30_A | Back alignment and structure |
|---|
Probab=99.30 E-value=4.2e-12 Score=113.51 Aligned_cols=91 Identities=15% Similarity=0.268 Sum_probs=77.8
Q ss_pred cCChHHHHHHHHHhhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhhhCC----
Q 042823 383 NLPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIYKL---- 458 (477)
Q Consensus 383 ~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~---- 458 (477)
.++.+++++++.+|..+|.|++|.|+.+||..++ .+|..++. +++++.+|.+++|.|+|+||+.++......
T Consensus 22 ~ls~~~~~~l~~~F~~~D~d~dG~Is~~El~~~~-~lg~~~~~---~~l~~~~d~~~~g~i~~~EF~~~~~~~~~~~~~~ 97 (208)
T 2ct9_A 22 GFSHSQITRLYSRFTSLDKGENGTLSREDFQRIP-ELAINPLG---DRIINAFFSEGEDQVNFRGFMRTLAHFRPIEDNE 97 (208)
T ss_dssp CCCHHHHHHHHHHHHHHCTTCSSEECTGGGGGCH-HHHTSTTH---HHHHHTTSCTTCSCEEHHHHHHHHHTTSCCC---
T ss_pred CCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHH-HcCCCCcH---HHHHHHHcCCCCCcCcHHHHHHHHHhhccccchh
Confidence 4677888999999999999999999999999964 77877764 467888999999999999999999765421
Q ss_pred ------------CcHHHHHHHHHHhccCCCC
Q 042823 459 ------------ETPELLEKAFQYLDKNSDQ 477 (477)
Q Consensus 459 ------------~~~~~l~~aF~~~D~d~~G 477 (477)
...+.++.+|+.||+|++|
T Consensus 98 ~~~~~~~~~~~~~~~~~l~~~F~~~D~d~dG 128 (208)
T 2ct9_A 98 KSKDVNGPEPLNSRSNKLHFAFRLYDLDKDD 128 (208)
T ss_dssp --------CCTTSHHHHHHHHHHHHCTTCSS
T ss_pred hhcccccccccccHHHHHHHHHHHHCCCCCC
Confidence 1567899999999999998
|
| >2b1u_A Calmodulin-like protein 5; CLSP, calmodulin-like SKIN protein, solution structure, backbone dynamic, structural genomics; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.30 E-value=1.9e-12 Score=94.09 Aligned_cols=66 Identities=27% Similarity=0.561 Sum_probs=62.6
Q ss_pred HHHHHHHHhhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHH
Q 042823 388 EKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMT 453 (477)
Q Consensus 388 ~~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~ 453 (477)
..++++.+|+.+|.|++|+|+.+||+.+++.+|..+++++++.+++.+|.+++|.|+|+||+.++.
T Consensus 4 ~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~ 69 (71)
T 2b1u_A 4 GLEDLQVAFRAFDQDGDGHITVDELRRAMAGLGQPLPQEELDAMIREADVDQDGRVNYEEFARMLA 69 (71)
T ss_dssp THHHHHHHHTTSCCSSSSEEEHHHHHHHGGGTTCSSCHHHHHHHHHHCCSSSSSEEETTHHHHHHT
T ss_pred cHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHh
Confidence 356899999999999999999999999999999999999999999999999999999999999875
|
| >1iq3_A Ralbp1-interacting protein (partner of ralbp1); EF-hand domain, POB1 EH domain, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: a.39.1.6 | Back alignment and structure |
|---|
Probab=99.29 E-value=9.3e-13 Score=104.28 Aligned_cols=69 Identities=22% Similarity=0.284 Sum_probs=63.3
Q ss_pred CChHHHHHHHHHhhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHh
Q 042823 384 LPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTD 454 (477)
Q Consensus 384 ~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~ 454 (477)
++.+++++++++|+.||+|++|+|+.+|++.+|+.+| +++++++++++.+|.|+||.|+|+||+.+|..
T Consensus 16 ls~~~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~g--l~~~el~~i~~~~D~d~dG~I~~~EF~~~m~~ 84 (110)
T 1iq3_A 16 ITEEQREYYVNQFRSLQPDPSSFISGSVAKNFFTKSK--LSIPELSYIWELSDADCDGALTLPEFCAAFHL 84 (110)
T ss_dssp CSSSSHHHHHHHHHHHCCSSSSEEEHHHHHHHCCSSS--CSSCCHHHHHHHHCSSSCSEEEHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHcC--CCHHHHHHHHHHHcCCCCCcCcHHHHHHHHHH
Confidence 4567788999999999999999999999999998887 66778999999999999999999999998864
|
| >3cs1_A Flagellar calcium-binding protein; myristoylated, palmitoylated, SEN membrane targeting, EF-hand, cell projection, cilium; 2.00A {Trypanosoma cruzi} | Back alignment and structure |
|---|
Probab=99.29 E-value=7.5e-13 Score=119.43 Aligned_cols=95 Identities=19% Similarity=0.282 Sum_probs=77.2
Q ss_pred cCChHHHHHHHHHhhhhcCCCCCCcCHHHHHHHHHH-cCCCCCHHHHHHHHHHh---------cCCCCCcccHHHHHHHH
Q 042823 383 NLPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAK-LGSALEESEVNQYMEAG---------DIDGNGNIDSIEFVNLM 452 (477)
Q Consensus 383 ~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~l~~-~g~~~~~~~i~~~~~~~---------d~~~~g~i~~~eF~~~~ 452 (477)
.++.+++++++.+|+.||.|++|.|+.+||..+|.. +|..++..++..++..+ +.+++|.|+|+||+.++
T Consensus 41 ~ls~~~~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~I~~~EF~~~~ 120 (219)
T 3cs1_A 41 EKTAEAKQRRIELFKKFDKNETGKLCYDEVYSGCLEVLKLDEFTSRVRDITKRAFDKSRTLGSKLENKGSEDFVEFLEFR 120 (219)
T ss_dssp SSSHHHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHTTCGGGTCSCHHHHHHHHHHHHHHHHHHHHTSCCCSSBCHHHHH
T ss_pred cCCHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHhhhhccCCCCcCCHHHHHHHH
Confidence 456678889999999999999999999999999988 79888877777766533 34788999999999886
Q ss_pred HhhhCCCcHHHHHHHHHHhccCCCC
Q 042823 453 TDIYKLETPELLEKAFQYLDKNSDQ 477 (477)
Q Consensus 453 ~~~~~~~~~~~l~~aF~~~D~d~~G 477 (477)
.........++++.+|+.||+|++|
T Consensus 121 ~~~~~~~~~~~l~~~F~~~D~d~~G 145 (219)
T 3cs1_A 121 LMLCYIYDFFELTVMFDEIDASGNM 145 (219)
T ss_dssp HHHHHHHHHHHHHHHHHTTCSSSSS
T ss_pred HHHhccchHHHHHHHHHHHCCCCCC
Confidence 5433223456899999999999998
|
| >2d58_A Allograft inflammatory factor 1; EF-hand, metal binding protein; 1.90A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.28 E-value=1.2e-11 Score=97.86 Aligned_cols=70 Identities=19% Similarity=0.295 Sum_probs=66.1
Q ss_pred hHHHHHHHHHhhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhh
Q 042823 386 TKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDI 455 (477)
Q Consensus 386 ~~~~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~ 455 (477)
.++.++++.+|+.||.|++|+|+.+||+.+++.+|..++++++..++..+|.+++|.|+|+||+.++...
T Consensus 28 ~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~l~~~~D~d~dg~i~~~eF~~~~~~~ 97 (107)
T 2d58_A 28 PSKLEGFKEKYMEFDLNGNGDIDIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSGETFSYPDFLRMMLGK 97 (107)
T ss_dssp HHHHHHHHHHHTTSCCCTTSCEEHHHHHHHHHHTTCCCCHHHHHHHHHHHCSSSSSEECHHHHHHHHSSS
T ss_pred HHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHc
Confidence 5667899999999999999999999999999999999999999999999999999999999999998653
|
| >1qjt_A EH1, epidermal growth factor receptor substrate substrate 15, EPS15; EH domain, EF-hand, solution structure, S100 protein; NMR {Mus musculus} SCOP: a.39.1.6 | Back alignment and structure |
|---|
Probab=99.28 E-value=2.8e-12 Score=99.59 Aligned_cols=65 Identities=20% Similarity=0.294 Sum_probs=60.5
Q ss_pred HHHHHHHHhhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHh
Q 042823 388 EKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTD 454 (477)
Q Consensus 388 ~~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~ 454 (477)
+.++++++|+.||+|++|+|+.+|++.+|+.+| ++++++.++++.+|.|+||.|+|+||+.+|..
T Consensus 9 ~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~~--l~~~~l~~i~~~~D~d~dG~i~~~EF~~~~~~ 73 (99)
T 1qjt_A 9 GNPVYEKYYRQVEAGNTGRVLALDAAAFLKKSG--LPDLILGKIWDLADTDGKGVLSKQEFFVALRL 73 (99)
T ss_dssp TCTHHHHHHHHHCCTTSSCCCSHHHHHHHHTSS--SCHHHHHHHHHHHCCSSSSSCCSHHHHHHHHH
T ss_pred hHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHcC--CCHHHHHHHHHHHCCCCCCcCCHHHHHHHHHH
Confidence 356899999999999999999999999999987 67999999999999999999999999999864
|
| >1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6 | Back alignment and structure |
|---|
Probab=99.27 E-value=9.1e-12 Score=115.34 Aligned_cols=137 Identities=12% Similarity=0.098 Sum_probs=98.4
Q ss_pred cccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCC-eeEEEEEEEeCCeEE
Q 042823 22 MLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPN-VVEFKSTYEDETAVH 100 (477)
Q Consensus 22 ~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpn-iv~~~~~~~~~~~~~ 100 (477)
...|.+....+.|..+.||++.. .+|..+++|+.... ....+.+|+.++..+..++- +++++.+....+..|
T Consensus 19 ~~~~~~~~~~~gg~~~~v~~~~~-~~g~~~vlK~~~~~------~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~ 91 (264)
T 1nd4_A 19 LFGYDWAQQTIGCSDAAVFRLSA-QGRPVLFVKTDLSG------ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDW 91 (264)
T ss_dssp TTTCEEEECSCTTSSCEEEEEEC-TTSCCEEEEEECSC------TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEE
T ss_pred cCCCceEecccCCCCceEEEEec-CCCCeEEEEeCCcc------cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCE
Confidence 34566644445666799999864 45778999986532 11346788888888865532 677899888888899
Q ss_pred EEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcC------------------------------------
Q 042823 101 VVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMG------------------------------------ 144 (477)
Q Consensus 101 lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~------------------------------------ 144 (477)
+||||++|.+|. . ...+ ...++.++...|..||+..
T Consensus 92 ~v~e~i~G~~l~--~---~~~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (264)
T 1nd4_A 92 LLLGEVPGQDLL--S---SHLA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQ 163 (264)
T ss_dssp EEEECCSSEETT--T---SCCC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGT
T ss_pred EEEEecCCcccC--c---CcCC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhcc
Confidence 999999998883 1 1112 2356677777777777643
Q ss_pred ----------------------CeeccCCCCceeeeecCCCCCEEEeecCCccc
Q 042823 145 ----------------------VMHRDLKPENFSFISRDDNALLKVTDFGSALL 176 (477)
Q Consensus 145 ----------------------ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~ 176 (477)
++|||++|.||++ ++...+.|+|||.+..
T Consensus 164 ~~~~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~---~~~~~~~liD~~~a~~ 214 (264)
T 1nd4_A 164 GLAPAELFARLKARMPDGEDLVVTHGDACLPNIMV---ENGRFSGFIDCGRLGV 214 (264)
T ss_dssp TCCHHHHHHHHHHTCCSSCCEEEECSSCCGGGEEE---ETTEEEEECCCTTCEE
T ss_pred CccHHHHHHHHHHhcCCCCCeEEECCCCCCCcEEE---ECCcEEEEEcchhccc
Confidence 9999999999998 4445567999998753
|
| >2kax_A Protein S100-A5; EF-hand, calcium binding protien, calcium, polymorphism, structural genomics, spine2, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 2kay_A | Back alignment and structure |
|---|
Probab=99.26 E-value=5.6e-12 Score=96.63 Aligned_cols=68 Identities=28% Similarity=0.448 Sum_probs=61.3
Q ss_pred HHHHHHHHHhhhhc-CCCCC-CcCHHHHHHHHHH---cCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhh
Q 042823 387 KEKQKLMEKFREMD-TDNSD-TLTLSELKAGLAK---LGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDI 455 (477)
Q Consensus 387 ~~~~~l~~~F~~~D-~~~~G-~I~~~el~~~l~~---~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~ 455 (477)
+.+++++++|+.|| +|++| +|+.+||+.+|+. +|. +++.+++.+++.+|.|+||.|+|+||+.++...
T Consensus 7 ~~~~~l~~~F~~~D~~d~dG~~I~~~El~~~l~~~~~~~~-~~~~~i~~~~~~~D~d~dG~I~f~EF~~~~~~~ 79 (92)
T 2kax_A 7 KALTTMVTTFHKYSGREGSKLTLSRKELKELIKKELCLGE-MKESSIDDLMKSLDKNSDQEIDFKEYSVFLTML 79 (92)
T ss_dssp HHHHHHHHHHHHHHTTSSCSSEEEHHHHHHHHHHHSCCTT-TCCTTHHHHHHHHTTTCSSEEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhCCCCCeeCHHHHHHHHHHHcCCCC-CCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence 34678999999999 99999 9999999999987 335 888899999999999999999999999998753
|
| >1dgu_A Calcium-saturated CIB; helical, EF-hands, blood clotting; NMR {Homo sapiens} SCOP: a.39.1.5 PDB: 1dgv_A 1xo5_A 1y1a_A* | Back alignment and structure |
|---|
Probab=99.26 E-value=1.5e-11 Score=107.49 Aligned_cols=91 Identities=14% Similarity=0.152 Sum_probs=79.4
Q ss_pred cCChHHHHHHHHHhhhhcC-----CC-C--CCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCc-ccHHHHHHHHH
Q 042823 383 NLPTKEKQKLMEKFREMDT-----DN-S--DTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGN-IDSIEFVNLMT 453 (477)
Q Consensus 383 ~~~~~~~~~l~~~F~~~D~-----~~-~--G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~-i~~~eF~~~~~ 453 (477)
.++.+++..++++|..+|. |+ + |.|+.+||.. |+.+|..++.. ++++.+|.+++|. |+|+||+.++.
T Consensus 13 ~ls~~~~~~l~~~F~~~D~~~~~~~~~~~~G~i~~~el~~-l~~~g~~~~~~---~l~~~~D~d~~G~~I~~~EF~~~~~ 88 (183)
T 1dgu_A 13 FLTKQEILLAHRRFCELLPQEQRSVESSLRAQVPFEQILS-LPELKANPFKE---RICRVFSTSPAKDSLSFEDFLDLLS 88 (183)
T ss_dssp SCCHHHHHHHHHHHHHHSCSTTCSSCCCTTTCSCHHHHHT-STTSSSCTTHH---HHHHHHSCSSSSCCCCHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHhCccccccccccccCcCcHHHHHH-HHhhhcCcHHH---HHHHHhCCCCCCCEecHHHHHHHHH
Confidence 4677888999999999999 68 8 9999999999 99999988765 5677789999999 99999999998
Q ss_pred hhhCC-CcHHHHHHHHHHhccCCCC
Q 042823 454 DIYKL-ETPELLEKAFQYLDKNSDQ 477 (477)
Q Consensus 454 ~~~~~-~~~~~l~~aF~~~D~d~~G 477 (477)
..... ..++.++.+|+.||+|++|
T Consensus 89 ~~~~~~~~~~~l~~~F~~~D~d~~G 113 (183)
T 1dgu_A 89 VFSDTATPDIKSHYAFRIFDFDDDG 113 (183)
T ss_dssp HHSTTCCHHHHHHHHHHHHCTTCSS
T ss_pred HhcCCCCHHHHHHHHHHHhCCCCCC
Confidence 66543 3356899999999999998
|
| >1yx7_A Calsensin, LAN3-6 antigen; calcium-binding protein EF-hand, helix-loop- helix, nervous system, metal binding protein; NMR {Haemopis marmorata} PDB: 1yx8_A | Back alignment and structure |
|---|
Probab=99.25 E-value=3.5e-12 Score=95.79 Aligned_cols=71 Identities=25% Similarity=0.443 Sum_probs=64.0
Q ss_pred hHHHHHHHHHhhhhcCCCCCCcCHHHHHHHHHHcC--CCCCHHHHHH----HHHHhcCCCCCcccHHHHHHHHHhhh
Q 042823 386 TKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLG--SALEESEVNQ----YMEAGDIDGNGNIDSIEFVNLMTDIY 456 (477)
Q Consensus 386 ~~~~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g--~~~~~~~i~~----~~~~~d~~~~g~i~~~eF~~~~~~~~ 456 (477)
....++++.+|+.||.|++|+|+.+||+.+++.+| ..+++++++. +++.+|.+++|.|+|+||+..+....
T Consensus 3 ~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~~~~~~D~~~dg~I~~~eF~~~~~~~~ 79 (83)
T 1yx7_A 3 CKVKAELEAAFKKLDANGDGYVTALELQTFMVTLDAYKALSKDKVKEASAKLIKMADKNSDGKISKEEFLNANAELL 79 (83)
T ss_dssp SCSCTHHHHHHHHHSSSCSSSCSHHHHHHHHHHHTTCTTTTTTTTHHHHHHHHTTTCSSSCSCCSHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHHccccCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHhhHHHH
Confidence 34456899999999999999999999999999999 8899999999 99999999999999999998776543
|
| >1c7v_A CAVP, calcium vector protein; EF-hand family, calcium binding protein, metal binding protein; NMR {Branchiostoma lanceolatum} SCOP: a.39.1.5 PDB: 1c7w_A | Back alignment and structure |
|---|
Probab=99.24 E-value=4.6e-12 Score=94.69 Aligned_cols=68 Identities=32% Similarity=0.556 Sum_probs=63.2
Q ss_pred HHHHHHHHHhhhhcCCCCCCcCHHHHHHHHHHcC-CCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhh
Q 042823 387 KEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLG-SALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDI 455 (477)
Q Consensus 387 ~~~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g-~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~ 455 (477)
...++++ +|+.||.|++|+|+.+||+.+++.+| ..+++++++.+++.+|.+++|.|+|+||+.++...
T Consensus 6 ~~~~~l~-~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~~ 74 (81)
T 1c7v_A 6 DEEEILR-AFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNGVIDIPEFMDLIKKS 74 (81)
T ss_dssp -CHHHHH-HHHHHSCSGGGEECHHHHHHHSSTTTTCCCCHHHHHHHHHHHCSSGGGSEEHHHHHHHHHCC
T ss_pred cHHHHHH-HHHHHCCCCCCcCCHHHHHHHHHHhCCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHhh
Confidence 3457899 99999999999999999999999999 99999999999999999999999999999998753
|
| >3li6_A Calcium-binding protein; calcium signaling protein, assemble free energy, dynamic behaviour, cytoskeleton, metal binding; 2.50A {Entamoeba histolytica} | Back alignment and structure |
|---|
Probab=99.24 E-value=2.6e-12 Score=91.86 Aligned_cols=63 Identities=27% Similarity=0.405 Sum_probs=59.2
Q ss_pred HHHHhhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHh
Q 042823 392 LMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTD 454 (477)
Q Consensus 392 l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~ 454 (477)
++.+|+.+|.|++|.|+.+||+.+++.+|..+++++++.+++.+|.+++|.|+|+||+.++..
T Consensus 2 l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~ef~~~~~~ 64 (66)
T 3li6_A 2 AEALFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYGS 64 (66)
T ss_dssp CCHHHHHHCTTCSSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCSSSCCHHHHHHHHTC
T ss_pred HHHHHHHHCCCCCCcccHHHHHHHHHHccCCCcHHHHHHHHHHHCCCCCCCCCHHHHHHHHHh
Confidence 357899999999999999999999999999999999999999999999999999999998864
|
| >1sjj_A Actinin; 3-helix bundle, calponin homology domain, calmodulin-like domain, actin binding protein, contractIle protein; 20.00A {Gallus gallus} SCOP: i.15.1.1 | Back alignment and structure |
|---|
Probab=99.24 E-value=2e-11 Score=132.56 Aligned_cols=131 Identities=17% Similarity=0.335 Sum_probs=111.7
Q ss_pred hhccCCchhhHHHHHHhhhcCCCCCCCccHHHHHHHHHhhCCCCCHHHHHHHHHHhhccc----hHHHHHhcCCh-----
Q 042823 316 IVEYLPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNSS----TLESLCENLPT----- 386 (477)
Q Consensus 316 i~~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~----~~~~~~~~~~~----- 386 (477)
....++......+...|..+|.|++|.|+.+||..+++.+|..+++.++..++..+|.++ +|.+|+..+..
T Consensus 715 ~~~~l~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~~~~~~D~d~dG~I~~~EF~~~~~~~~~~~ 794 (863)
T 1sjj_A 715 DAKGISQEQMNEFRASFNHFDRKKTGMMDCEDFRACLISMGYNMGEAEFARIMSIVDPNRMGVVTFQAFIDFMSRETADT 794 (863)
T ss_dssp CCCCSSHHHHHHHHHHHTTTCSSSSSEEESTTHHHHHHHHTCCCCTHHHHHHHHHHCTTSCSEEETTHHHHTHHHHSTTC
T ss_pred hccCCCHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhcCC
Confidence 345567778889999999999999999999999999999999999999999999997543 46666654422
Q ss_pred HHHHHHHHHhhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCC-----CCCcccHHHHHHHHHh
Q 042823 387 KEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDID-----GNGNIDSIEFVNLMTD 454 (477)
Q Consensus 387 ~~~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~-----~~g~i~~~eF~~~~~~ 454 (477)
...+.++.+|+.| .|++|+|+.+||+.+|. +++++.++..+|.+ +||.|+|+||+.++..
T Consensus 795 ~~~~~l~~aF~~~-~d~~G~Is~~El~~~l~-------~~~~~~l~~~~d~~~~~~~~dg~I~~~eF~~~~~~ 859 (863)
T 1sjj_A 795 DTADQVMASFKIL-AGDKNYITVDELRRELP-------PDQAEYCIARMAPYNGRDAVPGALDYMSFSTALYG 859 (863)
T ss_dssp SSSHHHHHHHHGG-GTSSSEEEHHHHHHHSC-------HHHHHHHHHHSEECCSSCCCTTEEESHHHHHHHSC
T ss_pred CCHHHHHHHHHHH-hCCCCcCcHHHHHHHCC-------HHHHHHHHHHcchhcCCCCCCCceeHHHHHHHHhc
Confidence 1235789999999 89999999999999873 78899999999986 6999999999998864
|
| >2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B | Back alignment and structure |
|---|
Probab=99.24 E-value=7e-12 Score=132.39 Aligned_cols=127 Identities=10% Similarity=0.114 Sum_probs=89.0
Q ss_pred hhHHHHHHhh--hcCCCCCCCccHHHHHHHHHhhCCCCCHHHHHHHHHHhhc-------c----chHHHHHhcCChH-HH
Q 042823 324 ETQALKEKFI--EMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKN-------S----STLESLCENLPTK-EK 389 (477)
Q Consensus 324 ~~~~l~~~F~--~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~-------~----~~~~~~~~~~~~~-~~ 389 (477)
....+++.|. .+|.|++|+|+.+||..+|+. .+.+++++++++|. + .+|++|...+... ..
T Consensus 144 ~~~~Lk~~F~~~~fD~d~dG~Is~~EL~~~l~~-----~~~ev~~li~~~d~~~~~~D~d~~g~idf~EF~~~~~~l~~r 218 (799)
T 2zkm_X 144 RSTFLDKILVKLKMQLNSEGKIPVKNFFQMFPA-----DRKRVEAALSACHLPKGKNDAINPEDFPEPVYKSFLMSLCPR 218 (799)
T ss_dssp HHHHHHHHHHHHHHSCCTTSCEEHHHHHHHSCS-----CHHHHHHHHHHTTCCCCTTCEECGGGCCHHHHHHHHHHHSCC
T ss_pred HHHHHHHHhHHhccCCCCCCeECHHHHHHHHhh-----hHHHHHHHHHHhCcCccccccCCCCcCCHHHHHHHHHHccCH
Confidence 4556888999 899999999999999988765 47899999999872 1 2466665533211 13
Q ss_pred HHHHHHhhhhcCCCCCCcCHHHHHHHHHHc-CCC---------CCHHHHHHHHHHhcCC----CCCcccHHHHHHHHHhh
Q 042823 390 QKLMEKFREMDTDNSDTLTLSELKAGLAKL-GSA---------LEESEVNQYMEAGDID----GNGNIDSIEFVNLMTDI 455 (477)
Q Consensus 390 ~~l~~~F~~~D~~~~G~I~~~el~~~l~~~-g~~---------~~~~~i~~~~~~~d~~----~~g~i~~~eF~~~~~~~ 455 (477)
++++++|+.||.+++|+||.+||+.+|+.+ |.. ++++++++||+++|.+ ++|.|+|+||+.+|...
T Consensus 219 ~el~~aF~~fD~d~~g~Is~~eL~~fL~~~Qge~~~~~~~~~~~t~ee~~~iI~~~d~d~~~~~dg~is~eeF~~~L~S~ 298 (799)
T 2zkm_X 219 PEIDEIFTSYHAKAKPYMTKEHLTKFINQKQRDSRLNSLLFPPARPDQVQGLIDKYEPSGINAQRGQLSPEGMVWFLCGP 298 (799)
T ss_dssp HHHHTTCC--------CCCHHHHHHHHHHTCC---------------CHHHHHHHHCCC--------CCHHHHHHHHHST
T ss_pred HHHHHHHHHhccCCCCeEcHHHHHHHHHHhcCCcccccccccCCCHHHHHHHHHHhhcccccccCCccchhhhhhcccCc
Confidence 578999999999999999999999999997 676 7889999999999998 89999999999999753
|
| >1k2h_A S100A1, S-100 protein, alpha chain; non-covalent homodimer, X-type four-helix bundle, metal binding protein; NMR {Rattus norvegicus} SCOP: a.39.1.2 PDB: 1zfs_A 2k2f_A 2kbm_A 2l0p_A 2jpt_A | Back alignment and structure |
|---|
Probab=99.24 E-value=1.5e-11 Score=94.58 Aligned_cols=68 Identities=26% Similarity=0.411 Sum_probs=63.8
Q ss_pred HHHHHHHHHhhhhc-CCCCC-CcCHHHHHHHHHH-----cCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHh
Q 042823 387 KEKQKLMEKFREMD-TDNSD-TLTLSELKAGLAK-----LGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTD 454 (477)
Q Consensus 387 ~~~~~l~~~F~~~D-~~~~G-~I~~~el~~~l~~-----~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~ 454 (477)
...++++.+|+.|| +|++| .|+.+||+.+++. +|..+++++++.+++.+|.+++|.|+|+||+.++..
T Consensus 6 ~~~~~l~~~F~~~D~~d~~G~~I~~~el~~~l~~~~~~~~g~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~ 80 (93)
T 1k2h_A 6 TAMETLINVFHAHSGKEGDKYKLSKKELKDLLQTELSSFLDVQKDADAVDKIMKELDENGDGEVDFQEFVVLVAA 80 (93)
T ss_dssp HHHHHHHHHHHHHHTTSSCCSSCCHHHHHHHHHHHTHHHHHCCCCHHHHHHHHHHHHHCTTSCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcccCCCcCccCHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence 34678999999999 79999 9999999999998 999999999999999999999999999999999875
|
| >1qx2_A Vitamin D-dependent calcium-binding protein, INTE; EF-hand (helix-loop-helix) calcium binding protein, four-HEL domain, protein engineering; HET: FME; 1.44A {Bos taurus} SCOP: a.39.1.1 PDB: 1kcy_A 1kqv_A 1ksm_A 1n65_A 1ht9_A 4icb_A 1cdn_A 1clb_A 2bca_A 1ig5_A 1igv_A 3icb_A 1d1o_A 1b1g_A 2bcb_A 1boc_A 1bod_A | Back alignment and structure |
|---|
Probab=99.24 E-value=7.2e-12 Score=92.26 Aligned_cols=67 Identities=24% Similarity=0.456 Sum_probs=62.9
Q ss_pred HHHHHHHhhhh-cCCCC-CCcCHHHHHHHHHHcCCCC--CHHHHHHHHHHhcCCCCCcccHHHHHHHHHhh
Q 042823 389 KQKLMEKFREM-DTDNS-DTLTLSELKAGLAKLGSAL--EESEVNQYMEAGDIDGNGNIDSIEFVNLMTDI 455 (477)
Q Consensus 389 ~~~l~~~F~~~-D~~~~-G~I~~~el~~~l~~~g~~~--~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~ 455 (477)
.++++.+|+.| |+|++ |+|+.+||+.+|+.+|..+ ++++++.+++.+|.+++|.|+|+||+.++...
T Consensus 4 ~~~l~~~F~~~~D~d~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~l~~~~D~~~~g~i~~~eF~~~~~~~ 74 (76)
T 1qx2_A 4 PEEIKGAFEVFAAKEGDPNQISKEELKLVMQTLGPSLLKGMSTLDEMIEEVDKNGDGEVSFEEFLVMMKKI 74 (76)
T ss_dssp HHHHHHHHHHHHTSSSCTTSEEHHHHHHHHHHHGGGSCTTSCSHHHHHHHHCTTCSSEECHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcccCCCcCeECHHHHHHHHHHhCCCcCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHh
Confidence 46789999999 99999 9999999999999999988 99999999999999999999999999988753
|
| >3a8r_A Putative uncharacterized protein; EF-hand, membrane, oxidoreductase, transmembrane, calcium BI protein; 2.40A {Oryza sativa japonica group} | Back alignment and structure |
|---|
Probab=99.23 E-value=1.7e-11 Score=106.72 Aligned_cols=93 Identities=13% Similarity=0.128 Sum_probs=77.3
Q ss_pred HHhcCChHHHHHHHHHhhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhc---CCCCCcccHHHHHHHHHhhh
Q 042823 380 LCENLPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGD---IDGNGNIDSIEFVNLMTDIY 456 (477)
Q Consensus 380 ~~~~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d---~~~~g~i~~~eF~~~~~~~~ 456 (477)
+.......++.+++++|+.|| ++|.|+.+||..++ |..+++.++..+++.+| .+++|.|+|+||+.++....
T Consensus 18 ~~~~~~~~~~~~~~~~F~~~D--~dG~I~~~el~~~l---g~~~~~~~~~~i~~~~d~~~~~~~~~i~~~ef~~~~~~~~ 92 (179)
T 3a8r_A 18 VTAKVGNDGWAAVEKRFNQLQ--VDGVLLRSRFGKCI---GMDGSDEFAVQMFDSLARKRGIVKQVLTKDELKDFYEQLT 92 (179)
T ss_dssp HHHHHCCCCHHHHHHHHHHHC--BTTBEEGGGHHHHH---TCCSCHHHHHHHHHHHHHHHTCCSSEECHHHHHHHHHHHH
T ss_pred HHhccchhhHHHHHHHHhccC--CCCCCcHHHHHHHH---CCCCcHHHHHHHHHHHHHhccCCCCCcCHHHHHHHHHHHc
Confidence 333333355778999999999 89999999999864 88889889999998887 46789999999999887655
Q ss_pred CCCcHHHHHHHHHHhccCCCC
Q 042823 457 KLETPELLEKAFQYLDKNSDQ 477 (477)
Q Consensus 457 ~~~~~~~l~~aF~~~D~d~~G 477 (477)
.....++++.+|+.||+||||
T Consensus 93 ~~~~~~~l~~~F~~~D~d~dG 113 (179)
T 3a8r_A 93 DQGFDNRLRTFFDMVDKNADG 113 (179)
T ss_dssp CCCHHHHHHHHHHHHCTTCSS
T ss_pred CCCHHHHHHHHHHHHCCCCCC
Confidence 455678999999999999998
|
| >1wlz_A DJBP, CAP-binding protein complex interacting protein 1 isoform A; EF-hand like, unknown function; 1.60A {Homo sapiens} SCOP: a.39.1.7 | Back alignment and structure |
|---|
Probab=99.23 E-value=1.7e-11 Score=96.61 Aligned_cols=67 Identities=13% Similarity=0.313 Sum_probs=63.1
Q ss_pred HHHHHHHHhhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHh
Q 042823 388 EKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTD 454 (477)
Q Consensus 388 ~~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~ 454 (477)
..++++.+|+.||.|++|+|+.+||+.+|+.+|..+++++++.++..+|.+++|.|+|+||+.++..
T Consensus 22 ~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~e~~~l~~~~d~~~~g~i~~~eF~~~~~~ 88 (105)
T 1wlz_A 22 HYHAITQEFENFDTMKTNTISREEFRAICNRRVQILTDEQFDRLWNEMPVNAKGRLKYPDFLSRFSS 88 (105)
T ss_dssp THHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHTCCCCHHHHHHHHTTSCBCTTSCBCHHHHHHHHC-
T ss_pred hHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHcCCCCCCCCcHHHHHHHHhc
Confidence 3568999999999999999999999999999999999999999999999999999999999999874
|
| >2jq6_A EH domain-containing protein 1; metal binding protein; NMR {Homo sapiens} PDB: 2kff_A 2kfg_A 2kfh_A 2ksp_A | Back alignment and structure |
|---|
Probab=99.23 E-value=1.9e-11 Score=99.94 Aligned_cols=65 Identities=22% Similarity=0.257 Sum_probs=61.0
Q ss_pred HHHHHHHHHhhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHh
Q 042823 387 KEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTD 454 (477)
Q Consensus 387 ~~~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~ 454 (477)
++.++++++|+.|| |++|+|+.+|++.+|+.+| ++++++.+|++.+|.|+||.|+|+||+.+|..
T Consensus 48 ~e~~~l~~~F~~fD-d~dG~Is~~El~~~l~~~g--l~~~el~~I~~~~D~d~dG~Ld~~EF~~am~l 112 (139)
T 2jq6_A 48 KDKPTYDEIFYTLS-PVNGKITGANAKKEMVKSK--LPNTVLGKIWKLADVDKDGLLDDEEFALANHL 112 (139)
T ss_dssp GTHHHHHHHHHHSC-CSSSEEEHHHHHHHHHHTT--CCHHHHHHHHHHHCSSCCSEEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhC-CCCCeECHHHHHHHHHHhC--cCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence 56789999999999 9999999999999999977 78999999999999999999999999999864
|
| >1a4p_A S100A10; S100 family, EF-hand protein, ligand of annexin II, calcium/phospholipid binding protein, calcium-phospholipid protein complex; 2.25A {Homo sapiens} SCOP: a.39.1.2 PDB: 1bt6_A | Back alignment and structure |
|---|
Probab=99.22 E-value=1e-11 Score=95.86 Aligned_cols=68 Identities=19% Similarity=0.313 Sum_probs=60.8
Q ss_pred HHHHHHHHHhhhhcCCCCCCcCHHHHHHHHHH-----cCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhh
Q 042823 387 KEKQKLMEKFREMDTDNSDTLTLSELKAGLAK-----LGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDI 455 (477)
Q Consensus 387 ~~~~~l~~~F~~~D~~~~G~I~~~el~~~l~~-----~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~ 455 (477)
+++++++++|+.||. ++|+|+.+||+.+|+. +|..+++++++.+++.+|.|+||.|+|+||+.++...
T Consensus 6 ~~~~~l~~~F~~fD~-~dg~Is~~El~~~l~~~~~~~lg~~~~~~ev~~l~~~~D~d~dG~I~f~EF~~~~~~~ 78 (96)
T 1a4p_A 6 HAMETMMFTFHKFAG-DKGYLTKEDLRVLMEKEFPGFLENQKDPLAVDKIMKDLDQCRDGKVGFQSFFSLIAGL 78 (96)
T ss_dssp HHHHHHHHHHHHHHG-GGCSBCHHHHHHHHHHHCHHHHHHSCCTTHHHHHHHHHCTTSSSCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcC-CCCeECHHHHHHHHHHHcccccccccCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence 456789999999994 6779999999999987 6777899999999999999999999999999998753
|
| >1psr_A Psoriasin, S100A7; EF-hand protein, MAD phasing, psoriasis, S100 protein family; 1.05A {Homo sapiens} SCOP: a.39.1.2 PDB: 2psr_A 2wor_A* 2wos_A* 3psr_A 2wnd_A | Back alignment and structure |
|---|
Probab=99.22 E-value=5e-12 Score=98.45 Aligned_cols=67 Identities=18% Similarity=0.304 Sum_probs=60.5
Q ss_pred HHHHHHHHHhhhhcCCCCCCcCHHHHHHHHHH-----cCC--CCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHh
Q 042823 387 KEKQKLMEKFREMDTDNSDTLTLSELKAGLAK-----LGS--ALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTD 454 (477)
Q Consensus 387 ~~~~~l~~~F~~~D~~~~G~I~~~el~~~l~~-----~g~--~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~ 454 (477)
+++++++++|+.||.+ +|+|+.+||+.+|+. +|. .+++++++++++.+|.|+||.|+|+||+.+|..
T Consensus 7 ~~~~~l~~~F~~fD~~-~g~Is~~El~~~l~~~~~~~lg~~~~~~~~ev~~l~~~~D~d~dG~I~f~EF~~~~~~ 80 (100)
T 1psr_A 7 RSIIGMIDMFHKYTRR-DDKIDKPSLLTMMKENFPNFLSACDKKGTNYLADVFEKKDKNEDKKIDFSEFLSLLGD 80 (100)
T ss_dssp HHHHHHHHHHHHTCCT-TSCBCHHHHHHHHHHHCHHHHHHHHHTTCCGGGTHHHHHCTTCSSCBCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCC-CCeECHHHHHHHHHHHhHhhhccccccCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence 4567899999999976 899999999999987 565 678889999999999999999999999999875
|
| >2i7a_A Calpain 13; calcium-dependent cytoplasmic cysteine proteinases, like, EF-hand, structural genomics, structural genomics CON SGC, hydrolase; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.21 E-value=2.8e-11 Score=104.68 Aligned_cols=71 Identities=18% Similarity=0.272 Sum_probs=57.8
Q ss_pred cCCCCCCcCHHHHHHHHHHc------CCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhhhCCCcHHHHHHHHHHhcc
Q 042823 400 DTDNSDTLTLSELKAGLAKL------GSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIYKLETPELLEKAFQYLDK 473 (477)
Q Consensus 400 D~~~~G~I~~~el~~~l~~~------g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~l~~aF~~~D~ 473 (477)
+.|++|.|+.+||+.+|+.+ |..+++++++.+++.+|.+++|.|+|+||+.++... ++++.||+.||
T Consensus 14 ~~~~dG~I~~~EL~~~l~~l~~~~~~g~~~~~~~~~~l~~~~D~d~~G~I~f~EF~~~~~~~------~~l~~aF~~fD- 86 (174)
T 2i7a_A 14 LVPRGSDIDATQLQGLLNQELLTGPPGDMFSLDECRSLVALMELKVNGRLDQEEFARLWKRL------VHYQHVFQKVQ- 86 (174)
T ss_dssp SCC-CCCEEHHHHHHHHHHHHC-----CCCCHHHHHHHHHHHCSSCSSEECHHHHHHHHHHH------HHHHHHHHHHC-
T ss_pred cCCCCCcCCHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHH------HHHHHHHHHhc-
Confidence 56888888888888888887 667888888888888888888888888888877643 46888888888
Q ss_pred CCCC
Q 042823 474 NSDQ 477 (477)
Q Consensus 474 d~~G 477 (477)
|++|
T Consensus 87 d~~G 90 (174)
T 2i7a_A 87 TSPG 90 (174)
T ss_dssp SBTT
T ss_pred CCCC
Confidence 8887
|
| >1xk4_A Calgranulin A; S100 family, heterotetramer, metal binding protein; HET: FLC; 1.80A {Homo sapiens} SCOP: a.39.1.2 PDB: 1mr8_A | Back alignment and structure |
|---|
Probab=99.20 E-value=9.3e-12 Score=95.70 Aligned_cols=68 Identities=15% Similarity=0.278 Sum_probs=62.0
Q ss_pred HHHHHHHHHhhhhcC-CCCC-CcCHHHHHHHH-HHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHh
Q 042823 387 KEKQKLMEKFREMDT-DNSD-TLTLSELKAGL-AKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTD 454 (477)
Q Consensus 387 ~~~~~l~~~F~~~D~-~~~G-~I~~~el~~~l-~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~ 454 (477)
+..+.++.+|+.||. |++| +|+.+||+.+| +.+|..++..+++.+++.+|.|+||.|+|+||+.++..
T Consensus 7 ~~~~~l~~~F~~~D~~d~dG~~I~~~El~~~l~~~~g~~~~~~~~~~l~~~~D~d~dG~I~~~EF~~~~~~ 77 (93)
T 1xk4_A 7 KALNSIIDVYHKYSLIKGNFHAVYRDDLKKLLETESPQYIRKKGADVWFKELDINTDGAVNFQEFLILVIK 77 (93)
T ss_dssp HHHHHHHHHHHHHHTSSSCTTCBCHHHHHHHHHHHSCHHHHTTCHHHHHHHHCTTCSSSBCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhcCCCcCeECHHHHHHHHHHHCcccCCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHH
Confidence 345689999999999 9999 99999999999 78887777788999999999999999999999999865
|
| >2hps_A Coelenterazine-binding protein with bound coelent; bioluminescence, southeast collabora structural genomics, secsg, structural genomics, PSI; HET: CTZ; 1.72A {Renilla muelleri} PDB: 2hq8_A | Back alignment and structure |
|---|
Probab=99.18 E-value=1.7e-11 Score=107.32 Aligned_cols=80 Identities=15% Similarity=0.150 Sum_probs=54.4
Q ss_pred hhhhcCCCCCCcCHHHHHHHHHHcCCCCC-HHHHHH--HHHHhcCCCCCcccHHHHHHHHHhhhCCCcHHHHHHHHHHhc
Q 042823 396 FREMDTDNSDTLTLSELKAGLAKLGSALE-ESEVNQ--YMEAGDIDGNGNIDSIEFVNLMTDIYKLETPELLEKAFQYLD 472 (477)
Q Consensus 396 F~~~D~~~~G~I~~~el~~~l~~~g~~~~-~~~i~~--~~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~l~~aF~~~D 472 (477)
|+.+|.|++|.|+.+| .++..++...+ .+++.. +...+|.+++|.|+++||..++.......+++++..+|+.+|
T Consensus 71 f~~~D~d~dg~I~~~E--~~~~~~~~~~~~~~~~~~~f~~~~fD~d~~G~I~~~E~~~~l~~~g~~~~~~~~~~~~~~~D 148 (186)
T 2hps_A 71 APGVRISVEEAAVNAT--DSLLKMKGEEKAMAVIQSLIMYDCIDTDKDGYVSLPEFKAFLQAVGPDLTDDKAITCFNTLD 148 (186)
T ss_dssp CTTCEEEHHHHHHHHH--HHHHHCCTHHHHHTTHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHCTTCCHHHHHHHHHHHC
T ss_pred HHhcCCCCCCcccHHH--HHHHHhcCChHHHHHHHHHHHHHHccCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHHc
Confidence 6677777777777777 44544432211 112222 225568888999999999888877655567788888999999
Q ss_pred cCCCC
Q 042823 473 KNSDQ 477 (477)
Q Consensus 473 ~d~~G 477 (477)
+|+||
T Consensus 149 ~d~dG 153 (186)
T 2hps_A 149 FNKNG 153 (186)
T ss_dssp TTCSS
T ss_pred CCCCC
Confidence 98887
|
| >3dd4_A KV channel-interacting protein 4; EF-hands protein, ION transport, ionic channel, membrane, PO potassium channel, potassium transport, transport; 3.00A {Mus musculus} PDB: 2e6w_A | Back alignment and structure |
|---|
Probab=99.18 E-value=9.4e-11 Score=106.35 Aligned_cols=91 Identities=22% Similarity=0.236 Sum_probs=78.1
Q ss_pred ChHHHHHHHHHhhhhcCCCCCCcCHHHHHHHHHHc-CCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhhhCCCcHHH
Q 042823 385 PTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKL-GSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIYKLETPEL 463 (477)
Q Consensus 385 ~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~-g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~ 463 (477)
+.++++.+...|.. .+++|.|+.+||+.++..+ +...+...++.+++.+|.|++|.|+|+||+.++........++.
T Consensus 62 s~~ei~~l~~~F~~--~d~~G~Is~~ef~~~l~~~~~~~~~~~~~~~lf~~~D~d~~G~I~~~Ef~~~l~~~~~~~~~~~ 139 (229)
T 3dd4_A 62 TKKELQILYRGFKN--ECPSGVVNEETFKEIYSQFFPQGDSTTYAHFLFNAFDTDHNGAVSFEDFIKGLSILLRGTVQEK 139 (229)
T ss_dssp HHHHHHHHHHHHHT--TCCSCCCCHHHHHHHHHHHSCSSSHHHHHHHHHHTTCSSCCSSCCHHHHHHHHHHHHHSCHHHH
T ss_pred CHHHHHHHHHHHHh--hCCCCCcCHHHHHHHHHHHCCCCCcHHHHHHHHHHcCCCCCCeEeHHHHHHHHHHHcCCChHHH
Confidence 44566677777765 5788999999999999984 56677888999999999999999999999999987666666789
Q ss_pred HHHHHHHhccCCCC
Q 042823 464 LEKAFQYLDKNSDQ 477 (477)
Q Consensus 464 l~~aF~~~D~d~~G 477 (477)
++.+|+.||+|+||
T Consensus 140 l~~~F~~~D~d~dG 153 (229)
T 3dd4_A 140 LNWAFNLYDINKDG 153 (229)
T ss_dssp HHHHHHHHCTTCSS
T ss_pred HHHHHHHhCCCCCC
Confidence 99999999999998
|
| >1k8u_A S100A6, calcyclin, CACY; calcium regulatory protein, calcium free, signaling protein; HET: MSE; 1.15A {Homo sapiens} SCOP: a.39.1.2 PDB: 1k96_A 1k9k_A 1k9p_A 1a03_A 1cnp_A 1jwd_A 2cnp_A 2jtt_A | Back alignment and structure |
|---|
Probab=99.17 E-value=2.3e-11 Score=92.81 Aligned_cols=67 Identities=25% Similarity=0.416 Sum_probs=62.6
Q ss_pred HHHHHHHHhhhhc-CCCCC-CcCHHHHHHHHHH---cCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHh
Q 042823 388 EKQKLMEKFREMD-TDNSD-TLTLSELKAGLAK---LGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTD 454 (477)
Q Consensus 388 ~~~~l~~~F~~~D-~~~~G-~I~~~el~~~l~~---~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~ 454 (477)
..++++.+|+.|| +|++| .|+.+||+.+++. +|..+++.+++.+++.+|.+++|.|+|+||+.++..
T Consensus 8 ~~~~l~~~F~~~D~~d~~G~~i~~~el~~~l~~~~~~g~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~ 79 (90)
T 1k8u_A 8 AIGLLVAIFHKYSGREGDKHTLSKKELKELIQKELTIGSKLQDAEIARLMEDLDRNKDQEVNFQEYVTFLGA 79 (90)
T ss_dssp HHHHHHHHHHHHHTSSSCTTEEEHHHHHHHHHHHSCCGGGTTSHHHHHHHHHHHHTTTCEEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccCCCCCcCCHHHHHHHHHHhcccCCCCCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHH
Confidence 4568999999999 69999 9999999999998 999999999999999999999999999999998864
|
| >3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134} | Back alignment and structure |
|---|
Probab=99.17 E-value=8.4e-11 Score=114.36 Aligned_cols=141 Identities=21% Similarity=0.303 Sum_probs=103.4
Q ss_pred ccccccccCCeEEEEEEEccCCceEEEEEee--cCCccchhhHHHHHHHHHHHHhccC-CCCeeEEEEEEEeC---CeEE
Q 042823 27 FGRMLGRGQFGVSYLCTENSTNRPYACKSIA--KKPKMRLAENDMIRREIQIRLYLSG-QPNVVEFKSTYEDE---TAVH 100 (477)
Q Consensus 27 ~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~--~~~~~~~~~~~~~~~e~~~~~~l~~-hpniv~~~~~~~~~---~~~~ 100 (477)
-++.|+.|.++.||++... +..+++|+.. .... ......+.+|..++..|.. +..+++++.++.+. +..|
T Consensus 42 ~~~~l~~G~sn~~y~v~~~--~~~~vlr~~~~p~~~~--~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~ 117 (359)
T 3dxp_A 42 SVEQFKGGQSNPTFKLVTP--GQTYVMRAKPGPKSKL--LPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAF 117 (359)
T ss_dssp EEEECCC-CCSCEEEEECS--SCEEEEECCCC------------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCE
T ss_pred eEEEcCCcccceEEEEEEC--CceEEEEeCCCCCCCC--CCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeE
Confidence 3578999999999998753 4678888764 2211 1123467889999998854 45688899888776 4589
Q ss_pred EEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH--------------------------------------
Q 042823 101 VVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHS-------------------------------------- 142 (477)
Q Consensus 101 lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~-------------------------------------- 142 (477)
+||||++|.++.+.. ...++..+...++.++...|..||+
T Consensus 118 ~vme~v~G~~l~~~~--~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (359)
T 3dxp_A 118 YIMEFVSGRVLWDQS--LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIP 195 (359)
T ss_dssp EEEECCCCBCCCCTT--CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCH
T ss_pred EEEEecCCeecCCCc--cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCCh
Confidence 999999998774311 1236788888999999999999997
Q ss_pred --------------------cCCeeccCCCCceeeeecCCC--CCEEEeecCCccc
Q 042823 143 --------------------MGVMHRDLKPENFSFISRDDN--ALLKVTDFGSALL 176 (477)
Q Consensus 143 --------------------~~ivH~dlkp~Nil~~~~~~~--~~~kl~Dfg~a~~ 176 (477)
..++|||++|.||++ +.+ ..+.|+||+.+..
T Consensus 196 ~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~---~~~~~~v~~viDwe~a~~ 248 (359)
T 3dxp_A 196 AMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMF---HPTEPRVLAVLDWELSTL 248 (359)
T ss_dssp HHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEE---CSSSSCEEEECCCTTCEE
T ss_pred HHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEE---eCCCCcEEEEECcccccc
Confidence 358999999999998 433 3469999998764
|
| >3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A | Back alignment and structure |
|---|
Probab=99.17 E-value=5.3e-11 Score=112.99 Aligned_cols=182 Identities=15% Similarity=0.189 Sum_probs=123.1
Q ss_pred cccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCC--eeEEEEEEEeCC---eEEEE
Q 042823 28 GRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPN--VVEFKSTYEDET---AVHVV 102 (477)
Q Consensus 28 ~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpn--iv~~~~~~~~~~---~~~lv 102 (477)
++.++.|.+..||++. ..+++|+... ......+.+|..++..+..+.. +++++....... ..|+|
T Consensus 25 i~~~~~G~~n~v~~v~-----~~~vlR~~~~-----~~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~v 94 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN-----RDFIFKFPKH-----SRGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAG 94 (304)
T ss_dssp CCEEEECSSEEEEEST-----TSEEEEEESS-----HHHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEE
T ss_pred eEecCCCCcceEEEEC-----CEEEEEecCC-----cchHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEE
Confidence 4668999999999863 4688897532 1345678899999988854433 445555443333 34899
Q ss_pred EeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH----------------------------------------
Q 042823 103 MELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHS---------------------------------------- 142 (477)
Q Consensus 103 ~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~---------------------------------------- 142 (477)
|++++|.+|.+... ..++..+...++.++...|..||+
T Consensus 95 m~~i~G~~l~~~~~--~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (304)
T 3sg8_A 95 FTKIKGVPLTPLLL--NNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKK 172 (304)
T ss_dssp EECCCCEECCHHHH--HTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHH
T ss_pred EcccCCeECCcccc--ccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHH
Confidence 99999988875433 236777788888888888888886
Q ss_pred ------------------cCCeeccCCCCceeeeecCCCCCEEEeecCCccccCCCcceecccccccc---cchhhhh--
Q 042823 143 ------------------MGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFY---IAPEVLR-- 199 (477)
Q Consensus 143 ------------------~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y---~aPE~~~-- 199 (477)
..++|+|++|.||++... ....+.|+||+.+....+.... .....+ .+|+...
T Consensus 173 l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~-~~~~~~~iD~~~~~~~~~~~Dl---~~~~~~~~~~~~~~~~~~ 248 (304)
T 3sg8_A 173 VDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTE-KNTICGIIDFGDAAISDPDNDF---ISLMEDDEEYGMEFVSKI 248 (304)
T ss_dssp HHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETT-TTEEEEECCCTTCEEECTTHHH---HTTCCTTTSCCHHHHHHH
T ss_pred HHHHHHHHHhccccccCCceeEeCCCCcccEEEeCC-CCCEEEEEeCCCCccCChHHHH---HHHHhhccccCHHHHHHH
Confidence 136999999999998321 1456889999988654332111 111111 3344321
Q ss_pred -hhcCC------------ccchHhHHHHHHHHhhCCCCC
Q 042823 200 -RRYGK------------EIDIWSAGVILYILLSGVPPF 225 (477)
Q Consensus 200 -~~~~~------------~~DiwslG~il~~l~tg~~pf 225 (477)
..|+. ..+.|++|.++|.+.+|.++|
T Consensus 249 l~~Y~~~~~~~~~~r~~~~~~~~~l~~~~~~~~~g~~~~ 287 (304)
T 3sg8_A 249 LNHYKHKDIPTVLEKYRMKEKYWSFEKIIYGKEYGYMDW 287 (304)
T ss_dssp HHHHTCSCHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHcCCHHH
Confidence 22322 258999999999999999887
|
| >1cb1_A Calbindin D9K; calcium-binding protein; NMR {Sus scrofa} SCOP: a.39.1.1 | Back alignment and structure |
|---|
Probab=99.16 E-value=1.3e-11 Score=91.40 Aligned_cols=68 Identities=22% Similarity=0.339 Sum_probs=62.3
Q ss_pred HHHHHHHHhhhhcC-CCCC-CcCHHHHHHHHHH-cCCCC-CHHHHHHHHHHhcCCCCCcccHHHHHHHHHhh
Q 042823 388 EKQKLMEKFREMDT-DNSD-TLTLSELKAGLAK-LGSAL-EESEVNQYMEAGDIDGNGNIDSIEFVNLMTDI 455 (477)
Q Consensus 388 ~~~~l~~~F~~~D~-~~~G-~I~~~el~~~l~~-~g~~~-~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~ 455 (477)
..++++.+|+.||. |++| .|+.+||+.+++. +|..+ ++++++.+++.+|.+++|.|+|+||+.++...
T Consensus 5 ~~~~l~~~F~~~D~~d~~G~~i~~~el~~~l~~~~g~~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~~ 76 (78)
T 1cb1_A 5 SPAELKSIFEKYAAKEGDPNQLSKEELKQLIQAEFPSLLKGPRTLDDLFQELDKNGDGEVSFEEFQVLVKKI 76 (78)
T ss_dssp CHHHHHHHHHHHHTTSSSTTEECHHHHHHHHHHHCSSCCSSCCCSSHHHHHTCCCSSSSEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccCCCcCEeCHHHHHHHHHHHhhhhcccHHHHHHHHHHhcCCCCCCCcHHHHHHHHHHh
Confidence 46789999999999 9999 9999999999986 88777 88899999999999999999999999988653
|
| >1sjj_A Actinin; 3-helix bundle, calponin homology domain, calmodulin-like domain, actin binding protein, contractIle protein; 20.00A {Gallus gallus} SCOP: i.15.1.1 | Back alignment and structure |
|---|
Probab=99.16 E-value=6.4e-11 Score=128.62 Aligned_cols=93 Identities=16% Similarity=0.332 Sum_probs=84.5
Q ss_pred CChHHHHHHHHHhhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhhhC-CCcHH
Q 042823 384 LPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIYK-LETPE 462 (477)
Q Consensus 384 ~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~~~-~~~~~ 462 (477)
++.++...++.+|+.||.|++|+|+.+||+.+|+.+|..+++.+++.++..+|.|+||.|+|+||+.++..... ....+
T Consensus 719 l~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~~~~~~D~d~dG~I~~~EF~~~~~~~~~~~~~~~ 798 (863)
T 1sjj_A 719 ISQEQMNEFRASFNHFDRKKTGMMDCEDFRACLISMGYNMGEAEFARIMSIVDPNRMGVVTFQAFIDFMSRETADTDTAD 798 (863)
T ss_dssp SSHHHHHHHHHHHTTTCSSSSSEEESTTHHHHHHHHTCCCCTHHHHHHHHHHCTTSCSEEETTHHHHTHHHHSTTCSSSH
T ss_pred CCHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhcCCCCHH
Confidence 45667889999999999999999999999999999999999999999999999999999999999999876543 44557
Q ss_pred HHHHHHHHhccCCCC
Q 042823 463 LLEKAFQYLDKNSDQ 477 (477)
Q Consensus 463 ~l~~aF~~~D~d~~G 477 (477)
.+..||+.| +||+|
T Consensus 799 ~l~~aF~~~-~d~~G 812 (863)
T 1sjj_A 799 QVMASFKIL-AGDKN 812 (863)
T ss_dssp HHHHHHHGG-GTSSS
T ss_pred HHHHHHHHH-hCCCC
Confidence 899999999 89988
|
| >2l4h_A Calcium and integrin-binding protein 1; metal binding protei; NMR {Homo sapiens} PDB: 2l4i_A 2lm5_A | Back alignment and structure |
|---|
Probab=99.15 E-value=2.9e-11 Score=108.44 Aligned_cols=91 Identities=14% Similarity=0.154 Sum_probs=78.7
Q ss_pred cCChHHHHHHHHHhhhhcC-----CC-C--CCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCc-ccHHHHHHHHH
Q 042823 383 NLPTKEKQKLMEKFREMDT-----DN-S--DTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGN-IDSIEFVNLMT 453 (477)
Q Consensus 383 ~~~~~~~~~l~~~F~~~D~-----~~-~--G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~-i~~~eF~~~~~ 453 (477)
.++..+++.+.++|..+|+ |+ + |.|+.+||.. ++.+|..++. +++++.+|.+++|. |+|+||+.++.
T Consensus 44 ~~s~~ei~~l~~~F~~~D~~~~~~d~~~~dG~I~~~E~~~-l~~lg~~~~~---~~lf~~~D~d~dG~~I~f~EF~~~~~ 119 (214)
T 2l4h_A 44 FLTKQEILLAHRRFCELLPQEQRSVESSLRAQVPFEQILS-LPELKANPFK---ERICRVFSTSPAKDSLSFEDFLDLLS 119 (214)
T ss_dssp SCCHHHHHHHHHHHHHHSCGGGCCHHHHTTSEECHHHHTT-CHHHHTSTTH---HHHHHHHCCSSSCCSEEHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHhCcccccccccccCCcCCHHHHHH-hhccCCChHH---HHHHHHhCcCCCCCEecHHHHHHHHH
Confidence 4677888899999999998 66 6 9999999999 9999988875 45788899999999 99999999998
Q ss_pred hhhCC-CcHHHHHHHHHHhccCCCC
Q 042823 454 DIYKL-ETPELLEKAFQYLDKNSDQ 477 (477)
Q Consensus 454 ~~~~~-~~~~~l~~aF~~~D~d~~G 477 (477)
..... ..+++++.||+.||+|++|
T Consensus 120 ~~~~~~~~~~~l~~~F~~~D~d~dG 144 (214)
T 2l4h_A 120 VFSDTATPDIKSHYAFRIFDFDDDG 144 (214)
T ss_dssp HTSSCSCHHHHHHHHHHHHCTTCSS
T ss_pred HHcCCCCHHHHHHHHHHHhCCCCCC
Confidence 65543 3457899999999999998
|
| >3bow_A Calpain-2 catalytic subunit; cysteine protease, inhibitor, cell membrane, hydrolase, MEMB protease, thiol protease, phosphoprotein; 2.40A {Rattus norvegicus} PDB: 3df0_A 1df0_A 1u5i_A 1kfu_L 1kfx_L | Back alignment and structure |
|---|
Probab=99.12 E-value=1.1e-10 Score=123.02 Aligned_cols=87 Identities=17% Similarity=0.289 Sum_probs=80.4
Q ss_pred CChHH-HHHHHHHhhhhcCCCCCCcCHHHHHHHHHHc--------CCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHh
Q 042823 384 LPTKE-KQKLMEKFREMDTDNSDTLTLSELKAGLAKL--------GSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTD 454 (477)
Q Consensus 384 ~~~~~-~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~--------g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~ 454 (477)
+++++ .++++++|+.+| |++|.|+.+||+.+|+.+ |..++.++++.++..+|.|++|.|+|+||+.++..
T Consensus 525 ls~~e~~~~l~~~F~~~D-d~dG~Is~~El~~~L~~l~~~~~~~~g~~~s~~~~~~l~~~~D~d~~G~I~f~EF~~l~~~ 603 (714)
T 3bow_A 525 ANEEDIGDGFRRLFAQLA-GEDAEISAFELQTILRRVLAKREDIKSDGFSIETCKIMVDMLDEDGSGKLGLKEFYILWTK 603 (714)
T ss_dssp CSGGGCCHHHHHHHHHHH-GGGTSBCHHHHHHHHHHHHTTCTTSCCSCCCHHHHHHHHHHHCCSSCSSBCHHHHHHHHHH
T ss_pred CChhhHHHHHHHHHHHHc-CCCCcCCHHHHHHHHHHHhhhcccccCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence 55666 789999999999 999999999999999997 88999999999999999999999999999999876
Q ss_pred hhCCCcHHHHHHHHHHhccCCCC
Q 042823 455 IYKLETPELLEKAFQYLDKNSDQ 477 (477)
Q Consensus 455 ~~~~~~~~~l~~aF~~~D~d~~G 477 (477)
. ++++.+|+.||+|++|
T Consensus 604 ~------~~l~~~F~~~D~d~dG 620 (714)
T 3bow_A 604 I------QKYQKIYREIDVDRSG 620 (714)
T ss_dssp H------HHHHHHHHHHCTTCCS
T ss_pred H------HHHHHHHHHhCCCCCC
Confidence 4 5799999999999998
|
| >1qls_A S100C protein, calgizzarin; metal-binding protein/inhibitor, S100 family, EF-hand protein, complex (ligand/annexin), ligand of annexin II; 2.3A {Sus scrofa} SCOP: a.39.1.2 PDB: 1nsh_A | Back alignment and structure |
|---|
Probab=99.08 E-value=1.6e-10 Score=89.79 Aligned_cols=67 Identities=21% Similarity=0.385 Sum_probs=60.9
Q ss_pred HHHHHHHHhhhhc-CCCCC-CcCHHHHHHHHH-Hc----CCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHh
Q 042823 388 EKQKLMEKFREMD-TDNSD-TLTLSELKAGLA-KL----GSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTD 454 (477)
Q Consensus 388 ~~~~l~~~F~~~D-~~~~G-~I~~~el~~~l~-~~----g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~ 454 (477)
..++++.+|..|| +|++| +|+.+||+.+++ .+ |..+++.+++.+++.+|.|++|.|+|+||+.++..
T Consensus 11 ~~~~l~~~F~~~Dd~d~~G~~I~~~el~~~l~~~~~~~~~~~~~~~~~~~l~~~~D~~~dg~I~~~EF~~~~~~ 84 (99)
T 1qls_A 11 CIESLIAIFQKHAGRDGNNTKISKTEFLIFMNTELAAFTQNQKDPGVLDRMMKKLDLDSDGQLDFQEFLNLIGG 84 (99)
T ss_dssp HHHHHHHHHHHHHTTSSCTTCBCHHHHHHHHTTTSHHHHHHCCCTHHHHHHHHHHCTTCSSSBCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCcCeeCHHHHHHHHHHHcchhccccCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence 4568999999998 99999 999999999998 45 37788999999999999999999999999998865
|
| >1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A | Back alignment and structure |
|---|
Probab=99.05 E-value=3e-11 Score=124.59 Aligned_cols=84 Identities=13% Similarity=0.249 Sum_probs=21.5
Q ss_pred HHHHHHhhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhhhCCCcHHHHHHHHH
Q 042823 390 QKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIYKLETPELLEKAFQ 469 (477)
Q Consensus 390 ~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~l~~aF~ 469 (477)
..++++|+.||+|++|.|+.+||+.+|+.+|..+++++++.+++.+|.|++|.|+|+||+.++..... .+++++||+
T Consensus 11 ~~l~~~F~~fD~d~dG~Is~~El~~~l~~lg~~~s~~el~~lf~~~D~d~~G~I~f~EF~~~~~~l~~---~~el~~aF~ 87 (624)
T 1djx_A 11 HWIHSCLRKADKNKDNKMNFKELKDFLKELNIQVDDGYARKIFRECDHSQTDSLEDEEIETFYKMLTQ---RAEIDRAFE 87 (624)
T ss_dssp ---------------------------------------------------------CTTHHHHHHTC---CHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHHhcc---HHHHHHHHH
Confidence 46899999999999999999999999999999999999999999999999999999999999976532 368999999
Q ss_pred HhccCCCC
Q 042823 470 YLDKNSDQ 477 (477)
Q Consensus 470 ~~D~d~~G 477 (477)
.||++ +|
T Consensus 88 ~fD~~-~G 94 (624)
T 1djx_A 88 EAAGS-AE 94 (624)
T ss_dssp HHHTT-SS
T ss_pred HhcCC-CC
Confidence 99985 65
|
| >1eg3_A Dystrophin; EF-hand like domain, WW domain, structural protein; 2.00A {Homo sapiens} SCOP: a.39.1.7 a.39.1.7 b.72.1.1 PDB: 1eg4_A | Back alignment and structure |
|---|
Probab=99.05 E-value=8.5e-10 Score=99.78 Aligned_cols=95 Identities=16% Similarity=0.218 Sum_probs=79.1
Q ss_pred HHHhhhcCCCCCCCccHHHHHHHHHhhCCCCCHHHHHHHHHHhhccchHHHHHhcCChHHHHHHHHHhhhhcCCCCCCcC
Q 042823 329 KEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNSSTLESLCENLPTKEKQKLMEKFREMDTDNSDTLT 408 (477)
Q Consensus 329 ~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~F~~~D~~~~G~I~ 408 (477)
.-+|..||.+++|+|++.||..+|.-+.. ....++++.+|+++| |++|+|+
T Consensus 135 ~~lf~~FD~~~~G~I~f~ef~~aLs~l~r----------------------------G~leeKL~w~F~lyD-D~~G~I~ 185 (261)
T 1eg3_A 135 NWLLNVYDTGRTGRIRVLSFKTGIISLCK----------------------------AHLEDKYRYLFKQVA-SSTGFCD 185 (261)
T ss_dssp HHHHHHHCTTCCSEEEHHHHHHHHHHTSS----------------------------SCHHHHHHHHHHHHS-CTTSCBC
T ss_pred HHHHHHccCCCCceEeHHHHHHHHHHHcC----------------------------CCHHHHHHHHHheee-CCCCCCc
Confidence 44899999999999999999988887632 122468999999999 9999999
Q ss_pred HHHHHHHHHH-------cCC------CCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHh
Q 042823 409 LSELKAGLAK-------LGS------ALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTD 454 (477)
Q Consensus 409 ~~el~~~l~~-------~g~------~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~ 454 (477)
.+||..++++ +|. .-.++.++.+|+.+| +||.|+.+||+..+..
T Consensus 186 ~~El~~il~~i~~i~~~vge~~~~~~~~~e~~v~~~F~~~d--~dg~It~~EFl~~~~~ 242 (261)
T 1eg3_A 186 QRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFAN--NKPEIEAALFLDWMRL 242 (261)
T ss_dssp HHHHHHHHHHHHHHHHHTTCGGGGTCSCCHHHHHHHHHHTT--TCSCBCHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHhcCCcccCCCCCHHHHHHHHHHhCC--CCCcCCHHHHHHHHHh
Confidence 9999998855 333 335778899999996 7899999999998875
|
| >1snl_A Nucleobindin 1, calnuc; EF-hand, calcium-binding, metal binding protein; NMR {Homo sapiens} SCOP: a.39.1.7 | Back alignment and structure |
|---|
Probab=99.00 E-value=5.8e-10 Score=87.32 Aligned_cols=64 Identities=20% Similarity=0.158 Sum_probs=56.2
Q ss_pred HHHHHhhhhcCCCCCCcCHHHHHHHHHH-----cCCCCCH-----------HHHHHHHHHhcCCCCCcccHHHHHHHHHh
Q 042823 391 KLMEKFREMDTDNSDTLTLSELKAGLAK-----LGSALEE-----------SEVNQYMEAGDIDGNGNIDSIEFVNLMTD 454 (477)
Q Consensus 391 ~l~~~F~~~D~~~~G~I~~~el~~~l~~-----~g~~~~~-----------~~i~~~~~~~d~~~~g~i~~~eF~~~~~~ 454 (477)
.++.+|+.||.|++|+|+.+||..+++. +|..++. ..+..+++.+|.|+||.|+|+||+.++.+
T Consensus 21 ~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~g~~~~~~~~~~~~e~~~~~~~~~~~~~D~d~dG~Is~~EF~~~~~~ 100 (103)
T 1snl_A 21 NPKTFFILHDINSDGVLDEQELEALFTKELEKVYDPKNEEDDMREMEEERLRMREHVMKNVDTNQDRLVTLEEFLASTQR 100 (103)
T ss_dssp CHHHHHHHHCSSCCSEEEHHHHHHHHHHHHHTTSCCSSCSSHHHHTTHHHHHHHHHHHHHTCSSCSSEEEHHHHHHHHHC
T ss_pred CHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHhccCCCCccHHHHHHHHHHHHHHHHHHcCCCCCCcCCHHHHHHHHhc
Confidence 5789999999999999999999999986 5766543 35889999999999999999999998864
|
| >3fia_A Intersectin-1; EH 1 domain, NESG, structural genomics, PSI- 2, protein structure initiative, northeast structural genomics consortium; 1.45A {Homo sapiens} PDB: 2khn_A | Back alignment and structure |
|---|
Probab=98.99 E-value=1e-09 Score=86.74 Aligned_cols=68 Identities=21% Similarity=0.324 Sum_probs=62.8
Q ss_pred CChHHHHHHHHHhhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHh
Q 042823 384 LPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTD 454 (477)
Q Consensus 384 ~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~ 454 (477)
++.+++.+++++|+.+|+ ++|+|+.+|++.+|...| ++++++.+|++.+|.|+||.|+|+||+.+|..
T Consensus 27 it~ee~~~y~~iF~~lD~-~dG~Isg~elr~~~~~sg--Lp~~~L~~Iw~laD~d~dG~Ld~~EF~~aM~L 94 (121)
T 3fia_A 27 ITVEERAKHDQQFHSLKP-ISGFITGDQARNFFFQSG--LPQPVLAQIWALADMNNDGRMDQVEFSIAMKL 94 (121)
T ss_dssp CCHHHHHHHHHHHHHTCC-BTTBEEHHHHHHHHGGGC--CCHHHHHHHHHHHCTTCSSEECHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCC-CCCeECHHHHHHHHHHcC--CCHHHHHHHHHHHcCCCCCcCCHHHHHHHHHH
Confidence 567889999999999998 899999999999999875 67899999999999999999999999998864
|
| >3fs7_A Parvalbumin, thymic; calcium-binding protein, EF-hand, acetylation, calcium, metal binding protein; 1.95A {Gallus gallus} SCOP: a.39.1.4 PDB: 2kqy_A | Back alignment and structure |
|---|
Probab=98.97 E-value=2.1e-09 Score=85.01 Aligned_cols=84 Identities=12% Similarity=0.174 Sum_probs=72.5
Q ss_pred HHHHHHhhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhh---hCCCcHHHHHH
Q 042823 390 QKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDI---YKLETPELLEK 466 (477)
Q Consensus 390 ~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~---~~~~~~~~l~~ 466 (477)
+++..+|+.+| ++|.|+.+||..++.. ...+.+++..+++.+|.+++|.|+.+||..++... ....+++++..
T Consensus 10 ~ei~~~~~~~D--~~g~i~~~eF~~~~~~--~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~ 85 (109)
T 3fs7_A 10 KDIESALSSCQ--AADSFNYKSFFSTVGL--SSKTPDQIKKVFGILDQDKSGFIEEEELQLFLKNFSSSARVLTSAETKA 85 (109)
T ss_dssp HHHHHHHHHTC--STTCCCHHHHHHHHTC--TTCCHHHHHHHHHHHSTTCSSSBCHHHHHTTGGGTCTTSCCCCHHHHHH
T ss_pred HHHHHHHHhcC--CCCcCcHHHHHHHHhc--CCCcHHHHHHHHHHHCCCCCCeEeHHHHHHHHHHHhcccccCCHHHHHH
Confidence 45667777778 8999999999998865 34567889999999999999999999999998876 45667889999
Q ss_pred HHHHhccCCCC
Q 042823 467 AFQYLDKNSDQ 477 (477)
Q Consensus 467 aF~~~D~d~~G 477 (477)
+|+.+|.|+||
T Consensus 86 ~~~~~D~~~dg 96 (109)
T 3fs7_A 86 FLAAGDTDGDG 96 (109)
T ss_dssp HHHHHCTTCSS
T ss_pred HHHHhCCCCCC
Confidence 99999999998
|
| >2lv7_A Calcium-binding protein 7; metal binding protein; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.96 E-value=1.2e-09 Score=84.66 Aligned_cols=71 Identities=27% Similarity=0.444 Sum_probs=61.2
Q ss_pred ccCCchhhHHHHHHhhhcCCCCCCCccHHHHHHHHHhhCCCCCHHHHHHHHHHhhccchHHHHHhcCChHHHHHHHHHhh
Q 042823 318 EYLPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNSSTLESLCENLPTKEKQKLMEKFR 397 (477)
Q Consensus 318 ~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~F~ 397 (477)
..++.++...++++|..+|.|++|+|+.+||..+|+.+|..+++. ++.++|+
T Consensus 28 ~~l~~~~~~el~~~F~~~D~d~~G~I~~~El~~~l~~lg~~~~~~----------------------------ei~~l~~ 79 (100)
T 2lv7_A 28 VDIPEDELEEIREAFKVFDRDGNGFISKQELGTAMRSLGYMPNEV----------------------------ELEVIIQ 79 (100)
T ss_dssp CCCCGGGHHHHHHHHHHTCSSCSSCBCHHHHHHHHHHHTCCCCTT----------------------------THHHHHH
T ss_pred ccCCHHHHHHHHHHHHHHcCCCCCcCCHHHHHHHHHHhCCCCCHH----------------------------HHHHHHH
Confidence 446778889999999999999999999999999999999877753 3445677
Q ss_pred hhcCCCCCCcCHHHHHHHH
Q 042823 398 EMDTDNSDTLTLSELKAGL 416 (477)
Q Consensus 398 ~~D~~~~G~I~~~el~~~l 416 (477)
.+|.|++|.|+.+||..+|
T Consensus 80 ~~D~d~dG~I~~~EF~~~m 98 (100)
T 2lv7_A 80 RLDMDGDGQVDFEEFVTLL 98 (100)
T ss_dssp HHCSSCSSSBCHHHHHHHT
T ss_pred HHCCCCCCeEeHHHHHHHh
Confidence 7899999999999998765
|
| >5pal_A Parvalbumin; calcium-binding protein; 1.54A {Triakis semifasciata} SCOP: a.39.1.4 | Back alignment and structure |
|---|
Probab=98.94 E-value=4.5e-09 Score=83.07 Aligned_cols=84 Identities=12% Similarity=0.118 Sum_probs=72.4
Q ss_pred HHHHHHhhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhh---hCCCcHHHHHH
Q 042823 390 QKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDI---YKLETPELLEK 466 (477)
Q Consensus 390 ~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~---~~~~~~~~l~~ 466 (477)
+++..+|+.+|. +|.|+.+||..++... ..+.+++..+++.+|.+++|.|+.+||..++... ....+++++..
T Consensus 9 ~ei~~~~~~~d~--~g~i~~~eF~~~~~~~--~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~g~~~~~~~~~~ 84 (109)
T 5pal_A 9 DDINKAISAFKD--PGTFDYKRFFHLVGLK--GKTDAQVKEVFEILDKDQSGFIEEEELKGVLKGFSAHGRDLNDTETKA 84 (109)
T ss_dssp HHHHHHHHHTCS--TTCCCHHHHHHHHTCT--TCCHHHHHHHHHHHCTTCSSEECHHHHHTHHHHHCTTCCCCCHHHHHH
T ss_pred HHHHHHHHHhCC--CCcCcHHHHHHHHhhc--cCcHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHHHHcCCCCCHHHHHH
Confidence 456777777886 9999999999988542 4567889999999999999999999999999876 55677889999
Q ss_pred HHHHhccCCCC
Q 042823 467 AFQYLDKNSDQ 477 (477)
Q Consensus 467 aF~~~D~d~~G 477 (477)
+|+.+|.|++|
T Consensus 85 ~~~~~D~~~dg 95 (109)
T 5pal_A 85 LLAAGDSDHDG 95 (109)
T ss_dssp HHHHHCTTCSS
T ss_pred HHHHhCCCCCC
Confidence 99999999998
|
| >3h4s_E KCBP interacting Ca2+-binding protein; kinesin, motor protein, regulation, complex, calcium, EF- hand, calmodulin, ATP-binding, microtubule; HET: ADP; 2.40A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=98.93 E-value=5.4e-10 Score=92.25 Aligned_cols=86 Identities=9% Similarity=-0.094 Sum_probs=54.2
Q ss_pred HHHHhhhhcCCCCCCcCHHHHHHHHHH-cCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhhh-CCCcHHHHHHHHH
Q 042823 392 LMEKFREMDTDNSDTLTLSELKAGLAK-LGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIY-KLETPELLEKAFQ 469 (477)
Q Consensus 392 l~~~F~~~D~~~~G~I~~~el~~~l~~-~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~~-~~~~~~~l~~aF~ 469 (477)
.++.|+.+|.|++|.|+.+||..++.. +....+.+++..+|+.+|.+++|.|+.+||..++.... ...+.+++..+|+
T Consensus 5 ~~~l~~~~D~d~~G~I~~~EF~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~e~~~~~~ 84 (135)
T 3h4s_E 5 EKSMLLETTSTTKMETKYEDMLPVMAEKMDVEEFVSELCKGFSLLADPERHLITAESLRRNSGILGIEGMSKEDAQGMVR 84 (135)
T ss_dssp --------------CCCC-----------CHHHHHHHHHHHHHHHSBTTTTBBCHHHHHHHGGGGTCCCCCHHHHHHHHH
T ss_pred HHHHHHHHcCCCCCcEeHHHHHHHHHHHccccchHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHhCCCCCCHHHHHHHHH
Confidence 457899999999999999999988865 33333457789999999999999999999999998776 3678889999999
Q ss_pred HhccCCCC
Q 042823 470 YLDKNSDQ 477 (477)
Q Consensus 470 ~~D~d~~G 477 (477)
.+|.|+||
T Consensus 85 ~~D~d~dG 92 (135)
T 3h4s_E 85 EGDLDGDG 92 (135)
T ss_dssp HHCSSCSS
T ss_pred HhCCCCCC
Confidence 99999998
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 477 | ||||
| d1tkia_ | 321 | d.144.1.7 (A:) Titin, kinase domain {Human (Homo s | 1e-83 | |
| d1a06a_ | 307 | d.144.1.7 (A:) Calmodulin-dependent protein kinase | 2e-82 | |
| d1phka_ | 277 | d.144.1.7 (A:) gamma-subunit of glycogen phosphory | 4e-81 | |
| d1koaa2 | 350 | d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C | 2e-79 | |
| d1koba_ | 352 | d.144.1.7 (A:) Twitchin, kinase domain {California | 3e-79 | |
| d2j4za1 | 263 | d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur | 4e-75 | |
| d2ozaa1 | 335 | d.144.1.7 (A:51-385) MAP kinase activated protein | 1e-74 | |
| d1jksa_ | 293 | d.144.1.7 (A:) Death-associated protein kinase, Da | 9e-73 | |
| d1nvra_ | 271 | d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 { | 5e-72 | |
| d1yhwa1 | 293 | d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [ | 3e-71 | |
| d1uu3a_ | 288 | d.144.1.7 (A:) 3-phosphoinositide dependent protei | 3e-71 | |
| d1u5ra_ | 309 | d.144.1.7 (A:) Serine/threonine protein kinase TAO | 6e-71 | |
| d2jfla1 | 288 | d.144.1.7 (A:21-308) STE20-like serine/threonine-p | 2e-68 | |
| d1xjda_ | 320 | d.144.1.7 (A:) Protein kinase C, theta type {Human | 1e-66 | |
| d2java1 | 269 | d.144.1.7 (A:3-271) Serine/threonine-protein kinas | 5e-66 | |
| d1t4ha_ | 270 | d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa | 4e-65 | |
| d1fota_ | 316 | d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni | 5e-63 | |
| d1xwsa_ | 273 | d.144.1.7 (A:) Proto-oncogene serine/threonine-pro | 6e-63 | |
| d1s9ja_ | 322 | d.144.1.7 (A:) Dual specificity mitogen-activated | 2e-62 | |
| d1o6ya_ | 277 | d.144.1.7 (A:) Mycobacterial protein kinase PknB, | 4e-62 | |
| d1omwa3 | 364 | d.144.1.7 (A:186-549) G-protein coupled receptor k | 1e-61 | |
| d1o6la_ | 337 | d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap | 1e-60 | |
| d1ua2a_ | 299 | d.144.1.7 (A:) Cell division protein kinase 7, CDK | 1e-59 | |
| d1vzoa_ | 322 | d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5 | 9e-59 | |
| d1uwha_ | 276 | d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) | 8e-57 | |
| d1q5ka_ | 350 | d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs | 8e-57 | |
| d1pmea_ | 345 | d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien | 2e-56 | |
| d3blha1 | 318 | d.144.1.7 (A:8-325) Cell division protein kinase 9 | 7e-56 | |
| d3bqca1 | 328 | d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu | 2e-54 | |
| d1ob3a_ | 286 | d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod | 2e-54 | |
| d1unla_ | 292 | d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H | 2e-54 | |
| d1blxa_ | 305 | d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H | 9e-54 | |
| d1cm8a_ | 346 | d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s | 1e-53 | |
| d1ckia_ | 299 | d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n | 2e-53 | |
| d1gz8a_ | 298 | d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H | 2e-52 | |
| d2gfsa1 | 348 | d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa | 3e-52 | |
| d1rjba_ | 325 | d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s | 9e-52 | |
| d1rdqe_ | 350 | d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni | 1e-51 | |
| d1byga_ | 262 | d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) | 7e-50 | |
| d1xbba_ | 277 | d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human | 4e-49 | |
| d1jpaa_ | 299 | d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou | 6e-49 | |
| d1fvra_ | 309 | d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [ | 8e-49 | |
| d2b1pa1 | 355 | d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3 | 1e-48 | |
| d1k2pa_ | 258 | d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum | 2e-48 | |
| d1fmka3 | 285 | d.144.1.7 (A:249-533) c-src tyrosine kinase {Human | 4e-48 | |
| d1u59a_ | 285 | d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum | 1e-47 | |
| d1sm2a_ | 263 | d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu | 2e-47 | |
| d1opja_ | 287 | d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou | 3e-47 | |
| d1mp8a_ | 273 | d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma | 2e-46 | |
| d1t46a_ | 311 | d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens | 9e-46 | |
| d1u46a_ | 273 | d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum | 1e-45 | |
| d1qpca_ | 272 | d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom | 4e-45 | |
| d1fgka_ | 299 | d.144.1.7 (A:) Fibroblast growth factor receptor 1 | 2e-44 | |
| d1csna_ | 293 | d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast | 3e-44 | |
| d1xkka_ | 317 | d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb- | 5e-43 | |
| d1lufa_ | 301 | d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n | 5e-43 | |
| d1mqba_ | 283 | d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum | 4e-42 | |
| d1p4oa_ | 308 | d.144.1.7 (A:) Insulin-like growth factor 1 recept | 6e-42 | |
| d1r0pa_ | 311 | d.144.1.7 (A:) Hepatocyte growth factor receptor, | 3e-41 | |
| d1ywna1 | 299 | d.144.1.7 (A:818-1166) Vascular endothelial growth | 3e-40 | |
| d1q8ya_ | 362 | d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces | 9e-38 | |
| d1vjya_ | 303 | d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human | 7e-37 | |
| d1zara2 | 191 | d.144.1.9 (A:91-281) Rio2 serine protein kinase C- | 3e-17 | |
| d1topa_ | 162 | a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) | 2e-15 | |
| d1topa_ | 162 | a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) | 4e-06 | |
| d1lkja_ | 146 | a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharom | 3e-15 | |
| d1lkja_ | 146 | a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharom | 3e-07 | |
| d1dtla_ | 156 | a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) | 3e-15 | |
| d1exra_ | 146 | a.39.1.5 (A:) Calmodulin {Ciliate (Paramecium tetr | 1e-14 | |
| d1exra_ | 146 | a.39.1.5 (A:) Calmodulin {Ciliate (Paramecium tetr | 1e-07 | |
| d2obha1 | 141 | a.39.1.5 (A:26-166) Calmodulin {Human (Homo sapien | 2e-14 | |
| d2obha1 | 141 | a.39.1.5 (A:26-166) Calmodulin {Human (Homo sapien | 7e-08 | |
| d1juoa_ | 172 | a.39.1.8 (A:) Sorcin {Human (Homo sapiens) [TaxId: | 7e-14 | |
| d1juoa_ | 172 | a.39.1.8 (A:) Sorcin {Human (Homo sapiens) [TaxId: | 3e-04 | |
| d1w7jb1 | 139 | a.39.1.5 (B:11-149) Myosin Essential Chain {Human | 1e-12 | |
| d1uhka1 | 187 | a.39.1.5 (A:3-189) Calcium-regulated photoprotein | 3e-12 | |
| d1y1xa_ | 182 | a.39.1.8 (A:) Programmed cell death 6 protein-like | 3e-12 | |
| d1alva_ | 173 | a.39.1.8 (A:) Calpain small (regulatory) subunit ( | 4e-12 | |
| d1alva_ | 173 | a.39.1.8 (A:) Calpain small (regulatory) subunit ( | 0.002 | |
| d1k94a_ | 165 | a.39.1.8 (A:) Grancalcin {Human (Homo sapiens) [Ta | 5e-12 | |
| d1k94a_ | 165 | a.39.1.8 (A:) Grancalcin {Human (Homo sapiens) [Ta | 3e-05 | |
| d1qv0a_ | 189 | a.39.1.5 (A:) Calcium-regulated photoprotein {Hydr | 5e-12 | |
| d1qxpa2 | 188 | a.39.1.8 (A:515-702) Calpain large subunit, C-term | 1e-11 | |
| d1qxpa2 | 188 | a.39.1.8 (A:515-702) Calpain large subunit, C-term | 4e-05 | |
| d5pala_ | 109 | a.39.1.4 (A:) Parvalbumin {Leopard shark (Triakis | 1e-11 | |
| d1rroa_ | 108 | a.39.1.4 (A:) Oncomodulin {Rat (Rattus norvegicus) | 1e-11 | |
| d1s6ja_ | 87 | a.39.1.5 (A:) Calcium-dependent protein kinase sk5 | 3e-11 | |
| d1s6ja_ | 87 | a.39.1.5 (A:) Calcium-dependent protein kinase sk5 | 2e-07 | |
| d1s6ia_ | 182 | a.39.1.5 (A:) Calcium-dependent protein kinase sk5 | 4e-11 | |
| d1s6ia_ | 182 | a.39.1.5 (A:) Calcium-dependent protein kinase sk5 | 3e-08 | |
| d1oqpa_ | 77 | a.39.1.5 (A:) Caltractin (centrin 2) {Green algae | 6e-11 | |
| d1oqpa_ | 77 | a.39.1.5 (A:) Caltractin (centrin 2) {Green algae | 0.002 | |
| d1pvaa_ | 109 | a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [Tax | 7e-11 | |
| d1df0a1 | 186 | a.39.1.8 (A:515-700) Calpain large subunit, C-term | 7e-11 | |
| d1df0a1 | 186 | a.39.1.8 (A:515-700) Calpain large subunit, C-term | 0.002 | |
| d2sasa_ | 185 | a.39.1.5 (A:) Sarcoplasmic calcium-binding protein | 7e-11 | |
| d1m45a_ | 146 | a.39.1.5 (A:) Myosin Light Chain Mlc1p {Baker's ye | 8e-11 | |
| d2scpa_ | 174 | a.39.1.5 (A:) Sarcoplasmic calcium-binding protein | 9e-11 | |
| d1rwya_ | 109 | a.39.1.4 (A:) Parvalbumin {Rat (Rattus rattus) [Ta | 1e-10 | |
| d1c7va_ | 68 | a.39.1.5 (A:) Calcium vector protein {Amphioxus (B | 1e-10 | |
| d1c7va_ | 68 | a.39.1.5 (A:) Calcium vector protein {Amphioxus (B | 8e-04 | |
| d2pvba_ | 107 | a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [Tax | 2e-10 | |
| d2pvba_ | 107 | a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [Tax | 0.003 | |
| d1f54a_ | 77 | a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharom | 2e-10 | |
| d1f54a_ | 77 | a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharom | 1e-05 | |
| d1hqva_ | 181 | a.39.1.8 (A:) Apoptosis-linked protein alg-2 {Mous | 3e-10 | |
| d1jc2a_ | 75 | a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) | 4e-10 | |
| d1auib_ | 165 | a.39.1.5 (B:) Calcineurin regulatory subunit (B-ch | 4e-10 | |
| d1nyaa_ | 176 | a.39.1.5 (A:) Calerythrin {Saccharopolyspora eryth | 4e-10 | |
| d1wdcb_ | 142 | a.39.1.5 (B:) Myosin Essential Chain {Bay scallop | 5e-10 | |
| d2zfda1 | 183 | a.39.1.5 (A:32-214) Calcineurin B-like protein 2 { | 1e-09 | |
| d1ij5a_ | 321 | a.39.1.9 (A:) Cbp40 (plasmodial specific CaII-bind | 1e-09 | |
| d1ij5a_ | 321 | a.39.1.9 (A:) Cbp40 (plasmodial specific CaII-bind | 4e-07 | |
| d1ij5a_ | 321 | a.39.1.9 (A:) Cbp40 (plasmodial specific CaII-bind | 6e-06 | |
| d1wdcc_ | 152 | a.39.1.5 (C:) Myosin Regulatory Chain {Bay scallop | 4e-09 | |
| d1wrka1 | 82 | a.39.1.5 (A:4-85) Troponin C {Human (Homo sapiens) | 6e-09 | |
| d1wrka1 | 82 | a.39.1.5 (A:4-85) Troponin C {Human (Homo sapiens) | 3e-05 | |
| d1jfja_ | 134 | a.39.1.5 (A:) EHCABP {Entamoeba (Entamoeba histoly | 8e-09 | |
| d1bjfa_ | 181 | a.39.1.5 (A:) Neurocalcin {Cow (Bos taurus) [TaxId | 8e-09 | |
| d1bjfa_ | 181 | a.39.1.5 (A:) Neurocalcin {Cow (Bos taurus) [TaxId | 7e-08 | |
| d2opoa1 | 81 | a.39.1.10 (A:6-86) Polcalcin Che a 3 {Pigweed (Che | 9e-09 | |
| d2opoa1 | 81 | a.39.1.10 (A:6-86) Polcalcin Che a 3 {Pigweed (Che | 0.003 | |
| d1avsa_ | 81 | a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) | 1e-08 | |
| d1avsa_ | 81 | a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) | 9e-05 | |
| d1fi5a_ | 81 | a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus), | 1e-08 | |
| d1fw4a_ | 65 | a.39.1.5 (A:) Calmodulin {Cow (Bos taurus) [TaxId: | 1e-08 | |
| d1cb1a_ | 78 | a.39.1.1 (A:) Calbindin D9K {Pig (Sus scrofa) [Tax | 2e-08 | |
| d2pq3a1 | 73 | a.39.1.5 (A:3-75) Calmodulin {Rattus norvegicus [T | 2e-08 | |
| d2pq3a1 | 73 | a.39.1.5 (A:3-75) Calmodulin {Rattus norvegicus [T | 2e-04 | |
| d1s6ca_ | 178 | a.39.1.5 (A:) Kchip1, Kv4 potassium channel-intera | 1e-07 | |
| d1g8ia_ | 187 | a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1 | 1e-07 | |
| d1g8ia_ | 187 | a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1 | 1e-06 | |
| d3c1va1 | 93 | a.39.1.2 (A:2-94) Calcyclin (S100) {Human (Homo sa | 2e-07 | |
| d1tiza_ | 67 | a.39.1.5 (A:) Calmodulin-related protein T21P5.17 | 2e-07 | |
| d1tiza_ | 67 | a.39.1.5 (A:) Calmodulin-related protein T21P5.17 | 5e-04 | |
| d1ggwa_ | 140 | a.39.1.5 (A:) Cdc4p {Fission yeast (Schizosaccharo | 2e-07 | |
| d1wlza1 | 83 | a.39.1.7 (A:229-311) DJ-1-binding protein, DJBP {H | 3e-07 | |
| d1jbaa_ | 189 | a.39.1.5 (A:) Guanylate cyclase activating protein | 4e-07 | |
| d1jbaa_ | 189 | a.39.1.5 (A:) Guanylate cyclase activating protein | 1e-04 | |
| d1qx2a_ | 76 | a.39.1.1 (A:) Calbindin D9K {Cow (Bos taurus) [Tax | 6e-07 | |
| d1fpwa_ | 190 | a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1 | 1e-06 | |
| d1fpwa_ | 190 | a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1 | 0.002 | |
| d2fcea1 | 61 | a.39.1.5 (A:84-144) Calmodulin {Cow (Bos taurus) [ | 1e-06 | |
| d1snla_ | 99 | a.39.1.7 (A:) Nucleobindin 1 (CALNUC) {Human (Homo | 4e-06 | |
| d1snla_ | 99 | a.39.1.7 (A:) Nucleobindin 1 (CALNUC) {Human (Homo | 3e-05 | |
| d1a4pa_ | 92 | a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapien | 8e-06 | |
| d2jxca1 | 95 | a.39.1.6 (A:121-215) Eps15 {Human (Homo sapiens) [ | 1e-05 | |
| d1xo5a_ | 180 | a.39.1.5 (A:) Calcium- and integrin-binding protei | 1e-05 | |
| d1xo5a_ | 180 | a.39.1.5 (A:) Calcium- and integrin-binding protei | 9e-04 | |
| d2zkmx1 | 170 | a.39.1.7 (X:142-311) Phospholipase C-beta-2 {Human | 1e-05 | |
| d2zkmx1 | 170 | a.39.1.7 (X:142-311) Phospholipase C-beta-2 {Human | 7e-04 | |
| d1zfsa1 | 93 | a.39.1.2 (A:1-93) Calcyclin (S100) {Rat (Rattus no | 1e-05 | |
| d1ksoa_ | 93 | a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapien | 3e-05 | |
| d1yuta1 | 98 | a.39.1.2 (A:1-98) Calcyclin (S100) {Human (Homo sa | 3e-05 | |
| d1c07a_ | 95 | a.39.1.6 (A:) Eps15 {Human (Homo sapiens) [TaxId: | 3e-05 | |
| d1omra_ | 201 | a.39.1.5 (A:) Recoverin {Cow (Bos taurus) [TaxId: | 4e-05 | |
| d1omra_ | 201 | a.39.1.5 (A:) Recoverin {Cow (Bos taurus) [TaxId: | 5e-04 | |
| d1fi6a_ | 92 | a.39.1.6 (A:) Reps1 {Mouse (Mus musculus) [TaxId: | 6e-05 | |
| d1xk4a1 | 87 | a.39.1.2 (A:1-87) Calcyclin (S100) {Human (Homo sa | 7e-05 | |
| d1e8aa_ | 87 | a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapien | 9e-05 | |
| d1psra_ | 100 | a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapien | 2e-04 | |
| d1k8ua_ | 89 | a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapien | 4e-04 | |
| d1iq3a_ | 110 | a.39.1.6 (A:) Pob1 {Human (Homo sapiens) [TaxId: 9 | 5e-04 | |
| d1qlsa_ | 95 | a.39.1.2 (A:) Calcyclin (S100) {Pig (Sus scrofa), | 0.002 | |
| d1j55a_ | 94 | a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapien | 0.003 | |
| d1qjta_ | 99 | a.39.1.6 (A:) Eps15 {Mouse (Mus musculus) [TaxId: | 0.003 | |
| d3cr5x1 | 90 | a.39.1.2 (X:0-89) Calcyclin (S100) {Cow (Bos tauru | 0.004 |
| >d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Titin, kinase domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 258 bits (661), Expect = 1e-83
Identities = 91/310 (29%), Positives = 159/310 (51%), Gaps = 9/310 (2%)
Query: 24 HYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQ 83
Y LGRG+FG+ + C E S+ + Y K + K + ++++EI I L ++
Sbjct: 6 KYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGT----DQVLVKKEISI-LNIARH 60
Query: 84 PNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYN-SERDAATVLRAIVNAVNVCHS 142
N++ ++E + ++ E G D+F+RI + +ER+ + + + A+ HS
Sbjct: 61 RNILHLHESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHS 120
Query: 143 MGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLR-RR 201
+ H D++PEN ++ +K+ +FG A + G +R + + Y APEV +
Sbjct: 121 HNIGHFDIRPENI-IYQTRRSSTIKIIEFGQARQLKPGDNFRLLFTAPEYYAPEVHQHDV 179
Query: 202 YGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVR 261
D+WS G ++Y+LLSG+ PF AET + + I+ E FD + + IS A D V
Sbjct: 180 VSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISIEAMDFVD 239
Query: 262 RMLTKDPKRRITAAQVLEHPWLRESGEASDDTSVILRMKQFRRMNKLKKLTIKVIVEYLP 321
R+L K+ K R+TA++ L+HPWL++ E T VI +K R + L K + ++V
Sbjct: 240 RLLVKERKSRMTASEALQHPWLKQKIERV-STKVIRTLKHRRYYHTLIKKDLNMVVSAAR 298
Query: 322 DEETQALKEK 331
A++ +
Sbjct: 299 ISCGGAIRSQ 308
|
| >d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Calmodulin-dependent protein kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 255 bits (652), Expect = 2e-82
Identities = 110/298 (36%), Positives = 171/298 (57%), Gaps = 6/298 (2%)
Query: 16 KAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQ 75
K ED+ Y F +LG G F L + T + A K IAKK + + EI
Sbjct: 2 KQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEG--KEGSMENEIA 59
Query: 76 IRLYLSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVN 135
+ L+ PN+V YE ++++M+L GG+LFDRI+ KG+ +ERDA+ ++ +++
Sbjct: 60 V-LHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLD 118
Query: 136 AVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAP 195
AV H +G++HRDLKPEN + S D+++ + ++DFG + + + G V G+ Y+AP
Sbjct: 119 AVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAP 178
Query: 196 EVLRRR-YGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISS 254
EVL ++ Y K +D WS GVI YILL G PPF+ E ++ IL+ E +FD+ W IS
Sbjct: 179 EVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISD 238
Query: 255 TAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASD--DTSVILRMKQFRRMNKLKK 310
+AKD +R ++ KDP++R T Q L+HPW+ SV ++K+ +K K+
Sbjct: 239 SAKDFIRHLMEKDPEKRFTCEQALQHPWIAGDTALDKNIHQSVSEQIKKNFAKSKWKQ 296
|
| >d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: gamma-subunit of glycogen phosphorylase kinase (Phk) species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 250 bits (640), Expect = 4e-81
Identities = 94/275 (34%), Positives = 146/275 (53%), Gaps = 16/275 (5%)
Query: 24 HYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDM------IRREIQIR 77
+Y +LGRG V C T + YA K I + ++ +E+ I
Sbjct: 4 NYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDIL 63
Query: 78 LYLSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAV 137
+SG PN+++ K TYE T +V +L + G+LFD + K SE++ ++RA++ +
Sbjct: 64 RKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVI 123
Query: 138 NVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEV 197
H + ++HRDLKPEN DD+ +K+TDFG + + G+ R++ G+ Y+APE+
Sbjct: 124 CALHKLNIVHRDLKPENILL---DDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEI 180
Query: 198 L-------RRRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWP 250
+ YGKE+D+WS GVI+Y LL+G PPFW + I+ G F + W
Sbjct: 181 IECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWD 240
Query: 251 SISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRE 285
S T KDLV R L P++R TA + L HP+ ++
Sbjct: 241 DYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQ 275
|
| >d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: Caenorhabditis elegans, pjk4 [TaxId: 6239]
Score = 248 bits (635), Expect = 2e-79
Identities = 92/317 (29%), Positives = 144/317 (45%), Gaps = 8/317 (2%)
Query: 18 YEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIR 77
++ V+ HY LG G FGV + TE +T +A K + ++ + +R+EIQ
Sbjct: 21 HDHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTP---HESDKETVRKEIQTM 77
Query: 78 LYLSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAK-GYNSERDAATVLRAIVNA 136
L P +V +ED+ + ++ E GG+LF+++ + SE +A +R +
Sbjct: 78 SVLR-HPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKG 136
Query: 137 VNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPE 196
+ H +H DLKPEN + + LK+ DFG + Q + G+ + APE
Sbjct: 137 LCHMHENNYVHLDLKPENI-MFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPE 195
Query: 197 VLR-RRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISST 255
V + G D+WS GV+ YILLSG+ PF E T + + + D + IS
Sbjct: 196 VAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISED 255
Query: 256 AKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASDDTSV-ILRMKQFRRMNKLKKLTIK 314
KD +R++L DP R+T Q LEHPWL D+ + R + R K K
Sbjct: 256 GKDFIRKLLLADPNTRMTIHQALEHPWLTPGNAPGRDSQIPSSRYTKIRDSIKTKYDAWP 315
Query: 315 VIVEYLPDEETQALKEK 331
+ L + K
Sbjct: 316 EPLPPLGRISNYSSLRK 332
|
| >d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]
Score = 248 bits (634), Expect = 3e-79
Identities = 89/289 (30%), Positives = 147/289 (50%), Gaps = 9/289 (3%)
Query: 24 HYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQ 83
+Y LG G FGV + C E +T R + K I + ++ EI I L
Sbjct: 30 YYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTP---YPLDKYTVKNEISIMNQLH-H 85
Query: 84 PNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYN-SERDAATVLRAIVNAVNVCHS 142
P ++ +ED+ + +++E GG+LFDRI A+ Y SE + +R + H
Sbjct: 86 PKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHE 145
Query: 143 MGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLRRR- 201
++H D+KPEN + +K+ DFG A ++ + + + APE++ R
Sbjct: 146 HSIVHLDIKPENI-MCETKKASSVKIIDFGLATKLNPDEIVKVTTATAEFAAPEIVDREP 204
Query: 202 YGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVR 261
G D+W+ GV+ Y+LLSG+ PF E T + + + +FD D + S+S AKD ++
Sbjct: 205 VGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEAKDFIK 264
Query: 262 RMLTKDPKRRITAAQVLEHPWLRESGEASDDTSVILRMKQFRRMNKLKK 310
+L K+P++R+T LEHPWL+ G+ S+ TS I + + K+K+
Sbjct: 265 NLLQKEPRKRLTVHDALEHPWLK--GDHSNLTSRIPSSRYNKIRQKIKE 311
|
| >d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Aurora-related kinase 1 (aurora-2) species: Human (Homo sapiens) [TaxId: 9606]
Score = 234 bits (599), Expect = 4e-75
Identities = 81/264 (30%), Positives = 135/264 (51%), Gaps = 10/264 (3%)
Query: 24 HYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQ 83
+ GR LG+G+FG YL E + A K + K + +RRE++I
Sbjct: 7 DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEI-QSHLRH 65
Query: 84 PNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSM 143
PN++ + D T V++++E G ++ + E+ AT + + NA++ CHS
Sbjct: 66 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 125
Query: 144 GVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLR-RRY 202
V+HRD+KPEN + LK+ DFG ++ + + G+ Y+ PE++ R +
Sbjct: 126 RVIHRDIKPEN---LLLGSAGELKIADFGWSVHAPSSR-RTTLCGTLDYLPPEMIEGRMH 181
Query: 203 GKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRR 262
+++D+WS GV+ Y L G PPF A T + TY I + E F ++ A+DL+ R
Sbjct: 182 DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF----PDFVTEGARDLISR 237
Query: 263 MLTKDPKRRITAAQVLEHPWLRES 286
+L +P +R +VLEHPW+ +
Sbjct: 238 LLKHNPSQRPMLREVLEHPWITAN 261
|
| >d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase activated protein kinase 2, mapkap2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 236 bits (602), Expect = 1e-74
Identities = 96/332 (28%), Positives = 163/332 (49%), Gaps = 29/332 (8%)
Query: 9 QRDPILGKAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAEND 68
+++ I+ + ++LG G G T +A K + P
Sbjct: 5 KKNAIIDD-------YKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCP-------- 49
Query: 69 MIRREIQIRLYLSGQPNVVEFKSTYED----ETAVHVVMELCEGGDLFDRIIAKGYN--S 122
RRE+++ S P++V YE+ + +VME +GG+LF RI +G +
Sbjct: 50 KARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFT 109
Query: 123 ERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQV 182
ER+A+ ++++I A+ HS+ + HRD+KPEN + S+ NA+LK+TDFG A
Sbjct: 110 EREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNS 169
Query: 183 YRDIVGSGFYIAPEVLR-RRYGKEIDIWSAGVILYILLSGVPPFWA----ETKKGTYDAI 237
+ +Y+APEVL +Y K D+WS GVI+YILL G PPF++ G I
Sbjct: 170 LTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRI 229
Query: 238 LQGEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASD---DTS 294
G+ +F W +S K L+R +L +P +R+T + + HPW+ +S + TS
Sbjct: 230 RMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTS 289
Query: 295 VILRMKQFRRMNKLKKLTIKVIVEYLPDEETQ 326
+L+ + R + +++T + + E+ +
Sbjct: 290 RVLKEDKERWEDVKEEMTSALATMRVDYEQIK 321
|
| >d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Death-associated protein kinase, Dap species: Human (Homo sapiens) [TaxId: 9606]
Score = 230 bits (586), Expect = 9e-73
Identities = 103/272 (37%), Positives = 153/272 (56%), Gaps = 6/272 (2%)
Query: 19 EDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKK---PKMRLAENDMIRREIQ 75
E+V +Y G LG GQF V C E ST YA K I K+ R + I RE+
Sbjct: 6 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 65
Query: 76 IRLYLSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVN 135
I + PNV+ YE++T V +++EL GG+LFD + K +E +A L+ I+N
Sbjct: 66 ILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILN 124
Query: 136 AVNVCHSMGVMHRDLKPENFSFISRDD-NALLKVTDFGSALLFEEGQVYRDIVGSGFYIA 194
V HS+ + H DLKPEN + R+ +K+ DFG A + G +++I G+ ++A
Sbjct: 125 GVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVA 184
Query: 195 PEVLR-RRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSIS 253
PE++ G E D+WS GVI YILLSG PF +TK+ T + +F+ + + + S
Sbjct: 185 PEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTS 244
Query: 254 STAKDLVRRMLTKDPKRRITAAQVLEHPWLRE 285
+ AKD +RR+L KDPK+R+T L+HPW++
Sbjct: 245 ALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKP 276
|
| >d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell cycle checkpoint kinase chk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 227 bits (579), Expect = 5e-72
Identities = 77/267 (28%), Positives = 130/267 (48%), Gaps = 12/267 (4%)
Query: 24 HYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQ 83
+ + LG G +G L T A K + K + EN I++EI I L+
Sbjct: 6 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN--IKKEICINKMLN-H 62
Query: 84 PNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSM 143
NVV+F + ++ +E C GG+LFDRI E DA ++ V H +
Sbjct: 63 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 122
Query: 144 GVMHRDLKPENFSFISRDDNALLKVTDFGSALLF---EEGQVYRDIVGSGFYIAPEVLRR 200
G+ HRD+KPEN D+ LK++DFG A +F ++ + G+ Y+APE+L+R
Sbjct: 123 GITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 179
Query: 201 R--YGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKD 258
R + + +D+WS G++L +L+G P+ + + + + + +PW I S
Sbjct: 180 REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYL-NPWKKIDSAPLA 238
Query: 259 LVRRMLTKDPKRRITAAQVLEHPWLRE 285
L+ ++L ++P RIT + + W +
Sbjct: 239 LLHKILVENPSARITIPDIKKDRWYNK 265
|
| >d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: pak1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 226 bits (576), Expect = 3e-71
Identities = 76/285 (26%), Positives = 137/285 (48%), Gaps = 11/285 (3%)
Query: 19 EDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRL 78
D Y +G+G G Y + +T + A + + + + + ++I EI + +
Sbjct: 16 GDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQ---QQPKKELIINEILV-M 71
Query: 79 YLSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVN 138
+ PN+V + +Y + VVME GG L D ++ + E A V R + A+
Sbjct: 72 RENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTD-VVTETCMDEGQIAAVCRECLQALE 130
Query: 139 VCHSMGVMHRDLKPENFSFISRDDNALLKVTDFG-SALLFEEGQVYRDIVGSGFYIAPEV 197
HS V+HRD+K +N + +K+TDFG A + E +VG+ +++APEV
Sbjct: 131 FLHSNQVIHRDIKSDNILL---GMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEV 187
Query: 198 LRRR-YGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTA 256
+ R+ YG ++DIWS G++ ++ G PP+ E I + +S+
Sbjct: 188 VTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGT-PELQNPEKLSAIF 246
Query: 257 KDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASDDTSVILRMKQ 301
+D + R L D ++R +A ++L+H +L+ + S T +I K+
Sbjct: 247 RDFLNRCLDMDVEKRGSAKELLQHQFLKIAKPLSSLTPLIAAAKE 291
|
| >d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: 3-phosphoinositide dependent protein kinase-1 Pdk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 225 bits (575), Expect = 3e-71
Identities = 76/272 (27%), Positives = 133/272 (48%), Gaps = 18/272 (6%)
Query: 24 HYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQ 83
+ FG++LG G F L E +T+R YA K + K+ ++ + + RE + L
Sbjct: 9 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-H 67
Query: 84 PNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSM 143
P V+ T++D+ ++ + + G+L I G E IV+A+ H
Sbjct: 68 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 127
Query: 144 GVMHRDLKPENFSFISRDDNALLKVTDFGSALLF---EEGQVYRDIVGSGFYIAPEVLR- 199
G++HRDLKPEN I +++ +++TDFG+A + + VG+ Y++PE+L
Sbjct: 128 GIIHRDLKPEN---ILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTE 184
Query: 200 RRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDL 259
+ K D+W+ G I+Y L++G+PPF A + + I++ E DF A+DL
Sbjct: 185 KSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDF----PEKFFPKARDL 240
Query: 260 VRRMLTKDPKRRITAAQ------VLEHPWLRE 285
V ++L D +R+ + + HP+
Sbjct: 241 VEKLLVLDATKRLGCEEMEGYGPLKAHPFFES 272
|
| >d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine protein kinase TAO2 species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 225 bits (575), Expect = 6e-71
Identities = 75/311 (24%), Positives = 131/311 (42%), Gaps = 16/311 (5%)
Query: 11 DPILGKAY--EDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAEND 68
DP + + + +D + R +G G FG Y + + A K ++ K +
Sbjct: 1 DPDVAELFFKDDPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQ 60
Query: 69 MIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAAT 128
I +E++ L PN ++++ Y E +VME C G + K E + A
Sbjct: 61 DIIKEVRFLQKLR-HPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAA 119
Query: 129 VLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVG 188
V + + HS ++HRD+K N I + L+K+ DFGSA + + VG
Sbjct: 120 VTHGALQGLAYLHSHNMIHRDVKAGN---ILLSEPGLVKLGDFGSASIMAPANSF---VG 173
Query: 189 SGFYIAPEVLR----RRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDF 244
+ +++APEV+ +Y ++D+WS G+ L PP + I Q E
Sbjct: 174 TPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNE--S 231
Query: 245 DTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASDDTSVILRMKQF-R 303
S ++ V L K P+ R T+ +L+H ++ + +I R K R
Sbjct: 232 PALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRERPPTVIMDLIQRTKDAVR 291
Query: 304 RMNKLKKLTIK 314
++ L+ +K
Sbjct: 292 ELDNLQYRKMK 302
|
| >d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: STE20-like serine/threonine-protein kinase, SLK species: Human (Homo sapiens) [TaxId: 9606]
Score = 218 bits (556), Expect = 2e-68
Identities = 71/273 (26%), Positives = 116/273 (42%), Gaps = 16/273 (5%)
Query: 24 HYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQ 83
+ LG G FG Y T+ A K I K + L + EI I
Sbjct: 13 FWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELED---YMVEIDILASCD-H 68
Query: 84 PNVVEFKSTYEDETAVHVVMELCEGGDLFDRII-AKGYNSERDAATVLRAIVNAVNVCHS 142
PN+V+ + E + +++E C GG + ++ + +E V + ++A+N H
Sbjct: 69 PNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHD 128
Query: 143 MGVMHRDLKPENFSFISRDDNALLKVTDFG-SALLFEEGQVYRDIVGSGFYIAPEVL--- 198
++HRDLK N I + +K+ DFG SA Q +G+ +++APEV+
Sbjct: 129 NKIIHRDLKAGN---ILFTLDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCE 185
Query: 199 ---RRRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISST 255
R Y + D+WS G+ L + PP I + E P SS
Sbjct: 186 TSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQP-SRWSSN 244
Query: 256 AKDLVRRMLTKDPKRRITAAQVLEHPWLRESGE 288
KD +++ L K+ R T +Q+L+HP++
Sbjct: 245 FKDFLKKCLEKNVDARWTTSQLLQHPFVTVDSN 277
|
| >d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase C, theta type species: Human (Homo sapiens) [TaxId: 9606]
Score = 214 bits (546), Expect = 1e-66
Identities = 70/264 (26%), Positives = 122/264 (46%), Gaps = 10/264 (3%)
Query: 25 YFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQP 84
+ +MLG+G FG +L TN+ +A K++ K + + + E ++ P
Sbjct: 4 FILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHP 63
Query: 85 NVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMG 144
+ T++ + + VME GGDL I + A I+ + HS G
Sbjct: 64 FLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKG 123
Query: 145 VMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEG-QVYRDIVGSGFYIAPEVLR-RRY 202
+++RDLK +N I D + +K+ DFG G G+ YIAPE+L ++Y
Sbjct: 124 IVYRDLKLDN---ILLDKDGHIKIADFGMCKENMLGDAKTNTFCGTPDYIAPEILLGQKY 180
Query: 203 GKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRR 262
+D WS GV+LY +L G PF + ++ + +I + + AKDL+ +
Sbjct: 181 NHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFY----PRWLEKEAKDLLVK 236
Query: 263 MLTKDPKRRITAA-QVLEHPWLRE 285
+ ++P++R+ + +HP RE
Sbjct: 237 LFVREPEKRLGVRGDIRQHPLFRE 260
|
| >d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine-protein kinase Nek2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 211 bits (539), Expect = 5e-66
Identities = 78/272 (28%), Positives = 123/272 (45%), Gaps = 21/272 (7%)
Query: 25 YFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQP 84
Y +G G +G S + K + M AE M+ E+ + L P
Sbjct: 6 YEVLYTIGTGSYGRCQKIRRKSDGKILVWKEL-DYGSMTEAEKQMLVSEVNLLRELK-HP 63
Query: 85 NVVEFKSTYEDET--AVHVVMELCEGGDLFDRIIA----KGYNSERDAATVLRAIVNAVN 138
N+V + D T +++VME CEGGDL I + Y E V+ + A+
Sbjct: 64 NIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALK 123
Query: 139 VCHSMG-----VMHRDLKPENFSFISRDDNALLKVTDFGSA-LLFEEGQVYRDIVGSGFY 192
CH V+HRDLKP N + D +K+ DFG A +L + + VG+ +Y
Sbjct: 124 ECHRRSDGGHTVLHRDLKPAN---VFLDGKQNVKLGDFGLARILNHDTSFAKAFVGTPYY 180
Query: 193 IAPEVLRRR-YGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPS 251
++PE + R Y ++ DIWS G +LY L + +PPF A ++K I +G+
Sbjct: 181 MSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRR---IPYR 237
Query: 252 ISSTAKDLVRRMLTKDPKRRITAAQVLEHPWL 283
S +++ RML R + ++LE+P +
