Citrus Sinensis ID: 042825
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 631 | 2.2.26 [Sep-21-2011] | |||||||
| P43298 | 942 | Probable receptor protein | yes | no | 0.816 | 0.546 | 0.368 | 3e-85 | |
| Q9LFS4 | 638 | Protein NSP-INTERACTING K | no | no | 0.738 | 0.730 | 0.261 | 5e-40 | |
| Q8RY65 | 635 | Protein NSP-INTERACTING K | no | no | 0.695 | 0.691 | 0.260 | 3e-35 | |
| Q9LX66 | 830 | Receptor-like protein kin | no | no | 0.431 | 0.327 | 0.309 | 2e-32 | |
| Q9SHI2 | 1101 | Leucine-rich repeat recep | no | no | 0.787 | 0.451 | 0.258 | 3e-32 | |
| Q42371 | 976 | LRR receptor-like serine/ | no | no | 0.740 | 0.478 | 0.260 | 6e-32 | |
| O04086 | 625 | Probable receptor-like pr | no | no | 0.432 | 0.436 | 0.302 | 2e-29 | |
| Q9LK03 | 717 | Proline-rich receptor-lik | no | no | 0.321 | 0.283 | 0.320 | 5e-29 | |
| Q9LV48 | 652 | Proline-rich receptor-lik | no | no | 0.264 | 0.256 | 0.357 | 1e-28 | |
| Q1PEM5 | 513 | Proline-rich receptor-lik | no | no | 0.342 | 0.421 | 0.320 | 2e-28 |
| >sp|P43298|TMK1_ARATH Probable receptor protein kinase TMK1 OS=Arabidopsis thaliana GN=TMK1 PE=2 SV=1 | Back alignment and function desciption |
|---|
Score = 316 bits (810), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 244/662 (36%), Positives = 324/662 (48%), Gaps = 147/662 (22%)
Query: 98 QVTNIELQDQNRKGTVPPILKKLSSMAVMYLENNQLRGPIPSLVG--SLEFFSAYEANIS 155
QV ++ L Q G + +L+ ++ + ++L +N+ GP+P G LE S + + +
Sbjct: 210 QVQSLWLNGQKLTGDIT-VLQNMTGLKEVWLHSNKFSGPLPDFSGLKELESLSLRDNSFT 268
Query: 156 GTIPDFIGTDTFPQLSYLDLGNNNLQGTIP---SSFGMPFADISNLSTLEDLSLGHNKLT 212
G +P + + L ++L NN+LQG +P SS + SN L ++
Sbjct: 269 GPVPASL--LSLESLKVVNLTNNHLQGPVPVFKSSVSVDLDKDSNSFCLSSPGECDPRVK 326
Query: 213 GIFPV-SSFNNHPKLTTLNLTNNLLQGPTPRFN-------NSKLTVDMRTGSNCFCLDDP 264
+ + SSF+ P+L +G P N N +TV P
Sbjct: 327 SLLLIASSFDYPPRLA------ESWKGNDPCTNWIGIACSNGNITVISLEKMELTGTISP 380
Query: 265 GL-ACDSRVNILLSIAESMGY-PEVLAESRKGNDPCPTYKYWKGISCDIGGNI---TENV 319
A S I+L I G P+ L P K S + G + NV
Sbjct: 381 EFGAIKSLQRIILGINNLTGMIPQELTT-------LPNLKTLDVSSNKLFGKVPGFRSNV 433
Query: 320 VVITDGNPDVEKESNSP-----------------GSPPGSGSKIQ-ILGITLGSVIGDFC 361
VV T+GNPD+ K+ +S G G K +GI +GSV+G
Sbjct: 434 VVNTNGNPDIGKDKSSLSSPGSSSPSGGSGSGINGDKDRRGMKSSTFIGIIVGSVLGGLL 493
Query: 362 GLFVVGLGVFLYIRNKKS----SETVPIQVLRPR------------ICGISV-------- 397
+F++GL VF + + ++ SE+ V+ PR + G SV
Sbjct: 494 SIFLIGLLVFCWYKKRQKRFSGSESSNAVVVHPRHSGSDNESVKITVAGSSVSVGGISDT 553
Query: 398 ------------VHSVDFGDMAIPIQVLRNATNNFSEENRLGRGGVGTVYKGELKDGTEV 445
+ V+ G+M I IQVLR+ TNNFS +N LG GG G VYKGEL DGT++
Sbjct: 554 YTLPGTSEVGDNIQMVEAGNMLISIQVLRSVTNNFSSDNILGSGGFGVVYKGELHDGTKI 613
Query: 446 GVKRMELGSVTEQGIAQFESEITVLTK----------------------------GTLGR 477
VKRME G + +G A+F+SEI VLTK GTL R
Sbjct: 614 AVKRMENGVIAGKGFAEFKSEIAVLTKVRHRHLVTLLGYCLDGNEKLLVYEYMPQGTLSR 673
Query: 478 HLFNWEEEGLEPLEWNTRLNIALDVAR-------------------------GDDMR--V 510
HLF W EEGL+PL W RL +ALDVAR GDDMR V
Sbjct: 674 HLFEWSEEGLKPLLWKQRLTLALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKV 733
Query: 511 ADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKV 570
ADFGLVRL PE GK SI T++AGTFGYLAPEY VTGR+T KVDVYSFG+ILM+LITGRK
Sbjct: 734 ADFGLVRLAPE-GKGSIETRIAGTFGYLAPEYAVTGRVTTKVDVYSFGVILMELITGRKS 792
Query: 571 VDATHSDPEYIIHLATWFQKMHKNHD-TFQMAIDKTIQLDEENLANVSTVAELGDHCCAN 629
+D S PE IHL +WF++M+ N + +F+ AID TI LDEE LA+V TVAEL HCCA
Sbjct: 793 LD--ESQPEESIHLVSWFKRMYINKEASFKKAIDTTIDLDEETLASVHTVAELAGHCCAR 850
Query: 630 EP 631
EP
Sbjct: 851 EP 852
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Probable receptor. Arabidopsis thaliana (taxid: 3702) EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1 |
| >sp|Q9LFS4|NIK1_ARATH Protein NSP-INTERACTING KINASE 1 OS=Arabidopsis thaliana GN=NIK1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 166 bits (420), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 162/620 (26%), Positives = 260/620 (41%), Gaps = 154/620 (24%)
Query: 61 DAAVMQDLKASFVIPKRL--KWSDP--DPCQWSHVICSDDGQVTNIELQDQNRKGTVPPI 116
+ + D+KAS P + W DPC W+ V CS + V + QN GT+ P
Sbjct: 41 EVQALMDIKASLHDPHGVLDNWDRDAVDPCSWTMVTCSSENFVIGLGTPSQNLSGTLSPS 100
Query: 117 LKKLSSMAVMYLENNQLRGPIPSLVGSLEFFSAYEANISGTIPDFIGTDTFPQLSYLDLG 176
+ L+++ ++ L+NN ++G IP+ +G L +L LDL
Sbjct: 101 ITNLTNLRIVLLQNNNIKGKIPAEIGRL-----------------------TRLETLDLS 137
Query: 177 NNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNNLL 236
+N G IP S G L +L+ L L +N L+G+FP+S +N +L L+L+ N L
Sbjct: 138 DNFFHGEIPFSVGY-------LQSLQYLRLNNNSLSGVFPLS-LSNMTQLAFLDLSYNNL 189
Query: 237 QGPTPRFNNSKLTVDMRTGSNCFCLDDPGLACDSRVNILLSIAESMGYPEVLAESRKGND 296
GP PRF ++ G+ C C+ I +S+
Sbjct: 190 SGPVPRFAAKTFSI---VGNPLICPTGTEPDCNGTTLIPMSM------------------ 228
Query: 297 PCPTYKYWKGISCDIGGNITENVVVITDGNPDVEKESNSPGSPPGSGSKIQILGITLGSV 356
N+ + V + G K + + GS G+ S
Sbjct: 229 -----------------NLNQTGVPLYAGGSRNHKMAIAVGSSVGTVS------------ 259
Query: 357 IGDFCGLFVVGLGVFLYIRNKKSSETVPIQVLRPRICGISVVHSVDFGDMAIPIQVLRNA 416
L + +G+FL+ R + + T +S+ + FG + L+ A
Sbjct: 260 ------LIFIAVGLFLWWRQRHNQNTFFDVKDGNHHEEVSLGNLRRFG-----FRELQIA 308
Query: 417 TNNFSEENRLGRGGVGTVYKGELKDGTEVGVKRMELGSVTEQGIAQFESEITVLTKGT-- 474
TNNFS +N LG+GG G VYKG L D T V VKR++ G G QF++E+ +++
Sbjct: 309 TNNFSSKNLLGKGGYGNVYKGILGDSTVVAVKRLKDGGAL-GGEIQFQTEVEMISLAVHR 367
Query: 475 -----LGRHLFNWEEEGLEP----------------LEWNTRLNIALDVARG-------- 505
G + E+ + P L+W+ R IA+ ARG
Sbjct: 368 NLLRLYGFCITQTEKLLVYPYMSNGSVASRMKAKPVLDWSIRKRIAIGAARGLVYLHEQC 427
Query: 506 ----------------DDM---RVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTG 546
DD V DFGL +L+ H + T V GT G++APEY+ TG
Sbjct: 428 DPKIIHRDVKAANILLDDYCEAVVGDFGLAKLLDHQDSH-VTTAVRGTVGHIAPEYLSTG 486
Query: 547 RITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQKMHKNHDTFQMAIDKTI 606
+ + K DV+ FG++L++L+TG++ + + + + L W +K+H+ ++ +DK +
Sbjct: 487 QSSEKTDVFGFGILLLELVTGQRAFEFGKAANQKGVML-DWVKKIHQ-EKKLELLVDKEL 544
Query: 607 ----QLDEENLANVSTVAEL 622
DE L + VA L
Sbjct: 545 LKKKSYDEIELDEMVRVALL 564
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Involved in defense response to geminivirus infection via regulation of the nuclear trafficking of RPL10A. Phosphorylates RPL10A in vitro. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q8RY65|NIK2_ARATH Protein NSP-INTERACTING KINASE 2 OS=Arabidopsis thaliana GN=NIK2 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 150 bits (379), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 156/598 (26%), Positives = 252/598 (42%), Gaps = 159/598 (26%)
Query: 68 LKASFVIPK--RLKWSDP--DPCQWSHVICSDDGQVTNIELQDQNRKGTVPPILKKLSSM 123
+K+S P + W D DPC W+ + CSD G V +E QN GT+ + L+++
Sbjct: 49 IKSSLTDPHGVLMNWDDTAVDPCSWNMITCSD-GFVIRLEAPSQNLSGTLSSSIGNLTNL 107
Query: 124 AVMYLENNQLRGPIPSLVGSLEFFSAYEANISGTIPDFIGTDTFPQLSYLDLGNNNLQGT 183
+ L+NN + G IP +G L +L LDL NN G
Sbjct: 108 QTVLLQNNYITGNIPHEIGKL-----------------------MKLKTLDLSTNNFTGQ 144
Query: 184 IPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNNLLQGPTPRF 243
IP F + ++ L+ L + +N LTG P SS N +LT L+L+ N L GP PR
Sbjct: 145 IP--FTLSYS-----KNLQYLRVNNNSLTGTIP-SSLANMTQLTFLDLSYNNLSGPVPR- 195
Query: 244 NNSKLTVDMRTGSNCFCLDDPGLACDSRVNILLSIAESMGYPEVLAESRKGNDPCPTYKY 303
S+A++ V+ S+ CPT
Sbjct: 196 ---------------------------------SLAKTF---NVMGNSQ----ICPT--- 212
Query: 304 WKGISCDIGGNITENVVVITDGNPDVEKESNSPGSPPGSGSKIQILGITLGSVIGDFCGL 363
G D G T P ++S G+K + + + G + C L
Sbjct: 213 --GTEKDCNG---------TQPKPMSITLNSSQNKSSDGGTKNRKIAVVFGVSLTCVC-L 260
Query: 364 FVVGLGVFLYIRNKKSSETVPIQV---LRPRICGISVVHSVDFGDMAIPIQVLRNATNNF 420
++G G L+ R + + + + + + +C + + +F + L++AT+NF
Sbjct: 261 LIIGFGFLLWWRRRHNKQVLFFDINEQNKEEMC-LGNLRRFNFKE-------LQSATSNF 312
Query: 421 SEENRLGRGGVGTVYKGELKDGTEVGVKRMELGSVTEQGIAQFESEITVLTKGTLGRHLF 480
S +N +G+GG G VYKG L DG+ + VKR++ G QF++E+ +++ + R+L
Sbjct: 313 SSKNLVGKGGFGNVYKGCLHDGSIIAVKRLK-DINNGGGEVQFQTELEMISLA-VHRNLL 370
Query: 481 NW--------EEEGLEP----------------LEWNTRLNIALDVARG----------- 505
E + P L+W TR IAL RG
Sbjct: 371 RLYGFCTTSSERLLVYPYMSNGSVASRLKAKPVLDWGTRKRIALGAGRGLLYLHEQCDPK 430
Query: 506 -------------DDM---RVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRIT 549
DD V DFGL +L+ H + T V GT G++APEY+ TG+ +
Sbjct: 431 IIHRDVKAANILLDDYFEAVVGDFGLAKLLDHEESH-VTTAVRGTVGHIAPEYLSTGQSS 489
Query: 550 AKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQKMHKNHDTFQMAIDKTIQ 607
K DV+ FG++L++LITG + ++ + + L W +K+ + Q+ +DK ++
Sbjct: 490 EKTDVFGFGILLLELITGLRALEFGKAANQRGAIL-DWVKKLQQEKKLEQI-VDKDLK 545
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Involved in defense response to geminivirus infection (By similarity). Phosphorylates RPL10A in vitro. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q9LX66|HERK_ARATH Receptor-like protein kinase HERK 1 OS=Arabidopsis thaliana GN=HERK1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 140 bits (354), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 107/346 (30%), Positives = 159/346 (45%), Gaps = 74/346 (21%)
Query: 349 LGITLGSVIGDFCGLFVVGLGVFLYIRNKKSSETVPIQVLRPRICGISVVHSVDFG---- 404
LG+ +GS IG + +G LY + K+ + + I G S+ G
Sbjct: 404 LGLIVGSAIGSLLAVVFLGSCFVLYKKRKRGQDGHSKTWMPFSINGTSMGSKYSNGTTLT 463
Query: 405 ------DMAIPIQVLRNATNNFSEENRLGRGGVGTVYKGELKDGTEVGVKRMELGSVTEQ 458
+ IP +++ATNNF E +G GG G VYKGEL DGT+V VKR S +Q
Sbjct: 464 SITTNANYRIPFAAVKDATNNFDESRNIGVGGFGKVYKGELNDGTKVAVKRGNPKS--QQ 521
Query: 459 GIAQFESEITVLTK----------------------------GTLGRHLFNWEEEGLEPL 490
G+A+F +EI +L++ GT+ HL+ GL L
Sbjct: 522 GLAEFRTEIEMLSQFRHRHLVSLIGYCDENNEMILIYEYMENGTVKSHLYG---SGLPSL 578
Query: 491 EWNTRLNIALDVARG------------------------DD---MRVADFGLVRLVPENG 523
W RL I + ARG D+ +VADFGL + PE
Sbjct: 579 TWKQRLEICIGAARGLHYLHTGDSKPVIHRDVKSANILLDENFMAKVADFGLSKTGPELD 638
Query: 524 KHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIH 583
+ + T V G+FGYL PEY ++T K DVYSFG++L +++ R V+D T P +++
Sbjct: 639 QTHVSTAVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLFEVLCARPVIDPTL--PREMVN 696
Query: 584 LATWFQKMHKNHDTFQMAIDKTIQLDEENLANVSTVAELGDHCCAN 629
LA W K K Q+ ID++++ + ++ AE G+ C A+
Sbjct: 697 LAEWAMKWQKKGQLDQI-IDQSLRGNIRP-DSLRKFAETGEKCLAD 740
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Receptor-like protein kinase required for cell elongation during vegetative growth, mostly in a brassinosteroid-(BR-) independent manner. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: - |
| >sp|Q9SHI2|Y1723_ARATH Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 OS=Arabidopsis thaliana GN=At1g17230 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 140 bits (354), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 158/612 (25%), Positives = 255/612 (41%), Gaps = 115/612 (18%)
Query: 92 ICSDDGQVTNIE---LQDQNRKGTVPPILKKLSSMAVMYLENNQLRGPIPSLVGS---LE 145
I +D G++ N+E L + N G +PP + L+ + + +NQL G IP +GS ++
Sbjct: 491 ISADLGKLKNLERLRLANNNFTGEIPPEIGNLTKIVGFNISSNQLTGHIPKELGSCVTIQ 550
Query: 146 FFSAYEANISGTIPDFIGTDTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLS 205
SG I +G + L L L +N L G IP SFG +L+ L +L
Sbjct: 551 RLDLSGNKFSGYIAQELGQLVY--LEILRLSDNRLTGEIPHSFG-------DLTRLMELQ 601
Query: 206 LGHNKLTGIFPVSSFNNHPKLTTLNLTNNLLQGPTP-RFNNSKLTVDMRTGSNCFCLDDP 264
LG N L+ PV +LN+++N L G P N ++ + N + P
Sbjct: 602 LGGNLLSENIPVELGKLTSLQISLNISHNNLSGTIPDSLGNLQMLEILYLNDNKLSGEIP 661
Query: 265 G--------LACD-SRVNILLSIAESMGYPEVLAESRKGNDPCPTYKYWKGISCDIGGNI 315
L C+ S N++ ++ ++ + + + + GN C+ +
Sbjct: 662 ASIGNLMSLLICNISNNNLVGTVPDTAVFQRMDSSNFAGNHGL----------CNSQRSH 711
Query: 316 TENVVVITDGNPDVEKESNSPGSPPGSGSKIQILGITLGSVIGDFCGLFVVGLGVFLYIR 375
+ +V P + + N + + I I +GSV + LG+ I+
Sbjct: 712 CQPLV------PHSDSKLNWLINGSQRQKILTITCIVIGSV------FLITFLGLCWTIK 759
Query: 376 NKKSSETVPIQVLRPRICGISVVHSVDFGDMAIPIQVLRNATNNFSEENRLGRGGVGTVY 435
++ + +P V+ S F Q L +AT NFSE+ LGRG GTVY
Sbjct: 760 RREPAFVALEDQTKP-----DVMDSYYFPKKGFTYQGLVDATRNFSEDVVLGRGACGTVY 814
Query: 436 KGELKDGTEVGVKRMELGSVTEQGIAQFESEITVL------------------------- 470
K E+ G + VK++ F +EI+ L
Sbjct: 815 KAEMSGGEVIAVKKLNSRGEGASSDNSFRAEISTLGKIRHRNIVKLYGFCYHQNSNLLLY 874
Query: 471 ---TKGTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG-----DDMR------------- 509
+KG+LG L E+ L L+WN R IAL A G D R
Sbjct: 875 EYMSKGSLGEQLQRGEKNCL--LDWNARYRIALGAAEGLCYLHHDCRPQIVHRDIKSNNI 932
Query: 510 ---------VADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMI 560
V DFGL +L+ + S ++ VAG++GY+APEY T ++T K D+YSFG++
Sbjct: 933 LLDERFQAHVGDFGLAKLIDLSYSKS-MSAVAGSYGYIAPEYAYTMKVTEKCDIYSFGVV 991
Query: 561 LMDLITGRKVVDATHSDPEYIIHLATWFQKMHKNH-DTFQMAIDKTIQLDEENLANVSTV 619
L++LITG+ V + L W ++ +N T +M + D+ + +S V
Sbjct: 992 LLELITGKPPVQPLEQGGD----LVNWVRRSIRNMIPTIEMFDARLDTNDKRTVHEMSLV 1047
Query: 620 AELGDHCCANEP 631
++ C +N P
Sbjct: 1048 LKIALFCTSNSP 1059
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Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q42371|ERECT_ARATH LRR receptor-like serine/threonine-protein kinase ERECTA OS=Arabidopsis thaliana GN=ERECTA PE=1 SV=1 | Back alignment and function description |
|---|
Score = 139 bits (350), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 164/629 (26%), Positives = 260/629 (41%), Gaps = 162/629 (25%)
Query: 102 IELQDQNRKGTVPPILKKLSSMAVMYLENNQLRGPIPSLVGS---LEFFSAYEANISGTI 158
+EL D + G +PP L KL+ + + + NN L GPIP + S L + + SGTI
Sbjct: 336 LELNDNHLTGHIPPELGKLTDLFDLNVANNDLEGPIPDHLSSCTNLNSLNVHGNKFSGTI 395
Query: 159 PDFIGTDTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVS 218
P ++YL+L +NN++G IP ++S + L+ L L +NK+ GI P S
Sbjct: 396 PR--AFQKLESMTYLNLSSNNIKGPIP-------VELSRIGNLDTLDLSNNKINGIIPSS 446
Query: 219 -----------------------SFNNHPKLTTLNLTNNLLQGPTP------------RF 243
F N + ++L+NN + GP P R
Sbjct: 447 LGDLEHLLKMNLSRNHITGVVPGDFGNLRSIMEIDLSNNDISGPIPEELNQLQNIILLRL 506
Query: 244 NNSKLTVDMRTGSNCFCLDDPGLACDSRVNILLSIAESMGYPEVLAESRKGN-DPCPTYK 302
N+ LT ++ + +NC L + S N++ I ++ + +S GN C +
Sbjct: 507 ENNNLTGNVGSLANCLSLTVLNV---SHNNLVGDIPKNNNFSRFSPDSFIGNPGLCGS-- 561
Query: 303 YWKGISCDIGGNITENVVVITDGNPDVEKESNSPGSPPGSGSKIQILGITLGSVIGDFCG 362
W C +S + S S+ ILGI +G G
Sbjct: 562 -WLNSPC-----------------------HDSRRTVRVSISRAAILGIAIG-------G 590
Query: 363 LFVVGLGVFLYIRNKK------SSETVPIQVLRPRICGISVVHSVDFGDMAIPI-QVLRN 415
L ++ + + R S P+ P++ ++H +MA+ + + +
Sbjct: 591 LVILLMVLIAACRPHNPPPFLDGSLDKPVTYSTPKLV---ILHM----NMALHVYEDIMR 643
Query: 416 ATNNFSEENRLGRGGVGTVYKGELKDGTEVGVKRMELGSVTEQGIAQFESEITVLTK--- 472
T N SE+ +G G TVYK LK+ V +KR L S Q + QFE+E+ +L+
Sbjct: 644 MTENLSEKYIIGHGASSTVYKCVLKNCKPVAIKR--LYSHNPQSMKQFETELEMLSSIKH 701
Query: 473 -----------GTLGRHLF-NWEEEG-----------LEPLEWNTRLNIALDVARG---- 505
LG LF ++ E G + L+W+TRL IA A+G
Sbjct: 702 RNLVSLQAYSLSHLGSLLFYDYLENGSLWDLLHGPTKKKTLDWDTRLKIAYGAAQGLAYL 761
Query: 506 -----------------------DDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEY 542
+ R+ DFG+ + + + H+ T V GT GY+ PEY
Sbjct: 762 HHDCSPRIIHRDVKSSNILLDKDLEARLTDFGIAKSLCVSKSHTS-TYVMGTIGYIDPEY 820
Query: 543 IVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQKMHKNHDTFQMAI 602
T R+T K DVYS+G++L++L+T RK VD D + HL N++ +MA
Sbjct: 821 ARTSRLTEKSDVYSYGIVLLELLTRRKAVD----DESNLHHL---IMSKTGNNEVMEMA- 872
Query: 603 DKTIQLDEENLANVSTVAELGDHCCANEP 631
D I ++L V V +L C +P
Sbjct: 873 DPDITSTCKDLGVVKKVFQLALLCTKRQP 901
|
Receptor kinase that, together with ERL1 and ERL2, regulates aerial architecture, including inflorescence (e.g. shoot apical meristem-originating organ shape, elongation of the internode and pedicels, and adaxial-abaxial polarity), and stomatal patterning (e.g. density and clustering), probably by tuning cell division and expansion. Modulates plant transpiration efficiency by controlling stomatal density, leaf photosynthetic capacity, epidermal cell expansion, mesophyll cell proliferation and cell-cell contact. Probable major trait regulating canalization (maintenance of phenotype despite varying environment) in many aspect of the plant physiology (e.g. plant morphology, light-dependent leaves number, branch number, flowering time, phytate and mineral concentrations) by transducing microenvironmental variation into phenotypic differentiation (ecological amplifier). May maintain development integrity in heat stress conditions. Regulates cell wall composition and structure. Confers resistance to the pathogenic bacteria Ralstonia solanacearum and to the necrotrophic fungi Plectosphaerella cucumerina and Pythium irregulare, and required for callose deposition upon infection. Resistance to P.cucumerina seems cell wall-mediated. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|O04086|Y1105_ARATH Probable receptor-like protein kinase At1g11050 OS=Arabidopsis thaliana GN=At1g11050 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 131 bits (329), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 105/347 (30%), Positives = 154/347 (44%), Gaps = 74/347 (21%)
Query: 338 SPPGSGSKIQILGITLGSVIGDFCGLFVVGLGVFLYIRNKKSSETVPI----QVLRPRIC 393
SP S K + + LG F L + GL + LY R K+ + + Q RP+
Sbjct: 217 SPLNSKKKRHTVALALGITGAIFGALVIAGL-ICLYFRFGKAVKGGEVGWEDQGSRPK-- 273
Query: 394 GISVVHSVDFGDMAIPIQVLRNATNNFSEENRLGRGGVGTVYKGELKDGTEVGVKRMELG 453
+ G + I+ L ATNNFS++N +GRGG G VYKG L DG+ + VK++
Sbjct: 274 -----WRPNTGSIWFKIEELEKATNNFSQKNFIGRGGFGFVYKGVLPDGSVIAVKKVIES 328
Query: 454 SVTEQGIAQFESEITV--------------------------------LTKGTLGRHLFN 481
QG A+F +E+ + ++ G L HLF
Sbjct: 329 EF--QGDAEFRNEVEIISNLKHRNLVPLRGCSMVDDDSESQRYLVYDYMSNGNLDDHLFP 386
Query: 482 WEEEGLEPLEWNTRLNIALDVARG-------------------------DDMR--VADFG 514
E PL W R +I LDVA+G DMR VADFG
Sbjct: 387 RGETTKMPLSWPQRKSIILDVAKGLAYLHYGVKPAIYHRDIKGTNILLDVDMRARVADFG 446
Query: 515 LVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDAT 574
L + E H + T+VAGT GYLAPEY + G++T K DVYSFG+++++++ GRK +D +
Sbjct: 447 LAKQSREGESH-LTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCGRKALDLS 505
Query: 575 HSDPEYIIHLATWFQKMHKNHDTFQMAIDKTIQLDEENLANVSTVAE 621
S + W + K T + ++ + L+N + E
Sbjct: 506 TSGSPNTFLITDWAWSLVKAGKTEEALEQSLLREEGSGLSNPKGIME 552
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q9LK03|PERK2_ARATH Proline-rich receptor-like protein kinase PERK2 OS=Arabidopsis thaliana GN=PERK2 PE=2 SV=3 | Back alignment and function description |
|---|
Score = 130 bits (326), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 85/265 (32%), Positives = 135/265 (50%), Gaps = 62/265 (23%)
Query: 413 LRNATNNFSEENRLGRGGVGTVYKGELKDGTEVGVKRMELGSVTEQGIAQFESEITVLTK 472
L ATN FSE N LG+GG G V+KG L++G EV VK+++ GS QG +F++E+ ++++
Sbjct: 347 LSRATNGFSEANLLGQGGFGYVFKGMLRNGKEVAVKQLKEGS--SQGEREFQAEVGIISR 404
Query: 473 GTLGRHL--------------------------FNWEEEGLEPLEWNTRLNIALDVARG- 505
RHL F+ +G +EW++RL IA+ A+G
Sbjct: 405 -VHHRHLVALVGYCIADAQRLLVYEFVPNNTLEFHLHGKGRPTMEWSSRLKIAVGSAKGL 463
Query: 506 --------------------------DDMRVADFGLVRLVPENGKHSILTKVAGTFGYLA 539
+ +VADFGL ++ + H + T+V GTFGYLA
Sbjct: 464 SYLHENCNPKIIHRDIKASNILIDFKFEAKVADFGLAKIASDTNTH-VSTRVMGTFGYLA 522
Query: 540 PEYIVTGRITAKVDVYSFGMILMDLITGRKVVDA--THSDPEYIIHLATWFQKMHKNHDT 597
PEY +G++T K DV+SFG++L++LITGR+ +D H+D ++ A
Sbjct: 523 PEYASSGKLTEKSDVFSFGVVLLELITGRRPIDVNNVHAD-NSLVDWARPLLNQVSELGN 581
Query: 598 FQMAIDKTI--QLDEENLANVSTVA 620
F++ +DK + + D+E +A + A
Sbjct: 582 FEVVVDKKLNNEYDKEEMARMVACA 606
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q9LV48|PERK1_ARATH Proline-rich receptor-like protein kinase PERK1 OS=Arabidopsis thaliana GN=PERK1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 128 bits (322), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 80/224 (35%), Positives = 115/224 (51%), Gaps = 57/224 (25%)
Query: 403 FGDMAIPIQVLRNATNNFSEENRLGRGGVGTVYKGELKDGTEVGVKRMELGSVTEQGIAQ 462
F + L ATN FSE N LG+GG G V+KG L G EV VK+++ GS QG +
Sbjct: 263 FSKSTFTYEELSRATNGFSEANLLGQGGFGYVHKGILPSGKEVAVKQLKAGS--GQGERE 320
Query: 463 FESEITVLTKGTLGRHL--------------------------FNWEEEGLEPLEWNTRL 496
F++E+ ++++ RHL F+ +G +EW+TRL
Sbjct: 321 FQAEVEIISR-VHHRHLVSLIGYCMAGVQRLLVYEFVPNNNLEFHLHGKGRPTMEWSTRL 379
Query: 497 NIALDVARG---------------------------DDMRVADFGLVRLVPENGKHSILT 529
IAL A+G + +VADFGL ++ + H + T
Sbjct: 380 KIALGSAKGLSYLHEDCNPKIIHRDIKASNILIDFKFEAKVADFGLAKIASDTNTH-VST 438
Query: 530 KVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDA 573
+V GTFGYLAPEY +G++T K DV+SFG++L++LITGR+ VDA
Sbjct: 439 RVMGTFGYLAPEYAASGKLTEKSDVFSFGVVLLELITGRRPVDA 482
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q1PEM5|PERK3_ARATH Proline-rich receptor-like protein kinase PERK3 OS=Arabidopsis thaliana GN=PERK3 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 127 bits (320), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 95/296 (32%), Positives = 148/296 (50%), Gaps = 80/296 (27%)
Query: 338 SPPGSGSKIQ---ILGITLGSVIGDFCGLFVVGLGVFLYIRNKKSSETVPIQVLRPRICG 394
SPP S S++ ++GI++G G+FV+ L +F + K+ + + + G
Sbjct: 114 SPP-SPSRLSTGAVVGISIGG------GVFVLTL-IFFLCKKKRPRDDKALPAPIGLVLG 165
Query: 395 ISVVHSVDFGDMAIPIQVLRNATNNFSEENRLGRGGVGTVYKGELKDGTEVGVKRMELGS 454
I + +G++A ATN FSE N LG GG G VYKG L +G EV VK++++GS
Sbjct: 166 IHQ-STFTYGELA-------RATNKFSEANLLGEGGFGFVYKGILNNGNEVAVKQLKVGS 217
Query: 455 VTEQGIAQFESEITVLTK----------------------------GTLGRHLFNWEEEG 486
QG +F++E+ ++++ TL HL +G
Sbjct: 218 A--QGEKEFQAEVNIISQIHHRNLVSLVGYCIAGAQRLLVYEFVPNNTLEFHLHG---KG 272
Query: 487 LEPLEWNTRLNIALDVARG---------------------------DDMRVADFGLVRLV 519
+EW+ RL IA+ ++G + +VADFGL ++
Sbjct: 273 RPTMEWSLRLKIAVSSSKGLSYLHENCNPKIIHRDIKAANILIDFKFEAKVADFGLAKIA 332
Query: 520 PENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATH 575
+ H + T+V GTFGYLAPEY +G++T K DVYSFG++L++LITGR+ VDA +
Sbjct: 333 LDTNTH-VSTRVMGTFGYLAPEYAASGKLTEKSDVYSFGVVLLELITGRRPVDANN 387
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 631 | ||||||
| 449445063 | 953 | PREDICTED: probable receptor protein kin | 0.896 | 0.593 | 0.378 | 1e-131 | |
| 359476563 | 889 | PREDICTED: probable receptor protein kin | 0.884 | 0.627 | 0.395 | 1e-129 | |
| 224069210 | 945 | predicted protein [Populus trichocarpa] | 0.906 | 0.605 | 0.371 | 1e-117 | |
| 224077350 | 946 | predicted protein [Populus trichocarpa] | 0.906 | 0.604 | 0.371 | 1e-117 | |
| 255585572 | 951 | receptor protein kinase, putative [Ricin | 0.890 | 0.590 | 0.362 | 1e-113 | |
| 297838257 | 937 | hypothetical protein ARALYDRAFT_475717 [ | 0.920 | 0.620 | 0.356 | 1e-110 | |
| 356527863 | 897 | PREDICTED: probable receptor protein kin | 0.890 | 0.626 | 0.344 | 1e-104 | |
| 297817794 | 946 | hypothetical protein ARALYDRAFT_484098 [ | 0.900 | 0.600 | 0.333 | 6e-99 | |
| 1707642 | 962 | TMK [Oryza sativa Indica Group] | 0.873 | 0.572 | 0.339 | 2e-98 | |
| 356569387 | 949 | PREDICTED: probable receptor protein kin | 0.900 | 0.598 | 0.342 | 3e-98 |
| >gi|449445063|ref|XP_004140293.1| PREDICTED: probable receptor protein kinase TMK1-like [Cucumis sativus] gi|449479894|ref|XP_004155738.1| PREDICTED: probable receptor protein kinase TMK1-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 475 bits (1222), Expect = e-131, Method: Compositional matrix adjust.
Identities = 317/838 (37%), Positives = 402/838 (47%), Gaps = 272/838 (32%)
Query: 60 PDAAVMQDLKASFVIPKRLKWSDPDPCQWSHVICSDDGQVTNIELQDQNRKGTVPPILKK 119
PDA M LK S + L WSDP+PC+W+HV+CSDD +VT I++ QN +G +P L+
Sbjct: 32 PDAPAMTALKKSLNPTESLGWSDPNPCKWNHVLCSDDNRVTRIQIGRQNLQGMLPLNLQN 91
Query: 120 LSSMAVMYLENNQLRGPIPSLVG------------------------------------- 142
L+++ + L+ N++ GP+PSL G
Sbjct: 92 LTALERLELQWNKISGPLPSLSGLTSLQVLLLSGNQFTSIPSDFFAGMTSLQAVEIDENP 151
Query: 143 --------------SLEFFSAYEANISGTIPDFIGTDTFPQLSYLDLGNNNLQGTIPSSF 188
+L+ FSA AN++G IP+F+G + P L+ L L NNL+G +PSSF
Sbjct: 152 FSAWEIPASLRNASTLQNFSANSANVTGRIPEFLGGEDIPGLTNLHLAFNNLEGGLPSSF 211
Query: 189 GM------------------------------------------PFADISNLSTLEDLSL 206
P D S L L+ LSL
Sbjct: 212 SGSQLESLWVNGQNSADKLSGSIDVLQNMTSLIEVWLHSNSFSGPLPDFSRLKDLQALSL 271
Query: 207 GHNKLTGIFPVSSFNNHPKLTTLNLTNNLLQGPTPRFNNSKLTVDMRTGSNCFCLDDPGL 266
NK TG P SS N P L +NLTNNLLQGP P F + + VDM SN FCL DPG
Sbjct: 272 RDNKFTGPVP-SSLVNSPSLKVVNLTNNLLQGPIPLFK-TGVVVDMTNDSNSFCLQDPG- 328
Query: 267 ACDSRVNILLSIAESMGYPEVLAESRKGNDPC---------------------------- 298
CDSRVN LLSI + MGYP+ AE+ KGNDPC
Sbjct: 329 ECDSRVNTLLSIVKFMGYPQRFAENWKGNDPCAEWIGISCRNQSITIVNFQKMGLSGMIS 388
Query: 299 PTYKYWKGIS-------------------------CDIGGN--------ITENVVVITDG 325
P + KG+ D+ N NV++ G
Sbjct: 389 PEFASLKGLERLVLADNHLTGSIPEELTTLPFLTELDVSNNQLSGKIPKFRSNVMMTITG 448
Query: 326 NPDVEKE---SNSPGSPPGSGSK--------------------IQILGITLGSVIGDFCG 362
NPD+ KE S+S G+ P + S ++G+ + SV+G
Sbjct: 449 NPDIGKEKTDSSSNGASPSASSNDTKEAGSNGGGNSGDGEKKPSSMVGVIVLSVVGGVFV 508
Query: 363 LFVVGLGVFLYIRNKKSS----ETVPIQVLRPR------------ICGISV--------- 397
LF++GL V + K+ ++ V+ PR + G SV
Sbjct: 509 LFLIGLVVLCVYKMKQKRFSQVQSPNAMVIHPRHSGSDNESVKITVAGSSVRVGAISETQ 568
Query: 398 ---------VHSVDFGDMAIPIQVLRNATNNFSEENRLGRGGVGTVYKGELKDGTEVGVK 448
+ V+ G+M I IQVL+N TNNFSEEN LG+GG GTVYKGEL DGT++ VK
Sbjct: 569 NGASSETGDIQMVEAGNMVISIQVLKNVTNNFSEENILGQGGFGTVYKGELHDGTKIAVK 628
Query: 449 RMELGSVTEQGIAQFESEITVLTK----------------------------GTLGRHLF 480
RME G + +G+ +F+SEI VLTK GTL RHLF
Sbjct: 629 RMESGVIKGKGLTEFKSEIAVLTKVRHRHLVALLGYCLDGNEKLLVYEYMPQGTLSRHLF 688
Query: 481 NWEEEGLEPLEWNTRLNIALDVARG-------------------------DDMR--VADF 513
NW EEGL+PLEW RL IALDVARG DDMR VADF
Sbjct: 689 NWPEEGLKPLEWTKRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADF 748
Query: 514 GLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDA 573
GLVRL PE GK SI T++AGTFGYLAPEY VTGR+T KVDV+SFG+ILM+LITGRK +D
Sbjct: 749 GLVRLAPE-GKGSIETRIAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALD- 806
Query: 574 THSDPEYIIHLATWFQKMHKNHDTFQMAIDKTIQLDEENLANVSTVAELGDHCCANEP 631
S PE +HL TWF++M N D+F AID TI L EE A+++TVAEL HCCA EP
Sbjct: 807 -ESQPEESMHLVTWFRRMQINKDSFHKAIDPTIDLTEETFASINTVAELAGHCCAREP 863
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359476563|ref|XP_002265087.2| PREDICTED: probable receptor protein kinase TMK1-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 469 bits (1208), Expect = e-129, Method: Compositional matrix adjust.
Identities = 319/807 (39%), Positives = 391/807 (48%), Gaps = 249/807 (30%)
Query: 65 MQDLKASFVIPKRLKWSDPDPCQWSHVICSDDGQVTNIELQDQNRKGTVPPILKKLSSMA 124
M LK S + L WS PDPC+W HV+CS+D +VT I++ Q +GT+P L L+ +
Sbjct: 1 MLALKDSLSNSESLGWSGPDPCEWKHVVCSEDKRVTRIQVGRQGLQGTLPSSLGNLTELE 60
Query: 125 VMYLENNQLRGPIPSLVG------------------------------------------ 142
+ L+ N + GP+PSL G
Sbjct: 61 RLELQWNNISGPLPSLKGLSSLQVLMLSNNQFTYIPVDFFSGLSSLQSVEIDNNPFSAWE 120
Query: 143 ---------SLEFFSAYEANISGTIPDFIGTDTFPQLSYLDLGNNNLQGTIPSS------ 187
+L+ FSA ANI+G IPDF+G FP L L L N L G +PS+
Sbjct: 121 IPQSLKNASALQNFSANSANITGNIPDFLGPVAFPGLVNLHLAFNALVGGLPSALSGSLI 180
Query: 188 ------------------------------------FGMPFADISNLSTLEDLSLGHNKL 211
F P D S L L+ LSL N
Sbjct: 181 ESLWVNGQMSEEKLSGTIDVIQNMTSLKEVWLHSNAFSGPLPDFSGLKDLQSLSLRDNLF 240
Query: 212 TGIFPVSSFNNHPKLTTLNLTNNLLQGPTPRFNNSKLTVDMRTGSNCFCLDDPGLACDSR 271
TG+ PVS N L +NLTNN LQGP P F NS + VDM N FCL PG CD R
Sbjct: 241 TGVVPVS-LVNLGSLEAVNLTNNFLQGPVPEFKNS-VAVDMTPDGNSFCLPKPG-ECDPR 297
Query: 272 VNILLSIAESMGYPEVLAESRKGNDPCPTYKYWKGISCDIG-------------GNITEN 318
VNILLSI +S GYP A++ KGNDPC W GI+C+ G G I+ N
Sbjct: 298 VNILLSIVKSFGYPTKFAKNWKGNDPCTE---WFGITCNNGNITVVNFQKMGLTGTISSN 354
Query: 319 VVVITDGNPDVEKESNSPGSPPG------------------------------------- 341
+ V ++N GS P
Sbjct: 355 FSSLISLQKLVLADNNITGSIPKELTTLPALTQLDVSNNQLYGKIPSFKGNVLVNANGSQ 414
Query: 342 -SGSKI-------QILGITLGSVIGDFCGLFVVGLGVF-LYIRNKKSSETVP---IQVLR 389
SGS + ++GI + SVIG +F++GL VF LY R +K V V+
Sbjct: 415 DSGSSMNGGKKSSSLIGIIVFSVIGGVFVIFLIGLLVFCLYKRKQKRFTRVQSPNAMVIH 474
Query: 390 PRICG-------------------ISVVHS-----------VDFGDMAIPIQVLRNATNN 419
PR G IS H+ V+ G+M I IQVLRN TNN
Sbjct: 475 PRHSGSDNDSVKITVAGSSVSVGAISETHTHPSSEPNDIQMVEAGNMVISIQVLRNVTNN 534
Query: 420 FSEENRLGRGGVGTVYKGELKDGTEVGVKRMELGSVTEQGIAQFESEITVLTK------- 472
FSEEN LG+GG GTVY+GEL DGT++ VKRME G +T +G+A+F+SEI VLTK
Sbjct: 535 FSEENILGQGGFGTVYRGELHDGTKIAVKRMESGVITGKGLAEFKSEIAVLTKVRHRHLV 594
Query: 473 ---------------------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------ 505
GTL RHLF+W EEG++PLEW RL IALDVARG
Sbjct: 595 ALLGYCLDGNEKLLVYEYMPQGTLSRHLFSWPEEGIKPLEWTRRLAIALDVARGVEYLHG 654
Query: 506 -------------------DDMR--VADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIV 544
DDMR VADFGLVRL PE GK SI T++AGTFGYLAPEY V
Sbjct: 655 LAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPE-GKGSIETRIAGTFGYLAPEYAV 713
Query: 545 TGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQKMHKNHDTFQMAIDK 604
TGR+T KVDV+SFG+ILM+LITGRK +D S PE +HL TWF++MH N DTF+ AID
Sbjct: 714 TGRVTTKVDVFSFGVILMELITGRKALD--ESQPEESMHLVTWFKRMHINKDTFRKAIDP 771
Query: 605 TIQLDEENLANVSTVAELGDHCCANEP 631
TI +DEE LA++STVAEL HCCA EP
Sbjct: 772 TIDVDEETLASISTVAELAGHCCAREP 798
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224069210|ref|XP_002302927.1| predicted protein [Populus trichocarpa] gi|222844653|gb|EEE82200.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 429 bits (1103), Expect = e-117, Method: Compositional matrix adjust.
Identities = 311/837 (37%), Positives = 397/837 (47%), Gaps = 265/837 (31%)
Query: 54 SSNQSRPDAAVMQDLKASFVIPKRLKWSDPDPCQWSHVICSDDGQVTNIELQDQNRKGTV 113
+++Q+ PDA VM LK S +P L WSDPDPC W+HV+CSD+ +VT I++ QN +GT+
Sbjct: 26 ANSQTSPDAEVMFSLKKSLNVPDSLGWSDPDPCNWNHVVCSDEKRVTRIQIGRQNLQGTL 85
Query: 114 PPILKKLSSMAVMYLENNQLRGPIPSLVG------------------------------- 142
P L+ L+ + + L+ N + GP+PSL G
Sbjct: 86 PSNLRNLAQLERLELQYNNISGPLPSLNGLSSLQVILLSDNKFISVPSDFFTGLSSLQSV 145
Query: 143 --------------------SLEFFSAYEANISGTIPDFIGTDTFPQLSYLDLGNNNLQG 182
+L+ FSA ANISG+IP F G D+FP L+ L L N+L+G
Sbjct: 146 EIDNNPFSNWVIPESIKNASALQNFSANSANISGSIPGFFGPDSFPGLTILRLAFNDLEG 205
Query: 183 TIPSSFGM--------------------------------------PFADISNLSTLEDL 204
+P+SF P D S L LE L
Sbjct: 206 ELPASFSGSQVQSLWLNGQKLSGGIDVIQNMTLLREVWLHSNGFSGPLPDFSGLKDLESL 265
Query: 205 SLGHNKLTGIFPVSSFNNHPKLTTLNLTNNLLQGPTPRFNNSKLTVDMRTGSNCF----- 259
SL N TG+ P S N L +NL+NNLLQGP P F +S ++VDM SN F
Sbjct: 266 SLRDNSFTGLVP-ESLVNLESLKFVNLSNNLLQGPMPVFKSS-VSVDMVKDSNRFCLPTP 323
Query: 260 --------------------------------CLDDPGLACDSRVNILLSIAESMGY--- 284
C D G+ C++ NI + E MG
Sbjct: 324 DLCDSRVNTLLSIVKSMDYPQRLADSWKGNDPCADWIGITCNNG-NITVVNFEKMGLTGS 382
Query: 285 --PE----------VLAESR-KGNDP-----CPTYKYWKGISCDIGGNI---TENVVVIT 323
P+ VLA + G+ P P K + + G + T NV+V T
Sbjct: 383 ISPDFASVKSLERLVLANNNLTGSIPQEITTLPGLKVLDVSNNHLYGRVPAFTSNVIVNT 442
Query: 324 DGNPDVEKESN--------------------SPGSPPGSGSKIQILGITLGSVIGDFCGL 363
+GNP++ K+ N S ++ + + SVIG L
Sbjct: 443 NGNPNIGKDVNISTSSESPSASPSANTGSGSGGSSRKSGKKSSTLIVVIIFSVIGGVFLL 502
Query: 364 FVVGLGVF-LYIRNKKSSETVPI---QVLRPRICG-------------------ISVVHS 400
++GL VF LY + +K V V+ PR G IS H+
Sbjct: 503 SLIGLLVFCLYKKKQKRFSRVQSPNEMVIHPRHSGSDNESVKITVAGSSISVGAISETHT 562
Query: 401 -----------VDFGDMAIPIQVLRNATNNFSEENRLGRGGVGTVYKGELKDGTEVGVKR 449
V+ G+M I IQVLRN TNNFSEEN LG GG G VYKGEL DGT++ VKR
Sbjct: 563 IPASEQGDIQMVEAGNMVISIQVLRNVTNNFSEENILGWGGFGVVYKGELHDGTKIAVKR 622
Query: 450 MELGSVTEQGIAQFESEITVLTK----------------------------GTLGRHLFN 481
ME G ++ +G+ +F+SEI VLTK GTL RH+FN
Sbjct: 623 MESGVISGKGLTEFKSEIAVLTKVRHRHLVALLGYCLDGNEKLLVYEYMPQGTLSRHIFN 682
Query: 482 WEEEGLEPLEWNTRLNIALDVARG-------------------------DDMR--VADFG 514
W EEGL+PLEW RL IALDVARG DDMR VADFG
Sbjct: 683 WAEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFG 742
Query: 515 LVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDAT 574
LVRL PE GK SI T++AGTFGYLAPEY VTGR+T KVDV+SFG+ILM+LITGRK +D
Sbjct: 743 LVRLAPE-GKGSIETRIAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALD-- 799
Query: 575 HSDPEYIIHLATWFQKMHKNHDTFQMAIDKTIQLDEENLANVSTVAELGDHCCANEP 631
PE +HL TWF++MH N DTF+ AID TI L+EE LA++STVAEL HCCA EP
Sbjct: 800 ERQPEESLHLVTWFRRMHLNKDTFRKAIDPTIDLNEETLASISTVAELAGHCCAREP 856
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224077350|ref|XP_002305223.1| predicted protein [Populus trichocarpa] gi|222848187|gb|EEE85734.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 311/837 (37%), Positives = 400/837 (47%), Gaps = 265/837 (31%)
Query: 54 SSNQSRPDAAVMQDLKASFVIPKRLKWSDPDPCQWSHVICSDDGQVTNIELQDQNRKGTV 113
+S+Q+ PDA VM LK S +P L WSDPDPC+W+HV CSD+ +VT I++ QN +GT+
Sbjct: 26 ASSQASPDAEVMLSLKKSLNVPDSLGWSDPDPCKWNHVGCSDEKRVTRIQIGRQNLQGTL 85
Query: 114 PPILKKLSSMAVMYLENNQLRGPIPSLVG------------------------------- 142
P L+ L+ + + L+ N + G +PSL G
Sbjct: 86 PSNLQNLTQLERLELQYNNISGHLPSLNGLSSLQVILLSDNKFTSVPSDFFAGLSSLQSV 145
Query: 143 --------------------SLEFFSAYEANISGTIPDFIGTDTFPQLSYLDLGNNNLQG 182
L+ FSA ANISG+IP F G D FP L+ L L N+L+G
Sbjct: 146 EIDNNPFSNWVIPESIQNASGLQNFSANSANISGSIPSFFGPDAFPALTILRLAFNDLEG 205
Query: 183 TIPSSF-GM-------------------------------------PFADISNLSTLEDL 204
+P+SF G+ P D S L LE L
Sbjct: 206 ELPASFSGLQVQSLWLNGQKLSGSIYVIQNMTLLREVWLQSNGFSGPLPDFSGLKDLESL 265
Query: 205 SLGHNKLTGIFPVSSFNNHPKLTTLNLTNNLLQGPTPRFNNSKLTVDMRTGSNCFCL--- 261
+L N TG P S N L +NL+NNLLQGP P F +S ++VD+ SN FCL
Sbjct: 266 NLRDNSFTGPVP-ESLVNLESLKVVNLSNNLLQGPMPVFKSS-VSVDVVKDSNRFCLSTP 323
Query: 262 -----------------------------DDP-----GLACDSRVNILLSIAESMGY--- 284
+DP G+ C+ + NI + E MG
Sbjct: 324 GPCDSRVNTLLSIVKSMYYPHRLADGWKGNDPCADWFGITCN-KGNITVVNFEKMGLTGS 382
Query: 285 --PE----------VLAESR-KGNDPCPTYKYWKGISCDIGGN--------ITENVVVIT 323
P+ VLA + G P + + D+ N T NV+V T
Sbjct: 383 ISPDFASLKSLERLVLANNNLTGLIPQEITTLPRLKALDVSNNQIYGKVPAFTNNVIVNT 442
Query: 324 DGNPDVEKESNSPGSPPGSGSKI--------------------QILGITLGSVIGDFCGL 363
+GNP + K+ NS SP + +G+ + SV+G L
Sbjct: 443 NGNPRIGKDVNSSTSPGSPSASPSANTGSGSGGNSGKSGKKSSAFIGVIVFSVVGGVFLL 502
Query: 364 FVVGLGVF-LYIRNKKSSETVPI---QVLRPR-------------------ICGISVVHS 400
F++GL VF LY + +K V V+ PR + IS H+
Sbjct: 503 FLIGLVVFCLYKKKQKRFSRVQSPNEMVIHPRHSVSDNESVKITVAGSSVSVGAISETHT 562
Query: 401 V-----------DFGDMAIPIQVLRNATNNFSEENRLGRGGVGTVYKGELKDGTEVGVKR 449
+ + G+M I IQVLRN TNNFSEEN LG+GG G VYKGEL DGT++ VKR
Sbjct: 563 IPTSEQGDIQMGEAGNMVISIQVLRNVTNNFSEENILGQGGFGVVYKGELHDGTKIAVKR 622
Query: 450 MELGSVTEQGIAQFESEITVLTK----------------------------GTLGRHLFN 481
M G ++ +G+ +F+SEI VLTK GTL RHLFN
Sbjct: 623 MGSGVISSKGLNEFKSEIAVLTKVRHRHLVALLGYCLDGNEKLLVYEYMPQGTLSRHLFN 682
Query: 482 WEEEGLEPLEWNTRLNIALDVARG-------------------------DDMR--VADFG 514
W EEGL+P+EW RL IALDVARG DDMR V+DFG
Sbjct: 683 WAEEGLKPMEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVSDFG 742
Query: 515 LVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDAT 574
LVRL PE GK SI T++AGTFGYLAPEY VTGR+T KVDV+SFG+ILM+LITGRK +D
Sbjct: 743 LVRLAPE-GKGSIETRIAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALD-- 799
Query: 575 HSDPEYIIHLATWFQKMHKNHDTFQMAIDKTIQLDEENLANVSTVAELGDHCCANEP 631
S PE +HL TWF++MH N DTF+ AID TI L+EE LA++STVAEL HCCA EP
Sbjct: 800 DSQPEESMHLVTWFRRMHLNKDTFRKAIDPTIDLNEETLASISTVAELAGHCCAREP 856
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255585572|ref|XP_002533475.1| receptor protein kinase, putative [Ricinus communis] gi|223526668|gb|EEF28907.1| receptor protein kinase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 303/836 (36%), Positives = 391/836 (46%), Gaps = 274/836 (32%)
Query: 61 DAAVMQDLKASFVIPKRLKWSDPDPCQWSHVICSDDGQVTNIELQDQNRKGTVPPILKKL 120
DA VM L+ S +P L WSDPDPC W HV CSD+ +VT I++ QN +GT+P L+ L
Sbjct: 35 DAPVMFALRKSLNVPDSLGWSDPDPCNWKHVTCSDEKRVTRIQIGRQNLEGTLPSNLQNL 94
Query: 121 SSMAVMYLENNQLRGPIPSLVG-------------------------------------- 142
+ + + L+ N + GP+P+L G
Sbjct: 95 TQLERLELQWNSISGPLPTLKGLASLLVVMLSGNQFTSIPSDFFTGLSSLQSVEIDDNPF 154
Query: 143 -------------SLEFFSAYEANISGTIPDFIGTDTFPQLSYLDLGNNNLQGTIPSSFG 189
+L+ FSA AN+SG+IPDF G D+FP L+ L L N LQG +P +F
Sbjct: 155 STWVIPESIKDASALQNFSANSANLSGSIPDFFGPDSFPGLTILHLALNELQGGLPGTFS 214
Query: 190 M------------------------------------------PFADISNLSTLEDLSLG 207
P D S L LE LS+
Sbjct: 215 GSQIQSLWLNGQTSKGKLTGGIDVIKNMTLLKDVWLHSNGFSGPLPDFSGLKDLEVLSIR 274
Query: 208 HNKLTGIFPVSSFNNHPKLTTLNLTNNLLQGPTPRFNNSKLTVDMRTGSNCFCL------ 261
N TG P+S L +NL+NNL QGP P F ++VD+ SN FCL
Sbjct: 275 DNSFTGPIPLS-LTALASLKAVNLSNNLFQGPMPVFKR-LVSVDLTADSNSFCLPSPGDC 332
Query: 262 --------------------------DDP-----GLACDSRVNILLSIAESMG------- 283
+DP G+ C NI + + MG
Sbjct: 333 DSRVKTLLLIAKSVGYPQRFAESWKGNDPCADWVGITCTGG-NITVVNFQKMGLTGTVAP 391
Query: 284 -YPEVLAESR--------KGNDP-----CPTYKYWKGISCDIGGNI---TENVVVITDGN 326
+ +L+ R G+ P P K + I G I NV+V T+GN
Sbjct: 392 EFAMLLSLQRLVLDNNNLTGSIPQELTTLPALKQLDVSNNQISGKIPTFKSNVMVNTNGN 451
Query: 327 PDVEKESNS---PGSPPGS----------------GSKIQILGITLGSVIGDFCGLFVVG 367
PD+ K+ N+ PGSP G+ +G+ L SVIG G+FV+
Sbjct: 452 PDIGKDVNTSTTPGSPSGATMAGTGSGSGNSGNGGKKSSSNIGVILFSVIG---GVFVIS 508
Query: 368 L-GVFLY-IRNKKSSETVPIQ-----VLRPRICG-------------------ISVVHS- 400
L G+ ++ I KK +Q V+ PR G IS H+
Sbjct: 509 LIGLLIFCIYKKKQKRFSKVQSPNAMVIHPRHSGSDNESVKITVAGSSVSVGAISETHTF 568
Query: 401 ----------VDFGDMAIPIQVLRNATNNFSEENRLGRGGVGTVYKGELKDGTEVGVKRM 450
V+ G+M I IQVLRN TNNFSE+N LG+GG G VYKGEL DGT++ VKRM
Sbjct: 569 PASEQGDIQMVESGNMVISIQVLRNVTNNFSEDNLLGQGGFGKVYKGELHDGTKIAVKRM 628
Query: 451 ELGSVTEQGIAQFESEITVLTK----------------------------GTLGRHLFNW 482
E G ++ +G+A+F+SEI VL K G L RHLF+W
Sbjct: 629 ESGVISGKGLAEFKSEIAVLNKVRHRHLVALLGYCLDGNEKLLVYEFMPQGALSRHLFHW 688
Query: 483 EEEGLEPLEWNTRLNIALDVARG-------------------------DDMR--VADFGL 515
++GL+PLEW RL IALDVARG DDMR VADFGL
Sbjct: 689 ADDGLKPLEWTRRLIIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGL 748
Query: 516 VRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATH 575
VRL P+ GK SI T++AGTFGYLAPEY VTGR+T KVDV+SFG+ILM+LITGRK +D
Sbjct: 749 VRLAPD-GKGSIETRIAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALD--D 805
Query: 576 SDPEYIIHLATWFQKMHKNHDTFQMAIDKTIQLDEENLANVSTVAELGDHCCANEP 631
S PE +HL TWF+++H N D+F+ AID I +DEE LA+VSTVAEL HCCA EP
Sbjct: 806 SQPEESMHLVTWFRRVHINKDSFRKAIDPAIDVDEETLASVSTVAELAGHCCAREP 861
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297838257|ref|XP_002887010.1| hypothetical protein ARALYDRAFT_475717 [Arabidopsis lyrata subsp. lyrata] gi|297332851|gb|EFH63269.1| hypothetical protein ARALYDRAFT_475717 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 304/852 (35%), Positives = 386/852 (45%), Gaps = 271/852 (31%)
Query: 45 KKRRKIPSAS-----SNQSRPDAAVMQDLKASFVIPKRLKWSDPDPCQWSHVICSDDGQV 99
KKRR + S + S D + M LK S P WSDPDPC+W+H++C+ +V
Sbjct: 2 KKRRTFLTFSFTFLLKSDSDGDLSAMISLKKSLNPPSSFGWSDPDPCKWTHIVCTGTKRV 61
Query: 100 TNIELQDQNRKGTVPPILKKLSSMAVMYLENNQLRGPIPSLVG----------------- 142
T I++ +GT+ P L+ LS + + L+ N + GP+PSL G
Sbjct: 62 TRIQIGHSGLQGTLSPDLRNLSELERLELQWNNISGPVPSLSGLASLQVLMLSNNNFDSI 121
Query: 143 ----------------------------------SLEFFSAYEANISGTIPDFIGTDTFP 168
+L+ FSA AN+SG +P F G D FP
Sbjct: 122 PSDVFEGLTSLQSVEIDNNPFKAWEIPESLRNASALQNFSANSANVSGKLPGFFGPDEFP 181
Query: 169 QLSYLDLGNNNLQGTIPSS--------------------------------------FGM 190
LS L L N+L G +P S F
Sbjct: 182 GLSILHLAFNSLGGELPLSLAGSQVQSLWLNGQKLTGEINVLQNMTGLKEVWLHSNVFSG 241
Query: 191 PFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNNLLQGPTPRFNNSKLTV 250
P D S L LE LSL N TG P S + L LNLTNN LQGP P F +S ++V
Sbjct: 242 PLPDFSGLKELESLSLRDNAFTGPVPTSLLSLE-SLKVLNLTNNHLQGPVPVFKSS-VSV 299
Query: 251 DMRTGSNCFCL--------------------------------DDP-----GLACDSRVN 273
D+ SN FCL +DP G+AC S N
Sbjct: 300 DLDKDSNSFCLPSPDECDSRVKSLLLIASSFDYPQRLAESWKGNDPCTNWIGIAC-SNGN 358
Query: 274 ILLSIAESMGYPEVLA----------------ESRKGNDP-----CPTYKYWKGISCDIG 312
I + E MG ++ + G P P K S +
Sbjct: 359 ITVINLEKMGLTGTISPEFGSIKSLQRIILGINNLTGTIPQELTTLPNLKTLDVSSNKLF 418
Query: 313 GNI---TENVVVITDGNPDVEKESNSP-----------------GSPPGSGSKIQ-ILGI 351
G + NVVV T+GNPD+ K+ +S G G K +GI
Sbjct: 419 GKVPGFRSNVVVSTNGNPDIGKDKSSLPSPGSSSPSGGSGSGINGDKDRRGMKSSTFIGI 478
Query: 352 TLGSVIGDFCGLFVVGLGVFLYIRNKKS----SETVPIQVLRPR------------ICGI 395
+GSV+G +F++GL VF + + ++ E+ V+ PR + G
Sbjct: 479 VVGSVLGGLLSIFMIGLLVFCWYKKRQKCNTRGESSNAVVVHPRHSGSDNESVKITVAGS 538
Query: 396 SV--------------------VHSVDFGDMAIPIQVLRNATNNFSEENRLGRGGVGTVY 435
SV + V+ G+M I IQVLR+ TNNFS +N LG GG G VY
Sbjct: 539 SVSVGGISDTYTLPGTSEVGDNIQMVEAGNMLISIQVLRSVTNNFSADNILGSGGFGVVY 598
Query: 436 KGELKDGTEVGVKRMELGSVTEQGIAQFESEITVLTK----------------------- 472
KGEL DGT++ VKRME G + +G A+F+SEI VLTK
Sbjct: 599 KGELHDGTKIAVKRMENGVIVGKGFAEFKSEIAVLTKVRHRHLVTLLGYCLDGNEKLLVY 658
Query: 473 -----GTLGRHLFNWEEEGLEPLEWNTRLNIALDVAR----------------------- 504
GTL RHLF W EEGL+PL W RL +ALDVAR
Sbjct: 659 EYMPQGTLSRHLFEWSEEGLKPLLWKQRLTLALDVARGVEYLHGLAHQSFIHRDLKPSNI 718
Query: 505 --GDDMR--VADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMI 560
GDDMR VADFGLVRL PE GK SI T++AGTFGYLAPEY VTGR+T KVDVYSFG+I
Sbjct: 719 LLGDDMRAKVADFGLVRLAPE-GKGSIETRIAGTFGYLAPEYAVTGRVTTKVDVYSFGVI 777
Query: 561 LMDLITGRKVVDATHSDPEYIIHLATWFQKMHKNHD-TFQMAIDKTIQLDEENLANVSTV 619
LM+LITGRK +D S PE IHL +WF++M+ N + +F+ AID TI LDEE LA+V TV
Sbjct: 778 LMELITGRKSLD--ESQPEESIHLVSWFKRMYINKESSFKKAIDPTIDLDEETLASVHTV 835
Query: 620 AELGDHCCANEP 631
AEL HCCA EP
Sbjct: 836 AELAGHCCAREP 847
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356527863|ref|XP_003532526.1| PREDICTED: probable receptor protein kinase TMK1-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 275/799 (34%), Positives = 370/799 (46%), Gaps = 237/799 (29%)
Query: 61 DAAVMQDLKASFVIPKRLKWSDPDPCQWSHVICSDDGQVTNIELQDQNRKGTVPPILKKL 120
DA VM LK P +W++PD C+W HV C +VT I++ QN +G++P L KL
Sbjct: 32 DAEVMGILKIMINAPISFQWTNPDVCKWRHVTCDSSKRVTAIQIGSQNLQGSLPKELVKL 91
Query: 121 SSMAVMYLENNQLRGPIPSLVGSLE----------------------------------- 145
+S+ + N L GP P L SL+
Sbjct: 92 TSLERFECQFNSLTGPFPYLSKSLQKLVIHDNKFSFIPNDFFKGMSHLQEVRIDDNPFSQ 151
Query: 146 --------------FFSAYEANISGTIPDFIGTD-TFPQLSYLDLGNNNLQGTIPSS--- 187
FSA + GTIP+F G D FP L L L +N L+G +P+S
Sbjct: 152 WHIHDTLRDCVALHTFSAQSVGLVGTIPNFFGKDGPFPGLVLLALSDNFLEGALPTSLSD 211
Query: 188 ---------------------------------------FGMPFADISNLSTLEDLSLGH 208
F P D+S+ L D++L
Sbjct: 212 SSIENLLVNGQNSLSKLNGTLVVLQNMKSLRQIWANGNSFTGPIPDLSHHDQLSDVNLRD 271
Query: 209 NKLTGIFPVSSFNNHPKLTTLNLTNNLLQGPTPRFNNSKLTVD--MRTGSNCFCLDDPGL 266
N+LTG+ P S + P L +NLTNN LQG +P F + VD M G N +C D PG
Sbjct: 272 NQLTGVVP-PSLISLPSLKFVNLTNNFLQGSSPIFKYG-VGVDNSMDKGKNQYCTDVPGQ 329
Query: 267 ACDSRVNILLSIAESMGYPEVLAESRKGNDP----------------------------- 297
C VN LLSI E MGYP A++ +G+DP
Sbjct: 330 PCSPLVNSLLSIVEPMGYPLKFAQNWQGDDPCANKWTGIICSGGNISVINFQNMGLSGTI 389
Query: 298 CPTYKYWKGIS-------------------------CDIGGN--------ITENVVVITD 324
CP + + ++ D+ N ++VV+
Sbjct: 390 CPCFAKFTSVTKLLLANNGFIGTIPNELTSLPLLQELDVSNNHLYGKVPLFRKDVVLKLA 449
Query: 325 GNPDVEKESNSPGSPPGSGSKIQILGITLGSVIGDFCGLFVVGLGVFLYIRNKKS----- 379
GNPD+ K+ + S +GS T + + ++ GV + ++ K+
Sbjct: 450 GNPDIGKDKPTSSSFIDNGSNHN----TAIIIGIVVVAVIILISGVLILVKFKRKWEHER 505
Query: 380 -SETVPIQVLRPRICG----------ISVVHSVDFGDMAIPIQVLRNATNNFSEENRLGR 428
++ P+ ++ R G + V+ V+ +M I +QVLRN TNNFSE+N LG+
Sbjct: 506 KTQNPPVIMVPSRRYGDGTTSALLSPMGSVYQVEDHNMLISVQVLRNVTNNFSEKNILGK 565
Query: 429 GGVGTVYKGELKDGTEVGVKRME-LGSVTEQGIAQFESEITVLTK--------------- 472
GG GTVYKGEL DGT++ VKRM+ G V E+G+++F +EI VLTK
Sbjct: 566 GGFGTVYKGELHDGTKIAVKRMQSAGLVDEKGLSEFTAEIAVLTKVRHINLVSLLGFCLD 625
Query: 473 -------------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG-------------- 505
G L +HL NW+ EGL+PLEW TRL IALDVARG
Sbjct: 626 GSERLLVYEHMPQGALSKHLINWKSEGLKPLEWKTRLGIALDVARGVEYLHGLAQQIFIH 685
Query: 506 -----------DDMR--VADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKV 552
DDMR V+DFGLVRL PE GK S TK+AGTFGY+APEY TGR+T KV
Sbjct: 686 RDLKPSNILLGDDMRAKVSDFGLVRLAPE-GKTSFQTKLAGTFGYMAPEYAATGRLTTKV 744
Query: 553 DVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQKMHKNHDTFQMAIDKTIQLDEEN 612
DVYSFG+ILM++ITGRK +D + PE +HL TWF+KM N ++FQ ID TI++D E
Sbjct: 745 DVYSFGVILMEMITGRKALD--DNQPEENVHLVTWFRKMLLNKNSFQTTIDPTIEVDAET 802
Query: 613 LANVSTVAELGDHCCANEP 631
L N++ VAEL HCCA EP
Sbjct: 803 LVNINIVAELAGHCCAREP 821
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297817794|ref|XP_002876780.1| hypothetical protein ARALYDRAFT_484098 [Arabidopsis lyrata subsp. lyrata] gi|297322618|gb|EFH53039.1| hypothetical protein ARALYDRAFT_484098 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 368 bits (944), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 281/842 (33%), Positives = 382/842 (45%), Gaps = 274/842 (32%)
Query: 54 SSNQSRPDAAVMQDLKASFVIPKRLKWSDPDPCQWSHVICSDDGQVTNIELQDQNRKGTV 113
S +Q+ D + M+ LK+S + + WS+P+PC+W V C +VT I+L+ + +GT+
Sbjct: 22 SVSQNGVDDSTMEALKSSLNLTSDVDWSNPNPCKWESVECDGSNRVTKIQLKQKGIRGTL 81
Query: 114 PPILKKLSSMAVMYLENNQLRGPIPSLVG------------------------------- 142
P L+KLS + V+ L N++ GPIP L G
Sbjct: 82 PTDLQKLSELVVLELFLNRISGPIPDLSGLSRLQTLNLHDNLFDSVPNNLFSGMSSLQEV 141
Query: 143 --------------------SLEFFSAYEANISGTIPDFIGTDTFPQLSYLDLGNNNLQG 182
SL+ + +I G IPDF G+ + P L+ L L N LQG
Sbjct: 142 YLENNPFNPWQIPDSIKEATSLQNLTLSNCSIFGKIPDFFGSQSLPSLTNLKLSQNRLQG 201
Query: 183 TIPSSFGM-----------------------------------------PFADISNLSTL 201
+P SF P D+S L +L
Sbjct: 202 ELPVSFAGTSLQSLFLNGQVGEQLNGSISILRNMTSLVEVSLQGNKFSGPIPDLSGLLSL 261
Query: 202 EDLSLGHNKLTGIFPVS--SFNNHPKLTTLNLTNNLLQGPTPRFNNSKLTVDMRTGSNCF 259
++ N+LTG+ P S S N+ LTT+NLTNNLLQGPTP F S + VD+ +N F
Sbjct: 262 RVFNVRENQLTGVVPQSLISLNS---LTTVNLTNNLLQGPTPLFGKS-VGVDIFNNTNSF 317
Query: 260 --------------------------------------CLDDPGLAC------------- 268
C++ G+ C
Sbjct: 318 CTSIAGEACDPRVDTLVSVAESFGYPVKLASSWKGNNPCVNWVGITCSGGNITVVNLRKQ 377
Query: 269 DSRVNILLSIAESMGYPEVLAESRKGNDPCPT--YKYWKGISCDIGGNITENVV------ 320
D I S+A + + + P PT K + D+ N VV
Sbjct: 378 DLSGTISASLANLTSLETINLSDNELSGPIPTELTTLSKLRTLDVSNNDLYGVVPKFPNT 437
Query: 321 --VITDGNPDVEKESN-SPGSPPGS------------------GSKIQILGITLGSVIGD 359
++T+GN ++ K SP PG+ S ++I+ +G V+G
Sbjct: 438 VHLVTEGNVNIGKTGPISPSGSPGASPGSKPSGGSGGSETSKKSSNVKIIVPVVGGVVGA 497
Query: 360 FCGLFVVGLGVFLYIRNKKSSETVPI----QVLRPRICG--------------------- 394
C +VGLGV LY + +K V V+ P G
Sbjct: 498 LC---LVGLGVCLYAKKRKRPARVQSPSSNMVIHPHHSGDNDDIKLTVAASSLNSGGGSE 554
Query: 395 --------ISVVHSVDFGDMAIPIQVLRNATNNFSEENRLGRGGVGTVYKGELKDGTEVG 446
S +H V+ G++ I IQVLRN TNNFSEEN LGRGG GTVYKGEL DGT++
Sbjct: 555 SYSHSGSAASDIHVVEAGNLVISIQVLRNVTNNFSEENILGRGGFGTVYKGELHDGTKIA 614
Query: 447 VKRMELGSVTEQGIAQFESEITVLTK----------------------------GTLGRH 478
VKRME V+++G+ +F+SEITVLTK GTL +H
Sbjct: 615 VKRMESSVVSDKGLTEFKSEITVLTKMRHRHLVALLGYCLDGNERLLVYEYMPQGTLSQH 674
Query: 479 LFNWEEEGLEPLEWNTRLNIALDVARG-------------------------DDMR--VA 511
LF+W+EEG +PL+W RL IALDVARG DDMR V+
Sbjct: 675 LFHWKEEGRKPLDWTRRLAIALDVARGVEYLHTLAHQSFIHRDLKPSNILLGDDMRAKVS 734
Query: 512 DFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVV 571
DFGLVRL P+ GK+SI T+VAGTFGYLAPEY VTGR+T KVD++S G+ILM+LITGRK +
Sbjct: 735 DFGLVRLAPD-GKYSIETRVAGTFGYLAPEYAVTGRVTTKVDIFSLGVILMELITGRKAL 793
Query: 572 DATHSDPEYIIHLATWFQKM--HKNHDTFQMAIDKTIQLDEENLANVSTVAELGDHCCAN 629
D T PE +HL TWF+++ K+ + F+ AID I LD++ LA++ V EL HCCA
Sbjct: 794 DETQ--PEDSVHLVTWFRRIAASKDENAFKNAIDPNISLDDDTLASIEKVWELAGHCCAR 851
Query: 630 EP 631
EP
Sbjct: 852 EP 853
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|1707642|emb|CAA69028.1| TMK [Oryza sativa Indica Group] | Back alignment and taxonomy information |
|---|
Score = 366 bits (940), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 279/823 (33%), Positives = 370/823 (44%), Gaps = 272/823 (33%)
Query: 76 KRLKWSDPDPCQ----WSHVICSDDGQVTNIELQDQNRKGTVPPILKKLSSMAVMYLENN 131
K L WS DPC W+ V C G+VT +++ +++ G + P ++ L+++A + L +N
Sbjct: 55 KALGWSTGDPCSSPRAWAGVTCDSAGRVTAVQVGNRSLTGRLAPEVRNLTALARLELFDN 114
Query: 132 QLRGPIPSLVG------------------------------------------------- 142
+ G +PSL G
Sbjct: 115 SISGELPSLAGLSSLQYLLVHNNGFTRIPPDFFKGLTALAAVSLDNNPFDPWPLPADLAD 174
Query: 143 --SLEFFSAYEANISGTIPDFIGTDTFPQLSYLDLGNNNLQGTIPSS------------- 187
SL FSA AN++G +PDF GT P L L L N + G +P+S
Sbjct: 175 CTSLTNFSANTANVTGALPDFFGT-ALPSLQRLSLAFNKMSGPVPASLATAPLQALWLNN 233
Query: 188 -----------------------------FGMPFADISNLSTLEDLSLGHNKLTGIFPVS 218
F P D S L++L DL L N+LTG P
Sbjct: 234 QIGENQFNGSISFISNMTSLQELWLHSNDFTGPLPDFSGLASLSDLELRDNQLTGPVP-D 292
Query: 219 SFNNHPKLTTLNLTNNLLQGPTPRFNNSKLTVDMRTGSNCFCL----------------- 261
S LT + LTNNLLQGPTP+F + K+ D+ + FCL
Sbjct: 293 SLLKLGSLTKVTLTNNLLQGPTPKFAD-KVKADVVPTTERFCLSTPGQPCDPRVSLLLEV 351
Query: 262 ----------------DDP-----GLACDS---------RVNILLSIAESMG-----YPE 286
+DP G+ CD+ R+ SI+ ++G
Sbjct: 352 AAGFQYPAKLADNWKGNDPCDGYIGVGCDAGNITVLNFARMGFSGSISPAIGKITTLQKL 411
Query: 287 VLAESR-KGNDPCPTYKYWKGISCDIGGN---------ITENVVVITDGNPDVEKESNSP 336
+LA++ G P D+ N +NV+V +GNP++ K++ +P
Sbjct: 412 ILADNNITGTVPKEVAALPALTEVDLSNNNLYGKLPTFAAKNVLVKANGNPNIGKDAPAP 471
Query: 337 ---------GSPPGSGSKIQIL--------GITLGSVIGDFCGL-FVVGLGVFLYIRNKK 378
+P G GI GSV+G G+ + LG + Y R +K
Sbjct: 472 SGSGGSGGSNAPDGGNGGDGSNGSPSPSSAGIIAGSVVGAIAGVGLLAALGFYCYKRKQK 531
Query: 379 ---SSETVPIQVLRPRICG-------ISV------------------------VHSVDFG 404
++ V+ PR G I+V +H V+ G
Sbjct: 532 PFGRVQSPHAMVVHPRHSGSDPDMVKITVAGGNVNGGAAASETYSQASSGPRDIHVVETG 591
Query: 405 DMAIPIQVLRNATNNFSEENRLGRGGVGTVYKGELKDGTEVGVKRMELGSVTEQGIAQFE 464
+M I IQVLRN TNNFS+EN LGRGG GTVYKGEL DGT++ VKRME G + +G+ +F+
Sbjct: 592 NMVISIQVLRNVTNNFSDENVLGRGGFGTVYKGELHDGTKIAVKRMEAGVMGNKGLNEFK 651
Query: 465 SEITVLTK----------------------------GTLGRHLFNWEEEGLEPLEWNTRL 496
SEI VLTK GTL +HLF W+E L PLEW RL
Sbjct: 652 SEIAVLTKVRHRNLVSLLGYCLDGNERILVYEYMPQGTLSQHLFEWKEHNLRPLEWKKRL 711
Query: 497 NIALDVARG-------------------------DDMR--VADFGLVRLVPENGKH-SIL 528
+IALDVARG DDM+ VADFGLVRL P +GK S+
Sbjct: 712 SIALDVARGVEYLHSLAQQTFIHRDLKPSNILLGDDMKAKVADFGLVRLAPADGKCVSVE 771
Query: 529 TKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWF 588
T++AGTFGYLAPEY VTGR+T K DV+SFG+ILM+LITGRK +D T PE +HL TWF
Sbjct: 772 TRLAGTFGYLAPEYAVTGRVTTKADVFSFGVILMELITGRKALDETQ--PEDSMHLVTWF 829
Query: 589 QKMHKNHDTFQMAIDKTIQLDEENLANVSTVAELGDHCCANEP 631
++M + DTFQ AID TI L EE LA+VSTVAEL HCCA EP
Sbjct: 830 RRMQLSKDTFQKAIDPTIDLTEETLASVSTVAELAGHCCAREP 872
|
Source: Oryza sativa Indica Group Species: Oryza sativa Genus: Oryza Family: Poaceae Order: Poales Class: Liliopsida Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356569387|ref|XP_003552883.1| PREDICTED: probable receptor protein kinase TMK1-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 365 bits (938), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 289/843 (34%), Positives = 383/843 (45%), Gaps = 275/843 (32%)
Query: 57 QSRPDAAVMQDLKASFVIPKRLKWSDPDPCQWSHVICSDD-GQVTNIELQDQNRKGTVP- 114
S+ DA+ M L+ S P+ L WSDPDPC+W HV CS++ ++ I++ +GT+P
Sbjct: 23 HSQDDASAMLSLRDSLNPPESLGWSDPDPCKWKHVACSEEVKRIIRIQIGHLGLQGTLPN 82
Query: 115 -PILKKLSSMAVMYLENNQLRGPIPSLVG------------------------------- 142
+++ L+ + + L+ N + GP+PSL G
Sbjct: 83 ATVIQTLTQLERLELQFNNISGPLPSLNGLGSLQVLILSNNQFSSIPDDFFAGMSELQSV 142
Query: 143 --------------------SLEFFSAYEANISGTIPDFIGTDTFPQLSYLDLGNNNLQG 182
SL+ FSA ANI GT+PDF + P L++L L NNLQG
Sbjct: 143 EIDDNPFKPWKIPDSIVNCSSLQNFSANSANIVGTLPDFF--SSLPTLTHLHLAFNNLQG 200
Query: 183 TIPSSFGM--------------------------------------------PFADISNL 198
+P SF P D S L
Sbjct: 201 ALPLSFSGSQIETLWLNGQKGVESNNLGGNVDVLQNMTSLTQVWLHSNAFTGPLPDFSGL 260
Query: 199 STLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNNLLQGPTPRFNNSKLTVDMRTG--S 256
+L+DL+L N TG P S L +NLTNNL QG P F S + VD+ G S
Sbjct: 261 VSLQDLNLRDNAFTGPVP-GSLVELKSLKAVNLTNNLFQGAVPEFG-SGVEVDLDLGDDS 318
Query: 257 NCF-------------------------------------CLDDPGLACDSRVNILLSIA 279
N F C D G+ C +I +
Sbjct: 319 NSFCLSRGGKCDPRVEILLSVVRVLGYPRRFAENWKGNSPCADWIGVTCSGGGDITVVNF 378
Query: 280 ESMGY-----PE----------VLAESR-KGNDPCPTYKYWKGISCDIGGN--------I 315
+ MG PE VLA++ G+ P + ++ N
Sbjct: 379 KKMGLEGTIAPEFGLLKSLQRLVLADNNLTGSIPEELASLPGLVELNVANNRLYGKIPSF 438
Query: 316 TENVVVITDGNPDVEKESNSPG---SPPG-------------SGSKIQILGITLGSVIGD 359
NVV+ T+GN D+ K+ +PG SP G G + +G+ + +VIG
Sbjct: 439 KSNVVLTTNGNKDIGKDKPNPGPRSSPLGPLNSRAPNRSEENGGKRSSHVGVIVLAVIGG 498
Query: 360 ----------FCGLFVVGL----------GVFLYIRNKKS-SETVPIQVLRP--RIC--- 393
C LF + + ++ R+ S +E V I V +C
Sbjct: 499 VVLVLVISFLVCCLFRMKQKRLSKVQSPNALVIHPRHSGSDNENVKITVAGSSLSVCDVS 558
Query: 394 --GISVVHSVDFGD--------MAIPIQVLRNATNNFSEENRLGRGGVGTVYKGELKDGT 443
G+ + + GD M I IQVLRN T+NFSE+N LG+GG GTVYKGEL DGT
Sbjct: 559 GIGMQTMAGSEAGDIQMGEAGNMVISIQVLRNVTDNFSEKNILGQGGFGTVYKGELHDGT 618
Query: 444 EVGVKRMELGSVTEQGIAQFESEITVLTK----------------------------GTL 475
++ VKRME G+++ +G +F+SEI VLTK GTL
Sbjct: 619 KIAVKRMESGAISGKGATEFKSEIAVLTKVRHRHLVSLLGYCLDGNEKLLVYEYMPQGTL 678
Query: 476 GRHLFNWEEEGLEPLEWNTRLNIALDVAR-------------------------GDDMR- 509
+HLFNW EEGL+PLEWN RL IALDVAR GDDMR
Sbjct: 679 SKHLFNWMEEGLKPLEWNRRLTIALDVARAVEYLHSLAHQSFIHRDLKPSNILLGDDMRA 738
Query: 510 -VADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGR 568
V+DFGLVRL PE GK S+ T++AGTFGYLAPEY VTGR+T KVDV+SFG+ILM+LITGR
Sbjct: 739 KVSDFGLVRLAPE-GKASVETRIAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGR 797
Query: 569 KVVDATHSDPEYIIHLATWFQKMHKNHDTFQMAIDKTIQLDEENLANVSTVAELGDHCCA 628
+ +D T PE +HL TWF++M+ N D+FQ AID TI L+EE L + TVAEL HCCA
Sbjct: 798 RALDDTQ--PEDSMHLVTWFRRMYVNKDSFQKAIDHTIDLNEETLPRIHTVAELAGHCCA 855
Query: 629 NEP 631
EP
Sbjct: 856 REP 858
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 631 | ||||||
| TAIR|locus:2059703 | 943 | AT2G01820 [Arabidopsis thalian | 0.202 | 0.135 | 0.570 | 7.7e-90 | |
| TAIR|locus:2013825 | 942 | TMK1 "transmembrane kinase 1" | 0.202 | 0.135 | 0.664 | 9.5e-89 | |
| TAIR|locus:2024016 | 886 | AT1G24650 [Arabidopsis thalian | 0.202 | 0.144 | 0.578 | 5.4e-75 | |
| TAIR|locus:2095188 | 928 | AT3G23750 [Arabidopsis thalian | 0.202 | 0.137 | 0.518 | 2.4e-68 | |
| TAIR|locus:2036636 | 632 | NIK3 "NSP-interacting kinase 3 | 0.228 | 0.227 | 0.337 | 2.5e-39 | |
| TAIR|locus:2156992 | 946 | AT5G49770 [Arabidopsis thalian | 0.234 | 0.156 | 0.341 | 1.3e-38 | |
| TAIR|locus:2026097 | 628 | SERK2 "somatic embryogenesis r | 0.240 | 0.242 | 0.345 | 1.8e-38 | |
| TAIR|locus:2013021 | 625 | SERK1 "somatic embryogenesis r | 0.240 | 0.243 | 0.333 | 1.2e-37 | |
| TAIR|locus:2146102 | 638 | NIK1 "NSP-interacting kinase 1 | 0.236 | 0.233 | 0.323 | 1.5e-37 | |
| TAIR|locus:2157042 | 953 | AT5G49760 [Arabidopsis thalian | 0.201 | 0.133 | 0.362 | 4.8e-37 |
| TAIR|locus:2059703 AT2G01820 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 389 (142.0 bits), Expect = 7.7e-90, Sum P(4) = 7.7e-90
Identities = 77/135 (57%), Positives = 101/135 (74%)
Query: 501 DVARGDDMR--VADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFG 558
++ GDDMR V+DFGLVRL P+ GK+SI T+VAGTFGYLAPEY VTGR+T KVD++S G
Sbjct: 719 NILLGDDMRAKVSDFGLVRLAPD-GKYSIETRVAGTFGYLAPEYAVTGRVTTKVDIFSLG 777
Query: 559 MILMDLITGRKVVDATHSDPEYIIHLATWFQKM--HKNHDTFQMAIDKTIQLDEENLANV 616
+ILM+LITGRK +D T PE +HL TWF+++ K+ + F+ AID I LD++ +A++
Sbjct: 778 VILMELITGRKALDETQ--PEDSVHLVTWFRRVAASKDENAFKNAIDPNISLDDDTVASI 835
Query: 617 STVAELGDHCCANEP 631
V EL HCCA EP
Sbjct: 836 EKVWELAGHCCAREP 850
|
|
| TAIR|locus:2013825 TMK1 "transmembrane kinase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 432 (157.1 bits), Expect = 9.5e-89, Sum P(5) = 9.5e-89
Identities = 89/134 (66%), Positives = 105/134 (78%)
Query: 501 DVARGDDMR--VADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFG 558
++ GDDMR VADFGLVRL PE GK SI T++AGTFGYLAPEY VTGR+T KVDVYSFG
Sbjct: 722 NILLGDDMRAKVADFGLVRLAPE-GKGSIETRIAGTFGYLAPEYAVTGRVTTKVDVYSFG 780
Query: 559 MILMDLITGRKVVDATHSDPEYIIHLATWFQKMHKNHD-TFQMAIDKTIQLDEENLANVS 617
+ILM+LITGRK +D S PE IHL +WF++M+ N + +F+ AID TI LDEE LA+V
Sbjct: 781 VILMELITGRKSLD--ESQPEESIHLVSWFKRMYINKEASFKKAIDTTIDLDEETLASVH 838
Query: 618 TVAELGDHCCANEP 631
TVAEL HCCA EP
Sbjct: 839 TVAELAGHCCAREP 852
|
|
| TAIR|locus:2024016 AT1G24650 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 393 (143.4 bits), Expect = 5.4e-75, Sum P(3) = 5.4e-75
Identities = 77/133 (57%), Positives = 101/133 (75%)
Query: 501 DVARGDDM--RVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFG 558
++ GDDM +VADFGLVRL PE G SI TK+AGTFGYLAPEY VTGR+T KVDVYSFG
Sbjct: 681 NILLGDDMHAKVADFGLVRLAPE-GTQSIETKIAGTFGYLAPEYAVTGRVTTKVDVYSFG 739
Query: 559 MILMDLITGRKVVDATHSDPEYIIHLATWFQKMHKNHDTFQMAIDKTIQLDEENLANVST 618
+ILM+L+TGRK +D S+ E +HLATWF++M N +F AID+ ++++EE L +++
Sbjct: 740 VILMELLTGRKALDVARSEEE--VHLATWFRRMFINKGSFPKAIDEAMEVNEETLRSINI 797
Query: 619 VAELGDHCCANEP 631
VAEL + C + EP
Sbjct: 798 VAELANQCSSREP 810
|
|
| TAIR|locus:2095188 AT3G23750 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 360 (131.8 bits), Expect = 2.4e-68, Sum P(3) = 2.4e-68
Identities = 69/133 (51%), Positives = 97/133 (72%)
Query: 501 DVARGDDMR--VADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFG 558
++ GDDMR VADFGLV+ P+ GK+S+ T++AGTFGYLAPEY TGR+T KVDVY+FG
Sbjct: 712 NILLGDDMRAKVADFGLVKNAPD-GKYSVETRLAGTFGYLAPEYAATGRVTTKVDVYAFG 770
Query: 559 MILMDLITGRKVVDATHSDPEYIIHLATWFQKMHKNHDTFQMAIDKTIQLDEENLANVST 618
++LM+++TGRK +D S P+ HL TWF+++ N + A+D+T++ DEE + ++
Sbjct: 771 VVLMEILTGRKALD--DSLPDERSHLVTWFRRILINKENIPKALDQTLEADEETMESIYR 828
Query: 619 VAELGDHCCANEP 631
VAEL HC A EP
Sbjct: 829 VAELAGHCTAREP 841
|
|
| TAIR|locus:2036636 NIK3 "NSP-interacting kinase 3" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 204 (76.9 bits), Expect = 2.5e-39, Sum P(4) = 2.5e-39
Identities = 53/157 (33%), Positives = 83/157 (52%)
Query: 63 AVMQDLKASFVIPKRLKWSDPDPCQWSHVICSDDGQVTNIELQDQNRKGTVPPILKKLSS 122
AV +L + + + + DPC W V C+D G V++++L Q+ GT+ P + L+
Sbjct: 41 AVKNELNDPYKVLENWDVNSVDPCSWRMVSCTD-GYVSSLDLPSQSLSGTLSPRIGNLTY 99
Query: 123 MAVMYLENNQLRGPIPSLVGSLEFFSAYEAN---ISGTIPDFIGTDTFPQLSYLDLGNNN 179
+ + L+NN + GPIP +G LE + + + +G IP +G L+YL L NN+
Sbjct: 100 LQSVVLQNNAITGPIPETIGRLEKLQSLDLSNNSFTGEIPASLGE--LKNLNYLRLNNNS 157
Query: 180 LQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFP 216
L GT P S + I L TL D+S +N L+G P
Sbjct: 158 LIGTCPESL----SKIEGL-TLVDIS--YNNLSGSLP 187
|
|
| TAIR|locus:2156992 AT5G49770 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 208 (78.3 bits), Expect = 1.3e-38, Sum P(4) = 1.3e-38
Identities = 56/164 (34%), Positives = 81/164 (49%)
Query: 61 DAAVMQDLKASFVIPKRLKWSDPDPC--QWSHVICSDDGQVTNIELQDQNRKGTVPPILK 118
D +Q LK + + W DPC +W + C++D +V +I L ++N KG +P +
Sbjct: 31 DFTALQALKNEWDTLSK-SWKSSDPCGTEWVGITCNNDNRVVSISLTNRNLKGKLPTEIS 89
Query: 119 KLSSMAVMYLENN-QLRGPIPSLVGSLE---FFSAYEANISGTIPDFIGTDTFPQLSYLD 174
LS + + L N +L GP+P+ +G+L F S +G IPD IG QL+ L
Sbjct: 90 TLSELQTLDLTGNPELSGPLPANIGNLRKLTFLSLMGCAFNGPIPDSIGN--LEQLTRLS 147
Query: 175 LGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVS 218
L N GTIP+S G LS L + N+L G PVS
Sbjct: 148 LNLNKFSGTIPASMG-------RLSKLYWFDIADNQLEGKLPVS 184
|
|
| TAIR|locus:2026097 SERK2 "somatic embryogenesis receptor-like kinase 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 216 (81.1 bits), Expect = 1.8e-38, Sum P(4) = 1.8e-38
Identities = 59/171 (34%), Positives = 94/171 (54%)
Query: 53 ASSNQSRPDAAVMQDLKASFVIPKRLKWS-DP---DPCQWSHVICSDDGQVTNIELQDQN 108
ASSN DA + L+A+ V P + S DP +PC W HV C+++ V ++L + +
Sbjct: 27 ASSNMEG-DA--LHSLRANLVDPNNVLQSWDPTLVNPCTWFHVTCNNENSVIRVDLGNAD 83
Query: 109 RKGTVPPILKKLSSMAVMYLENNQLRGPIPSLVGSLE---FFSAYEANISGTIPDFIGTD 165
G + P L +L ++ + L +N + GP+PS +G+L Y + +G IPD +G
Sbjct: 84 LSGQLVPQLGQLKNLQYLELYSNNITGPVPSDLGNLTNLVSLDLYLNSFTGPIPDSLGK- 142
Query: 166 TFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFP 216
F +L +L L NN+L G IP S ++N+ TL+ L L +N+L+G P
Sbjct: 143 LF-KLRFLRLNNNSLTGPIPMS-------LTNIMTLQVLDLSNNRLSGSVP 185
|
|
| TAIR|locus:2013021 SERK1 "somatic embryogenesis receptor-like kinase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 207 (77.9 bits), Expect = 1.2e-37, Sum P(4) = 1.2e-37
Identities = 57/171 (33%), Positives = 92/171 (53%)
Query: 53 ASSNQSRPDAAVMQDLKASFVIPKRLKWS-DP---DPCQWSHVICSDDGQVTNIELQDQN 108
AS+N DA + L+ + V P + S DP +PC W HV C+++ V ++L +
Sbjct: 24 ASANLEG-DA--LHTLRVTLVDPNNVLQSWDPTLVNPCTWFHVTCNNENSVIRVDLGNAE 80
Query: 109 RKGTVPPILKKLSSMAVMYLENNQLRGPIPSLVGSLE---FFSAYEANISGTIPDFIGTD 165
G + P L L ++ + L +N + GPIPS +G+L Y + SG IP+ +G
Sbjct: 81 LSGHLVPELGVLKNLQYLELYSNNITGPIPSNLGNLTNLVSLDLYLNSFSGPIPESLGK- 139
Query: 166 TFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFP 216
+L +L L NN+L G+IP S ++N++TL+ L L +N+L+G P
Sbjct: 140 -LSKLRFLRLNNNSLTGSIPMS-------LTNITTLQVLDLSNNRLSGSVP 182
|
|
| TAIR|locus:2146102 NIK1 "NSP-interacting kinase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 204 (76.9 bits), Expect = 1.5e-37, Sum P(4) = 1.5e-37
Identities = 54/167 (32%), Positives = 82/167 (49%)
Query: 61 DAAVMQDLKASFVIPKRL--KWS-DP-DPCQWSHVICSDDGQVTNIELQDQNRKGTVPPI 116
+ + D+KAS P + W D DPC W+ V CS + V + QN GT+ P
Sbjct: 41 EVQALMDIKASLHDPHGVLDNWDRDAVDPCSWTMVTCSSENFVIGLGTPSQNLSGTLSPS 100
Query: 117 LKKLSSMAVMYLENNQLRGPIPSLVGSLEFFSAYEAN---ISGTIPDFIGTDTFPQLSYL 173
+ L+++ ++ L+NN ++G IP+ +G L + + G IP +G L YL