Sbjct: 238 YSDELNEIITRMLNLKDYHRPSVEEILENPLI 269
|
| >d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase wnk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 209 bits (532), Expect = 4e-65
Identities = 50/267 (18%), Positives = 106/267 (39%), Gaps = 14/267 (5%)
Query: 25 YFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQP 84
F +GRG F Y + T A + + K+ +E + E ++ L P
Sbjct: 11 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCEL-QDRKLTKSERQRFKEEAEM-LKGLQHP 68
Query: 85 NVVEFKSTYED----ETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVC 140
N+V F ++E + + +V EL G L + + + R I+ +
Sbjct: 69 NIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFL 128
Query: 141 HSMG--VMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVL 198
H+ ++HRDLK +N +K+ D G A L + ++G+ ++APE+
Sbjct: 129 HTRTPPIIHRDLKCDNIFI--TGPTGSVKIGDLGLATLKR-ASFAKAVIGTPEFMAPEMY 185
Query: 199 RRRYGKEIDIWSAGVILYILLSGVPPFW-AETKKGTYDAILQGEIDFDTDPWPSISSTAK 257
+Y + +D+++ G+ + + + P+ + Y + G K
Sbjct: 186 EEKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPA--SFDKVAIPEVK 243
Query: 258 DLVRRMLTKDPKRRITAAQVLEHPWLR 284
+++ + ++ R + +L H + +
Sbjct: 244 EIIEGCIRQNKDERYSIKDLLNHAFFQ 270
|
| >d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 205 bits (522), Expect = 5e-63
Identities = 84/268 (31%), Positives = 131/268 (48%), Gaps = 16/268 (5%)
Query: 24 HYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQ 83
+ R LG G FG +L R YA K + K+ +RL + + E + L +
Sbjct: 5 DFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLM-LSIVTH 63
Query: 84 PNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSM 143
P ++ T++D + ++M+ EGG+LF + A + A+ HS
Sbjct: 64 PFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSK 123
Query: 144 GVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLR-RRY 202
+++RDLKPEN I D N +K+TDFG A + V + G+ YIAPEV+ + Y
Sbjct: 124 DIIYRDLKPEN---ILLDKNGHIKITDFGFAKYVPD--VTYTLCGTPDYIAPEVVSTKPY 178
Query: 203 GKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRR 262
K ID WS G+++Y +L+G PF+ TY+ IL E+ F P + KDL+ R
Sbjct: 179 NKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRF----PPFFNEDVKDLLSR 234
Query: 263 MLTKDPKRRI-----TAAQVLEHPWLRE 285
++T+D +R+ V HPW +E
Sbjct: 235 LITRDLSQRLGNLQNGTEDVKNHPWFKE 262
|
| >d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Proto-oncogene serine/threonine-protein kinase Pim-1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 203 bits (518), Expect = 6e-63
Identities = 80/269 (29%), Positives = 126/269 (46%), Gaps = 20/269 (7%)
Query: 24 HYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKK---PKMRLAENDMIRREIQIRLYL 80
Y G +LG G FG Y S N P A K + K L + E+ + +
Sbjct: 5 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 64
Query: 81 SGQ-PNVVEFKSTYEDETAVHVVMELCEGG-DLFDRIIAKGYNSERDAATVLRAIVNAVN 138
S V+ +E + +++E E DLFD I +G E A + ++ AV
Sbjct: 65 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 124
Query: 139 VCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVL 198
CH+ GV+HRD+K EN + LK+ DFGS L ++ VY D G+ Y PE +
Sbjct: 125 HCHNCGVLHRDIKDENILI--DLNRGELKLIDFGSGALLKD-TVYTDFDGTRVYSPPEWI 181
Query: 199 R--RRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTA 256
R R +G+ +WS G++LY ++ G PF + + I++G++ F +SS
Sbjct: 182 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFR----QRVSSEC 231
Query: 257 KDLVRRMLTKDPKRRITAAQVLEHPWLRE 285
+ L+R L P R T ++ HPW+++
Sbjct: 232 QHLIRWCLALRPSDRPTFEEIQNHPWMQD 260
|
| >d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 204 bits (519), Expect = 2e-62
Identities = 66/305 (21%), Positives = 114/305 (37%), Gaps = 49/305 (16%)
Query: 24 HYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQ 83
+ LG G GV + + + A K I +++ A + I RE+Q+ L+
Sbjct: 7 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLI--HLEIKPAIRNQIIRELQV-LHECNS 63
Query: 84 PNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSM 143
P +V F + + + + ME +GG L + G E+ V A++ +
Sbjct: 64 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREK 123
Query: 144 -GVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLR-RR 201
+MHRD+KP N I + +K+ DFG + + VG+ Y++PE L+
Sbjct: 124 HKIMHRDVKPSN---ILVNSRGEIKLCDFGVSGQLIDSMAN-SFVGTRSYMSPERLQGTH 179
Query: 202 YGKEIDIWSAGVILYILLSGVPPFWAETKK---GTYDAILQGEIDFDTD----------- 247
Y + DIWS G+ L + G P K + ++G+
Sbjct: 180 YSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSS 239
Query: 248 --------------------------PWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHP 281
P S +D V + L K+P R Q++ H
Sbjct: 240 YGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHA 299
Query: 282 WLRES 286
+++ S
Sbjct: 300 FIKRS 304
|
| >d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Mycobacterial protein kinase PknB, catalytic domain species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 201 bits (512), Expect = 4e-62
Identities = 61/267 (22%), Positives = 109/267 (40%), Gaps = 7/267 (2%)
Query: 24 HYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQ 83
Y G +LG G +L + +R A K + + RRE Q
Sbjct: 8 RYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQN-AAALNH 66
Query: 84 PNVVEFKSTYEDETA----VHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNV 139
P +V T E ET ++VME +G L D + +G + + A V+ A+N
Sbjct: 67 PAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNF 126
Query: 140 CHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYR-DIVGSGFYIAPEVL 198
H G++HRD+KP N + + ++ + ++G+ Y++PE
Sbjct: 127 SHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQA 186
Query: 199 R-RRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAK 257
R D++S G +LY +L+G PPF ++ ++ + + +S+
Sbjct: 187 RGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLSADLD 246
Query: 258 DLVRRMLTKDPKRRITAAQVLEHPWLR 284
+V + L K+P+ R A + +R
Sbjct: 247 AVVLKALAKNPENRYQTAAEMRADLVR 273
|
| >d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: G-protein coupled receptor kinase 2 species: Cow (Bos taurus) [TaxId: 9913]
Score = 203 bits (516), Expect = 1e-61
Identities = 72/271 (26%), Positives = 120/271 (44%), Gaps = 14/271 (5%)
Query: 24 HYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQI--RLYLS 81
+ R++GRG FG Y C + T + YA K + KK + E + +
Sbjct: 5 DFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTG 64
Query: 82 GQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCH 141
P +V + + +++L GGDL + G SE D I+ + H
Sbjct: 65 DCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMH 124
Query: 142 SMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLRR- 200
+ V++RDLKP N D++ ++++D G A F + + + VG+ Y+APEVL++
Sbjct: 125 NRFVVYRDLKPANILL---DEHGHVRISDLGLACDFSKKKPHA-SVGTHGYMAPEVLQKG 180
Query: 201 -RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDL 259
Y D +S G +L+ LL G PF K + I + + + S S + L
Sbjct: 181 VAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKH-EIDRMTLTMAVELPDSFSPELRSL 239
Query: 260 VRRMLTKDPKRRIT-----AAQVLEHPWLRE 285
+ +L +D RR+ A +V E P+ R
Sbjct: 240 LEGLLQRDVNRRLGCLGRGAQEVKESPFFRS 270
|
| >d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Pkb kinase (Akt-2) species: Human (Homo sapiens) [TaxId: 9606]
Score = 199 bits (507), Expect = 1e-60
Identities = 81/269 (30%), Positives = 133/269 (49%), Gaps = 15/269 (5%)
Query: 24 HYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQ 83
+ + ++LG+G FG L E +T R YA K + K+ + E E ++ L +
Sbjct: 6 DFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRV-LQNTRH 64
Query: 84 PNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSM 143
P + K ++ + VME GG+LF + + +E A IV+A+ HS
Sbjct: 65 PFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSR 124
Query: 144 GVMHRDLKPENFSFISRDDNALLKVTDFGSA-LLFEEGQVYRDIVGSGFYIAPEVLRR-R 201
V++RD+K EN D + +K+TDFG +G + G+ Y+APEVL
Sbjct: 125 DVVYRDIKLENLML---DKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDND 181
Query: 202 YGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVR 261
YG+ +D W GV++Y ++ G PF+ + + ++ IL EI F ++S AK L+
Sbjct: 182 YGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRF----PRTLSPEAKSLLA 237
Query: 262 RMLTKDPKRRI-----TAAQVLEHPWLRE 285
+L KDPK+R+ A +V+EH +
Sbjct: 238 GLLKKDPKQRLGGGPSDAKEVMEHRFFLS 266
|
| >d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 7, CDK7 species: Human (Homo sapiens) [TaxId: 9606]
Score = 196 bits (498), Expect = 1e-59
Identities = 69/286 (24%), Positives = 112/286 (39%), Gaps = 33/286 (11%)
Query: 29 RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAE--NDMIRREIQIRLYLSGQPNV 86
LG GQF Y + +TN+ A K I + + N REI++ LS PN+
Sbjct: 4 DFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELS-HPNI 62
Query: 87 VEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVM 146
+ + ++ + +V + E + + + + H ++
Sbjct: 63 IGLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWIL 122
Query: 147 HRDLKPENFSFISRDDNALLKVTDFGSALLFEEG-QVYRDIVGSGFYIAPEVLR--RRYG 203
HRDLKP N + D+N +LK+ DFG A F + Y V + +Y APE+L R YG
Sbjct: 123 HRDLKPNN---LLLDENGVLKLADFGLAKSFGSPNRAYTHQVVTRWYRAPELLFGARMYG 179
Query: 204 KEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWP------------- 250
+D+W+ G IL LL VP ++ I + + WP
Sbjct: 180 VGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKS 239
Query: 251 -----------SISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRE 285
+ DL++ + +P RITA Q L+ +
Sbjct: 240 FPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFSN 285
|
| >d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Ribosomal protein S6 kinase alpha 5, Msk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 194 bits (493), Expect = 9e-59
Identities = 78/278 (28%), Positives = 148/278 (53%), Gaps = 17/278 (6%)
Query: 22 MLHYFFGRMLGRGQFGVSYLC---TENSTNRPYACKSIAKKPKMRLAEN-DMIRREIQIR 77
+ ++ ++LG G +G +L + + T + YA K + K ++ A+ + R E Q+
Sbjct: 23 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVL 82
Query: 78 LYLSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAV 137
++ P +V ++ ET +H++++ GG+LF + + +E + + IV A+
Sbjct: 83 EHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLAL 142
Query: 138 NVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFE--EGQVYRDIVGSGFYIAP 195
H +G+++RD+K EN I D N + +TDFG + F E + D G+ Y+AP
Sbjct: 143 EHLHKLGIIYRDIKLEN---ILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAP 199
Query: 196 EVLR---RRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSI 252
+++R + K +D WS GV++Y LL+G PF + +K + I + + + +
Sbjct: 200 DIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQEM 259
Query: 253 SSTAKDLVRRMLTKDPKRRI-----TAAQVLEHPWLRE 285
S+ AKDL++R+L KDPK+R+ A ++ EH + ++
Sbjct: 260 SALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQK 297
|
| >d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: B-Raf kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 187 bits (477), Expect = 8e-57
Identities = 55/267 (20%), Positives = 103/267 (38%), Gaps = 19/267 (7%)
Query: 24 HYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQ 83
G+ +G G FG Y + A K + + + E+ + L +
Sbjct: 9 QITVGQRIGSGSFGTVYKGK---WHGDVAVKML-NVTAPTPQQLQAFKNEVGV-LRKTRH 63
Query: 84 PNVVEFKSTYEDETAVHVVMELCEGGDLFDRI-IAKGYNSERDAATVLRAIVNAVNVCHS 142
N++ F Y + +V + CEG L+ + I + + R ++ H+
Sbjct: 64 VNILLFMG-YSTAPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA 122
Query: 143 MGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEG---QVYRDIVGSGFYIAPEVLR 199
++HRDLK N I ++ +K+ DFG A + + + GS ++APEV+R
Sbjct: 123 KSIIHRDLKSNN---IFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIR 179
Query: 200 ----RRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDP--WPSIS 253
Y + D+++ G++LY L++G P+ + ++ +
Sbjct: 180 MQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCP 239
Query: 254 STAKDLVRRMLTKDPKRRITAAQVLEH 280
K L+ L K R Q+L
Sbjct: 240 KAMKRLMAECLKKKRDERPLFPQILAS 266
|
| >d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Glycogen synthase kinase-3 beta (Gsk3b) species: Human (Homo sapiens) [TaxId: 9606]
Score = 190 bits (482), Expect = 8e-57
Identities = 69/297 (23%), Positives = 112/297 (37%), Gaps = 46/297 (15%)
Query: 25 YFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQP 84
Y +++G G FGV Y + A K + + + + RE+QI L
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK-------NRELQIMRKLD-HC 73
Query: 85 NVVEFKSTY------EDETAVHVVMELCEGG---DLFDRIIAKGYNSERDAATVLRAIVN 135
N+V + + +DE +++V++ AK + +
Sbjct: 74 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 133
Query: 136 AVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAP 195
++ HS G+ HRD+KP+N D A+LK+ DFGSA G+ + S +Y AP
Sbjct: 134 SLAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAP 191
Query: 196 EVLRRR--YGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQG------------- 240
E++ Y ID+WSAG +L LL G P F ++ I++
Sbjct: 192 ELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN 251
Query: 241 ------------EIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRE 285
+ P A L R+L P R+T + H + E
Sbjct: 252 PNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDE 308
|
| >d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase Erk2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 188 bits (479), Expect = 2e-56
Identities = 86/351 (24%), Positives = 133/351 (37%), Gaps = 50/351 (14%)
Query: 20 DVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLY 79
DV Y +G G +G+ +N A K I+ + REI+I L
Sbjct: 5 DVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQR--TLREIKILLR 62
Query: 80 LSGQPNVVEFK-----STYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIV 134
N++ T E V++V L +++ + S L I+
Sbjct: 63 FR-HENIIGINDIIRAPTIEQMKDVYLVTHLMGAD--LYKLLKTQHLSNDHICYFLYQIL 119
Query: 135 NAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRD----IVGSG 190
+ HS V+HRDLKP N + LK+ DFG A + + + V +
Sbjct: 120 RGLKYIHSANVLHRDLKPSNLLL---NTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 176
Query: 191 FYIAPEVLRRR--YGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDP 248
+Y APE++ Y K IDIWS G IL +LS P F + + IL +
Sbjct: 177 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQED 236
Query: 249 W---------------------------PSISSTAKDLVRRMLTKDPKRRITAAQVLEHP 281
P+ S A DL+ +MLT +P +RI Q L HP
Sbjct: 237 LNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHP 296
Query: 282 WLRESGEASDDTSVILRMKQFRRMNKLKKLTIKVIVEYLPDEETQALKEKF 332
+L + + SD+ K ++ L K +K ++ EET + +
Sbjct: 297 YLEQYYDPSDEPIAEAPFKFDMELDDLPKEKLKELI----FEETARFQPGY 343
|
| >d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 9, CDK9 species: Human (Homo sapiens) [TaxId: 9606]
Score = 186 bits (473), Expect = 7e-56
Identities = 68/311 (21%), Positives = 115/311 (36%), Gaps = 48/311 (15%)
Query: 24 HYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQ 83
Y +G+G FG + T + A K + + REI+I L L
Sbjct: 11 KYEKLAKIGQGTFGEVFKARHRKTGQKVALKKV-LMENEKEGFPITALREIKI-LQLLKH 68
Query: 84 PNVVEFKSTYEDETA--------VHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVN 135
NVV + + +++V + CE + + V++ ++N
Sbjct: 69 ENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLN 128
Query: 136 AVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQ-----VYRDIVGSG 190
+ H ++HRD+K N + + +LK+ DFG A F + Y + V +
Sbjct: 129 GLYYIHRNKILHRDMKAAN---VLITRDGVLKLADFGLARAFSLAKNSQPNRYTNRVVTL 185
Query: 191 FYIAPEVLR--RRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDP 248
+Y PE+L R YG ID+W AG I+ + + P T++ I Q +
Sbjct: 186 WYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEV 245
Query: 249 WPSI----------------------------SSTAKDLVRRMLTKDPKRRITAAQVLEH 280
WP++ A DL+ ++L DP +RI + L H
Sbjct: 246 WPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNH 305
Query: 281 PWLRESGEASD 291
+ SD
Sbjct: 306 DFFWSDPMPSD 316
|
| >d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase CK2, alpha subunit species: Rattus norvegicus [TaxId: 10116]
Score = 183 bits (465), Expect = 2e-54
Identities = 72/300 (24%), Positives = 124/300 (41%), Gaps = 49/300 (16%)
Query: 24 HYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQ 83
Y R LGRG++ + + N K ++ + I+REI+I L G
Sbjct: 36 DYQLVRKLGRGKYSEVFEAINITNNEKVVVK------ILKPVKKKKIKREIKILENLRGG 89
Query: 84 PNVVEFKSTYEDETA--VHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCH 141
PN++ +D + +V E D ++ D + I+ A++ CH
Sbjct: 90 PNIITLADIVKDPVSRTPALVFEHVNNTDFKQLY---QTLTDYDIRFYMYEILKALDYCH 146
Query: 142 SMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLR-- 199
SMG+MHRD+KP N ++ L++ D+G A + GQ Y V S ++ PE+L
Sbjct: 147 SMGIMHRDVKPHNVMI--DHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDY 204
Query: 200 RRYGKEIDIWSAGVILYILLSGVPPFWAET--------------KKGTYDAILQGEIDFD 245
+ Y +D+WS G +L ++ PF+ + YD I + I+ D
Sbjct: 205 QMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELD 264
Query: 246 --------------------TDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRE 285
++ +S A D + ++L D + R+TA + +EHP+
Sbjct: 265 PRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYT 324
|
| >d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: (Plasmodium falciparum) [TaxId: 5833]
Score = 181 bits (460), Expect = 2e-54
Identities = 77/292 (26%), Positives = 122/292 (41%), Gaps = 34/292 (11%)
Query: 22 MLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLS 81
M Y +G G +GV Y +N+ +A K I + K REI I L
Sbjct: 1 MEKYHGLEKIGEGTYGVVYKA-QNNYGETFALKKI-RLEKEDEGIPSTTIREISILKELK 58
Query: 82 GQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCH 141
N+V+ + + +V E + + +G A + L ++N + CH
Sbjct: 59 -HSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCH 117
Query: 142 SMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLF-EEGQVYRDIVGSGFYIAPEVLR- 199
V+HRDLKP+N + LK+ DFG A F + Y + + +Y AP+VL
Sbjct: 118 DRRVLHRDLKPQNLLI---NREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMG 174
Query: 200 -RRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSI------ 252
++Y IDIWS G I +++G P F ++ I + ++ WP++
Sbjct: 175 SKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKY 234
Query: 253 -------------------SSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRE 285
+ DL+ +ML DP +RITA Q LEH + +E
Sbjct: 235 DPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKE 286
|
| >d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK5 species: Human (Homo sapiens) [TaxId: 9606]
Score = 181 bits (460), Expect = 2e-54
Identities = 67/293 (22%), Positives = 110/293 (37%), Gaps = 34/293 (11%)
Query: 22 MLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLS 81
M Y +G G +G + T+ A K + + REI + L
Sbjct: 1 MQKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRV-RLDDDDEGVPSSALREICLLKELK 59
Query: 82 GQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCH 141
N+V + + +V E C+ G + L ++ + CH
Sbjct: 60 H-KNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCH 118
Query: 142 SMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLF-EEGQVYRDIVGSGFYIAPEVLRR 200
S V+HRDLKP+N + K+ +FG A F + Y V + +Y P+VL
Sbjct: 119 SRNVLHRDLKPQNLLINRNGEL---KLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFG 175
Query: 201 R--YGKEIDIWSAGVILYILLSG-VPPFWAETKKGTYDAILQGEIDFDTDPWPS------ 251
Y ID+WSAG I L + P F I + + WPS
Sbjct: 176 AKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPD 235
Query: 252 -------------------ISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRE 285
+++T +DL++ +L +P +RI+A + L+HP+ +
Sbjct: 236 YKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSD 288
|
| >d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK6 species: Human (Homo sapiens) [TaxId: 9606]
Score = 180 bits (458), Expect = 9e-54
Identities = 67/295 (22%), Positives = 114/295 (38%), Gaps = 37/295 (12%)
Query: 24 HYFFGRMLGRGQFGVSYLCTE-NSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSG 82
Y +G G +G + + + R A K + + RE+ + +L
Sbjct: 8 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRV-RVQTGEEGMPLSTIREVAVLRHLET 66
Query: 83 Q--PNVVEFK-----STYEDETAVHVVMELCEGGDL-FDRIIAKGYNSERDAATVLRAIV 134
PNVV S + ET + +V E + + + + ++ ++
Sbjct: 67 FEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLL 126
Query: 135 NAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIA 194
++ HS V+HRDLKP+N I + +K+ DFG A ++ +V + +Y A
Sbjct: 127 RGLDFLHSHRVVHRDLKPQN---ILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRA 183
Query: 195 PEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWP--- 250
PEVL + Y +D+WS G I + P F + IL + WP
Sbjct: 184 PEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDV 243
Query: 251 --------------------SISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRE 285
I KDL+ + LT +P +RI+A L HP+ ++
Sbjct: 244 ALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQD 298
|
| >d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38-gamma species: Human (Homo sapiens) [TaxId: 9606]
Score = 181 bits (461), Expect = 1e-53
Identities = 73/347 (21%), Positives = 138/347 (39%), Gaps = 48/347 (13%)
Query: 14 LGKAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRRE 73
+ K +V Y + +G G +G + T A K + +P RE
Sbjct: 9 VTKTAWEVRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKL-YRPFQSELFAKRAYRE 67
Query: 74 IQIRLYLSGQPNVVEF------KSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAA 127
+++ ++ NV+ T +D T ++VM G +++ E
Sbjct: 68 LRLLKHMR-HENVIGLLDVFTPDETLDDFTDFYLVMPFM--GTDLGKLMKHEKLGEDRIQ 124
Query: 128 TVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIV 187
++ ++ + H+ G++HRDLKP N + +++ LK+ DFG A + V
Sbjct: 125 FLVYQMLKGLRYIHAAGIIHRDLKPGNLAV---NEDCELKILDFGLA--RQADSEMTGYV 179
Query: 188 GSGFYIAPEVLR--RRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFD 245
+ +Y APEV+ RY + +DIWS G I+ +++G F I++
Sbjct: 180 VTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPP 239
Query: 246 TDPW---------------------------PSISSTAKDLVRRMLTKDPKRRITAAQVL 278
+ + S A +L+ +ML D ++R+TA + L
Sbjct: 240 AEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEAL 299
Query: 279 EHPWLRESGEASDDTSVILRMKQF----RRMNKLKKLTIKVIVEYLP 321
HP+ + D+ V F R +++ K++T K ++ + P
Sbjct: 300 AHPYFESLHDTEDEPQVQKYDDSFDDVDRTLDEWKRVTYKEVLSFKP 346
|
| >d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 179 bits (455), Expect = 2e-53
Identities = 47/278 (16%), Positives = 93/278 (33%), Gaps = 21/278 (7%)
Query: 24 HYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQ 83
Y GR +G G FG YL T+ + A K K ++ + E +I + G
Sbjct: 8 RYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVK-----TKHPQLHIESKIYKMMQGG 62
Query: 84 PNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSM 143
+ + + +VMEL S + + +++ + HS
Sbjct: 63 VGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSK 122
Query: 144 GVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVY--------RDIVGSGFYIAP 195
+HRD+KP+NF L+ + DFG A + + + + +++ G+ Y +
Sbjct: 123 NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASI 182
Query: 196 EVLR-RRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDP----WP 250
+ D+ S G +L G P+ + + P
Sbjct: 183 NTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCK 242
Query: 251 SISSTAKDLVRRMLTKDPKRRITAA---QVLEHPWLRE 285
S + + + + Q+ + + R+
Sbjct: 243 GYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQ 280
|
| >d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 176 bits (448), Expect = 2e-52
Identities = 70/293 (23%), Positives = 112/293 (38%), Gaps = 34/293 (11%)
Query: 22 MLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLS 81
M ++ +G G +GV Y T A K I + REI + L
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISL-LKEL 58
Query: 82 GQPNVVEFKSTYEDETAVHVVMELCE-GGDLFDRIIAKGYNSERDAATVLRAIVNAVNVC 140
PN+V+ E +++V E F A + L ++ + C
Sbjct: 59 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 141 HSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLF-EEGQVYRDIVGSGFYIAPEVLR 199
HS V+HRDLKP+N + +K+ DFG A F + Y V + +Y APE+L
Sbjct: 119 HSHRVLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILL 175
Query: 200 --RRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPS------ 251
+ Y +DIWS G I +++ F +++ I + D WP
Sbjct: 176 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD 235
Query: 252 -------------------ISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRE 285
+ + L+ +ML DP +RI+A L HP+ ++
Sbjct: 236 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 288
|
| >d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38 species: Human (Homo sapiens) [TaxId: 9606]
Score = 178 bits (451), Expect = 3e-52
Identities = 72/347 (20%), Positives = 131/347 (37%), Gaps = 46/347 (13%)
Query: 14 LGKAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRRE 73
L K +V Y +G G +G + T A K + +P + RE
Sbjct: 9 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRE 67
Query: 74 IQIRLYLSGQPNVVEFKSTYEDETAVH-----VVMELCEGGDLFDRIIAKGYNSERDAAT 128
+++ ++ NV+ + ++ ++ G D + I+ ++
Sbjct: 68 LRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD-LNNIVKCQKLTDDHVQF 125
Query: 129 VLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVG 188
++ I+ + HS ++HRDLKP N + +++ LK+ DFG A V
Sbjct: 126 LIYQILRGLKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLA--RHTDDEMTGYVA 180
Query: 189 SGFYIAPEVLRRR--YGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDT 246
+ +Y APE++ Y + +DIWS G I+ LL+G F IL+
Sbjct: 181 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 240
Query: 247 DPW---------------------------PSISSTAKDLVRRMLTKDPKRRITAAQVLE 279
+ + A DL+ +ML D +RITAAQ L
Sbjct: 241 ELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA 300
Query: 280 HPWLRESGEASDDTSVILRMKQFRR----MNKLKKLTIKVIVEYLPD 322
H + + + D+ + F +++ K LT ++ ++P
Sbjct: 301 HAYFAQYHDPDDEPVADPYDQSFESRDLLIDEWKSLTYDEVISFVPP 347
|
| >d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fl cytokine receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 176 bits (446), Expect = 9e-52
Identities = 52/288 (18%), Positives = 102/288 (35%), Gaps = 36/288 (12%)
Query: 24 HYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKK---PKMRLAENDMIRREIQIRLYL 80
+ FG++LG G FG T ++ +A K K +E + + E+++ L
Sbjct: 38 NLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQL 97
Query: 81 SGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYN------------------- 121
N+V ++++ E C GDL + + +K
Sbjct: 98 GSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEED 157
Query: 122 ----SERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLF 177
+ D + + +HRDL N + ++K+ DFG A
Sbjct: 158 LNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARN---VLVTHGKVVKICDFGLARDI 214
Query: 178 EEGQ---VYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLS-GVPPFWAETKKG 232
V + ++APE L Y + D+WS G++L+ + S GV P+
Sbjct: 215 MSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDA 274
Query: 233 TYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEH 280
+ ++Q D + + +++ D ++R + +
Sbjct: 275 NFYKLIQNGFKMDQPFY--ATEEIYIIMQSCWAFDSRKRPSFPNLTSF 320
|
| >d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Mouse (Mus musculus) [TaxId: 10090]
Score = 176 bits (447), Expect = 1e-51
Identities = 76/270 (28%), Positives = 129/270 (47%), Gaps = 16/270 (5%)
Query: 22 MLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLS 81
+ + + LG G FG L + YA K + K+ ++L + + E +I L
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRI-LQAV 98
Query: 82 GQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCH 141
P +V+ + +++D + +++VME GG++F + G SE A IV H
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 142 SMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLR-R 200
S+ +++RDLKPEN + D ++VTDFG A + G+ +APE++ +
Sbjct: 159 SLDLIYRDLKPEN---LLIDQQGYIQVTDFGFAK--RVKGRTWTLCGTPEALAPEIILSK 213
Query: 201 RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLV 260
Y K +D W+ GV++Y + +G PPF+A+ Y+ I+ G++ F SS KDL+
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF----PSHFSSDLKDLL 269
Query: 261 RRMLTKDPKRRI-----TAAQVLEHPWLRE 285
R +L D +R + H W
Sbjct: 270 RNLLQVDLTKRFGNLKNGVNDIKNHKWFAT 299
|
| >d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Carboxyl-terminal src kinase (csk) species: Human (Homo sapiens) [TaxId: 9606]
Score = 169 bits (428), Expect = 7e-50
Identities = 52/262 (19%), Positives = 96/262 (36%), Gaps = 21/262 (8%)
Query: 24 HYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQ 83
+ +G+G+FG L A K I A E + L
Sbjct: 8 ELKLLQTIGKGEFGDVMLGDY--RGNKVAVKCIKND-----ATAQAFLAEASVMTQLR-H 59
Query: 84 PNVVEFK-STYEDETAVHVVMELCEGGDLFDRIIAKGYN--SERDAATVLRAIVNAVNVC 140
N+V+ E++ +++V E G L D + ++G + + A+
Sbjct: 60 SNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYL 119
Query: 141 HSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLR- 199
+HRDL N + ++ + KV+DFG Q + APE LR
Sbjct: 120 EGNNFVHRDLAARN---VLVSEDNVAKVSDFGLTKEASSTQ--DTGKLPVKWTAPEALRE 174
Query: 200 RRYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKD 258
+++ + D+WS G++L+ + S G P+ K + +G + D +
Sbjct: 175 KKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKG---YKMDAPDGCPPAVYE 231
Query: 259 LVRRMLTKDPKRRITAAQVLEH 280
+++ D R + Q+ E
Sbjct: 232 VMKNCWHLDAAMRPSFLQLREQ 253
|
| >d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase SYK species: Human (Homo sapiens) [TaxId: 9606]
Score = 167 bits (424), Expect = 4e-49
Identities = 52/265 (19%), Positives = 95/265 (35%), Gaps = 20/265 (7%)
Query: 29 RMLGRGQFGVSYLCT--ENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNV 86
+ LG G FG + A K + K A D + E + + P +
Sbjct: 13 KELGSGNFGTVKKGYYQMKKVVKTVAVKIL-KNEANDPALKDELLAEANV-MQQLDNPYI 70
Query: 87 VEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVM 146
V E E+ +VME+ E G L + + +++ ++ + + +
Sbjct: 71 VRMIGICEAES-WMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFV 129
Query: 147 HRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRD----IVGSGFYIAPEVLR-RR 201
HRDL N +++ K++DFG + + Y + APE + +
Sbjct: 130 HRDLAARNVLLVTQHY---AKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYK 186
Query: 202 YGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLV 260
+ + D+WS GV+++ S G P+ + +GE DL+
Sbjct: 187 FSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERM---GCPAGCPREMYDLM 243
Query: 261 RRMLTKDPKRRITAAQV---LEHPW 282
T D + R A V L + +
Sbjct: 244 NLCWTYDVENRPGFAAVELRLRNYY 268
|
| >d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: ephb2 receptor tyrosine kinase species: Mouse (Mus musculus) [TaxId: 10090]
Score = 167 bits (424), Expect = 6e-49
Identities = 62/273 (22%), Positives = 103/273 (37%), Gaps = 19/273 (6%)
Query: 19 EDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDM--IRREIQI 76
E + +++G G+FG + +I K K E E I
Sbjct: 22 EIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAI-KTLKSGYTEKQRRDFLSEASI 80
Query: 77 RLYLSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAK-GYNSERDAATVLRAIVN 135
PNV+ + T V ++ E E G L + G + +LR I
Sbjct: 81 MGQFD-HPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAA 139
Query: 136 AVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSG----- 190
+ M +HRDL N I + N + KV+DFG + E+ +
Sbjct: 140 GMKYLADMNYVHRDLAARN---ILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIP 196
Query: 191 -FYIAPEVLR-RRYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQGEIDFDTD 247
+ APE ++ R++ D+WS G++++ ++S G P+W T + +AI Q D+
Sbjct: 197 IRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQ---DYRLP 253
Query: 248 PWPSISSTAKDLVRRMLTKDPKRRITAAQVLEH 280
P S L+ KD R Q++
Sbjct: 254 PPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNT 286
|
| >d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tie2 kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 167 bits (424), Expect = 8e-49
Identities = 55/292 (18%), Positives = 103/292 (35%), Gaps = 25/292 (8%)
Query: 27 FGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNV 86
F ++G G FG K ++ E+++ L PN+
Sbjct: 14 FQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNI 73
Query: 87 VEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYN----------------SERDAATVL 130
+ E +++ +E G+L D + S +
Sbjct: 74 INLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFA 133
Query: 131 RAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIVGSG 190
+ ++ +HRDL N I +N + K+ DFG + E
Sbjct: 134 ADVARGMDYLSQKQFIHRDLAARN---ILVGENYVAKIADFGLSRGQEVYVKKTMGRLPV 190
Query: 191 FYIAPEVLRR-RYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQGEIDFDTDP 248
++A E L Y D+WS GV+L+ ++S G P+ T Y+ + QG + +
Sbjct: 191 RWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQG---YRLEK 247
Query: 249 WPSISSTAKDLVRRMLTKDPKRRITAAQVLEH-PWLRESGEASDDTSVILRM 299
+ DL+R+ + P R + AQ+L + E + +T++ +
Sbjct: 248 PLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEERKTYVNTTLYEKF 299
|
| >d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-jun N-terminal kinase (jnk3s) species: Human (Homo sapiens) [TaxId: 9606]
Score = 168 bits (427), Expect = 1e-48
Identities = 65/323 (20%), Positives = 123/323 (38%), Gaps = 53/323 (16%)
Query: 14 LGKAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRRE 73
+G + V+ Y + +G G G+ + +R A K + +P RE
Sbjct: 8 VGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKL-SRPFQNQTHAKRAYRE 66
Query: 74 IQIRLYLSGQPNVVEF------KSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAA 127
+ + + N++ + T E+ V++VMEL + + +
Sbjct: 67 LVL-MKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI---QMELDHERMS 122
Query: 128 TVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRDIV 187
+L ++ + HS G++HRDLKP N + LK+ DFG A + V
Sbjct: 123 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAGTSFMMTPYV 179
Query: 188 GSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGE----- 241
+ +Y APEV+ Y + +DIWS G I+ ++ F ++ +++
Sbjct: 180 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCP 239
Query: 242 ---------------------------------IDFDTDPWPSISSTAKDLVRRMLTKDP 268
D++ +S A+DL+ +ML DP
Sbjct: 240 EFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDP 299
Query: 269 KRRITAAQVLEHPWLRESGEASD 291
+RI+ L+HP++ + ++
Sbjct: 300 AKRISVDDALQHPYINVWYDPAE 322
|
| >d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Bruton's tyrosine kinase (Btk) species: Human (Homo sapiens) [TaxId: 9606]
Score = 165 bits (418), Expect = 2e-48
Identities = 53/262 (20%), Positives = 97/262 (37%), Gaps = 17/262 (6%)
Query: 24 HYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQ 83
F + LG GQFGV A K I + D E ++ + LS
Sbjct: 5 DLTFLKELGTGQFGVVKYGK-WRGQYDVAIKMIKEGS----MSEDEFIEEAKVMMNLS-H 58
Query: 84 PNVVEFKSTYEDETAVHVVMELCEGGDLFDRII-AKGYNSERDAATVLRAIVNAVNVCHS 142
+V+ + + ++ E G L + + + + + + + A+ S
Sbjct: 59 EKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLES 118
Query: 143 MGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYR--DIVGSGFYIAPEVLR- 199
+HRDL N +D ++KV+DFG + + + + PEVL
Sbjct: 119 KQFLHRDLAARN---CLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMY 175
Query: 200 RRYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKD 258
++ + DIW+ GV+++ + S G P+ T T + I QG + S
Sbjct: 176 SKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYR---PHLASEKVYT 232
Query: 259 LVRRMLTKDPKRRITAAQVLEH 280
++ + R T +L +
Sbjct: 233 IMYSCWHEKADERPTFKILLSN 254
|
| >d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-src tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 165 bits (418), Expect = 4e-48
Identities = 60/271 (22%), Positives = 107/271 (39%), Gaps = 21/271 (7%)
Query: 24 HYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQ 83
LG+G FG ++ T N T R A K++ K + +E Q+ +
Sbjct: 18 SLRLEVKLGQGCFGEVWMGTWNGTTR-VAIKTL----KPGTMSPEAFLQEAQV-MKKLRH 71
Query: 84 PNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKG--YNSERDAATVLRAIVNAVNVCH 141
+V+ + +E +++V E G L D + + Y + I + +
Sbjct: 72 EKLVQLYAVVSEEP-IYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE 130
Query: 142 SMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRD--IVGSGFYIAPEVLR 199
M +HRDL+ N I +N + KV DFG A L E+ + + APE
Sbjct: 131 RMNYVHRDLRAAN---ILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAAL 187
Query: 200 -RRYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAK 257
R+ + D+WS G++L L + G P+ + D + +G + P +
Sbjct: 188 YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG---YRMPCPPECPESLH 244
Query: 258 DLVRRMLTKDPKRRITAAQVLE--HPWLRES 286
DL+ + K+P+ R T + + +
Sbjct: 245 DLMCQCWRKEPEERPTFEYLQAFLEDYFTST 275
|
| >d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase ZAP-70 species: Human (Homo sapiens) [TaxId: 9606]
Score = 164 bits (415), Expect = 1e-47
Identities = 55/264 (20%), Positives = 93/264 (35%), Gaps = 22/264 (8%)
Query: 31 LGRGQFGVSYLCTENSTNR--PYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVE 88
LG G FG + A K + K A+ + + RE QI ++ P +V
Sbjct: 17 LGCGNFGSVRQGVYRMRKKQIDVAIKVL--KQGTEKADTEEMMREAQI-MHQLDNPYIVR 73
Query: 89 FKSTYEDETAVHVVMELCEGGDLFDRIIAKGYN-SERDAATVLRAIVNAVNVCHSMGVMH 147
+ E + +VME+ GG L ++ K + A +L + + +H
Sbjct: 74 LIGVCQAEA-LMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVH 132
Query: 148 RDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRD----IVGSGFYIAPEVLR-RRY 202
RDL N + + K++DFG + Y + APE + R++
Sbjct: 133 RDLAARN---VLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKF 189
Query: 203 GKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVR 261
D+WS GV ++ LS G P+ I QG+ + P L+
Sbjct: 190 SSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGK---RMECPPECPPELYALMS 246
Query: 262 RMLTKDPKRRITAAQV---LEHPW 282
+ R V + +
Sbjct: 247 DCWIYKWEDRPDFLTVEQRMRACY 270
|
| >d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase Itk/Tsk species: Human (Homo sapiens) [TaxId: 9606]
Score = 162 bits (411), Expect = 2e-47
Identities = 57/270 (21%), Positives = 105/270 (38%), Gaps = 18/270 (6%)
Query: 24 HYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQ 83
F + +G GQFG+ +L A K+I + + E ++ + LS
Sbjct: 6 ELTFVQEIGSGQFGLVHLGY-WLNKDKVAIKTIREGAMSE----EDFIEEAEVMMKLS-H 59
Query: 84 PNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGY-NSERDAATVLRAIVNAVNVCHS 142
P +V+ ++ + +V E E G L D + + + + + +
Sbjct: 60 PKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEE 119
Query: 143 MGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRD--IVGSGFYIAPEVLR- 199
V+HRDL N +N ++KV+DFG + Q + +PEV
Sbjct: 120 ACVIHRDLAARN---CLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSF 176
Query: 200 RRYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKD 258
RY + D+WS GV+++ + S G P+ + + I G F S+
Sbjct: 177 SRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTG---FRLYKPRLASTHVYQ 233
Query: 259 LVRRMLTKDPKRRITAAQVLEH-PWLRESG 287
++ + P+ R +++L + ESG
Sbjct: 234 IMNHCWKERPEDRPAFSRLLRQLAEIAESG 263
|
| >d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Abelsone tyrosine kinase (abl) species: Mouse (Mus musculus) [TaxId: 10090]
Score = 162 bits (412), Expect = 3e-47
Identities = 52/270 (19%), Positives = 98/270 (36%), Gaps = 17/270 (6%)
Query: 24 HYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQ 83
LG GQ+G Y + A K++ + E + +E + +
Sbjct: 18 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIK-H 72
Query: 84 PNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYN--SERDAATVLRAIVNAVNVCH 141
PN+V+ E +++ E G+L D + S + I +A+
Sbjct: 73 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE 132
Query: 142 SMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRD--IVGSGFYIAPEVLR 199
+HRDL N +N L+KV DFG + L + APE L
Sbjct: 133 KKNFIHRDLAARN---CLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLA 189
Query: 200 R-RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKD 258
++ + D+W+ GV+L+ + + + +L+ D+ + +
Sbjct: 190 YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK--DYRMERPEGCPEKVYE 247
Query: 259 LVRRMLTKDPKRRITAAQVLE--HPWLRES 286
L+R +P R + A++ + +ES
Sbjct: 248 LMRACWQWNPSDRPSFAEIHQAFETMFQES 277
|
| >d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Focal adhesion kinase 1 (fak) species: Human (Homo sapiens) [TaxId: 9606]
Score = 160 bits (405), Expect = 2e-46
Identities = 59/263 (22%), Positives = 98/263 (37%), Gaps = 14/263 (5%)
Query: 24 HYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAE-NDMIRREIQIRLYLSG 82
GR +G GQFG + S P +I + +E +
Sbjct: 8 RIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALT-MRQFD 66
Query: 83 QPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYN-SERDAATVLRAIVNAVNVCH 141
P++V+ + V ++MELC G+L + + Y+ + A+
Sbjct: 67 HPHIVKLIGVITENP-VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE 125
Query: 142 SMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYR--DIVGSGFYIAPEVLR 199
S +HRD+ N + N +K+ DFG + E+ Y+ ++APE +
Sbjct: 126 SKRFVHRDIAARN---VLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESIN 182
Query: 200 -RRYGKEIDIWSAGVILY-ILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAK 257
RR+ D+W GV ++ IL+ GV PF I GE P+ T
Sbjct: 183 FRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE---RLPMPPNCPPTLY 239
Query: 258 DLVRRMLTKDPKRRITAAQVLEH 280
L+ + DP RR ++
Sbjct: 240 SLMTKCWAYDPSRRPRFTELKAQ 262
|
| >d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-KIT receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 159 bits (403), Expect = 9e-46
Identities = 59/282 (20%), Positives = 101/282 (35%), Gaps = 31/282 (10%)
Query: 24 HYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKK---PKMRLAENDMIRREIQIRLYL 80
FG+ LG G FG T + A ++A K P L E + + E+++ YL
Sbjct: 24 RLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYL 83
Query: 81 SGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYN------------------S 122
N+V V+ E C GDL + + K +
Sbjct: 84 GNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALD 143
Query: 123 ERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQV 182
D + + + S +HRDL N I + K+ DFG A +
Sbjct: 144 LEDLLSFSYQVAKGMAFLASKNCIHRDLAARN---ILLTHGRITKICDFGLARDIKNDSN 200
Query: 183 YR---DIVGSGFYIAPEVLRRRY-GKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAI 237
Y + ++APE + E D+WS G+ L+ L S G P+ + +
Sbjct: 201 YVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKM 260
Query: 238 LQGEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLE 279
++ + + D+++ DP +R T Q+++
Sbjct: 261 IKEGFRMLSPEH--APAEMYDIMKTCWDADPLKRPTFKQIVQ 300
|
| >d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Activated CDC42 kinase 1, ACK1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 158 bits (400), Expect = 1e-45
Identities = 50/273 (18%), Positives = 88/273 (32%), Gaps = 19/273 (6%)
Query: 24 HYFFGRMLGRGQFGVSYLCTENSTN---RPYACKSIAKKPKMRLAENDMIRREIQIRLYL 80
LG G FGV ++ + A K + + D RE+ L
Sbjct: 9 DLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSL 68
Query: 81 SGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAK-GYNSERDAATVLRAIVNAVNV 139
N++ + +V EL G L DR+ G+ + + +
Sbjct: 69 D-HRNLIRLYGVVLTPP-MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGY 126
Query: 140 CHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVY----RDIVGSGFYIAP 195
S +HRDL N + L+K+ DFG + + + AP
Sbjct: 127 LESKRFIHRDLAARN---LLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAP 183
Query: 196 EVLRRR-YGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQGEIDFDTDPWPSIS 253
E L+ R + D W GV L+ + + G P+ I +
Sbjct: 184 ESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERL--PRPEDCP 241
Query: 254 STAKDLVRRMLTKDPKRRITAAQVLEHPWLRES 286
+++ + P+ R T + + +L E+
Sbjct: 242 QDIYNVMVQCWAHKPEDRPTFVALRD--FLLEA 272
|
| >d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Lymphocyte kinase (lck) species: Human (Homo sapiens) [TaxId: 9606]
Score = 156 bits (396), Expect = 4e-45
Identities = 52/262 (19%), Positives = 92/262 (35%), Gaps = 19/262 (7%)
Query: 24 HYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQ 83
LG GQFG ++ N + A KS+ + D E + L
Sbjct: 14 TLKLVERLGAGQFGEVWMGYYN-GHTKVAVKSLKQGSMSP----DAFLAEANLMKQLQ-H 67
Query: 84 PNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYN--SERDAATVLRAIVNAVNVCH 141
+V + E ++++ E E G L D + + + I +
Sbjct: 68 QRLVRLYAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE 126
Query: 142 SMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRD--IVGSGFYIAPEVLR 199
+HRDL+ N I D K+ DFG A L E+ + + APE +
Sbjct: 127 ERNYIHRDLRAAN---ILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAIN 183
Query: 200 -RRYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAK 257
+ + D+WS G++L +++ G P+ T + +G + +
Sbjct: 184 YGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERG---YRMVRPDNCPEELY 240
Query: 258 DLVRRMLTKDPKRRITAAQVLE 279
L+R + P+ R T +
Sbjct: 241 QLMRLCWKERPEDRPTFDYLRS 262
|
| >d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fibroblast growth factor receptor 1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 156 bits (394), Expect = 2e-44
Identities = 48/280 (17%), Positives = 100/280 (35%), Gaps = 26/280 (9%)
Query: 24 HYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIA---KKPKMRLAENDM--IRREIQIRL 78
G+ LG G FG L ++ + K K E D+ + E+++
Sbjct: 14 RLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMK 73
Query: 79 YLSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYN----------------S 122
+ N++ + ++V++E G+L + + A+ S
Sbjct: 74 MIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLS 133
Query: 123 ERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQV 182
+D + + + S +HRDL N + + + +
Sbjct: 134 SKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK 193
Query: 183 YRDIVGSGFYIAPEVLR-RRYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQG 240
+ ++APE L R Y + D+WS GV+L+ + + G P+ + + + +G
Sbjct: 194 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEG 253
Query: 241 EIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEH 280
D + ++ ++R P +R T Q++E
Sbjct: 254 HR---MDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVED 290
|
| >d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Score = 154 bits (391), Expect = 3e-44
Identities = 43/286 (15%), Positives = 92/286 (32%), Gaps = 22/286 (7%)
Query: 24 HYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQ 83
HY GR +G G FGV + T N+ A K ++ ++ +R E + L+G
Sbjct: 6 HYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRR-----SDAPQLRDEYRTYKLLAGC 60
Query: 84 PNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSM 143
+ ++ +V++L + S + A + ++ V H
Sbjct: 61 TGIPNVYYFGQEGLHNVLVIDLLGPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEK 120
Query: 144 GVMHRDLKPEN--FSFISRDDNALLKVTDFGSALLFEEG--------QVYRDIVGSGFYI 193
+++RD+KP+N + + ++ V DFG + + + +++ G+ Y+
Sbjct: 121 SLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYM 180
Query: 194 APEVLR-RRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDP---- 248
+ R + D+ + G + L G P+ + + P
Sbjct: 181 SINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPLREL 240
Query: 249 WPSISSTAKDLVRRMLTKDPKRRITAAQVLE--HPWLRESGEASDD 292
+ + L D+
Sbjct: 241 CAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLERLNTTEDE 286
|
| >d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: EGF receptor tyrosine kinase, Erbb-1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 152 bits (385), Expect = 5e-43
Identities = 47/263 (17%), Positives = 83/263 (31%), Gaps = 14/263 (5%)
Query: 25 YFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAK--KPKMRLAENDMIRREIQIRLYLSG 82
+ ++LG G FG Y K + N I E + +
Sbjct: 11 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV-MASVD 69
Query: 83 QPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHS 142
P+V T + + G L K + I +N
Sbjct: 70 NPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 129
Query: 143 MGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRD---IVGSGFYIAPEVLR 199
++HRDL N + +K+TDFG A L + ++A E +
Sbjct: 130 RRLVHRDLAARN---VLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 186
Query: 200 -RRYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAK 257
R Y + D+WS GV ++ L++ G P+ + +GE P +
Sbjct: 187 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERL---PQPPICTIDVY 243
Query: 258 DLVRRMLTKDPKRRITAAQVLEH 280
++ + D R +++
Sbjct: 244 MIMVKCWMIDADSRPKFRELIIE 266
|
| >d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Musk tyrosine kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 151 bits (383), Expect = 5e-43
Identities = 50/290 (17%), Positives = 99/290 (34%), Gaps = 43/290 (14%)
Query: 24 HYFFGRMLGRGQFGVSYLCT-----ENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRL 78
+ + R +G G FG + A K + K + +RE + +
Sbjct: 14 NIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKML--KEEASADMQADFQREAAL-M 70
Query: 79 YLSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYN----------------- 121
PN+V+ + ++ E GDL + + + +
Sbjct: 71 AEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVS 130
Query: 122 -------SERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSA 174
S + + R + + +HRDL N +N ++K+ DFG +
Sbjct: 131 SPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRN---CLVGENMVVKIADFGLS 187
Query: 175 LLFEEGQVYR---DIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLS-GVPPFWAET 229
Y+ + ++ PE + RY E D+W+ GV+L+ + S G+ P++
Sbjct: 188 RNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMA 247
Query: 230 KKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLE 279
+ + G I + +L+R +K P R + +
Sbjct: 248 HEEVIYYVRDGNIL---ACPENCPLELYNLMRLCWSKLPADRPSFCSIHR 294
|
| >d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: epha2 receptor tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 149 bits (376), Expect = 4e-42
Identities = 56/267 (20%), Positives = 104/267 (38%), Gaps = 20/267 (7%)
Query: 24 HYFFGRMLGRGQFGVSYLCTENSTN----RPYACKSIAKKPKMRLAENDMIRREIQIRLY 79
+++G G+FG Y +++ P A K++ K + E I +
Sbjct: 8 CVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTL--KAGYTEKQRVDFLGEAGI-MG 64
Query: 80 LSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAK-GYNSERDAATVLRAIVNAVN 138
N++ + + ++ E E G L + K G S +LR I +
Sbjct: 65 QFSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMK 124
Query: 139 VCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYR----DIVGSGFYIA 194
+M +HRDL N I + N + KV+DFG + + E+ + A
Sbjct: 125 YLANMNYVHRDLAARN---ILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTA 181
Query: 195 PEVLR-RRYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQGEIDFDTDPWPSI 252
PE + R++ D+WS G++++ +++ G P+W + AI G F
Sbjct: 182 PEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDG---FRLPTPMDC 238
Query: 253 SSTAKDLVRRMLTKDPKRRITAAQVLE 279
S L+ + ++ RR A ++
Sbjct: 239 PSAIYQLMMQCWQQERARRPKFADIVS 265
|
| >d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Insulin-like growth factor 1 receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 149 bits (376), Expect = 6e-42
Identities = 56/288 (19%), Positives = 105/288 (36%), Gaps = 35/288 (12%)
Query: 24 HYFFGRMLGRGQFGVSYLCT-----ENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRL 78
R LG+G FG+ Y ++ A K++ + MR E E + +
Sbjct: 21 KITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMR--ERIEFLNEASV-M 77
Query: 79 YLSGQPNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAKGYN----------SERDAAT 128
+VV V+MEL GDL + + S
Sbjct: 78 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQ 137
Query: 129 VLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYR---D 185
+ I + + ++ +HRDL N ++ +K+ DFG E YR
Sbjct: 138 MAGEIADGMAYLNANKFVHRDLAARNCMV---AEDFTVKIGDFGMTRDIYETDYYRKGGK 194
Query: 186 IVGSGFYIAPEVLR-RRYGKEIDIWSAGVILYILLSGV-PPFWAETKKGTYDAILQGEID 243
+ +++PE L+ + D+WS GV+L+ + + P+ + + +++G +
Sbjct: 195 GLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGL- 253
Query: 244 FDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLE------HPWLRE 285
D + +L+R +PK R + +++ P RE
Sbjct: 254 --LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFRE 299
|
| >d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Hepatocyte growth factor receptor, c-MET species: Human (Homo sapiens) [TaxId: 9606]
Score = 147 bits (372), Expect = 3e-41
Identities = 61/287 (21%), Positives = 112/287 (39%), Gaps = 26/287 (9%)
Query: 11 DPILGKAYEDVM-----LHYFFGRMLGRGQFGVSYLCT---ENSTNRPYACKSIAKKPKM 62
+P L +A + V+ L F ++GRG FG Y T + A KS+
Sbjct: 10 NPELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSL--NRIT 67
Query: 63 RLAENDMIRREIQIRLYLSGQPNVVEFK-STYEDETAVHVVMELCEGGDLFDRIIAKGYN 121
+ E E I + PNV+ E + VV+ + GDL + I + +N
Sbjct: 68 DIGEVSQFLTEGII-MKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN 126
Query: 122 -SERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEG 180
+ +D + + S +HRDL N D+ +KV DFG A +
Sbjct: 127 PTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARN---CMLDEKFTVKVADFGLARDMYDK 183
Query: 181 QVYRD-----IVGSGFYIAPEVLR-RRYGKEIDIWSAGVILYILLS-GVPPFWAETKKGT 233
+ ++A E L+ +++ + D+WS GV+L+ L++ G PP+
Sbjct: 184 EFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDI 243
Query: 234 YDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEH 280
+LQG + +++ + + R + ++++
Sbjct: 244 TVYLLQGRRLLQPE---YCPDPLYEVMLKCWHPKAEMRPSFSELVSR 287
|
| >d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Vascular endothelial growth factor receptor 2 (kdr) species: Human (Homo sapiens) [TaxId: 9606]
Score = 144 bits (364), Expect = 3e-40
Identities = 55/282 (19%), Positives = 108/282 (38%), Gaps = 30/282 (10%)
Query: 24 HYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKK---PKMRLAENDMIRREIQIRLYL 80
G+ LGRG FG ++ C+++A K +E+ + E++I +++
Sbjct: 14 RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHI 73
Query: 81 SGQPNVVEFK-STYEDETAVHVVMELCEGGDLFDRI----------------IAKGYNSE 123
NVV + + + V++E C+ G+L + + K + +
Sbjct: 74 GHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTL 133
Query: 124 RDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVY 183
+ + S +HRDL N I + ++K+ DFG A + Y
Sbjct: 134 EHLICYSFQVAKGMEFLASRKCIHRDLAARN---ILLSEKNVVKICDFGLARDIYKDPDY 190
Query: 184 ---RDIVGSGFYIAPEVLR-RRYGKEIDIWSAGVILYILLSGV-PPFWAETKKGTYDAIL 238
D ++APE + R Y + D+WS GV+L+ + S P+ + L
Sbjct: 191 VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL 250
Query: 239 QGEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEH 280
+ + + + +P +R T ++++EH
Sbjct: 251 KEGTRMRAPDY--TTPEMYQTMLDCWHGEPSQRPTFSELVEH 290
|
| >d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Sky1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 139 bits (351), Expect = 9e-38
Identities = 54/324 (16%), Positives = 103/324 (31%), Gaps = 66/324 (20%)
Query: 25 YFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQI-------- 76
Y R LG G F +L + N A K + + EI++
Sbjct: 15 YILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYT----EAAEDEIKLLQRVNDAD 70
Query: 77 --RLYLSGQPNVVEFKSTYED--ETAVHVVMELCEGG---DLFDRIIAKGYNSERDAATV 129
+ G ++++ + VHVVM G + +
Sbjct: 71 NTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQI 130
Query: 130 LRAIVNAVN-VCHSMGVMHRDLKPENFSFISRDDNA-LLKVTDFGSALLFEEGQVYRDIV 187
+ ++ ++ + G++H D+KPEN D L+++ + Y + +
Sbjct: 131 SKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHYTNSI 190
Query: 188 GSGFYIAPEVLR-RRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAI--------- 237
+ Y +PEVL +G DIWS +++ L++G F +
Sbjct: 191 QTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIEL 250
Query: 238 -----------------------------------LQGEIDFDTDPWPSISSTAKDLVRR 262
L+ + + D +
Sbjct: 251 LGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSP 310
Query: 263 MLTKDPKRRITAAQVLEHPWLRES 286
ML DP++R A ++ HPWL+++
Sbjct: 311 MLQLDPRKRADAGGLVNHPWLKDT 334
|
| >d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Type I TGF-beta receptor R4 species: Human (Homo sapiens) [TaxId: 9606]
Score = 135 bits (341), Expect = 7e-37
Identities = 52/297 (17%), Positives = 96/297 (32%), Gaps = 53/297 (17%)
Query: 25 YFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQP 84
+G+G+FG + A K + + + I + + +R
Sbjct: 5 IVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSREERSWFREAEIYQTVMLR-----HE 57
Query: 85 NVVEFKSTYEDE----TAVHVVMELCEGGDLFDRIIAKGYNSER-------DAATVLRAI 133
N++ F + + T + +V + E G LFD + E A+ +
Sbjct: 58 NILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLH 117
Query: 134 VNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVYRD-----IVG 188
+ V + HRDLK +N I N + D G A+ + D VG
Sbjct: 118 MEIVGTQGKPAIAHRDLKSKN---ILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVG 174
Query: 189 SGFYIAPEVLRR-------RYGKEIDIWSAGVILYILLSGVPPF---------------- 225
+ Y+APEVL K DI++ G++ + +
Sbjct: 175 TKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPS 234
Query: 226 ---WAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLE 279
E +K + L+ I ++R + R+TA ++ +
Sbjct: 235 DPSVEEMRKVVCEQKLRPNIPNRWQS-CEALRVMAKIMRECWYANGAARLTALRIKK 290
|
| >d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} Length = 191 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: RIO1-like kinases domain: Rio2 serine protein kinase C-terminal domain species: Archaeoglobus fulgidus [TaxId: 2234]
Score = 77.5 bits (190), Expect = 3e-17
Identities = 39/206 (18%), Positives = 69/206 (33%), Gaps = 35/206 (16%)
Query: 28 GRMLGRGQFGVSYLCTENSTNRPYACKSI------AKKPKMRLAENDMIRREIQIRLYLS 81
G+++G G+ + C + K KK K + D+ + IR +
Sbjct: 5 GKLMGEGKESAVFNCY-SEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARN 63
Query: 82 GQPNVVEFKSTYE----DETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAV 137
+ + + V+MEL + +L+ + VL I+ V
Sbjct: 64 EFRALQKLQGLAVPKVYAWEGNAVLMELIDAKELY-------RVRVENPDEVLDMILEEV 116
Query: 138 NVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQ----VYRDIVG-SGFY 192
+ G++H DL N + + DF ++ E + RD+ ++
Sbjct: 117 AKFYHRGIVHGDLSQYNVLV----SEEGIWIIDFPQSVEVGEEGWREILERDVRNIITYF 172
Query: 193 IAPEVLRRRYGKEIDIWSAGVILYIL 218
R Y E DI S I IL
Sbjct: 173 ------SRTYRTEKDINS--AIDRIL 190
|
| >d1topa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} Length = 162 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus) [TaxId: 9031]
Score = 71.5 bits (174), Expect = 2e-15
Identities = 33/150 (22%), Positives = 62/150 (41%), Gaps = 12/150 (8%)
Query: 318 EYLPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNSST- 376
+L +E K F D D G +S EL + +G T+ ++ ++E V +
Sbjct: 12 AFLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSG 71
Query: 377 -----------LESLCENLPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEE 425
+ + E+ K +++L FR D + + + EL L G + E
Sbjct: 72 TIDFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVTE 131
Query: 426 SEVNQYMEAGDIDGNGNIDSIEFVNLMTDI 455
++ M+ D + +G ID EF+ +M +
Sbjct: 132 EDIEDLMKDSDKNNDGRIDFDEFLKMMEGV 161
|
| >d1topa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} Length = 162 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus) [TaxId: 9031]
Score = 44.5 bits (104), Expect = 4e-06
Identities = 27/97 (27%), Positives = 44/97 (45%), Gaps = 4/97 (4%)
Query: 384 LPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNI 443
L + + F D D ++ EL + LG + E++ +E D DG+G I
Sbjct: 14 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTI 73
Query: 444 DSIEFVNL----MTDIYKLETPELLEKAFQYLDKNSD 476
D EF+ + M + K ++ E L F+ DKN+D
Sbjct: 74 DFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNAD 110
|
| >d1lkja_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 146 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 70.6 bits (172), Expect = 3e-15
Identities = 36/143 (25%), Positives = 64/143 (44%), Gaps = 10/143 (6%)
Query: 320 LPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNSSTLES 379
L +E+ KE F D D NG++S EL + +G +E +V LM + +
Sbjct: 4 LTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQI 63
Query: 380 LCENLP---------TKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQ 430
+Q+L+E F+ D + ++ +ELK L +G L ++EV+
Sbjct: 64 EFSEFLALMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDD 123
Query: 431 YMEAGDIDGNGNIDSIEFVNLMT 453
+ DG+G I+ +F L++
Sbjct: 124 MLREVS-DGSGEINIQQFAALLS 145
|
| >d1lkja_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 146 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 47.5 bits (112), Expect = 3e-07
Identities = 33/96 (34%), Positives = 53/96 (55%), Gaps = 1/96 (1%)
Query: 382 ENLPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNG 441
NL ++ + E F D DN+ +++ SEL + LG + E+EVN M D+DGN
Sbjct: 2 SNLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNH 61
Query: 442 NIDSIEFVNLMTD-IYKLETPELLEKAFQYLDKNSD 476
I+ EF+ LM+ + ++ + L +AF+ DKN D
Sbjct: 62 QIEFSEFLALMSRQLKSNDSEQELLEAFKVFDKNGD 97
|
| >d1dtla_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} Length = 156 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus) [TaxId: 9031]
Score = 70.8 bits (172), Expect = 3e-15
Identities = 35/155 (22%), Positives = 66/155 (42%), Gaps = 13/155 (8%)
Query: 314 KVIVEYLPDEETQALKEKFIEMDTD-KNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVK 372
K VE L +E+ K F ++G++S EL + +G T +++ +++ V
Sbjct: 2 KAAVEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVD 61
Query: 373 NSSTLESLCENLPT------------KEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLG 420
+ + K +++L + FR D + + L ELK L G
Sbjct: 62 EDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMFDKNADGYIDLEELKIMLQATG 121
Query: 421 SALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDI 455
+ E ++ + M+ GD + +G ID EF+ M +
Sbjct: 122 ETITEDDIEELMKDGDKNNDGRIDYDEFLEFMKGV 156
|
| >d1exra_ a.39.1.5 (A:) Calmodulin {Ciliate (Paramecium tetraurelia) [TaxId: 5888]} Length = 146 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Ciliate (Paramecium tetraurelia) [TaxId: 5888]
Score = 68.8 bits (167), Expect = 1e-14
Identities = 38/145 (26%), Positives = 70/145 (48%), Gaps = 9/145 (6%)
Query: 318 EYLPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVK----- 372
E L +E+ KE F D D +GT++ EL + +G TE +++ ++ V
Sbjct: 1 EQLTEEQIAEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 60
Query: 373 ----NSSTLESLCENLPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEV 428
+ +++L+E F+ D D + ++ +EL+ + LG L + EV
Sbjct: 61 TIDFPEFLSLMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEV 120
Query: 429 NQYMEAGDIDGNGNIDSIEFVNLMT 453
++ + DIDG+G+I+ EFV +M
Sbjct: 121 DEMIREADIDGDGHINYEEFVRMMV 145
|
| >d1exra_ a.39.1.5 (A:) Calmodulin {Ciliate (Paramecium tetraurelia) [TaxId: 5888]} Length = 146 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Ciliate (Paramecium tetraurelia) [TaxId: 5888]
Score = 48.7 bits (115), Expect = 1e-07
Identities = 30/96 (31%), Positives = 49/96 (51%), Gaps = 1/96 (1%)
Query: 382 ENLPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNG 441
E L ++ + E F D D T+T EL + LG E+E+ + D DGNG
Sbjct: 1 EQLTEEQIAEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 60
Query: 442 NIDSIEFVNLMT-DIYKLETPELLEKAFQYLDKNSD 476
ID EF++LM + + ++ E L +AF+ D++ +
Sbjct: 61 TIDFPEFLSLMARKMKEQDSEEELIEAFKVFDRDGN 96
|
| >d2obha1 a.39.1.5 (A:26-166) Calmodulin {Human (Homo sapiens) [TaxId: 9606]} Length = 141 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Human (Homo sapiens) [TaxId: 9606]
Score = 68.4 bits (166), Expect = 2e-14
Identities = 34/140 (24%), Positives = 65/140 (46%), Gaps = 9/140 (6%)
Query: 322 DEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNSSTLESLC 381
+E+ Q ++E F D D GT+ EL+ + +G + ++K ++ + T +
Sbjct: 2 EEQKQEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNF 61
Query: 382 ENLPTKEKQKLMEK---------FREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYM 432
+ T QK+ EK F+ D D + ++ LK +LG L + E+ + +
Sbjct: 62 GDFLTVMTQKMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMI 121
Query: 433 EAGDIDGNGNIDSIEFVNLM 452
+ D DG+G + EF+ +M
Sbjct: 122 DEADRDGDGEVSEQEFLRIM 141
|
| >d2obha1 a.39.1.5 (A:26-166) Calmodulin {Human (Homo sapiens) [TaxId: 9606]} Length = 141 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Human (Homo sapiens) [TaxId: 9606]
Score = 49.2 bits (116), Expect = 7e-08
Identities = 25/91 (27%), Positives = 49/91 (53%), Gaps = 1/91 (1%)
Query: 387 KEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSI 446
++KQ++ E F D D + T+ + ELK + LG ++ E+ + + D +G G ++
Sbjct: 3 EQKQEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNFG 62
Query: 447 EFVNLMTDI-YKLETPELLEKAFQYLDKNSD 476
+F+ +MT + +T E + KAF+ D +
Sbjct: 63 DFLTVMTQKMSEKDTKEEILKAFKLFDDDET 93
|
| >d1juoa_ a.39.1.8 (A:) Sorcin {Human (Homo sapiens) [TaxId: 9606]} Length = 172 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Sorcin species: Human (Homo sapiens) [TaxId: 9606]
Score = 67.5 bits (164), Expect = 7e-14
Identities = 30/164 (18%), Positives = 54/164 (32%), Gaps = 16/164 (9%)
Query: 320 LPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVG-----SMLTEFDVKHLMEAV--K 372
P + L F + ++G + DEL+ LT+ G + ++ +
Sbjct: 1 FPGQTQDPLYGYFAAVA-GQDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRD 59
Query: 373 NSSTLESLCENLPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYM 432
S T+ + F DTD S T+ EL+ L +G L VN
Sbjct: 60 MSGTMGFNEFKELWAVLNGWRQHFISFDTDRSGTVDPQELQKALTTMGFRLSPQAVNSIA 119
Query: 433 EAGDIDGNGNIDSIEFVNLMTDIYKLETPELLEKAFQYLDKNSD 476
+ +G D +++ + L +F+ D
Sbjct: 120 KRYSTNGKITFD--DYIACCVKL------RALTDSFRRRDTAQQ 155
|
| >d1juoa_ a.39.1.8 (A:) Sorcin {Human (Homo sapiens) [TaxId: 9606]} Length = 172 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Sorcin species: Human (Homo sapiens) [TaxId: 9606]
Score = 39.3 bits (91), Expect = 3e-04
Identities = 21/86 (24%), Positives = 36/86 (41%), Gaps = 10/86 (11%)
Query: 330 EKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNSSTLE-----SLCENL 384
+ FI DTD++GT+ EL+ LT +G L+ V + + + + + C L
Sbjct: 81 QHFISFDTDRSGTVDPQELQKALTTMGFRLSPQAVNSIAKRYSTNGKITFDDYIACCVKL 140
Query: 385 PTKEKQKLMEKFREMDTDNSDTLTLS 410
+ L + FR DT +
Sbjct: 141 -----RALTDSFRRRDTAQQGVVNFP 161
|
| >d1w7jb1 a.39.1.5 (B:11-149) Myosin Essential Chain {Human (Homo sapiens) [TaxId: 9606]} Length = 139 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Myosin Essential Chain species: Human (Homo sapiens) [TaxId: 9606]
Score = 62.7 bits (151), Expect = 1e-12
Identities = 29/138 (21%), Positives = 54/138 (39%), Gaps = 14/138 (10%)
Query: 328 LKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNS------------- 374
KE F D +G + Y + + +G T +V ++ K+
Sbjct: 2 FKEAFELFDRVGDGKILYSQCGDVMRALGQNPTNAEVLKVLGNPKSDELKSRRVDFETFL 61
Query: 375 STLESLCENLPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEA 434
L+++ +N + +E FR D + + + +EL+ L LG + E EV +
Sbjct: 62 PMLQAVAKNRGQGTYEDYLEGFRVFDKEGNGKVMGAELRHVLTTLGEKMTEEEVETVLAG 121
Query: 435 GDIDGNGNIDSIEFVNLM 452
D NG I+ F+ +
Sbjct: 122 -HEDSNGCINYEAFLKHI 138
|
| >d1uhka1 a.39.1.5 (A:3-189) Calcium-regulated photoprotein {Jellyfish (Aequorea aequorea), aequorin [TaxId: 168712]} Length = 187 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium-regulated photoprotein species: Jellyfish (Aequorea aequorea), aequorin [TaxId: 168712]
Score = 63.1 bits (152), Expect = 3e-12
Identities = 30/174 (17%), Positives = 52/174 (29%), Gaps = 29/174 (16%)
Query: 318 EYLPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVG--------------------- 356
++ K F +D + NG +S DE+ + +
Sbjct: 4 DFDNPRWIGRHKHMFNFLDVNHNGKISLDEMVYKASDIVINNLGATPEQAKRHKDAVEAF 63
Query: 357 --------SMLTEFDVKHLMEAVKNSSTLESLCENLPTKEKQKLMEKFREMDTDNSDTLT 408
+ T++ + LE +N PT + F +D D + +T
Sbjct: 64 FGGAGMKYGVETDWPAYIEGWKKLATDELEKYAKNEPTLIRIWGDALFDIVDKDQNGAIT 123
Query: 409 LSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIYKLETPE 462
L E KA G + + DID +G +D E + P
Sbjct: 124 LDEWKAYTKAAGIIQSSEDCEETFRVCDIDESGQLDVDEMTRQHLGFWYTMDPA 177
|
| >d1y1xa_ a.39.1.8 (A:) Programmed cell death 6 protein-like protein {Leishmania major [TaxId: 5664]} Length = 182 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Programmed cell death 6 protein-like protein species: Leishmania major [TaxId: 5664]
Score = 62.8 bits (151), Expect = 3e-12
Identities = 33/156 (21%), Positives = 58/156 (37%), Gaps = 8/156 (5%)
Query: 323 EETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLT--EFDVKHLMEAVKNSSTLESL 380
+ Q L E F +DTD +G +S EL A L+ G + + M +S +
Sbjct: 15 NDNQELMEWFRAVDTDGSGAISVPELNAALSSAGVPFSLATTEKLLHMYDKNHSGEITFD 74
Query: 381 CENLPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGN 440
+ E FR+ D+ L +E++A L G + E M D
Sbjct: 75 EFKDLHHFILSMREGFRKRDSSGDGRLDSNEVRAALLSSGYQVSEQTFQALMRKFDRQRR 134
Query: 441 GNIDSIEFVNLMTDIYKLETPELLEKAFQYLDKNSD 476
G++ ++V L + + + F + D+
Sbjct: 135 GSLGFDDYVELSIFVCR------VRNVFAFYDRERT 164
|
| >d1alva_ a.39.1.8 (A:) Calpain small (regulatory) subunit (domain VI) {Pig (Sus scrofa) [TaxId: 9823]} Length = 173 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Calpain small (regulatory) subunit (domain VI) species: Pig (Sus scrofa) [TaxId: 9823]
Score = 62.2 bits (150), Expect = 4e-12
Identities = 31/164 (18%), Positives = 58/164 (35%), Gaps = 18/164 (10%)
Query: 323 EETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAV---------KN 373
EE + + F ++ + +S EL L KV + + +
Sbjct: 1 EEVRQFRRLFAQLA-GDDMEVSATELMNILNKVVTRHPDLKTDGFGIDTCRSMVAVMDSD 59
Query: 374 SSTLESLCENLPTKEKQKLM-EKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYM 432
++ E K +++ D D S T+ SEL G L E + +
Sbjct: 60 TTGKLGFEEFKYLWNNIKKWQAIYKQFDVDRSGTIGSSELPGAFEAAGFHLNEHLYSMII 119
Query: 433 EAGDIDGNGNIDSIEFVNLMTDIYKLETPELLEKAFQYLDKNSD 476
D GN+D F++ + + + + +AF+ LDK+
Sbjct: 120 RRYS-DEGGNMDFDNFISCLVRL------DAMFRAFKSLDKDGT 156
|
| >d1alva_ a.39.1.8 (A:) Calpain small (regulatory) subunit (domain VI) {Pig (Sus scrofa) [TaxId: 9823]} Length = 173 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Calpain small (regulatory) subunit (domain VI) species: Pig (Sus scrofa) [TaxId: 9823]
Score = 37.2 bits (85), Expect = 0.002
Identities = 16/137 (11%), Positives = 39/137 (28%), Gaps = 1/137 (0%)
Query: 276 QVLEHPWLRESGEASDDTSVILRMKQFRRMNKLKKLTIKVIVEYLPDEETQALKEKFIEM 335
+L R +D + M+ + + + + +
Sbjct: 27 NILNKVVTRHPDLKTDGFGIDTCRSMVAVMDSDTTGKLGFEEFKYLWNNIKKWQAIYKQF 86
Query: 336 DTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNSSTLESLCENLP-TKEKQKLME 394
D D++GT+ EL G L E ++ + + +
Sbjct: 87 DVDRSGTIGSSELPGAFEAAGFHLNEHLYSMIIRRYSDEGGNMDFDNFISCLVRLDAMFR 146
Query: 395 KFREMDTDNSDTLTLSE 411
F+ +D D + + ++
Sbjct: 147 AFKSLDKDGTGQIQVNI 163
|
| >d1k94a_ a.39.1.8 (A:) Grancalcin {Human (Homo sapiens) [TaxId: 9606]} Length = 165 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Grancalcin species: Human (Homo sapiens) [TaxId: 9606]
Score = 61.9 bits (150), Expect = 5e-12
Identities = 24/153 (15%), Positives = 51/153 (33%), Gaps = 15/153 (9%)
Query: 331 KFIEMDTDKNGTLSYDELRAGLTKVG-----SMLTEFDVKHLMEAV--KNSSTLESLCEN 383
+ ++G + +EL+ LT+ G S + + ++ + ++ +
Sbjct: 4 TYFSAVAGQDGEVDAEELQRCLTQSGINGTYSPFSLETCRIMIAMLDRDHTGKMGFNAFK 63
Query: 384 LPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNI 443
E F +D D S T+ EL+ + +G L + ++ NG I
Sbjct: 64 ELWAALNAWKENFMTVDQDGSGTVEHHELRQAIGLMGYRLSPQTLTTIVK--RYSKNGRI 121
Query: 444 DSIEFVNLMTDIYKLETPELLEKAFQYLDKNSD 476
++V + L F+ D
Sbjct: 122 FFDDYVACCVKL------RALTDFFRKRDHLQQ 148
|
| >d1k94a_ a.39.1.8 (A:) Grancalcin {Human (Homo sapiens) [TaxId: 9606]} Length = 165 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Grancalcin species: Human (Homo sapiens) [TaxId: 9606]
Score = 42.3 bits (99), Expect = 3e-05
Identities = 15/82 (18%), Positives = 33/82 (40%), Gaps = 10/82 (12%)
Query: 334 EMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNSSTLE-----SLCENLPTKE 388
+D D +GT+ + ELR + +G L+ + +++ + + + C L
Sbjct: 78 TVDQDGSGTVEHHELRQAIGLMGYRLSPQTLTTIVKRYSKNGRIFFDDYVACCVKL---- 133
Query: 389 KQKLMEKFREMDTDNSDTLTLS 410
+ L + FR+ D +
Sbjct: 134 -RALTDFFRKRDHLQQGSANFI 154
|
| >d1qv0a_ a.39.1.5 (A:) Calcium-regulated photoprotein {Hydrozoa (Obelia longissima), obelin [TaxId: 32570]} Length = 189 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium-regulated photoprotein species: Hydrozoa (Obelia longissima), obelin [TaxId: 32570]
Score = 62.3 bits (150), Expect = 5e-12
Identities = 32/179 (17%), Positives = 56/179 (31%), Gaps = 29/179 (16%)
Query: 313 IKVIVEYLPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKV----------------- 355
+K+ ++ + K F +D + NG ++ DE+ + +
Sbjct: 1 VKLKTDFDNPRWIKRHKHMFDFLDINGNGKITLDEIVSKASDDICAKLEATPEQTKRHQV 60
Query: 356 ------------GSMLTEFDVKHLMEAVKNSSTLESLCENLPTKEKQKLMEKFREMDTDN 403
F +S L+ N PT ++ F D D
Sbjct: 61 CVEAFFRGCGMEYGKEIAFPQFLDGWKQLATSELKKWARNEPTLIREWGDAVFDIFDKDG 120
Query: 404 SDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIYKLETPE 462
S T+TL E KA G + + + D+D G++D E + PE
Sbjct: 121 SGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDNAGDLDVDEMTRQHLGFWYTLDPE 179
|
| >d1qxpa2 a.39.1.8 (A:515-702) Calpain large subunit, C-terminal domain (domain IV) {Rat (Rattus norvegicus), mu-type [TaxId: 10116]} Length = 188 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Calpain large subunit, C-terminal domain (domain IV) species: Rat (Rattus norvegicus), mu-type [TaxId: 10116]
Score = 61.7 bits (149), Expect = 1e-11
Identities = 30/165 (18%), Positives = 61/165 (36%), Gaps = 18/165 (10%)
Query: 322 DEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEF--------DVKHLMEAV-- 371
+E K F ++ D + +S EL+ L ++ S + + ++ +
Sbjct: 16 EEIDDNFKTLFSKLAGD-DMEISVKELQTILNRIISKHKDLRTNGFSLESCRSMVNLMDR 74
Query: 372 KNSSTLESLCENLPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQY 431
+ L + N+ + + FR+ D D S +++ E++ + G L
Sbjct: 75 DGNGKLGLVEFNILWNRIRNYLTIFRKFDLDKSGSMSAYEMRMAIEAAGFKLPCQLHQVI 134
Query: 432 MEAGDIDGNGNIDSIEFVNLMTDIYKLETPELLEKAFQYLDKNSD 476
+ D ID FV + + E+L K F+ LD +
Sbjct: 135 VAR-FADDELIIDFDNFVRCLVRL------EILFKIFKQLDPENT 172
|
| >d1qxpa2 a.39.1.8 (A:515-702) Calpain large subunit, C-terminal domain (domain IV) {Rat (Rattus norvegicus), mu-type [TaxId: 10116]} Length = 188 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Calpain large subunit, C-terminal domain (domain IV) species: Rat (Rattus norvegicus), mu-type [TaxId: 10116]
Score = 42.4 bits (99), Expect = 4e-05
Identities = 16/84 (19%), Positives = 37/84 (44%), Gaps = 1/84 (1%)
Query: 329 KEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNSSTLESLCENLPTKE 388
F + D DK+G++S E+R + G L + ++ + + +
Sbjct: 96 LTIFRKFDLDKSGSMSAYEMRMAIEAAGFKLPCQLHQVIVARFADDELIIDFDNFVRCLV 155
Query: 389 K-QKLMEKFREMDTDNSDTLTLSE 411
+ + L + F+++D +N+ T+ L
Sbjct: 156 RLEILFKIFKQLDPENTGTIQLDL 179
|
| >d5pala_ a.39.1.4 (A:) Parvalbumin {Leopard shark (Triakis semifasciata) [TaxId: 30493]} Length = 109 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Parvalbumin species: Leopard shark (Triakis semifasciata) [TaxId: 30493]
Score = 58.8 bits (142), Expect = 1e-11
Identities = 28/107 (26%), Positives = 45/107 (42%), Gaps = 9/107 (8%)
Query: 355 VGSMLTEFDVKHLMEAVKNSSTLE-----SLCENLPTKEKQKLMEKFREMDTDNSDTLTL 409
+ +L D+ + A K+ T + L L K ++ E F +D D S +
Sbjct: 2 MTKVLKADDINKAISAFKDPGTFDYKRFFHLV-GLKGKTDAQVKEVFEILDKDQSGFIEE 60
Query: 410 SELKAGLAKL---GSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMT 453
ELK L G L ++E + AGD D +G I + EF ++
Sbjct: 61 EELKGVLKGFSAHGRDLNDTETKALLAAGDSDHDGKIGADEFAKMVA 107
|
| >d1rroa_ a.39.1.4 (A:) Oncomodulin {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 108 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Oncomodulin species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 58.8 bits (142), Expect = 1e-11
Identities = 29/107 (27%), Positives = 46/107 (42%), Gaps = 9/107 (8%)
Query: 355 VGSMLTEFDVKHLMEAVKNSSTLE-----SLCENLPTKEKQKLMEKFREMDTDNSDTLTL 409
+ +L+ D+ ++ ++ T E L ++ + FR +D D S L
Sbjct: 2 ITDILSAEDIAAALQECQDPDTFEPQKFFQTS-GLSKMSASQVKDIFRFIDNDQSGYLDG 60
Query: 410 SELKAGLAKL---GSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMT 453
ELK L K L ESE M+A D DG+G I + EF ++
Sbjct: 61 DELKYFLQKFQSDARELTESETKSLMDAADNDGDGKIGADEFQEMVH 107
|
| >d1s6ja_ a.39.1.5 (A:) Calcium-dependent protein kinase sk5 CLD {Soybean (Glycine max) [TaxId: 3847]} Length = 87 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium-dependent protein kinase sk5 CLD species: Soybean (Glycine max) [TaxId: 3847]
Score = 57.3 bits (138), Expect = 3e-11
Identities = 34/72 (47%), Positives = 44/72 (61%)
Query: 382 ENLPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNG 441
E L +E L E F+ +DTDNS T+T ELK GL ++GS L ESE+ M+A DID +G
Sbjct: 15 ERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSG 74
Query: 442 NIDSIEFVNLMT 453
ID EF+
Sbjct: 75 TIDYGEFIAATV 86
|
| >d1s6ja_ a.39.1.5 (A:) Calcium-dependent protein kinase sk5 CLD {Soybean (Glycine max) [TaxId: 3847]} Length = 87 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium-dependent protein kinase sk5 CLD species: Soybean (Glycine max) [TaxId: 3847]
Score = 46.5 bits (110), Expect = 2e-07
Identities = 28/58 (48%), Positives = 40/58 (68%)
Query: 314 KVIVEYLPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAV 371
K + E L +EE LKE F +DTD +GT+++DEL+ GL +VGS L E ++K LM+A
Sbjct: 11 KHMAERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAA 68
|
| >d1s6ia_ a.39.1.5 (A:) Calcium-dependent protein kinase sk5 CLD {Soybean (Glycine max) [TaxId: 3847]} Length = 182 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium-dependent protein kinase sk5 CLD species: Soybean (Glycine max) [TaxId: 3847]
Score = 59.7 bits (143), Expect = 4e-11
Identities = 45/143 (31%), Positives = 74/143 (51%), Gaps = 10/143 (6%)
Query: 318 EYLPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNSST- 376
E L +EE LKE F +DTD +GT+++DEL+ GL +VGS L E ++K LM+A +
Sbjct: 2 ERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSG 61
Query: 377 -------LESLCENLPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVN 429
+ + + ++ L+ F D D S +TL E++ G L++ ++
Sbjct: 62 TIDYGEFIAATVHLNKLEREENLVSAFSYFDKDGSGYITLDEIQQACKDFG--LDDIHID 119
Query: 430 QYMEAGDIDGNGNIDSIEFVNLM 452
++ D D +G ID EF +M
Sbjct: 120 DMIKEIDQDNDGQIDYGEFAAMM 142
|
| >d1s6ia_ a.39.1.5 (A:) Calcium-dependent protein kinase sk5 CLD {Soybean (Glycine max) [TaxId: 3847]} Length = 182 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium-dependent protein kinase sk5 CLD species: Soybean (Glycine max) [TaxId: 3847]
Score = 51.2 bits (121), Expect = 3e-08
Identities = 44/93 (47%), Positives = 56/93 (60%)
Query: 382 ENLPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNG 441
E L +E L E F+ +DTDNS T+T ELK GL ++GS L ESE+ M+A DID +G
Sbjct: 2 ERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSG 61
Query: 442 NIDSIEFVNLMTDIYKLETPELLEKAFQYLDKN 474
ID EF+ + KLE E L AF Y DK+
Sbjct: 62 TIDYGEFIAATVHLNKLEREENLVSAFSYFDKD 94
|
| >d1oqpa_ a.39.1.5 (A:) Caltractin (centrin 2) {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]} Length = 77 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Caltractin (centrin 2) species: Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]
Score = 56.0 bits (135), Expect = 6e-11
Identities = 20/66 (30%), Positives = 38/66 (57%)
Query: 388 EKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIE 447
++++++ FR D DNS T+T+ +L+ +LG L E E+ + + D + + ID E
Sbjct: 7 SREEILKAFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEADRNDDNEIDEDE 66
Query: 448 FVNLMT 453
F+ +M
Sbjct: 67 FIRIMK 72
|
| >d1oqpa_ a.39.1.5 (A:) Caltractin (centrin 2) {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]} Length = 77 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Caltractin (centrin 2) species: Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]
Score = 34.8 bits (80), Expect = 0.002
Identities = 15/96 (15%), Positives = 34/96 (35%), Gaps = 28/96 (29%)
Query: 323 EETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNSSTLESLCE 382
+ + + + F D D +GT++ +LR ++G LTE +++ +
Sbjct: 6 DSREEILKAFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEM--------------- 50
Query: 383 NLPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAK 418
E D ++ + + E + K
Sbjct: 51 -------------IAEADRNDDNEIDEDEFIRIMKK 73
|
| >d1pvaa_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]} Length = 109 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Parvalbumin species: Pike (Esox lucius) [TaxId: 8010]
Score = 56.8 bits (137), Expect = 7e-11
Identities = 28/107 (26%), Positives = 46/107 (42%), Gaps = 9/107 (8%)
Query: 355 VGSMLTEFDVKHLMEAVKNSSTLE-----SLCENLPTKEKQKLMEKFREMDTDNSDTLTL 409
+L D+K ++AVK + +L L + + F+ +D D S +
Sbjct: 2 AKDLLKADDIKKALDAVKAEGSFNHKKFFALV-GLKAMSANDVKKVFKAIDADASGFIEE 60
Query: 410 SELKAGLAKL---GSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMT 453
ELK L G L ++E +++A D DG+G I EF L+
Sbjct: 61 EELKFVLKSFAADGRDLTDAETKAFLKAADKDGDGKIGIDEFETLVH 107
|
| >d1df0a1 a.39.1.8 (A:515-700) Calpain large subunit, C-terminal domain (domain IV) {Rat (Rattus norvegicus), M-type [TaxId: 10116]} Length = 186 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Calpain large subunit, C-terminal domain (domain IV) species: Rat (Rattus norvegicus), M-type [TaxId: 10116]
Score = 59.0 bits (142), Expect = 7e-11
Identities = 32/165 (19%), Positives = 63/165 (38%), Gaps = 18/165 (10%)
Query: 322 DEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFD--------VKHLMEAVK- 372
++ + F ++ ++ +S EL+ L +V + + K +++ +
Sbjct: 14 EDIGDGFRRLFAQLA-GEDAEISAFELQTILRRVLAKREDIKSDGFSIETCKIMVDMLDE 72
Query: 373 -NSSTLESLCENLPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQY 431
S L + + QK + +RE+D D S T+ E++ L + G L
Sbjct: 73 DGSGKLGLKEFYILWTKIQKYQKIYREIDVDRSGTMNSYEMRKALEEAGFKLPCQLHQVI 132
Query: 432 MEAGDIDGNGNIDSIEFVNLMTDIYKLETPELLEKAFQYLDKNSD 476
+ D ID FV + + E+L K F+ LD +
Sbjct: 133 VARFA-DDELIIDFDNFVRCLVRL------EILFKIFKQLDPENT 170
|
| >d1df0a1 a.39.1.8 (A:515-700) Calpain large subunit, C-terminal domain (domain IV) {Rat (Rattus norvegicus), M-type [TaxId: 10116]} Length = 186 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Calpain large subunit, C-terminal domain (domain IV) species: Rat (Rattus norvegicus), M-type [TaxId: 10116]
Score = 37.1 bits (85), Expect = 0.002
Identities = 18/111 (16%), Positives = 49/111 (44%), Gaps = 1/111 (0%)
Query: 302 FRRMNKLKKLTIKVIVEYLPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTE 361
+++ + + Y+ + Q ++ + E+D D++GT++ E+R L + G L
Sbjct: 67 VDMLDEDGSGKLGLKEFYILWTKIQKYQKIYREIDVDRSGTMNSYEMRKALEEAGFKLPC 126
Query: 362 FDVKHLMEAVKNSSTLESLCENLP-TKEKQKLMEKFREMDTDNSDTLTLSE 411
+ ++ + + + + L + F+++D +N+ T+ L
Sbjct: 127 QLHQVIVARFADDELIIDFDNFVRCLVRLEILFKIFKQLDPENTGTIQLDL 177
|
| >d2sasa_ a.39.1.5 (A:) Sarcoplasmic calcium-binding protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]} Length = 185 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Sarcoplasmic calcium-binding protein species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]
Score = 58.9 bits (141), Expect = 7e-11
Identities = 22/176 (12%), Positives = 50/176 (28%), Gaps = 35/176 (19%)
Query: 320 LPDEETQALKEKFIEM-DTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNSSTLE 378
L D + Q +K F D + +G++ ++ +T+ + ++++ S E
Sbjct: 2 LNDFQKQKIKFTFDFFLDMNHDGSIQDNDFEDMMTRYKEVNKGSLSDADYKSMQASLEDE 61
Query: 379 --------------------------------SLCENLPTKEKQKLMEKFREMDTDNSDT 406
+LP + ++ F+ MD
Sbjct: 62 WRDLKGRADINKDDVVSWEEYLAMWEKTIATCKSVADLPAWCQNRIPFLFKGMDVSGDGI 121
Query: 407 LTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIYKLETPE 462
+ L E + L+ ++V G D + L + +
Sbjct: 122 VDLEEFQNYCKNFQ--LQCADVPAVYNVITDGGKVTFDLNRYKELYYRLLTSPAAD 175
|
| >d1m45a_ a.39.1.5 (A:) Myosin Light Chain Mlc1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 146 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Myosin Light Chain Mlc1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 58.2 bits (139), Expect = 8e-11
Identities = 29/143 (20%), Positives = 61/143 (42%), Gaps = 15/143 (10%)
Query: 325 TQALKEKFIEMDTDKNGTLSYDELRAGLTKVG---------------SMLTEFDVKHLME 369
T+A K+ F D G ++ D L L +G S L + L +
Sbjct: 1 TRANKDIFTLFDKKGQGAIAKDSLGDYLRAIGYNPTNQLVQDIINADSSLRDASSLTLDQ 60
Query: 370 AVKNSSTLESLCENLPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVN 429
E + + + ++ F+ D +++ +++ +L+ L LG L ++EV+
Sbjct: 61 ITGLIEVNEKELDATTKAKTEDFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVD 120
Query: 430 QYMEAGDIDGNGNIDSIEFVNLM 452
+ ++ ++D NG ID +F+ +
Sbjct: 121 ELLKGVEVDSNGEIDYKKFIEDV 143
|
| >d2scpa_ a.39.1.5 (A:) Sarcoplasmic calcium-binding protein {Sandworm (Nereis diversicolor) [TaxId: 126592]} Length = 174 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Sarcoplasmic calcium-binding protein species: Sandworm (Nereis diversicolor) [TaxId: 126592]
Score = 58.5 bits (140), Expect = 9e-11
Identities = 24/162 (14%), Positives = 50/162 (30%), Gaps = 26/162 (16%)
Query: 322 DEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVK------------HLME 369
D Q +K F +D DK+G ++ + + +
Sbjct: 2 DLWVQKMKTYFNRIDFDKDGAITRMDFESMAERFAKESEMKAEHAKVLMDSLTGVWDNFL 61
Query: 370 AVKNSSTLESLCENL------------PTKEKQKLMEKFREMDTDNSDTLTLSELKAGLA 417
+ + + L FR +DT+ + ++ E
Sbjct: 62 TAVAGGKGIDETTFINSMKEMVKNPEAKSVVEGPLPLFFRAVDTNEDNNISRDEYGIFFG 121
Query: 418 KLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIYKLE 459
LG L+++ +A D + +G + EFV +D + +
Sbjct: 122 MLG--LDKTMAPASFDAIDTNNDGLLSLEEFVIAGSDFFMND 161
|
| >d1rwya_ a.39.1.4 (A:) Parvalbumin {Rat (Rattus rattus) [TaxId: 10117]} Length = 109 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Parvalbumin species: Rat (Rattus rattus) [TaxId: 10117]
Score = 56.5 bits (136), Expect = 1e-10
Identities = 27/108 (25%), Positives = 44/108 (40%), Gaps = 9/108 (8%)
Query: 355 VGSMLTEFDVKHLMEAVKNSSTLE-----SLCENLPTKEKQKLMEKFREMDTDNSDTLTL 409
+ +L+ D+K + A + + + + L K + + F +D D S +
Sbjct: 2 MTDLLSAEDIKKAIGAFTAADSFDHKKFFQMV-GLKKKSADDVKKVFHILDKDKSGFIEE 60
Query: 410 SELKAGLAKLGS---ALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTD 454
EL + L S L E M AGD DG+G I EF L+ +
Sbjct: 61 DELGSILKGFSSDARDLSAKETKTLMAAGDKDGDGKIGVEEFSTLVAE 108
|
| >d1c7va_ a.39.1.5 (A:) Calcium vector protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]} Length = 68 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium vector protein species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]
Score = 54.8 bits (132), Expect = 1e-10
Identities = 20/64 (31%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 390 QKLMEKFREMDTDNSDTLTLSELKAGLAKLG-SALEESEVNQYMEAGDIDGNGNIDSIEF 448
++++ F+ D + + E K + K+G L ++EV + M+ D DGNG ID EF
Sbjct: 2 EEILRAFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNGVIDIPEF 61
Query: 449 VNLM 452
++L+
Sbjct: 62 MDLI 65
|
| >d1c7va_ a.39.1.5 (A:) Calcium vector protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]} Length = 68 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium vector protein species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]
Score = 35.6 bits (82), Expect = 8e-04
Identities = 12/45 (26%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Query: 328 LKEKFIEMDTDKNGTLSYDELRAGLTKVGSM-LTEFDVKHLMEAV 371
+ F D + +G + +DE + + KVG LT+ +V+ M+
Sbjct: 4 ILRAFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEA 48
|
| >d2pvba_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]} Length = 107 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Parvalbumin species: Pike (Esox lucius) [TaxId: 8010]
Score = 55.7 bits (134), Expect = 2e-10
Identities = 25/103 (24%), Positives = 43/103 (41%), Gaps = 9/103 (8%)
Query: 359 LTEFDVKHLMEAVKNSSTLE-----SLCENLPTKEKQKLMEKFREMDTDNSDTLTLSELK 413
L + DV + A + + + + L +K + + F +D D S + ELK
Sbjct: 5 LKDADVAAALAACSAADSFKHKEFFAKV-GLASKSLDDVKKAFYVIDQDKSGFIEEDELK 63
Query: 414 AGLAKLGS---ALEESEVNQYMEAGDIDGNGNIDSIEFVNLMT 453
L AL ++E ++ GD DG+G I EF ++
Sbjct: 64 LFLQNFSPSARALTDAETKAFLADGDKDGDGMIGVDEFAAMIK 106
|
| >d2pvba_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]} Length = 107 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Parvalbumin species: Pike (Esox lucius) [TaxId: 8010]
Score = 35.3 bits (81), Expect = 0.003
Identities = 9/56 (16%), Positives = 25/56 (44%), Gaps = 4/56 (7%)
Query: 421 SALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIYKLETPELLEKAFQYLDKNSD 476
+ L++++V + A + EF + ++ + ++KAF +D++
Sbjct: 3 AGLKDADVAAALAACSAA--DSFKHKEFFAKVGL--ASKSLDDVKKAFYVIDQDKS 54
|
| >d1f54a_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 77 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 54.6 bits (131), Expect = 2e-10
Identities = 27/76 (35%), Positives = 41/76 (53%)
Query: 382 ENLPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNG 441
NL ++ + E F D DN+ +++ SEL + LG + E+EVN M D+DGN
Sbjct: 2 SNLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNH 61
Query: 442 NIDSIEFVNLMTDIYK 457
I+ EF+ LM+ K
Sbjct: 62 QIEFSEFLALMSRQLK 77
|
| >d1f54a_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 77 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 41.5 bits (97), Expect = 1e-05
Identities = 17/52 (32%), Positives = 26/52 (50%)
Query: 320 LPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAV 371
L +E+ KE F D D NG++S EL + +G +E +V LM +
Sbjct: 4 LTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEI 55
|
| >d1hqva_ a.39.1.8 (A:) Apoptosis-linked protein alg-2 {Mouse (Mus musculus) [TaxId: 10090]} Length = 181 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Apoptosis-linked protein alg-2 species: Mouse (Mus musculus) [TaxId: 10090]
Score = 57.0 bits (136), Expect = 3e-10
Identities = 31/161 (19%), Positives = 57/161 (35%), Gaps = 9/161 (5%)
Query: 319 YLPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNSSTLE 378
+ L F +D D++G +S +EL+ L+ + ++ +
Sbjct: 12 GAALPDQSFLWNVFQRVDKDRSGVISDNELQQALSNGTWTPFNPVTVRSIISMFDRENKA 71
Query: 379 SLCENLP---TKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAG 435
+ + K FR D DNS + +ELK L+ G L + + +
Sbjct: 72 GVNFSEFTGVWKYITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKF 131
Query: 436 DIDGNGNIDSIEFVNLMTDIYKLETPELLEKAFQYLDKNSD 476
D G G I +F+ + + L F+ D + D
Sbjct: 132 DRQGRGQIAFDDFIQGCIVL------QRLTDIFRRYDTDQD 166
|
| >d1jc2a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} Length = 75 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus) [TaxId: 9031]
Score = 53.8 bits (129), Expect = 4e-10
Identities = 19/74 (25%), Positives = 35/74 (47%)
Query: 382 ENLPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNG 441
E+ K +++L FR D + + + EL L G + E ++ M+ D + +G
Sbjct: 1 EDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVIEEDIEDLMKDSDKNNDG 60
Query: 442 NIDSIEFVNLMTDI 455
ID EF+ +M +
Sbjct: 61 RIDFDEFLKMMEGV 74
|
| >d1auib_ a.39.1.5 (B:) Calcineurin regulatory subunit (B-chain) {Human (Homo sapiens) [TaxId: 9606]} Length = 165 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcineurin regulatory subunit (B-chain) species: Human (Homo sapiens) [TaxId: 9606]
Score = 56.2 bits (134), Expect = 4e-10
Identities = 34/151 (22%), Positives = 62/151 (41%), Gaps = 12/151 (7%)
Query: 319 YLPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGS-----MLTEFDVKHLMEAVKN 373
+ +E + L ++F ++D D +G+LS +E + + ++ FD E
Sbjct: 9 HFDADEIKRLGKRFKKLDLDNSGSLSVEEFMSLPELQQNPLVQRVIDIFDTDGNGEVDFK 68
Query: 374 SSTLESLCENLPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAK-----LGSALEESEV 428
++ ++QKL FR D D ++ EL L L + V
Sbjct: 69 EFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIV 128
Query: 429 NQYMEAGDIDGNGNIDSIEFVNLM--TDIYK 457
++ + D DG+G I EF ++ DI+K
Sbjct: 129 DKTIINADKDGDGRISFEEFCAVVGGLDIHK 159
|
| >d1nyaa_ a.39.1.5 (A:) Calerythrin {Saccharopolyspora erythraea [TaxId: 1836]} Length = 176 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calerythrin species: Saccharopolyspora erythraea [TaxId: 1836]
Score = 56.6 bits (135), Expect = 4e-10
Identities = 27/165 (16%), Positives = 48/165 (29%), Gaps = 33/165 (20%)
Query: 323 EETQALKEKFIEMDTDKNGTLSYDELRAGLTKV----GSMLTEFDVKHLM---------- 368
+ LK++F D D NG L + + G +V+ L
Sbjct: 4 IASDRLKKRFDRWDFDGNGALERADFEKEAQHIAEAFGKDAGAAEVQTLKNAFGGLFDYL 63
Query: 369 --EAVKNSSTLESLCE---------------NLPTKEKQKLMEKFREMDTDNSDTLTLSE 411
EA S + + + + D + + E
Sbjct: 64 AKEAGVGSDGSLTEEQFIRVTENLIFEQGEASFNRVLGPVVKGIVGMCDKNADGQINADE 123
Query: 412 LKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIY 456
A L LG ++E + D +GNG + E + + D +
Sbjct: 124 FAAWLTALGM--SKAEAAEAFNQVDTNGNGELSLDELLTAVRDFH 166
|
| >d1wdcb_ a.39.1.5 (B:) Myosin Essential Chain {Bay scallop (Aequipecten irradians) [TaxId: 31199]} Length = 142 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Myosin Essential Chain species: Bay scallop (Aequipecten irradians) [TaxId: 31199]
Score = 55.8 bits (133), Expect = 5e-10
Identities = 24/140 (17%), Positives = 60/140 (42%), Gaps = 6/140 (4%)
Query: 320 LPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEA-----VKNS 374
LP ++ Q +KE F +D D++G +S ++++A ++G + ++ +++
Sbjct: 1 LPQKQIQEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLKEAPGPLNFTM 60
Query: 375 STLESLCENLPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEA 434
+ T ++ + F D + L + +K L +G + E+ +
Sbjct: 61 FLSIFSDKLSGTDSEETIRNAFAMFDEQETKKLNIEYIKDLLENMGDNFNKDEMRMTFKE 120
Query: 435 GDIDGNGNIDSIEFVNLMTD 454
++G G D ++F ++
Sbjct: 121 APVEG-GKFDYVKFTAMIKG 139
|
| >d2zfda1 a.39.1.5 (A:32-214) Calcineurin B-like protein 2 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 183 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcineurin B-like protein 2 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 55.3 bits (132), Expect = 1e-09
Identities = 28/162 (17%), Positives = 57/162 (35%), Gaps = 23/162 (14%)
Query: 323 EETQALKEKFIEMDTD--KNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNSSTLESL 380
E +AL E F ++ + +G ++ +E + L K + F + + +
Sbjct: 14 SEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGILGF 73
Query: 381 CE--------NLPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGS--------ALE 424
E + K+ F+ D + E+K + + +
Sbjct: 74 EEFARALSVFHPNAPIDDKIHFSFQLYDLKQQGFIERQEVKQMVVATLAESGMNLKDTVI 133
Query: 425 ESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIYKLETPELLEK 466
E +++ E D +G ID E+ +L+ L P LL+
Sbjct: 134 EDIIDKTFEEADTKHDGKIDKEEWRSLV-----LRHPSLLKN 170
|
| >d1ij5a_ a.39.1.9 (A:) Cbp40 (plasmodial specific CaII-binding protein LAV1-2) {Physarum polycephalum [TaxId: 5791]} Length = 321 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Cbp40 (plasmodial specific CaII-binding protein LAV1-2) domain: Cbp40 (plasmodial specific CaII-binding protein LAV1-2) species: Physarum polycephalum [TaxId: 5791]
Score = 56.9 bits (136), Expect = 1e-09
Identities = 36/259 (13%), Positives = 78/259 (30%), Gaps = 34/259 (13%)
Query: 252 ISSTAKDLVRRMLTKDPKRR--ITAAQVLEHPWLRESGEASDDTSVILRMKQFRRMNKLK 309
I+ ++ ++ D K + A + E G+A+ + + + + +
Sbjct: 46 IAQKEQEQKAKLAEYDQKVQNEFDARERAEREREAARGDAAAEKQRLASLLKDLEDDASG 105
Query: 310 KLTIKVIVEYLPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLME 369
++ L +E+T L++ F+ +G S+ +L+ L K + E +K L
Sbjct: 106 YNRLRPSKPMLSEEDTNILRQLFLSSAVSGSGKFSFQDLKQVLAKYADTIPEGPLKKLFV 165
Query: 370 AVKNSSTLESLCENL-----PTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALE 424
V+N + L K E L +++
Sbjct: 166 MVENDTKGRMSYITLVAVANDLAALVADFRKIDTNSNGTLSRKEFREHFVRLGFDKKSVQ 225
Query: 425 ESEVNQYMEAG--------------------------DIDGNGNIDSIEFVNLMTDIYKL 458
++ E D D +G + E ++ D +
Sbjct: 226 DALFRYADEDESDDVGFSEYVHLGLCLLVLRILYAFADFDKSGQLSKEEVQKVLEDAHIP 285
Query: 459 E-TPELLEKAFQYLDKNSD 476
E + E F +D +
Sbjct: 286 ESARKKFEHQFSVVDVDDS 304
|
| >d1ij5a_ a.39.1.9 (A:) Cbp40 (plasmodial specific CaII-binding protein LAV1-2) {Physarum polycephalum [TaxId: 5791]} Length = 321 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Cbp40 (plasmodial specific CaII-binding protein LAV1-2) domain: Cbp40 (plasmodial specific CaII-binding protein LAV1-2) species: Physarum polycephalum [TaxId: 5791]
Score = 49.6 bits (117), Expect = 4e-07
Identities = 19/143 (13%), Positives = 46/143 (32%), Gaps = 11/143 (7%)
Query: 298 RMKQFRRMNKLKKLTIKVIVEYLPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGS 357
R++ + ++ + EY + + + E + + + A ++ S
Sbjct: 41 RLEAQIAQKEQEQ--KAKLAEYDQKVQNEFDARERAERER----EAARGDAAAEKQRLAS 94
Query: 358 MLTEFDVKHLMEAVKNSSTLESLCENLPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLA 417
+L + + + L L ++ L + F S + +LK LA
Sbjct: 95 LLKDLEDDA-----SGYNRLRPSKPMLSEEDTNILRQLFLSSAVSGSGKFSFQDLKQVLA 149
Query: 418 KLGSALEESEVNQYMEAGDIDGN 440
K + E + + + D
Sbjct: 150 KYADTIPEGPLKKLFVMVENDTK 172
|
| >d1ij5a_ a.39.1.9 (A:) Cbp40 (plasmodial specific CaII-binding protein LAV1-2) {Physarum polycephalum [TaxId: 5791]} Length = 321 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Cbp40 (plasmodial specific CaII-binding protein LAV1-2) domain: Cbp40 (plasmodial specific CaII-binding protein LAV1-2) species: Physarum polycephalum [TaxId: 5791]
Score = 45.8 bits (107), Expect = 6e-06
Identities = 13/64 (20%), Positives = 23/64 (35%), Gaps = 1/64 (1%)
Query: 390 QKLMEKFREMDTDNSDTLTLSELKAGLAKLG-SALEESEVNQYMEAGDIDGNGNIDSIEF 448
L + D D S L+ E++ L + D+D + ++ EF
Sbjct: 253 LVLRILYAFADFDKSGQLSKEEVQKVLEDAHIPESARKKFEHQFSVVDVDDSKSLSYQEF 312
Query: 449 VNLM 452
V L+
Sbjct: 313 VMLV 316
|
| >d1wdcc_ a.39.1.5 (C:) Myosin Regulatory Chain {Bay scallop (Aequipecten irradians) [TaxId: 31199]} Length = 152 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Myosin Regulatory Chain species: Bay scallop (Aequipecten irradians) [TaxId: 31199]
Score = 53.1 bits (126), Expect = 4e-09
Identities = 31/147 (21%), Positives = 53/147 (36%), Gaps = 13/147 (8%)
Query: 320 LPDEETQALKEKFIEMDTDKN--GTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNSSTL 377
L +E LK+ F D G + +L +G DV + K
Sbjct: 1 LSQDEIDDLKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRNEDVFAVGGTHKMGEKS 60
Query: 378 ESLCENLPTKEKQKLMEKFRE---------MDTDNSDTLTLSELKAGLAKLGSALEESEV 428
E LP E E+ D + ++ +EL+ L LG L + +V
Sbjct: 61 LPFEEFLPAYEGLMDCEQGTFADYMEAFKTFDREGQGFISGAELRHVLTALGERLSDEDV 120
Query: 429 NQYMEAGDI--DGNGNIDSIEFVNLMT 453
++ ++ D+ D GN+ +FV +
Sbjct: 121 DEIIKLTDLQEDLEGNVKYEDFVKKVM 147
|
| >d1wrka1 a.39.1.5 (A:4-85) Troponin C {Human (Homo sapiens), cardiac isoform [TaxId: 9606]} Length = 82 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Human (Homo sapiens), cardiac isoform [TaxId: 9606]
Score = 50.7 bits (121), Expect = 6e-09
Identities = 18/73 (24%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
Query: 382 ENLPTKEKQKLMEKFREMDTDNSD-TLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGN 440
E L ++K + F D +++ EL + LG E+ + ++ D DG+
Sbjct: 7 EQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGS 66
Query: 441 GNIDSIEFVNLMT 453
G +D EF+ +M
Sbjct: 67 GTVDFDEFLVMMV 79
|
| >d1wrka1 a.39.1.5 (A:4-85) Troponin C {Human (Homo sapiens), cardiac isoform [TaxId: 9606]} Length = 82 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Human (Homo sapiens), cardiac isoform [TaxId: 9606]
Score = 40.0 bits (93), Expect = 3e-05
Identities = 14/59 (23%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Query: 314 KVIVEYLPDEETQALKEKFIEMDTD-KNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAV 371
K VE L +E+ K F ++G++S EL + +G T +++ +++ V
Sbjct: 3 KAAVEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEV 61
|
| >d1jfja_ a.39.1.5 (A:) EHCABP {Entamoeba (Entamoeba histolytica) [TaxId: 5759]} Length = 134 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: EHCABP species: Entamoeba (Entamoeba histolytica) [TaxId: 5759]
Score = 51.7 bits (122), Expect = 8e-09
Identities = 28/132 (21%), Positives = 57/132 (43%), Gaps = 15/132 (11%)
Query: 332 FIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNSSTLESLCEN-------- 383
F E+D + +G +SY+E++A ++K ++ E ++ + +++ E
Sbjct: 6 FKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYGSI 65
Query: 384 ---LPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGN 440
+ +K L ++ MD D LT E+ + K G +V + + D +G+
Sbjct: 66 QGQDLSDDKIGLKVLYKLMDVDGDGKLTKEEVTSFFKKHG----IEKVAEQVMKADANGD 121
Query: 441 GNIDSIEFVNLM 452
G I EF+
Sbjct: 122 GYITLEEFLEFS 133
|
| >d1bjfa_ a.39.1.5 (A:) Neurocalcin {Cow (Bos taurus) [TaxId: 9913]} Length = 181 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Neurocalcin species: Cow (Bos taurus) [TaxId: 9913]
Score = 52.9 bits (126), Expect = 8e-09
Identities = 21/103 (20%), Positives = 42/103 (40%), Gaps = 5/103 (4%)
Query: 377 LESLCE--NLPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESE-VNQYME 433
++ L E + E Q+ + F + S L++ E K + S+
Sbjct: 9 MQDLLESTDFTEHEIQEWYKGF--LRDCPSGHLSMEEFKKIYGNFFPYGDASKFAEHVFR 66
Query: 434 AGDIDGNGNIDSIEFVNLMTDIYKLETPELLEKAFQYLDKNSD 476
D +G+G ID EF+ ++ + + + L+ AF D + +
Sbjct: 67 TFDANGDGTIDFREFIIALSVTSRGKLEQKLKWAFSMYDLDGN 109
|
| >d1bjfa_ a.39.1.5 (A:) Neurocalcin {Cow (Bos taurus) [TaxId: 9913]} Length = 181 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Neurocalcin species: Cow (Bos taurus) [TaxId: 9913]
Score = 50.2 bits (119), Expect = 7e-08
Identities = 28/186 (15%), Positives = 57/186 (30%), Gaps = 31/186 (16%)
Query: 307 KLKKLTIKVIVE--YLPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFD- 363
KL+ ++ ++E + E Q + F + +G LS +E +
Sbjct: 3 KLRPEVMQDLLESTDFTEHEIQEWYKGF--LRDCPSGHLSMEEFKKIYGNFFPYGDASKF 60
Query: 364 VKHLMEAV-KNSSTLESLCE-------NLPTKEKQKLMEKFREMDTDNSDTLTLSELKAG 415
+H+ N E K +QKL F D D + ++ +E+
Sbjct: 61 AEHVFRTFDANGDGTIDFREFIIALSVTSRGKLEQKLKWAFSMYDLDGNGYISKAEMLEI 120
Query: 416 LAK------------LGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIYKLETPEL 463
+ + E + D + +G + EF+ P +
Sbjct: 121 VQAIYKMVSSVMKMPEDESTPEKRTEKIFRQMDTNRDGKLSLEEFIRGA-----KSDPSI 175
Query: 464 LEKAFQ 469
+ + Q
Sbjct: 176 V-RLLQ 180
|
| >d2opoa1 a.39.1.10 (A:6-86) Polcalcin Che a 3 {Pigweed (Chenopodium album) [TaxId: 3559]} Length = 81 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Polcalcin domain: Polcalcin Che a 3 species: Pigweed (Chenopodium album) [TaxId: 3559]
Score = 50.3 bits (120), Expect = 9e-09
Identities = 23/82 (28%), Positives = 35/82 (42%), Gaps = 3/82 (3%)
Query: 387 KEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSI 446
++ F+ DT+ ++ SEL L LGS + EV + M D DG+G I
Sbjct: 3 QDIADRERIFKRFDTNGDGKISSSELGDALKTLGSVTPD-EVRRMMAEIDTDGDGFISFD 61
Query: 447 EFVNLMTDIYKLETPELLEKAF 468
EF + L + + K F
Sbjct: 62 EFTDFARANRGLV--KDVSKIF 81
|
| >d2opoa1 a.39.1.10 (A:6-86) Polcalcin Che a 3 {Pigweed (Chenopodium album) [TaxId: 3559]} Length = 81 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Polcalcin domain: Polcalcin Che a 3 species: Pigweed (Chenopodium album) [TaxId: 3559]
Score = 34.5 bits (79), Expect = 0.003
Identities = 14/104 (13%), Positives = 31/104 (29%), Gaps = 29/104 (27%)
Query: 322 DEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNSSTLESLC 381
++ + F DT+ +G +S EL L
Sbjct: 2 PQDIADRERIFKRFDTNGDGKISSSELGDALKT--------------------------L 35
Query: 382 ENLPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEE 425
++ E +++ E+DTD ++ E +++
Sbjct: 36 GSVTPDEVRRM---MAEIDTDGDGFISFDEFTDFARANRGLVKD 76
|
| >d1avsa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} Length = 81 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus) [TaxId: 9031]
Score = 50.0 bits (119), Expect = 1e-08
Identities = 20/74 (27%), Positives = 32/74 (43%)
Query: 384 LPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNI 443
L + + F D D ++ EL + LG + E++ +E D DG+G I
Sbjct: 8 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTI 67
Query: 444 DSIEFVNLMTDIYK 457
D EF+ +M K
Sbjct: 68 DFEEFLVMMVRQMK 81
|
| >d1avsa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} Length = 81 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus) [TaxId: 9031]
Score = 38.8 bits (90), Expect = 9e-05
Identities = 14/54 (25%), Positives = 24/54 (44%)
Query: 318 EYLPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAV 371
+L +E K F D D G +S EL + +G T+ ++ ++E V
Sbjct: 6 AFLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEV 59
|
| >d1fi5a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]} Length = 81 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]
Score = 50.0 bits (119), Expect = 1e-08
Identities = 21/74 (28%), Positives = 38/74 (51%)
Query: 382 ENLPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNG 441
++ K +++L + FR D + + L ELK L G + E ++ + M+ GD + +G
Sbjct: 7 DDSKGKTEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDG 66
Query: 442 NIDSIEFVNLMTDI 455
ID EF+ M +
Sbjct: 67 RIDYDEFLEFMKGV 80
|
| >d1fw4a_ a.39.1.5 (A:) Calmodulin {Cow (Bos taurus) [TaxId: 9913]} Length = 65 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Cow (Bos taurus) [TaxId: 9913]
Score = 49.2 bits (117), Expect = 1e-08
Identities = 21/63 (33%), Positives = 38/63 (60%)
Query: 390 QKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFV 449
+++ E FR D D + ++ +EL+ + LG L + EV++ + DIDG+G ++ EFV
Sbjct: 3 EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 62
Query: 450 NLM 452
+M
Sbjct: 63 QMM 65
|
| >d1cb1a_ a.39.1.1 (A:) Calbindin D9K {Pig (Sus scrofa) [TaxId: 9823]} Length = 78 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calbindin D9K domain: Calbindin D9K species: Pig (Sus scrofa) [TaxId: 9823]
Score = 49.4 bits (118), Expect = 2e-08
Identities = 15/75 (20%), Positives = 30/75 (40%), Gaps = 4/75 (5%)
Query: 387 KEKQKLMEKFREMDT--DNSDTLTLSELKAGLAKLGSAL--EESEVNQYMEAGDIDGNGN 442
K +L F + + + L+ ELK + +L ++ + D +G+G
Sbjct: 4 KSPAELKSIFEKYAAKEGDPNQLSKEELKQLIQAEFPSLLKGPRTLDDLFQELDKNGDGE 63
Query: 443 IDSIEFVNLMTDIYK 457
+ EF L+ I +
Sbjct: 64 VSFEEFQVLVKKISQ 78
|
| >d2pq3a1 a.39.1.5 (A:3-75) Calmodulin {Rattus norvegicus [TaxId: 10116]} Length = 73 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Rattus norvegicus [TaxId: 10116]
Score = 49.2 bits (117), Expect = 2e-08
Identities = 23/70 (32%), Positives = 33/70 (47%)
Query: 384 LPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNI 443
L ++ + E F D D T+T EL + LG E+E+ + D DGNG I
Sbjct: 2 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 61
Query: 444 DSIEFVNLMT 453
D EF+ +M
Sbjct: 62 DFPEFLTMMA 71
|
| >d2pq3a1 a.39.1.5 (A:3-75) Calmodulin {Rattus norvegicus [TaxId: 10116]} Length = 73 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Rattus norvegicus [TaxId: 10116]
Score = 37.7 bits (87), Expect = 2e-04
Identities = 15/52 (28%), Positives = 27/52 (51%)
Query: 320 LPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAV 371
L +E+ KE F D D +GT++ EL + +G TE +++ ++ V
Sbjct: 2 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEV 53
|
| >d1s6ca_ a.39.1.5 (A:) Kchip1, Kv4 potassium channel-interacting protein {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 178 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Kchip1, Kv4 potassium channel-interacting protein species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 49.4 bits (117), Expect = 1e-07
Identities = 26/184 (14%), Positives = 56/184 (30%), Gaps = 47/184 (25%)
Query: 305 MNKLKKLTIKVIVEYLPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDV 364
+ +L+ T E Q L F + +G ++ + + +
Sbjct: 1 LEQLEAQT------NFTKRELQVLYRGF--KNECPSGVVNEETFKQIYAQFFPHGDASTY 52
Query: 365 KHLMEAVKNSSTLESLCENLPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALE 424
H + F DT + ++ + L+ L
Sbjct: 53 AHYL---------------------------FNAFDTTQTGSVKFEDFVTALSILLRGTV 85
Query: 425 ESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIYKL------------ETPELLEKAFQYLD 472
++ DI+ +G I+ E ++++ IY + + ++ FQ +D
Sbjct: 86 HEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMD 145
Query: 473 KNSD 476
KN D
Sbjct: 146 KNKD 149
|
| >d1g8ia_ a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1) {Human (Homo sapiens) [TaxId: 9606]} Length = 187 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Frequenin (neuronal calcium sensor 1) species: Human (Homo sapiens) [TaxId: 9606]
Score = 49.4 bits (117), Expect = 1e-07
Identities = 19/103 (18%), Positives = 39/103 (37%), Gaps = 5/103 (4%)
Query: 377 LESLCE--NLPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESE-VNQYME 433
+E L KE Q+ + F + S L + + + + ++
Sbjct: 10 VEELTRKTYFTEKEVQQWYKGF--IKDCPSGQLDAAGFQKIYKQFFPFGDPTKFATFVFN 67
Query: 434 AGDIDGNGNIDSIEFVNLMTDIYKLETPELLEKAFQYLDKNSD 476
D + +G I+ EF+ ++ + E L AF+ D ++D
Sbjct: 68 VFDENKDGRIEFSEFIQALSVTSRGTLDEKLRWAFKLYDLDND 110
|
| >d1g8ia_ a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1) {Human (Homo sapiens) [TaxId: 9606]} Length = 187 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Frequenin (neuronal calcium sensor 1) species: Human (Homo sapiens) [TaxId: 9606]
Score = 46.7 bits (110), Expect = 1e-06
Identities = 26/190 (13%), Positives = 58/190 (30%), Gaps = 31/190 (16%)
Query: 307 KLKKLTIKVIVE--YLPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFD- 363
KLK ++ + Y ++E Q + F + +G L + +
Sbjct: 4 KLKPEVVEELTRKTYFTEKEVQQWYKGF--IKDCPSGQLDAAGFQKIYKQFFPFGDPTKF 61
Query: 364 VKHLMEAVKNSST--------LESLCENLPTKEKQKLMEKFREMDTDNSDTLTLSELKAG 415
+ + +++L +KL F+ D DN +T +E+
Sbjct: 62 ATFVFNVFDENKDGRIEFSEFIQALSVTSRGTLDEKLRWAFKLYDLDNDGYITRNEMLDI 121
Query: 416 LAKLGSALEES------------EVNQYMEAGDIDGNGNIDSIEFVNLMTDIYKLETPEL 463
+ + + + V++ D + +G + EF P +
Sbjct: 122 VDAIYQMVGNTVELPEEENTPEKRVDRIFAMMDKNADGKLTLQEFQEGS-----KADPSI 176
Query: 464 LEKAFQYLDK 473
+ +A D
Sbjct: 177 V-QALSLYDG 185
|
| >d3c1va1 a.39.1.2 (A:2-94) Calcyclin (S100) {Human (Homo sapiens), s100a4 [TaxId: 9606]} Length = 93 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100a4 [TaxId: 9606]
Score = 46.4 bits (110), Expect = 2e-07
Identities = 14/76 (18%), Positives = 29/76 (38%), Gaps = 7/76 (9%)
Query: 387 KEKQKLMEKFREMDT--DNSDTLTLSELKAGLAKLGSAL-----EESEVNQYMEAGDIDG 439
K ++ F + + L SELK L + + +E+ + M D +
Sbjct: 6 KALDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDSNR 65
Query: 440 NGNIDSIEFVNLMTDI 455
+ +D E+ ++ I
Sbjct: 66 DNEVDFQEYCVFLSCI 81
|
| >d1tiza_ a.39.1.5 (A:) Calmodulin-related protein T21P5.17 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 67 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin-related protein T21P5.17 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 45.7 bits (108), Expect = 2e-07
Identities = 13/60 (21%), Positives = 29/60 (48%)
Query: 396 FREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDI 455
F + D + L+L E + + ++ ++ E D+DGNG +++ EF + + +
Sbjct: 7 FEKFDKNKDGKLSLDEFREVALAFSPYFTQEDIVKFFEEIDVDGNGELNADEFTSCIEKM 66
|
| >d1tiza_ a.39.1.5 (A:) Calmodulin-related protein T21P5.17 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 67 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin-related protein T21P5.17 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 36.1 bits (83), Expect = 5e-04
Identities = 19/93 (20%), Positives = 30/93 (32%), Gaps = 28/93 (30%)
Query: 327 ALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNSSTLESLCENLPT 386
+ K F + D +K+G LS DE R T+ D+
Sbjct: 2 SAKRVFEKFDKNKDGKLSLDEFREVALAFSPYFTQEDIVKF------------------- 42
Query: 387 KEKQKLMEKFREMDTDNSDTLTLSELKAGLAKL 419
F E+D D + L E + + K+
Sbjct: 43 ---------FEEIDVDGNGELNADEFTSCIEKM 66
|
| >d1ggwa_ a.39.1.5 (A:) Cdc4p {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 140 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Cdc4p species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Score = 47.7 bits (112), Expect = 2e-07
Identities = 22/138 (15%), Positives = 53/138 (38%), Gaps = 8/138 (5%)
Query: 323 EETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNSSTLESLCE 382
+ K+ F D G + + L G T ++ + + +E +
Sbjct: 2 TDDSPYKQAFSLFDRHGTGRIPKTSIGDLLRACGQNPTLAEITEIESTLPAEVDMEQFLQ 61
Query: 383 NLPTKE-------KQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAG 435
L ++ ++ F+ D D + + + EL+ L LG L E+++ ++
Sbjct: 62 VLNRPNGFDMPGDPEEFVKGFQVFDKDATGMIGVGELRYVLTSLGEKLSNEEMDELLKGV 121
Query: 436 DIDGNGNIDSIEFVNLMT 453
+ +G ++ +FV ++
Sbjct: 122 PVK-DGMVNYHDFVQMIL 138
|
| >d1wlza1 a.39.1.7 (A:229-311) DJ-1-binding protein, DJBP {Human (Homo sapiens) [TaxId: 9606]} Length = 83 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: EF-hand modules in multidomain proteins domain: DJ-1-binding protein, DJBP species: Human (Homo sapiens) [TaxId: 9606]
Score = 45.9 bits (108), Expect = 3e-07
Identities = 10/68 (14%), Positives = 30/68 (44%)
Query: 386 TKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDS 445
T + ++F DT ++T++ E +A + L + + ++ ++ G +
Sbjct: 16 TSHYHAITQEFENFDTMKTNTISREEFRAICNRRVQILTDEQFDRLWNEMPVNAKGRLKY 75
Query: 446 IEFVNLMT 453
+F++ +
Sbjct: 76 PDFLSRFS 83
|
| >d1jbaa_ a.39.1.5 (A:) Guanylate cyclase activating protein 2, GCAP-2 {Cow (Bos taurus) [TaxId: 9913]} Length = 189 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Guanylate cyclase activating protein 2, GCAP-2 species: Cow (Bos taurus) [TaxId: 9913]
Score = 47.9 bits (113), Expect = 4e-07
Identities = 18/90 (20%), Positives = 37/90 (41%), Gaps = 1/90 (1%)
Query: 388 EKQKLMEKFREMDTDNSD-TLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSI 446
+ +L E +++ + TL + E K + V A D +G+ ID +
Sbjct: 19 DAAQLQEWYKKFLEECPSGTLFMHEFKRFFKVPDNEEATQYVEAMFRAFDTNGDNTIDFL 78
Query: 447 EFVNLMTDIYKLETPELLEKAFQYLDKNSD 476
E+V + + + L+ F+ DK+ +
Sbjct: 79 EYVAALNLVLRGTLEHKLKWTFKIYDKDRN 108
|
| >d1jbaa_ a.39.1.5 (A:) Guanylate cyclase activating protein 2, GCAP-2 {Cow (Bos taurus) [TaxId: 9913]} Length = 189 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Guanylate cyclase activating protein 2, GCAP-2 species: Cow (Bos taurus) [TaxId: 9913]
Score = 40.6 bits (94), Expect = 1e-04
Identities = 26/168 (15%), Positives = 52/168 (30%), Gaps = 32/168 (19%)
Query: 323 EETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEA--------VKNS 374
+ Q +KF ++ +GTL E + + V+ + A +
Sbjct: 21 AQLQEWYKKF--LEECPSGTLFMHEFKRFFKVPDNEEATQYVEAMFRAFDTNGDNTIDFL 78
Query: 375 STLESLCENLPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLA----------------- 417
+ +L L + KL F+ D D + + EL +
Sbjct: 79 EYVAALNLVLRGTLEHKLKWTFKIYDKDRNGCIDRQELLDIVESIYKLKKACSVEVEAEQ 138
Query: 418 KLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIYKLETPELLE 465
+ E V++ D +G+G + EFV +++
Sbjct: 139 QGKLLTPEEVVDRIFLLVDENGDGQLSLNEFVEGA-----RRDKWVMK 181
|
| >d1qx2a_ a.39.1.1 (A:) Calbindin D9K {Cow (Bos taurus) [TaxId: 9913]} Length = 76 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calbindin D9K domain: Calbindin D9K species: Cow (Bos taurus) [TaxId: 9913]
Score = 44.5 bits (105), Expect = 6e-07
Identities = 16/75 (21%), Positives = 34/75 (45%), Gaps = 4/75 (5%)
Query: 387 KEKQKLMEKFREMDTD--NSDTLTLSELKAGLAKLG--SALEESEVNQYMEAGDIDGNGN 442
K +++ F + + ++ ELK + LG S +++ +E D +G+G
Sbjct: 2 KSPEEIKGAFEVFAAKEGDPNQISKEELKLVMQTLGPSLLKGMSTLDEMIEEVDKNGDGE 61
Query: 443 IDSIEFVNLMTDIYK 457
+ EF+ +M I +
Sbjct: 62 VSFEEFLVMMKKISQ 76
|
| >d1fpwa_ a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 190 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Frequenin (neuronal calcium sensor 1) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 46.7 bits (110), Expect = 1e-06
Identities = 30/184 (16%), Positives = 61/184 (33%), Gaps = 43/184 (23%)
Query: 307 KLKKLTIKVIVE--YLPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDV 364
KL K + + + Y E Q + F + +G L+ ++ + + D
Sbjct: 7 KLSKDDLTCLKQSTYFDRREIQQWHKGF--LRDCPSGQLAREDFVKIYKQFFPFGSPEDF 64
Query: 365 KHLMEAVKNSSTLESLCENLPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALE 424
+ + F D DN+ + E L+
Sbjct: 65 ANHL---------------------------FTVFDKDNNGFIHFEEFITVLSTTSRGTL 97
Query: 425 ESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIYKL------------ETPELLEKAFQYLD 472
E +++ E D++ +G I E + ++ +YK+ ++K F+ +D
Sbjct: 98 EEKLSWAFELYDLNHDGYITFDEMLTIVASVYKMMGSMVTLNEDEATPEMRVKKIFKLMD 157
Query: 473 KNSD 476
KN D
Sbjct: 158 KNED 161
|
| >d1fpwa_ a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 190 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Frequenin (neuronal calcium sensor 1) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 37.1 bits (85), Expect = 0.002
Identities = 19/166 (11%), Positives = 50/166 (30%), Gaps = 22/166 (13%)
Query: 257 KDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASDDTSVILRMKQFRRMNKLKKLTIKVI 316
+ + L P ++ ++ ++ + + + +
Sbjct: 28 QQWHKGFLRDCPSGQLAREDFVK--IYKQFFPFGSPEDFANHLFTVFDKDNNGFIHFEEF 85
Query: 317 VEY----LPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVK 372
+ + L F D + +G +++DE+ + V M+ + EA
Sbjct: 86 ITVLSTTSRGTLEEKLSWAFELYDLNHDGYITFDEMLTIVASVYKMMGSMVTLNEDEAT- 144
Query: 373 NSSTLESLCENLPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAK 418
+ ++ + F+ MD + +TL E + G
Sbjct: 145 ---------------PEMRVKKIFKLMDKNEDGYITLDEFREGSKV 175
|
| >d2fcea1 a.39.1.5 (A:84-144) Calmodulin {Cow (Bos taurus) [TaxId: 9913]} Length = 61 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Cow (Bos taurus) [TaxId: 9913]
Score = 43.5 bits (102), Expect = 1e-06
Identities = 15/59 (25%), Positives = 36/59 (61%)
Query: 391 KLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFV 449
++ F+ D +++ +++ +L+ L LG L ++EV++ ++ ++D NG ID +F+
Sbjct: 2 DFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNGEIDYKKFI 60
|
| >d1snla_ a.39.1.7 (A:) Nucleobindin 1 (CALNUC) {Human (Homo sapiens) [TaxId: 9606]} Length = 99 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: EF-hand modules in multidomain proteins domain: Nucleobindin 1 (CALNUC) species: Human (Homo sapiens) [TaxId: 9606]
Score = 43.1 bits (101), Expect = 4e-06
Identities = 19/97 (19%), Positives = 34/97 (35%), Gaps = 12/97 (12%)
Query: 322 DEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNSSTLESLC 381
D K FI D + +G L EL A TK + + + + + +
Sbjct: 12 DPNRFNPKTFFILHDINSDGVLDEQELEALFTKELEKVYDPKNEE-DDMREMEEERLRMR 70
Query: 382 ENLPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAK 418
E++ + +DT+ +TL E A +
Sbjct: 71 EHV-----------MKNVDTNQDRLVTLEEFLASTQR 96
|
| >d1snla_ a.39.1.7 (A:) Nucleobindin 1 (CALNUC) {Human (Homo sapiens) [TaxId: 9606]} Length = 99 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: EF-hand modules in multidomain proteins domain: Nucleobindin 1 (CALNUC) species: Human (Homo sapiens) [TaxId: 9606]
Score = 40.8 bits (95), Expect = 3e-05
Identities = 11/84 (13%), Positives = 23/84 (27%), Gaps = 16/84 (19%)
Query: 386 TKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESE----------------VN 429
+ F D ++ L EL+A K + + +
Sbjct: 12 DPNRFNPKTFFILHDINSDGVLDEQELEALFTKELEKVYDPKNEEDDMREMEEERLRMRE 71
Query: 430 QYMEAGDIDGNGNIDSIEFVNLMT 453
M+ D + + + EF+
Sbjct: 72 HVMKNVDTNQDRLVTLEEFLASTQ 95
|
| >d1a4pa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), P11 s100a10, calpactin [TaxId: 9606]} Length = 92 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), P11 s100a10, calpactin [TaxId: 9606]
Score = 42.3 bits (99), Expect = 8e-06
Identities = 13/74 (17%), Positives = 28/74 (37%), Gaps = 6/74 (8%)
Query: 387 KEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGS-----ALEESEVNQYMEAGDIDGNG 441
+ +M F + D LT +L+ + K + V++ M+ D +G
Sbjct: 6 HAMETMMFTFHKFAGDK-GYLTKEDLRVLMEKEFPGFLENQKDPLAVDKIMKDLDQCRDG 64
Query: 442 NIDSIEFVNLMTDI 455
+ F +L+ +
Sbjct: 65 KVGFQSFFSLIAGL 78
|
| >d2jxca1 a.39.1.6 (A:121-215) Eps15 {Human (Homo sapiens) [TaxId: 9606]} Length = 95 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Eps15 homology domain (EH domain) domain: Eps15 species: Human (Homo sapiens) [TaxId: 9606]
Score = 41.9 bits (98), Expect = 1e-05
Identities = 17/74 (22%), Positives = 30/74 (40%), Gaps = 3/74 (4%)
Query: 384 LPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNI 443
+ ++K K F + + L+ ++K L L + + E DID +G +
Sbjct: 4 VKPEDKAKYDAIFDSLS-PVNGFLSGDKVKPVLLNSK--LPVDILGRVWELSDIDHDGML 60
Query: 444 DSIEFVNLMTDIYK 457
D EF M +Y
Sbjct: 61 DRDEFAVAMFLVYC 74
|
| >d1xo5a_ a.39.1.5 (A:) Calcium- and integrin-binding protein, CIB {Human (Homo sapiens) [TaxId: 9606]} Length = 180 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium- and integrin-binding protein, CIB species: Human (Homo sapiens) [TaxId: 9606]
Score = 43.6 bits (102), Expect = 1e-05
Identities = 29/185 (15%), Positives = 62/185 (33%), Gaps = 34/185 (18%)
Query: 305 MNKLKKLTIKVIVEYLPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDV 364
+ + + LT +L +E +F E+ + ++ + L E
Sbjct: 2 LAEYQDLT------FLTKQEILLAHRRFCELLPQEQRSVESSLRAQVPFEQILSLPELKA 55
Query: 365 KHLMEAVKNSSTLESLCENLPTKEKQKLMEK--------------FREMDTDNSDTLTLS 410
E + + ++L ++ L+ FR D D+ TL
Sbjct: 56 NPFKERICRVFSTSPAKDSLSFEDFLDLLSVFSDTATPDIKSHYAFRIFDFDDDGTLNRE 115
Query: 411 ELKAGLAKLGSALE---------ESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIYKLETP 461
+L + L E + ++ +E DID +G I+ EF ++++ +P
Sbjct: 116 DLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINLSEFQHVIS-----RSP 170
Query: 462 ELLEK 466
+
Sbjct: 171 DFASS 175
|
| >d1xo5a_ a.39.1.5 (A:) Calcium- and integrin-binding protein, CIB {Human (Homo sapiens) [TaxId: 9606]} Length = 180 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium- and integrin-binding protein, CIB species: Human (Homo sapiens) [TaxId: 9606]
Score = 38.2 bits (88), Expect = 9e-04
Identities = 12/62 (19%), Positives = 27/62 (43%), Gaps = 1/62 (1%)
Query: 305 MNKLKKLTIKVIVEYLPDEETQALKEKFI-EMDTDKNGTLSYDELRAGLTKVGSMLTEFD 363
+ LT + L E + L + + E D D++GT++ E + +++ + F
Sbjct: 118 SRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINLSEFQHVISRSPDFASSFK 177
Query: 364 VK 365
+
Sbjct: 178 IV 179
|
| >d2zkmx1 a.39.1.7 (X:142-311) Phospholipase C-beta-2 {Human (Homo sapiens) [TaxId: 9606]} Length = 170 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: EF-hand modules in multidomain proteins domain: Phospholipase C-beta-2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 43.1 bits (101), Expect = 1e-05
Identities = 14/141 (9%), Positives = 36/141 (25%), Gaps = 21/141 (14%)
Query: 333 IEMDTDKNGTLSYDELRAGLTKVGS-MLTEFDVKHLMEAVKNSSTLESLCE------NLP 385
++M + G + + HL + ++ E E +
Sbjct: 14 LKMQLNSEGKIPVKNFFQMFPADRKRVEAALSACHLPKGKNDAINPEDFPEPVYKSFLMS 73
Query: 386 TKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESE--------------VNQY 431
+ ++ E F +T L + + + +++Y
Sbjct: 74 LCPRPEIDEIFTSYHAKAKPYMTKEHLTKFINQKQRDSRLNSLLFPPARPDQVQGLIDKY 133
Query: 432 MEAGDIDGNGNIDSIEFVNLM 452
+G G + V +
Sbjct: 134 EPSGINAQRGQLSPEGMVWFL 154
|
| >d2zkmx1 a.39.1.7 (X:142-311) Phospholipase C-beta-2 {Human (Homo sapiens) [TaxId: 9606]} Length = 170 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: EF-hand modules in multidomain proteins domain: Phospholipase C-beta-2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 38.1 bits (88), Expect = 7e-04
Identities = 7/79 (8%), Positives = 22/79 (27%), Gaps = 1/79 (1%)
Query: 399 MDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIYKL 458
M ++ + + +E + ++ G D N + + + L
Sbjct: 16 MQLNSEGKIPVKNFFQMFPADRKRVEAALSACHLPKGKNDAI-NPEDFPEPVYKSFLMSL 74
Query: 459 ETPELLEKAFQYLDKNSDQ 477
+++ F +
Sbjct: 75 CPRPEIDEIFTSYHAKAKP 93
|
| >d1zfsa1 a.39.1.2 (A:1-93) Calcyclin (S100) {Rat (Rattus norvegicus), s100a1 [TaxId: 10116]} Length = 93 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Rat (Rattus norvegicus), s100a1 [TaxId: 10116]
Score = 41.5 bits (97), Expect = 1e-05
Identities = 18/76 (23%), Positives = 32/76 (42%), Gaps = 7/76 (9%)
Query: 387 KEKQKLMEKFREMDT--DNSDTLTLSELKAGLAKLGSA-----LEESEVNQYMEAGDIDG 439
+ L+ F + L+ ELK L S+ + V++ M+ D +G
Sbjct: 6 TAMETLINVFHAHSGKEGDKYKLSKKELKDLLQTELSSFLDVQKDADAVDKIMKELDENG 65
Query: 440 NGNIDSIEFVNLMTDI 455
+G +D EFV L+ +
Sbjct: 66 DGEVDFQEFVVLVAAL 81
|
| >d1ksoa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100a3 [TaxId: 9606]} Length = 93 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100a3 [TaxId: 9606]
Score = 40.6 bits (95), Expect = 3e-05
Identities = 13/58 (22%), Positives = 26/58 (44%), Gaps = 5/58 (8%)
Query: 403 NSDTLTLSELKAGLAKLGSA-----LEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDI 455
+ L +ELK L K + E + N++M D + + +D +E+V + +
Sbjct: 24 DKYKLCQAELKELLQKELATWTPTEFRECDYNKFMSVLDTNKDCEVDFVEYVRSLACL 81
|
| >d1yuta1 a.39.1.2 (A:1-98) Calcyclin (S100) {Human (Homo sapiens), s100a13 [TaxId: 9606]} Length = 98 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100a13 [TaxId: 9606]
Score = 40.6 bits (95), Expect = 3e-05
Identities = 11/87 (12%), Positives = 37/87 (42%), Gaps = 4/87 (4%)
Query: 387 KEKQKLMEKFREMDT--DNSDTLTLSELKAGLAKLG--SALEESEVNQYMEAGDIDGNGN 442
+ + ++ F D+L+++E K + + + +++ M++ D++ +
Sbjct: 11 ESIETVVTTFFTFARQEGRKDSLSVNEFKELVTQQLPHLLKDVGSLDEKMKSLDVNQDSE 70
Query: 443 IDSIEFVNLMTDIYKLETPELLEKAFQ 469
+ E+ L+ ++ K + K +
Sbjct: 71 LKFNEYWRLIGELAKEIRKKKDLKIRK 97
|
| >d1c07a_ a.39.1.6 (A:) Eps15 {Human (Homo sapiens) [TaxId: 9606]} Length = 95 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Eps15 homology domain (EH domain) domain: Eps15 species: Human (Homo sapiens) [TaxId: 9606]
Score = 40.4 bits (94), Expect = 3e-05
Identities = 13/69 (18%), Positives = 24/69 (34%), Gaps = 2/69 (2%)
Query: 384 LPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNI 443
+ EK K E F + D D ++ E++ L + L + + D G +
Sbjct: 4 VSPAEKAKYDEIFLKTDKDMDGFVSGLEVREI--FLKTGLPSTLLAHIWSLCDTKDCGKL 61
Query: 444 DSIEFVNLM 452
+F
Sbjct: 62 SKDQFALAF 70
|
| >d1omra_ a.39.1.5 (A:) Recoverin {Cow (Bos taurus) [TaxId: 9913]} Length = 201 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Recoverin species: Cow (Bos taurus) [TaxId: 9913]
Score = 42.1 bits (98), Expect = 4e-05
Identities = 27/199 (13%), Positives = 64/199 (32%), Gaps = 33/199 (16%)
Query: 304 RMNKLKKLTIKVIVE--YLPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLT- 360
+ L K ++ + +EE + + F + +G ++ E + +K
Sbjct: 4 KSGALSKEILEELQLNTKFTEEELSSWYQSF--LKECPSGRITRQEFQTIYSKFFPEADP 61
Query: 361 EFDVKHLMEAVKNSST--------LESLCENLPTKEKQKLMEKFREMDTDNSDTLTLSEL 412
+ +H+ + +S + +L K QKL F D D + T++ +E+
Sbjct: 62 KAYAQHVFRSFDANSDGTLDFKEYVIALHMTSAGKTNQKLEWAFSLYDVDGNGTISKNEV 121
Query: 413 KAGLAKLGSAL--------------EESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIYKL 458
+ + + E + + + EF+ L
Sbjct: 122 LEIVTAIFKMISPEDTKHLPEDENTPEKRAEKIWGFFGKKDDDKLTEKEFIEGT-----L 176
Query: 459 ETPELLEKAFQYLDKNSDQ 477
E+L + Q+ + +
Sbjct: 177 ANKEIL-RLIQFEPQKVKE 194
|
| >d1omra_ a.39.1.5 (A:) Recoverin {Cow (Bos taurus) [TaxId: 9913]} Length = 201 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Recoverin species: Cow (Bos taurus) [TaxId: 9913]
Score = 39.0 bits (90), Expect = 5e-04
Identities = 33/166 (19%), Positives = 56/166 (33%), Gaps = 20/166 (12%)
Query: 257 KDLVRRMLTKDPKRRITAAQVLEHPWLRESGEASDDTSVILRMKQFRRMNKLKKLTIKVI 316
+ L + P RIT + + +D + + + N L K
Sbjct: 28 SSWYQSFLKECPSGRITRQEF--QTIYSKFFPEADPKAYAQHVFRSFDANSDGTLDFKEY 85
Query: 317 VEYL----PDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVK 372
V L + Q L+ F D D NGT+S +E+ +T + M++ D KHL E
Sbjct: 86 VIALHMTSAGKTNQKLEWAFSLYDVDGNGTISKNEVLEIVTAIFKMISPEDTKHLPEDEN 145
Query: 373 NSSTLESLCENLPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAK 418
+++ + + + D LT E G
Sbjct: 146 TP--------------EKRAEKIWGFFGKKDDDKLTEKEFIEGTLA 177
|
| >d1fi6a_ a.39.1.6 (A:) Reps1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 92 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Eps15 homology domain (EH domain) domain: Reps1 species: Mouse (Mus musculus) [TaxId: 10090]
Score = 39.6 bits (92), Expect = 6e-05
Identities = 15/69 (21%), Positives = 29/69 (42%), Gaps = 2/69 (2%)
Query: 384 LPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNI 443
+ +++Q + +F+ + D + + S K K S L E++ E D D +G +
Sbjct: 3 ITDEQRQYYVNQFKTIQPDLNGFIPGSAAKEFFTK--SKLPILELSHIWELSDFDKDGAL 60
Query: 444 DSIEFVNLM 452
EF
Sbjct: 61 TLDEFCAAF 69
|
| >d1xk4a1 a.39.1.2 (A:1-87) Calcyclin (S100) {Human (Homo sapiens), calgranulin s100a8, MRP8 [TaxId: 9606]} Length = 87 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), calgranulin s100a8, MRP8 [TaxId: 9606]
Score = 39.4 bits (92), Expect = 7e-05
Identities = 11/72 (15%), Positives = 30/72 (41%), Gaps = 3/72 (4%)
Query: 387 KEKQKLMEKFRE-MDTD-NSDTLTLSELKAGLAKL-GSALEESEVNQYMEAGDIDGNGNI 443
K +++ + + N + +LK L + + + + + DI+ +G +
Sbjct: 7 KALNSIIDVYHKYSLIKGNFHAVYRDDLKKLLETESPQYIRKKGADVWFKELDINTDGAV 66
Query: 444 DSIEFVNLMTDI 455
+ EF+ L+ +
Sbjct: 67 NFQEFLILVIKM 78
|
| >d1e8aa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), calgranulin C, s100a12 [TaxId: 9606]} Length = 87 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), calgranulin C, s100a12 [TaxId: 9606]
Score = 39.0 bits (91), Expect = 9e-05
Identities = 13/59 (22%), Positives = 29/59 (49%), Gaps = 5/59 (8%)
Query: 402 DNSDTLTLSELKAGLAKLGSA-----LEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDI 455
+ DTL+ ELK L K + +++ +++ + D + + +D EF++L+
Sbjct: 22 GHFDTLSKGELKQLLTKELANTIKNIKDKAVIDEIFQGLDANQDEQVDFQEFISLVAIA 80
|
| >d1psra_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), psoriasin s100a7 [TaxId: 9606]} Length = 100 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), psoriasin s100a7 [TaxId: 9606]
Score = 38.4 bits (89), Expect = 2e-04
Identities = 12/76 (15%), Positives = 27/76 (35%), Gaps = 8/76 (10%)
Query: 387 KEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGS-------ALEESEVNQYMEAGDIDG 439
+ +++ F + D + L + + + + E D +
Sbjct: 7 RSIIGMIDMFHKYT-RRDDKIDKPSLLTMMKENFPNFLSACDKKGTNYLADVFEKKDKNE 65
Query: 440 NGNIDSIEFVNLMTDI 455
+ ID EF++L+ DI
Sbjct: 66 DKKIDFSEFLSLLGDI 81
|
| >d1k8ua_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100a6 [TaxId: 9606]} Length = 89 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100a6 [TaxId: 9606]
Score = 37.1 bits (86), Expect = 4e-04
Identities = 17/71 (23%), Positives = 32/71 (45%), Gaps = 5/71 (7%)
Query: 390 QKLMEKFREMDTDNSDTLTLS-----ELKAGLAKLGSALEESEVNQYMEAGDIDGNGNID 444
L+ F + D TLS EL +GS L+++E+ + ME D + + ++
Sbjct: 9 GLLVAIFHKYSGREGDKHTLSKKELKELIQKELTIGSKLQDAEIARLMEDLDRNKDQEVN 68
Query: 445 SIEFVNLMTDI 455
E+V + +
Sbjct: 69 FQEYVTFLGAL 79
|
| >d1iq3a_ a.39.1.6 (A:) Pob1 {Human (Homo sapiens) [TaxId: 9606]} Length = 110 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Eps15 homology domain (EH domain) domain: Pob1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 37.4 bits (86), Expect = 5e-04
Identities = 15/69 (21%), Positives = 29/69 (42%), Gaps = 2/69 (2%)
Query: 384 LPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNI 443
+ ++++ + +FR + D S ++ S K S L E++ E D D +G +
Sbjct: 16 ITEEQREYYVNQFRSLQPDPSSFISGSVAKN--FFTKSKLSIPELSYIWELSDADCDGAL 73
Query: 444 DSIEFVNLM 452
EF
Sbjct: 74 TLPEFCAAF 82
|
| >d1qlsa_ a.39.1.2 (A:) Calcyclin (S100) {Pig (Sus scrofa), calgizzarin s100c (s100a11) [TaxId: 9823]} Length = 95 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Pig (Sus scrofa), calgizzarin s100c (s100a11) [TaxId: 9823]
Score = 35.5 bits (82), Expect = 0.002
Identities = 11/58 (18%), Positives = 28/58 (48%), Gaps = 5/58 (8%)
Query: 403 NSDTLTLSELKAGLAK-----LGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDI 455
N+ ++ +E + + + +++ M+ D+D +G +D EF+NL+ +
Sbjct: 24 NNTKISKTEFLIFMNTELAAFTQNQKDPGVLDRMMKKLDLDSDGQLDFQEFLNLIGGL 81
|
| >d1j55a_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100p [TaxId: 9606]} Length = 94 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100p [TaxId: 9606]
Score = 35.1 bits (81), Expect = 0.003
Identities = 16/59 (27%), Positives = 30/59 (50%), Gaps = 5/59 (8%)
Query: 402 DNSDTLTLSELKAGLAK-----LGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDI 455
++ TLT ELK + K L S ++ V++ ++ D +G+ +D EF+ + I
Sbjct: 23 GSTQTLTKGELKVLMEKELPGFLQSGKDKDAVDKLLKDLDANGDAQVDFSEFIVFVAAI 81
|
| >d1qjta_ a.39.1.6 (A:) Eps15 {Mouse (Mus musculus) [TaxId: 10090]} Length = 99 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Eps15 homology domain (EH domain) domain: Eps15 species: Mouse (Mus musculus) [TaxId: 10090]
Score = 35.0 bits (80), Expect = 0.003
Identities = 12/67 (17%), Positives = 26/67 (38%), Gaps = 2/67 (2%)
Query: 386 TKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDS 445
+ + +R+++ N+ + + A L K G + + + D DG G +
Sbjct: 7 SSGNPVYEKYYRQVEAGNTGRVLALDAAAFLKKSGLPDLI--LGKIWDLADTDGKGVLSK 64
Query: 446 IEFVNLM 452
EF +
Sbjct: 65 QEFFVAL 71
|
| >d3cr5x1 a.39.1.2 (X:0-89) Calcyclin (S100) {Cow (Bos taurus), s100b [TaxId: 9913]} Length = 90 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Cow (Bos taurus), s100b [TaxId: 9913]
Score = 34.3 bits (79), Expect = 0.004
Identities = 18/59 (30%), Positives = 26/59 (44%), Gaps = 5/59 (8%)
Query: 402 DNSDTLTLSELKAGLAK-----LGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDI 455
+ L SELK + L E+ V++ ME D DG+G D EF+ + I
Sbjct: 23 GDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSDGDGECDFQEFMAFVAMI 81
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 477 | |||
| d1a06a_ | 307 | Calmodulin-dependent protein kinase {Rat (Rattus n | 100.0 | |
| d2j4za1 | 263 | Aurora-related kinase 1 (aurora-2) {Human (Homo sa | 100.0 | |
| d1yhwa1 | 293 | pak1 {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1nvra_ | 271 | Cell cycle checkpoint kinase chk1 {Human (Homo sap | 100.0 | |
| d1jksa_ | 293 | Death-associated protein kinase, Dap {Human (Homo | 100.0 | |
| d1phka_ | 277 | gamma-subunit of glycogen phosphorylase kinase (Ph | 100.0 | |
| d1u5ra_ | 309 | Serine/threonine protein kinase TAO2 {Rat (Rattus | 100.0 | |
| d1koaa2 | 350 | Twitchin, kinase domain {Caenorhabditis elegans, p | 100.0 | |
| d1uu3a_ | 288 | 3-phosphoinositide dependent protein kinase-1 Pdk1 | 100.0 | |
| d1koba_ | 352 | Twitchin, kinase domain {California sea hare (Aply | 100.0 | |
| d2jfla1 | 288 | STE20-like serine/threonine-protein kinase, SLK {H | 100.0 | |
| d1o6la_ | 337 | Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9 | 100.0 | |
| d1t4ha_ | 270 | Protein kinase wnk1 {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1tkia_ | 321 | Titin, kinase domain {Human (Homo sapiens) [TaxId: | 100.0 | |
| d2java1 | 269 | Serine/threonine-protein kinase Nek2 {Human (Homo | 100.0 | |
| d1fota_ | 316 | cAMP-dependent PK, catalytic subunit {Baker's yeas | 100.0 | |
| d1s9ja_ | 322 | Dual specificity mitogen-activated protein kinase | 100.0 | |
| d2ozaa1 | 335 | MAP kinase activated protein kinase 2, mapkap2 {Hu | 100.0 | |
| d1xjda_ | 320 | Protein kinase C, theta type {Human (Homo sapiens) | 100.0 | |
| d1rdqe_ | 350 | cAMP-dependent PK, catalytic subunit {Mouse (Mus m | 100.0 | |
| d1omwa3 | 364 | G-protein coupled receptor kinase 2 {Cow (Bos taur | 100.0 | |
| d1ua2a_ | 299 | Cell division protein kinase 7, CDK7 {Human (Homo | 100.0 | |
| d1xwsa_ | 273 | Proto-oncogene serine/threonine-protein kinase Pim | 100.0 | |
| d1o6ya_ | 277 | Mycobacterial protein kinase PknB, catalytic domai | 100.0 | |
| d1gz8a_ | 298 | Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T | 100.0 | |
| d1blxa_ | 305 | Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T | 100.0 | |
| d1ob3a_ | 286 | Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) | 100.0 | |
| d1opja_ | 287 | Abelsone tyrosine kinase (abl) {Mouse (Mus musculu | 100.0 | |
| d1rjba_ | 325 | Fl cytokine receptor {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1uwha_ | 276 | B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1qpca_ | 272 | Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax | 100.0 | |
| d1q5ka_ | 350 | Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho | 100.0 | |
| d1cm8a_ | 346 | MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1vzoa_ | 322 | Ribosomal protein S6 kinase alpha 5, Msk1 {Human ( | 100.0 | |
| d1sm2a_ | 263 | Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie | 100.0 | |
| d1jpaa_ | 299 | ephb2 receptor tyrosine kinase {Mouse (Mus musculu | 100.0 | |
| d1k2pa_ | 258 | Bruton's tyrosine kinase (Btk) {Human (Homo sapien | 100.0 | |
| d1xbba_ | 277 | Tyrosine-protein kinase SYK {Human (Homo sapiens) | 100.0 | |
| d3blha1 | 318 | Cell division protein kinase 9, CDK9 {Human (Homo | 100.0 | |
| d1u59a_ | 285 | Tyrosine-protein kinase ZAP-70 {Human (Homo sapien | 100.0 | |
| d3bqca1 | 328 | Protein kinase CK2, alpha subunit {Rattus norvegic | 100.0 | |
| d1unla_ | 292 | Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T | 100.0 | |
| d1pmea_ | 345 | MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606 | 100.0 | |
| d1fmka3 | 285 | c-src tyrosine kinase {Human (Homo sapiens) [TaxId | 100.0 | |
| d1mp8a_ | 273 | Focal adhesion kinase 1 (fak) {Human (Homo sapiens | 100.0 | |
| d2gfsa1 | 348 | MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606] | 100.0 | |
| d2b1pa1 | 355 | c-jun N-terminal kinase (jnk3s) {Human (Homo sapie | 100.0 | |
| d1ywna1 | 299 | Vascular endothelial growth factor receptor 2 (kdr | 100.0 | |
| d1fvra_ | 309 | Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1mqba_ | 283 | epha2 receptor tyrosine kinase {Human (Homo sapien | 100.0 | |
| d1u46a_ | 273 | Activated CDC42 kinase 1, ACK1 {Human (Homo sapien | 100.0 | |
| d1fgka_ | 299 | Fibroblast growth factor receptor 1 {Human (Homo s | 100.0 | |
| d1byga_ | 262 | Carboxyl-terminal src kinase (csk) {Human (Homo sa | 100.0 | |
| d1xkka_ | 317 | EGF receptor tyrosine kinase, Erbb-1 {Human (Homo | 100.0 | |
| d1lufa_ | 301 | Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax | 100.0 | |
| d1t46a_ | 311 | c-KIT receptor {Human (Homo sapiens) [TaxId: 9606] | 100.0 | |
| d1p4oa_ | 308 | Insulin-like growth factor 1 receptor {Human (Homo | 100.0 | |
| d1ckia_ | 299 | Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax | 100.0 | |
| d1r0pa_ | 311 | Hepatocyte growth factor receptor, c-MET {Human (H | 100.0 | |
| d1csna_ | 293 | Casein kinase-1, CK1 {Fission yeast (Schizosacchar | 100.0 | |
| d1vjya_ | 303 | Type I TGF-beta receptor R4 {Human (Homo sapiens) | 100.0 | |
| d1q8ya_ | 362 | Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T | 100.0 | |
| d1zara2 | 191 | Rio2 serine protein kinase C-terminal domain {Arch | 99.94 | |
| d1wdcb_ | 142 | Myosin Essential Chain {Bay scallop (Aequipecten i | 99.85 | |
| d1y1xa_ | 182 | Programmed cell death 6 protein-like protein {Leis | 99.85 | |
| d1lkja_ | 146 | Calmodulin {Baker's yeast (Saccharomyces cerevisia | 99.82 | |
| d1ggwa_ | 140 | Cdc4p {Fission yeast (Schizosaccharomyces pombe) [ | 99.82 | |
| d1hqva_ | 181 | Apoptosis-linked protein alg-2 {Mouse (Mus musculu | 99.81 | |
| d1exra_ | 146 | Calmodulin {Ciliate (Paramecium tetraurelia) [TaxI | 99.81 | |
| d1k94a_ | 165 | Grancalcin {Human (Homo sapiens) [TaxId: 9606]} | 99.81 | |
| d1dtla_ | 156 | Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | 99.81 | |
| d2mysc_ | 145 | Myosin Regulatory Chain {Chicken (Gallus gallus) [ | 99.8 | |
| d2obha1 | 141 | Calmodulin {Human (Homo sapiens) [TaxId: 9606]} | 99.8 | |
| d2mysb_ | 145 | Myosin Essential Chain {Chicken (Gallus gallus) [T | 99.79 | |
| d1alva_ | 173 | Calpain small (regulatory) subunit (domain VI) {Pi | 99.79 | |
| d1df0a1 | 186 | Calpain large subunit, C-terminal domain (domain I | 99.78 | |
| d1topa_ | 162 | Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | 99.78 | |
| d1wdcc_ | 152 | Myosin Regulatory Chain {Bay scallop (Aequipecten | 99.77 | |
| d1juoa_ | 172 | Sorcin {Human (Homo sapiens) [TaxId: 9606]} | 99.77 | |
| d1m45a_ | 146 | Myosin Light Chain Mlc1p {Baker's yeast (Saccharom | 99.77 | |
| d1qxpa2 | 188 | Calpain large subunit, C-terminal domain (domain I | 99.76 | |
| d1w7jb1 | 139 | Myosin Essential Chain {Human (Homo sapiens) [TaxI | 99.72 | |
| d1jfja_ | 134 | EHCABP {Entamoeba (Entamoeba histolytica) [TaxId: | 99.68 | |
| d1s6ia_ | 182 | Calcium-dependent protein kinase sk5 CLD {Soybean | 99.68 | |
| d1wrka1 | 82 | Troponin C {Human (Homo sapiens), cardiac isoform | 99.67 | |
| d1avsa_ | 81 | Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | 99.65 | |
| d1f54a_ | 77 | Calmodulin {Baker's yeast (Saccharomyces cerevisia | 99.64 | |
| d2opoa1 | 81 | Polcalcin Che a 3 {Pigweed (Chenopodium album) [Ta | 99.64 | |
| d1qv0a_ | 189 | Calcium-regulated photoprotein {Hydrozoa (Obelia l | 99.64 | |
| d1uhka1 | 187 | Calcium-regulated photoprotein {Jellyfish (Aequore | 99.63 | |
| d2pq3a1 | 73 | Calmodulin {Rattus norvegicus [TaxId: 10116]} | 99.63 | |
| d5pala_ | 109 | Parvalbumin {Leopard shark (Triakis semifasciata) | 99.63 | |
| d1pvaa_ | 109 | Parvalbumin {Pike (Esox lucius) [TaxId: 8010]} | 99.61 | |
| d1wdcb_ | 142 | Myosin Essential Chain {Bay scallop (Aequipecten i | 99.61 | |
| d1jc2a_ | 75 | Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | 99.58 | |
| d1fw4a_ | 65 | Calmodulin {Cow (Bos taurus) [TaxId: 9913]} | 99.58 | |
| d1auib_ | 165 | Calcineurin regulatory subunit (B-chain) {Human (H | 99.58 | |
| d1g8ia_ | 187 | Frequenin (neuronal calcium sensor 1) {Human (Homo | 99.55 | |
| d1wdcc_ | 152 | Myosin Regulatory Chain {Bay scallop (Aequipecten | 99.55 | |
| d1exra_ | 146 | Calmodulin {Ciliate (Paramecium tetraurelia) [TaxI | 99.55 | |
| d1jbaa_ | 189 | Guanylate cyclase activating protein 2, GCAP-2 {Co | 99.54 | |
| d1oqpa_ | 77 | Caltractin (centrin 2) {Green algae (Chlamydomonas | 99.54 | |
| d1ij5a_ | 321 | Cbp40 (plasmodial specific CaII-binding protein LA | 99.54 | |
| d2fcea1 | 61 | Calmodulin {Cow (Bos taurus) [TaxId: 9913]} | 99.54 | |
| d1fi5a_ | 81 | Troponin C {Chicken (Gallus gallus), cardiac isofo | 99.54 | |
| d1tiza_ | 67 | Calmodulin-related protein T21P5.17 {Thale cress ( | 99.54 | |
| d1s6ja_ | 87 | Calcium-dependent protein kinase sk5 CLD {Soybean | 99.53 | |
| d1c7va_ | 68 | Calcium vector protein {Amphioxus (Branchiostoma l | 99.53 | |
| d2pvba_ | 107 | Parvalbumin {Pike (Esox lucius) [TaxId: 8010]} | 99.53 | |
| d1nyaa_ | 176 | Calerythrin {Saccharopolyspora erythraea [TaxId: 1 | 99.52 | |
| d2mysc_ | 145 | Myosin Regulatory Chain {Chicken (Gallus gallus) [ | 99.52 | |
| d1fpwa_ | 190 | Frequenin (neuronal calcium sensor 1) {Baker's yea | 99.52 | |
| d1rroa_ | 108 | Oncomodulin {Rat (Rattus norvegicus) [TaxId: 10116 | 99.51 | |
| d2scpa_ | 174 | Sarcoplasmic calcium-binding protein {Sandworm (Ne | 99.51 | |
| d2zfda1 | 183 | Calcineurin B-like protein 2 {Thale cress (Arabido | 99.51 | |
| d1rwya_ | 109 | Parvalbumin {Rat (Rattus rattus) [TaxId: 10117]} | 99.5 | |
| d2sasa_ | 185 | Sarcoplasmic calcium-binding protein {Amphioxus (B | 99.5 | |
| d1bjfa_ | 181 | Neurocalcin {Cow (Bos taurus) [TaxId: 9913]} | 99.49 | |
| d1lkja_ | 146 | Calmodulin {Baker's yeast (Saccharomyces cerevisia | 99.49 | |
| d1ggwa_ | 140 | Cdc4p {Fission yeast (Schizosaccharomyces pombe) [ | 99.47 | |
| d1dtla_ | 156 | Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | 99.46 | |
| d1topa_ | 162 | Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | 99.44 | |
| d1omra_ | 201 | Recoverin {Cow (Bos taurus) [TaxId: 9913]} | 99.44 | |
| d1s6ca_ | 178 | Kchip1, Kv4 potassium channel-interacting protein | 99.44 | |
| d2obha1 | 141 | Calmodulin {Human (Homo sapiens) [TaxId: 9606]} | 99.43 | |
| d1xo5a_ | 180 | Calcium- and integrin-binding protein, CIB {Human | 99.43 | |
| d1jfja_ | 134 | EHCABP {Entamoeba (Entamoeba histolytica) [TaxId: | 99.42 | |
| d2mysb_ | 145 | Myosin Essential Chain {Chicken (Gallus gallus) [T | 99.42 | |
| d1s6ia_ | 182 | Calcium-dependent protein kinase sk5 CLD {Soybean | 99.41 | |
| d1qx2a_ | 76 | Calbindin D9K {Cow (Bos taurus) [TaxId: 9913]} | 99.39 | |
| d1w7jb1 | 139 | Myosin Essential Chain {Human (Homo sapiens) [TaxI | 99.37 | |
| d1auib_ | 165 | Calcineurin regulatory subunit (B-chain) {Human (H | 99.35 | |
| d1jbaa_ | 189 | Guanylate cyclase activating protein 2, GCAP-2 {Co | 99.35 | |
| d1wlza1 | 83 | DJ-1-binding protein, DJBP {Human (Homo sapiens) [ | 99.33 | |
| d1m45a_ | 146 | Myosin Light Chain Mlc1p {Baker's yeast (Saccharom | 99.32 | |
| d1y1xa_ | 182 | Programmed cell death 6 protein-like protein {Leis | 99.31 | |
| d1hqva_ | 181 | Apoptosis-linked protein alg-2 {Mouse (Mus musculu | 99.27 | |
| d1omra_ | 201 | Recoverin {Cow (Bos taurus) [TaxId: 9913]} | 99.26 | |
| d1cb1a_ | 78 | Calbindin D9K {Pig (Sus scrofa) [TaxId: 9823]} | 99.25 | |
| d1c07a_ | 95 | Eps15 {Human (Homo sapiens) [TaxId: 9606]} | 99.24 | |
| d1fi6a_ | 92 | Reps1 {Mouse (Mus musculus) [TaxId: 10090]} | 99.24 | |
| d1k94a_ | 165 | Grancalcin {Human (Homo sapiens) [TaxId: 9606]} | 99.22 | |
| d1zfsa1 | 93 | Calcyclin (S100) {Rat (Rattus norvegicus), s100a1 | 99.21 | |
| d2zfda1 | 183 | Calcineurin B-like protein 2 {Thale cress (Arabido | 99.21 | |
| d1yuta1 | 98 | Calcyclin (S100) {Human (Homo sapiens), s100a13 [T | 99.19 | |
| d1alva_ | 173 | Calpain small (regulatory) subunit (domain VI) {Pi | 99.19 | |
| d1juoa_ | 172 | Sorcin {Human (Homo sapiens) [TaxId: 9606]} | 99.19 | |
| d3c1va1 | 93 | Calcyclin (S100) {Human (Homo sapiens), s100a4 [Ta | 99.19 | |
| d1a4pa_ | 92 | Calcyclin (S100) {Human (Homo sapiens), P11 s100a1 | 99.19 | |
| d1fpwa_ | 190 | Frequenin (neuronal calcium sensor 1) {Baker's yea | 99.17 | |
| d1ksoa_ | 93 | Calcyclin (S100) {Human (Homo sapiens), s100a3 [Ta | 99.17 | |
| d1df0a1 | 186 | Calpain large subunit, C-terminal domain (domain I | 99.16 | |
| d1bjfa_ | 181 | Neurocalcin {Cow (Bos taurus) [TaxId: 9913]} | 99.16 | |
| d1k8ua_ | 89 | Calcyclin (S100) {Human (Homo sapiens), s100a6 [Ta | 99.14 | |
| d1qxpa2 | 188 | Calpain large subunit, C-terminal domain (domain I | 99.12 | |
| d1xk4a1 | 87 | Calcyclin (S100) {Human (Homo sapiens), calgranuli | 99.11 | |
| d1g8ia_ | 187 | Frequenin (neuronal calcium sensor 1) {Human (Homo | 99.1 | |
| d1s6ca_ | 178 | Kchip1, Kv4 potassium channel-interacting protein | 99.09 | |
| d2jxca1 | 95 | Eps15 {Human (Homo sapiens) [TaxId: 9606]} | 99.09 | |
| d1snla_ | 99 | Nucleobindin 1 (CALNUC) {Human (Homo sapiens) [Tax | 99.04 | |
| d1wrka1 | 82 | Troponin C {Human (Homo sapiens), cardiac isoform | 99.03 | |
| d1e8aa_ | 87 | Calcyclin (S100) {Human (Homo sapiens), calgranuli | 99.03 | |
| d2opoa1 | 81 | Polcalcin Che a 3 {Pigweed (Chenopodium album) [Ta | 99.0 | |
| d1f54a_ | 77 | Calmodulin {Baker's yeast (Saccharomyces cerevisia | 98.99 | |
| d1avsa_ | 81 | Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | 98.99 | |
| d1iq3a_ | 110 | Pob1 {Human (Homo sapiens) [TaxId: 9606]} | 98.98 | |
| d2pq3a1 | 73 | Calmodulin {Rattus norvegicus [TaxId: 10116]} | 98.97 | |
| d1tiza_ | 67 | Calmodulin-related protein T21P5.17 {Thale cress ( | 98.97 | |
| d1qv0a_ | 189 | Calcium-regulated photoprotein {Hydrozoa (Obelia l | 98.97 | |
| d1psra_ | 100 | Calcyclin (S100) {Human (Homo sapiens), psoriasin | 98.97 | |
| d1uhka1 | 187 | Calcium-regulated photoprotein {Jellyfish (Aequore | 98.96 | |
| d1ij5a_ | 321 | Cbp40 (plasmodial specific CaII-binding protein LA | 98.95 | |
| d1xo5a_ | 180 | Calcium- and integrin-binding protein, CIB {Human | 98.94 | |
| d2zkmx1 | 170 | Phospholipase C-beta-2 {Human (Homo sapiens) [TaxI | 98.93 | |
| d1fi5a_ | 81 | Troponin C {Chicken (Gallus gallus), cardiac isofo | 98.91 | |
| d1jc2a_ | 75 | Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | 98.89 | |
| d1s6ja_ | 87 | Calcium-dependent protein kinase sk5 CLD {Soybean | 98.89 | |
| d1fw4a_ | 65 | Calmodulin {Cow (Bos taurus) [TaxId: 9913]} | 98.89 | |
| d1qjta_ | 99 | Eps15 {Mouse (Mus musculus) [TaxId: 10090]} | 98.88 | |
| d2hf5a1 | 33 | Troponin C {Human (Homo sapiens), cardiac isoform | 98.88 | |
| d1oqpa_ | 77 | Caltractin (centrin 2) {Green algae (Chlamydomonas | 98.87 | |
| d2sasa_ | 185 | Sarcoplasmic calcium-binding protein {Amphioxus (B | 98.85 | |
| d2scpa_ | 174 | Sarcoplasmic calcium-binding protein {Sandworm (Ne | 98.84 | |
| d2fcea1 | 61 | Calmodulin {Cow (Bos taurus) [TaxId: 9913]} | 98.8 | |
| d1pvaa_ | 109 | Parvalbumin {Pike (Esox lucius) [TaxId: 8010]} | 98.78 | |
| d5pala_ | 109 | Parvalbumin {Leopard shark (Triakis semifasciata) | 98.78 | |
| d1c7va_ | 68 | Calcium vector protein {Amphioxus (Branchiostoma l | 98.7 | |
| d1rwya_ | 109 | Parvalbumin {Rat (Rattus rattus) [TaxId: 10117]} | 98.69 | |
| d3cr5x1 | 90 | Calcyclin (S100) {Cow (Bos taurus), s100b [TaxId: | 98.67 | |
| d1j7la_ | 263 | Type IIIa 3',5"-aminoglycoside phosphotransferase | 98.66 | |
| d1nyaa_ | 176 | Calerythrin {Saccharopolyspora erythraea [TaxId: 1 | 98.64 | |
| d1c07a_ | 95 | Eps15 {Human (Homo sapiens) [TaxId: 9606]} | 98.59 | |
| d1wlza1 | 83 | DJ-1-binding protein, DJBP {Human (Homo sapiens) [ | 98.58 | |
| d2pvba_ | 107 | Parvalbumin {Pike (Esox lucius) [TaxId: 8010]} | 98.57 | |
| d1fi6a_ | 92 | Reps1 {Mouse (Mus musculus) [TaxId: 10090]} | 98.54 | |
| d1rroa_ | 108 | Oncomodulin {Rat (Rattus norvegicus) [TaxId: 10116 | 98.51 | |
| d1qlsa_ | 95 | Calcyclin (S100) {Pig (Sus scrofa), calgizzarin s1 | 98.5 | |
| d2zkmx1 | 170 | Phospholipase C-beta-2 {Human (Homo sapiens) [TaxI | 98.48 | |
| d1ctda_ | 34 | Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | 98.47 | |
| d1snla_ | 99 | Nucleobindin 1 (CALNUC) {Human (Homo sapiens) [Tax | 98.44 | |
| d1qx2a_ | 76 | Calbindin D9K {Cow (Bos taurus) [TaxId: 9913]} | 98.43 | |
| d1j55a_ | 94 | Calcyclin (S100) {Human (Homo sapiens), s100p [Tax | 98.38 | |
| d2jxca1 | 95 | Eps15 {Human (Homo sapiens) [TaxId: 9606]} | 98.37 | |
| d1iq3a_ | 110 | Pob1 {Human (Homo sapiens) [TaxId: 9606]} | 98.22 | |
| d1zfsa1 | 93 | Calcyclin (S100) {Rat (Rattus norvegicus), s100a1 | 98.21 | |
| d2pula1 | 392 | Methylthioribose kinase MtnK {Bacillus subtilis [T | 98.2 | |
| d1xk4c1 | 83 | Calcyclin (S100) {Human (Homo sapiens), s100a9 (mr | 98.17 | |
| d1a4pa_ | 92 | Calcyclin (S100) {Human (Homo sapiens), P11 s100a1 | 98.17 | |
| d1qjta_ | 99 | Eps15 {Mouse (Mus musculus) [TaxId: 10090]} | 98.11 | |
| d3c1va1 | 93 | Calcyclin (S100) {Human (Homo sapiens), s100a4 [Ta | 98.03 | |
| d1nd4a_ | 255 | Aminoglycoside 3'-phosphotransferase IIa (Kanamyci | 98.03 | |
| d1cb1a_ | 78 | Calbindin D9K {Pig (Sus scrofa) [TaxId: 9823]} | 98.02 | |
| d2hf5a1 | 33 | Troponin C {Human (Homo sapiens), cardiac isoform | 97.99 | |
| d1ksoa_ | 93 | Calcyclin (S100) {Human (Homo sapiens), s100a3 [Ta | 97.96 | |
| d1psra_ | 100 | Calcyclin (S100) {Human (Homo sapiens), psoriasin | 97.96 | |
| d1yuta1 | 98 | Calcyclin (S100) {Human (Homo sapiens), s100a13 [T | 97.89 | |
| d1k8ua_ | 89 | Calcyclin (S100) {Human (Homo sapiens), s100a6 [Ta | 97.7 | |
| d1tuza_ | 118 | Diacylglycerol kinase alpha, N-terminal domain {Hu | 97.67 | |
| d1ctda_ | 34 | Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | 97.55 | |
| d1xk4a1 | 87 | Calcyclin (S100) {Human (Homo sapiens), calgranuli | 97.51 | |
| d1j7qa_ | 86 | Calcium vector protein {Amphioxus (Branchiostoma l | 97.47 | |
| d1e8aa_ | 87 | Calcyclin (S100) {Human (Homo sapiens), calgranuli | 97.45 | |
| d1nw1a_ | 395 | Choline kinase {Caenorhabditis elegans [TaxId: 623 | 97.16 | |
| d1tuza_ | 118 | Diacylglycerol kinase alpha, N-terminal domain {Hu | 96.98 | |
| d1sraa_ | 151 | C-terminal (EC) domain of BM-40/SPARC/osteonectin | 96.83 | |
| d1zyla1 | 325 | RdoA {Escherichia coli [TaxId: 562]} | 96.62 | |
| d2ppqa1 | 316 | Homoserine kinase ThrB {Agrobacterium tumefaciens | 96.05 | |
| d3cr5x1 | 90 | Calcyclin (S100) {Cow (Bos taurus), s100b [TaxId: | 96.04 | |
| d1qlsa_ | 95 | Calcyclin (S100) {Pig (Sus scrofa), calgizzarin s1 | 95.43 | |
| d1j55a_ | 94 | Calcyclin (S100) {Human (Homo sapiens), s100p [Tax | 95.43 | |
| d1xk4c1 | 83 | Calcyclin (S100) {Human (Homo sapiens), s100a9 (mr | 95.13 | |
| d1qasa1 | 94 | Phosphoinositide-specific phospholipase C, isozyme | 94.8 | |
| d1h8ba_ | 73 | alpha-Actinin {Human (Homo sapiens) [TaxId: 9606]} | 93.31 | |
| d1sraa_ | 151 | C-terminal (EC) domain of BM-40/SPARC/osteonectin | 91.89 | |
| d1pula1 | 103 | Hypothetical protein c32e8.3 {Caenorhabditis elega | 91.47 | |
| d1j7qa_ | 86 | Calcium vector protein {Amphioxus (Branchiostoma l | 88.15 | |
| d1dava_ | 71 | Cellulosome endoglucanase SS {Clostridium thermoce | 85.21 | |
| d1wlma1 | 138 | Protein cgi-38 {Mouse (Mus musculus) [TaxId: 10090 | 84.79 | |
| d2cclb1 | 59 | Endo-1,4-beta-xylanase Y {Clostridium thermocellum | 84.71 | |
| d1eg3a2 | 97 | Dystrophin {Human (Homo sapiens) [TaxId: 9606]} | 83.68 |
| >d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Calmodulin-dependent protein kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=2.9e-65 Score=485.43 Aligned_cols=268 Identities=38% Similarity=0.722 Sum_probs=227.4
Q ss_pred ccccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeC
Q 042823 17 AYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDE 96 (477)
Q Consensus 17 ~~~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~ 96 (477)
..+++.++|++++.||+|+||+||+|.++.+++.||+|++.+.... .....+.+|+.++.++ +|||||++++++.++
T Consensus 3 ~~edi~d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~--~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~ 79 (307)
T d1a06a_ 3 QAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALE--GKEGSMENEIAVLHKI-KHPNIVALDDIYESG 79 (307)
T ss_dssp ECSCGGGTEEEEEESBSGGGGGEEEEEETTTCCEEEEEEEEC------------CHHHHHHHTC-CCTTBCCEEEEEECS
T ss_pred CCCCCccceEEEEEEeeccCeEEEEEEECCCCCEEEEEEEchHHhh--hHHHHHHHHHHHHHhC-CCCCCCcEEEEEEEC
Confidence 4577899999999999999999999999999999999999765432 2235678999999999 799999999999999
Q ss_pred CeEEEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccc
Q 042823 97 TAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALL 176 (477)
Q Consensus 97 ~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~ 176 (477)
+.+|||||||+||+|.+++...+.+++.++..++.||+.||.|||++||+||||||+||++...+.++.+||+|||+|..
T Consensus 80 ~~~~lvmE~~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~ylH~~~iiHrDiKp~Nil~~~~~~~~~vkl~DFG~a~~ 159 (307)
T d1a06a_ 80 GHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM 159 (307)
T ss_dssp SEEEEEECCCCSCBHHHHHHTCSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSTTCCEEECCC-----
T ss_pred CEEEEEEeccCCCcHHHhhhcccCCCHHHHHHHHHHHHHHHHhhhhceeeeEEecccceeecccCCCceEEEeccceeEE
Confidence 99999999999999999999999999999999999999999999999999999999999997666788999999999988
Q ss_pred cCCCcceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCCCCHH
Q 042823 177 FEEGQVYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISST 255 (477)
Q Consensus 177 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 255 (477)
..........+||+.|+|||++.+ .|+.++|||||||++|+|++|.+||.+.........+.++...++.+.++.+|++
T Consensus 160 ~~~~~~~~~~~GT~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~ 239 (307)
T d1a06a_ 160 EDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDS 239 (307)
T ss_dssp -------------CTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHTTCCCCCTTTTTTSCHH
T ss_pred ccCCCeeeeeeeCccccCcHHHcCCCCCcHHHhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHhccCCCCCCccccCCCHH
Confidence 776666667889999999999975 5899999999999999999999999999988999999999888888788899999
Q ss_pred HHHHHHHhcccCccccCCHHHHhcCcccCcCC
Q 042823 256 AKDLVRRMLTKDPKRRITAAQVLEHPWLRESG 287 (477)
Q Consensus 256 ~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~~ 287 (477)
+++||.+||++||++|||+.|+|+||||+...
T Consensus 240 ~~~li~~~L~~dP~~R~s~~eil~hp~~~~~~ 271 (307)
T d1a06a_ 240 AKDFIRHLMEKDPEKRFTCEQALQHPWIAGDT 271 (307)
T ss_dssp HHHHHHHHSCSSGGGSCCHHHHHHSTTTTSSC
T ss_pred HHHHHHHHccCCHhHCcCHHHHhcCHhhCCCC
Confidence 99999999999999999999999999998654
|
| >d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Aurora-related kinase 1 (aurora-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.9e-64 Score=466.29 Aligned_cols=256 Identities=32% Similarity=0.574 Sum_probs=231.4
Q ss_pred cccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEE
Q 042823 22 MLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHV 101 (477)
Q Consensus 22 ~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~l 101 (477)
.++|++++.||+|+||+||+|+++.+++.||+|++.+...........+.+|+.++..+ +|||||++++++.+++.+|+
T Consensus 5 l~dy~i~~~iG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~~~~~~~~~~~~~i 83 (263)
T d2j4za1 5 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL-RHPNILRLYGYFHDATRVYL 83 (263)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTC-CCTTBCCEEEEEECSSEEEE
T ss_pred hhHeEEEEEEecCCCcEEEEEEECCCCcEEEEEEEchHHccChHHHHHHHHHHHHHHhc-CCCCCCeEEEEEEECCEEEE
Confidence 36899999999999999999999999999999999764333334456788999999999 79999999999999999999
Q ss_pred EEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCCCc
Q 042823 102 VMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQ 181 (477)
Q Consensus 102 v~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~ 181 (477)
|||||+||+|.+++.+.+.+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+|.......
T Consensus 84 vmEy~~~g~L~~~l~~~~~l~e~~~~~i~~qi~~al~~lH~~~ivHrDiKp~Nill---~~~~~~kl~DFG~a~~~~~~~ 160 (263)
T d2j4za1 84 ILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLL---GSAGELKIADFGWSVHAPSSR 160 (263)
T ss_dssp EEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE---CTTSCEEECCCCSCSCCCCCC
T ss_pred EEeecCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeeeecccccee---cCCCCEeecccceeeecCCCc
Confidence 99999999999999999999999999999999999999999999999999999999 778899999999998765433
Q ss_pred ceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCCCCHHHHHHH
Q 042823 182 VYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLV 260 (477)
Q Consensus 182 ~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li 260 (477)
.....||+.|+|||++.+ .|+.++|||||||++|+|++|++||.+.+..+.+..+.+....++ +.+|+++++||
T Consensus 161 -~~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~p----~~~s~~~~~li 235 (263)
T d2j4za1 161 -RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGARDLI 235 (263)
T ss_dssp -CEETTEEGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCCCCC----TTSCHHHHHHH
T ss_pred -ccccCCCCcccCHHHHcCCCCCchhhhhhHhHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCC----ccCCHHHHHHH
Confidence 356689999999999986 589999999999999999999999999888888888888766544 35899999999
Q ss_pred HHhcccCccccCCHHHHhcCcccCcC
Q 042823 261 RRMLTKDPKRRITAAQVLEHPWLRES 286 (477)
Q Consensus 261 ~~~l~~dp~~R~s~~~~l~h~~~~~~ 286 (477)
.+||++||++|||+.|+|+||||+..
T Consensus 236 ~~~L~~dp~~R~t~~eil~hp~~~~~ 261 (263)
T d2j4za1 236 SRLLKHNPSQRPMLREVLEHPWITAN 261 (263)
T ss_dssp HHHTCSSGGGSCCHHHHHTCHHHHHH
T ss_pred HHHccCCHhHCcCHHHHHcCcCcCCc
Confidence 99999999999999999999999753
|
| >d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: pak1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.4e-62 Score=463.01 Aligned_cols=263 Identities=27% Similarity=0.442 Sum_probs=228.3
Q ss_pred ccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCe
Q 042823 19 EDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETA 98 (477)
Q Consensus 19 ~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~ 98 (477)
.++.++|++.+.||+|+||+||+|.++.+|+.||+|++..... ...+.+.+|+.+++.+ +|||||+++++|.+++.
T Consensus 16 ~dp~~~Y~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~~~~~~~---~~~~~~~~E~~il~~l-~HpnIv~~~~~~~~~~~ 91 (293)
T d1yhwa1 16 GDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQ---PKKELIINEILVMREN-KNPNIVNYLDSYLVGDE 91 (293)
T ss_dssp SCTTTTBCSCEECCCSSSCEEEEEEBTTTCCEEEEEEEEGGGC---SCHHHHHHHHHHHHHC-CCTTBCCEEEEEEETTE
T ss_pred CCcccccEEEEEEecCcCcEEEEEEECCCCCEEEEEEEecccC---hHHHHHHHHHHHHHhC-CCCCEeeEeEEEEECCE
Confidence 3456789999999999999999999999999999999875432 2346789999999999 79999999999999999
Q ss_pred EEEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccC
Q 042823 99 VHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFE 178 (477)
Q Consensus 99 ~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~ 178 (477)
+|+|||||+||+|.+++.+ +.+++.+++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+|....
T Consensus 92 ~~ivmEy~~gg~L~~~~~~-~~l~~~~~~~i~~qi~~aL~yLH~~~iiHrDiKp~NILl---~~~~~vkl~DFG~a~~~~ 167 (293)
T d1yhwa1 92 LWVVMEYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILL---GMDGSVKLTDFGFCAQIT 167 (293)
T ss_dssp EEEEEECCTTCBHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE---CTTCCEEECCCTTCEECC
T ss_pred EEEEEEecCCCcHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCcHHHeEE---CCCCcEeeccchhheeec
Confidence 9999999999999987765 569999999999999999999999999999999999999 677899999999998765
Q ss_pred CC-cceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCCCCHHH
Q 042823 179 EG-QVYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTA 256 (477)
Q Consensus 179 ~~-~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 256 (477)
.. ......+||+.|+|||++.+ .|+.++|||||||++|+|+||.+||.+.+.......+...... ....++.+|+++
T Consensus 168 ~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~~~~~~~~-~~~~~~~~s~~~ 246 (293)
T d1yhwa1 168 PEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTP-ELQNPEKLSAIF 246 (293)
T ss_dssp STTCCBCCCCSCGGGCCHHHHSSSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHHCSC-CCSSGGGSCHHH
T ss_pred cccccccccccCCCccChhhhcCCCCCchhceehHhHHHHHHhhCCCCCCCCCHHHHHHHHHhCCCC-CCCCcccCCHHH
Confidence 43 33456789999999999975 5899999999999999999999999988877766666554322 122335689999
Q ss_pred HHHHHHhcccCccccCCHHHHhcCcccCcCCCCC
Q 042823 257 KDLVRRMLTKDPKRRITAAQVLEHPWLRESGEAS 290 (477)
Q Consensus 257 ~~li~~~l~~dp~~R~s~~~~l~h~~~~~~~~~~ 290 (477)
++||.+||+.||++|||+.|+|+||||+.....+
T Consensus 247 ~~li~~~L~~dP~~R~s~~eil~Hp~~~~~~~~~ 280 (293)
T d1yhwa1 247 RDFLNRCLDMDVEKRGSAKELLQHQFLKIAKPLS 280 (293)
T ss_dssp HHHHHHHTCSSTTTSCCHHHHTTCGGGGGCCCGG
T ss_pred HHHHHHHccCChhHCcCHHHHhcCHhhCCCCCCC
Confidence 9999999999999999999999999998654433
|
| >d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell cycle checkpoint kinase chk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.6e-63 Score=464.60 Aligned_cols=260 Identities=28% Similarity=0.520 Sum_probs=222.0
Q ss_pred ccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEE
Q 042823 21 VMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVH 100 (477)
Q Consensus 21 ~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~ 100 (477)
+.++|++++.||+|+||+||+|+++.+|+.||+|++.+.... .....+.+|+.+++++ +|||||++++++.+++.+|
T Consensus 3 f~~dy~~~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~--~~~~~~~~Ei~~l~~l-~HpnIv~~~~~~~~~~~~~ 79 (271)
T d1nvra_ 3 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICINKML-NHENVVKFYGHRREGNIQY 79 (271)
T ss_dssp TTTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC---------CHHHHHHHHHTC-CCTTBCCEEEEEEETTEEE
T ss_pred CCcceEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcc--hHHHHHHHHHHHHHhC-CCCCEeeEeeeeccCceeE
Confidence 567899999999999999999999999999999999765322 2345688999999999 7999999999999999999
Q ss_pred EEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCCC
Q 042823 101 VVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEG 180 (477)
Q Consensus 101 lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~ 180 (477)
||||||+||+|.+++...+.+++.+++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+|......
T Consensus 80 ivmEy~~gg~L~~~l~~~~~l~e~~~~~i~~qi~~al~ylH~~~IiHrDiKp~NILl---~~~~~~KL~DFG~a~~~~~~ 156 (271)
T d1nvra_ 80 LFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL---DERDNLKISDFGLATVFRYN 156 (271)
T ss_dssp EEEECCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEE---CTTCCEEECCCTTCEECEET
T ss_pred EEEeccCCCcHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHcCCccCcccHHHEEE---CCCCCEEEccchhheeeccC
Confidence 999999999999999888889999999999999999999999999999999999999 77789999999999876433
Q ss_pred c---ceecccccccccchhhhhh-hc-CCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCCCCHH
Q 042823 181 Q---VYRDIVGSGFYIAPEVLRR-RY-GKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISST 255 (477)
Q Consensus 181 ~---~~~~~~gt~~y~aPE~~~~-~~-~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 255 (477)
. .....+||+.|+|||++.+ .+ +.++||||+||++|+|+||++||.................. ...+++.+|++
T Consensus 157 ~~~~~~~~~~GT~~Y~APE~~~~~~~~~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~~~~~~~~~-~~~~~~~~s~~ 235 (271)
T d1nvra_ 157 NRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKT-YLNPWKKIDSA 235 (271)
T ss_dssp TEECCBCCCCSCGGGSCTHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSSTTSHHHHHHHTTCT-TSTTGGGSCHH
T ss_pred CccccccceeeCcCccCHhHhcCCCCCCCceeeeHhHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCC-CCCccccCCHH
Confidence 2 2345689999999999975 34 67899999999999999999999876655444333333222 22345678999
Q ss_pred HHHHHHHhcccCccccCCHHHHhcCcccCcCC
Q 042823 256 AKDLVRRMLTKDPKRRITAAQVLEHPWLRESG 287 (477)
Q Consensus 256 ~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~~ 287 (477)
+++||.+||+.||++|||++|+|+||||++.-
T Consensus 236 ~~~li~~~L~~dP~~R~t~~eil~hpwf~~~l 267 (271)
T d1nvra_ 236 PLALLHKILVENPSARITIPDIKKDRWYNKPL 267 (271)
T ss_dssp HHHHHHHHSCSSTTTSCCHHHHTTCTTTTCCC
T ss_pred HHHHHHHHcCCChhHCcCHHHHhcCHhhCcCC
Confidence 99999999999999999999999999998643
|
| >d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Death-associated protein kinase, Dap species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.9e-62 Score=464.51 Aligned_cols=268 Identities=38% Similarity=0.650 Sum_probs=240.7
Q ss_pred cccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccc---hhhHHHHHHHHHHHHhccCCCCeeEEEEEEE
Q 042823 18 YEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMR---LAENDMIRREIQIRLYLSGQPNVVEFKSTYE 94 (477)
Q Consensus 18 ~~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~---~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~ 94 (477)
.+++.++|++++.||+|+||+||+|+++.+|+.||||++.+..... ......+.+|+.+++++ +|||||+++++|+
T Consensus 5 ~~~i~d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~~~~~~~ 83 (293)
T d1jksa_ 5 QENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEI-QHPNVITLHEVYE 83 (293)
T ss_dssp CSCGGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHC-CCTTBCCEEEEEE
T ss_pred CCCcccCEEEeEEEecCCCeEEEEEEECCCCCEEEEEEEEhhhcchhhhhHHHHHHHHHHHHHHhC-CCCCCCcEEEEEE
Confidence 3567889999999999999999999999999999999997653221 22457789999999999 7999999999999
Q ss_pred eCCeEEEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecC-CCCCEEEeecCC
Q 042823 95 DETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRD-DNALLKVTDFGS 173 (477)
Q Consensus 95 ~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~-~~~~~kl~Dfg~ 173 (477)
+++.+|||||||+||+|.+++...+.+++..++.++.||+.||.|||++||+||||||+||++...+ ....+||+|||+
T Consensus 84 ~~~~~~iv~E~~~gg~L~~~i~~~~~l~~~~~~~~~~qi~~al~yLH~~~ivHrDiKp~Nill~~~~~~~~~vkl~DfG~ 163 (293)
T d1jksa_ 84 NKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL 163 (293)
T ss_dssp CSSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCSSSSSCCEEECCCTT
T ss_pred ECCEEEEEEEcCCCccccchhccccccchhHHHHHHHHHHHHHHhhhhcceeecccccceEEEecCCCcccceEecchhh
Confidence 9999999999999999999999999999999999999999999999999999999999999994332 223699999999
Q ss_pred ccccCCCcceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCCC
Q 042823 174 ALLFEEGQVYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSI 252 (477)
Q Consensus 174 a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 252 (477)
|.............||+.|+|||++.+ .|+.++||||+||++|+|+||.+||.+.+..+.+..+......++...++.+
T Consensus 164 a~~~~~~~~~~~~~~t~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 243 (293)
T d1jksa_ 164 AHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNT 243 (293)
T ss_dssp CEECTTSCBCSCCCCCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHTTCCCCCHHHHTTS
T ss_pred hhhcCCCccccccCCCCcccCHHHHcCCCCCCcccchhhhHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCCCCchhcCCC
Confidence 988876666667789999999999975 5899999999999999999999999999999999999988877766666789
Q ss_pred CHHHHHHHHHhcccCccccCCHHHHhcCcccCcC
Q 042823 253 SSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRES 286 (477)
Q Consensus 253 ~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~ 286 (477)
|+++++||++||+.||++|||++++|+||||+..
T Consensus 244 s~~~~~li~~~L~~dP~~R~s~~eil~hp~~~~~ 277 (293)
T d1jksa_ 244 SALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPK 277 (293)
T ss_dssp CHHHHHHHHTTSCSSGGGSCCHHHHHHSTTTCC-
T ss_pred CHHHHHHHHHHccCChhHCcCHHHHhcCcccCCC
Confidence 9999999999999999999999999999999754
|
| >d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: gamma-subunit of glycogen phosphorylase kinase (Phk) species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=100.00 E-value=7.9e-62 Score=454.90 Aligned_cols=262 Identities=36% Similarity=0.673 Sum_probs=239.5
Q ss_pred ccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccch------hhHHHHHHHHHHHHhccCCCCeeEEEEEEE
Q 042823 21 VMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRL------AENDMIRREIQIRLYLSGQPNVVEFKSTYE 94 (477)
Q Consensus 21 ~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~------~~~~~~~~e~~~~~~l~~hpniv~~~~~~~ 94 (477)
|.++|++.+.||+|+||+||+|+++.+|+.||||++.+...... .....+.+|+.++.++..|||||++++++.
T Consensus 1 f~~~y~~~~~iG~G~~g~V~~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~ 80 (277)
T d1phka_ 1 FYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYE 80 (277)
T ss_dssp CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEE
T ss_pred CcccCEEceEEecCcCeEEEEEEECCCCCEEEEEEEecccccchhHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeecc
Confidence 46899999999999999999999999999999999987643221 123467899999999977999999999999
Q ss_pred eCCeEEEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCc
Q 042823 95 DETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSA 174 (477)
Q Consensus 95 ~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a 174 (477)
+++.+|||||||+||+|.+++..++.+++.+++.++.||+.||.|||++||+||||||+||++ +.++.+||+|||++
T Consensus 81 ~~~~~~ivmE~~~~g~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill---~~~~~~kl~DFG~a 157 (277)
T d1phka_ 81 TNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILL---DDDMNIKLTDFGFS 157 (277)
T ss_dssp CSSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE---CTTCCEEECCCTTC
T ss_pred cCcceEEEEEcCCCchHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCcccccccceEEE---cCCCCeEEccchhe
Confidence 999999999999999999999999999999999999999999999999999999999999999 78889999999999
Q ss_pred cccCCCcceecccccccccchhhhhh-------hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCC
Q 042823 175 LLFEEGQVYRDIVGSGFYIAPEVLRR-------RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTD 247 (477)
Q Consensus 175 ~~~~~~~~~~~~~gt~~y~aPE~~~~-------~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~ 247 (477)
............+||+.|+|||++.+ .++.++||||+||++|+|++|++||.+.+.......+..+...++.+
T Consensus 158 ~~~~~~~~~~~~~gt~~y~~PE~~~~~~~~~~~~~~~~~DiwslGvilyeml~g~~Pf~~~~~~~~~~~i~~~~~~~~~~ 237 (277)
T d1phka_ 158 CQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSP 237 (277)
T ss_dssp EECCTTCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTT
T ss_pred eEccCCCceeeeeccCCCCCHHHhhccccccCCCCCchheEcccchhhhhhccCCCCCCCCCHHHHHHHHHhCCCCCCCc
Confidence 98876666667789999999999853 36889999999999999999999999999988888999988877777
Q ss_pred CCCCCCHHHHHHHHHhcccCccccCCHHHHhcCcccCc
Q 042823 248 PWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRE 285 (477)
Q Consensus 248 ~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~ 285 (477)
.++.+|+++++||.+||+.||++|||++|+|+||||++
T Consensus 238 ~~~~~s~~~~~li~~~L~~~p~~R~s~~eil~h~~~~~ 275 (277)
T d1phka_ 238 EWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQ 275 (277)
T ss_dssp TGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTSGGGCT
T ss_pred ccccCCHHHHHHHHHHccCChhHCcCHHHHHcCHHHHH
Confidence 77889999999999999999999999999999999975
|
| >d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine protein kinase TAO2 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=3.9e-62 Score=463.94 Aligned_cols=261 Identities=25% Similarity=0.381 Sum_probs=231.7
Q ss_pred cccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeE
Q 042823 20 DVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAV 99 (477)
Q Consensus 20 ~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~ 99 (477)
++.++|++++.||+|+||+||+|+++.+|+.||||++.+...........+.+|+.+++++ +|||||++++++.+++.+
T Consensus 12 dp~~~y~~l~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~~~~~~~~~~~~ 90 (309)
T d1u5ra_ 12 DPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKL-RHPNTIQYRGCYLREHTA 90 (309)
T ss_dssp CHHHHEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEECCSSCHHHHHHHHHHHHHHHTTC-CCTTBCCEEEEEEETTEE
T ss_pred CcHHhcEeeEEEecCCCeEEEEEEECCCCcEEEEEEEchhhccCHHHHHHHHHHHHHHHHC-CCCCEeeEEEEEEECCEE
Confidence 4566799999999999999999999999999999999876554555567789999999999 799999999999999999
Q ss_pred EEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCC
Q 042823 100 HVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEE 179 (477)
Q Consensus 100 ~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~ 179 (477)
|+|||||.||+|..++...+.+++.+++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+|.....
T Consensus 91 ~iv~E~~~~g~l~~~~~~~~~l~e~~~~~i~~qi~~aL~yLH~~~iiHrDiKp~NILl---~~~~~~Kl~DFG~a~~~~~ 167 (309)
T d1u5ra_ 91 WLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILL---SEPGLVKLGDFGSASIMAP 167 (309)
T ss_dssp EEEEECCSEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEE---ETTTEEEECCCTTCBSSSS
T ss_pred EEEEEecCCCchHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccCCCcceEEE---CCCCCEEEeecccccccCC
Confidence 9999999999998888888899999999999999999999999999999999999999 6788999999999987644
Q ss_pred Ccceecccccccccchhhhh----hhcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCCCCHH
Q 042823 180 GQVYRDIVGSGFYIAPEVLR----RRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISST 255 (477)
Q Consensus 180 ~~~~~~~~gt~~y~aPE~~~----~~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 255 (477)
. ....||+.|+|||++. +.|+.++|||||||++|+|++|.+||.+.+....+..+..+..+... .+.+|++
T Consensus 168 ~---~~~~GT~~Y~APE~~~~~~~~~y~~~~DiwSlGvilyel~~g~~Pf~~~~~~~~~~~i~~~~~~~~~--~~~~s~~ 242 (309)
T d1u5ra_ 168 A---NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQ--SGHWSEY 242 (309)
T ss_dssp B---CCCCSCGGGCCHHHHTTTTSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCS--CTTSCHH
T ss_pred C---CccccCccccCHHHHhccCCCCcCchhhhhhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCC--CCCCCHH
Confidence 3 3568999999999985 35899999999999999999999999988888887777776544322 3468999
Q ss_pred HHHHHHHhcccCccccCCHHHHhcCcccCcCCCC
Q 042823 256 AKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEA 289 (477)
Q Consensus 256 ~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~~~~ 289 (477)
+++||.+||+.||++|||++++|+||||......
T Consensus 243 ~~~li~~~L~~dP~~Rpt~~ell~Hp~~~~~~~~ 276 (309)
T d1u5ra_ 243 FRNFVDSCLQKIPQDRPTSEVLLKHRFVLRERPP 276 (309)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHTTCHHHHSCCCT
T ss_pred HHHHHHHHCcCChhHCcCHHHHHhCHHhcCCCCc
Confidence 9999999999999999999999999999865433
|
| >d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: Caenorhabditis elegans, pjk4 [TaxId: 6239]
Probab=100.00 E-value=3.8e-62 Score=471.83 Aligned_cols=264 Identities=33% Similarity=0.578 Sum_probs=239.8
Q ss_pred ccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCe
Q 042823 19 EDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETA 98 (477)
Q Consensus 19 ~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~ 98 (477)
+++.++|++++.||+|+||+||+|+++.+|+.||||++.+.. ......+.+|+.++.++ +|||||++++++++++.
T Consensus 22 ~~il~~Y~i~~~lG~G~fg~Vy~~~~~~~g~~vAvK~i~~~~---~~~~~~~~~E~~il~~l-~HpnIv~~~~~~~~~~~ 97 (350)
T d1koaa2 22 DHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPH---ESDKETVRKEIQTMSVL-RHPTLVNLHDAFEDDNE 97 (350)
T ss_dssp SCGGGTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECCCS---HHHHHHHHHHHHHHHHT-CCTTBCCEEEEEEETTE
T ss_pred CCCccCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEcccc---hhhHHHHHHHHHHHHhC-CCCCCCcEEEEEEECCE
Confidence 467889999999999999999999999999999999996543 23456788999999999 79999999999999999
Q ss_pred EEEEEeccCCCchHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCcccc
Q 042823 99 VHVVMELCEGGDLFDRIIA-KGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLF 177 (477)
Q Consensus 99 ~~lv~e~~~gg~L~~~l~~-~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~ 177 (477)
+|||||||+||+|.+++.. .+.+++.+++.++.||+.||.|||++|||||||||+|||+.. +.++.+||+|||+|...
T Consensus 98 ~~ivmE~~~gg~L~~~l~~~~~~l~e~~~~~i~~qi~~aL~ylH~~~iiHrDiKp~NIll~~-~~~~~vkL~DFG~a~~~ 176 (350)
T d1koaa2 98 MVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTT-KRSNELKLIDFGLTAHL 176 (350)
T ss_dssp EEEEECCCCSCBHHHHHTCTTSCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESS-TTSCCEEECCCTTCEEC
T ss_pred EEEEEEcCCCCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCeeeeechhHeeecc-CCCCeEEEeecchheec
Confidence 9999999999999999854 567999999999999999999999999999999999998843 23578999999999988
Q ss_pred CCCcceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCCCCHHH
Q 042823 178 EEGQVYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTA 256 (477)
Q Consensus 178 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 256 (477)
..........||+.|+|||++.+ .|+.++|||||||++|+|++|.+||.+.+..+.+..+......++...++.+|+++
T Consensus 177 ~~~~~~~~~~gT~~Y~aPEv~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~ 256 (350)
T d1koaa2 177 DPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDG 256 (350)
T ss_dssp CTTSCEEEECSCTTTCCHHHHHTCCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCSCCGGGGGCCHHH
T ss_pred ccccccceecCcccccCHHHHcCCCCChhHhhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCcccccCCCHHH
Confidence 77666677899999999999976 58999999999999999999999999999999999999888877777777899999
Q ss_pred HHHHHHhcccCccccCCHHHHhcCcccCcCC
Q 042823 257 KDLVRRMLTKDPKRRITAAQVLEHPWLRESG 287 (477)
Q Consensus 257 ~~li~~~l~~dp~~R~s~~~~l~h~~~~~~~ 287 (477)
++||.+||+.||++|||++|+|+||||+...
T Consensus 257 ~~li~~~L~~dP~~R~t~~eil~hp~~~~~~ 287 (350)
T d1koaa2 257 KDFIRKLLLADPNTRMTIHQALEHPWLTPGN 287 (350)
T ss_dssp HHHHHHHCCSSGGGSCCHHHHHHSTTTSCTT
T ss_pred HHHHHHHccCChhHCcCHHHHhcCcccCCCC
Confidence 9999999999999999999999999998654
|
| >d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: 3-phosphoinositide dependent protein kinase-1 Pdk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2e-62 Score=461.24 Aligned_cols=257 Identities=29% Similarity=0.528 Sum_probs=228.3
Q ss_pred cccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEE
Q 042823 22 MLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHV 101 (477)
Q Consensus 22 ~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~l 101 (477)
.++|++++.||+|+||+||+|+++.+|+.||||++.+...........+.+|+.++.++ +|||||++++++++++.+|+
T Consensus 7 p~dy~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~l~~~~~~~~~~~i 85 (288)
T d1uu3a_ 7 PEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DHPFFVKLYFTFQDDEKLYF 85 (288)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHC-CSTTBCCEEEEEECSSEEEE
T ss_pred CCCCEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccCHHHHHHHHHHHHHHHHc-CCCCeeEEEEEEEECCEEEE
Confidence 36899999999999999999999999999999999764333334456789999999999 79999999999999999999
Q ss_pred EEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCCC-
Q 042823 102 VMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEG- 180 (477)
Q Consensus 102 v~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~- 180 (477)
|||||+||+|.+++...+.+++..++.++.|++.||.|||++||+||||||+|||+ +.++.+||+|||+|......
T Consensus 86 vmEy~~gg~L~~~~~~~~~l~e~~~~~~~~qi~~al~ylH~~~iiHrDiKp~NIll---~~~~~vkl~DFG~a~~~~~~~ 162 (288)
T d1uu3a_ 86 GLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILL---NEDMHIQITDFGTAKVLSPES 162 (288)
T ss_dssp EECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE---CTTSCEEECCCTTCEECC---
T ss_pred EEEccCCCCHHHhhhccCCCCHHHHHHHHHHHHHHHHhhccccEEcCcCCcccccc---CCCceEEecccccceecccCC
Confidence 99999999999999999999999999999999999999999999999999999999 77889999999999876432
Q ss_pred --cceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCCCCHHHH
Q 042823 181 --QVYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAK 257 (477)
Q Consensus 181 --~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 257 (477)
......+||+.|+|||++.+ .|+.++|||||||++|+|+||.+||.+.+......++.++...++ ..+|++++
T Consensus 163 ~~~~~~~~~GT~~Y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~~~~~p----~~~s~~~~ 238 (288)
T d1uu3a_ 163 KQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFP----EKFFPKAR 238 (288)
T ss_dssp -------CCCCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHTTCCCCC----TTCCHHHH
T ss_pred cccccccccCCccccCceeeccCCCCcccceehhhHHHHHHhhCCCCCCCcCHHHHHHHHHcCCCCCC----ccCCHHHH
Confidence 22345689999999999975 589999999999999999999999999988888999988876554 36899999
Q ss_pred HHHHHhcccCccccCCHHH------HhcCcccCcC
Q 042823 258 DLVRRMLTKDPKRRITAAQ------VLEHPWLRES 286 (477)
Q Consensus 258 ~li~~~l~~dp~~R~s~~~------~l~h~~~~~~ 286 (477)
+||.+||+.||++|||++| +++||||+..
T Consensus 239 ~li~~~L~~dP~~R~t~~e~~~~~~i~~Hpff~~i 273 (288)
T d1uu3a_ 239 DLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV 273 (288)
T ss_dssp HHHHTTSCSSGGGSTTSGGGTCHHHHHTSGGGTTC
T ss_pred HHHHHHccCCHhHCcCHHHHcCCHHHHcCCccCCC
Confidence 9999999999999999988 5789999764
|
| >d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]
Probab=100.00 E-value=9.2e-62 Score=469.47 Aligned_cols=264 Identities=31% Similarity=0.571 Sum_probs=239.7
Q ss_pred ccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCe
Q 042823 19 EDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETA 98 (477)
Q Consensus 19 ~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~ 98 (477)
..+.++|++++.||+|+||+||+|+++.+|+.||+|++.+.. ......+.+|+.+++++ +|||||+++++|++++.
T Consensus 25 ~~~~d~Y~i~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~---~~~~~~~~~Ei~il~~l-~HpnIv~~~~~~~~~~~ 100 (352)
T d1koba_ 25 GSVYDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPY---PLDKYTVKNEISIMNQL-HHPKLINLHDAFEDKYE 100 (352)
T ss_dssp SCGGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS---HHHHHHHHHHHHHHTTC-CSTTBCCEEEEEECSSE
T ss_pred CCcccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEECCcc---hhHHHHHHHHHHHHHhC-CCCCCCcEEEEEEECCE
Confidence 356688999999999999999999999999999999987543 23456788999999999 79999999999999999
Q ss_pred EEEEEeccCCCchHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCcccc
Q 042823 99 VHVVMELCEGGDLFDRIIAKG-YNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLF 177 (477)
Q Consensus 99 ~~lv~e~~~gg~L~~~l~~~~-~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~ 177 (477)
+|||||||+||+|.+++...+ ++++.+++.++.||+.||.|||++||+||||||+|||+.. ...+.+||+|||+|...
T Consensus 101 ~~ivmE~~~gg~L~~~~~~~~~~l~e~~~~~i~~qi~~aL~ylH~~~iiHRDiKp~NILl~~-~~~~~vkL~DFGla~~~ 179 (352)
T d1koba_ 101 MVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCET-KKASSVKIIDFGLATKL 179 (352)
T ss_dssp EEEEEECCCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESS-TTCCCEEECCCTTCEEC
T ss_pred EEEEEEcCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccccccccccc-cCCCeEEEeecccceec
Confidence 999999999999998876654 6999999999999999999999999999999999999832 25678999999999988
Q ss_pred CCCcceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCCCCHHH
Q 042823 178 EEGQVYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTA 256 (477)
Q Consensus 178 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 256 (477)
..........||+.|+|||++.+ .|+.++|||||||++|+|+||.+||.+.+....+..+..+...++...++.+|+++
T Consensus 180 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~ 259 (352)
T d1koba_ 180 NPDEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEA 259 (352)
T ss_dssp CTTSCEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHCCCCCCSSTTTTSCHHH
T ss_pred CCCCceeeccCcccccCHHHHcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCcccccCCCHHH
Confidence 77766777899999999999975 59999999999999999999999999999999999999998888888888999999
Q ss_pred HHHHHHhcccCccccCCHHHHhcCcccCcCC
Q 042823 257 KDLVRRMLTKDPKRRITAAQVLEHPWLRESG 287 (477)
Q Consensus 257 ~~li~~~l~~dp~~R~s~~~~l~h~~~~~~~ 287 (477)
++||.+||++||.+|||+.|+|+||||+...
T Consensus 260 ~~li~~~L~~dp~~R~s~~eil~Hp~~~~~~ 290 (352)
T d1koba_ 260 KDFIKNLLQKEPRKRLTVHDALEHPWLKGDH 290 (352)
T ss_dssp HHHHHTTSCSSGGGSCCHHHHHTSTTTSSCC
T ss_pred HHHHHHHccCChhHCcCHHHHhcCHhhCCCc
Confidence 9999999999999999999999999998643
|
| >d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: STE20-like serine/threonine-protein kinase, SLK species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=9.3e-62 Score=457.02 Aligned_cols=258 Identities=26% Similarity=0.387 Sum_probs=226.8
Q ss_pred ccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEE
Q 042823 21 VMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVH 100 (477)
Q Consensus 21 ~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~ 100 (477)
..+.|++++.||+|+||+||+|+++.+++.||+|++.+... .....+.+|+++++++ +|||||++++++.+++.+|
T Consensus 10 p~d~Y~i~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~---~~~~~~~~E~~il~~l-~HpnIv~l~~~~~~~~~~~ 85 (288)
T d2jfla1 10 PEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSE---EELEDYMVEIDILASC-DHPNIVKLLDAFYYENNLW 85 (288)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECSSS---GGGGGTHHHHHHHHHC-CCTTBCCEEEEEEETTEEE
T ss_pred cccCeEEeEEEeeCCCcEEEEEEECCCCeEEEEEEECcCCH---HHHHHHHHHHHHHHhC-CCCCCCeEEEEEeeCCeEE
Confidence 45679999999999999999999999999999999976432 3345678999999999 7999999999999999999
Q ss_pred EEEeccCCCchHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCC
Q 042823 101 VVMELCEGGDLFDRIIA-KGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEE 179 (477)
Q Consensus 101 lv~e~~~gg~L~~~l~~-~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~ 179 (477)
+|||||+||+|.+++.+ .+.+++.+++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+|.....