Sbjct: 101 ITNLTNLRIVLLQNNNIKGKIPAEIGRLTRLETLDLSDNFFHGEIPFSVGY--LQSLQYL 158
Query: 174 DLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSF 220
L NN+L G P S +SN++ L L L +N L+G PV F
Sbjct: 159 RLNNNSLSGVFPLS-------LSNMTQLAFLDLSYNNLSG--PVPRF 196
|
|
| TAIR|locus:2157042 AT5G49760 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 198 (74.8 bits), Expect = 4.8e-37, Sum P(4) = 4.8e-37
Identities = 49/135 (36%), Positives = 71/135 (52%)
Query: 497 NIALDVARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYS 556
NI LD +VADFGL +LV + K + T+V GT GYL PEY +T ++T K DVY
Sbjct: 760 NILLD--ENLTAKVADFGLSKLVGDPEKTHVTTQVKGTMGYLDPEYYMTNQLTEKSDVYG 817
Query: 557 FGMILMDLITGRKVVDATHSDPEYIIH-LATWFQKMHKNHDTFQMAIDKTIQLDEENLAN 615
FG++L++L+TGR ++ +Y++ + T K +D Q +D TI NL
Sbjct: 818 FGVVLLELLTGRSPIERG----KYVVREVKTKMNKSRSLYD-LQELLDTTIIASSGNLKG 872
Query: 616 VSTVAELGDHCCANE 630
+L C E
Sbjct: 873 FEKYVDLALRCVEEE 887
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 631 | |||
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 3e-21 | |
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 2e-17 | |
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 2e-17 | |
| cd00180 | 215 | cd00180, PKc, Catalytic domain of Protein Kinases | 4e-16 | |
| pfam00069 | 260 | pfam00069, Pkinase, Protein kinase domain | 4e-16 | |
| smart00221 | 258 | smart00221, STYKc, Protein kinase; unclassified sp | 2e-11 | |
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 2e-11 | |
| smart00219 | 257 | smart00219, TyrKc, Tyrosine kinase, catalytic doma | 9e-11 | |
| cd00192 | 262 | cd00192, PTKc, Catalytic domain of Protein Tyrosin | 1e-10 | |
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 3e-10 | |
| pfam07714 | 258 | pfam07714, Pkinase_Tyr, Protein tyrosine kinase | 3e-10 | |
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 2e-09 | |
| smart00220 | 254 | smart00220, S_TKc, Serine/Threonine protein kinase | 3e-09 | |
| pfam13855 | 60 | pfam13855, LRR_8, Leucine rich repeat | 6e-09 | |
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 4e-08 | |
| cd05071 | 262 | cd05071, PTKc_Src, Catalytic domain of the Protein | 6e-08 | |
| cd05069 | 260 | cd05069, PTKc_Yes, Catalytic domain of the Protein | 8e-08 | |
| cd05034 | 261 | cd05034, PTKc_Src_like, Catalytic domain of Src ki | 1e-07 | |
| cd05148 | 261 | cd05148, PTKc_Srm_Brk, Catalytic domain of the Pro | 1e-07 | |
| cd06606 | 260 | cd06606, STKc_MAPKKK, Catalytic domain of the Prot | 4e-07 | |
| cd05070 | 260 | cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Pro | 5e-07 | |
| cd05067 | 260 | cd05067, PTKc_Lck_Blk, Catalytic domain of the Pro | 2e-06 | |
| COG0515 | 384 | COG0515, SPS1, Serine/threonine protein kinase [Ge | 2e-06 | |
| cd06606 | 260 | cd06606, STKc_MAPKKK, Catalytic domain of the Prot | 4e-06 | |
| cd05041 | 251 | cd05041, PTKc_Fes_like, Catalytic domain of Fes-li | 6e-06 | |
| cd05122 | 253 | cd05122, PKc_STE, Catalytic domain of STE family P | 9e-06 | |
| cd05068 | 261 | cd05068, PTKc_Frk_like, Catalytic domain of Fyn-re | 1e-05 | |
| cd05578 | 258 | cd05578, STKc_Yank1, Catalytic domain of the Prote | 1e-05 | |
| cd05123 | 250 | cd05123, STKc_AGC, Catalytic domain of AGC family | 1e-05 | |
| cd07849 | 336 | cd07849, STKc_ERK1_2_like, Catalytic domain of Ext | 2e-05 | |
| cd05040 | 257 | cd05040, PTKc_Ack_like, Catalytic domain of the Pr | 2e-05 | |
| cd05073 | 260 | cd05073, PTKc_Hck, Catalytic domain of the Protein | 3e-05 | |
| cd08215 | 258 | cd08215, STKc_Nek, Catalytic domain of the Protein | 4e-05 | |
| COG4886 | 394 | COG4886, COG4886, Leucine-rich repeat (LRR) protei | 4e-05 | |
| TIGR03903 | 1266 | TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclas | 6e-05 | |
| cd07852 | 337 | cd07852, STKc_MAPK15, Catalytic domain of the Seri | 8e-05 | |
| cd05072 | 261 | cd05072, PTKc_Lyn, Catalytic domain of the Protein | 8e-05 | |
| cd05577 | 277 | cd05577, STKc_GRK, Catalytic domain of the Protein | 8e-05 | |
| cd05632 | 285 | cd05632, STKc_GRK5, Catalytic domain of the Protei | 9e-05 | |
| cd05059 | 256 | cd05059, PTKc_Tec_like, Catalytic domain of Tec-li | 1e-04 | |
| cd05630 | 285 | cd05630, STKc_GRK6, Catalytic domain of the Protei | 2e-04 | |
| cd06627 | 254 | cd06627, STKc_Cdc7_like, Catalytic domain of Cell | 2e-04 | |
| cd07858 | 337 | cd07858, STKc_TEY_MAPK_plant, Catalytic domain of | 2e-04 | |
| cd05045 | 290 | cd05045, PTKc_RET, Catalytic domain of the Protein | 2e-04 | |
| cd05048 | 283 | cd05048, PTKc_Ror, Catalytic Domain of the Protein | 2e-04 | |
| cd05058 | 262 | cd05058, PTKc_Met_Ron, Catalytic domain of the Pro | 3e-04 | |
| cd05605 | 285 | cd05605, STKc_GRK4_like, Catalytic domain of G pro | 4e-04 | |
| cd07851 | 343 | cd07851, STKc_p38, Catalytic domain of the Serine/ | 4e-04 | |
| cd08529 | 256 | cd08529, STKc_FA2-like, Catalytic domain of the Pr | 4e-04 | |
| cd06610 | 267 | cd06610, STKc_OSR1_SPAK, Catalytic domain of the P | 5e-04 | |
| cd05112 | 256 | cd05112, PTKc_Itk, Catalytic domain of the Protein | 5e-04 | |
| cd05057 | 279 | cd05057, PTKc_EGFR_like, Catalytic domain of Epide | 5e-04 | |
| cd06620 | 284 | cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of | 6e-04 | |
| cd06605 | 265 | cd06605, PKc_MAPKK, Catalytic domain of the dual-s | 6e-04 | |
| pfam13855 | 60 | pfam13855, LRR_8, Leucine rich repeat | 7e-04 | |
| COG4886 | 394 | COG4886, COG4886, Leucine-rich repeat (LRR) protei | 7e-04 | |
| pfam12799 | 43 | pfam12799, LRR_4, Leucine Rich repeats (2 copies) | 8e-04 | |
| cd08528 | 269 | cd08528, STKc_Nek10, Catalytic domain of the Prote | 8e-04 | |
| cd05581 | 280 | cd05581, STKc_PDK1, Catalytic domain of the Protei | 9e-04 | |
| cd05118 | 283 | cd05118, STKc_CMGC, Catalytic domain of CMGC famil | 0.001 | |
| cd07843 | 293 | cd07843, STKc_CDC2L1, Catalytic domain of the Seri | 0.001 | |
| cd05039 | 256 | cd05039, PTKc_Csk_like, Catalytic domain of C-term | 0.001 | |
| cd05081 | 284 | cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) | 0.002 | |
| cd05631 | 285 | cd05631, STKc_GRK4, Catalytic domain of the Protei | 0.002 | |
| cd08221 | 256 | cd08221, STKc_Nek9, Catalytic domain of the Protei | 0.002 | |
| cd05111 | 279 | cd05111, PTK_HER3, Pseudokinase domain of the Prot | 0.002 | |
| cd05032 | 277 | cd05032, PTKc_InsR_like, Catalytic domain of Insul | 0.002 | |
| pfam12799 | 43 | pfam12799, LRR_4, Leucine Rich repeats (2 copies) | 0.003 | |
| cd05611 | 260 | cd05611, STKc_Rim15_like, Catalytic domain of fung | 0.003 | |
| pfam08263 | 42 | pfam08263, LRRNT_2, Leucine rich repeat N-terminal | 0.003 | |
| cd06626 | 264 | cd06626, STKc_MEKK4, Catalytic domain of the Prote | 0.003 | |
| cd06618 | 296 | cd06618, PKc_MKK7, Catalytic domain of the dual-sp | 0.003 | |
| cd05616 | 323 | cd05616, STKc_cPKC_beta, Catalytic domain of the P | 0.004 | |
| cd05592 | 316 | cd05592, STKc_nPKC_theta_delta, Catalytic domain o | 0.004 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 98.4 bits (245), Expect = 3e-21
Identities = 153/576 (26%), Positives = 241/576 (41%), Gaps = 95/576 (16%)
Query: 102 IELQDQNRKGTVPPILKKLSSMAVMYLENNQLRGPIPSL---VGSLEFFSAYEANISGTI 158
+ LQD + G +P KL + + + NN L+G I S + SL+ S G +
Sbjct: 409 VRLQDNSFSGELPSEFTKLPLVYFLDISNNNLQGRINSRKWDMPSLQMLSLARNKFFGGL 468
Query: 159 PDFIGTDTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVS 218
PD G+ +L LDL N G +P G +LS L L L NKL+G P
Sbjct: 469 PDSFGSK---RLENLDLSRNQFSGAVPRKLG-------SLSELMQLKLSENKLSGEIP-D 517
Query: 219 SFNNHPKLTTLNLTNNLLQGPTPRFNNSKLTVDMRTGSNCFCLDDPGLACDSRVNILLS- 277
++ KL +L+L++N L G P + S++ V L L+ + LS
Sbjct: 518 ELSSCKKLVSLDLSHNQLSGQIPA-SFSEMPV----------LSQLDLSQNQ-----LSG 561
Query: 278 -IAESMGYPEVLAESRKGNDPCPTYKYWKGISCDIGGNITENVVVITDGNPDVEKESNSP 336
I +++G E L + ++ + G G + N + GN D+ +
Sbjct: 562 EIPKNLGNVESLVQVNISHN------HLHGSLPSTGAFLAINASAVA-GNIDLCGGDTTS 614
Query: 337 GSPPGSG-SKIQILGITLGSVIGDFCGLFVVGLGVFLYIRNKKSSETVPIQVLRPRICGI 395
G PP K + +G F L +V G F++IR + + E R+
Sbjct: 615 GLPPCKRVRKTPSWWFYITCTLGAFLVLALVAFG-FVFIRGRNNLEL-------KRVENE 666
Query: 396 SVVHSVDFGDMAIPIQVLRNAT-NNFSEENRLGRGGVGTVYKGE-LKDGTEVGVKRM-EL 452
+ F D + + N ++ EEN + RG G YKG+ +K+G + VK + ++
Sbjct: 667 DGTWELQFFDSKVSKSITINDILSSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDV 726
Query: 453 GSVTEQGIAQFES-------EITVLTKGTLGRHLFNWEEEG------LEPLEWNTRLNIA 499
S+ IA ++ L + G +L + EG L L W R IA
Sbjct: 727 NSIPSSEIADMGKLQHPNIVKLIGLCRSEKGAYLIHEYIEGKNLSEVLRNLSWERRRKIA 786
Query: 500 LDVA---RGDDMRVADFGLV-RLVPEN----GK---HSIL---------TKVAGTFGYLA 539
+ +A R R + +V L PE GK H L TK + Y+A
Sbjct: 787 IGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLRLSLPGLLCTDTKCFISSAYVA 846
Query: 540 PEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIH--LATWFQKMHKN-HD 596
PE T IT K D+Y FG+IL++L+TG+ + +D E+ +H + W + + + H
Sbjct: 847 PETRETKDITEKSDIYGFGLILIELLTGK-----SPADAEFGVHGSIVEWARYCYSDCH- 900
Query: 597 TFQMAIDKTIQLDEE-NLANVSTVAELGDHCCANEP 631
M ID +I+ D N + V L HC A +P
Sbjct: 901 -LDMWIDPSIRGDVSVNQNEIVEVMNLALHCTATDP 935
|
Length = 968 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 86.4 bits (214), Expect = 2e-17
Identities = 58/166 (34%), Positives = 80/166 (48%), Gaps = 16/166 (9%)
Query: 81 SDPDPCQWSHVICSDDGQVTNIELQDQNRKGTVPPILKKLSSMAVMYLENNQLRGPIP-- 138
S D C W + C++ +V +I+L +N G + + +L + + L NNQL GPIP
Sbjct: 53 SSADVCLWQGITCNNSSRVVSIDLSGKNISGKISSAIFRLPYIQTINLSNNQLSGPIPDD 112
Query: 139 --SLVGSLEFFSAYEANISGTIPDFIGTDTFPQLSYLDLGNNNLQGTIPSSFGMPFADIS 196
+ SL + + N +G+IP + P L LDL NN L G IP DI
Sbjct: 113 IFTTSSSLRYLNLSNNNFTGSIP----RGSIPNLETLDLSNNMLSGEIP-------NDIG 161
Query: 197 NLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNNLLQGPTPR 242
+ S+L+ L LG N L G P S N L L L +N L G PR
Sbjct: 162 SFSSLKVLDLGGNVLVGKIPN-SLTNLTSLEFLTLASNQLVGQIPR 206
|
Length = 968 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 86.1 bits (213), Expect = 2e-17
Identities = 56/134 (41%), Positives = 74/134 (55%), Gaps = 13/134 (9%)
Query: 111 GTVPPILKKLSSMAVMYLENNQLRGPIPSLVG---SLEFFSAYEANISGTIPDFIGTDTF 167
G +P L L+S+ + L +NQL G IP +G SL++ N+SG IP IG T
Sbjct: 178 GKIPNSLTNLTSLEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNLSGEIPYEIGGLT- 236
Query: 168 PQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLT 227
L++LDL NNL G IPSS G NL L+ L L NKL+G P S F+ KL
Sbjct: 237 -SLNHLDLVYNNLTGPIPSSLG-------NLKNLQYLFLYQNKLSGPIPPSIFSLQ-KLI 287
Query: 228 TLNLTNNLLQGPTP 241
+L+L++N L G P
Sbjct: 288 SLDLSDNSLSGEIP 301
|
Length = 968 |
| >gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases | Back alignment and domain information |
|---|
Score = 77.3 bits (191), Expect = 4e-16
Identities = 50/210 (23%), Positives = 79/210 (37%), Gaps = 63/210 (30%)
Query: 426 LGRGGVGTVYKGE-LKDGTEVGVKRMELGSVTEQGIAQFESEITVLTK------------ 472
LG GG GTVY K G +V +K ++ + + + EI +L K
Sbjct: 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSL-LEELLREIEILKKLNHPNIVKLYGV 59
Query: 473 ----------------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG----------- 505
G+L L E L + L I L + G
Sbjct: 60 FEDENHLYLVMEYCEGGSLKDLLKENEG----KLSEDEILRILLQILEGLEYLHSNGIIH 115
Query: 506 --------------DDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYI-VTGRITA 550
+++ADFGL +L+ + S+L + GT Y+APE + G +
Sbjct: 116 RDLKPENILLDSDNGKVKLADFGLSKLLTSDK--SLLKTIVGTPAYMAPEVLLGKGYYSE 173
Query: 551 KVDVYSFGMILMDLITGRKVVDA-THSDPE 579
K D++S G+IL +L + ++ DPE
Sbjct: 174 KSDIWSLGVILYELPELKDLIRKMLQKDPE 203
|
Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215 |
| >gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain | Back alignment and domain information |
|---|
Score = 78.4 bits (194), Expect = 4e-16
Identities = 55/194 (28%), Positives = 79/194 (40%), Gaps = 53/194 (27%)
Query: 425 RLGRGGVGTVYKG-ELKDGTEVGVKRMELGSVTEQGIAQFESEITVL------------- 470
+LG G GTVYK G V VK ++ S + EI +L
Sbjct: 6 KLGSGSFGTVYKAKHKGTGKIVAVKILKKRSEKSKKDQTARREIRILRRLSHPNIVRLID 65
Query: 471 ---TKGTL--------GRHLFNWEEEGLEPLEWNTRLNIALDVARG-------------- 505
K L G LF++ G PL + IAL + RG
Sbjct: 66 AFEDKDHLYLVMEYCEGGDLFDYLSRGG-PLSEDEAKKIALQILRGLEYLHSNGIIHRDL 124
Query: 506 ----------DDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGR-ITAKVDV 554
+++ADFGL + + ++ S LT GT Y+APE ++ G KVDV
Sbjct: 125 KPENILLDENGVVKIADFGLAKKLLKSS--SSLTTFVGTPWYMAPEVLLGGNGYGPKVDV 182
Query: 555 YSFGMILMDLITGR 568
+S G+IL +L+TG+
Sbjct: 183 WSLGVILYELLTGK 196
|
Length = 260 |
| >gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Score = 64.1 bits (157), Expect = 2e-11
Identities = 49/199 (24%), Positives = 78/199 (39%), Gaps = 64/199 (32%)
Query: 426 LGRGGVGTVYKGELKDG-----TEVGVKRMELGSVTEQGIAQFESEITVLTK-------- 472
LG G G VYKG LK EV VK + +EQ I +F E ++ K
Sbjct: 7 LGEGAFGEVYKGTLKGKGDGKEVEVAVKTL-KEDASEQQIEEFLREARIMRKLDHPNIVK 65
Query: 473 --------------------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------- 505
G L +L + + L + L+ AL +ARG
Sbjct: 66 LLGVCTEEEPLMIVMEYMPGGDLLDYL---RKNRPKELSLSDLLSFALQIARGMEYLESK 122
Query: 506 -----------------DDMRVADFGLVRLVPENG-KHSILTKVAGTFGYLAPEYIVTGR 547
++++DFGL R + ++ K+ ++APE + G+
Sbjct: 123 NFIHRDLAARNCLVGENLVVKISDFGLSRDLYDDDYYKVKGGKL--PIRWMAPESLKEGK 180
Query: 548 ITAKVDVYSFGMILMDLIT 566
T+K DV+SFG++L ++ T
Sbjct: 181 FTSKSDVWSFGVLLWEIFT 199
|
Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 66.4 bits (162), Expect = 2e-11
Identities = 52/196 (26%), Positives = 80/196 (40%), Gaps = 41/196 (20%)
Query: 49 KIPSASSNQSRPDAAVMQDLKASFVIPKRLKWSDPDPC-----QWSHVICSDDGQ----- 98
+I +A S + + +Q LK+S +P R W+ DPC WS C D
Sbjct: 361 EIITAESKTLLEEVSALQTLKSSLGLPLRFGWNG-DPCVPQQHPWSGADCQFDSTKGKWF 419
Query: 99 VTNIELQDQNRKGTVPPILKKLSSMAVMYLENNQLRGPIPSLVGSLEFFSAYEANISGTI 158
+ + L +Q +G +P + KL + + L N +RG IP +GS+
Sbjct: 420 IDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSI-------------- 465
Query: 159 PDFIGTDTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVS 218
L LDL N+ G+IP S G L++L L+L N L+G P +
Sbjct: 466 ---------TSLEVLDLSYNSFNGSIPESLG-------QLTSLRILNLNGNSLSGRVPAA 509
Query: 219 SFNNHPKLTTLNLTNN 234
+ N T+N
Sbjct: 510 LGGRLLHRASFNFTDN 525
|
Length = 623 |
| >gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain | Back alignment and domain information |
|---|
Score = 62.5 bits (153), Expect = 9e-11
Identities = 51/202 (25%), Positives = 78/202 (38%), Gaps = 71/202 (35%)
Query: 426 LGRGGVGTVYKGELKD-----GTEVGVKRMELGSVTEQGIAQFESEITVLTK-------- 472
LG G G VYKG+LK EV VK ++ + +EQ I +F E ++ K
Sbjct: 7 LGEGAFGEVYKGKLKGKGGKKKVEVAVKTLKEDA-SEQQIEEFLREARIMRKLDHPNVVK 65
Query: 473 --------------------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARGDDM---- 508
G L +L + L + L+ AL +ARG M
Sbjct: 66 LLGVCTEEEPLYIVMEYMEGGDLLSYL----RKNRPKLSLSDLLSFALQIARG--MEYLE 119
Query: 509 ----------------------RVADFGLVRLVPENGKHSILTKVAGTFGY--LAPEYIV 544
+++DFGL R + + K G +APE +
Sbjct: 120 SKNFIHRDLAARNCLVGENLVVKISDFGLSRDLYD---DDYYRKRGGKLPIRWMAPESLK 176
Query: 545 TGRITAKVDVYSFGMILMDLIT 566
G+ T+K DV+SFG++L ++ T
Sbjct: 177 EGKFTSKSDVWSFGVLLWEIFT 198
|
Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257 |
| >gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 62.2 bits (152), Expect = 1e-10
Identities = 48/199 (24%), Positives = 75/199 (37%), Gaps = 62/199 (31%)
Query: 424 NRLGRGGVGTVYKGELKDG----TEVGVKRMELGSVTEQGIAQFESEITVLTK------- 472
+LG G G VYKG+LK TEV VK + +E+ F E V+ K
Sbjct: 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTL-KEDASEEERKDFLKEARVMKKLGHPNVV 59
Query: 473 ---------------------GTLGRHL----FNWEEEGLEPLEWNTRLNIALDVARG-- 505
G L +L + L L+ A+ +A+G
Sbjct: 60 RLLGVCTEEEPLYLVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGME 119
Query: 506 --------------------DD--MRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYI 543
+D ++++DFGL R V ++ + T ++APE +
Sbjct: 120 YLASKKFVHRDLAARNCLVGEDLVVKISDFGLSRDVYDDDYYRKKTGGKLPIRWMAPESL 179
Query: 544 VTGRITAKVDVYSFGMILM 562
G T+K DV+SFG +L+
Sbjct: 180 KDGIFTSKSDVWSFG-VLL 197
|
Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 63.3 bits (154), Expect = 3e-10
Identities = 52/172 (30%), Positives = 80/172 (46%), Gaps = 16/172 (9%)
Query: 76 KRLKWSDPDPCQWSHVICSDDGQVTNIELQD---QNRKGTVPPILKKLSSMAVMYLENNQ 132
K LKW S I + G +T++ D N G +P L L ++ ++L N+
Sbjct: 212 KSLKWIYLGYNNLSGEIPYEIGGLTSLNHLDLVYNNLTGPIPSSLGNLKNLQYLFLYQNK 271
Query: 133 LRGPIPSLVGSLEFFSAYEAN---ISGTIPDFIGTDTFPQLSYLDLGNNNLQGTIPSSFG 189
L GPIP + SL+ + + + +SG IP+ + L L L +NN G IP +
Sbjct: 272 LSGPIPPSIFSLQKLISLDLSDNSLSGEIPELVI--QLQNLEILHLFSNNFTGKIPVA-- 327
Query: 190 MPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNNLLQGPTP 241
+++L L+ L L NK +G P + H LT L+L+ N L G P
Sbjct: 328 -----LTSLPRLQVLQLWSNKFSGEIP-KNLGKHNNLTVLDLSTNNLTGEIP 373
|
Length = 968 |
| >gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase | Back alignment and domain information |
|---|
Score = 61.0 bits (149), Expect = 3e-10
Identities = 51/204 (25%), Positives = 80/204 (39%), Gaps = 72/204 (35%)
Query: 426 LGRGGVGTVYKGELKD-----GTEVGVKRMELGSVTEQGIAQFESEITVLTK-------- 472
LG G G VYKG LK T+V VK ++ G+ +E+ +F E +++ K
Sbjct: 7 LGEGAFGEVYKGTLKGDGEGTETKVAVKTLKEGA-SEEEREEFLEEASIMKKLSHPNIVR 65
Query: 473 --------------------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------- 505
G L L + E L L +AL +A+G
Sbjct: 66 LLGVCTQGEPLYIVTEYMPGGDLLDFL----RKHGEKLTLKDLLQMALQIAKGMEYLESK 121
Query: 506 ---------------DDMRV--ADFGLVRLVPENGKHSILTKVAGTFGYL-----APEYI 543
+++ V +DFGL R + E+ + G L APE +
Sbjct: 122 NFVHRDLAARNCLVTENLVVKISDFGLSRDIYEDDYY-----RKRGGGKLPIKWMAPESL 176
Query: 544 VTGRITAKVDVYSFGMILMDLITG 567
G+ T+K DV+SFG++L ++ T
Sbjct: 177 KDGKFTSKSDVWSFGVLLWEIFTL 200
|
Length = 258 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 60.6 bits (147), Expect = 2e-09
Identities = 41/144 (28%), Positives = 61/144 (42%), Gaps = 31/144 (21%)
Query: 98 QVTNIELQDQNRKGTVPPILKKLSSMAVMYLENNQLRGPIPSLVGSLEFFSAYEANISGT 157
++ N++L G VP L LS + + L N+L G IP + S +
Sbjct: 476 RLENLDLSRNQFSGAVPRKLGSLSELMQLKLSENKLSGEIPDELSSCK------------ 523
Query: 158 IPDFIGTDTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPV 217
+L LDL +N L G IP+SF S + L L L N+L+G P
Sbjct: 524 -----------KLVSLDLSHNQLSGQIPASF-------SEMPVLSQLDLSQNQLSGEIP- 564
Query: 218 SSFNNHPKLTTLNLTNNLLQGPTP 241
+ N L +N+++N L G P
Sbjct: 565 KNLGNVESLVQVNISHNHLHGSLP 588
|
Length = 968 |
| >gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain | Back alignment and domain information |
|---|
Score = 57.9 bits (141), Expect = 3e-09
Identities = 28/72 (38%), Positives = 41/72 (56%), Gaps = 5/72 (6%)
Query: 497 NIALDVARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYS 556
NI LD +++ADFGL R + K LT GT Y+APE ++ VD++S
Sbjct: 127 NILLD--EDGHVKLADFGLARQLDPGEK---LTTFVGTPEYMAPEVLLGKGYGKAVDIWS 181
Query: 557 FGMILMDLITGR 568
G+IL +L+TG+
Sbjct: 182 LGVILYELLTGK 193
|
Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254 |
| >gnl|CDD|206026 pfam13855, LRR_8, Leucine rich repeat | Back alignment and domain information |
|---|
Score = 52.2 bits (126), Expect = 6e-09
Identities = 24/68 (35%), Positives = 31/68 (45%), Gaps = 8/68 (11%)
Query: 169 QLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTT 228
L LDL NN L +F L L+ L L N LT I P +F+ P L +
Sbjct: 1 NLKSLDLSNNRLTVIPDGAF-------KGLPNLKVLDLSGNNLTSISP-EAFSGLPSLRS 52
Query: 229 LNLTNNLL 236
L+L+ N L
Sbjct: 53 LDLSGNNL 60
|
Length = 60 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 56.4 bits (136), Expect = 4e-08
Identities = 42/158 (26%), Positives = 69/158 (43%), Gaps = 23/158 (14%)
Query: 101 NIELQDQNRKGTVPPILKKLSSMAVMYLENNQLRGPIPSLVGSL---EFFSAYEANISGT 157
+++L D + G +P ++ +L ++ +++L +N G IP + SL + + SG
Sbjct: 288 SLDLSDNSLSGEIPELVIQLQNLEILHLFSNNFTGKIPVALTSLPRLQVLQLWSNKFSGE 347
Query: 158 IPDFIGTDTFPQLSYLDLGNNNLQGTIPSSF-----------------GMPFADISNLST 200
IP +G L+ LDL NNL G IP G + +
Sbjct: 348 IPKNLGKHN--NLTVLDLSTNNLTGEIPEGLCSSGNLFKLILFSNSLEGEIPKSLGACRS 405
Query: 201 LEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNNLLQG 238
L + L N +G P S F P + L+++NN LQG
Sbjct: 406 LRRVRLQDNSFSGELP-SEFTKLPLVYFLDISNNNLQG 442
|
Length = 968 |
| >gnl|CDD|133202 cd05071, PTKc_Src, Catalytic domain of the Protein Tyrosine Kinase, Src | Back alignment and domain information |
|---|
Score = 54.3 bits (130), Expect = 6e-08
Identities = 48/193 (24%), Positives = 86/193 (44%), Gaps = 46/193 (23%)
Query: 423 ENRLGRGGVGTVYKGELKDGTEVGVKRMELGSVTEQGIAQ-------------------- 462
E +LG+G G V+ G T V +K ++ G+++ + Q
Sbjct: 11 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 70
Query: 463 FESEITVLT------------KGTLGRHL-----FNWEEEGLEPLEWNTRLNI------A 499
E I ++T KG +G++L + + + + R+N A
Sbjct: 71 SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRA 130
Query: 500 LDVARGDDM--RVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSF 557
++ G+++ +VADFGL RL+ +N +++ + APE + GR T K DV+SF
Sbjct: 131 ANILVGENLVCKVADFGLARLIEDN-EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSF 189
Query: 558 GMILMDLITGRKV 570
G++L +L T +V
Sbjct: 190 GILLTELTTKGRV 202
|
Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Src also play a role in regulating cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Elevated levels of Src kinase activity have been reported in a variety of human cancers. Several inhibitors of Src have been developed as anti-cancer drugs. Src is also implicated in acute inflammatory responses and osteoclast function. Length = 262 |
| >gnl|CDD|133200 cd05069, PTKc_Yes, Catalytic domain of the Protein Tyrosine Kinase, Yes | Back alignment and domain information |
|---|
Score = 53.5 bits (128), Expect = 8e-08
Identities = 48/193 (24%), Positives = 89/193 (46%), Gaps = 46/193 (23%)
Query: 423 ENRLGRGGVGTVYKGELKDGTEVGVKRMELGSVTEQGIAQ-------------------- 462
+ +LG+G G V+ G T+V +K ++ G++ + Q
Sbjct: 11 DVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGTMMPEAFLQEAQIMKKLRHDKLVPLYAVV 70
Query: 463 FESEITVLT----KGTL--------GRHL-----FNWEEEGLEPLEWNTRLNI------A 499
E I ++T KG+L G++L + + + + + R+N A
Sbjct: 71 SEEPIYIVTEFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMNYIHRDLRA 130
Query: 500 LDVARGDDM--RVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSF 557
++ GD++ ++ADFGL RL+ +N +++ + APE + GR T K DV+SF
Sbjct: 131 ANILVGDNLVCKIADFGLARLIEDN-EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSF 189
Query: 558 GMILMDLITGRKV 570
G++L +L+T +V
Sbjct: 190 GILLTELVTKGRV 202
|
Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. c-Yes kinase is the cellular homolog of the oncogenic protein (v-Yes) encoded by the Yamaguchi 73 and Esh sarcoma viruses. It displays functional overlap with other Src subfamily members, particularly Src. It also shows some unique functions such as binding to occludins, transmembrane proteins that regulate extracellular interactions in tight junctions. Yes also associates with a number of proteins in different cell types that Src does not interact with, like JAK2 and gp130 in pre-adipocytes, and Pyk2 in treated pulmonary vein endothelial cells. Although the biological function of Yes remains unclear, it appears to have a role in regulating cell-cell interactions and vesicle trafficking in polarized cells. Length = 260 |
| >gnl|CDD|173626 cd05034, PTKc_Src_like, Catalytic domain of Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 53.1 bits (128), Expect = 1e-07
Identities = 51/205 (24%), Positives = 83/205 (40%), Gaps = 62/205 (30%)
Query: 418 NNFSEENRLGRGGVGTVYKGELKDGTEVGVKRMELGSVTEQGIAQFESEIT--------- 468
+ E +LG G G V+ G T+V VK ++ G+++ + Q E++I
Sbjct: 6 ESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGTMSPEAFLQ-EAQIMKKLRHDKLV 64
Query: 469 -----------------VLTKGTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------ 505
++KG+L L EG + L +++A +A G
Sbjct: 65 QLYAVCSEEEPIYIVTEYMSKGSLLDFL--KSGEG-KKLRLPQLVDMAAQIAEGMAYLES 121
Query: 506 -----DDMR-------------VADFGLVRLVPENGKHSILTKVAGT---FGYLAPEYIV 544
D+ +ADFGL RL+ ++ T G + APE
Sbjct: 122 RNYIHRDLAARNILVGENLVCKIADFGLARLIEDD----EYTAREGAKFPIKWTAPEAAN 177
Query: 545 TGRITAKVDVYSFGMILMDLIT-GR 568
GR T K DV+SFG++L +++T GR
Sbjct: 178 YGRFTIKSDVWSFGILLTEIVTYGR 202
|
Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, and Lyn show a limited expression pattern. Length = 261 |
| >gnl|CDD|133248 cd05148, PTKc_Srm_Brk, Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk | Back alignment and domain information |
|---|
Score = 52.8 bits (127), Expect = 1e-07
Identities = 49/201 (24%), Positives = 82/201 (40%), Gaps = 63/201 (31%)
Query: 420 FSEENRLGRGGVGTVYKGELKDGTEVGVKRMELGSVTEQGIAQFESEITVL--------- 470
F+ E +LG G G V++G K+ V +K ++ + +Q F+ E+ L
Sbjct: 8 FTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQ--DFQKEVQALKRLRHKHLI 65
Query: 471 -------------------TKGTLGRHLFNWEEE--GLEPLEWNTRLNIALDVARG---- 505
KG+L L + E + + L +++A VA G
Sbjct: 66 SLFAVCSVGEPVYIITELMEKGSLLAFLRSPEGQVLPVASL-----IDMACQVAEGMAYL 120
Query: 506 ------------------DDM--RVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVT 545
+D+ +VADFGL RL+ E+ S K+ + + APE
Sbjct: 121 EEQNSIHRDLAARNILVGEDLVCKVADFGLARLIKEDVYLSSDKKIP--YKWTAPEAASH 178
Query: 546 GRITAKVDVYSFGMILMDLIT 566
G + K DV+SFG++L ++ T
Sbjct: 179 GTFSTKSDVWSFGILLYEMFT 199
|
Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Srm and Brk however, lack the N-terminal myristylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Brk has been found to be overexpressed in a majority of breast tumors. Length = 261 |
| >gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase | Back alignment and domain information |
|---|
Score = 51.4 bits (124), Expect = 4e-07
Identities = 16/62 (25%), Positives = 30/62 (48%)
Query: 509 RVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGR 568
++ADFG + + + V GT ++APE I D++S G ++++ TG+
Sbjct: 141 KLADFGCAKRLGDIETGEGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGK 200
Query: 569 KV 570
Sbjct: 201 PP 202
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260 |
| >gnl|CDD|133201 cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk | Back alignment and domain information |
|---|
Score = 51.2 bits (122), Expect = 5e-07
Identities = 50/193 (25%), Positives = 87/193 (45%), Gaps = 46/193 (23%)
Query: 423 ENRLGRGGVGTVYKGELKDGTEVGVKRMELGSVTEQGI---AQF---------------- 463
+LG G G V+ G T+V VK ++ G+++ + AQ
Sbjct: 11 IKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTMSPESFLEEAQIMKKLRHDKLVQLYAVV 70
Query: 464 -ESEITVLT----KGTL--------GR-----HLFNWEEEGLEPLEWNTRLNI------A 499
E I ++T KG+L GR +L + + + + R+N +
Sbjct: 71 SEEPIYIVTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRS 130
Query: 500 LDVARGDDM--RVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSF 557
++ GD + ++ADFGL RL+ +N +++ + APE + GR T K DV+SF
Sbjct: 131 ANILVGDGLVCKIADFGLARLIEDN-EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSF 189
Query: 558 GMILMDLITGRKV 570
G++L +L+T +V
Sbjct: 190 GILLTELVTKGRV 202
|
Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Fyn, together with Lck, plays a critical role in T-cell signal transduction by phosphorylating ITAM (immunoreceptor tyr activation motif) sequences on T-cell receptors, ultimately leading to the proliferation and differentiation of T-cells. In addition, Fyn is involved in the myelination of neurons, and is implicated in Alzheimer's and Parkinson's diseases. Yrk has been detected only in chickens. It is primarily found in neuronal and epithelial cells and in macrophages. It may play a role in inflammation and in response to injury. Length = 260 |
| >gnl|CDD|173640 cd05067, PTKc_Lck_Blk, Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk | Back alignment and domain information |
|---|
Score = 49.9 bits (119), Expect = 2e-06
Identities = 50/213 (23%), Positives = 91/213 (42%), Gaps = 48/213 (22%)
Query: 418 NNFSEENRLGRGGVGTVYKGELKDGTEVGVKRMELGSVTEQG-------IAQFESE---- 466
+LG G G V+ G T+V +K ++ GS++ + + Q +
Sbjct: 6 ETLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGSMSPEAFLAEANLMKQLQHPRLVR 65
Query: 467 ---------ITVLTKGTLGRHLFNW--EEEGLEPLEWNTRLNIALDVARG---------- 505
I ++T+ L ++ EG++ L N +++A +A G
Sbjct: 66 LYAVVTQEPIYIITEYMENGSLVDFLKTPEGIK-LTINKLIDMAAQIAEGMAFIERKNYI 124
Query: 506 -DDMR-------------VADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAK 551
D+R +ADFGL RL+ E+ +++ + APE I G T K
Sbjct: 125 HRDLRAANILVSETLCCKIADFGLARLI-EDNEYTAREGAKFPIKWTAPEAINYGTFTIK 183
Query: 552 VDVYSFGMILMDLITGRKVVDATHSDPEYIIHL 584
DV+SFG++L +++T ++ ++PE I +L
Sbjct: 184 SDVWSFGILLTEIVTYGRIPYPGMTNPEVIQNL 216
|
Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lck is expressed in T-cells and natural killer (NK) cells. It plays a critical role in T-cell maturation, activation, and T-cell receptor (TCR) signaling. Lck phosphorylates ITAM (immunoreceptor tyr activation motif) sequences on several subunits of TCRs, leading to the activation of different second messenger cascades. Phosphorylated ITAMs serve as binding sites for other signaling factor such as Syk and ZAP-70, leading to their activation and propagation of downstream events. In addition, Lck regulates drug-induced apoptosis by interfering with the mitochondrial death pathway. The apototic role of Lck is independent of its primary function in T-cell signaling. Blk is expressed specifically in B-cells. It is involved in pre-BCR (B-cell receptor) signaling. Length = 260 |
| >gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Score = 50.1 bits (118), Expect = 2e-06
Identities = 27/79 (34%), Positives = 43/79 (54%), Gaps = 8/79 (10%)
Query: 497 NIALDVARGDDMRVADFGLVRLVPENGKHSI----LTKVAGTFGYLAPEYI---VTGRIT 549
NI LD G +++ DFGL +L+P+ G S + GT GY+APE + +
Sbjct: 131 NILLD-RDGRVVKLIDFGLAKLLPDPGSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYAS 189
Query: 550 AKVDVYSFGMILMDLITGR 568
+ D++S G+ L +L+TG
Sbjct: 190 SSSDIWSLGITLYELLTGL 208
|
Length = 384 |
| >gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase | Back alignment and domain information |
|---|
Score = 48.3 bits (116), Expect = 4e-06
Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Query: 424 NRLGRGGVGTVYKGELKD-GTEVGVKRMELGSVTEQGIAQFESEITVLTK 472
LGRG G+VY KD G + VK +EL +E+ + E EI +L+
Sbjct: 6 ELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSS 55
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260 |
| >gnl|CDD|173629 cd05041, PTKc_Fes_like, Catalytic domain of Fes-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 47.8 bits (114), Expect = 6e-06
Identities = 47/194 (24%), Positives = 77/194 (39%), Gaps = 55/194 (28%)
Query: 425 RLGRGGVGTVYKGELKDGTEVGVK--RMEL-----------GSVTEQ----------GIA 461
++G+G G VYKG LK TEV VK R L + +Q G+
Sbjct: 2 KIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVC 61
Query: 462 QFESEITVLTKGTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG---------------- 505
+ I ++ + G L + + L L ++LD A G
Sbjct: 62 VQKQPIYIVMELVPGGSLLTFLRKKKNRLTVKKLLQMSLDAAAGMEYLESKNCIHRDLAA 121
Query: 506 --------DDMRVADFGLVRLVPENGKHSILTKVAGT----FGYLAPEYIVTGRITAKVD 553
+ ++++DFG+ R E G I T G + APE + GR T++ D
Sbjct: 122 RNCLVGENNVLKISDFGMSR--EEEG--GIYTVSDGLKQIPIKWTAPEALNYGRYTSESD 177
Query: 554 VYSFGMILMDLITG 567
V+S+G++L + +
Sbjct: 178 VWSYGILLWETFSL 191
|
Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions. Length = 251 |
| >gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases | Back alignment and domain information |
|---|
Score = 47.2 bits (113), Expect = 9e-06
Identities = 47/210 (22%), Positives = 77/210 (36%), Gaps = 78/210 (37%)
Query: 420 FSEENRLGRGGVGTVYKGE-LKDGTEVGVKRMEL-------------------------- 452
F ++G+GG G VYK + G EV +K ++L
Sbjct: 2 FEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVK 61
Query: 453 --------------------GSVTE--QGIAQ--FESEITVLTKGTLGRHLFNWEEEGLE 488
GS+ + + Q ES+I + K L +GLE
Sbjct: 62 YYGSYLKKDELWIVMEFCSGGSLKDLLKSTNQTLTESQIAYVCKELL---------KGLE 112
Query: 489 PLEWNTRL-------NIALDVARGDD--MRVADFGL-VRLVPENGKHSILTKVAGTFGYL 538
L N + NI L D +++ DFGL +L ++++ GT ++
Sbjct: 113 YLHSNGIIHRDIKAANILL----TSDGEVKLIDFGLSAQLSDTKARNTM----VGTPYWM 164
Query: 539 APEYIVTGRITAKVDVYSFGMILMDLITGR 568
APE I K D++S G+ ++L G+
Sbjct: 165 APEVINGKPYDYKADIWSLGITAIELAEGK 194
|
Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253 |
| >gnl|CDD|133199 cd05068, PTKc_Frk_like, Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 46.6 bits (111), Expect = 1e-05
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 8/71 (11%)
Query: 502 VARGDDMRVADFGLVRLVPENGKHSILTKVAGT---FGYLAPEYIVTGRITAKVDVYSFG 558
V + +VADFGL R++ E+ I G + APE + R + K DV+SFG
Sbjct: 136 VGENNICKVADFGLARVIKED----IYEAREGAKFPIKWTAPEAALYNRFSIKSDVWSFG 191
Query: 559 MILMDLIT-GR 568
++L +++T GR
Sbjct: 192 ILLTEIVTYGR 202
|
Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Frk, also known as Rak, is specifically expressed in liver, lung, kidney, intestine, mammary glands, and the islets of Langerhans. Rodent homologs were previously referred to as GTK (gastrointestinal tyr kinase), BSK (beta-cell Src-like kinase), or IYK (intestinal tyr kinase). Studies in mice reveal that Frk is not essential for viability. It plays a role in the signaling that leads to cytokine-induced beta-cell death in Type I diabetes. It also regulates beta-cell number during embryogenesis and early in life. Length = 261 |
| >gnl|CDD|173669 cd05578, STKc_Yank1, Catalytic domain of the Protein Serine/Threonine Kinase, Yank1 | Back alignment and domain information |
|---|
Score = 46.9 bits (112), Expect = 1e-05
Identities = 21/73 (28%), Positives = 36/73 (49%), Gaps = 5/73 (6%)
Query: 497 NIALDVARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYS 556
NI LD +G + + DF + V + T +GT GY+APE + + VD +S
Sbjct: 130 NILLD-EQGH-VHITDFNIATKVTPDTL---TTSTSGTPGYMAPEVLCRQGYSVAVDWWS 184
Query: 557 FGMILMDLITGRK 569
G+ + + G++
Sbjct: 185 LGVTAYECLRGKR 197
|
Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. Length = 258 |
| >gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 46.4 bits (111), Expect = 1e-05
Identities = 26/73 (35%), Positives = 39/73 (53%), Gaps = 6/73 (8%)
Query: 497 NIALDVARGDDMRVADFGLVRLVPENGKHSILTK-VAGTFGYLAPEYIVTGRITAKVDVY 555
NI LD A G +++ DFGL + E T GT YLAPE ++ VD +
Sbjct: 123 NILLD-ADGH-IKLTDFGLAK---ELSSEGSRTNTFCGTPEYLAPEVLLGKGYGKAVDWW 177
Query: 556 SFGMILMDLITGR 568
S G++L +++TG+
Sbjct: 178 SLGVLLYEMLTGK 190
|
Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250 |
| >gnl|CDD|143354 cd07849, STKc_ERK1_2_like, Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 46.9 bits (112), Expect = 2e-05
Identities = 21/64 (32%), Positives = 37/64 (57%), Gaps = 2/64 (3%)
Query: 507 DMRVADFGLVRLVPENGKHSI-LTKVAGTFGYLAPEYIVTGR-ITAKVDVYSFGMILMDL 564
D+++ DFGL R+ H+ LT+ T Y APE ++ + T +D++S G IL ++
Sbjct: 144 DLKICDFGLARIADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEM 203
Query: 565 ITGR 568
++ R
Sbjct: 204 LSNR 207
|
Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase kinase from the Raf family. ERK1/2 have numerous substrates, many of which are nuclear and participate in transcriptional regulation of many cellular processes. They regulate cell growth, cell proliferation, and cell cycle progression from G1 to S phase. Although the distinct roles of ERK1 and ERK2 have not been fully determined, it is known that ERK2 can maintain most functions in the absence of ERK1, and that the deletion of ERK2 is embryonically lethal. The MAPK, Fus3, regulates yeast mating processes including mating-specific gene expression, G1 arrest, mating projection, and cell fusion. Length = 336 |
| >gnl|CDD|133172 cd05040, PTKc_Ack_like, Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase | Back alignment and domain information |
|---|
Score = 46.2 bits (110), Expect = 2e-05
Identities = 23/68 (33%), Positives = 39/68 (57%), Gaps = 5/68 (7%)
Query: 502 VARGDDMRVADFGLVRLVPENGKHSILT---KVAGTFGYLAPEYIVTGRITAKVDVYSFG 558
+A D +++ DFGL+R +P+N H ++ KV F + APE + T + DV+ FG
Sbjct: 130 LASDDKVKIGDFGLMRALPQNEDHYVMEEHLKVP--FAWCAPESLRTRTFSHASDVWMFG 187
Query: 559 MILMDLIT 566
+ L ++ T
Sbjct: 188 VTLWEMFT 195
|
Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with androgen-independent prostate cancer progression. Tnk1 regulates TNFalpha signaling and may play an important role in cell death. Length = 257 |
| >gnl|CDD|133204 cd05073, PTKc_Hck, Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase | Back alignment and domain information |
|---|
Score = 45.8 bits (108), Expect = 3e-05
Identities = 26/73 (35%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
Query: 509 RVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGR 568
++ADFGL R++ +N +++ + APE I G T K DV+SFG++LM+++T
Sbjct: 142 KIADFGLARVIEDN-EYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYG 200
Query: 569 KVVDATHSDPEYI 581
++ S+PE I
Sbjct: 201 RIPYPGMSNPEVI 213
|
Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Hck is present in myeloid and lymphoid cells that play a role in the development of cancer. It may be important in the oncogenic signaling of the protein Tel-Abl, which induces a chronic myelogenous leukemia (CML)-like disease. Hck also acts as a negative regulator of granulocyte colony-stimulating factor (G-CSF)-induced proliferation of granulocytic precursors, suggesting a possible role in the development of acute myeloid leukemia (AML). In addition, Hck is essential in regulating the degranulation of polymorphonuclear leukocytes (PMNs). Genetic polymorphisms affect the expression level of Hck, which affects PMN mediator release and influences the development of chronic obstructive pulmonary disease (COPD). Length = 260 |
| >gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase | Back alignment and domain information |
|---|
Score = 45.2 bits (108), Expect = 4e-05
Identities = 39/203 (19%), Positives = 79/203 (38%), Gaps = 56/203 (27%)
Query: 426 LGRGGVGTVYKGE-LKDGTEVGVKRMELGSVTEQGIAQFESEITVLTK------------ 472
+G+G G VY DG +K ++L +++E+ +E+ +L K
Sbjct: 8 IGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYES 67
Query: 473 ----------------GTLGRHLFNWEEEGL-----EPLEWNTRLNIALD---------- 501
G L + + ++EG + L+W +L +AL
Sbjct: 68 FEEKGKLCIVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRKILHR 127
Query: 502 --------VARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGR-ITAKV 552
+ +++ DFG+ +++ + + V GT YL+PE + + K
Sbjct: 128 DIKPQNIFLTSNGLVKLGDFGISKVL--SSTVDLAKTVVGTPYYLSPE-LCQNKPYNYKS 184
Query: 553 DVYSFGMILMDLITGRKVVDATH 575
D++S G +L +L T + + +
Sbjct: 185 DIWSLGCVLYELCTLKHPFEGEN 207
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258 |
| >gnl|CDD|227223 COG4886, COG4886, Leucine-rich repeat (LRR) protein [Function unknown] | Back alignment and domain information |
|---|
Score = 46.1 bits (109), Expect = 4e-05
Identities = 41/163 (25%), Positives = 68/163 (41%), Gaps = 16/163 (9%)
Query: 89 SHVICSDDGQVTNIELQDQNRKGTVPPILKKLSSMAVMYLENNQLR--GPIPSLVGSLEF 146
+I + ++L D N+ ++P L+ L ++ + L N L + S + +L
Sbjct: 132 PPLIGLLKSNLKELDLSD-NKIESLPSPLRNLPNLKNLDLSFNDLSDLPKLLSNLSNLNN 190
Query: 147 FSAYEANISGTIPDFIGTDTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSL 206
IS +P I + L LDL NN++ + S +SNL L L L
Sbjct: 191 LDLSGNKIS-DLPPEIELLS--ALEELDLSNNSIIELLSS--------LSNLKNLSGLEL 239
Query: 207 GHNKLTGIFPVSSFNNHPKLTTLNLTNNLLQGPTPRFNNSKLT 249
+NKL S N L TL+L+NN + + + + L
Sbjct: 240 SNNKLE--DLPESIGNLSNLETLDLSNNQISSISSLGSLTNLR 280
|
Length = 394 |
| >gnl|CDD|234389 TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclase fusion protein | Back alignment and domain information |
|---|
Score = 46.0 bits (109), Expect = 6e-05
Identities = 26/83 (31%), Positives = 42/83 (50%), Gaps = 10/83 (12%)
Query: 497 NIALDVARGD-DMRVADFGLVRLVPENGKHSIL-------TKVAGTFGYLAPEYIVTGRI 548
NI + +V DFG+ L+P G T+V GT Y APE + +
Sbjct: 109 NIMVSQTGVRPHAKVLDFGIGTLLP--GVRDADVATLTRTTEVLGTPTYCAPEQLRGEPV 166
Query: 549 TAKVDVYSFGMILMDLITGRKVV 571
T D+Y++G+I ++ +TG++VV
Sbjct: 167 TPNSDLYAWGLIFLECLTGQRVV 189
|
This model represents proteins of 1350 in length, in multiple species of Burkholderia, in Acidovorax avenae subsp. citrulli AAC00-1 and Delftia acidovorans SPH-1, and in multiple copies in Sorangium cellulosum, in genomic neighborhoods that include a cyclodehydratase/docking scaffold fusion protein (TIGR03882) and a member of the thiazole/oxazole modified metabolite (TOMM) precursor family TIGR03795. It has a kinase domain in the N-terminal 300 amino acids, followed by a cyclase homology domain, followed by regions without named domain definitions. It is a probable bacteriocin-like metabolite biosynthesis protein [Cellular processes, Toxin production and resistance]. Length = 1266 |
| >gnl|CDD|173747 cd07852, STKc_MAPK15, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15 | Back alignment and domain information |
|---|
Score = 44.9 bits (107), Expect = 8e-05
Identities = 24/65 (36%), Positives = 40/65 (61%), Gaps = 4/65 (6%)
Query: 508 MRVADFGLVRLV---PENGKHSILTKVAGTFGYLAPEYIV-TGRITAKVDVYSFGMILMD 563
+++ADFGL R + EN ++ +LT T Y APE ++ + R T VD++S G IL +
Sbjct: 146 VKLADFGLARSLSELEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGE 205
Query: 564 LITGR 568
++ G+
Sbjct: 206 MLLGK 210
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimuli whereas ERK8 shows low basal activity and is activated by DNA-damaging agents. ERK7 and ERK8 also have different substrate profiles. Genome analysis shows that they are orthologs with similar gene structures. ERK7 and ERK 8 may be involved in the signaling of some nuclear receptor transcription factors. ERK7 regulates hormone-dependent degradation of estrogen receptor alpha while ERK8 down-regulates the transcriptional co-activation androgen and glucocorticoid receptors. Length = 337 |
| >gnl|CDD|173641 cd05072, PTKc_Lyn, Catalytic domain of the Protein Tyrosine Kinase, Lyn | Back alignment and domain information |
|---|
Score = 44.2 bits (104), Expect = 8e-05
Identities = 47/192 (24%), Positives = 85/192 (44%), Gaps = 47/192 (24%)
Query: 425 RLGRGGVGTVYKGELKDGTEVGVKRMELGSVTEQG---------------------IAQF 463
+LG G G V+ G + T+V VK ++ G+++ Q +
Sbjct: 13 KLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTK 72
Query: 464 ESEITVLT----KGTL---------GR----HLFNWEEEGLEPLEWNTRLNI------AL 500
E I ++T KG+L G+ L ++ + E + + R N A
Sbjct: 73 EEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAA 132
Query: 501 DVARGDDM--RVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFG 558
+V + + ++ADFGL R++ E+ +++ + APE I G T K DV+SFG
Sbjct: 133 NVLVSESLMCKIADFGLARVI-EDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFG 191
Query: 559 MILMDLITGRKV 570
++L +++T K+
Sbjct: 192 ILLYEIVTYGKI 203
|
Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lyn is expressed in B lymphocytes and myeloid cells. It exhibits both positive and negative regulatory roles in B cell receptor (BCR) signaling. Lyn, as well as Fyn and Blk, promotes B cell activation by phosphorylating ITAMs (immunoreceptor tyr activation motifs) in CD19 and in Ig components of BCR. It negatively regulates signaling by its unique ability to phosphorylate ITIMs (immunoreceptor tyr inhibition motifs) in cell surface receptors like CD22 and CD5. Lyn also plays an important role in G-CSF receptor signaling by phosphorylating a variety of adaptor molecules. Length = 261 |
| >gnl|CDD|173668 cd05577, STKc_GRK, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase | Back alignment and domain information |
|---|
Score = 44.4 bits (105), Expect = 8e-05
Identities = 47/194 (24%), Positives = 76/194 (39%), Gaps = 54/194 (27%)
Query: 426 LGRGGVGTVYKGELKD-GTEVGVKRM----------ELGSVTEQGIAQ------------ 462
LG+GG G V ++K G K++ E ++ E+ I +
Sbjct: 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAY 60
Query: 463 -FESE------ITVLTKGTLGRHLFNWEEEGL-EP------------LEWNTRLNIAL-- 500
FE++ +T++ G L H++N E G E LE + I
Sbjct: 61 AFETKDDLCLVMTLMNGGDLKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRRIVYRD 120
Query: 501 ----DVARGDD--MRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDV 554
+V D +R++D GL + K + AGT GY+APE + VD
Sbjct: 121 LKPENVLLDDHGNVRISDLGLAVELKGGKK---IKGRAGTPGYMAPEVLQGEVYDFSVDW 177
Query: 555 YSFGMILMDLITGR 568
++ G L ++I GR
Sbjct: 178 FALGCTLYEMIAGR 191
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of G protein signaling) homology (RH) domain and several motifs. The C-terminus diverges among different groups of GRKs. There are seven types of GRKs, named GRK1 to GRK7. They are subdivided into three main groups: visual (GRK1/7); beta-adrenergic receptor kinases (GRK2/3); and GRK4-like (GRK4/5/6). Expression of GRK2/3/5/6 is widespread while GRK1/4/7 show a limited tissue distribution. The substrate spectrum of the widely expressed GRKs partially overlaps. GRKs play important roles in the cardiovascular, immune, respiratory, skeletal, and nervous systems. Length = 277 |
| >gnl|CDD|173721 cd05632, STKc_GRK5, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5 | Back alignment and domain information |
|---|
Score = 44.6 bits (105), Expect = 9e-05
Identities = 39/127 (30%), Positives = 59/127 (46%), Gaps = 32/127 (25%)
Query: 467 ITVLTKGTLGRHLFN-----WEEE-----------GLEPLEWNTRL-------NIALDVA 503
+T++ G L H++N +EEE GLE L + NI LD
Sbjct: 79 LTIMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRENTVYRDLKPENILLD-- 136
Query: 504 RGDD--MRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMIL 561
D +R++D GL +PE SI +V GT GY+APE + R T D + G ++
Sbjct: 137 --DYGHIRISDLGLAVKIPEG--ESIRGRV-GTVGYMAPEVLNNQRYTLSPDYWGLGCLI 191
Query: 562 MDLITGR 568
++I G+
Sbjct: 192 YEMIEGQ 198
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with the membrane though an N-terminal PIP2 binding domain and also binds phospholipids via its C-terminus. GRK5 deficiency is associated with early Alzheimer's disease in humans and mouse models. GRK5 also plays a crucial role in the pathogenesis of sporadic Parkinson's disease. It participates in the regulation and desensitization of PDGFRbeta, a receptor tyrosine kinase involved in a variety of downstream cellular effects including cell growth, chemotaxis, apoptosis, and angiogenesis. GRK5 also regulates Toll-like receptor 4, which is involved in innate and adaptive immunity. Length = 285 |
| >gnl|CDD|173637 cd05059, PTKc_Tec_like, Catalytic domain of Tec-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 44.0 bits (104), Expect = 1e-04
Identities = 50/217 (23%), Positives = 88/217 (40%), Gaps = 62/217 (28%)
Query: 426 LGRGGVGTVYKGELKDGTEVGVKRMELGSVTEQGIAQFESEITVLTK----------GTL 475
LG G G V+ G+ + +V +K + G+++E F E V+ K G
Sbjct: 12 LGSGQFGVVHLGKWRGKIDVAIKMIREGAMSED---DFIEEAKVMMKLSHPNLVQLYGVC 68
Query: 476 GRH--------------LFNW--EEEGLEPLEWNTRLNIALDV----------------- 502
+ L N+ E +G EW L++ DV
Sbjct: 69 TKQRPIFIVTEYMANGCLLNYLRERKGKLGTEW--LLDMCSDVCEAMEYLESNGFIHRDL 126
Query: 503 -AR----GDD--MRVADFGLVRLVPENGKHSILTKVAGT---FGYLAPEYIVTGRITAKV 552
AR G+D ++V+DFGL R V ++ T GT + PE R ++K
Sbjct: 127 AARNCLVGEDNVVKVSDFGLARYVLDDQ----YTSSQGTKFPVKWAPPEVFDYSRFSSKS 182
Query: 553 DVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQ 589
DV+SFG+++ ++ + K+ S+ E + ++ ++
Sbjct: 183 DVWSFGVLMWEVFSEGKMPYERFSNSEVVESVSAGYR 219
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, some members contain the Tec homology (TH) domain, which contains proline-rich and zinc-binding regions. Tec kinases form the second largest subfamily of nRTKs and are expressed mainly by haematopoietic cells, although Tec and Bmx are also found in endothelial cells. B-cells express Btk and Tec, while T-cells express Itk, Txk, and Tec. Collectively, Tec kinases are expressed in a variety of myeloid cells such as mast cells, platelets, macrophages, and dendritic cells. Each Tec kinase shows a distinct cell-type pattern of expression. The function of Tec kinases in lymphoid cells have been studied extensively. They play important roles in the development, differentiation, maturation, regulation, survival, and function of B-cells and T-cells. Mutations in Btk cause the severe B-cell immunodeficiency, X-linked agammaglobulinaemia (XLA). Length = 256 |
| >gnl|CDD|173719 cd05630, STKc_GRK6, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6 | Back alignment and domain information |
|---|
Score = 43.9 bits (103), Expect = 2e-04
Identities = 28/74 (37%), Positives = 41/74 (55%), Gaps = 9/74 (12%)
Query: 497 NIALDVARGDD--MRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDV 554
NI LD D +R++D GL VPE +I +V GT GY+APE + R T D
Sbjct: 132 NILLD----DHGHIRISDLGLAVHVPEG--QTIKGRV-GTVGYMAPEVVKNERYTFSPDW 184
Query: 555 YSFGMILMDLITGR 568
++ G +L ++I G+
Sbjct: 185 WALGCLLYEMIAGQ 198
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK6 plays important roles in the regulation of dopamine, M3 muscarinic, opioid, and chemokine receptor signaling. It also plays maladaptive roles in addiction and Parkinson's disease. GRK6-deficient mice exhibit altered dopamine receptor regulation, decreased lymphocyte chemotaxis, and increased acute inflammation and neutrophil chemotaxis. Length = 285 |
| >gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 43.0 bits (102), Expect = 2e-04
Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Query: 419 NFSEENRLGRGGVGTVYKGE-LKDGTEVGVKRMELGSVTEQGIAQFESEITVLTK 472
N+ + +GRG G VYKG L+ G V +K++ L + E+ + EI +L
Sbjct: 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKN 55
|
Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254 |
| >gnl|CDD|143363 cd07858, STKc_TEY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Score = 43.5 bits (103), Expect = 2e-04
Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 4/64 (6%)
Query: 507 DMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVT-GRITAKVDVYSFGMILMDLI 565
D+++ DFGL R + K +T+ T Y APE ++ T +DV+S G I +L+
Sbjct: 146 DLKICDFGLAR--TTSEKGDFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELL 203
Query: 566 TGRK 569
GRK
Sbjct: 204 -GRK 206
|
Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. This subfamily represents the TEY subtype and is further subdivided into three groups (A, B, and C). Group A is represented by AtMPK3, AtMPK6, Nicotiana tabacum BTF4 (NtNTF4), among others. They are mostly involved in environmental and hormonal responses. AtMPK3 and AtMPK6 are also key regulators for stomatal development and patterning. Group B is represented by AtMPK4, AtMPK13, and NtNTF6, among others. They may be involved in both cell division and environmental stress response. AtMPK4 also participates in regulating innate immunity. Group C is represented by AtMPK1, AtMPK2, NtNTF3, Oryza sativa MAPK4 (OsMAPK4), among others. They may also be involved in stress responses. AtMPK1 and AtMPK2 are activated following mechanical injury and in the presence of stress chemicals such as jasmonic acid, hydrogen peroxide and abscisic acid. OsMAPK4 is also called OsMSRMK3 for Multiple Stress-Responsive MAPK3. Length = 337 |
| >gnl|CDD|173631 cd05045, PTKc_RET, Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein | Back alignment and domain information |
|---|
Score = 43.4 bits (102), Expect = 2e-04
Identities = 22/65 (33%), Positives = 37/65 (56%)
Query: 502 VARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMIL 561
VA G M+++DFGL R V E + +K ++A E + T + DV+SFG++L
Sbjct: 160 VAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLL 219
Query: 562 MDLIT 566
+++T
Sbjct: 220 WEIVT 224
|
Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leading to autophosphorylation, activation, and intracellular signaling. RET is essential for the development of the sympathetic, parasympathetic and enteric nervous systems, and the kidney. RET disruption by germline mutations causes diseases in humans including congenital aganglionosis of the gastrointestinal tract (Hirschsprung's disease) and three related inherited cancers: multiple endocrine neoplasia type 2A (MEN2A), MEN2B, and familial medullary thyroid carcinoma (FMTC). Length = 290 |
| >gnl|CDD|133179 cd05048, PTKc_Ror, Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors | Back alignment and domain information |
|---|
Score = 43.2 bits (102), Expect = 2e-04
Identities = 49/227 (21%), Positives = 84/227 (37%), Gaps = 79/227 (34%)
Query: 408 IPIQVLRNATNNFSEENRLGRGGVGTVYKGEL------KDGTEVGVKRM-ELGSVTEQGI 460
IP+ +R F EE LG G G VYKGEL T V +K + E Q
Sbjct: 2 IPLSAVR-----FLEE--LGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQ-- 52
Query: 461 AQFESEITVLTK----------------------------GTLGRHLF-----------N 481
+F E +++ G L L +
Sbjct: 53 QEFRQEAELMSDLQHPNIVCLLGVCTKEQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAES 112
Query: 482 WEEEGLEPLEWNTRLNIALDVARGDD------------------------MRVADFGLVR 517
+E L+ + L+IA+ +A G + ++++DFGL R
Sbjct: 113 GDETVKSSLDCSDFLHIAIQIAAGMEYLSSHHFVHRDLAARNCLVGEGLTVKISDFGLSR 172
Query: 518 LVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDL 564
+ + + +K ++ PE I+ G+ T + D++SFG++L ++
Sbjct: 173 DIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEI 219
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. They play important roles in bone and heart formation. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Drosophila Ror is expressed only in the developing nervous system during neurite outgrowth and neuronal differentiation, suggesting a role for Drosophila Ror in neural development. More recently, mouse Ror1 and Ror2 have also been found to play an important role in regulating neurite growth in central neurons. Ror1 and Ror2 are believed to have some overlapping and redundant functions. Length = 283 |
| >gnl|CDD|133189 cd05058, PTKc_Met_Ron, Catalytic domain of the Protein Tyrosine Kinases, Met and Ron | Back alignment and domain information |
|---|
Score = 42.8 bits (101), Expect = 3e-04
Identities = 21/61 (34%), Positives = 36/61 (59%), Gaps = 2/61 (3%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGTF--GYLAPEYIVTGRITAKVDVYSFGMILMDLI 565
++VADFGL R + + +S+ ++A E + T + T K DV+SFG++L +L+
Sbjct: 137 VKVADFGLARDIYDKEYYSVHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELM 196
Query: 566 T 566
T
Sbjct: 197 T 197
|
Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also called the HGF receptor. HGF/Met signaling plays a role in growth, transformation, cell motility, invasion, metastasis, angiogenesis, wound healing, and tissue regeneration. Aberrant expression of Met through mutations or gene amplification is associated with many human cancers including hereditary papillary renal and gastric carcinomas. The ligand for Ron is macrophage stimulating protein (MSP). Ron signaling is important in regulating cell motility, adhesion, proliferation, and apoptosis. Aberrant Ron expression is implicated in tumorigenesis and metastasis. Length = 262 |
| >gnl|CDD|173696 cd05605, STKc_GRK4_like, Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 42.5 bits (100), Expect = 4e-04
Identities = 37/125 (29%), Positives = 59/125 (47%), Gaps = 28/125 (22%)
Query: 467 ITVLTKGTLGRHLFN-----WEEE-----------GLEPLEWNTRL-------NIALDVA 503
+T++ G L H++N ++EE GLE L + NI LD
Sbjct: 79 LTLMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRERIVYRDLKPENILLD-D 137
Query: 504 RGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMD 563
G +R++D GL +PE +I +V GT GY+APE + R T D + G ++ +
Sbjct: 138 YGH-IRISDLGLAVEIPEG--ETIRGRV-GTVGYMAPEVVKNERYTFSPDWWGLGCLIYE 193
Query: 564 LITGR 568
+I G+
Sbjct: 194 MIEGK 198
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, GRK6, and similar GRKs. GRKs in this group contain an N-terminal RGS homology (RH) domain and a catalytic domain, but lack a G protein betagamma-subunit binding domain. They are localized to the plasma membrane through post-translational lipid modification or direct binding to PIP2. Length = 285 |
| >gnl|CDD|143356 cd07851, STKc_p38, Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Score = 42.7 bits (101), Expect = 4e-04
Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 10/74 (13%)
Query: 497 NIALDVARGD-DMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVT-GRITAKVDV 554
NIA++ D ++++ DFGL R +T T Y APE ++ VD+
Sbjct: 148 NIAVN---EDCELKILDFGLARH-----TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDI 199
Query: 555 YSFGMILMDLITGR 568
+S G I+ +L+TG+
Sbjct: 200 WSVGCIMAELLTGK 213
|
Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. p38 substrates include other protein kinases and factors that regulate transcription, nuclear export, mRNA stability and translation. p38 kinases are drug targets for the inflammatory diseases psoriasis, rheumatoid arthritis, and chronic pulmonary disease. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta, which show varying substrate specificity and expression patterns. p38alpha and p38beta are ubiquitously expressed, p38gamma is predominantly found in skeletal muscle, and p38delta is found in the heart, lung, testis, pancreas, and small intestine. Length = 343 |
| >gnl|CDD|173771 cd08529, STKc_FA2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains | Back alignment and domain information |
|---|
Score = 42.1 bits (99), Expect = 4e-04
Identities = 24/79 (30%), Positives = 42/79 (53%), Gaps = 6/79 (7%)
Query: 496 LNIALDVARGDDMRVADFGLVRLVPENGKHSILTK-VAGTFGYLAPEYIVTGRITAKVDV 554
LN+ LD D++++ D G+ +L+ +N + + GT YL+PE K DV
Sbjct: 130 LNLFLD--AYDNVKIGDLGVAKLLSDN---TNFANTIVGTPYYLSPELCEDKPYNEKSDV 184
Query: 555 YSFGMILMDLITGRKVVDA 573
++ G++L + TG+ DA
Sbjct: 185 WALGVVLYECCTGKHPFDA 203
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cycle progression. No cellular function has yet been ascribed to CNK4. Length = 256 |
| >gnl|CDD|173726 cd06610, STKc_OSR1_SPAK, Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase | Back alignment and domain information |
|---|
Score = 42.0 bits (99), Expect = 5e-04
Identities = 33/116 (28%), Positives = 53/116 (45%), Gaps = 23/116 (19%)
Query: 464 ESEITVLTKGTLGRHLFNWEEEGLEPLEWNTRL-------NIALDVARGDDMRVADFGLV 516
E+ I + K L +GLE L N ++ NI L G +++ADFG+
Sbjct: 101 EAIIATVLKEVL---------KGLEYLHSNGQIHRDIKAGNILLG-EDGS-VKIADFGVS 149
Query: 517 RLVPENG--KHSILTKVAGTFGYLAPEYI--VTGRITAKVDVYSFGMILMDLITGR 568
+ + G + GT ++APE + V G K D++SFG+ ++L TG
Sbjct: 150 ASLADGGDRTRKVRKTFVGTPCWMAPEVMEQVHG-YDFKADIWSFGITAIELATGA 204
|
Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 and SPAK contain a conserved C-terminal (CCT) domain, which recognizes a unique motif ([RK]FX[VI]) present in their activating kinases (WNK1/WNK4) and their substrates. Length = 267 |
| >gnl|CDD|133243 cd05112, PTKc_Itk, Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase | Back alignment and domain information |
|---|
Score = 41.9 bits (98), Expect = 5e-04
Identities = 41/212 (19%), Positives = 82/212 (38%), Gaps = 52/212 (24%)
Query: 426 LGRGGVGTVYKGELKDGTEVGVKRMELGSVTEQGIAQFESEITVLTKGTLGRHL------ 479
+G G G V+ G + +V +K + G+++E+ F E V+ K + + +
Sbjct: 12 IGSGQFGLVWLGYWLEKRKVAIKTIREGAMSEE---DFIEEAQVMMKLSHPKLVQLYGVC 68
Query: 480 ---------FNWEEEGL---------EPLEWNTRLNIALDVARG---------------- 505
F + E G T L + LDV G
Sbjct: 69 TERSPICLVFEFMEHGCLSDYLRAQRGKFSQETLLGMCLDVCEGMAYLESSNVIHRDLAA 128
Query: 506 --------DDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSF 557
++V+DFG+ R V ++ +++ T + +PE + ++K DV+SF
Sbjct: 129 RNCLVGENQVVKVSDFGMTRFVLDD-QYTSSTGTKFPVKWSSPEVFSFSKYSSKSDVWSF 187
Query: 558 GMILMDLITGRKVVDATHSDPEYIIHLATWFQ 589
G+++ ++ + K S+ E + + F+
Sbjct: 188 GVLMWEVFSEGKTPYENRSNSEVVETINAGFR 219
|
Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Itk contains the Tec homology (TH) domain containing one proline-rich region and a zinc-binding region. Tec kinases are expressed mainly by haematopoietic cells. Itk is expressed in T-cells and mast cells, and is important in their development and differentiation. Of the three Tec kinases expressed in T-cells, Itk plays the predominant role in T-cell receptor (TCR) signaling. It is activated by phosphorylation upon TCR crosslinking and is involved in the pathway resulting in phospholipase C-gamma1 activation and actin polymerization. It also plays a role in the downstream signaling of the T-cell costimulatory receptor CD28, the T-cell surface receptor CD2, and the chemokine receptor CXCR4. In addition, Itk is crucial for the development of T-helper(Th)2 effector responses. Length = 256 |
| >gnl|CDD|173636 cd05057, PTKc_EGFR_like, Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 42.0 bits (99), Expect = 5e-04
Identities = 32/112 (28%), Positives = 54/112 (48%), Gaps = 18/112 (16%)
Query: 472 KGTLG-RHLFNWEEE---GLEPLEWNTRL---NIALDVARG------DDMRVADFGLVRL 518
K +G ++L NW + G+ LE RL ++A AR +++ DFGL +L
Sbjct: 103 KDNIGSQYLLNWCVQIAKGMSYLE-EKRLVHRDLA---ARNVLVKTPQHVKITDFGLAKL 158
Query: 519 VPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT-GRK 569
+ + K ++A E I+ T K DV+S+G+ + +L+T G K
Sbjct: 159 LDVDEKEYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAK 210
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, resulting in the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Collectively, they can recognize a variety of ligands including EGF, TGFalpha, and neuregulins, among others. All four subfamily members can form homo- or heterodimers. HER3 contains an impaired kinase domain and depends on its heterodimerization partner for activation. EGFR subfamily members are involved in signaling pathways leading to a broad range of cellular responses including cell proliferation, differentiation, migration, growth inhibition, and apoptosis. Gain of function alterations, through their overexpression, deletions, or point mutations in their kinase domains, have been implicated in various cancers. These receptors are targets of many small molecule inhibitors and monoclonal antibodies used in cancer therapy. Length = 279 |
| >gnl|CDD|132951 cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Score = 42.1 bits (99), Expect = 6e-04
Identities = 17/43 (39%), Positives = 26/43 (60%)
Query: 526 SILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGR 568
SI GT Y++PE I G+ T K DV+S G+ +++L G+
Sbjct: 157 SIADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGK 199
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Byr1 from Schizosaccharomyces pombe, FUZ7 from Ustilago maydis, and related proteins. Byr1 phosphorylates its downstream target, the MAPK Spk1, and is regulated by the MAPKKK Byr2. The Spk1 cascade is pheromone-responsive and is essential for sporulation and sexual differentiation in fission yeast. FUZ7 phosphorylates and activates its target, the MAPK Crk1, which is required in mating and virulence in U. maydis. Length = 284 |
| >gnl|CDD|173723 cd06605, PKc_MAPKK, Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase | Back alignment and domain information |
|---|
Score = 41.5 bits (98), Expect = 6e-04
Identities = 29/89 (32%), Positives = 48/89 (53%), Gaps = 8/89 (8%)
Query: 497 NIALDVARGDDMRVADFGLV-RLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVY 555
NI ++ +RG +++ DFG+ +LV +S+ GT Y+APE I + K D++
Sbjct: 131 NILVN-SRGQ-IKLCDFGVSGQLV-----NSLAKTFVGTSSYMAPERIQGNDYSVKSDIW 183
Query: 556 SFGMILMDLITGRKVVDATHSDPEYIIHL 584
S G+ L++L TGR + P+ I L
Sbjct: 184 SLGLSLIELATGRFPYPPENDPPDGIFEL 212
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity PKs that phosphorylate their downstream targets, MAPKs, at specific threonine and tyrosine residues. There are three MAPK subfamilies: extracellular signal-regulated kinase (ERK), c-Jun N-terminal kinase (JNK), and p38. In mammalian cells, there are seven MAPKKs (named MKK1-7) and 20 MAPKKKs. Each MAPK subfamily can be activated by at least two cognate MAPKKs and by multiple MAPKKKs. Length = 265 |
| >gnl|CDD|206026 pfam13855, LRR_8, Leucine rich repeat | Back alignment and domain information |
|---|
Score = 37.9 bits (89), Expect = 7e-04
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Query: 201 LEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNNLLQ 237
L+ L L +N+LT I P +F P L L+L+ N L
Sbjct: 2 LKSLDLSNNRLTVI-PDGAFKGLPNLKVLDLSGNNLT 37
|
Length = 60 |
| >gnl|CDD|227223 COG4886, COG4886, Leucine-rich repeat (LRR) protein [Function unknown] | Back alignment and domain information |
|---|
Score = 42.3 bits (99), Expect = 7e-04
Identities = 29/119 (24%), Positives = 48/119 (40%), Gaps = 13/119 (10%)
Query: 158 IPDFIGTDTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPV 217
IP I L LDL +N ++ ++PS + NL L++L L N L+ + +
Sbjct: 131 IPPLI-GLLKSNLKELDLSDNKIE-SLPS-------PLRNLPNLKNLDLSFNDLSDLPKL 181
Query: 218 SSFNNHPKLTTLNLTNNLLQG-PTPRFNNSKLTVDMRTGSNCFCLDDPGLACDSRVNIL 275
S N L L+L+ N + P S L + +N L+ ++ L
Sbjct: 182 LS--NLSNLNNLDLSGNKISDLPPEIELLSALEE-LDLSNNSIIELLSSLSNLKNLSGL 237
|
Length = 394 |
| >gnl|CDD|205079 pfam12799, LRR_4, Leucine Rich repeats (2 copies) | Back alignment and domain information |
|---|
Score = 37.1 bits (87), Expect = 8e-04
Identities = 14/41 (34%), Positives = 23/41 (56%), Gaps = 3/41 (7%)
Query: 201 LEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNNLLQGPTP 241
LE L L +N++T + +N P L TL+L+ N + +P
Sbjct: 3 LETLDLSNNQITDL---PPLSNLPNLETLDLSGNKITDLSP 40
|
Leucine rich repeats are short sequence motifs present in a number of proteins with diverse functions and cellular locations. These repeats are usually involved in protein-protein interactions. Each Leucine Rich Repeat is composed of a beta-alpha unit. These units form elongated non-globular structures. Leucine Rich Repeats are often flanked by cysteine rich domains. Length = 43 |
| >gnl|CDD|173770 cd08528, STKc_Nek10, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10 | Back alignment and domain information |
|---|
Score = 41.3 bits (97), Expect = 8e-04
Identities = 27/72 (37%), Positives = 34/72 (47%), Gaps = 9/72 (12%)
Query: 497 NIALDVARGDDMRV--ADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDV 554
NI L G+D +V DFGL + K LT V GT Y PE + K DV
Sbjct: 144 NIML----GEDDKVTITDFGLAKQKQPESK---LTSVVGTILYSCPEIVKNEPYGEKADV 196
Query: 555 YSFGMILMDLIT 566
++FG IL + T
Sbjct: 197 WAFGCILYQMCT 208
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. Length = 269 |
| >gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1 | Back alignment and domain information |
|---|
Score = 41.4 bits (98), Expect = 9e-04
Identities = 21/92 (22%), Positives = 35/92 (38%), Gaps = 24/92 (26%)
Query: 497 NIALDVARGDDMRV--ADFGLVRLVPENGKHSILTKVA------------------GTFG 536
NI LD DM + DFG +++ N A GT
Sbjct: 132 NILLD----KDMHIKITDFGTAKVLDPNSSPESNKGDATNIDSQIEKNRRRFASFVGTAE 187
Query: 537 YLAPEYIVTGRITAKVDVYSFGMILMDLITGR 568
Y++PE + D+++ G I+ ++TG+
Sbjct: 188 YVSPELLNEKPAGKSSDLWALGCIIYQMLTGK 219
|
Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280 |
| >gnl|CDD|143333 cd05118, STKc_CMGC, Catalytic domain of CMGC family Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 41.2 bits (97), Expect = 0.001
Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 3/64 (4%)
Query: 506 DDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRI-TAKVDVYSFGMILMDL 564
+++ADFGL R T T Y APE ++ + + VD++S G I +L
Sbjct: 135 GVLKLADFGLARSF--GSPVRPYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAEL 192
Query: 565 ITGR 568
++ R
Sbjct: 193 LSRR 196
|
Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Length = 283 |
| >gnl|CDD|173741 cd07843, STKc_CDC2L1, Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1 | Back alignment and domain information |
|---|
Score = 41.1 bits (97), Expect = 0.001
Identities = 18/61 (29%), Positives = 31/61 (50%), Gaps = 3/61 (4%)
Query: 509 RVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIV-TGRITAKVDVYSFGMILMDLITG 567
++ DFGL R K T++ T Y APE ++ + +D++S G I +L+T
Sbjct: 146 KICDFGLAREYGSPLKP--YTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTK 203
Query: 568 R 568
+
Sbjct: 204 K 204
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the major isoform, associates with cyclin L and is expressed throughout the cell cycle. It is involved in RNA processing and the regulation of transcription. CDK11(p58) associates with cyclin D3 and is expressed during the G2/M phase of the cell cycle. It plays roles in spindle morphogenesis, centrosome maturation, sister chromatid cohesion, and the completion of mitosis. CDK11(p46) is formed from the larger isoforms by caspases during TNFalpha- and Fas-induced apoptosis. It functions as a downstream effector kinase in apoptotic signaling pathways and interacts with eukaryotic initiation factor 3f (eIF3f), p21-activated kinase (PAK1), and Ran-binding protein (RanBPM). Length = 293 |
| >gnl|CDD|133171 cd05039, PTKc_Csk_like, Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 40.8 bits (96), Expect = 0.001
Identities = 48/196 (24%), Positives = 80/196 (40%), Gaps = 65/196 (33%)
Query: 426 LGRGGVGTVYKGELKDGTEVGVKRMELGSVTEQGIAQFESEITVLT-------------- 471
+G+G G V G+ + G +V VK ++ S Q F +E +V+T
Sbjct: 14 IGKGEFGDVMLGDYR-GQKVAVKCLKDDSTAAQ---AFLAEASVMTTLRHPNLVQLLGVV 69
Query: 472 --------------KGTL-------GRHLFNWEE---------EGLEPLEWNT---RLNI 498
KG+L GR + + EG+E LE R
Sbjct: 70 LQGNPLYIVTEYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKNFVHRDLA 129
Query: 499 ALDVARGDDM--RVADFGL---VRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVD 553
A +V +D+ +V+DFGL ++GK + + APE + + + K D
Sbjct: 130 ARNVLVSEDLVAKVSDFGLAKEASQGQDSGKLPV--------KWTAPEALREKKFSTKSD 181
Query: 554 VYSFGMILMDLIT-GR 568
V+SFG++L ++ + GR
Sbjct: 182 VWSFGILLWEIYSFGR 197
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As negative regulators of Src kinases, Csk and Chk play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Length = 256 |
| >gnl|CDD|133212 cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Score = 40.5 bits (95), Expect = 0.002
Identities = 29/107 (27%), Positives = 54/107 (50%), Gaps = 13/107 (12%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGT--FGYLAPEYIVTGRITAKVDVYSFGMILMDLI 565
+++ DFGL +++P++ ++ + + + F Y APE + + + DV+SFG++L +L
Sbjct: 147 VKIGDFGLTKVLPQDKEYYKVREPGESPIFWY-APESLTESKFSVASDVWSFGVVLYELF 205
Query: 566 TGRKVVDATHSDPEYIIHLATWFQKMHKNHDTFQMAIDKTIQLDEEN 612
T D + S P F +M N QM + I+L + N
Sbjct: 206 T---YSDKSCSPPAE-------FMRMMGNDKQGQMIVYHLIELLKNN 242
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 284 |
| >gnl|CDD|173720 cd05631, STKc_GRK4, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4 | Back alignment and domain information |
|---|
Score = 40.4 bits (94), Expect = 0.002
Identities = 37/126 (29%), Positives = 62/126 (49%), Gaps = 30/126 (23%)
Query: 467 ITVLTKGTLGRHLFN-----WEEE-----------GLEPLEWNTRL--------NIALDV 502
+T++ G L H++N ++E+ GLE L+ R+ NI LD
Sbjct: 79 LTIMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQ-RERIVYRDLKPENILLD- 136
Query: 503 ARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILM 562
RG +R++D GL +PE ++ +V GT GY+APE I + T D + G ++
Sbjct: 137 DRGH-IRISDLGLAVQIPEG--ETVRGRV-GTVGYMAPEVINNEKYTFSPDWWGLGCLIY 192
Query: 563 DLITGR 568
++I G+
Sbjct: 193 EMIQGQ 198
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found in the testis, but is also present in the cerebellum and kidney. It is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK4 polymorphisms are associated with hypertension and salt sensitivity, as they cause hyperphosphorylation, desensitization, and internalization of the dopamine 1 (D1) receptor while increasing the expression of the angiotensin II type 1 receptor. GRK4 plays a crucial role in the D1 receptor regulation of sodium excretion and blood pressure. Length = 285 |
| >gnl|CDD|173761 cd08221, STKc_Nek9, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9 | Back alignment and domain information |
|---|
Score = 40.1 bits (94), Expect = 0.002
Identities = 23/79 (29%), Positives = 45/79 (56%), Gaps = 4/79 (5%)
Query: 496 LNIALDVARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVY 555
LNI L + +++ DFG+ +++ ++S+ V GT Y++PE + K D++
Sbjct: 130 LNIFL--TKAGLIKLGDFGISKIL--GSEYSMAETVVGTPYYMSPELCQGVKYNFKSDIW 185
Query: 556 SFGMILMDLITGRKVVDAT 574
+ G +L +L+T ++ DAT
Sbjct: 186 ALGCVLYELLTLKRTFDAT 204
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associates with FACT (FAcilitates Chromatin Transcription) and modulates interphase progression. It also interacts with Nek6, and Nek7, during mitosis, resulting in their activation. Length = 256 |
| >gnl|CDD|173656 cd05111, PTK_HER3, Pseudokinase domain of the Protein Tyrosine Kinase, HER3 | Back alignment and domain information |
|---|
Score = 39.9 bits (93), Expect = 0.002
Identities = 16/59 (27%), Positives = 36/59 (61%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT 566
+++ADFG+ L+ + K ++ ++A E I+ GR T + DV+S+G+ + ++++
Sbjct: 148 VQIADFGVADLLYPDDKKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMS 206
|
Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. HER3 binds the neuregulin ligands, NRG1 and NRG2. HER3 contains an impaired tyr kinase domain and relies on its heterodimerization partners for activity following ligand binding. The HER2-HER3 heterodimer constitutes a high affinity co-receptor capable of potent mitogenic signaling. HER3 participates in a signaling pathway involved in the proliferation, survival, adhesion, and motility of tumor cells. Length = 279 |
| >gnl|CDD|173625 cd05032, PTKc_InsR_like, Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 40.0 bits (94), Expect = 0.002
Identities = 21/65 (32%), Positives = 35/65 (53%)
Query: 502 VARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMIL 561
VA +++ DFG+ R + E + K ++APE + G T K DV+SFG++L
Sbjct: 152 VAEDLTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVL 211
Query: 562 MDLIT 566
++ T
Sbjct: 212 WEMAT 216
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR and IGF-1R, which share 84% sequence identity in their kinase domains, display physiologically distinct yet overlapping functions in cell growth, differentiation, and metabolism. InsR activation leads primarily to metabolic effects while IGF-1R activation stimulates mitogenic pathways. In cells expressing both receptors, InsR/IGF-1R hybrids are found together with classical receptors. Both receptors can interact with common adaptor molecules such as IRS-1 and IRS-2. Length = 277 |
| >gnl|CDD|205079 pfam12799, LRR_4, Leucine Rich repeats (2 copies) | Back alignment and domain information |
|---|
Score = 35.5 bits (83), Expect = 0.003
Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 9/52 (17%)
Query: 168 PQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSS 219
L LDL NN + +P +SNL LE L L NK+T + P+S+
Sbjct: 1 TNLETLDLSNNQIT-DLPP--------LSNLPNLETLDLSGNKITDLSPLSN 43
|
Leucine rich repeats are short sequence motifs present in a number of proteins with diverse functions and cellular locations. These repeats are usually involved in protein-protein interactions. Each Leucine Rich Repeat is composed of a beta-alpha unit. These units form elongated non-globular structures. Leucine Rich Repeats are often flanked by cysteine rich domains. Length = 43 |
| >gnl|CDD|173702 cd05611, STKc_Rim15_like, Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 39.8 bits (93), Expect = 0.003
Identities = 20/60 (33%), Positives = 29/60 (48%), Gaps = 6/60 (10%)
Query: 508 MRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITG 567
+++ DFGL R EN K GT YLAPE I+ D +S G ++ + + G
Sbjct: 136 LKLTDFGLSRNGLEN------KKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFG 189
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a downstream effector of PKA and regulates entry into stationary phase (G0). Thus, it plays a crucial role in regulating yeast proliferation, differentiation, and aging. Cek1 may facilitate progression of mitotic anaphase. Length = 260 |
| >gnl|CDD|219766 pfam08263, LRRNT_2, Leucine rich repeat N-terminal domain | Back alignment and domain information |
|---|
Score = 35.8 bits (83), Expect = 0.003
Identities = 11/39 (28%), Positives = 14/39 (35%), Gaps = 5/39 (12%)
Query: 61 DAAVMQDLKASFVIPKRLK---W--SDPDPCQWSHVICS 94
D + K+S W S DPC W+ V C
Sbjct: 4 DRDALLAFKSSLNGDPSGALSSWNPSSSDPCSWTGVTCD 42
|
Leucine Rich Repeats pfam00560 are short sequence motifs present in a number of proteins with diverse functions and cellular locations. Leucine Rich Repeats are often flanked by cysteine rich domains. This domain is often found at the N-terminus of tandem leucine rich repeats. Length = 42 |
| >gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4 | Back alignment and domain information |
|---|
Score = 39.2 bits (92), Expect = 0.003
Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 7/78 (8%)
Query: 497 NIALDVARGDDMRVADFGLVRLVPENGK--HSILTKVAGTFGYLAPEYIVTGRITAK--- 551
NI LD +++ DFG + N + +AGT Y+APE I G+
Sbjct: 129 NIFLD--HNGVIKLGDFGCAVKLKNNTTTMGEEVQSLAGTPAYMAPEVITGGKGKGHGRA 186
Query: 552 VDVYSFGMILMDLITGRK 569
D++S G +++++ TG++
Sbjct: 187 ADIWSLGCVVLEMATGKR 204
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264 |
| >gnl|CDD|132949 cd06618, PKc_MKK7, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7 | Back alignment and domain information |
|---|
Score = 39.7 bits (93), Expect = 0.003
Identities = 29/77 (37%), Positives = 43/77 (55%), Gaps = 11/77 (14%)
Query: 497 NIALDVARGDDMRVADFGLV-RLVPENGKHSILTKVAGTFGYLAPEYI----VTGRITAK 551
NI LD A G+ +++ DFG+ RLV K T+ AG Y+APE I + +
Sbjct: 145 NILLD-ASGN-VKLCDFGISGRLVDSKAK----TRSAGCAAYMAPERIDPPDPNPKYDIR 198
Query: 552 VDVYSFGMILMDLITGR 568
DV+S G+ L++L TG+
Sbjct: 199 ADVWSLGISLVELATGQ 215
|
Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates its downstream target, c-Jun N-terminal kinase (JNK), on specific threonine and tyrosine residues. Although MKK7 is capable of dual phosphorylation, it prefers to phosphorylate the threonine residue of JNK. Thus, optimal activation of JNK requires both MKK4 (not included in this subfamily) and MKK7. MKK7 is primarily activated by cytokines. MKK7 is essential for liver formation during embryogenesis. It plays roles in G2/M cell cycle arrest and cell growth. In addition, it is involved in the control of programmed cell death, which is crucial in oncogenesis, cancer chemoresistance, and antagonism to TNFalpha-induced killing, through its inhibition by Gadd45beta and the subsequent suppression of the JNK cascade. Length = 296 |
| >gnl|CDD|173707 cd05616, STKc_cPKC_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta | Back alignment and domain information |
|---|
Score = 39.6 bits (92), Expect = 0.004
Identities = 26/82 (31%), Positives = 44/82 (53%), Gaps = 6/82 (7%)
Query: 497 NIALDVARGDDMRVADFGLVRLVPENGKHSILTKV-AGTFGYLAPEYIVTGRITAKVDVY 555
N+ LD + G +++ADFG+ + EN + TK GT Y+APE I VD +
Sbjct: 131 NVMLD-SEGH-IKIADFGMCK---ENMWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWW 185
Query: 556 SFGMILMDLITGRKVVDATHSD 577
+FG++L +++ G+ + D
Sbjct: 186 AFGVLLYEMLAGQAPFEGEDED 207
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. The PKC beta isoforms (I and II), generated by alternative splicing of a single gene, are preferentially activated by hyperglycemia-induced DAG in retinal tissues. This is implicated in diabetic microangiopathy such as ischemia, neovascularization, and abnormal vasodilator function. PKC-beta also plays an important role in VEGF signaling. In addition, glucose regulates proliferation in retinal endothelial cells via PKC-betaI. PKC-beta is also being explored as a therapeutic target in cancer. It contributes to tumor formation and is involved in the tumor host mechanisms of inflammation and angiogenesis. Length = 323 |
| >gnl|CDD|173683 cd05592, STKc_nPKC_theta_delta, Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta | Back alignment and domain information |
|---|
Score = 39.4 bits (92), Expect = 0.004
Identities = 23/73 (31%), Positives = 41/73 (56%), Gaps = 6/73 (8%)
Query: 497 NIALDVARGDDMRVADFGLVRL-VPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVY 555
N+ LD + +++ADFG+ + + GK S GT Y+APE + + VD +
Sbjct: 126 NVLLD--KDGHIKIADFGMCKENMNGEGKASTF---CGTPDYIAPEILKGQKYNESVDWW 180
Query: 556 SFGMILMDLITGR 568
SFG++L +++ G+
Sbjct: 181 SFGVLLYEMLIGQ 193
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. Length = 316 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 631 | |||
| PLN00113 | 968 | leucine-rich repeat receptor-like protein kinase; | 100.0 | |
| KOG1187 | 361 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG0192 | 362 | consensus Tyrosine kinase specific for activated ( | 99.94 | |
| KOG0575 | 592 | consensus Polo-like serine/threonine protein kinas | 99.94 | |
| KOG0591 | 375 | consensus NIMA (never in mitosis)-related G2-speci | 99.94 | |
| KOG0581 | 364 | consensus Mitogen-activated protein kinase kinase | 99.94 | |
| KOG0595 | 429 | consensus Serine/threonine-protein kinase involved | 99.93 | |
| KOG0598 | 357 | consensus Ribosomal protein S6 kinase and related | 99.93 | |
| KOG1026 | 774 | consensus Nerve growth factor receptor TRKA and re | 99.93 | |
| KOG0193 | 678 | consensus Serine/threonine protein kinase RAF [Sig | 99.93 | |
| KOG0597 | 808 | consensus Serine-threonine protein kinase FUSED [G | 99.93 | |
| KOG0197 | 468 | consensus Tyrosine kinases [Signal transduction me | 99.91 | |
| KOG0593 | 396 | consensus Predicted protein kinase KKIAMRE [Genera | 99.91 | |
| KOG0196 | 996 | consensus Tyrosine kinase, EPH (ephrin) receptor f | 99.91 | |
| KOG0201 | 467 | consensus Serine/threonine protein kinase [Signal | 99.9 | |
| KOG0694 | 694 | consensus Serine/threonine protein kinase [Signal | 99.9 | |
| KOG0615 | 475 | consensus Serine/threonine protein kinase Chk2 and | 99.9 | |
| PTZ00283 | 496 | serine/threonine protein kinase; Provisional | 99.89 | |
| KOG1095 | 1025 | consensus Protein tyrosine kinase [Signal transduc | 99.89 | |
| KOG0616 | 355 | consensus cAMP-dependent protein kinase catalytic | 99.89 | |
| cd05102 | 338 | PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi | 99.89 | |
| KOG3653 | 534 | consensus Transforming growth factor beta/activin | 99.89 | |
| KOG0578 | 550 | consensus p21-activated serine/threonine protein k | 99.88 | |
| KOG0600 | 560 | consensus Cdc2-related protein kinase [Cell cycle | 99.88 | |
| cd05631 | 285 | STKc_GRK4 Catalytic domain of the Protein Serine/T | 99.88 | |
| cd07848 | 287 | STKc_CDKL5 Catalytic domain of the Serine/Threonin | 99.88 | |
| KOG0588 | 786 | consensus Serine/threonine protein kinase [Cell cy | 99.88 | |
| cd05612 | 291 | STKc_PRKX_like Catalytic domain of PRKX-like Prote | 99.88 | |
| KOG2052 | 513 | consensus Activin A type IB receptor, serine/threo | 99.88 | |
| PLN00113 | 968 | leucine-rich repeat receptor-like protein kinase; | 99.88 | |
| KOG0592 | 604 | consensus 3-phosphoinositide-dependent protein kin | 99.88 | |
| KOG0659 | 318 | consensus Cdk activating kinase (CAK)/RNA polymera | 99.88 | |
| cd07862 | 290 | STKc_CDK6 Catalytic domain of the Serine/Threonine | 99.87 | |
| KOG0660 | 359 | consensus Mitogen-activated protein kinase [Signal | 99.87 | |
| PHA02988 | 283 | hypothetical protein; Provisional | 99.87 | |
| cd05571 | 323 | STKc_PKB Catalytic domain of the Protein Serine/Th | 99.87 | |
| KOG0661 | 538 | consensus MAPK related serine/threonine protein ki | 99.87 | |
| cd05616 | 323 | STKc_cPKC_beta Catalytic domain of the Protein Ser | 99.87 | |
| KOG0605 | 550 | consensus NDR and related serine/threonine kinases | 99.87 | |
| KOG0582 | 516 | consensus Ste20-like serine/threonine protein kina | 99.86 | |
| KOG0198 | 313 | consensus MEKK and related serine/threonine protei | 99.86 | |
| KOG1025 | 1177 | consensus Epidermal growth factor receptor EGFR an | 99.86 | |
| cd05587 | 324 | STKc_cPKC Catalytic domain of the Protein Serine/T | 99.86 | |
| KOG0033 | 355 | consensus Ca2+/calmodulin-dependent protein kinase | 99.86 | |
| KOG0583 | 370 | consensus Serine/threonine protein kinase [Signal | 99.86 | |
| cd05595 | 323 | STKc_PKB_beta Catalytic domain of the Protein Seri | 99.86 | |
| PTZ00284 | 467 | protein kinase; Provisional | 99.86 | |
| cd05585 | 312 | STKc_YPK1_like Catalytic domain of Yeast Protein K | 99.86 | |
| PTZ00263 | 329 | protein kinase A catalytic subunit; Provisional | 99.86 | |
| cd05593 | 328 | STKc_PKB_gamma Catalytic domain of the Protein Ser | 99.86 | |
| KOG4717 | 864 | consensus Serine/threonine protein kinase [Signal | 99.86 | |
| cd07859 | 338 | STKc_TDY_MAPK_plant Catalytic domain of the Serine | 99.86 | |
| cd05096 | 304 | PTKc_DDR1 Catalytic domain of the Protein Tyrosine | 99.86 | |
| KOG0194 | 474 | consensus Protein tyrosine kinase [Signal transduc | 99.86 | |
| cd07869 | 303 | STKc_PFTAIRE1 Catalytic domain of the Serine/Threo | 99.86 | |
| cd05600 | 333 | STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- | 99.86 | |
| KOG4721 | 904 | consensus Serine/threonine protein kinase, contain | 99.86 | |
| cd05615 | 323 | STKc_cPKC_alpha Catalytic domain of the Protein Se | 99.86 | |
| cd05106 | 374 | PTKc_CSF-1R Catalytic domain of the Protein Tyrosi | 99.86 | |
| cd08529 | 256 | STKc_FA2-like Catalytic domain of the Protein Seri | 99.86 | |
| cd05054 | 337 | PTKc_VEGFR Catalytic domain of the Protein Tyrosin | 99.86 | |
| cd05104 | 375 | PTKc_Kit Catalytic domain of the Protein Tyrosine | 99.86 | |
| cd07871 | 288 | STKc_PCTAIRE3 Catalytic domain of the Serine/Threo | 99.86 | |
| KOG0580 | 281 | consensus Serine/threonine protein kinase [Cell cy | 99.85 | |
| cd05589 | 324 | STKc_PKN Catalytic domain of the Protein Serine/Th | 99.85 | |
| cd05048 | 283 | PTKc_Ror Catalytic Domain of the Protein Tyrosine | 99.85 | |
| PF07714 | 259 | Pkinase_Tyr: Protein tyrosine kinase Protein kinas | 99.85 | |
| cd06649 | 331 | PKc_MEK2 Catalytic domain of the dual-specificity | 99.85 | |
| PTZ00426 | 340 | cAMP-dependent protein kinase catalytic subunit; P | 99.85 | |
| KOG0663 | 419 | consensus Protein kinase PITSLRE and related kinas | 99.85 | |
| cd05591 | 321 | STKc_nPKC_epsilon Catalytic domain of the Protein | 99.85 | |
| cd07853 | 372 | STKc_NLK Catalytic domain of the Serine/Threonine | 99.85 | |
| KOG0596 | 677 | consensus Dual specificity; serine/threonine and t | 99.85 | |
| cd05590 | 320 | STKc_nPKC_eta Catalytic domain of the Protein Seri | 99.85 | |
| cd05049 | 280 | PTKc_Trk Catalytic domain of the Protein Tyrosine | 99.85 | |
| KOG0690 | 516 | consensus Serine/threonine protein kinase [Signal | 99.85 | |
| cd05573 | 350 | STKc_ROCK_NDR_like Catalytic domain of ROCK- and N | 99.85 | |
| cd05072 | 261 | PTKc_Lyn Catalytic domain of the Protein Tyrosine | 99.85 | |
| cd05108 | 316 | PTKc_EGFR Catalytic domain of the Protein Tyrosine | 99.85 | |
| cd05605 | 285 | STKc_GRK4_like Catalytic domain of G protein-coupl | 99.85 | |
| cd05608 | 280 | STKc_GRK1 Catalytic domain of the Protein Serine/T | 99.85 | |
| KOG0199 | 1039 | consensus ACK and related non-receptor tyrosine ki | 99.85 | |
| cd07863 | 288 | STKc_CDK4 Catalytic domain of the Serine/Threonine | 99.85 | |
| cd05105 | 400 | PTKc_PDGFR_alpha Catalytic domain of the Protein T | 99.85 | |
| cd05619 | 316 | STKc_nPKC_theta Catalytic domain of the Protein Se | 99.85 | |
| cd05592 | 316 | STKc_nPKC_theta_delta Catalytic domain of the Prot | 99.85 | |
| cd07875 | 364 | STKc_JNK1 Catalytic domain of the Serine/Threonine | 99.85 | |
| cd06637 | 272 | STKc_TNIK Catalytic domain of the Protein Serine/T | 99.85 | |
| cd05570 | 318 | STKc_PKC Catalytic domain of the Protein Serine/Th | 99.85 | |
| cd05043 | 280 | PTK_Ryk Pseudokinase domain of Ryk (Receptor relat | 99.85 | |
| PTZ00036 | 440 | glycogen synthase kinase; Provisional | 99.85 | |
| cd07876 | 359 | STKc_JNK2 Catalytic domain of the Serine/Threonine | 99.85 | |
| cd05614 | 332 | STKc_MSK2_N N-terminal catalytic domain of the Pro | 99.85 | |
| PHA03212 | 391 | serine/threonine kinase US3; Provisional | 99.85 | |
| cd08223 | 257 | STKc_Nek4 Catalytic domain of the Protein Serine/T | 99.85 | |
| cd07874 | 355 | STKc_JNK3 Catalytic domain of the Serine/Threonine | 99.84 | |
| cd08229 | 267 | STKc_Nek7 Catalytic domain of the Protein Serine/T | 99.84 | |
| KOG0589 | 426 | consensus Serine/threonine protein kinase [General | 99.84 | |
| cd05594 | 325 | STKc_PKB_alpha Catalytic domain of the Protein Ser | 99.84 | |
| cd08228 | 267 | STKc_Nek6 Catalytic domain of the Protein Serine/T | 99.84 | |
| cd05628 | 363 | STKc_NDR1 Catalytic domain of the Protein Serine/T | 99.84 | |
| cd05584 | 323 | STKc_p70S6K Catalytic domain of the Protein Serine | 99.84 | |
| cd07839 | 284 | STKc_CDK5 Catalytic domain of the Serine/Threonine | 99.84 | |
| cd05062 | 277 | PTKc_IGF-1R Catalytic domain of the Protein Tyrosi | 99.84 | |
| KOG0574 | 502 | consensus STE20-like serine/threonine kinase MST [ | 99.84 | |
| cd05599 | 364 | STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel | 99.84 | |
| cd05114 | 256 | PTKc_Tec_Rlk Catalytic domain of the Protein Tyros | 99.84 | |
| cd05033 | 266 | PTKc_EphR Catalytic domain of Ephrin Receptor Prot | 99.84 | |
| cd05093 | 288 | PTKc_TrkB Catalytic domain of the Protein Tyrosine | 99.84 | |
| cd05111 | 279 | PTK_HER3 Pseudokinase domain of the Protein Tyrosi | 99.84 | |
| cd05620 | 316 | STKc_nPKC_delta Catalytic domain of the Protein Se | 99.84 | |
| PTZ00267 | 478 | NIMA-related protein kinase; Provisional | 99.84 | |
| cd07878 | 343 | STKc_p38beta_MAPK11 Catalytic domain of the Serine | 99.84 | |
| cd05067 | 260 | PTKc_Lck_Blk Catalytic domain of the Protein Tyros | 99.84 | |
| cd05582 | 318 | STKc_RSK_N N-terminal catalytic domain of the Prot | 99.84 | |
| cd05035 | 273 | PTKc_Axl_like Catalytic Domain of Axl-like Protein | 99.84 | |
| cd06609 | 274 | STKc_MST3_like Catalytic domain of Mammalian Ste20 | 99.84 | |
| PLN00034 | 353 | mitogen-activated protein kinase kinase; Provision | 99.84 | |
| PTZ00266 | 1021 | NIMA-related protein kinase; Provisional | 99.84 | |
| cd05070 | 260 | PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros | 99.84 | |
| cd05588 | 329 | STKc_aPKC Catalytic domain of the Protein Serine/T | 99.84 | |
| cd05596 | 370 | STKc_ROCK Catalytic domain of the Protein Serine/T | 99.84 | |
| KOG0986 | 591 | consensus G protein-coupled receptor kinase [Signa | 99.84 | |
| cd05109 | 279 | PTKc_HER2 Catalytic domain of the Protein Tyrosine | 99.84 | |
| cd05575 | 323 | STKc_SGK Catalytic domain of the Protein Serine/Th | 99.84 | |
| cd05629 | 377 | STKc_NDR_like_fungal Catalytic domain of Fungal Nu | 99.84 | |
| cd05075 | 272 | PTKc_Axl Catalytic domain of the Protein Tyrosine | 99.84 | |
| cd08224 | 267 | STKc_Nek6_Nek7 Catalytic domain of the Protein Ser | 99.84 | |
| cd05626 | 381 | STKc_LATS2 Catalytic domain of the Protein Serine/ | 99.84 | |
| cd05068 | 261 | PTKc_Frk_like Catalytic domain of Fyn-related kina | 99.84 | |
| cd05071 | 262 | PTKc_Src Catalytic domain of the Protein Tyrosine | 99.84 | |
| cd05601 | 330 | STKc_CRIK Catalytic domain of the Protein Serine/T | 99.84 | |
| cd05632 | 285 | STKc_GRK5 Catalytic domain of the Protein Serine/T | 99.83 | |
| cd06650 | 333 | PKc_MEK1 Catalytic domain of the dual-specificity | 99.83 | |
| cd05116 | 257 | PTKc_Syk Catalytic domain of the Protein Tyrosine | 99.83 | |
| cd05630 | 285 | STKc_GRK6 Catalytic domain of the Protein Serine/T | 99.83 | |
| cd05090 | 283 | PTKc_Ror1 Catalytic domain of the Protein Tyrosine | 99.83 | |
| cd07872 | 309 | STKc_PCTAIRE2 Catalytic domain of the Serine/Threo | 99.83 | |
| KOG4279 | 1226 | consensus Serine/threonine protein kinase [Signal | 99.83 | |
| PHA03211 | 461 | serine/threonine kinase US3; Provisional | 99.83 | |
| PRK13184 | 932 | pknD serine/threonine-protein kinase; Reviewed | 99.83 | |
| cd05052 | 263 | PTKc_Abl Catalytic domain of the Protein Tyrosine | 99.83 | |
| cd05618 | 329 | STKc_aPKC_iota Catalytic domain of the Protein Ser | 99.83 | |
| cd05036 | 277 | PTKc_ALK_LTK Catalytic domain of the Protein Tyros | 99.83 | |
| cd05051 | 296 | PTKc_DDR Catalytic domain of the Protein Tyrosine | 99.83 | |
| cd07861 | 285 | STKc_CDK1_euk Catalytic domain of the Serine/Threo | 99.83 | |
| cd08218 | 256 | STKc_Nek1 Catalytic domain of the Protein Serine/T | 99.83 | |
| cd05059 | 256 | PTKc_Tec_like Catalytic domain of Tec-like Protein | 99.83 | |
| cd05094 | 291 | PTKc_TrkC Catalytic domain of the Protein Tyrosine | 99.83 | |
| cd05607 | 277 | STKc_GRK7 Catalytic domain of the Protein Serine/T | 99.83 | |
| cd05069 | 260 | PTKc_Yes Catalytic domain of the Protein Tyrosine | 99.83 | |
| cd05604 | 325 | STKc_SGK3 Catalytic domain of the Protein Serine/T | 99.83 | |
| PHA03207 | 392 | serine/threonine kinase US3; Provisional | 99.83 | |
| cd05053 | 293 | PTKc_FGFR Catalytic domain of the Protein Tyrosine | 99.83 | |
| cd05061 | 288 | PTKc_InsR Catalytic domain of the Protein Tyrosine | 99.83 | |
| cd05064 | 266 | PTKc_EphR_A10 Catalytic domain of the Protein Tyro | 99.83 | |
| KOG1094 | 807 | consensus Discoidin domain receptor DDR1 [Signal t | 99.83 | |
| KOG0032 | 382 | consensus Ca2+/calmodulin-dependent protein kinase | 99.83 | |
| cd05617 | 327 | STKc_aPKC_zeta Catalytic domain of the Protein Ser | 99.82 | |
| cd05621 | 370 | STKc_ROCK2 Catalytic domain of the Protein Serine/ | 99.82 | |
| cd06625 | 263 | STKc_MEKK3_like Catalytic domain of MAP/ERK kinase | 99.82 | |
| KOG0577 | 948 | consensus Serine/threonine protein kinase [Signal | 99.82 | |
| cd06617 | 283 | PKc_MKK3_6 Catalytic domain of the dual-specificit | 99.82 | |
| cd08225 | 257 | STKc_Nek5 Catalytic domain of the Protein Serine/T | 99.82 | |
| cd05148 | 261 | PTKc_Srm_Brk Catalytic domain of the Protein Tyros | 99.82 | |
| cd05103 | 343 | PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi | 99.82 | |
| cd08220 | 256 | STKc_Nek8 Catalytic domain of the Protein Serine/T | 99.82 | |
| cd05091 | 283 | PTKc_Ror2 Catalytic domain of the Protein Tyrosine | 99.82 | |
| cd05032 | 277 | PTKc_InsR_like Catalytic domain of Insulin Recepto | 99.82 | |
| cd05107 | 401 | PTKc_PDGFR_beta Catalytic domain of the Protein Ty | 99.82 | |
| cd05602 | 325 | STKc_SGK1 Catalytic domain of the Protein Serine/T | 99.82 | |
| cd05113 | 256 | PTKc_Btk_Bmx Catalytic domain of the Protein Tyros | 99.82 | |
| cd05055 | 302 | PTKc_PDGFR Catalytic domain of the Protein Tyrosin | 99.82 | |
| cd07860 | 284 | STKc_CDK2_3 Catalytic domain of the Serine/Threoni | 99.82 | |
| cd05622 | 371 | STKc_ROCK1 Catalytic domain of the Protein Serine/ | 99.82 | |
| cd05623 | 332 | STKc_MRCK_alpha Catalytic domain of the Protein Se | 99.82 | |
| cd05625 | 382 | STKc_LATS1 Catalytic domain of the Protein Serine/ | 99.82 | |
| cd05050 | 288 | PTKc_Musk Catalytic domain of the Protein Tyrosine | 99.82 | |
| cd08217 | 265 | STKc_Nek2 Catalytic domain of the Protein Serine/T | 99.82 | |
| cd06610 | 267 | STKc_OSR1_SPAK Catalytic domain of the Protein Ser | 99.82 | |
| cd05597 | 331 | STKc_DMPK_like Catalytic domain of Myotonic Dystro | 99.82 | |
| cd05598 | 376 | STKc_LATS Catalytic domain of the Protein Serine/T | 99.82 | |
| KOG0611 | 668 | consensus Predicted serine/threonine protein kinas | 99.82 | |
| KOG1989 | 738 | consensus ARK protein kinase family [Signal transd | 99.82 | |
| cd08221 | 256 | STKc_Nek9 Catalytic domain of the Protein Serine/T | 99.82 | |
| cd05045 | 290 | PTKc_RET Catalytic domain of the Protein Tyrosine | 99.82 | |
| cd06636 | 282 | STKc_MAP4K4_6 Catalytic domain of the Protein Seri | 99.82 | |
| cd05034 | 261 | PTKc_Src_like Catalytic domain of Src kinase-like | 99.82 | |
| cd05098 | 307 | PTKc_FGFR1 Catalytic domain of the Protein Tyrosin | 99.82 | |
| cd07837 | 295 | STKc_CdkB_plant Catalytic domain of the Serine/Thr | 99.82 | |
| cd07846 | 286 | STKc_CDKL2_3 Catalytic domain of the Serine/Threon | 99.82 | |
| cd05624 | 331 | STKc_MRCK_beta Catalytic domain of the Protein Ser | 99.82 | |
| cd05073 | 260 | PTKc_Hck Catalytic domain of the Protein Tyrosine | 99.82 | |
| cd06612 | 256 | STKc_MST1_2 Catalytic domain of the Protein Serine | 99.82 | |
| cd08219 | 255 | STKc_Nek3 Catalytic domain of the Protein Serine/T | 99.82 | |
| cd05085 | 250 | PTKc_Fer Catalytic domain of the Protein Tyrosine | 99.82 | |
| cd06654 | 296 | STKc_PAK1 Catalytic domain of the Protein Serine/T | 99.82 | |
| cd06651 | 266 | STKc_MEKK3 Catalytic domain of the Protein Serine/ | 99.82 | |
| KOG4278 | 1157 | consensus Protein tyrosine kinase [Signal transduc | 99.82 | |
| cd07868 | 317 | STKc_CDK8 Catalytic domain of the Serine/Threonine | 99.82 | |
| cd05603 | 321 | STKc_SGK2 Catalytic domain of the Protein Serine/T | 99.82 | |
| cd05627 | 360 | STKc_NDR2 Catalytic domain of the Protein Serine/T | 99.82 | |
| cd05097 | 295 | PTKc_DDR_like Catalytic domain of Discoidin Domain | 99.82 | |
| cd07832 | 286 | STKc_CCRK Catalytic domain of the Serine/Threonine | 99.81 | |
| PF00069 | 260 | Pkinase: Protein kinase domain Protein kinase; unc | 99.81 | |
| cd07835 | 283 | STKc_CDK1_like Catalytic domain of Cyclin-Dependen | 99.81 | |
| cd06639 | 291 | STKc_myosinIIIB Catalytic domain of the Protein Se | 99.81 | |
| cd06624 | 268 | STKc_ASK Catalytic domain of the Protein Serine/Th | 99.81 | |
| cd05099 | 314 | PTKc_FGFR4 Catalytic domain of the Protein Tyrosin | 99.81 | |
| cd06631 | 265 | STKc_YSK4 Catalytic domain of the Protein Serine/T | 99.81 | |
| cd06655 | 296 | STKc_PAK2 Catalytic domain of the Protein Serine/T | 99.81 | |
| cd05084 | 252 | PTKc_Fes Catalytic domain of the Protein Tyrosine | 99.81 | |
| cd07867 | 317 | STKc_CDC2L6 Catalytic domain of Serine/Threonine K | 99.81 | |
| cd05574 | 316 | STKc_phototropin_like Catalytic domain of Phototro | 99.81 | |
| cd05092 | 280 | PTKc_TrkA Catalytic domain of the Protein Tyrosine | 99.81 | |
| cd05074 | 273 | PTKc_Tyro3 Catalytic domain of the Protein Tyrosin | 99.81 | |
| cd06642 | 277 | STKc_STK25-YSK1 Catalytic domain of the Protein Se | 99.81 | |
| cd06643 | 282 | STKc_SLK Catalytic domain of the Protein Serine/Th | 99.81 | |
| cd06626 | 264 | STKc_MEKK4 Catalytic domain of the Protein Serine/ | 99.81 | |
| cd07833 | 288 | STKc_CDKL Catalytic domain of Cyclin-Dependent pro | 99.81 | |
| cd05101 | 304 | PTKc_FGFR2 Catalytic domain of the Protein Tyrosin | 99.81 | |
| cd07870 | 291 | STKc_PFTAIRE2 Catalytic domain of the Serine/Threo | 99.81 | |
| cd05089 | 297 | PTKc_Tie1 Catalytic domain of the Protein Tyrosine | 99.81 | |
| PHA02882 | 294 | putative serine/threonine kinase; Provisional | 99.81 | |
| cd05112 | 256 | PTKc_Itk Catalytic domain of the Protein Tyrosine | 99.81 | |
| cd07879 | 342 | STKc_p38delta_MAPK13 Catalytic domain of the Serin | 99.81 | |
| cd07847 | 286 | STKc_CDKL1_4 Catalytic domain of the Serine/Threon | 99.81 | |
| KOG0696 | 683 | consensus Serine/threonine protein kinase [Signal | 99.81 | |
| cd05060 | 257 | PTKc_Syk_like Catalytic domain of Spleen Tyrosine | 99.81 | |
| cd05063 | 268 | PTKc_EphR_A2 Catalytic domain of the Protein Tyros | 99.81 | |
| cd06619 | 279 | PKc_MKK5 Catalytic domain of the dual-specificity | 99.81 | |
| cd06638 | 286 | STKc_myosinIIIA Catalytic domain of the Protein Se | 99.81 | |
| cd06646 | 267 | STKc_MAP4K5 Catalytic domain of the Protein Serine | 99.81 | |
| KOG0983 | 391 | consensus Mitogen-activated protein kinase (MAPK) | 99.81 | |
| cd05057 | 279 | PTKc_EGFR_like Catalytic domain of Epidermal Growt | 99.81 | |
| cd08528 | 269 | STKc_Nek10 Catalytic domain of the Protein Serine/ | 99.81 | |
| cd07873 | 301 | STKc_PCTAIRE1 Catalytic domain of the Serine/Threo | 99.81 | |
| cd06652 | 265 | STKc_MEKK2 Catalytic domain of the Protein Serine/ | 99.8 | |
| cd05100 | 334 | PTKc_FGFR3 Catalytic domain of the Protein Tyrosin | 99.8 | |
| cd06645 | 267 | STKc_MAP4K3 Catalytic domain of the Protein Serine | 99.8 | |
| cd00192 | 262 | PTKc Catalytic domain of Protein Tyrosine Kinases. | 99.8 | |
| cd05040 | 257 | PTKc_Ack_like Catalytic domain of the Protein Tyro | 99.8 | |
| cd07845 | 309 | STKc_CDK10 Catalytic domain of the Serine/Threonin | 99.8 | |
| cd06616 | 288 | PKc_MKK4 Catalytic domain of the dual-specificity | 99.8 | |
| KOG2345 | 302 | consensus Serine/threonine protein kinase/TGF-beta | 99.8 | |
| cd05087 | 269 | PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein | 99.8 | |
| cd05095 | 296 | PTKc_DDR2 Catalytic domain of the Protein Tyrosine | 99.8 | |
| cd06644 | 292 | STKc_STK10_LOK Catalytic domain of the Protein Ser | 99.8 | |
| cd05580 | 290 | STKc_PKA Catalytic domain of the Protein Serine/Th | 99.8 | |
| cd07877 | 345 | STKc_p38alpha_MAPK14 Catalytic domain of the Serin | 99.8 | |
| cd05586 | 330 | STKc_Sck1_like Catalytic domain of Suppressor of l | 99.8 | |
| cd06608 | 275 | STKc_myosinIII_like Catalytic domain of Class III | 99.8 | |
| PLN00009 | 294 | cyclin-dependent kinase A; Provisional | 99.8 | |
| PHA03209 | 357 | serine/threonine kinase US3; Provisional | 99.8 | |
| cd05082 | 256 | PTKc_Csk Catalytic domain of the Protein Tyrosine | 99.8 | |
| cd05065 | 269 | PTKc_EphR_B Catalytic domain of the Protein Tyrosi | 99.8 | |
| KOG0579 | 1187 | consensus Ste20-like serine/threonine protein kina | 99.8 | |
| cd06629 | 272 | STKc_MAPKKK_Bck1_like Catalytic domain of fungal B | 99.8 | |
| cd05056 | 270 | PTKc_FAK Catalytic domain of the Protein Tyrosine | 99.8 | |
| cd06621 | 287 | PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek | 99.8 | |
| cd05041 | 251 | PTKc_Fes_like Catalytic domain of Fes-like Protein | 99.8 | |
| cd06640 | 277 | STKc_MST4 Catalytic domain of the Protein Serine/T | 99.8 | |
| cd06613 | 262 | STKc_MAP4K3_like Catalytic domain of Mitogen-activ | 99.8 | |
| PLN03150 | 623 | hypothetical protein; Provisional | 99.8 | |
| cd06605 | 265 | PKc_MAPKK Catalytic domain of the dual-specificity | 99.8 | |
| cd05058 | 262 | PTKc_Met_Ron Catalytic domain of the Protein Tyros | 99.8 | |
| cd05088 | 303 | PTKc_Tie2 Catalytic domain of the Protein Tyrosine | 99.8 | |
| KOG0599 | 411 | consensus Phosphorylase kinase gamma subunit [Carb | 99.8 | |
| cd05110 | 303 | PTKc_HER4 Catalytic domain of the Protein Tyrosine | 99.8 | |
| KOG0594 | 323 | consensus Protein kinase PCTAIRE and related kinas | 99.8 | |
| cd07849 | 336 | STKc_ERK1_2_like Catalytic domain of Extracellular | 99.79 | |
| cd06628 | 267 | STKc_MAPKKK_Byr2_like Catalytic domain of fungal B | 99.79 | |
| cd06620 | 284 | PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr | 99.79 | |
| cd06614 | 286 | STKc_PAK Catalytic domain of the Protein Serine/Th | 99.79 | |
| cd05115 | 257 | PTKc_Zap-70 Catalytic domain of the Protein Tyrosi | 99.79 | |
| cd05609 | 305 | STKc_MAST Catalytic domain of the Protein Serine/T | 99.79 | |
| cd08530 | 256 | STKc_CNK2-like Catalytic domain of the Protein Ser | 99.79 | |
| cd06611 | 280 | STKc_SLK_like Catalytic domain of Ste20-like kinas | 99.79 | |
| cd07855 | 334 | STKc_ERK5 Catalytic domain of the Serine/Threonine | 99.79 | |
| KOG0585 | 576 | consensus Ca2+/calmodulin-dependent protein kinase | 99.79 | |
| cd06623 | 264 | PKc_MAPKK_plant_like Catalytic domain of Plant dua | 99.79 | |
| cd05039 | 256 | PTKc_Csk_like Catalytic domain of C-terminal Src k | 99.79 | |
| cd06658 | 292 | STKc_PAK5 Catalytic domain of the Protein Serine/T | 99.79 | |
| cd07838 | 287 | STKc_CDK4_6_like Catalytic domain of Cyclin-Depend | 99.79 | |
| cd07841 | 298 | STKc_CDK7 Catalytic domain of the Serine/Threonine | 99.79 | |
| cd06659 | 297 | STKc_PAK6 Catalytic domain of the Protein Serine/T | 99.79 | |
| cd05044 | 269 | PTKc_c-ros Catalytic domain of the Protein Tyrosin | 99.79 | |
| cd05081 | 284 | PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of | 99.79 | |
| cd05122 | 253 | PKc_STE Catalytic domain of STE family Protein Kin | 99.79 | |
| cd06606 | 260 | STKc_MAPKKK Catalytic domain of the Protein Serine | 99.79 | |
| cd06607 | 307 | STKc_TAO Catalytic domain of the Protein Serine/Th | 99.79 | |
| cd07844 | 291 | STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like | 99.79 | |
| cd06632 | 258 | STKc_MEKK1_plant Catalytic domain of the Protein S | 99.79 | |
| cd07850 | 353 | STKc_JNK Catalytic domain of the Serine/Threonine | 99.79 | |
| cd05080 | 283 | PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the | 99.79 | |
| cd06656 | 297 | STKc_PAK3 Catalytic domain of the Protein Serine/T | 99.79 | |
| cd05066 | 267 | PTKc_EphR_A Catalytic domain of the Protein Tyrosi | 99.79 | |
| cd07858 | 337 | STKc_TEY_MAPK_plant Catalytic domain of the Serine | 99.79 | |
| cd07843 | 293 | STKc_CDC2L1 Catalytic domain of the Serine/Threoni | 99.79 | |
| cd06615 | 308 | PKc_MEK Catalytic domain of the dual-specificity P | 99.79 | |
| PHA03210 | 501 | serine/threonine kinase US3; Provisional | 99.79 | |
| cd06635 | 317 | STKc_TAO1 Catalytic domain of the Protein Serine/T | 99.79 | |
| cd07864 | 302 | STKc_CDK12 Catalytic domain of the Serine/Threonin | 99.79 | |
| cd07865 | 310 | STKc_CDK9 Catalytic domain of the Serine/Threonine | 99.79 | |
| cd07852 | 337 | STKc_MAPK15 Catalytic domain of the Serine/Threoni | 99.78 | |
| cd07836 | 284 | STKc_Pho85 Catalytic domain of the Serine/Threonin | 99.78 | |
| cd07866 | 311 | STKc_BUR1 Catalytic domain of the Serine/Threonine | 99.78 | |
| cd06618 | 296 | PKc_MKK7 Catalytic domain of the dual-specificity | 99.78 | |
| cd08215 | 258 | STKc_Nek Catalytic domain of the Protein Serine/Th | 99.78 | |
| cd07840 | 287 | STKc_CDK9_like Catalytic domain of Cyclin-Dependen | 99.78 | |
| cd06622 | 286 | PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS | 99.78 | |
| cd05042 | 269 | PTKc_Aatyk Catalytic domain of the Protein Tyrosin | 99.78 | |
| cd07831 | 282 | STKc_MOK Catalytic domain of the Serine/Threonine | 99.78 | |
| KOG0200 | 609 | consensus Fibroblast/platelet-derived growth facto | 99.78 | |
| cd05578 | 258 | STKc_Yank1 Catalytic domain of the Protein Serine/ | 99.78 | |
| cd05038 | 284 | PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P | 99.78 | |
| cd06630 | 268 | STKc_MEKK1 Catalytic domain of the Protein Serine/ | 99.78 | |
| cd07842 | 316 | STKc_CDK8_like Catalytic domain of Cyclin-Dependen | 99.78 | |
| cd06917 | 277 | STKc_NAK1_like Catalytic domain of Fungal Nak1-lik | 99.78 | |
| cd06641 | 277 | STKc_MST3 Catalytic domain of the Protein Serine/T | 99.78 | |
| KOG0584 | 632 | consensus Serine/threonine protein kinase [General | 99.78 | |
| KOG0658 | 364 | consensus Glycogen synthase kinase-3 [Carbohydrate | 99.78 | |
| KOG0667 | 586 | consensus Dual-specificity tyrosine-phosphorylatio | 99.78 | |
| cd07880 | 343 | STKc_p38gamma_MAPK12 Catalytic domain of the Serin | 99.78 | |
| smart00219 | 258 | TyrKc Tyrosine kinase, catalytic domain. Phosphotr | 99.78 | |
| cd06648 | 285 | STKc_PAK_II Catalytic domain of the Protein Serine | 99.78 | |
| cd05633 | 279 | STKc_GRK3 Catalytic domain of the Protein Serine/T | 99.78 | |
| cd05083 | 254 | PTKc_Chk Catalytic domain of the Protein Tyrosine | 99.78 | |
| cd05047 | 270 | PTKc_Tie Catalytic domain of Tie Protein Tyrosine | 99.77 | |
| cd06627 | 254 | STKc_Cdc7_like Catalytic domain of Cell division c | 99.77 | |
| cd05581 | 280 | STKc_PDK1 Catalytic domain of the Protein Serine/T | 99.77 | |
| KOG1006 | 361 | consensus Mitogen-activated protein kinase (MAPK) | 99.77 | |
| KOG0610 | 459 | consensus Putative serine/threonine protein kinase | 99.77 | |
| cd06653 | 264 | STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina | 99.77 | |
| cd06647 | 293 | STKc_PAK_I Catalytic domain of the Protein Serine/ | 99.77 | |
| cd05606 | 278 | STKc_beta_ARK Catalytic domain of the Protein Seri | 99.77 | |
| KOG4257 | 974 | consensus Focal adhesion tyrosine kinase FAK, cont | 99.77 | |
| cd08227 | 327 | PK_STRAD_alpha Pseudokinase domain of STE20-relate | 99.77 | |
| cd05079 | 284 | PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the | 99.77 | |
| cd05118 | 283 | STKc_CMGC Catalytic domain of CMGC family Serine/T | 99.77 | |
| cd07857 | 332 | STKc_MPK1 Catalytic domain of the Serine/Threonine | 99.77 | |
| cd07851 | 343 | STKc_p38 Catalytic domain of the Serine/Threonine | 99.77 | |
| KOG4236 | 888 | consensus Serine/threonine protein kinase PKC mu/P | 99.77 | |
| cd06634 | 308 | STKc_TAO2 Catalytic domain of the Protein Serine/T | 99.77 | |
| PHA03390 | 267 | pk1 serine/threonine-protein kinase 1; Provisional | 99.77 | |
| cd05078 | 258 | PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain | 99.76 | |
| cd07834 | 330 | STKc_MAPK Catalytic domain of the Serine/Threonine | 99.76 | |
| cd05577 | 277 | STKc_GRK Catalytic domain of the Protein Serine/Th | 99.76 | |
| KOG0586 | 596 | consensus Serine/threonine protein kinase [General | 99.76 | |
| cd07856 | 328 | STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre | 99.76 | |
| cd06633 | 313 | STKc_TAO3 Catalytic domain of the Protein Serine/T | 99.76 | |
| cd07829 | 282 | STKc_CDK_like Catalytic domain of Cyclin-Dependent | 99.76 | |
| cd05046 | 275 | PTK_CCK4 Pseudokinase domain of the Protein Tyrosi | 99.76 | |
| KOG1024 | 563 | consensus Receptor-like protein tyrosine kinase RY | 99.75 | |
| cd05572 | 262 | STKc_cGK_PKG Catalytic domain of the Protein Serin | 99.75 | |
| cd07830 | 283 | STKc_MAK_like Catalytic domain of Male germ cell-A | 99.75 | |
| KOG4645 | 1509 | consensus MAPKKK (MAP kinase kinase kinase) SSK2 a | 99.75 | |
| cd05037 | 259 | PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the | 99.75 | |
| cd05086 | 268 | PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi | 99.75 | |
| cd05613 | 290 | STKc_MSK1_N N-terminal catalytic domain of the Pro | 99.75 | |
| cd05583 | 288 | STKc_MSK_N N-terminal catalytic domain of the Prot | 99.75 | |
| cd05579 | 265 | STKc_MAST_like Catalytic domain of Microtubule-ass | 99.75 | |
| cd05077 | 262 | PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th | 99.75 | |
| KOG4250 | 732 | consensus TANK binding protein kinase TBK1 [Signal | 99.75 | |
| cd06657 | 292 | STKc_PAK4 Catalytic domain of the Protein Serine/T | 99.75 | |
| cd07854 | 342 | STKc_MAPK4_6 Catalytic domain of the Serine/Threon | 99.75 | |
| cd08222 | 260 | STKc_Nek11 Catalytic domain of the Protein Serine/ | 99.75 | |
| KOG0662 | 292 | consensus Cyclin-dependent kinase CDK5 [Intracellu | 99.75 | |
| cd05611 | 260 | STKc_Rim15_like Catalytic domain of fungal Rim15-l | 99.75 | |
| PTZ00024 | 335 | cyclin-dependent protein kinase; Provisional | 99.74 | |
| KOG0666 | 438 | consensus Cyclin C-dependent kinase CDK8 [Transcri | 99.74 | |
| cd05123 | 250 | STKc_AGC Catalytic domain of AGC family Protein Se | 99.73 | |
| cd05076 | 274 | PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th | 99.73 | |
| KOG1035 | 1351 | consensus eIF-2alpha kinase GCN2 [Translation, rib | 99.73 | |
| KOG0671 | 415 | consensus LAMMER dual specificity kinases [Signal | 99.72 | |
| KOG0614 | 732 | consensus cGMP-dependent protein kinase [Signal tr | 99.72 | |
| KOG0587 | 953 | consensus Traf2- and Nck-interacting kinase and re | 99.72 | |
| KOG1151 | 775 | consensus Tousled-like protein kinase [Signal tran | 99.71 | |
| cd08216 | 314 | PK_STRAD Pseudokinase domain of STE20-related kina | 99.71 | |
| KOG0612 | 1317 | consensus Rho-associated, coiled-coil containing p | 99.71 | |
| PLN03225 | 566 | Serine/threonine-protein kinase SNT7; Provisional | 99.71 | |
| KOG0984 | 282 | consensus Mitogen-activated protein kinase (MAPK) | 99.7 | |
| cd08226 | 328 | PK_STRAD_beta Pseudokinase domain of STE20-related | 99.69 | |
| KOG0604 | 400 | consensus MAP kinase-activated protein kinase 2 [S | 99.69 | |
| KOG0607 | 463 | consensus MAP kinase-interacting kinase and relate | 99.68 | |
| cd05610 | 669 | STKc_MASTL Catalytic domain of the Protein Serine/ | 99.68 | |
| KOG0669 | 376 | consensus Cyclin T-dependent kinase CDK9 [Cell cyc | 99.68 | |
| PLN03224 | 507 | probable serine/threonine protein kinase; Provisio | 99.67 | |
| KOG0695 | 593 | consensus Serine/threonine protein kinase [Signal | 99.67 | |
| smart00220 | 244 | S_TKc Serine/Threonine protein kinases, catalytic | 99.66 | |
| KOG0603 | 612 | consensus Ribosomal protein S6 kinase [Signal tran | 99.66 | |
| smart00750 | 176 | KIND kinase non-catalytic C-lobe domain. It is an | 99.65 | |
| KOG0668 | 338 | consensus Casein kinase II, alpha subunit [Signal | 99.61 | |
| KOG0664 | 449 | consensus Nemo-like MAPK-related serine/threonine | 99.6 | |
| KOG0670 | 752 | consensus U4/U6-associated splicing factor PRP4 [R | 99.6 | |
| KOG1027 | 903 | consensus Serine/threonine protein kinase and endo | 99.6 | |
| cd05576 | 237 | STKc_RPK118_like Catalytic domain of the Protein S | 99.58 | |
| KOG1290 | 590 | consensus Serine/threonine protein kinase [Signal | 99.56 | |
| KOG0472 | 565 | consensus Leucine-rich repeat protein [Function un | 99.56 | |
| KOG0608 | 1034 | consensus Warts/lats-like serine threonine kinases | 99.53 | |
| KOG0444 | 1255 | consensus Cytoskeletal regulator Flightless-I (con | 99.53 | |
| smart00221 | 225 | STYKc Protein kinase; unclassified specificity. Ph | 99.52 | |
| KOG0617 | 264 | consensus Ras suppressor protein (contains leucine | 99.51 | |
| KOG0472 | 565 | consensus Leucine-rich repeat protein [Function un | 99.44 | |
| PRK15387 | 788 | E3 ubiquitin-protein ligase SspH2; Provisional | 99.4 | |
| cd00180 | 215 | PKc Catalytic domain of Protein Kinases. Protein K | 99.4 | |
| KOG0665 | 369 | consensus Jun-N-terminal kinase (JNK) [Signal tran | 99.4 | |
| KOG0444 | 1255 | consensus Cytoskeletal regulator Flightless-I (con | 99.39 | |
| KOG1152 | 772 | consensus Signal transduction serine/threonine kin | 99.38 | |
| KOG1345 | 378 | consensus Serine/threonine kinase [Signal transduc | 99.36 | |
| PRK15387 | 788 | E3 ubiquitin-protein ligase SspH2; Provisional | 99.34 | |
| KOG0576 | 829 | consensus Mitogen-activated protein kinase kinase | 99.33 | |
| KOG4194 | 873 | consensus Membrane glycoprotein LIG-1 [Signal tran | 99.33 | |
| KOG0617 | 264 | consensus Ras suppressor protein (contains leucine | 99.33 | |
| KOG4194 | 873 | consensus Membrane glycoprotein LIG-1 [Signal tran | 99.33 | |
| PRK15370 | 754 | E3 ubiquitin-protein ligase SlrP; Provisional | 99.31 | |
| PRK15370 | 754 | E3 ubiquitin-protein ligase SlrP; Provisional | 99.28 | |
| KOG0606 | 1205 | consensus Microtubule-associated serine/threonine | 99.26 | |
| PLN00181 | 793 | protein SPA1-RELATED; Provisional | 99.24 | |
| KOG0195 | 448 | consensus Integrin-linked kinase [Signal transduct | 99.22 | |
| KOG1033 | 516 | consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati | 99.19 | |
| PLN03150 | 623 | hypothetical protein; Provisional | 99.19 | |
| KOG1167 | 418 | consensus Serine/threonine protein kinase of the C | 99.18 | |
| PLN03210 | 1153 | Resistant to P. syringae 6; Provisional | 99.17 | |
| KOG0618 | 1081 | consensus Serine/threonine phosphatase 2C containi | 99.14 | |
| PLN03210 | 1153 | Resistant to P. syringae 6; Provisional | 99.07 | |
| KOG0532 | 722 | consensus Leucine-rich repeat (LRR) protein, conta | 99.06 | |
| KOG0532 | 722 | consensus Leucine-rich repeat (LRR) protein, conta | 99.04 | |
| KOG4237 | 498 | consensus Extracellular matrix protein slit, conta | 99.04 | |
| KOG0618 | 1081 | consensus Serine/threonine phosphatase 2C containi | 99.04 | |
| PF14531 | 288 | Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_ | 98.98 | |
| KOG0603 | 612 | consensus Ribosomal protein S6 kinase [Signal tran | 98.97 | |
| COG0515 | 384 | SPS1 Serine/threonine protein kinase [General func | 98.91 | |
| KOG1164 | 322 | consensus Casein kinase (serine/threonine/tyrosine | 98.91 | |
| PRK09188 | 365 | serine/threonine protein kinase; Provisional | 98.88 | |
| KOG0590 | 601 | consensus Checkpoint kinase and related serine/thr | 98.81 | |
| PF13855 | 61 | LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RF | 98.81 | |
| KOG1240 | 1431 | consensus Protein kinase containing WD40 repeats [ | 98.8 | |
| PF14580 | 175 | LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQ | 98.73 | |
| PF14580 | 175 | LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQ | 98.71 | |
| KOG1165 | 449 | consensus Casein kinase (serine/threonine/tyrosine | 98.71 | |
| cd00116 | 319 | LRR_RI Leucine-rich repeats (LRRs), ribonuclease i | 98.7 | |
| cd00116 | 319 | LRR_RI Leucine-rich repeats (LRRs), ribonuclease i | 98.69 | |
| COG4886 | 394 | Leucine-rich repeat (LRR) protein [Function unknow | 98.64 | |
| KOG1259 | 490 | consensus Nischarin, modulator of integrin alpha5 | 98.59 | |
| COG4886 | 394 | Leucine-rich repeat (LRR) protein [Function unknow | 98.56 | |
| KOG1166 | 974 | consensus Mitotic checkpoint serine/threonine prot | 98.49 | |
| KOG1023 | 484 | consensus Natriuretic peptide receptor, guanylate | 98.48 | |
| KOG1163 | 341 | consensus Casein kinase (serine/threonine/tyrosine | 98.47 | |
| PF13855 | 61 | LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RF | 98.44 | |
| KOG1859 | 1096 | consensus Leucine-rich repeat proteins [General fu | 98.35 | |
| KOG4237 | 498 | consensus Extracellular matrix protein slit, conta | 98.33 | |
| KOG1259 | 490 | consensus Nischarin, modulator of integrin alpha5 | 98.31 | |
| KOG4579 | 177 | consensus Leucine-rich repeat (LRR) protein associ | 98.03 | |
| cd05147 | 190 | RIO1_euk RIO kinase family; eukaryotic RIO1, catal | 98.01 | |
| KOG3207 | 505 | consensus Beta-tubulin folding cofactor E [Posttra | 98.0 | |
| KOG3207 | 505 | consensus Beta-tubulin folding cofactor E [Posttra | 97.91 | |
| KOG4158 | 598 | consensus BRPK/PTEN-induced protein kinase [Signal | 97.9 | |
| PF08263 | 43 | LRRNT_2: Leucine rich repeat N-terminal domain; In | 97.89 | |
| PRK10359 | 232 | lipopolysaccharide core biosynthesis protein; Prov | 97.87 | |
| PF12799 | 44 | LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_ | 97.87 | |
| PF12799 | 44 | LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_ | 97.8 | |
| KOG4579 | 177 | consensus Leucine-rich repeat (LRR) protein associ | 97.76 | |
| PRK12274 | 218 | serine/threonine protein kinase; Provisional | 97.75 | |
| cd05145 | 190 | RIO1_like RIO kinase family; RIO1, RIO3 and simila | 97.72 | |
| KOG0531 | 414 | consensus Protein phosphatase 1, regulatory subuni | 97.62 | |
| KOG0590 | 601 | consensus Checkpoint kinase and related serine/thr | 97.48 | |
| KOG0531 | 414 | consensus Protein phosphatase 1, regulatory subuni | 97.43 | |
| KOG1859 | 1096 | consensus Leucine-rich repeat proteins [General fu | 97.4 | |
| cd05144 | 198 | RIO2_C RIO kinase family; RIO2, C-terminal catalyt | 97.39 | |
| PRK15386 | 426 | type III secretion protein GogB; Provisional | 97.3 | |
| KOG4658 | 889 | consensus Apoptotic ATPase [Signal transduction me | 97.25 | |
| PRK15386 | 426 | type III secretion protein GogB; Provisional | 97.19 | |
| KOG4658 | 889 | consensus Apoptotic ATPase [Signal transduction me | 97.18 | |
| smart00090 | 237 | RIO RIO-like kinase. | 97.14 | |
| KOG0601 | 524 | consensus Cyclin-dependent kinase WEE1 [Cell cycle | 97.13 | |
| PRK14879 | 211 | serine/threonine protein kinase; Provisional | 96.85 | |
| PRK09605 | 535 | bifunctional UGMP family protein/serine/threonine | 96.84 | |
| KOG1644 | 233 | consensus U2-associated snRNP A' protein [RNA proc | 96.76 | |
| KOG1909 | 382 | consensus Ran GTPase-activating protein [RNA proce | 96.7 | |
| TIGR03724 | 199 | arch_bud32 Kae1-associated kinase Bud32. Members o | 96.66 | |
| KOG2739 | 260 | consensus Leucine-rich acidic nuclear protein [Cel | 96.54 | |
| KOG0606 | 1205 | consensus Microtubule-associated serine/threonine | 96.43 | |
| KOG2982 | 418 | consensus Uncharacterized conserved protein [Funct | 96.37 | |
| KOG1644 | 233 | consensus U2-associated snRNP A' protein [RNA proc | 96.29 | |
| KOG2982 | 418 | consensus Uncharacterized conserved protein [Funct | 96.18 | |
| TIGR01982 | 437 | UbiB 2-polyprenylphenol 6-hydroxylase. This model | 96.17 | |
| KOG2739 | 260 | consensus Leucine-rich acidic nuclear protein [Cel | 96.11 | |
| KOG1909 | 382 | consensus Ran GTPase-activating protein [RNA proce | 95.92 | |
| PRK04750 | 537 | ubiB putative ubiquinone biosynthesis protein UbiB | 95.88 | |
| KOG3665 | 699 | consensus ZYG-1-like serine/threonine protein kina | 95.09 | |
| cd05119 | 187 | RIO RIO kinase family, catalytic domain. The RIO k | 95.05 | |
| COG5238 | 388 | RNA1 Ran GTPase-activating protein (RanGAP) involv | 94.91 | |
| PF00560 | 22 | LRR_1: Leucine Rich Repeat; InterPro: IPR001611 Le | 94.79 | |
| PF00560 | 22 | LRR_1: Leucine Rich Repeat; InterPro: IPR001611 Le | 94.58 | |
| KOG3665 | 699 | consensus ZYG-1-like serine/threonine protein kina | 94.48 | |
| KOG2120 | 419 | consensus SCF ubiquitin ligase, Skp2 component [Po | 94.45 | |
| COG5238 | 388 | RNA1 Ran GTPase-activating protein (RanGAP) involv | 94.31 | |
| PF13504 | 17 | LRR_7: Leucine rich repeat; PDB: 3OJA_B 3G06_A 1OO | 94.2 | |
| KOG2120 | 419 | consensus SCF ubiquitin ligase, Skp2 component [Po | 93.7 |
| >PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-45 Score=437.74 Aligned_cols=530 Identities=24% Similarity=0.331 Sum_probs=267.9
Q ss_pred CCCCCc-eecccceeehhhhcc----ccchhhhhhhhhhhccccccccccCCCCCCCChhhHHHHHHHHHhCCCCCC---
Q 042825 6 WHPSNF-QLFGFPRLTFRDCMT----ATSELEREKTERVQGDRRKKRRKIPSASSNQSRPDAAVMQDLKASFVIPKR--- 77 (631)
Q Consensus 6 ~~~~~~-~~~~~~~~~~~~~~~----~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~k~~~~~~~~--- 77 (631)
..|+.| ++.+++.|.+.++.. +.......+|+.|+++.|++++.+|.+...........+...+.....|..