T Consensus 86 lvmEy~~~g~L~~~~~~~~~~l~e~~~~~i~~qi~~gL~ylH~~~ivHrDiKp~NIll---~~~~~~Kl~DFG~a~~~~~ 162 (288)
T d2jfla1 86 ILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILF---TLDGDIKLADFGVSAKNTR 162 (288)
T ss_dssp EEEECCTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE---CTTSCEEECCCTTCEECHH
T ss_pred EEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEeecChhheeE---CCCCCEEEEechhhhccCC
Confidence 99999999999998776 4569999999999999999999999999999999999999 7788999999999976543
Q ss_pred C-cceecccccccccchhhhh------hhcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCCC
Q 042823 180 G-QVYRDIVGSGFYIAPEVLR------RRYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSI 252 (477)
Q Consensus 180 ~-~~~~~~~gt~~y~aPE~~~------~~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 252 (477)
. ......+||+.|+|||++. ..|+.++|||||||++|+|+||.+||.+.+..+.+..+..+..+... .++.+
T Consensus 163 ~~~~~~~~~Gt~~y~APE~l~~~~~~~~~y~~k~DiwSlGvilyemltg~~Pf~~~~~~~~~~~i~~~~~~~~~-~~~~~ 241 (288)
T d2jfla1 163 TIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLA-QPSRW 241 (288)
T ss_dssp HHHHHTCCCSCCTTCCHHHHTTCSTTTSSTTTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHHHSCCCCCS-SGGGS
T ss_pred CcccccccccccccCCHHHHhhcccCCCCCChhhhHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCC-ccccC
Confidence 2 2234568999999999983 34889999999999999999999999999888888888877643322 23568
Q ss_pred CHHHHHHHHHhcccCccccCCHHHHhcCcccCcC
Q 042823 253 SSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRES 286 (477)
Q Consensus 253 ~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~ 286 (477)
|+++++||.+||+.||++|||+.|+|+||||+..
T Consensus 242 s~~~~~li~~~L~~dp~~R~t~~ell~hp~~~~~ 275 (288)
T d2jfla1 242 SSNFKDFLKKCLEKNVDARWTTSQLLQHPFVTVD 275 (288)
T ss_dssp CHHHHHHHHHHSCSSTTTSCCHHHHTTSGGGCCC
T ss_pred CHHHHHHHHHHccCChhHCcCHHHHhcCcccCCC
Confidence 9999999999999999999999999999999754
|
| >d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Pkb kinase (Akt-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.4e-61 Score=462.33 Aligned_cols=257 Identities=32% Similarity=0.521 Sum_probs=232.8
Q ss_pred cccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEE
Q 042823 22 MLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHV 101 (477)
Q Consensus 22 ~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~l 101 (477)
.++|.+++.||+|+||+||+|+++.+|+.||+|++.+...........+.+|+.++..+ +||||++++++|+++..+|+
T Consensus 4 l~dy~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l-~hp~Iv~l~~~~~~~~~~~i 82 (337)
T d1o6la_ 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNT-RHPFLTALKYAFQTHDRLCF 82 (337)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSC-CCTTBCCEEEEEECSSEEEE
T ss_pred hHhcEEEEEEecCcCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhC-CCCCEEEEEeeecccccccc
Confidence 46799999999999999999999999999999999765433334467788999999999 79999999999999999999
Q ss_pred EEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCC-C
Q 042823 102 VMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEE-G 180 (477)
Q Consensus 102 v~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~-~ 180 (477)
|||||+||+|.+++.+.+.+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+|+.... .
T Consensus 83 v~ey~~gg~L~~~~~~~~~~~e~~~~~~~~qil~al~ylH~~~iiHRDlKP~NILl---~~~g~vkl~DFG~a~~~~~~~ 159 (337)
T d1o6la_ 83 VMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLML---DKDGHIKITDFGLCKEGISDG 159 (337)
T ss_dssp EEECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEE---CTTSCEEECCCTTCBCSCCTT
T ss_pred ceeccCCCchhhhhhcccCCcHHHHHHHHHHHhhhhhhhhhcCccccccCHHHeEe---cCCCCEEEeecccccccccCC
Confidence 99999999999999999999999999999999999999999999999999999999 7789999999999987543 3
Q ss_pred cceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCCCCHHHHHH
Q 042823 181 QVYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDL 259 (477)
Q Consensus 181 ~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l 259 (477)
......+||+.|+|||++.+ .|+.++|||||||++|+|++|++||.+.+.......+..+...++ +.+|+++++|
T Consensus 160 ~~~~~~~GT~~Y~aPE~~~~~~y~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~~i~~~~~~~p----~~~s~~~~dl 235 (337)
T d1o6la_ 160 ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFP----RTLSPEAKSL 235 (337)
T ss_dssp CCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCC----TTSCHHHHHH
T ss_pred cccccceeCHHHhhhhhccCCCCChhhcccchhhHHHHHHHCCCCCCCcCHHHHHHHHhcCCCCCC----ccCCHHHHHH
Confidence 44556789999999999975 699999999999999999999999999999888888888876554 4689999999
Q ss_pred HHHhcccCccccCC-----HHHHhcCcccCcC
Q 042823 260 VRRMLTKDPKRRIT-----AAQVLEHPWLRES 286 (477)
Q Consensus 260 i~~~l~~dp~~R~s-----~~~~l~h~~~~~~ 286 (477)
|++||++||.+||+ ++++++||||+..
T Consensus 236 i~~~L~~dP~~R~~~~~~~~~eil~Hp~f~~i 267 (337)
T d1o6la_ 236 LAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSI 267 (337)
T ss_dssp HHHHTCSSTTTSTTCSTTTHHHHHTSGGGTTC
T ss_pred HHhhccCCchhhcccccccHHHHHcCcccccC
Confidence 99999999999994 9999999999753
|
| >d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase wnk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.6e-61 Score=446.92 Aligned_cols=255 Identities=19% Similarity=0.339 Sum_probs=218.9
Q ss_pred ccc-cccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEe----CC
Q 042823 23 LHY-FFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYED----ET 97 (477)
Q Consensus 23 ~~Y-~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~----~~ 97 (477)
.+| ++.+.||+|+||+||+|.++.+++.||+|++..... .......+.+|+++++++ +|||||+++++|++ +.
T Consensus 8 gry~~~~~~iG~G~fg~Vy~~~~~~~~~~va~K~i~~~~~-~~~~~~~~~~E~~il~~l-~HpnIv~~~~~~~~~~~~~~ 85 (270)
T d1t4ha_ 8 GRFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKL-TKSERQRFKEEAEMLKGL-QHPNIVRFYDSWESTVKGKK 85 (270)
T ss_dssp SCEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGS-CHHHHHHHHHHHHHHTTC-CCTTBCCEEEEEEEESSSCE
T ss_pred CCEEEeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhC-CHHHHHHHHHHHHHHHhC-CCCCeeeEEEEEeeccccCC
Confidence 344 778899999999999999999999999999876432 334567789999999999 69999999999975 45
Q ss_pred eEEEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcC--CeeccCCCCceeeeecCCCCCEEEeecCCcc
Q 042823 98 AVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMG--VMHRDLKPENFSFISRDDNALLKVTDFGSAL 175 (477)
Q Consensus 98 ~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~--ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~ 175 (477)
.+|+|||||+||+|.+++.+.+.+++.+++.++.||+.||.|||+++ |+||||||+|||+. ++++.+||+|||+|.
T Consensus 86 ~~~ivmE~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~gl~yLH~~~~~IiHrDiKp~NILl~--~~~~~~Kl~DFGla~ 163 (270)
T d1t4ha_ 86 CIVLVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFIT--GPTGSVKIGDLGLAT 163 (270)
T ss_dssp EEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEES--STTSCEEECCTTGGG
T ss_pred EEEEEEeCCCCCcHHHHHhccccccHHHHHHHHHHHHHHHHHHHHCCCCEEeCCcChhhceee--CCCCCEEEeecCcce
Confidence 68999999999999999999999999999999999999999999999 99999999999982 246789999999998
Q ss_pred ccCCCcceecccccccccchhhhhhhcCCccchHhHHHHHHHHhhCCCCCCCCChh-hHHHHHHcCCccCCCCCCCCCCH
Q 042823 176 LFEEGQVYRDIVGSGFYIAPEVLRRRYGKEIDIWSAGVILYILLSGVPPFWAETKK-GTYDAILQGEIDFDTDPWPSISS 254 (477)
Q Consensus 176 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~l~tg~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~ 254 (477)
..... .....+||+.|+|||++.+.|+.++|||||||++|+|++|.+||.+.... .....+..+..+ .......++
T Consensus 164 ~~~~~-~~~~~~GT~~Y~aPE~~~~~~~~~~DIwSlGvilyel~~g~~Pf~~~~~~~~~~~~i~~~~~~--~~~~~~~~~ 240 (270)
T d1t4ha_ 164 LKRAS-FAKAVIGTPEFMAPEMYEEKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKP--ASFDKVAIP 240 (270)
T ss_dssp GCCTT-SBEESCSSCCCCCGGGGGTCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCC--GGGGGCCCH
T ss_pred eccCC-ccCCcccCccccCHHHhCCCCCCcCchhhHHHHHHHHHHCCCCCCCcccHHHHHHHHHcCCCC--cccCccCCH
Confidence 65433 33567899999999999999999999999999999999999999776544 444555544322 122345789
Q ss_pred HHHHHHHHhcccCccccCCHHHHhcCcccC
Q 042823 255 TAKDLVRRMLTKDPKRRITAAQVLEHPWLR 284 (477)
Q Consensus 255 ~~~~li~~~l~~dp~~R~s~~~~l~h~~~~ 284 (477)
++++||.+||++||++|||++|+|+||||+
T Consensus 241 ~~~~li~~~l~~dp~~R~s~~ell~Hp~fk 270 (270)
T d1t4ha_ 241 EVKEIIEGCIRQNKDERYSIKDLLNHAFFQ 270 (270)
T ss_dssp HHHHHHHHHSCSSGGGSCCHHHHHTSGGGC
T ss_pred HHHHHHHHHccCCHhHCcCHHHHhCCcccC
Confidence 999999999999999999999999999995
|
| >d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Titin, kinase domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.3e-61 Score=461.76 Aligned_cols=261 Identities=31% Similarity=0.603 Sum_probs=237.8
Q ss_pred cccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeE
Q 042823 20 DVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAV 99 (477)
Q Consensus 20 ~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~ 99 (477)
++.++|++++.||+|+||+||+|.++.+++.||+|++.+.. .....+.+|+.++..+ +|||||+++++|++++.+
T Consensus 2 ~~~~rY~i~~~lG~G~fg~Vy~~~~~~~~~~~AiK~i~~~~----~~~~~~~~Ei~il~~l-~HpnIv~~~~~~~~~~~~ 76 (321)
T d1tkia_ 2 ELYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG----TDQVLVKKEISILNIA-RHRNILHLHESFESMEEL 76 (321)
T ss_dssp CCTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT----HHHHHHHHHHHHHHHS-CCTTBCCEEEEEEETTEE
T ss_pred CCccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEcCCc----ccHHHHHHHHHHHHhC-CCCCCCeEEEEEEECCEE
Confidence 57789999999999999999999999999999999997543 2345678999999999 799999999999999999
Q ss_pred EEEEeccCCCchHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccC
Q 042823 100 HVVMELCEGGDLFDRIIAKG-YNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFE 178 (477)
Q Consensus 100 ~lv~e~~~gg~L~~~l~~~~-~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~ 178 (477)
|+|||||+||+|.+++...+ .+++.+++.++.||+.||.|||++||+||||||+|||+.. +....+||+|||++....
T Consensus 77 ~lvmE~~~gg~L~~~i~~~~~~l~e~~~~~i~~qi~~al~yLH~~~iiHrDlKp~NIll~~-~~~~~ikl~DFG~~~~~~ 155 (321)
T d1tkia_ 77 VMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQT-RRSSTIKIIEFGQARQLK 155 (321)
T ss_dssp EEEECCCCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESS-SSCCCEEECCCTTCEECC
T ss_pred EEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCcccccccceeecC-CCceEEEEcccchhhccc
Confidence 99999999999999998765 6999999999999999999999999999999999999832 245689999999999887
Q ss_pred CCcceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCCCCHHHH
Q 042823 179 EGQVYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAK 257 (477)
Q Consensus 179 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 257 (477)
.........||+.|+|||++.+ .|+.++||||+||++|+|++|.+||.+.+....+..+.++...++...++.+|++++
T Consensus 156 ~~~~~~~~~~t~~y~ape~~~~~~~~~~~DiWSlGvily~ll~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~ 235 (321)
T d1tkia_ 156 PGDNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISIEAM 235 (321)
T ss_dssp TTCEEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCCCHHHHTTSCHHHH
T ss_pred cCCcccccccccccccchhccCCCCCchhhcccHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCChhhccCCCHHHH
Confidence 7666677789999999999875 589999999999999999999999999999999999999888887777788999999
Q ss_pred HHHHHhcccCccccCCHHHHhcCcccCcC
Q 042823 258 DLVRRMLTKDPKRRITAAQVLEHPWLRES 286 (477)
Q Consensus 258 ~li~~~l~~dp~~R~s~~~~l~h~~~~~~ 286 (477)
+||.+||+.||++|||+.|+|+||||++.
T Consensus 236 ~li~~~L~~dp~~R~s~~eil~hp~~~~~ 264 (321)
T d1tkia_ 236 DFVDRLLVKERKSRMTASEALQHPWLKQK 264 (321)
T ss_dssp HHHHTTSCSSGGGSCCHHHHHHSHHHHSC
T ss_pred HHHHHHccCChhHCcCHHHHhcCHhhccC
Confidence 99999999999999999999999999754
|
| >d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine-protein kinase Nek2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.7e-61 Score=447.38 Aligned_cols=254 Identities=30% Similarity=0.491 Sum_probs=213.3
Q ss_pred cccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEe--CCeE
Q 042823 22 MLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYED--ETAV 99 (477)
Q Consensus 22 ~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~--~~~~ 99 (477)
.++|++.+.||+|+||+||+|+++.+|+.||+|++..... .......+.+|+++++++ +|||||++++++.+ ++.+
T Consensus 3 ~edy~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~-~~~~~~~~~~E~~il~~l-~HpnIv~~~~~~~~~~~~~~ 80 (269)
T d2java1 3 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSM-TEAEKQMLVSEVNLLREL-KHPNIVRYYDRIIDRTNTTL 80 (269)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCTTS-CHHHHHHHHHHHHHTTSC-CCTTBCCEEEEEEC----CE
T ss_pred chhCEEeEEEecCCCeEEEEEEECCCCCEEEEEEEChhhC-CHHHHHHHHHHHHHHHHC-CCCCEeeEEEEEEeCCCCEE
Confidence 3679999999999999999999999999999999976543 344567789999999999 79999999999964 5679
Q ss_pred EEEEeccCCCchHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHcC-----CeeccCCCCceeeeecCCCCCEEEee
Q 042823 100 HVVMELCEGGDLFDRIIA----KGYNSERDAATVLRAIVNAVNVCHSMG-----VMHRDLKPENFSFISRDDNALLKVTD 170 (477)
Q Consensus 100 ~lv~e~~~gg~L~~~l~~----~~~~~~~~~~~i~~qil~~L~~lH~~~-----ivH~dlkp~Nil~~~~~~~~~~kl~D 170 (477)
|+|||||+||+|.+++.+ .+.+++..++.++.||+.||.|||+.| |+||||||+|||+ +.++.+||+|
T Consensus 81 ~ivmEy~~~g~L~~~i~~~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~~~~~~IiHrDiKp~NIll---~~~~~vkl~D 157 (269)
T d2java1 81 YIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFL---DGKQNVKLGD 157 (269)
T ss_dssp EEEEECCTTEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHCC---------CCGGGEEE---CTTSCEEECC
T ss_pred EEEEecCCCCcHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCEEeCcCchhhcCc---CCCCcEEEee
Confidence 999999999999999864 467999999999999999999999976 9999999999999 7788999999
Q ss_pred cCCccccCCCc-ceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCC
Q 042823 171 FGSALLFEEGQ-VYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDP 248 (477)
Q Consensus 171 fg~a~~~~~~~-~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~ 248 (477)
||+|....... .....+||+.|+|||++.+ .|+.++|||||||++|+|+||.+||.+.+..+....+..+.... .
T Consensus 158 FG~a~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyel~tg~~Pf~~~~~~~~~~~i~~~~~~~---~ 234 (269)
T d2java1 158 FGLARILNHDTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRR---I 234 (269)
T ss_dssp HHHHHHC-----------CCCSCCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCCC---C
T ss_pred ccceeecccCCCccccCCCCcccCCHHHHcCCCCChHHHHHhhCHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCC---C
Confidence 99998765433 3356789999999999975 68999999999999999999999999988888888888775532 2
Q ss_pred CCCCCHHHHHHHHHhcccCccccCCHHHHhcCccc
Q 042823 249 WPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWL 283 (477)
Q Consensus 249 ~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~ 283 (477)
+..+|+++++||.+||+.||++|||++|+|+|||+
T Consensus 235 ~~~~s~~l~~li~~~L~~dp~~Rps~~ell~hp~i 269 (269)
T d2java1 235 PYRYSDELNEIITRMLNLKDYHRPSVEEILENPLI 269 (269)
T ss_dssp CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTTC
T ss_pred CcccCHHHHHHHHHHcCCChhHCcCHHHHHhCCcC
Confidence 24689999999999999999999999999999996
|
| >d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=2.2e-60 Score=453.57 Aligned_cols=254 Identities=32% Similarity=0.556 Sum_probs=231.1
Q ss_pred ccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 042823 23 LHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVV 102 (477)
Q Consensus 23 ~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~lv 102 (477)
++|++++.||+|+||+||+|+++.+|+.||||++.+...........+.+|+.+++.+ +|||||++++++.+++.+|+|
T Consensus 4 ~dy~i~~~lG~G~fg~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~~~~~~~~~~~~~iv 82 (316)
T d1fota_ 4 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIV-THPFIIRMWGTFQDAQQIFMI 82 (316)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSC-CBTTBCCEEEEEECSSEEEEE
T ss_pred hHeEEEEEEecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHhc-cCcChhheeeeEeeCCeeeeE
Confidence 5799999999999999999999999999999999765433334567788999999999 799999999999999999999
Q ss_pred EeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCCCcc
Q 042823 103 MELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQV 182 (477)
Q Consensus 103 ~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~ 182 (477)
||||+||+|..++.....+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+|......
T Consensus 83 mE~~~gg~l~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~iiHrDiKp~NILl---~~~g~vkL~DFG~a~~~~~~-- 157 (316)
T d1fota_ 83 MDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILL---DKNGHIKITDFGFAKYVPDV-- 157 (316)
T ss_dssp ECCCCSCBHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEE---CTTSCEEECCCSSCEECSSC--
T ss_pred eeecCCccccccccccccccccHHHHHHHHHHHhhhhhccCcEEccccCchheeE---cCCCCEEEecCccceEeccc--
Confidence 9999999999999999999999999999999999999999999999999999999 77889999999999876543
Q ss_pred eecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCCCCHHHHHHHH
Q 042823 183 YRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVR 261 (477)
Q Consensus 183 ~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~ 261 (477)
....+||+.|+|||++.+ .|+.++|||||||++|+|+||.+||.+.+..+....+.++...++ +.+|++++++|.
T Consensus 158 ~~~~~Gt~~Y~APE~l~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~~~~~p----~~~s~~~~~li~ 233 (316)
T d1fota_ 158 TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFP----PFFNEDVKDLLS 233 (316)
T ss_dssp BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHCCCCCC----TTSCHHHHHHHH
T ss_pred cccccCcccccCHHHHcCCCCCchhhccccchhHHHHHhCCCCCCCcCHHHHHHHHHcCCCCCC----CCCCHHHHHHHH
Confidence 345789999999999976 599999999999999999999999999999889999988866543 468999999999
Q ss_pred HhcccCccccC-----CHHHHhcCcccCcC
Q 042823 262 RMLTKDPKRRI-----TAAQVLEHPWLRES 286 (477)
Q Consensus 262 ~~l~~dp~~R~-----s~~~~l~h~~~~~~ 286 (477)
+||.+||.+|+ |++++++||||+..
T Consensus 234 ~~L~~dp~~R~~~~r~t~~~il~Hp~f~~i 263 (316)
T d1fota_ 234 RLITRDLSQRLGNLQNGTEDVKNHPWFKEV 263 (316)
T ss_dssp HHTCSCTTTCTTSSTTTTHHHHTSGGGSSC
T ss_pred HHhhhCHHhccccchhhHHHHHcCcccccC
Confidence 99999999996 99999999999864
|
| >d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.4e-60 Score=457.48 Aligned_cols=261 Identities=25% Similarity=0.334 Sum_probs=218.3
Q ss_pred cccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeE
Q 042823 20 DVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAV 99 (477)
Q Consensus 20 ~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~ 99 (477)
...++|++++.||+|+||+||+|+++.+|+.||+|++.+... ......+.+|+.+++++ +|||||+++++|.++..+
T Consensus 3 l~~d~y~~~~~iG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~--~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~~~ 79 (322)
T d1s9ja_ 3 LKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIK--PAIRNQIIRELQVLHEC-NSPYIVGFYGAFYSDGEI 79 (322)
T ss_dssp CCGGGEEEEEEEECCSSCCEEEEEETTTTEEEEEEEEECCCC--TTHHHHHHHHGGGGGGC-CCTTBCCEEEEEECSSEE
T ss_pred CCccCCEEEEEEecCCCeEEEEEEECCCCcEEEEEEEChhhC--HHHHHHHHHHHHHHHhC-CCCCCCcEEEEEEECCEE
Confidence 346789999999999999999999999999999999976432 33456788999999999 799999999999999999
Q ss_pred EEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH-cCCeeccCCCCceeeeecCCCCCEEEeecCCccccC
Q 042823 100 HVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHS-MGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFE 178 (477)
Q Consensus 100 ~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~-~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~ 178 (477)
|+|||||+||+|.+++.+.+.+++..++.++.|++.||.|||+ +||+||||||+|||+ +.++.+||+|||+|....
T Consensus 80 ~iVmEy~~gg~L~~~l~~~~~l~~~~~~~~~~qil~aL~yLH~~~~IiHRDiKP~NILl---~~~~~vkl~DFGla~~~~ 156 (322)
T d1s9ja_ 80 SICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILV---NSRGEIKLCDFGVSGQLI 156 (322)
T ss_dssp EEEEECCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEE---CTTCCEEECCCCCCHHHH
T ss_pred EEEEEcCCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHhCCEEccccCHHHeeE---CCCCCEEEeeCCCccccC
Confidence 9999999999999999999999999999999999999999997 599999999999999 778899999999998664
Q ss_pred CCcceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHH---cCC-------------
Q 042823 179 EGQVYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAIL---QGE------------- 241 (477)
Q Consensus 179 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~---~~~------------- 241 (477)
+. ...+.+||+.|+|||++.+ .|+.++||||+||++|+|++|+.||.+.+......... .+.
T Consensus 157 ~~-~~~~~~GT~~Y~APEvl~~~~y~~~~DiWSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (322)
T d1s9ja_ 157 DS-MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGR 235 (322)
T ss_dssp HH-TC---CCSSCCCCHHHHHCSCCCTTHHHHHHHHHHHHHHHSSCCSSCCCTTHHHHHC--------------------
T ss_pred CC-ccccccCCccccCchHHcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhcCCcccCCcccccccc
Confidence 32 2345789999999999976 69999999999999999999999998765432211000 000
Q ss_pred ------------------------ccCCCCCCCCCCHHHHHHHHHhcccCccccCCHHHHhcCcccCcCC
Q 042823 242 ------------------------IDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESG 287 (477)
Q Consensus 242 ------------------------~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~~ 287 (477)
...+..+...+|+++++||.+||+.||++|||++|+|+||||++..
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~L~Hpf~~~~~ 305 (322)
T d1s9ja_ 236 PLSSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKRSD 305 (322)
T ss_dssp ----------CCCCHHHHHHHHHTSCCCCCCBTTBCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHHHH
T ss_pred cccccccccccchhHHHHHhhhhccCCccCccccCCHHHHHHHHHHcCCChhHCcCHHHHhhCHhhCcCC
Confidence 0000011123689999999999999999999999999999998654
|
| >d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase activated protein kinase 2, mapkap2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.1e-60 Score=459.58 Aligned_cols=263 Identities=33% Similarity=0.608 Sum_probs=223.5
Q ss_pred cccccccccc-ccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEe--
Q 042823 19 EDVMLHYFFG-RMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYED-- 95 (477)
Q Consensus 19 ~~~~~~Y~~~-~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~-- 95 (477)
..+.++|.+. +.||+|+||+||+|+++.+++.||||++.+. ..+.+|+.++.++.+|||||+++++|++
T Consensus 7 ~~i~~~y~i~~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~--------~~~~~E~~~~~~~~~hpnIv~l~~~~~~~~ 78 (335)
T d2ozaa1 7 NAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC--------PKARREVELHWRASQCPHIVRIVDVYENLY 78 (335)
T ss_dssp SCGGGTEEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECS--------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEE
T ss_pred CCcccCEEEeeEEeeeccCeEEEEEEECCCCCEEEEEEECCc--------HHHHHHHHHHHHhcCCCCCCeEEEEEeecc
Confidence 3456789886 4699999999999999999999999998642 3467899988777689999999999976
Q ss_pred --CCeEEEEEeccCCCchHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeec
Q 042823 96 --ETAVHVVMELCEGGDLFDRIIAK--GYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDF 171 (477)
Q Consensus 96 --~~~~~lv~e~~~gg~L~~~l~~~--~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Df 171 (477)
+..+|+|||||+||+|.+++.+. ..+++.+++.++.||+.||.|||++||+||||||+|||+...+..+.+||+||
T Consensus 79 ~~~~~~~ivmEy~~gg~L~~~i~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~iiHRDiKp~NIll~~~~~~~~~Kl~DF 158 (335)
T d2ozaa1 79 AGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDF 158 (335)
T ss_dssp TTEEEEEEEEECCCSEEHHHHHHSCSCCCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCSSTTCCEEECCC
T ss_pred cCCCEEEEEEECCCCCcHHHHHHhcCCCCcCHHHHHHHHHHHHHHHHHHHHcCCcccccccccccccccccccccccccc
Confidence 46799999999999999999875 36899999999999999999999999999999999999966556788999999
Q ss_pred CCccccCCCcceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHH----HcCCccCCC
Q 042823 172 GSALLFEEGQVYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAI----LQGEIDFDT 246 (477)
Q Consensus 172 g~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i----~~~~~~~~~ 246 (477)
|+|............+||+.|+|||++.+ .|+.++|||||||++|+|+||.+||.+.+.......+ ..+...++.
T Consensus 159 G~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~y~~~~DiwSlGvily~lltg~~Pf~~~~~~~~~~~~~~~i~~~~~~~~~ 238 (335)
T d2ozaa1 159 GFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPN 238 (335)
T ss_dssp TTCEECCCCCCCCCCSCCCSSCCCCCCCGGGGSHHHHHHHHHHHHHHHTTSSCSCEETTCC--------CCCSCSSSCCT
T ss_pred ceeeeccCCCccccccCCcccCCcHHHcCCCCCHHHHHHhhchhHHHHhhCCCCCCCCCHHHHHHHHHHHHhcCCCCCCC
Confidence 99988776666677889999999999875 5999999999999999999999999887655544433 334444555
Q ss_pred CCCCCCCHHHHHHHHHhcccCccccCCHHHHhcCcccCcCCCC
Q 042823 247 DPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEA 289 (477)
Q Consensus 247 ~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~~~~ 289 (477)
+.++.+|+++++||++||++||++|||+.|+|+||||.+....
T Consensus 239 ~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~hp~~~~~~~~ 281 (335)
T d2ozaa1 239 PEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKV 281 (335)
T ss_dssp THHHHSCHHHHHHHHHHSCSSTTTSCCHHHHHHSHHHHTTTSS
T ss_pred cccccCCHHHHHHHHHHccCChhHCcCHHHHHcCHHhhCCCCC
Confidence 5556789999999999999999999999999999999765443
|
| >d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase C, theta type species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.1e-59 Score=449.64 Aligned_cols=257 Identities=27% Similarity=0.455 Sum_probs=227.5
Q ss_pred ccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 042823 23 LHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVV 102 (477)
Q Consensus 23 ~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~lv 102 (477)
++|.+++.||+|+||+||+|+++.+|+.||||++.+...........+.+|..++....+|||||++++++.+++.+|||
T Consensus 2 ddy~i~~~iG~G~fg~Vy~~~~~~t~~~vAvK~i~k~~~~~~~~~~~~~~e~~~l~~~~~hp~Iv~~~~~~~~~~~~yiv 81 (320)
T d1xjda_ 2 EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFV 81 (320)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEE
T ss_pred CCeEEeeEEecCCCcEEEEEEECCCCCEEEEEEEchhhccChHHHHHHHHHHHHHHHhCCCCcEEEEEEEEccCCceeEE
Confidence 68999999999999999999999999999999997643322334456667777766544899999999999999999999
Q ss_pred EeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCCC-c
Q 042823 103 MELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEG-Q 181 (477)
Q Consensus 103 ~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~-~ 181 (477)
||||+||+|.+++...+.+++.+++.++.||+.||.|||++||+||||||+|||+ +..+.+||+|||+|...... .
T Consensus 82 mEy~~~g~L~~~i~~~~~~~e~~~~~~~~qi~~al~ylH~~~iiHrDikp~NiL~---~~~~~~kl~DFG~a~~~~~~~~ 158 (320)
T d1xjda_ 82 MEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILL---DKDGHIKIADFGMCKENMLGDA 158 (320)
T ss_dssp EECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEE---CTTSCEEECCCTTCBCCCCTTC
T ss_pred EeecCCCcHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCcccceee---cCCCceeccccchhhhcccccc
Confidence 9999999999999999999999999999999999999999999999999999999 78889999999999865433 3
Q ss_pred ceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCCCCHHHHHHH
Q 042823 182 VYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLV 260 (477)
Q Consensus 182 ~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li 260 (477)
......||+.|+|||++.+ .|+.++||||+||++|+|+||+.||.+.+.......+..+...++ +.+|+++++||
T Consensus 159 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~~~~~p----~~~s~~~~dli 234 (320)
T d1xjda_ 159 KTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYP----RWLEKEAKDLL 234 (320)
T ss_dssp CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCC----TTSCHHHHHHH
T ss_pred cccccCCCCCcCCHHHHcCCCCCchhhhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCC----ccCCHHHHHHH
Confidence 3445689999999999975 699999999999999999999999999999888888887765443 36899999999
Q ss_pred HHhcccCccccCCHH-HHhcCcccCcC
Q 042823 261 RRMLTKDPKRRITAA-QVLEHPWLRES 286 (477)
Q Consensus 261 ~~~l~~dp~~R~s~~-~~l~h~~~~~~ 286 (477)
.+||++||++|||+. ++++||||+..
T Consensus 235 ~~~L~~dP~~R~s~~~~l~~hpff~~~ 261 (320)
T d1xjda_ 235 VKLFVREPEKRLGVRGDIRQHPLFREI 261 (320)
T ss_dssp HHHSCSSGGGSBTTBSCGGGSGGGTTC
T ss_pred HHhcccCCCCCcCHHHHHHhCchhccC
Confidence 999999999999995 89999999763
|
| >d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=1.1e-59 Score=454.98 Aligned_cols=255 Identities=29% Similarity=0.521 Sum_probs=230.9
Q ss_pred cccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEE
Q 042823 22 MLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHV 101 (477)
Q Consensus 22 ~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~l 101 (477)
.++|++++.||+|+||+||+|+++.+|+.||||++.+...........+.+|+++++.+ +|||||++++++.+...+|+
T Consensus 40 ld~y~i~~~lG~G~fg~Vy~a~~~~~g~~~AvK~i~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~~~~~~~~~~~~~~ 118 (350)
T d1rdqe_ 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVKLEFSFKDNSNLYM 118 (350)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTC-CCTTBCCEEEEEECSSEEEE
T ss_pred ccCeEEEEEeecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHHc-CCCcEeeccccccccccccc
Confidence 47899999999999999999999999999999999764433334456788999999999 79999999999999999999
Q ss_pred EEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCCCc
Q 042823 102 VMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQ 181 (477)
Q Consensus 102 v~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~ 181 (477)
|||||.||+|.+++.+.+.+++.+++.++.||+.||.|||++|||||||||+|||+ +.++.+||+|||+|......
T Consensus 119 v~e~~~~g~l~~~l~~~~~l~e~~~~~i~~qi~~aL~yLH~~~iiHRDIKP~NILl---~~~g~ikL~DFG~a~~~~~~- 194 (350)
T d1rdqe_ 119 VMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKGR- 194 (350)
T ss_dssp EEECCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE---CTTSCEEECCCTTCEECSSC-
T ss_pred ccccccccchhhhHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCcCCHHHccc---CCCCCEEeeeceeeeecccc-
Confidence 99999999999999999999999999999999999999999999999999999999 77889999999999877543
Q ss_pred ceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCCCCHHHHHHH
Q 042823 182 VYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLV 260 (477)
Q Consensus 182 ~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li 260 (477)
.....||+.|||||++.+ .|+.++|||||||++|+|+||.+||.+.+....+..+..+...++ +.+|+++.+||
T Consensus 195 -~~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~~~~~p----~~~s~~~~~li 269 (350)
T d1rdqe_ 195 -TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP----SHFSSDLKDLL 269 (350)
T ss_dssp -BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCC----TTCCHHHHHHH
T ss_pred -cccccCccccCCHHHHcCCCCCccccccchhHHHHHHHhCCCCCCCcCHHHHHHHHhcCCCCCC----ccCCHHHHHHH
Confidence 345689999999999976 589999999999999999999999999988888888888765543 46899999999
Q ss_pred HHhcccCccccC-----CHHHHhcCcccCcC
Q 042823 261 RRMLTKDPKRRI-----TAAQVLEHPWLRES 286 (477)
Q Consensus 261 ~~~l~~dp~~R~-----s~~~~l~h~~~~~~ 286 (477)
++||++||.+|+ |++++++||||+..
T Consensus 270 ~~~L~~dP~kR~~~~r~t~~ell~Hp~f~~~ 300 (350)
T d1rdqe_ 270 RNLLQVDLTKRFGNLKNGVNDIKNHKWFATT 300 (350)
T ss_dssp HHHSCSCTTTCTTSSTTTTHHHHTSGGGTTC
T ss_pred HHHhhhCHHhccccccccHHHHHcCccccCC
Confidence 999999999995 99999999999764
|
| >d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: G-protein coupled receptor kinase 2 species: Cow (Bos taurus) [TaxId: 9913]
Probab=100.00 E-value=3.4e-59 Score=453.86 Aligned_cols=259 Identities=28% Similarity=0.444 Sum_probs=218.4
Q ss_pred cccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHH---HHHHHhccCCCCeeEEEEEEEeCCe
Q 042823 22 MLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRRE---IQIRLYLSGQPNVVEFKSTYEDETA 98 (477)
Q Consensus 22 ~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e---~~~~~~l~~hpniv~~~~~~~~~~~ 98 (477)
.++|++++.||+|+||.||+|+++.+|+.||+|++.+...........+.+| +.++..+ +|||||+++++|.+++.
T Consensus 3 lddy~i~~~lG~G~fg~Vy~~~~~~t~~~vAiK~i~~~~~~~~~~~~~~~~e~~~~~~l~~~-~hpnIv~l~~~~~~~~~ 81 (364)
T d1omwa3 3 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTG-DCPFIVCMSYAFHTPDK 81 (364)
T ss_dssp STTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHHHHSSS-CCTTBCCEEEEEECSSE
T ss_pred HHhCeeeeEEecCCCeEEEEEEECCCCCEEEEEEEchHHcchhhHHHHHHHHHHHHHHHhcC-CCCcEEEEEEEEEECCE
Confidence 3679999999999999999999999999999999875432222222334444 4455455 79999999999999999
Q ss_pred EEEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccC
Q 042823 99 VHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFE 178 (477)
Q Consensus 99 ~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~ 178 (477)
+|+|||||+||+|.+++.+...+++..++.++.||+.||.|||++|||||||||+|||+ +..+.+||+|||+|....
T Consensus 82 ~~ivmE~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~aL~ylH~~~iiHrDlKP~NILl---~~~g~iKl~DFGla~~~~ 158 (364)
T d1omwa3 82 LSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILL---DEHGHVRISDLGLACDFS 158 (364)
T ss_dssp EEEEECCCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE---CSSSCEEECCCTTCEECS
T ss_pred EEEEEEecCCCcHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHCCccceeeccceeEE---cCCCcEEEeeeceeeecC
Confidence 99999999999999999999999999999999999999999999999999999999999 788899999999998775
Q ss_pred CCcceecccccccccchhhhh-h-hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCCCCHHH
Q 042823 179 EGQVYRDIVGSGFYIAPEVLR-R-RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTA 256 (477)
Q Consensus 179 ~~~~~~~~~gt~~y~aPE~~~-~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 256 (477)
... ....+||+.|+|||++. + .|+.++|||||||++|+|+||.+||.+........ +.......+...++.+|+++
T Consensus 159 ~~~-~~~~~GT~~y~APE~~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~-~~~~~~~~~~~~~~~~s~~~ 236 (364)
T d1omwa3 159 KKK-PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHE-IDRMTLTMAVELPDSFSPEL 236 (364)
T ss_dssp SSC-CCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCSSCSSCSSCHHH-HHHHSSSCCCCCCSSSCHHH
T ss_pred CCc-ccccccccccchhHHhhcCCCCCcccchhHHHHHHHHHHhCCCCCCCCCHHHHHH-HHHhcccCCCCCCCCCCHHH
Confidence 543 34568999999999985 3 48999999999999999999999998765544433 22223333333445799999
Q ss_pred HHHHHHhcccCccccCC-----HHHHhcCcccCcC
Q 042823 257 KDLVRRMLTKDPKRRIT-----AAQVLEHPWLRES 286 (477)
Q Consensus 257 ~~li~~~l~~dp~~R~s-----~~~~l~h~~~~~~ 286 (477)
++||.+||++||++||| ++++++||||+..
T Consensus 237 ~~li~~~L~~dP~~R~t~~~~~a~eil~Hp~f~~i 271 (364)
T d1omwa3 237 RSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSL 271 (364)
T ss_dssp HHHHHHHTCSSTTTSTTTSSSTHHHHHTSGGGTTC
T ss_pred HHHHHHHcccCHHHhCCCcccCHHHHHcCccccCC
Confidence 99999999999999999 7999999999864
|
| >d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 7, CDK7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.3e-58 Score=437.14 Aligned_cols=257 Identities=25% Similarity=0.371 Sum_probs=214.6
Q ss_pred ccccccccCCeEEEEEEEccCCceEEEEEeecCCccch--hhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEe
Q 042823 27 FGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRL--AENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVVME 104 (477)
Q Consensus 27 ~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~--~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~lv~e 104 (477)
.++.||+|+||+||+|+++.+|+.||||++........ .....+.+|+.++.++ +|||||++++++.+++++|+|||
T Consensus 2 ~l~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~Ei~il~~l-~hpnIv~~~~~~~~~~~~~ivmE 80 (299)
T d1ua2a_ 2 KLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQEL-SHPNIIGLLDAFGHKSNISLVFD 80 (299)
T ss_dssp EEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHC-CCTTBCCEEEEECCTTCCEEEEE
T ss_pred cceEeccCcCeEEEEEEECCCCcEEEEEEEehhhhhhhhHHHHHHHHHHHHHHHhC-CCCCEeEEEeeeccCCceeehhh
Confidence 35789999999999999999999999999865432211 1134678999999999 79999999999999999999999
Q ss_pred ccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCCC-cce
Q 042823 105 LCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEG-QVY 183 (477)
Q Consensus 105 ~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~-~~~ 183 (477)
||.|+++..+......+++.+++.+++||+.||.|||++||+||||||+|||+ +..+.+||+|||+|...... ...
T Consensus 81 ~~~~~~~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~iiHrDiKp~NIli---~~~~~~KL~DFG~a~~~~~~~~~~ 157 (299)
T d1ua2a_ 81 FMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLL---DENGVLKLADFGLAKSFGSPNRAY 157 (299)
T ss_dssp CCSEEHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE---CTTCCEEECCCGGGSTTTSCCCCC
T ss_pred hhcchHHhhhhhcccCCCHHHHHHHHHHHHHHHHHhhccceecccCCcceEEe---cCCCccccccCccccccCCCcccc
Confidence 99998877666667789999999999999999999999999999999999999 78889999999999876443 334
Q ss_pred ecccccccccchhhhhh--hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCC--------------
Q 042823 184 RDIVGSGFYIAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTD-------------- 247 (477)
Q Consensus 184 ~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~-------------- 247 (477)
...+||+.|+|||++.+ .|+.++||||+||++|+|+||.+||.+.+..+.+..+.+........
T Consensus 158 ~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~ 237 (299)
T d1ua2a_ 158 THQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTF 237 (299)
T ss_dssp CCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTTSSTTCCCC
T ss_pred cceecChhhccHHHHccCCCCChhhhhhhcchHHHHHHhCcCCCCCCCHHHHHHHHHHhcCCCChhhccchhccchhhhh
Confidence 45689999999999863 47999999999999999999999999988888777765421111100
Q ss_pred ----------CCCCCCHHHHHHHHHhcccCccccCCHHHHhcCcccCcCC
Q 042823 248 ----------PWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESG 287 (477)
Q Consensus 248 ----------~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~~ 287 (477)
.++.+|+++++||.+||+.||++|||+.|+|+||||++..
T Consensus 238 ~~~~~~~~~~~~~~~s~~~~dll~~~L~~dP~~R~sa~e~L~Hp~f~~~p 287 (299)
T d1ua2a_ 238 KSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFSNRP 287 (299)
T ss_dssp CCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTSGGGTSSS
T ss_pred ccCCCCChHHhcccCCHHHHHHHHHHccCChhhCcCHHHHhCCHhhCCCC
Confidence 0235789999999999999999999999999999998654
|
| >d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Proto-oncogene serine/threonine-protein kinase Pim-1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.5e-58 Score=429.09 Aligned_cols=253 Identities=32% Similarity=0.547 Sum_probs=215.6
Q ss_pred ccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccch---hhHHHHHHHHHHHHhcc-CCCCeeEEEEEEEeC
Q 042823 21 VMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRL---AENDMIRREIQIRLYLS-GQPNVVEFKSTYEDE 96 (477)
Q Consensus 21 ~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~---~~~~~~~~e~~~~~~l~-~hpniv~~~~~~~~~ 96 (477)
+.++|++++.||+|+||+||+|+++.+|+.||||++.+...... .....+.+|+.+++++. .|||||++++++.++
T Consensus 2 l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~~~h~nIv~~~~~~~~~ 81 (273)
T d1xwsa_ 2 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERP 81 (273)
T ss_dssp CTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECS
T ss_pred CCCeEEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccchhhhhHHHHHHHHHHHHHHhccCCCCccEEEEEEeeC
Confidence 57899999999999999999999999999999999976432211 11233568999999884 499999999999999
Q ss_pred CeEEEEEeccCC-CchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCcc
Q 042823 97 TAVHVVMELCEG-GDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSAL 175 (477)
Q Consensus 97 ~~~~lv~e~~~g-g~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~ 175 (477)
+.+|+||||+.+ +++.+++...+.+++.+++.++.||+.||.|||++||+||||||+|||+. .+.+.+||+|||+|.
T Consensus 82 ~~~~lv~e~~~~~~~l~~~~~~~~~l~e~~~~~~~~qi~~al~~lH~~~iiHrDiKp~NIll~--~~~~~vkl~DFG~a~ 159 (273)
T d1xwsa_ 82 DSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILID--LNRGELKLIDFGSGA 159 (273)
T ss_dssp SEEEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEE--TTTTEEEECCCTTCE
T ss_pred CeEEEEEEeccCcchHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCccccCcccceEEe--cCCCeEEECccccce
Confidence 999999999986 68888998889999999999999999999999999999999999999982 245789999999998
Q ss_pred ccCCCcceecccccccccchhhhhh-h-cCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCCCC
Q 042823 176 LFEEGQVYRDIVGSGFYIAPEVLRR-R-YGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPSIS 253 (477)
Q Consensus 176 ~~~~~~~~~~~~gt~~y~aPE~~~~-~-~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 253 (477)
..... ......||+.|+|||++.+ . ++.++||||+||++|+|+||.+||.+. ..+.++...++ +.+|
T Consensus 160 ~~~~~-~~~~~~GT~~y~aPE~~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~------~~i~~~~~~~~----~~~s 228 (273)
T d1xwsa_ 160 LLKDT-VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIRGQVFFR----QRVS 228 (273)
T ss_dssp ECCSS-CBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSH------HHHHHCCCCCS----SCCC
T ss_pred ecccc-cccccccCCCcCCHHHHcCCCCCCcccccccceeeehhHhhCCCCCCCc------hHHhhcccCCC----CCCC
Confidence 65443 3456789999999999875 3 467899999999999999999999653 23455544433 4689
Q ss_pred HHHHHHHHHhcccCccccCCHHHHhcCcccCcC
Q 042823 254 STAKDLVRRMLTKDPKRRITAAQVLEHPWLRES 286 (477)
Q Consensus 254 ~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~ 286 (477)
+++++||.+||+.||++|||++|+|+||||++.
T Consensus 229 ~~~~~li~~~L~~dp~~R~s~~eil~hp~~~~~ 261 (273)
T d1xwsa_ 229 SECQHLIRWCLALRPSDRPTFEEIQNHPWMQDV 261 (273)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSSC
T ss_pred HHHHHHHHHHccCCHhHCcCHHHHhcCHhhCCC
Confidence 999999999999999999999999999999864
|
| >d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Mycobacterial protein kinase PknB, catalytic domain species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=100.00 E-value=1.1e-57 Score=428.55 Aligned_cols=261 Identities=26% Similarity=0.374 Sum_probs=221.4
Q ss_pred cccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCC--
Q 042823 20 DVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDET-- 97 (477)
Q Consensus 20 ~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~-- 97 (477)
.+.++|++.+.||+|+||+||+|.++.+|+.||||++.+...........+.+|++++..+ +|||||++++++....
T Consensus 4 ~l~drY~i~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~~l~~~-~hpniv~~~~~~~~~~~~ 82 (277)
T d1o6ya_ 4 HLSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAAL-NHPAIVAVYDTGEAETPA 82 (277)
T ss_dssp EETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTTTCHHHHHHHHHHHHHHHTC-CCTTBCCEEEEEEEECSS
T ss_pred CccceeEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhc-CCCCCCcccceeeeccCC
Confidence 4678999999999999999999999999999999999876555555667889999999998 7999999999997653
Q ss_pred --eEEEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCcc
Q 042823 98 --AVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSAL 175 (477)
Q Consensus 98 --~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~ 175 (477)
.+|+|||||+||+|.+++...+.+++.+++.++.||+.||.|||++||+||||||+|||+ +..+.++|+|||.+.
T Consensus 83 ~~~~~lvmE~~~g~~L~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~iiHrDiKP~NIll---~~~~~~~l~d~~~~~ 159 (277)
T d1o6ya_ 83 GPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMI---SATNAVKVMDFGIAR 159 (277)
T ss_dssp SEEEEEEEECCCEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE---ETTSCEEECCCTTCE
T ss_pred CceEEEEEECCCCCEehhhhcccCCCCHHHHHHHHHHHHHHHHHHHhCCccCccccCccccc---Cccccceeehhhhhh
Confidence 489999999999999999999999999999999999999999999999999999999999 677889999999887
Q ss_pred ccCCC----cceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCC
Q 042823 176 LFEEG----QVYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWP 250 (477)
Q Consensus 176 ~~~~~----~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~ 250 (477)
..... ......+||+.|+|||++.+ .|+.++||||+||++|+|+||.+||.+.+..+....+.......+...++
T Consensus 160 ~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (277)
T d1o6ya_ 160 AIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHE 239 (277)
T ss_dssp ECC----------------TTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCCCCCGGGTSS
T ss_pred hhccccccccccccccCcccccCHHHHcCCCCCcceecccchHHHHHHHhCCCCCCCcCHHHHHHHHHhcCCCCCchhcc
Confidence 54332 22345689999999999976 58999999999999999999999999988888888887776665555667
Q ss_pred CCCHHHHHHHHHhcccCccccCCHHHHhcCcccC
Q 042823 251 SISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLR 284 (477)
Q Consensus 251 ~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~ 284 (477)
.+|+++.+||.+||++||.+||+..+.+.|+|.+
T Consensus 240 ~~s~~l~~li~~~L~~dp~~R~~sa~~l~~~l~r 273 (277)
T d1o6ya_ 240 GLSADLDAVVLKALAKNPENRYQTAAEMRADLVR 273 (277)
T ss_dssp SCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHccCCHhHCHhHHHHHHHHHHH
Confidence 8999999999999999999999555555566653
|
| >d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.9e-57 Score=427.94 Aligned_cols=261 Identities=26% Similarity=0.392 Sum_probs=216.4
Q ss_pred cccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEE
Q 042823 22 MLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHV 101 (477)
Q Consensus 22 ~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~l 101 (477)
.++|++++.||+|+||+||+|+++.+|+.||+|++..... .......+.+|+++++++ +|||||++++++.++..+|+
T Consensus 1 ~d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~-~~~~~~~~~~Ei~il~~l-~Hp~Iv~~~~~~~~~~~~~i 78 (298)
T d1gz8a_ 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTE-TEGVPSTAIREISLLKEL-NHPNIVKLLDVIHTENKLYL 78 (298)
T ss_dssp CTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEC--------CCHHHHHHHHHHTTC-CCTTBCCEEEEEEETTEEEE
T ss_pred CCCCEeccEEecCcCeEEEEEEECCCCCEEEEEEEehhhc-ChHHHHHHHHHHHHHHhC-CCCcEEEeccccccccceeE
Confidence 3689999999999999999999999999999999965432 223356788999999999 79999999999999999999
Q ss_pred EEeccCCCchHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCC
Q 042823 102 VMELCEGGDLFDRIIA--KGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEE 179 (477)
Q Consensus 102 v~e~~~gg~L~~~l~~--~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~ 179 (477)
|||||.|+ +.+++.. .+.+++.+++.++.||+.||.|||++|||||||||+|||+ +.++.+||+|||.|.....
T Consensus 79 v~e~~~~~-~~~~~~~~~~~~l~e~~~~~~~~qil~~L~yLH~~~IiHrDiKpeNIl~---~~~~~~kl~DFG~a~~~~~ 154 (298)
T d1gz8a_ 79 VFEFLHQD-LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI---NTEGAIKLADFGLARAFGV 154 (298)
T ss_dssp EEECCSEE-HHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE---CTTSCEEECSTTHHHHHCC
T ss_pred EEeecCCc-hhhhhhhhcccCCCHHHHHHHHHHHHHHHHHhhcCCEEccccCchheee---cccCcceeccCCcceeccC
Confidence 99999764 4455543 4568999999999999999999999999999999999999 7788999999999977643
Q ss_pred C-cceecccccccccchhhhhh--hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCC---------
Q 042823 180 G-QVYRDIVGSGFYIAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTD--------- 247 (477)
Q Consensus 180 ~-~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~--------- 247 (477)
. .......||+.|+|||++.. .++.++||||+||++|+|++|++||.+.+.......+.+........
T Consensus 155 ~~~~~~~~~gt~~y~apE~~~~~~~~~~~~DiwSlGvily~m~~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 234 (298)
T d1gz8a_ 155 PVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMP 234 (298)
T ss_dssp CSBCTTCCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGST
T ss_pred CcccceeecccceeeehhhhccccCCCccccccccchhhhHHhhCCCCCCCCCHHHHHHHHHHhcCCCchhhcccccccc
Confidence 3 33445689999999998764 36889999999999999999999999888777766654321111110
Q ss_pred ----------------CCCCCCHHHHHHHHHhcccCccccCCHHHHhcCcccCcCCC
Q 042823 248 ----------------PWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGE 288 (477)
Q Consensus 248 ----------------~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~~~ 288 (477)
.++.+|+++++||++||..||++|||++|+|+||||++...
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~t~~ell~H~ff~~~~~ 291 (298)
T d1gz8a_ 235 DYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 291 (298)
T ss_dssp TCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGTTCCC
T ss_pred ccccccccccccchhhhccCCCHHHHHHHHHHccCChhHCcCHHHHhCCHhhccCCC
Confidence 12357899999999999999999999999999999987543
|
| >d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK6 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3e-56 Score=425.28 Aligned_cols=265 Identities=24% Similarity=0.333 Sum_probs=216.8
Q ss_pred ccccccccccccccCCeEEEEEEEccC-CceEEEEEeecCCccchhhHHHHHHHHHHHHhcc--CCCCeeEEEEEEEe--
Q 042823 21 VMLHYFFGRMLGRGQFGVSYLCTENST-NRPYACKSIAKKPKMRLAENDMIRREIQIRLYLS--GQPNVVEFKSTYED-- 95 (477)
Q Consensus 21 ~~~~Y~~~~~iG~G~~g~V~~~~~~~~-~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~--~hpniv~~~~~~~~-- 95 (477)
..++|++++.||+|+||+||+|++..+ ++.||||++....... .......+|+.+++.|. +||||++++++|..
T Consensus 5 ~~~~Y~i~~~LG~G~fg~V~~a~~~~~~~~~vAiK~i~~~~~~~-~~~~~~~~E~~~l~~l~~~~HpnIv~~~~~~~~~~ 83 (305)
T d1blxa_ 5 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEE-GMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSR 83 (305)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTT-SCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEE
T ss_pred CcCCEEEEEEEecccCeEEEEEEEECCCCEEEEEEEEehhhccc-hHHHHHHHHHHHHHHHhhcCCCCcceeeeeecccc
Confidence 357999999999999999999999765 6679999986543221 12233557777776664 79999999999853
Q ss_pred ---CCeEEEEEeccCCCchHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeec
Q 042823 96 ---ETAVHVVMELCEGGDLFDRIIA-KGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDF 171 (477)
Q Consensus 96 ---~~~~~lv~e~~~gg~L~~~l~~-~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Df 171 (477)
...+|++||||.|+++...... ...+++..++.++.|++.||.|||++||+||||||+|||+ +..+.+||+||
T Consensus 84 ~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~ivHrDiKp~NILi---~~~~~~kl~df 160 (305)
T d1blxa_ 84 TDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILV---TSSGQIKLADF 160 (305)
T ss_dssp CSSEEEEEEEEECCSCBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE---CTTCCEEECSC
T ss_pred cccCceEEEEEEeccCCchhhhhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEEecCCCccEEEE---cCCCCeeecch
Confidence 3578999999998776544333 4568999999999999999999999999999999999999 77889999999
Q ss_pred CCccccCCCcceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCcc-----CC
Q 042823 172 GSALLFEEGQVYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEID-----FD 245 (477)
Q Consensus 172 g~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~-----~~ 245 (477)
|++.............||+.|+|||++.+ .|+.++||||+||++|+|+||++||.+.+..+.+..+...... ++
T Consensus 161 g~~~~~~~~~~~~~~~gT~~Y~APE~~~~~~y~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~ 240 (305)
T d1blxa_ 161 GLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWP 240 (305)
T ss_dssp CSCCCCCGGGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGGSC
T ss_pred hhhhhhcccccCCCcccChhhcCcchhcCCCCChhehhhchHHHHHHHHHCCCCCCCCCHHHHHHHHHHhhCCCchhccc
Confidence 99987766666677899999999999864 6999999999999999999999999998887777766532110 00
Q ss_pred ------------------CCCCCCCCHHHHHHHHHhcccCccccCCHHHHhcCcccCcCCCC
Q 042823 246 ------------------TDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGEA 289 (477)
Q Consensus 246 ------------------~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~~~~ 289 (477)
...++.+|+.+++||.+||++||++|||+.|+|+||||++....
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~sa~e~L~Hpff~~i~~~ 302 (305)
T d1blxa_ 241 RDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQDLERC 302 (305)
T ss_dssp TTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGTTCCCC
T ss_pred ccccchhhhhccccccchhhccccCCHHHHHHHHHHCcCChhHCcCHHHHhcChhhcCchhh
Confidence 01234578999999999999999999999999999999876543
|
| >d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: (Plasmodium falciparum) [TaxId: 5833]
Probab=100.00 E-value=3.8e-56 Score=420.35 Aligned_cols=258 Identities=29% Similarity=0.424 Sum_probs=216.2
Q ss_pred cccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEE
Q 042823 22 MLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHV 101 (477)
Q Consensus 22 ~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~l 101 (477)
.++|+++++||+|+||+||+|+++ +|+.||||++..... .......+.+|+.+++++ +|||||++++++.+++..|+
T Consensus 1 ~~~Y~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~i~~~~~-~~~~~~~~~~E~~il~~l-~hpnIv~~~~~~~~~~~~~i 77 (286)
T d1ob3a_ 1 MEKYHGLEKIGEGTYGVVYKAQNN-YGETFALKKIRLEKE-DEGIPSTTIREISILKEL-KHSNIVKLYDVIHTKKRLVL 77 (286)
T ss_dssp CCSEEEEEEEEEETTEEEEEEEET-TSCEEEEEEECCSSG-GGCCCHHHHHHHHGGGGC-CCTTBCCEEEEEECSSCEEE
T ss_pred CCCceeccEEecCCCcEEEEEEeC-CCCEEEEEEEehhhc-ChHHHHHHHHHHHHHHhC-CCCcEEeeeeecccCCceeE
Confidence 369999999999999999999985 789999999965432 233456788999999999 79999999999999999999
Q ss_pred EEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCCC-
Q 042823 102 VMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEG- 180 (477)
Q Consensus 102 v~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~- 180 (477)
+|||+.++.+..+....+.+++..+..++.||+.||+|||++|||||||||+|||+ +.++.+||+|||.|......
T Consensus 78 ~~e~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~IvHrDiKp~NIll---~~~~~~kl~DfG~a~~~~~~~ 154 (286)
T d1ob3a_ 78 VFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLI---NREGELKIADFGLARAFGIPV 154 (286)
T ss_dssp EEECCSEEHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE---CTTSCEEECCTTHHHHHCC--
T ss_pred EEEeehhhhHHHHHhhcCCcchhhhHHHHHHHHHHHHHhccCcEEecCCCCceeeE---cCCCCEEecccccceecccCc
Confidence 99999987777776667889999999999999999999999999999999999999 77889999999999876443
Q ss_pred cceecccccccccchhhhhh--hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCC------------
Q 042823 181 QVYRDIVGSGFYIAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDT------------ 246 (477)
Q Consensus 181 ~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~------------ 246 (477)
.......|++.|+|||++.+ .++.++||||+||++|+|++|++||.+.+..+....+.........
T Consensus 155 ~~~~~~~~~~~y~~pE~~~~~~~~~~~~DiwslGv~l~el~~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 234 (286)
T d1ob3a_ 155 RKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKY 234 (286)
T ss_dssp -------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTC
T ss_pred cccceecccchhhhHHHHhCCCCCCcceeehhcCcHHHHHHHCCCCCCCCCHHHHHHHHHHhhCCCChhhccchhhhhhc
Confidence 23345579999999999864 4799999999999999999999999988777776665432111100
Q ss_pred -------------CCCCCCCHHHHHHHHHhcccCccccCCHHHHhcCcccCc
Q 042823 247 -------------DPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRE 285 (477)
Q Consensus 247 -------------~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~ 285 (477)
...+.+|+.+++||++||++||++|||+.|+|+||||++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~ell~Hp~f~~ 286 (286)
T d1ob3a_ 235 DPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKE 286 (286)
T ss_dssp CTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGGC
T ss_pred ccccccccCcchhhhcccCCHHHHHHHHHHccCChhHCcCHHHHhcCcccCc
Confidence 112457899999999999999999999999999999974
|
| >d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Abelsone tyrosine kinase (abl) species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=1.2e-55 Score=415.57 Aligned_cols=253 Identities=20% Similarity=0.259 Sum_probs=214.9
Q ss_pred cccccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEe
Q 042823 16 KAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYED 95 (477)
Q Consensus 16 ~~~~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~ 95 (477)
..|+...++|++.+.||+|+||+||+|+++.+++.||||++.... ...+.+.+|++++.++ +|||||++++++.+
T Consensus 10 ~~wei~~~~~~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~----~~~~~~~~E~~il~~l-~HpnIv~~~~~~~~ 84 (287)
T d1opja_ 10 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT----MEVEEFLKEAAVMKEI-KHPNLVQLLGVCTR 84 (287)
T ss_dssp CTTBCCGGGEEEEEETTTTTTSSEEEEEEGGGTEEEEEEECCTTC----SCHHHHHHHHHHHHHC-CCTTBCCEEEEECS
T ss_pred cccEecHHHeEEeeEEeeCCCeEEEEEEECCCCeEEEEEEECCcc----chHHHHHHHHHHHHhC-CCCCEecCCccEee
Confidence 356667789999999999999999999999999999999986543 2346788999999999 79999999999999
Q ss_pred CCeEEEEEeccCCCchHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCC
Q 042823 96 ETAVHVVMELCEGGDLFDRIIAK--GYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGS 173 (477)
Q Consensus 96 ~~~~~lv~e~~~gg~L~~~l~~~--~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~ 173 (477)
++.+|+|||||++|+|.+++... ..+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+
T Consensus 85 ~~~~~iv~E~~~~g~l~~~l~~~~~~~~~~~~~~~i~~qi~~gL~yLH~~~iiHrDlKp~NILl---~~~~~~Kl~DFG~ 161 (287)
T d1opja_ 85 EPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLV---GENHLVKVADFGL 161 (287)
T ss_dssp SSSCEEEEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE---CGGGCEEECCCCC
T ss_pred CCeeEEEeecccCcchHHHhhhccccchHHHHHHHHHHHHHHHHHHHHHCCcccCccccCeEEE---CCCCcEEEccccc
Confidence 99999999999999999999764 568999999999999999999999999999999999999 7778999999999
Q ss_pred ccccCCCcc--eecccccccccchhhhh-hhcCCccchHhHHHHHHHHhhCCCCCCC-CChhhHHHHHHcCCccCCCCCC
Q 042823 174 ALLFEEGQV--YRDIVGSGFYIAPEVLR-RRYGKEIDIWSAGVILYILLSGVPPFWA-ETKKGTYDAILQGEIDFDTDPW 249 (477)
Q Consensus 174 a~~~~~~~~--~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~l~tg~~pf~~-~~~~~~~~~i~~~~~~~~~~~~ 249 (477)
|+....... .....||+.|+|||++. +.|+.++|||||||++|+|++|..||.. .+.......+..+ .. .+..
T Consensus 162 a~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~k~DiwS~Gv~l~ell~~~~p~~~~~~~~~~~~~i~~~-~~--~~~~ 238 (287)
T d1opja_ 162 SRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKD-YR--MERP 238 (287)
T ss_dssp TTTCCSSSSEEETTEEECGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTT-CC--CCCC
T ss_pred eeecCCCCceeeccccccccccChHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCcchHHHHHHHHhcC-CC--CCCC
Confidence 987654332 23346889999999986 4699999999999999999996666544 4444444444443 22 2233
Q ss_pred CCCCHHHHHHHHHhcccCccccCCHHHHhc
Q 042823 250 PSISSTAKDLVRRMLTKDPKRRITAAQVLE 279 (477)
Q Consensus 250 ~~~~~~~~~li~~~l~~dp~~R~s~~~~l~ 279 (477)
+.+|+++++||.+||+.||++|||+.++++
T Consensus 239 ~~~~~~l~~li~~cl~~dP~~Rps~~ei~~ 268 (287)
T d1opja_ 239 EGCPEKVYELMRACWQWNPSDRPSFAEIHQ 268 (287)
T ss_dssp TTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred ccchHHHHHHHHHHcCCCHhHCcCHHHHHH
Confidence 578999999999999999999999999975
|
| >d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fl cytokine receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=9.7e-56 Score=424.15 Aligned_cols=257 Identities=20% Similarity=0.305 Sum_probs=215.8
Q ss_pred ccccccccccccccccccCCeEEEEEEEccCCc-----eEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEE
Q 042823 17 AYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNR-----PYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKS 91 (477)
Q Consensus 17 ~~~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~-----~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~ 91 (477)
.|+...++|++++.||+|+||+||+|++..+++ .||+|.+..... ......+.+|+.++.++.+|||||++++
T Consensus 31 kwei~~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~~HpnIv~l~~ 108 (325)
T d1rjba_ 31 KWEFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKAD--SSEREALMSELKMMTQLGSHENIVNLLG 108 (325)
T ss_dssp GGBCCGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC--------CHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred cccCCHHHeEEeeEEeeCCCeEEEEEEEcCCCcccceeEEEEEEeccccC--HHHHHHHHHHHHHHHHhcCCCcEeEEEE
Confidence 344556889999999999999999999876554 689998865432 2344568899999999878999999999
Q ss_pred EEEeCCeEEEEEeccCCCchHHHHHHcC-----------------------CCCHHHHHHHHHHHHHHHHHHHHcCCeec
Q 042823 92 TYEDETAVHVVMELCEGGDLFDRIIAKG-----------------------YNSERDAATVLRAIVNAVNVCHSMGVMHR 148 (477)
Q Consensus 92 ~~~~~~~~~lv~e~~~gg~L~~~l~~~~-----------------------~~~~~~~~~i~~qil~~L~~lH~~~ivH~ 148 (477)
++.+.+.+|+|||||+||+|.+++.... .+++..+..++.||+.||.|||++|||||
T Consensus 109 ~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~IiHR 188 (325)
T d1rjba_ 109 ACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHR 188 (325)
T ss_dssp EECSSSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTTEEET
T ss_pred EEeeCCeEEEEEEcCCCCcHHHHHHhccCCCcchhhhhccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeec
Confidence 9999999999999999999999997642 47899999999999999999999999999
Q ss_pred cCCCCceeeeecCCCCCEEEeecCCccccCCCcc---eecccccccccchhhhh-hhcCCccchHhHHHHHHHHhh-CCC
Q 042823 149 DLKPENFSFISRDDNALLKVTDFGSALLFEEGQV---YRDIVGSGFYIAPEVLR-RRYGKEIDIWSAGVILYILLS-GVP 223 (477)
Q Consensus 149 dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~l~t-g~~ 223 (477)
||||+||++ +.++.+||+|||+|+....... .....||+.|||||++. +.|+.++|||||||++|||+| |.+
T Consensus 189 DlKp~Nill---~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DiwS~Gvil~emlt~g~~ 265 (325)
T d1rjba_ 189 DLAARNVLV---THGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVN 265 (325)
T ss_dssp TCSGGGEEE---ETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCC
T ss_pred cCchhcccc---ccCCeEEEeeccccccccCCCceeeeccccCCCccCChHHHcCCCCCcceeccchhHHHHHHHhCCCC
Confidence 999999998 6788999999999986544322 23456899999999986 568999999999999999998 899
Q ss_pred CCCCCChhhHHHHHHcCCccCCCCCCCCCCHHHHHHHHHhcccCccccCCHHHHhcC
Q 042823 224 PFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEH 280 (477)
Q Consensus 224 pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h 280 (477)
||.+.+....+..+.......+. .+.+|+++++||.+||+.||++|||++++++|
T Consensus 266 Pf~~~~~~~~~~~~~~~~~~~~~--p~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~ 320 (325)
T d1rjba_ 266 PYPGIPVDANFYKLIQNGFKMDQ--PFYATEEIYIIMQSCWAFDSRKRPSFPNLTSF 320 (325)
T ss_dssp SSTTCCCSHHHHHHHHTTCCCCC--CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred CCCCCCHHHHHHHHHhcCCCCCC--CCcCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence 99887776666666665544332 35689999999999999999999999999876
|
| >d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: B-Raf kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.1e-55 Score=413.20 Aligned_cols=254 Identities=21% Similarity=0.339 Sum_probs=208.5
Q ss_pred cccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCC
Q 042823 18 YEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDET 97 (477)
Q Consensus 18 ~~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~ 97 (477)
|+...++|.+++.||+|+||+||+|+++ ..||||++..... .......+.+|+.++.++ +|||||++++++. .+
T Consensus 3 wei~~~~~~~~~~lG~G~fg~Vy~~~~~---~~vAvK~~~~~~~-~~~~~~~~~~E~~~l~~l-~HpnIv~~~~~~~-~~ 76 (276)
T d1uwha_ 3 WEIPDGQITVGQRIGSGSFGTVYKGKWH---GDVAVKMLNVTAP-TPQQLQAFKNEVGVLRKT-RHVNILLFMGYST-AP 76 (276)
T ss_dssp CBCCTTCCCCCSEEEECSSCEEEEEESS---SEEEEEECCCSSC-CTTHHHHHHHHHHHHTTC-CCTTBCCEEEEEC-SS
T ss_pred cccccccEEEEEEEeeCCCcEEEEEEEC---CEEEEEEEEcccC-CHHHHHHHHHHHHHHHhC-CCCCEeeeeEEEe-cc
Confidence 4556789999999999999999999753 4699999865433 334567889999999999 7999999999865 45
Q ss_pred eEEEEEeccCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccc
Q 042823 98 AVHVVMELCEGGDLFDRIIAK-GYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALL 176 (477)
Q Consensus 98 ~~~lv~e~~~gg~L~~~l~~~-~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~ 176 (477)
.+|+|||||+||+|.+++... +.+++..+..++.||+.||.|||++|||||||||+|||+ +.++.+||+|||+|..
T Consensus 77 ~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~gl~yLH~~~ivHrDlKp~NiLl---~~~~~~Kl~DFGla~~ 153 (276)
T d1uwha_ 77 QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFL---HEDLTVKIGDFGLATV 153 (276)
T ss_dssp SCEEEEECCCEEEHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE---ETTSSEEECCCCCSCC
T ss_pred EEEEEEecCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHhcCCEeccccCHHHEEE---cCCCCEEEccccceee
Confidence 689999999999999999764 569999999999999999999999999999999999999 6788999999999977
Q ss_pred cCCC---cceecccccccccchhhhhh----hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHH-cCCccC-CCC
Q 042823 177 FEEG---QVYRDIVGSGFYIAPEVLRR----RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAIL-QGEIDF-DTD 247 (477)
Q Consensus 177 ~~~~---~~~~~~~gt~~y~aPE~~~~----~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~-~~~~~~-~~~ 247 (477)
.... .......||+.|||||++.+ .|+.++|||||||++|||+||..||.+.+.......+. ++.... ...
T Consensus 154 ~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~~sDiwS~Gv~l~el~tg~~Pf~~~~~~~~~~~~~~~~~~~p~~~~ 233 (276)
T d1uwha_ 154 KSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSK 233 (276)
T ss_dssp ------------CCCCGGGCCHHHHTTCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHHTSCCCCGGG
T ss_pred ccccCCcccccccccCcccCCHHHHhcccCCCCCchhhhhhhHHHHHHHHHCCCCCCCCChHHHHHHHHhcCCCCCcchh
Confidence 6432 22345689999999999853 47899999999999999999999998876655544443 332221 122
Q ss_pred CCCCCCHHHHHHHHHhcccCccccCCHHHHhcC
Q 042823 248 PWPSISSTAKDLVRRMLTKDPKRRITAAQVLEH 280 (477)
Q Consensus 248 ~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h 280 (477)
..+.+|+++.+||.+||+.||++|||+.+++++
T Consensus 234 ~~~~~~~~l~~li~~cl~~dp~~RPt~~~il~~ 266 (276)
T d1uwha_ 234 VRSNCPKAMKRLMAECLKKKRDERPLFPQILAS 266 (276)
T ss_dssp SCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred ccccchHHHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence 345789999999999999999999999999875
|
| >d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Lymphocyte kinase (lck) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.5e-55 Score=410.55 Aligned_cols=261 Identities=20% Similarity=0.259 Sum_probs=219.8
Q ss_pred CccccccccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEE
Q 042823 12 PILGKAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKS 91 (477)
Q Consensus 12 ~~~~~~~~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~ 91 (477)
|.....++...++|++++.||+|+||+||+|.++ +++.||||++.... ...+.+.+|+.++.++ +|||||++++
T Consensus 2 p~~~~~wei~~~~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~----~~~~~~~~E~~~l~~l-~HpnIv~~~g 75 (272)
T d1qpca_ 2 PWWEDEWEVPRETLKLVERLGAGQFGEVWMGYYN-GHTKVAVKSLKQGS----MSPDAFLAEANLMKQL-QHQRLVRLYA 75 (272)
T ss_dssp CTTTCTTBCCGGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTTS----SCHHHHHHHHHHHHHC-CCTTBCCEEE
T ss_pred CCCCCCeecCHHHeEEeEEEecCCCcEEEEEEEC-CCCEEEEEEEccCc----CCHHHHHHHHHHHHhC-CCCCEeEEEe
Confidence 3345667777889999999999999999999985 57889999986543 2346789999999999 7999999999
Q ss_pred EEEeCCeEEEEEeccCCCchHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEe
Q 042823 92 TYEDETAVHVVMELCEGGDLFDRIIAK--GYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVT 169 (477)
Q Consensus 92 ~~~~~~~~~lv~e~~~gg~L~~~l~~~--~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~ 169 (477)
++.+ +.+|+|||||++|+|.+++... ..+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+
T Consensus 76 ~~~~-~~~~iv~Ey~~~g~L~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~lH~~~ivHrDiKp~NIll---~~~~~~Kl~ 151 (272)
T d1qpca_ 76 VVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILV---SDTLSCKIA 151 (272)
T ss_dssp EECS-SSCEEEEECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE---CTTSCEEEC
T ss_pred eecc-CCeEEEEEeCCCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCccchhheee---ecccceeec
Confidence 8754 5679999999999999877543 358999999999999999999999999999999999999 788999999
Q ss_pred ecCCccccCCCcc--eecccccccccchhhhh-hhcCCccchHhHHHHHHHHhh-CCCCCCCCChhhHHHHHHcCCccCC
Q 042823 170 DFGSALLFEEGQV--YRDIVGSGFYIAPEVLR-RRYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQGEIDFD 245 (477)
Q Consensus 170 Dfg~a~~~~~~~~--~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~l~t-g~~pf~~~~~~~~~~~i~~~~~~~~ 245 (477)
|||+|+....... .....||+.|+|||++. +.|+.++|||||||++|||+| |.+||...+..+....+..+....
T Consensus 152 DFGla~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwS~Gvvl~ellt~~~~~~~~~~~~~~~~~i~~~~~~~- 230 (272)
T d1qpca_ 152 DFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMV- 230 (272)
T ss_dssp CCTTCEECSSSCEECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCC-
T ss_pred cccceEEccCCccccccccCCcccccChHHHhCCCCCchhhhhhhHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCCC-
Confidence 9999987755432 23457899999999987 469999999999999999999 566666667777777777654322
Q ss_pred CCCCCCCCHHHHHHHHHhcccCccccCCHHHHhc--CcccCc
Q 042823 246 TDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLE--HPWLRE 285 (477)
Q Consensus 246 ~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~--h~~~~~ 285 (477)
..+.+|+++.+|+.+||+.||++|||+.++++ |+||..
T Consensus 231 --~p~~~~~~l~~li~~cl~~~P~~Rpt~~ei~~~L~~~fts 270 (272)
T d1qpca_ 231 --RPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTA 270 (272)
T ss_dssp --CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred --CcccChHHHHHHHHHHcCCCHhHCcCHHHHHHHhhhhhhc
Confidence 22468999999999999999999999999988 777753
|
| >d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Glycogen synthase kinase-3 beta (Gsk3b) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.1e-54 Score=421.64 Aligned_cols=255 Identities=27% Similarity=0.403 Sum_probs=212.2
Q ss_pred cccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEe------
Q 042823 22 MLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYED------ 95 (477)
Q Consensus 22 ~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~------ 95 (477)
.-+|..+++||+|+||+||+|+++.+|+.||||++.+.... ..+|+.+++++ +||||++++++|..
T Consensus 19 ~~~Y~~~k~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~-------~~~Ei~il~~l-~h~niv~~~~~~~~~~~~~~ 90 (350)
T d1q5ka_ 19 EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRF-------KNRELQIMRKL-DHCNIVRLRYFFYSSGEKKD 90 (350)
T ss_dssp EEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSSS-------CCHHHHHHHHC-CCTTBCCEEEEEEEC--CCS
T ss_pred cCCcEeeeEEeeCcCeEEEEEEECCCCCEEEEEEECccchH-------HHHHHHHHHhc-CCCCCCcEEEEEEecCccCC
Confidence 34799999999999999999999999999999999765322 23699999999 79999999999853
Q ss_pred CCeEEEEEeccCCCchHHH---HHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCC-CCEEEeec
Q 042823 96 ETAVHVVMELCEGGDLFDR---IIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDN-ALLKVTDF 171 (477)
Q Consensus 96 ~~~~~lv~e~~~gg~L~~~---l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~-~~~kl~Df 171 (477)
..++|+|||||+++.+... ......+++.+++.++.||+.||+|||++||+||||||+|||+ +.+ ..+||+||
T Consensus 91 ~~~~~lv~Ey~~~~~~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~yLH~~~IiHrDiKp~NILl---~~~~~~~kl~DF 167 (350)
T d1q5ka_ 91 EVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL---DPDTAVLKLCDF 167 (350)
T ss_dssp CCEEEEEEECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEE---CTTTCCEEECCC
T ss_pred ceEEEEEEeccCCccHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCcceEEE---ecCCCceeEecc
Confidence 3458999999987643222 2345679999999999999999999999999999999999999 544 48999999
Q ss_pred CCccccCCCcceecccccccccchhhhhh--hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCC--------
Q 042823 172 GSALLFEEGQVYRDIVGSGFYIAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGE-------- 241 (477)
Q Consensus 172 g~a~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~-------- 241 (477)
|++............+||+.|+|||++.+ .|+.++||||+||++|+|++|.+||...+....+..+.+..
T Consensus 168 G~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DIwSlG~il~el~~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~ 247 (350)
T d1q5ka_ 168 GSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI 247 (350)
T ss_dssp TTCEECCTTSCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCHHHH
T ss_pred cchhhccCCcccccccccccccChHHhhcccCCCcceeecccceEEEehhhCCCCCCCCCHHHHHHHHHHHhCCChHHhh
Confidence 99988776666677899999999998754 58999999999999999999999998888777666554310
Q ss_pred ---------ccCC--------CCCCCCCCHHHHHHHHHhcccCccccCCHHHHhcCcccCcCC
Q 042823 242 ---------IDFD--------TDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESG 287 (477)
Q Consensus 242 ---------~~~~--------~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~~ 287 (477)
..++ ....+.+|+++.+||.+||++||++|||+.|+|+||||++..
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~~ 310 (350)
T d1q5ka_ 248 REMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELR 310 (350)
T ss_dssp HHHCC---CCCCCCCCCCCGGGTSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGGGG
T ss_pred hhhccchhhccccccccCchhhhcccCCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhcccc
Confidence 0111 112345799999999999999999999999999999998653
|
| >d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38-gamma species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7.1e-55 Score=422.78 Aligned_cols=266 Identities=24% Similarity=0.373 Sum_probs=216.6
Q ss_pred ccccccccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEE
Q 042823 13 ILGKAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKST 92 (477)
Q Consensus 13 ~~~~~~~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~ 92 (477)
-+++...++.++|++++.||+|+||+||+|.++.+|+.||||++.+.. ........+.+|+++++.+ +|||||+++++
T Consensus 8 ~~~~~~~~~~~~Y~~i~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~-~~~~~~~~~~~Ei~il~~l-~hpniv~l~~~ 85 (346)
T d1cm8a_ 8 EVTKTAWEVRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPF-QSELFAKRAYRELRLLKHM-RHENVIGLLDV 85 (346)
T ss_dssp ECSSSEECCBSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTT-SSHHHHHHHHHHHHHHHHC-CBTTBCCCSEE
T ss_pred eccCceeecCCcEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEchhh-cChHHHHHHHHHHHHHHhc-CCCCeeEEEEE
Confidence 344555668999999999999999999999999999999999997543 3344567788999999999 79999999999
Q ss_pred EEeCC------eEEEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCE
Q 042823 93 YEDET------AVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALL 166 (477)
Q Consensus 93 ~~~~~------~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~ 166 (477)
|...+ .+|+||||| |++|..++ +.+.+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+
T Consensus 86 ~~~~~~~~~~~~~~lv~e~~-~~~l~~~~-~~~~l~~~~~~~~~~qi~~aL~~LH~~~IiHrDiKp~NIL~---~~~~~~ 160 (346)
T d1cm8a_ 86 FTPDETLDDFTDFYLVMPFM-GTDLGKLM-KHEKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAV---NEDCEL 160 (346)
T ss_dssp ECSCSSTTTCCCCEEEEECC-SEEHHHHH-HHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE---CTTCCE
T ss_pred eccCccccccceEEEEEecc-cccHHHHH-HhccccHHHHHHHHHHHHHHHHHHHhCCCcccccCcchhhc---cccccc
Confidence 97654 579999999 55676554 55679999999999999999999999999999999999999 788999
Q ss_pred EEeecCCccccCCCcceecccccccccchhhhhh--hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCc--
Q 042823 167 KVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEI-- 242 (477)
Q Consensus 167 kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~-- 242 (477)
||+|||+|...... .....||+.|+|||++.+ .++.++||||+||++|+|++|.+||.+.+....+..+.....
T Consensus 161 kl~Dfg~a~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~ 238 (346)
T d1cm8a_ 161 KILDFGLARQADSE--MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTP 238 (346)
T ss_dssp EECCCTTCEECCSS--CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCC
T ss_pred ccccccceeccCCc--cccccccccccCHHHHcCCCCCCccchhhcchHHHHHHHHCcCCCCCCChHHHHHHHHhccCCC
Confidence 99999999876543 356789999999999864 478999999999999999999999988776655544332111
Q ss_pred ---------------------cCCC----CCCCCCCHHHHHHHHHhcccCccccCCHHHHhcCcccCcCC
Q 042823 243 ---------------------DFDT----DPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESG 287 (477)
Q Consensus 243 ---------------------~~~~----~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~~ 287 (477)
.... ...+.+|+++++||.+||..||++|||+.|+|+||||+...
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~eiL~Hp~f~~~~ 308 (346)
T d1cm8a_ 239 PAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESLH 308 (346)
T ss_dssp CHHHHHTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTTC
T ss_pred cHHHHhhhcchhhhhhhccCCcccccchHHhccCCCHHHHHHHHHHCcCChhHCcCHHHHhcChhhCcCC
Confidence 1111 12346789999999999999999999999999999998643
|
| >d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Ribosomal protein S6 kinase alpha 5, Msk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.6e-55 Score=418.86 Aligned_cols=263 Identities=29% Similarity=0.509 Sum_probs=224.4
Q ss_pred ccccccccccccccCCeEEEEEEE---ccCCceEEEEEeecCCcc-chhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeC
Q 042823 21 VMLHYFFGRMLGRGQFGVSYLCTE---NSTNRPYACKSIAKKPKM-RLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDE 96 (477)
Q Consensus 21 ~~~~Y~~~~~iG~G~~g~V~~~~~---~~~~~~~aiK~~~~~~~~-~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~ 96 (477)
-.++|++++.||+|+||+||+|.+ +.+|+.||+|++.+.... .......+.+|+.++.++.+||||+++++++++.
T Consensus 22 ~l~~y~~~~~IG~G~fg~Vy~~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~~E~~il~~l~h~pnIv~~~~~~~~~ 101 (322)
T d1vzoa_ 22 GIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTE 101 (322)
T ss_dssp CGGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEET
T ss_pred chhceEEEEEEecCCCeEEEEEEECccCCCCcEEEEEEEehHHhccchHHHHHHHHHHHHHHhccCCCeEEEeeeeeccC
Confidence 357899999999999999999987 447899999998654321 1123455778999999997669999999999999
Q ss_pred CeEEEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccc
Q 042823 97 TAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALL 176 (477)
Q Consensus 97 ~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~ 176 (477)
..+|+|||||.||+|.+++...+.+++..+..++.||+.||.|||++||+||||||+||++ +.++.+||+|||+|..
T Consensus 102 ~~~~~v~e~~~~~~L~~~i~~~~~~~e~~~~~~~~Qi~~al~~lH~~~ivHrDiKp~Nill---~~~~~vkL~DFG~a~~ 178 (322)
T d1vzoa_ 102 TKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILL---DSNGHVVLTDFGLSKE 178 (322)
T ss_dssp TEEEEEECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE---CTTSCEEESCSSEEEE
T ss_pred CceeeeeecccccHHHHHHHhcccccHHHHHHHHHHHHHHHHHhhcCCEEeccCCccceee---cCCCCEEEeeccchhh
Confidence 9999999999999999999999999999999999999999999999999999999999999 7788999999999976
Q ss_pred cCCC--cceecccccccccchhhhhh---hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCCCCCCCC
Q 042823 177 FEEG--QVYRDIVGSGFYIAPEVLRR---RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFDTDPWPS 251 (477)
Q Consensus 177 ~~~~--~~~~~~~gt~~y~aPE~~~~---~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 251 (477)
.... .......|++.|+|||.+.+ .++.++|||||||++|+|+||..||.+.+.......+.++.........+.
T Consensus 179 ~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~ksDIWSlG~iLyelltG~~PF~~~~~~~~~~~i~~~~~~~~~~~~~~ 258 (322)
T d1vzoa_ 179 FVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQE 258 (322)
T ss_dssp CCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHHHCCCCCCTT
T ss_pred hcccccccccccccccccchhHHhhcCCcCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcccCCCCCccc
Confidence 5432 23345689999999999864 478899999999999999999999988777666666665544444444457
Q ss_pred CCHHHHHHHHHhcccCccccC-----CHHHHhcCcccCcC
Q 042823 252 ISSTAKDLVRRMLTKDPKRRI-----TAAQVLEHPWLRES 286 (477)
Q Consensus 252 ~~~~~~~li~~~l~~dp~~R~-----s~~~~l~h~~~~~~ 286 (477)
+|+++.+||.+||.+||++|| |++|+++||||+..
T Consensus 259 ~s~~~~~li~~~l~~dP~~R~s~~~~t~~eil~Hpff~~i 298 (322)
T d1vzoa_ 259 MSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQKI 298 (322)
T ss_dssp SCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSGGGTTC
T ss_pred CCHHHHHHHHHHcccCHHHcCCCCcccHHHHHcCHhhcCC
Confidence 899999999999999999999 58999999999753
|
| >d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase Itk/Tsk species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=9.9e-55 Score=404.65 Aligned_cols=246 Identities=22% Similarity=0.332 Sum_probs=203.8
Q ss_pred ccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 042823 23 LHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVV 102 (477)
Q Consensus 23 ~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~lv 102 (477)
++|++++.||+|+||+||+|.++ +++.||||++..... ..+.+.+|++++.++ +|||||++++++..++.+|+|
T Consensus 5 ~~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~i~~~~~----~~~~~~~E~~~l~~l-~HpnIv~~~g~~~~~~~~~lv 78 (263)
T d1sm2a_ 5 SELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAM----SEEDFIEEAEVMMKL-SHPKLVQLYGVCLEQAPICLV 78 (263)
T ss_dssp SCEEEEEEEECCSSCCEEEEEET-TTEEEEEEECCSSSS----CHHHHHHHHHHHHHC-CCTTBCCEEEEECSSSSCEEE
T ss_pred HHcEEEEEEeeCCCeEEEEEEEC-CCCEEEEEEECCCcC----cHHHHHHHHHHHHhc-CCCCcccccceeccCCceEEE
Confidence 57999999999999999999986 567899999865432 345688999999999 799999999999999999999
Q ss_pred EeccCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCCCc
Q 042823 103 MELCEGGDLFDRIIAK-GYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQ 181 (477)
Q Consensus 103 ~e~~~gg~L~~~l~~~-~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~ 181 (477)
||||++|+|.+++... ..+++..+..++.||+.||.|||+++|+||||||+|||+ +.++.+||+|||+|+......
T Consensus 79 ~E~~~~g~L~~~l~~~~~~~~~~~~~~i~~qia~gl~~lH~~~iiHrDlKp~Nill---~~~~~~Kl~DFGla~~~~~~~ 155 (263)
T d1sm2a_ 79 FEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLV---GENQVIKVSDFGMTRFVLDDQ 155 (263)
T ss_dssp EECCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCTTCSGGGEEE---CGGGCEEECSCC---------
T ss_pred EEecCCCcHHHHhhccccCCCHHHHHHHHHHHHHHHHhhhccceeecccchhheee---cCCCCeEecccchheeccCCC
Confidence 9999999999998765 568999999999999999999999999999999999999 778899999999998764432
Q ss_pred c--eecccccccccchhhhhh-hcCCccchHhHHHHHHHHhh-CCCCCCCCChhhHHHHHHcCCccCCCCCCCCCCHHHH
Q 042823 182 V--YRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAK 257 (477)
Q Consensus 182 ~--~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~t-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 257 (477)
. .....||+.|+|||++.+ .|+.++|||||||++|||+| |.+||...+..+....+..+..... ...+|+++.
T Consensus 156 ~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvil~el~t~~~~~~~~~~~~~~~~~i~~~~~~~~---p~~~~~~l~ 232 (263)
T d1sm2a_ 156 YTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYK---PRLASTHVY 232 (263)
T ss_dssp ---------CTTSCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSCCHHHHHHHHHHTCCCCC---CTTSCHHHH
T ss_pred ceeecceecCcccCChHHhcCCCCCchhhhcchHHHHHHHHHCCCCCCCCCCHHHHHHHHHhcCCCCC---ccccCHHHH
Confidence 2 234578999999999974 69999999999999999999 6777777777777777777643322 246789999
Q ss_pred HHHHHhcccCccccCCHHHHhcC
Q 042823 258 DLVRRMLTKDPKRRITAAQVLEH 280 (477)
Q Consensus 258 ~li~~~l~~dp~~R~s~~~~l~h 280 (477)
+|+.+||+.||++|||++++++|
T Consensus 233 ~li~~cl~~~p~~Rps~~~il~~ 255 (263)
T d1sm2a_ 233 QIMNHCWKERPEDRPAFSRLLRQ 255 (263)
T ss_dssp HHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHHHccCCHhHCcCHHHHHHH
Confidence 99999999999999999999875
|
| >d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: ephb2 receptor tyrosine kinase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=1.7e-54 Score=410.05 Aligned_cols=252 Identities=23% Similarity=0.319 Sum_probs=205.6
Q ss_pred cccccccccccccccCCeEEEEEEEccCCc---eEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeC
Q 042823 20 DVMLHYFFGRMLGRGQFGVSYLCTENSTNR---PYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDE 96 (477)
Q Consensus 20 ~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~---~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~ 96 (477)
...++|++.+.||+|+||+||+|.++.+++ .||||.+.... .......+.+|+.++.++ +|||||++++++..+
T Consensus 23 i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l-~HpnIv~l~g~~~~~ 99 (299)
T d1jpaa_ 23 IDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGY--TEKQRRDFLSEASIMGQF-DHPNVIHLEGVVTKS 99 (299)
T ss_dssp CCGGGEEEEEEEEECSSSEEEEEEECC---CCEEEEEEECCSSC--CHHHHHHHHHHHHHHTTC-CCTTBCCEEEEECSS
T ss_pred hChhhcEEeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEECccc--CHHHHHHHHHHHHHHHhC-CCCCCccEEEEEeeC
Confidence 445789999999999999999999987765 57888775432 334556789999999999 799999999999999
Q ss_pred CeEEEEEeccCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCcc
Q 042823 97 TAVHVVMELCEGGDLFDRIIAK-GYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSAL 175 (477)
Q Consensus 97 ~~~~lv~e~~~gg~L~~~l~~~-~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~ 175 (477)
+.+|+|||||+||+|.+++... +.+++.++..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+|+
T Consensus 100 ~~~~iv~Ey~~~g~L~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHrDlKp~NILl---~~~~~~Kl~DFGla~ 176 (299)
T d1jpaa_ 100 TPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMNYVHRDLAARNILV---NSNLVCKVSDFGLSR 176 (299)
T ss_dssp SSCEEEEECCTTEEHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE---CTTCCEEECCC----
T ss_pred CEEEEEEEecCCCcceeeeccccCCCCHHHHHHHHHHHHHHHHHHhhCCCccCccccceEEE---CCCCcEEECCcccce
Confidence 9999999999999999988874 568999999999999999999999999999999999999 788899999999998
Q ss_pred ccCCCcce------ecccccccccchhhhh-hhcCCccchHhHHHHHHHHhh-CCCCCCCCChhhHHHHHHcCCccCCCC
Q 042823 176 LFEEGQVY------RDIVGSGFYIAPEVLR-RRYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQGEIDFDTD 247 (477)
Q Consensus 176 ~~~~~~~~------~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~l~t-g~~pf~~~~~~~~~~~i~~~~~~~~~~ 247 (477)
........ ....||+.|+|||++. +.|+.++|||||||++|||+| |.+||.+.+..+....+..+... +
T Consensus 177 ~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~sDvwS~Gvvl~el~t~g~~Pf~~~~~~~~~~~i~~~~~~---~ 253 (299)
T d1jpaa_ 177 FLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQDYRL---P 253 (299)
T ss_dssp -------------------CGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCC---C
T ss_pred EccCCCCcceeeecccccCCccccCHHHHhcCCCCcccccccchHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCC---C
Confidence 76443221 2245789999999987 468999999999999999998 89999998888888887765322 2
Q ss_pred CCCCCCHHHHHHHHHhcccCccccCCHHHHhcC
Q 042823 248 PWPSISSTAKDLVRRMLTKDPKRRITAAQVLEH 280 (477)
Q Consensus 248 ~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h 280 (477)
....+|+.+.+|+.+||+.||++|||+.+++++
T Consensus 254 ~~~~~~~~l~~li~~cl~~~P~~RPs~~ei~~~ 286 (299)
T d1jpaa_ 254 PPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNT 286 (299)
T ss_dssp CCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHH
T ss_pred CCccchHHHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence 335789999999999999999999999999764
|
| >d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Bruton's tyrosine kinase (Btk) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.2e-54 Score=399.09 Aligned_cols=246 Identities=21% Similarity=0.287 Sum_probs=216.1
Q ss_pred ccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 042823 23 LHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVV 102 (477)
Q Consensus 23 ~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~lv 102 (477)
++|+++++||+|+||+||+|+++ +++.||||++.+... ..+.+.+|+.++.++ +||||+++++++.+++.+|+|
T Consensus 4 ~~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~----~~~~~~~Ev~~~~~l-~HpnIv~~~g~~~~~~~~~iv 77 (258)
T d1k2pa_ 4 KDLTFLKELGTGQFGVVKYGKWR-GQYDVAIKMIKEGSM----SEDEFIEEAKVMMNL-SHEKLVQLYGVCTKQRPIFII 77 (258)
T ss_dssp CCCCCCCCCCEETTEEEEEEEET-TTEEEEEEEEESSSS----CHHHHHHHHHHHHTC-CCTTBCCEEEEECCSSSEEEE
T ss_pred HHCEEeEEEecCCCeEEEEEEEC-CCCEEEEEEECcCcC----CHHHHHHHHHHHHhc-CCCceeeEEEEEeeCCceEEE
Confidence 57899999999999999999985 788999999976543 245788999999999 799999999999999999999
Q ss_pred EeccCCCchHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCCCc
Q 042823 103 MELCEGGDLFDRIIA-KGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQ 181 (477)
Q Consensus 103 ~e~~~gg~L~~~l~~-~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~ 181 (477)
||||++|+|.+++.. ...+++..+..++.||+.||.|||++||+||||||+||++ +.++.+||+|||+|.......
T Consensus 78 ~Ey~~~g~l~~~~~~~~~~~~~~~~~~i~~qi~~gl~~LH~~~iiH~dlk~~Nill---~~~~~~kl~DfG~a~~~~~~~ 154 (258)
T d1k2pa_ 78 TEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLV---NDQGVVKVSDFGLSRYVLDDE 154 (258)
T ss_dssp EECCTTEEHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTBCCSCCSGGGEEE---CTTCCEEECCCSSCCBCSSSS
T ss_pred EEccCCCcHHHhhhccccCCcHHHHHHHHHHHHHHHHHHhhcCcccccccceeEEE---cCCCcEEECcchhheeccCCC
Confidence 999999999998765 4568999999999999999999999999999999999999 778899999999998664432
Q ss_pred c--eecccccccccchhhhhh-hcCCccchHhHHHHHHHHhh-CCCCCCCCChhhHHHHHHcCCccCCCCCCCCCCHHHH
Q 042823 182 V--YRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAK 257 (477)
Q Consensus 182 ~--~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~t-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 257 (477)
. .....||+.|+|||++.+ .|+.++|||||||++|||+| |..||.+.+..+....+.++.... ....+++++.
T Consensus 155 ~~~~~~~~~t~~y~aPE~~~~~~~~~ksDiwS~G~~l~el~t~g~~Pf~~~~~~~~~~~i~~~~~~~---~p~~~~~~l~ 231 (258)
T d1k2pa_ 155 YTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLY---RPHLASEKVY 231 (258)
T ss_dssp CCCCCCSCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHHHHHTTCCCC---CCTTCCHHHH
T ss_pred ceeecccCCCCCcCCcHHhcCCCCCcceeecccchhhHhHHhcCCCCCCCCCHHHHHHHHHhCCCCC---CcccccHHHH
Confidence 2 234578999999999874 68999999999999999998 899999999888888888764332 2246789999
Q ss_pred HHHHHhcccCccccCCHHHHhcC
Q 042823 258 DLVRRMLTKDPKRRITAAQVLEH 280 (477)
Q Consensus 258 ~li~~~l~~dp~~R~s~~~~l~h 280 (477)
+||.+||+.||++|||++++++|
T Consensus 232 ~li~~cl~~dP~~RPt~~eil~~ 254 (258)
T d1k2pa_ 232 TIMYSCWHEKADERPTFKILLSN 254 (258)
T ss_dssp HHHHHTTCSSGGGSCCHHHHHHH
T ss_pred HHHHHHccCCHhHCcCHHHHHHH
Confidence 99999999999999999999987
|
| >d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase SYK species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=9.9e-55 Score=407.09 Aligned_cols=246 Identities=21% Similarity=0.279 Sum_probs=206.7
Q ss_pred ccccccCCeEEEEEEEc--cCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEecc
Q 042823 29 RMLGRGQFGVSYLCTEN--STNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHVVMELC 106 (477)
Q Consensus 29 ~~iG~G~~g~V~~~~~~--~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~lv~e~~ 106 (477)
+.||+|+||+||+|.+. .+++.||||++..... .....+.+.+|+.++.++ +|||||++++++.++ ..|||||||
T Consensus 13 k~iG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~-~~~~~~~~~~E~~il~~l-~HpnIv~~~g~~~~~-~~~lvmE~~ 89 (277)
T d1xbba_ 13 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEAN-DPALKDELLAEANVMQQL-DNPYIVRMIGICEAE-SWMLVMEMA 89 (277)
T ss_dssp EEEEECSSEEEEEEEEECSSSEEEEEEEEEC------CHHHHHHHHHHHHHHTC-CCTTBCCEEEEEESS-SEEEEEECC
T ss_pred CCcccCCCeEEEEEEEccCCcCeEEEEEEEChhhC-CHHHHHHHHHHHHHHHhC-CCCCCceEEEEeccC-CEEEEEEcC
Confidence 57999999999999864 4567899999865432 334557789999999999 799999999999754 578999999
Q ss_pred CCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCCCcce---
Q 042823 107 EGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQVY--- 183 (477)
Q Consensus 107 ~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~--- 183 (477)
+||+|.+++.+...+++.++..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+|+........
T Consensus 90 ~~g~L~~~l~~~~~l~~~~~~~i~~qi~~gl~ylH~~~iiHrDlKp~Nill---~~~~~~kl~DFGla~~~~~~~~~~~~ 166 (277)
T d1xbba_ 90 ELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLL---VTQHYAKISDFGLSKALRADENYYKA 166 (277)
T ss_dssp TTEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE---EETTEEEECCCTTCEECCTTCSEEEC
T ss_pred CCCcHHHHHhhccCCCHHHHHHHHHHHHHHHhhHHhCCcccCCCcchhhcc---cccCcccccchhhhhhcccccccccc
Confidence 999999999999999999999999999999999999999999999999999 66788999999999876443221
Q ss_pred -ecccccccccchhhhhh-hcCCccchHhHHHHHHHHhh-CCCCCCCCChhhHHHHHHcCCccCCCCCCCCCCHHHHHHH
Q 042823 184 -RDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLV 260 (477)
Q Consensus 184 -~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~t-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li 260 (477)
....||+.|+|||++.+ .++.++|||||||++|||+| |.+||.+.+..+....+.++... +..+.+|+++.+||
T Consensus 167 ~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gv~l~ellt~g~~Pf~~~~~~~~~~~i~~~~~~---~~p~~~~~~~~~li 243 (277)
T d1xbba_ 167 QTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERM---GCPAGCPREMYDLM 243 (277)
T ss_dssp ----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCC---CCCTTCCHHHHHHH
T ss_pred ccccCCCceecCchhhcCCCCCchhhhccchhhhhHHhhCCCCCCCCCCHHHHHHHHHcCCCC---CCCcccCHHHHHHH
Confidence 23578999999999864 68999999999999999998 89999998888888777776432 22256899999999
Q ss_pred HHhcccCccccCCHHHHh---cCccc
Q 042823 261 RRMLTKDPKRRITAAQVL---EHPWL 283 (477)
Q Consensus 261 ~~~l~~dp~~R~s~~~~l---~h~~~ 283 (477)
.+||+.||++|||+.+++ +|+|+
T Consensus 244 ~~cl~~dp~~RPs~~~i~~~L~~~~~ 269 (277)
T d1xbba_ 244 NLCWTYDVENRPGFAAVELRLRNYYY 269 (277)
T ss_dssp HHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred HHHcCCCHhHCcCHHHHHHHhhCHHh
Confidence 999999999999999984 55554
|
| >d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 9, CDK9 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.9e-54 Score=415.04 Aligned_cols=262 Identities=24% Similarity=0.356 Sum_probs=215.1
Q ss_pred ccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEe-----
Q 042823 21 VMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYED----- 95 (477)
Q Consensus 21 ~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~----- 95 (477)
-.++|++++.||+|+||+||+|+++.+|+.||||++.+.... ......+.+|+.+++.+ +||||+++++++..
T Consensus 8 ~~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~-~~~~~~~~~E~~il~~l-~h~nii~~~~~~~~~~~~~ 85 (318)
T d3blha1 8 EVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEK-EGFPITALREIKILQLL-KHENVVNLIEICRTKASPY 85 (318)
T ss_dssp BGGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC----CT-TSSCHHHHHHHHHHHHC-CCTTBCCEEEEEEC-----
T ss_pred ccCCEEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcc-hHHHHHHHHHHHHHHHh-cCCCccceEeeeecccccc
Confidence 358999999999999999999999999999999998654332 23446678999999999 79999999999854
Q ss_pred ---CCeEEEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecC
Q 042823 96 ---ETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFG 172 (477)
Q Consensus 96 ---~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg 172 (477)
+..+|+|||||.++.+.........+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||
T Consensus 86 ~~~~~~~~iv~e~~~~~~~~~~~~~~~~~~~~~~~~i~~qil~~l~~lH~~~ivHrDlKp~NILl---~~~~~~kl~dfg 162 (318)
T d3blha1 86 NRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLI---TRDGVLKLADFG 162 (318)
T ss_dssp -----CEEEEEECCCEEHHHHHTCTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE---CTTSCEEECCCT
T ss_pred cccCceEEEEEeccCCCccchhhhcccccccHHHHHHHHHHHHHHHHhccCCEEecCcCchheee---cCCCcEEeeecc
Confidence 45689999999887776555566789999999999999999999999999999999999999 788899999999
Q ss_pred CccccCCC-----cceecccccccccchhhhhh--hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCC
Q 042823 173 SALLFEEG-----QVYRDIVGSGFYIAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFD 245 (477)
Q Consensus 173 ~a~~~~~~-----~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~ 245 (477)
++...... ......+||+.|+|||++.+ .|+.++||||+||++|+|++|++||.+.+.......+.+....+.
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~k~DiwSlGvil~el~~g~~pf~~~~~~~~~~~i~~~~~~~~ 242 (318)
T d3blha1 163 LARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSIT 242 (318)
T ss_dssp TCEECCC-----CCCCCSCCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCC
T ss_pred eeeecccccccccccccceecCHHHhhHHHHcCCCCCCcHHHcccCCceeeeHhhCCCCCCCCCHHHHHHHHHHhcCCCC
Confidence 99765432 12234579999999999864 589999999999999999999999998887777666554332222
Q ss_pred CCCCCC----------------------------CCHHHHHHHHHhcccCccccCCHHHHhcCcccCcCC
Q 042823 246 TDPWPS----------------------------ISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESG 287 (477)
Q Consensus 246 ~~~~~~----------------------------~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~~ 287 (477)
...+.. .++++++||.+||++||++|||+.|+|+||||+...
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~sa~elL~Hpff~~~p 312 (318)
T d3blha1 243 PEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFFWSDP 312 (318)
T ss_dssp TTTSTTCCCC-------CCSSCCBCHHHHHHHHHCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGSSSS
T ss_pred hhhccccchhhhhhhhcccccccccchhhhccccCCHHHHHHHHHHCcCChhHCcCHHHHHcChhhccCC
Confidence 221111 367889999999999999999999999999998643
|
| >d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase ZAP-70 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.6e-54 Score=405.40 Aligned_cols=252 Identities=22% Similarity=0.300 Sum_probs=212.3
Q ss_pred cccccccc-ccccCCeEEEEEEEccC--CceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeE
Q 042823 23 LHYFFGRM-LGRGQFGVSYLCTENST--NRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAV 99 (477)
Q Consensus 23 ~~Y~~~~~-iG~G~~g~V~~~~~~~~--~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~ 99 (477)
++|.+.+. ||+|+||+||+|.++.+ +..||||++.... .......+.+|++++.++ +|||||++++++.++ .+
T Consensus 8 ~~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vAvK~l~~~~--~~~~~~~~~~E~~il~~l-~HpnIv~l~g~~~~~-~~ 83 (285)
T d1u59a_ 8 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGT--EKADTEEMMREAQIMHQL-DNPYIVRLIGVCQAE-AL 83 (285)
T ss_dssp GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSC--CHHHHHHHHHHHHHHHHC-CCTTBCCEEEEEESS-SE
T ss_pred cCeEECCcEEecccCeEEEEEEEecCCCcEEEEEEEEChhc--CHHHHHHHHHHHHHHHhC-CCCCEeeEeeeeccC-eE
Confidence 46777774 99999999999987643 4579999986543 344567889999999999 799999999999754 58
Q ss_pred EEEEeccCCCchHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccC
Q 042823 100 HVVMELCEGGDLFDRIIA-KGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFE 178 (477)
Q Consensus 100 ~lv~e~~~gg~L~~~l~~-~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~ 178 (477)
|+|||||+||+|.+++.. ++.+++.++..++.||+.||.|||++||+||||||+||++ +.++.+||+|||+|....
T Consensus 84 ~lvmE~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~Nill---~~~~~~Kl~DFGla~~~~ 160 (285)
T d1u59a_ 84 MLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLL---VNRHYAKISDFGLSKALG 160 (285)
T ss_dssp EEEEECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE---EETTEEEECCCTTCEECT
T ss_pred EEEEEeCCCCcHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHhCCeecCcCchhheee---ccCCceeeccchhhhccc
Confidence 999999999999998765 4579999999999999999999999999999999999999 567789999999998765
Q ss_pred CCcce----ecccccccccchhhhh-hhcCCccchHhHHHHHHHHhh-CCCCCCCCChhhHHHHHHcCCccCCCCCCCCC
Q 042823 179 EGQVY----RDIVGSGFYIAPEVLR-RRYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQGEIDFDTDPWPSI 252 (477)
Q Consensus 179 ~~~~~----~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~l~t-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 252 (477)
..... ....||+.|+|||++. +.++.++|||||||++|||+| |.+||.+.+..+....+.++... +..+.+
T Consensus 161 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwS~Gv~l~E~lt~G~~Pf~~~~~~~~~~~i~~~~~~---~~p~~~ 237 (285)
T d1u59a_ 161 ADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRM---ECPPEC 237 (285)
T ss_dssp TCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHHHHHHTTCCC---CCCTTC
T ss_pred ccccccccccccccCccccChHHHhCCCCCccchhhcchHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCC---CCCCcC
Confidence 43321 2346899999999987 468999999999999999998 99999988888888888776532 223578
Q ss_pred CHHHHHHHHHhcccCccccCCHHHH---hcCcccC
Q 042823 253 SSTAKDLVRRMLTKDPKRRITAAQV---LEHPWLR 284 (477)
Q Consensus 253 ~~~~~~li~~~l~~dp~~R~s~~~~---l~h~~~~ 284 (477)
|+++.+||.+||+.||++|||+.++ |+|+|+.
T Consensus 238 ~~~l~~li~~cl~~~p~~RPs~~~i~~~L~~~~~~ 272 (285)
T d1u59a_ 238 PPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYS 272 (285)
T ss_dssp CHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHH
Confidence 9999999999999999999999888 5566653
|
| >d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase CK2, alpha subunit species: Rattus norvegicus [TaxId: 10116]
Probab=100.00 E-value=3e-54 Score=415.40 Aligned_cols=255 Identities=27% Similarity=0.461 Sum_probs=212.1
Q ss_pred ccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEe--CCe
Q 042823 21 VMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYED--ETA 98 (477)
Q Consensus 21 ~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~--~~~ 98 (477)
..++|++++.||+|+||+||+|+++.+|+.||+|++.+. ....+.+|+.++..+.+||||++++++|.. ...
T Consensus 33 ~~d~y~i~~~LG~G~fg~V~~a~~~~~~~~vAiK~i~~~------~~~~~~~Ei~il~~l~~hpnIv~~~~~~~~~~~~~ 106 (328)
T d3bqca1 33 NQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV------KKKKIKREIKILENLRGGPNIITLADIVKDPVSRT 106 (328)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSS------CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCS
T ss_pred CCcCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEECHH------HHHHHHHHHHHHHhccCCCCCcEEEEEEEecCCCc
Confidence 447899999999999999999999999999999998643 245678999999999779999999999974 457
Q ss_pred EEEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccC
Q 042823 99 VHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFE 178 (477)
Q Consensus 99 ~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~ 178 (477)
+|+|||||++|+|.+. .+.+++.+++.+++||+.||.|||++||+||||||+|||+. .++..+||+|||+|....
T Consensus 107 ~~~v~e~~~~~~L~~~---~~~l~e~~i~~i~~qil~aL~~LH~~gIvHrDiKp~NILi~--~~~~~vkl~DFG~a~~~~ 181 (328)
T d3bqca1 107 PALVFEHVNNTDFKQL---YQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMID--HEHRKLRLIDWGLAEFYH 181 (328)
T ss_dssp EEEEEECCCSCBGGGT---TTSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEE--TTTTEEEECCGGGCEECC
T ss_pred eeEEEeecCCCcHHHH---hcCCCHHHHHHHHHHHHHHHHHHhhcccccccccccceEEc--CCCCeeeecccccceecc
Confidence 9999999999999765 35699999999999999999999999999999999999983 234569999999998877
Q ss_pred CCcceecccccccccchhhhhh--hcCCccchHhHHHHHHHHhhCCCCCCCCChhh-HHHHHHc-------------CCc
Q 042823 179 EGQVYRDIVGSGFYIAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPFWAETKKG-TYDAILQ-------------GEI 242 (477)
Q Consensus 179 ~~~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~-~~~~i~~-------------~~~ 242 (477)
........+||+.|+|||++.+ .++.++||||+||++|+|++|..||....... ....+.. ...
T Consensus 182 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~~l~e~~~g~~pf~~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~ 261 (328)
T d3bqca1 182 PGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNI 261 (328)
T ss_dssp TTCCCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTC
T ss_pred CCCcccccccCccccCcccccCCCCCCcccchhhhhhhhHHhccCCCCCCCCchhHHHHHHHHHHHCCchhhhhhhhccc
Confidence 6666677789999999999864 47999999999999999999999997654322 1111110 000
Q ss_pred c--------------------CCCCCCCCCCHHHHHHHHHhcccCccccCCHHHHhcCcccCcC
Q 042823 243 D--------------------FDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRES 286 (477)
Q Consensus 243 ~--------------------~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~ 286 (477)
. .....+..+|+++++||++||++||++|||++|+|+||||+..
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~e~L~Hp~F~~v 325 (328)
T d3bqca1 262 ELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTV 325 (328)
T ss_dssp CCCGGGGGTCCCCCCCCGGGGCCTTTGGGCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTS
T ss_pred ccCcccchhcccccccchhhcccccccccCCHHHHHHHHHHccCChhHCcCHHHHhcCcccCCC
Confidence 0 0111223478999999999999999999999999999999864
|
| >d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK5 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.2e-53 Score=404.69 Aligned_cols=260 Identities=25% Similarity=0.392 Sum_probs=219.7
Q ss_pred cccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEE
Q 042823 22 MLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVHV 101 (477)
Q Consensus 22 ~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~l 101 (477)
+++|++++.||+|+||+||+|+++.+++.||||++..... .......+.+|+.+++.+ +||||+++++++.+...+++
T Consensus 1 ~~ry~~i~~LG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~-~~~~~~~~~~E~~il~~l-~h~niv~~~~~~~~~~~~~i 78 (292)
T d1unla_ 1 MQKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDD-DEGVPSSALREICLLKEL-KHKNIVRLHDVLHSDKKLTL 78 (292)
T ss_dssp CCSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCS-STTHHHHHHHHHHHHTTC-CCTTBCCEEEEEECSSEEEE
T ss_pred CCCCEeeeEEecCcCeEEEEEEECCCCcEEEEEEEehhhC-ChHHHHHHHHHHHHHHhc-CcCCEEeeccccccccceeE
Confidence 3689999999999999999999999999999999976543 334567889999999998 79999999999999999999
Q ss_pred EEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCCCc
Q 042823 102 VMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQ 181 (477)
Q Consensus 102 v~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~ 181 (477)
|++++.|++|..++...+.+++..++.++.|++.||+|||++||+||||||+|||+ +..+.+||+|||.|.......
T Consensus 79 v~~~~~~~~l~~~~~~~~~~~~~~~~~~~~q~~~aL~~lH~~~IvHrDiKP~NIli---~~~~~~kl~DFG~a~~~~~~~ 155 (292)
T d1unla_ 79 VFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLI---NRNGELKLANFGLARAFGIPV 155 (292)
T ss_dssp EEECCSEEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE---CTTCCEEECCCTTCEECCSCC
T ss_pred EeeeccccccccccccccccchhHHHHHHHHHHHHHHHhhcCCEeeecccCccccc---ccCCceeeeecchhhcccCCC
Confidence 99999999999888888899999999999999999999999999999999999999 677889999999998765433
Q ss_pred -ceecccccccccchhhhhh--hcCCccchHhHHHHHHHHhhCCCCCCCC-ChhhHHHHHHcCCccC-------------
Q 042823 182 -VYRDIVGSGFYIAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPFWAE-TKKGTYDAILQGEIDF------------- 244 (477)
Q Consensus 182 -~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~l~tg~~pf~~~-~~~~~~~~i~~~~~~~------------- 244 (477)
......++++|+|||++.+ .++.++||||+||++|+|++|..||... +..+....+.......
T Consensus 156 ~~~~~~~~~~~~~~pe~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (292)
T d1unla_ 156 RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPD 235 (292)
T ss_dssp SCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTT
T ss_pred ccceeeccccchhhhhHhccCCCCCchhhccccchHHHHHhhCCCCCCCCCCHHHHHHHHHhhcCCCChhhhhhhhhccc
Confidence 3344567889999999864 3689999999999999999999886543 4444444433211100
Q ss_pred ------------CCCCCCCCCHHHHHHHHHhcccCccccCCHHHHhcCcccCcC
Q 042823 245 ------------DTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRES 286 (477)
Q Consensus 245 ------------~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~ 286 (477)
.....+.+++.+++||++||+.||.+|||++|+|+||||++.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~sa~e~L~Hp~f~~~ 289 (292)
T d1unla_ 236 YKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSDF 289 (292)
T ss_dssp CCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGSSC
T ss_pred ccccccccccchhhhccccCCHHHHHHHHHHccCChhHCcCHHHHhcChhhcCC
Confidence 011224578999999999999999999999999999999764
|
| >d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase Erk2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.9e-54 Score=416.88 Aligned_cols=262 Identities=30% Similarity=0.422 Sum_probs=212.5
Q ss_pred ccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCC-
Q 042823 19 EDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDET- 97 (477)
Q Consensus 19 ~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~- 97 (477)
-++.++|++++.||+|+||+||+|+++.+|+.||||++.+.. .......+.+|+.++.++ +||||+++++++....
T Consensus 4 ~~i~~rY~~~~~LG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~--~~~~~~~~~~Ei~il~~l-~hp~iv~~~~~~~~~~~ 80 (345)
T d1pmea_ 4 FDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFE--HQTYCQRTLREIKILLRF-RHENIIGINDIIRAPTI 80 (345)
T ss_dssp CCCCTTEEEEEECC---CCCEEEEEETTTCSEEEEEEECCTT--CHHHHHHHHHHHHHHHHC-CCTTBCCCCEEECCSST
T ss_pred cCcCCCeEEEEEEeeccCeEEEEEEECCCCcEEEEEEEehhc--ChHHHHHHHHHHHHHHHc-CCCCCCcEEEEEeeccc
Confidence 356689999999999999999999999999999999996533 334566788999999999 7999999999997653
Q ss_pred ----eEEEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCC
Q 042823 98 ----AVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGS 173 (477)
Q Consensus 98 ----~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~ 173 (477)
.+|++ +|+.||+|.+++... .+++..++.++.||+.||.|||++|||||||||+|||+ +..+.+||+|||+
T Consensus 81 ~~~~~~~l~-~~~~~g~L~~~l~~~-~l~~~~i~~i~~qil~al~yLH~~~iiHRDIKp~NILl---~~~~~~kl~DfG~ 155 (345)
T d1pmea_ 81 EQMKDVYLV-THLMGADLYKLLKTQ-HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLL---NTTCDLKICDFGL 155 (345)
T ss_dssp TTCCCEEEE-EECCCEEHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE---CTTCCEEECCCTT
T ss_pred cccceEEEE-EeecCCchhhhhhcC-CCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCCcceEEE---CCCCCEEEcccCc
Confidence 34555 556688999998654 68999999999999999999999999999999999999 7788999999999
Q ss_pred ccccCCCc----ceecccccccccchhhhhh--hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCcc----
Q 042823 174 ALLFEEGQ----VYRDIVGSGFYIAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEID---- 243 (477)
Q Consensus 174 a~~~~~~~----~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~---- 243 (477)
|....... .....+||+.|+|||++.. .++.++||||+||++|+|++|.+||.+.+..............
T Consensus 156 a~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~eml~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 235 (345)
T d1pmea_ 156 ARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 235 (345)
T ss_dssp CEECCGGGCBCCTTCCCCSCGGGCCGGGTTTBCSCSTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHH
T ss_pred eeeccCCCccceeeccccccceechHHHhhcCCCCCchhhhhccCceehHHhhCCCCCCCCCHHHHHHHHhhhccCCChh
Confidence 97654332 2345679999999999853 4789999999999999999999999887765554433221000
Q ss_pred ----------------CC---C----CCCCCCCHHHHHHHHHhcccCccccCCHHHHhcCcccCcCCC
Q 042823 244 ----------------FD---T----DPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESGE 288 (477)
Q Consensus 244 ----------------~~---~----~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~~~ 288 (477)
.+ . ..++.+|+++++||.+||+.||.+|||+.++|+||||+....
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~ta~e~L~hpf~~~~~~ 303 (345)
T d1pmea_ 236 DLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYD 303 (345)
T ss_dssp HHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGTTTCC
T ss_pred hhhhhhhhhhhcccccCCccCCCCHHHhCCCCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhccCCC
Confidence 00 0 123568899999999999999999999999999999986543
|
| >d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-src tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.2e-53 Score=400.66 Aligned_cols=268 Identities=22% Similarity=0.302 Sum_probs=218.8
Q ss_pred cCCCCCccccccccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCe
Q 042823 7 KNQRDPILGKAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNV 86 (477)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpni 86 (477)
||.......+.++.-.++|++++.||+|+||+||+|+++.+ +.||||++..... ..+.+.+|+.++.++ +||||
T Consensus 1 ~~~~~~~~~~~~~i~~~~~~i~~~iG~G~fg~Vy~~~~~~~-~~vAiK~l~~~~~----~~~~~~~E~~~l~~l-~h~nI 74 (285)
T d1fmka3 1 KPQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTM----SPEAFLQEAQVMKKL-RHEKL 74 (285)
T ss_dssp CCCCSSSSTTCSBCCGGGEEEEEEEEECSSCEEEEEEETTT-EEEEEEECCTTSS----CHHHHHHHHHHHHHC-CCTTB
T ss_pred CCCCCCCCCcceEcCHHHEEEeeEEeeCCCeEEEEEEECCC-CEEEEEEECcccC----CHHHHHHHHHHHHhc-ccCCE
Confidence 34555566677787789999999999999999999998755 5799999865432 346788999999999 79999
Q ss_pred eEEEEEEEeCCeEEEEEeccCCCchHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCC
Q 042823 87 VEFKSTYEDETAVHVVMELCEGGDLFDRIIA--KGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNA 164 (477)
Q Consensus 87 v~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~--~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~ 164 (477)
|++++++.+ +.+|+|||||++|+|..++.. .+.+++.++..++.||+.||+|||++||+||||||+|||+ +.++
T Consensus 75 v~~~g~~~~-~~~~lv~Ey~~~g~l~~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~ivH~DlKp~NIll---~~~~ 150 (285)
T d1fmka3 75 VQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILV---GENL 150 (285)
T ss_dssp CCEEEEECS-SSCEEEECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE---CGGG
T ss_pred eEEEEEEec-CCeEEEEEecCCCchhhhhhhcccccchHHHHHHHHHHHHHHHHHHhhhheecccccceEEEE---CCCC
Confidence 999999854 567899999999999988864 4579999999999999999999999999999999999999 7778
Q ss_pred CEEEeecCCccccCCCc--ceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhC-CCCCCCCChhhHHHHHHcC
Q 042823 165 LLKVTDFGSALLFEEGQ--VYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSG-VPPFWAETKKGTYDAILQG 240 (477)
Q Consensus 165 ~~kl~Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg-~~pf~~~~~~~~~~~i~~~ 240 (477)
.+||+|||+|....... ......||+.|+|||++.. .++.++|||||||++|||+|| .+|+......+.+..+.++
T Consensus 151 ~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDI~S~Giil~el~t~~~p~~~~~~~~~~~~~i~~~ 230 (285)
T d1fmka3 151 VCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG 230 (285)
T ss_dssp CEEECCCCTTC--------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTT
T ss_pred cEEEcccchhhhccCCCceeeccccccccccChHHHhCCCCCcHHhhhcchHHHHHHHhCCCCCCCCCCHHHHHHHHHhc
Confidence 99999999998764433 2234578999999999864 689999999999999999995 5556666666677777665
Q ss_pred CccCCCCCCCCCCHHHHHHHHHhcccCccccCCHHHHhc--CcccCcCC
Q 042823 241 EIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLE--HPWLRESG 287 (477)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~--h~~~~~~~ 287 (477)
.. .+..+.+|+++++||.+||+.||++|||++++++ ++||....
T Consensus 231 ~~---~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~~~~~~~ 276 (285)
T d1fmka3 231 YR---MPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTE 276 (285)
T ss_dssp CC---CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSCSC
T ss_pred CC---CCCCcccCHHHHHHHHHHcccCHhHCcCHHHHHHHHhhhhcCCC
Confidence 32 2234578999999999999999999999999988 88987654
|
| >d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Focal adhesion kinase 1 (fak) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.4e-53 Score=396.83 Aligned_cols=253 Identities=23% Similarity=0.286 Sum_probs=206.0
Q ss_pred cccccccccccccccccCCeEEEEEEEccCC---ceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEE
Q 042823 18 YEDVMLHYFFGRMLGRGQFGVSYLCTENSTN---RPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYE 94 (477)
Q Consensus 18 ~~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~---~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~ 94 (477)
++...++|++++.||+|+||+||+|++..++ ..||+|.+... ........+.+|+.+++++ +|||||++++++.
T Consensus 2 ~ei~~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~vaik~~~~~--~~~~~~~~~~~E~~~l~~l-~HpnIv~l~~~~~ 78 (273)
T d1mp8a_ 2 YEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNC--TSDSVREKFLQEALTMRQF-DHPHIVKLIGVIT 78 (273)
T ss_dssp CBCCGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTT--TSHHHHHHHHHHHHHHHTC-CCTTBCCEEEEEC
T ss_pred CCcCHHHeEEEEEEeeCCCcEEEEEEEecCCceeEEEEEEEeccc--cCHHHHHHHHHHHHHHHhC-CCCCEeeEEEEEe
Confidence 4556789999999999999999999986543 46888887533 2344567789999999999 7999999999996
Q ss_pred eCCeEEEEEeccCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCC
Q 042823 95 DETAVHVVMELCEGGDLFDRIIAK-GYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGS 173 (477)
Q Consensus 95 ~~~~~~lv~e~~~gg~L~~~l~~~-~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~ 173 (477)
++.+|+|||||++|+|.+++... ..+++..+..++.||+.||.|||++||+||||||+||++ +..+.+||+|||+
T Consensus 79 -~~~~~iv~E~~~~g~l~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~iiHrDlKp~NIll---~~~~~~Kl~DfG~ 154 (273)
T d1mp8a_ 79 -ENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLV---SSNDCVKLGDFGL 154 (273)
T ss_dssp -SSSCEEEEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE---EETTEEEECC---
T ss_pred -cCeEEEEEEeccCCcHHhhhhccCCCCCHHHHHHHHHHHHHHhhhhcccCeeccccchhheee---cCCCcEEEccchh
Confidence 56789999999999999987664 568999999999999999999999999999999999999 6677899999999
Q ss_pred ccccCCCcc--eecccccccccchhhhhh-hcCCccchHhHHHHHHHHhh-CCCCCCCCChhhHHHHHHcCCccCCCCCC
Q 042823 174 ALLFEEGQV--YRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQGEIDFDTDPW 249 (477)
Q Consensus 174 a~~~~~~~~--~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~t-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~ 249 (477)
|........ .....||+.|+|||++.+ .|+.++|||||||++|||+| |.+||.+.+..+....+..+... +.+
T Consensus 155 a~~~~~~~~~~~~~~~gt~~y~apE~l~~~~~~~~~DiwSlGvil~e~lt~g~~P~~~~~~~~~~~~i~~~~~~---~~~ 231 (273)
T d1mp8a_ 155 SRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERL---PMP 231 (273)
T ss_dssp ----------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCC---CCC
T ss_pred heeccCCcceeccceecCcccchhhHhccCCCCCccccccchHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCC---CCC
Confidence 987654322 234568999999999874 68999999999999999998 89999999998888888876532 234
Q ss_pred CCCCHHHHHHHHHhcccCccccCCHHHHhcC
Q 042823 250 PSISSTAKDLVRRMLTKDPKRRITAAQVLEH 280 (477)
Q Consensus 250 ~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h 280 (477)
+.+|+++.+||.+||+.||++|||+.++++|
T Consensus 232 ~~~~~~~~~li~~cl~~dp~~Rps~~ei~~~ 262 (273)
T d1mp8a_ 232 PNCPPTLYSLMTKCWAYDPSRRPRFTELKAQ 262 (273)
T ss_dssp TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred CCCCHHHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence 6789999999999999999999999999865
|
| >d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1e-53 Score=415.27 Aligned_cols=265 Identities=24% Similarity=0.350 Sum_probs=217.9
Q ss_pred ccccccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEE
Q 042823 15 GKAYEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYE 94 (477)
Q Consensus 15 ~~~~~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~ 94 (477)
+.....+.++|++++.||+|+||+||+|+++.+|+.||||++.+.. ........+.+|+++++++ +|||||++++++.
T Consensus 10 ~~~~~~~~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~-~~~~~~~~~~~Ei~il~~l-~h~~iv~~~~~~~ 87 (348)
T d2gfsa1 10 NKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF-QSIIHAKRTYRELRLLKHM-KHENVIGLLDVFT 87 (348)
T ss_dssp SSSEEEEETTEEEEEECGGGTTSSEEEEEETTTTEEEEEEECSCTT-SSHHHHHHHHHHHHHHHHC-CCTTBCCCSEEEC
T ss_pred CCccccCCCCeEEEEEEecCCCeEEEEEEECCCCCEEEEEEECchh-cChHHHHHHHHHHHHHHhc-CCCCeeeEEEEEe
Confidence 4455667889999999999999999999999999999999997543 3344566788999999999 7999999999996
Q ss_pred eC-----CeEEEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEe
Q 042823 95 DE-----TAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVT 169 (477)
Q Consensus 95 ~~-----~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~ 169 (477)
.. ...++||+||.||+|.+++. .+++++.+++.++.||+.||.|||++||+||||||+|||+ +.++.+|++
T Consensus 88 ~~~~~~~~~~~~i~~~~~gg~L~~~~~-~~~l~e~~~~~i~~qil~aL~~LH~~giiHrDiKp~NILi---~~~~~~kl~ 163 (348)
T d2gfsa1 88 PARSLEEFNDVYLVTHLMGADLNNIVK-CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV---NEDCELKIL 163 (348)
T ss_dssp SCSSTTTCCCCEEEEECCSEEHHHHHT-TCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE---CTTCCEEEC
T ss_pred eccccccCceEEEEEeecCCchhhhcc-cccccHHHHHHHHHHHHHHHHHHHhCCCcccccCCccccc---ccccccccc
Confidence 43 33456677778999998875 4579999999999999999999999999999999999999 788899999
Q ss_pred ecCCccccCCCcceecccccccccchhhhhh--hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCCccCC--
Q 042823 170 DFGSALLFEEGQVYRDIVGSGFYIAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGEIDFD-- 245 (477)
Q Consensus 170 Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~~~~~-- 245 (477)
|||.+..... ......||+.|+|||++.+ .++.++|||||||++|+|++|.+||.+.+.......+........
T Consensus 164 dfg~a~~~~~--~~~~~~g~~~y~apE~~~~~~~~~~~~DiwSlGv~l~~ll~g~~pF~~~~~~~~~~~i~~~~~~~~~~ 241 (348)
T d2gfsa1 164 DFGLARHTDD--EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 241 (348)
T ss_dssp CC----CCTG--GGSSSCHHHHTSCHHHHTTCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHH
T ss_pred ccchhcccCc--ccccccccccccCchhhcCCccCCcccchhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChH
Confidence 9999876543 3345689999999998764 468999999999999999999999998877766666544321110
Q ss_pred ---------------------CC----CCCCCCHHHHHHHHHhcccCccccCCHHHHhcCcccCcCC
Q 042823 246 ---------------------TD----PWPSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRESG 287 (477)
Q Consensus 246 ---------------------~~----~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~~ 287 (477)
.. .++.+|+++++||.+||+.||.+|||+.|+|+||||++..
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~elL~Hp~f~~~~ 308 (348)
T d2gfsa1 242 LLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYH 308 (348)
T ss_dssp HHTTCCCHHHHHHHTTSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTTC
T ss_pred HhhhccchhhhhhhhhcccCCCcchhhhcCCCCHHHHHHHHHHCcCChhhCcCHHHHhcCHhhCCCC
Confidence 00 1246799999999999999999999999999999998654
|
| >d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-jun N-terminal kinase (jnk3s) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.9e-53 Score=413.61 Aligned_cols=259 Identities=24% Similarity=0.387 Sum_probs=204.5
Q ss_pred cccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEe----
Q 042823 20 DVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYED---- 95 (477)
Q Consensus 20 ~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~---- 95 (477)
.+.++|+++++||+|+||+||+|+++.+|+.||||++.+... .......+.+|+.++.++ +|||||+++++|..
T Consensus 14 ~i~~~Y~i~~~LG~G~fg~V~~~~d~~t~~~vAvK~i~~~~~-~~~~~~~~~~Ei~il~~l-~hpnIv~~~~~f~~~~~~ 91 (355)
T d2b1pa1 14 TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQ-NQTHAKRAYRELVLMKCV-NHKNIISLLNVFTPQKTL 91 (355)
T ss_dssp EEETTEEEEEECSCC--CEEEEEEETTTTEEEEEEEEESTTS-SHHHHHHHHHHHHHHHHC-CCTTBCCCSEEECSCCST
T ss_pred eecCCeEEEEEeecCcCeEEEEEEECCCCCEEEEEEEChhhc-CHHHHHHHHHHHHHHHhc-CCCCeeEEEEEEeccccc
Confidence 467899999999999999999999999999999999976543 344566788999999999 79999999999953
Q ss_pred --CCeEEEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCC
Q 042823 96 --ETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGS 173 (477)
Q Consensus 96 --~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~ 173 (477)
..++|+|||||.|+ +.+.+ ...+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+|++|||+
T Consensus 92 ~~~~~~~iv~Ey~~~~-l~~~~--~~~~~~~~i~~~~~qil~gl~~LH~~giiHrDlKP~Nil~---~~~~~~kl~df~~ 165 (355)
T d2b1pa1 92 EEFQDVYLVMELMDAN-LCQVI--QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGL 165 (355)
T ss_dssp TTCCEEEEEEECCSEE-HHHHH--TSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE---CTTCCEEECCCCC
T ss_pred ccCceeEEEEeccchH-HHHhh--hcCCCHHHHHHHHHHHHHHHHHhhhcccccccCCcccccc---ccccceeeechhh
Confidence 47899999999775 44544 4568999999999999999999999999999999999999 7788899999999
Q ss_pred ccccCCCcceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHHcCC-----------
Q 042823 174 ALLFEEGQVYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAILQGE----------- 241 (477)
Q Consensus 174 a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~~~~----------- 241 (477)
+............+||+.|+|||++.+ .++.++||||+||++|+|++|++||.+.+.......+....
T Consensus 166 ~~~~~~~~~~~~~~~t~~y~aPE~l~~~~~~~~~DiwSlG~~l~ell~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~ 245 (355)
T d2b1pa1 166 ARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKL 245 (355)
T ss_dssp ---------------CCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHTTS
T ss_pred hhccccccccccccccccccChhhhcCCCCCCCcccccccchHHHHhhCCCCCCCCCHHHHHHHHHHhccCCCHHHHHHh
Confidence 987776666667789999999999875 58999999999999999999999998877666555543211
Q ss_pred -----------ccCCCCCC----------------CCCCHHHHHHHHHhcccCccccCCHHHHhcCcccCcC
Q 042823 242 -----------IDFDTDPW----------------PSISSTAKDLVRRMLTKDPKRRITAAQVLEHPWLRES 286 (477)
Q Consensus 242 -----------~~~~~~~~----------------~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~ 286 (477)
.......+ ...|+++++||++||.+||++||||+|+|+||||+..
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~ta~elL~Hpw~~~~ 317 (355)
T d2b1pa1 246 QPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVW 317 (355)
T ss_dssp CHHHHHHHHTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTSTTTGGG
T ss_pred hhhHHHHhhcCccccccccccccccccccccccccccCCHHHHHHHHHHCcCChhHCcCHHHHhcCcccCCC
Confidence 11110000 1136789999999999999999999999999999863
|
| >d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Vascular endothelial growth factor receptor 2 (kdr) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7.4e-53 Score=400.14 Aligned_cols=258 Identities=21% Similarity=0.290 Sum_probs=204.1
Q ss_pred cccccccccccccccccccCCeEEEEEEEcc-----CCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEE
Q 042823 16 KAYEDVMLHYFFGRMLGRGQFGVSYLCTENS-----TNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFK 90 (477)
Q Consensus 16 ~~~~~~~~~Y~~~~~iG~G~~g~V~~~~~~~-----~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~ 90 (477)
..|+...++|++++.||+|+||.||+|.+.. +++.||+|++.... .......+.+|..++.++.+||||+.++
T Consensus 6 ~~wei~~~~y~~~~~iG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~--~~~~~~~~~~e~~~l~~~~~h~~iv~~~ 83 (299)
T d1ywna1 6 SKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA--THSEHRALMSELKILIHIGHHLNVVNLL 83 (299)
T ss_dssp HHHBCCGGGEEEEEEEEECSSCEEEEEEEESTTSSSCEEEEEEEEC------CHHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred ccccccHHHEEEeeEEeecCCeEEEEEEEcCCCcccCCeEEEEEEEcccc--CcHHHHHHHHHHHHHHhhcCCCeEEEee
Confidence 4556667899999999999999999999754 44689999986433 2344566778888888888899999999
Q ss_pred EEEEe-CCeEEEEEeccCCCchHHHHHHc----------------CCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCC
Q 042823 91 STYED-ETAVHVVMELCEGGDLFDRIIAK----------------GYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPE 153 (477)
Q Consensus 91 ~~~~~-~~~~~lv~e~~~gg~L~~~l~~~----------------~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~ 153 (477)
+++.. +..+++|||||+||+|.+++... ..+++.++..++.||+.||.|||++|||||||||+
T Consensus 84 ~~~~~~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~ivHrDlKp~ 163 (299)
T d1ywna1 84 GACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAAR 163 (299)
T ss_dssp EEECSTTSCCEEEEECCTTCBHHHHHHHTGGGBCC-----------CBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGG
T ss_pred eeeccCCCeEEEEEEecCCCcHHHHHHhccccccccccchhhhhcccCCHHHHHHHHHHHHHHHHHHHhCCCcCCcCCcc
Confidence 99865 45689999999999999999753 24789999999999999999999999999999999
Q ss_pred ceeeeecCCCCCEEEeecCCccccCCCc---ceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhC-CCCCCCC
Q 042823 154 NFSFISRDDNALLKVTDFGSALLFEEGQ---VYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSG-VPPFWAE 228 (477)
Q Consensus 154 Nil~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg-~~pf~~~ 228 (477)
|||+ +.++.+||+|||+|+...... ......||+.|+|||++.+ .++.++||||+||++|+|+|| .+||.+.
T Consensus 164 NILl---~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gvil~ellt~~~~p~~~~ 240 (299)
T d1ywna1 164 NILL---SEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV 240 (299)
T ss_dssp GEEE---CGGGCEEECC------CCSCTTSCCTTSCCCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred ceeE---CCCCcEEEccCcchhhccccccccccCceeeCccccchhHhhcCCCCcccceeehHHHHHHHHhCCCCCCCCC
Confidence 9999 778899999999998654332 2234579999999999875 589999999999999999986 5678776
Q ss_pred ChhhHHHHHHcCCccCCCCCCCCCCHHHHHHHHHhcccCccccCCHHHHhcC
Q 042823 229 TKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEH 280 (477)
Q Consensus 229 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h 280 (477)
.....+..+....... ...+.+|+++++||.+||+.||++|||+.++++|
T Consensus 241 ~~~~~~~~~~~~~~~~--~~~~~~~~~l~~li~~cl~~dP~~Rpt~~eil~~ 290 (299)
T d1ywna1 241 KIDEEFCRRLKEGTRM--RAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 290 (299)
T ss_dssp CCSHHHHHHHHHTCCC--CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred CHHHHHHHHHhcCCCC--CCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence 6555444433322222 2234689999999999999999999999999986
|
| >d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tie2 kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.8e-53 Score=402.08 Aligned_cols=250 Identities=21% Similarity=0.261 Sum_probs=211.0
Q ss_pred ccccccccccccCCeEEEEEEEccCCce--EEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEE
Q 042823 23 LHYFFGRMLGRGQFGVSYLCTENSTNRP--YACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVH 100 (477)
Q Consensus 23 ~~Y~~~~~iG~G~~g~V~~~~~~~~~~~--~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~ 100 (477)
++|++.+.||+|+||+||+|+++.++.. ||||.+.... .......+.+|+.++.++.+|||||++++++.+++.+|
T Consensus 10 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~ 87 (309)
T d1fvra_ 10 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYA--SKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLY 87 (309)
T ss_dssp GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC--------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEE
T ss_pred HHcEEEEEEeeCCCcEEEEEEECCCCeEEEEEEEEECccc--ChHHHHHHHHHHHHHHhccCCCCEeeEEEEEecCCeeE
Confidence 6899999999999999999999888875 6677664332 22345578999999999877999999999999999999
Q ss_pred EEEeccCCCchHHHHHHc----------------CCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCC
Q 042823 101 VVMELCEGGDLFDRIIAK----------------GYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNA 164 (477)
Q Consensus 101 lv~e~~~gg~L~~~l~~~----------------~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~ 164 (477)
+|||||+||+|.+++... ..+++..+..++.||+.||.|||++||+||||||+|||+ +..+
T Consensus 88 iV~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~~lH~~~iiHrDlkp~NIL~---~~~~ 164 (309)
T d1fvra_ 88 LAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILV---GENY 164 (309)
T ss_dssp EEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE---CGGG
T ss_pred EEEEecCCCcHHHHHhhccccccchhhhccccccCCCCHHHHHHHHHHHHHHHHhhhcCCccccccccceEEE---cCCC
Confidence 999999999999999754 568999999999999999999999999999999999998 7778
Q ss_pred CEEEeecCCccccCCCcceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhC-CCCCCCCChhhHHHHHHcCCc
Q 042823 165 LLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSG-VPPFWAETKKGTYDAILQGEI 242 (477)
Q Consensus 165 ~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg-~~pf~~~~~~~~~~~i~~~~~ 242 (477)
.+||+|||+|.............||+.|+|||.+.+ .|+.++|||||||++|+|++| .+||.+.+..+....+.++..
T Consensus 165 ~~kl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDvwSfGvil~ell~~~~~p~~~~~~~~~~~~i~~~~~ 244 (309)
T d1fvra_ 165 VAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYR 244 (309)
T ss_dssp CEEECCTTCEESSCEECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHGGGTCC
T ss_pred ceEEccccccccccccccccceecCCcccchHHhccCCCCccceeehhHHHHHHHHhcCCCCCCCCCHHHHHHHHHhcCC
Confidence 999999999987654444445679999999999864 689999999999999999996 567888888888877776532
Q ss_pred cCCCCCCCCCCHHHHHHHHHhcccCccccCCHHHHhcC
Q 042823 243 DFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLEH 280 (477)
Q Consensus 243 ~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h 280 (477)
...+..+|+++++||.+||+.||++|||+.++++|
T Consensus 245 ---~~~~~~~~~~~~~li~~cl~~dP~~RPs~~eil~~ 279 (309)
T d1fvra_ 245 ---LEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVS 279 (309)
T ss_dssp ---CCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred ---CCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence 22335789999999999999999999999999975
|
| >d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: epha2 receptor tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.4e-52 Score=391.73 Aligned_cols=251 Identities=20% Similarity=0.278 Sum_probs=204.1
Q ss_pred cccccccccccccccCCeEEEEEEEccCC----ceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEe
Q 042823 20 DVMLHYFFGRMLGRGQFGVSYLCTENSTN----RPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYED 95 (477)
Q Consensus 20 ~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~----~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~ 95 (477)
.-.+.|.+.+.||+|+||+||+|.++.++ ..||||++.... .......+.+|+.++.++ +|||||++++++.+
T Consensus 4 i~~~~~~~~~~iG~G~fG~Vy~~~~~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~~E~~il~~l-~H~nIv~~~g~~~~ 80 (283)
T d1mqba_ 4 IHPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGY--TEKQRVDFLGEAGIMGQF-SHHNIIRLEGVISK 80 (283)
T ss_dssp CCTTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTC--CHHHHHHHHHHHHHHHTC-CCTTBCCEEEEECS
T ss_pred CCHHHeEeeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEEECccc--ChHHHHHHHHHHHHHHhc-CCCCEeeeeEEEec
Confidence 34467999999999999999999987655 469999986443 234456788999999999 79999999999999
Q ss_pred CCeEEEEEeccCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCc
Q 042823 96 ETAVHVVMELCEGGDLFDRIIAK-GYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSA 174 (477)
Q Consensus 96 ~~~~~lv~e~~~gg~L~~~l~~~-~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a 174 (477)
...+++|||||.+|++.+.+... +.+++.++..++.||+.||.|||+++|+||||||+|||+ +.++.+||+|||+|
T Consensus 81 ~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~i~~gl~~lH~~~iiHrDlKp~NILl---~~~~~~Kl~DFGla 157 (283)
T d1mqba_ 81 YKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILV---NSNLVCKVSDFGLS 157 (283)
T ss_dssp SSSEEEEEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE---CTTCCEEECCCCC-
T ss_pred CCceEEEEEecccCcchhhhhcccccccHHHHHHHHHHHHHhhhhccccccccCccccceEEE---CCCCeEEEcccchh
Confidence 99999999999999999888765 579999999999999999999999999999999999999 78899999999999
Q ss_pred cccCCCc----ceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhC-CCCCCCCChhhHHHHHHcCCccCCCCC
Q 042823 175 LLFEEGQ----VYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSG-VPPFWAETKKGTYDAILQGEIDFDTDP 248 (477)
Q Consensus 175 ~~~~~~~----~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg-~~pf~~~~~~~~~~~i~~~~~~~~~~~ 248 (477)
+...... ......||+.|+|||++.+ .++.++|||||||++|||++| .+|+...+..+....+..+... +.
T Consensus 158 ~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~sDI~S~Gvil~el~t~~~~~~~~~~~~~~~~~i~~~~~~---~~ 234 (283)
T d1mqba_ 158 RVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGFRL---PT 234 (283)
T ss_dssp ----------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCC---CC
T ss_pred hcccCCCccceEeccCCCCccccCHHHHccCCCCCcccccccHHHHHHHHhCCCCccccCCHHHHHHHHhccCCC---CC
Confidence 8764332 1233568999999999874 689999999999999999995 5556666666666666665322 22
Q ss_pred CCCCCHHHHHHHHHhcccCccccCCHHHHhc
Q 042823 249 WPSISSTAKDLVRRMLTKDPKRRITAAQVLE 279 (477)
Q Consensus 249 ~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~ 279 (477)
...+|+.+.+||.+||+.||++|||+.++++
T Consensus 235 ~~~~~~~l~~li~~cl~~~p~~RPt~~eil~ 265 (283)
T d1mqba_ 235 PMDCPSAIYQLMMQCWQQERARRPKFADIVS 265 (283)
T ss_dssp CTTCBHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred chhhHHHHHHHHHHHCcCCHhHCcCHHHHHH
Confidence 3468999999999999999999999999975
|
| >d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Activated CDC42 kinase 1, ACK1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.9e-52 Score=390.75 Aligned_cols=250 Identities=19% Similarity=0.236 Sum_probs=202.4
Q ss_pred ccccccccccccCCeEEEEEEEcc-CC--ceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeE
Q 042823 23 LHYFFGRMLGRGQFGVSYLCTENS-TN--RPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAV 99 (477)
Q Consensus 23 ~~Y~~~~~iG~G~~g~V~~~~~~~-~~--~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~ 99 (477)
++|++.+.||+|+||.||+|++.. ++ ..||||++.+...........+.+|+.++.++ +|||||++++++.++ .+
T Consensus 8 ~d~~~~~~iG~G~fg~Vy~~~~~~~~~~~~~vAiK~l~~~~~~~~~~~~~~~~Ei~~l~~l-~H~nIv~~~g~~~~~-~~ 85 (273)
T d1u46a_ 8 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSL-DHRNLIRLYGVVLTP-PM 85 (273)
T ss_dssp GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHC-CCTTBCCEEEEECSS-SC
T ss_pred HHeEEEEEEecCCCeEEEEEEEECCCCcEEEEEEEEEChhhcCCHHHHHHHHHHHHHHHhC-CCCCEEEEEEEEeec-ch
Confidence 579999999999999999998653 33 36899998765544445567889999999999 799999999999764 67
Q ss_pred EEEEeccCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccC
Q 042823 100 HVVMELCEGGDLFDRIIAK-GYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFE 178 (477)
Q Consensus 100 ~lv~e~~~gg~L~~~l~~~-~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~ 178 (477)
++|||||++|+|.+++... +.+++..+..++.||+.||.|||++||+||||||+||++ +.++.+||+|||++....
T Consensus 86 ~lv~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~iiHrDikp~NIll---~~~~~vkl~DfGl~~~~~ 162 (273)
T d1u46a_ 86 KMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLL---ATRDLVKIGDFGLMRALP 162 (273)
T ss_dssp EEEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEE---EETTEEEECCCTTCEECC
T ss_pred heeeeeecCcchhhhhhcccCCCCHHHHHHHHHHHHHHHHHhhhCCEeeeeecHHHhcc---ccccceeeccchhhhhcc
Confidence 8999999999999887654 569999999999999999999999999999999999999 556789999999998765
Q ss_pred CCcc----eecccccccccchhhhhh-hcCCccchHhHHHHHHHHhh-CCCCCCCCChhhHHHHHHcCCccCCCCCCCCC
Q 042823 179 EGQV----YRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQGEIDFDTDPWPSI 252 (477)
Q Consensus 179 ~~~~----~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~t-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 252 (477)
.... .....||+.|+|||++.+ .++.++|||||||++|||+| |.+||.+.+..+....+.+.....+ .++.+
T Consensus 163 ~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~S~Gvil~emlt~G~~Pf~~~~~~~~~~~i~~~~~~~~--~~~~~ 240 (273)
T d1u46a_ 163 QNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLP--RPEDC 240 (273)
T ss_dssp C-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTSCCCCC--CCTTC
T ss_pred cCCCcceecCccccCcccCCHHHHhCCCCCcchhhhhhHHHHHHHHhCCCCCCCCcCHHHHHHHHHhCCCCCC--Ccccc
Confidence 4322 123457889999999875 58899999999999999998 8999999999888888877654433 33578
Q ss_pred CHHHHHHHHHhcccCccccCCHHHHhc
Q 042823 253 SSTAKDLVRRMLTKDPKRRITAAQVLE 279 (477)
Q Consensus 253 ~~~~~~li~~~l~~dp~~R~s~~~~l~ 279 (477)
|+.+++||.+||+.||++|||+.++++
T Consensus 241 ~~~l~~li~~cl~~dp~~RPt~~ei~~ 267 (273)
T d1u46a_ 241 PQDIYNVMVQCWAHKPEDRPTFVALRD 267 (273)
T ss_dssp CHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred cHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence 999999999999999999999999863
|
| >d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fibroblast growth factor receptor 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.6e-52 Score=392.90 Aligned_cols=254 Identities=20% Similarity=0.310 Sum_probs=213.2
Q ss_pred cccccccccccccccccCCeEEEEEEEccCC-------ceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEE
Q 042823 18 YEDVMLHYFFGRMLGRGQFGVSYLCTENSTN-------RPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFK 90 (477)
Q Consensus 18 ~~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~-------~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~ 90 (477)
++...++|++++.||+|+||.||+|++..++ ..||+|++.+.. .......+.+|...+.++.+|||||+++
T Consensus 8 ~~i~~~~~~l~~~iG~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~~e~~~l~~~~~HpnIv~~~ 85 (299)
T d1fgka_ 8 WELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDA--TEKDLSDLISEMEMMKMIGKHKNIINLL 85 (299)
T ss_dssp TBCCGGGEEEEEECC-----CEEEEEEECC----CCCEEEEEEECCCTTC--CHHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred CcccHHHeEEeeEEeecCCcEEEEEEEcCCCcccccCceEEEEEEECccc--ChHHHHHHHHHHHHHHHhcCCCeEEecc
Confidence 5566789999999999999999999976554 479999986543 3345677888999999987899999999
Q ss_pred EEEEeCCeEEEEEeccCCCchHHHHHHc----------------CCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCc
Q 042823 91 STYEDETAVHVVMELCEGGDLFDRIIAK----------------GYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPEN 154 (477)
Q Consensus 91 ~~~~~~~~~~lv~e~~~gg~L~~~l~~~----------------~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~N 154 (477)
+++.+++.+|+|||||++|+|.+++... ..+++.++..++.||+.||.|||++|||||||||+|
T Consensus 86 ~~~~~~~~~~~v~e~~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~ylH~~~ivHrDiKp~N 165 (299)
T d1fgka_ 86 GACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARN 165 (299)
T ss_dssp EEECSSSSCEEEECCCTTCBHHHHHHTTSCC------------CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGG
T ss_pred cccccCCeEEEEEEccCCCcHHHHHHhhcCCccccccccccCccccCCHHHHHHHHHHHHHHHHHhhhCCEEeeeecccc
Confidence 9999999999999999999999999754 358999999999999999999999999999999999
Q ss_pred eeeeecCCCCCEEEeecCCccccCCCc---ceecccccccccchhhhh-hhcCCccchHhHHHHHHHHhh-CCCCCCCCC
Q 042823 155 FSFISRDDNALLKVTDFGSALLFEEGQ---VYRDIVGSGFYIAPEVLR-RRYGKEIDIWSAGVILYILLS-GVPPFWAET 229 (477)
Q Consensus 155 il~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~l~t-g~~pf~~~~ 229 (477)
||+ +.++.+||+|||++....... ......||+.|+|||++. +.|+.++|||||||++|+|++ |.+||.+.+
T Consensus 166 iLl---~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~y~~k~DiwS~Gvvl~ell~~g~~p~~~~~ 242 (299)
T d1fgka_ 166 VLV---TEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVP 242 (299)
T ss_dssp EEE---CTTCCEEECSTTCCCCGGGCCTTCCCTTSCCGGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC
T ss_pred eee---cCCCCeEeccchhhccccccccccccccCCCChhhhhhhHhcCCCCCchhhhHHhHHHHHHhccCCCCCCCCCC
Confidence 999 788899999999998764432 223467899999999986 579999999999999999998 799998888
Q ss_pred hhhHHHHHHcCCccCCCCCCCCCCHHHHHHHHHhcccCccccCCHHHHhc
Q 042823 230 KKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLE 279 (477)
Q Consensus 230 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~ 279 (477)
.......+..+... ...+.+|+++++||.+||+.||++|||+.++++
T Consensus 243 ~~~~~~~i~~~~~~---~~p~~~~~~l~~li~~cl~~dP~~Rps~~eil~ 289 (299)
T d1fgka_ 243 VEELFKLLKEGHRM---DKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVE 289 (299)
T ss_dssp HHHHHHHHHTTCCC---CCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHHHHHHcCCCC---CCCccchHHHHHHHHHHccCCHhHCcCHHHHHH
Confidence 88777777665322 223468999999999999999999999999976
|
| >d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Carboxyl-terminal src kinase (csk) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.1e-52 Score=387.43 Aligned_cols=247 Identities=21% Similarity=0.279 Sum_probs=204.4
Q ss_pred cccccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEE-eC
Q 042823 18 YEDVMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYE-DE 96 (477)
Q Consensus 18 ~~~~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~-~~ 96 (477)
|+.-.++|++++.||+|+||.||+|.+ +|+.||||++.+.. ..+.+.+|+.+++++ +||||+++++++. .+
T Consensus 2 w~i~~~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~i~~~~-----~~~~~~~E~~~l~~l-~HpnIv~~~g~~~~~~ 73 (262)
T d1byga_ 2 WALNMKELKLLQTIGKGEFGDVMLGDY--RGNKVAVKCIKNDA-----TAQAFLAEASVMTQL-RHSNLVQLLGVIVEEK 73 (262)
T ss_dssp CBCCGGGEEEEEEEEECSSCEEEEEEE--TTEEEEEEECCCCC-------HHHHHTHHHHTTC-CCTTBCCEEEEECCC-
T ss_pred CccCHHHeEEeEEEecCCCeEEEEEEE--CCeEEEEEEECcHH-----HHHHHHHHHHHHHhC-CCCCEeeEEEEEEecC
Confidence 345567899999999999999999998 47899999986432 345688999999999 7999999999985 45
Q ss_pred CeEEEEEeccCCCchHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCc
Q 042823 97 TAVHVVMELCEGGDLFDRIIAKG--YNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSA 174 (477)
Q Consensus 97 ~~~~lv~e~~~gg~L~~~l~~~~--~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a 174 (477)
+.+|+|||||++|+|.+++...+ .+++..+..++.||+.||.|||+++|+||||||+||++ +.++.+||+|||++
T Consensus 74 ~~~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~al~ylH~~~ivH~dlkp~Nil~---~~~~~~kl~dfg~s 150 (262)
T d1byga_ 74 GGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLV---SEDNVAKVSDFGLT 150 (262)
T ss_dssp -CCEEEECCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE---CTTSCEEECCCCC-
T ss_pred CcEEEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHhhccccccCceeccccchHhhee---cCCCCEeecccccc
Confidence 67899999999999999997643 48999999999999999999999999999999999999 78899999999999
Q ss_pred cccCCCcceecccccccccchhhhh-hhcCCccchHhHHHHHHHHhh-CCCCCCCCChhhHHHHHHcCCccCCCCCCCCC
Q 042823 175 LLFEEGQVYRDIVGSGFYIAPEVLR-RRYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQGEIDFDTDPWPSI 252 (477)
Q Consensus 175 ~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~l~t-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 252 (477)
....... ....+|+.|+|||++. +.++.++|||||||++|||+| |.+||...+..+....+.++... +..+.+
T Consensus 151 ~~~~~~~--~~~~~~~~y~aPE~l~~~~~t~~sDIwSfG~il~el~t~~~~p~~~~~~~~~~~~i~~~~~~---~~~~~~ 225 (262)
T d1byga_ 151 KEASSTQ--DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKM---DAPDGC 225 (262)
T ss_dssp -------------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHHHHHTTTCCC---CCCTTC
T ss_pred eecCCCC--ccccccccCCChHHHhCCCCChHHHHHhHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCCC---CCCccC
Confidence 8754432 3457899999999986 569999999999999999998 79999988888888888765332 223468
Q ss_pred CHHHHHHHHHhcccCccccCCHHHHhcC
Q 042823 253 SSTAKDLVRRMLTKDPKRRITAAQVLEH 280 (477)
Q Consensus 253 ~~~~~~li~~~l~~dp~~R~s~~~~l~h 280 (477)
++++++||.+||..||.+|||+.+++++
T Consensus 226 ~~~~~~li~~cl~~dP~~Rps~~~l~~~ 253 (262)
T d1byga_ 226 PPAVYEVMKNCWHLDAAMRPSFLQLREQ 253 (262)
T ss_dssp CHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred CHHHHHHHHHHcccCHhHCcCHHHHHHH
Confidence 8999999999999999999999999763
|
| >d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: EGF receptor tyrosine kinase, Erbb-1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.4e-52 Score=396.79 Aligned_cols=248 Identities=20% Similarity=0.235 Sum_probs=205.4
Q ss_pred ccccccccccccCCeEEEEEEEccCCc----eEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCe
Q 042823 23 LHYFFGRMLGRGQFGVSYLCTENSTNR----PYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETA 98 (477)
Q Consensus 23 ~~Y~~~~~iG~G~~g~V~~~~~~~~~~----~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~ 98 (477)
++|++++.||+|+||+||+|.+..+|+ +||+|.+.... .......+.+|+.++.++ +|||||++++++.++ .
T Consensus 9 ~dy~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l-~HpnIv~l~g~~~~~-~ 84 (317)
T d1xkka_ 9 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT--SPKANKEILDEAYVMASV-DNPHVCRLLGICLTS-T 84 (317)
T ss_dssp TTEEEEEEEEECSSEEEEEEEECC----CCEEEEEEEECC------CTHHHHHHHHHHHHHC-CCTTBCCEEEEEESS-S
T ss_pred HHCEEeeEEecCCCeEEEEEEEcCCCCEEEEEEEEEEecccc--CHHHHHHHHHHHHHHHhC-CCCCEeeEEEEEecC-C
Confidence 369999999999999999999988876 57777765332 233456789999999999 799999999999865 5
Q ss_pred EEEEEeccCCCchHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCcccc
Q 042823 99 VHVVMELCEGGDLFDRIIAK-GYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLF 177 (477)
Q Consensus 99 ~~lv~e~~~gg~L~~~l~~~-~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~ 177 (477)
.++++||+.+|+|.+.+... ..+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+|...
T Consensus 85 ~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~gl~yLH~~~iiHrDlKp~NIll---~~~~~~kl~DFGla~~~ 161 (317)
T d1xkka_ 85 VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLV---KTPQHVKITDFGLAKLL 161 (317)
T ss_dssp EEEEEECCTTCBHHHHHHHTSSSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE---EETTEEEECCCSHHHHT
T ss_pred eeEEEEeccCCcccccccccccCCCHHHHHHHHHHHHHHHHHHHHcCcccCcchhhccee---CCCCCeEeeccccceec
Confidence 67888999999999888764 578999999999999999999999999999999999999 66788999999999876
Q ss_pred CCCcc---eecccccccccchhhhhh-hcCCccchHhHHHHHHHHhh-CCCCCCCCChhhHHHHHHcCCccCCCCCCCCC
Q 042823 178 EEGQV---YRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLS-GVPPFWAETKKGTYDAILQGEIDFDTDPWPSI 252 (477)
Q Consensus 178 ~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~t-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 252 (477)
..... .....||+.|+|||++.+ .|+.++|||||||++|||+| |.+||.+.+..+....+..+... +..+.+
T Consensus 162 ~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDvwS~Gvil~el~t~g~~p~~~~~~~~~~~~i~~~~~~---~~p~~~ 238 (317)
T d1xkka_ 162 GAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERL---PQPPIC 238 (317)
T ss_dssp TTTCC--------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCGGGHHHHHHHTCCC---CCCTTB
T ss_pred ccccccccccccccCccccChHHHhcCCCChhhhhhhHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCCC---CCCccc
Confidence 44322 233468999999999864 68999999999999999998 89999888888877777765432 222568
Q ss_pred CHHHHHHHHHhcccCccccCCHHHHhcC
Q 042823 253 SSTAKDLVRRMLTKDPKRRITAAQVLEH 280 (477)
Q Consensus 253 ~~~~~~li~~~l~~dp~~R~s~~~~l~h 280 (477)
|+++.+|+.+||+.||++|||+.++++|
T Consensus 239 ~~~~~~li~~cl~~dP~~RPs~~eil~~ 266 (317)
T d1xkka_ 239 TIDVYMIMVKCWMIDADSRPKFRELIIE 266 (317)
T ss_dssp CHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred CHHHHHHHHHhCCCChhhCcCHHHHHHH
Confidence 9999999999999999999999999987
|
| >d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Musk tyrosine kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=1.6e-51 Score=390.71 Aligned_cols=253 Identities=19% Similarity=0.250 Sum_probs=216.1
Q ss_pred cccccccccccccccccCCeEEEEEEEc-----cCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEE
Q 042823 18 YEDVMLHYFFGRMLGRGQFGVSYLCTEN-----STNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKST 92 (477)
Q Consensus 18 ~~~~~~~Y~~~~~iG~G~~g~V~~~~~~-----~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~ 92 (477)
.+...++|++++.||+|+||+||+|+++ .+++.||||++.... .......+.+|+.++.++ +||||++++++
T Consensus 8 ~e~p~~~~~~~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~~--~~~~~~~~~~E~~il~~l-~h~niv~~~~~ 84 (301)
T d1lufa_ 8 LEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEA--SADMQADFQREAALMAEF-DNPNIVKLLGV 84 (301)
T ss_dssp TBCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTC--CHHHHHHHHHHHHHHHTC-CCTTBCCEEEE
T ss_pred ccCCHHHcEEeEEEeeCCCeEEEEEEECCCccCCCCeEEEEEEEChhc--ChHHHHHHHHHHHHHHhc-CCCCcccceee
Confidence 3445678999999999999999999875 356789999986433 334567789999999999 79999999999
Q ss_pred EEeCCeEEEEEeccCCCchHHHHHHcC------------------------CCCHHHHHHHHHHHHHHHHHHHHcCCeec
Q 042823 93 YEDETAVHVVMELCEGGDLFDRIIAKG------------------------YNSERDAATVLRAIVNAVNVCHSMGVMHR 148 (477)
Q Consensus 93 ~~~~~~~~lv~e~~~gg~L~~~l~~~~------------------------~~~~~~~~~i~~qil~~L~~lH~~~ivH~ 148 (477)
+......++||||+++|+|.+++.... .++...+..++.|++.||.|||+++||||
T Consensus 85 ~~~~~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~ylH~~~ivHr 164 (301)
T d1lufa_ 85 CAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHR 164 (301)
T ss_dssp ECSSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCS
T ss_pred eccCCceEEEEEecCCCcHHHHHHhcCccccccccccccchhhhccccCCCCCCHHHHHHHHHHHHHHhhhcccCCeEee
Confidence 999999999999999999999997532 37888999999999999999999999999
Q ss_pred cCCCCceeeeecCCCCCEEEeecCCccccCCCc---ceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCC-C
Q 042823 149 DLKPENFSFISRDDNALLKVTDFGSALLFEEGQ---VYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGV-P 223 (477)
Q Consensus 149 dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~-~ 223 (477)
||||+|||+ +.++.+||+|||+|....... ......||+.|+|||++.+ .|+.++|||||||++|||++|. +
T Consensus 165 DlKp~NILl---d~~~~~Kl~DFGls~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~t~ksDVwS~Gvvl~ell~~~~~ 241 (301)
T d1lufa_ 165 DLATRNCLV---GENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQ 241 (301)
T ss_dssp CCSGGGEEE---CGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCC
T ss_pred EEcccceEE---CCCCcEEEccchhheeccCCccccccCCCCcCcCcCCHHHHccCCCChhhhhccchhhHHHHHccCCC
Confidence 999999999 778899999999997654332 2234578999999999875 6999999999999999999984 7
Q ss_pred CCCCCChhhHHHHHHcCCccCCCCCCCCCCHHHHHHHHHhcccCccccCCHHHHhc
Q 042823 224 PFWAETKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLE 279 (477)
Q Consensus 224 pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~ 279 (477)
||.+.+..+....+..+... +..+.+|+++.+||.+||+.||++|||+.|+++
T Consensus 242 p~~~~~~~e~~~~v~~~~~~---~~p~~~~~~~~~li~~cl~~~P~~RPt~~ev~~ 294 (301)
T d1lufa_ 242 PYYGMAHEEVIYYVRDGNIL---ACPENCPLELYNLMRLCWSKLPADRPSFCSIHR 294 (301)
T ss_dssp TTTTSCHHHHHHHHHTTCCC---CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred CCCCCCHHHHHHHHHcCCCC---CCCccchHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence 89888888888888877542 223478999999999999999999999999964
|
| >d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-KIT receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.4e-51 Score=389.43 Aligned_cols=256 Identities=22% Similarity=0.322 Sum_probs=216.7
Q ss_pred ccccccccccccccccccCCeEEEEEEEc-----cCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEE
Q 042823 17 AYEDVMLHYFFGRMLGRGQFGVSYLCTEN-----STNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKS 91 (477)
Q Consensus 17 ~~~~~~~~Y~~~~~iG~G~~g~V~~~~~~-----~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~ 91 (477)
.|+...++|++++.||+|+||.||+|++. .+++.||||++.... .......+.+|+.++..+.+|||||++++
T Consensus 17 ~~~~~~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~~--~~~~~~~~~~E~~~~~~l~~HpnIv~~~g 94 (311)
T d1t46a_ 17 KWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSA--HLTEREALMSELKVLSYLGNHMNIVNLLG 94 (311)
T ss_dssp GGBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC--CHHHHHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred cccCCHHHeEEeeEEeecCCeEEEEEEEeccccCCCCeEEEEEEECccc--CHHHHHHHHHHHHHHHhccCCCCEEEEEE
Confidence 56666789999999999999999999863 466789999986543 34456678899999999978999999999
Q ss_pred EEEeCCeEEEEEeccCCCchHHHHHHcC------------------CCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCC
Q 042823 92 TYEDETAVHVVMELCEGGDLFDRIIAKG------------------YNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPE 153 (477)
Q Consensus 92 ~~~~~~~~~lv~e~~~gg~L~~~l~~~~------------------~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~ 153 (477)
++.+...+|+|||||+||+|.+++.... .+++..+..++.||+.||.|||++|+|||||||+
T Consensus 95 ~~~~~~~~~lvmE~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~~LH~~~ivHrDLKp~ 174 (311)
T d1t46a_ 95 ACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAAR 174 (311)
T ss_dssp EECSSSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGG
T ss_pred EEeeCCEEEEEEEcCCCCCHHHHHHhccccccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCeeecccccc
Confidence 9999999999999999999999997643 5889999999999999999999999999999999
Q ss_pred ceeeeecCCCCCEEEeecCCccccCCCcc---eecccccccccchhhhh-hhcCCccchHhHHHHHHHHhh-CCCCCCCC
Q 042823 154 NFSFISRDDNALLKVTDFGSALLFEEGQV---YRDIVGSGFYIAPEVLR-RRYGKEIDIWSAGVILYILLS-GVPPFWAE 228 (477)
Q Consensus 154 Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~l~t-g~~pf~~~ 228 (477)
||++ +..+.+|++|||.+........ .....||+.|+|||++. +.++.++|||||||++|+|+| |.+||...
T Consensus 175 NIl~---~~~~~~ki~DfG~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwS~G~~l~ellt~g~p~~~~~ 251 (311)
T d1t46a_ 175 NILL---THGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGM 251 (311)
T ss_dssp GEEE---ETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTC
T ss_pred cccc---cccCcccccccchheeccCCCcceEeeecccChHHcCHHHhcCCCCCCcccccchHHHHHHHHhCCCCCCCCC
Confidence 9999 6788999999999987654322 23457899999999987 468999999999999999998 67777776
Q ss_pred ChhhHHHHHHcCCccCCCCCCCCCCHHHHHHHHHhcccCccccCCHHHHhc
Q 042823 229 TKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLE 279 (477)
Q Consensus 229 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~ 279 (477)
+....+..+........ ....+|+++.+||.+||+.||++|||+.++++
T Consensus 252 ~~~~~~~~~i~~~~~~~--~~~~~~~~l~~Li~~cl~~dP~~RPs~~~il~ 300 (311)
T d1t46a_ 252 PVDSKFYKMIKEGFRML--SPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQ 300 (311)
T ss_dssp CSSHHHHHHHHHTCCCC--CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred CHHHHHHHHHhcCCCCC--CcccccHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence 66666655554433222 22467999999999999999999999999985
|
| >d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Insulin-like growth factor 1 receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.8e-51 Score=388.38 Aligned_cols=262 Identities=19% Similarity=0.251 Sum_probs=223.4
Q ss_pred CCCCccccccccccccccccccccccCCeEEEEEEEcc-----CCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCC
Q 042823 9 QRDPILGKAYEDVMLHYFFGRMLGRGQFGVSYLCTENS-----TNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQ 83 (477)
Q Consensus 9 ~~~~~~~~~~~~~~~~Y~~~~~iG~G~~g~V~~~~~~~-----~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~h 83 (477)
+.+.++-..++...++|.+++.||+|+||+||+|.++. ++..||||++.+.. .......+.+|+.++.++ +|
T Consensus 6 ~~~~~~~~~~ei~~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~~--~~~~~~~~~~E~~il~~l-~h 82 (308)
T d1p4oa_ 6 AADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAA--SMRERIEFLNEASVMKEF-NC 82 (308)
T ss_dssp CCSCCCCCTTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTS--CHHHHHHHHHHHHHGGGC-CC
T ss_pred cccCcCccceeecHHHeEEeeEEeeCCCeEEEEEEECCcccCCCCcEEEEEEECccc--ChHHHHHHHHHHHHHHHc-CC
Confidence 34555666677788999999999999999999998853 35789999986443 334556788999999999 79
Q ss_pred CCeeEEEEEEEeCCeEEEEEeccCCCchHHHHHHc----------CCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCC
Q 042823 84 PNVVEFKSTYEDETAVHVVMELCEGGDLFDRIIAK----------GYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPE 153 (477)
Q Consensus 84 pniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~----------~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~ 153 (477)
||||++++++..+...++|||||++|+|.+++... ..++...+..++.|++.||.|||+++|+||||||+
T Consensus 83 ~nIv~~~~~~~~~~~~~lv~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~gl~~LH~~~ivHrDlk~~ 162 (308)
T d1p4oa_ 83 HHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAAR 162 (308)
T ss_dssp TTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCSGG
T ss_pred CCEeeeeeEEecCCceeEEEeecCCCCHHHHHHhcccccccccccCCCCHHHHHHHHHHHHHHHHHHhhCCeeeceEcCC
Confidence 99999999999999999999999999999998643 24688899999999999999999999999999999
Q ss_pred ceeeeecCCCCCEEEeecCCccccCCCcc---eecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhC-CCCCCCC
Q 042823 154 NFSFISRDDNALLKVTDFGSALLFEEGQV---YRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSG-VPPFWAE 228 (477)
Q Consensus 154 Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg-~~pf~~~ 228 (477)
|||+ +.++.+||+|||+|........ .....||+.|+|||.+.+ .++.++|||||||++|||+|| .+||.+.
T Consensus 163 NiLl---d~~~~~Kl~DFGla~~~~~~~~~~~~~~~~~t~~y~aPe~l~~~~~~~~~Dv~S~G~il~El~t~~~~p~~~~ 239 (308)
T d1p4oa_ 163 NCMV---AEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGL 239 (308)
T ss_dssp GEEE---CTTCCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTS
T ss_pred ceee---cCCceEEEeecccceeccCCcceeeccceecccccCCHHHHccCCCCcccccccHHHHHHHHHhCCCCCCCCC
Confidence 9999 7889999999999986644322 233468999999999875 588899999999999999998 5888888
Q ss_pred ChhhHHHHHHcCCccCCCCCCCCCCHHHHHHHHHhcccCccccCCHHHHhc
Q 042823 229 TKKGTYDAILQGEIDFDTDPWPSISSTAKDLVRRMLTKDPKRRITAAQVLE 279 (477)
Q Consensus 229 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~ 279 (477)
+..+.+..+.++.... ..+.+|+.+.++|.+||+.||++|||+.++++
T Consensus 240 ~~~~~~~~i~~~~~~~---~p~~~~~~l~~li~~cl~~~P~~RPs~~~il~ 287 (308)
T d1p4oa_ 240 SNEQVLRFVMEGGLLD---KPDNCPDMLFELMRMCWQYNPKMRPSFLEIIS 287 (308)
T ss_dssp CHHHHHHHHHTTCCCC---CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred CHHHHHHHHHhCCCCC---CcccchHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence 8888888887765422 22578999999999999999999999999987
|
| >d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=7.1e-51 Score=386.55 Aligned_cols=259 Identities=19% Similarity=0.216 Sum_probs=206.5
Q ss_pred ccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEE
Q 042823 21 VMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVH 100 (477)
Q Consensus 21 ~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~ 100 (477)
+-++|++++.||+|+||+||+|+++.+|+.||||++...... ..+.+|+++++.+.+|++|+.+..++.+....+
T Consensus 5 vg~rY~l~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~-----~~~~~E~~i~~~l~~~~~i~~~~~~~~~~~~~~ 79 (299)
T d1ckia_ 5 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH-----PQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNV 79 (299)
T ss_dssp ETTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEESCTTS-----CCHHHHHHHHHHSTTSTTCCCEEEEEEETTEEE
T ss_pred ECCEEEEeEEEeeCCCcEEEEEEECCCCCEEEEEEEchhccC-----HHHHHHHHHHHHccCCCcccEEEEEEecCCEEE
Confidence 446899999999999999999999999999999998754322 246789999999976667778888889999999
Q ss_pred EEEeccCCCchHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCC
Q 042823 101 VVMELCEGGDLFDRIIA-KGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEE 179 (477)
Q Consensus 101 lv~e~~~gg~L~~~l~~-~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~ 179 (477)
+|||||.+ +|.+.+.. .+.+++..+..++.|++.||.|||++||+||||||+|||+...+.+..+||+|||+|.....
T Consensus 80 ivme~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDiKp~NIl~~~~~~~~~vkl~DFG~a~~~~~ 158 (299)
T d1ckia_ 80 MVMELLGP-SLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRD 158 (299)
T ss_dssp EEEECCCC-BHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECCGGGTTCEEECCCSSCEECBC
T ss_pred EEEEEcCC-chhhhhhhccCCCcHHHHHHHHHHHHHHHHHHHHCCeeeccCCHhhccccccCCCceeeeeccCcceeccc
Confidence 99999955 66666554 56799999999999999999999999999999999999986666778899999999987643
Q ss_pred Cc--------ceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChhhHHHHHH---cCCccCC-C
Q 042823 180 GQ--------VYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKGTYDAIL---QGEIDFD-T 246 (477)
Q Consensus 180 ~~--------~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~~~~i~---~~~~~~~-~ 246 (477)
.. ......||+.|+|||++.+ .++.++|||||||++|+|+||.+||...........+. ......+ .
T Consensus 159 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (299)
T d1ckia_ 159 ARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIE 238 (299)
T ss_dssp TTTCCBCCCCBCCSCCCCSSSCCHHHHTTBCCCHHHHHHHHHHHHHHHHHSSCTTCCCC-------HHHHHHHHHHSCHH
T ss_pred cccccceeccccCCcCCCccccCHHHHhCCCCCChhhEEecCHHHHHHHhCCCcccccchHHHHHHHHHhhcccCCCChh
Confidence 22 1234589999999999976 58999999999999999999999998765544333221 1111111 1
Q ss_pred CCCCCCCHHHHHHHHHhcccCccccCCHHH---HhcCcccCc
Q 042823 247 DPWPSISSTAKDLVRRMLTKDPKRRITAAQ---VLEHPWLRE 285 (477)
Q Consensus 247 ~~~~~~~~~~~~li~~~l~~dp~~R~s~~~---~l~h~~~~~ 285 (477)
...+.+|+++.+||.+||+.+|++||++.+ +|+|+|.+.
T Consensus 239 ~~~~~~p~~~~~li~~cl~~~p~~RP~~~~i~~~l~~~~~~~ 280 (299)
T d1ckia_ 239 VLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQ 280 (299)
T ss_dssp HHTTTSCHHHHHHHHHHHHSCTTCCCCHHHHHHHHHHHHHHH
T ss_pred HhccCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHHHc
Confidence 123568999999999999999999999875 466776544
|
| >d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Hepatocyte growth factor receptor, c-MET species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.6e-49 Score=373.39 Aligned_cols=245 Identities=22% Similarity=0.285 Sum_probs=199.8
Q ss_pred ccccccccCCeEEEEEEEccCC---ceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEe-CCeEEEE
Q 042823 27 FGRMLGRGQFGVSYLCTENSTN---RPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYED-ETAVHVV 102 (477)
Q Consensus 27 ~~~~iG~G~~g~V~~~~~~~~~---~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~-~~~~~lv 102 (477)
+.++||+|+||+||+|++..++ ..||||++.+. ........+.+|+.++.++ +|||||++++++.. ++.+++|
T Consensus 31 ~~~~iG~G~fg~Vyk~~~~~~~~~~~~vAvK~~~~~--~~~~~~~~~~~E~~~l~~l-~HpnIv~~~g~~~~~~~~~~lv 107 (311)
T d1r0pa_ 31 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI--TDIGEVSQFLTEGIIMKDF-SHPNVLSLLGICLRSEGSPLVV 107 (311)
T ss_dssp EEEEEEEETTEEEEEEEECC----CEEEEEEEECCC--CCHHHHHHHHHHHHHHHTC-CCTTBCCCCEEEEETTTEEEEE
T ss_pred cceEEeecCCeEEEEEEEECCCCEEEEEEEEEECcc--cCHHHHHHHHHHHHHHHhC-CCCCEeEEeEEEEecCCceEEE
Confidence 3678999999999999986543 35899998643 2345567899999999999 79999999999765 5689999
Q ss_pred EeccCCCchHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEeecCCccccCCCc
Q 042823 103 MELCEGGDLFDRIIAKG-YNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVTDFGSALLFEEGQ 181 (477)
Q Consensus 103 ~e~~~gg~L~~~l~~~~-~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~ 181 (477)
||||++|+|.+++.... ..+...+..++.|++.||.|||+.+|+||||||+|||+ +.++.+||+|||+++......
T Consensus 108 ~E~~~~g~l~~~~~~~~~~~~~~~~~~i~~qia~gL~~lH~~~iiHrDLK~~NILl---~~~~~~kL~DFG~~~~~~~~~ 184 (311)
T d1r0pa_ 108 LPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCML---DEKFTVKVADFGLARDMYDKE 184 (311)
T ss_dssp EECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE---CTTCCEEECSSGGGCCTTTTT
T ss_pred EEEeecCchhhhhccccccchHHHHHHHHHHHHHhhhhhcccCcccCCccHHhEeE---CCCCCEEEecccchhhccccc
Confidence 99999999999887544 56788899999999999999999999999999999999 788899999999998764432
Q ss_pred c-----eecccccccccchhhhh-hhcCCccchHhHHHHHHHHhhCCCCCCCC-ChhhHHHHHHcCCccCCCCCCCCCCH
Q 042823 182 V-----YRDIVGSGFYIAPEVLR-RRYGKEIDIWSAGVILYILLSGVPPFWAE-TKKGTYDAILQGEIDFDTDPWPSISS 254 (477)
Q Consensus 182 ~-----~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~l~tg~~pf~~~-~~~~~~~~i~~~~~~~~~~~~~~~~~ 254 (477)
. .....||+.|+|||.+. +.++.++||||||+++|||+||..||... +..+....+..+..... .+.+++
T Consensus 185 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDI~SfGivl~El~t~~~p~~~~~~~~~~~~~i~~g~~~~~---p~~~~~ 261 (311)
T d1r0pa_ 185 FDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQ---PEYCPD 261 (311)
T ss_dssp CCCTTCTTCSSCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCC------CHHHHHTTCCCCC---CTTCCH
T ss_pred cccceecccccccccccChHHHhcCCCCChhHhhhhHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCCCCC---cccCcH
Confidence 2 12346899999999986 57999999999999999999977776543 34445556666543322 246789
Q ss_pred HHHHHHHHhcccCccccCCHHHHhcC
Q 042823 255 TAKDLVRRMLTKDPKRRITAAQVLEH 280 (477)
Q Consensus 255 ~~~~li~~~l~~dp~~R~s~~~~l~h 280 (477)
++.+||.+||+.||++|||+.|+++|
T Consensus 262 ~l~~li~~cl~~dP~~RPs~~ei~~~ 287 (311)
T d1r0pa_ 262 PLYEVMLKCWHPKAEMRPSFSELVSR 287 (311)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence 99999999999999999999999876
|
| >d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Probab=100.00 E-value=6.3e-49 Score=371.19 Aligned_cols=252 Identities=19% Similarity=0.258 Sum_probs=206.4
Q ss_pred ccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEE
Q 042823 21 VMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVH 100 (477)
Q Consensus 21 ~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~ 100 (477)
+.++|++++.||+|+||+||+|+++.+|+.||||++..... ...+.+|++++..+.+|||++.+++++......|
T Consensus 3 ig~~Y~i~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~-----~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~ 77 (293)
T d1csna_ 3 VGVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSD-----APQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNV 77 (293)
T ss_dssp ETTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTT-----SCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEE
T ss_pred CCCceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEccccC-----cHHHHHHHHHHHHhcCCCCCCEEEEEeecCCccE
Confidence 45789999999999999999999999999999998865432 2346788899999977799999999999999999
Q ss_pred EEEeccCCCchHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecC--CCCCEEEeecCCcccc
Q 042823 101 VVMELCEGGDLFDRIIAKG-YNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRD--DNALLKVTDFGSALLF 177 (477)
Q Consensus 101 lv~e~~~gg~L~~~l~~~~-~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~--~~~~~kl~Dfg~a~~~ 177 (477)
+||||| |++|.+++...+ .++...+..++.|++.||.|||++||+||||||+||++.... ..+.+||+|||+|+..
T Consensus 78 ~vme~~-~~~l~~~~~~~~~~~~~~~~~~i~~q~~~~l~~lH~~giiHrDiKp~Nili~~~~~~~~~~vkl~DFG~a~~~ 156 (293)
T d1csna_ 78 LVIDLL-GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFY 156 (293)
T ss_dssp EEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEES
T ss_pred EEEEec-CCCHHHHHHhhccchhhHHHHHHHHHHHHHHHHHHHCCceeccCCccceeecCcccccCCceEEcccceeEEc
Confidence 999999 679999887754 699999999999999999999999999999999999995422 3568999999999875
Q ss_pred CCC--------cceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChhhH---HHHHHcCCccCC
Q 042823 178 EEG--------QVYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKKGT---YDAILQGEIDFD 245 (477)
Q Consensus 178 ~~~--------~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~~~---~~~i~~~~~~~~ 245 (477)
... ......+||+.|||||++.+ .++.++|||||||++|+|+||..||.+...... ...+.......+
T Consensus 157 ~~~~~~~~~~~~~~~~~~GT~~y~aPE~~~~~~~~~~~DiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~i~~~~~~~~ 236 (293)
T d1csna_ 157 RDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTP 236 (293)
T ss_dssp BCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHSC
T ss_pred ccCccccceeecccCceEEchhhcCHHHhcCCCCChHHHHHHhhHHHHHHHhCCCcCCCccchhHHHHHHHHHhccCCCC
Confidence 432 12234679999999999976 589999999999999999999999976544322 223322211111
Q ss_pred -CCCCCCCCHHHHHHHHHhcccCccccCCHHHHh
Q 042823 246 -TDPWPSISSTAKDLVRRMLTKDPKRRITAAQVL 278 (477)
Q Consensus 246 -~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l 278 (477)
....+.+|+++.+++..|+..+|++||+++.+.
T Consensus 237 ~~~l~~~~p~~l~~ii~~~~~~~~~~rP~y~~l~ 270 (293)
T d1csna_ 237 LRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQ 270 (293)
T ss_dssp HHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHH
T ss_pred hHHhcCCCCHHHHHHHHHHhcCCcccCcCHHHHH
Confidence 112246889999999999999999999987764
|
| >d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Type I TGF-beta receptor R4 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.9e-48 Score=369.27 Aligned_cols=248 Identities=18% Similarity=0.274 Sum_probs=189.7
Q ss_pred ccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCC---
Q 042823 21 VMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDET--- 97 (477)
Q Consensus 21 ~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~--- 97 (477)
+..+|.+.+.||+|+||+||+|++ +|+.||||++.... ......+.|+..+..+ +|||||++++++...+
T Consensus 1 ~~~~~~l~~~iG~G~fg~Vy~~~~--~g~~vAvK~~~~~~----~~~~~~e~ei~~~~~~-~HpnIv~~~~~~~~~~~~~ 73 (303)
T d1vjya_ 1 IARTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSRE----ERSWFREAEIYQTVML-RHENILGFIAADNKDNGTW 73 (303)
T ss_dssp CGGGEEEEEEEECCSSSEEEEEEE--TTEEEEEEEECGGG----HHHHHHHHHHHTSTTC-CCTTBCCEEEEEEEECSSS
T ss_pred CCcEEEEEEEEeeCCCeEEEEEEE--CCEEEEEEEECccc----hhHHHHHHHHHHHhhC-CCCcCcceEEEEEeCCCcc
Confidence 456899999999999999999986 68999999985431 1222233455555566 7999999999997653
Q ss_pred -eEEEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH--------cCCeeccCCCCceeeeecCCCCCEEE
Q 042823 98 -AVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHS--------MGVMHRDLKPENFSFISRDDNALLKV 168 (477)
Q Consensus 98 -~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~--------~~ivH~dlkp~Nil~~~~~~~~~~kl 168 (477)
.+|+|||||++|+|.+++.+. .++...+..++.|++.||.|||+ +||+||||||+|||+ +.++.+||
T Consensus 74 ~~~~lv~Ey~~~g~L~~~l~~~-~l~~~~~~~~~~~ia~gl~~lH~~~~~~~~~~~IvHrDlKp~NILl---~~~~~~Kl 149 (303)
T d1vjya_ 74 TQLWLVSDYHEHGSLFDYLNRY-TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILV---KKNGTCCI 149 (303)
T ss_dssp EEEEEEEECCTTCBHHHHHHHC-CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCCGGGEEE---CTTSCEEE
T ss_pred eEEEEEEecccCCCHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCeeccccCccceEE---cCCCCeEE
Confidence 689999999999999999765 58899999999999999999996 599999999999999 78899999
Q ss_pred eecCCccccCCCc-----ceecccccccccchhhhhh-------hcCCccchHhHHHHHHHHhhCCCCCCCCCh------
Q 042823 169 TDFGSALLFEEGQ-----VYRDIVGSGFYIAPEVLRR-------RYGKEIDIWSAGVILYILLSGVPPFWAETK------ 230 (477)
Q Consensus 169 ~Dfg~a~~~~~~~-----~~~~~~gt~~y~aPE~~~~-------~~~~~~DiwslG~il~~l~tg~~pf~~~~~------ 230 (477)
+|||++....... ......||+.|+|||++.+ .++.++|||||||++|||+||.+||.....
T Consensus 150 ~DFGl~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~k~Di~S~Gvvl~el~tg~~~~~~~~~~~~~~~ 229 (303)
T d1vjya_ 150 ADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYY 229 (303)
T ss_dssp CCCTTCEEEETTTTEECC----CCSCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTT
T ss_pred EecCccccccCCCcceeccccceecccCcCChhhccccccccCCCcCcchhhhhhHHHHHHHhhCCCCCCcccccccchh
Confidence 9999998764432 1234679999999999864 367789999999999999999888743221
Q ss_pred ---------hhHHHHHHcCCccCCC-CCC--CCCCHHHHHHHHHhcccCccccCCHHHHhc
Q 042823 231 ---------KGTYDAILQGEIDFDT-DPW--PSISSTAKDLVRRMLTKDPKRRITAAQVLE 279 (477)
Q Consensus 231 ---------~~~~~~i~~~~~~~~~-~~~--~~~~~~~~~li~~~l~~dp~~R~s~~~~l~ 279 (477)
......+.......+. ..+ +..+..+.+|+.+||+.||++|||+.|+++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ei~~ 290 (303)
T d1vjya_ 230 DLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKK 290 (303)
T ss_dssp TTSCSSCCHHHHHHHHTTSCCCCCCCGGGGGCHHHHHHHHHHHTTCCSSGGGSCCHHHHHH
T ss_pred hcccccchHHHHHHHHhccccCCCCCcccCChHHHHHHHHHHHHHcccCHhHCcCHHHHHH
Confidence 1122222222211110 011 112346889999999999999999999975
|
| >d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Sky1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=4.2e-46 Score=363.57 Aligned_cols=263 Identities=24% Similarity=0.421 Sum_probs=197.4
Q ss_pred ccccc-ccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhcc----------CCCCe
Q 042823 18 YEDVM-LHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLS----------GQPNV 86 (477)
Q Consensus 18 ~~~~~-~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~----------~hpni 86 (477)
++.+. +||++++.||+|+||+||+|+++.+|+.||||++.+.. ...+...+|+++++.+. .||||
T Consensus 7 g~~~~~~rY~i~~~LG~G~fg~Vy~~~~~~~g~~vAvKvi~~~~----~~~~~~~~Ei~~l~~l~~~~~~~~~~~~~~~i 82 (362)
T d1q8ya_ 7 GEPYKDARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK----VYTEAAEDEIKLLQRVNDADNTKEDSMGANHI 82 (362)
T ss_dssp TCEETTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH----HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTB
T ss_pred CCCccCCcEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeccc----cchHHHHHHHHHHHHhcchhhhhhhhcCcCce
Confidence 45555 47999999999999999999999999999999996542 23456778888877763 36899
Q ss_pred eEEEEEEEe--CCeEEEEEeccCCCchHHH-HH--HcCCCCHHHHHHHHHHHHHHHHHHHH-cCCeeccCCCCceeeeec
Q 042823 87 VEFKSTYED--ETAVHVVMELCEGGDLFDR-II--AKGYNSERDAATVLRAIVNAVNVCHS-MGVMHRDLKPENFSFISR 160 (477)
Q Consensus 87 v~~~~~~~~--~~~~~lv~e~~~gg~L~~~-l~--~~~~~~~~~~~~i~~qil~~L~~lH~-~~ivH~dlkp~Nil~~~~ 160 (477)
+++++++.. ....+++|+++..+..... .. ....+++..++.++.||+.||.|||+ .||+||||||+|||+...
T Consensus 83 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~qil~al~~lh~~~~IvHrDlKp~NIll~~~ 162 (362)
T d1q8ya_ 83 LKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIV 162 (362)
T ss_dssp CCCCEEEEEEETTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGEEEEEE
T ss_pred EEEEEEeeeccccceeeeeeecccccccccccccccccCCcHHHHHHHHHHHHHHHHHHhhhcCcccccCChhHeeeecc
Confidence 999998854 4567777777765543322 22 24578999999999999999999998 899999999999999543
Q ss_pred CCC---CCEEEeecCCccccCCCcceecccccccccchhhhhh-hcCCccchHhHHHHHHHHhhCCCCCCCCChh-----
Q 042823 161 DDN---ALLKVTDFGSALLFEEGQVYRDIVGSGFYIAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETKK----- 231 (477)
Q Consensus 161 ~~~---~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l~tg~~pf~~~~~~----- 231 (477)
+.. ..+|++|||.|...... ....+||+.|+|||++.+ .|+.++||||+||++++|++|+.||......
T Consensus 163 ~~~~~~~~~kl~dfg~s~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~g~~pF~~~~~~~~~~~ 240 (362)
T d1q8ya_ 163 DSPENLIQIKIADLGNACWYDEH--YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKD 240 (362)
T ss_dssp ETTTTEEEEEECCCTTCEETTBC--CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CH
T ss_pred CcccccceeeEeecccccccccc--cccccccccccChhhccccCCCccccccchHHHHHHHHHCCCCCCCCccccccch
Confidence 322 24999999998765432 345689999999999864 6899999999999999999999999754321
Q ss_pred -hHHHHHHc--CCc----------------------cC--------------CCCCCCCCCHHHHHHHHHhcccCccccC
Q 042823 232 -GTYDAILQ--GEI----------------------DF--------------DTDPWPSISSTAKDLVRRMLTKDPKRRI 272 (477)
Q Consensus 232 -~~~~~i~~--~~~----------------------~~--------------~~~~~~~~~~~~~~li~~~l~~dp~~R~ 272 (477)
........ +.. .. ....++..++++++||.+||.+||.+||
T Consensus 241 ~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~Rp 320 (362)
T d1q8ya_ 241 DDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRA 320 (362)
T ss_dssp HHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCB
T ss_pred hHHHHHHHHHhCCCCHHHhhcccccccccccchhhhccccccCCchhhhcccccccCcccCHHHHHHHHHHCCCChhHCc
Confidence 11111100 000 00 0000112467899999999999999999
Q ss_pred CHHHHhcCcccCcC
Q 042823 273 TAAQVLEHPWLRES 286 (477)
Q Consensus 273 s~~~~l~h~~~~~~ 286 (477)
|++|+|+||||++.
T Consensus 321 ta~e~L~Hp~f~~~ 334 (362)
T d1q8ya_ 321 DAGGLVNHPWLKDT 334 (362)
T ss_dssp CHHHHHTCGGGTTC
T ss_pred CHHHHhcCcccCCC
Confidence 99999999999854
|
| >d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: RIO1-like kinases domain: Rio2 serine protein kinase C-terminal domain species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.94 E-value=3.8e-27 Score=206.98 Aligned_cols=165 Identities=20% Similarity=0.192 Sum_probs=122.6
Q ss_pred ccccccccccCCeEEEEEEEccCCceEEEEEeecCCcc---------------chhhHHHHHHHHHHHHhccCCCCeeEE
Q 042823 25 YFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKM---------------RLAENDMIRREIQIRLYLSGQPNVVEF 89 (477)
Q Consensus 25 Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~---------------~~~~~~~~~~e~~~~~~l~~hpniv~~ 89 (477)
|.++++||+|+||+||+|.+. +|+.||||++...... .........+|...+.++ .|++++..
T Consensus 2 ~~vg~~IG~G~~g~Vy~a~~~-~g~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~v~~~ 79 (191)
T d1zara2 2 DAIGKLMGEGKESAVFNCYSE-KFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKL-QGLAVPKV 79 (191)
T ss_dssp SEEEEEEEECSSEEEEEEEET-TTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHT-TTSSSCCE
T ss_pred chhCCEeeeCcceEEEEEECC-CCCEEEEEEEecccchhhhhhhhhhhccHHHHHHHHHHHHHHHHHHHHc-cCCCcceE
Confidence 568899999999999999985 6899999987532110 011223455688888888 69999988
Q ss_pred EEEEEeCCeEEEEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCceeeeecCCCCCEEEe
Q 042823 90 KSTYEDETAVHVVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHSMGVMHRDLKPENFSFISRDDNALLKVT 169 (477)
Q Consensus 90 ~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~ 169 (477)
+++.. .+++|||++++.+.+ ++...+..++.|++.+|.|||++||+||||||+|||+ ++ ..++|+
T Consensus 80 ~~~~~----~~lvme~~~~~~~~~-------l~~~~~~~i~~ql~~~l~~lH~~giiHrDiKP~NILv---~~-~~~~li 144 (191)
T d1zara2 80 YAWEG----NAVLMELIDAKELYR-------VRVENPDEVLDMILEEVAKFYHRGIVHGDLSQYNVLV---SE-EGIWII 144 (191)
T ss_dssp EEEET----TEEEEECCCCEEGGG-------CCCSCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEE---ET-TEEEEC
T ss_pred EEecC----CEEEEEeeccccccc-------hhhHHHHHHHHHHHHHHHHHhhCCEEEccCChhheee---eC-CCEEEE
Confidence 76532 269999999876532 4556677899999999999999999999999999999 33 449999
Q ss_pred ecCCccccCCCcceecccccccccc------hhhhhhhcCCccchHhHHH
Q 042823 170 DFGSALLFEEGQVYRDIVGSGFYIA------PEVLRRRYGKEIDIWSAGV 213 (477)
Q Consensus 170 Dfg~a~~~~~~~~~~~~~gt~~y~a------PE~~~~~~~~~~DiwslG~ 213 (477)
|||.|.....+.. ..|.. .+.+.+.|+.++|+||+.-
T Consensus 145 DFG~a~~~~~~~~-------~~~l~rd~~~~~~~f~r~y~~~~d~~s~~~ 187 (191)
T d1zara2 145 DFPQSVEVGEEGW-------REILERDVRNIITYFSRTYRTEKDINSAID 187 (191)
T ss_dssp CCTTCEETTSTTH-------HHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
T ss_pred ECCCcccCCCCCc-------HHHHHHHHHHHHHHHcCCCCCcccHHHHHH
Confidence 9999976543321 11222 2334567999999999753
|
| >d1wdcb_ a.39.1.5 (B:) Myosin Essential Chain {Bay scallop (Aequipecten irradians) [TaxId: 31199]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Myosin Essential Chain species: Bay scallop (Aequipecten irradians) [TaxId: 31199]
Probab=99.85 E-value=1.4e-21 Score=162.12 Aligned_cols=134 Identities=16% Similarity=0.396 Sum_probs=119.9
Q ss_pred CCchhhHHHHHHhhhcCCCCCCCccHHHHHHHHHhhCCCCCHHHHHHHHHHhhccchHHHHHhcCC----h-HHHHHHHH
Q 042823 320 LPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNSSTLESLCENLP----T-KEKQKLME 394 (477)
Q Consensus 320 ~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~----~-~~~~~l~~ 394 (477)
++++++..++++|..+|.+++|.|+.+||..+|+.+|..++..++..++...++..++.+|+..+. . ...+.++.
T Consensus 1 L~~~qi~e~~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~el~~~~~~~~~~i~~~eF~~~~~~~~~~~~~~~~l~~ 80 (142)
T d1wdcb_ 1 LPQKQIQEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLKEAPGPLNFTMFLSIFSDKLSGTDSEETIRN 80 (142)
T ss_dssp CCHHHHHHHHHHHHHHCTTCSSSCCHHHHHHHHHHHSSCCCHHHHHHHHTTSSSCCCHHHHHHHHHHHTCSCCCHHHHHH
T ss_pred CCHHHHHHHHHHHHHHcCCCCCcCChHHHHHHHHHhhcCCCHHHHHHHHHhccCccccccccccccccccccchhhhHHH
Confidence 367888999999999999999999999999999999999999999999987776667776665432 1 23578999
Q ss_pred HhhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHh
Q 042823 395 KFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTD 454 (477)
Q Consensus 395 ~F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~ 454 (477)
+|+.||+|++|+|+.+||+.+|..+|.++++++++.+++.+|.+ +|.|+|+||+.+|..
T Consensus 81 aF~~~D~d~~G~I~~~el~~~l~~~g~~lt~~e~~~l~~~~d~~-~G~I~y~eF~~~l~~ 139 (142)
T d1wdcb_ 81 AFAMFDEQETKKLNIEYIKDLLENMGDNFNKDEMRMTFKEAPVE-GGKFDYVKFTAMIKG 139 (142)
T ss_dssp HHHTTCTTCCSCEEHHHHHHHHHHSSSCCCHHHHHHHHHHCCEE-TTEECHHHHHHHHHT
T ss_pred hhhhhcccCCCcccHHHHHHHHHHccccCCHHHHHHHHHHhCCC-CCEEcHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999998 699999999999874
|
| >d1y1xa_ a.39.1.8 (A:) Programmed cell death 6 protein-like protein {Leishmania major [TaxId: 5664]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Programmed cell death 6 protein-like protein species: Leishmania major [TaxId: 5664]
Probab=99.85 E-value=5.7e-21 Score=165.44 Aligned_cols=146 Identities=23% Similarity=0.331 Sum_probs=130.6
Q ss_pred hhHHHHHHhhhcCCCCCCCccHHHHHHHHHhhCCCCCHHHHHHHHHHhhccc----hHHHHHhcCChHHHHHHHHHhhhh
Q 042823 324 ETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNSS----TLESLCENLPTKEKQKLMEKFREM 399 (477)
Q Consensus 324 ~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~----~~~~~~~~~~~~~~~~l~~~F~~~ 399 (477)
+.++++++|..+|.+++|+|+.+||..+|+.+|..++..++..++..+|.+. ++.+|...+ .....++++|+.+
T Consensus 16 ~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~l~~~~s~~~~~~l~~~~d~d~~~~i~~~ef~~~~--~~~~~~~~~F~~~ 93 (182)
T d1y1xa_ 16 DNQELMEWFRAVDTDGSGAISVPELNAALSSAGVPFSLATTEKLLHMYDKNHSGEITFDEFKDLH--HFILSMREGFRKR 93 (182)
T ss_dssp TTSCHHHHHHHHCTTCSSSBCHHHHHHHHCBTTBCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHH--HHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHcCCCcCCCCHHHHHHHHHHhcccCchhhhhhhhcccccccccccccccccccc--ccccccccchhcc
Confidence 3457999999999999999999999999999999999999999999987543 466665543 2356789999999
Q ss_pred cCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhhhCCCcHHHHHHHHHHhccCCCC
Q 042823 400 DTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIYKLETPELLEKAFQYLDKNSDQ 477 (477)
Q Consensus 400 D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~l~~aF~~~D~d~~G 477 (477)
|.+++|.|+.+||+.+|..+|..+++++++.+++.+|.|++|.|+|+||+.++... ..+.++|+.+|.+++|
T Consensus 94 D~~~~g~I~~~el~~~l~~~g~~ls~~e~~~i~~~~d~~~dg~I~~~eF~~~~~~l------~~~~~~F~~~D~~~~G 165 (182)
T d1y1xa_ 94 DSSGDGRLDSNEVRAALLSSGYQVSEQTFQALMRKFDRQRRGSLGFDDYVELSIFV------CRVRNVFAFYDRERTG 165 (182)
T ss_dssp CTTSSSCBCHHHHHHHHHTTSCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHH------HHHHHHHHHHCTTCCS
T ss_pred ccccchhhhhHHHHHHHHHhCCchhHHHHHHHHhhcccCCCCCcCHHHHHHHHHHH------HHHHHHHHHhCCCCCC
Confidence 99999999999999999999999999999999999999999999999999998654 3688999999999998
|
| >d1lkja_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.82 E-value=5.5e-20 Score=153.31 Aligned_cols=135 Identities=27% Similarity=0.489 Sum_probs=117.8
Q ss_pred ccCCchhhHHHHHHhhhcCCCCCCCccHHHHHHHHHhhCCCCCHHHHHHHHHHhhccc----hHHHHHhcC-----ChHH
Q 042823 318 EYLPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNSS----TLESLCENL-----PTKE 388 (477)
Q Consensus 318 ~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~----~~~~~~~~~-----~~~~ 388 (477)
..+++++...++++|..+|.+++|.|+.+||..++...|..+++.++..++...+.++ ++..+...+ ....
T Consensus 2 ~~ls~~~i~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (146)
T d1lkja_ 2 SNLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLALMSRQLKSNDS 81 (146)
T ss_dssp CCCCHHHHHHHHHHHHHHCCSSSSEEEHHHHHHHHHHHTCCCCHHHHHHHHHHHCSSSCCEEEHHHHHHHHHHHTCCCCH
T ss_pred CCCCHHHHHHHHHHHHHHCCCCCCcEeHHHHHHHHHhcCCCCCHHHHHHHHHHhccCCcccccHHHHHHHHHHhhccccH
Confidence 3567889999999999999999999999999999999999999999999988876432 344333322 2223
Q ss_pred HHHHHHHhhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHH
Q 042823 389 KQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMT 453 (477)
Q Consensus 389 ~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~ 453 (477)
.+.++.+|+.||++++|+|+.+||+.+|..+|..+++++++.+++.+| +++|+|+|+||+.+|.
T Consensus 82 ~~~~~~aF~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~d-d~dG~I~~~eF~~~m~ 145 (146)
T d1lkja_ 82 EQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDDMLREVS-DGSGEINIQQFAALLS 145 (146)
T ss_dssp HHHHHHHHHHHCSSSSCEEEHHHHHHHHHHHTCSCCHHHHHHHHHHHC-CSSSEEEHHHHHHHHC
T ss_pred HHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCcccHHHHHHHHHhcc-CCCCeEeHHHHHHHhC
Confidence 568999999999999999999999999999999999999999999999 9999999999999885
|
| >d1ggwa_ a.39.1.5 (A:) Cdc4p {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Cdc4p species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Probab=99.82 E-value=9.9e-21 Score=156.51 Aligned_cols=127 Identities=17% Similarity=0.350 Sum_probs=113.5
Q ss_pred HHHHHHhhhcCCCCCCCccHHHHHHHHHhhCCCCCHHHHHHHHHHhhccchHHHHHhcCC-------hHHHHHHHHHhhh
Q 042823 326 QALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNSSTLESLCENLP-------TKEKQKLMEKFRE 398 (477)
Q Consensus 326 ~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-------~~~~~~l~~~F~~ 398 (477)
..++++|..+|.+++|.|+.+||..+|+.+|..++..++..+....++..++.+|+..+. ....+.++++|+.
T Consensus 5 ~~fke~F~~~D~d~dG~I~~~el~~~l~~lg~~~t~~ei~~~~~~~~~~i~~~eF~~~~~~~~~~~~~~~~~~l~~aF~~ 84 (140)
T d1ggwa_ 5 SPYKQAFSLFDRHGTGRIPKTSIGDLLRACGQNPTLAEITEIESTLPAEVDMEQFLQVLNRPNGFDMPGDPEEFVKGFQV 84 (140)
T ss_dssp TTTHHHHHHTCSSSSSEECHHHHHHHHHHTSCCCCHHHHHHHHTTSCSSEEHHHHHHHHCTTSSSSSSCCHHHHHHHHHT
T ss_pred HHHHHHHHHHCCCCCCeECHHHHHHHHHHHHhhhHHHhhhhhhccccccccchhhhhhhhhhhhcchhhHHHHHHHHHHH
Confidence 567899999999999999999999999999999999999888776666667777665442 1235679999999
Q ss_pred hcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHH
Q 042823 399 MDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMT 453 (477)
Q Consensus 399 ~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~ 453 (477)
||.+++|+|+.+||+.+|..+|.++++++++.+++.+|.+ ||.|+|+||+.+|.
T Consensus 85 ~D~d~~G~I~~~el~~~l~~~g~~lt~~e~~~l~~~~d~~-dG~I~y~eF~~~m~ 138 (140)
T d1ggwa_ 85 FDKDATGMIGVGELRYVLTSLGEKLSNEEMDELLKGVPVK-DGMVNYHDFVQMIL 138 (140)
T ss_dssp TCSSCSSCCCHHHHHHHHHHHHSCSCHHHHHHHHHHTTCS-SCCSTTTHHHHHHH
T ss_pred HhccCCCcchHHHHHHHHHHcCCCCCHHHHHHHHHhhCCC-CCEEeHHHHHHHHh
Confidence 9999999999999999999999999999999999999988 99999999999875
|
| >d1hqva_ a.39.1.8 (A:) Apoptosis-linked protein alg-2 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Apoptosis-linked protein alg-2 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.81 E-value=2e-19 Score=155.33 Aligned_cols=148 Identities=21% Similarity=0.297 Sum_probs=130.1
Q ss_pred chhhHHHHHHhhhcCCCCCCCccHHHHHHHHHhhCCC-CCHHHHHHHHHHhhcc----chHHHHHhcCChHHHHHHHHHh
Q 042823 322 DEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSM-LTEFDVKHLMEAVKNS----STLESLCENLPTKEKQKLMEKF 396 (477)
Q Consensus 322 ~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~-~~~~~~~~~~~~~d~~----~~~~~~~~~~~~~~~~~l~~~F 396 (477)
..+...+..+|..+|.+++|+|+.+||..+|+.++.. .+..++..+++.+|.+ .++.+|+..+. ....++.+|
T Consensus 15 ~~~~~~L~~iF~~~D~d~~G~Is~~E~~~~l~~~~~~~~~~~~~~~l~~~~D~d~~g~i~~~EFl~~~~--~~~~~~~~f 92 (181)
T d1hqva_ 15 LPDQSFLWNVFQRVDKDRSGVISDNELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTGVWK--YITDWQNVF 92 (181)
T ss_dssp CSCHHHHHHHHHHHCTTCCSSBCHHHHHHHCCCSSSSCCCHHHHHHHHHHHCCSSSSSBCHHHHHHHHH--HHHHHHHHH
T ss_pred CccHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHcCCCcccHHHHHHHhhccccccccchhhhHHHhhhh--hcccccccc
Confidence 3456779999999999999999999999999988765 5888999999998754 35777776542 345788999
Q ss_pred hhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhhhCCCcHHHHHHHHHHhccCCC
Q 042823 397 REMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIYKLETPELLEKAFQYLDKNSD 476 (477)
Q Consensus 397 ~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~l~~aF~~~D~d~~ 476 (477)
+.+|++++|.|+.+||+.++...|..+++++++.+++.+|.+++|.|+|+||+.++... +.+...|+.+|+++|
T Consensus 93 ~~~D~~~~G~i~~~el~~~l~~~~~~l~~e~~~~~~~~~d~~~dg~Is~~eF~~~~~~l------~~l~~~F~~~D~~~d 166 (181)
T d1hqva_ 93 RTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDFIQGCIVL------QRLTDIFRRYDTDQD 166 (181)
T ss_dssp HHHCTTCCSSBCHHHHHHHHHHHTBCCCHHHHHHHHHHHCSSCSSCBCHHHHHHHHHHH------HHHHHHHHHHCTTCS
T ss_pred ccccccccchhhhHHHHHHHHHcCCcchhHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH------HHHHHHHHHhCCCCC
Confidence 99999999999999999999999999999999999999999999999999999988643 468999999999999
Q ss_pred C
Q 042823 477 Q 477 (477)
Q Consensus 477 G 477 (477)
|
T Consensus 167 G 167 (181)
T d1hqva_ 167 G 167 (181)
T ss_dssp S
T ss_pred C
Confidence 8
|
| >d1exra_ a.39.1.5 (A:) Calmodulin {Ciliate (Paramecium tetraurelia) [TaxId: 5888]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Ciliate (Paramecium tetraurelia) [TaxId: 5888]
Probab=99.81 E-value=2e-19 Score=149.90 Aligned_cols=135 Identities=27% Similarity=0.519 Sum_probs=120.8
Q ss_pred cCCchhhHHHHHHhhhcCCCCCCCccHHHHHHHHHhhCCCCCHHHHHHHHHHhhcc----chHHHHHhcCCh-----HHH
Q 042823 319 YLPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNS----STLESLCENLPT-----KEK 389 (477)
Q Consensus 319 ~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~----~~~~~~~~~~~~-----~~~ 389 (477)
.+++++...++++|..+|.+++|.|+.+||..++...+..++...+..+++.+|.+ .++.++...+.. ...
T Consensus 2 ~lt~~e~~~l~~~F~~~D~~~~G~Is~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~ 81 (146)
T d1exra_ 2 QLTEEQIAEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLSLMARKMKEQDSE 81 (146)
T ss_dssp CCCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHTCCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHcCCCCCeECHHHHHHHHHhcCCCCCHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHhhccChH
Confidence 46778888999999999999999999999999999999999999999999999753 246666554421 245
Q ss_pred HHHHHHhhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHH
Q 042823 390 QKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMT 453 (477)
Q Consensus 390 ~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~ 453 (477)
+.++.+|+.+|.|++|+|+.+||+.++..+|..+++++++.+++.+|.|+||.|+|+||+.+|.
T Consensus 82 ~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~i~~~~D~d~dG~i~~~eF~~~l~ 145 (146)
T d1exra_ 82 EELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINYEEFVRMMV 145 (146)
T ss_dssp HHHHHHHHHHSTTCSSCBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCSSSSSSBCHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCcCCHHHHHHHHHHHhhcCCHHHHHHHHHHhCCCCCCeEeHHHHHHHhc
Confidence 6899999999999999999999999999999999999999999999999999999999999875
|
| >d1k94a_ a.39.1.8 (A:) Grancalcin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Grancalcin species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.81 E-value=2e-19 Score=152.01 Aligned_cols=139 Identities=18% Similarity=0.241 Sum_probs=119.3
Q ss_pred HHHHhhhcCCCCCCCccHHHHHHHHHhhCCCC-----CHHHHHHHHHHhhccc----hHHHHHhcCChHHHHHHHHHhhh
Q 042823 328 LKEKFIEMDTDKNGTLSYDELRAGLTKVGSML-----TEFDVKHLMEAVKNSS----TLESLCENLPTKEKQKLMEKFRE 398 (477)
Q Consensus 328 l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~-----~~~~~~~~~~~~d~~~----~~~~~~~~~~~~~~~~l~~~F~~ 398 (477)
+.+.|..+ .+++|+|+..||+++|+.+|..+ +.+.++.++..+|.++ ++.+|...+ ...+.++.+|+.
T Consensus 2 ~~~~F~~~-a~~dG~I~~~EL~~~L~~~g~~~~~~~~s~~~~~~li~~~D~~~~G~i~~~EF~~l~--~~~~~~~~~F~~ 78 (165)
T d1k94a_ 2 VYTYFSAV-AGQDGEVDAEELQRCLTQSGINGTYSPFSLETCRIMIAMLDRDHTGKMGFNAFKELW--AALNAWKENFMT 78 (165)
T ss_dssp HHHHHHHH-HGGGTSBCHHHHHHHHHHHTTTTTSCCCCHHHHHHHHHHHCTTCSSCBCHHHHHHHH--HHHHHHHHHHHH
T ss_pred hHHHHHHh-cCCCCCCCHHHHHHHHHHcCCCCCcccCCHHHHHHHHHHhCCCCCCcCcHHHHHHHh--hccchhHHHHHH
Confidence 34667777 67899999999999999998755 4577899999997543 477776643 345789999999
Q ss_pred hcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhhhCCCcHHHHHHHHHHhccCCCC
Q 042823 399 MDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIYKLETPELLEKAFQYLDKNSDQ 477 (477)
Q Consensus 399 ~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~l~~aF~~~D~d~~G 477 (477)
||+|++|+|+.+||+.+|..+|..+++++++.+++.+|. +|.|+|+||+.++... +.+.++|+.+|+|++|
T Consensus 79 fD~d~sG~I~~~El~~~l~~~G~~l~~~~~~~l~~~~d~--~g~i~~~eFi~~~~~l------~~~~~~F~~~D~d~~G 149 (165)
T d1k94a_ 79 VDQDGSGTVEHHELRQAIGLMGYRLSPQTLTTIVKRYSK--NGRIFFDDYVACCVKL------RALTDFFRKRDHLQQG 149 (165)
T ss_dssp HCTTCCSBCCHHHHHHHHHHTTCCCCHHHHHHHHHHHCB--TTBCBHHHHHHHHHHH------HHHHHHHHTTCTTCCS
T ss_pred hCCCCCCeEcHHHHHHHHHHhhhcCCHHHHHHHHHHcCC--CCcCcHHHHHHHHHHH------HHHHHHHHHhCCCCCC
Confidence 999999999999999999999999999999999999975 5899999999988753 4688999999999998
|
| >d1dtla_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=99.81 E-value=7.3e-20 Score=154.41 Aligned_cols=139 Identities=24% Similarity=0.430 Sum_probs=117.0
Q ss_pred hhccCCchhhHHHHHHhhhcCCCC-CCCccHHHHHHHHHhhCCCCCHHHHHHHHHHhhccc----hHHHHH----h----
Q 042823 316 IVEYLPDEETQALKEKFIEMDTDK-NGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNSS----TLESLC----E---- 382 (477)
Q Consensus 316 i~~~~~~~~~~~l~~~F~~~D~~~-~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~----~~~~~~----~---- 382 (477)
....+++++...++++|..+|.++ +|.|+..||..+|+++|..+++.++..++..++.+. .+..+. .
T Consensus 4 ~~~~Lt~~~~~~l~~~F~~~D~d~~dG~I~~~e~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (156)
T d1dtla_ 4 AVEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKD 83 (156)
T ss_dssp GGGGSCHHHHHHHHHHHHHHTTTCGGGSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTSSSSBCHHHHHHHHHHHHC-
T ss_pred HHHHCCHHHHHHHHHHHHHHcCCCCCCeECHHHHHHHHHHcCCCCCHHHHHHHHHHhhccCCCccchhhhhhhhhhcccc
Confidence 456778889999999999999995 899999999999999999999999999999886432 122221 1
Q ss_pred cCChHHHHHHHHHhhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHh
Q 042823 383 NLPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTD 454 (477)
Q Consensus 383 ~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~ 454 (477)
.......+.++.+|+.||.|++|+|+.+||+.++..+|..+++++++.+++.+|.|+||.|+|+||+.+|..
T Consensus 84 ~~~~~~~~~l~~~F~~~D~d~~G~I~~~e~~~~~~~~~~~ls~~e~~~i~~~~D~d~dG~I~~~eF~~~l~g 155 (156)
T d1dtla_ 84 DSKGKSEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMKG 155 (156)
T ss_dssp ----CHHHHHHHHHHHHCTTCSSEEEHHHHGGGGTTC--CCCHHHHHHHHHHHCTTSSSEEEHHHHHHHHHC
T ss_pred cccccHHHHHHHHHHHhCcCCCCcCcHHHHHHHHhhcCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHcC
Confidence 112234578999999999999999999999999999999999999999999999999999999999999863
|
| >d2mysc_ a.39.1.5 (C:) Myosin Regulatory Chain {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Myosin Regulatory Chain species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=99.80 E-value=1.9e-19 Score=149.81 Aligned_cols=128 Identities=23% Similarity=0.357 Sum_probs=111.4
Q ss_pred hHHHHHHhhhcCCCCCCCccHHHHHHHHHhhCCCCCHHHHHHHHHHhhcc------chHHHHHhcCC-------hHHHHH
Q 042823 325 TQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNS------STLESLCENLP-------TKEKQK 391 (477)
Q Consensus 325 ~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~------~~~~~~~~~~~-------~~~~~~ 391 (477)
...++++|..+|.+++|+|+.+||..+|+.+|..++..++..++..++.+ .++.+|+..+. ....+.
T Consensus 3 ~eelke~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~e~~~~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~ 82 (145)
T d2mysc_ 3 ADDFKEAFLLFDRTGDAKITASQVGDIARALGQNPTNAEINKILGNPSKEEMNAAAITFEEFLPMLQAAANNKDQGTFED 82 (145)
T ss_pred HHHHHHHHHHHcCCCCCeECHHHHHHHHHHhhhcchhhhhHHHHHHHhhcccccCccchhHHHHHHhhhhhccccchHHH
Confidence 45789999999999999999999999999999999999999998877532 34666654432 134567
Q ss_pred HHHHhhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHH
Q 042823 392 LMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMT 453 (477)
Q Consensus 392 l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~ 453 (477)
++.+|+.||.+++|+|+.+||+.+|..+|.++++++++.+++. |.|++|.|+|+||+.++.
T Consensus 83 l~~aF~~~D~d~~G~I~~~el~~~l~~~g~~~~~~e~~~l~~~-~~d~dG~I~y~eF~~~ll 143 (145)
T d2mysc_ 83 FVEGLRVFDKEGNGTVMGAELRHVLATLGEKMTEEEVEELMKG-QEDSNGCINYEAFVKHIM 143 (145)
T ss_pred HHHHHHHhhcCCCCEEcHHHHHHHHHHhCCCCCHHHHHHHHhh-cCCCCCeEEHHHHHHHHh
Confidence 9999999999999999999999999999999999999999974 789999999999999874
|
| >d2obha1 a.39.1.5 (A:26-166) Calmodulin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.80 E-value=3.5e-19 Score=147.46 Aligned_cols=131 Identities=22% Similarity=0.502 Sum_probs=117.2
Q ss_pred chhhHHHHHHhhhcCCCCCCCccHHHHHHHHHhhCCCCCHHHHHHHHHHhhccc----hHHHHHhcCCh-----HHHHHH
Q 042823 322 DEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNSS----TLESLCENLPT-----KEKQKL 392 (477)
Q Consensus 322 ~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~----~~~~~~~~~~~-----~~~~~l 392 (477)
+++.+.++++|..+|.+++|.|+..||..+++.+|..++...+..++..+|.+. ++.+|...+.. ...+.+
T Consensus 2 ~~~~~elk~~F~~~D~~~~G~Is~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~l 81 (141)
T d2obha1 2 EEQKQEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNFGDFLTVMTQKMSEKDTKEEI 81 (141)
T ss_dssp HHHHHHHHHHHHTTCTTCCSEEEGGGHHHHHHHTTCCCCHHHHHHHHHHHTTTCCSEEEHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCCCeEeHHHHHHHHHhcCCchhHHHHHHHHHhhccCCCCeechHHHHHHHHHHHhhhccHHHH
Confidence 467789999999999999999999999999999999999999999999987432 46666554432 235679
Q ss_pred HHHhhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHH
Q 042823 393 MEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLM 452 (477)
Q Consensus 393 ~~~F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~ 452 (477)
+.+|..+|.+++|+|+.++|+.++..+|..++++++..+++.+|.|+||.|+|+||+.+|
T Consensus 82 ~~~f~~~d~~~~G~i~~~el~~~l~~~g~~l~~~e~~~l~~~~D~d~dG~i~~~EF~~~m 141 (141)
T d2obha1 82 LKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVSEQEFLRIM 141 (141)
T ss_dssp HHHHHHHCTTCSSSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTSSSSBCHHHHHHHH
T ss_pred HHHHHHhcccCCCCccHHHHHHHHHHhCCCCCHHHHHHHHHHHCCCCCCCEeHHHHHHhC
Confidence 999999999999999999999999999999999999999999999999999999999876
|
| >d2mysb_ a.39.1.5 (B:) Myosin Essential Chain {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Myosin Essential Chain species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=99.79 E-value=2.7e-19 Score=148.83 Aligned_cols=135 Identities=19% Similarity=0.328 Sum_probs=114.2
Q ss_pred CCchhhHHHHHHhhhcCCCCCCCccHHHHHHHHHhhCCCCCH-HHHHHHHHHhhccchHHHHHhcCCh-----HHHHHHH
Q 042823 320 LPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTE-FDVKHLMEAVKNSSTLESLCENLPT-----KEKQKLM 393 (477)
Q Consensus 320 ~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~-~~~~~~~~~~d~~~~~~~~~~~~~~-----~~~~~l~ 393 (477)
++++++.+++++|..+|.+++|.|+..||..+|+.+|..++. ..+..+++..++..++.+|...+.. ...+.++
T Consensus 1 f~~~qi~el~e~F~~~D~~~~G~I~~~e~~~~l~~lg~~~~~~~~~~~~~~~~~g~i~~~eF~~~~~~~~~~~~~~~~l~ 80 (145)
T d2mysb_ 1 FDETEIEDFKEAFTVIDQNADGIIDKDDLRETFAAMGRLNVKNEELDAMIKEASGPINFTVFLTMFGEKLKGADPEDVIM 80 (145)
T ss_pred CCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhCCCcchHHHHHHHHHhccCceeechhhhhhhhcccccchHHHHH
Confidence 356778889999999999999999999999999999976554 4455555555555566666654422 2356799
Q ss_pred HHhhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHh
Q 042823 394 EKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTD 454 (477)
Q Consensus 394 ~~F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~ 454 (477)
.+|+.||.+++|+|+.+||+.+|+.+|.++++++++.+++.+|.|++|.|+|.+|+.+|..