T Consensus 323 ~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~~~~L~~L~Ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~p~~~~~ 402 (968)
T PLN00113 323 KIPVALTSLPRLQVLQLWSNKFSGEIPKNLGKHNNLTVLDLSTNNLTGEIPEGLCSSGNLFKLILFSNSLEGEIPKSLGA 402 (968)
T ss_pred cCChhHhcCCCCCEEECcCCCCcCcCChHHhCCCCCcEEECCCCeeEeeCChhHhCcCCCCEEECcCCEecccCCHHHhC
Confidence 356667 777888888877743 222335688999999999999888876543321100000000000000000
Q ss_pred ---CCCCCCCCCCccceee---CCCCCeEEEEeCCCCCcccCcchhcCCccCceeecccCcccCCCCcCcc--ccccccc
Q 042825 78 ---LKWSDPDPCQWSHVIC---SDDGQVTNIELQDQNRKGTVPPILKKLSSMAVMYLENNQLRGPIPSLVG--SLEFFSA 149 (631)
Q Consensus 78 ---~~w~~~~~C~w~gv~C---~~~~~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~L~~N~l~g~lP~~~~--~L~~L~l 149 (631)
+..-.-..|...|..- .....+..|+|++|.++|.+|..+..+++|+.|+|++|++.|.+|..++ +|+.|++
T Consensus 403 ~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~~~L~~L~l 482 (968)
T PLN00113 403 CRSLRRVRLQDNSFSGELPSEFTKLPLVYFLDISNNNLQGRINSRKWDMPSLQMLSLARNKFFGGLPDSFGSKRLENLDL 482 (968)
T ss_pred CCCCCEEECcCCEeeeECChhHhcCCCCCEEECcCCcccCccChhhccCCCCcEEECcCceeeeecCcccccccceEEEC
Confidence 0000000011111000 0122344555555555555555455555555555555555555554433 4555555
Q ss_pred ccccceecCCCCCCcCCCCCCcEEEccCCcccccCCCCCCCCccCcCCCCCCCEEEeecCcCcccCChhhccCCCCCCEE
Q 042825 150 YEANISGTIPDFIGTDTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTL 229 (631)
Q Consensus 150 ~~n~l~g~ip~~~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~~~~~~~~l~~L~~L~L~~N~l~g~iP~~~~~~l~~L~~L 229 (631)
++|+++|.+|..+. .+++|+.|+|++|+++|.+|..+ +++++|++|+|++|+++|.+|.. +..+++|+.|
T Consensus 483 s~n~l~~~~~~~~~--~l~~L~~L~Ls~N~l~~~~p~~~-------~~l~~L~~L~Ls~N~l~~~~p~~-~~~l~~L~~L 552 (968)
T PLN00113 483 SRNQFSGAVPRKLG--SLSELMQLKLSENKLSGEIPDEL-------SSCKKLVSLDLSHNQLSGQIPAS-FSEMPVLSQL 552 (968)
T ss_pred cCCccCCccChhhh--hhhccCEEECcCCcceeeCChHH-------cCccCCCEEECCCCcccccCChh-HhCcccCCEE
Confidence 55555555555554 45555555555555555555443 25555666666666666555543 5555666666
Q ss_pred EccCCCCcccCCCCCC-CCceEEeecCCCcccCCCCCCccCccchhhHHhhhhcCCCchhhcccCCCCCCCCCccccccc
Q 042825 230 NLTNNLLQGPTPRFNN-SKLTVDMRTGSNCFCLDDPGLACDSRVNILLSIAESMGYPEVLAESRKGNDPCPTYKYWKGIS 308 (631)
Q Consensus 230 ~ls~N~l~g~~p~~~~-~~~~~~l~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 308 (631)
+|++|+++|.+|.... ......+++++|.+.+.+|... .+..+ ....
T Consensus 553 ~Ls~N~l~~~~p~~l~~l~~L~~l~ls~N~l~~~~p~~~------~~~~~---------~~~~----------------- 600 (968)
T PLN00113 553 DLSQNQLSGEIPKNLGNVESLVQVNISHNHLHGSLPSTG------AFLAI---------NASA----------------- 600 (968)
T ss_pred ECCCCcccccCChhHhcCcccCEEeccCCcceeeCCCcc------hhccc---------Chhh-----------------
Confidence 6666666655554322 1223334455565555544310 00000 0001
Q ss_pred cCCCceeccceEEeecCCCCCccCCCCCCCCCCC-CCCceEEEEEeehhhhhHHHHHHHHHHhhhhhcccCCCCCCCccc
Q 042825 309 CDIGGNITENVVVITDGNPDVEKESNSPGSPPGS-GSKIQILGITLGSVIGDFCGLFVVGLGVFLYIRNKKSSETVPIQV 387 (631)
Q Consensus 309 ~~~~~~~p~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~~~~~~~ii~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 387 (631)
..||+..++..+....+++. .++...+.+++++++++++++++++++++ ++|+|++.+.+...
T Consensus 601 --------------~~~n~~lc~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~- 664 (968)
T PLN00113 601 --------------VAGNIDLCGGDTTSGLPPCKRVRKTPSWWFYITCTLGAFLVLALVAFGFV-FIRGRNNLELKRVE- 664 (968)
T ss_pred --------------hcCCccccCCccccCCCCCccccccceeeeehhHHHHHHHHHHHHHHHHH-HHHhhhcccccccc-
Confidence 12333222211111111111 11222233344444444333333333222 33333221111100
Q ss_pred cCCcccCCcccccccC-CCCCcCHHHHHhhcCCcccceeecCCCceEEEEEEe-cCCcEEEEEEEecCCCCHHHHHHHHH
Q 042825 388 LRPRICGISVVHSVDF-GDMAIPIQVLRNATNNFSEENRLGRGGVGTVYKGEL-KDGTEVGVKRMELGSVTEQGIAQFES 465 (631)
Q Consensus 388 ~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~t~~f~~~~~iG~G~fg~Vyk~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~ 465 (631)
.. .+......++. ....++++++. ..|...++||+|+||.||+|+. .++..||||++....... ..
T Consensus 665 -~~--~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~------~~ 732 (968)
T PLN00113 665 -NE--DGTWELQFFDSKVSKSITINDIL---SSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNSIP------SS 732 (968)
T ss_pred -cc--cccccccccccccchhhhHHHHH---hhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCcccc------HH
Confidence 00 00001111110 11224445443 4577788999999999999997 468999999986532211 22
Q ss_pred HHHHHhc----------------------------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------
Q 042825 466 EITVLTK----------------------------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------ 505 (631)
Q Consensus 466 Ei~~l~~----------------------------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------ 505 (631)
|++++++ |+|.++++ .++|.++.+|+.++|+|
T Consensus 733 ~~~~l~~l~HpnIv~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~--------~l~~~~~~~i~~~ia~~L~yLH~~~~~~i 804 (968)
T PLN00113 733 EIADMGKLQHPNIVKLIGLCRSEKGAYLIHEYIEGKNLSEVLR--------NLSWERRRKIAIGIAKALRFLHCRCSPAV 804 (968)
T ss_pred HHHHHhhCCCCCcceEEEEEEcCCCCEEEEeCCCCCcHHHHHh--------cCCHHHHHHHHHHHHHHHHHhccCCCCCe
Confidence 3444433 55555552 38999999999999876
Q ss_pred --CCcE----E--------EeeccccccCCCCccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCC
Q 042825 506 --DDMR----V--------ADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVV 571 (631)
Q Consensus 506 --~~~k----l--------~DFGla~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~ 571 (631)
.++| + .+||.++... ......||.+|||||++.+..++.|+|||||||++|||+||+.||
T Consensus 805 iH~dlkp~Nil~~~~~~~~~~~~~~~~~~------~~~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~ 878 (968)
T PLN00113 805 VVGNLSPEKIIIDGKDEPHLRLSLPGLLC------TDTKCFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPA 878 (968)
T ss_pred ecCCCCHHhEEECCCCceEEEeccccccc------cCCCccccccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCC
Confidence 1111 1 1244433221 112346889999999999999999999999999999999999999
Q ss_pred CCCCCChHHHHHHHHHhHhhhcC---------------------ChhHHHHHHhhcCCChhhHHhHHHHHHH
Q 042825 572 DATHSDPEYIIHLATWFQKMHKN---------------------HDTFQMAIDKTIQLDEENLANVSTVAEL 622 (631)
Q Consensus 572 ~~~~~~~~~~~~l~~~~~~~~~~---------------------~~~l~~~id~~L~~d~~~r~~~~~vl~l 622 (631)
+..... ...+.+|++..... ..++.+++.+|+..+|++||++.++++.
T Consensus 879 ~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~ 947 (968)
T PLN00113 879 DAEFGV---HGSIVEWARYCYSDCHLDMWIDPSIRGDVSVNQNEIVEVMNLALHCTATDPTARPCANDVLKT 947 (968)
T ss_pred CcccCC---CCcHHHHHHHhcCccchhheeCccccCCCCccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHH
Confidence 744322 12344444322111 0134456667777777777777776654
|
|
| >KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-34 Score=298.38 Aligned_cols=218 Identities=44% Similarity=0.731 Sum_probs=176.7
Q ss_pred CCCcCHHHHHhhcCCcccceeecCCCceEEEEEEecCCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc------------
Q 042825 405 DMAIPIQVLRNATNNFSEENRLGRGGVGTVYKGELKDGTEVGVKRMELGSVTEQGIAQFESEITVLTK------------ 472 (631)
Q Consensus 405 ~~~~~~~~l~~~t~~f~~~~~iG~G~fg~Vyk~~~~~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~------------ 472 (631)
...|+++|+++||++|+..++||+|+||.||||.+++|+.||||++....... .++|.+|++++.+
T Consensus 62 ~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~--~~eF~~Ei~~ls~l~H~Nlv~LlGy 139 (361)
T KOG1187|consen 62 LRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQG--EREFLNEVEILSRLRHPNLVKLLGY 139 (361)
T ss_pred cceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcc--hhHHHHHHHHHhcCCCcCcccEEEE
Confidence 45699999999999999999999999999999999999999999887654321 4569999999876
Q ss_pred -----------------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC---------------------------CCc
Q 042825 473 -----------------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG---------------------------DDM 508 (631)
Q Consensus 473 -----------------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g---------------------------~~~ 508 (631)
|+|.++|+... .. +|+|.+|++||+++|+| .+.
T Consensus 140 C~e~~~~~~LVYEym~nGsL~d~L~~~~--~~-~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~a 216 (361)
T KOG1187|consen 140 CLEGGEHRLLVYEYMPNGSLEDHLHGKK--GE-PLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNA 216 (361)
T ss_pred EecCCceEEEEEEccCCCCHHHHhCCCC--CC-CCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCE
Confidence 78888887521 11 89999999999999998 356
Q ss_pred EEEeeccccccCCCCccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHh
Q 042825 509 RVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWF 588 (631)
Q Consensus 509 kl~DFGla~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~ 588 (631)
||+|||+|+..+.. .....+...||.+|+|||++..+..+.|+|||||||+|+|++||++|.+..... ....+..|+
T Consensus 217 KlsDFGLa~~~~~~-~~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~--~~~~l~~w~ 293 (361)
T KOG1187|consen 217 KLSDFGLAKLGPEG-DTSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPR--GELSLVEWA 293 (361)
T ss_pred EccCccCcccCCcc-ccceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCc--ccccHHHHH
Confidence 89999999876531 111111118999999999999999999999999999999999999999865422 234488998
Q ss_pred HhhhcCChhHHHHHHhhcCCChhhH-HhHHHHHHHHHhhhccCC
Q 042825 589 QKMHKNHDTFQMAIDKTIQLDEENL-ANVSTVAELGDHCCANEP 631 (631)
Q Consensus 589 ~~~~~~~~~l~~~id~~L~~d~~~r-~~~~~vl~lal~C~~~~P 631 (631)
...+... .+.+++|+.|..+.... .++.+++++|++|++.+|
T Consensus 294 ~~~~~~~-~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~ 336 (361)
T KOG1187|consen 294 KPLLEEG-KLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDP 336 (361)
T ss_pred HHHHHCc-chhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCC
Confidence 7777654 78999999986333322 678889999999999876
|
|
| >KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.2e-26 Score=241.68 Aligned_cols=199 Identities=28% Similarity=0.420 Sum_probs=155.1
Q ss_pred cceeecCCCceEEEEEEecCCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc-----------------------------
Q 042825 422 EENRLGRGGVGTVYKGELKDGTEVGVKRMELGSVTEQGIAQFESEITVLTK----------------------------- 472 (631)
Q Consensus 422 ~~~~iG~G~fg~Vyk~~~~~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~----------------------------- 472 (631)
..+.||+|+||+||+|.++....||||++..........++|.+|+.+|.+
T Consensus 45 ~~~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVtEy~~~ 124 (362)
T KOG0192|consen 45 IEEVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVTEYMPG 124 (362)
T ss_pred hhhhcccCCceeEEEEEeCCceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEEEeCCC
Confidence 345699999999999999754459999998776655557899999999986
Q ss_pred CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC-------------------------C-CcEEEeeccccccCCCCccc
Q 042825 473 GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG-------------------------D-DMRVADFGLVRLVPENGKHS 526 (631)
Q Consensus 473 gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g-------------------------~-~~kl~DFGla~~~~~~~~~~ 526 (631)
|+|.++++.. ....++|.+++++|+++|+| . .+||+|||+++...... .
T Consensus 125 GsL~~~l~~~---~~~~l~~~~~l~~aldiArGm~YLH~~~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~~--~ 199 (362)
T KOG0192|consen 125 GSLSVLLHKK---RKRKLPLKVRLRIALDIARGMEYLHSEGPIIHRDLKSDNILVDLKGKTLKIADFGLSREKVISK--T 199 (362)
T ss_pred CcHHHHHhhc---ccCCCCHHHHHHHHHHHHHHHHHHhcCCCeeecccChhhEEEcCCCCEEEECCCccceeecccc--c
Confidence 8888888752 45689999999999999997 2 57899999999874221 2
Q ss_pred cccccccCcccccccccc--cCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHH-HHhHhhhc--CChhHHHH
Q 042825 527 ILTKVAGTFGYLAPEYIV--TGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLA-TWFQKMHK--NHDTFQMA 601 (631)
Q Consensus 527 ~~~~~~gt~~Y~aPE~~~--~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~-~~~~~~~~--~~~~l~~~ 601 (631)
..+...||..|||||++. ...|+.|+|||||||+||||+||+.||.+.... .....+. .-.+...+ ....+.++
T Consensus 200 ~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~-~~~~~v~~~~~Rp~~p~~~~~~l~~l 278 (362)
T KOG0192|consen 200 SMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPV-QVASAVVVGGLRPPIPKECPPHLSSL 278 (362)
T ss_pred cccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCHH-HHHHHHHhcCCCCCCCccCCHHHHHH
Confidence 344578999999999999 568999999999999999999999999876542 1111111 11111111 24678999
Q ss_pred HHhhcCCChhhHHhHHHHHHHHHhh
Q 042825 602 IDKTIQLDEENLANVSTVAELGDHC 626 (631)
Q Consensus 602 id~~L~~d~~~r~~~~~vl~lal~C 626 (631)
+..|+..||..||+..+++..-..+
T Consensus 279 ~~~CW~~dp~~RP~f~ei~~~l~~~ 303 (362)
T KOG0192|consen 279 MERCWLVDPSRRPSFLEIVSRLESI 303 (362)
T ss_pred HHHhCCCCCCcCCCHHHHHHHHHHH
Confidence 9999999999999999887765444
|
|
| >KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.94 E-value=5.9e-27 Score=246.05 Aligned_cols=196 Identities=20% Similarity=0.326 Sum_probs=152.6
Q ss_pred CCcccceeecCCCceEEEEEEe-cCCcEEEEEEEecCCC-CHHHHHHHHHHHHHHhc-----------------------
Q 042825 418 NNFSEENRLGRGGVGTVYKGEL-KDGTEVGVKRMELGSV-TEQGIAQFESEITVLTK----------------------- 472 (631)
Q Consensus 418 ~~f~~~~~iG~G~fg~Vyk~~~-~~g~~vAvK~l~~~~~-~~~~~~~~~~Ei~~l~~----------------------- 472 (631)
..|...+.||+|+|+.||+++. ..|..||+|++.+..+ ....++...+||++.+.
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivL 97 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVL 97 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEE
Confidence 5789999999999999999997 7799999999976443 34567789999999876
Q ss_pred -----CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCC
Q 042825 473 -----GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENG 523 (631)
Q Consensus 473 -----gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~ 523 (631)
|+|.+++. ...+++..+...+..||+.| .++||+|||||..+..++
T Consensus 98 ELC~~~sL~el~K-----rrk~ltEpEary~l~QIv~GlkYLH~~~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~~ 172 (592)
T KOG0575|consen 98 ELCHRGSLMELLK-----RRKPLTEPEARYFLRQIVEGLKYLHSLGIIHRDLKLGNLFLNENMNVKIGDFGLATQLEYDG 172 (592)
T ss_pred EecCCccHHHHHH-----hcCCCCcHHHHHHHHHHHHHHHHHHhcCceecccchhheeecCcCcEEecccceeeeecCcc
Confidence 55555552 34567777777777777776 578999999999885332
Q ss_pred ccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHH-HhHhhhcCChhHHHHH
Q 042825 524 KHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLAT-WFQKMHKNHDTFQMAI 602 (631)
Q Consensus 524 ~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~-~~~~~~~~~~~l~~~i 602 (631)
....+.|||+.|+|||++....++..+||||+|||||-|++|++||+...-.+.+. .+.. -.......+.+.+++|
T Consensus 173 --Erk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~vkety~-~Ik~~~Y~~P~~ls~~A~dLI 249 (592)
T KOG0575|consen 173 --ERKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKTVKETYN-KIKLNEYSMPSHLSAEAKDLI 249 (592)
T ss_pred --cccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccchHHHHHH-HHHhcCcccccccCHHHHHHH
Confidence 23456899999999999999999999999999999999999999998643322111 1111 1111123457889999
Q ss_pred HhhcCCChhhHHhHHHHHH
Q 042825 603 DKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 603 d~~L~~d~~~r~~~~~vl~ 621 (631)
.++|+.+|.+||++.++++
T Consensus 250 ~~lL~~~P~~Rpsl~~vL~ 268 (592)
T KOG0575|consen 250 RKLLRPNPSERPSLDEVLD 268 (592)
T ss_pred HHHhcCCcccCCCHHHHhc
Confidence 9999999999999999875
|
|
| >KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.94 E-value=5.4e-27 Score=224.04 Aligned_cols=202 Identities=21% Similarity=0.353 Sum_probs=151.3
Q ss_pred CCcccceeecCCCceEEEEEE-ecCCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc------------------------
Q 042825 418 NNFSEENRLGRGGVGTVYKGE-LKDGTEVGVKRMELGSVTEQGIAQFESEITVLTK------------------------ 472 (631)
Q Consensus 418 ~~f~~~~~iG~G~fg~Vyk~~-~~~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~------------------------ 472 (631)
.+|.+.+.||+|+||+|||++ +.+|..||.|.+.-+.++.+.+++...|+.+|+.
T Consensus 19 ~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlniv 98 (375)
T KOG0591|consen 19 ADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNIV 98 (375)
T ss_pred HHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHHH
Confidence 467788999999999999998 5689999999999887888888899999998876
Q ss_pred ------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC----------------------------CCcEEEeeccccc
Q 042825 473 ------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG----------------------------DDMRVADFGLVRL 518 (631)
Q Consensus 473 ------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g----------------------------~~~kl~DFGla~~ 518 (631)
|+|.+.+..+..+ ..-+......++..+.+++ +.+|++|||++|.
T Consensus 99 mE~c~~GDLsqmIk~~K~q-kr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~ 177 (375)
T KOG0591|consen 99 MELCDAGDLSQMIKHFKKQ-KRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFGLGRF 177 (375)
T ss_pred HHhhcccCHHHHHHHHHhc-cccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccchhHhH
Confidence 7777777654333 3334444444444444433 6689999999999
Q ss_pred cCCCCccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHhHhhh---cCC
Q 042825 519 VPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQKMH---KNH 595 (631)
Q Consensus 519 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~~~~~---~~~ 595 (631)
+. .+.......+||+.||+||.+....|+.|+||||+||++|||..-++||.+..-.+ ....+...-.... .-+
T Consensus 178 l~--s~~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~n~~~-L~~KI~qgd~~~~p~~~YS 254 (375)
T KOG0591|consen 178 LS--SKTTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGDNLLS-LCKKIEQGDYPPLPDEHYS 254 (375)
T ss_pred hc--chhHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccccHHH-HHHHHHcCCCCCCcHHHhh
Confidence 84 33445677899999999999999999999999999999999999999999763211 1112222111111 125
Q ss_pred hhHHHHHHhhcCCChhhHHh-HHHHHHHH
Q 042825 596 DTFQMAIDKTIQLDEENLAN-VSTVAELG 623 (631)
Q Consensus 596 ~~l~~~id~~L~~d~~~r~~-~~~vl~la 623 (631)
+++.++|.-|+.+|++.||+ ..-+.+++
T Consensus 255 ~~l~~li~~ci~vd~~~RP~t~~~v~di~ 283 (375)
T KOG0591|consen 255 TDLRELINMCIAVDPEQRPDTVPYVQDIQ 283 (375)
T ss_pred hHHHHHHHHHccCCcccCCCcchHHHHHH
Confidence 68999999999999999997 34344443
|
|
| >KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=4e-26 Score=227.33 Aligned_cols=198 Identities=24% Similarity=0.321 Sum_probs=150.3
Q ss_pred CcCHHHHHhhcCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc-------------
Q 042825 407 AIPIQVLRNATNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK------------- 472 (631)
Q Consensus 407 ~~~~~~l~~~t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~------------- 472 (631)
.++.+||++ .+.||+|..|+|||++++ +++.+|.|++.. .......++..+|++++.+
T Consensus 75 ~i~~~dle~-------~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~-~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF 146 (364)
T KOG0581|consen 75 GISLSDLER-------LGVLGSGNGGTVYKVRHKPTGKIYALKVILL-NIDPALQKQILRELEILRSCQSPYIVGFYGAF 146 (364)
T ss_pred ccCHHHhhh-------hhhcccCCCcEEEEEEEcCCCeEEEEEeecc-cCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEE
Confidence 456666654 489999999999999987 589999999954 3455677889999999877
Q ss_pred ----------------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC-------------------------CCcEEE
Q 042825 473 ----------------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG-------------------------DDMRVA 511 (631)
Q Consensus 473 ----------------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g-------------------------~~~kl~ 511 (631)
|+|+..+... ..+.....-+|+.++.+| +++|||
T Consensus 147 ~~~~~~isI~mEYMDgGSLd~~~k~~-----g~i~E~~L~~ia~~VL~GL~YLh~~~~IIHRDIKPsNlLvNskGeVKic 221 (364)
T KOG0581|consen 147 YSNGEEISICMEYMDGGSLDDILKRV-----GRIPEPVLGKIARAVLRGLSYLHEERKIIHRDIKPSNLLVNSKGEVKIC 221 (364)
T ss_pred EeCCceEEeehhhcCCCCHHHHHhhc-----CCCCHHHHHHHHHHHHHHHHHHhhccCeeeccCCHHHeeeccCCCEEec
Confidence 6666665421 234555555666666665 789999
Q ss_pred eeccccccCCCCccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHhHh-
Q 042825 512 DFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQK- 590 (631)
Q Consensus 512 DFGla~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~~~- 590 (631)
|||.++.+.. ....+++||..|||||.+.+..|+.++||||||+.++|+.+|+.|+............+..+.-.
T Consensus 222 DFGVS~~lvn----S~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~~Iv~~ 297 (364)
T KOG0581|consen 222 DFGVSGILVN----SIANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELLCAIVDE 297 (364)
T ss_pred cccccHHhhh----hhcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHHHHHHhcC
Confidence 9999998742 25678899999999999999999999999999999999999999997642221122233332211
Q ss_pred ---hhc---CChhHHHHHHhhcCCChhhHHhHHHHHH
Q 042825 591 ---MHK---NHDTFQMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 591 ---~~~---~~~~l~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
..+ -+++++++|+.||++||.+|+++.++++
T Consensus 298 ppP~lP~~~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~ 334 (364)
T KOG0581|consen 298 PPPRLPEGEFSPEFRSFVSCCLRKDPSERPSAKQLLQ 334 (364)
T ss_pred CCCCCCcccCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 111 2468999999999999999999999774
|
|
| >KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=7.6e-26 Score=227.13 Aligned_cols=193 Identities=23% Similarity=0.377 Sum_probs=145.7
Q ss_pred hcCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc----------------------
Q 042825 416 ATNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK---------------------- 472 (631)
Q Consensus 416 ~t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~---------------------- 472 (631)
...+|...+.||+|+||+||+|+++ ++..||||.+.......+.++-...|+.+|++
T Consensus 8 ~~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lV 87 (429)
T KOG0595|consen 8 VVGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLV 87 (429)
T ss_pred ccccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEE
Confidence 4457888888999999999999976 58999999999887777788889999999987
Q ss_pred ------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------------CCcEEEeeccc
Q 042825 473 ------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------------DDMRVADFGLV 516 (631)
Q Consensus 473 ------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------------~~~kl~DFGla 516 (631)
|+|..|++.. ..+.......++.|+|.| -.+||+|||+|
T Consensus 88 MEyC~gGDLs~yi~~~-----~~l~e~t~r~Fm~QLA~alq~L~~~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfA 162 (429)
T KOG0595|consen 88 MEYCNGGDLSDYIRRR-----GRLPEATARHFMQQLASALQFLHENNIIHRDLKPQNILLSTTARNDTSPVLKIADFGFA 162 (429)
T ss_pred EEeCCCCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCcceEEeccCCCCCCCceEEecccchh
Confidence 8999988642 245666666666666655 13689999999
Q ss_pred cccCCCCccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHhHhhhc---
Q 042825 517 RLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQKMHK--- 593 (631)
Q Consensus 517 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~~~~~~--- 593 (631)
|.+.+. ....+.+|++-|||||+++..+|+.|+|+||.|+++|||++|+.||+.....+. .. ..+......+
T Consensus 163 R~L~~~---~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~~eL-~~-~~~k~~~~~~~~~ 237 (429)
T KOG0595|consen 163 RFLQPG---SMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAETPKEL-LL-YIKKGNEIVPVLP 237 (429)
T ss_pred hhCCch---hHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccccCHHHH-HH-HHhccccccCchh
Confidence 998632 345678999999999999999999999999999999999999999996544321 11 1111111111
Q ss_pred --CChhHHHHHHhhcCCChhhHHhHHH
Q 042825 594 --NHDTFQMAIDKTIQLDEENLANVST 618 (631)
Q Consensus 594 --~~~~l~~~id~~L~~d~~~r~~~~~ 618 (631)
.+.++.+++-+.++.++.+|....+
T Consensus 238 ~~~s~~~~~Ll~~ll~~~~~~~~~~~~ 264 (429)
T KOG0595|consen 238 AELSNPLRELLISLLQRNPKDRISFED 264 (429)
T ss_pred hhccCchhhhhhHHHhcCccccCchHH
Confidence 1245567777777777766655544
|
|
| >KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.6e-26 Score=230.10 Aligned_cols=196 Identities=21% Similarity=0.292 Sum_probs=141.3
Q ss_pred cCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCH-HHHHHHHHHHHHHhc----------------------
Q 042825 417 TNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTE-QGIAQFESEITVLTK---------------------- 472 (631)
Q Consensus 417 t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~-~~~~~~~~Ei~~l~~---------------------- 472 (631)
.++|+..++||+|+||+||.++.+ +++.+|+|+|++..+.+ ...+...+|..++.+
T Consensus 24 ~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLylV 103 (357)
T KOG0598|consen 24 PDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYLV 103 (357)
T ss_pred hhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEEE
Confidence 468999999999999999999966 49999999998766543 356678888888876
Q ss_pred ------CChhHHhHhh-----------hhcCCCCCCHHHHHHHHHHhhcC--------CCcEEEeeccccccCCCCcccc
Q 042825 473 ------GTLGRHLFNW-----------EEEGLEPLEWNTRLNIALDVARG--------DDMRVADFGLVRLVPENGKHSI 527 (631)
Q Consensus 473 ------gsL~~~L~~~-----------~~~~~~~L~~~~~~~I~~~ia~g--------~~~kl~DFGla~~~~~~~~~~~ 527 (631)
|.|..+|.+. ..+...+|.+.|...|+...++- ++++|+|||+++..-.. ...
T Consensus 104 ld~~~GGeLf~hL~~eg~F~E~~arfYlaEi~lAL~~LH~~gIiyRDlKPENILLd~~GHi~LtDFgL~k~~~~~--~~~ 181 (357)
T KOG0598|consen 104 LDYLNGGELFYHLQREGRFSEDRARFYLAEIVLALGYLHSKGIIYRDLKPENILLDEQGHIKLTDFGLCKEDLKD--GDA 181 (357)
T ss_pred EeccCCccHHHHHHhcCCcchhHHHHHHHHHHHHHHHHHhCCeeeccCCHHHeeecCCCcEEEeccccchhcccC--CCc
Confidence 7888877531 11111223333333333333322 78899999999965322 234
Q ss_pred ccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHhHhhhc-CChhHHHHHHhhc
Q 042825 528 LTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQKMHK-NHDTFQMAIDKTI 606 (631)
Q Consensus 528 ~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~~~~~~-~~~~l~~~id~~L 606 (631)
+.+++||+.|||||++.+..|+..+|+||+||++|||++|.+||.+.+........+..-+..... .+.+.++++.+.|
T Consensus 182 t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~~~~~~~I~~~k~~~~p~~ls~~ardll~~LL 261 (357)
T KOG0598|consen 182 TRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDVKKMYDKILKGKLPLPPGYLSEEARDLLKKLL 261 (357)
T ss_pred cccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCccHHHHHHHHhcCcCCCCCccCCHHHHHHHHHHh
Confidence 456899999999999999999999999999999999999999998765432222112211111112 3468899999999
Q ss_pred CCChhhHH
Q 042825 607 QLDEENLA 614 (631)
Q Consensus 607 ~~d~~~r~ 614 (631)
..||++|.
T Consensus 262 ~rdp~~RL 269 (357)
T KOG0598|consen 262 KRDPRQRL 269 (357)
T ss_pred ccCHHHhc
Confidence 99999995
|
|
| >KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=99.93 E-value=7.8e-26 Score=246.31 Aligned_cols=199 Identities=21% Similarity=0.327 Sum_probs=155.3
Q ss_pred CcccceeecCCCceEEEEEEec------CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc--------------------
Q 042825 419 NFSEENRLGRGGVGTVYKGELK------DGTEVGVKRMELGSVTEQGIAQFESEITVLTK-------------------- 472 (631)
Q Consensus 419 ~f~~~~~iG~G~fg~Vyk~~~~------~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~-------------------- 472 (631)
+....+.||+|+||+||+|+.. +.+.||||.++... ..+.+++|++|++++.+
T Consensus 487 ~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a-~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~P~~ 565 (774)
T KOG1026|consen 487 DIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKA-ENQARQDFRREAELLAELQHPNIVRLLGVCREGDPLC 565 (774)
T ss_pred heeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccc-cHHHHHHHHHHHHHHHhccCCCeEEEEEEEccCCeeE
Confidence 3445688999999999999854 35689999998754 44578999999999987
Q ss_pred --------CChhHHhHhhhhcC---------CCCCCHHHHHHHHHHhhcC------------------------CCcEEE
Q 042825 473 --------GTLGRHLFNWEEEG---------LEPLEWNTRLNIALDVARG------------------------DDMRVA 511 (631)
Q Consensus 473 --------gsL~~~L~~~~~~~---------~~~L~~~~~~~I~~~ia~g------------------------~~~kl~ 511 (631)
|+|+++|....... ..+|+-.+.+.||.|||.| ..+||+
T Consensus 566 MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~FVHRDLATRNCLVge~l~VKIs 645 (774)
T KOG1026|consen 566 MVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHHFVHRDLATRNCLVGENLVVKIS 645 (774)
T ss_pred EEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCcccccchhhhhceeccceEEEec
Confidence 99999997532211 2348999999999999998 357999
Q ss_pred eeccccccCCCCccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChHHHHHHHHHhHh
Q 042825 512 DFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT-GRKVVDATHSDPEYIIHLATWFQK 590 (631)
Q Consensus 512 DFGla~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~Ellt-G~~P~~~~~~~~~~~~~l~~~~~~ 590 (631)
|||++|..+..+.+.......-+++||+||.+..++||+++|||||||||||++| |+.|+.+...++ ....+.. ..
T Consensus 646 DfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~E-VIe~i~~--g~ 722 (774)
T KOG1026|consen 646 DFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQE-VIECIRA--GQ 722 (774)
T ss_pred ccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccchHH-HHHHHHc--CC
Confidence 9999998875555544444556889999999999999999999999999999999 999998875543 2222221 11
Q ss_pred hhc----CChhHHHHHHhhcCCChhhHHhHHHHHH
Q 042825 591 MHK----NHDTFQMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 591 ~~~----~~~~l~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
.++ -+.++.++...|+...|.+||++.++-.
T Consensus 723 lL~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~ 757 (774)
T KOG1026|consen 723 LLSCPENCPTEVYSLMLECWNENPKRRPSFKEIHS 757 (774)
T ss_pred cccCCCCCCHHHHHHHHHHhhcCcccCCCHHHHHH
Confidence 122 2357889999999999999999998754
|
|
| >KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=6.3e-26 Score=237.17 Aligned_cols=203 Identities=25% Similarity=0.416 Sum_probs=150.8
Q ss_pred HHHHhhcCCcccceeecCCCceEEEEEEecCCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc------------------
Q 042825 411 QVLRNATNNFSEENRLGRGGVGTVYKGELKDGTEVGVKRMELGSVTEQGIAQFESEITVLTK------------------ 472 (631)
Q Consensus 411 ~~l~~~t~~f~~~~~iG~G~fg~Vyk~~~~~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~------------------ 472 (631)
++++..-+.+...+.||+|+||+||||+|. ..||||.++....++...+.|+.|+.++++
T Consensus 385 ~~WeIp~~ev~l~~rIGsGsFGtV~Rg~wh--GdVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p~~ 462 (678)
T KOG0193|consen 385 EEWEIPPEEVLLGERIGSGSFGTVYRGRWH--GDVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNPPL 462 (678)
T ss_pred cccccCHHHhhccceeccccccceeecccc--cceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCCce
Confidence 334444445556789999999999999984 469999999988888899999999999987
Q ss_pred ---------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeecccccc
Q 042825 473 ---------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLV 519 (631)
Q Consensus 473 ---------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~ 519 (631)
.+|+.|||... ..++..+-+.||.++|+| ..+||+|||++...
T Consensus 463 AIiTqwCeGsSLY~hlHv~e----tkfdm~~~idIAqQiaqGM~YLHAK~IIHrDLKSnNIFl~~~~kVkIgDFGLatvk 538 (678)
T KOG0193|consen 463 AIITQWCEGSSLYTHLHVQE----TKFDMNTTIDIAQQIAQGMDYLHAKNIIHRDLKSNNIFLHEDLKVKIGDFGLATVK 538 (678)
T ss_pred eeeehhccCchhhhhccchh----hhhhHHHHHHHHHHHHHhhhhhhhhhhhhhhccccceEEccCCcEEEecccceeee
Confidence 57888887532 457777777888888877 45789999998653
Q ss_pred CCCCccccccccccCcccccccccccC---CCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHH-------HHhH
Q 042825 520 PENGKHSILTKVAGTFGYLAPEYIVTG---RITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLA-------TWFQ 589 (631)
Q Consensus 520 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~---~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~-------~~~~ 589 (631)
..-..........|.+.|||||+++.. .|+..+||||||||+|||+||..||.....+ ...-++ +-..
T Consensus 539 ~~w~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~d--qIifmVGrG~l~pd~s~ 616 (678)
T KOG0193|consen 539 TRWSGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNRD--QIIFMVGRGYLMPDLSK 616 (678)
T ss_pred eeeccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCChh--heEEEecccccCccchh
Confidence 211111223445688999999999744 5999999999999999999999999843322 111111 1111
Q ss_pred hhhcCChhHHHHHHhhcCCChhhHHhHHHHHH
Q 042825 590 KMHKNHDTFQMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 590 ~~~~~~~~l~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
.......++++++..|+..++++||.+.+++.
T Consensus 617 ~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~ 648 (678)
T KOG0193|consen 617 IRSNCPKAMKRLLSDCWKFDREERPLFPQLLS 648 (678)
T ss_pred hhccCHHHHHHHHHHHHhcCcccCccHHHHHH
Confidence 11222347899999999999999999998876
|
|
| >KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.93 E-value=6.3e-26 Score=234.44 Aligned_cols=192 Identities=24% Similarity=0.362 Sum_probs=148.4
Q ss_pred CCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc------------------------
Q 042825 418 NNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK------------------------ 472 (631)
Q Consensus 418 ~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~------------------------ 472 (631)
++|...+.||+|+||.||||+.+ +.+.||+|.+.+....+++.+...+|++++.+
T Consensus 2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVte 81 (808)
T KOG0597|consen 2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVTE 81 (808)
T ss_pred cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEeh
Confidence 57888899999999999999966 58899999998877677788889999999876
Q ss_pred ---CChhHHhHhhhhcCCCCCCHHHHHHHHHHhh------------------------cCCCcEEEeeccccccCCCCcc
Q 042825 473 ---GTLGRHLFNWEEEGLEPLEWNTRLNIALDVA------------------------RGDDMRVADFGLVRLVPENGKH 525 (631)
Q Consensus 473 ---gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia------------------------~g~~~kl~DFGla~~~~~~~~~ 525 (631)
|+|+.+|.+ ...|.......|+.+.. .|+.+|++|||+||.+. ...
T Consensus 82 ~a~g~L~~il~~-----d~~lpEe~v~~~a~~LVsaL~yLhs~rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~--~~t 154 (808)
T KOG0597|consen 82 YAVGDLFTILEQ-----DGKLPEEQVRAIAYDLVSALYYLHSNRILHRDMKPQNILLEKGGTLKLCDFGLARAMS--TNT 154 (808)
T ss_pred hhhhhHHHHHHh-----ccCCCHHHHHHHHHHHHHHHHHHHhcCcccccCCcceeeecCCCceeechhhhhhhcc--cCc
Confidence 666666632 12344444444444433 33778999999999885 344
Q ss_pred ccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHH-----hHhhhcCChhHHH
Q 042825 526 SILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATW-----FQKMHKNHDTFQM 600 (631)
Q Consensus 526 ~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~-----~~~~~~~~~~l~~ 600 (631)
...+.+.||+.|||||...+..|+..+|.||+||++||+++|++||.... ...+++- ++.....+..+..
T Consensus 155 ~vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~s-----i~~Lv~~I~~d~v~~p~~~S~~f~n 229 (808)
T KOG0597|consen 155 SVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYARS-----ITQLVKSILKDPVKPPSTASSSFVN 229 (808)
T ss_pred eeeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHHH-----HHHHHHHHhcCCCCCcccccHHHHH
Confidence 56788999999999999999999999999999999999999999997431 2222221 2222233568899
Q ss_pred HHHhhcCCChhhHHhHHHHHH
Q 042825 601 AIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 601 ~id~~L~~d~~~r~~~~~vl~ 621 (631)
+++..|.+||..|.+-.+++.
T Consensus 230 fl~gLL~kdP~~RltW~~Ll~ 250 (808)
T KOG0597|consen 230 FLQGLLIKDPAQRLTWTDLLG 250 (808)
T ss_pred HHHHHhhcChhhcccHHHHhc
Confidence 999999999999988776553
|
|
| >KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.1e-24 Score=226.77 Aligned_cols=194 Identities=26% Similarity=0.358 Sum_probs=151.0
Q ss_pred cceeecCCCceEEEEEEecCCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc----------------------------C
Q 042825 422 EENRLGRGGVGTVYKGELKDGTEVGVKRMELGSVTEQGIAQFESEITVLTK----------------------------G 473 (631)
Q Consensus 422 ~~~~iG~G~fg~Vyk~~~~~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~----------------------------g 473 (631)
..+.||+|.||+||.|.++....||||.++...+. .++|.+|+++|++ |
T Consensus 210 l~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~~m~---~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyIVtE~m~~G 286 (468)
T KOG0197|consen 210 LIRELGSGQFGEVWLGKWNGSTKVAVKTIKEGSMS---PEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYIVTEYMPKG 286 (468)
T ss_pred HHHHhcCCccceEEEEEEcCCCcccceEEeccccC---hhHHHHHHHHHHhCcccCeEEEEEEEecCCceEEEEEecccC
Confidence 45899999999999999988789999999887554 3678999999987 8
Q ss_pred ChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCCcccccc
Q 042825 474 TLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENGKHSILT 529 (631)
Q Consensus 474 sL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~~~~~~~ 529 (631)
+|.++|.. .....+.-.+.+.++.|||.| ..+||+|||+||... ++......
T Consensus 287 sLl~yLr~---~~~~~l~~~~Ll~~a~qIaeGM~YLes~~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~-d~~Y~~~~ 362 (468)
T KOG0197|consen 287 SLLDYLRT---REGGLLNLPQLLDFAAQIAEGMAYLESKNYIHRDLAARNILVDEDLVVKISDFGLARLIG-DDEYTASE 362 (468)
T ss_pred cHHHHhhh---cCCCccchHHHHHHHHHHHHHHHHHHhCCccchhhhhhheeeccCceEEEcccccccccC-CCceeecC
Confidence 89998864 345678888999999999998 346999999999653 33333444
Q ss_pred ccccCcccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChHHHHHHHHHhHh--hhcCChhHHHHHHhhc
Q 042825 530 KVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT-GRKVVDATHSDPEYIIHLATWFQK--MHKNHDTFQMAIDKTI 606 (631)
Q Consensus 530 ~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~Ellt-G~~P~~~~~~~~~~~~~l~~~~~~--~~~~~~~l~~~id~~L 606 (631)
...-++.|.|||.+..++|+.|+|||||||+||||+| |+.|+..+...+ ....+..-.+- +..-++++-++...|+
T Consensus 363 ~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~e-v~~~le~GyRlp~P~~CP~~vY~lM~~CW 441 (468)
T KOG0197|consen 363 GGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNEE-VLELLERGYRLPRPEGCPDEVYELMKSCW 441 (468)
T ss_pred CCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCHHH-HHHHHhccCcCCCCCCCCHHHHHHHHHHh
Confidence 4556789999999999999999999999999999999 999988764321 22222221111 1112467889999999
Q ss_pred CCChhhHHhHHHHHHHH
Q 042825 607 QLDEENLANVSTVAELG 623 (631)
Q Consensus 607 ~~d~~~r~~~~~vl~la 623 (631)
..+|++||+...+....
T Consensus 442 ~~~P~~RPtF~~L~~~l 458 (468)
T KOG0197|consen 442 HEDPEDRPTFETLREVL 458 (468)
T ss_pred hCCcccCCCHHHHHHHH
Confidence 99999999998766543
|
|
| >KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.4e-24 Score=209.65 Aligned_cols=157 Identities=21% Similarity=0.302 Sum_probs=115.1
Q ss_pred CCcccceeecCCCceEEEEEEecC-CcEEEEEEEecCCCCHHHHHHHHHHHHHHhc---CChhHH---------------
Q 042825 418 NNFSEENRLGRGGVGTVYKGELKD-GTEVGVKRMELGSVTEQGIAQFESEITVLTK---GTLGRH--------------- 478 (631)
Q Consensus 418 ~~f~~~~~iG~G~fg~Vyk~~~~~-g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~---gsL~~~--------------- 478 (631)
+.|+...++|+|+||+||||+.++ |+.||||++.....++...+-.++||++++. .+|-..
T Consensus 2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE 81 (396)
T KOG0593|consen 2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFE 81 (396)
T ss_pred cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEee
Confidence 467888999999999999999875 9999999997765555555667899998876 122111
Q ss_pred ---------------------hHhhhhcCCCCCCHHHHHHHHHHhhcC--------CCcEEEeeccccccCCCCcccccc
Q 042825 479 ---------------------LFNWEEEGLEPLEWNTRLNIALDVARG--------DDMRVADFGLVRLVPENGKHSILT 529 (631)
Q Consensus 479 ---------------------L~~~~~~~~~~L~~~~~~~I~~~ia~g--------~~~kl~DFGla~~~~~~~~~~~~~ 529 (631)
+..+..+....+.|.|..++++...+. +.+|+||||+||.+... ....+
T Consensus 82 ~~dhTvL~eLe~~p~G~~~~~vk~~l~Q~l~ai~~cHk~n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~p--gd~YT 159 (396)
T KOG0593|consen 82 YCDHTVLHELERYPNGVPSELVKKYLYQLLKAIHFCHKNNCIHRDIKPENILITQNGVVKLCDFGFARTLSAP--GDNYT 159 (396)
T ss_pred ecchHHHHHHHhccCCCCHHHHHHHHHHHHHHhhhhhhcCeecccCChhheEEecCCcEEeccchhhHhhcCC--cchhh
Confidence 111111222334444444444332222 66899999999998632 23567
Q ss_pred ccccCccccccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCC
Q 042825 530 KVAGTFGYLAPEYIVT-GRITAKVDVYSFGMILMDLITGRKVVDATHS 576 (631)
Q Consensus 530 ~~~gt~~Y~aPE~~~~-~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~ 576 (631)
..+.|.+|.|||.+.+ .+|...+||||+||++.||++|.+-|.+..+
T Consensus 160 DYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SD 207 (396)
T KOG0593|consen 160 DYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSD 207 (396)
T ss_pred hhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcch
Confidence 7899999999999988 5799999999999999999999999987644
|
|
| >KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.91 E-value=1e-24 Score=233.12 Aligned_cols=195 Identities=21% Similarity=0.314 Sum_probs=143.4
Q ss_pred cccceeecCCCceEEEEEEecC----CcEEEEEEEecCCCCHHHHHHHHHHHHHHhc-----------------------
Q 042825 420 FSEENRLGRGGVGTVYKGELKD----GTEVGVKRMELGSVTEQGIAQFESEITVLTK----------------------- 472 (631)
Q Consensus 420 f~~~~~iG~G~fg~Vyk~~~~~----g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~----------------------- 472 (631)
..+.++||.|.||+||+|+++- ...||||.++... +++++.+|+.|..+|.+
T Consensus 631 i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~Gy-tekqrrdFL~EAsIMGQFdHPNIIrLEGVVTks~PvMIiT 709 (996)
T KOG0196|consen 631 VKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGY-TEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSKPVMIIT 709 (996)
T ss_pred eEEEEEEecccccceecccccCCCCcceeEEEeeeccCc-cHHHHhhhhhhhhhcccCCCCcEEEEEEEEecCceeEEEh
Confidence 3567899999999999999873 4579999998765 56788999999988876
Q ss_pred -----CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCC
Q 042825 473 -----GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENG 523 (631)
Q Consensus 473 -----gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~ 523 (631)
|+|..+|... ...++|.+...+..+||.| ..+||+|||++|.+.++.
T Consensus 710 EyMENGsLDsFLR~~----DGqftviQLVgMLrGIAsGMkYLsdm~YVHRDLAARNILVNsnLvCKVsDFGLSRvledd~ 785 (996)
T KOG0196|consen 710 EYMENGSLDSFLRQN----DGQFTVIQLVGMLRGIASGMKYLSDMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDP 785 (996)
T ss_pred hhhhCCcHHHHHhhc----CCceEeehHHHHHHHHHHHhHHHhhcCchhhhhhhhheeeccceEEEeccccceeecccCC
Confidence 8999998642 2348888888888999988 225899999999885433
Q ss_pred cccccccc--ccCcccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChHHHHHHHHHhHhhhc--CChhH
Q 042825 524 KHSILTKV--AGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT-GRKVVDATHSDPEYIIHLATWFQKMHK--NHDTF 598 (631)
Q Consensus 524 ~~~~~~~~--~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~Ellt-G~~P~~~~~~~~~~~~~l~~~~~~~~~--~~~~l 598 (631)
....++. .-+++|.|||.+..+++|.++|||||||||||+++ |++||.++...+ ....+.+-.+-..+ -...+
T Consensus 786 -~~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSNQd-VIkaIe~gyRLPpPmDCP~aL 863 (996)
T KOG0196|consen 786 -EAAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQD-VIKAIEQGYRLPPPMDCPAAL 863 (996)
T ss_pred -CccccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccccchHH-HHHHHHhccCCCCCCCCcHHH
Confidence 2222333 33679999999999999999999999999999988 999998765432 22223322221111 12355
Q ss_pred HHHHHhhcCCChhhHHhHHHHHH
Q 042825 599 QMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 599 ~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
.++.-.++++|-..||...+++.
T Consensus 864 ~qLMldCWqkdR~~RP~F~qiV~ 886 (996)
T KOG0196|consen 864 YQLMLDCWQKDRNRRPKFAQIVS 886 (996)
T ss_pred HHHHHHHHHHHhhcCCCHHHHHH
Confidence 66666666666667777666554
|
|
| >KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.7e-24 Score=219.13 Aligned_cols=201 Identities=20% Similarity=0.278 Sum_probs=137.9
Q ss_pred CCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc------------------------
Q 042825 418 NNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK------------------------ 472 (631)
Q Consensus 418 ~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~------------------------ 472 (631)
..|...+.||+|+||.||||... .++.||+|++..+... ...++.++|+.++..
T Consensus 13 ~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~-deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiMe 91 (467)
T KOG0201|consen 13 LLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAE-DEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIME 91 (467)
T ss_pred cccccchhccccccceeeeeeeccccceEEEEEechhhcc-hhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHHH
Confidence 35667789999999999999954 5899999999876533 356778888888766
Q ss_pred ----CChhHHhHhh-----------hhcCCCCCCHHHHHHHHHHhhcC--------CCcEEEeeccccccCCCCcccccc
Q 042825 473 ----GTLGRHLFNW-----------EEEGLEPLEWNTRLNIALDVARG--------DDMRVADFGLVRLVPENGKHSILT 529 (631)
Q Consensus 473 ----gsL~~~L~~~-----------~~~~~~~L~~~~~~~I~~~ia~g--------~~~kl~DFGla~~~~~~~~~~~~~ 529 (631)
|++.+.|..- .++....+++.|..+.++..-++ +++|++|||++..+.... ....
T Consensus 92 y~~gGsv~~lL~~~~~~~E~~i~~ilre~l~~l~ylH~~~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~--~rr~ 169 (467)
T KOG0201|consen 92 YCGGGSVLDLLKSGNILDEFEIAVILREVLKGLDYLHSEKKIHRDIKAANILLSESGDVKLADFGVAGQLTNTV--KRRK 169 (467)
T ss_pred HhcCcchhhhhccCCCCccceeeeehHHHHHHhhhhhhcceecccccccceeEeccCcEEEEecceeeeeechh--hccc
Confidence 2222222100 00001123333332222221122 678999999998875322 2336
Q ss_pred ccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHhHhhhc--CChhHHHHHHhhcC
Q 042825 530 KVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQKMHK--NHDTFQMAIDKTIQ 607 (631)
Q Consensus 530 ~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~~~~~~--~~~~l~~~id~~L~ 607 (631)
+++||+.|||||++....|+.|+||||+|++.+||.+|.+|+....+.. ....+.+-....+. -+..++|+|..||.
T Consensus 170 tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmr-vlflIpk~~PP~L~~~~S~~~kEFV~~CL~ 248 (467)
T KOG0201|consen 170 TFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMR-VLFLIPKSAPPRLDGDFSPPFKEFVEACLD 248 (467)
T ss_pred cccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcce-EEEeccCCCCCccccccCHHHHHHHHHHhh
Confidence 7899999999999998899999999999999999999999998654421 01111111111111 13569999999999
Q ss_pred CChhhHHhHHHHHHH
Q 042825 608 LDEENLANVSTVAEL 622 (631)
Q Consensus 608 ~d~~~r~~~~~vl~l 622 (631)
.+|+.|+++.++++-
T Consensus 249 k~P~~RpsA~~LLKh 263 (467)
T KOG0201|consen 249 KNPEFRPSAKELLKH 263 (467)
T ss_pred cCcccCcCHHHHhhh
Confidence 999999999998763
|
|
| >KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.2e-23 Score=223.69 Aligned_cols=200 Identities=19% Similarity=0.283 Sum_probs=139.8
Q ss_pred hhcCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCC-CHHHHHHHHHHHHHHhc--------------------
Q 042825 415 NATNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSV-TEQGIAQFESEITVLTK-------------------- 472 (631)
Q Consensus 415 ~~t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~-~~~~~~~~~~Ei~~l~~-------------------- 472 (631)
...++|...++||+|+||+|+.+.++ +++.+|||.++++.+ .+...+..+.|..++.-
T Consensus 365 ~~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l 444 (694)
T KOG0694|consen 365 LTLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEHL 444 (694)
T ss_pred ccccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCeE
Confidence 34578999999999999999999987 488999999988754 34456777777776643
Q ss_pred ---------CChhHHhHh----------hhhcCCCCCCHHHHHHHHHHhhc--------CCCcEEEeeccccccCCCCcc
Q 042825 473 ---------GTLGRHLFN----------WEEEGLEPLEWNTRLNIALDVAR--------GDDMRVADFGLVRLVPENGKH 525 (631)
Q Consensus 473 ---------gsL~~~L~~----------~~~~~~~~L~~~~~~~I~~~ia~--------g~~~kl~DFGla~~~~~~~~~ 525 (631)
|++..+.+. |..+...+|.+.|...|+....+ -+++||+|||++|.-.- ..
T Consensus 445 ~fvmey~~Ggdm~~~~~~~~F~e~rarfyaAev~l~L~fLH~~~IIYRDlKLdNiLLD~eGh~kiADFGlcKe~m~--~g 522 (694)
T KOG0694|consen 445 FFVMEYVAGGDLMHHIHTDVFSEPRARFYAAEVVLGLQFLHENGIIYRDLKLDNLLLDTEGHVKIADFGLCKEGMG--QG 522 (694)
T ss_pred EEEEEecCCCcEEEEEecccccHHHHHHHHHHHHHHHHHHHhcCceeeecchhheEEcccCcEEecccccccccCC--CC
Confidence 332111110 00000112222222222222111 16789999999996531 22
Q ss_pred ccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHhHhhhcCChhHHHHHHhh
Q 042825 526 SILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQKMHKNHDTFQMAIDKT 605 (631)
Q Consensus 526 ~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~id~~ 605 (631)
..+.+++||+.|||||++.+..|+..+|.|||||+||||+.|+.||.+.++++.....+.+.+....-.+.+..++++++
T Consensus 523 ~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee~FdsI~~d~~~yP~~ls~ea~~il~~l 602 (694)
T KOG0694|consen 523 DRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSKEAIAIMRRL 602 (694)
T ss_pred CccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHhcCCCCCCCcccHHHHHHHHHH
Confidence 35678999999999999999999999999999999999999999999876654333333344433333457889999999
Q ss_pred cCCChhhHHhH
Q 042825 606 IQLDEENLANV 616 (631)
Q Consensus 606 L~~d~~~r~~~ 616 (631)
|..+|+.|...
T Consensus 603 l~k~p~kRLG~ 613 (694)
T KOG0694|consen 603 LRKNPEKRLGS 613 (694)
T ss_pred hccCcccccCC
Confidence 99999998655
|
|
| >KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.90 E-value=9.7e-25 Score=218.86 Aligned_cols=204 Identities=21% Similarity=0.291 Sum_probs=142.9
Q ss_pred hcCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHH-----HHHHHHHHHHHHhc-----------------
Q 042825 416 ATNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQ-----GIAQFESEITVLTK----------------- 472 (631)
Q Consensus 416 ~t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~-----~~~~~~~Ei~~l~~----------------- 472 (631)
..+.|...+.||+|+||.|-+|..+ +|+.||||++.+...... ......+|+++|++
T Consensus 170 ~~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~d 249 (475)
T KOG0615|consen 170 FNDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPD 249 (475)
T ss_pred hcceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCC
Confidence 4556778899999999999999854 699999999987654321 12345799999988
Q ss_pred -----------CChhHHhHhh--hh---------cCCCCCCHHHHHHHHHHhhcC-----------CCcEEEeecccccc
Q 042825 473 -----------GTLGRHLFNW--EE---------EGLEPLEWNTRLNIALDVARG-----------DDMRVADFGLVRLV 519 (631)
Q Consensus 473 -----------gsL~~~L~~~--~~---------~~~~~L~~~~~~~I~~~ia~g-----------~~~kl~DFGla~~~ 519 (631)
|+|.+.+... .. +-..++-+.|...|.+...+. ..+||+|||+|+..
T Consensus 250 s~YmVlE~v~GGeLfd~vv~nk~l~ed~~K~~f~Qll~avkYLH~~GI~HRDiKPeNILl~~~~e~~llKItDFGlAK~~ 329 (475)
T KOG0615|consen 250 SSYMVLEYVEGGELFDKVVANKYLREDLGKLLFKQLLTAVKYLHSQGIIHRDIKPENILLSNDAEDCLLKITDFGLAKVS 329 (475)
T ss_pred ceEEEEEEecCccHHHHHHhccccccchhHHHHHHHHHHHHHHHHcCcccccCCcceEEeccCCcceEEEecccchhhcc
Confidence 6676665321 01 111223333333343333332 23689999999987
Q ss_pred CCCCccccccccccCcccccccccccCC---CCchhhHHHHHHHHHHHHcCCCCCCCCCCCh-HHHHHHHHHh----Hhh
Q 042825 520 PENGKHSILTKVAGTFGYLAPEYIVTGR---ITAKVDVYSFGMILMDLITGRKVVDATHSDP-EYIIHLATWF----QKM 591 (631)
Q Consensus 520 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~---~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~-~~~~~l~~~~----~~~ 591 (631)
. ....+.+.|||+.|.|||++.++. +..|+|+||+|||||-++||.+||.+...+. ...+....-. ...
T Consensus 330 g---~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~sl~eQI~~G~y~f~p~~w 406 (475)
T KOG0615|consen 330 G---EGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPSLKEQILKGRYAFGPLQW 406 (475)
T ss_pred c---cceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCccHHHHHhcCcccccChhh
Confidence 4 334577899999999999998765 3448999999999999999999998655443 2222221111 111
Q ss_pred hcCChhHHHHHHhhcCCChhhHHhHHHHHHH
Q 042825 592 HKNHDTFQMAIDKTIQLDEENLANVSTVAEL 622 (631)
Q Consensus 592 ~~~~~~l~~~id~~L~~d~~~r~~~~~vl~l 622 (631)
-+.+++..++|+.+|..||+.|+++.++++-
T Consensus 407 ~~Iseea~dlI~~mL~VdP~~R~s~~eaL~h 437 (475)
T KOG0615|consen 407 DRISEEALDLINWMLVVDPENRPSADEALNH 437 (475)
T ss_pred hhhhHHHHHHHHHhhEeCcccCcCHHHHhcC
Confidence 2335788999999999999999999998764
|
|
| >PTZ00283 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=6.6e-23 Score=225.89 Aligned_cols=208 Identities=18% Similarity=0.274 Sum_probs=151.3
Q ss_pred HHhhcCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc-------------------
Q 042825 413 LRNATNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK------------------- 472 (631)
Q Consensus 413 l~~~t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~------------------- 472 (631)
.....++|...+.||+|+||+||+|+.. +|+.||||++............+.+|+..+.+
T Consensus 27 ~~~~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~ 106 (496)
T PTZ00283 27 AKEQAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPR 106 (496)
T ss_pred ccccCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceeccccc
Confidence 3455679999999999999999999854 69999999998766666666778888877643
Q ss_pred -----------------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEE
Q 042825 473 -----------------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVA 511 (631)
Q Consensus 473 -----------------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~ 511 (631)
|+|.+++.... .....+.......++.+++.| +.+||+
T Consensus 107 ~~~~~~~i~lV~Ey~~~gsL~~~l~~~~-~~~~~l~e~~~~~i~~qll~aL~~lH~~~IiHrDLKP~NILl~~~~~vkL~ 185 (496)
T PTZ00283 107 NPENVLMIALVLDYANAGDLRQEIKSRA-KTNRTFREHEAGLLFIQVLLAVHHVHSKHMIHRDIKSANILLCSNGLVKLG 185 (496)
T ss_pred CcccceEEEEEEeCCCCCcHHHHHHHhh-ccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEeCCCCEEEE
Confidence 45555554321 122456777777777777665 457899
Q ss_pred eeccccccCCCCccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHhHh-
Q 042825 512 DFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQK- 590 (631)
Q Consensus 512 DFGla~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~~~- 590 (631)
|||+++...............||+.|+|||++.+..++.++|||||||++|||++|+.||......+.....+......
T Consensus 186 DFGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~~~~~~~~~~~~~~~~ 265 (496)
T PTZ00283 186 DFGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGENMEEVMHKTLAGRYDPL 265 (496)
T ss_pred ecccCeeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCCC
Confidence 9999987642222223345689999999999999899999999999999999999999998643221111111111111
Q ss_pred hhcCChhHHHHHHhhcCCChhhHHhHHHHHH
Q 042825 591 MHKNHDTFQMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 591 ~~~~~~~l~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
....++++.+++.+++..+|.+|+++.++++
T Consensus 266 ~~~~~~~l~~li~~~L~~dP~~RPs~~ell~ 296 (496)
T PTZ00283 266 PPSISPEMQEIVTALLSSDPKRRPSSSKLLN 296 (496)
T ss_pred CCCCCHHHHHHHHHHcccChhhCcCHHHHHh
Confidence 1123468999999999999999999998875
|
|
| >KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.89 E-value=4.3e-23 Score=232.84 Aligned_cols=199 Identities=27% Similarity=0.374 Sum_probs=151.2
Q ss_pred CCcccceeecCCCceEEEEEEecC--Cc----EEEEEEEecCCCCHHHHHHHHHHHHHHhc-------------------
Q 042825 418 NNFSEENRLGRGGVGTVYKGELKD--GT----EVGVKRMELGSVTEQGIAQFESEITVLTK------------------- 472 (631)
Q Consensus 418 ~~f~~~~~iG~G~fg~Vyk~~~~~--g~----~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~------------------- 472 (631)
+.....+.||+|+||.||+|...+ |. .||||.++... +.+...+|.+|..+|++
T Consensus 692 ~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~-~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~~ 770 (1025)
T KOG1095|consen 692 KNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLS-SEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGPP 770 (1025)
T ss_pred hheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccC-CHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCCc
Confidence 344567899999999999999663 43 49999987643 56678899999999887
Q ss_pred ---------CChhHHhHhhhh--cCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeecccc
Q 042825 473 ---------GTLGRHLFNWEE--EGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVR 517 (631)
Q Consensus 473 ---------gsL~~~L~~~~~--~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~ 517 (631)
|+|..+|.+-.. .....|.....+.|++|||+| ..+||+|||+||
T Consensus 771 ~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~fvHRDLAaRNCLL~~~r~VKIaDFGlAr 850 (1025)
T KOG1095|consen 771 LILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKHFVHRDLAARNCLLDERRVVKIADFGLAR 850 (1025)
T ss_pred EEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCCCcCcchhhhheeecccCcEEEcccchhH
Confidence 888888864211 114578889999999999999 357999999999
Q ss_pred ccCCCCccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChHHHHHHHHHhHh-----h
Q 042825 518 LVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT-GRKVVDATHSDPEYIIHLATWFQK-----M 591 (631)
Q Consensus 518 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~Ellt-G~~P~~~~~~~~~~~~~l~~~~~~-----~ 591 (631)
.+...+.........-+..|||||.+..+.||.|+|||||||+|||++| |..||.+.... ..+..|.+. .
T Consensus 851 Diy~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~----~v~~~~~~ggRL~~P 926 (1025)
T KOG1095|consen 851 DIYDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNF----EVLLDVLEGGRLDPP 926 (1025)
T ss_pred hhhhchheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchH----HHHHHHHhCCccCCC
Confidence 7654433332223345679999999999999999999999999999999 88998765432 122222221 1
Q ss_pred hcCChhHHHHHHhhcCCChhhHHhHHHHHH
Q 042825 592 HKNHDTFQMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 592 ~~~~~~l~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
..-.+.+-+++.+|++.+|++||+...+++
T Consensus 927 ~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~ 956 (1025)
T KOG1095|consen 927 SYCPEKLYQLMLQCWKHDPEDRPSFRTIVE 956 (1025)
T ss_pred CCCChHHHHHHHHHccCChhhCccHHHHHh
Confidence 112467889999999999999999998876
|
|
| >KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.89 E-value=3.8e-23 Score=199.40 Aligned_cols=191 Identities=22% Similarity=0.270 Sum_probs=140.0
Q ss_pred CCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCC-CHHHHHHHHHHHHHHhc-----------------------
Q 042825 418 NNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSV-TEQGIAQFESEITVLTK----------------------- 472 (631)
Q Consensus 418 ~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~-~~~~~~~~~~Ei~~l~~----------------------- 472 (631)
++|+..+.||.|+||.|..++.+ +|..+|+|++..+.. ..++.+...+|..+|+.
T Consensus 44 ~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lymvm 123 (355)
T KOG0616|consen 44 QDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYMVM 123 (355)
T ss_pred hhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEEEEE
Confidence 46778899999999999999977 488999999987653 23455667788888766
Q ss_pred -----CChhHHhHhhhh-----------cCCCCCCHHHHHHHHHHhhc--------CCCcEEEeeccccccCCCCccccc
Q 042825 473 -----GTLGRHLFNWEE-----------EGLEPLEWNTRLNIALDVAR--------GDDMRVADFGLVRLVPENGKHSIL 528 (631)
Q Consensus 473 -----gsL~~~L~~~~~-----------~~~~~L~~~~~~~I~~~ia~--------g~~~kl~DFGla~~~~~~~~~~~~ 528 (631)
|.|..+|+...+ +...+|.+.|...|+....+ .+.+||+|||+|+.+.. .+
T Consensus 124 eyv~GGElFS~Lrk~~rF~e~~arFYAAeivlAleylH~~~iiYRDLKPENiLlD~~G~iKitDFGFAK~v~~-----rT 198 (355)
T KOG0616|consen 124 EYVPGGELFSYLRKSGRFSEPHARFYAAEIVLALEYLHSLDIIYRDLKPENLLLDQNGHIKITDFGFAKRVSG-----RT 198 (355)
T ss_pred eccCCccHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHhcCeeeccCChHHeeeccCCcEEEEeccceEEecC-----cE
Confidence 667777754111 00112222222222222111 17789999999998742 24
Q ss_pred cccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHhHhhhcCChhHHHHHHhhcCC
Q 042825 529 TKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQKMHKNHDTFQMAIDKTIQL 608 (631)
Q Consensus 529 ~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~id~~L~~ 608 (631)
-+.|||+.|+|||.+..+.|..++|.|||||++|||+.|.+||.+......+...+...+.....-+.++++++...|++
T Consensus 199 ~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~~~iY~KI~~~~v~fP~~fs~~~kdLl~~LL~v 278 (355)
T KOG0616|consen 199 WTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNPIQIYEKILEGKVKFPSYFSSDAKDLLKKLLQV 278 (355)
T ss_pred EEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCChHHHHHHHHhCcccCCcccCHHHHHHHHHHHhh
Confidence 56899999999999999999999999999999999999999998776644444444444555555568899999999998
Q ss_pred ChhhH
Q 042825 609 DEENL 613 (631)
Q Consensus 609 d~~~r 613 (631)
|-..|
T Consensus 279 D~t~R 283 (355)
T KOG0616|consen 279 DLTKR 283 (355)
T ss_pred hhHhh
Confidence 88777
|
|
| >cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.6e-22 Score=212.82 Aligned_cols=212 Identities=22% Similarity=0.288 Sum_probs=150.3
Q ss_pred cCCcccceeecCCCceEEEEEEec------CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc------------------
Q 042825 417 TNNFSEENRLGRGGVGTVYKGELK------DGTEVGVKRMELGSVTEQGIAQFESEITVLTK------------------ 472 (631)
Q Consensus 417 t~~f~~~~~iG~G~fg~Vyk~~~~------~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~------------------ 472 (631)
.++|...+.||+|+||.||+|+.. +++.||||++.... .....+.+.+|+.++.+
T Consensus 6 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~ 84 (338)
T cd05102 6 RDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGA-TASEHKALMSELKILIHIGNHLNVVNLLGACTKPN 84 (338)
T ss_pred hhHceeeeEeccCCcceEEEEEEeccCCcccchhhheecccccc-chHHHHHHHHHHHHHHHhccCcceeeEEeEecCCC
Confidence 457888999999999999999742 35689999987542 23345678888887753
Q ss_pred ------------CChhHHhHhhhhc-------------------------------------------------------
Q 042825 473 ------------GTLGRHLFNWEEE------------------------------------------------------- 485 (631)
Q Consensus 473 ------------gsL~~~L~~~~~~------------------------------------------------------- 485 (631)
|+|.+++......
T Consensus 85 ~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (338)
T cd05102 85 GPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETD 164 (338)
T ss_pred CceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhcc
Confidence 5666665431100
Q ss_pred --CCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCCccccccccccCccccc
Q 042825 486 --GLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENGKHSILTKVAGTFGYLA 539 (631)
Q Consensus 486 --~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~Y~a 539 (631)
....+++.....++.++++| +.+||+|||+++...............++..|+|
T Consensus 165 ~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~a 244 (338)
T cd05102 165 DLWKSPLTMEDLICYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLPLKWMA 244 (338)
T ss_pred ccccCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCccceEEEcCCCcEEEeecccccccccCcchhcccCCCCCccccC
Confidence 01347788888888888876 4578999999987642222222233456789999
Q ss_pred ccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChHHHHHHHHHh--HhhhcCChhHHHHHHhhcCCChhhHHhH
Q 042825 540 PEYIVTGRITAKVDVYSFGMILMDLIT-GRKVVDATHSDPEYIIHLATWF--QKMHKNHDTFQMAIDKTIQLDEENLANV 616 (631)
Q Consensus 540 PE~~~~~~~~~k~DVwS~GvvL~Ellt-G~~P~~~~~~~~~~~~~l~~~~--~~~~~~~~~l~~~id~~L~~d~~~r~~~ 616 (631)
||++.+..++.++|||||||++|||++ |+.||.+....+.....+..-. ......++++.+++.+|+..||.+||++
T Consensus 245 PE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~ 324 (338)
T cd05102 245 PESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEEFCQRLKDGTRMRAPENATPEIYRIMLACWQGDPKERPTF 324 (338)
T ss_pred cHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHccCChhhCcCH
Confidence 999998899999999999999999997 9999986544332222221110 1111224678999999999999999999
Q ss_pred HHHHHHHHhhhcc
Q 042825 617 STVAELGDHCCAN 629 (631)
Q Consensus 617 ~~vl~lal~C~~~ 629 (631)
.++++..-.+.+.
T Consensus 325 ~el~~~l~~~~~~ 337 (338)
T cd05102 325 SALVEILGDLLQE 337 (338)
T ss_pred HHHHHHHHHHHhc
Confidence 9998876665543
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V |
| >KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.89 E-value=5.1e-22 Score=202.54 Aligned_cols=188 Identities=24% Similarity=0.331 Sum_probs=131.6
Q ss_pred CcccceeecCCCceEEEEEEecCCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc--------------------------
Q 042825 419 NFSEENRLGRGGVGTVYKGELKDGTEVGVKRMELGSVTEQGIAQFESEITVLTK-------------------------- 472 (631)
Q Consensus 419 ~f~~~~~iG~G~fg~Vyk~~~~~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~-------------------------- 472 (631)
..+..++||+|.||.||||.+. ++.||||++.. ++.+.|.+|-++..-
T Consensus 211 pl~l~eli~~Grfg~V~KaqL~-~~~VAVKifp~-----~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eyw 284 (534)
T KOG3653|consen 211 PLQLLELIGRGRFGCVWKAQLD-NRLVAVKIFPE-----QEKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYW 284 (534)
T ss_pred chhhHHHhhcCccceeehhhcc-CceeEEEecCH-----HHHHHHHhHHHHHhccCccchhHHHhhchhccCCcccccee
Confidence 4456689999999999999996 59999999854 456778777666543
Q ss_pred --------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC---------------------------------CCcEEE
Q 042825 473 --------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG---------------------------------DDMRVA 511 (631)
Q Consensus 473 --------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g---------------------------------~~~kl~ 511 (631)
|+|.++|.. ..++|....+|+..+|+| ....|+
T Consensus 285 LVt~fh~kGsL~dyL~~------ntisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIa 358 (534)
T KOG3653|consen 285 LVTEFHPKGSLCDYLKA------NTISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIA 358 (534)
T ss_pred EEeeeccCCcHHHHHHh------ccccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEee
Confidence 778777753 468999999999999988 233599
Q ss_pred eeccccccCCCCccccccccccCcccccccccccCC-CC-----chhhHHHHHHHHHHHHcCCCCCCC-CC---------
Q 042825 512 DFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGR-IT-----AKVDVYSFGMILMDLITGRKVVDA-TH--------- 575 (631)
Q Consensus 512 DFGla~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~~-----~k~DVwS~GvvL~ElltG~~P~~~-~~--------- 575 (631)
|||+|..+.++.........+||.+|||||++.+.. +. .+.||||+|.|||||+++..-++. ..
T Consensus 359 DFGLAl~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~ 438 (534)
T KOG3653|consen 359 DFGLALRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEA 438 (534)
T ss_pred ccceeEEecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhH
Confidence 999998886544434445589999999999997653 32 379999999999999998655431 11
Q ss_pred -----CChHHHHHHH--HHhHhhh-------cCChhHHHHHHhhcCCChhhHHhHHH
Q 042825 576 -----SDPEYIIHLA--TWFQKMH-------KNHDTFQMAIDKTIQLDEENLANVST 618 (631)
Q Consensus 576 -----~~~~~~~~l~--~~~~~~~-------~~~~~l~~~id~~L~~d~~~r~~~~~ 618 (631)
+.-+....++ +..+..+ ....-+.+.+..+...|++.|.++.-
T Consensus 439 evG~hPt~e~mq~~VV~kK~RP~~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~C 495 (534)
T KOG3653|consen 439 EVGNHPTLEEMQELVVRKKQRPKIPDAWRKHAGMAVLCETIEECWDHDAEARLTAGC 495 (534)
T ss_pred HhcCCCCHHHHHHHHHhhccCCCChhhhhcCccHHHHHHHHHHHcCCchhhhhhhHH
Confidence 1111111111 1111111 11245678888888888888877643
|
|
| >KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.88 E-value=9.7e-23 Score=212.76 Aligned_cols=193 Identities=21% Similarity=0.374 Sum_probs=142.6
Q ss_pred cCCcccceeecCCCceEEEEEEe-cCCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc-----------------------
Q 042825 417 TNNFSEENRLGRGGVGTVYKGEL-KDGTEVGVKRMELGSVTEQGIAQFESEITVLTK----------------------- 472 (631)
Q Consensus 417 t~~f~~~~~iG~G~fg~Vyk~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~----------------------- 472 (631)
...|.....||+|+.|.||.++. .+++.||||++....... .+-..+|+.+|..
T Consensus 272 ~~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~--keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVM 349 (550)
T KOG0578|consen 272 RSKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPK--KELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVM 349 (550)
T ss_pred hhhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCc--hhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEE
Confidence 34577778999999999999984 468999999998765443 3457889988876
Q ss_pred -----CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCC
Q 042825 473 -----GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENG 523 (631)
Q Consensus 473 -----gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~ 523 (631)
|+|.+.+.. ..++..+...|+.++.+| +.+||+|||++..+....
T Consensus 350 Eym~ggsLTDvVt~------~~~~E~qIA~Icre~l~aL~fLH~~gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~ 423 (550)
T KOG0578|consen 350 EYMEGGSLTDVVTK------TRMTEGQIAAICREILQGLKFLHARGIIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQ 423 (550)
T ss_pred eecCCCchhhhhhc------ccccHHHHHHHHHHHHHHHHHHHhcceeeeccccceeEeccCCcEEEeeeeeeecccccc
Confidence 333332211 224555555555555544 678999999998775332
Q ss_pred ccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHH-----HhHhhhcCChhH
Q 042825 524 KHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLAT-----WFQKMHKNHDTF 598 (631)
Q Consensus 524 ~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~-----~~~~~~~~~~~l 598 (631)
....+.+||+.|||||+.....|++|+||||+|++.+||+-|++||-.... .....+.. ..+.....+..+
T Consensus 424 --~KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~P--lrAlyLIa~ng~P~lk~~~klS~~~ 499 (550)
T KOG0578|consen 424 --SKRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENP--LRALYLIATNGTPKLKNPEKLSPEL 499 (550)
T ss_pred --CccccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCCh--HHHHHHHhhcCCCCcCCccccCHHH
Confidence 245678999999999999999999999999999999999999999975322 22222221 112222335789
Q ss_pred HHHHHhhcCCChhhHHhHHHHHH
Q 042825 599 QMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 599 ~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
++++|+||..|+++|+++.++++
T Consensus 500 kdFL~~cL~~dv~~RasA~eLL~ 522 (550)
T KOG0578|consen 500 KDFLDRCLVVDVEQRASAKELLE 522 (550)
T ss_pred HHHHHHHhhcchhcCCCHHHHhc
Confidence 99999999999999999999875
|
|
| >KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.88 E-value=2.1e-23 Score=214.24 Aligned_cols=201 Identities=21% Similarity=0.338 Sum_probs=142.7
Q ss_pred cCCcccceeecCCCceEEEEEE-ecCCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc------------------CChhH
Q 042825 417 TNNFSEENRLGRGGVGTVYKGE-LKDGTEVGVKRMELGSVTEQGIAQFESEITVLTK------------------GTLGR 477 (631)
Q Consensus 417 t~~f~~~~~iG~G~fg~Vyk~~-~~~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~------------------gsL~~ 477 (631)
.+.|+..+.||+|.||.||||+ ..+|+.||+|+++.+...+....-..+||.+|++ |+++
T Consensus 116 ~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siY- 194 (560)
T KOG0600|consen 116 ADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIY- 194 (560)
T ss_pred hHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEE-
Confidence 3567788999999999999998 4579999999998776555555667899999987 1211
Q ss_pred HhHhhhh--------cCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCCcc
Q 042825 478 HLFNWEE--------EGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENGKH 525 (631)
Q Consensus 478 ~L~~~~~--------~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~~~ 525 (631)
.+++|+. .....++..+...++.|++.| +.+||+|||||++.... ..
T Consensus 195 lVFeYMdhDL~GLl~~p~vkft~~qIKc~mkQLl~Gl~~cH~~gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~~-~~ 273 (560)
T KOG0600|consen 195 LVFEYMDHDLSGLLSSPGVKFTEPQIKCYMKQLLEGLEYCHSRGVLHRDIKGSNILIDNNGVLKIADFGLARFYTPS-GS 273 (560)
T ss_pred EEEecccchhhhhhcCCCcccChHHHHHHHHHHHHHHHHHhhcCeeeccccccceEEcCCCCEEeccccceeeccCC-CC
Confidence 0111111 112234445555555444444 67899999999987533 33
Q ss_pred ccccccccCcccccccccccC-CCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHH-H---------HHhHhhh--
Q 042825 526 SILTKVAGTFGYLAPEYIVTG-RITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHL-A---------TWFQKMH-- 592 (631)
Q Consensus 526 ~~~~~~~gt~~Y~aPE~~~~~-~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l-~---------~~~~~~~-- 592 (631)
...+..+-|.+|.|||.+.+. .|+.++|+||.||||.||++|++.|.+..+- .+.+. . .|....+
T Consensus 274 ~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEv--eQl~kIfklcGSP~e~~W~~~kLP~ 351 (560)
T KOG0600|consen 274 APYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEV--EQLHKIFKLCGSPTEDYWPVSKLPH 351 (560)
T ss_pred cccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHH--HHHHHHHHHhCCCChhccccccCCc
Confidence 446778889999999999876 5999999999999999999999999876443 22221 1 1331111
Q ss_pred -------------------cCChhHHHHHHhhcCCChhhHHhHHHHHH
Q 042825 593 -------------------KNHDTFQMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 593 -------------------~~~~~l~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
..+....++++.+|..||..|.++.++++
T Consensus 352 ~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~ 399 (560)
T KOG0600|consen 352 ATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQ 399 (560)
T ss_pred ccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhc
Confidence 11345678999999999999999988765
|
|
| >cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4 | Back alignment and domain information |
|---|
Probab=99.88 E-value=5.5e-22 Score=203.57 Aligned_cols=196 Identities=22% Similarity=0.375 Sum_probs=142.8
Q ss_pred CcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCC-HHHHHHHHHHHHHHhc------------------------
Q 042825 419 NFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVT-EQGIAQFESEITVLTK------------------------ 472 (631)
Q Consensus 419 ~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~-~~~~~~~~~Ei~~l~~------------------------ 472 (631)
.|+..+.||+|+||+||+|... +|+.||||++...... ......+.+|++++.+
T Consensus 1 ~f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05631 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEE
Confidence 3677899999999999999864 6999999998754322 2233567889988865
Q ss_pred ----CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCCc
Q 042825 473 ----GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENGK 524 (631)
Q Consensus 473 ----gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~~ 524 (631)
|+|..++.. .....+++.....++.+++.| +.+||+|||+++......
T Consensus 81 ~~~~g~L~~~~~~---~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~- 156 (285)
T cd05631 81 IMNGGDLKFHIYN---MGNPGFDEQRAIFYAAELCCGLEDLQRERIVYRDLKPENILLDDRGHIRISDLGLAVQIPEGE- 156 (285)
T ss_pred ecCCCcHHHHHHh---hCCCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCCC-
Confidence 556555532 223457888888888887765 457899999998763221
Q ss_pred cccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHhHh-----hhcCChhHH
Q 042825 525 HSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQK-----MHKNHDTFQ 599 (631)
Q Consensus 525 ~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~~~-----~~~~~~~l~ 599 (631)
......||..|+|||++.+..++.++|||||||++|||++|+.||......... ..+...... ....+.++.
T Consensus 157 --~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~-~~~~~~~~~~~~~~~~~~s~~~~ 233 (285)
T cd05631 157 --TVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKR-EEVDRRVKEDQEEYSEKFSEDAK 233 (285)
T ss_pred --eecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchhH-HHHHHHhhcccccCCccCCHHHH
Confidence 223457999999999999999999999999999999999999999865432111 111111111 112356889
Q ss_pred HHHHhhcCCChhhHHh-----HHHHHH
Q 042825 600 MAIDKTIQLDEENLAN-----VSTVAE 621 (631)
Q Consensus 600 ~~id~~L~~d~~~r~~-----~~~vl~ 621 (631)
+++.++|..||.+|++ +.++++
T Consensus 234 ~li~~~l~~~P~~R~~~~~~~~~~~~~ 260 (285)
T cd05631 234 SICRMLLTKNPKERLGCRGNGAAGVKQ 260 (285)
T ss_pred HHHHHHhhcCHHHhcCCCCCCHHHHhc
Confidence 9999999999999986 666654
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i |
| >cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5 | Back alignment and domain information |
|---|
Probab=99.88 E-value=7.3e-22 Score=202.56 Aligned_cols=198 Identities=18% Similarity=0.238 Sum_probs=141.9
Q ss_pred CCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc------------------------
Q 042825 418 NNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK------------------------ 472 (631)
Q Consensus 418 ~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~------------------------ 472 (631)
++|+..+.||+|+||.||+|+.+ +++.||||++..........+.+.+|++++.+
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (287)
T cd07848 1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFE 80 (287)
T ss_pred CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEe
Confidence 46888999999999999999976 58899999997654444455678889888876
Q ss_pred ---CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCCcc
Q 042825 473 ---GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENGKH 525 (631)
Q Consensus 473 ---gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~~~ 525 (631)
+.+.+.+ ......+.+.....++.+++.| +.+||+|||+++...... .