T Consensus 81 ~aF~~fD~~~~g~I~~~el~~~l~~~g~~ls~~e~~~~~~~~d~d~dg~I~y~eF~~~l~~ 141 (145)
T d2mysb_ 81 GAFKVLDPDGKGSIKKSFLEELLTTGGGRFTPEEIKNMWAAFPPDVAGNVDYKNICYVITH 141 (145)
T ss_pred HHHHhhhhcccchhhHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHhcc
Confidence 9999999999999999999999999999999999999999999999999999999999864
|
| >d1alva_ a.39.1.8 (A:) Calpain small (regulatory) subunit (domain VI) {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Calpain small (regulatory) subunit (domain VI) species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.79 E-value=4.4e-19 Score=152.15 Aligned_cols=145 Identities=21% Similarity=0.299 Sum_probs=122.9
Q ss_pred hhhHHHHHHhhhcCCCCCCCccHHHHHHHHHhhCCC--------CCHHHHHHHHHHhhccc----hHHHHHhcCChHHHH
Q 042823 323 EETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSM--------LTEFDVKHLMEAVKNSS----TLESLCENLPTKEKQ 390 (477)
Q Consensus 323 ~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~--------~~~~~~~~~~~~~d~~~----~~~~~~~~~~~~~~~ 390 (477)
++..+++++|..+|. .+|.|+..||..+|+.+|.. .+.+.+..++..+|.++ ++.+|.... ....
T Consensus 1 ee~~~~r~~F~~~d~-~dg~I~~~EL~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~~d~d~~g~i~~~ef~~~~--~~~~ 77 (173)
T d1alva_ 1 EEVRQFRRLFAQLAG-DDMEVSATELMNILNKVVTRHPDLKTDGFGIDTCRSMVAVMDSDTTGKLGFEEFKYLW--NNIK 77 (173)
T ss_dssp CHHHHHHHHHHHHHG-GGTSBCHHHHHHHHHHHHHTCSTTCCSCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHH--HHHH
T ss_pred ChHHHHHHHHHHHcC-CCCcCCHHHHHHHHHHhCCCcchhhhccCCHHHHHHHHHHhccCCCCcccchhhhhhh--hhhh
Confidence 356789999999994 48999999999999998654 35678899999987543 477776543 3456
Q ss_pred HHHHHhhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhhhCCCcHHHHHHHHHH
Q 042823 391 KLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIYKLETPELLEKAFQY 470 (477)
Q Consensus 391 ~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~l~~aF~~ 470 (477)
.++.+|+.||.|++|.|+.+||+.+|..+|..+++++++.++ .+|.|++|.|+|+||+.++... +.+..+|+.
T Consensus 78 ~~~~~f~~~D~d~~G~I~~~el~~~L~~~g~~~~~~~~~~~~-~~d~d~~G~i~~~EF~~~~~~~------~~~~~~f~~ 150 (173)
T d1alva_ 78 KWQAIYKQFDVDRSGTIGSSELPGAFEAAGFHLNEHLYSMII-RRYSDEGGNMDFDNFISCLVRL------DAMFRAFKS 150 (173)
T ss_dssp HHHHHHHHHCTTCCSSBCTTTHHHHHHHHTCCCCHHHHHHHH-HHHTCSSSCBCHHHHHHHHHHH------HHHHHHHHH
T ss_pred HHHHHHHHhccCCCCeecHHHHHHHHHHHHHhhHHHHHHHhh-ccccCCCCeEeHHHHHHHHHHH------HHHHHHHHH
Confidence 789999999999999999999999999999999998887776 4566999999999999998653 578899999
Q ss_pred hccCCCC
Q 042823 471 LDKNSDQ 477 (477)
Q Consensus 471 ~D~d~~G 477 (477)
||+|++|
T Consensus 151 ~D~d~~G 157 (173)
T d1alva_ 151 LDKDGTG 157 (173)
T ss_dssp HSSSCCS
T ss_pred hCCCCCC
Confidence 9999998
|
| >d1df0a1 a.39.1.8 (A:515-700) Calpain large subunit, C-terminal domain (domain IV) {Rat (Rattus norvegicus), M-type [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Calpain large subunit, C-terminal domain (domain IV) species: Rat (Rattus norvegicus), M-type [TaxId: 10116]
Probab=99.78 E-value=3.6e-19 Score=154.51 Aligned_cols=142 Identities=23% Similarity=0.282 Sum_probs=121.6
Q ss_pred HHHHHHhhhcCCCCCCCccHHHHHHHHHhhCCC--------CCHHHHHHHHHHhhccc----hHHHHHhcCChHHHHHHH
Q 042823 326 QALKEKFIEMDTDKNGTLSYDELRAGLTKVGSM--------LTEFDVKHLMEAVKNSS----TLESLCENLPTKEKQKLM 393 (477)
Q Consensus 326 ~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~--------~~~~~~~~~~~~~d~~~----~~~~~~~~~~~~~~~~l~ 393 (477)
..++++|..+| +++|.|+..||..+|..+|.. .+...+..++..+|.++ ++.+|.... .....++
T Consensus 18 ~~~r~~F~~~d-~~dG~Is~~EL~~~L~~~~~~~~~~~~~~~s~~~~~~l~~~~D~d~~G~I~~~EF~~~~--~~~~~~~ 94 (186)
T d1df0a1 18 DGFRRLFAQLA-GEDAEISAFELQTILRRVLAKREDIKSDGFSIETCKIMVDMLDEDGSGKLGLKEFYILW--TKIQKYQ 94 (186)
T ss_dssp HHHHHHHHHHH-GGGTCEEHHHHHHHHHHHHHC----CCCCCCHHHHHHHHHHHCCSSSSEECHHHHHHHH--HHHHHHH
T ss_pred HHHHHHHHHHc-CCCCeEcHHHHHHHHHHhcccccccccccCCHHHHHHHHHHHcCCCCCcccHHHHHHHH--HhHHHHH
Confidence 56889999998 899999999999999987543 45678899999998654 477776543 3456899
Q ss_pred HHhhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhhhCCCcHHHHHHHHHHhcc
Q 042823 394 EKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIYKLETPELLEKAFQYLDK 473 (477)
Q Consensus 394 ~~F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~l~~aF~~~D~ 473 (477)
.+|+.||+|++|+|+.+||+.+|+.+|..++++.+ +++...|.|++|.|+|+||+.++... +.+..+|+.+|+
T Consensus 95 ~~F~~~D~d~sG~I~~~El~~~l~~~g~~~~~~~~-~~~~~~d~d~dg~I~f~eFi~~~~~l------~~~~~~F~~~D~ 167 (186)
T d1df0a1 95 KIYREIDVDRSGTMNSYEMRKALEEAGFKLPCQLH-QVIVARFADDELIIDFDNFVRCLVRL------EILFKIFKQLDP 167 (186)
T ss_dssp HHHHHHCTTCCSCEEGGGHHHHHHHTTEECCHHHH-HHHHHHHCCSTTEECHHHHHHHHHHH------HHHHHHHHHHCT
T ss_pred HHHHhhCCCCCCcccHHHHHHHHHHHHhcccHHHH-HHHHHHHcCCCCeEeHHHHHHHHHHH------HHHHHHHHHhCC
Confidence 99999999999999999999999999999998665 55557899999999999999998753 589999999999
Q ss_pred CCCC
Q 042823 474 NSDQ 477 (477)
Q Consensus 474 d~~G 477 (477)
|++|
T Consensus 168 ~~~G 171 (186)
T d1df0a1 168 ENTG 171 (186)
T ss_dssp TCCS
T ss_pred CCCC
Confidence 9998
|
| >d1topa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=99.78 E-value=7.8e-19 Score=149.01 Aligned_cols=138 Identities=24% Similarity=0.399 Sum_probs=120.0
Q ss_pred hccCCchhhHHHHHHhhhcCCCCCCCccHHHHHHHHHhhCCCCCHHHHHHHHHHhhccc----hHHHHHhcC--------
Q 042823 317 VEYLPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNSS----TLESLCENL-------- 384 (477)
Q Consensus 317 ~~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~----~~~~~~~~~-------- 384 (477)
...+++++...++++|..+|.+++|.|+..||..++...+..+++.++..++..++.+. .+.+++...
T Consensus 11 ~~~ls~~~i~el~~~F~~~D~d~~G~Is~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~e~~~~~~~~~~~~~ 90 (162)
T d1topa_ 11 RAFLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQMKEDA 90 (162)
T ss_dssp HHHSCHHHHHHHHHHHHTTTCSCSSEEEGGGHHHHHHHTTCCCCHHHHHHHHHHHCTTSCCEEEHHHHHHHHHHHHHHHH
T ss_pred HccCCHHHHHHHHHHHHHHcCCCCCeEcHHHHHHHHhccCCchhHHHHHhhhheeccCCCCCeeeehhhhhhhhhhhhhc
Confidence 45567888889999999999999999999999999999999999999999999997542 233333221
Q ss_pred ChHHHHHHHHHhhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHh
Q 042823 385 PTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTD 454 (477)
Q Consensus 385 ~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~ 454 (477)
.....+.++.+|+.+|.|++|+|+.+||+.+|...|...+++++..+++.+|.|+||.|+|+||+.+|..
T Consensus 91 ~~~~~~~~~~aF~~~D~d~~G~Is~~e~~~~l~~~~~~~~~~~~~~l~~~~D~d~dG~Is~~EF~~~l~~ 160 (162)
T d1topa_ 91 KGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFDEFLKMMEG 160 (162)
T ss_dssp HHHHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHTTTCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHS
T ss_pred ccCcHHHHHHHHHHHCCCCCCCCcHHHHHHHHHhhCCCCCHHHHHHHHHHhCCCCCCcEEHHHHHHHHHc
Confidence 1234567889999999999999999999999999999999999999999999999999999999999864
|
| >d1wdcc_ a.39.1.5 (C:) Myosin Regulatory Chain {Bay scallop (Aequipecten irradians) [TaxId: 31199]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Myosin Regulatory Chain species: Bay scallop (Aequipecten irradians) [TaxId: 31199]
Probab=99.77 E-value=2.1e-19 Score=150.77 Aligned_cols=135 Identities=22% Similarity=0.300 Sum_probs=112.8
Q ss_pred CCchhhHHHHHHhhhcCC--CCCCCccHHHHHHHHHhhCCCCCHHHHHHHHHHhhc---cchHHHHHhcC------ChHH
Q 042823 320 LPDEETQALKEKFIEMDT--DKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKN---SSTLESLCENL------PTKE 388 (477)
Q Consensus 320 ~~~~~~~~l~~~F~~~D~--~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~---~~~~~~~~~~~------~~~~ 388 (477)
+++++...++++|..+|. +++|.|+.+||..+|+.+|..+++.++..+...... ..++.+|+..+ ....
T Consensus 1 Ls~eqi~~l~~~F~~fD~~~~~dG~I~~~el~~~l~~lG~~~t~~e~~~~~~~~~~~~~~i~~~eFl~~~~~~~~~~~~~ 80 (152)
T d1wdcc_ 1 LSQDEIDDLKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRNEDVFAVGGTHKMGEKSLPFEEFLPAYEGLMDCEQGT 80 (152)
T ss_dssp CCHHHHHHHHHHHHHHHHHTCSSSCEEGGGHHHHHHHTTCCCCHHHHHHTTCCSSTTSCEECHHHHHHHHHHHTTSCCCC
T ss_pred CCHHHHHHHHHHHHHHCcCCCCCCeECHHHHHHHHHHhccCccHhhhhhhhhhhccccccccccccccccccccccchhH
Confidence 356778889999999995 889999999999999999999999998876543322 23466665432 1234
Q ss_pred HHHHHHHhhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCC--CCCcccHHHHHHHHHh
Q 042823 389 KQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDID--GNGNIDSIEFVNLMTD 454 (477)
Q Consensus 389 ~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~--~~g~i~~~eF~~~~~~ 454 (477)
.++++++|+.||.+++|+|+.+||+.+|..+|.++++++++.+++.+|.+ ++|.|+|+||+..|..
T Consensus 81 ~~~l~~aF~~~D~~~~G~I~~~el~~~l~~~g~~ls~~e~~~l~~~~d~~~d~~G~I~y~eF~~~~~~ 148 (152)
T d1wdcc_ 81 FADYMEAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIKLTDLQEDLEGNVKYEDFVKKVMA 148 (152)
T ss_dssp HHHHHHHHHTTCSSSSSEEEHHHHHHHHHHSSSCCCHHHHHHHHHHHTCCCCTTSEEEHHHHHHHHHH
T ss_pred HHhhhhhhhccccccCccchHHHHHHHHHHcCCCCCHHHHHHHHHHhccCCCCCCEEEHHHHHHHHhc
Confidence 56899999999999999999999999999999999999999999999864 5689999999998763
|
| >d1juoa_ a.39.1.8 (A:) Sorcin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Sorcin species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.77 E-value=1.7e-18 Score=148.24 Aligned_cols=146 Identities=21% Similarity=0.289 Sum_probs=124.8
Q ss_pred CchhhHHHHHHhhhcCCCCCCCccHHHHHHHHHhhCCCC-----CHHHHHHHHHHhhccc----hHHHHHhcCChHHHHH
Q 042823 321 PDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSML-----TEFDVKHLMEAVKNSS----TLESLCENLPTKEKQK 391 (477)
Q Consensus 321 ~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~-----~~~~~~~~~~~~d~~~----~~~~~~~~~~~~~~~~ 391 (477)
+.++...++..|..++ ++||.|+..||+.+|+++|..+ +.+.+..+++.+|.++ ++.+|...+ .....
T Consensus 2 p~~~~~~~~~~F~~~~-~~dG~Is~~EL~~~L~~~g~~~~~~~~~~~~v~~l~~~~D~d~~G~I~f~EF~~~~--~~~~~ 78 (172)
T d1juoa_ 2 PGQTQDPLYGYFAAVA-GQDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFKELW--AVLNG 78 (172)
T ss_dssp TTCCCCTTHHHHHHHH-TTTTEECHHHHHHHHHHHTTTCSSCCCCHHHHHHHHHHHCTTCSSCEEHHHHHHHH--HHHHH
T ss_pred CcchHHHHHHHHHHhC-CCCCCCCHHHHHHHHHHcCCCCCcccCCHHHHHHHHHHHCCCCCCceehHHHHHHH--Hhhhh
Confidence 3455566888999886 7899999999999999998764 4678899999998653 477776544 23467
Q ss_pred HHHHhhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhhhCCCcHHHHHHHHHHh
Q 042823 392 LMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIYKLETPELLEKAFQYL 471 (477)
Q Consensus 392 l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~l~~aF~~~ 471 (477)
+..+|+.||.+++|+|+.+|++.+|..+|..+++++++.+++.+|. +|.|+|++|+.+|... +.+..+|+.+
T Consensus 79 ~~~~f~~~D~d~sG~i~~~El~~~l~~~g~~ls~~~~~~l~~~~d~--~g~i~~~eF~~~~~~~------~~~~~~f~~~ 150 (172)
T d1juoa_ 79 WRQHFISFDTDRSGTVDPQELQKALTTMGFRLSPQAVNSIAKRYST--NGKITFDDYIACCVKL------RALTDSFRRR 150 (172)
T ss_dssp HHHHHHTTCTTCCSEECHHHHHHHHHHTTCCCCHHHHHHHHHHTCS--SSSEEHHHHHHHHHHH------HHHHHHHHHT
T ss_pred hhHHHHHhCcCCCCcCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHh--cCCcCHHHHHHHHHHH------HHHHHHHHHh
Confidence 8899999999999999999999999999999999999999999974 6889999999999764 4789999999
Q ss_pred ccCCCC
Q 042823 472 DKNSDQ 477 (477)
Q Consensus 472 D~d~~G 477 (477)
|+|++|
T Consensus 151 D~d~~G 156 (172)
T d1juoa_ 151 DTAQQG 156 (172)
T ss_dssp CTTCCS
T ss_pred CCCCCC
Confidence 999998
|
| >d1m45a_ a.39.1.5 (A:) Myosin Light Chain Mlc1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Myosin Light Chain Mlc1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.77 E-value=2e-19 Score=149.87 Aligned_cols=127 Identities=23% Similarity=0.403 Sum_probs=108.3
Q ss_pred HHHHhhhcCCCCCCCccHHHHHHHHHhhCCCCCHHHHHHHHHHhhc-----cchHHHHHhcCCh----------HHHHHH
Q 042823 328 LKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKN-----SSTLESLCENLPT----------KEKQKL 392 (477)
Q Consensus 328 l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~-----~~~~~~~~~~~~~----------~~~~~l 392 (477)
++++|..+|.+++|.|+.+||..+|+.+|..++++++..++..... ..++.+|...+.. ...+.+
T Consensus 4 ~k~~F~~~D~d~~G~I~~~el~~~l~~lg~~~s~~ei~~l~~~~~~~~~~~~i~~~ef~~~~~~~~~~~~~~~~~~~~~l 83 (146)
T d1m45a_ 4 NKDIFTLFDKKGQGAIAKDSLGDYLRAIGYNPTNQLVQDIINADSSLRDASSLTLDQITGLIEVNEKELDATTKAKTEDF 83 (146)
T ss_dssp CTTCHHHHCTTCCSEEEGGGHHHHHHHTTCCCCHHHHHHHHHC--CC--CCEEEHHHHHHHHHHTHHHHHGGGCCCTHHH
T ss_pred HHHHHHHHcCCCcCCCCHHHHHHHHHHcCCchhHHHHhhhhccccccccccccccchhhhhhhhhcccccccccchHHHH
Confidence 4678999999999999999999999999999999999999875431 2345555443311 123578
Q ss_pred HHHhhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHh
Q 042823 393 MEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTD 454 (477)
Q Consensus 393 ~~~F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~ 454 (477)
.++|+.||.+++|+|+.+||+.+|..+|.++++++++.+++.+|.|++|.|+|+||+..+.+
T Consensus 84 ~~~F~~~D~~~~G~I~~~el~~~l~~~g~~l~~~ei~~l~~~~D~d~dG~I~y~eF~~~i~~ 145 (146)
T d1m45a_ 84 VKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNGEIDYKKFIEDVLR 145 (146)
T ss_dssp HHHHHTTCSSSSSEEEHHHHHHHHHHSTTCCCHHHHHHHHTTCCCCTTSEEEHHHHHHHHHC
T ss_pred HHHHHhhccccccccchhhhhhhhcccCCcchHHHHHHHHHHhCCCCCCcEEHHHHHHHHHc
Confidence 99999999999999999999999999999999999999999999999999999999988753
|
| >d1qxpa2 a.39.1.8 (A:515-702) Calpain large subunit, C-terminal domain (domain IV) {Rat (Rattus norvegicus), mu-type [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Calpain large subunit, C-terminal domain (domain IV) species: Rat (Rattus norvegicus), mu-type [TaxId: 10116]
Probab=99.76 E-value=2.3e-19 Score=155.11 Aligned_cols=147 Identities=20% Similarity=0.261 Sum_probs=108.7
Q ss_pred Cchhh-HHHHHHhhhcCCCCCCCccHHHHHHHHHhhCCC--------CCHHHHHHHHHHhhccc----hHHHHHhcCChH
Q 042823 321 PDEET-QALKEKFIEMDTDKNGTLSYDELRAGLTKVGSM--------LTEFDVKHLMEAVKNSS----TLESLCENLPTK 387 (477)
Q Consensus 321 ~~~~~-~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~--------~~~~~~~~~~~~~d~~~----~~~~~~~~~~~~ 387 (477)
++++. ..++++|..+| +++|.|+..||+.+|.+++.. ++.+.++.++..+|.++ ++.+|...+ .
T Consensus 14 s~~~~~~~~r~~F~~~d-~~dG~Is~~EL~~~L~~~~~~~~~~~~~~~s~e~~~~li~~~D~d~~G~i~~~EF~~l~--~ 90 (188)
T d1qxpa2 14 SEEEIDDNFKTLFSKLA-GDDMEISVKELQTILNRIISKHKDLRTNGFSLESCRSMVNLMDRDGNGKLGLVEFNILW--N 90 (188)
T ss_dssp -------------CCCC-CSSSSCCCSCTTTTTCC---------CCCCCHHHHHHHHHHHCC--CCCCCSSSHHHHH--H
T ss_pred CHHHHHHHHHHHHHHHc-CCCCEECHHHHHHHHHHhCccccccccccCCHHHHHHHHHHhcCCCCCcccHHHHHHHH--h
Confidence 34443 35889999999 558999999999988776543 35677899999998653 344444332 3
Q ss_pred HHHHHHHHhhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhhhCCCcHHHHHHH
Q 042823 388 EKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIYKLETPELLEKA 467 (477)
Q Consensus 388 ~~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~l~~a 467 (477)
..+.++.+|+.||+|++|+|+..||+.+|..+|..++++.++.++.. +.+++|.|+|+||+.++... +.+..+
T Consensus 91 ~~~~~~~~F~~~D~d~sG~i~~~El~~~l~~~g~~~~~~~~~~l~~~-~~~~dg~i~f~eFi~~~~~l------~~~~~~ 163 (188)
T d1qxpa2 91 RIRNYLTIFRKFDLDKSGSMSAYEMRMAIEAAGFKLPCQLHQVIVAR-FADDELIIDFDNFVRCLVRL------EILFKI 163 (188)
T ss_dssp HHHHHHHHHGGGCTTCCSCCBHHHHHHHHHHTTEECCHHHHHHHHHH-TSCSSSBCCHHHHHHHHHHH------HHHHHH
T ss_pred hhHHHHHHHHHhCCCCCCEECHHHHHHHHHHhhhcCCHHHHHHHHHH-hcCCCCcCCHHHHHHHHHHH------HHHHHH
Confidence 45789999999999999999999999999999999998777766665 67999999999999998753 468889
Q ss_pred HHHhccCCCC
Q 042823 468 FQYLDKNSDQ 477 (477)
Q Consensus 468 F~~~D~d~~G 477 (477)
|+.+|++++|
T Consensus 164 F~~~D~~~~G 173 (188)
T d1qxpa2 164 FKQLDPENTG 173 (188)
T ss_dssp HHHSCSSCCS
T ss_pred HHHhCCCCCC
Confidence 9999999998
|
| >d1w7jb1 a.39.1.5 (B:11-149) Myosin Essential Chain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Myosin Essential Chain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.72 E-value=1.3e-18 Score=143.68 Aligned_cols=124 Identities=23% Similarity=0.359 Sum_probs=104.0
Q ss_pred HHHHhhhcCCCCCCCccHHHHHHHHHhhCCCCCHHHHHHHHHHhhc------cchHHHHHhcC-------ChHHHHHHHH
Q 042823 328 LKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKN------SSTLESLCENL-------PTKEKQKLME 394 (477)
Q Consensus 328 l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~------~~~~~~~~~~~-------~~~~~~~l~~ 394 (477)
++++|..+|.+++|.|+.+||..+|+.+|..+++.++..++..++. ..++.+|...+ .....++++.
T Consensus 2 ~ke~F~~~D~d~~G~I~~~el~~~l~~lg~~~t~~e~~~~~~~~~~~~~~~~~i~~~ef~~~~~~~~~~~~~~~~~~l~~ 81 (139)
T d1w7jb1 2 FKEAFELFDRVGDGKILYSQCGDVMRALGQNPTNAEVLKVLGNPKSDELKSRRVDFETFLPMLQAVAKNRGQGTYEDYLE 81 (139)
T ss_dssp HHHHHHHHCCSSSSEEESTTHHHHHHHTTCCCCHHHHHHHTTCCCHHHHTTCEEEHHHHHHHHHHHCC--------CCHH
T ss_pred HHHHHHHHhCCCCCeECHHHHHHHHHHhccCCCHHHHHHHHHHHhcccccCCceeeeccchhhHhhhhhccccHHHHHHH
Confidence 6789999999999999999999999999999999999998876542 23455554322 1223456899
Q ss_pred HhhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHH
Q 042823 395 KFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLM 452 (477)
Q Consensus 395 ~F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~ 452 (477)
+|+.+|++++|+|+.+||+.+|..+|..+++++++.+++. |.++||.|+|.||+.+|
T Consensus 82 aF~~~D~d~~G~I~~~el~~~l~~~g~~~~~~e~~~l~~~-~~d~dg~I~~~eF~~~l 138 (139)
T d1w7jb1 82 GFRVFDKEGNGKVMGAELRHVLTTLGEKMTEEEVETVLAG-HEDSNGCINYEAFLKHI 138 (139)
T ss_dssp HHHTTCTTSSSEEEHHHHHHHHHHSSSCCCHHHHHHHHTT-CCCTTSEEEHHHHHHHT
T ss_pred hhhhccCCCCCeEeHHHHHHHHHHhCCCCCHHHHHHHHhh-CCCCCCeEeHHHHHHHh
Confidence 9999999999999999999999999999999999999864 88999999999999875
|
| >d1jfja_ a.39.1.5 (A:) EHCABP {Entamoeba (Entamoeba histolytica) [TaxId: 5759]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: EHCABP species: Entamoeba (Entamoeba histolytica) [TaxId: 5759]
Probab=99.68 E-value=1.1e-16 Score=130.82 Aligned_cols=120 Identities=23% Similarity=0.371 Sum_probs=105.4
Q ss_pred HHHhhhcCCCCCCCccHHHHHHHHHhhCCCCCHHHHHHHHHHhhccc----hHHHHHhcCC-------hHHHHHHHHHhh
Q 042823 329 KEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNSS----TLESLCENLP-------TKEKQKLMEKFR 397 (477)
Q Consensus 329 ~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~----~~~~~~~~~~-------~~~~~~l~~~F~ 397 (477)
..+|..+|.|++|.|+..||..++..++..+++.++..+++.+|.++ ++.+|...+. ......++.+|+
T Consensus 3 e~~F~~~D~d~dG~is~~E~~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~Ef~~~~~~~~~~~~~~~~~~~~~~F~ 82 (134)
T d1jfja_ 3 EALFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYGSIQGQDLSDDKIGLKVLYK 82 (134)
T ss_dssp HHHHHHHCTTCSSEEEHHHHHHHHHTTCCSSHHHHHHHHHHHHCSSCCSEEEHHHHHHHTTCSSCCSSHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCcCCCcHHHHHHHHHHcCCCCCHHHHHHHHHHhhhccccccccccccccccccccccccccccccccccc
Confidence 57899999999999999999999999999999999999999998643 4777766442 234567899999
Q ss_pred hhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHH
Q 042823 398 EMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLM 452 (477)
Q Consensus 398 ~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~ 452 (477)
.+|.+++|+|+.+|++.++..+|. +++.++++.+|.|+||.|+|+||+.+|
T Consensus 83 ~~D~~~~g~i~~~el~~~~~~~~~----~~~~~~~~~~D~d~dG~is~~EF~~~~ 133 (134)
T d1jfja_ 83 LMDVDGDGKLTKEEVTSFFKKHGI----EKVAEQVMKADANGDGYITLEEFLEFS 133 (134)
T ss_dssp HHCCSSSSEEEHHHHHHHHTTTTC----HHHHHHHHHHHCSSSSEEEHHHHHHHH
T ss_pred ccccccCCcccHHHHHHHHHhcCc----HHHHHHHHHHCCCCCCCCCHHHHHHHh
Confidence 999999999999999999987664 578889999999999999999999987
|
| >d1s6ia_ a.39.1.5 (A:) Calcium-dependent protein kinase sk5 CLD {Soybean (Glycine max) [TaxId: 3847]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium-dependent protein kinase sk5 CLD species: Soybean (Glycine max) [TaxId: 3847]
Probab=99.68 E-value=5.2e-18 Score=146.49 Aligned_cols=137 Identities=33% Similarity=0.536 Sum_probs=117.4
Q ss_pred ccCCchhhHHHHHHhhhcCCCCCCCccHHHHHHHHHhhCCCCCHHHHHHHHHHhhccc----hHHHHHhcC----ChHHH
Q 042823 318 EYLPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNSS----TLESLCENL----PTKEK 389 (477)
Q Consensus 318 ~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~----~~~~~~~~~----~~~~~ 389 (477)
..+++++...++++|..+|.+++|.|+.+||..++..++..++..++..+++.+|.+. ++.++.... .....
T Consensus 2 ~~Lt~~ei~~l~~~F~~~D~d~dG~Is~~e~~~~l~~l~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~ 81 (182)
T d1s6ia_ 2 ERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTIDYGEFIAATVHLNKLERE 81 (182)
T ss_dssp CSSSCTTTCSHHHHHHTTSSSSSSCEEHHHHHHHHTTTTCCCCHHHHHHHHHHTCTTCSSEECHHHHHHHHTTSSSSCCC
T ss_pred CCCCHHHHHHHHHHHHHHcCCCcCCCCHHHHHHHHHHcCCccccccchhhhhhhhccccccchHHHHHHHHHhhcccccH
Confidence 3567778889999999999999999999999999999999999999999999997542 455554321 12223
Q ss_pred HHHHHHhhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhhh
Q 042823 390 QKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIY 456 (477)
Q Consensus 390 ~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~~ 456 (477)
+.++.+|+.+|.+++|+|+.++|+.++..+| +++++++.+++.+|.|+||.|+|+||+.+|....
T Consensus 82 e~l~~aF~~~D~d~~G~i~~~el~~~l~~~g--l~~~ev~~~f~~~D~d~DG~Is~~EF~~~m~~~~ 146 (182)
T d1s6ia_ 82 ENLVSAFSYFDKDGSGYITLDEIQQACKDFG--LDDIHIDDMIKEIDQDNDGQIDYGEFAAMMRKRK 146 (182)
T ss_dssp CSTHHHHHHTTTTCSSEEEHHHHHHTTTTTT--CCTTHHHHHHHHHCSSSSSEEETTHHHHTTSCCC
T ss_pred HHHHHHHHHHhhcCCCccchhhhhhhhhhcC--ccHHHHHHHHHHhhcCCCCeEeHHHHHHHHHhCc
Confidence 4688999999999999999999999999887 6788999999999999999999999999997543
|
| >d1wrka1 a.39.1.5 (A:4-85) Troponin C {Human (Homo sapiens), cardiac isoform [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Human (Homo sapiens), cardiac isoform [TaxId: 9606]
Probab=99.67 E-value=1.4e-16 Score=117.02 Aligned_cols=78 Identities=22% Similarity=0.354 Sum_probs=72.7
Q ss_pred HHHHhcCChHHHHHHHHHhhhhcCCC-CCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhh
Q 042823 378 ESLCENLPTKEKQKLMEKFREMDTDN-SDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDI 455 (477)
Q Consensus 378 ~~~~~~~~~~~~~~l~~~F~~~D~~~-~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~ 455 (477)
......++++++++++++|+.||+|+ +|+|+..||+.+|+.+|.++++++++++++.+|.+++|.|+|+||+.+|.+.
T Consensus 3 k~~~~~ls~eq~~~~~~~F~~fD~d~~~G~I~~~el~~~l~~lg~~~t~~el~~~i~~~D~d~~G~I~f~eFl~im~~k 81 (82)
T d1wrka1 3 KAAVEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRS 81 (82)
T ss_dssp HHHHHHCCHHHHHHHHHHHHHHTTTCTTSSBCHHHHHHHHHHTTCCCCHHHHHHHHHTTCTTCCSSBCHHHHHHHHHHC
T ss_pred HHHHhhCCHHHHHHHHHHHHHHcCcCCCCeEeHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHhh
Confidence 34566789999999999999999995 7999999999999999999999999999999999999999999999999763
|
| >d1avsa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=99.65 E-value=2e-16 Score=116.26 Aligned_cols=74 Identities=26% Similarity=0.375 Sum_probs=70.4
Q ss_pred hcCChHHHHHHHHHhhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhh
Q 042823 382 ENLPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDI 455 (477)
Q Consensus 382 ~~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~ 455 (477)
..|+++++++++++|+.||.|++|.|+.+||+.+|+.+|.++++.+++++++.+|.+++|.|+|+||+.+|.+.
T Consensus 6 ~~Lt~~~i~el~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~s~~e~~~~~~~~D~d~~g~I~~~eF~~~m~~k 79 (81)
T d1avsa_ 6 AFLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQ 79 (81)
T ss_dssp HHBCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTCCSSEEHHHHHHHHHHH
T ss_pred ccCCHHHHHHHHHHHHHHcCCCCCeEchhHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHHh
Confidence 35788899999999999999999999999999999999999999999999999999999999999999999764
|
| >d1f54a_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.64 E-value=1.5e-16 Score=115.88 Aligned_cols=74 Identities=35% Similarity=0.516 Sum_probs=70.3
Q ss_pred hcCChHHHHHHHHHhhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhh
Q 042823 382 ENLPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDI 455 (477)
Q Consensus 382 ~~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~ 455 (477)
..++++++++++++|+.||.|++|+|+.+||+.+|+.+|..+++.++..+++.+|.+++|.|+|+||+.+|.+.
T Consensus 2 ~~lt~eqi~el~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~t~~e~~~~~~~~D~~~~g~I~~~eF~~~m~~~ 75 (77)
T d1f54a_ 2 SNLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLALMSRQ 75 (77)
T ss_dssp CCCCHHHHHHHHHHHHHTCTTCSSEEEHHHHHHHHHHHTCCCCHHHHHHHHHTTCCSSCCEEEHHHHHHHHTTS
T ss_pred CCCCHHHHHHHHHHHHHHcCCCCCeEChHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHHh
Confidence 35788999999999999999999999999999999999999999999999999999999999999999998754
|
| >d2opoa1 a.39.1.10 (A:6-86) Polcalcin Che a 3 {Pigweed (Chenopodium album) [TaxId: 3559]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Polcalcin domain: Polcalcin Che a 3 species: Pigweed (Chenopodium album) [TaxId: 3559]
Probab=99.64 E-value=3.5e-16 Score=114.87 Aligned_cols=81 Identities=26% Similarity=0.363 Sum_probs=70.3
Q ss_pred ChHHHHHHHHHhhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhhhCCCcHHHH
Q 042823 385 PTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIYKLETPELL 464 (477)
Q Consensus 385 ~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~l 464 (477)
+++++++++++|+.||+|++|+|+.+||+.+|+.+| .+++.++..+++.+|.|++|.|+|+||+.+|... ....+++
T Consensus 1 T~ee~~e~~~~F~~~D~d~~G~I~~~El~~~l~~lg-~~~~~ei~~~~~~~D~d~~G~I~~~EF~~~~~~~--~~~~~e~ 77 (81)
T d2opoa1 1 TPQDIADRERIFKRFDTNGDGKISSSELGDALKTLG-SVTPDEVRRMMAEIDTDGDGFISFDEFTDFARAN--RGLVKDV 77 (81)
T ss_dssp CHHHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHTTT-TCCHHHHHHHHHHHCTTCSSEECHHHHHHHHHHC--TTTHHHH
T ss_pred CHHHHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHhh-cCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHHC--ccchHHH
Confidence 457889999999999999999999999999999999 6899999999999999999999999999988653 2233455
Q ss_pred HHHH
Q 042823 465 EKAF 468 (477)
Q Consensus 465 ~~aF 468 (477)
.+||
T Consensus 78 ~~~F 81 (81)
T d2opoa1 78 SKIF 81 (81)
T ss_dssp HHHC
T ss_pred HhhC
Confidence 5554
|
| >d1qv0a_ a.39.1.5 (A:) Calcium-regulated photoprotein {Hydrozoa (Obelia longissima), obelin [TaxId: 32570]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium-regulated photoprotein species: Hydrozoa (Obelia longissima), obelin [TaxId: 32570]
Probab=99.64 E-value=1.2e-15 Score=132.51 Aligned_cols=135 Identities=19% Similarity=0.197 Sum_probs=102.7
Q ss_pred CchhhHHHHHHhhhcCCCCCCCccHHHHHHHH-----HhhCCCCCHHHHHHHHHHhhcc---------chHHHHHhcC--
Q 042823 321 PDEETQALKEKFIEMDTDKNGTLSYDELRAGL-----TKVGSMLTEFDVKHLMEAVKNS---------STLESLCENL-- 384 (477)
Q Consensus 321 ~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l-----~~~~~~~~~~~~~~~~~~~d~~---------~~~~~~~~~~-- 384 (477)
.++.+..++.+|..+|.|++|.|+.+||..++ +.+|..++..+....+...+.. ..+.++...+
T Consensus 9 ~~~~i~r~k~~F~~~D~d~dG~I~~~E~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~e~~~~~~~ 88 (189)
T d1qv0a_ 9 NPRWIKRHKHMFDFLDINGNGKITLDEIVSKASDDICAKLEATPEQTKRHQVCVEAFFRGCGMEYGKEIAFPQFLDGWKQ 88 (189)
T ss_dssp CHHHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHTHHHHTTCCHHHHHHHHHHHHHHHHHTTCCTTCCBCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHhhhccccCCCceehHHHHHHHHH
Confidence 45667789999999999999999999997654 4567777777776665554311 1222222111
Q ss_pred -------------ChHHHHHHHHHhhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHH
Q 042823 385 -------------PTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNL 451 (477)
Q Consensus 385 -------------~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~ 451 (477)
.....+.+..+|+.+|+|++|+|+.+|++.++..+|..+++++++.+++.+|.|+||.|+|+||+.+
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~is~~E~~~~l~~~g~~~~~~~~~~lf~~~D~d~dG~Is~~EF~~~ 168 (189)
T d1qv0a_ 89 LATSELKKWARNEPTLIREWGDAVFDIFDKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDNAGDLDVDEMTRQ 168 (189)
T ss_dssp HHHHHHHHHHTTCCCHHHHHHHHHHHHTC----CEECHHHHHHHHHHHSSCCCHHHHHHHHHHSCCCTTSCEEHHHHHHH
T ss_pred HHHHhhhccccccHHHHHHHHHHHHHHHccCCCCcccchhhHHHHHhcCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHH
Confidence 1223446778999999999999999999999999999999999999999999999999999999998
Q ss_pred HHhh
Q 042823 452 MTDI 455 (477)
Q Consensus 452 ~~~~ 455 (477)
+...
T Consensus 169 ~~~~ 172 (189)
T d1qv0a_ 169 HLGF 172 (189)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 8753
|
| >d1uhka1 a.39.1.5 (A:3-189) Calcium-regulated photoprotein {Jellyfish (Aequorea aequorea), aequorin [TaxId: 168712]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium-regulated photoprotein species: Jellyfish (Aequorea aequorea), aequorin [TaxId: 168712]
Probab=99.63 E-value=1.3e-15 Score=132.01 Aligned_cols=136 Identities=21% Similarity=0.201 Sum_probs=104.9
Q ss_pred CchhhHHHHHHhhhcCCCCCCCccHHHHHHHHHh-----hCCCCCHHHHHHHHHHhhc---------cchHHHHHh----
Q 042823 321 PDEETQALKEKFIEMDTDKNGTLSYDELRAGLTK-----VGSMLTEFDVKHLMEAVKN---------SSTLESLCE---- 382 (477)
Q Consensus 321 ~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~-----~~~~~~~~~~~~~~~~~d~---------~~~~~~~~~---- 382 (477)
++....+++++|..+|.|++|.|+.+||..++.. ++..++..+....+...+. ...+.++..
T Consensus 7 ~p~~~~~~k~~F~~~D~d~dG~Is~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (187)
T d1uhka1 7 NPRWIGRHKHMFNFLDVNHNGKISLDEMVYKASDIVINNLGATPEQAKRHKDAVEAFFGGAGMKYGVETDWPAYIEGWKK 86 (187)
T ss_dssp CHHHHHHHHHHHHHHCTTCCSEEEHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHTTCCTTCEEEHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHHHHHHhccCccHHHHHHHHHHhhhhcccccccccccHHHHHHHHHH
Confidence 3455778999999999999999999999776654 5666666655554443321 111222111
Q ss_pred -----------cCChHHHHHHHHHhhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHH
Q 042823 383 -----------NLPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNL 451 (477)
Q Consensus 383 -----------~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~ 451 (477)
.........+..+|+.+|+|++|+|+.+||+.+|..+|..+++++++.+++.+|.|+||.|+|+||+++
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~El~~~l~~~g~~~~~~~~~~lf~~~D~d~dG~Is~~EF~~~ 166 (187)
T d1uhka1 87 LATDELEKYAKNEPTLIRIWGDALFDIVDKDQNGAITLDEWKAYTKAAGIIQSSEDCEETFRVCDIDESGQLDVDEMTRQ 166 (187)
T ss_dssp HHHHHHHHHHTTCCCHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHTSCCSHHHHHHHHHHSCCCTTSCEEHHHHHHH
T ss_pred HHHHHHHhhhhhhHHHHHHHHHHHHHHHccCCCcccchHHHHHHHHHhCCCccHHHHHHHHHHhCCCCCCCEeHHHHHHH
Confidence 112223456889999999999999999999999999999999999999999999999999999999998
Q ss_pred HHhhh
Q 042823 452 MTDIY 456 (477)
Q Consensus 452 ~~~~~ 456 (477)
+...+
T Consensus 167 ~~~~~ 171 (187)
T d1uhka1 167 HLGFW 171 (187)
T ss_dssp HHHHH
T ss_pred HHHhc
Confidence 86543
|
| >d2pq3a1 a.39.1.5 (A:3-75) Calmodulin {Rattus norvegicus [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Rattus norvegicus [TaxId: 10116]
Probab=99.63 E-value=2.4e-16 Score=113.37 Aligned_cols=72 Identities=32% Similarity=0.503 Sum_probs=68.9
Q ss_pred cCChHHHHHHHHHhhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHh
Q 042823 383 NLPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTD 454 (477)
Q Consensus 383 ~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~ 454 (477)
.|+++++.+++++|+.||.|++|+|+.+||+.+|+.+|..++++++..+++.+|.+++|.|+|+||+.+|.+
T Consensus 1 qLs~eei~el~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~s~~~~~~~~~~~D~d~~g~I~f~eF~~~m~~ 72 (73)
T d2pq3a1 1 QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMAR 72 (73)
T ss_dssp CCCHHHHHHHHHHHHHTCTTSSSEEEGGGHHHHHHHTTCCCCHHHHHHHHHHHCTTCSSEEEHHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHHHHcCCCCceEeHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHhc
Confidence 367889999999999999999999999999999999999999999999999999999999999999999875
|
| >d5pala_ a.39.1.4 (A:) Parvalbumin {Leopard shark (Triakis semifasciata) [TaxId: 30493]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Parvalbumin species: Leopard shark (Triakis semifasciata) [TaxId: 30493]
Probab=99.63 E-value=6.1e-16 Score=120.22 Aligned_cols=66 Identities=30% Similarity=0.507 Sum_probs=61.6
Q ss_pred HHHHHHHhhhhcCCCCCCcCHHHHHHHHHHc---CCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHh
Q 042823 389 KQKLMEKFREMDTDNSDTLTLSELKAGLAKL---GSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTD 454 (477)
Q Consensus 389 ~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~---g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~ 454 (477)
.++++++|+.||+|++|+|+.+||+.+|+.+ |..+++++++++++.+|.|+||.|+|+||+.+|.+
T Consensus 40 ~~~l~~~F~~~D~d~~G~I~~~El~~~l~~l~~~g~~~~~~e~~~~~~~~D~d~dG~I~~~EF~~~m~~ 108 (109)
T d5pala_ 40 DAQVKEVFEILDKDQSGFIEEEELKGVLKGFSAHGRDLNDTETKALLAAGDSDHDGKIGADEFAKMVAQ 108 (109)
T ss_dssp HHHHHHHHHHHCTTCSSEECHHHHHTHHHHHCTTCCCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHH
T ss_pred HHHHHHHHhhhcCCCCCeEcHHHHHHHHHHhhhccCcCCHHHHHHHHHHhCCCCCCCEeHHHHHHHHHh
Confidence 4578999999999999999999999999876 78899999999999999999999999999999864
|
| >d1pvaa_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Parvalbumin species: Pike (Esox lucius) [TaxId: 8010]
Probab=99.61 E-value=7.7e-16 Score=119.64 Aligned_cols=66 Identities=30% Similarity=0.521 Sum_probs=61.3
Q ss_pred HHHHHHHhhhhcCCCCCCcCHHHHHHHHHHc---CCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHh
Q 042823 389 KQKLMEKFREMDTDNSDTLTLSELKAGLAKL---GSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTD 454 (477)
Q Consensus 389 ~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~---g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~ 454 (477)
.+.++.+|+.||+|++|+|+.+||+.+|+.+ |..+++++++.+++.+|.|+||.|+|+||+.+|.+
T Consensus 40 ~~~~~~~F~~~D~d~~G~I~~~El~~~l~~l~~~g~~ls~~ev~~~~~~~D~d~dG~I~~~EF~~~m~~ 108 (109)
T d1pvaa_ 40 ANDVKKVFKAIDADASGFIEEEELKFVLKSFAADGRDLTDAETKAFLKAADKDGDGKIGIDEFETLVHE 108 (109)
T ss_dssp HHHHHHHHHHHCTTCSSSBCHHHHHTGGGGTCTTCCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHC
T ss_pred HHHHHHHhhCccCCCcCeEcHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHCCCCcCcEeHHHHHHHHHh
Confidence 4578899999999999999999999999887 77899999999999999999999999999999864
|
| >d1wdcb_ a.39.1.5 (B:) Myosin Essential Chain {Bay scallop (Aequipecten irradians) [TaxId: 31199]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Myosin Essential Chain species: Bay scallop (Aequipecten irradians) [TaxId: 31199]
Probab=99.61 E-value=1.7e-15 Score=124.94 Aligned_cols=90 Identities=23% Similarity=0.464 Sum_probs=81.9
Q ss_pred CChHHHHHHHHHhhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhhhC-CCcHH
Q 042823 384 LPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIYK-LETPE 462 (477)
Q Consensus 384 ~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~~~-~~~~~ 462 (477)
|+++++++++++|+.||+|++|.|+.+||..+|+.+|.++++.++..+++ +++|.|+|++|+.++..... ...++
T Consensus 1 L~~~qi~e~~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~el~~~~~----~~~~~i~~~eF~~~~~~~~~~~~~~~ 76 (142)
T d1wdcb_ 1 LPQKQIQEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLK----EAPGPLNFTMFLSIFSDKLSGTDSEE 76 (142)
T ss_dssp CCHHHHHHHHHHHHHHCTTCSSSCCHHHHHHHHHHHSSCCCHHHHHHHHT----TSSSCCCHHHHHHHHHHHTCSCCCHH
T ss_pred CCHHHHHHHHHHHHHHcCCCCCcCChHHHHHHHHHhhcCCCHHHHHHHHH----hccCccccccccccccccccccchhh
Confidence 46788999999999999999999999999999999999999999998885 56799999999999987655 55678
Q ss_pred HHHHHHHHhccCCCC
Q 042823 463 LLEKAFQYLDKNSDQ 477 (477)
Q Consensus 463 ~l~~aF~~~D~d~~G 477 (477)
+++.||+.||+|++|
T Consensus 77 ~l~~aF~~~D~d~~G 91 (142)
T d1wdcb_ 77 TIRNAFAMFDEQETK 91 (142)
T ss_dssp HHHHHHHTTCTTCCS
T ss_pred hHHHhhhhhcccCCC
Confidence 999999999999998
|
| >d1jc2a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=99.58 E-value=1.9e-15 Score=108.98 Aligned_cols=66 Identities=26% Similarity=0.453 Sum_probs=63.3
Q ss_pred HHHHHHHhhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHh
Q 042823 389 KQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTD 454 (477)
Q Consensus 389 ~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~ 454 (477)
.++++.+|+.||++++|+|+.+||+.+|+.+|..+++++++.+++.+|.+++|.|+|+||+.+|..
T Consensus 8 eeel~~~F~~fD~~~~G~I~~~el~~~l~~lg~~~~~~e~~~~~~~~D~d~dg~I~~~EF~~~m~~ 73 (75)
T d1jc2a_ 8 EEELANCFRIFDKNADGFIDIEELGEILRATGEHVIEEDIEDLMKDSDKNNDGRIDFDEFLKMMEG 73 (75)
T ss_dssp HHHHHHHHHHHCCSTTSSEEHHHHHHHHHHSSSCCCHHHHHHHHHHHCSSSCSEECHHHHHHHHHT
T ss_pred HHHHHHHHHHHcCCCcCeEcHHHHHHHHHhcCCCccHHHHHHHHHHhCCCCCCcEeHHHHHHHHHh
Confidence 468999999999999999999999999999999999999999999999999999999999999864
|
| >d1fw4a_ a.39.1.5 (A:) Calmodulin {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.58 E-value=1.2e-15 Score=106.82 Aligned_cols=63 Identities=33% Similarity=0.664 Sum_probs=60.8
Q ss_pred HHHHHHhhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHH
Q 042823 390 QKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLM 452 (477)
Q Consensus 390 ~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~ 452 (477)
++++++|+.||+|++|+|+.+||+.+++.+|.++++.+++.+++.+|.|++|.|+|+||+++|
T Consensus 3 eel~~aF~~fD~d~~G~I~~~el~~~l~~lg~~~~~~e~~~l~~~~D~d~~g~I~~~eF~~~m 65 (65)
T d1fw4a_ 3 EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 65 (65)
T ss_dssp HHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHTTCTTCSSSEEHHHHHHHC
T ss_pred HHHHHHHHHHcCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHcCCCCCCcEeHHHHHHHC
Confidence 578999999999999999999999999999999999999999999999999999999999864
|
| >d1auib_ a.39.1.5 (B:) Calcineurin regulatory subunit (B-chain) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcineurin regulatory subunit (B-chain) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.58 E-value=1.1e-15 Score=129.61 Aligned_cols=136 Identities=23% Similarity=0.336 Sum_probs=108.8
Q ss_pred hhhccCCchhhHHHHHHhhhcCCCCCCCccHHHHHHHHHhhCCCCCHHHHHHHHHHhhccc----hHHHHHhcC-----C
Q 042823 315 VIVEYLPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNSS----TLESLCENL-----P 385 (477)
Q Consensus 315 ~i~~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~----~~~~~~~~~-----~ 385 (477)
.|...++.++...+++.|..+|.+++|.|+.+||.+++.... .+ .++++++.+|.++ ++.+|+..+ .
T Consensus 5 ~~~t~ft~eei~~l~~~F~~~D~d~~G~I~~~E~~~~~~~~~-~~---~~~~l~~~~d~~~~g~i~~~EFl~~~~~~~~~ 80 (165)
T d1auib_ 5 EMCSHFDADEIKRLGKRFKKLDLDNSGSLSVEEFMSLPELQQ-NP---LVQRVIDIFDTDGNGEVDFKEFIEGVSQFSVK 80 (165)
T ss_dssp CCCCSCCHHHHHHHHHHHHHHCTTCCSEECHHHHTTSHHHHT-CT---THHHHHHHHCTTCSSSEEHHHHHHHHGGGCTT
T ss_pred HHcCCCCHHHHHHHHHHHHHHCCCCCCCCcHHHHHHhhhccC-CH---HHHHHHHHHccccchhhhhhhhhhhccccccc
Confidence 356778999999999999999999999999999987655433 22 3566788887543 466665433 2
Q ss_pred hHHHHHHHHHhhhhcCCCCCCcCHHHHHHHHHH-cCCCCC----HHHHHHHHHHhcCCCCCcccHHHHHHHHHh
Q 042823 386 TKEKQKLMEKFREMDTDNSDTLTLSELKAGLAK-LGSALE----ESEVNQYMEAGDIDGNGNIDSIEFVNLMTD 454 (477)
Q Consensus 386 ~~~~~~l~~~F~~~D~~~~G~I~~~el~~~l~~-~g~~~~----~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~ 454 (477)
......++.+|+.+|.|++|.|+.+||..+++. .|..++ +..++.++..+|.|+||.|+|+||+.+|..
T Consensus 81 ~~~~~~~~~~f~~~d~d~~g~Is~~el~~~l~~~~~~~~~~~~~~~~~~~~~~~~D~~~dG~Is~~EF~~i~~~ 154 (165)
T d1auib_ 81 GDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTIINADKDGDGRISFEEFCAVVGG 154 (165)
T ss_dssp CCHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHCTTSSSSEEHHHHHHHHGG
T ss_pred hhhHHHHHHHHHHhcccccccccHHHHHHHHHHhccccCchHHHHHHHHHHHHHcCCCCCCcEeHHHHHHHHhc
Confidence 235678999999999999999999999999977 466555 445778899999999999999999999874
|
| >d1g8ia_ a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Frequenin (neuronal calcium sensor 1) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.55 E-value=8.6e-15 Score=126.63 Aligned_cols=147 Identities=16% Similarity=0.191 Sum_probs=114.4
Q ss_pred cCCchhhHHHHHHhhhcCCCCCCCccHHHHHHHHHhhCCCCCH-HHHHHHHHHhhccc----hHHHHHhcCCh----HHH
Q 042823 319 YLPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTE-FDVKHLMEAVKNSS----TLESLCENLPT----KEK 389 (477)
Q Consensus 319 ~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~-~~~~~~~~~~d~~~----~~~~~~~~~~~----~~~ 389 (477)
.++..++..+...|.. .+++|.++.+++...+..++..... .-++.++..+|.++ ++.+|+..+.. ...
T Consensus 18 ~fs~~Ei~~l~~~F~~--~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~if~~~d~~~dg~I~~~EF~~~l~~~~~~~~~ 95 (187)
T d1g8ia_ 18 YFTEKEVQQWYKGFIK--DCPSGQLDAAGFQKIYKQFFPFGDPTKFATFVFNVFDENKDGRIEFSEFIQALSVTSRGTLD 95 (187)
T ss_dssp SSCHHHHHHHHHHHHH--HCTTSEEEHHHHHHHHHHHCTTSCTHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHHCCHH
T ss_pred CCCHHHHHHHHHHHHH--HCCCCCcCHHHHHHHHHHhcCCCCHHHHHHHHHHHhCcCCCCCCcHHHHHHHHHHhccCchh
Confidence 3577777777777764 4578999999999999998876654 44577889887543 47776654432 235
Q ss_pred HHHHHHhhhhcCCCCCCcCHHHHHHHHHHcC------------CCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhhhC
Q 042823 390 QKLMEKFREMDTDNSDTLTLSELKAGLAKLG------------SALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIYK 457 (477)
Q Consensus 390 ~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g------------~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~~~ 457 (477)
+.++.+|+.||.|++|.|+.+|+..++..+. ....++.++.+++.+|.|+||.|+|+||+.++..-
T Consensus 96 e~l~~~F~~~D~d~dG~i~~~El~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~if~~~D~d~dG~Is~~EF~~~~~~~-- 173 (187)
T d1g8ia_ 96 EKLRWAFKLYDLDNDGYITRNEMLDIVDAIYQMVGNTVELPEEENTPEKRVDRIFAMMDKNADGKLTLQEFQEGSKAD-- 173 (187)
T ss_dssp HHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHHHC-----CCGGGSSHHHHHHHHHHHHCSSCSSEEEHHHHHHHHHHC--
T ss_pred hhHHHHHHHHhcCCCCeEcHHHHHHHHHHHhhhhcccccCchhhccHHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHC--
Confidence 6789999999999999999999999887541 12335678999999999999999999999998753
Q ss_pred CCcHHHHHHHHHHhcc
Q 042823 458 LETPELLEKAFQYLDK 473 (477)
Q Consensus 458 ~~~~~~l~~aF~~~D~ 473 (477)
..+.++|..||.
T Consensus 174 ----p~~~~~l~~~~~ 185 (187)
T d1g8ia_ 174 ----PSIVQALSLYDG 185 (187)
T ss_dssp ----HHHHHHHCCBTT
T ss_pred ----HHHHHHHHHhhc
Confidence 368888888874
|
| >d1wdcc_ a.39.1.5 (C:) Myosin Regulatory Chain {Bay scallop (Aequipecten irradians) [TaxId: 31199]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Myosin Regulatory Chain species: Bay scallop (Aequipecten irradians) [TaxId: 31199]
Probab=99.55 E-value=3.4e-15 Score=124.61 Aligned_cols=93 Identities=17% Similarity=0.159 Sum_probs=82.8
Q ss_pred CChHHHHHHHHHhhhhcC--CCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhhhC--CC
Q 042823 384 LPTKEKQKLMEKFREMDT--DNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIYK--LE 459 (477)
Q Consensus 384 ~~~~~~~~l~~~F~~~D~--~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~~~--~~ 459 (477)
|+.+++++++++|..||. +++|+|+.+||+.+|+++|..++++++..++ ..+.+++|.|+|+||+.++..... ..
T Consensus 1 Ls~eqi~~l~~~F~~fD~~~~~dG~I~~~el~~~l~~lG~~~t~~e~~~~~-~~~~~~~~~i~~~eFl~~~~~~~~~~~~ 79 (152)
T d1wdcc_ 1 LSQDEIDDLKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRNEDVFAVG-GTHKMGEKSLPFEEFLPAYEGLMDCEQG 79 (152)
T ss_dssp CCHHHHHHHHHHHHHHHHHTCSSSCEEGGGHHHHHHHTTCCCCHHHHHHTT-CCSSTTSCEECHHHHHHHHHHHTTSCCC
T ss_pred CCHHHHHHHHHHHHHHCcCCCCCCeECHHHHHHHHHHhccCccHhhhhhhh-hhhccccccccccccccccccccccchh
Confidence 467888999999999994 8999999999999999999999999998764 568888999999999999876544 45
Q ss_pred cHHHHHHHHHHhccCCCC
Q 042823 460 TPELLEKAFQYLDKNSDQ 477 (477)
Q Consensus 460 ~~~~l~~aF~~~D~d~~G 477 (477)
..+++++||+.||+|++|
T Consensus 80 ~~~~l~~aF~~~D~~~~G 97 (152)
T d1wdcc_ 80 TFADYMEAFKTFDREGQG 97 (152)
T ss_dssp CHHHHHHHHHTTCSSSSS
T ss_pred HHHhhhhhhhccccccCc
Confidence 678999999999999998
|
| >d1exra_ a.39.1.5 (A:) Calmodulin {Ciliate (Paramecium tetraurelia) [TaxId: 5888]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Ciliate (Paramecium tetraurelia) [TaxId: 5888]
Probab=99.55 E-value=6.7e-15 Score=121.93 Aligned_cols=95 Identities=32% Similarity=0.489 Sum_probs=86.5
Q ss_pred cCChHHHHHHHHHhhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhhhC-CCcH
Q 042823 383 NLPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIYK-LETP 461 (477)
Q Consensus 383 ~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~~~-~~~~ 461 (477)
.|+++++++++++|..+|++++|.|+.+||..++...|..+++..+..+++.+|.+++|.|+|+||+.++..... ....
T Consensus 2 ~lt~~e~~~l~~~F~~~D~~~~G~Is~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~ 81 (146)
T d1exra_ 2 QLTEEQIAEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLSLMARKMKEQDSE 81 (146)
T ss_dssp CCCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHTCCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHcCCCCCeECHHHHHHHHHhcCCCCCHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHhhccChH
Confidence 578888999999999999999999999999999999999999999999999999999999999999998865433 2345
Q ss_pred HHHHHHHHHhccCCCC
Q 042823 462 ELLEKAFQYLDKNSDQ 477 (477)
Q Consensus 462 ~~l~~aF~~~D~d~~G 477 (477)
++++.+|+.+|+|++|
T Consensus 82 ~~~~~~F~~~D~d~~G 97 (146)
T d1exra_ 82 EELIEAFKVFDRDGNG 97 (146)
T ss_dssp HHHHHHHHHHSTTCSS
T ss_pred HHHHHHHHHhCCCCCC
Confidence 7899999999999998
|
| >d1jbaa_ a.39.1.5 (A:) Guanylate cyclase activating protein 2, GCAP-2 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Guanylate cyclase activating protein 2, GCAP-2 species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.54 E-value=3.2e-14 Score=123.20 Aligned_cols=134 Identities=18% Similarity=0.193 Sum_probs=105.8
Q ss_pred CchhhHHHHHHhhhcCCC-CCCCccHHHHHHHHHhhCCCCCHHHHHHHHHHhhccc----hHHHHHhcCC----hHHHHH
Q 042823 321 PDEETQALKEKFIEMDTD-KNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNSS----TLESLCENLP----TKEKQK 391 (477)
Q Consensus 321 ~~~~~~~l~~~F~~~D~~-~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~----~~~~~~~~~~----~~~~~~ 391 (477)
+.....++++.|..|..+ ++|.|+.+||.++|...+...+...++.+++.+|.++ ++.+|+..+. ....+.
T Consensus 16 ~~~~~~ei~~~~~~F~~~~~~G~i~~~Ef~~~l~~~~~~~~~~~~~~lf~~~D~d~dG~I~f~Ef~~~l~~~~~~~~~~~ 95 (189)
T d1jbaa_ 16 GAADAAQLQEWYKKFLEECPSGTLFMHEFKRFFKVPDNEEATQYVEAMFRAFDTNGDNTIDFLEYVAALNLVLRGTLEHK 95 (189)
T ss_dssp CHHHHHHHHHHHHHHHSSSTTCCEEHHHHHHHHHCCSSSTTHHHHHHHHHHHCCSSSSEECHHHHHHHHHHHSSCCCTHH
T ss_pred CccCHHHHHHHHHHhcccCCCCeeeHHHHHHHHHHcCCCccHHHHHHHHHHhccCCCCeEeehhHHHHHHhhcccchHHH
Confidence 444555677777776544 6999999999999999999899999999999998543 4666655432 233467
Q ss_pred HHHHhhhhcCCCCCCcCHHHHHHHHHHcC----------------C-CCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHh
Q 042823 392 LMEKFREMDTDNSDTLTLSELKAGLAKLG----------------S-ALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTD 454 (477)
Q Consensus 392 l~~~F~~~D~~~~G~I~~~el~~~l~~~g----------------~-~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~ 454 (477)
++.+|+.||.|++|.|+.+|+..++..+. . ..+++.++.+++.+|.|+||.|+|+||+.++..
T Consensus 96 ~~~~F~~~D~d~~g~i~~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~if~~~D~d~dG~Is~~EF~~~~~~ 175 (189)
T d1jbaa_ 96 LKWTFKIYDKDRNGCIDRQELLDIVESIYKLKKACSVEVEAEQQGKLLTPEEVVDRIFLLVDENGDGQLSLNEFVEGARR 175 (189)
T ss_dssp HHHHHHHHCSSCSSCBCHHHHHHHHHHHHHHHHHSSCCTTSSTTTCCCCHHHHHHHHHHHHCCSCCSCBCHHHHHHHHTT
T ss_pred HHHHHhhhccCCCCcccHhHHHHHHHHHHHhhccccccchhhhhccccchHHHHHHHHHHhCCCCCCcEeHHHHHHHHHh
Confidence 88999999999999999999998876531 1 122456789999999999999999999999874
|
| >d1oqpa_ a.39.1.5 (A:) Caltractin (centrin 2) {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Caltractin (centrin 2) species: Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]
Probab=99.54 E-value=7e-15 Score=106.88 Aligned_cols=67 Identities=30% Similarity=0.586 Sum_probs=64.1
Q ss_pred HHHHHHHHhhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHh
Q 042823 388 EKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTD 454 (477)
Q Consensus 388 ~~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~ 454 (477)
..++++++|+.||+|++|+|+.+||+.+|+.+|.+++..++..+++.+|.|++|.|+|+||+.+|.+
T Consensus 7 ~~e~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~e~~~~~~~~D~d~~G~I~~~EF~~~m~k 73 (77)
T d1oqpa_ 7 SREEILKAFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEADRNDDNEIDEDEFIRIMKK 73 (77)
T ss_dssp HHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHHTCCCCHHHHHHHHHHHCCSSSSEECHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCCCEechHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHc
Confidence 4568999999999999999999999999999999999999999999999999999999999999975
|
| >d1ij5a_ a.39.1.9 (A:) Cbp40 (plasmodial specific CaII-binding protein LAV1-2) {Physarum polycephalum [TaxId: 5791]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Cbp40 (plasmodial specific CaII-binding protein LAV1-2) domain: Cbp40 (plasmodial specific CaII-binding protein LAV1-2) species: Physarum polycephalum [TaxId: 5791]
Probab=99.54 E-value=6.7e-15 Score=138.77 Aligned_cols=138 Identities=21% Similarity=0.258 Sum_probs=113.5
Q ss_pred hccCCchhhHHHHHHhhhcCCCCCCCccHHHHHHHHHhhCCCCCHHHHHHHHHHhhccc----hHHHHHhcC--------
Q 042823 317 VEYLPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNSS----TLESLCENL-------- 384 (477)
Q Consensus 317 ~~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~----~~~~~~~~~-------- 384 (477)
...++.++...++++|..+|.+++|+|+.+||..+|..+|..++..++..++..+|.++ ++.+|+...
T Consensus 113 ~~~l~~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~ 192 (321)
T d1ij5a_ 113 KPMLSEEDTNILRQLFLSSAVSGSGKFSFQDLKQVLAKYADTIPEGPLKKLFVMVENDTKGRMSYITLVAVANDLAALVA 192 (321)
T ss_dssp CCCCCHHHHHHHHHHHTSSSSTTSSCCCHHHHHHHHHHHHTTSCSSHHHHHHHHHHHCCSSTHHHHHHTTSHHHHHTSCC
T ss_pred cccCCHHHHHHHHHHHHHHcCCCCCeEcHHHHHHHHHHcCCcccHHHHHHHHHHHhhcCCccccchhhhhhhhhhhhhhH
Confidence 34456777888999999999999999999999999999999999999999999987442 244432110
Q ss_pred ---------------------------C-h---------------------------HHHHHHHHHhhhhcCCCCCCcCH
Q 042823 385 ---------------------------P-T---------------------------KEKQKLMEKFREMDTDNSDTLTL 409 (477)
Q Consensus 385 ---------------------------~-~---------------------------~~~~~l~~~F~~~D~~~~G~I~~ 409 (477)
. . .....+..+|..+|.|++|+|+.
T Consensus 193 ~F~~~d~d~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ef~~~~~~~~~~~~~F~~~D~d~~G~Is~ 272 (321)
T d1ij5a_ 193 DFRKIDTNSNGTLSRKEFREHFVRLGFDKKSVQDALFRYADEDESDDVGFSEYVHLGLCLLVLRILYAFADFDKSGQLSK 272 (321)
T ss_dssp CHHHHCTTCCSEECHHHHHHHHHHTTCCCHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHHHHHHHHHTCSSSCSSEEH
T ss_pred HHHHHhhcccccchhHHHhhhhhcccccchHHHHHHHHhhhcccccccccccccchhhhhhHHHHHHHHHhcCCCCCCcH
Confidence 0 0 01123456899999999999999
Q ss_pred HHHHHHHHHcCCC-CCHHHHHHHHHHhcCCCCCcccHHHHHHHHHh
Q 042823 410 SELKAGLAKLGSA-LEESEVNQYMEAGDIDGNGNIDSIEFVNLMTD 454 (477)
Q Consensus 410 ~el~~~l~~~g~~-~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~ 454 (477)
.||+.+|..+|.+ +++.++..+++.+|.|+||.|+|+||+.+|.-
T Consensus 273 ~E~~~~l~~~~~~~~~~~~~~~l~~~~D~d~dG~Is~~EF~~~ml~ 318 (321)
T d1ij5a_ 273 EEVQKVLEDAHIPESARKKFEHQFSVVDVDDSKSLSYQEFVMLVLL 318 (321)
T ss_dssp HHHHHHHHHTTCCGGGCSTHHHHHHHHTTTTCSEECHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCcCcHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence 9999999999974 88889999999999999999999999998863
|
| >d2fcea1 a.39.1.5 (A:84-144) Calmodulin {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.54 E-value=4.8e-15 Score=102.23 Aligned_cols=61 Identities=25% Similarity=0.585 Sum_probs=58.9
Q ss_pred HHHHHHhhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHH
Q 042823 390 QKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVN 450 (477)
Q Consensus 390 ~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~ 450 (477)
++++++|+.||++++|+|+.+||+.+|+.+|..+++.+++.+++.+|.+++|.|+|+||+.
T Consensus 1 Eel~~aF~~fD~~~~G~I~~~el~~~l~~~g~~~~~~ei~~l~~~~D~d~dg~I~~~eFl~ 61 (61)
T d2fcea1 1 EDFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNGEIDYKKFIE 61 (61)
T ss_dssp HHHHHHHHHHCTTCCSCEEHHHHHHHHHHTTCCCCHHHHHHHHTTCCCCTTSEECHHHHHH
T ss_pred ChHHHHHHHHCCCCCCeEeHHHHHHHHHHcCCCCCHHHHHHHHHHcCCCCCCcEeHHHhcC
Confidence 4789999999999999999999999999999999999999999999999999999999984
|
| >d1fi5a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]
Probab=99.54 E-value=6.3e-15 Score=108.04 Aligned_cols=66 Identities=30% Similarity=0.562 Sum_probs=63.2
Q ss_pred HHHHHHHhhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHh
Q 042823 389 KQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTD 454 (477)
Q Consensus 389 ~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~ 454 (477)
.++|+++|+.||.|++|+|+.+||+.+|+.+|.++++++++.+++.+|.|+||.|+|+||+.+|..
T Consensus 14 ee~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~ev~~~~~~~D~d~dg~I~~~EF~~~m~~ 79 (81)
T d1fi5a_ 14 EEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMKG 79 (81)
T ss_dssp HHHHHHHHHHHCSSCSSEECHHHHHHHHHTSSSCCCHHHHHHHHHHHCSSSSSSEEHHHHHHHHSC
T ss_pred HHHHHHHHHHHcCCCCCcccHHHHHHHHHhcCCCCCHHHHHHHHHHHCCCCCCcEeHHHHHHHHHh
Confidence 467999999999999999999999999999999999999999999999999999999999999864
|
| >d1tiza_ a.39.1.5 (A:) Calmodulin-related protein T21P5.17 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin-related protein T21P5.17 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.54 E-value=7.6e-15 Score=103.44 Aligned_cols=63 Identities=21% Similarity=0.466 Sum_probs=61.0
Q ss_pred HHHHhhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHh
Q 042823 392 LMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTD 454 (477)
Q Consensus 392 l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~ 454 (477)
++++|+.||.|++|+|+.+||+.+++.+|..+++++++.+++.+|.|++|.|+|+||+.+|.+
T Consensus 3 ~r~~F~~~D~d~~G~I~~~El~~~l~~lg~~~~~~~i~~~~~~~D~d~dg~I~~~EF~~~m~~ 65 (67)
T d1tiza_ 3 AKRVFEKFDKNKDGKLSLDEFREVALAFSPYFTQEDIVKFFEEIDVDGNGELNADEFTSCIEK 65 (67)
T ss_dssp HHHHHHHHCTTSSSCEEHHHHHHHHHHTCTTSCHHHHHHHHHHHCCSSSSEECHHHHHHHHHT
T ss_pred HHHHHHHHCCCCcCcCcHHHHHHHHHHhccccchHHHHHHHHHhCCCCCCeEeHHHHHHHHHH
Confidence 678999999999999999999999999999999999999999999999999999999999875
|
| >d1s6ja_ a.39.1.5 (A:) Calcium-dependent protein kinase sk5 CLD {Soybean (Glycine max) [TaxId: 3847]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium-dependent protein kinase sk5 CLD species: Soybean (Glycine max) [TaxId: 3847]
Probab=99.53 E-value=5.1e-16 Score=115.52 Aligned_cols=73 Identities=47% Similarity=0.681 Sum_probs=67.6
Q ss_pred HHhcCChHHHHHHHHHhhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHH
Q 042823 380 LCENLPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLM 452 (477)
Q Consensus 380 ~~~~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~ 452 (477)
++..++.+++..++++|+.||+|++|.|+.+||+.+|+.+|..+++++++++++.+|.+++|.|+|+||+++|
T Consensus 13 ma~~l~~~~i~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~s~~e~~~l~~~~D~d~~g~I~~~EFl~am 85 (87)
T d1s6ja_ 13 MAERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTIDYGEFIAAT 85 (87)
T ss_dssp SSSSSCSSSTTTTTTHHHHHCTTCSSCEEHHHHHHHHHTTTSSCCHHHHHHHHHHHCTTCSSEECHHHHTTCC
T ss_pred HHhhCCHHHHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHcCCCCCCeEeHHHHHHHH
Confidence 3456677777889999999999999999999999999999999999999999999999999999999999765
|
| >d1c7va_ a.39.1.5 (A:) Calcium vector protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium vector protein species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]
Probab=99.53 E-value=2.5e-15 Score=106.07 Aligned_cols=65 Identities=31% Similarity=0.598 Sum_probs=61.5
Q ss_pred HHHHHHhhhhcCCCCCCcCHHHHHHHHHHcCCC-CCHHHHHHHHHHhcCCCCCcccHHHHHHHHHh
Q 042823 390 QKLMEKFREMDTDNSDTLTLSELKAGLAKLGSA-LEESEVNQYMEAGDIDGNGNIDSIEFVNLMTD 454 (477)
Q Consensus 390 ~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~-~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~ 454 (477)
++++++|+.||++++|+|+.+||+.+|+.+|.. +++++++.+++.+|.|+||.|+|+||+.+|.+
T Consensus 2 eel~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~s~~e~~~~~~~~D~d~dG~i~~~EF~~~m~r 67 (68)
T d1c7va_ 2 EEILRAFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNGVIDIPEFMDLIKK 67 (68)
T ss_dssp HHHHHHHHHHSCSGGGEECHHHHHHHSSTTTTCCCCHHHHHHHHHHHCSSGGGSEEHHHHHHHHHC
T ss_pred HHHHHHHHHHcCCCcCeEcHHHHHHHHHHhCCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHh
Confidence 478999999999999999999999999999985 79999999999999999999999999999864
|
| >d2pvba_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Parvalbumin species: Pike (Esox lucius) [TaxId: 8010]
Probab=99.53 E-value=1.4e-14 Score=112.14 Aligned_cols=67 Identities=30% Similarity=0.477 Sum_probs=61.6
Q ss_pred HHHHHHHHHhhhhcCCCCCCcCHHHHHHHHHHcC---CCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHH
Q 042823 387 KEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLG---SALEESEVNQYMEAGDIDGNGNIDSIEFVNLMT 453 (477)
Q Consensus 387 ~~~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g---~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~ 453 (477)
...++++.+|+.||+|++|+|+.+||+.+++.++ ..+++++++.+++.+|.|+||.|+|+||+.+|.
T Consensus 37 ~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~l~~~~~~~~~~~~~~l~~~~D~d~dG~I~~~EF~~~m~ 106 (107)
T d2pvba_ 37 KSLDDVKKAFYVIDQDKSGFIEEDELKLFLQNFSPSARALTDAETKAFLADGDKDGDGMIGVDEFAAMIK 106 (107)
T ss_dssp SCHHHHHHHHHHHCTTCSSSBCHHHHHTGGGGTCTTSCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHH
T ss_pred CCHHHHHHHHHhhccCCCCcCcHHHHHHHHHHhhcccccCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHc
Confidence 3456899999999999999999999999999984 578999999999999999999999999999885
|
| >d1nyaa_ a.39.1.5 (A:) Calerythrin {Saccharopolyspora erythraea [TaxId: 1836]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calerythrin species: Saccharopolyspora erythraea [TaxId: 1836]
Probab=99.52 E-value=4.3e-14 Score=120.72 Aligned_cols=131 Identities=21% Similarity=0.271 Sum_probs=99.1
Q ss_pred hhHHHHHHhhhcCCCCCCCccHHHHHHHHHhh----CCCCCHHHHHHHHHHh-----------hcc----chHHHHHh--
Q 042823 324 ETQALKEKFIEMDTDKNGTLSYDELRAGLTKV----GSMLTEFDVKHLMEAV-----------KNS----STLESLCE-- 382 (477)
Q Consensus 324 ~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~----~~~~~~~~~~~~~~~~-----------d~~----~~~~~~~~-- 382 (477)
...+++++|..+|.|++|.|+.+||..++.++ +..+...++..+.... +.+ ..+..+..
T Consensus 5 ~~~~l~~~F~~~D~d~dG~Is~~Ef~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 84 (176)
T d1nyaa_ 5 ASDRLKKRFDRWDFDGNGALERADFEKEAQHIAEAFGKDAGAAEVQTLKNAFGGLFDYLAKEAGVGSDGSLTEEQFIRVT 84 (176)
T ss_dssp HHHHHHHHHHHCCSSCCSSBCSHHHHHHHHHHHHHTSSCSSSHHHHHHHHHHHHHHHHHHHHHTSCTTCCBCHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHHHHHcCCcccHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccHHHHHHHH
Confidence 45678999999999999999999999998876 3445444444433222 111 11222211
Q ss_pred -----cCC-----hHHHHHHHHHhhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHH
Q 042823 383 -----NLP-----TKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLM 452 (477)
Q Consensus 383 -----~~~-----~~~~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~ 452 (477)
... ......++.+|..||.|++|.|+.+||+.+++.+| +++++++.++..+|.|+||.|+|+||+.++
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~E~~~~~~~~~--~~~~~~~~~f~~~D~d~dG~i~~~Ef~~~~ 162 (176)
T d1nyaa_ 85 ENLIFEQGEASFNRVLGPVVKGIVGMCDKNADGQINADEFAAWLTALG--MSKAEAAEAFNQVDTNGNGELSLDELLTAV 162 (176)
T ss_dssp HHHHSSSCHHHHHHHHHHHHHHHHHHTCSSCCSEEEHHHHHHHHHHTT--CCHHHHHHHHHHHCTTCSSEEEHHHHHHHH
T ss_pred hhhhhhhhhhhhHHHHHHHHHHHHHHHccCCChhhhHHHHHHHHHhcC--CcHHHHHHHHHHHCCCCCCcEeHHHHHHHH
Confidence 111 12345688999999999999999999999999887 578999999999999999999999999998
Q ss_pred Hhhh
Q 042823 453 TDIY 456 (477)
Q Consensus 453 ~~~~ 456 (477)
...+
T Consensus 163 ~~~~ 166 (176)
T d1nyaa_ 163 RDFH 166 (176)
T ss_dssp SCCS
T ss_pred HHHh
Confidence 7654
|
| >d2mysc_ a.39.1.5 (C:) Myosin Regulatory Chain {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Myosin Regulatory Chain species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=99.52 E-value=1e-14 Score=120.67 Aligned_cols=89 Identities=18% Similarity=0.241 Sum_probs=79.0
Q ss_pred HHHHHHHhhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCC--CCCcccHHHHHHHHHhhhC---CCcHHH
Q 042823 389 KQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDID--GNGNIDSIEFVNLMTDIYK---LETPEL 463 (477)
Q Consensus 389 ~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~--~~g~i~~~eF~~~~~~~~~---~~~~~~ 463 (477)
.++++++|+.||.|++|.|+.+||..+|+.+|.+++..++..++..++.+ ++|.|+|+||+.++..... ....++
T Consensus 3 ~eelke~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~e~~~~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~ 82 (145)
T d2mysc_ 3 ADDFKEAFLLFDRTGDAKITASQVGDIARALGQNPTNAEINKILGNPSKEEMNAAAITFEEFLPMLQAAANNKDQGTFED 82 (145)
T ss_pred HHHHHHHHHHHcCCCCCeECHHHHHHHHHHhhhcchhhhhHHHHHHHhhcccccCccchhHHHHHHhhhhhccccchHHH
Confidence 46899999999999999999999999999999999999999999987655 6889999999999875433 345678
Q ss_pred HHHHHHHhccCCCC
Q 042823 464 LEKAFQYLDKNSDQ 477 (477)
Q Consensus 464 l~~aF~~~D~d~~G 477 (477)
++.||+.||+|++|
T Consensus 83 l~~aF~~~D~d~~G 96 (145)
T d2mysc_ 83 FVEGLRVFDKEGNG 96 (145)
T ss_pred HHHHHHHhhcCCCC
Confidence 99999999999998
|
| >d1fpwa_ a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Frequenin (neuronal calcium sensor 1) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.52 E-value=1.8e-14 Score=124.79 Aligned_cols=147 Identities=18% Similarity=0.175 Sum_probs=113.4
Q ss_pred cCCchhhHHHHHHhhhcCCCCCCCccHHHHHHHHHhhCCCCCH-HHHHHHHHHhhccc----hHHHHHhcC----ChHHH
Q 042823 319 YLPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTE-FDVKHLMEAVKNSS----TLESLCENL----PTKEK 389 (477)
Q Consensus 319 ~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~-~~~~~~~~~~d~~~----~~~~~~~~~----~~~~~ 389 (477)
.++..++..+.+.|. +.+++|.++..|+..++..++...+. ..++++++.+|.+. ++.+|+..+ .....
T Consensus 21 ~fs~~Ei~~l~~~F~--~~~~~G~i~~~ef~~~~~~~~~~~~~~~~~~~if~~~D~~~~G~I~~~Ef~~~~~~~~~~~~~ 98 (190)
T d1fpwa_ 21 YFDRREIQQWHKGFL--RDCPSGQLAREDFVKIYKQFFPFGSPEDFANHLFTVFDKDNNGFIHFEEFITVLSTTSRGTLE 98 (190)
T ss_dssp CSTHHHHHHHHHHHH--HHCTTCCEEHHHHHHHHHHHCTTSCCSHHHHHHHHTCCSSCSSEECHHHHHHHHHHHSCCCST
T ss_pred CCCHHHHHHHHHHHH--HHCCCCCccHHHHHHHHHHHCCCCChHHHHHHHHHHhCcCCCCcccHHHHHHHHHHHccCchH
Confidence 456777777777774 45578999999999999998765544 45688999987543 466654432 22335
Q ss_pred HHHHHHhhhhcCCCCCCcCHHHHHHHHHHcCC------------CCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhhhC
Q 042823 390 QKLMEKFREMDTDNSDTLTLSELKAGLAKLGS------------ALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIYK 457 (477)
Q Consensus 390 ~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~------------~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~~~ 457 (477)
++++.+|+.||.|++|.|+.+|+..+++.++. ...+..++++++.+|.|+||.|+|+||..++....
T Consensus 99 e~~~~~F~~~D~d~dG~is~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~if~~~D~d~dG~Is~~EF~~~~~~~p- 177 (190)
T d1fpwa_ 99 EKLSWAFELYDLNHDGYITFDEMLTIVASVYKMMGSMVTLNEDEATPEMRVKKIFKLMDKNEDGYITLDEFREGSKVDP- 177 (190)
T ss_dssp HHHHHHHHHHCSSCSSEEEHHHHHHHHHHHHTTSCSTTSSSCCCCCHHHHHHHHHHHHTTTCSSEEEHHHHHHHHHSST-
T ss_pred HHHHHHHHHhccCCCCcCcHHHHHHHHHHHHHhcccccCCCchhhhHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHCH-
Confidence 68899999999999999999999999977532 12246789999999999999999999999887532
Q ss_pred CCcHHHHHHHHHHhcc
Q 042823 458 LETPELLEKAFQYLDK 473 (477)
Q Consensus 458 ~~~~~~l~~aF~~~D~ 473 (477)
.+.++|.+||.
T Consensus 178 -----~i~~~l~~~d~ 188 (190)
T d1fpwa_ 178 -----SIIGALNLYDG 188 (190)
T ss_dssp -----THHHHHHHHHC
T ss_pred -----HHHHHhhhhcc
Confidence 57889998874
|
| >d1rroa_ a.39.1.4 (A:) Oncomodulin {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Oncomodulin species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.51 E-value=1.1e-14 Score=112.95 Aligned_cols=98 Identities=28% Similarity=0.419 Sum_probs=77.4
Q ss_pred CCCCCHHHHHHHHHHhhccc--hHHHHHh--cCChHHHHHHHHHhhhhcCCCCCCcCHHHHHHHHHHc---CCCCCHHHH
Q 042823 356 GSMLTEFDVKHLMEAVKNSS--TLESLCE--NLPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKL---GSALEESEV 428 (477)
Q Consensus 356 ~~~~~~~~~~~~~~~~d~~~--~~~~~~~--~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~---g~~~~~~~i 428 (477)
+-.++.+++...++.++..+ ++.+|.. .++....++++++|+.||.|++|+|+.+||+.+|+.+ |..++++++
T Consensus 3 ~d~ls~~dI~~~l~~~~~~~s~~~~~F~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~l~~~~~~l~~~~~ 82 (108)
T d1rroa_ 3 TDILSAEDIAAALQECQDPDTFEPQKFFQTSGLSKMSASQVKDIFRFIDNDQSGYLDGDELKYFLQKFQSDARELTESET 82 (108)
T ss_dssp GGTSCHHHHHHHHHHTCSTTCCCHHHHHHHHSGGGSCHHHHHHHHHHHCTTCSSEECTHHHHTGGGGTCTTSCCCCHHHH
T ss_pred hhhCCHHHHHHHHHhcccCCCccHHHHHHHHccCcCCHHHHHHHHhhhcCCCCCeEcHHHHHHHHHHHHhccCCCCHHHH
Confidence 33456666666666665332 3444433 2344456789999999999999999999999999887 567899999
Q ss_pred HHHHHHhcCCCCCcccHHHHHHHHH
Q 042823 429 NQYMEAGDIDGNGNIDSIEFVNLMT 453 (477)
Q Consensus 429 ~~~~~~~d~~~~g~i~~~eF~~~~~ 453 (477)
+.+++.+|.|+||.|+|+||+.+|.
T Consensus 83 ~~~~~~~D~d~dG~I~~~EF~~~m~ 107 (108)
T d1rroa_ 83 KSLMDAADNDGDGKIGADEFQEMVH 107 (108)
T ss_dssp HHHHHHHCCSSSSSEEHHHHHHHHT
T ss_pred HHHHHHhCCCCCCeEeHHHHHHHHc
Confidence 9999999999999999999999874
|
| >d2scpa_ a.39.1.5 (A:) Sarcoplasmic calcium-binding protein {Sandworm (Nereis diversicolor) [TaxId: 126592]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Sarcoplasmic calcium-binding protein species: Sandworm (Nereis diversicolor) [TaxId: 126592]
Probab=99.51 E-value=4.2e-14 Score=120.71 Aligned_cols=132 Identities=17% Similarity=0.228 Sum_probs=97.1
Q ss_pred hhhHHHHHHhhhcCCCCCCCccHHHHHHHHHhhCC----CCCHH-HH----HHHHHHh----hc--cchHHHHHhcC---
Q 042823 323 EETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGS----MLTEF-DV----KHLMEAV----KN--SSTLESLCENL--- 384 (477)
Q Consensus 323 ~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~----~~~~~-~~----~~~~~~~----d~--~~~~~~~~~~~--- 384 (477)
....+++.+|..+|.|++|.|+.+||..++.+++. ..... .. ....... ++ ..++.+++..+
T Consensus 3 ~~~~~l~~~F~~~D~d~dG~Is~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ef~~~~~~~ 82 (174)
T d2scpa_ 3 LWVQKMKTYFNRIDFDKDGAITRMDFESMAERFAKESEMKAEHAKVLMDSLTGVWDNFLTAVAGGKGIDETTFINSMKEM 82 (174)
T ss_dssp HHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHHHHSCCCTTHHHHHHHHHHHHHHHTGGGTTTTSCEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccCCCCcEeHHHHHHHHHHHhccccchhHHHHHhHHhhhhhccccccccCCCCcCcHHHHHHHHHhh
Confidence 45678999999999999999999999999887631 11111 11 1111211 11 12344443322
Q ss_pred ------ChHHHHHHHHHhhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhhh
Q 042823 385 ------PTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIY 456 (477)
Q Consensus 385 ------~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~~ 456 (477)
.......+..+|+.+|.|++|.|+.+||+.+++.+|. +++++..+++.+|.|+||.|+++||+.++...+
T Consensus 83 ~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~E~~~~l~~~~~--~~~~~~~~f~~~D~d~dG~Is~~Ef~~~~~~f~ 158 (174)
T d2scpa_ 83 VKNPEAKSVVEGPLPLFFRAVDTNEDNNISRDEYGIFFGMLGL--DKTMAPASFDAIDTNNDGLLSLEEFVIAGSDFF 158 (174)
T ss_dssp TSCGGGTHHHHTHHHHHHHHHCTTCSSSEEHHHHHHHHHHTTC--CGGGHHHHHHHHCTTCSSEECHHHHHHHHHHHH
T ss_pred hcchhhHHHHHHHHHHHHHHHCCCccccCCHHHHHHHHHHHhh--hhHHHHHHHhhcCCCCCCcEeHHHHHHHHHHHh
Confidence 2233456889999999999999999999999998874 567899999999999999999999999887643
|
| >d2zfda1 a.39.1.5 (A:32-214) Calcineurin B-like protein 2 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcineurin B-like protein 2 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.51 E-value=1.1e-13 Score=119.16 Aligned_cols=137 Identities=18% Similarity=0.266 Sum_probs=111.0
Q ss_pred hccCCchhhHHHHHHhhhcCCC--CCCCccHHHHHHHHHhhCCCCCHHHHHHHHHHhhcc----chHHHHHhc---CC--
Q 042823 317 VEYLPDEETQALKEKFIEMDTD--KNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNS----STLESLCEN---LP-- 385 (477)
Q Consensus 317 ~~~~~~~~~~~l~~~F~~~D~~--~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~----~~~~~~~~~---~~-- 385 (477)
...++.+++..+.+.|..+|.+ ++|.|+.+||..++...+..++. .++.+++.+|.+ .++.+|+.. +.
T Consensus 8 ~t~Fs~~ei~~L~~~F~~~d~~~~~~G~i~~~ef~~~l~~~~~~~~~-~~~~lf~~~d~~~dg~I~f~EFl~~l~~~~~~ 86 (183)
T d2zfda1 8 DTVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESL-FADRVFDLFDTKHNGILGFEEFARALSVFHPN 86 (183)
T ss_dssp HSSCCHHHHHHHHHHHHHHHTSSSCSSSBCHHHHHHHHHSCSSCCCH-HHHHHHHHHCSSCSSSBCHHHHHHHHHHTSTT
T ss_pred hCCCCHHHHHHHHHHHHHHCcCCCCCCcCcHHHHHHHHHhcCCCCCH-HHHHHHHHHccCCCCcCcHHHHHHHHHhhhcc
Confidence 4667889999999999998875 69999999999999888776654 578899998754 346666543 22
Q ss_pred hHHHHHHHHHhhhhcCCCCCCcCHHHHHHHHHH----cCCCCCHHHH----HHHHHHhcCCCCCcccHHHHHHHHHh
Q 042823 386 TKEKQKLMEKFREMDTDNSDTLTLSELKAGLAK----LGSALEESEV----NQYMEAGDIDGNGNIDSIEFVNLMTD 454 (477)
Q Consensus 386 ~~~~~~l~~~F~~~D~~~~G~I~~~el~~~l~~----~g~~~~~~~i----~~~~~~~d~~~~g~i~~~eF~~~~~~ 454 (477)
....+.++.+|+.+|.|++|.|+.+|++.++.. .|..+++.++ +.+++.+|.|+||.|+|+||..++..
T Consensus 87 ~~~~~~~~~~F~~~D~d~~G~Is~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~if~~~D~d~dG~Is~~EF~~~~~~ 163 (183)
T d2zfda1 87 APIDDKIHFSFQLYDLKQQGFIERQEVKQMVVATLAESGMNLKDTVIEDIIDKTFEEADTKHDGKIDKEEWRSLVLR 163 (183)
T ss_dssp SCHHHHHHHHHHHHCTTSSSSEEHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHCSSCSSEECHHHHHHHHHH
T ss_pred CcHHHHHHHhhcccccCCCCCccHHHHHHHHHHHHhhhhcccchHHHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHH
Confidence 234567999999999999999999999997754 4777777664 55678899999999999999999875
|
| >d1rwya_ a.39.1.4 (A:) Parvalbumin {Rat (Rattus rattus) [TaxId: 10117]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Parvalbumin species: Rat (Rattus rattus) [TaxId: 10117]
Probab=99.50 E-value=1.6e-14 Score=112.43 Aligned_cols=66 Identities=30% Similarity=0.465 Sum_probs=61.0
Q ss_pred HHHHHHHhhhhcCCCCCCcCHHHHHHHHHHcC---CCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHh
Q 042823 389 KQKLMEKFREMDTDNSDTLTLSELKAGLAKLG---SALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTD 454 (477)
Q Consensus 389 ~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g---~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~ 454 (477)
.+.++.+|+.||+|++|+|+.+||+.+|+.++ ..+++++++.+++.+|.|+||.|+|+||+++|.+
T Consensus 40 ~~~~~~~F~~~D~d~~G~I~~~El~~~l~~l~~~~~~~~~~e~~~~~~~~D~d~dG~i~~~EF~~~m~~ 108 (109)
T d1rwya_ 40 ADDVKKVFHILDKDKSGFIEEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGDGKIGVEEFSTLVAE 108 (109)
T ss_dssp HHHHHHHHHHHSTTCSSEECHHHHHTHHHHHCTTCCCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHT
T ss_pred HHHHHHHhhcccCCCCCcCcHHHHHHHHHHhccccccCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHh
Confidence 46788999999999999999999999999875 4689999999999999999999999999999864
|
| >d2sasa_ a.39.1.5 (A:) Sarcoplasmic calcium-binding protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Sarcoplasmic calcium-binding protein species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]
Probab=99.50 E-value=1.4e-14 Score=124.97 Aligned_cols=135 Identities=19% Similarity=0.244 Sum_probs=100.1
Q ss_pred CCchhhHHHHHHhhh-cCCCCCCCccHHHHHHHHHhhCC----CCCHHHHH-----------HHHHHhhcc----chHHH
Q 042823 320 LPDEETQALKEKFIE-MDTDKNGTLSYDELRAGLTKVGS----MLTEFDVK-----------HLMEAVKNS----STLES 379 (477)
Q Consensus 320 ~~~~~~~~l~~~F~~-~D~~~~G~i~~~el~~~l~~~~~----~~~~~~~~-----------~~~~~~d~~----~~~~~ 379 (477)
+++.+...++.+|.. +|.|++|.|+.+||..++.+++. ........ .+....+.+ .++.+
T Consensus 2 lt~~q~~~i~~~F~~~~D~d~dG~Is~~Ef~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~i~~~~ 81 (185)
T d2sasa_ 2 LNDFQKQKIKFTFDFFLDMNHDGSIQDNDFEDMMTRYKEVNKGSLSDADYKSMQASLEDEWRDLKGRADINKDDVVSWEE 81 (185)
T ss_dssp CCHHHHHHHHHHHHHHTCTTCSSEECHHHHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHHHCTTCSSCEEHHH
T ss_pred cCHHHHHHHHHHHHHhhcCCCCCcCCHHHHHHHHHHhccccCCCcccHHHHHHHHHHHHHHHHHHHHhCcCCCCcEeeeH
Confidence 456677889999997 59999999999999999887632 22222221 122223322 12333
Q ss_pred HHhc-------------CChHHHHHHHHHhhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHH
Q 042823 380 LCEN-------------LPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSI 446 (477)
Q Consensus 380 ~~~~-------------~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~ 446 (477)
+... +.......+..+|+.+|.|++|+|+.+||+.+++.+| +++++++.++..+|.|++|.|+|+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~E~~~~l~~~~--l~~~~~~~~f~~~D~d~dG~i~~~ 159 (185)
T d2sasa_ 82 YLAMWEKTIATCKSVADLPAWCQNRIPFLFKGMDVSGDGIVDLEEFQNYCKNFQ--LQCADVPAVYNVITDGGKVTFDLN 159 (185)
T ss_dssp HHHHHHHHHHTCCSGGGSCTTHHHHHHHHHHHHCTTSSSCCCHHHHHHHTTSSC--CCCSSHHHHHHHHHTTTTSCCSHH
T ss_pred hhHHHHHHhhhhhhhhhhhHHHHHHHHHHHHHHccCCCccCCHHHHHHHHHHcC--CCHHHHHHHHHHcCCCCCCCCcHH
Confidence 2221 2233456788999999999999999999999999877 567789999999999999999999
Q ss_pred HHHHHHHhhh
Q 042823 447 EFVNLMTDIY 456 (477)
Q Consensus 447 eF~~~~~~~~ 456 (477)
||..++...+
T Consensus 160 EF~~~~~~f~ 169 (185)
T d2sasa_ 160 RYKELYYRLL 169 (185)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 9999887644
|
| >d1bjfa_ a.39.1.5 (A:) Neurocalcin {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Neurocalcin species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.49 E-value=5e-14 Score=121.06 Aligned_cols=136 Identities=16% Similarity=0.181 Sum_probs=109.0
Q ss_pred ccCCchhhHHHHHHhhhcCCCCCCCccHHHHHHHHHhhCCCCC-HHHHHHHHHHhhccc----hHHHHHhcC----ChHH
Q 042823 318 EYLPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLT-EFDVKHLMEAVKNSS----TLESLCENL----PTKE 388 (477)
Q Consensus 318 ~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~-~~~~~~~~~~~d~~~----~~~~~~~~~----~~~~ 388 (477)
..++.+++..+...|.. .+++|.++.+|+..++..++.... ...+++++..++.+. ++.+|+..+ ....
T Consensus 16 t~fs~~ei~~l~~~F~~--~~~~g~i~~~ef~~~l~~~~~~~~~~~~~~~lf~~~d~~~~g~i~~~eFl~~~~~~~~~~~ 93 (181)
T d1bjfa_ 16 TDFTEHEIQEWYKGFLR--DCPSGHLSMEEFKKIYGNFFPYGDASKFAEHVFRTFDANGDGTIDFREFIIALSVTSRGKL 93 (181)
T ss_dssp SSCCHHHHHHHHHHHHH--HSTTSEEEHHHHHHHHTTTSSSSCCHHHHHHHHHHHCSSCSSEEEHHHHHHHHHHHTSSCH
T ss_pred cCCCHHHHHHHHHHHHh--hCCCCCcCHHHHHHHHHHhCCCCCHHHHHHHHHHhcCCCCCCcEeHHHHHHHHHHHhhhch
Confidence 34677777888877754 467899999999999999876554 566789999998543 466665433 2334
Q ss_pred HHHHHHHhhhhcCCCCCCcCHHHHHHHHHHcC------------CCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhh
Q 042823 389 KQKLMEKFREMDTDNSDTLTLSELKAGLAKLG------------SALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDI 455 (477)
Q Consensus 389 ~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g------------~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~ 455 (477)
.+.++.+|+.+|.|++|+|+.+|+..++..+. ...+++.++.+++.+|.|+||.|+|+||+.++.+.
T Consensus 94 ~~~~~~~f~~~D~d~dg~i~~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~if~~~D~d~dG~Is~~EF~~~~~~~ 172 (181)
T d1bjfa_ 94 EQKLKWAFSMYDLDGNGYISKAEMLEIVQAIYKMVSSVMKMPEDESTPEKRTEKIFRQMDTNRDGKLSLEEFIRGAKSD 172 (181)
T ss_dssp HHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHTTCCCTTTSCGGGSSHHHHHHHHHHHSCTTCSSEECHHHHHHHHHHC
T ss_pred HHHHHHHHHHhccCCCCeecHHHHHHHHHHHhhhccccccCCcccccHHHHHHHHHHHhCCCCCCcEeHHHHHHHHHhC
Confidence 67899999999999999999999999998752 24567789999999999999999999999998753
|
| >d1lkja_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.49 E-value=6.8e-14 Score=115.68 Aligned_cols=96 Identities=35% Similarity=0.512 Sum_probs=88.4
Q ss_pred hcCChHHHHHHHHHhhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhhhC-CCc
Q 042823 382 ENLPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIYK-LET 460 (477)
Q Consensus 382 ~~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~~~-~~~ 460 (477)
..|+++++++++++|+.||.|++|+|+.+||+.++...|..+++.++..++...+.++++.++|++|...+..... ..+
T Consensus 2 ~~ls~~~i~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (146)
T d1lkja_ 2 SNLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLALMSRQLKSNDS 81 (146)
T ss_dssp CCCCHHHHHHHHHHHHHHCCSSSSEEEHHHHHHHHHHHTCCCCHHHHHHHHHHHCSSSCCEEEHHHHHHHHHHHTCCCCH
T ss_pred CCCCHHHHHHHHHHHHHHCCCCCCcEeHHHHHHHHHhcCCCCCHHHHHHHHHHhccCCcccccHHHHHHHHHHhhccccH
Confidence 3578899999999999999999999999999999999999999999999999999999999999999998876555 445
Q ss_pred HHHHHHHHHHhccCCCC
Q 042823 461 PELLEKAFQYLDKNSDQ 477 (477)
Q Consensus 461 ~~~l~~aF~~~D~d~~G 477 (477)
.++++.||+.||+|++|
T Consensus 82 ~~~~~~aF~~~D~d~~G 98 (146)
T d1lkja_ 82 EQELLEAFKVFDKNGDG 98 (146)
T ss_dssp HHHHHHHHHHHCSSSSC
T ss_pred HHHHHHHHHHhCCCCCC
Confidence 67899999999999998
|
| >d1ggwa_ a.39.1.5 (A:) Cdc4p {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Cdc4p species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Probab=99.47 E-value=2.2e-14 Score=117.65 Aligned_cols=84 Identities=17% Similarity=0.259 Sum_probs=74.2
Q ss_pred HHHHHHhhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhhhC---CCcHHHHHH
Q 042823 390 QKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIYK---LETPELLEK 466 (477)
Q Consensus 390 ~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~~~---~~~~~~l~~ 466 (477)
.+++++|+.||+|++|.|+.+||+.+|+.+|.+++++++..+ +.+++|.|+|++|+.++..... ....+++++
T Consensus 5 ~~fke~F~~~D~d~dG~I~~~el~~~l~~lg~~~t~~ei~~~----~~~~~~~i~~~eF~~~~~~~~~~~~~~~~~~l~~ 80 (140)
T d1ggwa_ 5 SPYKQAFSLFDRHGTGRIPKTSIGDLLRACGQNPTLAEITEI----ESTLPAEVDMEQFLQVLNRPNGFDMPGDPEEFVK 80 (140)
T ss_dssp TTTHHHHHHTCSSSSSEECHHHHHHHHHHTSCCCCHHHHHHH----HTTSCSSEEHHHHHHHHCTTSSSSSSCCHHHHHH
T ss_pred HHHHHHHHHHCCCCCCeECHHHHHHHHHHHHhhhHHHhhhhh----hccccccccchhhhhhhhhhhhcchhhHHHHHHH
Confidence 467999999999999999999999999999999999987654 5678899999999999975443 345678999
Q ss_pred HHHHhccCCCC
Q 042823 467 AFQYLDKNSDQ 477 (477)
Q Consensus 467 aF~~~D~d~~G 477 (477)
||+.||+|++|
T Consensus 81 aF~~~D~d~~G 91 (140)
T d1ggwa_ 81 GFQVFDKDATG 91 (140)
T ss_dssp HHHTTCSSCSS
T ss_pred HHHHHhccCCC
Confidence 99999999998
|
| >d1dtla_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=99.46 E-value=1e-13 Score=116.00 Aligned_cols=98 Identities=26% Similarity=0.383 Sum_probs=87.7
Q ss_pred HHhcCChHHHHHHHHHhhhhcCCC-CCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhhhC-
Q 042823 380 LCENLPTKEKQKLMEKFREMDTDN-SDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIYK- 457 (477)
Q Consensus 380 ~~~~~~~~~~~~l~~~F~~~D~~~-~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~~~- 457 (477)
.+..|+++++++++++|+.||.|+ +|.|+..||+.+|+.+|..+++.++..++..++.+++|.+++++|...+.....
T Consensus 4 ~~~~Lt~~~~~~l~~~F~~~D~d~~dG~I~~~e~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (156)
T d1dtla_ 4 AVEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKD 83 (156)
T ss_dssp GGGGSCHHHHHHHHHHHHHHTTTCGGGSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTSSSSBCHHHHHHHHHHHHC-
T ss_pred HHHHCCHHHHHHHHHHHHHHcCCCCCCeECHHHHHHHHHHcCCCCCHHHHHHHHHHhhccCCCccchhhhhhhhhhcccc
Confidence 456789999999999999999996 899999999999999999999999999999999999999999999987664332
Q ss_pred ---CCcHHHHHHHHHHhccCCCC
Q 042823 458 ---LETPELLEKAFQYLDKNSDQ 477 (477)
Q Consensus 458 ---~~~~~~l~~aF~~~D~d~~G 477 (477)
..++++++.||+.||+|++|
T Consensus 84 ~~~~~~~~~l~~~F~~~D~d~~G 106 (156)
T d1dtla_ 84 DSKGKSEEELSDLFRMFDKNADG 106 (156)
T ss_dssp ----CHHHHHHHHHHHHCTTCSS
T ss_pred cccccHHHHHHHHHHHhCcCCCC
Confidence 34567899999999999998
|
| >d1topa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=99.44 E-value=7.2e-14 Score=117.74 Aligned_cols=97 Identities=28% Similarity=0.393 Sum_probs=86.4
Q ss_pred HhcCChHHHHHHHHHhhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhhhC---
Q 042823 381 CENLPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIYK--- 457 (477)
Q Consensus 381 ~~~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~~~--- 457 (477)
...++++++.+++++|+.+|+|++|+|+.+||+.++..++..+++..+..++..+|.+++|.++|.||+..+.....
T Consensus 11 ~~~ls~~~i~el~~~F~~~D~d~~G~Is~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~e~~~~~~~~~~~~~ 90 (162)
T d1topa_ 11 RAFLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQMKEDA 90 (162)
T ss_dssp HHHSCHHHHHHHHHHHHTTTCSCSSEEEGGGHHHHHHHTTCCCCHHHHHHHHHHHCTTSCCEEEHHHHHHHHHHHHHHHH
T ss_pred HccCCHHHHHHHHHHHHHHcCCCCCeEcHHHHHHHHhccCCchhHHHHHhhhheeccCCCCCeeeehhhhhhhhhhhhhc
Confidence 34688899999999999999999999999999999999999999999999999999999999999999887754332
Q ss_pred -CCcHHHHHHHHHHhccCCCC
Q 042823 458 -LETPELLEKAFQYLDKNSDQ 477 (477)
Q Consensus 458 -~~~~~~l~~aF~~~D~d~~G 477 (477)
....++++.||+.||+|++|
T Consensus 91 ~~~~~~~~~~aF~~~D~d~~G 111 (162)
T d1topa_ 91 KGKSEEELANCFRIFDKNADG 111 (162)
T ss_dssp HHHHHHHHHHHHHHHCTTCSS
T ss_pred ccCcHHHHHHHHHHHCCCCCC
Confidence 23456788999999999998
|
| >d1omra_ a.39.1.5 (A:) Recoverin {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Recoverin species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.44 E-value=1.4e-13 Score=120.32 Aligned_cols=135 Identities=16% Similarity=0.188 Sum_probs=105.0
Q ss_pred ccCCchhhHHHHHHhhhcCCCCCCCccHHHHHHHHHhhCCCCC-HHHHHHHHHHhhccc----hHHHHHhcCC----hHH
Q 042823 318 EYLPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLT-EFDVKHLMEAVKNSS----TLESLCENLP----TKE 388 (477)
Q Consensus 318 ~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~-~~~~~~~~~~~d~~~----~~~~~~~~~~----~~~ 388 (477)
..++..++..+.+.|. +.+++|.|+.+||.+++..++.... ...++.+++.+|.++ ++.+|+..+. ...
T Consensus 20 t~f~~~ei~~l~~~F~--~~~~~G~is~~EF~~~l~~~~~~~~~~~~~~~if~~~D~~~~G~I~f~EF~~~~~~~~~~~~ 97 (201)
T d1omra_ 20 TKFTEEELSSWYQSFL--KECPSGRITRQEFQTIYSKFFPEADPKAYAQHVFRSFDANSDGTLDFKEYVIALHMTSAGKT 97 (201)
T ss_dssp CSSCHHHHHHHHHHHH--HHCTTSEEEHHHHHHHHHHHCTTSCCHHHHHHHHHTTTSCSSSEEEHHHHHHHHHHHHSSCG
T ss_pred CCCCHHHHHHHHHHHH--HHCcCCCccHHHHHHHHHHhcCCCCHHHHHHHHHHHhccCCCCeEeehhHHHHHHhhcccch
Confidence 3457777777877774 4567999999999999999976554 556688999998543 4676665432 223
Q ss_pred HHHHHHHhhhhcCCCCCCcCHHHHHHHHHHcCCCCC--------------HHHHHHHHHHhcCCCCCcccHHHHHHHHHh
Q 042823 389 KQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALE--------------ESEVNQYMEAGDIDGNGNIDSIEFVNLMTD 454 (477)
Q Consensus 389 ~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~~~--------------~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~ 454 (477)
.+.++.+|+.||.|++|.|+.+|+..+++.++...+ ++.++.+++.+|.|+||.|+|+||+.++..
T Consensus 98 ~~~l~~~F~~~D~d~~G~is~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~if~~~D~d~dG~Is~~EF~~~~~~ 177 (201)
T d1omra_ 98 NQKLEWAFSLYDVDGNGTISKNEVLEIVTAIFKMISPEDTKHLPEDENTPEKRAEKIWGFFGKKDDDKLTEKEFIEGTLA 177 (201)
T ss_dssp GGSHHHHHHHHCTTCSSSBCHHHHHHHHHHHHTTSCHHHHTTSCGGGSSHHHHHHHHHHHTTCCTTCCBCHHHHHHHHHH
T ss_pred HHHHHHHHHHHccCCCCccCHHHHHHHHHHHHhhcChhhhhhhhhhhccHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHH
Confidence 456899999999999999999999999887643322 345788999999999999999999998753
|
| >d1s6ca_ a.39.1.5 (A:) Kchip1, Kv4 potassium channel-interacting protein {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Kchip1, Kv4 potassium channel-interacting protein species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.44 E-value=3.3e-13 Score=115.51 Aligned_cols=147 Identities=14% Similarity=0.202 Sum_probs=109.4
Q ss_pred ccCCchhhHHHHHHhhhcCCCCCCCccHHHHHHHHHhhCCCC-CHHHHHHHHHHhhccc----hHHHHHhcCC----hHH
Q 042823 318 EYLPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSML-TEFDVKHLMEAVKNSS----TLESLCENLP----TKE 388 (477)
Q Consensus 318 ~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~-~~~~~~~~~~~~d~~~----~~~~~~~~~~----~~~ 388 (477)
..++..++..+.+.|.. .+++|.|+.+||.+++..++... +...++.+++.+|.++ ++.+|+..+. ...
T Consensus 8 t~ft~~ei~~l~~~F~~--~~~~G~is~~ef~~~l~~~~~~~~~~~~~~~lf~~~D~~~~g~I~~~EFl~~~~~~~~~~~ 85 (178)
T d1s6ca_ 8 TNFTKRELQVLYRGFKN--ECPSGVVNEETFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVKFEDFVTALSILLRGTV 85 (178)
T ss_dssp SSCCHHHHHHHHHHHHH--HCTTSEECHHHHHHHHHHHSTTSCCHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHHCCH
T ss_pred CCCCHHHHHHHHHHHHH--HCcCCCccHHHHHHHHHHhCCCCCHHHHHHHHHHHHCCCCCCcccHHHHHHHHHHHhccch
Confidence 44567777777777754 45689999999999999987655 4555688999997543 4666655442 123
Q ss_pred HHHHHHHhhhhcCCCCCCcCHHHHHHHHHHc----C--------CCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhhh
Q 042823 389 KQKLMEKFREMDTDNSDTLTLSELKAGLAKL----G--------SALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIY 456 (477)
Q Consensus 389 ~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~----g--------~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~~ 456 (477)
.+.++.+|+.||.|++|.|+.+|+..++..+ + ....+..++.+++.+|.|+||.|+|+||..++.+.
T Consensus 86 ~~~~~~~f~~~D~~~~g~i~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~if~~~D~d~DG~Is~~EF~~~i~~~- 164 (178)
T d1s6ca_ 86 HEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGIVTLDEFLESCQED- 164 (178)
T ss_dssp HHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHHHTC-----------CHHHHHHHHHHHCTTCSSEECHHHHHHHTTSC-
T ss_pred HHHHHHHHHhhccCCCCeecHHHHHHHHHHHHhhcccccccCCcHHHHHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHC-
Confidence 5678999999999999999999998876553 1 12235567899999999999999999999987642
Q ss_pred CCCcHHHHHHHHHHhc
Q 042823 457 KLETPELLEKAFQYLD 472 (477)
Q Consensus 457 ~~~~~~~l~~aF~~~D 472 (477)
.++.+++..|+
T Consensus 165 -----~~~~~~l~~~~ 175 (178)
T d1s6ca_ 165 -----DNIMRSLQLFQ 175 (178)
T ss_dssp -----CHHHHHHHHHH
T ss_pred -----HHHHHHhhhhc
Confidence 25666666664
|
| >d2obha1 a.39.1.5 (A:26-166) Calmodulin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.43 E-value=9.9e-14 Score=113.93 Aligned_cols=93 Identities=27% Similarity=0.466 Sum_probs=83.3
Q ss_pred ChHHHHHHHHHhhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhhhC-CCcHHH
Q 042823 385 PTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIYK-LETPEL 463 (477)
Q Consensus 385 ~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~~~-~~~~~~ 463 (477)
+++++++++++|..+|+|++|+|+.+||..+++..|..+++..+..++..+|.+++|.|+|.||+..+..... ....++
T Consensus 1 t~~~~~elk~~F~~~D~~~~G~Is~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~ 80 (141)
T d2obha1 1 TEEQKQEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNFGDFLTVMTQKMSEKDTKEE 80 (141)
T ss_dssp CHHHHHHHHHHHHTTCTTCCSEEEGGGHHHHHHHTTCCCCHHHHHHHHHHHTTTCCSEEEHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHcCCCCCeEeHHHHHHHHHhcCCchhHHHHHHHHHhhccCCCCeechHHHHHHHHHHHhhhccHHH
Confidence 3567889999999999999999999999999999999999999999999999999999999999998865433 334577
Q ss_pred HHHHHHHhccCCCC
Q 042823 464 LEKAFQYLDKNSDQ 477 (477)
Q Consensus 464 l~~aF~~~D~d~~G 477 (477)
++.||+.+|++++|
T Consensus 81 l~~~f~~~d~~~~G 94 (141)
T d2obha1 81 ILKAFKLFDDDETG 94 (141)
T ss_dssp HHHHHHHHCTTCSS
T ss_pred HHHHHHHhcccCCC
Confidence 99999999999987
|
| >d1xo5a_ a.39.1.5 (A:) Calcium- and integrin-binding protein, CIB {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium- and integrin-binding protein, CIB species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.43 E-value=4e-13 Score=114.86 Aligned_cols=109 Identities=23% Similarity=0.326 Sum_probs=85.2
Q ss_pred HHHhhhcCCC-CCCCccHHHHHHHHHhhCCCCCHHHHHHHHHHhhccchHHHHHhcCChHHHHHHHHHhhhhcCCCCCCc
Q 042823 329 KEKFIEMDTD-KNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNSSTLESLCENLPTKEKQKLMEKFREMDTDNSDTL 407 (477)
Q Consensus 329 ~~~F~~~D~~-~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~F~~~D~~~~G~I 407 (477)
..+|..+|.+ ++|.|+++|+..++..+.... ...++++.+|+.||.|++|+|
T Consensus 60 ~rif~~fd~~~~~g~I~f~EFv~~l~~~~~~~---------------------------~~~~kl~~~F~~~D~d~~G~I 112 (180)
T d1xo5a_ 60 ERICRVFSTSPAKDSLSFEDFLDLLSVFSDTA---------------------------TPDIKSHYAFRIFDFDDDGTL 112 (180)
T ss_dssp HHHHHHHCCSTTCCEECHHHHHHHHHHHSTTS---------------------------CHHHHHHHHHHHHCTTCSSSB
T ss_pred HHHHHhccCCCCCCcCcHHHHHHHHHHHhhcC---------------------------CHHHHHHHhhccccCCCCCee
Confidence 4578888887 689999999988776653211 123578899999999999999
Q ss_pred CHHHHHHHHHHc-----CCCCCHHH----HHHHHHHhcCCCCCcccHHHHHHHHHhhhCCCcHHHHHHHHHH
Q 042823 408 TLSELKAGLAKL-----GSALEESE----VNQYMEAGDIDGNGNIDSIEFVNLMTDIYKLETPELLEKAFQY 470 (477)
Q Consensus 408 ~~~el~~~l~~~-----g~~~~~~~----i~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~l~~aF~~ 470 (477)
+.+||..+++.+ +..+++++ ++.+++.+|.|+||.|+|+||..++.+.. ++..+|++
T Consensus 113 ~~~el~~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~~D~d~dG~Is~~EF~~~~~~~P------~~~~~f~i 178 (180)
T d1xo5a_ 113 NREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINLSEFQHVISRSP------DFASSFKI 178 (180)
T ss_dssp CHHHHHHHHHHHC------CCCCTTHHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHCH------HHHHHHHH
T ss_pred eHHHHHHHHHHHHhccccccccHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHhCH------HHHhhCee
Confidence 999999999886 44555544 45678899999999999999999997543 67778764
|
| >d1jfja_ a.39.1.5 (A:) EHCABP {Entamoeba (Entamoeba histolytica) [TaxId: 5759]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: EHCABP species: Entamoeba (Entamoeba histolytica) [TaxId: 5759]
Probab=99.42 E-value=1.5e-13 Score=111.66 Aligned_cols=85 Identities=25% Similarity=0.366 Sum_probs=75.6
Q ss_pred HHHhhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhhhCCC---cHHHHHHHHH
Q 042823 393 MEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIYKLE---TPELLEKAFQ 469 (477)
Q Consensus 393 ~~~F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~~---~~~~l~~aF~ 469 (477)
..+|+.+|.|++|.|+.+||..++..+|..+++++++.+++.+|.+++|.|+|+||+.++....... ....++.+|+
T Consensus 3 e~~F~~~D~d~dG~is~~E~~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~Ef~~~~~~~~~~~~~~~~~~~~~~F~ 82 (134)
T d1jfja_ 3 EALFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYGSIQGQDLSDDKIGLKVLYK 82 (134)
T ss_dssp HHHHHHHCTTCSSEEEHHHHHHHHHTTCCSSHHHHHHHHHHHHCSSCCSEEEHHHHHHHTTCSSCCSSHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCcCCCcHHHHHHHHHHcCCCCCHHHHHHHHHHhhhccccccccccccccccccccccccccccccccccc
Confidence 4689999999999999999999999999999999999999999999999999999999887544422 2367889999
Q ss_pred HhccCCCC
Q 042823 470 YLDKNSDQ 477 (477)
Q Consensus 470 ~~D~d~~G 477 (477)
.+|.|++|
T Consensus 83 ~~D~~~~g 90 (134)
T d1jfja_ 83 LMDVDGDG 90 (134)
T ss_dssp HHCCSSSS
T ss_pred ccccccCC
Confidence 99999987
|
| >d2mysb_ a.39.1.5 (B:) Myosin Essential Chain {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Myosin Essential Chain species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=99.42 E-value=1.4e-13 Score=113.65 Aligned_cols=90 Identities=19% Similarity=0.342 Sum_probs=75.3
Q ss_pred ChHHHHHHHHHhhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhhhC-CCcHHH
Q 042823 385 PTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIYK-LETPEL 463 (477)
Q Consensus 385 ~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~~~-~~~~~~ 463 (477)
+++++++++++|..||.+++|.|+.+||+.+|+.+|..++..++ +..++.+++|.|+|.+|+.++..... ....++
T Consensus 2 ~~~qi~el~e~F~~~D~~~~G~I~~~e~~~~l~~lg~~~~~~~~---~~~~~~~~~g~i~~~eF~~~~~~~~~~~~~~~~ 78 (145)
T d2mysb_ 2 DETEIEDFKEAFTVIDQNADGIIDKDDLRETFAAMGRLNVKNEE---LDAMIKEASGPINFTVFLTMFGEKLKGADPEDV 78 (145)
T ss_pred CHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhCCCcchHHH---HHHHHHhccCceeechhhhhhhhcccccchHHH
Confidence 56788999999999999999999999999999999976555433 44455677899999999998876544 445678
Q ss_pred HHHHHHHhccCCCC
Q 042823 464 LEKAFQYLDKNSDQ 477 (477)
Q Consensus 464 l~~aF~~~D~d~~G 477 (477)
++.||+.||++++|
T Consensus 79 l~~aF~~fD~~~~g 92 (145)
T d2mysb_ 79 IMGAFKVLDPDGKG 92 (145)
T ss_pred HHHHHHhhhhcccc
Confidence 99999999999987
|
| >d1s6ia_ a.39.1.5 (A:) Calcium-dependent protein kinase sk5 CLD {Soybean (Glycine max) [TaxId: 3847]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium-dependent protein kinase sk5 CLD species: Soybean (Glycine max) [TaxId: 3847]
Probab=99.41 E-value=4.4e-14 Score=121.39 Aligned_cols=96 Identities=46% Similarity=0.659 Sum_probs=87.2
Q ss_pred hcCChHHHHHHHHHhhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhhhCCCcH
Q 042823 382 ENLPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIYKLETP 461 (477)
Q Consensus 382 ~~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~ 461 (477)
..|+++++.+|+++|+.+|.|++|+|+.+||..+|+.+|..+++.+++.+++.+|.+++|.|+|++|+.++.........
T Consensus 2 ~~Lt~~ei~~l~~~F~~~D~d~dG~Is~~e~~~~l~~l~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~ 81 (182)
T d1s6ia_ 2 ERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTIDYGEFIAATVHLNKLERE 81 (182)
T ss_dssp CSSSCTTTCSHHHHHHTTSSSSSSCEEHHHHHHHHTTTTCCCCHHHHHHHHHHTCTTCSSEECHHHHHHHHTTSSSSCCC
T ss_pred CCCCHHHHHHHHHHHHHHcCCCcCCCCHHHHHHHHHHcCCccccccchhhhhhhhccccccchHHHHHHHHHhhcccccH
Confidence 35777888899999999999999999999999999999999999999999999999999999999999988766555555
Q ss_pred HHHHHHHHHhccCCCC
Q 042823 462 ELLEKAFQYLDKNSDQ 477 (477)
Q Consensus 462 ~~l~~aF~~~D~d~~G 477 (477)
+.++.||+.+|.+++|
T Consensus 82 e~l~~aF~~~D~d~~G 97 (182)
T d1s6ia_ 82 ENLVSAFSYFDKDGSG 97 (182)
T ss_dssp CSTHHHHHHTTTTCSS
T ss_pred HHHHHHHHHHhhcCCC
Confidence 6788999999999887
|
| >d1qx2a_ a.39.1.1 (A:) Calbindin D9K {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calbindin D9K domain: Calbindin D9K species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.39 E-value=1.5e-13 Score=99.31 Aligned_cols=67 Identities=24% Similarity=0.446 Sum_probs=59.1
Q ss_pred HHHHHHHhhhhcCC--CCCCcCHHHHHHHHHHcCCCCC--HHHHHHHHHHhcCCCCCcccHHHHHHHHHhh
Q 042823 389 KQKLMEKFREMDTD--NSDTLTLSELKAGLAKLGSALE--ESEVNQYMEAGDIDGNGNIDSIEFVNLMTDI 455 (477)
Q Consensus 389 ~~~l~~~F~~~D~~--~~G~I~~~el~~~l~~~g~~~~--~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~ 455 (477)
.++++.+|+.||.+ ++|+|+.+||+.+|+.+|.+++ +.+++++++.+|.|+||.|+|+||+.+|.+.
T Consensus 4 ~eel~~~F~~fd~~~~~~G~I~~~El~~~l~~lg~~~~~~~~ei~~~~~~~D~d~dG~I~f~EF~~~m~~~ 74 (76)
T d1qx2a_ 4 PEEIKGAFEVFAAKEGDPNQISKEELKLVMQTLGPSLLKGMSTLDEMIEEVDKNGDGEVSFEEFLVMMKKI 74 (76)
T ss_dssp HHHHHHHHHHHHTSSSCTTSEEHHHHHHHHHHHGGGSCTTSCSHHHHHHHHCTTCSSEECHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcccCCCCCEECHHHHHHHHHHhCCcCCCCHHHHHHHHHHhhcCCCCcCcHHHHHHHHHHH
Confidence 46799999999764 4799999999999999987765 4479999999999999999999999998764
|
| >d1w7jb1 a.39.1.5 (B:11-149) Myosin Essential Chain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Myosin Essential Chain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.37 E-value=5.1e-14 Score=115.41 Aligned_cols=87 Identities=18% Similarity=0.224 Sum_probs=74.6
Q ss_pred HHHHHhhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcC--CCCCcccHHHHHHHHHhhhC---CCcHHHHH
Q 042823 391 KLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDI--DGNGNIDSIEFVNLMTDIYK---LETPELLE 465 (477)
Q Consensus 391 ~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~--~~~g~i~~~eF~~~~~~~~~---~~~~~~l~ 465 (477)
+++++|+.||++++|.|+.+||+.+|+.+|..++++++..++..++. +++|.|+|.+|..++..... ....+++.
T Consensus 1 e~ke~F~~~D~d~~G~I~~~el~~~l~~lg~~~t~~e~~~~~~~~~~~~~~~~~i~~~ef~~~~~~~~~~~~~~~~~~l~ 80 (139)
T d1w7jb1 1 EFKEAFELFDRVGDGKILYSQCGDVMRALGQNPTNAEVLKVLGNPKSDELKSRRVDFETFLPMLQAVAKNRGQGTYEDYL 80 (139)
T ss_dssp CHHHHHHHHCCSSSSEEESTTHHHHHHHTTCCCCHHHHHHHTTCCCHHHHTTCEEEHHHHHHHHHHHCC--------CCH
T ss_pred CHHHHHHHHhCCCCCeECHHHHHHHHHHhccCCCHHHHHHHHHHHhcccccCCceeeeccchhhHhhhhhccccHHHHHH
Confidence 47899999999999999999999999999999999999999987764 57899999999999875443 23456799
Q ss_pred HHHHHhccCCCC
Q 042823 466 KAFQYLDKNSDQ 477 (477)
Q Consensus 466 ~aF~~~D~d~~G 477 (477)
.||+.||+|++|
T Consensus 81 ~aF~~~D~d~~G 92 (139)
T d1w7jb1 81 EGFRVFDKEGNG 92 (139)
T ss_dssp HHHHTTCTTSSS
T ss_pred HhhhhccCCCCC
Confidence 999999999998
|
| >d1auib_ a.39.1.5 (B:) Calcineurin regulatory subunit (B-chain) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcineurin regulatory subunit (B-chain) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.35 E-value=7.5e-13 Score=111.68 Aligned_cols=94 Identities=26% Similarity=0.436 Sum_probs=81.3
Q ss_pred HHhcCChHHHHHHHHHhhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhhhCC-
Q 042823 380 LCENLPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIYKL- 458 (477)
Q Consensus 380 ~~~~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~- 458 (477)
++..++.+++.+|+++|+.+|+|++|+|+.+||+.++...+.+ .++++++.+|.+++|.|+|+||+.++......
T Consensus 6 ~~t~ft~eei~~l~~~F~~~D~d~~G~I~~~E~~~~~~~~~~~----~~~~l~~~~d~~~~g~i~~~EFl~~~~~~~~~~ 81 (165)
T d1auib_ 6 MCSHFDADEIKRLGKRFKKLDLDNSGSLSVEEFMSLPELQQNP----LVQRVIDIFDTDGNGEVDFKEFIEGVSQFSVKG 81 (165)
T ss_dssp CCCSCCHHHHHHHHHHHHHHCTTCCSEECHHHHTTSHHHHTCT----THHHHHHHHCTTCSSSEEHHHHHHHHGGGCTTC
T ss_pred HcCCCCHHHHHHHHHHHHHHCCCCCCCCcHHHHHHhhhccCCH----HHHHHHHHHccccchhhhhhhhhhhccccccch
Confidence 5667899999999999999999999999999999877654433 46788999999999999999999999876543
Q ss_pred CcHHHHHHHHHHhccCCCC
Q 042823 459 ETPELLEKAFQYLDKNSDQ 477 (477)
Q Consensus 459 ~~~~~l~~aF~~~D~d~~G 477 (477)
...+.++.+|+.+|.|++|
T Consensus 82 ~~~~~~~~~f~~~d~d~~g 100 (165)
T d1auib_ 82 DKEQKLRFAFRIYDMDKDG 100 (165)
T ss_dssp CHHHHHHHHHHHHCTTCSS
T ss_pred hhHHHHHHHHHHhcccccc
Confidence 4457799999999999998
|
| >d1jbaa_ a.39.1.5 (A:) Guanylate cyclase activating protein 2, GCAP-2 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Guanylate cyclase activating protein 2, GCAP-2 species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.35 E-value=1.6e-12 Score=112.17 Aligned_cols=93 Identities=20% Similarity=0.273 Sum_probs=83.6
Q ss_pred ChHHHHHHHHHhhhhcCC-CCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhhhCCCcHHH
Q 042823 385 PTKEKQKLMEKFREMDTD-NSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIYKLETPEL 463 (477)
Q Consensus 385 ~~~~~~~l~~~F~~~D~~-~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~ 463 (477)
+.....++++.|+.|+++ .+|+|+.+||+.+|...|...+...++.+++.+|.|++|.|+|.||+..+........++.
T Consensus 16 ~~~~~~ei~~~~~~F~~~~~~G~i~~~Ef~~~l~~~~~~~~~~~~~~lf~~~D~d~dG~I~f~Ef~~~l~~~~~~~~~~~ 95 (189)
T d1jbaa_ 16 GAADAAQLQEWYKKFLEECPSGTLFMHEFKRFFKVPDNEEATQYVEAMFRAFDTNGDNTIDFLEYVAALNLVLRGTLEHK 95 (189)
T ss_dssp CHHHHHHHHHHHHHHHSSSTTCCEEHHHHHHHHHCCSSSTTHHHHHHHHHHHCCSSSSEECHHHHHHHHHHHSSCCCTHH
T ss_pred CccCHHHHHHHHHHhcccCCCCeeeHHHHHHHHHHcCCCccHHHHHHHHHHhccCCCCeEeehhHHHHHHhhcccchHHH
Confidence 445567888888888776 4999999999999999999999999999999999999999999999999987766667788
Q ss_pred HHHHHHHhccCCCC
Q 042823 464 LEKAFQYLDKNSDQ 477 (477)
Q Consensus 464 l~~aF~~~D~d~~G 477 (477)
++.+|++||.|++|
T Consensus 96 ~~~~F~~~D~d~~g 109 (189)
T d1jbaa_ 96 LKWTFKIYDKDRNG 109 (189)
T ss_dssp HHHHHHHHCSSCSS
T ss_pred HHHHHhhhccCCCC
Confidence 99999999999998
|
| >d1wlza1 a.39.1.7 (A:229-311) DJ-1-binding protein, DJBP {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: EF-hand modules in multidomain proteins domain: DJ-1-binding protein, DJBP species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.33 E-value=1.4e-12 Score=96.04 Aligned_cols=64 Identities=14% Similarity=0.316 Sum_probs=61.3
Q ss_pred HHHHHHHhhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHH
Q 042823 389 KQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLM 452 (477)
Q Consensus 389 ~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~ 452 (477)
...++++|+.||.+++|.|+.+||+.+|+.+|..+++++++.+++.+|.+++|.|+|.||+..+
T Consensus 19 ~~~l~~~F~~~D~~~~G~i~~~ef~~~l~~~~~~l~~~e~~~l~~~~d~~~~g~I~y~eFl~~f 82 (83)
T d1wlza1 19 YHAITQEFENFDTMKTNTISREEFRAICNRRVQILTDEQFDRLWNEMPVNAKGRLKYPDFLSRF 82 (83)
T ss_dssp HHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHTCCCCHHHHHHHHTTSCBCTTSCBCHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCceEChhHHHHHHHHhCCCCChhHHHHHhhccccCCCCcEeHHHHHHHh
Confidence 4678999999999999999999999999999999999999999999999999999999999865
|
| >d1m45a_ a.39.1.5 (A:) Myosin Light Chain Mlc1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Myosin Light Chain Mlc1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.32 E-value=4.9e-13 Score=110.41 Aligned_cols=86 Identities=19% Similarity=0.203 Sum_probs=73.0
Q ss_pred HHHHhhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHH-hcCCCCCcccHHHHHHHHHhhh------CCCcHHHH
Q 042823 392 LMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEA-GDIDGNGNIDSIEFVNLMTDIY------KLETPELL 464 (477)
Q Consensus 392 l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~-~d~~~~g~i~~~eF~~~~~~~~------~~~~~~~l 464 (477)
++++|..||.|++|+|+.+||..+|+++|..+++++++.++.. .+.+.+|.|+|++|..++.... .....+++
T Consensus 4 ~k~~F~~~D~d~~G~I~~~el~~~l~~lg~~~s~~ei~~l~~~~~~~~~~~~i~~~ef~~~~~~~~~~~~~~~~~~~~~l 83 (146)
T d1m45a_ 4 NKDIFTLFDKKGQGAIAKDSLGDYLRAIGYNPTNQLVQDIINADSSLRDASSLTLDQITGLIEVNEKELDATTKAKTEDF 83 (146)
T ss_dssp CTTCHHHHCTTCCSEEEGGGHHHHHHHTTCCCCHHHHHHHHHC--CC--CCEEEHHHHHHHHHHTHHHHHGGGCCCTHHH
T ss_pred HHHHHHHHcCCCcCCCCHHHHHHHHHHcCCchhHHHHhhhhccccccccccccccchhhhhhhhhcccccccccchHHHH
Confidence 5789999999999999999999999999999999999999974 4556779999999999885321 13455789
Q ss_pred HHHHHHhccCCCC
Q 042823 465 EKAFQYLDKNSDQ 477 (477)
Q Consensus 465 ~~aF~~~D~d~~G 477 (477)
..||+.||++++|
T Consensus 84 ~~~F~~~D~~~~G 96 (146)
T d1m45a_ 84 VKAFQVFDKESTG 96 (146)
T ss_dssp HHHHHTTCSSSSS
T ss_pred HHHHHhhcccccc
Confidence 9999999999998
|
| >d1y1xa_ a.39.1.8 (A:) Programmed cell death 6 protein-like protein {Leishmania major [TaxId: 5664]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Programmed cell death 6 protein-like protein species: Leishmania major [TaxId: 5664]
Probab=99.31 E-value=1.1e-12 Score=112.42 Aligned_cols=83 Identities=30% Similarity=0.430 Sum_probs=73.1
Q ss_pred HHHHHHHhhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhhhCCCcHHHHHHHH
Q 042823 389 KQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIYKLETPELLEKAF 468 (477)
Q Consensus 389 ~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~l~~aF 468 (477)
.++++++|+.+|.|++|+|+.+||..+|+.+|..+++.+++.+++.+|.+++|.|+|.+|...+... ..+..+|
T Consensus 17 ~~~l~~~F~~~D~d~dG~Is~~El~~~l~~l~~~~s~~~~~~l~~~~d~d~~~~i~~~ef~~~~~~~------~~~~~~F 90 (182)
T d1y1xa_ 17 NQELMEWFRAVDTDGSGAISVPELNAALSSAGVPFSLATTEKLLHMYDKNHSGEITFDEFKDLHHFI------LSMREGF 90 (182)
T ss_dssp TSCHHHHHHHHCTTCSSSBCHHHHHHHHCBTTBCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHH------HHHHHHH
T ss_pred HHHHHHHHHHHcCCCcCCCCHHHHHHHHHHhcccCchhhhhhhhccccccccccccccccccccccc------cccccch
Confidence 3579999999999999999999999999999999999999999999999999999999998877542 3577777
Q ss_pred HHhccCCCC
Q 042823 469 QYLDKNSDQ 477 (477)
Q Consensus 469 ~~~D~d~~G 477 (477)
+.+|++++|
T Consensus 91 ~~~D~~~~g 99 (182)
T d1y1xa_ 91 RKRDSSGDG 99 (182)
T ss_dssp HHHCTTSSS
T ss_pred hccccccch
Confidence 778877776
|
| >d1hqva_ a.39.1.8 (A:) Apoptosis-linked protein alg-2 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Apoptosis-linked protein alg-2 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.27 E-value=4.4e-12 Score=108.51 Aligned_cols=84 Identities=18% Similarity=0.283 Sum_probs=71.3
Q ss_pred HHHHHHHHhhhhcCCCCCCcCHHHHHHHHHHcCCC-CCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhhhCCCcHHHHHH
Q 042823 388 EKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSA-LEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIYKLETPELLEK 466 (477)
Q Consensus 388 ~~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~-~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~l~~ 466 (477)
+.+.|..+|+.+|+|++|+||.+||+.+|+.++.. .+.++++.+++.+|.+++|.|+|+||+.++... ..++.
T Consensus 17 ~~~~L~~iF~~~D~d~~G~Is~~E~~~~l~~~~~~~~~~~~~~~l~~~~D~d~~g~i~~~EFl~~~~~~------~~~~~ 90 (181)
T d1hqva_ 17 DQSFLWNVFQRVDKDRSGVISDNELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTGVWKYI------TDWQN 90 (181)
T ss_dssp CHHHHHHHHHHHCTTCCSSBCHHHHHHHCCCSSSSCCCHHHHHHHHHHHCCSSSSSBCHHHHHHHHHHH------HHHHH
T ss_pred cHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHcCCCcccHHHHHHHhhccccccccchhhhHHHhhhhhc------ccccc
Confidence 45678899999999999999999999999887754 688889999999999999999999999888653 36788
Q ss_pred HHHHhccCCCC
Q 042823 467 AFQYLDKNSDQ 477 (477)
Q Consensus 467 aF~~~D~d~~G 477 (477)
+|+.||++++|
T Consensus 91 ~f~~~D~~~~G 101 (181)
T d1hqva_ 91 VFRTYDRDNSG 101 (181)
T ss_dssp HHHHHCTTCCS
T ss_pred ccccccccccc
Confidence 88888888887
|
| >d1omra_ a.39.1.5 (A:) Recoverin {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Recoverin species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.26 E-value=5.4e-12 Score=110.02 Aligned_cols=92 Identities=18% Similarity=0.203 Sum_probs=75.6
Q ss_pred CChHHHHHHHHHhhhhcCCCCCCcCHHHHHHHHHHcCCCC-CHHHHHHHHHHhcCCCCCcccHHHHHHHHHhhhCCCcHH
Q 042823 384 LPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSAL-EESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIYKLETPE 462 (477)
Q Consensus 384 ~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~~-~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~ 462 (477)
++..+++.+.+.|. +.+++|.|+.+||+.+|..++... +...++.+++.+|.+++|.|+|.||+.++........++
T Consensus 22 f~~~ei~~l~~~F~--~~~~~G~is~~EF~~~l~~~~~~~~~~~~~~~if~~~D~~~~G~I~f~EF~~~~~~~~~~~~~~ 99 (201)
T d1omra_ 22 FTEEELSSWYQSFL--KECPSGRITRQEFQTIYSKFFPEADPKAYAQHVFRSFDANSDGTLDFKEYVIALHMTSAGKTNQ 99 (201)
T ss_dssp SCHHHHHHHHHHHH--HHCTTSEEEHHHHHHHHHHHCTTSCCHHHHHHHHHTTTSCSSSEEEHHHHHHHHHHHHSSCGGG
T ss_pred CCHHHHHHHHHHHH--HHCcCCCccHHHHHHHHHHhcCCCCHHHHHHHHHHHhccCCCCeEeehhHHHHHHhhcccchHH
Confidence 45556666666673 446789999999999999987644 455668899999999999999999999888776666777
Q ss_pred HHHHHHHHhccCCCC
Q 042823 463 LLEKAFQYLDKNSDQ 477 (477)
Q Consensus 463 ~l~~aF~~~D~d~~G 477 (477)
.++.+|++||+||+|
T Consensus 100 ~l~~~F~~~D~d~~G 114 (201)
T d1omra_ 100 KLEWAFSLYDVDGNG 114 (201)
T ss_dssp SHHHHHHHHCTTCSS
T ss_pred HHHHHHHHHccCCCC
Confidence 899999999999998
|
| >d1cb1a_ a.39.1.1 (A:) Calbindin D9K {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calbindin D9K domain: Calbindin D9K species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.25 E-value=1.2e-12 Score=94.53 Aligned_cols=69 Identities=20% Similarity=0.308 Sum_probs=60.1
Q ss_pred HHHHHHHHHhhhhcC-C-CCCCcCHHHHHHHHHHc--CCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhh
Q 042823 387 KEKQKLMEKFREMDT-D-NSDTLTLSELKAGLAKL--GSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDI 455 (477)
Q Consensus 387 ~~~~~l~~~F~~~D~-~-~~G~I~~~el~~~l~~~--g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~ 455 (477)
...++++.+|..||. + ++|+|+.+||+.+|+.+ +..+++++++++++.+|.|+||.|+|+||+.+|.+.
T Consensus 4 ~~~~~l~~~F~~y~~~d~~~g~is~~Elk~ll~~~~~~~~~~~~~v~~~~~~~D~d~dG~Idf~EF~~l~~~l 76 (78)
T d1cb1a_ 4 KSPAELKSIFEKYAAKEGDPNQLSKEELKQLIQAEFPSLLKGPRTLDDLFQELDKNGDGEVSFEEFQVLVKKI 76 (78)
T ss_dssp CCHHHHHHHHHHHHTTSSSTTEECHHHHHHHHHHHCSSCCSSCCCSSHHHHHTCCCSSSSEEHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHccCCCCCCEECHHHHHHHHHHHcCCCCCCHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHH
Confidence 346789999999975 3 46999999999999997 556677789999999999999999999999999764
|
| >d1c07a_ a.39.1.6 (A:) Eps15 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Eps15 homology domain (EH domain) domain: Eps15 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.24 E-value=5.4e-12 Score=95.04 Aligned_cols=68 Identities=21% Similarity=0.233 Sum_probs=63.0
Q ss_pred CChHHHHHHHHHhhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHH
Q 042823 384 LPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMT 453 (477)
Q Consensus 384 ~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~ 453 (477)
++.++.+.++++|+.+|+|++|+|+.+|++.+|...| +++++++++++.+|.|+||.|+|+||+.+|.
T Consensus 4 lt~~e~~~~~~~F~~~D~d~~G~is~~e~~~~l~~~~--l~~~~l~~i~~~~D~d~dG~l~~~EF~~am~ 71 (95)
T d1c07a_ 4 VSPAEKAKYDEIFLKTDKDMDGFVSGLEVREIFLKTG--LPSTLLAHIWSLCDTKDCGKLSKDQFALAFH 71 (95)
T ss_dssp SCSHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHTTT--CCHHHHHHHHHHHCTTCSSSEETTTHHHHHH
T ss_pred CCHHHHHHHHHHHHHHCCCCCCCCcHHHHHHHHHhcC--CCHHHHHHHHHHhCCCCCCeEcHHHHHHHHH
Confidence 5678888999999999999999999999999999876 6789999999999999999999999998774
|
| >d1fi6a_ a.39.1.6 (A:) Reps1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Eps15 homology domain (EH domain) domain: Reps1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.24 E-value=1.1e-11 Score=92.78 Aligned_cols=68 Identities=21% Similarity=0.292 Sum_probs=63.2
Q ss_pred CChHHHHHHHHHhhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHH
Q 042823 384 LPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMT 453 (477)
Q Consensus 384 ~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~ 453 (477)
++.++.+.++++|+.+|+|++|+|+.+|++.+|...| ++.+++.++++.+|.|++|.|+|+||+.+|.
T Consensus 3 ls~ee~~~y~~~F~~~D~d~~G~i~~~e~~~~l~~~~--l~~~~l~~i~~~~D~d~dG~l~~~EF~~a~~ 70 (92)
T d1fi6a_ 3 ITDEQRQYYVNQFKTIQPDLNGFIPGSAAKEFFTKSK--LPILELSHIWELSDFDKDGALTLDEFCAAFH 70 (92)
T ss_dssp CCHHHHHHHHHHHTTTCCSTTCEEEHHHHHHHHHHHS--SCHHHHHHHHHHHCTTCSSEEEHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCcccchhHHHHHHHHHHcc--CCHHHHHHHHHHhCCCCCCeecHHHHHHHHH
Confidence 6778889999999999999999999999999999986 6789999999999999999999999987664
|
| >d1k94a_ a.39.1.8 (A:) Grancalcin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Grancalcin species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.22 E-value=1.2e-11 Score=103.48 Aligned_cols=77 Identities=16% Similarity=0.221 Sum_probs=55.5
Q ss_pred HHhhhhcCCCCCCcCHHHHHHHHHHcCCCC-----CHHHHHHHHHHhcCCCCCcccHHHHHHHHHhhhCCCcHHHHHHHH
Q 042823 394 EKFREMDTDNSDTLTLSELKAGLAKLGSAL-----EESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIYKLETPELLEKAF 468 (477)
Q Consensus 394 ~~F~~~D~~~~G~I~~~el~~~l~~~g~~~-----~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~l~~aF 468 (477)
..|+.+ .+.+|.|+.+||+.+|+.+|.+. +.+.++.+++.+|.+++|.|+|+||+.++... +.++.+|
T Consensus 4 ~~F~~~-a~~dG~I~~~EL~~~L~~~g~~~~~~~~s~~~~~~li~~~D~~~~G~i~~~EF~~l~~~~------~~~~~~F 76 (165)
T d1k94a_ 4 TYFSAV-AGQDGEVDAEELQRCLTQSGINGTYSPFSLETCRIMIAMLDRDHTGKMGFNAFKELWAAL------NAWKENF 76 (165)
T ss_dssp HHHHHH-HGGGTSBCHHHHHHHHHHHTTTTTSCCCCHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHH------HHHHHHH
T ss_pred HHHHHh-cCCCCCCCHHHHHHHHHHcCCCCCcccCCHHHHHHHHHHhCCCCCCcCcHHHHHHHhhcc------chhHHHH
Confidence 344444 46788888888888887777543 45677778888888888888888887776542 4677788
Q ss_pred HHhccCCCC
Q 042823 469 QYLDKNSDQ 477 (477)
Q Consensus 469 ~~~D~d~~G 477 (477)
+.||+|++|
T Consensus 77 ~~fD~d~sG 85 (165)
T d1k94a_ 77 MTVDQDGSG 85 (165)
T ss_dssp HHHCTTCCS
T ss_pred HHhCCCCCC
Confidence 888888777
|
| >d1zfsa1 a.39.1.2 (A:1-93) Calcyclin (S100) {Rat (Rattus norvegicus), s100a1 [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Rat (Rattus norvegicus), s100a1 [TaxId: 10116]
Probab=99.21 E-value=1.3e-11 Score=92.44 Aligned_cols=68 Identities=25% Similarity=0.351 Sum_probs=60.2
Q ss_pred HHHHHHHHhhhh-cCCCC-CCcCHHHHHHHHHHcC-----CCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhh
Q 042823 388 EKQKLMEKFREM-DTDNS-DTLTLSELKAGLAKLG-----SALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDI 455 (477)
Q Consensus 388 ~~~~l~~~F~~~-D~~~~-G~I~~~el~~~l~~~g-----~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~ 455 (477)
.++.+.++|..| |+||+ |+|+.+||+.+|+.++ .++++++++++++.+|.|+||.|+|+||+.+|...
T Consensus 7 ~i~~l~~~F~~y~d~dg~~G~is~~El~~~L~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~Idf~EF~~lm~~l 81 (93)
T d1zfsa1 7 AMETLINVFHAHSGKEGDKYKLSKKELKDLLQTELSSFLDVQKDADAVDKIMKELDENGDGEVDFQEFVVLVAAL 81 (93)
T ss_dssp HHHHHHHHHHHHGGGSSCCSSEEHHHHHHHHHHHSTTTSCCSSCHHHHHHHHHHHTTTCCSEECSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcccCCCCCEecHHHHHHHHHHhcccccccCCCHHHHHHHHHHHcCCCCCCCcHHHHHHHHHHH
Confidence 357889999998 88875 9999999999998865 35688999999999999999999999999999753
|
| >d2zfda1 a.39.1.5 (A:32-214) Calcineurin B-like protein 2 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcineurin B-like protein 2 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.21 E-value=3.6e-11 Score=102.95 Aligned_cols=95 Identities=16% Similarity=0.202 Sum_probs=82.4
Q ss_pred hcCChHHHHHHHHHhhhhcCC--CCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhhhC-C
Q 042823 382 ENLPTKEKQKLMEKFREMDTD--NSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIYK-L 458 (477)
Q Consensus 382 ~~~~~~~~~~l~~~F~~~D~~--~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~~~-~ 458 (477)
..++.++++.|++.|..+|.+ ++|.|+.+||+.++...+...+. .++.+++.+|.+++|.|+|.||+..+..... .
T Consensus 9 t~Fs~~ei~~L~~~F~~~d~~~~~~G~i~~~ef~~~l~~~~~~~~~-~~~~lf~~~d~~~dg~I~f~EFl~~l~~~~~~~ 87 (183)
T d2zfda1 9 TVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESL-FADRVFDLFDTKHNGILGFEEFARALSVFHPNA 87 (183)
T ss_dssp SSCCHHHHHHHHHHHHHHHTSSSCSSSBCHHHHHHHHHSCSSCCCH-HHHHHHHHHCSSCSSSBCHHHHHHHHHHTSTTS
T ss_pred CCCCHHHHHHHHHHHHHHCcCCCCCCcCcHHHHHHHHHhcCCCCCH-HHHHHHHHHccCCCCcCcHHHHHHHHHhhhccC
Confidence 467889999999999999876 69999999999999888776554 6789999999999999999999998876544 3
Q ss_pred CcHHHHHHHHHHhccCCCC
Q 042823 459 ETPELLEKAFQYLDKNSDQ 477 (477)
Q Consensus 459 ~~~~~l~~aF~~~D~d~~G 477 (477)
..++.+..+|++||+||+|
T Consensus 88 ~~~~~~~~~F~~~D~d~~G 106 (183)
T d2zfda1 88 PIDDKIHFSFQLYDLKQQG 106 (183)
T ss_dssp CHHHHHHHHHHHHCTTSSS
T ss_pred cHHHHHHHhhcccccCCCC
Confidence 4567899999999999998
|
| >d1yuta1 a.39.1.2 (A:1-98) Calcyclin (S100) {Human (Homo sapiens), s100a13 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100a13 [TaxId: 9606]
Probab=99.19 E-value=1.5e-11 Score=92.78 Aligned_cols=68 Identities=13% Similarity=0.294 Sum_probs=59.0
Q ss_pred HHHHHHHHhhhh-cCCCC-CCcCHHHHHHHHHHcCC--CCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhh
Q 042823 388 EKQKLMEKFREM-DTDNS-DTLTLSELKAGLAKLGS--ALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDI 455 (477)
Q Consensus 388 ~~~~l~~~F~~~-D~~~~-G~I~~~el~~~l~~~g~--~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~ 455 (477)
.++.+..+|..| |.|++ |+|+.+||+.+|+.++. ..++++++++++.+|.|+||.|+|+||+.++...
T Consensus 12 ~i~~l~~vF~~y~d~dg~~g~is~~El~~~l~~~~~~~~~~~~~v~~l~~~~D~d~DG~IdF~EF~~l~~~l 83 (98)
T d1yuta1 12 SIETVVTTFFTFARQEGRKDSLSVNEFKELVTQQLPHLLKDVGSLDEKMKSLDVNQDSELKFNEYWRLIGEL 83 (98)
T ss_dssp HHHHHHHHHHHHHTTSSSSSCBCHHHHHHHHHHHCTTTTCCSSCHHHHHHHHCTTCCSCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcccCCCCCEEcHHHHHHHHHHhccccCCCHHHHHHHHHHhcCCCCCcCCHHHHHHHHHHH
Confidence 457889999998 78875 99999999999998643 4566779999999999999999999999999753
|
| >d1alva_ a.39.1.8 (A:) Calpain small (regulatory) subunit (domain VI) {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Calpain small (regulatory) subunit (domain VI) species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.19 E-value=1.6e-11 Score=104.16 Aligned_cols=83 Identities=17% Similarity=0.245 Sum_probs=72.0
Q ss_pred HHHHHHHHhhhhcCCCCCCcCHHHHHHHHHHcCCC--------CCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhhhCCC
Q 042823 388 EKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSA--------LEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIYKLE 459 (477)
Q Consensus 388 ~~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~--------~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~~ 459 (477)
++.+++++|+.+|. ++|.|+.+||+.+|+.+|.. .+.+.+..++..+|.+++|.|+|+||+.++...
T Consensus 2 e~~~~r~~F~~~d~-~dg~I~~~EL~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~~d~d~~g~i~~~ef~~~~~~~---- 76 (173)
T d1alva_ 2 EVRQFRRLFAQLAG-DDMEVSATELMNILNKVVTRHPDLKTDGFGIDTCRSMVAVMDSDTTGKLGFEEFKYLWNNI---- 76 (173)
T ss_dssp HHHHHHHHHHHHHG-GGTSBCHHHHHHHHHHHHHTCSTTCCSCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHH----
T ss_pred hHHHHHHHHHHHcC-CCCcCCHHHHHHHHHHhCCCcchhhhccCCHHHHHHHHHHhccCCCCcccchhhhhhhhhh----
Confidence 57789999999994 48999999999999987643 567889999999999999999999999987643
Q ss_pred cHHHHHHHHHHhccCCCC
Q 042823 460 TPELLEKAFQYLDKNSDQ 477 (477)
Q Consensus 460 ~~~~l~~aF~~~D~d~~G 477 (477)
..+..+|+.||+|++|
T Consensus 77 --~~~~~~f~~~D~d~~G 92 (173)
T d1alva_ 77 --KKWQAIYKQFDVDRSG 92 (173)
T ss_dssp --HHHHHHHHHHCTTCCS
T ss_pred --hHHHHHHHHhccCCCC
Confidence 4688899999999988
|
| >d1juoa_ a.39.1.8 (A:) Sorcin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Sorcin species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.19 E-value=9.9e-12 Score=105.35 Aligned_cols=84 Identities=18% Similarity=0.234 Sum_probs=71.2
Q ss_pred HHHHHHHHHhhhhcCCCCCCcCHHHHHHHHHHcCCC-----CCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhhhCCCcH
Q 042823 387 KEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSA-----LEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIYKLETP 461 (477)
Q Consensus 387 ~~~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~-----~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~ 461 (477)
++.+.++..|+.++ ++||.|+.+||+.+|+++|.+ ++.++++.++..+|.|++|.|+|+||+.++...
T Consensus 4 ~~~~~~~~~F~~~~-~~dG~Is~~EL~~~L~~~g~~~~~~~~~~~~v~~l~~~~D~d~~G~I~f~EF~~~~~~~------ 76 (172)
T d1juoa_ 4 QTQDPLYGYFAAVA-GQDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFKELWAVL------ 76 (172)
T ss_dssp CCCCTTHHHHHHHH-TTTTEECHHHHHHHHHHHTTTCSSCCCCHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHH------
T ss_pred chHHHHHHHHHHhC-CCCCCCCHHHHHHHHHHcCCCCCcccCCHHHHHHHHHHHCCCCCCceehHHHHHHHHhh------
Confidence 34456788999987 789999999999999998865 457889999999999999999999999888643
Q ss_pred HHHHHHHHHhccCCCC
Q 042823 462 ELLEKAFQYLDKNSDQ 477 (477)
Q Consensus 462 ~~l~~aF~~~D~d~~G 477 (477)
..+..+|+.||+|++|
T Consensus 77 ~~~~~~f~~~D~d~sG 92 (172)
T d1juoa_ 77 NGWRQHFISFDTDRSG 92 (172)
T ss_dssp HHHHHHHHTTCTTCCS
T ss_pred hhhhHHHHHhCcCCCC
Confidence 4678899999999987
|
| >d3c1va1 a.39.1.2 (A:2-94) Calcyclin (S100) {Human (Homo sapiens), s100a4 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100a4 [TaxId: 9606]
Probab=99.19 E-value=3.7e-11 Score=89.60 Aligned_cols=68 Identities=22% Similarity=0.372 Sum_probs=60.0
Q ss_pred HHHHHHHHhhhh-cCCCCC-CcCHHHHHHHHHH-----cCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhh
Q 042823 388 EKQKLMEKFREM-DTDNSD-TLTLSELKAGLAK-----LGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDI 455 (477)
Q Consensus 388 ~~~~l~~~F~~~-D~~~~G-~I~~~el~~~l~~-----~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~ 455 (477)
.++.+.++|..| |.|++| +|+.+||+.+|+. ++...++++++++++.+|.|+||.|+|+||+.+|.+.
T Consensus 7 ~i~~l~~~F~~ya~~dg~~~~L~~~Elk~~l~~~~~~~~~~~~~~~~~~~i~~~~D~n~DG~I~F~EF~~lm~~l 81 (93)
T d3c1va1 7 ALDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVFLSCI 81 (93)
T ss_dssp HHHHHHHHHHHHHTSSSSTTEECHHHHHHHHHHHCHHHHTTCCSHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHccCCCCCCeeCHHHHHHHHHHhchhccccCCCHHHHHHHHHHHcCCCCCCCCHHHHHHHHHHH
Confidence 457899999998 677655 7999999999987 4667899999999999999999999999999999764
|
| >d1a4pa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), P11 s100a10, calpactin [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), P11 s100a10, calpactin [TaxId: 9606]
Probab=99.19 E-value=8.9e-12 Score=92.81 Aligned_cols=67 Identities=19% Similarity=0.293 Sum_probs=59.1
Q ss_pred HHHHHHHHhhhhcCCCCCCcCHHHHHHHHHHc-----CCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhh
Q 042823 388 EKQKLMEKFREMDTDNSDTLTLSELKAGLAKL-----GSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDI 455 (477)
Q Consensus 388 ~~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~-----g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~ 455 (477)
.++.+..+|..||.| +|+|+.+||+.+|... +...++..++++++.+|.|+||.|+|+||+.++...
T Consensus 7 ~ie~l~~~F~~yd~d-dG~is~~El~~~l~~~~~~~~~~~~~~~~v~~~~~~~D~n~DG~I~F~EF~~li~~l 78 (92)
T d1a4pa_ 7 AMETMMFTFHKFAGD-KGYLTKEDLRVLMEKEFPGFLENQKDPLAVDKIMKDLDQCRDGKVGFQSFFSLIAGL 78 (92)
T ss_dssp HHHHHHHHHHHHHGG-GCSBCHHHHHHHHHHHCHHHHHHSCCTTHHHHHHHHHCTTSSSCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCC-CCEEcHHHHHHHHHHhccccccccCCHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHH
Confidence 467899999999987 8999999999999873 445677789999999999999999999999998753
|
| >d1fpwa_ a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Frequenin (neuronal calcium sensor 1) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.17 E-value=1e-10 Score=100.74 Aligned_cols=137 Identities=20% Similarity=0.300 Sum_probs=98.0
Q ss_pred CCCCccHHHHHHHHHhhCCCCCHHHHHHHHHHhh---ccc--hHHHH---Hhc-CCh-HHHHHHHHHhhhhcCCCCCCcC
Q 042823 339 KNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVK---NSS--TLESL---CEN-LPT-KEKQKLMEKFREMDTDNSDTLT 408 (477)
Q Consensus 339 ~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d---~~~--~~~~~---~~~-~~~-~~~~~l~~~F~~~D~~~~G~I~ 408 (477)
+.+.++.+++....+. ..+++.++..+.+.+. +++ +..++ ... ... ........+|+.+|.+++|.|+
T Consensus 4 ~~S~l~~e~l~~l~~~--t~fs~~Ei~~l~~~F~~~~~~G~i~~~ef~~~~~~~~~~~~~~~~~~~if~~~D~~~~G~I~ 81 (190)
T d1fpwa_ 4 KTSKLSKDDLTCLKQS--TYFDRREIQQWHKGFLRDCPSGQLAREDFVKIYKQFFPFGSPEDFANHLFTVFDKDNNGFIH 81 (190)
T ss_dssp CSCCSTTHHHHHHTTT--CCSTHHHHHHHHHHHHHHCTTCCEEHHHHHHHHHHHCTTSCCSHHHHHHHHTCCSSCSSEEC
T ss_pred ccCCCCHHHHHHHHHH--cCCCHHHHHHHHHHHHHHCCCCCccHHHHHHHHHHHCCCCChHHHHHHHHHHhCcCCCCccc
Confidence 3445666666543222 2357777877766652 222 22222 221 111 1122346789999999999999
Q ss_pred HHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhhhC------------CCcHHHHHHHHHHhccCCC
Q 042823 409 LSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIYK------------LETPELLEKAFQYLDKNSD 476 (477)
Q Consensus 409 ~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~~~------------~~~~~~l~~aF~~~D~d~~ 476 (477)
.+||..++..++....++.++.+++.+|.|++|.|+++||..++..... ...++.+..+|+.+|.|+|
T Consensus 82 ~~Ef~~~~~~~~~~~~~e~~~~~F~~~D~d~dG~is~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~if~~~D~d~d 161 (190)
T d1fpwa_ 82 FEEFITVLSTTSRGTLEEKLSWAFELYDLNHDGYITFDEMLTIVASVYKMMGSMVTLNEDEATPEMRVKKIFKLMDKNED 161 (190)
T ss_dssp HHHHHHHHHHHSCCCSTHHHHHHHHHHCSSCSSEEEHHHHHHHHHHHHTTSCSTTSSSCCCCCHHHHHHHHHHHHTTTCS
T ss_pred HHHHHHHHHHHccCchHHHHHHHHHHhccCCCCcCcHHHHHHHHHHHHHhcccccCCCchhhhHHHHHHHHHHHhCCCCC
Confidence 9999999999988888999999999999999999999999999875432 1124668889999999999
Q ss_pred C
Q 042823 477 Q 477 (477)
Q Consensus 477 G 477 (477)
|
T Consensus 162 G 162 (190)
T d1fpwa_ 162 G 162 (190)
T ss_dssp S
T ss_pred C
Confidence 8
|
| >d1ksoa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100a3 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100a3 [TaxId: 9606]
Probab=99.17 E-value=3.4e-11 Score=89.51 Aligned_cols=69 Identities=22% Similarity=0.341 Sum_probs=60.5
Q ss_pred HHHHHHHHHhhhh-cCCCCC-CcCHHHHHHHHHHc-----CCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhh
Q 042823 387 KEKQKLMEKFREM-DTDNSD-TLTLSELKAGLAKL-----GSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDI 455 (477)
Q Consensus 387 ~~~~~l~~~F~~~-D~~~~G-~I~~~el~~~l~~~-----g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~ 455 (477)
+.+..+..+|..| |+||+| +|+.+||+.+|+.. +...++.+++++++.+|.|+||.|+|+||+.+|...
T Consensus 6 ~~i~~i~~vF~kya~~dGd~~~ls~~Elk~ll~~~~~~~~~~~~~~~~~~~~~~~lD~n~Dg~IdF~EF~~l~~~l 81 (93)
T d1ksoa_ 6 QAVAAIVCTFQEYAGRCGDKYKLCQAELKELLQKELATWTPTEFRECDYNKFMSVLDTNKDCEVDFVEYVRSLACL 81 (93)
T ss_dssp HHHHHHHHHHHHHHTSSSCTTCEEHHHHHHHHHHHTTTCCCCTTCHHHHHHHHHHHHHTTTCEECHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCcCCCCCeECHHHHHHHHHHhhhcccccCCCHHHHHHHHHHHcCCCCCCCcHHHHHHHHHHH
Confidence 3457888999998 999999 59999999999874 445678999999999999999999999999998764
|
| >d1df0a1 a.39.1.8 (A:515-700) Calpain large subunit, C-terminal domain (domain IV) {Rat (Rattus norvegicus), M-type [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Calpain large subunit, C-terminal domain (domain IV) species: Rat (Rattus norvegicus), M-type [TaxId: 10116]
Probab=99.16 E-value=1.8e-11 Score=105.06 Aligned_cols=81 Identities=19% Similarity=0.290 Sum_probs=71.0
Q ss_pred HHHHHHhhhhcCCCCCCcCHHHHHHHHHHcCC--------CCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhhhCCCcH
Q 042823 390 QKLMEKFREMDTDNSDTLTLSELKAGLAKLGS--------ALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIYKLETP 461 (477)
Q Consensus 390 ~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~--------~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~ 461 (477)
+.++++|..+| +++|.|+.+||+.+|+.+|. .++.+++..+++.+|.|++|.|+|+||+.++...
T Consensus 18 ~~~r~~F~~~d-~~dG~Is~~EL~~~L~~~~~~~~~~~~~~~s~~~~~~l~~~~D~d~~G~I~~~EF~~~~~~~------ 90 (186)
T d1df0a1 18 DGFRRLFAQLA-GEDAEISAFELQTILRRVLAKREDIKSDGFSIETCKIMVDMLDEDGSGKLGLKEFYILWTKI------ 90 (186)
T ss_dssp HHHHHHHHHHH-GGGTCEEHHHHHHHHHHHHHC----CCCCCCHHHHHHHHHHHCCSSSSEECHHHHHHHHHHH------
T ss_pred HHHHHHHHHHc-CCCCeEcHHHHHHHHHHhcccccccccccCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHhH------
Confidence 56889999998 89999999999999988753 3567889999999999999999999999987653
Q ss_pred HHHHHHHHHhccCCCC
Q 042823 462 ELLEKAFQYLDKNSDQ 477 (477)
Q Consensus 462 ~~l~~aF~~~D~d~~G 477 (477)
+.+..+|+.||+|++|
T Consensus 91 ~~~~~~F~~~D~d~sG 106 (186)
T d1df0a1 91 QKYQKIYREIDVDRSG 106 (186)
T ss_dssp HHHHHHHHHHCTTCCS
T ss_pred HHHHHHHHhhCCCCCC
Confidence 4788999999999998
|
| >d1bjfa_ a.39.1.5 (A:) Neurocalcin {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Neurocalcin species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.16 E-value=7.6e-11 Score=100.69 Aligned_cols=93 Identities=19% Similarity=0.226 Sum_probs=78.7
Q ss_pred cCChHHHHHHHHHhhhhcCCCCCCcCHHHHHHHHHHcCCCCC-HHHHHHHHHHhcCCCCCcccHHHHHHHHHhhhCCCcH
Q 042823 383 NLPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALE-ESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIYKLETP 461 (477)
Q Consensus 383 ~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~~~-~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~ 461 (477)
.++.++++.+...|. +.+++|.|+.+||..++..++.... ...++++++.+|.+++|.|+|+||+..+........+
T Consensus 17 ~fs~~ei~~l~~~F~--~~~~~g~i~~~ef~~~l~~~~~~~~~~~~~~~lf~~~d~~~~g~i~~~eFl~~~~~~~~~~~~ 94 (181)
T d1bjfa_ 17 DFTEHEIQEWYKGFL--RDCPSGHLSMEEFKKIYGNFFPYGDASKFAEHVFRTFDANGDGTIDFREFIIALSVTSRGKLE 94 (181)
T ss_dssp SCCHHHHHHHHHHHH--HHSTTSEEEHHHHHHHHTTTSSSSCCHHHHHHHHHHHCSSCSSEEEHHHHHHHHHHHTSSCHH
T ss_pred CCCHHHHHHHHHHHH--hhCCCCCcCHHHHHHHHHHhCCCCCHHHHHHHHHHhcCCCCCCcEeHHHHHHHHHHHhhhchH
Confidence 466677777777774 3468999999999999998875554 4567899999999999999999999999877766777
Q ss_pred HHHHHHHHHhccCCCC
Q 042823 462 ELLEKAFQYLDKNSDQ 477 (477)
Q Consensus 462 ~~l~~aF~~~D~d~~G 477 (477)
+.++.+|+.||.|++|
T Consensus 95 ~~~~~~f~~~D~d~dg 110 (181)
T d1bjfa_ 95 QKLKWAFSMYDLDGNG 110 (181)
T ss_dssp HHHHHHHHHHCTTCSS
T ss_pred HHHHHHHHHhccCCCC
Confidence 8899999999999998
|
| >d1k8ua_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100a6 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100a6 [TaxId: 9606]
Probab=99.14 E-value=2.5e-11 Score=89.41 Aligned_cols=68 Identities=25% Similarity=0.422 Sum_probs=61.4
Q ss_pred HHHHHHHHhhhh-cCCCCC-CcCHHHHHHHHHH---cCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhh
Q 042823 388 EKQKLMEKFREM-DTDNSD-TLTLSELKAGLAK---LGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDI 455 (477)
Q Consensus 388 ~~~~l~~~F~~~-D~~~~G-~I~~~el~~~l~~---~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~ 455 (477)
.+..+..+|..| |+|++| +|+..||+.+++. .|...++++++++++.+|.|+||.|+|+||+.++...
T Consensus 7 ai~~ii~vF~kya~~dg~~~~ls~~Elk~Ll~~e~~~~~~~~~~~~~~~~~~lD~d~Dg~IdF~EF~~l~~~l 79 (89)
T d1k8ua_ 7 AIGLLVAIFHKYSGREGDKHTLSKKELKELIQKELTIGSKLQDAEIARLMEDLDRNKDQEVNFQEYVTFLGAL 79 (89)
T ss_dssp HHHHHHHHHHHHHTSSSCTTEEEHHHHHHHHHHHSCCGGGTTSHHHHHHHHHHHHTTTCEEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcccCCCCCeecHHHHHHHHHHHHHhhccCCHHHHHHHHHHhcCCCCCCCcHHHHHHHHHHH
Confidence 457888999998 999999 6999999999988 5777888999999999999999999999999999753
|
| >d1qxpa2 a.39.1.8 (A:515-702) Calpain large subunit, C-terminal domain (domain IV) {Rat (Rattus norvegicus), mu-type [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Calpain large subunit, C-terminal domain (domain IV) species: Rat (Rattus norvegicus), mu-type [TaxId: 10116]
Probab=99.12 E-value=3e-12 Score=109.73 Aligned_cols=86 Identities=20% Similarity=0.301 Sum_probs=60.2
Q ss_pred ChHHH-HHHHHHhhhhcCCCCCCcCHHHHHHHHHHcCCC--------CCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhh
Q 042823 385 PTKEK-QKLMEKFREMDTDNSDTLTLSELKAGLAKLGSA--------LEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDI 455 (477)
Q Consensus 385 ~~~~~-~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~--------~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~ 455 (477)
+++++ +.++++|+.+| +++|.|+.+||+.+|..+|.. ++.+.++.++..+|.|++|.|+|+||..++...
T Consensus 14 s~~~~~~~~r~~F~~~d-~~dG~Is~~EL~~~L~~~~~~~~~~~~~~~s~e~~~~li~~~D~d~~G~i~~~EF~~l~~~~ 92 (188)
T d1qxpa2 14 SEEEIDDNFKTLFSKLA-GDDMEISVKELQTILNRIISKHKDLRTNGFSLESCRSMVNLMDRDGNGKLGLVEFNILWNRI 92 (188)
T ss_dssp -------------CCCC-CSSSSCCCSCTTTTTCC---------CCCCCHHHHHHHHHHHCC--CCCCCSSSHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHc-CCCCEECHHHHHHHHHHhCccccccccccCCHHHHHHHHHHhcCCCCCcccHHHHHHHHhhh
Confidence 34443 45899999999 558999999999998776543 456789999999999999999999999988643
Q ss_pred hCCCcHHHHHHHHHHhccCCCC
Q 042823 456 YKLETPELLEKAFQYLDKNSDQ 477 (477)
Q Consensus 456 ~~~~~~~~l~~aF~~~D~d~~G 477 (477)
+.++.+|+.||+|++|
T Consensus 93 ------~~~~~~F~~~D~d~sG 108 (188)
T d1qxpa2 93 ------RNYLTIFRKFDLDKSG 108 (188)
T ss_dssp ------HHHHHHHGGGCTTCCS
T ss_pred ------HHHHHHHHHhCCCCCC
Confidence 4788999999999998
|
| >d1xk4a1 a.39.1.2 (A:1-87) Calcyclin (S100) {Human (Homo sapiens), calgranulin s100a8, MRP8 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), calgranulin s100a8, MRP8 [TaxId: 9606]
Probab=99.11 E-value=2.6e-11 Score=89.03 Aligned_cols=68 Identities=13% Similarity=0.229 Sum_probs=60.3
Q ss_pred HHHHHHHHhhhh-cCCCCCCc-CHHHHHHHHHH-cCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhh
Q 042823 388 EKQKLMEKFREM-DTDNSDTL-TLSELKAGLAK-LGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDI 455 (477)
Q Consensus 388 ~~~~l~~~F~~~-D~~~~G~I-~~~el~~~l~~-~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~ 455 (477)
.++.+..+|..| |+||+|.+ +.+||+.++.. +|..+++++++++++++|.|+||.|+|+||+.++.+.
T Consensus 8 ai~~ii~~F~kya~~dG~~~~l~~~Elk~ll~~e~~~~~~~~~v~~i~~~~D~n~DG~IdF~EF~~l~~~l 78 (87)
T d1xk4a1 8 ALNSIIDVYHKYSLIKGNFHAVYRDDLKKLLETESPQYIRKKGADVWFKELDINTDGAVNFQEFLILVIKM 78 (87)
T ss_dssp HHHHHHHHHHHHHTSSSCTTCBCHHHHHHHHHHHSCHHHHTTCHHHHHHHHCTTCSSSBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcccCCCCCccCHHHHHHHHHHhcCCccchHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence 356788999998 99999965 89999999976 7877888889999999999999999999999999763
|
| >d1g8ia_ a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Frequenin (neuronal calcium sensor 1) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.10 E-value=2.6e-10 Score=97.86 Aligned_cols=92 Identities=18% Similarity=0.157 Sum_probs=76.1
Q ss_pred CChHHHHHHHHHhhhhcCCCCCCcCHHHHHHHHHHcCCCCCH-HHHHHHHHHhcCCCCCcccHHHHHHHHHhhhCCCcHH
Q 042823 384 LPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEE-SEVNQYMEAGDIDGNGNIDSIEFVNLMTDIYKLETPE 462 (477)
Q Consensus 384 ~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~~~~-~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~ 462 (477)
++..++..|...|... +++|.|+.+++..++..++..... ..++.+++.+|.+++|.|+|.||+..+........++
T Consensus 19 fs~~Ei~~l~~~F~~~--~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~if~~~d~~~dg~I~~~EF~~~l~~~~~~~~~e 96 (187)
T d1g8ia_ 19 FTEKEVQQWYKGFIKD--CPSGQLDAAGFQKIYKQFFPFGDPTKFATFVFNVFDENKDGRIEFSEFIQALSVTSRGTLDE 96 (187)
T ss_dssp SCHHHHHHHHHHHHHH--CTTSEEEHHHHHHHHHHHCTTSCTHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHHCCHHH
T ss_pred CCHHHHHHHHHHHHHH--CCCCCcCHHHHHHHHHHhcCCCCHHHHHHHHHHHhCcCCCCCCcHHHHHHHHHHhccCchhh
Confidence 4566666676777544 578999999999999998766654 4457899999999999999999999998766666678
Q ss_pred HHHHHHHHhccCCCC
Q 042823 463 LLEKAFQYLDKNSDQ 477 (477)
Q Consensus 463 ~l~~aF~~~D~d~~G 477 (477)
.++.+|+.||.||||
T Consensus 97 ~l~~~F~~~D~d~dG 111 (187)
T d1g8ia_ 97 KLRWAFKLYDLDNDG 111 (187)
T ss_dssp HHHHHHHHHCTTCSS
T ss_pred hHHHHHHHHhcCCCC
Confidence 899999999999998
|
| >d1s6ca_ a.39.1.5 (A:) Kchip1, Kv4 potassium channel-interacting protein {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Kchip1, Kv4 potassium channel-interacting protein species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.09 E-value=1e-10 Score=99.52 Aligned_cols=93 Identities=20% Similarity=0.222 Sum_probs=76.2
Q ss_pred cCChHHHHHHHHHhhhhcCCCCCCcCHHHHHHHHHHcCCCC-CHHHHHHHHHHhcCCCCCcccHHHHHHHHHhhhCCCcH
Q 042823 383 NLPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSAL-EESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIYKLETP 461 (477)
Q Consensus 383 ~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~~-~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~ 461 (477)
.++..+++.+.+.|. +.+++|.|+.+||+.+|..++... +...++.+++.+|.+++|.|+|+||+.++........+
T Consensus 9 ~ft~~ei~~l~~~F~--~~~~~G~is~~ef~~~l~~~~~~~~~~~~~~~lf~~~D~~~~g~I~~~EFl~~~~~~~~~~~~ 86 (178)
T d1s6ca_ 9 NFTKRELQVLYRGFK--NECPSGVVNEETFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVKFEDFVTALSILLRGTVH 86 (178)
T ss_dssp SCCHHHHHHHHHHHH--HHCTTSEECHHHHHHHHHHHSTTSCCHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHHCCHH
T ss_pred CCCHHHHHHHHHHHH--HHCcCCCccHHHHHHHHHHhCCCCCHHHHHHHHHHHHCCCCCCcccHHHHHHHHHHHhccchH
Confidence 355666666666664 456789999999999999987654 45556999999999999999999999998766666677
Q ss_pred HHHHHHHHHhccCCCC
Q 042823 462 ELLEKAFQYLDKNSDQ 477 (477)
Q Consensus 462 ~~l~~aF~~~D~d~~G 477 (477)
+.+..+|+.||.|++|
T Consensus 87 ~~~~~~f~~~D~~~~g 102 (178)
T d1s6ca_ 87 EKLRWTFNLYDINKDG 102 (178)
T ss_dssp HHHHHHHHHHCTTCSS
T ss_pred HHHHHHHHhhccCCCC
Confidence 8999999999999998
|
| >d2jxca1 a.39.1.6 (A:121-215) Eps15 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Eps15 homology domain (EH domain) domain: Eps15 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.09 E-value=1e-10 Score=87.69 Aligned_cols=67 Identities=24% Similarity=0.265 Sum_probs=61.5
Q ss_pred CChHHHHHHHHHhhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHH
Q 042823 384 LPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMT 453 (477)
Q Consensus 384 ~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~ 453 (477)
++.++.++++++|+.+| +++|+|+.+|++.+|...| ++.+++++|+..+|.|++|.|+++||+.++.
T Consensus 4 ls~ee~~~y~~~F~~~D-~~~G~i~~~el~~~l~~~g--l~~~~L~~Iw~~~D~~~dG~l~~~EF~~a~~ 70 (95)
T d2jxca1 4 VKPEDKAKYDAIFDSLS-PVNGFLSGDKVKPVLLNSK--LPVDILGRVWELSDIDHDGMLDRDEFAVAMF 70 (95)
T ss_dssp SCHHHHHHHHHHHHHTC-CBTTEEEHHHHHHHHTTSS--CCHHHHHHHHHHHCTTCSSEEEHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhC-CCCCceeHHHHHHHHHHcC--CCHHHHHHHHHHhcCCCCCeEcHHHHHHHHH
Confidence 67788899999999999 8999999999999998876 5788999999999999999999999987664
|
| >d1snla_ a.39.1.7 (A:) Nucleobindin 1 (CALNUC) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: EF-hand modules in multidomain proteins domain: Nucleobindin 1 (CALNUC) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.04 E-value=1e-10 Score=88.80 Aligned_cols=64 Identities=17% Similarity=0.070 Sum_probs=53.7
Q ss_pred HHHHHhhhhcCCCCCCcCHHHHHHHHHHcCCC----------------CCHHHHHHHHHHhcCCCCCcccHHHHHHHHHh
Q 042823 391 KLMEKFREMDTDNSDTLTLSELKAGLAKLGSA----------------LEESEVNQYMEAGDIDGNGNIDSIEFVNLMTD 454 (477)
Q Consensus 391 ~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~----------------~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~ 454 (477)
.++.+|+.+|.|++|+|+.+||..+++.++.. ..+..++.+++.+|.|+||.|||+||+.++.+
T Consensus 17 ~~r~~F~~~D~DgdG~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~D~d~DG~Is~~EF~~~~~~ 96 (99)
T d1snla_ 17 NPKTFFILHDINSDGVLDEQELEALFTKELEKVYDPKNEEDDMREMEEERLRMREHVMKNVDTNQDRLVTLEEFLASTQR 96 (99)
T ss_dssp CHHHHHHHHCSSCCSEEEHHHHHHHHHHHHHTTSCCSSCSSHHHHTTHHHHHHHHHHHHHTCSSCSSEEEHHHHHHHHHC
T ss_pred CHHHHHHHHCCCCCCcCCHHHHHHHHHHHHHhcchhhhhhhhhhhhHHHHHHHHHHHHHHcCCCCCCcCcHHHHHHHHhc
Confidence 36789999999999999999999999875321 12345788999999999999999999998764
|
| >d1wrka1 a.39.1.5 (A:4-85) Troponin C {Human (Homo sapiens), cardiac isoform [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Human (Homo sapiens), cardiac isoform [TaxId: 9606]
Probab=99.03 E-value=4.5e-10 Score=81.59 Aligned_cols=76 Identities=26% Similarity=0.345 Sum_probs=65.0
Q ss_pred hhhccCCchhhHHHHHHhhhcCCCC-CCCccHHHHHHHHHhhCCCCCHHHHHHHHHHhhccchHHHHHhcCChHHHHHHH
Q 042823 315 VIVEYLPDEETQALKEKFIEMDTDK-NGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNSSTLESLCENLPTKEKQKLM 393 (477)
Q Consensus 315 ~i~~~~~~~~~~~l~~~F~~~D~~~-~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l~ 393 (477)
.....+++++...++++|..+|.++ +|.|+..||..+|+.+|..+++.+ +.
T Consensus 4 ~~~~~ls~eq~~~~~~~F~~fD~d~~~G~I~~~el~~~l~~lg~~~t~~e----------------------------l~ 55 (82)
T d1wrka1 4 AAVEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEE----------------------------LQ 55 (82)
T ss_dssp HHHHHCCHHHHHHHHHHHHHHTTTCTTSSBCHHHHHHHHHHTTCCCCHHH----------------------------HH
T ss_pred HHHhhCCHHHHHHHHHHHHHHcCcCCCCeEeHHHHHHHHHHcCCCCCHHH----------------------------HH
Confidence 3456678899999999999999995 799999999999999999888744 45
Q ss_pred HHhhhhcCCCCCCcCHHHHHHHHHH
Q 042823 394 EKFREMDTDNSDTLTLSELKAGLAK 418 (477)
Q Consensus 394 ~~F~~~D~~~~G~I~~~el~~~l~~ 418 (477)
+.|+.+|.|++|.|+.+||..++..
T Consensus 56 ~~i~~~D~d~~G~I~f~eFl~im~~ 80 (82)
T d1wrka1 56 EMIDEVDEDGSGTVDFDEFLVMMVR 80 (82)
T ss_dssp HHHHTTCTTCCSSBCHHHHHHHHHH
T ss_pred HHHHHhCCCCCCeEeHHHHHHHHHh
Confidence 5566689999999999999888754
|
| >d1e8aa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), calgranulin C, s100a12 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), calgranulin C, s100a12 [TaxId: 9606]
Probab=99.03 E-value=5.8e-10 Score=81.30 Aligned_cols=68 Identities=19% Similarity=0.294 Sum_probs=57.9
Q ss_pred HHHHHHHHhhhh-cCCCCC-CcCHHHHHHHHHH-----cCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhh
Q 042823 388 EKQKLMEKFREM-DTDNSD-TLTLSELKAGLAK-----LGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDI 455 (477)
Q Consensus 388 ~~~~l~~~F~~~-D~~~~G-~I~~~el~~~l~~-----~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~ 455 (477)
.+..+..+|..| ++++++ +|+.+||+.+|+. ++...+++.++++++.+|.|+||.|+|+||+.++...
T Consensus 6 ai~~li~vF~kya~~~g~~~~Lsk~Elk~ll~~e~~~~~~~~~~~~~v~~~~~~lD~n~Dg~idF~EF~~li~~l 80 (87)
T d1e8aa_ 6 HLEGIVNIFHQYSVRKGHFDTLSKGELKQLLTKELANTIKNIKDKAVIDEIFQGLDANQDEQVDFQEFISLVAIA 80 (87)
T ss_dssp HHHHHHHHHHHHHTSSSSTTEECHHHHHHHHHHHSTTTSTTTTSHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcccCCCCCeEcHHHHHHHHHHHccccccCCCCHHHHHHHHHHHcCCCCCcCCHHHHHHHHHHH
Confidence 456788999998 566665 6999999999988 3445678899999999999999999999999998753
|
| >d2opoa1 a.39.1.10 (A:6-86) Polcalcin Che a 3 {Pigweed (Chenopodium album) [TaxId: 3559]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Polcalcin domain: Polcalcin Che a 3 species: Pigweed (Chenopodium album) [TaxId: 3559]
Probab=99.00 E-value=3.9e-10 Score=81.91 Aligned_cols=70 Identities=21% Similarity=0.311 Sum_probs=60.4
Q ss_pred CchhhHHHHHHhhhcCCCCCCCccHHHHHHHHHhhCCCCCHHHHHHHHHHhhccchHHHHHhcCChHHHHHHHHHhhhhc
Q 042823 321 PDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNSSTLESLCENLPTKEKQKLMEKFREMD 400 (477)
Q Consensus 321 ~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~F~~~D 400 (477)
++++...++++|..+|.|++|.|+..||..+|+.+| .++.. ++..+|+.+|
T Consensus 1 T~ee~~e~~~~F~~~D~d~~G~I~~~El~~~l~~lg-~~~~~----------------------------ei~~~~~~~D 51 (81)
T d2opoa1 1 TPQDIADRERIFKRFDTNGDGKISSSELGDALKTLG-SVTPD----------------------------EVRRMMAEID 51 (81)
T ss_dssp CHHHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHTTT-TCCHH----------------------------HHHHHHHHHC
T ss_pred CHHHHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHhh-cCCHH----------------------------HHHHHHHHhC
Confidence 356788999999999999999999999999999998 45553 4456677789
Q ss_pred CCCCCCcCHHHHHHHHHHc
Q 042823 401 TDNSDTLTLSELKAGLAKL 419 (477)
Q Consensus 401 ~~~~G~I~~~el~~~l~~~ 419 (477)
.|++|.|+.+||..+++..
T Consensus 52 ~d~~G~I~~~EF~~~~~~~ 70 (81)
T d2opoa1 52 TDGDGFISFDEFTDFARAN 70 (81)
T ss_dssp TTCSSEECHHHHHHHHHHC
T ss_pred CCCCCeEeHHHHHHHHHHC
Confidence 9999999999999998764
|
| >d1f54a_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=98.99 E-value=4.7e-10 Score=80.73 Aligned_cols=72 Identities=28% Similarity=0.439 Sum_probs=63.3
Q ss_pred ccCCchhhHHHHHHhhhcCCCCCCCccHHHHHHHHHhhCCCCCHHHHHHHHHHhhccchHHHHHhcCChHHHHHHHHHhh
Q 042823 318 EYLPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNSSTLESLCENLPTKEKQKLMEKFR 397 (477)
Q Consensus 318 ~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~F~ 397 (477)
..+++++...++++|..+|.+++|+|+.+||..+|+.+|..++.. ++..+|+
T Consensus 2 ~~lt~eqi~el~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~t~~----------------------------e~~~~~~ 53 (77)
T d1f54a_ 2 SNLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEA----------------------------EVNDLMN 53 (77)
T ss_dssp CCCCHHHHHHHHHHHHHTCTTCSSEEEHHHHHHHHHHHTCCCCHH----------------------------HHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHcCCCCCeEChHHHHHHHHHhCCCCCHH----------------------------HHHHHHH
Confidence 356788899999999999999999999999999999999988864 4455677
Q ss_pred hhcCCCCCCcCHHHHHHHHH
Q 042823 398 EMDTDNSDTLTLSELKAGLA 417 (477)
Q Consensus 398 ~~D~~~~G~I~~~el~~~l~ 417 (477)
.+|.+++|.|+.+||..++.
T Consensus 54 ~~D~~~~g~I~~~eF~~~m~ 73 (77)
T d1f54a_ 54 EIDVDGNHQIEFSEFLALMS 73 (77)
T ss_dssp TTCCSSCCEEEHHHHHHHHT
T ss_pred HhCCCCCCeEeHHHHHHHHH
Confidence 78999999999999988774
|
| >d1avsa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=98.99 E-value=4.9e-10 Score=81.33 Aligned_cols=73 Identities=26% Similarity=0.378 Sum_probs=63.0
Q ss_pred ccCCchhhHHHHHHhhhcCCCCCCCccHHHHHHHHHhhCCCCCHHHHHHHHHHhhccchHHHHHhcCChHHHHHHHHHhh
Q 042823 318 EYLPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNSSTLESLCENLPTKEKQKLMEKFR 397 (477)
Q Consensus 318 ~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~F~ 397 (477)
..+++++...++++|..+|.+++|+|+..||..+|+.+|..+++.+ +.++|+
T Consensus 6 ~~Lt~~~i~el~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~s~~e----------------------------~~~~~~ 57 (81)
T d1avsa_ 6 AFLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEE----------------------------LDAIIE 57 (81)
T ss_dssp HHBCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHH----------------------------HHHHHH
T ss_pred ccCCHHHHHHHHHHHHHHcCCCCCeEchhHHHHHHHHcCCCCCHHH----------------------------HHHHHH
Confidence 3457788889999999999999999999999999999999887644 445567
Q ss_pred hhcCCCCCCcCHHHHHHHHHH
Q 042823 398 EMDTDNSDTLTLSELKAGLAK 418 (477)
Q Consensus 398 ~~D~~~~G~I~~~el~~~l~~ 418 (477)
.+|.|++|.|+.+||..+|..
T Consensus 58 ~~D~d~~g~I~~~eF~~~m~~ 78 (81)
T d1avsa_ 58 EVDEDGSGTIDFEEFLVMMVR 78 (81)
T ss_dssp HHCTTCCSSEEHHHHHHHHHH
T ss_pred HhCCCCCCeEeHHHHHHHHHH
Confidence 789999999999999988753
|
| >d1iq3a_ a.39.1.6 (A:) Pob1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Eps15 homology domain (EH domain) domain: Pob1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.98 E-value=8.2e-11 Score=90.72 Aligned_cols=69 Identities=22% Similarity=0.305 Sum_probs=62.5
Q ss_pred cCChHHHHHHHHHhhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHH
Q 042823 383 NLPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMT 453 (477)
Q Consensus 383 ~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~ 453 (477)
.++.++++.+.++|+.+|+|++|+|+.+|++.+|.+.| ++++++.+|++.+|.|++|.|+++||+.+|.
T Consensus 15 ~lt~ee~~~y~~lF~~~D~d~~G~Is~~e~~~~l~~s~--L~~~~L~~Iw~l~D~d~dG~l~~~EF~~am~ 83 (110)
T d1iq3a_ 15 RITEEQREYYVNQFRSLQPDPSSFISGSVAKNFFTKSK--LSIPELSYIWELSDADCDGALTLPEFCAAFH 83 (110)
T ss_dssp CCSSSSHHHHHHHHHHHCCSSSSEEEHHHHHHHCCSSS--CSSCCHHHHHHHHCSSSCSEEEHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHHhCCCcccchhHHHHHHHHHhhc--cchHHHHHHHHHhccCCCCeECHHHHHHHHH
Confidence 46778889999999999999999999999999998776 5667899999999999999999999998775
|
| >d2pq3a1 a.39.1.5 (A:3-75) Calmodulin {Rattus norvegicus [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Rattus norvegicus [TaxId: 10116]
Probab=98.97 E-value=4.2e-10 Score=80.02 Aligned_cols=70 Identities=30% Similarity=0.466 Sum_probs=61.9
Q ss_pred CCchhhHHHHHHhhhcCCCCCCCccHHHHHHHHHhhCCCCCHHHHHHHHHHhhccchHHHHHhcCChHHHHHHHHHhhhh
Q 042823 320 LPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNSSTLESLCENLPTKEKQKLMEKFREM 399 (477)
Q Consensus 320 ~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~F~~~ 399 (477)
+++++...++++|..+|.+++|.|+..||..+++.+|..+++. .+..+|+.+
T Consensus 2 Ls~eei~el~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~s~~----------------------------~~~~~~~~~ 53 (73)
T d2pq3a1 2 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEA----------------------------ELQDMINEV 53 (73)
T ss_dssp CCHHHHHHHHHHHHHTCTTSSSEEEGGGHHHHHHHTTCCCCHH----------------------------HHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHHcCCCCceEeHHHHHHHHHHhCCCCCHH----------------------------HHHHHHHHh
Confidence 5678889999999999999999999999999999999888764 445667778
Q ss_pred cCCCCCCcCHHHHHHHHH
Q 042823 400 DTDNSDTLTLSELKAGLA 417 (477)
Q Consensus 400 D~~~~G~I~~~el~~~l~ 417 (477)
|.|++|.|+.+||..+|.
T Consensus 54 D~d~~g~I~f~eF~~~m~ 71 (73)
T d2pq3a1 54 DADGNGTIDFPEFLTMMA 71 (73)
T ss_dssp CTTCSSEEEHHHHHHHHH
T ss_pred CCCCCCeEeHHHHHHHHh
Confidence 999999999999988875
|
| >d1tiza_ a.39.1.5 (A:) Calmodulin-related protein T21P5.17 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin-related protein T21P5.17 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=98.97 E-value=5.5e-10 Score=77.89 Aligned_cols=64 Identities=28% Similarity=0.466 Sum_probs=56.4
Q ss_pred HHHHhhhcCCCCCCCccHHHHHHHHHhhCCCCCHHHHHHHHHHhhccchHHHHHhcCChHHHHHHHHHhhhhcCCCCCCc
Q 042823 328 LKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNSSTLESLCENLPTKEKQKLMEKFREMDTDNSDTL 407 (477)
Q Consensus 328 l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~F~~~D~~~~G~I 407 (477)
.+++|..+|.+++|+|+.+||..+++.+|..+++. ++..+|+.+|.|++|.|
T Consensus 3 ~r~~F~~~D~d~~G~I~~~El~~~l~~lg~~~~~~----------------------------~i~~~~~~~D~d~dg~I 54 (67)
T d1tiza_ 3 AKRVFEKFDKNKDGKLSLDEFREVALAFSPYFTQE----------------------------DIVKFFEEIDVDGNGEL 54 (67)
T ss_dssp HHHHHHHHCTTSSSCEEHHHHHHHHHHTCTTSCHH----------------------------HHHHHHHHHCCSSSSEE
T ss_pred HHHHHHHHCCCCcCcCcHHHHHHHHHHhccccchH----------------------------HHHHHHHHhCCCCCCeE
Confidence 57899999999999999999999999999877753 45667888999999999
Q ss_pred CHHHHHHHHHHc
Q 042823 408 TLSELKAGLAKL 419 (477)
Q Consensus 408 ~~~el~~~l~~~ 419 (477)
+.+||..++..+
T Consensus 55 ~~~EF~~~m~~~ 66 (67)
T d1tiza_ 55 NADEFTSCIEKM 66 (67)
T ss_dssp CHHHHHHHHHTC
T ss_pred eHHHHHHHHHHh
Confidence 999999988753
|
| >d1qv0a_ a.39.1.5 (A:) Calcium-regulated photoprotein {Hydrozoa (Obelia longissima), obelin [TaxId: 32570]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium-regulated photoprotein species: Hydrozoa (Obelia longissima), obelin [TaxId: 32570]
Probab=98.97 E-value=9.7e-10 Score=94.28 Aligned_cols=50 Identities=20% Similarity=0.108 Sum_probs=36.8
Q ss_pred HHHHHHHhcCCCCCcccHHHHHHHHHhhhCCCcHHHHHHHHHHhccCCCC
Q 042823 428 VNQYMEAGDIDGNGNIDSIEFVNLMTDIYKLETPELLEKAFQYLDKNSDQ 477 (477)
Q Consensus 428 i~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~l~~aF~~~D~d~~G 477 (477)
+..+++.+|.+++|.|+.+||..++.......+++++..+|+.+|.|+||
T Consensus 109 ~~~~F~~~D~d~~G~is~~E~~~~l~~~g~~~~~~~~~~lf~~~D~d~dG 158 (189)
T d1qv0a_ 109 GDAVFDIFDKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDNAG 158 (189)
T ss_dssp HHHHHHHTC----CEECHHHHHHHHHHHSSCCCHHHHHHHHHHSCCCTTS
T ss_pred HHHHHHHHccCCCCcccchhhHHHHHhcCCCCCHHHHHHHHHHhCCCCCC
Confidence 44567778888888888888888887766667778888888888888887
|
| >d1psra_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), psoriasin s100a7 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), psoriasin s100a7 [TaxId: 9606]
Probab=98.97 E-value=1.7e-10 Score=87.35 Aligned_cols=66 Identities=17% Similarity=0.230 Sum_probs=56.2
Q ss_pred HHHHHHHHhhhhcCCCCCCcCHHHHHHHHHHcCC-------CCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHh
Q 042823 388 EKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGS-------ALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTD 454 (477)
Q Consensus 388 ~~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~-------~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~ 454 (477)
.+..+..+|..|| +++|.|+..||+.+|+..+. ..++..++.+++.+|.|+||.|+|+||+.++..
T Consensus 8 ~i~~l~~~F~~y~-~~dG~i~~~El~~ll~~~~~~~~~~~~~~~~~~v~~~~~~~D~n~DG~I~F~EF~~li~~ 80 (100)
T d1psra_ 8 SIIGMIDMFHKYT-RRDDKIDKPSLLTMMKENFPNFLSACDKKGTNYLADVFEKKDKNEDKKIDFSEFLSLLGD 80 (100)
T ss_dssp HHHHHHHHHHHTC-CTTSCBCHHHHHHHHHHHCHHHHHHHHHTTCCGGGTHHHHHCTTCSSCBCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHc-CCCCcccHHHHHHHHHHHccccccccccCCHHHHHHHHHHhcCCCCCcCcHHHHHHHHHH
Confidence 4567778888887 78999999999999998653 235567999999999999999999999999975
|
| >d1uhka1 a.39.1.5 (A:3-189) Calcium-regulated photoprotein {Jellyfish (Aequorea aequorea), aequorin [TaxId: 168712]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium-regulated photoprotein species: Jellyfish (Aequorea aequorea), aequorin [TaxId: 168712]
Probab=98.96 E-value=1.2e-09 Score=93.58 Aligned_cols=92 Identities=18% Similarity=0.250 Sum_probs=70.1
Q ss_pred hHHHHHHHHHhhhhcCCCCCCcCHHHHHHHHHH-----cCCCCCHHH---------------------------------
Q 042823 386 TKEKQKLMEKFREMDTDNSDTLTLSELKAGLAK-----LGSALEESE--------------------------------- 427 (477)
Q Consensus 386 ~~~~~~l~~~F~~~D~~~~G~I~~~el~~~l~~-----~g~~~~~~~--------------------------------- 427 (477)
+..+++++++|+.+|.|++|+|+.+||..++.. +|..++..+
T Consensus 8 p~~~~~~k~~F~~~D~d~dG~Is~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (187)
T d1uhka1 8 PRWIGRHKHMFNFLDVNHNGKISLDEMVYKASDIVINNLGATPEQAKRHKDAVEAFFGGAGMKYGVETDWPAYIEGWKKL 87 (187)
T ss_dssp HHHHHHHHHHHHHHCTTCCSEEEHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHTTCCTTCEEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHHHHHHhccCccHHHHHHHHHHhhhhcccccccccccHHHHHHHHHHH
Confidence 345678899999999999999999999765432 333332221
Q ss_pred -------------------HHHHHHHhcCCCCCcccHHHHHHHHHhhhCCCcHHHHHHHHHHhccCCCC
Q 042823 428 -------------------VNQYMEAGDIDGNGNIDSIEFVNLMTDIYKLETPELLEKAFQYLDKNSDQ 477 (477)
Q Consensus 428 -------------------i~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~l~~aF~~~D~d~~G 477 (477)
+..+++.+|.+++|.|+.+||..++.......+.+++..+|+.+|.|+||
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~El~~~l~~~g~~~~~~~~~~lf~~~D~d~dG 156 (187)
T d1uhka1 88 ATDELEKYAKNEPTLIRIWGDALFDIVDKDQNGAITLDEWKAYTKAAGIIQSSEDCEETFRVCDIDESG 156 (187)
T ss_dssp HHHHHHHHHTTCCCHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHTSCCSHHHHHHHHHHSCCCTTS
T ss_pred HHHHHHhhhhhhHHHHHHHHHHHHHHHccCCCcccchHHHHHHHHHhCCCccHHHHHHHHHHhCCCCCC
Confidence 34456677999999999999998888766667788899999999999988
|
| >d1ij5a_ a.39.1.9 (A:) Cbp40 (plasmodial specific CaII-binding protein LAV1-2) {Physarum polycephalum [TaxId: 5791]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Cbp40 (plasmodial specific CaII-binding protein LAV1-2) domain: Cbp40 (plasmodial specific CaII-binding protein LAV1-2) species: Physarum polycephalum [TaxId: 5791]
Probab=98.95 E-value=8.4e-11 Score=110.05 Aligned_cols=91 Identities=22% Similarity=0.325 Sum_probs=78.1
Q ss_pred HhcCChHHHHHHHHHhhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhhhCCCc
Q 042823 381 CENLPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIYKLET 460 (477)
Q Consensus 381 ~~~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~~~ 460 (477)
...++.++...++++|..+|.|++|.|+.+||+.+|+.+|..++++++..++..+|.+++|.|+|.||+..+....
T Consensus 113 ~~~l~~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~---- 188 (321)
T d1ij5a_ 113 KPMLSEEDTNILRQLFLSSAVSGSGKFSFQDLKQVLAKYADTIPEGPLKKLFVMVENDTKGRMSYITLVAVANDLA---- 188 (321)
T ss_dssp CCCCCHHHHHHHHHHHTSSSSTTSSCCCHHHHHHHHHHHHTTSCSSHHHHHHHHHHHCCSSTHHHHHHTTSHHHHH----
T ss_pred cccCCHHHHHHHHHHHHHHcCCCCCeEcHHHHHHHHHHcCCcccHHHHHHHHHHHhhcCCccccchhhhhhhhhhh----
Confidence 3456778888999999999999999999999999999999999999999999999999999999999998775432
Q ss_pred HHHHHHHHHHhccCCCC
Q 042823 461 PELLEKAFQYLDKNSDQ 477 (477)
Q Consensus 461 ~~~l~~aF~~~D~d~~G 477 (477)
.+..+|+.+|.+++|
T Consensus 189 --~~~~~F~~~d~d~~~ 203 (321)
T d1ij5a_ 189 --ALVADFRKIDTNSNG 203 (321)
T ss_dssp --TSCCCHHHHCTTCCS
T ss_pred --hhhHHHHHHhhcccc
Confidence 233467777777765
|
| >d1xo5a_ a.39.1.5 (A:) Calcium- and integrin-binding protein, CIB {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium- and integrin-binding protein, CIB species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.94 E-value=1.7e-09 Score=91.84 Aligned_cols=136 Identities=15% Similarity=0.192 Sum_probs=93.9
Q ss_pred ccCCchhhHHHHHHhhhcCCCCCCCccHHHHHHHHHhhCCCCCHHHHHHHHHHhhccchHHHHHhcCChHHHHHHHHHhh
Q 042823 318 EYLPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNSSTLESLCENLPTKEKQKLMEKFR 397 (477)
Q Consensus 318 ~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~F~ 397 (477)
..++.++...+.+.|..++.+++|.++...... .+-.++..+. ..... .-..++|+
T Consensus 9 T~ft~~EI~~l~~~F~~l~~~~~~~~~~~~~~~--------i~~~e~~~~~----------~l~~~------~~~~rif~ 64 (180)
T d1xo5a_ 9 TFLTKQEILLAHRRFCELLPQEQRSVESSLRAQ--------VPFEQILSLP----------ELKAN------PFKERICR 64 (180)
T ss_dssp CCSCHHHHHHHHHHHHTTSCGGGCSHHHHHHCC--------EEHHHHHTSH----------HHHTC------TTHHHHHH
T ss_pred cCCCHHHHHHHHHHHHHHCcCccccccccccce--------EcHHHHhcCc----------ccccC------hHHHHHHH
Confidence 456788899999999999988888655433211 0001110000 00000 01346788
Q ss_pred hhcCC-CCCCcCHHHHHHHHHHcC-CCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhhhC-----CCc----HHHHHH
Q 042823 398 EMDTD-NSDTLTLSELKAGLAKLG-SALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIYK-----LET----PELLEK 466 (477)
Q Consensus 398 ~~D~~-~~G~I~~~el~~~l~~~g-~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~~~-----~~~----~~~l~~ 466 (477)
.||.+ ++|.|+.+||..+|..+. ....++.++.+++.+|.|++|.|+.+|+..++..... ..+ ++-+..
T Consensus 65 ~fd~~~~~g~I~f~EFv~~l~~~~~~~~~~~kl~~~F~~~D~d~~G~I~~~el~~~l~~~~~~~~~~~~~~~~~~~~v~~ 144 (180)
T d1xo5a_ 65 VFSTSPAKDSLSFEDFLDLLSVFSDTATPDIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDN 144 (180)
T ss_dssp HHCCSTTCCEECHHHHHHHHHHHSTTSCHHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHC------CCCCTTHHHHHHH
T ss_pred hccCCCCCCcCcHHHHHHHHHHHhhcCCHHHHHHHhhccccCCCCCeeeHHHHHHHHHHHHhccccccccHHHHHHHHHH
Confidence 99987 699999999999997764 4455778999999999999999999999998875421 111 123556
Q ss_pred HHHHhccCCCC
Q 042823 467 AFQYLDKNSDQ 477 (477)
Q Consensus 467 aF~~~D~d~~G 477 (477)
+|+.+|.|+||
T Consensus 145 ~~~~~D~d~dG 155 (180)
T d1xo5a_ 145 ILEESDIDRDG 155 (180)
T ss_dssp HHHHHCTTCSS
T ss_pred HHHHhCCCCCC
Confidence 89999999998
|
| >d2zkmx1 a.39.1.7 (X:142-311) Phospholipase C-beta-2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: EF-hand modules in multidomain proteins domain: Phospholipase C-beta-2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.93 E-value=4.2e-11 Score=100.92 Aligned_cols=121 Identities=9% Similarity=0.045 Sum_probs=71.3
Q ss_pred cCCCCCCCccHHHHHHHHHhhCCCC--CHHHHHHHHHHhhcc----chHHHHHhcCCh-HHHHHHHHHhhhhcCCCCCCc
Q 042823 335 MDTDKNGTLSYDELRAGLTKVGSML--TEFDVKHLMEAVKNS----STLESLCENLPT-KEKQKLMEKFREMDTDNSDTL 407 (477)
Q Consensus 335 ~D~~~~G~i~~~el~~~l~~~~~~~--~~~~~~~~~~~~d~~----~~~~~~~~~~~~-~~~~~l~~~F~~~D~~~~G~I 407 (477)
+|.|++|.|+.+||.+++...+... ....+..++...|.. .+|++|...+.. ....++..+|..+|.|++|+|
T Consensus 16 ~d~n~dG~Is~~el~k~l~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~F~eF~~~~~~l~~r~ei~~~F~~~d~d~~~~i 95 (170)
T d2zkmx1 16 MQLNSEGKIPVKNFFQMFPADRKRVEAALSACHLPKGKNDAINPEDFPEPVYKSFLMSLCPRPEIDEIFTSYHAKAKPYM 95 (170)
T ss_dssp HSCCTTSCEEHHHHHHHSCSCHHHHHHHHHHTTCCCCTTCEECGGGCCHHHHHHHHHHHSCCHHHHTTCC--------CC
T ss_pred cccCCCCCCcHHHHHHHHHHhhhhHHHHHHHHhhhhccccccCCCccCHHHHHHHHhccCCHHHHHHHHHHHcCCCCCcc
Confidence 7999999999999998886553211 111222223333322 245655443211 112468899999999999999
Q ss_pred CHHHHHHHHHHcCCC----------CCHHHHHHHHHHhcCCCC----CcccHHHHHHHHHhh
Q 042823 408 TLSELKAGLAKLGSA----------LEESEVNQYMEAGDIDGN----GNIDSIEFVNLMTDI 455 (477)
Q Consensus 408 ~~~el~~~l~~~g~~----------~~~~~i~~~~~~~d~~~~----g~i~~~eF~~~~~~~ 455 (477)
|.+||...|...... .+.+.+.+++..++.+.+ |.|++++|+.++...
T Consensus 96 t~~el~~fL~~~Q~~~~~~e~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ls~d~F~~fL~S~ 157 (170)
T d2zkmx1 96 TKEHLTKFINQKQRDSRLNSLLFPPARPDQVQGLIDKYEPSGINAQRGQLSPEGMVWFLCGP 157 (170)
T ss_dssp CHHHHHHHHHHTCC---------------CHHHHHHHHCCC--------CCHHHHHHHHHST
T ss_pred cHHHHHHHHHHHhcchhhhhhccccCCHHHHHHHHHHHccccccccCCeECHHHHHHHHcCc
Confidence 999999999876433 467788999999887644 889999999988653
|
| >d1fi5a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]
Probab=98.91 E-value=7.4e-10 Score=80.39 Aligned_cols=67 Identities=22% Similarity=0.374 Sum_probs=57.9
Q ss_pred hhHHHHHHhhhcCCCCCCCccHHHHHHHHHhhCCCCCHHHHHHHHHHhhccchHHHHHhcCChHHHHHHHHHhhhhcCCC
Q 042823 324 ETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNSSTLESLCENLPTKEKQKLMEKFREMDTDN 403 (477)
Q Consensus 324 ~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~F~~~D~~~ 403 (477)
....++++|..+|.+++|+|+..||..+++.+|..+++.++ ..+|+.+|.|+
T Consensus 13 ~ee~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~ev----------------------------~~~~~~~D~d~ 64 (81)
T d1fi5a_ 13 TEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDI----------------------------EELMKDGDKNN 64 (81)
T ss_dssp CHHHHHHHHHHHCSSCSSEECHHHHHHHHHTSSSCCCHHHH----------------------------HHHHHHHCSSS
T ss_pred CHHHHHHHHHHHcCCCCCcccHHHHHHHHHhcCCCCCHHHH----------------------------HHHHHHHCCCC
Confidence 34578999999999999999999999999999988877444 45566789999
Q ss_pred CCCcCHHHHHHHHHH
Q 042823 404 SDTLTLSELKAGLAK 418 (477)
Q Consensus 404 ~G~I~~~el~~~l~~ 418 (477)
+|.|+.+||..+++.
T Consensus 65 dg~I~~~EF~~~m~~ 79 (81)
T d1fi5a_ 65 DGRIDYDEFLEFMKG 79 (81)
T ss_dssp SSSEEHHHHHHHHSC
T ss_pred CCcEeHHHHHHHHHh
Confidence 999999999998864
|
| >d1jc2a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=98.89 E-value=1.8e-09 Score=76.99 Aligned_cols=68 Identities=19% Similarity=0.340 Sum_probs=58.4
Q ss_pred hhHHHHHHhhhcCCCCCCCccHHHHHHHHHhhCCCCCHHHHHHHHHHhhccchHHHHHhcCChHHHHHHHHHhhhhcCCC
Q 042823 324 ETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNSSTLESLCENLPTKEKQKLMEKFREMDTDN 403 (477)
Q Consensus 324 ~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~F~~~D~~~ 403 (477)
....+..+|..+|.+++|+|+..||..+|+.+|..++..++ ..+|+.+|.|+
T Consensus 7 ~eeel~~~F~~fD~~~~G~I~~~el~~~l~~lg~~~~~~e~----------------------------~~~~~~~D~d~ 58 (75)
T d1jc2a_ 7 SEEELANCFRIFDKNADGFIDIEELGEILRATGEHVIEEDI----------------------------EDLMKDSDKNN 58 (75)
T ss_dssp CHHHHHHHHHHHCCSTTSSEEHHHHHHHHHHSSSCCCHHHH----------------------------HHHHHHHCSSS
T ss_pred cHHHHHHHHHHHcCCCcCeEcHHHHHHHHHhcCCCccHHHH----------------------------HHHHHHhCCCC
Confidence 34578999999999999999999999999999998887544 44566689999
Q ss_pred CCCcCHHHHHHHHHHc
Q 042823 404 SDTLTLSELKAGLAKL 419 (477)
Q Consensus 404 ~G~I~~~el~~~l~~~ 419 (477)
+|.|+.+||..+|..+
T Consensus 59 dg~I~~~EF~~~m~~~ 74 (75)
T d1jc2a_ 59 DGRIDFDEFLKMMEGV 74 (75)
T ss_dssp CSEECHHHHHHHHHTC
T ss_pred CCcEeHHHHHHHHHhC
Confidence 9999999999988654
|
| >d1s6ja_ a.39.1.5 (A:) Calcium-dependent protein kinase sk5 CLD {Soybean (Glycine max) [TaxId: 3847]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium-dependent protein kinase sk5 CLD species: Soybean (Glycine max) [TaxId: 3847]
Probab=98.89 E-value=2.4e-10 Score=84.21 Aligned_cols=73 Identities=40% Similarity=0.611 Sum_probs=62.5
Q ss_pred hhhccCCchhhHHHHHHhhhcCCCCCCCccHHHHHHHHHhhCCCCCHHHHHHHHHHhhccchHHHHHhcCChHHHHHHHH
Q 042823 315 VIVEYLPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNSSTLESLCENLPTKEKQKLME 394 (477)
Q Consensus 315 ~i~~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~ 394 (477)
.+...++.++...++++|..+|.+++|.|+..||..+|+.+|..+++.+ +.+
T Consensus 12 ~ma~~l~~~~i~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~s~~e----------------------------~~~ 63 (87)
T d1s6ja_ 12 HMAERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESE----------------------------IKD 63 (87)
T ss_dssp HSSSSSCSSSTTTTTTHHHHHCTTCSSCEEHHHHHHHHHTTTSSCCHHH----------------------------HHH
T ss_pred HHHhhCCHHHHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHcCCCCCHHH----------------------------HHH
Confidence 4566778888888999999999999999999999999999999888744 455
Q ss_pred HhhhhcCCCCCCcCHHHHHHH
Q 042823 395 KFREMDTDNSDTLTLSELKAG 415 (477)
Q Consensus 395 ~F~~~D~~~~G~I~~~el~~~ 415 (477)
+|+.+|.|++|.|+.+||..+
T Consensus 64 l~~~~D~d~~g~I~~~EFl~a 84 (87)
T d1s6ja_ 64 LMDAADIDKSGTIDYGEFIAA 84 (87)
T ss_dssp HHHHHCTTCSSEECHHHHTTC
T ss_pred HHHHcCCCCCCeEeHHHHHHH
Confidence 567789999999999998654
|
| >d1fw4a_ a.39.1.5 (A:) Calmodulin {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Cow (Bos taurus) [TaxId: 9913]
Probab=98.89 E-value=1.5e-09 Score=75.05 Aligned_cols=63 Identities=32% Similarity=0.461 Sum_probs=55.1
Q ss_pred HHHHHHhhhcCCCCCCCccHHHHHHHHHhhCCCCCHHHHHHHHHHhhccchHHHHHhcCChHHHHHHHHHhhhhcCCCCC
Q 042823 326 QALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNSSTLESLCENLPTKEKQKLMEKFREMDTDNSD 405 (477)
Q Consensus 326 ~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~F~~~D~~~~G 405 (477)
+.++++|..+|.+++|+|+.+||+.+++.+|..+++. ++..+|+.+|.|++|
T Consensus 3 eel~~aF~~fD~d~~G~I~~~el~~~l~~lg~~~~~~----------------------------e~~~l~~~~D~d~~g 54 (65)
T d1fw4a_ 3 EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE----------------------------EVDEMIREADIDGDG 54 (65)
T ss_dssp HHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHH----------------------------HHHHHHHTTCTTCSS
T ss_pred HHHHHHHHHHcCCCCCcCCHHHHHHHHHHhCCCCCHH----------------------------HHHHHHHHcCCCCCC
Confidence 4688999999999999999999999999999888764 445667778999999
Q ss_pred CcCHHHHHHHH
Q 042823 406 TLTLSELKAGL 416 (477)
Q Consensus 406 ~I~~~el~~~l 416 (477)
.|+.+||..+|
T Consensus 55 ~I~~~eF~~~m 65 (65)
T d1fw4a_ 55 QVNYEEFVQMM 65 (65)
T ss_dssp SEEHHHHHHHC
T ss_pred cEeHHHHHHHC
Confidence 99999998753
|
| >d1qjta_ a.39.1.6 (A:) Eps15 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Eps15 homology domain (EH domain) domain: Eps15 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=98.88 E-value=1.3e-09 Score=82.20 Aligned_cols=62 Identities=21% Similarity=0.310 Sum_probs=57.1
Q ss_pred HHHHHhhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHh
Q 042823 391 KLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTD 454 (477)
Q Consensus 391 ~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~ 454 (477)
.+.++|+.+|+|++|+|+.+|++.+|+..| ++.+++.++++.+|.|++|.|+++||+.+|.-
T Consensus 12 ~y~~~F~~~D~d~~G~i~~~e~~~~l~~s~--L~~~~L~~i~~~~D~d~dG~L~~~EF~~am~L 73 (99)
T d1qjta_ 12 VYEKYYRQVEAGNTGRVLALDAAAFLKKSG--LPDLILGKIWDLADTDGKGVLSKQEFFVALRL 73 (99)
T ss_dssp HHHHHHHHHCCTTSSCCCSHHHHHHHHTSS--SCHHHHHHHHHHHCCSSSSSCCSHHHHHHHHH
T ss_pred HHHHHHHHHCCCCCCcccHHHHHHHHHHcC--CcHHHHHHHHHHHcCCCCCccCHHHHHHHHHH
Confidence 566889999999999999999999999876 67999999999999999999999999988763
|
| >d2hf5a1 a.39.1.5 (A:81-113) Troponin C {Human (Homo sapiens), cardiac isoform [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Human (Homo sapiens), cardiac isoform [TaxId: 9606]
Probab=98.88 E-value=4.7e-10 Score=64.22 Aligned_cols=31 Identities=29% Similarity=0.568 Sum_probs=29.3
Q ss_pred HHHHHHhhhhcCCCCCCcCHHHHHHHHHHcC
Q 042823 390 QKLMEKFREMDTDNSDTLTLSELKAGLAKLG 420 (477)
Q Consensus 390 ~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g 420 (477)
+++++||+.||+|++|+|+..||+.+|+.+|
T Consensus 3 eel~eAF~~FDkDg~G~Is~~EL~~vm~~lG 33 (33)
T d2hf5a1 3 EEIREAFRVFDKDGNGYISAAELRHVMTNLG 33 (33)
T ss_dssp HHHHHHHHHHSSSCCSCBCHHHHHHHTTSCC
T ss_pred HHHHHHHHHhCCCCCCcCcHHHHHHHHHHcC
Confidence 5899999999999999999999999998876
|
| >d1oqpa_ a.39.1.5 (A:) Caltractin (centrin 2) {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Caltractin (centrin 2) species: Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]
Probab=98.87 E-value=3.4e-09 Score=76.08 Aligned_cols=69 Identities=25% Similarity=0.379 Sum_probs=59.6
Q ss_pred hhhHHHHHHhhhcCCCCCCCccHHHHHHHHHhhCCCCCHHHHHHHHHHhhccchHHHHHhcCChHHHHHHHHHhhhhcCC
Q 042823 323 EETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNSSTLESLCENLPTKEKQKLMEKFREMDTD 402 (477)
Q Consensus 323 ~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~F~~~D~~ 402 (477)
+..+.++++|..+|.+++|+|+..||..+|+.+|..++.. ++..+|+.+|.|
T Consensus 6 d~~e~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~----------------------------e~~~~~~~~D~d 57 (77)
T d1oqpa_ 6 DSREEILKAFRLFDDDNSGTITIKDLRRVAKELGENLTEE----------------------------ELQEMIAEADRN 57 (77)
T ss_dssp SHHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHHTCCCCHH----------------------------HHHHHHHHHCCS
T ss_pred cHHHHHHHHHHHHcCCCCCEechHHHHHHHHHhCCCCCHH----------------------------HHHHHHHHhCCC
Confidence 3456789999999999999999999999999999887764 445567778999
Q ss_pred CCCCcCHHHHHHHHHHc
Q 042823 403 NSDTLTLSELKAGLAKL 419 (477)
Q Consensus 403 ~~G~I~~~el~~~l~~~ 419 (477)
++|.|+.+||..+|+..