T Consensus 81 ~~~~~~l~~~----~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~-~ 155 (287)
T cd07848 81 YVEKNMLELL----EEMPNGVPPEKVRSYIYQLIKAIHWCHKNDIVHRDIKPENLLISHNDVLKLCDFGFARNLSEGS-N 155 (287)
T ss_pred cCCCCHHHHH----HhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEEeeccCcccccccc-c
Confidence 1111111 1112357777777777777765 457899999998764221 1
Q ss_pred ccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHh------------Hh---
Q 042825 526 SILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWF------------QK--- 590 (631)
Q Consensus 526 ~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~------------~~--- 590 (631)
.......||..|+|||++.+..++.++|||||||++|||++|+.||....... ....+.... ..
T Consensus 156 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (287)
T cd07848 156 ANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEID-QLFTIQKVLGPLPAEQMKLFYSNPRF 234 (287)
T ss_pred ccccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHhhCCCCHHHHHhhhccchh
Confidence 22334678999999999988889999999999999999999999997643221 111111100 00
Q ss_pred ------------------hhcCChhHHHHHHhhcCCChhhHHhHHHHHH
Q 042825 591 ------------------MHKNHDTFQMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 591 ------------------~~~~~~~l~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
....+..+.+++.++|..||++|+++.++++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~ 283 (287)
T cd07848 235 HGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLN 283 (287)
T ss_pred cccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 0012356899999999999999999998775
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes |
| >KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.88 E-value=3.2e-23 Score=218.78 Aligned_cols=197 Identities=21% Similarity=0.306 Sum_probs=147.7
Q ss_pred CCcccceeecCCCceEEEEEEec-CCcEEEEEEEecC-CCCHHHHHHHHHHHHHHhc-----------------------
Q 042825 418 NNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELG-SVTEQGIAQFESEITVLTK----------------------- 472 (631)
Q Consensus 418 ~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~-~~~~~~~~~~~~Ei~~l~~----------------------- 472 (631)
.-|..++.||+|+-|.|-.|++. +|+.+|||++... .........+++||-+|+-
T Consensus 12 GpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylvl 91 (786)
T KOG0588|consen 12 GPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLVL 91 (786)
T ss_pred cceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEEE
Confidence 34677899999999999999865 6999999999765 3444455678899988864
Q ss_pred -----CChhHHhHh-----------hhhcCCCCCCHHHHHHHHHHhhcC--------CCcEEEeeccccccCCCCccccc
Q 042825 473 -----GTLGRHLFN-----------WEEEGLEPLEWNTRLNIALDVARG--------DDMRVADFGLVRLVPENGKHSIL 528 (631)
Q Consensus 473 -----gsL~~~L~~-----------~~~~~~~~L~~~~~~~I~~~ia~g--------~~~kl~DFGla~~~~~~~~~~~~ 528 (631)
|.|++++.. +..+...++.++|+.+|++...+- .++||+|||+|.+..++ ...
T Consensus 92 Eyv~gGELFdylv~kG~l~e~eaa~ff~QIi~gv~yCH~~~icHRDLKpENlLLd~~~nIKIADFGMAsLe~~g---klL 168 (786)
T KOG0588|consen 92 EYVPGGELFDYLVRKGPLPEREAAHFFRQILDGVSYCHAFNICHRDLKPENLLLDVKNNIKIADFGMASLEVPG---KLL 168 (786)
T ss_pred EecCCchhHHHHHhhCCCCCHHHHHHHHHHHHHHHHHhhhcceeccCCchhhhhhcccCEeeeccceeecccCC---ccc
Confidence 667766642 111223345566666665544333 45899999999876432 356
Q ss_pred cccccCcccccccccccCCCC-chhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHhH-----hhhcCChhHHHHH
Q 042825 529 TKVAGTFGYLAPEYIVTGRIT-AKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQ-----KMHKNHDTFQMAI 602 (631)
Q Consensus 529 ~~~~gt~~Y~aPE~~~~~~~~-~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~~-----~~~~~~~~l~~~i 602 (631)
.+.||++.|.|||++++.+|+ .++||||.||+||.|+||+.||++.+- ..+...++ .....+.+.++++
T Consensus 169 eTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdNi-----r~LLlKV~~G~f~MPs~Is~eaQdLL 243 (786)
T KOG0588|consen 169 ETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDDNI-----RVLLLKVQRGVFEMPSNISSEAQDLL 243 (786)
T ss_pred cccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCccH-----HHHHHHHHcCcccCCCcCCHHHHHHH
Confidence 678999999999999999985 689999999999999999999995432 22222222 2234467899999
Q ss_pred HhhcCCChhhHHhHHHHHHH
Q 042825 603 DKTIQLDEENLANVSTVAEL 622 (631)
Q Consensus 603 d~~L~~d~~~r~~~~~vl~l 622 (631)
.+||.+||+.|.++.++++-
T Consensus 244 r~ml~VDp~~RiT~~eI~kH 263 (786)
T KOG0588|consen 244 RRMLDVDPSTRITTEEILKH 263 (786)
T ss_pred HHHhccCccccccHHHHhhC
Confidence 99999999999999998874
|
|
| >cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.88 E-value=3.7e-22 Score=205.47 Aligned_cols=193 Identities=19% Similarity=0.222 Sum_probs=140.4
Q ss_pred CCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCC-CHHHHHHHHHHHHHHhc-----------------------
Q 042825 418 NNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSV-TEQGIAQFESEITVLTK----------------------- 472 (631)
Q Consensus 418 ~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~-~~~~~~~~~~Ei~~l~~----------------------- 472 (631)
++|+..+.||+|+||.||+|+.. +|+.||+|++..... ..+..+.+.+|++++.+
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (291)
T cd05612 1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLM 80 (291)
T ss_pred CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEE
Confidence 46888899999999999999976 589999999975432 12345668889888766
Q ss_pred -----CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCC
Q 042825 473 -----GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENG 523 (631)
Q Consensus 473 -----gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~ 523 (631)
|+|.+++.. ...+.+.....++.+++.| +.+||+|||+++.....
T Consensus 81 e~~~~~~L~~~~~~-----~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~~- 154 (291)
T cd05612 81 EYVPGGELFSYLRN-----SGRFSNSTGLFYASEIVCALEYLHSKEIVYRDLKPENILLDKEGHIKLTDFGFAKKLRDR- 154 (291)
T ss_pred eCCCCCCHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEEEecCcchhccCC-
Confidence 444444421 2346777777777777765 56899999999876321
Q ss_pred ccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHH-HhHhhhcCChhHHHHH
Q 042825 524 KHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLAT-WFQKMHKNHDTFQMAI 602 (631)
Q Consensus 524 ~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~-~~~~~~~~~~~l~~~i 602 (631)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||........ ...+.. ........+..+++++
T Consensus 155 ----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~li 229 (291)
T cd05612 155 ----TWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPFGI-YEKILAGKLEFPRHLDLYAKDLI 229 (291)
T ss_pred ----cccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHhCCcCCCccCCHHHHHHH
Confidence 2235799999999999888899999999999999999999999986543211 111111 1111112356789999
Q ss_pred HhhcCCChhhHHh-----HHHHHH
Q 042825 603 DKTIQLDEENLAN-----VSTVAE 621 (631)
Q Consensus 603 d~~L~~d~~~r~~-----~~~vl~ 621 (631)
.++|..||.+|++ +.++++
T Consensus 230 ~~~l~~dp~~R~~~~~~~~~~~l~ 253 (291)
T cd05612 230 KKLLVVDRTRRLGNMKNGADDVKN 253 (291)
T ss_pred HHHcCCCHHHccCCccCCHHHHhc
Confidence 9999999999995 666554
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt |
| >KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.88 E-value=3.7e-22 Score=202.15 Aligned_cols=142 Identities=24% Similarity=0.407 Sum_probs=107.3
Q ss_pred HhhcCCcccceeecCCCceEEEEEEecCCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc---------------------
Q 042825 414 RNATNNFSEENRLGRGGVGTVYKGELKDGTEVGVKRMELGSVTEQGIAQFESEITVLTK--------------------- 472 (631)
Q Consensus 414 ~~~t~~f~~~~~iG~G~fg~Vyk~~~~~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~--------------------- 472 (631)
+.........+.||+|.||+||+|.|+ |..||||++... ..+.|.+|.++...
T Consensus 207 RTiarqI~L~e~IGkGRyGEVwrG~wr-Ge~VAVKiF~sr-----dE~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs 280 (513)
T KOG2052|consen 207 RTIARQIVLQEIIGKGRFGEVWRGRWR-GEDVAVKIFSSR-----DERSWFRETEIYQTVMLRHENILGFIAADNKDNGS 280 (513)
T ss_pred HhhhheeEEEEEecCccccceeecccc-CCceEEEEeccc-----chhhhhhHHHHHHHHHhccchhhhhhhccccCCCc
Confidence 344456778899999999999999996 889999999653 33567777765433
Q ss_pred -------------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC--------------------------------CC
Q 042825 473 -------------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG--------------------------------DD 507 (631)
Q Consensus 473 -------------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g--------------------------------~~ 507 (631)
|||++||.. ..++-...+++++.+|.| +.
T Consensus 281 ~TQLwLvTdYHe~GSL~DyL~r------~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~ 354 (513)
T KOG2052|consen 281 WTQLWLVTDYHEHGSLYDYLNR------NTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGT 354 (513)
T ss_pred eEEEEEeeecccCCcHHHHHhh------ccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCc
Confidence 999999853 567888888888888877 33
Q ss_pred cEEEeeccccccCCCCc--cccccccccCcccccccccccCC----CC--chhhHHHHHHHHHHHHcC
Q 042825 508 MRVADFGLVRLVPENGK--HSILTKVAGTFGYLAPEYIVTGR----IT--AKVDVYSFGMILMDLITG 567 (631)
Q Consensus 508 ~kl~DFGla~~~~~~~~--~~~~~~~~gt~~Y~aPE~~~~~~----~~--~k~DVwS~GvvL~ElltG 567 (631)
..|+|+|||-....+.. .......+||.+|||||++...- |. ..+||||||.|+||+..+
T Consensus 355 C~IADLGLAv~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarR 422 (513)
T KOG2052|consen 355 CCIADLGLAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARR 422 (513)
T ss_pred EEEeeceeeEEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHH
Confidence 45999999976543322 12345679999999999986432 22 369999999999999854
|
|
| >PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=2.1e-22 Score=240.81 Aligned_cols=203 Identities=29% Similarity=0.491 Sum_probs=150.0
Q ss_pred ChhhHHHHHHHHHhCCCCCC--CCCC-CCCCCCccceeeCCCCCeEEEEeCCCCCcccCcchhcCCccCceeecccCccc
Q 042825 58 SRPDAAVMQDLKASFVIPKR--LKWS-DPDPCQWSHVICSDDGQVTNIELQDQNRKGTVPPILKKLSSMAVMYLENNQLR 134 (631)
Q Consensus 58 ~~~~~~~l~~~k~~~~~~~~--~~w~-~~~~C~w~gv~C~~~~~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~L~~N~l~ 134 (631)
.+.|..+|++||..+.+|.. .+|+ ..++|.|.||+|+..++|+.|+|++|+++|.+|+.+..+++|++|+|++|+++
T Consensus 27 ~~~~~~~l~~~~~~~~~~~~~~~~w~~~~~~c~w~gv~c~~~~~v~~L~L~~~~i~~~~~~~~~~l~~L~~L~Ls~n~~~ 106 (968)
T PLN00113 27 HAEELELLLSFKSSINDPLKYLSNWNSSADVCLWQGITCNNSSRVVSIDLSGKNISGKISSAIFRLPYIQTINLSNNQLS 106 (968)
T ss_pred CHHHHHHHHHHHHhCCCCcccCCCCCCCCCCCcCcceecCCCCcEEEEEecCCCccccCChHHhCCCCCCEEECCCCccC
Confidence 45788999999999976643 3794 56899999999987789999999999999999999999999999999999999
Q ss_pred CCCCcCc----ccccccccccccceecCCCCCCcCCCCCCcEEEccCCcccccCCCCCCC-----------------Ccc
Q 042825 135 GPIPSLV----GSLEFFSAYEANISGTIPDFIGTDTFPQLSYLDLGNNNLQGTIPSSFGM-----------------PFA 193 (631)
Q Consensus 135 g~lP~~~----~~L~~L~l~~n~l~g~ip~~~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~-----------------~~~ 193 (631)
|.+|..+ .+|++|+|++|+++|.+|.. .+++|++|+|++|.++|.+|..++. .+.
T Consensus 107 ~~ip~~~~~~l~~L~~L~Ls~n~l~~~~p~~----~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~ 182 (968)
T PLN00113 107 GPIPDDIFTTSSSLRYLNLSNNNFTGSIPRG----SIPNLETLDLSNNMLSGEIPNDIGSFSSLKVLDLGGNVLVGKIPN 182 (968)
T ss_pred CcCChHHhccCCCCCEEECcCCccccccCcc----ccCCCCEEECcCCcccccCChHHhcCCCCCEEECccCcccccCCh
Confidence 9898753 37888888888888777752 4567777777777777666655430 111
Q ss_pred CcCCCCCCCEEEeecCcCcccCChhhccCCCCCCEEEccCCCCcccCCCCC-CCCceEEeecCCCcccCCCCC
Q 042825 194 DISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNNLLQGPTPRFN-NSKLTVDMRTGSNCFCLDDPG 265 (631)
Q Consensus 194 ~~~~l~~L~~L~L~~N~l~g~iP~~~~~~l~~L~~L~ls~N~l~g~~p~~~-~~~~~~~l~~~~n~~~~~~~~ 265 (631)
.++++++|++|+|++|+++|.+|.. ++.+++|+.|+|++|.+++.+|... .+.....+++++|.+.+.+|.
T Consensus 183 ~~~~l~~L~~L~L~~n~l~~~~p~~-l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~ 254 (968)
T PLN00113 183 SLTNLTSLEFLTLASNQLVGQIPRE-LGQMKSLKWIYLGYNNLSGEIPYEIGGLTSLNHLDLVYNNLTGPIPS 254 (968)
T ss_pred hhhhCcCCCeeeccCCCCcCcCChH-HcCcCCccEEECcCCccCCcCChhHhcCCCCCEEECcCceeccccCh
Confidence 2456677777777777777666654 6677777777777777777666532 223344566677777765553
|
|
| >KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.88 E-value=2.9e-23 Score=214.89 Aligned_cols=206 Identities=20% Similarity=0.278 Sum_probs=146.4
Q ss_pred hhcCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCH-HHHHHHHHHHHHHhc--------------------
Q 042825 415 NATNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTE-QGIAQFESEITVLTK-------------------- 472 (631)
Q Consensus 415 ~~t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~-~~~~~~~~Ei~~l~~-------------------- 472 (631)
+..++|.-.+.||+|+|++||+|+.. .++++|||++.+..+.. +..+-..+|-++|.+
T Consensus 70 k~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sL 149 (604)
T KOG0592|consen 70 KTPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESL 149 (604)
T ss_pred CChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccce
Confidence 34457888899999999999999955 59999999997654322 222334455555543
Q ss_pred ---------CChhHHhHhhh-----------hcCCCCCCHHHHHHHHHHhhcC--------CCcEEEeeccccccCCCCc
Q 042825 473 ---------GTLGRHLFNWE-----------EEGLEPLEWNTRLNIALDVARG--------DDMRVADFGLVRLVPENGK 524 (631)
Q Consensus 473 ---------gsL~~~L~~~~-----------~~~~~~L~~~~~~~I~~~ia~g--------~~~kl~DFGla~~~~~~~~ 524 (631)
|+|.++++.+. .+....+++.|...|++...+. ++++|+|||-|+.+.+...
T Consensus 150 YFvLe~A~nGdll~~i~K~Gsfde~caR~YAAeIldAleylH~~GIIHRDlKPENILLd~dmhikITDFGsAK~l~~~~~ 229 (604)
T KOG0592|consen 150 YFVLEYAPNGDLLDLIKKYGSFDETCARFYAAEILDALEYLHSNGIIHRDLKPENILLDKDGHIKITDFGSAKILSPSQK 229 (604)
T ss_pred EEEEEecCCCcHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeEcCCCcEEEeeccccccCChhhc
Confidence 77777776532 2223456666666666655443 6788999999998853211
Q ss_pred c-----------ccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHhHhhhc
Q 042825 525 H-----------SILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQKMHK 593 (631)
Q Consensus 525 ~-----------~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~~~~~~ 593 (631)
. .....++||..|++||++.....+..+|+|+|||+||.|+.|++||.+.++.-.....+.--+.....
T Consensus 230 ~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~NeyliFqkI~~l~y~fp~~ 309 (604)
T KOG0592|consen 230 SQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANEYLIFQKIQALDYEFPEG 309 (604)
T ss_pred cccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccHHHHHHHHHHhcccCCCC
Confidence 1 11255899999999999999999999999999999999999999999765432222222211222222
Q ss_pred CChhHHHHHHhhcCCChhhHHhHHHHH
Q 042825 594 NHDTFQMAIDKTIQLDEENLANVSTVA 620 (631)
Q Consensus 594 ~~~~l~~~id~~L~~d~~~r~~~~~vl 620 (631)
..+.++++|++.|..||.+|.++.++-
T Consensus 310 fp~~a~dLv~KLLv~dp~~Rlt~~qIk 336 (604)
T KOG0592|consen 310 FPEDARDLIKKLLVRDPSDRLTSQQIK 336 (604)
T ss_pred CCHHHHHHHHHHHccCccccccHHHHh
Confidence 347889999999999999999987654
|
|
| >KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=99.88 E-value=8.6e-22 Score=187.41 Aligned_cols=199 Identities=20% Similarity=0.288 Sum_probs=138.8
Q ss_pred CCcccceeecCCCceEEEEEEe-cCCcEEEEEEEecCCCCHHHHHHHHHHHHHHhcC-----------------------
Q 042825 418 NNFSEENRLGRGGVGTVYKGEL-KDGTEVGVKRMELGSVTEQGIAQFESEITVLTKG----------------------- 473 (631)
Q Consensus 418 ~~f~~~~~iG~G~fg~Vyk~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~g----------------------- 473 (631)
+.|...+.+|+|.||.||+|+. ++|+.||||+++.....+.......+||..++.-
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfE 81 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVFE 81 (318)
T ss_pred chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEEE
Confidence 4677889999999999999994 4699999999998765544455678999888761
Q ss_pred ----ChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCCcc
Q 042825 474 ----TLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENGKH 525 (631)
Q Consensus 474 ----sL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~~~ 525 (631)
+|+..+ ++....|.-.+...+++.+.+| +.+||+|||+||......
T Consensus 82 fm~tdLe~vI----kd~~i~l~pa~iK~y~~m~LkGl~y~H~~~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~-- 155 (318)
T KOG0659|consen 82 FMPTDLEVVI----KDKNIILSPADIKSYMLMTLKGLAYCHSKWILHRDLKPNNLLISSDGQLKIADFGLARFFGSPN-- 155 (318)
T ss_pred eccccHHHHh----cccccccCHHHHHHHHHHHHHHHHHHHhhhhhcccCCccceEEcCCCcEEeecccchhccCCCC--
Confidence 111111 1222334444444444444444 668999999999985332
Q ss_pred ccccccccCcccccccccccC-CCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHH--------HHHhH-------
Q 042825 526 SILTKVAGTFGYLAPEYIVTG-RITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHL--------ATWFQ------- 589 (631)
Q Consensus 526 ~~~~~~~gt~~Y~aPE~~~~~-~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l--------~~~~~------- 589 (631)
...+..+-|.+|.|||.+.+. .|+..+||||.||++.||+-|.+-|.+..+-+...... ..|..
T Consensus 156 ~~~~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~LGTP~~~~WP~~~~lpdY 235 (318)
T KOG0659|consen 156 RIQTHQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRALGTPTPDQWPEMTSLPDY 235 (318)
T ss_pred cccccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHcCCCCcccCccccccccH
Confidence 233445789999999998876 59999999999999999999888777654322111111 12221
Q ss_pred --h----------h-hcCChhHHHHHHhhcCCChhhHHhHHHHHHH
Q 042825 590 --K----------M-HKNHDTFQMAIDKTIQLDEENLANVSTVAEL 622 (631)
Q Consensus 590 --~----------~-~~~~~~l~~~id~~L~~d~~~r~~~~~vl~l 622 (631)
. . ...+++..|++..++..+|..|.++.++++.
T Consensus 236 ~~~~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~ 281 (318)
T KOG0659|consen 236 VKIQQFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALKH 281 (318)
T ss_pred HHHhcCCCCccccccccccHHHHHHHHhhhccCchhcccHHHHhcc
Confidence 0 0 1123567899999999999999999998764
|
|
| >cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6 | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.4e-21 Score=200.70 Aligned_cols=197 Identities=20% Similarity=0.293 Sum_probs=139.1
Q ss_pred CCcccceeecCCCceEEEEEEec--CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc-----------------------
Q 042825 418 NNFSEENRLGRGGVGTVYKGELK--DGTEVGVKRMELGSVTEQGIAQFESEITVLTK----------------------- 472 (631)
Q Consensus 418 ~~f~~~~~iG~G~fg~Vyk~~~~--~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~----------------------- 472 (631)
++|...+.||+|+||.||+|+.. +++.||||+++...........+.+|++++.+
T Consensus 1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~ 80 (290)
T cd07862 1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDR 80 (290)
T ss_pred CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCC
Confidence 36888899999999999999863 47889999987543333233455666665543
Q ss_pred ------------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccc
Q 042825 473 ------------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLV 516 (631)
Q Consensus 473 ------------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla 516 (631)
+++.+++.. .....+++.....++.+++.| +.+||+|||++
T Consensus 81 ~~~~~lv~e~~~~~l~~~~~~---~~~~~~~~~~~~~i~~qi~~aL~~lH~~~iiH~dlkp~Nil~~~~~~~kl~Dfg~~ 157 (290)
T cd07862 81 ETKLTLVFEHVDQDLTTYLDK---VPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLA 157 (290)
T ss_pred CCcEEEEEccCCCCHHHHHHh---CCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEcCCCCEEEccccce
Confidence 122222211 122347888888888888876 46789999999
Q ss_pred cccCCCCccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHH---------H
Q 042825 517 RLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLAT---------W 587 (631)
Q Consensus 517 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~---------~ 587 (631)
+..... .......||+.|+|||++....++.++|||||||++|||++|+.||.+....+ ....+.. |
T Consensus 158 ~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~-~~~~i~~~~~~~~~~~~ 233 (290)
T cd07862 158 RIYSFQ---MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVD-QLGKILDVIGLPGEEDW 233 (290)
T ss_pred EeccCC---cccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHH-HHHHHHHHhCCCChhhc
Confidence 876322 22345678999999999988889999999999999999999999998654321 1112211 1
Q ss_pred hH------------------hh-hcCChhHHHHHHhhcCCChhhHHhHHHHHH
Q 042825 588 FQ------------------KM-HKNHDTFQMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 588 ~~------------------~~-~~~~~~l~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
.. .. ...++.+++++.+||..||++|+++.++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~ 286 (290)
T cd07862 234 PRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 286 (290)
T ss_pred hhhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhc
Confidence 10 00 112356789999999999999999998874
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla |
| >KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.87 E-value=5.2e-22 Score=197.26 Aligned_cols=201 Identities=19% Similarity=0.309 Sum_probs=144.6
Q ss_pred hcCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc----------------------
Q 042825 416 ATNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK---------------------- 472 (631)
Q Consensus 416 ~t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~---------------------- 472 (631)
....|...+.||+|+||.|+++..+ +|+.||||++..........++-.+|+.++++
T Consensus 20 i~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~ 99 (359)
T KOG0660|consen 20 IPRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFN 99 (359)
T ss_pred ccceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccc
Confidence 3445666789999999999999865 69999999997544445566788999998876
Q ss_pred ----------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccc
Q 042825 473 ----------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRL 518 (631)
Q Consensus 473 ----------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~ 518 (631)
-+|++.+ + ....|.-.|..-+..|+.+| .++||+|||+||.
T Consensus 100 DvYiV~elMetDL~~ii----k-~~~~L~d~H~q~f~YQiLrgLKyiHSAnViHRDLKPsNll~n~~c~lKI~DFGLAR~ 174 (359)
T KOG0660|consen 100 DVYLVFELMETDLHQII----K-SQQDLTDDHAQYFLYQILRGLKYIHSANVIHRDLKPSNLLLNADCDLKICDFGLARY 174 (359)
T ss_pred eeEEehhHHhhHHHHHH----H-cCccccHHHHHHHHHHHHHhcchhhcccccccccchhheeeccCCCEEeccccceee
Confidence 1122222 1 12236666666666666665 4579999999998
Q ss_pred cCCCCccccccccccCccccccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCh--------------HHHHH
Q 042825 519 VPENGKHSILTKVAGTFGYLAPEYIVT-GRITAKVDVYSFGMILMDLITGRKVVDATHSDP--------------EYIIH 583 (631)
Q Consensus 519 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~--------------~~~~~ 583 (631)
.........++..+.|.+|.|||.+.. ..||.+.||||.||++.||++|++-|.+...-. +....
T Consensus 175 ~~~~~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e~l~~ 254 (359)
T KOG0660|consen 175 LDKFFEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEEDLQK 254 (359)
T ss_pred ccccCcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHHHHHH
Confidence 853322344678899999999998764 569999999999999999999999998753221 11111
Q ss_pred HH-----HHhH------------hhhcCChhHHHHHHhhcCCChhhHHhHHHHHH
Q 042825 584 LA-----TWFQ------------KMHKNHDTFQMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 584 l~-----~~~~------------~~~~~~~~l~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
+. .+.+ .....++...+++++||..||.+|.++.++++
T Consensus 255 i~s~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~ 309 (359)
T KOG0660|consen 255 IRSEKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALA 309 (359)
T ss_pred hccHHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhc
Confidence 11 1111 11222467899999999999999999998775
|
|
| >PHA02988 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=9.5e-22 Score=201.62 Aligned_cols=188 Identities=18% Similarity=0.240 Sum_probs=139.6
Q ss_pred ceeecCCCceEEEEEEecCCcEEEEEEEecCCCCH-HHHHHHHHHHHHHhc-----------------------------
Q 042825 423 ENRLGRGGVGTVYKGELKDGTEVGVKRMELGSVTE-QGIAQFESEITVLTK----------------------------- 472 (631)
Q Consensus 423 ~~~iG~G~fg~Vyk~~~~~g~~vAvK~l~~~~~~~-~~~~~~~~Ei~~l~~----------------------------- 472 (631)
...||+|++|.||+|.+ +|+.||||+++...... ...+.|.+|+++|.+
T Consensus 25 ~~~i~~g~~~~v~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~Ey 103 (283)
T PHA02988 25 SVLIKENDQNSIYKGIF-NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILEY 103 (283)
T ss_pred CeEEeeCCceEEEEEEE-CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceEEEEEe
Confidence 46899999999999998 68999999997653322 224678899998877
Q ss_pred ---CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC-------------------------CCcEEEeeccccccCCCCc
Q 042825 473 ---GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG-------------------------DDMRVADFGLVRLVPENGK 524 (631)
Q Consensus 473 ---gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g-------------------------~~~kl~DFGla~~~~~~~~ 524 (631)
|+|.+++.. ...++|.+...++.++++| +.+||+|||+++.+...
T Consensus 104 ~~~g~L~~~l~~-----~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~~~-- 176 (283)
T PHA02988 104 CTRGYLREVLDK-----EKDLSFKTKLDMAIDCCKGLYNLYKYTNKPYKNLTSVSFLVTENYKLKIICHGLEKILSSP-- 176 (283)
T ss_pred CCCCcHHHHHhh-----CCCCChhHHHHHHHHHHHHHHHHHhcCCCCCCcCChhhEEECCCCcEEEcccchHhhhccc--
Confidence 344444431 2457888888888887765 45789999999876321
Q ss_pred cccccccccCccccccccccc--CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHH-HHhHhhh--cCChhHH
Q 042825 525 HSILTKVAGTFGYLAPEYIVT--GRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLA-TWFQKMH--KNHDTFQ 599 (631)
Q Consensus 525 ~~~~~~~~gt~~Y~aPE~~~~--~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~-~~~~~~~--~~~~~l~ 599 (631)
.....|+..|+|||++.+ ..++.++|||||||++|||++|+.||......+. ...+. ...+... ..++.+.
T Consensus 177 ---~~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~~~-~~~i~~~~~~~~~~~~~~~~l~ 252 (283)
T PHA02988 177 ---PFKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTKEI-YDLIINKNNSLKLPLDCPLEIK 252 (283)
T ss_pred ---cccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHHHH-HHHHHhcCCCCCCCCcCcHHHH
Confidence 123468899999999876 6799999999999999999999999986543211 11111 1111111 2346899
Q ss_pred HHHHhhcCCChhhHHhHHHHHHH
Q 042825 600 MAIDKTIQLDEENLANVSTVAEL 622 (631)
Q Consensus 600 ~~id~~L~~d~~~r~~~~~vl~l 622 (631)
+++.+|+..||.+||++.++++.
T Consensus 253 ~li~~cl~~dp~~Rps~~ell~~ 275 (283)
T PHA02988 253 CIVEACTSHDSIKRPNIKEILYN 275 (283)
T ss_pred HHHHHHhcCCcccCcCHHHHHHH
Confidence 99999999999999999998864
|
|
| >cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B | Back alignment and domain information |
|---|
Probab=99.87 E-value=4.8e-22 Score=207.86 Aligned_cols=191 Identities=18% Similarity=0.265 Sum_probs=136.4
Q ss_pred eeecCCCceEEEEEEec-CCcEEEEEEEecCCC-CHHHHHHHHHHHHHHhc----------------------------C
Q 042825 424 NRLGRGGVGTVYKGELK-DGTEVGVKRMELGSV-TEQGIAQFESEITVLTK----------------------------G 473 (631)
Q Consensus 424 ~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~-~~~~~~~~~~Ei~~l~~----------------------------g 473 (631)
+.||+|+||.||+++.+ +|+.||||+++.... ......++.+|++++.+ |
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~ 80 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCC
Confidence 46999999999999865 689999999975432 22345667889888865 4
Q ss_pred ChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCCcccccc
Q 042825 474 TLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENGKHSILT 529 (631)
Q Consensus 474 sL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~~~~~~~ 529 (631)
+|.+++.. ...+.+.....++.+++.| +.+||+|||+++..... .....
T Consensus 81 ~L~~~l~~-----~~~~~~~~~~~~~~qi~~~L~~lH~~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~--~~~~~ 153 (323)
T cd05571 81 ELFFHLSR-----ERVFSEDRARFYGAEIVSALGYLHSCDVVYRDLKLENLMLDKDGHIKITDFGLCKEGISD--GATMK 153 (323)
T ss_pred cHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCCCEEEeeCCCCcccccC--CCccc
Confidence 55444431 2356777777777777665 45789999999864211 11234
Q ss_pred ccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHhHhhhcCChhHHHHHHhhcCCC
Q 042825 530 KVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQKMHKNHDTFQMAIDKTIQLD 609 (631)
Q Consensus 530 ~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~id~~L~~d 609 (631)
..+||+.|+|||++.+..++.++||||+||++|||++|+.||.......................+.++.+++.++|..|
T Consensus 154 ~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~li~~~L~~d 233 (323)
T cd05571 154 TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLSPEAKSLLAGLLKKD 233 (323)
T ss_pred ceecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHccCC
Confidence 46799999999999988999999999999999999999999975432211111111111111223568999999999999
Q ss_pred hhhHH-----hHHHHHH
Q 042825 610 EENLA-----NVSTVAE 621 (631)
Q Consensus 610 ~~~r~-----~~~~vl~ 621 (631)
|++|+ ++.++++
T Consensus 234 P~~R~~~~~~~~~~ll~ 250 (323)
T cd05571 234 PKQRLGGGPEDAKEIME 250 (323)
T ss_pred HHHcCCCCCCCHHHHHc
Confidence 99999 6777664
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be |
| >KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.87 E-value=3.4e-22 Score=204.02 Aligned_cols=201 Identities=22% Similarity=0.349 Sum_probs=148.5
Q ss_pred cCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhcCC-------hhH-----------
Q 042825 417 TNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTKGT-------LGR----------- 477 (631)
Q Consensus 417 t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~gs-------L~~----------- 477 (631)
.++|...+.||.|.||.||+|+-. .|..||||+|+.......+ .--.||+..|.+-+ |.+
T Consensus 9 m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee-~~nLREvksL~kln~hpniikL~Evi~d~~~~L~f 87 (538)
T KOG0661|consen 9 MDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEE-CMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILYF 87 (538)
T ss_pred HHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHH-HHHHHHHHHHHhcCCCCcchhhHHHhhccCceEee
Confidence 356888899999999999999854 6999999999876544322 22367888877722 111
Q ss_pred -------HhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCCccc
Q 042825 478 -------HLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENGKHS 526 (631)
Q Consensus 478 -------~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~~~~ 526 (631)
.|++.+.+....+......+|+.|+.+| ..+||+|||+||.+.. ..
T Consensus 88 VfE~Md~NLYqLmK~R~r~fse~~irnim~QilqGL~hiHk~GfFHRDlKPENiLi~~~~~iKiaDFGLARev~S---kp 164 (538)
T KOG0661|consen 88 VFEFMDCNLYQLMKDRNRLFSESDIRNIMYQILQGLAHIHKHGFFHRDLKPENILISGNDVIKIADFGLAREVRS---KP 164 (538)
T ss_pred eHHhhhhhHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHHhcCcccccCChhheEecccceeEeccccccccccc---CC
Confidence 1222233446778888899999999988 3578999999998742 34
Q ss_pred cccccccCccccccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHH---------HHhH-------
Q 042825 527 ILTKVAGTFGYLAPEYIVT-GRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLA---------TWFQ------- 589 (631)
Q Consensus 527 ~~~~~~gt~~Y~aPE~~~~-~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~---------~~~~------- 589 (631)
..+.++.|.+|.|||++.+ +-|+.++||||+||+++|+.+-++-|.+..+-++- -.+. .|..
T Consensus 165 PYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi-~KIc~VLGtP~~~~~~eg~~La~~ 243 (538)
T KOG0661|consen 165 PYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQI-YKICEVLGTPDKDSWPEGYNLASA 243 (538)
T ss_pred CcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHH-HHHHHHhCCCccccchhHHHHHHH
Confidence 5678899999999998865 56999999999999999999999999886543211 1111 1221
Q ss_pred --------------hh-hcCChhHHHHHHhhcCCChhhHHhHHHHHHH
Q 042825 590 --------------KM-HKNHDTFQMAIDKTIQLDEENLANVSTVAEL 622 (631)
Q Consensus 590 --------------~~-~~~~~~l~~~id~~L~~d~~~r~~~~~vl~l 622 (631)
.+ ...+.++.+++.+++..||.+|+++.++++.
T Consensus 244 mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~ 291 (538)
T KOG0661|consen 244 MNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQH 291 (538)
T ss_pred hccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhcC
Confidence 00 1124678999999999999999999987753
|
|
| >cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta | Back alignment and domain information |
|---|
Probab=99.87 E-value=7.8e-22 Score=206.24 Aligned_cols=190 Identities=19% Similarity=0.265 Sum_probs=135.3
Q ss_pred CcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCC-CHHHHHHHHHHHHHHhc------------------------
Q 042825 419 NFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSV-TEQGIAQFESEITVLTK------------------------ 472 (631)
Q Consensus 419 ~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~-~~~~~~~~~~Ei~~l~~------------------------ 472 (631)
+|...+.||+|+||.||+|+.. +++.||||++..... .....+.+..|..++..
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVM 80 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEE
Confidence 4778899999999999999876 478999999976432 12233456666666543
Q ss_pred -----CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCC
Q 042825 473 -----GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENG 523 (631)
Q Consensus 473 -----gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~ 523 (631)
|+|..++.. ...+++.....++.+++.| +.+||+|||+++......
T Consensus 81 E~~~~g~L~~~~~~-----~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~~ 155 (323)
T cd05616 81 EYVNGGDLMYQIQQ-----VGRFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENMWDG 155 (323)
T ss_pred cCCCCCCHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCCEEecCCCHHHeEECCCCcEEEccCCCceecCCCC
Confidence 444444421 2357777888888887766 457899999998643111
Q ss_pred ccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHH-HhHhhhcCChhHHHHH
Q 042825 524 KHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLAT-WFQKMHKNHDTFQMAI 602 (631)
Q Consensus 524 ~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~-~~~~~~~~~~~l~~~i 602 (631)
.......||+.|+|||++.+..++.++|||||||++|||+||+.||........ ...+.. ........+.++.+++
T Consensus 156 --~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~~~-~~~i~~~~~~~p~~~s~~~~~li 232 (323)
T cd05616 156 --VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDEL-FQSIMEHNVAYPKSMSKEAVAIC 232 (323)
T ss_pred --CccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHHHH-HHHHHhCCCCCCCcCCHHHHHHH
Confidence 123456799999999999999999999999999999999999999986543211 111111 1111122357889999
Q ss_pred HhhcCCChhhHHhH
Q 042825 603 DKTIQLDEENLANV 616 (631)
Q Consensus 603 d~~L~~d~~~r~~~ 616 (631)
.++|..+|.+|.+.
T Consensus 233 ~~~l~~~p~~R~~~ 246 (323)
T cd05616 233 KGLMTKHPGKRLGC 246 (323)
T ss_pred HHHcccCHHhcCCC
Confidence 99999999999764
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and |
| >KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.2e-21 Score=203.07 Aligned_cols=195 Identities=18% Similarity=0.328 Sum_probs=137.3
Q ss_pred hcCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCC-HHHHHHHHHHHHHHhc---------------------
Q 042825 416 ATNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVT-EQGIAQFESEITVLTK--------------------- 472 (631)
Q Consensus 416 ~t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~-~~~~~~~~~Ei~~l~~--------------------- 472 (631)
..++|+...+||+|+||.||.|+-+ +|..+|+|++++..+- ..+.+....|-.+|..
T Consensus 139 ~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LYL 218 (550)
T KOG0605|consen 139 SLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLYL 218 (550)
T ss_pred CcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeEE
Confidence 5688999999999999999999966 5999999999876542 2445667777777765
Q ss_pred -------CChhHHhHhhhhcCCCCCCHH--------------HHHHHHHHhhc--------CCCcEEEeeccccccCC--
Q 042825 473 -------GTLGRHLFNWEEEGLEPLEWN--------------TRLNIALDVAR--------GDDMRVADFGLVRLVPE-- 521 (631)
Q Consensus 473 -------gsL~~~L~~~~~~~~~~L~~~--------------~~~~I~~~ia~--------g~~~kl~DFGla~~~~~-- 521 (631)
|++...|.. .+.-.-+|. |.+.+++...+ .+++||+||||++-+..
T Consensus 219 iMEylPGGD~mTLL~~---~~~L~e~~arfYiaE~vlAI~~iH~~gyIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~~~~ 295 (550)
T KOG0605|consen 219 IMEYLPGGDMMTLLMR---KDTLTEDWARFYIAETVLAIESIHQLGYIHRDIKPDNLLIDAKGHIKLSDFGLSTGLDKKH 295 (550)
T ss_pred EEEecCCccHHHHHHh---cCcCchHHHHHHHHHHHHHHHHHHHcCcccccCChhheeecCCCCEeeccccccchhhhhh
Confidence 666665532 221122222 11222211111 17899999999853210
Q ss_pred --------------------CC-c-----c-----------------ccccccccCcccccccccccCCCCchhhHHHHH
Q 042825 522 --------------------NG-K-----H-----------------SILTKVAGTFGYLAPEYIVTGRITAKVDVYSFG 558 (631)
Q Consensus 522 --------------------~~-~-----~-----------------~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~G 558 (631)
.. . . ...-..+|||-|||||++.+..|+..+|+||+|
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwWSLG 375 (550)
T KOG0605|consen 296 RIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWWSLG 375 (550)
T ss_pred hhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccHHHHH
Confidence 00 0 0 001224799999999999999999999999999
Q ss_pred HHHHHHHcCCCCCCCCCCChHHHHHHHHHhHhh-----hcCChhHHHHHHhhcCCChhhHHh
Q 042825 559 MILMDLITGRKVVDATHSDPEYIIHLATWFQKM-----HKNHDTFQMAIDKTIQLDEENLAN 615 (631)
Q Consensus 559 vvL~ElltG~~P~~~~~~~~~~~~~l~~~~~~~-----~~~~~~l~~~id~~L~~d~~~r~~ 615 (631)
||||||+.|-+||.+....+ ....+..|...+ ...+++..|+|.++|. |++.|..
T Consensus 376 ~ImyEmLvGyPPF~s~tp~~-T~rkI~nwr~~l~fP~~~~~s~eA~DLI~rll~-d~~~RLG 435 (550)
T KOG0605|consen 376 CIMYEMLVGYPPFCSETPQE-TYRKIVNWRETLKFPEEVDLSDEAKDLITRLLC-DPENRLG 435 (550)
T ss_pred HHHHHHHhCCCCCCCCCHHH-HHHHHHHHhhhccCCCcCcccHHHHHHHHHHhc-CHHHhcC
Confidence 99999999999999876554 456677776332 2234788999999996 8998865
|
|
| >KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.3e-21 Score=198.36 Aligned_cols=204 Identities=19% Similarity=0.323 Sum_probs=149.2
Q ss_pred cCCcccceeecCCCceEEEEEE-ecCCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc-----------------------
Q 042825 417 TNNFSEENRLGRGGVGTVYKGE-LKDGTEVGVKRMELGSVTEQGIAQFESEITVLTK----------------------- 472 (631)
Q Consensus 417 t~~f~~~~~iG~G~fg~Vyk~~-~~~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~----------------------- 472 (631)
.+.|+..++||.|..++||+|+ .+.+..||||++..+.... ......+|+..|+-
T Consensus 25 ~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~-~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWvVm 103 (516)
T KOG0582|consen 25 AKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNN-DLDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWVVM 103 (516)
T ss_pred ccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhh-hHHHHHHHHHHhhhcCCCCcceEEEEEEecceeEEee
Confidence 3578889999999999999998 4568999999999877654 37788999988765
Q ss_pred -----CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCC
Q 042825 473 -----GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENG 523 (631)
Q Consensus 473 -----gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~ 523 (631)
|++.+.+..+...+ ++......|..++.+| +.+||+|||..-.+...+
T Consensus 104 pfMa~GS~ldIik~~~~~G---l~E~~Ia~iLre~LkaL~YLH~~G~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~~G 180 (516)
T KOG0582|consen 104 PFMAGGSLLDIIKTYYPDG---LEEASIATILREVLKALDYLHQNGHIHRDVKAGNILIDSDGTVKLADFGVSASLFDSG 180 (516)
T ss_pred hhhcCCcHHHHHHHHcccc---ccHHHHHHHHHHHHHHHHHHHhcCceecccccccEEEcCCCcEEEcCceeeeeecccC
Confidence 88888876655443 3333333343333333 678999999987775443
Q ss_pred cccc--ccccccCcccccccccccC--CCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHhHhh--------
Q 042825 524 KHSI--LTKVAGTFGYLAPEYIVTG--RITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQKM-------- 591 (631)
Q Consensus 524 ~~~~--~~~~~gt~~Y~aPE~~~~~--~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~~~~-------- 591 (631)
.... ...++||+.|||||+++.. .|+.|+|||||||...||.+|..||....+.......+..-+...
T Consensus 181 ~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl~tLqn~pp~~~t~~~~~d 260 (516)
T KOG0582|consen 181 DRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKVLLLTLQNDPPTLLTSGLDKD 260 (516)
T ss_pred ceeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHHHHHHhcCCCCCcccccCChH
Confidence 2211 2567999999999996543 599999999999999999999999987655433333332222110
Q ss_pred --hcCChhHHHHHHhhcCCChhhHHhHHHHHHHHH
Q 042825 592 --HKNHDTFQMAIDKTIQLDEENLANVSTVAELGD 624 (631)
Q Consensus 592 --~~~~~~l~~~id~~L~~d~~~r~~~~~vl~lal 624 (631)
-..+..++++|..||+.||..||++.++++-+.
T Consensus 261 ~~k~~~ksf~e~i~~CL~kDP~kRptAskLlkh~F 295 (516)
T KOG0582|consen 261 EDKKFSKSFREMIALCLVKDPSKRPTASKLLKHAF 295 (516)
T ss_pred HhhhhcHHHHHHHHHHhhcCcccCCCHHHHhccHH
Confidence 011246889999999999999999999886543
|
|
| >KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.86 E-value=4.7e-22 Score=201.42 Aligned_cols=204 Identities=25% Similarity=0.371 Sum_probs=142.0
Q ss_pred CCcccceeecCCCceEEEEEEecC-CcEEEEEEEecCCCCHHHHHHHHHHHHHHhc------------------------
Q 042825 418 NNFSEENRLGRGGVGTVYKGELKD-GTEVGVKRMELGSVTEQGIAQFESEITVLTK------------------------ 472 (631)
Q Consensus 418 ~~f~~~~~iG~G~fg~Vyk~~~~~-g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~------------------------ 472 (631)
.++...+.||+|+||.||++...+ |...|||.+...... ..+.+++|+.+|.+
T Consensus 17 ~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~--~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~ 94 (313)
T KOG0198|consen 17 SNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSP--TSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIF 94 (313)
T ss_pred chhhhhccccCccceEEEEEEecCCCcceeeeeeecccch--hHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEee
Confidence 356678999999999999999764 999999999765322 26678999999877
Q ss_pred ------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC-------------------------CCcEEEeeccccccCC
Q 042825 473 ------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG-------------------------DDMRVADFGLVRLVPE 521 (631)
Q Consensus 473 ------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g-------------------------~~~kl~DFGla~~~~~ 521 (631)
|+|.+++..+ +. .|+.....+...++++| +.+||+|||+++....
T Consensus 95 mEy~~~GsL~~~~~~~---g~-~l~E~~v~~ytr~iL~GL~ylHs~g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~ 170 (313)
T KOG0198|consen 95 MEYAPGGSLSDLIKRY---GG-KLPEPLVRRYTRQILEGLAYLHSKGIVHCDIKPANILLDPSNGDVKLADFGLAKKLES 170 (313)
T ss_pred eeccCCCcHHHHHHHc---CC-CCCHHHHHHHHHHHHHHHHHHHhCCEeccCcccceEEEeCCCCeEEeccCcccccccc
Confidence 4555555321 11 45655555555555544 3789999999987742
Q ss_pred C-CccccccccccCcccccccccccCC-CCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHH-HH-hHh-hhcCCh
Q 042825 522 N-GKHSILTKVAGTFGYLAPEYIVTGR-ITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLA-TW-FQK-MHKNHD 596 (631)
Q Consensus 522 ~-~~~~~~~~~~gt~~Y~aPE~~~~~~-~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~-~~-~~~-~~~~~~ 596 (631)
. ..........||+.|||||++..+. ...++||||+||++.||+||+.||............+. .. .+. ....++
T Consensus 171 ~~~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~~~~~~~~~ig~~~~~P~ip~~ls~ 250 (313)
T KOG0198|consen 171 KGTKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEFFEEAEALLLIGREDSLPEIPDSLSD 250 (313)
T ss_pred ccccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhhcchHHHHHHHhccCCCCCCCcccCH
Confidence 1 1112234578999999999998643 34599999999999999999999975311111111111 11 010 111246
Q ss_pred hHHHHHHhhcCCChhhHHhHHHHHHHHHhhh
Q 042825 597 TFQMAIDKTIQLDEENLANVSTVAELGDHCC 627 (631)
Q Consensus 597 ~l~~~id~~L~~d~~~r~~~~~vl~lal~C~ 627 (631)
+.+++++++++.+|+.|+++.++++.-..+.
T Consensus 251 ~a~~Fl~~C~~~~p~~Rpta~eLL~hpf~~~ 281 (313)
T KOG0198|consen 251 EAKDFLRKCFKRDPEKRPTAEELLEHPFLKQ 281 (313)
T ss_pred HHHHHHHHHhhcCcccCcCHHHHhhChhhhc
Confidence 8899999999999999999999988766554
|
|
| >KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.2e-21 Score=210.37 Aligned_cols=192 Identities=23% Similarity=0.322 Sum_probs=141.6
Q ss_pred ccceeecCCCceEEEEEEe-cC----CcEEEEEEEecCCCCHHHHHHHHHHHHHHhc-----------------------
Q 042825 421 SEENRLGRGGVGTVYKGEL-KD----GTEVGVKRMELGSVTEQGIAQFESEITVLTK----------------------- 472 (631)
Q Consensus 421 ~~~~~iG~G~fg~Vyk~~~-~~----g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~----------------------- 472 (631)
...++||+|+||+||||.+ +. ..+||+|++.... ..+...++..|+-+|.+
T Consensus 699 kk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t-~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~~qlvtq 777 (1177)
T KOG1025|consen 699 KKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFT-SPKASIELLDEALRMASLDHPNLLRLLGVCMLSTLQLVTQ 777 (1177)
T ss_pred hhhceeccccceeEEeeeEecCCceecceeEEEEeeccC-CchhhHHHHHHHHHHhcCCCchHHHHhhhcccchHHHHHH
Confidence 4568999999999999985 33 3479999987654 33456778888877766
Q ss_pred ----CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCCc
Q 042825 473 ----GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENGK 524 (631)
Q Consensus 473 ----gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~~ 524 (631)
|.|.+|++. ....+.-...+++..|||+| ..+||+|||+|+.+..+..
T Consensus 778 ~mP~G~LlDyvr~----hr~~igsq~lLnw~~QIAkgM~YLe~qrlVHrdLaaRNVLVksP~hvkitdfgla~ll~~d~~ 853 (1177)
T KOG1025|consen 778 LMPLGCLLDYVRE----HRDNIGSQDLLNWCYQIAKGMKYLEEQRLVHRDLAARNVLVKSPNHVKITDFGLAKLLAPDEK 853 (1177)
T ss_pred hcccchHHHHHHH----hhccccHHHHHHHHHHHHHHHHHHHhcchhhhhhhhhheeecCCCeEEEEecchhhccCcccc
Confidence 777777653 34567777788888999988 4578999999999976655
Q ss_pred cccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChHHHHHHHHHhHhhhcCC----hhHH
Q 042825 525 HSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT-GRKVVDATHSDPEYIIHLATWFQKMHKNH----DTFQ 599 (631)
Q Consensus 525 ~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~Ellt-G~~P~~~~~~~~~~~~~l~~~~~~~~~~~----~~l~ 599 (631)
........-.+.|||-|.+....|+.++|||||||.+||++| |..|+++...+ +.-++.+.-.+ +... -++-
T Consensus 854 ey~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~--eI~dlle~geR-LsqPpiCtiDVy 930 (1177)
T KOG1025|consen 854 EYSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAE--EIPDLLEKGER-LSQPPICTIDVY 930 (1177)
T ss_pred cccccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHH--HhhHHHhcccc-CCCCCCccHHHH
Confidence 544455566789999999999999999999999999999999 99999976543 22222222222 2221 2445
Q ss_pred HHHHhhcCCChhhHHhHHHHH
Q 042825 600 MAIDKTIQLDEENLANVSTVA 620 (631)
Q Consensus 600 ~~id~~L~~d~~~r~~~~~vl 620 (631)
-++-+++..|+..|+.++++.
T Consensus 931 ~~mvkCwmid~~~rp~fkel~ 951 (1177)
T KOG1025|consen 931 MVMVKCWMIDADSRPTFKELA 951 (1177)
T ss_pred HHHHHHhccCcccCccHHHHH
Confidence 556666667888888887754
|
|
| >cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.3e-21 Score=204.73 Aligned_cols=190 Identities=20% Similarity=0.280 Sum_probs=134.8
Q ss_pred CcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCC-CHHHHHHHHHHHHHHhc------------------------
Q 042825 419 NFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSV-TEQGIAQFESEITVLTK------------------------ 472 (631)
Q Consensus 419 ~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~-~~~~~~~~~~Ei~~l~~------------------------ 472 (631)
+|+..+.||+|+||.||+|+.. +++.||||++..... .....+.+..|++++..
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM 80 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEE
Confidence 4778899999999999999976 478999999975422 22345567778777654
Q ss_pred -----CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCC
Q 042825 473 -----GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENG 523 (631)
Q Consensus 473 -----gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~ 523 (631)
|+|.+++.. ...+.+.....++.+++.| +.+||+|||+++......
T Consensus 81 E~~~~g~L~~~~~~-----~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~ 155 (324)
T cd05587 81 EYVNGGDLMYHIQQ-----VGKFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDAEGHIKIADFGMCKENIFGG 155 (324)
T ss_pred cCCCCCcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEEcCCCCEEEeecCcceecCCCC
Confidence 344444321 2346777777777777765 467899999987532111
Q ss_pred ccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHhHh-hhcCChhHHHHH
Q 042825 524 KHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQK-MHKNHDTFQMAI 602 (631)
Q Consensus 524 ~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~~~-~~~~~~~l~~~i 602 (631)
.......||+.|+|||++.+..++.++||||+||++|||+||+.||.+....+ ....+...... ....+.++.+++
T Consensus 156 --~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~li 232 (324)
T cd05587 156 --KTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDE-LFQSIMEHNVSYPKSLSKEAVSIC 232 (324)
T ss_pred --CceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHH-HHHHHHcCCCCCCCCCCHHHHHHH
Confidence 12344679999999999999899999999999999999999999998653221 11111111111 112346788999
Q ss_pred HhhcCCChhhHHhH
Q 042825 603 DKTIQLDEENLANV 616 (631)
Q Consensus 603 d~~L~~d~~~r~~~ 616 (631)
.+++..+|.+|.+.
T Consensus 233 ~~~l~~~P~~R~~~ 246 (324)
T cd05587 233 KGLLTKHPAKRLGC 246 (324)
T ss_pred HHHhhcCHHHcCCC
Confidence 99999999999764
|
Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory |
| >KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.86 E-value=7.7e-24 Score=198.64 Aligned_cols=209 Identities=21% Similarity=0.284 Sum_probs=155.6
Q ss_pred hcCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc----------------------
Q 042825 416 ATNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK---------------------- 472 (631)
Q Consensus 416 ~t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~---------------------- 472 (631)
.++.|+..++||+|.|+.||++... +|+.+|+|.+.....+....++..+|+.+...
T Consensus 9 f~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylv 88 (355)
T KOG0033|consen 9 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLV 88 (355)
T ss_pred cchhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEE
Confidence 4567888899999999999999754 69999999998776666677888999887654
Q ss_pred ------CChhHHhHh-----------hhhcCCCCCCHHHHHHHHHHhhcC-----------CCcEEEeeccccccCCCCc
Q 042825 473 ------GTLGRHLFN-----------WEEEGLEPLEWNTRLNIALDVARG-----------DDMRVADFGLVRLVPENGK 524 (631)
Q Consensus 473 ------gsL~~~L~~-----------~~~~~~~~L~~~~~~~I~~~ia~g-----------~~~kl~DFGla~~~~~~~~ 524 (631)
++|..-+.. +..+....|.+.|..+|++...+. .-+|++|||+|..+. .
T Consensus 89 Fe~m~G~dl~~eIV~R~~ySEa~aSH~~rQiLeal~yCH~n~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~---~ 165 (355)
T KOG0033|consen 89 FDLVTGGELFEDIVAREFYSEADASHCIQQILEALAYCHSNGIVHRDLKPENLLLASKAKGAAVKLADFGLAIEVN---D 165 (355)
T ss_pred EecccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeeeeccCCCceeecccceEEEeC---C
Confidence 333221110 223344556666666666554433 457899999999885 2
Q ss_pred cccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHhH----hhhcCChhHHH
Q 042825 525 HSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQ----KMHKNHDTFQM 600 (631)
Q Consensus 525 ~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~~----~~~~~~~~l~~ 600 (631)
.......+||++|||||++...+|+..+|||+-||+||-|+.|+.||.+......+...+..-+. .....+++.++
T Consensus 166 g~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~rlye~I~~g~yd~~~~~w~~is~~Ak~ 245 (355)
T KOG0033|consen 166 GEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYEQIKAGAYDYPSPEWDTVTPEAKS 245 (355)
T ss_pred ccccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccHHHHHHHHhccccCCCCcccCcCCHHHHH
Confidence 23567789999999999999999999999999999999999999999875443333333322211 22234678999
Q ss_pred HHHhhcCCChhhHHhHHHHHHHHHhhh
Q 042825 601 AIDKTIQLDEENLANVSTVAELGDHCC 627 (631)
Q Consensus 601 ~id~~L~~d~~~r~~~~~vl~lal~C~ 627 (631)
+|++||..||.+|.++.++++--+.|-
T Consensus 246 LvrrML~~dP~kRIta~EAL~HpWi~~ 272 (355)
T KOG0033|consen 246 LIRRMLTVNPKKRITADEALKHPWICN 272 (355)
T ss_pred HHHHHhccChhhhccHHHHhCCchhcc
Confidence 999999999999999999887666653
|
|
| >KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.7e-21 Score=205.02 Aligned_cols=199 Identities=22% Similarity=0.331 Sum_probs=141.8
Q ss_pred hhcCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCC---HHHHHHHHHHHHHHhc------------------
Q 042825 415 NATNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVT---EQGIAQFESEITVLTK------------------ 472 (631)
Q Consensus 415 ~~t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~---~~~~~~~~~Ei~~l~~------------------ 472 (631)
...++|...+.||+|+||+||.|+.. +|..||||.+...... ....+...+|+.++++
T Consensus 14 ~~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~ 93 (370)
T KOG0583|consen 14 LSIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPT 93 (370)
T ss_pred cccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCC
Confidence 34568899999999999999999854 6899999977664221 1234456688877765
Q ss_pred -----------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC-------------------------CCcEEEeeccc
Q 042825 473 -----------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG-------------------------DDMRVADFGLV 516 (631)
Q Consensus 473 -----------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g-------------------------~~~kl~DFGla 516 (631)
|+|.+++.. ...+.......+..|++.| +++||+|||++
T Consensus 94 ~~~ivmEy~~gGdL~~~i~~-----~g~l~E~~ar~~F~Qlisav~y~H~~gi~HRDLK~ENilld~~~~~~Kl~DFG~s 168 (370)
T KOG0583|consen 94 KIYIVMEYCSGGDLFDYIVN-----KGRLKEDEARKYFRQLISAVAYCHSRGIVHRDLKPENILLDGNEGNLKLSDFGLS 168 (370)
T ss_pred eEEEEEEecCCccHHHHHHH-----cCCCChHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEecCCCCCEEEeccccc
Confidence 577777643 1223333333344343332 57899999999
Q ss_pred cccCCCCccccccccccCcccccccccccCC-CC-chhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHH-HhHhhhc
Q 042825 517 RLVPENGKHSILTKVAGTFGYLAPEYIVTGR-IT-AKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLAT-WFQKMHK 593 (631)
Q Consensus 517 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~~-~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~-~~~~~~~ 593 (631)
.... .........+||+.|+|||++.+.. |+ .++||||+||+||.|++|+.||++...... ...+.. .+.....
T Consensus 169 ~~~~--~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~~l-~~ki~~~~~~~p~~ 245 (370)
T KOG0583|consen 169 AISP--GEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNVPNL-YRKIRKGEFKIPSY 245 (370)
T ss_pred cccC--CCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccHHHH-HHHHhcCCccCCCC
Confidence 9873 2223466789999999999999887 86 689999999999999999999997433211 111111 1111111
Q ss_pred C-ChhHHHHHHhhcCCChhhHHhHHHHHH
Q 042825 594 N-HDTFQMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 594 ~-~~~l~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
. +.++.+++.++|..+|.+|.++.++++
T Consensus 246 ~~S~~~~~Li~~mL~~~P~~R~t~~~i~~ 274 (370)
T KOG0583|consen 246 LLSPEARSLIEKMLVPDPSTRITLLEILE 274 (370)
T ss_pred cCCHHHHHHHHHHcCCCcccCCCHHHHhh
Confidence 2 678999999999999999999998874
|
|
| >cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.3e-21 Score=202.69 Aligned_cols=191 Identities=19% Similarity=0.276 Sum_probs=136.0
Q ss_pred eeecCCCceEEEEEEec-CCcEEEEEEEecCCC-CHHHHHHHHHHHHHHhc----------------------------C
Q 042825 424 NRLGRGGVGTVYKGELK-DGTEVGVKRMELGSV-TEQGIAQFESEITVLTK----------------------------G 473 (631)
Q Consensus 424 ~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~-~~~~~~~~~~Ei~~l~~----------------------------g 473 (631)
+.||+|+||.||+++.. +|+.||+|++..... .......+.+|++++.+ |
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCC
Confidence 46999999999999965 589999999975422 22345567788888765 4
Q ss_pred ChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCCcccccc
Q 042825 474 TLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENGKHSILT 529 (631)
Q Consensus 474 sL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~~~~~~~ 529 (631)
+|..++.. ...+.+.....++.+++.| +.+||+|||+++...... ....
T Consensus 81 ~L~~~l~~-----~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~--~~~~ 153 (323)
T cd05595 81 ELFFHLSR-----ERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG--ATMK 153 (323)
T ss_pred cHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEEcCCCCEEecccHHhccccCCC--Cccc
Confidence 44444421 2357777777887777765 467899999987642111 1233
Q ss_pred ccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHhHhhhcCChhHHHHHHhhcCCC
Q 042825 530 KVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQKMHKNHDTFQMAIDKTIQLD 609 (631)
Q Consensus 530 ~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~id~~L~~d 609 (631)
...||+.|+|||++.+..++.++|||||||++|||++|+.||.......................++++.+++.++|..|
T Consensus 154 ~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~li~~~L~~d 233 (323)
T cd05595 154 TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKSLLAGLLKKD 233 (323)
T ss_pred cccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHccCC
Confidence 46799999999999988999999999999999999999999975433211111111111111223578899999999999
Q ss_pred hhhHH-----hHHHHHH
Q 042825 610 EENLA-----NVSTVAE 621 (631)
Q Consensus 610 ~~~r~-----~~~~vl~ 621 (631)
|.+|+ ++.++++
T Consensus 234 P~~R~~~~~~~~~~~l~ 250 (323)
T cd05595 234 PKQRLGGGPSDAKEVME 250 (323)
T ss_pred HHHhCCCCCCCHHHHHc
Confidence 99997 6776654
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in |
| >PTZ00284 protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.3e-21 Score=212.99 Aligned_cols=196 Identities=19% Similarity=0.218 Sum_probs=134.9
Q ss_pred HHHhhcCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc------------------
Q 042825 412 VLRNATNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK------------------ 472 (631)
Q Consensus 412 ~l~~~t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~------------------ 472 (631)
++...+++|...+.||+|+||+||+|+.. .++.||||+++... ...+++..|++++.+
T Consensus 123 ~~~~~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~ 199 (467)
T PTZ00284 123 DIDVSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP---KYTRDAKIEIQFMEKVRQADPADRFPLMKIQRY 199 (467)
T ss_pred ccccCCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecch---hhHHHHHHHHHHHHHHhhcCcccCcceeeeEEE
Confidence 34456789999999999999999999865 58899999996431 122344455554433
Q ss_pred ----------------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC-------------------------C-----
Q 042825 473 ----------------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG-------------------------D----- 506 (631)
Q Consensus 473 ----------------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g-------------------------~----- 506 (631)
+++.+++.. ...+.+.....|+.+++.| +
T Consensus 200 ~~~~~~~~~iv~~~~g~~l~~~l~~-----~~~l~~~~~~~i~~qi~~aL~yLH~~~gIiHrDlKP~NILl~~~~~~~~~ 274 (467)
T PTZ00284 200 FQNETGHMCIVMPKYGPCLLDWIMK-----HGPFSHRHLAQIIFQTGVALDYFHTELHLMHTDLKPENILMETSDTVVDP 274 (467)
T ss_pred EEcCCceEEEEEeccCCCHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEecCCccccc
Confidence 222222211 1346777777777666554 1
Q ss_pred -----------CcEEEeeccccccCCCCccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCC
Q 042825 507 -----------DMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATH 575 (631)
Q Consensus 507 -----------~~kl~DFGla~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~ 575 (631)
.+||+|||.+.... ......+||+.|+|||++.+..|+.++|||||||++|||++|+.||++..
T Consensus 275 ~~~~~~~~~~~~vkl~DfG~~~~~~-----~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~ 349 (467)
T PTZ00284 275 VTNRALPPDPCRVRICDLGGCCDER-----HSRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTHD 349 (467)
T ss_pred ccccccCCCCceEEECCCCccccCc-----cccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 27899999886432 12345689999999999999999999999999999999999999998643
Q ss_pred CChHHHHHHHH--------HhHh-----------------------------------hhcCChhHHHHHHhhcCCChhh
Q 042825 576 SDPEYIIHLAT--------WFQK-----------------------------------MHKNHDTFQMAIDKTIQLDEEN 612 (631)
Q Consensus 576 ~~~~~~~~l~~--------~~~~-----------------------------------~~~~~~~l~~~id~~L~~d~~~ 612 (631)
..+ ....+.. |... .....+.+.|+|.+||..||.+
T Consensus 350 ~~~-~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~ 428 (467)
T PTZ00284 350 NLE-HLHLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQK 428 (467)
T ss_pred hHH-HHHHHHHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhh
Confidence 221 1101100 1000 0001245679999999999999
Q ss_pred HHhHHHHHH
Q 042825 613 LANVSTVAE 621 (631)
Q Consensus 613 r~~~~~vl~ 621 (631)
|+++.++++
T Consensus 429 R~ta~e~L~ 437 (467)
T PTZ00284 429 RLNARQMTT 437 (467)
T ss_pred CCCHHHHhc
Confidence 999999875
|
|
| >cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.4e-21 Score=203.27 Aligned_cols=188 Identities=19% Similarity=0.264 Sum_probs=134.0
Q ss_pred ecCCCceEEEEEEec-CCcEEEEEEEecCCC-CHHHHHHHHHHHHHHhc----------------------------CCh
Q 042825 426 LGRGGVGTVYKGELK-DGTEVGVKRMELGSV-TEQGIAQFESEITVLTK----------------------------GTL 475 (631)
Q Consensus 426 iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~-~~~~~~~~~~Ei~~l~~----------------------------gsL 475 (631)
||+|+||.||+|+.. +++.||+|++..... .......+.+|++++.+ |+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L 80 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGEL 80 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcH
Confidence 699999999999976 588999999975321 23345677889888865 556
Q ss_pred hHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCCcccccccc
Q 042825 476 GRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENGKHSILTKV 531 (631)
Q Consensus 476 ~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~~~~~~~~~ 531 (631)
.+++.. ...+++.....++.+++.| +.+||+|||+++..... .......
T Consensus 81 ~~~l~~-----~~~~~~~~~~~~~~qi~~~l~~lH~~~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~--~~~~~~~ 153 (312)
T cd05585 81 FHHLQR-----EGRFDLSRARFYTAELLCALENLHKFNVIYRDLKPENILLDYQGHIALCDFGLCKLNMKD--DDKTNTF 153 (312)
T ss_pred HHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHeEECCCCcEEEEECcccccCccC--CCccccc
Confidence 555532 2347777777777777765 45789999999864321 1223456
Q ss_pred ccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHhHhhhcCChhHHHHHHhhcCCChh
Q 042825 532 AGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQKMHKNHDTFQMAIDKTIQLDEE 611 (631)
Q Consensus 532 ~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~id~~L~~d~~ 611 (631)
.||+.|+|||++.+..++.++|||||||++|||++|+.||............+..........++++.+++.++|..||.
T Consensus 154 ~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~ 233 (312)
T cd05585 154 CGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENVNEMYRKILQEPLRFPDGFDRDAKDLLIGLLSRDPT 233 (312)
T ss_pred cCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCHHHHHHHHHcCCCCCCCcCCHHHHHHHHHHcCCCHH
Confidence 79999999999999899999999999999999999999997543221111111111111112346889999999999999
Q ss_pred hHHh---HHHHH
Q 042825 612 NLAN---VSTVA 620 (631)
Q Consensus 612 ~r~~---~~~vl 620 (631)
+|++ +.+++
T Consensus 234 ~R~~~~~~~e~l 245 (312)
T cd05585 234 RRLGYNGAQEIK 245 (312)
T ss_pred HcCCCCCHHHHH
Confidence 9974 45544
|
Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl |
| >PTZ00263 protein kinase A catalytic subunit; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=9.2e-22 Score=206.26 Aligned_cols=192 Identities=20% Similarity=0.285 Sum_probs=137.1
Q ss_pred CCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCC-CHHHHHHHHHHHHHHhc-----------------------
Q 042825 418 NNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSV-TEQGIAQFESEITVLTK----------------------- 472 (631)
Q Consensus 418 ~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~-~~~~~~~~~~Ei~~l~~----------------------- 472 (631)
++|...+.||+|+||.||+|+.+ +++.||||++..... .....+.+.+|++++.+
T Consensus 18 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 97 (329)
T PTZ00263 18 SDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFLL 97 (329)
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEEE
Confidence 57888999999999999999976 589999999975422 22345678889888766
Q ss_pred -----CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCC
Q 042825 473 -----GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENG 523 (631)
Q Consensus 473 -----gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~ 523 (631)
|+|.+++.. ...+.+.....++.+++.| +.+||+|||+++.....
T Consensus 98 e~~~~~~L~~~l~~-----~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~- 171 (329)
T PTZ00263 98 EFVVGGELFTHLRK-----AGRFPNDVAKFYHAELVLAFEYLHSKDIIYRDLKPENLLLDNKGHVKVTDFGFAKKVPDR- 171 (329)
T ss_pred cCCCCChHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEECCCCCEEEeeccCceEcCCC-
Confidence 455555532 1234555555555555544 56899999999876421
Q ss_pred ccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHH-HhHhhhcCChhHHHHH
Q 042825 524 KHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLAT-WFQKMHKNHDTFQMAI 602 (631)
Q Consensus 524 ~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~-~~~~~~~~~~~l~~~i 602 (631)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||.+..... ....+.. ........+.++++++
T Consensus 172 ----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~-~~~~i~~~~~~~p~~~~~~~~~li 246 (329)
T PTZ00263 172 ----TFTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFR-IYEKILAGRLKFPNWFDGRARDLV 246 (329)
T ss_pred ----cceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCHHH-HHHHHhcCCcCCCCCCCHHHHHHH
Confidence 123579999999999999899999999999999999999999997543211 1111111 1111111346789999
Q ss_pred HhhcCCChhhHHh-----HHHHH
Q 042825 603 DKTIQLDEENLAN-----VSTVA 620 (631)
Q Consensus 603 d~~L~~d~~~r~~-----~~~vl 620 (631)
.++|..||.+|++ +.+++
T Consensus 247 ~~~L~~dP~~R~~~~~~~~~~ll 269 (329)
T PTZ00263 247 KGLLQTDHTKRLGTLKGGVADVK 269 (329)
T ss_pred HHHhhcCHHHcCCCCCCCHHHHh
Confidence 9999999999975 56655
|
|
| >cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.8e-21 Score=204.02 Aligned_cols=191 Identities=18% Similarity=0.256 Sum_probs=136.7
Q ss_pred eeecCCCceEEEEEEec-CCcEEEEEEEecCCC-CHHHHHHHHHHHHHHhc----------------------------C
Q 042825 424 NRLGRGGVGTVYKGELK-DGTEVGVKRMELGSV-TEQGIAQFESEITVLTK----------------------------G 473 (631)
Q Consensus 424 ~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~-~~~~~~~~~~Ei~~l~~----------------------------g 473 (631)
+.||+|+||.||+++.. +|+.||||++..... .......+.+|++++.+ |
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g 80 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGG 80 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCC
Confidence 46999999999999865 589999999975432 22345678889888765 4
Q ss_pred ChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCCcccccc
Q 042825 474 TLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENGKHSILT 529 (631)
Q Consensus 474 sL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~~~~~~~ 529 (631)
+|..++.. ...+.+.....++.+++.| +.+||+|||+++..... .....
T Consensus 81 ~L~~~l~~-----~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~--~~~~~ 153 (328)
T cd05593 81 ELFFHLSR-----ERVFSEDRTRFYGAEIVSALDYLHSGKIVYRDLKLENLMLDKDGHIKITDFGLCKEGITD--AATMK 153 (328)
T ss_pred CHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeEECCCCcEEEecCcCCccCCCc--ccccc
Confidence 44444421 2357788888888777765 46789999999864211 12234
Q ss_pred ccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHhHhhhcCChhHHHHHHhhcCCC
Q 042825 530 KVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQKMHKNHDTFQMAIDKTIQLD 609 (631)
Q Consensus 530 ~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~id~~L~~d 609 (631)
..+||+.|+|||++.+..++.++|||||||++|||++|+.||.......................+.++.+++.++|..|
T Consensus 154 ~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~li~~~L~~d 233 (328)
T cd05593 154 TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEDIKFPRTLSADAKSLLSGLLIKD 233 (328)
T ss_pred cccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHHHHHHHhccCCccCCCCCCHHHHHHHHHHcCCC
Confidence 56799999999999988999999999999999999999999975432211111111111111123468999999999999
Q ss_pred hhhHH-----hHHHHHH
Q 042825 610 EENLA-----NVSTVAE 621 (631)
Q Consensus 610 ~~~r~-----~~~~vl~ 621 (631)
|.+|+ ++.++++
T Consensus 234 P~~R~~~~~~~~~~il~ 250 (328)
T cd05593 234 PNKRLGGGPDDAKEIMR 250 (328)
T ss_pred HHHcCCCCCCCHHHHhc
Confidence 99996 7777664
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate |
| >KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.86 E-value=3.9e-22 Score=204.15 Aligned_cols=205 Identities=18% Similarity=0.284 Sum_probs=155.4
Q ss_pred cCCcccceeecCCCceEEEEEEe-cCCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc-----------------------
Q 042825 417 TNNFSEENRLGRGGVGTVYKGEL-KDGTEVGVKRMELGSVTEQGIAQFESEITVLTK----------------------- 472 (631)
Q Consensus 417 t~~f~~~~~iG~G~fg~Vyk~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~----------------------- 472 (631)
..-|+..+.||+|.|+.|-.+++ -+|..||||++.+.++.......+..|+..|+-
T Consensus 17 AGLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLiL 96 (864)
T KOG4717|consen 17 AGLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLIL 96 (864)
T ss_pred eeeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEEE
Confidence 34567778999999999999984 379999999999888777666778888877753
Q ss_pred -----CChhHHhHhhh------------hcCCCCCCHHHHHHHHHHhhcC---------CCcEEEeeccccccCCCCccc
Q 042825 473 -----GTLGRHLFNWE------------EEGLEPLEWNTRLNIALDVARG---------DDMRVADFGLVRLVPENGKHS 526 (631)
Q Consensus 473 -----gsL~~~L~~~~------------~~~~~~L~~~~~~~I~~~ia~g---------~~~kl~DFGla~~~~~~~~~~ 526 (631)
|+|++|+.... .+....++|+|.+++++...+. +-+|++|||++-.+.++.
T Consensus 97 ELGD~GDl~DyImKHe~Gl~E~La~kYF~QI~~AI~YCHqLHVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~PG~--- 173 (864)
T KOG4717|consen 97 ELGDGGDLFDYIMKHEEGLNEDLAKKYFAQIVHAISYCHQLHVVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQPGK--- 173 (864)
T ss_pred EecCCchHHHHHHhhhccccHHHHHHHHHHHHHHHHHHhhhhhhcccCCcceeEEeeecCceEeeeccccccCCCcc---
Confidence 78888885422 2223345666666666555544 456899999997665332
Q ss_pred cccccccCcccccccccccCCCC-chhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHhHhhhcCChhHHHHHHhh
Q 042825 527 ILTKVAGTFGYLAPEYIVTGRIT-AKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQKMHKNHDTFQMAIDKT 605 (631)
Q Consensus 527 ~~~~~~gt~~Y~aPE~~~~~~~~-~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~id~~ 605 (631)
..++.||+..|-|||++.+..|+ +++||||+||+||-|++|+.||...++.+..-..|.-........+.+++++|..|
T Consensus 174 kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSETLTmImDCKYtvPshvS~eCrdLI~sM 253 (864)
T KOG4717|consen 174 KLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSETLTMIMDCKYTVPSHVSKECRDLIQSM 253 (864)
T ss_pred hhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchhhhhhhhcccccCchhhhHHHHHHHHHH
Confidence 35678999999999999999987 58999999999999999999999776654333333322333334467899999999
Q ss_pred cCCChhhHHhHHHHHHHHH
Q 042825 606 IQLDEENLANVSTVAELGD 624 (631)
Q Consensus 606 L~~d~~~r~~~~~vl~lal 624 (631)
|..||..|.++.++..-++
T Consensus 254 LvRdPkkRAslEeI~s~~W 272 (864)
T KOG4717|consen 254 LVRDPKKRASLEEIVSTSW 272 (864)
T ss_pred HhcCchhhccHHHHhcccc
Confidence 9999999999998765443
|
|
| >cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Probab=99.86 E-value=4.6e-21 Score=201.46 Aligned_cols=197 Identities=17% Similarity=0.286 Sum_probs=138.8
Q ss_pred CcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc-------------------------
Q 042825 419 NFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK------------------------- 472 (631)
Q Consensus 419 ~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~------------------------- 472 (631)
+|+..+.||+|+||.||+|+.. +|+.||||++...........++.+|++++.+
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~ 80 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIY 80 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEE
Confidence 4778899999999999999965 58999999987543333345678899988875
Q ss_pred -------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCC
Q 042825 473 -------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPE 521 (631)
Q Consensus 473 -------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~ 521 (631)
+++.+++. ....+++.....++.++++| +.+||+|||+++....
T Consensus 81 lv~e~~~~~L~~~l~-----~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~~~ 155 (338)
T cd07859 81 VVFELMESDLHQVIK-----ANDDLTPEHHQFFLYQLLRALKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFN 155 (338)
T ss_pred EEEecCCCCHHHHHH-----hcccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCcEEEccCcccccccc
Confidence 11222221 12357888888888888876 4578999999986532
Q ss_pred CCc-cccccccccCccccccccccc--CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHH------------
Q 042825 522 NGK-HSILTKVAGTFGYLAPEYIVT--GRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLAT------------ 586 (631)
Q Consensus 522 ~~~-~~~~~~~~gt~~Y~aPE~~~~--~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~------------ 586 (631)
... ........||..|+|||++.+ ..++.++|||||||++|||+||+.||.+...... ...+..
T Consensus 156 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~-~~~~~~~~~~~~~~~~~~ 234 (338)
T cd07859 156 DTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQ-LDLITDLLGTPSPETISR 234 (338)
T ss_pred ccCccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHH-HHHHHHHhCCCCHHHHHH
Confidence 211 112244679999999999865 5789999999999999999999999975432110 000000
Q ss_pred --------Hh------------HhhhcCChhHHHHHHhhcCCChhhHHhHHHHHH
Q 042825 587 --------WF------------QKMHKNHDTFQMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 587 --------~~------------~~~~~~~~~l~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
.. ......+..+.+++.+++..+|.+|+++.++++
T Consensus 235 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~ 289 (338)
T cd07859 235 VRNEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALA 289 (338)
T ss_pred hhhhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhc
Confidence 00 000112356789999999999999999998875
|
Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos |
| >cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1 | Back alignment and domain information |
|---|
Probab=99.86 E-value=7.3e-21 Score=197.01 Aligned_cols=203 Identities=20% Similarity=0.327 Sum_probs=143.9
Q ss_pred CCcccceeecCCCceEEEEEEecC-----------------CcEEEEEEEecCCCCHHHHHHHHHHHHHHhc--------
Q 042825 418 NNFSEENRLGRGGVGTVYKGELKD-----------------GTEVGVKRMELGSVTEQGIAQFESEITVLTK-------- 472 (631)
Q Consensus 418 ~~f~~~~~iG~G~fg~Vyk~~~~~-----------------g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~-------- 472 (631)
++|...+.||+|+||.||+|++++ +..||+|.+.... ......+|.+|++++.+
T Consensus 5 ~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~ 83 (304)
T cd05096 5 GHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDA-NKNARNDFLKEVKILSRLKDPNIIR 83 (304)
T ss_pred hhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCC-CHHHHHHHHHHHHHHhhcCCCCeeE
Confidence 467788999999999999998532 3479999987543 34456789999998865
Q ss_pred --------------------CChhHHhHhhhh--------------cCCCCCCHHHHHHHHHHhhcC-------------
Q 042825 473 --------------------GTLGRHLFNWEE--------------EGLEPLEWNTRLNIALDVARG------------- 505 (631)
Q Consensus 473 --------------------gsL~~~L~~~~~--------------~~~~~L~~~~~~~I~~~ia~g------------- 505 (631)
|+|.+++..... .....+.|.....++.+++.|
T Consensus 84 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~ivH~d 163 (304)
T cd05096 84 LLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLNFVHRD 163 (304)
T ss_pred EEEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCCccccC
Confidence 567666643210 111347888888888888776
Q ss_pred -----------CCcEEEeeccccccCCCCccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHc--CCCCCC
Q 042825 506 -----------DDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT--GRKVVD 572 (631)
Q Consensus 506 -----------~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~Ellt--G~~P~~ 572 (631)
+.+||+|||+++.+.............++..|+|||++....++.++|||||||++|||++ +..||.
T Consensus 164 lkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~ 243 (304)
T cd05096 164 LATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLCKEQPYG 243 (304)
T ss_pred cchhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHccCCCCCC
Confidence 4578999999987643222222334456889999999988899999999999999999987 567776
Q ss_pred CCCCChHHHHHHHHHhHh---------hhcCChhHHHHHHhhcCCChhhHHhHHHHHHH
Q 042825 573 ATHSDPEYIIHLATWFQK---------MHKNHDTFQMAIDKTIQLDEENLANVSTVAEL 622 (631)
Q Consensus 573 ~~~~~~~~~~~l~~~~~~---------~~~~~~~l~~~id~~L~~d~~~r~~~~~vl~l 622 (631)
...... .......+... ....+..+.+++.+|+..+|++||++.++.+.
T Consensus 244 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~~ 301 (304)
T cd05096 244 ELTDEQ-VIENAGEFFRDQGRQVYLFRPPPCPQGLYELMLQCWSRDCRERPSFSDIHAF 301 (304)
T ss_pred cCCHHH-HHHHHHHHhhhccccccccCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHH
Confidence 543221 11112121111 11224578999999999999999999998664
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k |
| >KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.86 E-value=6e-22 Score=209.51 Aligned_cols=192 Identities=27% Similarity=0.412 Sum_probs=146.7
Q ss_pred CCcccceeecCCCceEEEEEEecC--C--cE-EEEEEEec-CCCCHHHHHHHHHHHHHHhc-------------------
Q 042825 418 NNFSEENRLGRGGVGTVYKGELKD--G--TE-VGVKRMEL-GSVTEQGIAQFESEITVLTK------------------- 472 (631)
Q Consensus 418 ~~f~~~~~iG~G~fg~Vyk~~~~~--g--~~-vAvK~l~~-~~~~~~~~~~~~~Ei~~l~~------------------- 472 (631)
++....++||+|+||.||+|+++. + .. ||||..+. ........++|.+|.++|.+
T Consensus 157 ~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~~~Pl 236 (474)
T KOG0194|consen 157 SDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVLEEPL 236 (474)
T ss_pred cCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCcc
Confidence 344455899999999999999763 3 23 89999885 33567788999999999987
Q ss_pred ---------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeecccccc
Q 042825 473 ---------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLV 519 (631)
Q Consensus 473 ---------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~ 519 (631)
|+|.++|.. ....++..+++..++++|.| ..+||+|||+++.-
T Consensus 237 ~ivmEl~~gGsL~~~L~k----~~~~v~~~ek~~~~~~AA~Gl~YLh~k~~IHRDIAARNcL~~~~~~vKISDFGLs~~~ 312 (474)
T KOG0194|consen 237 MLVMELCNGGSLDDYLKK----NKKSLPTLEKLRFCYDAARGLEYLHSKNCIHRDIAARNCLYSKKGVVKISDFGLSRAG 312 (474)
T ss_pred EEEEEecCCCcHHHHHHh----CCCCCCHHHHHHHHHHHHhHHHHHHHCCCcchhHhHHHheecCCCeEEeCccccccCC
Confidence 899999963 22368999999999999998 33599999999864
Q ss_pred CCCCcccccc-ccccCcccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChHHHHHHHHHh-H----hhh
Q 042825 520 PENGKHSILT-KVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT-GRKVVDATHSDPEYIIHLATWF-Q----KMH 592 (631)
Q Consensus 520 ~~~~~~~~~~-~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~Ellt-G~~P~~~~~~~~~~~~~l~~~~-~----~~~ 592 (631)
. ...... ...-++.|+|||.+....|+.++|||||||++||+++ |..||.+.... .+..++ . ...
T Consensus 313 ~---~~~~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~-----~v~~kI~~~~~r~~~ 384 (474)
T KOG0194|consen 313 S---QYVMKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNY-----EVKAKIVKNGYRMPI 384 (474)
T ss_pred c---ceeeccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHH-----HHHHHHHhcCccCCC
Confidence 2 111111 2246789999999999999999999999999999999 88999876533 223333 1 111
Q ss_pred --cCChhHHHHHHhhcCCChhhHHhHHHHHH
Q 042825 593 --KNHDTFQMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 593 --~~~~~l~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
..+..+..+++++...+|++|+++.++.+
T Consensus 385 ~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~ 415 (474)
T KOG0194|consen 385 PSKTPKELAKVMKQCWKKDPEDRPTMSTIKK 415 (474)
T ss_pred CCCCHHHHHHHHHHhccCChhhccCHHHHHH
Confidence 12357888999999999999999987654
|
|
| >cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase | Back alignment and domain information |
|---|
Probab=99.86 E-value=6.9e-21 Score=197.18 Aligned_cols=198 Identities=19% Similarity=0.268 Sum_probs=138.4
Q ss_pred cCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc-----------------------
Q 042825 417 TNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK----------------------- 472 (631)
Q Consensus 417 t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~----------------------- 472 (631)
.++|+..+.||+|+||.||+|+.. +++.||||++...... .....+.+|++++++
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 82 (303)
T cd07869 4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEE-GTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVF 82 (303)
T ss_pred cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEecccccc-ccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEE
Confidence 467999999999999999999976 6899999998754321 223456788888765
Q ss_pred ----CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCCc
Q 042825 473 ----GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENGK 524 (631)
Q Consensus 473 ----gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~~ 524 (631)
+++.+++. .....+.......++.+++.| +.+||+|||+++.....
T Consensus 83 e~~~~~l~~~~~----~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~-- 156 (303)
T cd07869 83 EYVHTDLCQYMD----KHPGGLHPENVKLFLFQLLRGLSYIHQRYILHRDLKPQNLLISDTGELKLADFGLARAKSVP-- 156 (303)
T ss_pred ECCCcCHHHHHH----hCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECCCCcceeccCC--
Confidence 44444442 222346666667777777665 45799999999765311
Q ss_pred cccccccccCccccccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHH---------HhH-----
Q 042825 525 HSILTKVAGTFGYLAPEYIVT-GRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLAT---------WFQ----- 589 (631)
Q Consensus 525 ~~~~~~~~gt~~Y~aPE~~~~-~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~---------~~~----- 589 (631)
........||+.|+|||++.+ ..++.++||||+||++|||++|+.||.+..........+.. |..
T Consensus 157 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (303)
T cd07869 157 SHTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPGVHSLP 236 (303)
T ss_pred CccCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCCChhhccchhhcc
Confidence 122344578999999998865 45889999999999999999999999865332111111110 000
Q ss_pred -------------------hhhcCChhHHHHHHhhcCCChhhHHhHHHHHH
Q 042825 590 -------------------KMHKNHDTFQMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 590 -------------------~~~~~~~~l~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
.......++.++++++|+.||.+|+++.++++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~ 287 (303)
T cd07869 237 HFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALS 287 (303)
T ss_pred ccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhc
Confidence 00011246789999999999999999998875
|
Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an |
| >cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.1e-21 Score=203.90 Aligned_cols=193 Identities=22% Similarity=0.335 Sum_probs=142.5
Q ss_pred CCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCC-HHHHHHHHHHHHHHhc-----------------------
Q 042825 418 NNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVT-EQGIAQFESEITVLTK----------------------- 472 (631)
Q Consensus 418 ~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~-~~~~~~~~~Ei~~l~~----------------------- 472 (631)
++|+..+.||+|+||.||+|+.. +++.||||++...... ....+.+.+|++++..
T Consensus 1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~ 80 (333)
T cd05600 1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAM 80 (333)
T ss_pred CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEE
Confidence 46888999999999999999976 4899999999754321 1244668888888765
Q ss_pred -----CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCC
Q 042825 473 -----GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENG 523 (631)
Q Consensus 473 -----gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~ 523 (631)
|+|.+++.. ...+.+.....++.+++.| +.+||+|||+++....
T Consensus 81 e~~~g~~L~~~l~~-----~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~-- 153 (333)
T cd05600 81 EYVPGGDFRTLLNN-----LGVLSEDHARFYMAEMFEAVDALHELGYIHRDLKPENFLIDASGHIKLTDFGLSKGIVT-- 153 (333)
T ss_pred eCCCCCCHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCCEEEEeCcCCccccc--
Confidence 555555532 2346666666666666554 5689999999986532
Q ss_pred ccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHhHhh---h------cC
Q 042825 524 KHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQKM---H------KN 594 (631)
Q Consensus 524 ~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~~~~---~------~~ 594 (631)
......||+.|+|||++.+..++.++|||||||++|||++|+.||......+ ....+..|.... . ..
T Consensus 154 ---~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~ 229 (333)
T cd05600 154 ---YANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNE-TWENLKYWKETLQRPVYDDPRFNL 229 (333)
T ss_pred ---ccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHH-HHHHHHhccccccCCCCCcccccc
Confidence 2345679999999999998899999999999999999999999998654322 222333332111 1 12
Q ss_pred ChhHHHHHHhhcCCChhhHHhHHHHHH
Q 042825 595 HDTFQMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 595 ~~~l~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
++++.+++.+|+..+|..|+++.++++
T Consensus 230 s~~~~~li~~~l~~~~~rr~s~~~ll~ 256 (333)
T cd05600 230 SDEAWDLITKLINDPSRRFGSLEDIKN 256 (333)
T ss_pred CHHHHHHHHHHhhChhhhcCCHHHHHh
Confidence 567899999999988888999988775
|
Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. |
| >KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.6e-22 Score=209.26 Aligned_cols=197 Identities=22% Similarity=0.405 Sum_probs=139.8
Q ss_pred CcCHHHHHhhcCCcccceeecCCCceEEEEEEecCCcEEEEEEEecCCCCH-HHHHHHHHH------------------H
Q 042825 407 AIPIQVLRNATNNFSEENRLGRGGVGTVYKGELKDGTEVGVKRMELGSVTE-QGIAQFESE------------------I 467 (631)
Q Consensus 407 ~~~~~~l~~~t~~f~~~~~iG~G~fg~Vyk~~~~~g~~vAvK~l~~~~~~~-~~~~~~~~E------------------i 467 (631)
+++|++|.+ .+-||.|+.|.||+|+++ ++.||||+++.-+-++ +..+.+..+ +
T Consensus 120 eiPFe~IsE-------LeWlGSGaQGAVF~Grl~-netVAVKKV~elkETdIKHLRkLkH~NII~FkGVCtqsPcyCIiM 191 (904)
T KOG4721|consen 120 EIPFEEISE-------LEWLGSGAQGAVFLGRLH-NETVAVKKVRELKETDIKHLRKLKHPNIITFKGVCTQSPCYCIIM 191 (904)
T ss_pred cCCHHHhhh-------hhhhccCcccceeeeecc-CceehhHHHhhhhhhhHHHHHhccCcceeeEeeeecCCceeEEee
Confidence 567777654 478999999999999996 6889999886432111 111111000 0
Q ss_pred HHHhcCChhHHh-----------HhhhhcCCCCCCHHHHHHHHHHhhcC--------CCcEEEeeccccccCCCCccccc
Q 042825 468 TVLTKGTLGRHL-----------FNWEEEGLEPLEWNTRLNIALDVARG--------DDMRVADFGLVRLVPENGKHSIL 528 (631)
Q Consensus 468 ~~l~~gsL~~~L-----------~~~~~~~~~~L~~~~~~~I~~~ia~g--------~~~kl~DFGla~~~~~~~~~~~~ 528 (631)
+...+|-|...| .+|..+....+.|.|..+|++...+. +.+||+|||.++.+.+. ...
T Consensus 192 EfCa~GqL~~VLka~~~itp~llv~Wsk~IA~GM~YLH~hKIIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~---STk 268 (904)
T KOG4721|consen 192 EFCAQGQLYEVLKAGRPITPSLLVDWSKGIAGGMNYLHLHKIIHRDLKSPNILISYDDVVKISDFGTSKELSDK---STK 268 (904)
T ss_pred eccccccHHHHHhccCccCHHHHHHHHHHhhhhhHHHHHhhHhhhccCCCceEeeccceEEeccccchHhhhhh---hhh
Confidence 111115555544 45666666778888888888877665 56899999999987422 345
Q ss_pred cccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHh--------HhhhcCChhHHH
Q 042825 529 TKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWF--------QKMHKNHDTFQM 600 (631)
Q Consensus 529 ~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~--------~~~~~~~~~l~~ 600 (631)
..++||..|||||++.....++|+||||||||||||+||+-||.+.... .+ -|- .....-.+.++-
T Consensus 269 MSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdss-----AI-IwGVGsNsL~LpvPstcP~Gfkl 342 (904)
T KOG4721|consen 269 MSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSS-----AI-IWGVGSNSLHLPVPSTCPDGFKL 342 (904)
T ss_pred hhhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchh-----ee-EEeccCCcccccCcccCchHHHH
Confidence 6789999999999999999999999999999999999999999754321 11 111 111112467888
Q ss_pred HHHhhcCCChhhHHhHHHHH
Q 042825 601 AIDKTIQLDEENLANVSTVA 620 (631)
Q Consensus 601 ~id~~L~~d~~~r~~~~~vl 620 (631)
++.+++...|..||++.+++
T Consensus 343 L~Kqcw~sKpRNRPSFrqil 362 (904)
T KOG4721|consen 343 LLKQCWNSKPRNRPSFRQIL 362 (904)
T ss_pred HHHHHHhcCCCCCccHHHHH
Confidence 99999998899999988765
|
|
| >cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.4e-21 Score=202.61 Aligned_cols=191 Identities=19% Similarity=0.273 Sum_probs=135.2
Q ss_pred CcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCC-CHHHHHHHHHHHHHHhc------------------------
Q 042825 419 NFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSV-TEQGIAQFESEITVLTK------------------------ 472 (631)
Q Consensus 419 ~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~-~~~~~~~~~~Ei~~l~~------------------------ 472 (631)
+|+..+.||+|+||+||+|+.+ +|+.||+|++..... .....+.+..|.+++..
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVM 80 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEE
Confidence 4677899999999999999865 589999999975422 12234556677766643
Q ss_pred -----CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCC
Q 042825 473 -----GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENG 523 (631)
Q Consensus 473 -----gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~ 523 (631)
|+|.+++. ....+++.....++.+++.| +.+||+|||+++......
T Consensus 81 Ey~~~g~L~~~i~-----~~~~l~~~~~~~i~~qi~~al~~lH~~~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~~ 155 (323)
T cd05615 81 EYVNGGDLMYHIQ-----QVGKFKEPQAVFYAAEISVGLFFLHRRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVDG 155 (323)
T ss_pred cCCCCCcHHHHHH-----HcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEeccccccccCCCC
Confidence 34444332 12357888888888888776 457899999998643221
Q ss_pred ccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHhHhhhcCChhHHHHHH
Q 042825 524 KHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQKMHKNHDTFQMAID 603 (631)
Q Consensus 524 ~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~id 603 (631)
.......||+.|+|||++.+..++.++||||+||++|||++|+.||.+..........+..........+.++.+++.
T Consensus 156 --~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~li~ 233 (323)
T cd05615 156 --VTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYPKSLSKEAVSICK 233 (323)
T ss_pred --ccccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCccCCHHHHHHHH
Confidence 123346799999999999988899999999999999999999999986533211111111111111123467899999
Q ss_pred hhcCCChhhHHhH
Q 042825 604 KTIQLDEENLANV 616 (631)
Q Consensus 604 ~~L~~d~~~r~~~ 616 (631)
++|..+|.+|.+.
T Consensus 234 ~~l~~~p~~R~~~ 246 (323)
T cd05615 234 GLMTKHPSKRLGC 246 (323)
T ss_pred HHcccCHhhCCCC
Confidence 9999999999763
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a |
| >cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor | Back alignment and domain information |
|---|
Probab=99.86 E-value=6.3e-21 Score=203.39 Aligned_cols=207 Identities=21% Similarity=0.310 Sum_probs=144.9
Q ss_pred cCCcccceeecCCCceEEEEEEec------CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc------------------
Q 042825 417 TNNFSEENRLGRGGVGTVYKGELK------DGTEVGVKRMELGSVTEQGIAQFESEITVLTK------------------ 472 (631)
Q Consensus 417 t~~f~~~~~iG~G~fg~Vyk~~~~------~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~------------------ 472 (631)
.++|+..+.||+|+||.||+|+.. ++..||||++..... ......+.+|++++..
T Consensus 37 ~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~~ 115 (374)
T cd05106 37 RDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAH-TDEREALMSELKILSHLGQHKNIVNLLGACTHGG 115 (374)
T ss_pred HHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCC-HHHHHHHHHHHHHHHhhccCCceeeEeeEecCCC
Confidence 447888999999999999999742 245799999975432 2345678889888753
Q ss_pred -----------CChhHHhHhhhh---------------------------------------------------------
Q 042825 473 -----------GTLGRHLFNWEE--------------------------------------------------------- 484 (631)
Q Consensus 473 -----------gsL~~~L~~~~~--------------------------------------------------------- 484 (631)
|+|.++++....
T Consensus 116 ~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (374)
T cd05106 116 PVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQSS 195 (374)
T ss_pred CeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCccccccccc
Confidence 566666542110
Q ss_pred --------cCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCCccccccccc
Q 042825 485 --------EGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENGKHSILTKVA 532 (631)
Q Consensus 485 --------~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~~~~~~~~~~ 532 (631)
.....+++.+..+|+.+++.| ..+||+|||+++...............
T Consensus 196 ~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~~~~~~~~ 275 (374)
T cd05106 196 DSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKNCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYVVKGNAR 275 (374)
T ss_pred cccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCCEEeccCchheEEEeCCCeEEEeeceeeeeccCCcceeeccCCC
Confidence 001247788888888888765 347899999998764222211222334
Q ss_pred cCcccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChHHHHHHHHHhHhh--hcCChhHHHHHHhhcCCC
Q 042825 533 GTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT-GRKVVDATHSDPEYIIHLATWFQKM--HKNHDTFQMAIDKTIQLD 609 (631)
Q Consensus 533 gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~Ellt-G~~P~~~~~~~~~~~~~l~~~~~~~--~~~~~~l~~~id~~L~~d 609 (631)
++..|||||++.+..++.++|||||||++|||++ |+.||............+..-.... ...+.++.+++.+|+..|
T Consensus 276 ~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~d 355 (374)
T cd05106 276 LPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNSKFYKMVKRGYQMSRPDFAPPEIYSIMKMCWNLE 355 (374)
T ss_pred CccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccHHHHHHHHcccCccCCCCCCHHHHHHHHHHcCCC
Confidence 5678999999988899999999999999999997 9999976543321111111100111 112468999999999999
Q ss_pred hhhHHhHHHHHHHHH
Q 042825 610 EENLANVSTVAELGD 624 (631)
Q Consensus 610 ~~~r~~~~~vl~lal 624 (631)
|.+||++.++++...
T Consensus 356 p~~RPs~~~l~~~l~ 370 (374)
T cd05106 356 PTERPTFSQISQLIQ 370 (374)
T ss_pred hhhCcCHHHHHHHHH
Confidence 999999999887643
|
Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti |
| >cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains | Back alignment and domain information |
|---|
Probab=99.86 E-value=6e-21 Score=192.00 Aligned_cols=197 Identities=23% Similarity=0.397 Sum_probs=147.1
Q ss_pred CcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc-------------------------
Q 042825 419 NFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK------------------------- 472 (631)
Q Consensus 419 ~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~------------------------- 472 (631)
+|+..+.||+|+||.||+|+.+ +++.|++|.+...........++.+|++++++
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEY 80 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEEe
Confidence 4777899999999999999976 58999999997655555667789999988876
Q ss_pred ---CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCCcc
Q 042825 473 ---GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENGKH 525 (631)
Q Consensus 473 ---gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~~~ 525 (631)
++|.+++... ....+++.....++.+++.+ +.++|+|||+++......
T Consensus 81 ~~~~~L~~~l~~~---~~~~~~~~~~~~i~~~l~~al~~lH~~~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~-- 155 (256)
T cd08529 81 AENGDLHKLLKMQ---RGRPLPEDQVWRFFIQILLGLAHLHSKKILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNT-- 155 (256)
T ss_pred CCCCcHHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEeCCCCEEEcccccceeccCcc--
Confidence 5666666431 23467888888888877765 457899999998764221
Q ss_pred ccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHH-HhHhhh-cCChhHHHHHH
Q 042825 526 SILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLAT-WFQKMH-KNHDTFQMAID 603 (631)
Q Consensus 526 ~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~-~~~~~~-~~~~~l~~~id 603 (631)
.......|+..|+|||+..+..++.++|||||||++|||++|+.||....... ....+.. ...... ....++.+++.
T Consensus 156 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~ 234 (256)
T cd08529 156 NFANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQGA-LILKIIRGVFPPVSQMYSQQLAQLID 234 (256)
T ss_pred chhhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHcCCCCCCccccCHHHHHHHH
Confidence 12234568899999999998889999999999999999999999997553211 1111111 111111 22467899999
Q ss_pred hhcCCChhhHHhHHHHHH
Q 042825 604 KTIQLDEENLANVSTVAE 621 (631)
Q Consensus 604 ~~L~~d~~~r~~~~~vl~ 621 (631)
+|+..+|++|+++.++++
T Consensus 235 ~~l~~~p~~Rp~~~~ll~ 252 (256)
T cd08529 235 QCLTKDYRQRPDTFQLLR 252 (256)
T ss_pred HHccCCcccCcCHHHHhh
Confidence 999999999999998875
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc |
| >cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=99.86 E-value=5.7e-21 Score=200.88 Aligned_cols=211 Identities=22% Similarity=0.309 Sum_probs=149.3
Q ss_pred CCcccceeecCCCceEEEEEEec------CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc-------------------
Q 042825 418 NNFSEENRLGRGGVGTVYKGELK------DGTEVGVKRMELGSVTEQGIAQFESEITVLTK------------------- 472 (631)
Q Consensus 418 ~~f~~~~~iG~G~fg~Vyk~~~~------~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~------------------- 472 (631)
++|+..+.||+|+||.||+|+.. +++.||+|+++... .....+.+..|++++.+
T Consensus 7 ~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~-~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~~ 85 (337)
T cd05054 7 DRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGA-TASEYKALMTELKILIHIGHHLNVVNLLGACTKPGG 85 (337)
T ss_pred HHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCC-CHHHHHHHHHHHHHHHhhccCcchhheeeeEecCCC
Confidence 46888899999999999999742 25789999987543 23345667788887754
Q ss_pred -----------CChhHHhHhhhhc--------------------------------------------------------
Q 042825 473 -----------GTLGRHLFNWEEE-------------------------------------------------------- 485 (631)
Q Consensus 473 -----------gsL~~~L~~~~~~-------------------------------------------------------- 485 (631)
|+|.+++......
T Consensus 86 ~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (337)
T cd05054 86 PLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDEL 165 (337)
T ss_pred CEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhhHH
Confidence 3444444211000
Q ss_pred CCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCCccccccccccCccccccc
Q 042825 486 GLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPE 541 (631)
Q Consensus 486 ~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~Y~aPE 541 (631)
....++|..+..++.+++.+ +.++|+|||+++.+.............++..|+|||
T Consensus 166 ~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE 245 (337)
T cd05054 166 YKEPLTLEDLISYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPE 245 (337)
T ss_pred hhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCCCccccCcH
Confidence 01367899999999888876 457899999998764332222223445678899999
Q ss_pred ccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChHHHHHHHHHhHhhh--cCChhHHHHHHhhcCCChhhHHhHHH
Q 042825 542 YIVTGRITAKVDVYSFGMILMDLIT-GRKVVDATHSDPEYIIHLATWFQKMH--KNHDTFQMAIDKTIQLDEENLANVST 618 (631)
Q Consensus 542 ~~~~~~~~~k~DVwS~GvvL~Ellt-G~~P~~~~~~~~~~~~~l~~~~~~~~--~~~~~l~~~id~~L~~d~~~r~~~~~ 618 (631)
++.+..++.++|||||||++|||++ |+.||.+....+.....+..+..... ....++.+++.+|+..+|++||++.+
T Consensus 246 ~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~e 325 (337)
T cd05054 246 SIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEEFCRRLKEGTRMRAPEYATPEIYSIMLDCWHNNPEDRPTFSE 325 (337)
T ss_pred HhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccHHHHHHHhccCCCCCCccCCHHHHHHHHHHccCChhhCcCHHH
Confidence 9999999999999999999999998 99999765433322222222221111 12467899999999999999999999
Q ss_pred HHHHHHhhhcc
Q 042825 619 VAELGDHCCAN 629 (631)
Q Consensus 619 vl~lal~C~~~ 629 (631)
+++..-...+.
T Consensus 326 ll~~l~~~~~~ 336 (337)
T cd05054 326 LVEILGDLLQE 336 (337)
T ss_pred HHHHHHHHHhc
Confidence 99887666553
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto |
| >cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit | Back alignment and domain information |
|---|
Probab=99.86 E-value=6.3e-21 Score=203.53 Aligned_cols=206 Identities=20% Similarity=0.289 Sum_probs=144.6
Q ss_pred cCCcccceeecCCCceEEEEEEe------cCCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc------------------
Q 042825 417 TNNFSEENRLGRGGVGTVYKGEL------KDGTEVGVKRMELGSVTEQGIAQFESEITVLTK------------------ 472 (631)
Q Consensus 417 t~~f~~~~~iG~G~fg~Vyk~~~------~~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~------------------ 472 (631)
.++|+..+.||+|+||.||+|+. .++..||||+++.... ....+.+.+|++++..
T Consensus 34 ~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~-~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~ 112 (375)
T cd05104 34 RNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAH-LTEREALMSELKVLSYLGNHINIVNLLGACTVGG 112 (375)
T ss_pred hHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcC-cHHHHHHHHHHHHHHHhcCCcceeeeeeeeccCC
Confidence 44688899999999999999973 2366899999875432 2345678889888753
Q ss_pred -----------CChhHHhHhhhh---------------------------------------------------------
Q 042825 473 -----------GTLGRHLFNWEE--------------------------------------------------------- 484 (631)
Q Consensus 473 -----------gsL~~~L~~~~~--------------------------------------------------------- 484 (631)
|+|.+++.....
T Consensus 113 ~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (375)
T cd05104 113 PTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRSG 192 (375)
T ss_pred cceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccccccc
Confidence 566666542100
Q ss_pred -------------cCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCCcccc
Q 042825 485 -------------EGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENGKHSI 527 (631)
Q Consensus 485 -------------~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~~~~~ 527 (631)
.....++|.....++.++++| ..+||+|||+++..........
T Consensus 193 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~ 272 (375)
T cd05104 193 SYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIRNDSNYVV 272 (375)
T ss_pred eecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCchhhEEEECCCcEEEecCccceeccCcccccc
Confidence 011257888889999988876 3468999999987643222112
Q ss_pred ccccccCcccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChHHHHHHHHHhHhh--hcCChhHHHHHHh
Q 042825 528 LTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT-GRKVVDATHSDPEYIIHLATWFQKM--HKNHDTFQMAIDK 604 (631)
Q Consensus 528 ~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~Ellt-G~~P~~~~~~~~~~~~~l~~~~~~~--~~~~~~l~~~id~ 604 (631)
.....++..|+|||++.+..++.++|||||||++|||++ |..||............+..-.+.. ...+.++.+++..
T Consensus 273 ~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 352 (375)
T cd05104 273 KGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDSKFYKMIKEGYRMLSPECAPSEMYDIMKS 352 (375)
T ss_pred cCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchHHHHHHHHhCccCCCCCCCCHHHHHHHHH
Confidence 223345678999999998899999999999999999998 8999976543321111111111111 1124678999999
Q ss_pred hcCCChhhHHhHHHHHHHH
Q 042825 605 TIQLDEENLANVSTVAELG 623 (631)
Q Consensus 605 ~L~~d~~~r~~~~~vl~la 623 (631)
|+..||++||++.++++..
T Consensus 353 cl~~dP~~RPs~~eil~~l 371 (375)
T cd05104 353 CWDADPLKRPTFKQIVQLI 371 (375)
T ss_pred HccCChhHCcCHHHHHHHH
Confidence 9999999999999998753
|
Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce |
| >cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase | Back alignment and domain information |
|---|
Probab=99.86 E-value=7.2e-21 Score=195.54 Aligned_cols=197 Identities=19% Similarity=0.308 Sum_probs=138.7
Q ss_pred CCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc------------------------
Q 042825 418 NNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK------------------------ 472 (631)
Q Consensus 418 ~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~------------------------ 472 (631)
++|...+.||+|+||.||+|+.+ +++.||+|+++.... ......+.+|++++.+
T Consensus 5 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 83 (288)
T cd07871 5 ETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHE-EGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVFE 83 (288)
T ss_pred ccceEeeEEecCCCEEEEEEEECCCCCEEEEEEeccccc-CCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEe
Confidence 56888999999999999999866 588999999875432 1233467788888876
Q ss_pred ---CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCCcc
Q 042825 473 ---GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENGKH 525 (631)
Q Consensus 473 ---gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~~~ 525 (631)
|++.+++. .....+.+.....++.+++.| +.+||+|||+++......
T Consensus 84 ~~~~~l~~~l~----~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~-- 157 (288)
T cd07871 84 YLDSDLKQYLD----NCGNLMSMHNVKIFMFQLLRGLSYCHKRKILHRDLKPQNLLINEKGELKLADFGLARAKSVPT-- 157 (288)
T ss_pred CCCcCHHHHHH----hcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEECcCcceeeccCCC--
Confidence 44444432 122346677777777777665 468999999998653211
Q ss_pred ccccccccCccccccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHH--------HHh--------
Q 042825 526 SILTKVAGTFGYLAPEYIVT-GRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLA--------TWF-------- 588 (631)
Q Consensus 526 ~~~~~~~gt~~Y~aPE~~~~-~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~--------~~~-------- 588 (631)
.......|++.|+|||++.+ ..++.++||||+||++|||+||+.||.+....+....... .|.
T Consensus 158 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (288)
T cd07871 158 KTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGITSNEEF 237 (288)
T ss_pred ccccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhccccchhh
Confidence 12334578999999998865 4689999999999999999999999976543221111110 010
Q ss_pred -H-------------hhhcCChhHHHHHHhhcCCChhhHHhHHHHHH
Q 042825 589 -Q-------------KMHKNHDTFQMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 589 -~-------------~~~~~~~~l~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
. .....+.+..+++.++|..||.+|+++.++++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~ 284 (288)
T cd07871 238 RSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALR 284 (288)
T ss_pred hccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 0 00112457889999999999999999998864
|
Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament |
| >KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.85 E-value=9.7e-22 Score=184.50 Aligned_cols=199 Identities=19% Similarity=0.276 Sum_probs=143.1
Q ss_pred hcCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCH-HHHHHHHHHHHHHhc---------------------
Q 042825 416 ATNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTE-QGIAQFESEITVLTK--------------------- 472 (631)
Q Consensus 416 ~t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~-~~~~~~~~Ei~~l~~--------------------- 472 (631)
+.++|+..+.||+|.||.||.|+.+ ++..||+|++.+.++.. .-..++.+|+++-++
T Consensus 20 ~l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riyL 99 (281)
T KOG0580|consen 20 TLDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIYL 99 (281)
T ss_pred chhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccceeEE
Confidence 3467899999999999999999965 58899999997754322 223567888876554
Q ss_pred -------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCC
Q 042825 473 -------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPE 521 (631)
Q Consensus 473 -------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~ 521 (631)
|.+...|.+. ....++.......+.++|.+ +.+||+|||.+...+
T Consensus 100 ilEya~~gel~k~L~~~---~~~~f~e~~~a~Yi~q~A~Al~y~h~k~VIhRdiKpenlLlg~~~~lkiAdfGwsV~~p- 175 (281)
T KOG0580|consen 100 ILEYAPRGELYKDLQEG---RMKRFDEQRAATYIKQLANALLYCHLKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP- 175 (281)
T ss_pred EEEecCCchHHHHHHhc---ccccccccchhHHHHHHHHHHHHhccCCcccCCCCHHHhccCCCCCeeccCCCceeecC-
Confidence 6666666521 11112222222222222222 678999999997653
Q ss_pred CCccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHH-HhHhhhcCChhHHH
Q 042825 522 NGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLAT-WFQKMHKNHDTFQM 600 (631)
Q Consensus 522 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~-~~~~~~~~~~~l~~ 600 (631)
.....+.+||.-|.+||+..+..++.++|+|++||+.||++.|.+||.....++.+ ..+.+ -.......+.+.+|
T Consensus 176 ---~~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~etY-krI~k~~~~~p~~is~~a~d 251 (281)
T KOG0580|consen 176 ---SNKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSHSETY-KRIRKVDLKFPSTISGGAAD 251 (281)
T ss_pred ---CCCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhhHHHH-HHHHHccccCCcccChhHHH
Confidence 22345689999999999999999999999999999999999999999876543322 22222 22223344678999
Q ss_pred HHHhhcCCChhhHHhHHHHHHH
Q 042825 601 AIDKTIQLDEENLANVSTVAEL 622 (631)
Q Consensus 601 ~id~~L~~d~~~r~~~~~vl~l 622 (631)
+|.+++..+|.+|..+.++++.
T Consensus 252 lI~~ll~~~p~~r~~l~~v~~h 273 (281)
T KOG0580|consen 252 LISRLLVKNPIERLALTEVMDH 273 (281)
T ss_pred HHHHHhccCccccccHHHHhhh
Confidence 9999999999999999988764
|
|
| >cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N | Back alignment and domain information |
|---|
Probab=99.85 E-value=4.3e-21 Score=200.70 Aligned_cols=193 Identities=19% Similarity=0.277 Sum_probs=135.3
Q ss_pred cccceeecCCCceEEEEEEec-CCcEEEEEEEecCCC-CHHHHHHHHHHHHHHhc-------------------------
Q 042825 420 FSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSV-TEQGIAQFESEITVLTK------------------------- 472 (631)
Q Consensus 420 f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~-~~~~~~~~~~Ei~~l~~------------------------- 472 (631)
|...+.||+|+||.||+|+.. +|+.||||+++.... .....+.+.+|++++..
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv 80 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFV 80 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEE
Confidence 567789999999999999865 589999999975432 12234566777665431
Q ss_pred ------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCC
Q 042825 473 ------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPEN 522 (631)
Q Consensus 473 ------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~ 522 (631)
|+|..++. ...+++.....++.+++.| +.+||+|||+++.....
T Consensus 81 ~E~~~~~~L~~~~~------~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~~ 154 (324)
T cd05589 81 MEYAAGGDLMMHIH------TDVFSEPRAVFYAACVVLGLQYLHENKIVYRDLKLDNLLLDTEGFVKIADFGLCKEGMGF 154 (324)
T ss_pred EcCCCCCcHHHHhh------cCCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCCcEEeCcccCCccCCCC
Confidence 33333321 2357888888888877765 56889999998754211
Q ss_pred CccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHH-HhHhhhcCChhHHHH
Q 042825 523 GKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLAT-WFQKMHKNHDTFQMA 601 (631)
Q Consensus 523 ~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~-~~~~~~~~~~~l~~~ 601 (631)
........|++.|+|||++.+..++.++|||||||++|||++|+.||.+...... ...+.. ........+.++.++
T Consensus 155 --~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~~~-~~~i~~~~~~~p~~~~~~~~~l 231 (324)
T cd05589 155 --GDRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEEV-FDSIVNDEVRYPRFLSREAISI 231 (324)
T ss_pred --CCcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHHHH-HHHHHhCCCCCCCCCCHHHHHH
Confidence 1223456799999999999988999999999999999999999999986432211 111111 111111235678999
Q ss_pred HHhhcCCChhhHH-----hHHHHHH
Q 042825 602 IDKTIQLDEENLA-----NVSTVAE 621 (631)
Q Consensus 602 id~~L~~d~~~r~-----~~~~vl~ 621 (631)
+.++|..||.+|+ .+.++++
T Consensus 232 i~~~L~~dP~~R~~~~~~~~~~l~~ 256 (324)
T cd05589 232 MRRLLRRNPERRLGSGEKDAEDVKK 256 (324)
T ss_pred HHHHhhcCHhHcCCCCCCCHHHHhh
Confidence 9999999999998 4555543
|
Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved |
| >cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors | Back alignment and domain information |
|---|
Probab=99.85 E-value=5.1e-21 Score=195.78 Aligned_cols=203 Identities=21% Similarity=0.311 Sum_probs=145.5
Q ss_pred CCcccceeecCCCceEEEEEEecC------CcEEEEEEEecCCCCHHHHHHHHHHHHHHhc-------------------
Q 042825 418 NNFSEENRLGRGGVGTVYKGELKD------GTEVGVKRMELGSVTEQGIAQFESEITVLTK------------------- 472 (631)
Q Consensus 418 ~~f~~~~~iG~G~fg~Vyk~~~~~------g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~------------------- 472 (631)
++|+..+.||+|+||.||+|.... ...||+|.+.... ......+|.+|++++.+
T Consensus 5 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~-~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~ 83 (283)
T cd05048 5 SAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENA-EPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQPT 83 (283)
T ss_pred HHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCC-CHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCce
Confidence 357778999999999999998643 2579999987543 33455678999988775
Q ss_pred ---------CChhHHhHhhhhc-----------CCCCCCHHHHHHHHHHhhcC------------------------CCc
Q 042825 473 ---------GTLGRHLFNWEEE-----------GLEPLEWNTRLNIALDVARG------------------------DDM 508 (631)
Q Consensus 473 ---------gsL~~~L~~~~~~-----------~~~~L~~~~~~~I~~~ia~g------------------------~~~ 508 (631)
|+|.+++...... ....+++.....++.+++.+ +.+
T Consensus 84 ~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nil~~~~~~~ 163 (283)
T cd05048 84 CMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHHFVHRDLAARNCLVGEGLTV 163 (283)
T ss_pred EEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccccceEEEcCCCcE
Confidence 5666666532111 11457888888888887765 357
Q ss_pred EEEeeccccccCCCCccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChHHHHHHHHH
Q 042825 509 RVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT-GRKVVDATHSDPEYIIHLATW 587 (631)
Q Consensus 509 kl~DFGla~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~Ellt-G~~P~~~~~~~~~~~~~l~~~ 587 (631)
+|+|||+++...............+++.|+|||++....++.++|||||||++|||++ |+.||.+....+ ....+..-
T Consensus 164 ~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~~-~~~~i~~~ 242 (283)
T cd05048 164 KISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQE-VIEMIRSR 242 (283)
T ss_pred EECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHHH-HHHHHHcC
Confidence 8999999987643222222334567889999999988899999999999999999998 999998654321 11111110
Q ss_pred hHh--hhcCChhHHHHHHhhcCCChhhHHhHHHHHHH
Q 042825 588 FQK--MHKNHDTFQMAIDKTIQLDEENLANVSTVAEL 622 (631)
Q Consensus 588 ~~~--~~~~~~~l~~~id~~L~~d~~~r~~~~~vl~l 622 (631)
... ....+.++.+++..|+..+|.+||++.++.+.
T Consensus 243 ~~~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~ 279 (283)
T cd05048 243 QLLPCPEDCPARVYALMIECWNEIPARRPRFKDIHTR 279 (283)
T ss_pred CcCCCcccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 000 11224689999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer |
| >PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=99.85 E-value=3.2e-21 Score=194.98 Aligned_cols=194 Identities=30% Similarity=0.464 Sum_probs=142.9
Q ss_pred cceeecCCCceEEEEEEec-----CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc------------------------
Q 042825 422 EENRLGRGGVGTVYKGELK-----DGTEVGVKRMELGSVTEQGIAQFESEITVLTK------------------------ 472 (631)
Q Consensus 422 ~~~~iG~G~fg~Vyk~~~~-----~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~------------------------ 472 (631)
..+.||.|+||.||+|.+. .+..|+||.+... ......++|.+|++.+.+
T Consensus 3 ~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~-~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~e 81 (259)
T PF07714_consen 3 LIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPS-SSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVME 81 (259)
T ss_dssp EEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTT-SSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEEE
T ss_pred EeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccc-cccccceeeeeccccccccccccccccccccccccccccccc
Confidence 4578999999999999977 2678999999653 344557889999998876
Q ss_pred ----CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCCc
Q 042825 473 ----GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENGK 524 (631)
Q Consensus 473 ----gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~~ 524 (631)
|+|.++|.. .....+++..+..|+.++|+| +.+||+|||+++.......
T Consensus 82 ~~~~g~L~~~L~~---~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~~ 158 (259)
T PF07714_consen 82 YCPGGSLDDYLKS---KNKEPLSEQQRLSIAIQIAEALSYLHSNNIIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKSK 158 (259)
T ss_dssp --TTEBHHHHHHH---TCTTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEETTTEEEEESTTTGEETTTSSS
T ss_pred ccccccccccccc---cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 677777754 224678999999999999988 4578999999987632222
Q ss_pred cccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChHHHHHHHHHhHhh---hcCChhHHH
Q 042825 525 HSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT-GRKVVDATHSDPEYIIHLATWFQKM---HKNHDTFQM 600 (631)
Q Consensus 525 ~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~Ellt-G~~P~~~~~~~~~~~~~l~~~~~~~---~~~~~~l~~ 600 (631)
........+...|+|||.+....++.++||||||+++|||++ |+.||..... ......+ ...... ...+..+.+
T Consensus 159 ~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~ 236 (259)
T PF07714_consen 159 YKNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDN-EEIIEKL-KQGQRLPIPDNCPKDIYS 236 (259)
T ss_dssp EEESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCH-HHHHHHH-HTTEETTSBTTSBHHHHH
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccc-ccccccc-cccccceeccchhHHHHH
Confidence 222334557789999999998889999999999999999999 7899875522 1111222 111111 112467999
Q ss_pred HHHhhcCCChhhHHhHHHHHH
Q 042825 601 AIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 601 ~id~~L~~d~~~r~~~~~vl~ 621 (631)
++..|+..+|++||++.++++
T Consensus 237 li~~C~~~~p~~RPs~~~i~~ 257 (259)
T PF07714_consen 237 LIQQCWSHDPEKRPSFQEILQ 257 (259)
T ss_dssp HHHHHT-SSGGGS--HHHHHH
T ss_pred HHHHHcCCChhhCcCHHHHHh
Confidence 999999999999999999876
|
Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A .... |
| >cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2 | Back alignment and domain information |
|---|
Probab=99.85 E-value=9.8e-21 Score=198.65 Aligned_cols=198 Identities=21% Similarity=0.327 Sum_probs=142.4
Q ss_pred cCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc-----------------------
Q 042825 417 TNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK----------------------- 472 (631)
Q Consensus 417 t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~----------------------- 472 (631)
-++|+..+.||+|+||.||+++.. +|..||+|.+.... .....+++.+|++++.+
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 82 (331)
T cd06649 4 DDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEI-KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICM 82 (331)
T ss_pred cccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeeccc-CHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEe
Confidence 367899999999999999999976 58899999987542 33456779999998876
Q ss_pred -----CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC-------------------------CCcEEEeeccccccCCC
Q 042825 473 -----GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG-------------------------DDMRVADFGLVRLVPEN 522 (631)
Q Consensus 473 -----gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g-------------------------~~~kl~DFGla~~~~~~ 522 (631)
|+|.+++.. ...+.+.....++.+++.| +.+||+|||+++.....
T Consensus 83 e~~~~~~L~~~l~~-----~~~~~~~~~~~~~~~i~~~l~~lH~~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 157 (331)
T cd06649 83 EHMDGGSLDQVLKE-----AKRIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS 157 (331)
T ss_pred ecCCCCcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHhhcCCEEcCCCChhhEEEcCCCcEEEccCccccccccc
Confidence 566665532 1245666666666555443 45789999999866321
Q ss_pred CccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHH----------------------
Q 042825 523 GKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEY---------------------- 580 (631)
Q Consensus 523 ~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~---------------------- 580 (631)
......||..|+|||++.+..++.++|||||||++|||+||+.||......+..
T Consensus 158 ----~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (331)
T cd06649 158 ----MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAKELEAIFGRPVVDGEEGEPHSISPRP 233 (331)
T ss_pred ----ccccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccccCCccccCccc
Confidence 223457999999999999889999999999999999999999999643221100
Q ss_pred -------------------HHHHHHHhHhh-------hcCChhHHHHHHhhcCCChhhHHhHHHHHHHHH
Q 042825 581 -------------------IIHLATWFQKM-------HKNHDTFQMAIDKTIQLDEENLANVSTVAELGD 624 (631)
Q Consensus 581 -------------------~~~l~~~~~~~-------~~~~~~l~~~id~~L~~d~~~r~~~~~vl~lal 624 (631)
...+..+.... ...++++.+++.+||+.||++|+++.++++--.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h~~ 303 (331)
T cd06649 234 RPPGRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLMNHTF 303 (331)
T ss_pred ccccccccccccccccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcccCCCHHHHhcChH
Confidence 00011111000 012357899999999999999999999876443
|
Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst |
| >PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=2.4e-21 Score=203.89 Aligned_cols=194 Identities=18% Similarity=0.233 Sum_probs=139.5
Q ss_pred cCCcccceeecCCCceEEEEEEecC--CcEEEEEEEecCCC-CHHHHHHHHHHHHHHhc---------------------
Q 042825 417 TNNFSEENRLGRGGVGTVYKGELKD--GTEVGVKRMELGSV-TEQGIAQFESEITVLTK--------------------- 472 (631)
Q Consensus 417 t~~f~~~~~iG~G~fg~Vyk~~~~~--g~~vAvK~l~~~~~-~~~~~~~~~~Ei~~l~~--------------------- 472 (631)
.++|...+.||+|+||.||+|..+. +..||+|++..... .....+.+.+|++++..
T Consensus 29 ~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~l 108 (340)
T PTZ00426 29 YEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYLYL 108 (340)
T ss_pred hhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEEEE
Confidence 3468889999999999999998653 36899999865322 22345678889888865
Q ss_pred -------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCC
Q 042825 473 -------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPE 521 (631)
Q Consensus 473 -------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~ 521 (631)
|+|.+++.. ...+++.....++.+++.+ +.+||+|||+++....
T Consensus 109 v~Ey~~~g~L~~~i~~-----~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~~ 183 (340)
T PTZ00426 109 VLEFVIGGEFFTFLRR-----NKRFPNDVGCFYAAQIVLIFEYLQSLNIVYRDLKPENLLLDKDGFIKMTDFGFAKVVDT 183 (340)
T ss_pred EEeCCCCCcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCCCEEEecCCCCeecCC
Confidence 556555532 2346676666677666654 5689999999987632
Q ss_pred CCccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHH-HhHhhhcCChhHHH
Q 042825 522 NGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLAT-WFQKMHKNHDTFQM 600 (631)
Q Consensus 522 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~-~~~~~~~~~~~l~~ 600 (631)
. .....||+.|+|||++.+..++.++|||||||++|||++|+.||....... ....+.. ........++++.+
T Consensus 184 ~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~-~~~~i~~~~~~~p~~~~~~~~~ 257 (340)
T PTZ00426 184 R-----TYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPLL-IYQKILEGIIYFPKFLDNNCKH 257 (340)
T ss_pred C-----cceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCHHH-HHHHHhcCCCCCCCCCCHHHHH
Confidence 1 234679999999999988889999999999999999999999998643221 1111111 11111123467899
Q ss_pred HHHhhcCCChhhHH-----hHHHHHH
Q 042825 601 AIDKTIQLDEENLA-----NVSTVAE 621 (631)
Q Consensus 601 ~id~~L~~d~~~r~-----~~~~vl~ 621 (631)
++.+++..+|++|. ++.++++
T Consensus 258 li~~~l~~dp~~R~~~~~~~~~~~~~ 283 (340)
T PTZ00426 258 LMKKLLSHDLTKRYGNLKKGAQNVKE 283 (340)
T ss_pred HHHHHcccCHHHcCCCCCCCHHHHHc
Confidence 99999999999994 6776654
|
|
| >KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.85 E-value=2.7e-21 Score=189.31 Aligned_cols=204 Identities=23% Similarity=0.298 Sum_probs=141.2
Q ss_pred cCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc--------------C-ChhHH--
Q 042825 417 TNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK--------------G-TLGRH-- 478 (631)
Q Consensus 417 t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~--------------g-sL~~~-- 478 (631)
.++|+..+.|++|+||.||+|+.+ +++.||+|+++.+.-...---.-.+||.++.+ | ++.+.
T Consensus 75 v~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy~ 154 (419)
T KOG0663|consen 75 VEEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKIYI 154 (419)
T ss_pred HHHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccceeee
Confidence 456788899999999999999965 68999999998754222111235789999876 1 11110
Q ss_pred --------hHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCCccc
Q 042825 479 --------LFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENGKHS 526 (631)
Q Consensus 479 --------L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~~~~ 526 (631)
|......-.+.+...+..-+.+|+.+| +.+||+|||+||..... ..
T Consensus 155 VMe~~EhDLksl~d~m~q~F~~~evK~L~~QlL~glk~lH~~wilHRDLK~SNLLm~~~G~lKiaDFGLAR~ygsp--~k 232 (419)
T KOG0663|consen 155 VMEYVEHDLKSLMETMKQPFLPGEVKTLMLQLLRGLKHLHDNWILHRDLKTSNLLLSHKGILKIADFGLAREYGSP--LK 232 (419)
T ss_pred eHHHHHhhHHHHHHhccCCCchHHHHHHHHHHHHHHHHHhhceeEecccchhheeeccCCcEEecccchhhhhcCC--cc
Confidence 011111222455556666666676666 66899999999987532 33
Q ss_pred cccccccCcccccccccccCC-CCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHH--------HHh---------
Q 042825 527 ILTKVAGTFGYLAPEYIVTGR-ITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLA--------TWF--------- 588 (631)
Q Consensus 527 ~~~~~~gt~~Y~aPE~~~~~~-~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~--------~~~--------- 588 (631)
..+..+-|.+|.|||.+.+.+ |++.+|+||+||++.||+++++-|.+..+-+....... .|.
T Consensus 233 ~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llGtPte~iwpg~~~lp~~k 312 (419)
T KOG0663|consen 233 PYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLGTPSEAIWPGYSELPAVK 312 (419)
T ss_pred cCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhCCCccccCCCccccchhh
Confidence 467788999999999998765 99999999999999999999999987644321111110 121
Q ss_pred ------------Hhhhc---CChhHHHHHHhhcCCChhhHHhHHHHHHH
Q 042825 589 ------------QKMHK---NHDTFQMAIDKTIQLDEENLANVSTVAEL 622 (631)
Q Consensus 589 ------------~~~~~---~~~~l~~~id~~L~~d~~~r~~~~~vl~l 622 (631)
+..+. .++.-.+++...|..||..|.++.+.++-
T Consensus 313 ~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~h 361 (419)
T KOG0663|consen 313 KMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLKH 361 (419)
T ss_pred ccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhcc
Confidence 00000 12556789999999999999999987653
|
|
| >cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon | Back alignment and domain information |
|---|
Probab=99.85 E-value=2.8e-21 Score=201.92 Aligned_cols=190 Identities=18% Similarity=0.246 Sum_probs=133.0
Q ss_pred eeecCCCceEEEEEEec-CCcEEEEEEEecCCC-CHHHHHHHHHHHHHHhc-----------------------------
Q 042825 424 NRLGRGGVGTVYKGELK-DGTEVGVKRMELGSV-TEQGIAQFESEITVLTK----------------------------- 472 (631)
Q Consensus 424 ~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~-~~~~~~~~~~Ei~~l~~----------------------------- 472 (631)
++||+|+||.||+|+.. +++.||||++..... .....+.+..|.+++..
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~ 80 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNG 80 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCC
Confidence 46999999999999976 488999999975422 22344567777777653
Q ss_pred CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCCccccc
Q 042825 473 GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENGKHSIL 528 (631)
Q Consensus 473 gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~~~~~~ 528 (631)
|+|..++.. ...+.+.....++.+++.| +.+||+|||+++...... ...
T Consensus 81 ~~L~~~l~~-----~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~--~~~ 153 (321)
T cd05591 81 GDLMFQIQR-----SRKFDEPRSRFYAAEVTLALMFLHRHGVIYRDLKLDNILLDAEGHCKLADFGMCKEGILNG--VTT 153 (321)
T ss_pred CcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEeecccceecccCC--ccc
Confidence 344444321 2346777777777777665 467899999997642111 223
Q ss_pred cccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHH-HhHhhhcCChhHHHHHHhhcC
Q 042825 529 TKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLAT-WFQKMHKNHDTFQMAIDKTIQ 607 (631)
Q Consensus 529 ~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~-~~~~~~~~~~~l~~~id~~L~ 607 (631)
....||+.|+|||++.+..++.++|||||||++|||++|+.||....... ....+.. -.......+.++.+++.++|.
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~-~~~~i~~~~~~~p~~~~~~~~~ll~~~L~ 232 (321)
T cd05591 154 TTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNEDD-LFESILHDDVLYPVWLSKEAVSILKAFMT 232 (321)
T ss_pred cccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCHHH-HHHHHHcCCCCCCCCCCHHHHHHHHHHhc
Confidence 45679999999999998899999999999999999999999998654321 1111111 001111124688999999999
Q ss_pred CChhhHH-------hHHHHHH
Q 042825 608 LDEENLA-------NVSTVAE 621 (631)
Q Consensus 608 ~d~~~r~-------~~~~vl~ 621 (631)
.||.+|+ ++.++++
T Consensus 233 ~dp~~R~~~~~~~~~~~~~~~ 253 (321)
T cd05591 233 KNPNKRLGCVASQGGEDAIKQ 253 (321)
T ss_pred cCHHHcCCCCCCCCCHHHHhc
Confidence 9999998 5665543
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to |
| >cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.1e-20 Score=201.43 Aligned_cols=201 Identities=18% Similarity=0.233 Sum_probs=139.4
Q ss_pred CcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhcCC---h---hH-----------H--
Q 042825 419 NFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTKGT---L---GR-----------H-- 478 (631)
Q Consensus 419 ~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~gs---L---~~-----------~-- 478 (631)
+|+..+.||+|+||.||+++.. +|+.||||++..........+++.+|++++..-. + .+ +
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 80 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIY 80 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEE
Confidence 4778899999999999999964 6899999998654333345567889998886511 0 00 0
Q ss_pred ---------hHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCCcc
Q 042825 479 ---------LFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENGKH 525 (631)
Q Consensus 479 ---------L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~~~ 525 (631)
+..+. .....+++.....++.+++.| +.+||+|||+++...... .
T Consensus 81 lv~e~~~~~l~~~~-~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~~~~~-~ 158 (372)
T cd07853 81 VVTELMQSDLHKII-VSPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEEPDE-S 158 (372)
T ss_pred EEeeccccCHHHHH-hcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHHEEECCCCCEEeccccceeecccCc-c
Confidence 00101 112357777777788777765 467899999998753221 2
Q ss_pred ccccccccCcccccccccccC-CCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHH---------------HhH
Q 042825 526 SILTKVAGTFGYLAPEYIVTG-RITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLAT---------------WFQ 589 (631)
Q Consensus 526 ~~~~~~~gt~~Y~aPE~~~~~-~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~---------------~~~ 589 (631)
.......++..|+|||++.+. .++.++||||+||++|||++|+.||.+...... ...+.. ...
T Consensus 159 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~-~~~i~~~~g~~~~~~~~~~~~~~~ 237 (372)
T cd07853 159 KHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQ-LDLITDLLGTPSLEAMRSACEGAR 237 (372)
T ss_pred ccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHH-HHHHHHHcCCCCHHHHHHhhHHHH
Confidence 223445689999999998774 489999999999999999999999976532211 111100 000
Q ss_pred ------------------hhhcCChhHHHHHHhhcCCChhhHHhHHHHHHH
Q 042825 590 ------------------KMHKNHDTFQMAIDKTIQLDEENLANVSTVAEL 622 (631)
Q Consensus 590 ------------------~~~~~~~~l~~~id~~L~~d~~~r~~~~~vl~l 622 (631)
.....++++.+++.++|..||.+|+++.++++-
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 288 (372)
T cd07853 238 AHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAH 288 (372)
T ss_pred HHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcC
Confidence 001124578899999999999999999998764
|
Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription |
| >KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.85 E-value=6e-22 Score=205.15 Aligned_cols=201 Identities=18% Similarity=0.301 Sum_probs=141.4
Q ss_pred CCcccceeecCCCceEEEEEEecCCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc-------------------------
Q 042825 418 NNFSEENRLGRGGVGTVYKGELKDGTEVGVKRMELGSVTEQGIAQFESEITVLTK------------------------- 472 (631)
Q Consensus 418 ~~f~~~~~iG~G~fg~Vyk~~~~~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~------------------------- 472 (631)
..|++.+.||+||.+.|||+...+.+.+|+|++.....+.+....|..||+.|.+
T Consensus 361 ~~Yeilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYmvmE 440 (677)
T KOG0596|consen 361 REYEILKQIGSGGSSKVFKVLNSDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYMVME 440 (677)
T ss_pred chhhHHHhhcCCCcceeeeeecCCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEEEee
Confidence 4688899999999999999998888999999988776677778889999999987
Q ss_pred ---CChhHHhHhhhhcCCCCCCH------HHHHHHHHHh-----hcC-----------CCcEEEeeccccccCCCCcccc
Q 042825 473 ---GTLGRHLFNWEEEGLEPLEW------NTRLNIALDV-----ARG-----------DDMRVADFGLVRLVPENGKHSI 527 (631)
Q Consensus 473 ---gsL~~~L~~~~~~~~~~L~~------~~~~~I~~~i-----a~g-----------~~~kl~DFGla~~~~~~~~~~~ 527 (631)
-+|..+|.. ......+| .+.+.++.-| .+. +.+||+|||+|..+..+.+...
T Consensus 441 ~Gd~DL~kiL~k---~~~~~~~~~lk~ywkqML~aV~~IH~~gIVHSDLKPANFLlVkG~LKLIDFGIA~aI~~DTTsI~ 517 (677)
T KOG0596|consen 441 CGDIDLNKILKK---KKSIDPDWFLKFYWKQMLLAVKTIHQHGIVHSDLKPANFLLVKGRLKLIDFGIANAIQPDTTSIV 517 (677)
T ss_pred cccccHHHHHHh---ccCCCchHHHHHHHHHHHHHHHHHHHhceeecCCCcccEEEEeeeEEeeeechhcccCcccccee
Confidence 234444432 11222333 2222222111 111 5678999999999986666656
Q ss_pred ccccccCcccccccccccC-----------CCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHH-h---Hhhh
Q 042825 528 LTKVAGTFGYLAPEYIVTG-----------RITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATW-F---QKMH 592 (631)
Q Consensus 528 ~~~~~gt~~Y~aPE~~~~~-----------~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~-~---~~~~ 592 (631)
....+||+.||+||.+... +.+.++||||+||+||+|+.|+.||............+.+- . ....
T Consensus 518 kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~n~~aKl~aI~~P~~~Iefp~~ 597 (677)
T KOG0596|consen 518 KDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQIINQIAKLHAITDPNHEIEFPDI 597 (677)
T ss_pred eccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHHHHHHHHHhhcCCCccccccCC
Confidence 6778999999999988532 26679999999999999999999997432111111111110 0 0111
Q ss_pred cCChhHHHHHHhhcCCChhhHHhHHHHHH
Q 042825 593 KNHDTFQMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 593 ~~~~~l~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
....++.++...||..||.+|+++.++++
T Consensus 598 ~~~~~li~~mK~CL~rdPkkR~si~eLLq 626 (677)
T KOG0596|consen 598 PENDELIDVMKCCLARDPKKRWSIPELLQ 626 (677)
T ss_pred CCchHHHHHHHHHHhcCcccCCCcHHHhc
Confidence 22345899999999999999999998875
|
|
| >cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta | Back alignment and domain information |
|---|
Probab=99.85 E-value=3.2e-21 Score=201.30 Aligned_cols=185 Identities=19% Similarity=0.249 Sum_probs=130.4
Q ss_pred eeecCCCceEEEEEEec-CCcEEEEEEEecCCC-CHHHHHHHHHHHHHHhc-----------------------------
Q 042825 424 NRLGRGGVGTVYKGELK-DGTEVGVKRMELGSV-TEQGIAQFESEITVLTK----------------------------- 472 (631)
Q Consensus 424 ~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~-~~~~~~~~~~Ei~~l~~----------------------------- 472 (631)
+.||+|+||+||+|+.+ +++.||||++..... .....+.+..|+.++..
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~ 80 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNG 80 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCC
Confidence 46999999999999976 588999999975321 12344566777776653
Q ss_pred CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCCccccc
Q 042825 473 GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENGKHSIL 528 (631)
Q Consensus 473 gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~~~~~~ 528 (631)
|+|..++.. ...++......++.+++.| +.+||+|||+++...... ...
T Consensus 81 g~L~~~i~~-----~~~l~~~~~~~~~~ql~~~L~~lH~~~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~--~~~ 153 (320)
T cd05590 81 GDLMFHIQK-----SRRFDEARARFYAAEITSALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNG--KTT 153 (320)
T ss_pred chHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCCcEEEeeCCCCeecCcCC--Ccc
Confidence 444444421 2346777777777777665 467899999987642111 223
Q ss_pred cccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHH-HhHhhhcCChhHHHHHHhhcC
Q 042825 529 TKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLAT-WFQKMHKNHDTFQMAIDKTIQ 607 (631)
Q Consensus 529 ~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~-~~~~~~~~~~~l~~~id~~L~ 607 (631)
....||+.|+|||++.+..++.++|||||||++|||++|+.||........ ...+.. ........+.++.+++.++|.
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~li~~~L~ 232 (320)
T cd05590 154 STFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENEDDL-FEAILNDEVVYPTWLSQDAVDILKAFMT 232 (320)
T ss_pred cccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHH-HHHHhcCCCCCCCCCCHHHHHHHHHHcc
Confidence 456799999999999988899999999999999999999999986533211 111111 011111234678999999999
Q ss_pred CChhhHHhH
Q 042825 608 LDEENLANV 616 (631)
Q Consensus 608 ~d~~~r~~~ 616 (631)
.||.+|+++
T Consensus 233 ~dP~~R~~~ 241 (320)
T cd05590 233 KNPTMRLGS 241 (320)
T ss_pred cCHHHCCCC
Confidence 999999987
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal |
| >cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases | Back alignment and domain information |
|---|
Probab=99.85 E-value=5.5e-21 Score=195.19 Aligned_cols=203 Identities=22% Similarity=0.339 Sum_probs=144.5
Q ss_pred CCcccceeecCCCceEEEEEEecC------CcEEEEEEEecCCCCHHHHHHHHHHHHHHhc-------------------
Q 042825 418 NNFSEENRLGRGGVGTVYKGELKD------GTEVGVKRMELGSVTEQGIAQFESEITVLTK------------------- 472 (631)
Q Consensus 418 ~~f~~~~~iG~G~fg~Vyk~~~~~------g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~------------------- 472 (631)
++|...+.||+|+||.||+|+..+ +..||||.+.... .....++|.+|++++.+
T Consensus 5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~ 83 (280)
T cd05049 5 DTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETA-SNDARKDFEREAELLTNFQHENIVKFYGVCTEGDPP 83 (280)
T ss_pred HHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccC-CHHHHHHHHHHHHHHHhcCCCCchheeeEEecCCCe
Confidence 457788999999999999998643 4789999987543 23356789999988875
Q ss_pred ---------CChhHHhHhhh---------hcCCCCCCHHHHHHHHHHhhcC------------------------CCcEE
Q 042825 473 ---------GTLGRHLFNWE---------EEGLEPLEWNTRLNIALDVARG------------------------DDMRV 510 (631)
Q Consensus 473 ---------gsL~~~L~~~~---------~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl 510 (631)
++|.+++.... ......+.+.....++.+++.+ +.+||
T Consensus 84 ~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~h~dlkp~nili~~~~~~kl 163 (280)
T cd05049 84 IMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQHFVHRDLATRNCLVGYDLVVKI 163 (280)
T ss_pred EEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeeccccccceEEEcCCCeEEE
Confidence 56666664321 1112457787777777777654 45789
Q ss_pred EeeccccccCCCCccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChHHHHHHHH-Hh
Q 042825 511 ADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT-GRKVVDATHSDPEYIIHLAT-WF 588 (631)
Q Consensus 511 ~DFGla~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~Ellt-G~~P~~~~~~~~~~~~~l~~-~~ 588 (631)
+|||+++...............+++.|+|||++.+..++.++|||||||++|||++ |+.||....... ....+.. ..
T Consensus 164 ~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~~-~~~~~~~~~~ 242 (280)
T cd05049 164 GDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNEE-VIECITQGRL 242 (280)
T ss_pred CCcccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHHH-HHHHHHcCCc
Confidence 99999986542222222233456789999999999999999999999999999999 999997543221 1111111 00
Q ss_pred Hh-hhcCChhHHHHHHhhcCCChhhHHhHHHHHHH
Q 042825 589 QK-MHKNHDTFQMAIDKTIQLDEENLANVSTVAEL 622 (631)
Q Consensus 589 ~~-~~~~~~~l~~~id~~L~~d~~~r~~~~~vl~l 622 (631)
.. ....+..+.+++.+|+..+|.+|+++.++++.
T Consensus 243 ~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~ 277 (280)
T cd05049 243 LQRPRTCPSEVYDIMLGCWKRDPQQRINIKDIHER 277 (280)
T ss_pred CCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHH
Confidence 00 11224688999999999999999999998875
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt |
| >KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.85 E-value=5.6e-22 Score=192.91 Aligned_cols=195 Identities=20% Similarity=0.272 Sum_probs=143.3
Q ss_pred cCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCC-CHHHHHHHHHHHHHHhc----------------------
Q 042825 417 TNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSV-TEQGIAQFESEITVLTK---------------------- 472 (631)
Q Consensus 417 t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~-~~~~~~~~~~Ei~~l~~---------------------- 472 (631)
.++|+-.++||+|.||.|-.++-+ .|+.+|+|+++++-+ ...+...-..|-+++.+
T Consensus 167 m~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drlCFV 246 (516)
T KOG0690|consen 167 MEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRLCFV 246 (516)
T ss_pred cchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceEEEE
Confidence 468899999999999999999866 599999999987643 23334445566666654
Q ss_pred ------CChhHHhHh-----------hhhcCCCCCCHHHHHHHHHHhh--------cCCCcEEEeeccccccCCCCcccc
Q 042825 473 ------GTLGRHLFN-----------WEEEGLEPLEWNTRLNIALDVA--------RGDDMRVADFGLVRLVPENGKHSI 527 (631)
Q Consensus 473 ------gsL~~~L~~-----------~~~~~~~~L~~~~~~~I~~~ia--------~g~~~kl~DFGla~~~~~~~~~~~ 527 (631)
|.|.-||.. |..+....|.+.|..+|+.... +.+++||+|||+++.-- .....
T Consensus 247 MeyanGGeLf~HLsrer~FsE~RtRFYGaEIvsAL~YLHs~~ivYRDlKLENLlLDkDGHIKitDFGLCKE~I--~~g~t 324 (516)
T KOG0690|consen 247 MEYANGGELFFHLSRERVFSEDRTRFYGAEIVSALGYLHSRNIVYRDLKLENLLLDKDGHIKITDFGLCKEEI--KYGDT 324 (516)
T ss_pred EEEccCceEeeehhhhhcccchhhhhhhHHHHHHhhhhhhCCeeeeechhhhheeccCCceEeeecccchhcc--cccce
Confidence 555555532 1111123344444444432211 33789999999998542 12234
Q ss_pred ccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHhHhhhcCChhHHHHHHhhcC
Q 042825 528 LTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQKMHKNHDTFQMAIDKTIQ 607 (631)
Q Consensus 528 ~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~id~~L~ 607 (631)
+.++|||+.|+|||++....|..++|.|.+|||||||++|+.||.....+......+...++.....+++.+.++...|.
T Consensus 325 ~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~kLFeLIl~ed~kFPr~ls~eAktLLsGLL~ 404 (516)
T KOG0690|consen 325 TKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHEKLFELILMEDLKFPRTLSPEAKTLLSGLLK 404 (516)
T ss_pred eccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccchhHHHHHHHhhhccCCccCCHHHHHHHHHHhh
Confidence 56799999999999999999999999999999999999999999876655555566666666666667889999999999
Q ss_pred CChhhH
Q 042825 608 LDEENL 613 (631)
Q Consensus 608 ~d~~~r 613 (631)
.||.+|
T Consensus 405 kdP~kR 410 (516)
T KOG0690|consen 405 KDPKKR 410 (516)
T ss_pred cChHhh
Confidence 999988
|
|
| >cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.85 E-value=2.7e-21 Score=204.37 Aligned_cols=197 Identities=19% Similarity=0.288 Sum_probs=143.5
Q ss_pred CCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCH-HHHHHHHHHHHHHhc-----------------------
Q 042825 418 NNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTE-QGIAQFESEITVLTK----------------------- 472 (631)
Q Consensus 418 ~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~-~~~~~~~~Ei~~l~~----------------------- 472 (631)
++|...+.||+|+||+||+|+.. +|+.||||++....... .....+.+|++++..
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVM 80 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEE
Confidence 46888999999999999999976 68999999997543221 345667888887765
Q ss_pred -----CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCC
Q 042825 473 -----GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENG 523 (631)
Q Consensus 473 -----gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~ 523 (631)
|+|.+++.. ...+++.....++.+++.| +.+||+|||+++......
T Consensus 81 e~~~~~~L~~~l~~-----~~~l~~~~~~~i~~qi~~aL~~LH~~giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~ 155 (350)
T cd05573 81 EYMPGGDLMNLLIR-----KDVFPEETARFYIAELVLALDSVHKLGFIHRDIKPDNILIDADGHIKLADFGLCKKMNKAK 155 (350)
T ss_pred cCCCCCCHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEeecCCCCccCcccC
Confidence 445444432 1456777777777777765 467899999998764222
Q ss_pred ---------------------------ccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCC
Q 042825 524 ---------------------------KHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHS 576 (631)
Q Consensus 524 ---------------------------~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~ 576 (631)
.........||+.|+|||++.+..++.++|||||||++|||++|+.||.....
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~ 235 (350)
T cd05573 156 DREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDTL 235 (350)
T ss_pred cccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCCCH
Confidence 00122345799999999999999999999999999999999999999986543
Q ss_pred ChHHHHHHHHHhHhh---h--cCChhHHHHHHhhcCCChhhHHh-HHHHHH
Q 042825 577 DPEYIIHLATWFQKM---H--KNHDTFQMAIDKTIQLDEENLAN-VSTVAE 621 (631)
Q Consensus 577 ~~~~~~~l~~~~~~~---~--~~~~~l~~~id~~L~~d~~~r~~-~~~vl~ 621 (631)
.. ....+..|.... . ..++++.++|..++. +|.+|++ +.++++
T Consensus 236 ~~-~~~~i~~~~~~~~~p~~~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~ 284 (350)
T cd05573 236 QE-TYNKIINWKESLRFPPDPPVSPEAIDLICRLLC-DPEDRLGSFEEIKS 284 (350)
T ss_pred HH-HHHHHhccCCcccCCCCCCCCHHHHHHHHHHcc-ChhhcCCCHHHHhc
Confidence 21 222333332211 1 125688999999996 9999999 988875
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the |
| >cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn | Back alignment and domain information |
|---|
Probab=99.85 E-value=7.1e-21 Score=192.34 Aligned_cols=197 Identities=22% Similarity=0.363 Sum_probs=143.8
Q ss_pred CCcccceeecCCCceEEEEEEecCCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc-------------------------
Q 042825 418 NNFSEENRLGRGGVGTVYKGELKDGTEVGVKRMELGSVTEQGIAQFESEITVLTK------------------------- 472 (631)
Q Consensus 418 ~~f~~~~~iG~G~fg~Vyk~~~~~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~------------------------- 472 (631)
++|+..+.||+|+||.||+|...+++.||+|++.... ...+.+.+|+.++.+
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 82 (261)
T cd05072 6 ESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGT---MSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEY 82 (261)
T ss_pred HHeEEeeecCCcCCceEEEEEecCCceEEEEEccCCc---hhHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEec
Confidence 4688889999999999999998888899999986533 235678889888875
Q ss_pred ---CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCCcc
Q 042825 473 ---GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENGKH 525 (631)
Q Consensus 473 ---gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~~~ 525 (631)
|+|.+++.. .....+.+..+..++.+++.+ +.++|+|||+++...... .
T Consensus 83 ~~~~~L~~~l~~---~~~~~~~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~-~ 158 (261)
T cd05072 83 MAKGSLLDFLKS---DEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNE-Y 158 (261)
T ss_pred CCCCcHHHHHHH---hcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEecCCCcEEECCCccceecCCCc-e
Confidence 566665542 223457788888888777765 346899999998764221 1
Q ss_pred ccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChHHHHHHHH-HhH-hhhcCChhHHHHH
Q 042825 526 SILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT-GRKVVDATHSDPEYIIHLAT-WFQ-KMHKNHDTFQMAI 602 (631)
Q Consensus 526 ~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~Ellt-G~~P~~~~~~~~~~~~~l~~-~~~-~~~~~~~~l~~~i 602 (631)
.......++..|+|||+.....++.++|||||||++|||+| |+.||....... ....+.. +.. .....+.++.+++
T Consensus 159 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~li 237 (261)
T cd05072 159 TAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSD-VMSALQRGYRMPRMENCPDELYDIM 237 (261)
T ss_pred eccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHHH-HHHHHHcCCCCCCCCCCCHHHHHHH
Confidence 12233456778999999988889999999999999999999 999997543221 1111111 110 0112246889999
Q ss_pred HhhcCCChhhHHhHHHHHHH
Q 042825 603 DKTIQLDEENLANVSTVAEL 622 (631)
Q Consensus 603 d~~L~~d~~~r~~~~~vl~l 622 (631)
.+|+..+|++||++.++.++
T Consensus 238 ~~~l~~~p~~Rp~~~~i~~~ 257 (261)
T cd05072 238 KTCWKEKAEERPTFDYLQSV 257 (261)
T ss_pred HHHccCCcccCcCHHHHHHH
Confidence 99999999999999998875
|
Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa |
| >cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.1e-20 Score=197.03 Aligned_cols=200 Identities=22% Similarity=0.299 Sum_probs=143.3
Q ss_pred CCcccceeecCCCceEEEEEEec-CCc----EEEEEEEecCCCCHHHHHHHHHHHHHHhc--------------------
Q 042825 418 NNFSEENRLGRGGVGTVYKGELK-DGT----EVGVKRMELGSVTEQGIAQFESEITVLTK-------------------- 472 (631)
Q Consensus 418 ~~f~~~~~iG~G~fg~Vyk~~~~-~g~----~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~-------------------- 472 (631)
.+|+..+.||+|+||.||+|++. ++. .||||++.... .....++|..|+.++..
T Consensus 7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~ 85 (316)
T cd05108 7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT-SPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQL 85 (316)
T ss_pred hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccC-CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCCCcee
Confidence 36888999999999999999864 333 48999986432 33455778889888765
Q ss_pred -------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCC
Q 042825 473 -------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPE 521 (631)
Q Consensus 473 -------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~ 521 (631)
|++.+++.. ....+.+...+.++.++++| ..+||+|||+++....
T Consensus 86 v~e~~~~g~l~~~l~~----~~~~~~~~~~~~~~~qi~~~L~~LH~~~iiH~dlkp~Nill~~~~~~kl~DfG~a~~~~~ 161 (316)
T cd05108 86 ITQLMPFGCLLDYVRE----HKDNIGSQYLLNWCVQIAKGMNYLEERRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 161 (316)
T ss_pred eeecCCCCCHHHHHHh----ccccCCHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEecCCCcEEEccccccccccC
Confidence 555555532 23457888888888888876 4578999999997743
Q ss_pred CCccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChHHHHHHHHHhHh---hhcCChh
Q 042825 522 NGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT-GRKVVDATHSDPEYIIHLATWFQK---MHKNHDT 597 (631)
Q Consensus 522 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~Ellt-G~~P~~~~~~~~~~~~~l~~~~~~---~~~~~~~ 597 (631)
...........++..|+|||++.+..++.++|||||||++|||++ |+.||++.... ....+...... ......+
T Consensus 162 ~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 239 (316)
T cd05108 162 DEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS--EISSILEKGERLPQPPICTID 239 (316)
T ss_pred CCcceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHH--HHHHHHhCCCCCCCCCCCCHH
Confidence 322222223345778999999998899999999999999999998 99999764321 11111111100 1112357
Q ss_pred HHHHHHhhcCCChhhHHhHHHHHHHHH
Q 042825 598 FQMAIDKTIQLDEENLANVSTVAELGD 624 (631)
Q Consensus 598 l~~~id~~L~~d~~~r~~~~~vl~lal 624 (631)
+.+++..|+..+|.+||++.+++....
T Consensus 240 ~~~li~~cl~~~p~~Rps~~~l~~~l~ 266 (316)
T cd05108 240 VYMIMVKCWMIDADSRPKFRELIIEFS 266 (316)
T ss_pred HHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 899999999999999999999887543
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor |
| >cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.85 E-value=2e-20 Score=191.92 Aligned_cols=197 Identities=22% Similarity=0.367 Sum_probs=143.0
Q ss_pred CcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCH-HHHHHHHHHHHHHhc------------------------
Q 042825 419 NFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTE-QGIAQFESEITVLTK------------------------ 472 (631)
Q Consensus 419 ~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~-~~~~~~~~Ei~~l~~------------------------ 472 (631)
+|+..++||+|+||+||++... +++.||||++....... .....+.+|++++.+
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEe
Confidence 4778899999999999999965 68999999997543222 223557789888765
Q ss_pred ----CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCCc
Q 042825 473 ----GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENGK 524 (631)
Q Consensus 473 ----gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~~ 524 (631)
|+|..++.. .....+++.....++.+++.| +.++|+|||+++......
T Consensus 81 ~~~~~~L~~~~~~---~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~- 156 (285)
T cd05605 81 LMNGGDLKFHIYN---MGNPGFDEERAVFYAAEITCGLEDLHRERIVYRDLKPENILLDDYGHIRISDLGLAVEIPEGE- 156 (285)
T ss_pred ccCCCcHHHHHHh---cCcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHEEECCCCCEEEeeCCCceecCCCC-
Confidence 555555532 223457888888888888765 457899999998763211
Q ss_pred cccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHhHhh-----hcCChhHH
Q 042825 525 HSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQKM-----HKNHDTFQ 599 (631)
Q Consensus 525 ~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~~~~-----~~~~~~l~ 599 (631)
......|+..|+|||++.+..++.++||||+||++|||++|+.||.+..... ....+....... ...+..+.
T Consensus 157 --~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (285)
T cd05605 157 --TIRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKV-KREEVERRVKEDQEEYSEKFSEAAR 233 (285)
T ss_pred --ccccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhh-HHHHHHHHhhhcccccCcccCHHHH
Confidence 1234578999999999988889999999999999999999999998643321 111122222111 11346789
Q ss_pred HHHHhhcCCChhhHH-----hHHHHHHH
Q 042825 600 MAIDKTIQLDEENLA-----NVSTVAEL 622 (631)
Q Consensus 600 ~~id~~L~~d~~~r~-----~~~~vl~l 622 (631)
+++.+|+..||.+|+ ++.++++.
T Consensus 234 ~li~~~l~~~P~~R~~~~~~~~~~l~~~ 261 (285)
T cd05605 234 SICRQLLTKDPGFRLGCRGEGAEEVKAH 261 (285)
T ss_pred HHHHHHccCCHHHhcCCCCCCHHHHhcC
Confidence 999999999999999 77777653
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, |
| >cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1 | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.8e-20 Score=191.80 Aligned_cols=192 Identities=22% Similarity=0.333 Sum_probs=136.5
Q ss_pred ecCCCceEEEEEEec-CCcEEEEEEEecCCCC-HHHHHHHHHHHHHHhc----------------------------CCh
Q 042825 426 LGRGGVGTVYKGELK-DGTEVGVKRMELGSVT-EQGIAQFESEITVLTK----------------------------GTL 475 (631)
Q Consensus 426 iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~-~~~~~~~~~Ei~~l~~----------------------------gsL 475 (631)
||+|+||+||++... +|+.||||++...... ....+.+..|++++.+ |+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L 80 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDL 80 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCH
Confidence 699999999999865 6899999999754322 2234567788888765 556
Q ss_pred hHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCCcccccccc
Q 042825 476 GRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENGKHSILTKV 531 (631)
Q Consensus 476 ~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~~~~~~~~~ 531 (631)
..++.... .....+++.....++.+++.| +.++|+|||+++.+.... ......