T Consensus 58 ~~G~I~~~EF~~~m~k~ 74 (77)
T d1oqpa_ 58 DDNEIDEDEFIRIMKKT 74 (77)
T ss_dssp SSSEECHHHHHHHHHHT
T ss_pred CCCcEeHHHHHHHHHcc
Confidence 99999999999998764
|
| >d2sasa_ a.39.1.5 (A:) Sarcoplasmic calcium-binding protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Sarcoplasmic calcium-binding protein species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]
Probab=98.85 E-value=1.4e-09 Score=92.85 Aligned_cols=94 Identities=15% Similarity=0.224 Sum_probs=72.4
Q ss_pred CChHHHHHHHHHhhh-hcCCCCCCcCHHHHHHHHHHcCC----CCCH-----------HHHHHHHHHhcCCCCCcccHHH
Q 042823 384 LPTKEKQKLMEKFRE-MDTDNSDTLTLSELKAGLAKLGS----ALEE-----------SEVNQYMEAGDIDGNGNIDSIE 447 (477)
Q Consensus 384 ~~~~~~~~l~~~F~~-~D~~~~G~I~~~el~~~l~~~g~----~~~~-----------~~i~~~~~~~d~~~~g~i~~~e 447 (477)
|++.+..+++.+|+. +|.|++|.|+.+||..++..++. .... .....+....|.+++|.|++++
T Consensus 2 lt~~q~~~i~~~F~~~~D~d~dG~Is~~Ef~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~i~~~~ 81 (185)
T d2sasa_ 2 LNDFQKQKIKFTFDFFLDMNHDGSIQDNDFEDMMTRYKEVNKGSLSDADYKSMQASLEDEWRDLKGRADINKDDVVSWEE 81 (185)
T ss_dssp CCHHHHHHHHHHHHHHTCTTCSSEECHHHHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHHHCTTCSSCEEHHH
T ss_pred cCHHHHHHHHHHHHHhhcCCCCCcCCHHHHHHHHHHhccccCCCcccHHHHHHHHHHHHHHHHHHHHhCcCCCCcEeeeH
Confidence 567788899999997 59999999999999999877531 1111 1234556778999999999999
Q ss_pred HHHHHHhhhC---------CCcHHHHHHHHHHhccCCCC
Q 042823 448 FVNLMTDIYK---------LETPELLEKAFQYLDKNSDQ 477 (477)
Q Consensus 448 F~~~~~~~~~---------~~~~~~l~~aF~~~D~d~~G 477 (477)
|..++..... ......+..+|+.+|+|++|
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G 120 (185)
T d2sasa_ 82 YLAMWEKTIATCKSVADLPAWCQNRIPFLFKGMDVSGDG 120 (185)
T ss_dssp HHHHHHHHHHTCCSGGGSCTTHHHHHHHHHHHHCTTSSS
T ss_pred hhHHHHHHhhhhhhhhhhhHHHHHHHHHHHHHHccCCCc
Confidence 9998864322 11235688999999999998
|
| >d2scpa_ a.39.1.5 (A:) Sarcoplasmic calcium-binding protein {Sandworm (Nereis diversicolor) [TaxId: 126592]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Sarcoplasmic calcium-binding protein species: Sandworm (Nereis diversicolor) [TaxId: 126592]
Probab=98.84 E-value=3.6e-09 Score=89.29 Aligned_cols=92 Identities=21% Similarity=0.312 Sum_probs=67.1
Q ss_pred hHHHHHHHHHhhhhcCCCCCCcCHHHHHHHHHHcC--CCCCHHHHHH-------HHHH--hcCCCCCcccHHHHHHHHHh
Q 042823 386 TKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLG--SALEESEVNQ-------YMEA--GDIDGNGNIDSIEFVNLMTD 454 (477)
Q Consensus 386 ~~~~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g--~~~~~~~i~~-------~~~~--~d~~~~g~i~~~eF~~~~~~ 454 (477)
+...++++.+|+.+|.|++|+|+.+||..++..++ .......... .+.. .+.+++|.|+++||+..+..
T Consensus 2 ~~~~~~l~~~F~~~D~d~dG~Is~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ef~~~~~~ 81 (174)
T d2scpa_ 2 DLWVQKMKTYFNRIDFDKDGAITRMDFESMAERFAKESEMKAEHAKVLMDSLTGVWDNFLTAVAGGKGIDETTFINSMKE 81 (174)
T ss_dssp HHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHHHHSCCCTTHHHHHHHHHHHHHHHTGGGTTTTSCEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHccCCCCcEeHHHHHHHHHHHhccccchhHHHHHhHHhhhhhccccccccCCCCcCcHHHHHHHHHh
Confidence 34578999999999999999999999999987653 1111112222 2222 36788999999999999876
Q ss_pred hhCCC-----cHHHHHHHHHHhccCCCC
Q 042823 455 IYKLE-----TPELLEKAFQYLDKNSDQ 477 (477)
Q Consensus 455 ~~~~~-----~~~~l~~aF~~~D~d~~G 477 (477)
..... ..+.+..+|+.+|+||||
T Consensus 82 ~~~~~~~~~~~~~~~~~~F~~~D~d~dG 109 (174)
T d2scpa_ 82 MVKNPEAKSVVEGPLPLFFRAVDTNEDN 109 (174)
T ss_dssp HTSCGGGTHHHHTHHHHHHHHHCTTCSS
T ss_pred hhcchhhHHHHHHHHHHHHHHHCCCccc
Confidence 54421 124578899999999998
|
| >d2fcea1 a.39.1.5 (A:84-144) Calmodulin {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Cow (Bos taurus) [TaxId: 9913]
Probab=98.80 E-value=6e-09 Score=70.87 Aligned_cols=59 Identities=22% Similarity=0.390 Sum_probs=52.2
Q ss_pred HHHHHhhhcCCCCCCCccHHHHHHHHHhhCCCCCHHHHHHHHHHhhccchHHHHHhcCChHHHHHHHHHhhhhcCCCCCC
Q 042823 327 ALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNSSTLESLCENLPTKEKQKLMEKFREMDTDNSDT 406 (477)
Q Consensus 327 ~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~F~~~D~~~~G~ 406 (477)
.++++|..+|.+++|+|+..||..+++.+|..+++. ++...|+.+|.|++|.
T Consensus 2 el~~aF~~fD~~~~G~I~~~el~~~l~~~g~~~~~~----------------------------ei~~l~~~~D~d~dg~ 53 (61)
T d2fcea1 2 DFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDA----------------------------EVDELLKGVEVDSNGE 53 (61)
T ss_dssp HHHHHHHHHCTTCCSCEEHHHHHHHHHHTTCCCCHH----------------------------HHHHHHTTCCCCTTSE
T ss_pred hHHHHHHHHCCCCCCeEeHHHHHHHHHHcCCCCCHH----------------------------HHHHHHHHcCCCCCCc
Confidence 578899999999999999999999999999888764 4455677899999999
Q ss_pred cCHHHHH
Q 042823 407 LTLSELK 413 (477)
Q Consensus 407 I~~~el~ 413 (477)
|+.+||.
T Consensus 54 I~~~eFl 60 (61)
T d2fcea1 54 IDYKKFI 60 (61)
T ss_dssp ECHHHHH
T ss_pred EeHHHhc
Confidence 9999985
|
| >d1pvaa_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Parvalbumin species: Pike (Esox lucius) [TaxId: 8010]
Probab=98.78 E-value=1.8e-08 Score=77.23 Aligned_cols=83 Identities=16% Similarity=0.191 Sum_probs=66.0
Q ss_pred HHHHHhhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhhhC---CCcHHHHHHH
Q 042823 391 KLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIYK---LETPELLEKA 467 (477)
Q Consensus 391 ~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~~~---~~~~~~l~~a 467 (477)
++..+++.+ +++|.|+.+||..++.. ...++++++++|+.+|.|++|.|+.+|+..++..... ..+++++...
T Consensus 10 eI~~~~~~~--d~dG~idf~EF~~~~~~--~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~l~~~g~~ls~~ev~~~ 85 (109)
T d1pvaa_ 10 DIKKALDAV--KAEGSFNHKKFFALVGL--KAMSANDVKKVFKAIDADASGFIEEEELKFVLKSFAADGRDLTDAETKAF 85 (109)
T ss_dssp HHHHHHHHT--CSTTCCCHHHHHHHHTC--TTSCHHHHHHHHHHHCTTCSSSBCHHHHHTGGGGTCTTCCCCCHHHHHHH
T ss_pred HHHHHHHhc--CCCCCCcHHHHHHHHHH--ccCCHHHHHHHhhCccCCCcCeEcHHHHHHHHHHhhhcCCCCCHHHHHHH
Confidence 344444444 46788999999877643 2356788999999999999999999999988875432 4578899999
Q ss_pred HHHhccCCCC
Q 042823 468 FQYLDKNSDQ 477 (477)
Q Consensus 468 F~~~D~d~~G 477 (477)
|+.+|+||||
T Consensus 86 ~~~~D~d~dG 95 (109)
T d1pvaa_ 86 LKAADKDGDG 95 (109)
T ss_dssp HHHHCTTCSS
T ss_pred HHHHCCCCcC
Confidence 9999999998
|
| >d5pala_ a.39.1.4 (A:) Parvalbumin {Leopard shark (Triakis semifasciata) [TaxId: 30493]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Parvalbumin species: Leopard shark (Triakis semifasciata) [TaxId: 30493]
Probab=98.78 E-value=2.4e-08 Score=76.50 Aligned_cols=83 Identities=12% Similarity=0.142 Sum_probs=66.1
Q ss_pred HHHHHhhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhhh---CCCcHHHHHHH
Q 042823 391 KLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIY---KLETPELLEKA 467 (477)
Q Consensus 391 ~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~~---~~~~~~~l~~a 467 (477)
++.+++..+| .+|.|+.+||..++.. ..-+++++..+|+.+|.|++|.|+.+|+..++.... ...+++++.+.
T Consensus 10 di~~~~~~~~--~~G~idf~eF~~~~~~--~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~l~~~g~~~~~~e~~~~ 85 (109)
T d5pala_ 10 DINKAISAFK--DPGTFDYKRFFHLVGL--KGKTDAQVKEVFEILDKDQSGFIEEEELKGVLKGFSAHGRDLNDTETKAL 85 (109)
T ss_dssp HHHHHHHHTC--STTCCCHHHHHHHHTC--TTCCHHHHHHHHHHHCTTCSSEECHHHHHTHHHHHCTTCCCCCHHHHHHH
T ss_pred HHHHHHHhcC--CCCcCcHHHHHHHHHh--cCCCHHHHHHHHhhhcCCCCCeEcHHHHHHHHHHhhhccCcCCHHHHHHH
Confidence 3445555554 5689999999876642 234678999999999999999999999999887542 24677899999
Q ss_pred HHHhccCCCC
Q 042823 468 FQYLDKNSDQ 477 (477)
Q Consensus 468 F~~~D~d~~G 477 (477)
|+.+|.|+||
T Consensus 86 ~~~~D~d~dG 95 (109)
T d5pala_ 86 LAAGDSDHDG 95 (109)
T ss_dssp HHHHCTTCSS
T ss_pred HHHhCCCCCC
Confidence 9999999998
|
| >d1c7va_ a.39.1.5 (A:) Calcium vector protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium vector protein species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]
Probab=98.70 E-value=5.1e-09 Score=72.90 Aligned_cols=65 Identities=25% Similarity=0.468 Sum_probs=55.0
Q ss_pred HHHHHHhhhcCCCCCCCccHHHHHHHHHhhCCC-CCHHHHHHHHHHhhccchHHHHHhcCChHHHHHHHHHhhhhcCCCC
Q 042823 326 QALKEKFIEMDTDKNGTLSYDELRAGLTKVGSM-LTEFDVKHLMEAVKNSSTLESLCENLPTKEKQKLMEKFREMDTDNS 404 (477)
Q Consensus 326 ~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~-~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~F~~~D~~~~ 404 (477)
..+.++|..+|.+++|+|+.+||..+++.+|.. .++. ++..+|+.+|.|++
T Consensus 2 eel~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~s~~----------------------------e~~~~~~~~D~d~d 53 (68)
T d1c7va_ 2 EEILRAFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDA----------------------------EVEEAMKEADEDGN 53 (68)
T ss_dssp HHHHHHHHHHSCSGGGEECHHHHHHHSSTTTTCCCCHH----------------------------HHHHHHHHHCSSGG
T ss_pred HHHHHHHHHHcCCCcCeEcHHHHHHHHHHhCCCCCCHH----------------------------HHHHHHHHhCCCCC
Confidence 458899999999999999999999999999875 4553 44556777899999
Q ss_pred CCcCHHHHHHHHHH
Q 042823 405 DTLTLSELKAGLAK 418 (477)
Q Consensus 405 G~I~~~el~~~l~~ 418 (477)
|.|+.+||..+|.+
T Consensus 54 G~i~~~EF~~~m~r 67 (68)
T d1c7va_ 54 GVIDIPEFMDLIKK 67 (68)
T ss_dssp GSEEHHHHHHHHHC
T ss_pred CcEeHHHHHHHHHh
Confidence 99999999988753
|
| >d1rwya_ a.39.1.4 (A:) Parvalbumin {Rat (Rattus rattus) [TaxId: 10117]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Parvalbumin species: Rat (Rattus rattus) [TaxId: 10117]
Probab=98.69 E-value=5.5e-08 Score=74.58 Aligned_cols=88 Identities=13% Similarity=0.120 Sum_probs=68.5
Q ss_pred cCChHHHHHHHHHhhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhhhC---CC
Q 042823 383 NLPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIYK---LE 459 (477)
Q Consensus 383 ~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~~~---~~ 459 (477)
.++.+++ ..++..+ +.+|.|+.+||..++..-+ .++++++.+++.+|.|++|.|+.+||..++..... ..
T Consensus 5 ~~~~~~i---~~~~~~~--~~~~~i~f~eF~~~~~~~~--~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~l~~~~~~~ 77 (109)
T d1rwya_ 5 LLSAEDI---KKAIGAF--TAADSFDHKKFFQMVGLKK--KSADDVKKVFHILDKDKSGFIEEDELGSILKGFSSDARDL 77 (109)
T ss_dssp HSCHHHH---HHHHHTT--CSTTCCCHHHHHHHHTGGG--SCHHHHHHHHHHHSTTCSSEECHHHHHTHHHHHCTTCCCC
T ss_pred hcCHHHH---HHHHHhc--ccCCCcCHHHHHHHHcccc--CCHHHHHHHhhcccCCCCCcCcHHHHHHHHHHhccccccC
Confidence 3444444 4444444 3458899999988775432 46778999999999999999999999999976533 45
Q ss_pred cHHHHHHHHHHhccCCCC
Q 042823 460 TPELLEKAFQYLDKNSDQ 477 (477)
Q Consensus 460 ~~~~l~~aF~~~D~d~~G 477 (477)
+++++...|+.+|.|+||
T Consensus 78 ~~~e~~~~~~~~D~d~dG 95 (109)
T d1rwya_ 78 SAKETKTLMAAGDKDGDG 95 (109)
T ss_dssp CHHHHHHHHHHHCTTCSS
T ss_pred CHHHHHHHHHHhCCCCCC
Confidence 778999999999999998
|
| >d3cr5x1 a.39.1.2 (X:0-89) Calcyclin (S100) {Cow (Bos taurus), s100b [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Cow (Bos taurus), s100b [TaxId: 9913]
Probab=98.67 E-value=6.7e-08 Score=70.33 Aligned_cols=67 Identities=30% Similarity=0.424 Sum_probs=56.3
Q ss_pred HHHHHHHhhhh-cCCCC-CCcCHHHHHHHHHH-----cCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhh
Q 042823 389 KQKLMEKFREM-DTDNS-DTLTLSELKAGLAK-----LGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDI 455 (477)
Q Consensus 389 ~~~l~~~F~~~-D~~~~-G~I~~~el~~~l~~-----~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~ 455 (477)
+..+..+|..| .++|+ ++++..||+.+|+. ++..-.+..++++++.+|.|+||.|+|+||+.++...
T Consensus 8 i~~ii~vFhkYa~~~G~~~tLsk~Elk~Ll~~El~~~l~~~~d~~~~d~~m~~LD~n~Dg~vdF~EF~~li~~l 81 (90)
T d3cr5x1 8 VVALIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSDGDGECDFQEFMAFVAMI 81 (90)
T ss_dssp HHHHHHHHHHHHTSSSSTTSBCHHHHHHHHHHHCTTTSCCCCSHHHHHHHHHHHCTTSSSSBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccCCCcCcCCHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHhcCCCCCcCCHHHHHHHHHHH
Confidence 46788899998 45665 68999999999987 3445567789999999999999999999999998753
|
| >d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Type IIIa 3',5"-aminoglycoside phosphotransferase species: Enterococcus faecalis [TaxId: 1351]
Probab=98.66 E-value=4.9e-08 Score=87.93 Aligned_cols=143 Identities=16% Similarity=0.149 Sum_probs=96.5
Q ss_pred ccccccccccccccCCeEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEE
Q 042823 21 VMLHYFFGRMLGRGQFGVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAVH 100 (477)
Q Consensus 21 ~~~~Y~~~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~~ 100 (477)
+.+.|+..+..+-++.+.||+.. ..++.+++|+....... ....+.+|...+..+..+--+.+++.+..+++..|
T Consensus 12 ~~~~~~~~~~~~G~s~~~v~rv~--~~~~~~vlk~~~~~~~~---~~~~~~~E~~~l~~l~~~vpvP~vl~~~~~~~~~~ 86 (263)
T d1j7la_ 12 LIEKYRCVKDTEGMSPAKVYKLV--GENENLYLKMTDSRYKG---TTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSN 86 (263)
T ss_dssp HHTTSEEEECSCCCSSSEEEEEE--CSSCEEEEEEECGGGTT---STTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEE
T ss_pred hhhceEEEEcCCCCCCCcEEEEE--eCCCeEEEEEcCCCccc---chhhHHHHHHHHHHHhccCCCCcEEEEEecCCceE
Confidence 34567777766555667999875 45677888987543221 22346778888887766655788888888899999
Q ss_pred EEEeccCCCchHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH--------------------------------------
Q 042823 101 VVMELCEGGDLFDRIIAKGYNSERDAATVLRAIVNAVNVCHS-------------------------------------- 142 (477)
Q Consensus 101 lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~~L~~lH~-------------------------------------- 142 (477)
+||++++|.++.+.... ......++.++...+..||+
T Consensus 87 lv~~~l~G~~~~~~~~~-----~~~~~~~~~~l~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (263)
T d1j7la_ 87 LLMSEADGVLCSEEYED-----EQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEED 161 (263)
T ss_dssp EEEECCSSEEHHHHTTT-----CSCHHHHHHHHHHHHHHHHTSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCCGGGGSTT
T ss_pred EEEEecccccccccccc-----cccHHHHHHHHHHHHHHHhccCccccccCcchhhhhhhHHHHHHHHhhhhhhhccccc
Confidence 99999999877544321 11122334444445555552
Q ss_pred ---------------------cCCeeccCCCCceeeeecCCCCCEEEeecCCccc
Q 042823 143 ---------------------MGVMHRDLKPENFSFISRDDNALLKVTDFGSALL 176 (477)
Q Consensus 143 ---------------------~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~ 176 (477)
..++|+|+.|.||++ +++..+-|+||+.+..
T Consensus 162 ~~~~~~~~~~~~l~~~~~~~~~~l~HgD~~~~Nil~---~~~~~~~lIDwe~a~~ 213 (263)
T d1j7la_ 162 TPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFV---KDGKVSGFIDLGRSGR 213 (263)
T ss_dssp CSCSSHHHHHHHHHHSCCCCCEEEECSCCCTTSEEE---ETTEEEEECCCTTCEE
T ss_pred ccchHHHHHHHHHHhcCCcCCcEEEEeeccCcceee---cCCceEEEeechhccc
Confidence 137999999999999 4555567999997753
|
| >d1nyaa_ a.39.1.5 (A:) Calerythrin {Saccharopolyspora erythraea [TaxId: 1836]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calerythrin species: Saccharopolyspora erythraea [TaxId: 1836]
Probab=98.64 E-value=7e-08 Score=81.03 Aligned_cols=90 Identities=16% Similarity=0.332 Sum_probs=70.3
Q ss_pred HHHHHHHHhhhhcCCCCCCcCHHHHHHHHHHc----CCCCCHHHH-----------HHHHHHhcCCCCCcccHHHHHHHH
Q 042823 388 EKQKLMEKFREMDTDNSDTLTLSELKAGLAKL----GSALEESEV-----------NQYMEAGDIDGNGNIDSIEFVNLM 452 (477)
Q Consensus 388 ~~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~----g~~~~~~~i-----------~~~~~~~d~~~~g~i~~~eF~~~~ 452 (477)
..++|+++|+.+|.|++|.|+.+||+.++..+ +..++..++ +.++...+.+++|.|++.++...+
T Consensus 5 ~~~~l~~~F~~~D~d~dG~Is~~Ef~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 84 (176)
T d1nyaa_ 5 ASDRLKKRFDRWDFDGNGALERADFEKEAQHIAEAFGKDAGAAEVQTLKNAFGGLFDYLAKEAGVGSDGSLTEEQFIRVT 84 (176)
T ss_dssp HHHHHHHHHHHCCSSCCSSBCSHHHHHHHHHHHHHTSSCSSSHHHHHHHHHHHHHHHHHHHHHTSCTTCCBCHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHHHHHcCCcccHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccHHHHHHHH
Confidence 45789999999999999999999999998764 334433333 445567789999999999999988
Q ss_pred HhhhCCC--------cHHHHHHHHHHhccCCCC
Q 042823 453 TDIYKLE--------TPELLEKAFQYLDKNSDQ 477 (477)
Q Consensus 453 ~~~~~~~--------~~~~l~~aF~~~D~d~~G 477 (477)
....... ..+.++.+|..||.|+||
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~dG 117 (176)
T d1nyaa_ 85 ENLIFEQGEASFNRVLGPVVKGIVGMCDKNADG 117 (176)
T ss_dssp HHHHSSSCHHHHHHHHHHHHHHHHHHTCSSCCS
T ss_pred hhhhhhhhhhhhHHHHHHHHHHHHHHHccCCCh
Confidence 7554422 125688899999999998
|
| >d1c07a_ a.39.1.6 (A:) Eps15 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Eps15 homology domain (EH domain) domain: Eps15 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.59 E-value=2.3e-08 Score=74.68 Aligned_cols=68 Identities=22% Similarity=0.291 Sum_probs=58.7
Q ss_pred CCchhhHHHHHHhhhcCCCCCCCccHHHHHHHHHhhCCCCCHHHHHHHHHHhhccchHHHHHhcCChHHHHHHHHHhhhh
Q 042823 320 LPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNSSTLESLCENLPTKEKQKLMEKFREM 399 (477)
Q Consensus 320 ~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~F~~~ 399 (477)
+++++...+.++|..+|.|++|.|+.+|+..++.+.+. +. +.+.++|+.+
T Consensus 4 lt~~e~~~~~~~F~~~D~d~~G~is~~e~~~~l~~~~l--~~----------------------------~~l~~i~~~~ 53 (95)
T d1c07a_ 4 VSPAEKAKYDEIFLKTDKDMDGFVSGLEVREIFLKTGL--PS----------------------------TLLAHIWSLC 53 (95)
T ss_dssp SCSHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHTTTC--CH----------------------------HHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHCCCCCCCCcHHHHHHHHHhcCC--CH----------------------------HHHHHHHHHh
Confidence 56788889999999999999999999999999888753 22 3567889999
Q ss_pred cCCCCCCcCHHHHHHHHH
Q 042823 400 DTDNSDTLTLSELKAGLA 417 (477)
Q Consensus 400 D~~~~G~I~~~el~~~l~ 417 (477)
|.|++|+|+.+||..+|.
T Consensus 54 D~d~dG~l~~~EF~~am~ 71 (95)
T d1c07a_ 54 DTKDCGKLSKDQFALAFH 71 (95)
T ss_dssp CTTCSSSEETTTHHHHHH
T ss_pred CCCCCCeEcHHHHHHHHH
Confidence 999999999999987764
|
| >d1wlza1 a.39.1.7 (A:229-311) DJ-1-binding protein, DJBP {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: EF-hand modules in multidomain proteins domain: DJ-1-binding protein, DJBP species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.58 E-value=8.9e-08 Score=69.52 Aligned_cols=65 Identities=23% Similarity=0.335 Sum_probs=56.5
Q ss_pred hhHHHHHHhhhcCCCCCCCccHHHHHHHHHhhCCCCCHHHHHHHHHHhhccchHHHHHhcCChHHHHHHHHHhhhhcCCC
Q 042823 324 ETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNSSTLESLCENLPTKEKQKLMEKFREMDTDN 403 (477)
Q Consensus 324 ~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~F~~~D~~~ 403 (477)
....+.++|..+|.+++|.|+.+||..+|..++..+++. ++..+|..+|.|+
T Consensus 18 ~~~~l~~~F~~~D~~~~G~i~~~ef~~~l~~~~~~l~~~----------------------------e~~~l~~~~d~~~ 69 (83)
T d1wlza1 18 HYHAITQEFENFDTMKTNTISREEFRAICNRRVQILTDE----------------------------QFDRLWNEMPVNA 69 (83)
T ss_dssp THHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHTCCCCHH----------------------------HHHHHHTTSCBCT
T ss_pred HHHHHHHHHHHHCCCCCceEChhHHHHHHHHhCCCCChh----------------------------HHHHHhhccccCC
Confidence 356788999999999999999999999999999877763 4566788899999
Q ss_pred CCCcCHHHHHHHH
Q 042823 404 SDTLTLSELKAGL 416 (477)
Q Consensus 404 ~G~I~~~el~~~l 416 (477)
+|.|+..||...+
T Consensus 70 ~g~I~y~eFl~~f 82 (83)
T d1wlza1 70 KGRLKYPDFLSRF 82 (83)
T ss_dssp TSCBCHHHHHHHH
T ss_pred CCcEeHHHHHHHh
Confidence 9999999998765
|
| >d2pvba_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Parvalbumin species: Pike (Esox lucius) [TaxId: 8010]
Probab=98.57 E-value=1.2e-07 Score=72.17 Aligned_cols=82 Identities=16% Similarity=0.127 Sum_probs=65.7
Q ss_pred HHHHhhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhhhC---CCcHHHHHHHH
Q 042823 392 LMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIYK---LETPELLEKAF 468 (477)
Q Consensus 392 l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~~~---~~~~~~l~~aF 468 (477)
+..+++..|. +|.|+..||..++..-+ -+.++++.+++.+|.+++|.|+..||..++..... ..+++++...|
T Consensus 10 i~~~~~~~~~--~gsi~~~eF~~~~~l~~--~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~l~~~~~~~~~~~~~~l~ 85 (107)
T d2pvba_ 10 VAAALAACSA--ADSFKHKEFFAKVGLAS--KSLDDVKKAFYVIDQDKSGFIEEDELKLFLQNFSPSARALTDAETKAFL 85 (107)
T ss_dssp HHHHHHHTCS--TTCCCHHHHHHHHTGGG--SCHHHHHHHHHHHCTTCSSSBCHHHHHTGGGGTCTTSCCCCHHHHHHHH
T ss_pred HHHHHHhccC--CCCcCHHHHHHHHhccc--CCHHHHHHHHHhhccCCCCcCcHHHHHHHHHHhhcccccCCHHHHHHHH
Confidence 4455555554 45699999987765432 36778999999999999999999999999876532 45788999999
Q ss_pred HHhccCCCC
Q 042823 469 QYLDKNSDQ 477 (477)
Q Consensus 469 ~~~D~d~~G 477 (477)
+.+|+|+||
T Consensus 86 ~~~D~d~dG 94 (107)
T d2pvba_ 86 ADGDKDGDG 94 (107)
T ss_dssp HHHCTTCSS
T ss_pred HHhCCCCCC
Confidence 999999998
|
| >d1fi6a_ a.39.1.6 (A:) Reps1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Eps15 homology domain (EH domain) domain: Reps1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=98.54 E-value=6.2e-08 Score=71.77 Aligned_cols=69 Identities=25% Similarity=0.268 Sum_probs=59.1
Q ss_pred CCchhhHHHHHHhhhcCCCCCCCccHHHHHHHHHhhCCCCCHHHHHHHHHHhhccchHHHHHhcCChHHHHHHHHHhhhh
Q 042823 320 LPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNSSTLESLCENLPTKEKQKLMEKFREM 399 (477)
Q Consensus 320 ~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~F~~~ 399 (477)
+++++...+++.|..+|.+++|+|+.+|+...+.+.+. +. ..+..+++.+
T Consensus 3 ls~ee~~~y~~~F~~~D~d~~G~i~~~e~~~~l~~~~l--~~----------------------------~~l~~i~~~~ 52 (92)
T d1fi6a_ 3 ITDEQRQYYVNQFKTIQPDLNGFIPGSAAKEFFTKSKL--PI----------------------------LELSHIWELS 52 (92)
T ss_dssp CCHHHHHHHHHHHTTTCCSTTCEEEHHHHHHHHHHHSS--CH----------------------------HHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCcccchhHHHHHHHHHHccC--CH----------------------------HHHHHHHHHh
Confidence 56788889999999999999999999999999988753 22 3677788899
Q ss_pred cCCCCCCcCHHHHHHHHHH
Q 042823 400 DTDNSDTLTLSELKAGLAK 418 (477)
Q Consensus 400 D~~~~G~I~~~el~~~l~~ 418 (477)
|.|++|.|+.+||..++.-
T Consensus 53 D~d~dG~l~~~EF~~a~~l 71 (92)
T d1fi6a_ 53 DFDKDGALTLDEFCAAFHL 71 (92)
T ss_dssp CTTCSSEEEHHHHHHHHHH
T ss_pred CCCCCCeecHHHHHHHHHH
Confidence 9999999999999877643
|
| >d1rroa_ a.39.1.4 (A:) Oncomodulin {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Oncomodulin species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=98.51 E-value=1.9e-07 Score=71.34 Aligned_cols=88 Identities=16% Similarity=0.173 Sum_probs=66.8
Q ss_pred cCChHHHHHHHHHhhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhhhC---CC
Q 042823 383 NLPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIYK---LE 459 (477)
Q Consensus 383 ~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~~~---~~ 459 (477)
.++.+++.. +.+.+ +.+|.|+.+++...+..- ..+.++++++|+.+|.|++|.|+++||..++..... ..
T Consensus 5 ~ls~~dI~~---~l~~~--~~~~s~~~~~F~~~~~~~--~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~l~~~~~~l 77 (108)
T d1rroa_ 5 ILSAEDIAA---ALQEC--QDPDTFEPQKFFQTSGLS--KMSASQVKDIFRFIDNDQSGYLDGDELKYFLQKFQSDAREL 77 (108)
T ss_dssp TSCHHHHHH---HHHHT--CSTTCCCHHHHHHHHSGG--GSCHHHHHHHHHHHCTTCSSEECTHHHHTGGGGTCTTSCCC
T ss_pred hCCHHHHHH---HHHhc--ccCCCccHHHHHHHHccC--cCCHHHHHHHHhhhcCCCCCeEcHHHHHHHHHHHHhccCCC
Confidence 345544444 33333 456779999996554322 346788999999999999999999999999876432 45
Q ss_pred cHHHHHHHHHHhccCCCC
Q 042823 460 TPELLEKAFQYLDKNSDQ 477 (477)
Q Consensus 460 ~~~~l~~aF~~~D~d~~G 477 (477)
+++++...|+.+|+|+||
T Consensus 78 ~~~~~~~~~~~~D~d~dG 95 (108)
T d1rroa_ 78 TESETKSLMDAADNDGDG 95 (108)
T ss_dssp CHHHHHHHHHHHCCSSSS
T ss_pred CHHHHHHHHHHhCCCCCC
Confidence 778999999999999998
|
| >d1qlsa_ a.39.1.2 (A:) Calcyclin (S100) {Pig (Sus scrofa), calgizzarin s100c (s100a11) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Pig (Sus scrofa), calgizzarin s100c (s100a11) [TaxId: 9823]
Probab=98.50 E-value=1.1e-07 Score=69.85 Aligned_cols=67 Identities=19% Similarity=0.373 Sum_probs=55.6
Q ss_pred HHHHHHHhhhh-cCCCC-CCcCHHHHHHHHHH-----cCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhh
Q 042823 389 KQKLMEKFREM-DTDNS-DTLTLSELKAGLAK-----LGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDI 455 (477)
Q Consensus 389 ~~~l~~~F~~~-D~~~~-G~I~~~el~~~l~~-----~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~ 455 (477)
+..+..+|..| .++|+ ++++..||+.+|.. ++..-.+..++++++.+|.|+||.|+|+||+.++...
T Consensus 8 i~~ii~vFhkYa~~~G~~~tLsk~Elk~Ll~~El~~~l~~~~d~~~vd~im~~LD~n~Dg~vdF~EF~~li~~l 81 (95)
T d1qlsa_ 8 IESLIAIFQKHAGRDGNNTKISKTEFLIFMNTELAAFTQNQKDPGVLDRMMKKLDLDSDGQLDFQEFLNLIGGL 81 (95)
T ss_dssp HHHHHHHHHHHHTTSSCTTCBCHHHHHHHHTTTSHHHHHHCCCTHHHHHHHHHHCTTCSSSBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCcCCCcCcCCHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHH
Confidence 45677889887 45665 78999999999976 4445566789999999999999999999999998753
|
| >d2zkmx1 a.39.1.7 (X:142-311) Phospholipase C-beta-2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: EF-hand modules in multidomain proteins domain: Phospholipase C-beta-2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.48 E-value=2.3e-09 Score=89.98 Aligned_cols=83 Identities=6% Similarity=0.077 Sum_probs=55.6
Q ss_pred HHHHhhh--hcCCCCCCcCHHHHHHHHHHcCCCC--CHHHHHHHHHHhcCCCCCcccHHHHHHHHHhhhCCCcHHHHHHH
Q 042823 392 LMEKFRE--MDTDNSDTLTLSELKAGLAKLGSAL--EESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIYKLETPELLEKA 467 (477)
Q Consensus 392 l~~~F~~--~D~~~~G~I~~~el~~~l~~~g~~~--~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~l~~a 467 (477)
|+++|.. +|.|++|.||.+||..+++..+... +.+.+..++...|.+++|.|+|+||..++.... ..+++..+
T Consensus 7 l~k~~~k~~~d~n~dG~Is~~el~k~l~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~F~eF~~~~~~l~---~r~ei~~~ 83 (170)
T d2zkmx1 7 LDKILVKLKMQLNSEGKIPVKNFFQMFPADRKRVEAALSACHLPKGKNDAINPEDFPEPVYKSFLMSLC---PRPEIDEI 83 (170)
T ss_dssp HHHHHHHHHHSCCTTSCEEHHHHHHHSCSCHHHHHHHHHHTTCCCCTTCEECGGGCCHHHHHHHHHHHS---CCHHHHTT
T ss_pred HHHHHHHHhcccCCCCCCcHHHHHHHHHHhhhhHHHHHHHHhhhhccccccCCCccCHHHHHHHHhccC---CHHHHHHH
Confidence 4455554 7999999999999999886554322 223455566778888999999999999987653 23578899
Q ss_pred HHHhccCCCC
Q 042823 468 FQYLDKNSDQ 477 (477)
Q Consensus 468 F~~~D~d~~G 477 (477)
|+.||.|++|
T Consensus 84 F~~~d~d~~~ 93 (170)
T d2zkmx1 84 FTSYHAKAKP 93 (170)
T ss_dssp CC--------
T ss_pred HHHHcCCCCC
Confidence 9999998876
|
| >d1ctda_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=98.47 E-value=8.2e-08 Score=52.04 Aligned_cols=32 Identities=25% Similarity=0.418 Sum_probs=29.1
Q ss_pred HHHHHHHhhhhcCCCCCCcCHHHHHHHHHHcC
Q 042823 389 KQKLMEKFREMDTDNSDTLTLSELKAGLAKLG 420 (477)
Q Consensus 389 ~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g 420 (477)
.++|.++|+.||+|.||+|+.+||..++++.|
T Consensus 3 EeELae~FRifDkNaDGyiD~eEl~~ilr~tG 34 (34)
T d1ctda_ 3 EEELANAFRIFDKNADGYIDIEELGEILRATG 34 (34)
T ss_dssp HHHHHHHHHTTCCSSSSCBCHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHccCCcccccHHHHHHHHHhcC
Confidence 46899999999999999999999999998754
|
| >d1snla_ a.39.1.7 (A:) Nucleobindin 1 (CALNUC) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: EF-hand modules in multidomain proteins domain: Nucleobindin 1 (CALNUC) species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.44 E-value=9.7e-08 Score=71.86 Aligned_cols=79 Identities=22% Similarity=0.256 Sum_probs=55.0
Q ss_pred HHHHhhhcCCCCCCCccHHHHHHHHHhhCCCCCHHHHHHHHHHhhccchHHHHHhcCChHHHHHHHHHhhhhcCCCCCCc
Q 042823 328 LKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNSSTLESLCENLPTKEKQKLMEKFREMDTDNSDTL 407 (477)
Q Consensus 328 l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~F~~~D~~~~G~I 407 (477)
++.+|..+|.|++|+|+.+||..++++++...... ....... ..........+..+|+.+|.|++|.|
T Consensus 18 ~r~~F~~~D~DgdG~i~~~El~~~l~~~~~~~~~~--------~~~~~~~----~~~~~~~~~~v~~~~~~~D~d~DG~I 85 (99)
T d1snla_ 18 PKTFFILHDINSDGVLDEQELEALFTKELEKVYDP--------KNEEDDM----REMEEERLRMREHVMKNVDTNQDRLV 85 (99)
T ss_dssp HHHHHHHHCSSCCSEEEHHHHHHHHHHHHHTTSCC--------SSCSSHH----HHTTHHHHHHHHHHHHHTCSSCSSEE
T ss_pred HHHHHHHHCCCCCCcCCHHHHHHHHHHHHHhcchh--------hhhhhhh----hhhHHHHHHHHHHHHHHcCCCCCCcC
Confidence 67899999999999999999999987753211100 0000000 00112223467889999999999999
Q ss_pred CHHHHHHHHHH
Q 042823 408 TLSELKAGLAK 418 (477)
Q Consensus 408 ~~~el~~~l~~ 418 (477)
|.+||..++++
T Consensus 86 s~~EF~~~~~~ 96 (99)
T d1snla_ 86 TLEEFLASTQR 96 (99)
T ss_dssp EHHHHHHHHHC
T ss_pred cHHHHHHHHhc
Confidence 99999998764
|
| >d1qx2a_ a.39.1.1 (A:) Calbindin D9K {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calbindin D9K domain: Calbindin D9K species: Cow (Bos taurus) [TaxId: 9913]
Probab=98.43 E-value=5.2e-08 Score=69.39 Aligned_cols=69 Identities=19% Similarity=0.303 Sum_probs=54.5
Q ss_pred hHHHHHHhhhcCCC--CCCCccHHHHHHHHHhhCCCCCHHHHHHHHHHhhccchHHHHHhcCChHHHHHHHHHhhhhcCC
Q 042823 325 TQALKEKFIEMDTD--KNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNSSTLESLCENLPTKEKQKLMEKFREMDTD 402 (477)
Q Consensus 325 ~~~l~~~F~~~D~~--~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~F~~~D~~ 402 (477)
...++++|..||.+ ++|+|+.+||..+|+.+|..++.. ..++.+.|+.+|.|
T Consensus 4 ~eel~~~F~~fd~~~~~~G~I~~~El~~~l~~lg~~~~~~--------------------------~~ei~~~~~~~D~d 57 (76)
T d1qx2a_ 4 PEEIKGAFEVFAAKEGDPNQISKEELKLVMQTLGPSLLKG--------------------------MSTLDEMIEEVDKN 57 (76)
T ss_dssp HHHHHHHHHHHHTSSSCTTSEEHHHHHHHHHHHGGGSCTT--------------------------SCSHHHHHHHHCTT
T ss_pred HHHHHHHHHHHcccCCCCCEECHHHHHHHHHHhCCcCCCC--------------------------HHHHHHHHHHhhcC
Confidence 45688889988654 479999999999999998655321 12456678889999
Q ss_pred CCCCcCHHHHHHHHHHc
Q 042823 403 NSDTLTLSELKAGLAKL 419 (477)
Q Consensus 403 ~~G~I~~~el~~~l~~~ 419 (477)
++|.|+.+||..++..+
T Consensus 58 ~dG~I~f~EF~~~m~~~ 74 (76)
T d1qx2a_ 58 GDGEVSFEEFLVMMKKI 74 (76)
T ss_dssp CSSEECHHHHHHHHHHH
T ss_pred CCCcCcHHHHHHHHHHH
Confidence 99999999999988764
|
| >d1j55a_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100p [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100p [TaxId: 9606]
Probab=98.38 E-value=3.9e-07 Score=66.68 Aligned_cols=67 Identities=27% Similarity=0.452 Sum_probs=52.1
Q ss_pred HHHHHHHhhhhc-CCCC-CCcCHHHHHHHHHH-c----CCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhh
Q 042823 389 KQKLMEKFREMD-TDNS-DTLTLSELKAGLAK-L----GSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDI 455 (477)
Q Consensus 389 ~~~l~~~F~~~D-~~~~-G~I~~~el~~~l~~-~----g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~ 455 (477)
+..+..+|..|- ++|+ ++++..||+.++.. + +..-.+..++++++.+|.|+||.|+|+||+.++...
T Consensus 8 i~~ii~vFhkYa~~~g~~~tLsk~Elk~Ll~~El~~~l~~~~d~~~vd~~m~~LD~n~Dg~vdF~EF~~li~~l 81 (94)
T d1j55a_ 8 MGMIIDVFSRYSGSEGSTQTLTKGELKVLMEKELPGFLQSGKDKDAVDKLLKDLDANGDAQVDFSEFIVFVAAI 81 (94)
T ss_dssp HHHHHHHHHHHTTSSSCTTEECHHHHHHHHHHHSTTCC------CHHHHHHHHHCSSSSSSEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcccCCCcccCCHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHhcCCCCCcCCHHHHHHHHHHH
Confidence 467788999984 4554 68999999999977 3 334446679999999999999999999999998753
|
| >d2jxca1 a.39.1.6 (A:121-215) Eps15 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Eps15 homology domain (EH domain) domain: Eps15 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.37 E-value=2.3e-07 Score=68.94 Aligned_cols=68 Identities=19% Similarity=0.191 Sum_probs=57.8
Q ss_pred CCchhhHHHHHHhhhcCCCCCCCccHHHHHHHHHhhCCCCCHHHHHHHHHHhhccchHHHHHhcCChHHHHHHHHHhhhh
Q 042823 320 LPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNSSTLESLCENLPTKEKQKLMEKFREM 399 (477)
Q Consensus 320 ~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~F~~~ 399 (477)
+++++...+.++|..+| +++|.|+.+|+...|.+.|. +. +.+..+++.+
T Consensus 4 ls~ee~~~y~~~F~~~D-~~~G~i~~~el~~~l~~~gl--~~----------------------------~~L~~Iw~~~ 52 (95)
T d2jxca1 4 VKPEDKAKYDAIFDSLS-PVNGFLSGDKVKPVLLNSKL--PV----------------------------DILGRVWELS 52 (95)
T ss_dssp SCHHHHHHHHHHHHHTC-CBTTEEEHHHHHHHHTTSSC--CH----------------------------HHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhC-CCCCceeHHHHHHHHHHcCC--CH----------------------------HHHHHHHHHh
Confidence 56788899999999999 89999999999999988763 22 3577888999
Q ss_pred cCCCCCCcCHHHHHHHHHH
Q 042823 400 DTDNSDTLTLSELKAGLAK 418 (477)
Q Consensus 400 D~~~~G~I~~~el~~~l~~ 418 (477)
|.|++|+|+.+||..++.-
T Consensus 53 D~~~dG~l~~~EF~~a~~L 71 (95)
T d2jxca1 53 DIDHDGMLDRDEFAVAMFL 71 (95)
T ss_dssp CTTCSSEEEHHHHHHHHHH
T ss_pred cCCCCCeEcHHHHHHHHHH
Confidence 9999999999999776643
|
| >d1iq3a_ a.39.1.6 (A:) Pob1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Eps15 homology domain (EH domain) domain: Pob1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.22 E-value=3.1e-07 Score=70.20 Aligned_cols=70 Identities=20% Similarity=0.217 Sum_probs=58.9
Q ss_pred cCCchhhHHHHHHhhhcCCCCCCCccHHHHHHHHHhhCCCCCHHHHHHHHHHhhccchHHHHHhcCChHHHHHHHHHhhh
Q 042823 319 YLPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNSSTLESLCENLPTKEKQKLMEKFRE 398 (477)
Q Consensus 319 ~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~F~~ 398 (477)
.++.++...+.++|..+|.+++|+|+.+|+...|.+.|... ..|.++++.
T Consensus 15 ~lt~ee~~~y~~lF~~~D~d~~G~Is~~e~~~~l~~s~L~~------------------------------~~L~~Iw~l 64 (110)
T d1iq3a_ 15 RITEEQREYYVNQFRSLQPDPSSFISGSVAKNFFTKSKLSI------------------------------PELSYIWEL 64 (110)
T ss_dssp CCSSSSHHHHHHHHHHHCCSSSSEEEHHHHHHHCCSSSCSS------------------------------CCHHHHHHH
T ss_pred ccCHHHHHHHHHHHHHhCCCcccchhHHHHHHHHHhhccch------------------------------HHHHHHHHH
Confidence 45678889999999999999999999999999887765321 246678888
Q ss_pred hcCCCCCCcCHHHHHHHHHH
Q 042823 399 MDTDNSDTLTLSELKAGLAK 418 (477)
Q Consensus 399 ~D~~~~G~I~~~el~~~l~~ 418 (477)
+|.|++|.|+.+||..+|.-
T Consensus 65 ~D~d~dG~l~~~EF~~am~L 84 (110)
T d1iq3a_ 65 SDADCDGALTLPEFCAAFHL 84 (110)
T ss_dssp HCSSSCSEEEHHHHHHHHHH
T ss_pred hccCCCCeECHHHHHHHHHH
Confidence 99999999999999887754
|
| >d1zfsa1 a.39.1.2 (A:1-93) Calcyclin (S100) {Rat (Rattus norvegicus), s100a1 [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Rat (Rattus norvegicus), s100a1 [TaxId: 10116]
Probab=98.21 E-value=8e-07 Score=65.69 Aligned_cols=73 Identities=19% Similarity=0.232 Sum_probs=55.4
Q ss_pred hhHHHHHHhhhc-CCCCC-CCccHHHHHHHHHhhCCCCCHHHHHHHHHHhhccchHHHHHhcCChHHHHHHHHHhhhhcC
Q 042823 324 ETQALKEKFIEM-DTDKN-GTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNSSTLESLCENLPTKEKQKLMEKFREMDT 401 (477)
Q Consensus 324 ~~~~l~~~F~~~-D~~~~-G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~F~~~D~ 401 (477)
.+..+.++|..+ |.+++ |+|+.+||+++|+.++..... .....+.+.+.|+.+|.
T Consensus 7 ~i~~l~~~F~~y~d~dg~~G~is~~El~~~L~~~~~~~~~-----------------------~~~~~~~~~~~~~~~D~ 63 (93)
T d1zfsa1 7 AMETLINVFHAHSGKEGDKYKLSKKELKDLLQTELSSFLD-----------------------VQKDADAVDKIMKELDE 63 (93)
T ss_dssp HHHHHHHHHHHHGGGSSCCSSEEHHHHHHHHHHHSTTTSC-----------------------CSSCHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHcccCCCCCEecHHHHHHHHHHhcccccc-----------------------cCCCHHHHHHHHHHHcC
Confidence 456788889877 88874 999999999999887542210 01113456778899999
Q ss_pred CCCCCcCHHHHHHHHHHc
Q 042823 402 DNSDTLTLSELKAGLAKL 419 (477)
Q Consensus 402 ~~~G~I~~~el~~~l~~~ 419 (477)
|++|.|+.+||..++..+
T Consensus 64 d~dG~Idf~EF~~lm~~l 81 (93)
T d1zfsa1 64 NGDGEVDFQEFVVLVAAL 81 (93)
T ss_dssp TCCSEECSHHHHHHHHHH
T ss_pred CCCCCCcHHHHHHHHHHH
Confidence 999999999999988664
|
| >d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Methylthioribose kinase MtnK species: Bacillus subtilis [TaxId: 1423]
Probab=98.20 E-value=1.8e-06 Score=82.25 Aligned_cols=82 Identities=15% Similarity=0.078 Sum_probs=50.6
Q ss_pred cccccccCCeEEEEEEEccCCceEEEEEeecCC----ccchhhHHHHHHHHHHHHhccCC--CCeeEEEEEEEeCCeEEE
Q 042823 28 GRMLGRGQFGVSYLCTENSTNRPYACKSIAKKP----KMRLAENDMIRREIQIRLYLSGQ--PNVVEFKSTYEDETAVHV 101 (477)
Q Consensus 28 ~~~iG~G~~g~V~~~~~~~~~~~~aiK~~~~~~----~~~~~~~~~~~~e~~~~~~l~~h--pniv~~~~~~~~~~~~~l 101 (477)
.+.||.|....||++.+..+++.+++|.-.... ..-.....+...|...+..+..+ ..+++++.+ ++...++
T Consensus 31 ~~eig~G~~N~vfrV~~~~~~~svivKqa~p~~r~~g~~~~~~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--d~~~~~l 108 (392)
T d2pula1 31 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVT 108 (392)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCGGGC--CCCCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEE
T ss_pred EEEeCCCceEeEEEEEeCCCCeEEEEecCCchhcccCCCCCCCHHHHHHHHHHHHHhhhhCCCCcceEEEE--cCCCCEE
Confidence 457899999999999887778889999643211 00011234456677777766544 345566543 4455679
Q ss_pred EEeccCCCch
Q 042823 102 VMELCEGGDL 111 (477)
Q Consensus 102 v~e~~~gg~L 111 (477)
|||++++..+
T Consensus 109 vmE~L~~~~~ 118 (392)
T d2pula1 109 VMEDLSHLKI 118 (392)
T ss_dssp EECCCTTSEE
T ss_pred EEeccCCccc
Confidence 9999987654
|
| >d1xk4c1 a.39.1.2 (C:4-86) Calcyclin (S100) {Human (Homo sapiens), s100a9 (mrp14) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100a9 (mrp14) [TaxId: 9606]
Probab=98.17 E-value=4.2e-06 Score=59.42 Aligned_cols=66 Identities=24% Similarity=0.346 Sum_probs=53.2
Q ss_pred HHHHHHHhhhhc-CCC-CCCcCHHHHHHHHHH-cCCC-----CCHHHHHHHHHHhcCCCCCcccHHHHHHHHHh
Q 042823 389 KQKLMEKFREMD-TDN-SDTLTLSELKAGLAK-LGSA-----LEESEVNQYMEAGDIDGNGNIDSIEFVNLMTD 454 (477)
Q Consensus 389 ~~~l~~~F~~~D-~~~-~G~I~~~el~~~l~~-~g~~-----~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~ 454 (477)
+..+..+|..|- ++| .+.++..||+.++.. ++.- -.+..++++++.+|.|+||.|+|+||+.++..
T Consensus 9 i~~ii~vFhkYa~~~G~~~tLsk~Elk~Ll~~El~~~l~~~~~d~~~vd~~m~~LD~n~Dg~vdF~EF~~li~~ 82 (83)
T d1xk4c1 9 IETIINTFHQYSVKLGHPDTLNQGEFKELVRKDLQNFLKKENKNEKVIEHIMEDLDTNADKQLSFEEFIMLMAR 82 (83)
T ss_dssp HHHHHHHHHHHHTTSSSTTSBCHHHHHHHHHHHTTTTTTTGGGCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCcCCCcccCCHHHHHHHHHHHhHHHhcCCCCCHHHHHHHHHHhcCCCCCcCcHHHHHHHHhh
Confidence 457788899885 344 479999999999977 5432 24556899999999999999999999998764
|
| >d1a4pa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), P11 s100a10, calpactin [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), P11 s100a10, calpactin [TaxId: 9606]
Probab=98.17 E-value=8.6e-07 Score=65.16 Aligned_cols=73 Identities=14% Similarity=0.184 Sum_probs=54.5
Q ss_pred hhhHHHHHHhhhcCCCCCCCccHHHHHHHHHhhCCCCCHHHHHHHHHHhhccchHHHHHhcCChHHHHHHHHHhhhhcCC
Q 042823 323 EETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNSSTLESLCENLPTKEKQKLMEKFREMDTD 402 (477)
Q Consensus 323 ~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~F~~~D~~ 402 (477)
.....+..+|..+|.+ +|+|+.+||.+++....... + ....+ ...+.++|+.+|.|
T Consensus 6 ~~ie~l~~~F~~yd~d-dG~is~~El~~~l~~~~~~~--------~------------~~~~~---~~~v~~~~~~~D~n 61 (92)
T d1a4pa_ 6 HAMETMMFTFHKFAGD-KGYLTKEDLRVLMEKEFPGF--------L------------ENQKD---PLAVDKIMKDLDQC 61 (92)
T ss_dssp HHHHHHHHHHHHHHGG-GCSBCHHHHHHHHHHHCHHH--------H------------HHSCC---TTHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHHHcCC-CCEEcHHHHHHHHHHhcccc--------c------------cccCC---HHHHHHHHHHHhCC
Confidence 3466788999999987 89999999999987752100 0 00111 23567788999999
Q ss_pred CCCCcCHHHHHHHHHHc
Q 042823 403 NSDTLTLSELKAGLAKL 419 (477)
Q Consensus 403 ~~G~I~~~el~~~l~~~ 419 (477)
+||.|+.+||..++..+
T Consensus 62 ~DG~I~F~EF~~li~~l 78 (92)
T d1a4pa_ 62 RDGKVGFQSFFSLIAGL 78 (92)
T ss_dssp SSSCBCHHHHHHHHHHH
T ss_pred CCCCCcHHHHHHHHHHH
Confidence 99999999999887654
|
| >d1qjta_ a.39.1.6 (A:) Eps15 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Eps15 homology domain (EH domain) domain: Eps15 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=98.11 E-value=1.5e-06 Score=64.95 Aligned_cols=62 Identities=19% Similarity=0.210 Sum_probs=53.3
Q ss_pred HHHHHhhhcCCCCCCCccHHHHHHHHHhhCCCCCHHHHHHHHHHhhccchHHHHHhcCChHHHHHHHHHhhhhcCCCCCC
Q 042823 327 ALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNSSTLESLCENLPTKEKQKLMEKFREMDTDNSDT 406 (477)
Q Consensus 327 ~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~F~~~D~~~~G~ 406 (477)
.+.+.|..+|.+++|+|+.+|+.+.+++.|. +. +.+.++|+.+|.|++|.
T Consensus 12 ~y~~~F~~~D~d~~G~i~~~e~~~~l~~s~L--~~----------------------------~~L~~i~~~~D~d~dG~ 61 (99)
T d1qjta_ 12 VYEKYYRQVEAGNTGRVLALDAAAFLKKSGL--PD----------------------------LILGKIWDLADTDGKGV 61 (99)
T ss_dssp HHHHHHHHHCCTTSSCCCSHHHHHHHHTSSS--CH----------------------------HHHHHHHHHHCCSSSSS
T ss_pred HHHHHHHHHCCCCCCcccHHHHHHHHHHcCC--cH----------------------------HHHHHHHHHHcCCCCCc
Confidence 4668899999999999999999999988753 22 46778899999999999
Q ss_pred cCHHHHHHHHHH
Q 042823 407 LTLSELKAGLAK 418 (477)
Q Consensus 407 I~~~el~~~l~~ 418 (477)
|+.+||..+|+-
T Consensus 62 L~~~EF~~am~L 73 (99)
T d1qjta_ 62 LSKQEFFVALRL 73 (99)
T ss_dssp CCSHHHHHHHHH
T ss_pred cCHHHHHHHHHH
Confidence 999999988864
|
| >d3c1va1 a.39.1.2 (A:2-94) Calcyclin (S100) {Human (Homo sapiens), s100a4 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100a4 [TaxId: 9606]
Probab=98.03 E-value=8.2e-06 Score=59.88 Aligned_cols=73 Identities=14% Similarity=0.203 Sum_probs=53.3
Q ss_pred hhHHHHHHhhhc-CCCCC-CCccHHHHHHHHHhhCCCCCHHHHHHHHHHhhccchHHHHHhcCChHHHHHHHHHhhhhcC
Q 042823 324 ETQALKEKFIEM-DTDKN-GTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNSSTLESLCENLPTKEKQKLMEKFREMDT 401 (477)
Q Consensus 324 ~~~~l~~~F~~~-D~~~~-G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~F~~~D~ 401 (477)
....+..+|..+ |.+++ |+|+.+||+++++.... .+.. .....+.+.+.|+.+|.
T Consensus 7 ~i~~l~~~F~~ya~~dg~~~~L~~~Elk~~l~~~~~---------------------~~~~--~~~~~~~~~~i~~~~D~ 63 (93)
T d3c1va1 7 ALDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELP---------------------SFLG--KRTDEAAFQKLMSNLDS 63 (93)
T ss_dssp HHHHHHHHHHHHHTSSSSTTEECHHHHHHHHHHHCH---------------------HHHT--TCCSHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHHccCCCCCCeeCHHHHHHHHHHhch---------------------hccc--cCCCHHHHHHHHHHHcC
Confidence 456788899987 66654 47999999999887521 0000 11123467788889999
Q ss_pred CCCCCcCHHHHHHHHHHc
Q 042823 402 DNSDTLTLSELKAGLAKL 419 (477)
Q Consensus 402 ~~~G~I~~~el~~~l~~~ 419 (477)
|+||.|+.+||..++..+
T Consensus 64 n~DG~I~F~EF~~lm~~l 81 (93)
T d3c1va1 64 NRDNEVDFQEYCVFLSCI 81 (93)
T ss_dssp TCSSSEEHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHH
Confidence 999999999999988765
|
| >d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]
Probab=98.03 E-value=9.7e-06 Score=71.92 Aligned_cols=75 Identities=9% Similarity=0.026 Sum_probs=51.8
Q ss_pred cccccCC-eEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCC-CeeEEEEEEEeCCeEEEEEeccC
Q 042823 30 MLGRGQF-GVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQP-NVVEFKSTYEDETAVHVVMELCE 107 (477)
Q Consensus 30 ~iG~G~~-g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hp-niv~~~~~~~~~~~~~lv~e~~~ 107 (477)
.+..|.. +.||++.. .++..+++|...... ...+..|...++.+..+. .+++++.+..+++..++||++++
T Consensus 17 ~~~~G~s~~~v~r~~~-~~~~~~vlK~~~~~~------~~~l~~E~~~l~~L~~~gvpvP~v~~~~~~~~~~~~v~~~i~ 89 (255)
T d1nd4a_ 17 QQTIGCSDAAVFRLSA-QGRPVLFVKTDLSGA------LNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVP 89 (255)
T ss_dssp ECSCTTSSCEEEEEEC-TTSCCEEEEEECSCT------TSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCS
T ss_pred EcCCcccCCeEEEEEe-CCCCEEEEEeCCccC------HhHHHHHHHHHHHHHhcCCCCCceeeecccccceEEEEEeee
Confidence 4555554 68898864 456678889764332 123566777776665432 36778888888889999999999
Q ss_pred CCch
Q 042823 108 GGDL 111 (477)
Q Consensus 108 gg~L 111 (477)
|.++
T Consensus 90 G~~~ 93 (255)
T d1nd4a_ 90 GQDL 93 (255)
T ss_dssp SEET
T ss_pred cccc
Confidence 8765
|
| >d1cb1a_ a.39.1.1 (A:) Calbindin D9K {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calbindin D9K domain: Calbindin D9K species: Pig (Sus scrofa) [TaxId: 9823]
Probab=98.02 E-value=1.3e-06 Score=62.12 Aligned_cols=69 Identities=19% Similarity=0.277 Sum_probs=53.2
Q ss_pred hhhHHHHHHhhhcCC--CCCCCccHHHHHHHHHhhCCC--CCHHHHHHHHHHhhccchHHHHHhcCChHHHHHHHHHhhh
Q 042823 323 EETQALKEKFIEMDT--DKNGTLSYDELRAGLTKVGSM--LTEFDVKHLMEAVKNSSTLESLCENLPTKEKQKLMEKFRE 398 (477)
Q Consensus 323 ~~~~~l~~~F~~~D~--~~~G~i~~~el~~~l~~~~~~--~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~F~~ 398 (477)
.....+..+|..+|. +++|+|+.+||+.+++.+... +++ +.+...|+.
T Consensus 4 ~~~~~l~~~F~~y~~~d~~~g~is~~Elk~ll~~~~~~~~~~~----------------------------~~v~~~~~~ 55 (78)
T d1cb1a_ 4 KSPAELKSIFEKYAAKEGDPNQLSKEELKQLIQAEFPSLLKGP----------------------------RTLDDLFQE 55 (78)
T ss_dssp CCHHHHHHHHHHHHTTSSSTTEECHHHHHHHHHHHCSSCCSSC----------------------------CCSSHHHHH
T ss_pred hhHHHHHHHHHHHccCCCCCCEECHHHHHHHHHHHcCCCCCCH----------------------------HHHHHHHHH
Confidence 446678899999875 345899999999999987322 221 134566888
Q ss_pred hcCCCCCCcCHHHHHHHHHHc
Q 042823 399 MDTDNSDTLTLSELKAGLAKL 419 (477)
Q Consensus 399 ~D~~~~G~I~~~el~~~l~~~ 419 (477)
+|.|+||.|+.+||..++..+
T Consensus 56 ~D~d~dG~Idf~EF~~l~~~l 76 (78)
T d1cb1a_ 56 LDKNGDGEVSFEEFQVLVKKI 76 (78)
T ss_dssp TCCCSSSSEEHHHHHHHHHHH
T ss_pred HcCCCCCcCcHHHHHHHHHHH
Confidence 999999999999999988765
|
| >d2hf5a1 a.39.1.5 (A:81-113) Troponin C {Human (Homo sapiens), cardiac isoform [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Human (Homo sapiens), cardiac isoform [TaxId: 9606]
Probab=97.99 E-value=2e-06 Score=48.88 Aligned_cols=31 Identities=39% Similarity=0.611 Sum_probs=28.6
Q ss_pred HHHHHHhhhcCCCCCCCccHHHHHHHHHhhC
Q 042823 326 QALKEKFIEMDTDKNGTLSYDELRAGLTKVG 356 (477)
Q Consensus 326 ~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~ 356 (477)
..++++|..||.|++|+|+..||..+|+.+|
T Consensus 3 eel~eAF~~FDkDg~G~Is~~EL~~vm~~lG 33 (33)
T d2hf5a1 3 EEIREAFRVFDKDGNGYISAAELRHVMTNLG 33 (33)
T ss_dssp HHHHHHHHHHSSSCCSCBCHHHHHHHTTSCC
T ss_pred HHHHHHHHHhCCCCCCcCcHHHHHHHHHHcC
Confidence 4789999999999999999999999998875
|
| >d1ksoa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100a3 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100a3 [TaxId: 9606]
Probab=97.96 E-value=6.1e-06 Score=60.43 Aligned_cols=74 Identities=20% Similarity=0.146 Sum_probs=55.4
Q ss_pred hhhHHHHHHhhhc-CCCCCC-CccHHHHHHHHHhhCCCCCHHHHHHHHHHhhccchHHHHHhcCChHHHHHHHHHhhhhc
Q 042823 323 EETQALKEKFIEM-DTDKNG-TLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNSSTLESLCENLPTKEKQKLMEKFREMD 400 (477)
Q Consensus 323 ~~~~~l~~~F~~~-D~~~~G-~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~F~~~D 400 (477)
.....+..+|..+ |.+++| +|+.+||++.|+........ .......+.+.++.+|
T Consensus 6 ~~i~~i~~vF~kya~~dGd~~~ls~~Elk~ll~~~~~~~~~-----------------------~~~~~~~~~~~~~~lD 62 (93)
T d1ksoa_ 6 QAVAAIVCTFQEYAGRCGDKYKLCQAELKELLQKELATWTP-----------------------TEFRECDYNKFMSVLD 62 (93)
T ss_dssp HHHHHHHHHHHHHHTSSSCTTCEEHHHHHHHHHHHTTTCCC-----------------------CTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCcCCCCCeECHHHHHHHHHHhhhcccc-----------------------cCCCHHHHHHHHHHHc
Confidence 3456778889876 999999 69999999998876332110 0112346677788899
Q ss_pred CCCCCCcCHHHHHHHHHHc
Q 042823 401 TDNSDTLTLSELKAGLAKL 419 (477)
Q Consensus 401 ~~~~G~I~~~el~~~l~~~ 419 (477)
.|+||.|+.+||..++..+
T Consensus 63 ~n~Dg~IdF~EF~~l~~~l 81 (93)
T d1ksoa_ 63 TNKDCEVDFVEYVRSLACL 81 (93)
T ss_dssp HTTTCEECHHHHHHHHHHH
T ss_pred CCCCCCCcHHHHHHHHHHH
Confidence 9999999999999988764
|
| >d1psra_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), psoriasin s100a7 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), psoriasin s100a7 [TaxId: 9606]
Probab=97.96 E-value=2.3e-06 Score=64.03 Aligned_cols=75 Identities=13% Similarity=0.266 Sum_probs=53.6
Q ss_pred hhhHHHHHHhhhcCCCCCCCccHHHHHHHHHhhCCCCCHHHHHHHHHHhhccchHHHHHhcCChHHHHHHHHHhhhhcCC
Q 042823 323 EETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNSSTLESLCENLPTKEKQKLMEKFREMDTD 402 (477)
Q Consensus 323 ~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~F~~~D~~ 402 (477)
..+..+..+|..++ +++|.|+..||.++++..+... ... .... ....+.++|+.+|.|
T Consensus 7 ~~i~~l~~~F~~y~-~~dG~i~~~El~~ll~~~~~~~--------~~~----------~~~~---~~~~v~~~~~~~D~n 64 (100)
T d1psra_ 7 RSIIGMIDMFHKYT-RRDDKIDKPSLLTMMKENFPNF--------LSA----------CDKK---GTNYLADVFEKKDKN 64 (100)
T ss_dssp HHHHHHHHHHHHTC-CTTSCBCHHHHHHHHHHHCHHH--------HHH----------HHHT---TCCGGGTHHHHHCTT
T ss_pred HHHHHHHHHHHHHc-CCCCcccHHHHHHHHHHHcccc--------ccc----------cccC---CHHHHHHHHHHhcCC
Confidence 34556777888886 7899999999999988763210 000 0001 112456789999999
Q ss_pred CCCCcCHHHHHHHHHHc
Q 042823 403 NSDTLTLSELKAGLAKL 419 (477)
Q Consensus 403 ~~G~I~~~el~~~l~~~ 419 (477)
+||.|+.+||..++..+
T Consensus 65 ~DG~I~F~EF~~li~~l 81 (100)
T d1psra_ 65 EDKKIDFSEFLSLLGDI 81 (100)
T ss_dssp CSSCBCHHHHHHHHHHH
T ss_pred CCCcCcHHHHHHHHHHH
Confidence 99999999999988765
|
| >d1yuta1 a.39.1.2 (A:1-98) Calcyclin (S100) {Human (Homo sapiens), s100a13 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100a13 [TaxId: 9606]
Probab=97.89 E-value=7.8e-06 Score=60.65 Aligned_cols=70 Identities=19% Similarity=0.270 Sum_probs=52.8
Q ss_pred hhHHHHHHhhhc-CCCCC-CCccHHHHHHHHHhhCCCCCHHHHHHHHHHhhccchHHHHHhcCChHHHHHHHHHhhhhcC
Q 042823 324 ETQALKEKFIEM-DTDKN-GTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNSSTLESLCENLPTKEKQKLMEKFREMDT 401 (477)
Q Consensus 324 ~~~~l~~~F~~~-D~~~~-G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~F~~~D~ 401 (477)
.+..+..+|..+ |.+++ |+|+..||.++++..+.... .+ .+.+.+.|+.+|.
T Consensus 12 ~i~~l~~vF~~y~d~dg~~g~is~~El~~~l~~~~~~~~-----------------------~~---~~~v~~l~~~~D~ 65 (98)
T d1yuta1 12 SIETVVTTFFTFARQEGRKDSLSVNEFKELVTQQLPHLL-----------------------KD---VGSLDEKMKSLDV 65 (98)
T ss_dssp HHHHHHHHHHHHHTTSSSSSCBCHHHHHHHHHHHCTTTT-----------------------CC---SSCHHHHHHHHCT
T ss_pred HHHHHHHHHHHHcccCCCCCEEcHHHHHHHHHHhccccC-----------------------CC---HHHHHHHHHHhcC
Confidence 355778889877 77774 99999999999988643211 00 1235677888999
Q ss_pred CCCCCcCHHHHHHHHHHc
Q 042823 402 DNSDTLTLSELKAGLAKL 419 (477)
Q Consensus 402 ~~~G~I~~~el~~~l~~~ 419 (477)
|+||.|+.+||..++..+
T Consensus 66 d~DG~IdF~EF~~l~~~l 83 (98)
T d1yuta1 66 NQDSELKFNEYWRLIGEL 83 (98)
T ss_dssp TCCSCBCHHHHHHHHHHH
T ss_pred CCCCcCCHHHHHHHHHHH
Confidence 999999999999988654
|
| >d1k8ua_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100a6 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100a6 [TaxId: 9606]
Probab=97.70 E-value=2.3e-05 Score=56.74 Aligned_cols=69 Identities=22% Similarity=0.311 Sum_probs=52.4
Q ss_pred hhhHHHHHHhhhc-CCCCCC-CccHHHHHHHHHhh---CCCCCHHHHHHHHHHhhccchHHHHHhcCChHHHHHHHHHhh
Q 042823 323 EETQALKEKFIEM-DTDKNG-TLSYDELRAGLTKV---GSMLTEFDVKHLMEAVKNSSTLESLCENLPTKEKQKLMEKFR 397 (477)
Q Consensus 323 ~~~~~l~~~F~~~-D~~~~G-~i~~~el~~~l~~~---~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~F~ 397 (477)
.....+..+|..+ |.+++| +++..||++.++.. +...+ .+.+.+.++
T Consensus 6 ~ai~~ii~vF~kya~~dg~~~~ls~~Elk~Ll~~e~~~~~~~~----------------------------~~~~~~~~~ 57 (89)
T d1k8ua_ 6 QAIGLLVAIFHKYSGREGDKHTLSKKELKELIQKELTIGSKLQ----------------------------DAEIARLME 57 (89)
T ss_dssp HHHHHHHHHHHHHHTSSSCTTEEEHHHHHHHHHHHSCCGGGTT----------------------------SHHHHHHHH
T ss_pred HHHHHHHHHHHHHcccCCCCCeecHHHHHHHHHHHHHhhccCC----------------------------HHHHHHHHH
Confidence 3456677889877 999998 69999999888763 22221 135667778
Q ss_pred hhcCCCCCCcCHHHHHHHHHHc
Q 042823 398 EMDTDNSDTLTLSELKAGLAKL 419 (477)
Q Consensus 398 ~~D~~~~G~I~~~el~~~l~~~ 419 (477)
.+|.|+||.|+.+||..++..+
T Consensus 58 ~lD~d~Dg~IdF~EF~~l~~~l 79 (89)
T d1k8ua_ 58 DLDRNKDQEVNFQEYVTFLGAL 79 (89)
T ss_dssp HHHHTTTCEEEHHHHHHHHHHH
T ss_pred HhcCCCCCCCcHHHHHHHHHHH
Confidence 8899999999999999887654
|
| >d1tuza_ a.39.1.7 (A:) Diacylglycerol kinase alpha, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: EF-hand modules in multidomain proteins domain: Diacylglycerol kinase alpha, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.67 E-value=1.9e-05 Score=60.63 Aligned_cols=74 Identities=7% Similarity=0.006 Sum_probs=56.8
Q ss_pred CChHHHHHHHHHhhhhc---CCCCCCcCHHHHHHHHHHcCC-C-CCHHHHHHHHHHhcCCCC--------CcccHHHHHH
Q 042823 384 LPTKEKQKLMEKFREMD---TDNSDTLTLSELKAGLAKLGS-A-LEESEVNQYMEAGDIDGN--------GNIDSIEFVN 450 (477)
Q Consensus 384 ~~~~~~~~l~~~F~~~D---~~~~G~I~~~el~~~l~~~g~-~-~~~~~i~~~~~~~d~~~~--------g~i~~~eF~~ 450 (477)
++..+++.+.+.|+... .+.+|.|+.++|+.++..... . .++.-++++++.+|.+++ |.|+|.||+.
T Consensus 22 fs~~ei~~l~~~Fk~~~~~~~~p~g~i~~~~F~~~~~~~f~~~~~~~~l~~rlF~~FD~~~d~~~~~~~~g~I~f~efv~ 101 (118)
T d1tuza_ 22 YSTKKVSDVLKLFEDGEMAKYVQGDAIGYEGFQQFLKIYLEVDNVPRHLSLALFQSFETGHCLNETNVTKDVVCLNDVSC 101 (118)
T ss_dssp HCCCCHHHHHHHHHTSGGGGGEETTEECHHHHHHHHHHHTTCSSCCHHHHHHHHHHSCCCCCTTCCCCCSCCEEHHHHHH
T ss_pred CCHHHHHHHHHHHhccccccCCcccccCHHHHHHHHHHhCCCCCchHHHHHHHHHHHccccccccccCCCceeeHHHHHH
Confidence 45566777777786432 246899999999999987533 2 356788999999999876 8899999999
Q ss_pred HHHhhhC
Q 042823 451 LMTDIYK 457 (477)
Q Consensus 451 ~~~~~~~ 457 (477)
.+.-...
T Consensus 102 ~LS~l~~ 108 (118)
T d1tuza_ 102 YFSLLEG 108 (118)
T ss_dssp HHHHHHS
T ss_pred HHHHHcC
Confidence 8875443
|
| >d1ctda_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=97.55 E-value=6.1e-05 Score=40.66 Aligned_cols=32 Identities=25% Similarity=0.419 Sum_probs=28.0
Q ss_pred hHHHHHHhhhcCCCCCCCccHHHHHHHHHhhC
Q 042823 325 TQALKEKFIEMDTDKNGTLSYDELRAGLTKVG 356 (477)
Q Consensus 325 ~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~ 356 (477)
..++.+.|..||+|.||+|+.+||..+++..|
T Consensus 3 EeELae~FRifDkNaDGyiD~eEl~~ilr~tG 34 (34)
T d1ctda_ 3 EEELANAFRIFDKNADGYIDIEELGEILRATG 34 (34)
T ss_dssp HHHHHHHHHTTCCSSSSCBCHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHccCCcccccHHHHHHHHHhcC
Confidence 45788999999999999999999999887643
|
| >d1xk4a1 a.39.1.2 (A:1-87) Calcyclin (S100) {Human (Homo sapiens), calgranulin s100a8, MRP8 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), calgranulin s100a8, MRP8 [TaxId: 9606]
Probab=97.51 E-value=4.6e-05 Score=54.88 Aligned_cols=68 Identities=15% Similarity=0.191 Sum_probs=50.4
Q ss_pred hhHHHHHHhhhc-CCCCCCC-ccHHHHHHHHHh-hCCCCCHHHHHHHHHHhhccchHHHHHhcCChHHHHHHHHHhhhhc
Q 042823 324 ETQALKEKFIEM-DTDKNGT-LSYDELRAGLTK-VGSMLTEFDVKHLMEAVKNSSTLESLCENLPTKEKQKLMEKFREMD 400 (477)
Q Consensus 324 ~~~~l~~~F~~~-D~~~~G~-i~~~el~~~l~~-~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~F~~~D 400 (477)
....+..+|..+ |.+++|. ++.+||+..+.. ++...+ .+.+.+.++.+|
T Consensus 8 ai~~ii~~F~kya~~dG~~~~l~~~Elk~ll~~e~~~~~~----------------------------~~~v~~i~~~~D 59 (87)
T d1xk4a1 8 ALNSIIDVYHKYSLIKGNFHAVYRDDLKKLLETESPQYIR----------------------------KKGADVWFKELD 59 (87)
T ss_dssp HHHHHHHHHHHHHTSSSCTTCBCHHHHHHHHHHHSCHHHH----------------------------TTCHHHHHHHHC
T ss_pred HHHHHHHHHHHHcccCCCCCccCHHHHHHHHHHhcCCccc----------------------------hHHHHHHHHHhC
Confidence 345677788776 8899885 489999988875 332111 124566788899
Q ss_pred CCCCCCcCHHHHHHHHHHc
Q 042823 401 TDNSDTLTLSELKAGLAKL 419 (477)
Q Consensus 401 ~~~~G~I~~~el~~~l~~~ 419 (477)
.|+||.|+.+||..++..+
T Consensus 60 ~n~DG~IdF~EF~~l~~~l 78 (87)
T d1xk4a1 60 INTDGAVNFQEFLILVIKM 78 (87)
T ss_dssp TTCSSSBCHHHHHHHHHHH
T ss_pred CCCCCcCcHHHHHHHHHHH
Confidence 9999999999999988764
|
| >d1j7qa_ a.39.1.5 (A:) Calcium vector protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium vector protein species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]
Probab=97.47 E-value=0.00057 Score=43.88 Aligned_cols=76 Identities=24% Similarity=0.340 Sum_probs=64.8
Q ss_pred cCChHHHHHHHHHhhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcC-CC-CCcccHHHHHHHHHhhhCC
Q 042823 383 NLPTKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDI-DG-NGNIDSIEFVNLMTDIYKL 458 (477)
Q Consensus 383 ~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~-~~-~g~i~~~eF~~~~~~~~~~ 458 (477)
.+..+++++...+|+.||++..+.-...+-..+|..+|..++..+.+.+++++-- .+ ...|--+||+.++.++...
T Consensus 7 algpeekdecmkifdifdrnaeniapvsdtmdmltklgqtytkreteaimkeargpkgdkknigpeewltlcskwvrq 84 (86)
T d1j7qa_ 7 ALGPEEKDECMKIFDIFDRNAENIAPVSDTMDMLTKLGQTYTKRETEAIMKEARGPKGDKKNIGPEEWLTLCSKWVRQ 84 (86)
T ss_dssp CCSSTHHHHHHHHHHHHSTTTTSCBCHHHHHHHHHHTSCCCSHHHHHHHHHHHHCSSCSSCCBCTTHHHHHHHHHHTC
T ss_pred ccCchhHHHHHHHHHHHhccccccCCcchHHHHHHHhhhHHhHHHHHHHHHHhcCCCCccccCCHHHHHHHHHHHHhc
Confidence 4567788999999999999999999999999999999999999999999998743 22 2358889999998877653
|
| >d1e8aa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), calgranulin C, s100a12 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), calgranulin C, s100a12 [TaxId: 9606]
Probab=97.45 E-value=0.0002 Score=51.26 Aligned_cols=73 Identities=22% Similarity=0.220 Sum_probs=52.2
Q ss_pred hhHHHHHHhhhc-CCCCCC-CccHHHHHHHHHhhCCCCCHHHHHHHHHHhhccchHHHHHhcCChHHHHHHHHHhhhhcC
Q 042823 324 ETQALKEKFIEM-DTDKNG-TLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNSSTLESLCENLPTKEKQKLMEKFREMDT 401 (477)
Q Consensus 324 ~~~~l~~~F~~~-D~~~~G-~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~F~~~D~ 401 (477)
.+..+..+|..+ +.++++ +|+.+||++.+++....... .......+.+.|+.+|.
T Consensus 6 ai~~li~vF~kya~~~g~~~~Lsk~Elk~ll~~e~~~~~~-----------------------~~~~~~~v~~~~~~lD~ 62 (87)
T d1e8aa_ 6 HLEGIVNIFHQYSVRKGHFDTLSKGELKQLLTKELANTIK-----------------------NIKDKAVIDEIFQGLDA 62 (87)
T ss_dssp HHHHHHHHHHHHHTSSSSTTEECHHHHHHHHHHHSTTTST-----------------------TTTSHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHHcccCCCCCeEcHHHHHHHHHHHcccccc-----------------------CCCCHHHHHHHHHHHcC
Confidence 456778889877 455554 79999999998875322110 01123467778888999
Q ss_pred CCCCCcCHHHHHHHHHHc
Q 042823 402 DNSDTLTLSELKAGLAKL 419 (477)
Q Consensus 402 ~~~G~I~~~el~~~l~~~ 419 (477)
|+||.|+.+||..++..+
T Consensus 63 n~Dg~idF~EF~~li~~l 80 (87)
T d1e8aa_ 63 NQDEQVDFQEFISLVAIA 80 (87)
T ss_dssp TCSSCEEHHHHHHHHHHH
T ss_pred CCCCcCCHHHHHHHHHHH
Confidence 999999999999887653
|
| >d1nw1a_ d.144.1.8 (A:) Choline kinase {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Choline kinase domain: Choline kinase species: Caenorhabditis elegans [TaxId: 6239]
Probab=97.16 E-value=0.00047 Score=64.98 Aligned_cols=76 Identities=13% Similarity=0.093 Sum_probs=52.8
Q ss_pred ccccccccCCeEEEEEEEcc-------CCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeE
Q 042823 27 FGRMLGRGQFGVSYLCTENS-------TNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQPNVVEFKSTYEDETAV 99 (477)
Q Consensus 27 ~~~~iG~G~~g~V~~~~~~~-------~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hpniv~~~~~~~~~~~~ 99 (477)
-+++|+.|-.-.+|++.... .++.|.+++... .. ......+|..+++.+..+.-.+++++++.+
T Consensus 46 ~v~~l~GGltN~~y~v~~~~~~~~~~~~~~~vllRi~g~-~~----~~idr~~E~~i~~~ls~~gl~Pkll~~~~~---- 116 (395)
T d1nw1a_ 46 RISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFN-PE----TESHLVAESVIFTLLSERHLGPKLYGIFSG---- 116 (395)
T ss_dssp EEEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECS-CC----CHHHHHHHHHHHHHHHHTTSSSCEEEEETT----
T ss_pred EEEEcCCccccceEEEEeCCCCccccCCCCcEEEEecCC-cc----hhhHHHHHHHHHHHHHhCCCCCeEEEEcCC----
Confidence 35788889999999987643 235677776542 11 123456788888888767666688887753
Q ss_pred EEEEeccCCCch
Q 042823 100 HVVMELCEGGDL 111 (477)
Q Consensus 100 ~lv~e~~~gg~L 111 (477)
.+|+||++|.+|
T Consensus 117 g~I~efi~g~~l 128 (395)
T d1nw1a_ 117 GRLEEYIPSRPL 128 (395)
T ss_dssp EEEECCCCEEEC
T ss_pred ceEEEEeccccC
Confidence 589999998554
|
| >d1tuza_ a.39.1.7 (A:) Diacylglycerol kinase alpha, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: EF-hand modules in multidomain proteins domain: Diacylglycerol kinase alpha, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.98 E-value=0.00034 Score=53.29 Aligned_cols=73 Identities=10% Similarity=0.098 Sum_probs=57.1
Q ss_pred CCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhc------CCCCCcccHHHHHHHHHhhhCCC--cHHHHHHHHHHhcc
Q 042823 402 DNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGD------IDGNGNIDSIEFVNLMTDIYKLE--TPELLEKAFQYLDK 473 (477)
Q Consensus 402 ~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d------~~~~g~i~~~eF~~~~~~~~~~~--~~~~l~~aF~~~D~ 473 (477)
+.++.|++++|..+.+... .++.+|+.+.+.+- ...+|.|++++|..++....+.. ...-....|+.||+
T Consensus 3 ~~~s~l~p~~l~~L~~~T~--fs~~ei~~l~~~Fk~~~~~~~~p~g~i~~~~F~~~~~~~f~~~~~~~~l~~rlF~~FD~ 80 (118)
T d1tuza_ 3 KERGLISPSDFAQLQKYME--YSTKKVSDVLKLFEDGEMAKYVQGDAIGYEGFQQFLKIYLEVDNVPRHLSLALFQSFET 80 (118)
T ss_dssp CCCSCSCHHHHHHHHHHHH--HCCCCHHHHHHHHHTSGGGGGEETTEECHHHHHHHHHHHTTCSSCCHHHHHHHHHHSCC
T ss_pred cccCCCCHHHHHHHHHHcC--CCHHHHHHHHHHHhccccccCCcccccCHHHHHHHHHHhCCCCCchHHHHHHHHHHHcc
Confidence 4577899999999887754 55668888888873 13579999999999998776643 34566789999999
Q ss_pred CCC
Q 042823 474 NSD 476 (477)
Q Consensus 474 d~~ 476 (477)
|+|
T Consensus 81 ~~d 83 (118)
T d1tuza_ 81 GHC 83 (118)
T ss_dssp CCC
T ss_pred ccc
Confidence 987
|
| >d1sraa_ a.39.1.3 (A:) C-terminal (EC) domain of BM-40/SPARC/osteonectin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Osteonectin domain: C-terminal (EC) domain of BM-40/SPARC/osteonectin species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.83 E-value=0.00013 Score=57.42 Aligned_cols=61 Identities=21% Similarity=0.239 Sum_probs=50.9
Q ss_pred HHHHHhhhhcCC-CCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHH
Q 042823 391 KLMEKFREMDTD-NSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMT 453 (477)
Q Consensus 391 ~l~~~F~~~D~~-~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~ 453 (477)
-+...|..+|.| +||.|+..||..+.+.+ .+.+.-+..+++..|.|+||.|++.||..++.
T Consensus 78 ~v~W~F~~LD~n~~D~~L~~~EL~~l~~~L--~~~e~C~~~F~~~CD~n~D~~Is~~EW~~Cf~ 139 (151)
T d1sraa_ 78 PVHWQFGQLDQHPIDGYLSHTELAPLRAPL--IPMEHCTTRFFETCDLDNDKYIALDEWAGCFG 139 (151)
T ss_dssp HHHHHHHHHCCTTCSSEECTTTTGGGGSTT--STTGGGHHHHHHHHCTTCSSSEEHHHHHHHTT
T ss_pred cceeehhhcCCCCCCCccCHHHHHHHHHhh--cCCchHHHHHHHHhcCCCCCcCCHHHHHHHcC
Confidence 455669999999 59999999998854323 34556689999999999999999999999885
|
| >d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: RdoA species: Escherichia coli [TaxId: 562]
Probab=96.62 E-value=0.0041 Score=56.59 Aligned_cols=69 Identities=17% Similarity=0.148 Sum_probs=43.7
Q ss_pred eEEEEEEEccCCceEEEEEeecCCccchhhHHHHHHHHHHHHhccCCC-CeeEEE-----EEEEeCCeEEEEEeccCCCc
Q 042823 37 GVSYLCTENSTNRPYACKSIAKKPKMRLAENDMIRREIQIRLYLSGQP-NVVEFK-----STYEDETAVHVVMELCEGGD 110 (477)
Q Consensus 37 g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~hp-niv~~~-----~~~~~~~~~~lv~e~~~gg~ 110 (477)
-.||++.. .+|..|++|+..... .+...+..|...+..|..+. -++... ..+...+..+.+++++.|..
T Consensus 36 N~vy~v~~-~dg~~~VlK~~rp~~----~s~~~i~~E~~~l~~L~~~gipv~~p~~~~g~~~~~~~~~~~~l~~~~~G~~ 110 (325)
T d1zyla1 36 NRVYQFQD-EDRRRFVVKFYRPER----WTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSVGGRQ 110 (325)
T ss_dssp SEEEEECC-TTCCCEEEEEECTTT----SCHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEECCCCEE
T ss_pred ceeEEEEc-CCCCEEEEEEeCCCC----CCHHHHHHHHHHHHHHHhcCCCCCCceecCCCeeeeeeeEEEEEEeecCCcC
Confidence 58999875 568889999875331 13456777888777775321 111111 12345677899999998743
|
| >d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Homoserine kinase ThrB species: Agrobacterium tumefaciens [TaxId: 358]
Probab=96.05 E-value=0.0058 Score=55.14 Aligned_cols=30 Identities=37% Similarity=0.438 Sum_probs=24.9
Q ss_pred cCCeeccCCCCceeeeecCCCCCEEEeecCCcc
Q 042823 143 MGVMHRDLKPENFSFISRDDNALLKVTDFGSAL 175 (477)
Q Consensus 143 ~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~a~ 175 (477)
.|+||+|+.++||++ +++...-++||+.+.
T Consensus 183 ~giIHgDl~~dNvl~---~~~~v~gvIDF~~~~ 212 (316)
T d2ppqa1 183 AGVIHADLFQDNVFF---LGDELSGLIDFYFAC 212 (316)
T ss_dssp EEEECSCCCGGGEEE---ETTEEEEECCCTTCE
T ss_pred cccccCCcchhhhhc---ccccceeEecccccc
Confidence 579999999999999 555556899999775
|
| >d3cr5x1 a.39.1.2 (X:0-89) Calcyclin (S100) {Cow (Bos taurus), s100b [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Cow (Bos taurus), s100b [TaxId: 9913]
Probab=96.04 E-value=0.015 Score=41.34 Aligned_cols=71 Identities=21% Similarity=0.311 Sum_probs=48.4
Q ss_pred hHHHHHHhhhc-CCCCC-CCccHHHHHHHHHh-hCCCCCHHHHHHHHHHhhccchHHHHHhcCChHHHHHHHHHhhhhcC
Q 042823 325 TQALKEKFIEM-DTDKN-GTLSYDELRAGLTK-VGSMLTEFDVKHLMEAVKNSSTLESLCENLPTKEKQKLMEKFREMDT 401 (477)
Q Consensus 325 ~~~l~~~F~~~-D~~~~-G~i~~~el~~~l~~-~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~F~~~D~ 401 (477)
+..+..+|..+ ..+++ ++++..||++.+++ ++.-+ . .......+.+.|+.+|.
T Consensus 8 i~~ii~vFhkYa~~~G~~~tLsk~Elk~Ll~~El~~~l----------------------~--~~~d~~~~d~~m~~LD~ 63 (90)
T d3cr5x1 8 VVALIDVFHQYSGREGDKHKLKKSELKELINNELSHFL----------------------E--EIKEQEVVDKVMETLDS 63 (90)
T ss_dssp HHHHHHHHHHHHTSSSSTTSBCHHHHHHHHHHHCTTTS----------------------C--CCCSHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHhccCCCcCcCCHHHHHHHHHHHHHHHh----------------------c--CCCCHHHHHHHHHHhcC
Confidence 44667778776 34444 57999999988876 21100 0 01223456778888999
Q ss_pred CCCCCcCHHHHHHHHHHc
Q 042823 402 DNSDTLTLSELKAGLAKL 419 (477)
Q Consensus 402 ~~~G~I~~~el~~~l~~~ 419 (477)
|+||.|+.+|+..++..+
T Consensus 64 n~Dg~vdF~EF~~li~~l 81 (90)
T d3cr5x1 64 DGDGECDFQEFMAFVAMI 81 (90)
T ss_dssp TSSSSBCHHHHHHHHHHH
T ss_pred CCCCcCCHHHHHHHHHHH
Confidence 999999999998887654
|
| >d1qlsa_ a.39.1.2 (A:) Calcyclin (S100) {Pig (Sus scrofa), calgizzarin s100c (s100a11) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Pig (Sus scrofa), calgizzarin s100c (s100a11) [TaxId: 9823]
Probab=95.43 E-value=0.014 Score=41.82 Aligned_cols=72 Identities=21% Similarity=0.265 Sum_probs=48.2
Q ss_pred hHHHHHHhhhcC-CCCC-CCccHHHHHHHHHhhCCCCCHHHHHHHHHHhhccchHHHHHhcCChHHHHHHHHHhhhhcCC
Q 042823 325 TQALKEKFIEMD-TDKN-GTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNSSTLESLCENLPTKEKQKLMEKFREMDTD 402 (477)
Q Consensus 325 ~~~l~~~F~~~D-~~~~-G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~F~~~D~~ 402 (477)
+..+...|..+. .+++ ++++..||++.+++= +..+...- .....+.+.|+.+|.|
T Consensus 8 i~~ii~vFhkYa~~~G~~~tLsk~Elk~Ll~~E---------------------l~~~l~~~--~d~~~vd~im~~LD~n 64 (95)
T d1qlsa_ 8 IESLIAIFQKHAGRDGNNTKISKTEFLIFMNTE---------------------LAAFTQNQ--KDPGVLDRMMKKLDLD 64 (95)
T ss_dssp HHHHHHHHHHHHTTSSCTTCBCHHHHHHHHTTT---------------------SHHHHHHC--CCTHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHhCcCCCcCcCCHHHHHHHHHHH---------------------HHHHhcCC--CCHHHHHHHHHHhcCC
Confidence 445667777653 3444 679999999877641 11111111 1124577888999999
Q ss_pred CCCCcCHHHHHHHHHHc
Q 042823 403 NSDTLTLSELKAGLAKL 419 (477)
Q Consensus 403 ~~G~I~~~el~~~l~~~ 419 (477)
+||.|+.+|+..++..+
T Consensus 65 ~Dg~vdF~EF~~li~~l 81 (95)
T d1qlsa_ 65 SDGQLDFQEFLNLIGGL 81 (95)
T ss_dssp CSSSBCHHHHHHHHHHH
T ss_pred CCCcCcHHHHHHHHHHH
Confidence 99999999998887654
|
| >d1j55a_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100p [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100p [TaxId: 9606]
Probab=95.43 E-value=0.018 Score=41.24 Aligned_cols=71 Identities=18% Similarity=0.311 Sum_probs=46.7
Q ss_pred hHHHHHHhhhcCC-CCC-CCccHHHHHHHHHh-hCCCCCHHHHHHHHHHhhccchHHHHHhcCChHHHHHHHHHhhhhcC
Q 042823 325 TQALKEKFIEMDT-DKN-GTLSYDELRAGLTK-VGSMLTEFDVKHLMEAVKNSSTLESLCENLPTKEKQKLMEKFREMDT 401 (477)
Q Consensus 325 ~~~l~~~F~~~D~-~~~-G~i~~~el~~~l~~-~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~F~~~D~ 401 (477)
+..+..+|..+.. +++ ++++.+||++.+++ ++.-.. .......+.+.|+.+|.
T Consensus 8 i~~ii~vFhkYa~~~g~~~tLsk~Elk~Ll~~El~~~l~------------------------~~~d~~~vd~~m~~LD~ 63 (94)
T d1j55a_ 8 MGMIIDVFSRYSGSEGSTQTLTKGELKVLMEKELPGFLQ------------------------SGKDKDAVDKLLKDLDA 63 (94)
T ss_dssp HHHHHHHHHHHTTSSSCTTEECHHHHHHHHHHHSTTCC------------------------------CHHHHHHHHHCS
T ss_pred HHHHHHHHHHHcccCCCcccCCHHHHHHHHHHHHHHHhc------------------------CCCCHHHHHHHHHHhcC
Confidence 4456677877643 333 58999999988775 221110 01122346677888999
Q ss_pred CCCCCcCHHHHHHHHHHc
Q 042823 402 DNSDTLTLSELKAGLAKL 419 (477)
Q Consensus 402 ~~~G~I~~~el~~~l~~~ 419 (477)
|+||.|+.+|+..++..+
T Consensus 64 n~Dg~vdF~EF~~li~~l 81 (94)
T d1j55a_ 64 NGDAQVDFSEFIVFVAAI 81 (94)
T ss_dssp SSSSSEEHHHHHHHHHHH
T ss_pred CCCCcCCHHHHHHHHHHH
Confidence 999999999998887654
|
| >d1xk4c1 a.39.1.2 (C:4-86) Calcyclin (S100) {Human (Homo sapiens), s100a9 (mrp14) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100a9 (mrp14) [TaxId: 9606]
Probab=95.13 E-value=0.037 Score=38.43 Aligned_cols=69 Identities=17% Similarity=0.276 Sum_probs=46.6
Q ss_pred hHHHHHHhhhcCC-CC-CCCccHHHHHHHHHh-hCCCCCHHHHHHHHHHhhccchHHHHHhcCCh--HHHHHHHHHhhhh
Q 042823 325 TQALKEKFIEMDT-DK-NGTLSYDELRAGLTK-VGSMLTEFDVKHLMEAVKNSSTLESLCENLPT--KEKQKLMEKFREM 399 (477)
Q Consensus 325 ~~~l~~~F~~~D~-~~-~G~i~~~el~~~l~~-~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~--~~~~~l~~~F~~~ 399 (477)
+..+..+|..+.. ++ .++++..||++.++. ++. .+.. .....+.+.|+.+
T Consensus 9 i~~ii~vFhkYa~~~G~~~tLsk~Elk~Ll~~El~~-------------------------~l~~~~~d~~~vd~~m~~L 63 (83)
T d1xk4c1 9 IETIINTFHQYSVKLGHPDTLNQGEFKELVRKDLQN-------------------------FLKKENKNEKVIEHIMEDL 63 (83)
T ss_dssp HHHHHHHHHHHHTTSSSTTSBCHHHHHHHHHHHTTT-------------------------TTTTGGGCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCcCCCcccCCHHHHHHHHHHHhHH-------------------------HhcCCCCCHHHHHHHHHHh
Confidence 3455667776643 22 358999999887765 221 1111 1234567889999
Q ss_pred cCCCCCCcCHHHHHHHHHH
Q 042823 400 DTDNSDTLTLSELKAGLAK 418 (477)
Q Consensus 400 D~~~~G~I~~~el~~~l~~ 418 (477)
|.|+||.|+.+|+..++..
T Consensus 64 D~n~Dg~vdF~EF~~li~~ 82 (83)
T d1xk4c1 64 DTNADKQLSFEEFIMLMAR 82 (83)
T ss_dssp CTTCSSSBCHHHHHHHHHH
T ss_pred cCCCCCcCcHHHHHHHHhh
Confidence 9999999999999887654
|
| >d1qasa1 a.39.1.7 (A:205-298) Phosphoinositide-specific phospholipase C, isozyme D1 (PLC-D!) {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: EF-hand modules in multidomain proteins domain: Phosphoinositide-specific phospholipase C, isozyme D1 (PLC-D!) species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=94.80 E-value=0.036 Score=39.71 Aligned_cols=65 Identities=12% Similarity=0.131 Sum_probs=51.4
Q ss_pred HHHHHHhhhhcCCCCCCcCHHHHHHHHHHc-CC-CCCHHHHHHHHHHhcCCC----CCcccHHHHHHHHHhh
Q 042823 390 QKLMEKFREMDTDNSDTLTLSELKAGLAKL-GS-ALEESEVNQYMEAGDIDG----NGNIDSIEFVNLMTDI 455 (477)
Q Consensus 390 ~~l~~~F~~~D~~~~G~I~~~el~~~l~~~-g~-~~~~~~i~~~~~~~d~~~----~g~i~~~eF~~~~~~~ 455 (477)
.++..+|..+-. +.+.+|.++|...|+.. +. ..+++.+.+++..+.++. .|.+++++|..++...
T Consensus 8 ~ei~~if~~ys~-~~~~mt~~~f~~FL~~eQ~~~~~~~~~~~~ii~~~e~~~~~~~~~~ls~~gF~~fL~S~ 78 (94)
T d1qasa1 8 AEIDRAFEEAAG-SAETLSVERLVTFLQHQQREEEAGPALALSLIERYEPSETAKAQRQMTKDGFLMYLLSA 78 (94)
T ss_dssp HHHHHHHHHHHT-TSSSCBHHHHHHHHHHTSCCTTCSHHHHHHHHHHHCCCHHHHHTTBCCHHHHHHHHHSS
T ss_pred HHHHHHHHHHhC-CCCccCHHHHHHHHHHHcCCccCCHHHHHHHHHHHcccHhhhhcCCcCHHHHHHHHcCc
Confidence 356677777743 45789999999999884 44 578888999999997763 4789999999998754
|
| >d1h8ba_ a.39.1.7 (A:) alpha-Actinin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: EF-hand modules in multidomain proteins domain: alpha-Actinin species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.31 E-value=0.16 Score=33.71 Aligned_cols=57 Identities=14% Similarity=0.265 Sum_probs=44.9
Q ss_pred HHHHHHHhhhhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhcC-----CCCCcccHHHHHHHHH
Q 042823 389 KQKLMEKFREMDTDNSDTLTLSELKAGLAKLGSALEESEVNQYMEAGDI-----DGNGNIDSIEFVNLMT 453 (477)
Q Consensus 389 ~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~~~~~~i~~~~~~~d~-----~~~g~i~~~eF~~~~~ 453 (477)
.+++.++|+.+ .++..+||.+||++. ++.++++-+++.+-. ...|..+|..|+..+-
T Consensus 7 aEqv~~aFr~l-A~~KpyVT~~dL~~~-------L~peqaeyc~~~M~~y~~~~~~~~ayDY~sF~~~l~ 68 (73)
T d1h8ba_ 7 AEQVIASFRIL-ASDKPYILAEELRRE-------LPPDQAQYCIKRMPAYSGPGSVPGALDYAAFSSALY 68 (73)
T ss_dssp HHHHHHHHHHH-TTSCSSBCHHHHHHH-------SCHHHHHHHHHHSCSCCCSSCCTTCBCHHHHHHHHT
T ss_pred HHHHHHHHHHH-hCCCCeeCHHHHHhh-------cCHHHHHHHHHHCcccCCCCCCCCcccHHHHHHHHh
Confidence 46788999988 577999999999874 456778888887753 2367899999998764
|
| >d1sraa_ a.39.1.3 (A:) C-terminal (EC) domain of BM-40/SPARC/osteonectin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Osteonectin domain: C-terminal (EC) domain of BM-40/SPARC/osteonectin species: Human (Homo sapiens) [TaxId: 9606]
Probab=91.89 E-value=0.011 Score=46.06 Aligned_cols=58 Identities=22% Similarity=0.253 Sum_probs=43.2
Q ss_pred HHhhhcCCC-CCCCccHHHHHHHHHhhCCCCCHHHHHHHHHHhhccchHHHHHhcCChHHHHHHHHHhhhhcCCCCCCcC
Q 042823 330 EKFIEMDTD-KNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVKNSSTLESLCENLPTKEKQKLMEKFREMDTDNSDTLT 408 (477)
Q Consensus 330 ~~F~~~D~~-~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~F~~~D~~~~G~I~ 408 (477)
=.|..+|.| +||.++..||....+.+ .+. ...++.-|+..|.|+||.||
T Consensus 81 W~F~~LD~n~~D~~L~~~EL~~l~~~L--~~~----------------------------e~C~~~F~~~CD~n~D~~Is 130 (151)
T d1sraa_ 81 WQFGQLDQHPIDGYLSHTELAPLRAPL--IPM----------------------------EHCTTRFFETCDLDNDKYIA 130 (151)
T ss_dssp HHHHHHCCTTCSSEECTTTTGGGGSTT--STT----------------------------GGGHHHHHHHHCTTCSSSEE
T ss_pred eehhhcCCCCCCCccCHHHHHHHHHhh--cCC----------------------------chHHHHHHHHhcCCCCCcCC
Confidence 359999999 69999999987532222 111 12455668889999999999
Q ss_pred HHHHHHHHH
Q 042823 409 LSELKAGLA 417 (477)
Q Consensus 409 ~~el~~~l~ 417 (477)
..|...+|.
T Consensus 131 ~~EW~~Cf~ 139 (151)
T d1sraa_ 131 LDEWAGCFG 139 (151)
T ss_dssp HHHHHHHTT
T ss_pred HHHHHHHcC
Confidence 999998873
|
| >d1pula1 a.39.1.11 (A:18-120) Hypothetical protein c32e8.3 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: p25-alpha domain: Hypothetical protein c32e8.3 species: Caenorhabditis elegans [TaxId: 6239]
Probab=91.47 E-value=1.5 Score=31.16 Aligned_cols=68 Identities=10% Similarity=0.056 Sum_probs=52.9
Q ss_pred hHHHHHHHHHhhhhcCCCCCCcCHHHHHHHHHHcC----CCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHh
Q 042823 386 TKEKQKLMEKFREMDTDNSDTLTLSELKAGLAKLG----SALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTD 454 (477)
Q Consensus 386 ~~~~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g----~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~ 454 (477)
..+.+..-++|..|-.-..-.++...+..+++.+| ..+|...++-++..+-..+ .+|+|++|..++..
T Consensus 4 ~~~l~~~F~aF~~FG~~~~~em~~~~f~Kl~kdc~lid~K~~T~tdvDIiF~K~k~k~-~ri~f~~F~~aL~~ 75 (103)
T d1pula1 4 DADVKKRWDAFTKFGAATATEMTGKNFDKWLKDAGVLDNKAITGTMTGIAFSKVTGPK-KKATFDETKKVLAF 75 (103)
T ss_dssp HHHHHHHHHHHHHHTCSSSSCCCHHHHHHHHHHHTSCCSSSSCHHHHHHHHHHHTCSS-SCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCCcCCCHHHHHHHHHHcCCCcCCCCCccchhhhhHhhcCCC-CCcCHHHHHHHHHH
Confidence 44566677788888643334699999999999854 4699999999999986554 56999999998864
|
| >d1j7qa_ a.39.1.5 (A:) Calcium vector protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium vector protein species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]
Probab=88.15 E-value=1.4 Score=27.75 Aligned_cols=53 Identities=21% Similarity=0.266 Sum_probs=47.0
Q ss_pred CCchhhHHHHHHhhhcCCCCCCCccHHHHHHHHHhhCCCCCHHHHHHHHHHhh
Q 042823 320 LPDEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKHLMEAVK 372 (477)
Q Consensus 320 ~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d 372 (477)
+-+++..+-..+|..||.+...--...+-..+|.++|...+..+.+.+|++..
T Consensus 8 lgpeekdecmkifdifdrnaeniapvsdtmdmltklgqtytkreteaimkear 60 (86)
T d1j7qa_ 8 LGPEEKDECMKIFDIFDRNAENIAPVSDTMDMLTKLGQTYTKRETEAIMKEAR 60 (86)
T ss_dssp CSSTHHHHHHHHHHHHSTTTTSCBCHHHHHHHHHHTSCCCSHHHHHHHHHHHH
T ss_pred cCchhHHHHHHHHHHHhccccccCCcchHHHHHHHhhhHHhHHHHHHHHHHhc
Confidence 45566777788999999999998899999999999999999999999999875
|
| >d1dava_ a.139.1.1 (A:) Cellulosome endoglucanase SS {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Type I dockerin domain superfamily: Type I dockerin domain family: Type I dockerin domain domain: Cellulosome endoglucanase SS species: Clostridium thermocellum [TaxId: 1515]
Probab=85.21 E-value=0.11 Score=34.66 Aligned_cols=52 Identities=15% Similarity=0.220 Sum_probs=39.2
Q ss_pred cCCCCCCcCHHHHHHHHHHc-CCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhhh
Q 042823 400 DTDNSDTLTLSELKAGLAKL-GSALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDIY 456 (477)
Q Consensus 400 D~~~~G~I~~~el~~~l~~~-g~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~~ 456 (477)
|.|++|.|+..++..+++.+ |.. +..+ ...+|.|+||.|+..++..+.....
T Consensus 8 DvN~DG~Vd~~D~~~~~~~i~~~~-~~~~----~~~aDvn~DG~Id~~D~~~l~~~il 60 (71)
T d1dava_ 8 DVNDDGKVNSTDAVALKRYVLRSG-ISIN----TDNADLNEDGRVNSTDLGILKRYIL 60 (71)
T ss_dssp CSSSSSBSSGGGHHHHHHHHHCSC-SCCC----GGGTCSSSSSSCSSHHHHHHHHHTT
T ss_pred ccCCCCCCcHHHHHHHHHHHcCCC-CcCC----CcceecCCCCCcCHHHHHHHHHHHH
Confidence 78999999999998888774 432 2212 2358999999999999988776543
|
| >d1wlma1 a.39.1.11 (A:8-145) Protein cgi-38 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: p25-alpha domain: Protein cgi-38 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=84.79 E-value=4.1 Score=30.60 Aligned_cols=65 Identities=12% Similarity=0.113 Sum_probs=48.6
Q ss_pred HHHHHhhhhcCC-CCC-CcCHHHHHHHHHHcC----CCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhh
Q 042823 391 KLMEKFREMDTD-NSD-TLTLSELKAGLAKLG----SALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDI 455 (477)
Q Consensus 391 ~l~~~F~~~D~~-~~G-~I~~~el~~~l~~~g----~~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~ 455 (477)
..-.+|..|..- .+| .++...+..+++.++ ..++..+++-+|..+-..+...|+|++|+.++...
T Consensus 12 ~~F~~F~~fG~~k~~~~~m~~~~f~K~~kd~~lid~K~~T~t~~diiF~k~k~k~~r~i~f~~F~~aL~~i 82 (138)
T d1wlma1 12 ESFRKFAIHGDPKASGQEMNGKNWAKLCKDCKVADGKAVTGTDVDIVFSKVKAKSARVINYEEFKKALEEL 82 (138)
T ss_dssp HHHHHHHTSSCSSCCSSEEEHHHHHHHHHHTSCCCSSSSCHHHHHHHHHHHSCSSCSEEEHHHHHHHHHHT
T ss_pred HHHHHHHhcCCCCCCcccCCHHHHHHHHHHcCCCcCCccchhhHHHHHHHhhcCCCcccCHHHHHHHHHHH
Confidence 334445555431 232 499999999999964 35899999999999877777889999999888653
|
| >d2cclb1 a.139.1.1 (B:1-59) Endo-1,4-beta-xylanase Y {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Type I dockerin domain superfamily: Type I dockerin domain family: Type I dockerin domain domain: Endo-1,4-beta-xylanase Y species: Clostridium thermocellum [TaxId: 1515]
Probab=84.71 E-value=1.1 Score=28.33 Aligned_cols=51 Identities=22% Similarity=0.347 Sum_probs=39.5
Q ss_pred cCCCCCCcCHHHHHHHHHH-cCC-CCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHh
Q 042823 400 DTDNSDTLTLSELKAGLAK-LGS-ALEESEVNQYMEAGDIDGNGNIDSIEFVNLMTD 454 (477)
Q Consensus 400 D~~~~G~I~~~el~~~l~~-~g~-~~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~ 454 (477)
|-|++|.|+.-++..+..- +|. .+++.+ +..+|.|+||.|+..+...+...
T Consensus 2 DvN~Dg~vni~D~~~l~~~il~~~~~~~~~----~~aaDvn~Dg~i~i~D~~~l~~~ 54 (59)
T d2cclb1 2 DVNGDGTINSTDLTMLKRSVLRAITLTDDA----KARADVDKNGSINAADVLLLSRY 54 (59)
T ss_dssp CTTCSSSCCHHHHHHHHHHHTTSSCCCHHH----HHHHCTTCSSCCSHHHHHHHHHH
T ss_pred CCCCCCCCcHHHHHHHHHHHhCCCCCChhh----hhccccCCCCCCCHHHHHHHHHH
Confidence 6799999999999888765 343 344432 46789999999999998877654
|
| >d1eg3a2 a.39.1.7 (A:210-306) Dystrophin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: EF-hand modules in multidomain proteins domain: Dystrophin species: Human (Homo sapiens) [TaxId: 9606]
Probab=83.68 E-value=4.1 Score=28.32 Aligned_cols=64 Identities=17% Similarity=0.211 Sum_probs=48.2
Q ss_pred HHHHHHHhhhhcCCCCCCcCHHHHHHHHHH-------cCCC------CCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhh
Q 042823 389 KQKLMEKFREMDTDNSDTLTLSELKAGLAK-------LGSA------LEESEVNQYMEAGDIDGNGNIDSIEFVNLMTDI 455 (477)
Q Consensus 389 ~~~l~~~F~~~D~~~~G~I~~~el~~~l~~-------~g~~------~~~~~i~~~~~~~d~~~~g~i~~~eF~~~~~~~ 455 (477)
.++++-.|+.+ .|.+|.++..-|...|+. +|+. .-+..++..|...- +...|+-++|+..+..-
T Consensus 3 ~dKyRYlF~qi-sd~~g~~~~~kl~~lL~d~lqlP~~vgE~~sFG~s~ie~sv~sCF~~~~--~~~~i~~~~FL~wl~~e 79 (97)
T d1eg3a2 3 EDKYRYLFKQV-ASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFAN--NKPEIEAALFLDWMRLE 79 (97)
T ss_dssp HHHHHHHHHHH-SCTTSCBCHHHHHHHHHHHHHHHHHTTCGGGGTCSCCHHHHHHHHHHTT--TCSCBCHHHHHHHHHTC
T ss_pred HHHHHHHHHHH-hCCCCCCcHHHHHHHHHHHHHHHHHhCcccccCCCcchHHHHHHHhccC--CCCcccHHHHHHHHHhC
Confidence 46788899998 699999999888877755 3542 23677888886543 44579999999998754
|