T Consensus 81 ~~~~~~~~-~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~--~~~~~~ 157 (280)
T cd05608 81 RYHIYNVD-EENPGFPEPRACFYTAQIISGLEHLHQRRIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQ--SKTKGY 157 (280)
T ss_pred HHHHHhcc-ccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCccceecCCCC--cccccc
Confidence 55553211 123457888888888777765 457899999998764221 123346
Q ss_pred ccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHh-Hh----hhcCChhHHHHHHhhc
Q 042825 532 AGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWF-QK----MHKNHDTFQMAIDKTI 606 (631)
Q Consensus 532 ~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~-~~----~~~~~~~l~~~id~~L 606 (631)
.||+.|+|||++.+..++.++|||||||++|||++|+.||.......... .+.... .. ....+.++.+++.++|
T Consensus 158 ~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~li~~~l 236 (280)
T cd05608 158 AGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENK-ELKQRILNDSVTYPDKFSPASKSFCEALL 236 (280)
T ss_pred CCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchhHH-HHHHhhcccCCCCcccCCHHHHHHHHHHh
Confidence 79999999999999999999999999999999999999997543321111 111111 11 1123467899999999
Q ss_pred CCChhhHH-----hHHHHHH
Q 042825 607 QLDEENLA-----NVSTVAE 621 (631)
Q Consensus 607 ~~d~~~r~-----~~~~vl~ 621 (631)
..||++|+ ++.++++
T Consensus 237 ~~~P~~R~~~~~~~~~~~l~ 256 (280)
T cd05608 237 AKDPEKRLGFRDGNCDGLRT 256 (280)
T ss_pred cCCHHHhcCCCCCCHHHHhc
Confidence 99999999 5566554
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g |
| >KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.85 E-value=3.1e-21 Score=204.07 Aligned_cols=192 Identities=20% Similarity=0.301 Sum_probs=140.6
Q ss_pred cceeecCCCceEEEEEEecC--Cc--EEEEEEEecCCCCHHHHHHHHHHHHHHhc-------------------------
Q 042825 422 EENRLGRGGVGTVYKGELKD--GT--EVGVKRMELGSVTEQGIAQFESEITVLTK------------------------- 472 (631)
Q Consensus 422 ~~~~iG~G~fg~Vyk~~~~~--g~--~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~------------------------- 472 (631)
..++||+|+||.|++|.|.. |+ .||||.++...... ...+|.+|+.+|.+
T Consensus 114 l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~-~mddflrEas~M~~L~H~hliRLyGvVl~qp~mMV~ELa 192 (1039)
T KOG0199|consen 114 LYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNA-IMDDFLREASHMLKLQHPHLIRLYGVVLDQPAMMVFELA 192 (1039)
T ss_pred HHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccch-hHHHHHHHHHHHHhccCcceeEEeeeeccchhhHHhhhc
Confidence 45899999999999999873 44 68999998876543 67899999999876
Q ss_pred --CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCCccc
Q 042825 473 --GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENGKHS 526 (631)
Q Consensus 473 --gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~~~~ 526 (631)
|+|.+.|+. .....|--......+.++|.| ..+||+|||+.|.+.......
T Consensus 193 plGSLldrLrk---a~~~~llv~~Lcdya~QiA~aM~YLeskrlvHRDLAARNlllasprtVKI~DFGLmRaLg~ned~Y 269 (1039)
T KOG0199|consen 193 PLGSLLDRLRK---AKKAILLVSRLCDYAMQIAKAMQYLESKRLVHRDLAARNLLLASPRTVKICDFGLMRALGENEDMY 269 (1039)
T ss_pred ccchHHHHHhh---ccccceeHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhheecccceeeeecccceeccCCCCcce
Confidence 788777764 111223333333445555554 568999999999987554433
Q ss_pred cc-cccccCcccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChHHHHHHHHHhHhhhc----CChhHHH
Q 042825 527 IL-TKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT-GRKVVDATHSDPEYIIHLATWFQKMHK----NHDTFQM 600 (631)
Q Consensus 527 ~~-~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~Ellt-G~~P~~~~~~~~~~~~~l~~~~~~~~~----~~~~l~~ 600 (631)
.+ ....-.+.|.|||.+...+|+.++|||+|||.+|||+| |+.||.+.... ...+..+ ....+. -++++-+
T Consensus 270 vm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~--qIL~~iD-~~erLpRPk~csedIY~ 346 (1039)
T KOG0199|consen 270 VMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGI--QILKNID-AGERLPRPKYCSEDIYQ 346 (1039)
T ss_pred EecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCHH--HHHHhcc-ccccCCCCCCChHHHHH
Confidence 32 33456789999999999999999999999999999999 89999876432 3333333 222222 2357788
Q ss_pred HHHhhcCCChhhHHhHHHHH
Q 042825 601 AIDKTIQLDEENLANVSTVA 620 (631)
Q Consensus 601 ~id~~L~~d~~~r~~~~~vl 620 (631)
+...|+...|++|+++..+.
T Consensus 347 imk~cWah~paDRptFsair 366 (1039)
T KOG0199|consen 347 IMKNCWAHNPADRPTFSAIR 366 (1039)
T ss_pred HHHHhccCCccccccHHHHH
Confidence 88888889999999987764
|
|
| >cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4 | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.5e-20 Score=192.95 Aligned_cols=196 Identities=19% Similarity=0.282 Sum_probs=135.0
Q ss_pred CcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc-------------------------
Q 042825 419 NFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK------------------------- 472 (631)
Q Consensus 419 ~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~------------------------- 472 (631)
+|+..+.||+|+||+||+|+.. +++.||+|.++...........+.+|++++.+
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~ 80 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRET 80 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCc
Confidence 4778899999999999999976 58999999987543222222344556555432
Q ss_pred ----------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccc
Q 042825 473 ----------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRL 518 (631)
Q Consensus 473 ----------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~ 518 (631)
+++..++.. .....+++.....++.+++.| +.+||+|||+++.
T Consensus 81 ~~~lv~e~~~~~l~~~~~~---~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~~~kl~dfg~~~~ 157 (288)
T cd07863 81 KVTLVFEHVDQDLRTYLDK---VPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGQVKLADFGLARI 157 (288)
T ss_pred eEEEEEcccccCHHHHHHh---cCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECccCcccc
Confidence 112222211 112347777778888777765 4578999999987
Q ss_pred cCCCCccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHH---------HhH
Q 042825 519 VPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLAT---------WFQ 589 (631)
Q Consensus 519 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~---------~~~ 589 (631)
.... .......||..|+|||++.+..++.++||||+||++|||++|++||....... ....+.. |..
T Consensus 158 ~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~-~~~~~~~~~~~~~~~~~~~ 233 (288)
T cd07863 158 YSCQ---MALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEAD-QLGKIFDLIGLPPEDDWPR 233 (288)
T ss_pred ccCc---ccCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHH-HHHHHHHHhCCCChhhCcc
Confidence 6321 12234578999999999988889999999999999999999999997543321 1111111 110
Q ss_pred ------------------hh-hcCChhHHHHHHhhcCCChhhHHhHHHHHH
Q 042825 590 ------------------KM-HKNHDTFQMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 590 ------------------~~-~~~~~~l~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
.. ...++.+.+++.++|..||++|+++.++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~ 284 (288)
T cd07863 234 DVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQ 284 (288)
T ss_pred cccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 00 112356789999999999999999998764
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou |
| >cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha | Back alignment and domain information |
|---|
Probab=99.85 E-value=2e-20 Score=200.69 Aligned_cols=211 Identities=20% Similarity=0.286 Sum_probs=150.8
Q ss_pred hcCCcccceeecCCCceEEEEEEec------CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc-----------------
Q 042825 416 ATNNFSEENRLGRGGVGTVYKGELK------DGTEVGVKRMELGSVTEQGIAQFESEITVLTK----------------- 472 (631)
Q Consensus 416 ~t~~f~~~~~iG~G~fg~Vyk~~~~------~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~----------------- 472 (631)
..++|...+.||+|+||.||+|+.. .+..||||++.... .....+.|.+|++++.+
T Consensus 35 ~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~-~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~ 113 (400)
T cd05105 35 PRDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTA-RSSEKQALMSELKIMTHLGPHLNIVNLLGACTKS 113 (400)
T ss_pred cccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCC-ChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccC
Confidence 3567888999999999999999853 13479999996543 33455779999998864
Q ss_pred ------------CChhHHhHhhhh--------------------------------------------------------
Q 042825 473 ------------GTLGRHLFNWEE-------------------------------------------------------- 484 (631)
Q Consensus 473 ------------gsL~~~L~~~~~-------------------------------------------------------- 484 (631)
|+|.++++....
T Consensus 114 ~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (400)
T cd05105 114 GPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPMLE 193 (400)
T ss_pred CceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhhh
Confidence 778777754210
Q ss_pred -----------------------------------cCCCCCCHHHHHHHHHHhhcC------------------------
Q 042825 485 -----------------------------------EGLEPLEWNTRLNIALDVARG------------------------ 505 (631)
Q Consensus 485 -----------------------------------~~~~~L~~~~~~~I~~~ia~g------------------------ 505 (631)
.....+++.....++.++++|
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dikp~Nill~~~ 273 (400)
T cd05105 194 IKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASKNCVHRDLAARNVLLAQG 273 (400)
T ss_pred hhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHhEEEeCC
Confidence 011347888888888888876
Q ss_pred CCcEEEeeccccccCCCCccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChHHHHHH
Q 042825 506 DDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT-GRKVVDATHSDPEYIIHL 584 (631)
Q Consensus 506 ~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~Ellt-G~~P~~~~~~~~~~~~~l 584 (631)
..+||+|||+++...............++..|+|||++.+..++.++|||||||++|||++ |+.||.....+......+
T Consensus 274 ~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~~~~~~~ 353 (400)
T cd05105 274 KIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDSTFYNKI 353 (400)
T ss_pred CEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchhHHHHHHH
Confidence 3468999999987642222222233457789999999988889999999999999999997 999997643332111111
Q ss_pred HHHhHh--hhcCChhHHHHHHhhcCCChhhHHhHHHHHHHHHhhh
Q 042825 585 ATWFQK--MHKNHDTFQMAIDKTIQLDEENLANVSTVAELGDHCC 627 (631)
Q Consensus 585 ~~~~~~--~~~~~~~l~~~id~~L~~d~~~r~~~~~vl~lal~C~ 627 (631)
....+. ......++.+++.+|+..+|++||++.++.++-..+.
T Consensus 354 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~~l~ 398 (400)
T cd05105 354 KSGYRMAKPDHATQEVYDIMVKCWNSEPEKRPSFLHLSDIVESLL 398 (400)
T ss_pred hcCCCCCCCccCCHHHHHHHHHHCccCHhHCcCHHHHHHHHHHHc
Confidence 111111 1122457899999999999999999999888765544
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF- |
| >cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta | Back alignment and domain information |
|---|
Probab=99.85 E-value=5.8e-21 Score=199.01 Aligned_cols=186 Identities=20% Similarity=0.298 Sum_probs=131.0
Q ss_pred eeecCCCceEEEEEEec-CCcEEEEEEEecCCC-CHHHHHHHHHHHHHHhc-----------------------------
Q 042825 424 NRLGRGGVGTVYKGELK-DGTEVGVKRMELGSV-TEQGIAQFESEITVLTK----------------------------- 472 (631)
Q Consensus 424 ~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~-~~~~~~~~~~Ei~~l~~----------------------------- 472 (631)
+.||+|+||+||+|+.. +++.||||+++.... .....+.+..|..++..
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~ 80 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence 46999999999999976 478999999976421 11233455666666643
Q ss_pred CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCCccccc
Q 042825 473 GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENGKHSIL 528 (631)
Q Consensus 473 gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~~~~~~ 528 (631)
|+|.+++.. ...+++.....++.+++.| +.+||+|||+++..... ....
T Consensus 81 g~L~~~l~~-----~~~~~~~~~~~~~~qi~~al~~LH~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~--~~~~ 153 (316)
T cd05619 81 GDLMFHIQS-----CHKFDLPRATFYAAEIICGLQFLHSKGIVYRDLKLDNILLDTDGHIKIADFGMCKENMLG--DAKT 153 (316)
T ss_pred CcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCCCEEEccCCcceECCCC--CCce
Confidence 555555532 2357777777788777765 45789999999754211 1123
Q ss_pred cccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHhHh-hhcCChhHHHHHHhhcC
Q 042825 529 TKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQK-MHKNHDTFQMAIDKTIQ 607 (631)
Q Consensus 529 ~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~~~-~~~~~~~l~~~id~~L~ 607 (631)
....||..|+|||++.+..++.++|||||||++|||++|+.||....... ....+...... ....+.++.+++.+++.
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~li~~~l~ 232 (316)
T cd05619 154 CTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEE-LFQSIRMDNPCYPRWLTREAKDILVKLFV 232 (316)
T ss_pred eeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHHH-HHHHHHhCCCCCCccCCHHHHHHHHHHhc
Confidence 45679999999999998899999999999999999999999997643221 11111111100 11134678999999999
Q ss_pred CChhhHHhHH
Q 042825 608 LDEENLANVS 617 (631)
Q Consensus 608 ~d~~~r~~~~ 617 (631)
.+|.+|+++.
T Consensus 233 ~~P~~R~~~~ 242 (316)
T cd05619 233 REPERRLGVK 242 (316)
T ss_pred cCHhhcCCCh
Confidence 9999999886
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in |
| >cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta | Back alignment and domain information |
|---|
Probab=99.85 E-value=6e-21 Score=198.93 Aligned_cols=186 Identities=21% Similarity=0.298 Sum_probs=128.8
Q ss_pred eeecCCCceEEEEEEec-CCcEEEEEEEecCCC-CHHHHHHHHHHHHHHhc-----------------------------
Q 042825 424 NRLGRGGVGTVYKGELK-DGTEVGVKRMELGSV-TEQGIAQFESEITVLTK----------------------------- 472 (631)
Q Consensus 424 ~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~-~~~~~~~~~~Ei~~l~~----------------------------- 472 (631)
+.||+|+||.||+|+.. +++.||||+++.... .....+.+..|..++..
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~g 80 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 46999999999999975 488999999975422 12233445556555532
Q ss_pred CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCCccccc
Q 042825 473 GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENGKHSIL 528 (631)
Q Consensus 473 gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~~~~~~ 528 (631)
|+|..++.. ...++......++.+++.| +.+||+|||+++...... ...
T Consensus 81 g~L~~~~~~-----~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~--~~~ 153 (316)
T cd05592 81 GDLMFHIQS-----SGRFDEARARFYAAEIICGLQFLHKKGIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGE--GKA 153 (316)
T ss_pred CcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHeEECCCCCEEEccCcCCeECCCCC--Ccc
Confidence 455444421 2346666667777777665 457899999998653211 223
Q ss_pred cccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHhHh-hhcCChhHHHHHHhhcC
Q 042825 529 TKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQK-MHKNHDTFQMAIDKTIQ 607 (631)
Q Consensus 529 ~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~~~-~~~~~~~l~~~id~~L~ 607 (631)
...+||+.|+|||++.+..++.++|||||||++|||++|+.||.+..... ....+...... ....+.++.+++.++|.
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~ll~~~l~ 232 (316)
T cd05592 154 STFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDEDE-LFDSILNDRPHFPRWISKEAKDCLSKLFE 232 (316)
T ss_pred ccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCHHH-HHHHHHcCCCCCCCCCCHHHHHHHHHHcc
Confidence 45679999999999998899999999999999999999999998653321 11111111000 11124678999999999
Q ss_pred CChhhHHhHH
Q 042825 608 LDEENLANVS 617 (631)
Q Consensus 608 ~d~~~r~~~~ 617 (631)
.+|.+|+++.
T Consensus 233 ~~P~~R~~~~ 242 (316)
T cd05592 233 RDPTKRLGVD 242 (316)
T ss_pred CCHHHcCCCh
Confidence 9999999864
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp |
| >cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1 | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.3e-20 Score=200.52 Aligned_cols=204 Identities=16% Similarity=0.211 Sum_probs=141.0
Q ss_pred hcCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhcCChhHHh---------------
Q 042825 416 ATNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTKGTLGRHL--------------- 479 (631)
Q Consensus 416 ~t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~gsL~~~L--------------- 479 (631)
..++|...+.||+|+||.||+++.. .++.||||++..........+++.+|+.++........+
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~ 101 (364)
T cd07875 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEF 101 (364)
T ss_pred hhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeeccccccccc
Confidence 4568999999999999999999865 588999999976544444556788888887762111000
Q ss_pred ------Hhhhhc-----CCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCCc
Q 042825 480 ------FNWEEE-----GLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENGK 524 (631)
Q Consensus 480 ------~~~~~~-----~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~~ 524 (631)
.++... ....+++.....++.+++.| +.+||+|||+++.....
T Consensus 102 ~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~-- 179 (364)
T cd07875 102 QDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS-- 179 (364)
T ss_pred CeEEEEEeCCCCCHHHHHHhcCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEECCCCcEEEEeCCCccccCCC--
Confidence 000000 01235677777777777765 45789999999875321
Q ss_pred cccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHH------------------H
Q 042825 525 HSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLA------------------T 586 (631)
Q Consensus 525 ~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~------------------~ 586 (631)
.......||..|+|||++.+..++.++|||||||++|||++|+.||.+..........+. .
T Consensus 180 -~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (364)
T cd07875 180 -FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRT 258 (364)
T ss_pred -CcccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhhHHHHH
Confidence 123446789999999999998999999999999999999999999976432111110000 0
Q ss_pred HhHhh------------------------hcCChhHHHHHHhhcCCChhhHHhHHHHHHH
Q 042825 587 WFQKM------------------------HKNHDTFQMAIDKTIQLDEENLANVSTVAEL 622 (631)
Q Consensus 587 ~~~~~------------------------~~~~~~l~~~id~~L~~d~~~r~~~~~vl~l 622 (631)
++... .....++++++.+||+.||.+|+++.++++-
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~h 318 (364)
T cd07875 259 YVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 318 (364)
T ss_pred HHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 00000 0012467899999999999999999998763
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn |
| >cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase | Back alignment and domain information |
|---|
Probab=99.85 E-value=8.7e-21 Score=192.85 Aligned_cols=200 Identities=21% Similarity=0.310 Sum_probs=139.9
Q ss_pred HhhcCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc--------------------
Q 042825 414 RNATNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK-------------------- 472 (631)
Q Consensus 414 ~~~t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~-------------------- 472 (631)
+.+++.|+..+.||+|+||.||+|+.. +++.||+|++..... ....+.+|+.++.+
T Consensus 2 ~~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~---~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~ 78 (272)
T cd06637 2 RDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGD---EEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPP 78 (272)
T ss_pred CChhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCCc---cHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCC
Confidence 346677888999999999999999975 588999999875432 23566777776654
Q ss_pred ---------------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEee
Q 042825 473 ---------------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADF 513 (631)
Q Consensus 473 ---------------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DF 513 (631)
++|.+++.. .....+.|.....++.+++.+ +.++|+||
T Consensus 79 ~~~~~~~iv~e~~~~~~L~~~l~~---~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivh~dl~~~nili~~~~~~~l~Df 155 (272)
T cd06637 79 GMDDQLWLVMEFCGAGSVTDLIKN---TKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDF 155 (272)
T ss_pred CCCcEEEEEEEcCCCCcHHHHHHh---ccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHEEECCCCCEEEccC
Confidence 233333321 122457888888888888765 45789999
Q ss_pred ccccccCCCCccccccccccCcccccccccc-----cCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHh
Q 042825 514 GLVRLVPENGKHSILTKVAGTFGYLAPEYIV-----TGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWF 588 (631)
Q Consensus 514 Gla~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-----~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~ 588 (631)
|+++..... ........|+..|+|||++. ...++.++|||||||++|||++|+.||+................
T Consensus 156 g~~~~~~~~--~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~ 233 (272)
T cd06637 156 GVSAQLDRT--VGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPA 233 (272)
T ss_pred CCceecccc--cccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhcCCC
Confidence 999865321 12234467899999999986 34588899999999999999999999975432211111000000
Q ss_pred Hhh--hcCChhHHHHHHhhcCCChhhHHhHHHHHH
Q 042825 589 QKM--HKNHDTFQMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 589 ~~~--~~~~~~l~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
... ...+.++.+++.+|+..+|.+|+++.++++
T Consensus 234 ~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 268 (272)
T cd06637 234 PRLKSKKWSKKFQSFIESCLVKNHSQRPTTEQLMK 268 (272)
T ss_pred CCCCCCCcCHHHHHHHHHHcCCChhhCCCHHHHhh
Confidence 111 112368899999999999999999998875
|
Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ |
| >cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C | Back alignment and domain information |
|---|
Probab=99.85 E-value=5.9e-21 Score=199.16 Aligned_cols=190 Identities=19% Similarity=0.282 Sum_probs=134.2
Q ss_pred eeecCCCceEEEEEEec-CCcEEEEEEEecCCC-CHHHHHHHHHHHHHHhc-----------------------------
Q 042825 424 NRLGRGGVGTVYKGELK-DGTEVGVKRMELGSV-TEQGIAQFESEITVLTK----------------------------- 472 (631)
Q Consensus 424 ~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~-~~~~~~~~~~Ei~~l~~----------------------------- 472 (631)
+.||+|+||+||+|+.. +++.||||++..... .......+.+|++++..
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNG 80 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 46999999999999976 488999999975422 12334566777777643
Q ss_pred CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCCccccc
Q 042825 473 GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENGKHSIL 528 (631)
Q Consensus 473 gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~~~~~~ 528 (631)
|+|..++.. ...+++.....++.+++.| +.+||+|||+++...... ...
T Consensus 81 ~~L~~~~~~-----~~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~--~~~ 153 (318)
T cd05570 81 GDLMFHIQR-----SGRFDEPRARFYAAEIVLGLQFLHERGIIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGG--VTT 153 (318)
T ss_pred CCHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHhCCeEccCCCHHHeEECCCCcEEecccCCCeecCcCC--Ccc
Confidence 344443321 2357888888888887765 467899999997532111 123
Q ss_pred cccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHH-hHhhhcCChhHHHHHHhhcC
Q 042825 529 TKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATW-FQKMHKNHDTFQMAIDKTIQ 607 (631)
Q Consensus 529 ~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~-~~~~~~~~~~l~~~id~~L~ 607 (631)
...+||..|+|||++.+..++.++|||||||++|||++|+.||....... ....+... .......+.++.+++.++|.
T Consensus 154 ~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~li~~~l~ 232 (318)
T cd05570 154 STFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDEDE-LFQSILEDEVRYPRWLSKEAKSILKSFLT 232 (318)
T ss_pred cceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCHHH-HHHHHHcCCCCCCCcCCHHHHHHHHHHcc
Confidence 34579999999999999999999999999999999999999997543221 11111111 01111235678999999999
Q ss_pred CChhhHHhH-----HHHHH
Q 042825 608 LDEENLANV-----STVAE 621 (631)
Q Consensus 608 ~d~~~r~~~-----~~vl~ 621 (631)
.||.+|+++ .++++
T Consensus 233 ~dP~~R~s~~~~~~~~ll~ 251 (318)
T cd05570 233 KNPEKRLGCLPTGEQDIKG 251 (318)
T ss_pred CCHHHcCCCCCCCHHHHhc
Confidence 999999998 66553
|
Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re |
| >cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase) | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.4e-20 Score=192.35 Aligned_cols=201 Identities=21% Similarity=0.261 Sum_probs=148.6
Q ss_pred cCCcccceeecCCCceEEEEEEecC-----CcEEEEEEEecCCCCHHHHHHHHHHHHHHhc-------------------
Q 042825 417 TNNFSEENRLGRGGVGTVYKGELKD-----GTEVGVKRMELGSVTEQGIAQFESEITVLTK------------------- 472 (631)
Q Consensus 417 t~~f~~~~~iG~G~fg~Vyk~~~~~-----g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~------------------- 472 (631)
.++|...+.||+|+||.||+|...+ +..|++|++... ......+.+.+|+.++.+
T Consensus 5 ~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~-~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~ 83 (280)
T cd05043 5 RDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDH-ASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGEP 83 (280)
T ss_pred hhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCC-CCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCC
Confidence 4678888999999999999999765 688999988643 344556778899888765
Q ss_pred ----------CChhHHhHhhhhc---CCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeecc
Q 042825 473 ----------GTLGRHLFNWEEE---GLEPLEWNTRLNIALDVARG------------------------DDMRVADFGL 515 (631)
Q Consensus 473 ----------gsL~~~L~~~~~~---~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGl 515 (631)
|++.+++...... ....+.+.....++.+++.| ..+||+|||+
T Consensus 84 ~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~p~nil~~~~~~~kl~d~g~ 163 (280)
T cd05043 84 PFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRGVIHKDIAARNCVIDEELQVKITDNAL 163 (280)
T ss_pred CEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCHhhEEEcCCCcEEECCCCC
Confidence 5666665432111 11468899999999888876 4568999999
Q ss_pred ccccCCCCccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChHHHHHHHHHhHhh---
Q 042825 516 VRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT-GRKVVDATHSDPEYIIHLATWFQKM--- 591 (631)
Q Consensus 516 a~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~Ellt-G~~P~~~~~~~~~~~~~l~~~~~~~--- 591 (631)
++.+.............++..|+|||++....++.++|||||||++||+++ |+.||...... .+..+....
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~-----~~~~~~~~~~~~ 238 (280)
T cd05043 164 SRDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDPF-----EMAAYLKDGYRL 238 (280)
T ss_pred cccccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCHH-----HHHHHHHcCCCC
Confidence 987643322222233456788999999988889999999999999999999 99999754321 122222111
Q ss_pred ---hcCChhHHHHHHhhcCCChhhHHhHHHHHHHH
Q 042825 592 ---HKNHDTFQMAIDKTIQLDEENLANVSTVAELG 623 (631)
Q Consensus 592 ---~~~~~~l~~~id~~L~~d~~~r~~~~~vl~la 623 (631)
...++++.+++.+|+..+|++||++.++++..
T Consensus 239 ~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l 273 (280)
T cd05043 239 AQPINCPDELFAVMACCWALDPEERPSFSQLVQCL 273 (280)
T ss_pred CCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHH
Confidence 11246799999999999999999999988754
|
Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It |
| >PTZ00036 glycogen synthase kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.6e-20 Score=204.37 Aligned_cols=195 Identities=16% Similarity=0.264 Sum_probs=134.6
Q ss_pred hcCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc----------------------
Q 042825 416 ATNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK---------------------- 472 (631)
Q Consensus 416 ~t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~---------------------- 472 (631)
...+|...+.||+|+||.||+|+.. +++.||||++.... ....+|+.++.+
T Consensus 64 ~~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~------~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~ 137 (440)
T PTZ00036 64 PNKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP------QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNE 137 (440)
T ss_pred cCCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc------chHHHHHHHHHhcCCCCCcceeeeEeecccccCC
Confidence 4567999999999999999999975 58899999986432 123456666655
Q ss_pred -------------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC-------------------------CCcEEEeec
Q 042825 473 -------------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG-------------------------DDMRVADFG 514 (631)
Q Consensus 473 -------------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g-------------------------~~~kl~DFG 514 (631)
+++.+++..+. .....+.+.....++.+++.| ..+||+|||
T Consensus 138 ~~~~l~lvmE~~~~~l~~~~~~~~-~~~~~l~~~~~~~~~~qi~~gL~yLH~~~IiHrDLKp~NILl~~~~~~vkL~DFG 216 (440)
T PTZ00036 138 KNIFLNVVMEFIPQTVHKYMKHYA-RNNHALPLFLVKLYSYQLCRALAYIHSKFICHRDLKPQNLLIDPNTHTLKLCDFG 216 (440)
T ss_pred CceEEEEEEecCCccHHHHHHHHh-hcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCcCHHHEEEcCCCCceeeeccc
Confidence 11222221111 122456677777777777665 247899999
Q ss_pred cccccCCCCccccccccccCcccccccccccC-CCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHh-----
Q 042825 515 LVRLVPENGKHSILTKVAGTFGYLAPEYIVTG-RITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWF----- 588 (631)
Q Consensus 515 la~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~----- 588 (631)
+|+.+.... ......||+.|+|||++.+. .|+.++|||||||++|||++|+.||.+....+. ...+....
T Consensus 217 la~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~-~~~i~~~~~~p~~ 292 (440)
T PTZ00036 217 SAKNLLAGQ---RSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQ-LVRIIQVLGTPTE 292 (440)
T ss_pred cchhccCCC---CcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHH-HHHHHHHhCCCCH
Confidence 998764221 22345789999999998654 699999999999999999999999986533211 11111100
Q ss_pred -----------------------Hhhh--cCChhHHHHHHhhcCCChhhHHhHHHHHH
Q 042825 589 -----------------------QKMH--KNHDTFQMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 589 -----------------------~~~~--~~~~~l~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
.... ..+.++.+++.+||..||.+|+++.++++
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~ 350 (440)
T PTZ00036 293 DQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALA 350 (440)
T ss_pred HHHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhC
Confidence 0001 12457899999999999999999988764
|
|
| >cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2 | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.7e-20 Score=199.09 Aligned_cols=204 Identities=18% Similarity=0.235 Sum_probs=140.7
Q ss_pred hcCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhcCChh---HH-------------
Q 042825 416 ATNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTKGTLG---RH------------- 478 (631)
Q Consensus 416 ~t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~gsL~---~~------------- 478 (631)
..++|...+.||+|+||.||+++.. +|+.||||++...........++.+|+.++..-... .+
T Consensus 19 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 98 (359)
T cd07876 19 VLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEF 98 (359)
T ss_pred hhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCcccc
Confidence 4578999999999999999999865 589999999976544444566788898888651110 00
Q ss_pred -----hHhhhhc-----CCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCCc
Q 042825 479 -----LFNWEEE-----GLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENGK 524 (631)
Q Consensus 479 -----L~~~~~~-----~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~~ 524 (631)
+.++... ....+++.....++.+++.| +.+||+|||+++.....
T Consensus 99 ~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~ivHrDlkp~NIl~~~~~~~kl~Dfg~a~~~~~~-- 176 (359)
T cd07876 99 QDVYLVMELMDANLCQVIHMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTACTN-- 176 (359)
T ss_pred ceeEEEEeCCCcCHHHHHhccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEecCCCccccccC--
Confidence 0000000 01235666666777777665 56789999999865321
Q ss_pred cccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHH--------------HH----HH
Q 042825 525 HSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYII--------------HL----AT 586 (631)
Q Consensus 525 ~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~--------------~l----~~ 586 (631)
.......||..|+|||++.+..++.++||||+||++|||++|+.||.+......... .+ ..
T Consensus 177 -~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (359)
T cd07876 177 -FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMNRLQPTVRN 255 (359)
T ss_pred -ccCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCcHHHHHHHHHHHHH
Confidence 223446789999999999998999999999999999999999999975432110000 00 00
Q ss_pred HhHhh------------------------hcCChhHHHHHHhhcCCChhhHHhHHHHHHH
Q 042825 587 WFQKM------------------------HKNHDTFQMAIDKTIQLDEENLANVSTVAEL 622 (631)
Q Consensus 587 ~~~~~------------------------~~~~~~l~~~id~~L~~d~~~r~~~~~vl~l 622 (631)
+.... ...++++++++.+||..||++|+++.++++-
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 315 (359)
T cd07876 256 YVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRH 315 (359)
T ss_pred HHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhcC
Confidence 00000 0012467899999999999999999998764
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn |
| >cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2 | Back alignment and domain information |
|---|
Probab=99.85 E-value=1e-20 Score=198.57 Aligned_cols=196 Identities=19% Similarity=0.262 Sum_probs=135.5
Q ss_pred CcccceeecCCCceEEEEEEec----CCcEEEEEEEecCCC--CHHHHHHHHHHHHHHhc--------------------
Q 042825 419 NFSEENRLGRGGVGTVYKGELK----DGTEVGVKRMELGSV--TEQGIAQFESEITVLTK-------------------- 472 (631)
Q Consensus 419 ~f~~~~~iG~G~fg~Vyk~~~~----~g~~vAvK~l~~~~~--~~~~~~~~~~Ei~~l~~-------------------- 472 (631)
+|+..+.||+|+||.||+++.. +++.||+|++..... .....+.+..|++++.+
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKL 80 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEE
Confidence 4778899999999999999753 588999999875321 11234567778877764
Q ss_pred ---------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeecccccc
Q 042825 473 ---------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLV 519 (631)
Q Consensus 473 ---------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~ 519 (631)
|+|.+++.. ...+.+.....++.+++.| +.+||+|||+++..
T Consensus 81 ~lv~e~~~~g~L~~~l~~-----~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nili~~~~~~kl~DfG~~~~~ 155 (332)
T cd05614 81 HLILDYVSGGEMFTHLYQ-----RDNFSEDEVRFYSGEIILALEHLHKLGIVYRDIKLENILLDSEGHVVLTDFGLSKEF 155 (332)
T ss_pred EEEEeCCCCCcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHeEECCCCCEEEeeCcCCccc
Confidence 445444432 2346677777777666655 56899999999865
Q ss_pred CCCCccccccccccCcccccccccccCC-CCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHhH----h-hhc
Q 042825 520 PENGKHSILTKVAGTFGYLAPEYIVTGR-ITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQ----K-MHK 593 (631)
Q Consensus 520 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~~----~-~~~ 593 (631)
.... ........||..|+|||++.+.. ++.++|||||||++|||+||+.||......... ..+..... . ...
T Consensus 156 ~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~-~~~~~~~~~~~~~~~~~ 233 (332)
T cd05614 156 LSEE-KERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQ-SEVSRRILKCDPPFPSF 233 (332)
T ss_pred cccC-CCccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCCH-HHHHHHHhcCCCCCCCC
Confidence 3222 12233467999999999987654 789999999999999999999999753322111 11111111 1 112
Q ss_pred CChhHHHHHHhhcCCChhhHH-----hHHHHHH
Q 042825 594 NHDTFQMAIDKTIQLDEENLA-----NVSTVAE 621 (631)
Q Consensus 594 ~~~~l~~~id~~L~~d~~~r~-----~~~~vl~ 621 (631)
.+..+.+++.++|..||++|+ ++.++++
T Consensus 234 ~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~ 266 (332)
T cd05614 234 IGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKE 266 (332)
T ss_pred CCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHc
Confidence 346789999999999999999 6666653
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph |
| >PHA03212 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=2.1e-20 Score=200.31 Aligned_cols=194 Identities=18% Similarity=0.192 Sum_probs=137.1
Q ss_pred cCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc-----------------------
Q 042825 417 TNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK----------------------- 472 (631)
Q Consensus 417 t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~----------------------- 472 (631)
.++|+..+.||+|+||.||+++.. +++.||+|+... ..+.+|++++.+
T Consensus 91 ~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~~--------~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~ 162 (391)
T PHA03212 91 KAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQR--------GGTATEAHILRAINHPSIIQLKGTFTYNKFTCLIL 162 (391)
T ss_pred cCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechhh--------hhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEE
Confidence 357999999999999999999965 588999996532 346788888876
Q ss_pred ----CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCCc
Q 042825 473 ----GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENGK 524 (631)
Q Consensus 473 ----gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~~ 524 (631)
+++..++. ....+.+.....|+.+++.| +.+||+|||+|+..... .
T Consensus 163 e~~~~~L~~~l~-----~~~~l~~~~~~~i~~qi~~aL~ylH~~~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~-~ 236 (391)
T PHA03212 163 PRYKTDLYCYLA-----AKRNIAICDILAIERSVLRAIQYLHENRIIHRDIKAENIFINHPGDVCLGDFGAACFPVDI-N 236 (391)
T ss_pred ecCCCCHHHHHH-----hcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHhEEEcCCCCEEEEeCCcccccccc-c
Confidence 33333332 12357788888888887765 45789999999764311 1
Q ss_pred cccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCC------ChHHHHH---------------
Q 042825 525 HSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHS------DPEYIIH--------------- 583 (631)
Q Consensus 525 ~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~------~~~~~~~--------------- 583 (631)
........||+.|+|||++.+..++.++|||||||++|||+||+.||..... .......
T Consensus 237 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~ 316 (391)
T PHA03212 237 ANKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPID 316 (391)
T ss_pred ccccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCcc
Confidence 1223456799999999999988999999999999999999999988643211 0000000
Q ss_pred ----HH----HHhH-------------hhhcCChhHHHHHHhhcCCChhhHHhHHHHHHHHH
Q 042825 584 ----LA----TWFQ-------------KMHKNHDTFQMAIDKTIQLDEENLANVSTVAELGD 624 (631)
Q Consensus 584 ----l~----~~~~-------------~~~~~~~~l~~~id~~L~~d~~~r~~~~~vl~lal 624 (631)
+. .+.. .....+.++.+++.+||..||.+|+++.++++.-.
T Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~hp~ 378 (391)
T PHA03212 317 AQANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLDFAA 378 (391)
T ss_pred hhHHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhcChh
Confidence 00 0000 00112346889999999999999999999887543
|
|
| >cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4 | Back alignment and domain information |
|---|
Probab=99.85 E-value=2.1e-20 Score=188.20 Aligned_cols=198 Identities=18% Similarity=0.279 Sum_probs=143.7
Q ss_pred CcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc-------------------------
Q 042825 419 NFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK------------------------- 472 (631)
Q Consensus 419 ~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~------------------------- 472 (631)
+|+..+.||+|+||.||++..+ +++.||+|++..........+.+.+|++++++
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e 80 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMG 80 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEec
Confidence 4788899999999999999965 47899999997655445556678888887765
Q ss_pred ----CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCCc
Q 042825 473 ----GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENGK 524 (631)
Q Consensus 473 ----gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~~ 524 (631)
+++.+++.. .....+.+.+...++.+++.+ +.++|+|||+++......
T Consensus 81 ~~~~~~l~~~l~~---~~~~~l~~~~~~~~~~~l~~~l~~lH~~~i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~~- 156 (257)
T cd08223 81 FCEGGDLYHKLKE---QKGKLLPENQVVEWFVQIAMALQYLHEKHILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQC- 156 (257)
T ss_pred ccCCCcHHHHHHH---hcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCchhEEEecCCcEEEecccceEEecccC-
Confidence 233333321 122357888888888887765 457899999998763221
Q ss_pred cccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHhHhh-hcCChhHHHHHH
Q 042825 525 HSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQKM-HKNHDTFQMAID 603 (631)
Q Consensus 525 ~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~~~~-~~~~~~l~~~id 603 (631)
.......|++.|+|||+..+..++.++|||||||+++||++|+.||+..............+.... ...+..+.+++.
T Consensus 157 -~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 235 (257)
T cd08223 157 -DMASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDMNSLVYRIIEGKLPPMPKDYSPELGELIA 235 (257)
T ss_pred -CccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCCCCccccCHHHHHHHH
Confidence 223345689999999999988899999999999999999999999975432211111111111111 123467899999
Q ss_pred hhcCCChhhHHhHHHHHH
Q 042825 604 KTIQLDEENLANVSTVAE 621 (631)
Q Consensus 604 ~~L~~d~~~r~~~~~vl~ 621 (631)
+++..+|.+|+++.++++
T Consensus 236 ~~l~~~p~~Rp~~~~~l~ 253 (257)
T cd08223 236 TMLSKRPEKRPSVKSILR 253 (257)
T ss_pred HHhccCcccCCCHHHHhc
Confidence 999999999999998875
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. |
| >cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3 | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.9e-20 Score=198.48 Aligned_cols=205 Identities=14% Similarity=0.195 Sum_probs=141.2
Q ss_pred hhcCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhcCChh---HH------------
Q 042825 415 NATNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTKGTLG---RH------------ 478 (631)
Q Consensus 415 ~~t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~gsL~---~~------------ 478 (631)
...++|...+.||+|+||.||+++.. .++.||||++..........+++.+|+.+++..... ..
T Consensus 14 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 93 (355)
T cd07874 14 TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEE 93 (355)
T ss_pred hhhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeeccccccc
Confidence 34578999999999999999999865 588999999976544444566788888887651110 00
Q ss_pred ------hHhhhhcC-----CCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCC
Q 042825 479 ------LFNWEEEG-----LEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENG 523 (631)
Q Consensus 479 ------L~~~~~~~-----~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~ 523 (631)
+.++.... ...+++.....++.+++.| +.+||+|||+++.....
T Consensus 94 ~~~~~lv~e~~~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDikp~Nill~~~~~~kl~Dfg~~~~~~~~- 172 (355)
T cd07874 94 FQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS- 172 (355)
T ss_pred cceeEEEhhhhcccHHHHHhhcCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEECCCCCEEEeeCcccccCCCc-
Confidence 00111000 1235666666777777665 46789999999865321
Q ss_pred ccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHH------------------H
Q 042825 524 KHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHL------------------A 585 (631)
Q Consensus 524 ~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l------------------~ 585 (631)
.......||..|+|||++.+..++.++|||||||++|||++|+.||.+..........+ .
T Consensus 173 --~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (355)
T cd07874 173 --FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVR 250 (355)
T ss_pred --cccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhcHHHH
Confidence 22344678999999999998899999999999999999999999997643211100000 0
Q ss_pred HHhHhh----------------h--------cCChhHHHHHHhhcCCChhhHHhHHHHHHH
Q 042825 586 TWFQKM----------------H--------KNHDTFQMAIDKTIQLDEENLANVSTVAEL 622 (631)
Q Consensus 586 ~~~~~~----------------~--------~~~~~l~~~id~~L~~d~~~r~~~~~vl~l 622 (631)
.+.... . ....++.+++.+||..||++|+++.++++-
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~h 311 (355)
T cd07874 251 NYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQH 311 (355)
T ss_pred HHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcC
Confidence 010000 0 012457899999999999999999998863
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok |
| >cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7 | Back alignment and domain information |
|---|
Probab=99.84 E-value=2.5e-20 Score=188.87 Aligned_cols=207 Identities=19% Similarity=0.315 Sum_probs=149.9
Q ss_pred CCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCC-CHHHHHHHHHHHHHHhc-----------------------
Q 042825 418 NNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSV-TEQGIAQFESEITVLTK----------------------- 472 (631)
Q Consensus 418 ~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~-~~~~~~~~~~Ei~~l~~----------------------- 472 (631)
++|+..+.||+|+||.||+++.. +++.+|||.+..... ......++.+|+.++..
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL 81 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEE
Confidence 46788899999999999999954 789999998865432 23445678889888765
Q ss_pred -----CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCC
Q 042825 473 -----GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENG 523 (631)
Q Consensus 473 -----gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~ 523 (631)
++|.+++.... .....+++.....++.+++++ +.++|+|||+++......
T Consensus 82 e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~ 160 (267)
T cd08229 82 ELADAGDLSRMIKHFK-KQKRLIPEKTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKT 160 (267)
T ss_pred EecCCCCHHHHHHHhh-ccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEECcchhhhccccCC
Confidence 45555554321 223457888888888887765 457899999998764221
Q ss_pred ccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHH-HHHHHhHhh---hcCChhHH
Q 042825 524 KHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYII-HLATWFQKM---HKNHDTFQ 599 (631)
Q Consensus 524 ~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~-~l~~~~~~~---~~~~~~l~ 599 (631)
.......|+..|+|||+..+..++.++||||||+++|||++|..||........... .+....... ...++++.
T Consensus 161 --~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (267)
T cd08229 161 --TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYSEELR 238 (267)
T ss_pred --cccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccchHHHHhhhhhcCCCCCCCcccccHHHH
Confidence 122345789999999999888899999999999999999999999975433211111 111100000 11235799
Q ss_pred HHHHhhcCCChhhHHhHHHHHHHHHhhh
Q 042825 600 MAIDKTIQLDEENLANVSTVAELGDHCC 627 (631)
Q Consensus 600 ~~id~~L~~d~~~r~~~~~vl~lal~C~ 627 (631)
+++.+|+..+|.+||++.++.+++..+-
T Consensus 239 ~li~~~l~~~p~~Rpt~~~i~~~~~~~~ 266 (267)
T cd08229 239 QLVNMCINPDPEKRPDITYVYDVAKRMH 266 (267)
T ss_pred HHHHHhcCCCcccCCCHHHHHHHHhhhc
Confidence 9999999999999999999999887663
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. |
| >KOG0589 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.84 E-value=3.3e-21 Score=200.23 Aligned_cols=203 Identities=19% Similarity=0.308 Sum_probs=149.5
Q ss_pred cCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc-----------------------
Q 042825 417 TNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK----------------------- 472 (631)
Q Consensus 417 t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~----------------------- 472 (631)
.++|...+++|+|+||.++.++.+ +++.+++|++.....+...++....|+.++++
T Consensus 3 m~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Iv 82 (426)
T KOG0589|consen 3 MDNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIV 82 (426)
T ss_pred cchhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEE
Confidence 357888899999999999999876 58899999999888888888889999999986
Q ss_pred ------CChhHHhHhhhh---cCCCCCCHHHHHHHHHHhhc----------C--------CCcEEEeeccccccCCCCcc
Q 042825 473 ------GTLGRHLFNWEE---EGLEPLEWNTRLNIALDVAR----------G--------DDMRVADFGLVRLVPENGKH 525 (631)
Q Consensus 473 ------gsL~~~L~~~~~---~~~~~L~~~~~~~I~~~ia~----------g--------~~~kl~DFGla~~~~~~~~~ 525 (631)
|++.+.+..... .......|...+..++...+ . ..+||+|||+||.+.++.
T Consensus 83 m~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~~-- 160 (426)
T KOG0589|consen 83 MEYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHENRVLHRDLKCANIFLTKDKKVKLGDFGLAKILNPED-- 160 (426)
T ss_pred EeecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhhhhhcccchhhhhhccccCceeecchhhhhhcCCch--
Confidence 777776654220 00112233333333333222 1 567999999999986432
Q ss_pred ccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHhHh-hhcCChhHHHHHHh
Q 042825 526 SILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQK-MHKNHDTFQMAIDK 604 (631)
Q Consensus 526 ~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~~~-~~~~~~~l~~~id~ 604 (631)
.....++||+.||.||.+.+..|..|+||||+||++|||++-+++|...+........+..-... ....+.+++.+|..
T Consensus 161 ~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~~Li~ki~~~~~~Plp~~ys~el~~lv~~ 240 (426)
T KOG0589|consen 161 SLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNMSELILKINRGLYSPLPSMYSSELRSLVKS 240 (426)
T ss_pred hhhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccchHHHHHHHhhccCCCCCccccHHHHHHHHH
Confidence 34567899999999999999999999999999999999999999998764432111111111111 11224689999999
Q ss_pred hcCCChhhHHhHHHHHH
Q 042825 605 TIQLDEENLANVSTVAE 621 (631)
Q Consensus 605 ~L~~d~~~r~~~~~vl~ 621 (631)
+++.+|+.||++.+++.
T Consensus 241 ~l~~~P~~RPsa~~LL~ 257 (426)
T KOG0589|consen 241 MLRKNPEHRPSALELLR 257 (426)
T ss_pred HhhcCCccCCCHHHHhh
Confidence 99999999999998764
|
|
| >cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha | Back alignment and domain information |
|---|
Probab=99.84 E-value=3e-21 Score=202.03 Aligned_cols=191 Identities=18% Similarity=0.278 Sum_probs=134.5
Q ss_pred eeecCCCceEEEEEEec-CCcEEEEEEEecCCC-CHHHHHHHHHHHHHHhc----------------------------C
Q 042825 424 NRLGRGGVGTVYKGELK-DGTEVGVKRMELGSV-TEQGIAQFESEITVLTK----------------------------G 473 (631)
Q Consensus 424 ~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~-~~~~~~~~~~Ei~~l~~----------------------------g 473 (631)
+.||+|+||.||+++.. +|+.||+|.+..... ......++..|++++.. |
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCC
Confidence 46999999999999865 689999999975432 22344567788887754 4
Q ss_pred ChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC-------------------------CCcEEEeeccccccCCCCccccc
Q 042825 474 TLGRHLFNWEEEGLEPLEWNTRLNIALDVARG-------------------------DDMRVADFGLVRLVPENGKHSIL 528 (631)
Q Consensus 474 sL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g-------------------------~~~kl~DFGla~~~~~~~~~~~~ 528 (631)
+|..++.. ...+.+.....++.+++.| +.+||+|||+++...... ...
T Consensus 81 ~L~~~l~~-----~~~l~~~~~~~~~~qi~~aL~~lH~~~~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~--~~~ 153 (325)
T cd05594 81 ELFFHLSR-----ERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDG--ATM 153 (325)
T ss_pred cHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCCeEEECCCCCEEEecCCCCeecCCCC--ccc
Confidence 45444421 2357777777777766644 457899999997643111 123
Q ss_pred cccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHhHhhhcCChhHHHHHHhhcCC
Q 042825 529 TKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQKMHKNHDTFQMAIDKTIQL 608 (631)
Q Consensus 529 ~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~id~~L~~ 608 (631)
....||+.|+|||++.+..++.++|||||||++|||+||+.||.......................+.++.+++.++|..
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~li~~~L~~ 233 (325)
T cd05594 154 KTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLSPEAKSLLSGLLKK 233 (325)
T ss_pred ccccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHhhc
Confidence 34679999999999998899999999999999999999999997543221111111111111112356899999999999
Q ss_pred ChhhHH-----hHHHHHH
Q 042825 609 DEENLA-----NVSTVAE 621 (631)
Q Consensus 609 d~~~r~-----~~~~vl~ 621 (631)
||.+|. ++.++++
T Consensus 234 dP~~R~~~~~~~~~~il~ 251 (325)
T cd05594 234 DPKQRLGGGPDDAKEIMQ 251 (325)
T ss_pred CHHHhCCCCCCCHHHHhc
Confidence 999996 7777654
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien |
| >cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6 | Back alignment and domain information |
|---|
Probab=99.84 E-value=4.4e-20 Score=187.10 Aligned_cols=201 Identities=18% Similarity=0.313 Sum_probs=146.6
Q ss_pred CCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCC-CCHHHHHHHHHHHHHHhc-----------------------
Q 042825 418 NNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGS-VTEQGIAQFESEITVLTK----------------------- 472 (631)
Q Consensus 418 ~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~-~~~~~~~~~~~Ei~~l~~----------------------- 472 (631)
++|+..+.||+|+||.||+|+.. +++.||||++.... .......++.+|++++++
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVL 81 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEE
Confidence 57888999999999999999965 68999999886532 234455678899998876
Q ss_pred -----CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCC
Q 042825 473 -----GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENG 523 (631)
Q Consensus 473 -----gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~ 523 (631)
|+|.+++..+. .....++......++.++++| +.++|+|||+++.....
T Consensus 82 e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~~- 159 (267)
T cd08228 82 ELADAGDLSQMIKYFK-KQKRLIPERTVWKYFVQLCSAVEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSK- 159 (267)
T ss_pred EecCCCcHHHHHHHhh-hccCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCCHHHEEEcCCCCEEECccccceeccch-
Confidence 45555554322 122446777777777777765 45789999999876422
Q ss_pred ccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHhHh-----h--hcCCh
Q 042825 524 KHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQK-----M--HKNHD 596 (631)
Q Consensus 524 ~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~~~-----~--~~~~~ 596 (631)
........|+..|+|||++.+..++.++||||||+++|||++|+.||......... +...+.. . ...+.
T Consensus 160 -~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 235 (267)
T cd08228 160 -TTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFS---LCQKIEQCDYPPLPTEHYSE 235 (267)
T ss_pred -hHHHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccccHHH---HHHHHhcCCCCCCChhhcCH
Confidence 12223457889999999998888999999999999999999999999754332111 1111111 0 11235
Q ss_pred hHHHHHHhhcCCChhhHHhHHHHHHHHH
Q 042825 597 TFQMAIDKTIQLDEENLANVSTVAELGD 624 (631)
Q Consensus 597 ~l~~~id~~L~~d~~~r~~~~~vl~lal 624 (631)
.+.+++.+|+..+|.+||++.++++...
T Consensus 236 ~~~~li~~cl~~~p~~Rp~~~~vl~~~~ 263 (267)
T cd08228 236 KLRELVSMCIYPDPDQRPDIGYVHQIAK 263 (267)
T ss_pred HHHHHHHHHCCCCcccCcCHHHHHHHHH
Confidence 7899999999999999999999988643
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase |
| >cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1 | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.5e-20 Score=199.95 Aligned_cols=197 Identities=17% Similarity=0.273 Sum_probs=137.1
Q ss_pred CCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCC-CHHHHHHHHHHHHHHhc-----------------------
Q 042825 418 NNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSV-TEQGIAQFESEITVLTK----------------------- 472 (631)
Q Consensus 418 ~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~-~~~~~~~~~~Ei~~l~~----------------------- 472 (631)
++|+..+.||+|+||+||+++.. +++.||||++..... .......+.+|+.++.+
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~ 80 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIM 80 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEE
Confidence 47889999999999999999865 589999999975422 12334567788887765
Q ss_pred -----CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCC
Q 042825 473 -----GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENG 523 (631)
Q Consensus 473 -----gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~ 523 (631)
|+|.+++.. ...+++.....++.+++.| +.+||+|||+++.+....
T Consensus 81 E~~~gg~L~~~l~~-----~~~l~~~~~~~~~~qi~~aL~~lH~~givHrDlKp~NILi~~~~~vkL~DFGla~~~~~~~ 155 (363)
T cd05628 81 EFLPGGDMMTLLMK-----KDTLTEEETQFYIAETVLAIDSIHQLGFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAH 155 (363)
T ss_pred cCCCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCCCEEEeeccCcccccccc
Confidence 556555532 2356777777777666655 568899999997653110
Q ss_pred cc---------------------------------ccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCC
Q 042825 524 KH---------------------------------SILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKV 570 (631)
Q Consensus 524 ~~---------------------------------~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P 570 (631)
.. ......+||+.|+|||++.+..++.++|||||||++|||++|+.|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~P 235 (363)
T cd05628 156 RTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPP 235 (363)
T ss_pred cccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCCCC
Confidence 00 011245799999999999998999999999999999999999999
Q ss_pred CCCCCCChHHHHHHHHHhHh-----hhcCChhHHHHHHhhcCCChhhH---HhHHHHHH
Q 042825 571 VDATHSDPEYIIHLATWFQK-----MHKNHDTFQMAIDKTIQLDEENL---ANVSTVAE 621 (631)
Q Consensus 571 ~~~~~~~~~~~~~l~~~~~~-----~~~~~~~l~~~id~~L~~d~~~r---~~~~~vl~ 621 (631)
|.+....+ ....+..|... ....++++.+++.+++. ++.+| +++.++++
T Consensus 236 f~~~~~~~-~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~~-~~~~r~~r~~~~ei~~ 292 (363)
T cd05628 236 FCSETPQE-TYKKVMNWKETLIFPPEVPISEKAKDLILRFCC-EWEHRIGAPGVEEIKT 292 (363)
T ss_pred CCCCCHHH-HHHHHHcCcCcccCCCcCCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhC
Confidence 98654322 22233333211 11235678899988774 55544 57777654
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus |
| >cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Probab=99.84 E-value=7.9e-21 Score=198.63 Aligned_cols=190 Identities=20% Similarity=0.299 Sum_probs=129.8
Q ss_pred eeecCCCceEEEEEEec----CCcEEEEEEEecCCC--CHHHHHHHHHHHHHHhc-------------------------
Q 042825 424 NRLGRGGVGTVYKGELK----DGTEVGVKRMELGSV--TEQGIAQFESEITVLTK------------------------- 472 (631)
Q Consensus 424 ~~iG~G~fg~Vyk~~~~----~g~~vAvK~l~~~~~--~~~~~~~~~~Ei~~l~~------------------------- 472 (631)
+.||+|+||.||+++.. +++.||||.+..... .......+.+|++++..
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~ 81 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEY 81 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeC
Confidence 67999999999999853 578999999975322 12234567788888766
Q ss_pred ---CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCCcc
Q 042825 473 ---GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENGKH 525 (631)
Q Consensus 473 ---gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~~~ 525 (631)
|+|.+++.. ...+.+.....++.+++.| +.+||+|||+++......
T Consensus 82 ~~~~~L~~~~~~-----~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~-- 154 (323)
T cd05584 82 LSGGELFMHLER-----EGIFMEDTACFYLSEISLALEHLHQQGIIYRDLKPENILLDAQGHVKLTDFGLCKESIHEG-- 154 (323)
T ss_pred CCCchHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEeeCcCCeecccCC--
Confidence 344444421 1234454555555555544 568999999997543221
Q ss_pred ccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHhHh-hhcCChhHHHHHHh
Q 042825 526 SILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQK-MHKNHDTFQMAIDK 604 (631)
Q Consensus 526 ~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~~~-~~~~~~~l~~~id~ 604 (631)
.......||+.|+|||++.+..++.++|||||||++|||++|+.||....... ....+...... ....++++.+++.+
T Consensus 155 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~li~~ 233 (323)
T cd05584 155 TVTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRKK-TIDKILKGKLNLPPYLTPEARDLLKK 233 (323)
T ss_pred CcccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCHHH-HHHHHHcCCCCCCCCCCHHHHHHHHH
Confidence 12334679999999999988889999999999999999999999998643221 11111111000 11124678999999
Q ss_pred hcCCChhhHH-----hHHHHHH
Q 042825 605 TIQLDEENLA-----NVSTVAE 621 (631)
Q Consensus 605 ~L~~d~~~r~-----~~~~vl~ 621 (631)
++..+|++|+ .+.++++
T Consensus 234 ~l~~~p~~R~~~~~~~~~~l~~ 255 (323)
T cd05584 234 LLKRNPSSRLGAGPGDAAEVQS 255 (323)
T ss_pred HcccCHhHcCCCCCCCHHHHhc
Confidence 9999999998 6666654
|
Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in |
| >cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5 | Back alignment and domain information |
|---|
Probab=99.84 E-value=2.6e-20 Score=190.63 Aligned_cols=197 Identities=17% Similarity=0.266 Sum_probs=138.5
Q ss_pred CcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc-------------------------
Q 042825 419 NFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK------------------------- 472 (631)
Q Consensus 419 ~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~------------------------- 472 (631)
+|+..+.||+|+||.||+|+.. +|+.||+|++............+.+|++++.+
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 80 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEY 80 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEec
Confidence 4777899999999999999976 58999999997543333333567778887765
Q ss_pred --CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCCccc
Q 042825 473 --GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENGKHS 526 (631)
Q Consensus 473 --gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~~~~ 526 (631)
+++.+++. .....+++.....++.++++| +.+||+|||+++...... .
T Consensus 81 ~~~~l~~~~~----~~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~--~ 154 (284)
T cd07839 81 CDQDLKKYFD----SCNGDIDPEIVKSFMFQLLKGLAFCHSHNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPV--R 154 (284)
T ss_pred CCCCHHHHHH----hcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEcCCCcEEECccchhhccCCCC--C
Confidence 33333332 122457888888888888875 457899999998653221 1
Q ss_pred cccccccCcccccccccccCC-CCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHH---------H---------
Q 042825 527 ILTKVAGTFGYLAPEYIVTGR-ITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLAT---------W--------- 587 (631)
Q Consensus 527 ~~~~~~gt~~Y~aPE~~~~~~-~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~---------~--------- 587 (631)
......++..|+|||++.+.. ++.++|||||||++|||+||+.|+............+.. |
T Consensus 155 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (284)
T cd07839 155 CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSKLPDY 234 (284)
T ss_pred CcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCChHHhHHhhhcccc
Confidence 223456789999999987654 789999999999999999999986543322211111110 1
Q ss_pred ------------hHhhhcCChhHHHHHHhhcCCChhhHHhHHHHHH
Q 042825 588 ------------FQKMHKNHDTFQMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 588 ------------~~~~~~~~~~l~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
.......++++.++|.+||..||.+|+++.++++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~ 280 (284)
T cd07839 235 KPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQ 280 (284)
T ss_pred cccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhc
Confidence 1111123467889999999999999999998865
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also |
| >cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.7e-20 Score=191.46 Aligned_cols=206 Identities=21% Similarity=0.295 Sum_probs=144.9
Q ss_pred hcCCcccceeecCCCceEEEEEEec------CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc-----------------
Q 042825 416 ATNNFSEENRLGRGGVGTVYKGELK------DGTEVGVKRMELGSVTEQGIAQFESEITVLTK----------------- 472 (631)
Q Consensus 416 ~t~~f~~~~~iG~G~fg~Vyk~~~~------~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~----------------- 472 (631)
.+++|+..+.||+|+||.||+|... .+..||||++.... ......+|.+|+.++.+
T Consensus 4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~-~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~ 82 (277)
T cd05062 4 AREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAA-SMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQ 82 (277)
T ss_pred cHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccC-CHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCC
Confidence 4567999999999999999999753 25679999986533 23345678899888765
Q ss_pred -----------CChhHHhHhhhhc-----CCCCCCHHHHHHHHHHhhcC------------------------CCcEEEe
Q 042825 473 -----------GTLGRHLFNWEEE-----GLEPLEWNTRLNIALDVARG------------------------DDMRVAD 512 (631)
Q Consensus 473 -----------gsL~~~L~~~~~~-----~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~D 512 (631)
|+|.+++...... ....++|.....++.+++.+ +.++|+|
T Consensus 83 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~vH~dlkp~Nil~~~~~~~~l~d 162 (277)
T cd05062 83 PTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGD 162 (277)
T ss_pred CeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCcchheEEEcCCCCEEECC
Confidence 6677766532111 12346788888888787765 4578999
Q ss_pred eccccccCCCCccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChHHHHHHHHHh-Hh
Q 042825 513 FGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT-GRKVVDATHSDPEYIIHLATWF-QK 590 (631)
Q Consensus 513 FGla~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~Ellt-G~~P~~~~~~~~~~~~~l~~~~-~~ 590 (631)
||+++...............++..|+|||++.+..++.++|||||||++|||++ |+.||................. ..
T Consensus 163 fg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 242 (277)
T cd05062 163 FGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNEQVLRFVMEGGLLDK 242 (277)
T ss_pred CCCccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCcCCC
Confidence 999986642222111223356788999999988889999999999999999999 7889876533211111111111 11
Q ss_pred hhcCChhHHHHHHhhcCCChhhHHhHHHHHHH
Q 042825 591 MHKNHDTFQMAIDKTIQLDEENLANVSTVAEL 622 (631)
Q Consensus 591 ~~~~~~~l~~~id~~L~~d~~~r~~~~~vl~l 622 (631)
.....+.+.+++.+|++.+|.+|+++.++++.
T Consensus 243 ~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~ 274 (277)
T cd05062 243 PDNCPDMLFELMRMCWQYNPKMRPSFLEIISS 274 (277)
T ss_pred CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 11224578999999999999999999998875
|
Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh |
| >KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.84 E-value=3.5e-22 Score=192.34 Aligned_cols=196 Identities=20% Similarity=0.297 Sum_probs=139.1
Q ss_pred CcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc-------------------------
Q 042825 419 NFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK------------------------- 472 (631)
Q Consensus 419 ~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~------------------------- 472 (631)
-|++..+||+|+||.|||+.++ .|+.||||++..+ ...++...||.+|..
T Consensus 34 VFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~----sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEY 109 (502)
T KOG0574|consen 34 VFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVD----TDLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEY 109 (502)
T ss_pred HHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCcc----chHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehhh
Confidence 3677889999999999999876 5999999998654 356788999999876
Q ss_pred ---CChhHHhHhh------------hhcCCCCCCHHHHHHHHHHhhcC--------CCcEEEeeccccccCCCCcccccc
Q 042825 473 ---GTLGRHLFNW------------EEEGLEPLEWNTRLNIALDVARG--------DDMRVADFGLVRLVPENGKHSILT 529 (631)
Q Consensus 473 ---gsL~~~L~~~------------~~~~~~~L~~~~~~~I~~~ia~g--------~~~kl~DFGla~~~~~~~~~~~~~ 529 (631)
|+..+.+... .....+.|.+.|-++-++...++ +..|++|||+|..+. ++.....
T Consensus 110 CGAGSiSDI~R~R~K~L~E~EIs~iL~~TLKGL~YLH~~~KIHRDIKAGNILLNT~G~AKLADFGVAGQLT--DTMAKRN 187 (502)
T KOG0574|consen 110 CGAGSISDIMRARRKPLSEQEISAVLRDTLKGLQYLHDLKKIHRDIKAGNILLNTDGIAKLADFGVAGQLT--DTMAKRN 187 (502)
T ss_pred cCCCcHHHHHHHhcCCccHHHHHHHHHHHHhHHHHHHHHHHHHhhcccccEEEcccchhhhhhccccchhh--hhHHhhC
Confidence 4444443211 01123345555554433333333 456899999998774 2333456
Q ss_pred ccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHh----HhhhcCChhHHHHHHhh
Q 042825 530 KVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWF----QKMHKNHDTFQMAIDKT 605 (631)
Q Consensus 530 ~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~----~~~~~~~~~l~~~id~~ 605 (631)
++.||+.|||||++..-.|+.++||||+|+...||.-|++||.+..+...-. -+..-. +....-++++.|+|..|
T Consensus 188 TVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMRAIF-MIPT~PPPTF~KPE~WS~~F~DFi~~C 266 (502)
T KOG0574|consen 188 TVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMRAIF-MIPTKPPPTFKKPEEWSSEFNDFIRSC 266 (502)
T ss_pred ccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccccccceeE-eccCCCCCCCCChHhhhhHHHHHHHHH
Confidence 7899999999999999999999999999999999999999998654321100 011111 11111146789999999
Q ss_pred cCCChhhHHhHHHHHH
Q 042825 606 IQLDEENLANVSTVAE 621 (631)
Q Consensus 606 L~~d~~~r~~~~~vl~ 621 (631)
|...|++|.++.++++
T Consensus 267 LiK~PE~R~TA~~L~~ 282 (502)
T KOG0574|consen 267 LIKKPEERKTALRLCE 282 (502)
T ss_pred hcCCHHHHHHHHHHhh
Confidence 9999999999887664
|
|
| >cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.84 E-value=7.9e-21 Score=202.02 Aligned_cols=197 Identities=17% Similarity=0.310 Sum_probs=140.5
Q ss_pred CCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCC-CHHHHHHHHHHHHHHhc-----------------------
Q 042825 418 NNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSV-TEQGIAQFESEITVLTK----------------------- 472 (631)
Q Consensus 418 ~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~-~~~~~~~~~~Ei~~l~~----------------------- 472 (631)
++|+..+.||+|+||+||+|+.. +|+.||||++..... .......+.+|++++..
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIM 80 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEE
Confidence 47889999999999999999976 589999999975422 22344567888888875
Q ss_pred -----CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCC
Q 042825 473 -----GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENG 523 (631)
Q Consensus 473 -----gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~ 523 (631)
|+|.+++.. ...+.......++.+++.| +.+||+|||+++.+....
T Consensus 81 E~~~~g~L~~~l~~-----~~~l~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~ 155 (364)
T cd05599 81 EYLPGGDMMTLLMK-----KDTFTEEETRFYIAETILAIDSIHKLGYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSH 155 (364)
T ss_pred CCCCCcHHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEeecccceeccccc
Confidence 555555532 2346777777777777665 457899999997653111
Q ss_pred cc------------------------------------ccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcC
Q 042825 524 KH------------------------------------SILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITG 567 (631)
Q Consensus 524 ~~------------------------------------~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG 567 (631)
.. ......+||+.|+|||++....++.++|||||||++|||++|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~G 235 (364)
T cd05599 156 RTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLVG 235 (364)
T ss_pred cccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhhcC
Confidence 00 001124699999999999988999999999999999999999
Q ss_pred CCCCCCCCCChHHHHHHHHHhHhh-----hcCChhHHHHHHhhcCCChhhHHh---HHHHHH
Q 042825 568 RKVVDATHSDPEYIIHLATWFQKM-----HKNHDTFQMAIDKTIQLDEENLAN---VSTVAE 621 (631)
Q Consensus 568 ~~P~~~~~~~~~~~~~l~~~~~~~-----~~~~~~l~~~id~~L~~d~~~r~~---~~~vl~ 621 (631)
+.||......+ ....+..|.... ...++++.++|.+++. +|.+|+. +.++++
T Consensus 236 ~~Pf~~~~~~~-~~~~i~~~~~~~~~~~~~~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~ 295 (364)
T cd05599 236 YPPFCSDNPQE-TYRKIINWKETLQFPDEVPLSPEAKDLIKRLCC-EAERRLGNNGVNEIKS 295 (364)
T ss_pred CCCCCCCCHHH-HHHHHHcCCCccCCCCCCCCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhc
Confidence 99998654321 222233332211 1224678999999985 8999887 777664
|
Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica |
| >cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.8e-20 Score=188.92 Aligned_cols=196 Identities=20% Similarity=0.312 Sum_probs=141.9
Q ss_pred CCcccceeecCCCceEEEEEEecCCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc-------------------------
Q 042825 418 NNFSEENRLGRGGVGTVYKGELKDGTEVGVKRMELGSVTEQGIAQFESEITVLTK------------------------- 472 (631)
Q Consensus 418 ~~f~~~~~iG~G~fg~Vyk~~~~~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~------------------------- 472 (631)
++|+..+.||+|+||.||+++++++..+|+|.+...... ..+|..|++++.+
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~~~~---~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~ 80 (256)
T cd05114 4 SELTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEGAMS---EEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEF 80 (256)
T ss_pred HHcEEeeEecCCcCceEEEEEeccCceEEEEecccCCcc---HHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEEc
Confidence 357778999999999999999988889999988754332 3568889888876
Q ss_pred ---CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCCcc
Q 042825 473 ---GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENGKH 525 (631)
Q Consensus 473 ---gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~~~ 525 (631)
|+|.++++. ....++|.....++.+++.+ ..+||+|||+++..... ..
T Consensus 81 ~~~~~L~~~~~~----~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~-~~ 155 (256)
T cd05114 81 MENGCLLNYLRQ----RQGKLSKDMLLSMCQDVCEGMEYLERNSFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDD-EY 155 (256)
T ss_pred CCCCcHHHHHHh----CccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcceEEEcCCCeEEECCCCCccccCCC-ce
Confidence 556555532 12357888888888887765 34689999999865322 11
Q ss_pred ccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChHHHHHHHH-H-hHhhhcCChhHHHHH
Q 042825 526 SILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT-GRKVVDATHSDPEYIIHLAT-W-FQKMHKNHDTFQMAI 602 (631)
Q Consensus 526 ~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~Ellt-G~~P~~~~~~~~~~~~~l~~-~-~~~~~~~~~~l~~~i 602 (631)
.......++..|+|||++.+..++.++||||||+++|||++ |+.||....... ....+.. + .......+..+.+++
T Consensus 156 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~li 234 (256)
T cd05114 156 TSSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYE-VVEMISRGFRLYRPKLASMTVYEVM 234 (256)
T ss_pred eccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHHH-HHHHHHCCCCCCCCCCCCHHHHHHH
Confidence 12223346678999999988889999999999999999999 899997543221 1111111 1 001111245789999
Q ss_pred HhhcCCChhhHHhHHHHHHH
Q 042825 603 DKTIQLDEENLANVSTVAEL 622 (631)
Q Consensus 603 d~~L~~d~~~r~~~~~vl~l 622 (631)
.+|+..+|.+||++.++++.
T Consensus 235 ~~c~~~~p~~Rps~~~l~~~ 254 (256)
T cd05114 235 YSCWHEKPEGRPTFAELLRA 254 (256)
T ss_pred HHHccCCcccCcCHHHHHHh
Confidence 99999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h |
| >cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.84 E-value=2.7e-20 Score=188.76 Aligned_cols=200 Identities=20% Similarity=0.300 Sum_probs=144.5
Q ss_pred CCcccceeecCCCceEEEEEEecC----CcEEEEEEEecCCCCHHHHHHHHHHHHHHhc---------------------
Q 042825 418 NNFSEENRLGRGGVGTVYKGELKD----GTEVGVKRMELGSVTEQGIAQFESEITVLTK--------------------- 472 (631)
Q Consensus 418 ~~f~~~~~iG~G~fg~Vyk~~~~~----g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~--------------------- 472 (631)
++|+..+.||+|+||.||+|+++. ...||||+++... ......+|.+|+.++.+
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~i 82 (266)
T cd05033 4 SYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGS-SDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVMI 82 (266)
T ss_pred HHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCC-ChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceEE
Confidence 568888999999999999998752 4589999887543 34456778999888765
Q ss_pred -------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCC
Q 042825 473 -------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPE 521 (631)
Q Consensus 473 -------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~ 521 (631)
++|.+++.. ....+.+.....++.+++.| +.++|+|||+++....
T Consensus 83 v~e~~~~~~L~~~~~~----~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~ 158 (266)
T cd05033 83 ITEYMENGSLDKFLRE----NDGKFTVGQLVGMLRGIASGMKYLSEMNYVHRDLAARNILVNSNLVCKVSDFGLSRRLED 158 (266)
T ss_pred EEEcCCCCCHHHHHHh----ccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCCEEECccchhhcccc
Confidence 455555532 22367888888888887765 3478999999987742
Q ss_pred CCccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChHHHHHHHH-Hh-HhhhcCChhH
Q 042825 522 NGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT-GRKVVDATHSDPEYIIHLAT-WF-QKMHKNHDTF 598 (631)
Q Consensus 522 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~Ellt-G~~P~~~~~~~~~~~~~l~~-~~-~~~~~~~~~l 598 (631)
...........++..|+|||.+.+..++.++||||||+++|||++ |+.||....... ....+.. +. ......++.+
T Consensus 159 ~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l 237 (266)
T cd05033 159 SEATYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQD-VIKAVEDGYRLPPPMDCPSAL 237 (266)
T ss_pred cccceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCHHH-HHHHHHcCCCCCCCCCCCHHH
Confidence 111112223345678999999988889999999999999999998 999996543221 1111111 11 1111224689
Q ss_pred HHHHHhhcCCChhhHHhHHHHHHHH
Q 042825 599 QMAIDKTIQLDEENLANVSTVAELG 623 (631)
Q Consensus 599 ~~~id~~L~~d~~~r~~~~~vl~la 623 (631)
.+++.+|+..+|.+||++.++++..
T Consensus 238 ~~li~~cl~~~p~~Rp~~~ei~~~l 262 (266)
T cd05033 238 YQLMLDCWQKDRNERPTFSQIVSTL 262 (266)
T ss_pred HHHHHHHcCCCcccCcCHHHHHHHH
Confidence 9999999999999999999988754
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment |
| >cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B | Back alignment and domain information |
|---|
Probab=99.84 E-value=2.5e-20 Score=191.51 Aligned_cols=209 Identities=21% Similarity=0.260 Sum_probs=148.1
Q ss_pred CCcccceeecCCCceEEEEEEec------CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc-------------------
Q 042825 418 NNFSEENRLGRGGVGTVYKGELK------DGTEVGVKRMELGSVTEQGIAQFESEITVLTK------------------- 472 (631)
Q Consensus 418 ~~f~~~~~iG~G~fg~Vyk~~~~------~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~------------------- 472 (631)
++|...+.||+|+||.||++... ++..+|+|.+... .....+.+.+|++++.+
T Consensus 5 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 82 (288)
T cd05093 5 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDA--SDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPL 82 (288)
T ss_pred HHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCc--CHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCcc
Confidence 46788899999999999999742 3457899988653 23456779999998875
Q ss_pred ---------CChhHHhHhhhh--------cCCCCCCHHHHHHHHHHhhcC------------------------CCcEEE
Q 042825 473 ---------GTLGRHLFNWEE--------EGLEPLEWNTRLNIALDVARG------------------------DDMRVA 511 (631)
Q Consensus 473 ---------gsL~~~L~~~~~--------~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~ 511 (631)
++|.+++..... .....+++.....++.+++.+ +.+||+
T Consensus 83 ~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~i~H~dlkp~Nili~~~~~~kl~ 162 (288)
T cd05093 83 IMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKIG 162 (288)
T ss_pred EEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEccCCcEEec
Confidence 666666643211 112358888888888887765 457899
Q ss_pred eeccccccCCCCccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChHHHHHHHHHhHh
Q 042825 512 DFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT-GRKVVDATHSDPEYIIHLATWFQK 590 (631)
Q Consensus 512 DFGla~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~Ellt-G~~P~~~~~~~~~~~~~l~~~~~~ 590 (631)
|||+++...............++..|+|||++.+..++.++|||||||++|||+| |+.||...................
T Consensus 163 dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~~~~~~i~~~~~~~ 242 (288)
T cd05093 163 DFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQGRVLQ 242 (288)
T ss_pred cCCccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCcCC
Confidence 9999987643222222233456789999999988889999999999999999999 999997653321111111111111
Q ss_pred -hhcCChhHHHHHHhhcCCChhhHHhHHHHHHHHHhhhc
Q 042825 591 -MHKNHDTFQMAIDKTIQLDEENLANVSTVAELGDHCCA 628 (631)
Q Consensus 591 -~~~~~~~l~~~id~~L~~d~~~r~~~~~vl~lal~C~~ 628 (631)
....+.++.+++.+|+..+|.+|+++.++.+..-...+
T Consensus 243 ~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~~~ 281 (288)
T cd05093 243 RPRTCPKEVYDLMLGCWQREPHMRLNIKEIHSLLQNLAK 281 (288)
T ss_pred CCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHH
Confidence 11234689999999999999999999998876554443
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly |
| >cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3 | Back alignment and domain information |
|---|
Probab=99.84 E-value=2.6e-20 Score=190.45 Aligned_cols=202 Identities=22% Similarity=0.317 Sum_probs=143.3
Q ss_pred CCcccceeecCCCceEEEEEEec-CCc----EEEEEEEecCCCCHHHHHHHHHHHHHHhc--------------------
Q 042825 418 NNFSEENRLGRGGVGTVYKGELK-DGT----EVGVKRMELGSVTEQGIAQFESEITVLTK-------------------- 472 (631)
Q Consensus 418 ~~f~~~~~iG~G~fg~Vyk~~~~-~g~----~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~-------------------- 472 (631)
++|+..+.||+|+||+||+|.+. +++ .+++|++.... ......++..|+..+.+
T Consensus 7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~~~~~~~ 85 (279)
T cd05111 7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRS-GRQTFQEITDHMLAMGSLDHAYIVRLLGICPGASLQL 85 (279)
T ss_pred hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeeccccc-chHHHHHHHHHHHHHhcCCCCCcceEEEEECCCccEE
Confidence 36777899999999999999864 344 47788775332 23344667777776654
Q ss_pred -------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCC
Q 042825 473 -------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPE 521 (631)
Q Consensus 473 -------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~ 521 (631)
|+|.+++.. ....++|.....++.+++.| ..+||+|||+++....
T Consensus 86 i~e~~~~gsL~~~l~~----~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~kl~Dfg~~~~~~~ 161 (279)
T cd05111 86 VTQLSPLGSLLDHVRQ----HRDSLDPQRLLNWCVQIAKGMYYLEEHRMVHRNLAARNILLKSDSIVQIADFGVADLLYP 161 (279)
T ss_pred EEEeCCCCcHHHHHHh----cccCCCHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCCCcEEEcCCccceeccC
Confidence 566666542 23468888889999888876 3578999999987643
Q ss_pred CCccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChHHHHHHHHHhHhhh---cCChh
Q 042825 522 NGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT-GRKVVDATHSDPEYIIHLATWFQKMH---KNHDT 597 (631)
Q Consensus 522 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~Ellt-G~~P~~~~~~~~~~~~~l~~~~~~~~---~~~~~ 597 (631)
...........++..|+|||++.+..++.++|||||||++|||+| |+.||.+.... ....+..--.... ....+
T Consensus 162 ~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 239 (279)
T cd05111 162 DDKKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPH--EVPDLLEKGERLAQPQICTID 239 (279)
T ss_pred CCcccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHH--HHHHHHHCCCcCCCCCCCCHH
Confidence 322222344567889999999988899999999999999999998 99999764322 1111111000000 11246
Q ss_pred HHHHHHhhcCCChhhHHhHHHHHHHHHhh
Q 042825 598 FQMAIDKTIQLDEENLANVSTVAELGDHC 626 (631)
Q Consensus 598 l~~~id~~L~~d~~~r~~~~~vl~lal~C 626 (631)
+.+++.+|+..+|+.||++.++++.....
T Consensus 240 ~~~li~~c~~~~p~~Rps~~el~~~l~~~ 268 (279)
T cd05111 240 VYMVMVKCWMIDENVRPTFKELANEFTRM 268 (279)
T ss_pred HHHHHHHHcCCCcccCcCHHHHHHHHHHH
Confidence 78899999999999999999998865543
|
Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r |
| >cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.1e-20 Score=196.82 Aligned_cols=186 Identities=23% Similarity=0.316 Sum_probs=129.4
Q ss_pred eeecCCCceEEEEEEec-CCcEEEEEEEecCCC-CHHHHHHHHHHHHHHhc-----------------------------
Q 042825 424 NRLGRGGVGTVYKGELK-DGTEVGVKRMELGSV-TEQGIAQFESEITVLTK----------------------------- 472 (631)
Q Consensus 424 ~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~-~~~~~~~~~~Ei~~l~~----------------------------- 472 (631)
++||+|+||.||+|+.+ +|+.||||.++.... .....+.+..|..++..
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~ 80 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence 47999999999999976 588999999975421 11233455666666542
Q ss_pred CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCCccccc
Q 042825 473 GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENGKHSIL 528 (631)
Q Consensus 473 gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~~~~~~ 528 (631)
|+|..++.. ...+++.....++.+++.| +.+||+|||+++..... ....
T Consensus 81 g~L~~~i~~-----~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~--~~~~ 153 (316)
T cd05620 81 GDLMFHIQD-----KGRFDLYRATFYAAEIVCGLQFLHSKGIIYRDLKLDNVMLDRDGHIKIADFGMCKENVFG--DNRA 153 (316)
T ss_pred CcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEeCccCCCeecccC--CCce
Confidence 455444421 2346676766777777665 45789999998753211 1223
Q ss_pred cccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHhHhh-hcCChhHHHHHHhhcC
Q 042825 529 TKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQKM-HKNHDTFQMAIDKTIQ 607 (631)
Q Consensus 529 ~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~~~~-~~~~~~l~~~id~~L~ 607 (631)
....||..|+|||++.+..++.++||||+||++|||++|+.||....... ....+....... ...+.++.+++.++|.
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~li~~~l~ 232 (316)
T cd05620 154 STFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDE-LFESIRVDTPHYPRWITKESKDILEKLFE 232 (316)
T ss_pred eccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHH-HHHHHHhCCCCCCCCCCHHHHHHHHHHcc
Confidence 45679999999999998899999999999999999999999997543221 111111111100 1124678999999999
Q ss_pred CChhhHHhHH
Q 042825 608 LDEENLANVS 617 (631)
Q Consensus 608 ~d~~~r~~~~ 617 (631)
.||.+|+++.
T Consensus 233 ~dP~~R~~~~ 242 (316)
T cd05620 233 RDPTRRLGVV 242 (316)
T ss_pred CCHHHcCCCh
Confidence 9999999874
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I |
| >PTZ00267 NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=2.7e-20 Score=204.83 Aligned_cols=200 Identities=18% Similarity=0.210 Sum_probs=144.0
Q ss_pred CcccceeecCCCceEEEEEEec-C-CcEEEEEEEecCCCCHHHHHHHHHHHHHHhc------------------------
Q 042825 419 NFSEENRLGRGGVGTVYKGELK-D-GTEVGVKRMELGSVTEQGIAQFESEITVLTK------------------------ 472 (631)
Q Consensus 419 ~f~~~~~iG~G~fg~Vyk~~~~-~-g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~------------------------ 472 (631)
.|...+.||+|+||.||+|... + +..||+|.+... .......+.+|++++.+
T Consensus 68 ~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~--~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~E 145 (478)
T PTZ00267 68 MYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLN--DERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIME 145 (478)
T ss_pred eEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccC--CHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEEE
Confidence 3888999999999999999854 3 678888877543 23344567889988875
Q ss_pred ----CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCCc
Q 042825 473 ----GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENGK 524 (631)
Q Consensus 473 ----gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~~ 524 (631)
|+|.+++..... ....+++.....++.+++.| +.+||+|||+++.......
T Consensus 146 ~~~gg~L~~~l~~~~~-~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~~~ 224 (478)
T PTZ00267 146 YGSGGDLNKQIKQRLK-EHLPFQEYEVGLLFYQIVLALDEVHSRKMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSVS 224 (478)
T ss_pred CCCCCCHHHHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHhCCEEECCcCHHhEEECCCCcEEEEeCcCceecCCccc
Confidence 778777754322 23457777777777776655 4578999999987642222
Q ss_pred cccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHhH-hhhcCChhHHHHHH
Q 042825 525 HSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQ-KMHKNHDTFQMAID 603 (631)
Q Consensus 525 ~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~~-~~~~~~~~l~~~id 603 (631)
.......+||++|+|||++.+..++.++|||||||++|||++|+.||......+.....+..-.. .....+.++.+++.
T Consensus 225 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~ 304 (478)
T PTZ00267 225 LDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQREIMQQVLYGKYDPFPCPVSSGMKALLD 304 (478)
T ss_pred cccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCccCCHHHHHHHH
Confidence 22234567999999999999889999999999999999999999999754322111111110000 01123467999999
Q ss_pred hhcCCChhhHHhHHHHHH
Q 042825 604 KTIQLDEENLANVSTVAE 621 (631)
Q Consensus 604 ~~L~~d~~~r~~~~~vl~ 621 (631)
+++..+|+.|+++.+++.
T Consensus 305 ~~L~~dP~~Rps~~~~l~ 322 (478)
T PTZ00267 305 PLLSKNPALRPTTQQLLH 322 (478)
T ss_pred HHhccChhhCcCHHHHHh
Confidence 999999999999988764
|
|
| >cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.84 E-value=4e-20 Score=194.99 Aligned_cols=199 Identities=19% Similarity=0.251 Sum_probs=139.1
Q ss_pred hhcCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhcCC---hhHHh-----------
Q 042825 415 NATNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTKGT---LGRHL----------- 479 (631)
Q Consensus 415 ~~t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~gs---L~~~L----------- 479 (631)
...++|...+.||+|+||.||+|+.. +++.||||++..........+++.+|++++.+-. +-..+
T Consensus 12 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 91 (343)
T cd07878 12 EVPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIEN 91 (343)
T ss_pred hhhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccccccc
Confidence 45678999999999999999999864 6889999998754333334566778988887611 11110
Q ss_pred ---------------HhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccC
Q 042825 480 ---------------FNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVP 520 (631)
Q Consensus 480 ---------------~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~ 520 (631)
..+. ....+++.....++.+++.| +.+||+|||+++...
T Consensus 92 ~~~~~~~~~~~~~~l~~~~--~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~ 169 (343)
T cd07878 92 FNEVYLVTNLMGADLNNIV--KCQKLSDEHVQFLIYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDCELRILDFGLARQAD 169 (343)
T ss_pred cCcEEEEeecCCCCHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCCeecccCChhhEEECCCCCEEEcCCccceecC
Confidence 0000 11347777777888887765 467899999998763
Q ss_pred CCCccccccccccCccccccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHH-------------
Q 042825 521 ENGKHSILTKVAGTFGYLAPEYIVT-GRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLAT------------- 586 (631)
Q Consensus 521 ~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~------------- 586 (631)
. ......||..|+|||++.+ ..++.++||||+||++|||++|+.||.+..... ....+..
T Consensus 170 ~-----~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 243 (343)
T cd07878 170 D-----EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYID-QLKRIMEVVGTPSPEVLKKI 243 (343)
T ss_pred C-----CcCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHH-HHHHHHHHhCCCCHHHHHhc
Confidence 2 1234578999999999876 468999999999999999999999997543211 0001100
Q ss_pred -------HhHh------------hhcCChhHHHHHHhhcCCChhhHHhHHHHHH
Q 042825 587 -------WFQK------------MHKNHDTFQMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 587 -------~~~~------------~~~~~~~l~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
+... .....+.+.+++.+||..||.+|+++.++++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~ 297 (343)
T cd07878 244 SSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALA 297 (343)
T ss_pred chhhHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 0000 0011235689999999999999999998875
|
Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is |
| >cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk | Back alignment and domain information |
|---|
Probab=99.84 E-value=3.1e-20 Score=187.65 Aligned_cols=198 Identities=24% Similarity=0.362 Sum_probs=144.5
Q ss_pred cCCcccceeecCCCceEEEEEEecCCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc------------------------
Q 042825 417 TNNFSEENRLGRGGVGTVYKGELKDGTEVGVKRMELGSVTEQGIAQFESEITVLTK------------------------ 472 (631)
Q Consensus 417 t~~f~~~~~iG~G~fg~Vyk~~~~~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~------------------------ 472 (631)
.++|+..++||+|+||.||+|..++++.||+|++..... ...+|.+|++++.+
T Consensus 5 ~~~~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~~---~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~v~e~ 81 (260)
T cd05067 5 RETLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGSM---SPEAFLAEANLMKQLQHPRLVRLYAVVTQEPIYIITEY 81 (260)
T ss_pred hHHceeeeeeccCccceEEeeecCCCceEEEEEecCCCC---cHHHHHHHHHHHHhcCCcCeeeEEEEEccCCcEEEEEc
Confidence 356888899999999999999988899999999876543 23578889888875
Q ss_pred ---CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCCcc
Q 042825 473 ---GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENGKH 525 (631)
Q Consensus 473 ---gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~~~ 525 (631)
++|.+++.. .....+++.+...++.+++.+ ..++|+|||+++...... .
T Consensus 82 ~~~~~L~~~~~~---~~~~~~~~~~~~~i~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~-~ 157 (260)
T cd05067 82 MENGSLVDFLKT---PEGIKLTINKLIDMAAQIAEGMAFIERKNYIHRDLRAANILVSETLCCKIADFGLARLIEDNE-Y 157 (260)
T ss_pred CCCCCHHHHHHh---cCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHHhEEEcCCCCEEEccCcceeecCCCC-c
Confidence 455555532 223467888888888777765 457899999998764211 1
Q ss_pred ccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChHHHHHHHHHhH--hhhcCChhHHHHH
Q 042825 526 SILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT-GRKVVDATHSDPEYIIHLATWFQ--KMHKNHDTFQMAI 602 (631)
Q Consensus 526 ~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~Ellt-G~~P~~~~~~~~~~~~~l~~~~~--~~~~~~~~l~~~i 602 (631)
.......++..|+|||++....++.++|||||||++|||++ |+.||.+..... ....+..-.. .....+.++.+++
T Consensus 158 ~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~li 236 (260)
T cd05067 158 TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPE-VIQNLERGYRMPRPDNCPEELYELM 236 (260)
T ss_pred ccccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChHH-HHHHHHcCCCCCCCCCCCHHHHHHH
Confidence 12223456788999999988889999999999999999999 999997543221 1111111100 0111235799999
Q ss_pred HhhcCCChhhHHhHHHHHHH
Q 042825 603 DKTIQLDEENLANVSTVAEL 622 (631)
Q Consensus 603 d~~L~~d~~~r~~~~~vl~l 622 (631)
.+|+..+|++||++.++.++
T Consensus 237 ~~~l~~~p~~Rp~~~~l~~~ 256 (260)
T cd05067 237 RLCWKEKPEERPTFEYLRSV 256 (260)
T ss_pred HHHccCChhhCCCHHHHHHH
Confidence 99999999999999988764
|
Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr |
| >cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Probab=99.84 E-value=3.2e-21 Score=201.18 Aligned_cols=186 Identities=18% Similarity=0.241 Sum_probs=133.2
Q ss_pred eeecCCCceEEEEEEe----cCCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc---------------------------
Q 042825 424 NRLGRGGVGTVYKGEL----KDGTEVGVKRMELGSVTEQGIAQFESEITVLTK--------------------------- 472 (631)
Q Consensus 424 ~~iG~G~fg~Vyk~~~----~~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~--------------------------- 472 (631)
+.||+|+||.||+++. .+|+.||+|++............+..|++++.+
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 81 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFLR 81 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCCC
Confidence 5799999999999874 258899999997644333345567788888765
Q ss_pred -CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCCcccc
Q 042825 473 -GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENGKHSI 527 (631)
Q Consensus 473 -gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~~~~~ 527 (631)
|+|.+++.. ...+++.....++.+++.| +.+||+|||+++..... ...
T Consensus 82 ~~~L~~~l~~-----~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~--~~~ 154 (318)
T cd05582 82 GGDLFTRLSK-----EVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDH--EKK 154 (318)
T ss_pred CCcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHeEECCCCcEEEeeccCCcccCCC--CCc
Confidence 445444421 2357788888888777765 46789999999865322 122
Q ss_pred ccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHhHhhhcCChhHHHHHHhhcC
Q 042825 528 LTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQKMHKNHDTFQMAIDKTIQ 607 (631)
Q Consensus 528 ~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~id~~L~ 607 (631)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||.......................+.++.+++.++|.
T Consensus 155 ~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~i~~~~~~~p~~~~~~~~~li~~~l~ 234 (318)
T cd05582 155 AYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKETMTMILKAKLGMPQFLSPEAQSLLRALFK 234 (318)
T ss_pred eecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhh
Confidence 34567999999999998888999999999999999999999999854322111111110011111224678999999999
Q ss_pred CChhhHHhH
Q 042825 608 LDEENLANV 616 (631)
Q Consensus 608 ~d~~~r~~~ 616 (631)
.||.+|+++
T Consensus 235 ~~P~~R~~a 243 (318)
T cd05582 235 RNPANRLGA 243 (318)
T ss_pred cCHhHcCCC
Confidence 999999984
|
Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate |
| >cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.84 E-value=3.9e-20 Score=187.91 Aligned_cols=202 Identities=23% Similarity=0.284 Sum_probs=141.7
Q ss_pred cccceeecCCCceEEEEEEecC----CcEEEEEEEecCCCCHHHHHHHHHHHHHHhc-----------------------
Q 042825 420 FSEENRLGRGGVGTVYKGELKD----GTEVGVKRMELGSVTEQGIAQFESEITVLTK----------------------- 472 (631)
Q Consensus 420 f~~~~~iG~G~fg~Vyk~~~~~----g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~----------------------- 472 (631)
|...+.||+|+||.||+|.... +..||||+++...........+.+|++.+.+
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 80 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIP 80 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCc
Confidence 4567899999999999998642 3689999998655555566788999888765
Q ss_pred -----------CChhHHhHhhh-hcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccc
Q 042825 473 -----------GTLGRHLFNWE-EEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLV 516 (631)
Q Consensus 473 -----------gsL~~~L~~~~-~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla 516 (631)
|++..++.... ......+++.....++.+++.| ..+||+|||++
T Consensus 81 ~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~ 160 (273)
T cd05035 81 KPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRNFIHRDLAARNCMLREDMTVCVADFGLS 160 (273)
T ss_pred ccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchheEEECCCCeEEECCccce
Confidence 23343432211 1122457888888888887765 35789999999
Q ss_pred cccCCCCccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChHHHHHHHHH--hHhhhc
Q 042825 517 RLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT-GRKVVDATHSDPEYIIHLATW--FQKMHK 593 (631)
Q Consensus 517 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~Ellt-G~~P~~~~~~~~~~~~~l~~~--~~~~~~ 593 (631)
+...............++..|+|||++....++.++|||||||++|||++ |..||.+....+ ....+... ......
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~ 239 (273)
T cd05035 161 KKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENHE-IYDYLRHGNRLKQPED 239 (273)
T ss_pred eeccccccccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHH-HHHHHHcCCCCCCCcC
Confidence 87643222111222345678999999988889999999999999999999 889987543321 11111111 011112
Q ss_pred CChhHHHHHHhhcCCChhhHHhHHHHHHH
Q 042825 594 NHDTFQMAIDKTIQLDEENLANVSTVAEL 622 (631)
Q Consensus 594 ~~~~l~~~id~~L~~d~~~r~~~~~vl~l 622 (631)
...++.+++.+|+..||.+|+++.++++.
T Consensus 240 ~~~~~~~li~~~l~~~p~~Rp~~~e~~~~ 268 (273)
T cd05035 240 CLDELYDLMYSCWRADPKDRPTFTKLREV 268 (273)
T ss_pred CCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 34688999999999999999999998765
|
Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu |
| >cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.84 E-value=3.2e-20 Score=189.05 Aligned_cols=195 Identities=22% Similarity=0.300 Sum_probs=142.4
Q ss_pred CCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc------------------------
Q 042825 418 NNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK------------------------ 472 (631)
Q Consensus 418 ~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~------------------------ 472 (631)
++|+..+.||.|+||.||+|+.. +++.||+|.+.... .......+.+|++++++
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 79 (274)
T cd06609 1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEE-AEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIME 79 (274)
T ss_pred ChhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccc-cchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEE
Confidence 36778899999999999999966 58899999987543 23345678889888765
Q ss_pred ----CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCCc
Q 042825 473 ----GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENGK 524 (631)
Q Consensus 473 ----gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~~ 524 (631)
++|.+++.. ..+++.....++.+++.+ +.++|+|||+++.+....
T Consensus 80 ~~~~~~L~~~~~~------~~~~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~- 152 (274)
T cd06609 80 YCGGGSCLDLLKP------GKLDETYIAFILREVLLGLEYLHEEGKIHRDIKAANILLSEEGDVKLADFGVSGQLTSTM- 152 (274)
T ss_pred eeCCCcHHHHHhh------cCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEcccccceeecccc-
Confidence 344444431 267888888887777764 457899999998774221
Q ss_pred cccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHhHhhhc--CChhHHHHH
Q 042825 525 HSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQKMHK--NHDTFQMAI 602 (631)
Q Consensus 525 ~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~~~~~~--~~~~l~~~i 602 (631)
.......|+..|+|||++.+..++.++|||||||++|||+||+.||...............+...... .+.++.+++
T Consensus 153 -~~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 231 (274)
T cd06609 153 -SKRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPMRVLFLIPKNNPPSLEGNKFSKPFKDFV 231 (274)
T ss_pred -cccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchHHHHHHhhhcCCCCCcccccCHHHHHHH
Confidence 12334578899999999998889999999999999999999999997543221111111111111111 245789999
Q ss_pred HhhcCCChhhHHhHHHHHH
Q 042825 603 DKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 603 d~~L~~d~~~r~~~~~vl~ 621 (631)
.+++..+|++|+++.++++
T Consensus 232 ~~~l~~~p~~Rpt~~~il~ 250 (274)
T cd06609 232 SLCLNKDPKERPSAKELLK 250 (274)
T ss_pred HHHhhCChhhCcCHHHHhh
Confidence 9999999999999998865
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) |
| >PLN00034 mitogen-activated protein kinase kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=2.4e-20 Score=197.57 Aligned_cols=199 Identities=20% Similarity=0.275 Sum_probs=133.6
Q ss_pred CcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhcCChhHH---------------hHhh
Q 042825 419 NFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTKGTLGRH---------------LFNW 482 (631)
Q Consensus 419 ~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~gsL~~~---------------L~~~ 482 (631)
+|+..+.||+|+||+||+|+.. +++.||||++.... .....+.+.+|++++.+-..... +.++
T Consensus 75 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 153 (353)
T PLN00034 75 ELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNH-EDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLLEF 153 (353)
T ss_pred HHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCC-cHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEEEec
Confidence 4456689999999999999965 58999999986543 33455778999999876211100 1111
Q ss_pred hhc----CCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCCccccccccccC
Q 042825 483 EEE----GLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENGKHSILTKVAGT 534 (631)
Q Consensus 483 ~~~----~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~~~~~~~~~~gt 534 (631)
... ............++.+++.| +.+||+|||+++.+... ........||
T Consensus 154 ~~~~~L~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~--~~~~~~~~gt 231 (353)
T PLN00034 154 MDGGSLEGTHIADEQFLADVARQILSGIAYLHRRHIVHRDIKPSNLLINSAKNVKIADFGVSRILAQT--MDPCNSSVGT 231 (353)
T ss_pred CCCCcccccccCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCEEEcccccceecccc--cccccccccC
Confidence 111 01123445555666666655 45789999999876422 1123446799
Q ss_pred ccccccccccc-----CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHhH------hhhcCChhHHHHHH
Q 042825 535 FGYLAPEYIVT-----GRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQ------KMHKNHDTFQMAID 603 (631)
Q Consensus 535 ~~Y~aPE~~~~-----~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~~------~~~~~~~~l~~~id 603 (631)
..|+|||++.. ...+.++|||||||++|||++|+.||....... ...+..... .....+.++.++|.
T Consensus 232 ~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 309 (353)
T PLN00034 232 IAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGD--WASLMCAICMSQPPEAPATASREFRHFIS 309 (353)
T ss_pred ccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcc--HHHHHHHHhccCCCCCCCccCHHHHHHHH
Confidence 99999998743 224568999999999999999999997432221 111111110 01122467999999
Q ss_pred hhcCCChhhHHhHHHHHHH
Q 042825 604 KTIQLDEENLANVSTVAEL 622 (631)
Q Consensus 604 ~~L~~d~~~r~~~~~vl~l 622 (631)
+||..||++|+++.++++.
T Consensus 310 ~~l~~~P~~Rpt~~ell~h 328 (353)
T PLN00034 310 CCLQREPAKRWSAMQLLQH 328 (353)
T ss_pred HHccCChhhCcCHHHHhcC
Confidence 9999999999999998763
|
|
| >PTZ00266 NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=3e-20 Score=212.27 Aligned_cols=203 Identities=18% Similarity=0.294 Sum_probs=145.0
Q ss_pred hhcCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc---------------------
Q 042825 415 NATNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK--------------------- 472 (631)
Q Consensus 415 ~~t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~--------------------- 472 (631)
...++|...+.||+|+||+||+++.. .+..||+|.+............|..|+.++.+
T Consensus 10 ~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~l 89 (1021)
T PTZ00266 10 SRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQKL 89 (1021)
T ss_pred cccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCEE
Confidence 45678999999999999999999976 47899999998665555667789999998876
Q ss_pred ---------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC--------------------------------------
Q 042825 473 ---------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG-------------------------------------- 505 (631)
Q Consensus 473 ---------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g-------------------------------------- 505 (631)
|+|.+++..... ....+++.....|+.+++.|
T Consensus 90 yIVMEY~~gGSL~~lL~k~~~-~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i 168 (1021)
T PTZ00266 90 YILMEFCDAGDLSRNIQKCYK-MFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKI 168 (1021)
T ss_pred EEEEeCCCCCcHHHHHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCccccccc
Confidence 566666643211 12346666666665554433
Q ss_pred ----------CCcEEEeeccccccCCCCccccccccccCccccccccccc--CCCCchhhHHHHHHHHHHHHcCCCCCCC
Q 042825 506 ----------DDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVT--GRITAKVDVYSFGMILMDLITGRKVVDA 573 (631)
Q Consensus 506 ----------~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~--~~~~~k~DVwS~GvvL~ElltG~~P~~~ 573 (631)
..+||+|||+++.+... .......||+.|+|||++.+ ..++.++|||||||+||||+||+.||..
T Consensus 169 ~~~~~n~ng~~iVKLsDFGlAr~l~~~---s~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~ 245 (1021)
T PTZ00266 169 TAQANNLNGRPIAKIGDFGLSKNIGIE---SMAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHK 245 (1021)
T ss_pred cccccccCCCCceEEccCCcccccccc---ccccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCc
Confidence 01689999999876322 12334579999999999864 4589999999999999999999999975
Q ss_pred CCCChHHHHHHHHHhHh-hhcCChhHHHHHHhhcCCChhhHHhHHHHHH
Q 042825 574 THSDPEYIIHLATWFQK-MHKNHDTFQMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 574 ~~~~~~~~~~l~~~~~~-~~~~~~~l~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
..........+...... ....+.++.++|..+|..+|.+||++.+++.
T Consensus 246 ~~~~~qli~~lk~~p~lpi~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~ 294 (1021)
T PTZ00266 246 ANNFSQLISELKRGPDLPIKGKSKELNILIKNLLNLSAKERPSALQCLG 294 (1021)
T ss_pred CCcHHHHHHHHhcCCCCCcCCCCHHHHHHHHHHhcCChhHCcCHHHHhc
Confidence 43221111111111100 1112467999999999999999999999874
|
|
| >cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk | Back alignment and domain information |
|---|
Probab=99.84 E-value=2.9e-20 Score=187.83 Aligned_cols=197 Identities=25% Similarity=0.383 Sum_probs=142.7
Q ss_pred CCcccceeecCCCceEEEEEEecCCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc-------------------------
Q 042825 418 NNFSEENRLGRGGVGTVYKGELKDGTEVGVKRMELGSVTEQGIAQFESEITVLTK------------------------- 472 (631)
Q Consensus 418 ~~f~~~~~iG~G~fg~Vyk~~~~~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~------------------------- 472 (631)
++|+..+.||+|+||.||+|..+++..+|+|.+...... .++|.+|+.++.+
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~~---~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~lv~e~~ 82 (260)
T cd05070 6 ESLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTMS---PESFLEEAQIMKKLRHDKLVQLYAVVSEEPIYIVTEYM 82 (260)
T ss_pred HHhhhhheeccccCceEEEEEecCCceeEEEEecCCCCC---HHHHHHHHHHHHhcCCCceEEEEeEECCCCcEEEEEec
Confidence 467788999999999999999888889999998765432 3568899988876
Q ss_pred --CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCCccc
Q 042825 473 --GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENGKHS 526 (631)
Q Consensus 473 --gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~~~~ 526 (631)
++|.++++. .....+++.++..++.+++.+ ..++|+|||+++.+..... .
T Consensus 83 ~~~~L~~~~~~---~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~~-~ 158 (260)
T cd05070 83 SKGSLLDFLKD---GEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILVGDGLVCKIADFGLARLIEDNEY-T 158 (260)
T ss_pred CCCcHHHHHHh---cCCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEEeCCceEEeCCceeeeeccCccc-c
Confidence 455555532 223457888888888887765 3468999999987642211 1
Q ss_pred cccccccCcccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChHHHHHHHHHhHh--hhcCChhHHHHHH
Q 042825 527 ILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT-GRKVVDATHSDPEYIIHLATWFQK--MHKNHDTFQMAID 603 (631)
Q Consensus 527 ~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~Ellt-G~~P~~~~~~~~~~~~~l~~~~~~--~~~~~~~l~~~id 603 (631)
......++..|+|||+..+..++.++|||||||++|||++ |+.||.+....+ ....+..-... ....+..+.+++.
T Consensus 159 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~li~ 237 (260)
T cd05070 159 ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNRE-VLEQVERGYRMPCPQDCPISLHELML 237 (260)
T ss_pred cccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHHH-HHHHHHcCCCCCCCCcCCHHHHHHHH
Confidence 1223346678999999988889999999999999999999 899997543221 11111110000 1112467899999
Q ss_pred hhcCCChhhHHhHHHHHHH
Q 042825 604 KTIQLDEENLANVSTVAEL 622 (631)
Q Consensus 604 ~~L~~d~~~r~~~~~vl~l 622 (631)
+++..+|.+||++.++.+.
T Consensus 238 ~~l~~~p~~Rpt~~~l~~~ 256 (260)
T cd05070 238 QCWKKDPEERPTFEYLQSF 256 (260)
T ss_pred HHcccCcccCcCHHHHHHH
Confidence 9999999999999988754
|
Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r |
| >cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.7e-20 Score=196.59 Aligned_cols=185 Identities=18% Similarity=0.242 Sum_probs=130.2
Q ss_pred eeecCCCceEEEEEEec-CCcEEEEEEEecCCCC-HHHHHHHHHHHHHHhc-----------------------------
Q 042825 424 NRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVT-EQGIAQFESEITVLTK----------------------------- 472 (631)
Q Consensus 424 ~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~-~~~~~~~~~Ei~~l~~----------------------------- 472 (631)
++||+|+||.||+++.. +++.||||+++..... ......+.+|+.++.+
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSG 80 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence 46999999999999976 5889999999864322 2334567788877644
Q ss_pred CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCCccccc
Q 042825 473 GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENGKHSIL 528 (631)
Q Consensus 473 gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~~~~~~ 528 (631)
|+|..++.. ...+.+.....++.+++.| +.+||+|||+++...... ...
T Consensus 81 g~L~~~~~~-----~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~--~~~ 153 (329)
T cd05588 81 GDLMFHMQR-----QRKLPEEHARFYSAEISLALNFLHERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRPG--DTT 153 (329)
T ss_pred CCHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEECcCccccccccCC--Ccc
Confidence 445444421 2357888888888777765 457899999997532111 123
Q ss_pred cccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCh----HHHHHHHHH-----hHhhhcCChhHH
Q 042825 529 TKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDP----EYIIHLATW-----FQKMHKNHDTFQ 599 (631)
Q Consensus 529 ~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~----~~~~~l~~~-----~~~~~~~~~~l~ 599 (631)
....||..|+|||++.+..++.++|||||||++|||++|+.||+...... .....+... .+.....+.++.
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 233 (329)
T cd05588 154 STFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEKQIRIPRSLSVKAS 233 (329)
T ss_pred ccccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHcCCCCCCCCCCHHHH
Confidence 45679999999999999899999999999999999999999997321111 000011110 011112346789
Q ss_pred HHHHhhcCCChhhHHh
Q 042825 600 MAIDKTIQLDEENLAN 615 (631)
Q Consensus 600 ~~id~~L~~d~~~r~~ 615 (631)
+++.++|..||.+|++
T Consensus 234 ~li~~~L~~dP~~R~~ 249 (329)
T cd05588 234 SVLKGFLNKDPKERLG 249 (329)
T ss_pred HHHHHHhccCHHHcCC
Confidence 9999999999999986
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl |
| >cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase | Back alignment and domain information |
|---|
Probab=99.84 E-value=9.3e-21 Score=201.83 Aligned_cols=199 Identities=18% Similarity=0.174 Sum_probs=137.2
Q ss_pred hhcCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCC-CHHHHHHHHHHHHHHhc--------------------
Q 042825 415 NATNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSV-TEQGIAQFESEITVLTK-------------------- 472 (631)
Q Consensus 415 ~~t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~-~~~~~~~~~~Ei~~l~~-------------------- 472 (631)
...++|+..+.||+|+||.||+++.. +++.||+|++..... .....+.+..|+.++..
T Consensus 40 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~ 119 (370)
T cd05596 40 MKAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLY 119 (370)
T ss_pred CCHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEE
Confidence 34568899999999999999999976 588999999975322 12234557788888765
Q ss_pred --------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccC
Q 042825 473 --------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVP 520 (631)
Q Consensus 473 --------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~ 520 (631)
|+|.+++.. ..+.......++.+++.| +.+||+|||+++...
T Consensus 120 lv~Ey~~gg~L~~~l~~------~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~ 193 (370)
T cd05596 120 MVMEYMPGGDLVNLMSN------YDIPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMD 193 (370)
T ss_pred EEEcCCCCCcHHHHHHh------cCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEcCCCCEEEEeccceeecc
Confidence 556555532 124444444555555544 568899999998764
Q ss_pred CCCccccccccccCcccccccccccC----CCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHh-----Hhh
Q 042825 521 ENGKHSILTKVAGTFGYLAPEYIVTG----RITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWF-----QKM 591 (631)
Q Consensus 521 ~~~~~~~~~~~~gt~~Y~aPE~~~~~----~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~-----~~~ 591 (631)
... ........||+.|+|||++.+. .++.++|||||||++|||++|+.||....... ....+.... ...
T Consensus 194 ~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~-~~~~i~~~~~~~~~~~~ 271 (370)
T cd05596 194 ANG-MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVG-TYSKIMDHKNSLTFPDD 271 (370)
T ss_pred CCC-cccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHHH-HHHHHHcCCCcCCCCCc
Confidence 221 1122346799999999998653 37899999999999999999999998654321 111221100 011
Q ss_pred hcCChhHHHHHHhhcCCChhh--HHhHHHHHH
Q 042825 592 HKNHDTFQMAIDKTIQLDEEN--LANVSTVAE 621 (631)
Q Consensus 592 ~~~~~~l~~~id~~L~~d~~~--r~~~~~vl~ 621 (631)
...+.++.+++..+|..+|.. |+++.++++
T Consensus 272 ~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~ 303 (370)
T cd05596 272 IEISKQAKDLICAFLTDREVRLGRNGVDEIKS 303 (370)
T ss_pred CCCCHHHHHHHHHHccChhhccCCCCHHHHhc
Confidence 123578899999999877776 888888764
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in |
| >KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.84 E-value=2.1e-21 Score=196.69 Aligned_cols=192 Identities=23% Similarity=0.343 Sum_probs=137.5
Q ss_pred cCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCH-HHHHHHHHHHHHHhc----------------------
Q 042825 417 TNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTE-QGIAQFESEITVLTK---------------------- 472 (631)
Q Consensus 417 t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~-~~~~~~~~Ei~~l~~---------------------- 472 (631)
.+.|...++||+|+||.||-++.+ +|+.+|.|++.+..+.. ++..-.+.|-.++.+
T Consensus 184 ~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~LClV 263 (591)
T KOG0986|consen 184 KNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDALCLV 263 (591)
T ss_pred ccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCceEEE
Confidence 457888899999999999999976 59999999987654322 223335666666655
Q ss_pred ------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCC
Q 042825 473 ------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPEN 522 (631)
Q Consensus 473 ------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~ 522 (631)
|+|.-|++.. +...++..+..-.|.+|+-| ++++|+|.|+|..+...
T Consensus 264 LtlMNGGDLkfHiyn~---g~~gF~e~ra~FYAAEi~cGLehlH~~~iVYRDLKPeNILLDd~GhvRISDLGLAvei~~g 340 (591)
T KOG0986|consen 264 LTLMNGGDLKFHIYNH---GNPGFDEQRARFYAAEIICGLEHLHRRRIVYRDLKPENILLDDHGHVRISDLGLAVEIPEG 340 (591)
T ss_pred EEeecCCceeEEeecc---CCCCCchHHHHHHHHHHHhhHHHHHhcceeeccCChhheeeccCCCeEeeccceEEecCCC
Confidence 8888887652 22345555555445555544 77899999999988533
Q ss_pred CccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCh----HHHHHHHHHhHhhhcCChhH
Q 042825 523 GKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDP----EYIIHLATWFQKMHKNHDTF 598 (631)
Q Consensus 523 ~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~----~~~~~l~~~~~~~~~~~~~l 598 (631)
. .....+||.||||||++....|+..+|.||+||++|||+.|+.||....... .+...+.+-+.....-+++.
T Consensus 341 ~---~~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk~eEvdrr~~~~~~ey~~kFS~ea 417 (591)
T KOG0986|consen 341 K---PIRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVKREEVDRRTLEDPEEYSDKFSEEA 417 (591)
T ss_pred C---ccccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhhhhHHHHHHHHhcchhhcccccCHHH
Confidence 2 3455699999999999999999999999999999999999999997543221 11111111111112235788
Q ss_pred HHHHHhhcCCChhhHH
Q 042825 599 QMAIDKTIQLDEENLA 614 (631)
Q Consensus 599 ~~~id~~L~~d~~~r~ 614 (631)
+++....|..||.+|.
T Consensus 418 kslc~~LL~Kdp~~RL 433 (591)
T KOG0986|consen 418 KSLCEGLLTKDPEKRL 433 (591)
T ss_pred HHHHHHHHccCHHHhc
Confidence 9999999999998874
|
|
| >cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2 | Back alignment and domain information |
|---|
Probab=99.84 E-value=4.2e-20 Score=188.77 Aligned_cols=199 Identities=24% Similarity=0.339 Sum_probs=144.2
Q ss_pred CCcccceeecCCCceEEEEEEec-CCc----EEEEEEEecCCCCHHHHHHHHHHHHHHhc--------------------
Q 042825 418 NNFSEENRLGRGGVGTVYKGELK-DGT----EVGVKRMELGSVTEQGIAQFESEITVLTK-------------------- 472 (631)
Q Consensus 418 ~~f~~~~~iG~G~fg~Vyk~~~~-~g~----~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~-------------------- 472 (631)
++|+..+.||+|+||+||+|++. +|. .||+|.+.... .....+++.+|+.++.+
T Consensus 7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~-~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~l 85 (279)
T cd05109 7 TELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENT-SPKANKEILDEAYVMAGVGSPYVCRLLGICLTSTVQL 85 (279)
T ss_pred hheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCC-CHHHHHHHHHHHHHHHhcCCCCCceEEEEEcCCCcEE
Confidence 46788899999999999999854 444 48999987543 33455678888877765
Q ss_pred -------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCC
Q 042825 473 -------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPE 521 (631)
Q Consensus 473 -------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~ 521 (631)
|++.+++. +....+.+...+.++.++++| +.+||+|||+++....
T Consensus 86 ~~~~~~~g~l~~~l~----~~~~~~~~~~~~~~~~qi~~~L~~lH~~~iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~~~ 161 (279)
T cd05109 86 VTQLMPYGCLLDYVR----ENKDRIGSQDLLNWCVQIAKGMSYLEEVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDI 161 (279)
T ss_pred EEEcCCCCCHHHHHh----hccCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEcCCCcEEECCCCceeeccc
Confidence 55555553 223457888888888888876 4578999999987642
Q ss_pred CCccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChHHHHHHHHHhHhh------hcC
Q 042825 522 NGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT-GRKVVDATHSDPEYIIHLATWFQKM------HKN 594 (631)
Q Consensus 522 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~Ellt-G~~P~~~~~~~~~~~~~l~~~~~~~------~~~ 594 (631)
...........++..|+|||...+..++.++|||||||++|||++ |+.||+..... .+..+.... ...
T Consensus 162 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~-----~~~~~~~~~~~~~~~~~~ 236 (279)
T cd05109 162 DETEYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAR-----EIPDLLEKGERLPQPPIC 236 (279)
T ss_pred ccceeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHH-----HHHHHHHCCCcCCCCccC
Confidence 222111222345678999999988889999999999999999998 99998754321 122222211 112
Q ss_pred ChhHHHHHHhhcCCChhhHHhHHHHHHHHHhh
Q 042825 595 HDTFQMAIDKTIQLDEENLANVSTVAELGDHC 626 (631)
Q Consensus 595 ~~~l~~~id~~L~~d~~~r~~~~~vl~lal~C 626 (631)
+.++.+++.+|+..||+.|+++.++++....+
T Consensus 237 ~~~~~~li~~~l~~dp~~Rp~~~~l~~~l~~~ 268 (279)
T cd05109 237 TIDVYMIMVKCWMIDSECRPRFRELVDEFSRM 268 (279)
T ss_pred CHHHHHHHHHHcCCChhhCcCHHHHHHHHHHh
Confidence 46788999999999999999999998754443
|
Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve |
| >cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase | Back alignment and domain information |
|---|
Probab=99.84 E-value=9.3e-21 Score=198.13 Aligned_cols=187 Identities=21% Similarity=0.256 Sum_probs=128.9
Q ss_pred eeecCCCceEEEEEEec-CCcEEEEEEEecCCCC-HHHHHHHHHHHHHH-hc----------------------------
Q 042825 424 NRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVT-EQGIAQFESEITVL-TK---------------------------- 472 (631)
Q Consensus 424 ~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~-~~~~~~~~~Ei~~l-~~---------------------------- 472 (631)
+.||+|+||+||+|+.. +|+.||||++...... ....+++..|...+ ..
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCC
Confidence 46999999999999975 6899999999754221 12334555555443 21
Q ss_pred CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCCccccc
Q 042825 473 GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENGKHSIL 528 (631)
Q Consensus 473 gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~~~~~~ 528 (631)
|+|..++.. ...+.+.....++.+++.| +.+||+|||+++..... ....
T Consensus 81 g~L~~~l~~-----~~~~~~~~~~~~~~qi~~~l~~lH~~givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~--~~~~ 153 (323)
T cd05575 81 GELFFHLQR-----ERSFPEPRARFYAAEIASALGYLHSLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEH--SKTT 153 (323)
T ss_pred CCHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCCcEEEeccCCCcccccC--CCcc
Confidence 455554431 2356777777777777765 46789999999764211 1223
Q ss_pred cccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHhHhhhcCChhHHHHHHhhcCC
Q 042825 529 TKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQKMHKNHDTFQMAIDKTIQL 608 (631)
Q Consensus 529 ~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~id~~L~~ 608 (631)
....||+.|+|||++.+..++.++|||||||++|||++|+.||......+.....+..........+..+.+++.++|..
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~l~~ 233 (323)
T cd05575 154 STFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAEMYDNILNKPLRLKPNISVSARHLLEGLLQK 233 (323)
T ss_pred ccccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhc
Confidence 45679999999999998899999999999999999999999998643221111111111111112356889999999999
Q ss_pred ChhhHHhHH
Q 042825 609 DEENLANVS 617 (631)
Q Consensus 609 d~~~r~~~~ 617 (631)
||.+|+++.
T Consensus 234 ~p~~R~~~~ 242 (323)
T cd05575 234 DRTKRLGAK 242 (323)
T ss_pred CHHhCCCCC
Confidence 999998763
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr |
| >cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.2e-20 Score=201.65 Aligned_cols=197 Identities=18% Similarity=0.292 Sum_probs=135.7
Q ss_pred CCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCC-CHHHHHHHHHHHHHHhc-----------------------
Q 042825 418 NNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSV-TEQGIAQFESEITVLTK----------------------- 472 (631)
Q Consensus 418 ~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~-~~~~~~~~~~Ei~~l~~----------------------- 472 (631)
++|...+.||+|+||+||+++.. +++.||||++..... .....+.+.+|++++.+
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIM 80 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEE
Confidence 47888999999999999999865 689999999865322 22345678889988765
Q ss_pred -----CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCC
Q 042825 473 -----GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENG 523 (631)
Q Consensus 473 -----gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~ 523 (631)
|+|.+++.. ...+.......++.+++.| +.+||+|||+++......
T Consensus 81 E~~~gg~L~~~l~~-----~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NIll~~~~~~kl~DfGla~~~~~~~ 155 (377)
T cd05629 81 EFLPGGDLMTMLIK-----YDTFSEDVTRFYMAECVLAIEAVHKLGFIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQH 155 (377)
T ss_pred eCCCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCCCEEEeeccccccccccc
Confidence 555555532 1335555555555555543 567899999996431100
Q ss_pred cc---------------------------------------------ccccccccCcccccccccccCCCCchhhHHHHH
Q 042825 524 KH---------------------------------------------SILTKVAGTFGYLAPEYIVTGRITAKVDVYSFG 558 (631)
Q Consensus 524 ~~---------------------------------------------~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~G 558 (631)
.. ......+||+.|+|||++.+..++.++||||||
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG 235 (377)
T cd05629 156 DSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSLG 235 (377)
T ss_pred ccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeEecc
Confidence 00 000124699999999999988999999999999
Q ss_pred HHHHHHHcCCCCCCCCCCChHHHHHHHHHhHhhh-----cCChhHHHHHHhhcCCChhhH---HhHHHHHH
Q 042825 559 MILMDLITGRKVVDATHSDPEYIIHLATWFQKMH-----KNHDTFQMAIDKTIQLDEENL---ANVSTVAE 621 (631)
Q Consensus 559 vvL~ElltG~~P~~~~~~~~~~~~~l~~~~~~~~-----~~~~~l~~~id~~L~~d~~~r---~~~~~vl~ 621 (631)
|++|||+||+.||......+ ....+..|..... ..+.++.+++.++|. +|.+| +++.++++
T Consensus 236 vil~elltG~~Pf~~~~~~~-~~~~i~~~~~~~~~p~~~~~s~~~~dli~~lL~-~~~~r~~r~~~~~~l~ 304 (377)
T cd05629 236 AIMFECLIGWPPFCSENSHE-TYRKIINWRETLYFPDDIHLSVEAEDLIRRLIT-NAENRLGRGGAHEIKS 304 (377)
T ss_pred hhhhhhhcCCCCCCCCCHHH-HHHHHHccCCccCCCCCCCCCHHHHHHHHHHhc-CHhhcCCCCCHHHHhc
Confidence 99999999999997654321 2223333322211 234678999999996 67765 47777664
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of |
| >cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl | Back alignment and domain information |
|---|
Probab=99.84 E-value=5.1e-20 Score=187.15 Aligned_cols=202 Identities=21% Similarity=0.258 Sum_probs=139.6
Q ss_pred ccceeecCCCceEEEEEEecC-Cc--EEEEEEEecCCCCHHHHHHHHHHHHHHhc-------------------------
Q 042825 421 SEENRLGRGGVGTVYKGELKD-GT--EVGVKRMELGSVTEQGIAQFESEITVLTK------------------------- 472 (631)
Q Consensus 421 ~~~~~iG~G~fg~Vyk~~~~~-g~--~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~------------------------- 472 (631)
...+.||+|+||.||+|+..+ +. .||+|.++.........+.|.+|++++.+
T Consensus 2 ~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 81 (272)
T cd05075 2 ALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPSP 81 (272)
T ss_pred ccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCCc
Confidence 456889999999999999764 33 68999987654455567788889888765
Q ss_pred ---------CChhHHhHhh-hhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccc
Q 042825 473 ---------GTLGRHLFNW-EEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRL 518 (631)
Q Consensus 473 ---------gsL~~~L~~~-~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~ 518 (631)
|++.+++... .......+++.....++.+++.| +.+||+|||+++.
T Consensus 82 ~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~ 161 (272)
T cd05075 82 VVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKSFIHRDLAARNCMLNENMNVCVADFGLSKK 161 (272)
T ss_pred EEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhheEEcCCCCEEECCCCcccc
Confidence 2333332110 01122347788888888777765 4578999999987
Q ss_pred cCCCCccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChHHHHHHHHHh--HhhhcCC
Q 042825 519 VPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT-GRKVVDATHSDPEYIIHLATWF--QKMHKNH 595 (631)
Q Consensus 519 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~Ellt-G~~P~~~~~~~~~~~~~l~~~~--~~~~~~~ 595 (631)
+.............++..|+|||+..+..++.++|||||||++|||++ |+.||....... ....+.... .......
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~ 240 (272)
T cd05075 162 IYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENSE-IYDYLRQGNRLKQPPDCL 240 (272)
T ss_pred cCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHHH-HHHHHHcCCCCCCCCCCC
Confidence 642221111223346778999999988889999999999999999999 889997543211 111111111 0111223
Q ss_pred hhHHHHHHhhcCCChhhHHhHHHHHHHH
Q 042825 596 DTFQMAIDKTIQLDEENLANVSTVAELG 623 (631)
Q Consensus 596 ~~l~~~id~~L~~d~~~r~~~~~vl~la 623 (631)
+.+.+++.+|+..+|++|+++.++++..
T Consensus 241 ~~~~~li~~~l~~~p~~Rps~~~l~~~l 268 (272)
T cd05075 241 DGLYSLMSSCWLLNPKDRPSFETLRCEL 268 (272)
T ss_pred HHHHHHHHHHcCCCcccCcCHHHHHHHH
Confidence 6789999999999999999999988653
|
Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor |
| >cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7 | Back alignment and domain information |
|---|
Probab=99.84 E-value=9.3e-20 Score=184.53 Aligned_cols=204 Identities=19% Similarity=0.313 Sum_probs=147.3
Q ss_pred cCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCC-CHHHHHHHHHHHHHHhc----------------------
Q 042825 417 TNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSV-TEQGIAQFESEITVLTK---------------------- 472 (631)
Q Consensus 417 t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~-~~~~~~~~~~Ei~~l~~---------------------- 472 (631)
+++|+..+.||+|+||.||+|... +|+.||+|.++.... .....+++.+|++++.+
T Consensus 1 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv 80 (267)
T cd08224 1 LGNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIV 80 (267)
T ss_pred CCceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEE
Confidence 367889999999999999999977 799999999864332 23346788999988876
Q ss_pred ------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCC
Q 042825 473 ------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPEN 522 (631)
Q Consensus 473 ------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~ 522 (631)
|+|.+++.... .....+.+.+...++.++++| +.++|+|||+++.....
T Consensus 81 ~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~~ 159 (267)
T cd08224 81 LELADAGDLSRMIKHFK-KQKRLIPERTIWKYFVQLCSALEHMHSKRIMHRDIKPANVFITATGVVKLGDLGLGRFFSSK 159 (267)
T ss_pred EecCCCCCHHHHHHHhc-ccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecCCcChhhEEECCCCcEEEeccceeeeccCC
Confidence 46666554321 223457888888888777765 45789999999866322
Q ss_pred CccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHH-HHHHH--HhHhhh-cCChhH
Q 042825 523 GKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYI-IHLAT--WFQKMH-KNHDTF 598 (631)
Q Consensus 523 ~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~-~~l~~--~~~~~~-~~~~~l 598 (631)
. .......++..|+|||++.+..++.++|||||||++|||++|+.||.......... ..+.. +..... ....++
T Consensus 160 ~--~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (267)
T cd08224 160 T--TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEKCDYPPLPADHYSEEL 237 (267)
T ss_pred C--cccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCccHHHHHhhhhcCCCCCCChhhcCHHH
Confidence 1 12234568899999999988889999999999999999999999997543221111 01110 000001 223578
Q ss_pred HHHHHhhcCCChhhHHhHHHHHHHH
Q 042825 599 QMAIDKTIQLDEENLANVSTVAELG 623 (631)
Q Consensus 599 ~~~id~~L~~d~~~r~~~~~vl~la 623 (631)
.+++.+|+..+|.+|+++.++++..
T Consensus 238 ~~~i~~cl~~~p~~Rp~~~~il~~~ 262 (267)
T cd08224 238 RDLVSRCINPDPEKRPDISYVLQVA 262 (267)
T ss_pred HHHHHHHcCCCcccCCCHHHHHHHH
Confidence 9999999999999999999988753
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a |
| >cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2 | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.7e-20 Score=200.67 Aligned_cols=197 Identities=18% Similarity=0.248 Sum_probs=135.6
Q ss_pred CcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCC-CHHHHHHHHHHHHHHhc------------------------
Q 042825 419 NFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSV-TEQGIAQFESEITVLTK------------------------ 472 (631)
Q Consensus 419 ~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~-~~~~~~~~~~Ei~~l~~------------------------ 472 (631)
.|...+.||+|+||+||+|+.. +++.||||++..... .....+.+.+|++++.+
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E 81 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD 81 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEe
Confidence 5788899999999999999865 588999999976432 23345678899988776
Q ss_pred ----CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCCc
Q 042825 473 ----GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENGK 524 (631)
Q Consensus 473 ----gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~~ 524 (631)
|+|.+++.. ...+.+.....++.+++.| +.+||+|||+++.......
T Consensus 82 ~~~gg~L~~~l~~-----~~~~~e~~~~~~~~qi~~aL~~LH~~givHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~~~ 156 (381)
T cd05626 82 YIPGGDMMSLLIR-----MEVFPEVLARFYIAELTLAIESVHKMGFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTHN 156 (381)
T ss_pred cCCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCcHHHEEECCCCCEEEeeCcCCcccccccc
Confidence 566555532 1235555555555555443 5688999999864310000
Q ss_pred ---------------------------------------------cccccccccCcccccccccccCCCCchhhHHHHHH
Q 042825 525 ---------------------------------------------HSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGM 559 (631)
Q Consensus 525 ---------------------------------------------~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~Gv 559 (631)
.......+||+.|+|||++.+..++.++|||||||
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG~ 236 (381)
T cd05626 157 SKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGV 236 (381)
T ss_pred cccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeehhh
Confidence 00112357999999999998888999999999999
Q ss_pred HHHHHHcCCCCCCCCCCChHHHHHHHHHhHhh-----hcCChhHHHHHHhhcCC--ChhhHHhHHHHHH
Q 042825 560 ILMDLITGRKVVDATHSDPEYIIHLATWFQKM-----HKNHDTFQMAIDKTIQL--DEENLANVSTVAE 621 (631)
Q Consensus 560 vL~ElltG~~P~~~~~~~~~~~~~l~~~~~~~-----~~~~~~l~~~id~~L~~--d~~~r~~~~~vl~ 621 (631)
++|||+||+.||......+ ....+..|.... ...+.++.+++.+++.. ++..|+++.++++
T Consensus 237 il~elltG~~Pf~~~~~~~-~~~~i~~~~~~~~~~~~~~~s~~~~dli~~ll~~~~~~~~R~~~~~~l~ 304 (381)
T cd05626 237 ILFEMLVGQPPFLAPTPTE-TQLKVINWENTLHIPPQVKLSPEAVDLITKLCCSAEERLGRNGADDIKA 304 (381)
T ss_pred HHHHHHhCCCCCcCCCHHH-HHHHHHccccccCCCCCCCCCHHHHHHHHHHccCcccccCCCCHHHHhc
Confidence 9999999999998654322 223333332211 12356789999997643 3444888887764
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po |
| >cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.84 E-value=3.5e-20 Score=187.36 Aligned_cols=198 Identities=23% Similarity=0.334 Sum_probs=143.7
Q ss_pred cCCcccceeecCCCceEEEEEEecCCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc------------------------
Q 042825 417 TNNFSEENRLGRGGVGTVYKGELKDGTEVGVKRMELGSVTEQGIAQFESEITVLTK------------------------ 472 (631)
Q Consensus 417 t~~f~~~~~iG~G~fg~Vyk~~~~~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~------------------------ 472 (631)
.++|+..+.||+|+||.||+|...+++.||+|.++.... ..+++.+|++++.+
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~~---~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 81 (261)
T cd05068 5 RTSIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGTM---DPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVTE 81 (261)
T ss_pred hhheeeEEEecccCCccEEEEEecCCeEEEEEeeCCCcc---cHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeeee
Confidence 456888899999999999999987788999999875432 34668889888865
Q ss_pred ----CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCCc
Q 042825 473 ----GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENGK 524 (631)
Q Consensus 473 ----gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~~ 524 (631)
++|.+++.. .....++|.....++.+++.+ +.+||+|||+++......
T Consensus 82 ~~~~~~L~~~~~~---~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~- 157 (261)
T cd05068 82 LMKYGSLLEYLQG---GAGRALKLPQLIDMAAQVASGMAYLEAQNYIHRDLAARNVLVGENNICKVADFGLARVIKEDI- 157 (261)
T ss_pred cccCCcHHHHHhc---cCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCcceEEEcCCCCEEECCcceEEEccCCc-
Confidence 455555432 123467898888888888765 457899999998764221
Q ss_pred cccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChHHHHHHHHHhH--hhhcCChhHHHH
Q 042825 525 HSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT-GRKVVDATHSDPEYIIHLATWFQ--KMHKNHDTFQMA 601 (631)
Q Consensus 525 ~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~Ellt-G~~P~~~~~~~~~~~~~l~~~~~--~~~~~~~~l~~~ 601 (631)
.........+..|+|||++.+..++.++|||||||++|||+| |+.||.+..... ....+..... .....++.+.++
T Consensus 158 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l 236 (261)
T cd05068 158 YEAREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAE-VLQQVDQGYRMPCPPGCPKELYDI 236 (261)
T ss_pred ccccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHHH-HHHHHHcCCCCCCCCcCCHHHHHH
Confidence 111122233568999999988899999999999999999999 999997643221 1111111111 111234688999
Q ss_pred HHhhcCCChhhHHhHHHHHHH
Q 042825 602 IDKTIQLDEENLANVSTVAEL 622 (631)
Q Consensus 602 id~~L~~d~~~r~~~~~vl~l 622 (631)
+.+|+..+|.+||++.++++.
T Consensus 237 i~~~l~~~P~~Rp~~~~l~~~ 257 (261)
T cd05068 237 MLDCWKEDPDDRPTFETLQWK 257 (261)
T ss_pred HHHHhhcCcccCCCHHHHHHH
Confidence 999999999999999988764
|
Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a |
| >cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src | Back alignment and domain information |
|---|
Probab=99.84 E-value=3e-20 Score=188.08 Aligned_cols=198 Identities=25% Similarity=0.350 Sum_probs=142.8
Q ss_pred CCcccceeecCCCceEEEEEEecCCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc-------------------------
Q 042825 418 NNFSEENRLGRGGVGTVYKGELKDGTEVGVKRMELGSVTEQGIAQFESEITVLTK------------------------- 472 (631)
Q Consensus 418 ~~f~~~~~iG~G~fg~Vyk~~~~~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~------------------------- 472 (631)
++|...+.||+|+||.||+|+..+...||+|++..... ..++|.+|++++.+
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~~---~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~lv~e~~ 82 (262)
T cd05071 6 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM---SPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYM 82 (262)
T ss_pred HHeeEeeecCCCCCCcEEEEEecCCceEEEEecccCcc---CHHHHHHHHHHHHhCCCCCcceEEEEECCCCcEEEEEcC
Confidence 46888899999999999999987777899999875433 23578889888765
Q ss_pred --CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCCccc
Q 042825 473 --GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENGKHS 526 (631)
Q Consensus 473 --gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~~~~ 526 (631)
|++.+++.. .....++|.....++.+++++ +.++|+|||.++.+..... .
T Consensus 83 ~~~~L~~~~~~---~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~~-~ 158 (262)
T cd05071 83 SKGSLLDFLKG---EMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY-T 158 (262)
T ss_pred CCCcHHHHHhh---ccccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcccEEEcCCCcEEeccCCceeecccccc-c
Confidence 456555532 122356888888888887765 3478999999987642221 1
Q ss_pred cccccccCcccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChHHHHHHHH-Hh-HhhhcCChhHHHHHH
Q 042825 527 ILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT-GRKVVDATHSDPEYIIHLAT-WF-QKMHKNHDTFQMAID 603 (631)
Q Consensus 527 ~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~Ellt-G~~P~~~~~~~~~~~~~l~~-~~-~~~~~~~~~l~~~id 603 (631)
......++..|+|||+..+..++.++|||||||++|||+| |+.||........ ...+.. +. .........+.+++.
T Consensus 159 ~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~li~ 237 (262)
T cd05071 159 ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV-LDQVERGYRMPCPPECPESLHDLMC 237 (262)
T ss_pred cccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChHHH-HHHHhcCCCCCCccccCHHHHHHHH
Confidence 1223456778999999988889999999999999999999 8888875533211 111110 00 001123467899999
Q ss_pred hhcCCChhhHHhHHHHHHHH
Q 042825 604 KTIQLDEENLANVSTVAELG 623 (631)
Q Consensus 604 ~~L~~d~~~r~~~~~vl~la 623 (631)
+++..+|.+|+++.++++.-
T Consensus 238 ~~l~~~p~~Rp~~~~~~~~l 257 (262)
T cd05071 238 QCWRKEPEERPTFEYLQAFL 257 (262)
T ss_pred HHccCCcccCCCHHHHHHHH
Confidence 99999999999999887753
|
Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo |
| >cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase | Back alignment and domain information |
|---|
Probab=99.84 E-value=5.9e-21 Score=200.19 Aligned_cols=197 Identities=20% Similarity=0.269 Sum_probs=140.1
Q ss_pred CCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCC-CHHHHHHHHHHHHHHhc-----------------------
Q 042825 418 NNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSV-TEQGIAQFESEITVLTK----------------------- 472 (631)
Q Consensus 418 ~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~-~~~~~~~~~~Ei~~l~~----------------------- 472 (631)
++|...+.||+|+||+||+++.. +|+.||+|+++.... .....+.+..|+.++..
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVM 80 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEE
Confidence 46888999999999999999965 589999999976432 22344567888887754
Q ss_pred -----CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCC
Q 042825 473 -----GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENG 523 (631)
Q Consensus 473 -----gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~ 523 (631)
|+|.+++.. ....+++.....++.+++.+ +.+||+|||+++.+....
T Consensus 81 e~~~~~~L~~~l~~----~~~~l~~~~~~~~~~qi~~aL~~lH~~~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~ 156 (330)
T cd05601 81 EYQPGGDLLSLLNR----YEDQFDEDMAQFYLAELVLAIHSVHQMGYVHRDIKPENVLIDRTGHIKLADFGSAARLTANK 156 (330)
T ss_pred CCCCCCCHHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHHCCeEcccCchHheEECCCCCEEeccCCCCeECCCCC
Confidence 555555532 12356777776677666655 568999999998764222
Q ss_pred ccccccccccCcccccccccc------cCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHhH-----hhh
Q 042825 524 KHSILTKVAGTFGYLAPEYIV------TGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQ-----KMH 592 (631)
Q Consensus 524 ~~~~~~~~~gt~~Y~aPE~~~------~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~~-----~~~ 592 (631)
. .......||+.|+|||++. ...++.++|||||||++|||++|+.||....... ....+..+.. ...
T Consensus 157 ~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~-~~~~i~~~~~~~~~~~~~ 234 (330)
T cd05601 157 M-VNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAK-TYNNIMNFQRFLKFPEDP 234 (330)
T ss_pred c-eeeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHHH-HHHHHHcCCCccCCCCCC
Confidence 1 1223457999999999986 4568899999999999999999999997643321 1122222111 111
Q ss_pred cCChhHHHHHHhhcCCChhhHHhHHHHHH
Q 042825 593 KNHDTFQMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 593 ~~~~~l~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
..+.++.+++..++. +|.+|+++.++++
T Consensus 235 ~~~~~~~~li~~ll~-~p~~R~t~~~l~~ 262 (330)
T cd05601 235 KVSSDFLDLIQSLLC-GQKERLGYEGLCC 262 (330)
T ss_pred CCCHHHHHHHHHHcc-ChhhCCCHHHHhC
Confidence 235678999999997 9999999988764
|
Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor |
| >cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5 | Back alignment and domain information |
|---|
Probab=99.83 E-value=7.3e-20 Score=187.77 Aligned_cols=196 Identities=23% Similarity=0.381 Sum_probs=141.3
Q ss_pred cccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCH-HHHHHHHHHHHHHhc-------------------------
Q 042825 420 FSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTE-QGIAQFESEITVLTK------------------------- 472 (631)
Q Consensus 420 f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~-~~~~~~~~Ei~~l~~------------------------- 472 (631)
|...+.||+|+||+||++... +++.||+|.+....... .....+.+|++++.+
T Consensus 2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05632 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLTI 81 (285)
T ss_pred ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEEe
Confidence 667789999999999999865 68999999997643322 233457788888865
Q ss_pred ---CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCCcc
Q 042825 473 ---GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENGKH 525 (631)
Q Consensus 473 ---gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~~~ 525 (631)
+++.+++.. .....+++.....++.+++.| ..++|+|||+++......
T Consensus 82 ~~~~~L~~~~~~---~~~~~~~~~~~~~~~~ql~~~l~~lH~~~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~-- 156 (285)
T cd05632 82 MNGGDLKFHIYN---MGNPGFEEERALFYAAEILCGLEDLHRENTVYRDLKPENILLDDYGHIRISDLGLAVKIPEGE-- 156 (285)
T ss_pred ccCccHHHHHHH---hcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEECCCCCEEEecCCcceecCCCC--
Confidence 455555532 223468899989888888875 357899999997653211
Q ss_pred ccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHhHh-----hhcCChhHHH
Q 042825 526 SILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQK-----MHKNHDTFQM 600 (631)
Q Consensus 526 ~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~~~-----~~~~~~~l~~ 600 (631)
......|+..|+|||++.+..++.++|||||||++|||++|+.||........ ...+..-+.. ....+.++.+
T Consensus 157 -~~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (285)
T cd05632 157 -SIRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVK-REEVDRRVLETEEVYSAKFSEEAKS 234 (285)
T ss_pred -cccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHhhhccccccCccCCHHHHH
Confidence 12345799999999999888899999999999999999999999986433211 1111111111 0112457899
Q ss_pred HHHhhcCCChhhHHh-----HHHHHHH
Q 042825 601 AIDKTIQLDEENLAN-----VSTVAEL 622 (631)
Q Consensus 601 ~id~~L~~d~~~r~~-----~~~vl~l 622 (631)
++..++..+|++|++ +.++++.
T Consensus 235 li~~~l~~~P~~R~~~~~~~~~~l~~~ 261 (285)
T cd05632 235 ICKMLLTKDPKQRLGCQEEGAGEVKRH 261 (285)
T ss_pred HHHHHccCCHhHcCCCcccChHHHHcC
Confidence 999999999999998 5565543
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with |
| >cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1 | Back alignment and domain information |
|---|
Probab=99.83 E-value=7.4e-20 Score=192.14 Aligned_cols=197 Identities=20% Similarity=0.332 Sum_probs=140.3
Q ss_pred cCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc-----------------------
Q 042825 417 TNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK----------------------- 472 (631)
Q Consensus 417 t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~----------------------- 472 (631)
.++|+..+.||+|+||.||+++.. ++..+|+|.+.... ......++.+|++++.+
T Consensus 4 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 82 (333)
T cd06650 4 DDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEI-KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICM 82 (333)
T ss_pred hhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeeccc-CHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEEE
Confidence 367889999999999999999976 58899999887542 33455778999998865
Q ss_pred -----CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC-------------------------CCcEEEeeccccccCCC
Q 042825 473 -----GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG-------------------------DDMRVADFGLVRLVPEN 522 (631)
Q Consensus 473 -----gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g-------------------------~~~kl~DFGla~~~~~~ 522 (631)
|+|.+++.. ...+.+.....++.+++.+ +.+||+|||+++.....
T Consensus 83 e~~~~~~L~~~l~~-----~~~~~~~~~~~~~~~l~~~l~~lH~~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~ 157 (333)
T cd06650 83 EHMDGGSLDQVLKK-----AGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS 157 (333)
T ss_pred ecCCCCcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCChhhEEEcCCCCEEEeeCCcchhhhhh
Confidence 566666632 1235555555555554433 45789999999765321
Q ss_pred CccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHH---------------------
Q 042825 523 GKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYI--------------------- 581 (631)
Q Consensus 523 ~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~--------------------- 581 (631)
......|+..|+|||++.+..++.++|||||||++|||++|+.||..........
T Consensus 158 ----~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (333)
T cd06650 158 ----MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPPDAKELELMFGCPVEGDPAESETSPRPRP 233 (333)
T ss_pred ----ccccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcchhHHHHHhcCcccCCccccccCcccCC
Confidence 2234578999999999988889999999999999999999999997532211000
Q ss_pred ------------------HHHHHHhHhh----h---cCChhHHHHHHhhcCCChhhHHhHHHHHHHH
Q 042825 582 ------------------IHLATWFQKM----H---KNHDTFQMAIDKTIQLDEENLANVSTVAELG 623 (631)
Q Consensus 582 ------------------~~l~~~~~~~----~---~~~~~l~~~id~~L~~d~~~r~~~~~vl~la 623 (631)
..+..+.... . ..+.++++++.+||+.||++|+++.++++-.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~Rpt~~ell~h~ 300 (333)
T cd06650 234 PGRPLSSYGPDSRPPMAIFELLDYIVNEPPPKLPSGVFGAEFQDFVNKCLIKNPAERADLKQLMVHA 300 (333)
T ss_pred ccchhhhhcccccccccHHHHHHHHhcCCCccCCCCCcCHHHHHHHHHhccCCcccCcCHHHHhhCH
Confidence 0011111000 0 1235788999999999999999999987643
|
Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst |
| >cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase | Back alignment and domain information |
|---|
Probab=99.83 E-value=4.3e-20 Score=186.30 Aligned_cols=196 Identities=18% Similarity=0.243 Sum_probs=139.4
Q ss_pred eecCCCceEEEEEEec---CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc---------------------------CC
Q 042825 425 RLGRGGVGTVYKGELK---DGTEVGVKRMELGSVTEQGIAQFESEITVLTK---------------------------GT 474 (631)
Q Consensus 425 ~iG~G~fg~Vyk~~~~---~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~---------------------------gs 474 (631)
.||+|+||.||+|.++ ++..+|+|+++.........+++.+|+.++.+ |+
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~lv~e~~~~~~ 81 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICEAESWMLVMELAELGP 81 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCcEEEEecCCCCc
Confidence 5899999999999753 57899999987655445566788999888776 44
Q ss_pred hhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCCcc-cccc
Q 042825 475 LGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENGKH-SILT 529 (631)
Q Consensus 475 L~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~~~-~~~~ 529 (631)
|.+++.. ...+++.....++.+++.+ ..+||+|||+++.+...... ....
T Consensus 82 L~~~l~~-----~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 156 (257)
T cd05116 82 LNKFLQK-----NKHVTEKNITELVHQVSMGMKYLEETNFVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYKAKT 156 (257)
T ss_pred HHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchhhEEEcCCCeEEECCCccccccCCCCCeeeecC
Confidence 5444421 2357788888888887765 34689999999876422211 1112
Q ss_pred ccccCcccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChHHHHHHHHHhH-h-hhcCChhHHHHHHhhc
Q 042825 530 KVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT-GRKVVDATHSDPEYIIHLATWFQ-K-MHKNHDTFQMAIDKTI 606 (631)
Q Consensus 530 ~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~Ellt-G~~P~~~~~~~~~~~~~l~~~~~-~-~~~~~~~l~~~id~~L 606 (631)
...++..|+|||.+....++.++|||||||++|||++ |+.||......+ ....+..... . ....++++.++|..|+
T Consensus 157 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~-~~~~i~~~~~~~~~~~~~~~l~~li~~~~ 235 (257)
T cd05116 157 HGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNE-VTQMIESGERMECPQRCPPEMYDLMKLCW 235 (257)
T ss_pred CCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHH-HHHHHHCCCCCCCCCCCCHHHHHHHHHHh
Confidence 2345679999999988889999999999999999998 999998653321 1111111111 1 1123578999999999
Q ss_pred CCChhhHHhHHHHHHHHHhh
Q 042825 607 QLDEENLANVSTVAELGDHC 626 (631)
Q Consensus 607 ~~d~~~r~~~~~vl~lal~C 626 (631)
..+|++||++.++.+.-..|
T Consensus 236 ~~~p~~Rp~~~~i~~~l~~~ 255 (257)
T cd05116 236 TYGVDERPGFAVVELRLRNY 255 (257)
T ss_pred ccCchhCcCHHHHHHHHhcc
Confidence 99999999999887654433
|
Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio |
| >cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6 | Back alignment and domain information |
|---|
Probab=99.83 E-value=8.5e-20 Score=187.31 Aligned_cols=196 Identities=24% Similarity=0.390 Sum_probs=141.0
Q ss_pred cccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCH-HHHHHHHHHHHHHhc-------------------------
Q 042825 420 FSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTE-QGIAQFESEITVLTK------------------------- 472 (631)
Q Consensus 420 f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~-~~~~~~~~Ei~~l~~------------------------- 472 (631)
|+..+.||+|+||.||++... +++.||||++....... .....+.+|+.++.+
T Consensus 2 f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05630 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTL 81 (285)
T ss_pred ceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEEe
Confidence 677789999999999999865 58999999987543322 233557788888765
Q ss_pred ---CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCCcc
Q 042825 473 ---GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENGKH 525 (631)
Q Consensus 473 ---gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~~~ 525 (631)
++|.+++.. .....+.+.....++.+++.| +.++|+|||++.......
T Consensus 82 ~~g~~L~~~l~~---~~~~~l~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~-- 156 (285)
T cd05630 82 MNGGDLKFHIYH---MGEAGFEEGRAVFYAAEICCGLEDLHQERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ-- 156 (285)
T ss_pred cCCCcHHHHHHH---hcccCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCCCEEEeeccceeecCCCc--
Confidence 566665532 223457777788888777765 457899999997653221
Q ss_pred ccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHH--HHHHHHHhHhh--hcCChhHHHH
Q 042825 526 SILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEY--IIHLATWFQKM--HKNHDTFQMA 601 (631)
Q Consensus 526 ~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~--~~~l~~~~~~~--~~~~~~l~~~ 601 (631)
......|+..|+|||++.+..++.++|||||||++|||++|+.||......... ...+....... ...+.++.++
T Consensus 157 -~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 235 (285)
T cd05630 157 -TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVQEEYSEKFSPDARSL 235 (285)
T ss_pred -cccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccchHHHHHhhhhhhhhhcCccCCHHHHHH
Confidence 123457999999999999889999999999999999999999999864332111 11111111111 1234678999
Q ss_pred HHhhcCCChhhHHh-----HHHHHH
Q 042825 602 IDKTIQLDEENLAN-----VSTVAE 621 (631)
Q Consensus 602 id~~L~~d~~~r~~-----~~~vl~ 621 (631)
+.+++..||++|++ +.++++
T Consensus 236 i~~~l~~~p~~R~s~~~~~~~~~~~ 260 (285)
T cd05630 236 CKMLLCKDPKERLGCQGGGAREVKE 260 (285)
T ss_pred HHHHhhcCHHHccCCCCCchHHHHc
Confidence 99999999999998 777665
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as |
| >cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1 | Back alignment and domain information |
|---|
Probab=99.83 E-value=4.3e-20 Score=189.11 Aligned_cols=204 Identities=19% Similarity=0.292 Sum_probs=144.3
Q ss_pred CCcccceeecCCCceEEEEEEe-----cCCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc--------------------
Q 042825 418 NNFSEENRLGRGGVGTVYKGEL-----KDGTEVGVKRMELGSVTEQGIAQFESEITVLTK-------------------- 472 (631)
Q Consensus 418 ~~f~~~~~iG~G~fg~Vyk~~~-----~~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~-------------------- 472 (631)
++|+..+.||+|+||.||+|+. .++..||+|.+.... ......+|.+|++++.+
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 83 (283)
T cd05090 5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDIN-NPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPVC 83 (283)
T ss_pred hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCC-CHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCceE
Confidence 4577789999999999999984 246789999987543 33455778899988876
Q ss_pred --------CChhHHhHhhhh------------cCCCCCCHHHHHHHHHHhhcC------------------------CCc
Q 042825 473 --------GTLGRHLFNWEE------------EGLEPLEWNTRLNIALDVARG------------------------DDM 508 (631)
Q Consensus 473 --------gsL~~~L~~~~~------------~~~~~L~~~~~~~I~~~ia~g------------------------~~~ 508 (631)
++|.+++..... .....+++.+.+.++.+++++ ..+
T Consensus 84 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~nili~~~~~~ 163 (283)
T cd05090 84 MLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHFFVHKDLAARNILIGEQLHV 163 (283)
T ss_pred EEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcCeehhccccceEEEcCCCcE
Confidence 566666542110 012347788888888888765 457
Q ss_pred EEEeeccccccCCCCccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChHHHHHHHHH
Q 042825 509 RVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT-GRKVVDATHSDPEYIIHLATW 587 (631)
Q Consensus 509 kl~DFGla~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~Ellt-G~~P~~~~~~~~~~~~~l~~~ 587 (631)
||+|||+++...............++..|+|||++.+..++.++|||||||++|||++ |..||.+..... ....+...
T Consensus 164 kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~~~-~~~~~~~~ 242 (283)
T cd05090 164 KISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQE-VIEMVRKR 242 (283)
T ss_pred EeccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHH-HHHHHHcC
Confidence 8999999987643222222334456788999999988889999999999999999999 999997543211 11111110
Q ss_pred --hHhhhcCChhHHHHHHhhcCCChhhHHhHHHHHHHH
Q 042825 588 --FQKMHKNHDTFQMAIDKTIQLDEENLANVSTVAELG 623 (631)
Q Consensus 588 --~~~~~~~~~~l~~~id~~L~~d~~~r~~~~~vl~la 623 (631)
.......+..+.+++..|+..+|.+||++.++.+..
T Consensus 243 ~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l 280 (283)
T cd05090 243 QLLPCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTRL 280 (283)
T ss_pred CcCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHh
Confidence 011111246789999999999999999999987754
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly |
| >cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase | Back alignment and domain information |
|---|
Probab=99.83 E-value=7.6e-20 Score=189.89 Aligned_cols=200 Identities=18% Similarity=0.304 Sum_probs=139.4
Q ss_pred CCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc------------------------
Q 042825 418 NNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK------------------------ 472 (631)
Q Consensus 418 ~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~------------------------ 472 (631)
++|...+.||+|+||.||+|+.+ +++.||+|+++..... .....+.+|++++.+
T Consensus 6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 84 (309)
T cd07872 6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEE-GAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFE 84 (309)
T ss_pred CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccC-CcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEEe
Confidence 56888999999999999999976 5889999998754322 233457788888765
Q ss_pred ---CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCCcc
Q 042825 473 ---GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENGKH 525 (631)
Q Consensus 473 ---gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~~~ 525 (631)
+++.+++. .....+.+.....++.+++.| +.+||+|||+++......
T Consensus 85 ~~~~~l~~~~~----~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~-- 158 (309)
T cd07872 85 YLDKDLKQYMD----DCGNIMSMHNVKIFLYQILRGLAYCHRRKVLHRDLKPQNLLINERGELKLADFGLARAKSVPT-- 158 (309)
T ss_pred CCCCCHHHHHH----hcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECccccceecCCCc--
Confidence 33333332 222346777777777777655 467899999998653221
Q ss_pred ccccccccCccccccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHH--------HHh--------
Q 042825 526 SILTKVAGTFGYLAPEYIVT-GRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLA--------TWF-------- 588 (631)
Q Consensus 526 ~~~~~~~gt~~Y~aPE~~~~-~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~--------~~~-------- 588 (631)
.......+|..|+|||++.+ ..++.++||||+||++|||+||+.||......+.....+. .|.
T Consensus 159 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (309)
T cd07872 159 KTYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGISSNDEF 238 (309)
T ss_pred cccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhhcchhhh
Confidence 12234568899999998865 4689999999999999999999999976543221111110 010
Q ss_pred --------------HhhhcCChhHHHHHHhhcCCChhhHHhHHHHHHHHH
Q 042825 589 --------------QKMHKNHDTFQMAIDKTIQLDEENLANVSTVAELGD 624 (631)
Q Consensus 589 --------------~~~~~~~~~l~~~id~~L~~d~~~r~~~~~vl~lal 624 (631)
......+.++.+++.++|..||.+|+++.++++-..
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~ 288 (309)
T cd07872 239 KNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMKHAY 288 (309)
T ss_pred hhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhcChh
Confidence 000112457889999999999999999999876443
|
Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play |
| >KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.83 E-value=9.7e-22 Score=207.30 Aligned_cols=193 Identities=21% Similarity=0.343 Sum_probs=140.0
Q ss_pred eeecCCCceEEEEEEecC-CcEEEEEEEecCCCCHHHHHHHHHHHHHHhc----------------------------CC
Q 042825 424 NRLGRGGVGTVYKGELKD-GTEVGVKRMELGSVTEQGIAQFESEITVLTK----------------------------GT 474 (631)
Q Consensus 424 ~~iG~G~fg~Vyk~~~~~-g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~----------------------------gs 474 (631)
-+||+|.||+||.|+..+ ...+|||.+.... .+..+-...||...++ |+
T Consensus 581 vVLGKGTYG~VYA~RD~~tqvrIaIKEIpekd--sr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGS 658 (1226)
T KOG4279|consen 581 VVLGKGTYGTVYAARDMDTQVRIAIKEIPEKD--SREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGS 658 (1226)
T ss_pred EEeecCceeEEEeeccccceeEEEeeeccccc--chhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCc
Confidence 479999999999999664 6689999986543 2233445555554433 77
Q ss_pred hhHHhHh--------------hhhcCCCCCCHHHHHHHHHHhhcC---------CCcEEEeeccccccCCCCcccccccc
Q 042825 475 LGRHLFN--------------WEEEGLEPLEWNTRLNIALDVARG---------DDMRVADFGLVRLVPENGKHSILTKV 531 (631)
Q Consensus 475 L~~~L~~--------------~~~~~~~~L~~~~~~~I~~~ia~g---------~~~kl~DFGla~~~~~~~~~~~~~~~ 531 (631)
|...|.. |.++..++|.+.|-.+|++...+| +.+||+|||.++.+. +-...+.++
T Consensus 659 LSsLLrskWGPlKDNEstm~fYtkQILeGLkYLHen~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLA--ginP~TETF 736 (1226)
T KOG4279|consen 659 LSSLLRSKWGPLKDNESTMNFYTKQILEGLKYLHENKIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLA--GINPCTETF 736 (1226)
T ss_pred HHHHHHhccCCCccchhHHHHHHHHHHHHhhhhhhcceeeccccCCcEEEeeccceEEecccccchhhc--cCCcccccc
Confidence 7776643 233445678888888888888888 446899999998873 233455678
Q ss_pred ccCcccccccccccCC--CCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHhHhhhc----CChhHHHHHHhh
Q 042825 532 AGTFGYLAPEYIVTGR--ITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQKMHK----NHDTFQMAIDKT 605 (631)
Q Consensus 532 ~gt~~Y~aPE~~~~~~--~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~~~~~~----~~~~l~~~id~~ 605 (631)
.||..|||||++..+. |..++|||||||.+.||.||++||.........+. -+...+...+ .+.+.+.+|-+|
T Consensus 737 TGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqAAMF-kVGmyKvHP~iPeelsaeak~Filrc 815 (1226)
T KOG4279|consen 737 TGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQAAMF-KVGMYKVHPPIPEELSAEAKNFILRC 815 (1226)
T ss_pred ccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhHhhh-hhcceecCCCCcHHHHHHHHHHHHHH
Confidence 9999999999998664 99999999999999999999999986544322211 1122221111 135778999999
Q ss_pred cCCChhhHHhHHHHHH
Q 042825 606 IQLDEENLANVSTVAE 621 (631)
Q Consensus 606 L~~d~~~r~~~~~vl~ 621 (631)
..+||.+|+++.++++
T Consensus 816 Fepd~~~R~sA~~LL~ 831 (1226)
T KOG4279|consen 816 FEPDPCDRPSAKDLLQ 831 (1226)
T ss_pred cCCCcccCccHHHhcc
Confidence 9999999999998764
|
|
| >PHA03211 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=7.1e-20 Score=199.05 Aligned_cols=194 Identities=20% Similarity=0.236 Sum_probs=138.5
Q ss_pred cCCcccceeecCCCceEEEEEEecC-CcEEEEEEEecCCCCHHHHHHHHHHHHHHhc-----------------------
Q 042825 417 TNNFSEENRLGRGGVGTVYKGELKD-GTEVGVKRMELGSVTEQGIAQFESEITVLTK----------------------- 472 (631)
Q Consensus 417 t~~f~~~~~iG~G~fg~Vyk~~~~~-g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~----------------------- 472 (631)
..+|...+.||+|+||.||+++... ++.||||.... ..+.+|++++.+
T Consensus 168 ~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~--------~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~ 239 (461)
T PHA03211 168 GLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGWY--------ASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVL 239 (461)
T ss_pred cCCeEEEEEEccCCCeEEEEEEECCCCCEEEEecccc--------cCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEE
Confidence 4478999999999999999999764 88999996432 235678877765
Q ss_pred ----CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCCc
Q 042825 473 ----GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENGK 524 (631)
Q Consensus 473 ----gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~~ 524 (631)
+++..++. .....++|.+...|+.++++| +.+||+|||+++.......
T Consensus 240 e~~~~~L~~~l~----~~~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~ 315 (461)
T PHA03211 240 PKYRSDLYTYLG----ARLRPLGLAQVTAVARQLLSAIDYIHGEGIIHRDIKTENVLVNGPEDICLGDFGAACFARGSWS 315 (461)
T ss_pred EccCCCHHHHHH----hcCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECcCCHHHEEECCCCCEEEcccCCceecccccc
Confidence 33434332 223468999999999998876 4578999999987642222
Q ss_pred cccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCC------hHHHHHHHHHhH---------
Q 042825 525 HSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSD------PEYIIHLATWFQ--------- 589 (631)
Q Consensus 525 ~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~------~~~~~~l~~~~~--------- 589 (631)
........||..|+|||++.+..++.++|||||||++|||++|..|+...... ......+..+..
T Consensus 316 ~~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~ 395 (461)
T PHA03211 316 TPFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVDEFPQH 395 (461)
T ss_pred cccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhccccccCCCC
Confidence 22223467999999999999999999999999999999999988665322111 111111111110
Q ss_pred ---------------------------hhhcCChhHHHHHHhhcCCChhhHHhHHHHHHH
Q 042825 590 ---------------------------KMHKNHDTFQMAIDKTIQLDEENLANVSTVAEL 622 (631)
Q Consensus 590 ---------------------------~~~~~~~~l~~~id~~L~~d~~~r~~~~~vl~l 622 (631)
.....+.++.++|.+||..||.+|+++.++++.
T Consensus 396 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~h 455 (461)
T PHA03211 396 AGSRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLRL 455 (461)
T ss_pred cchHHHHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhhC
Confidence 001123468899999999999999999998864
|
|
| >PRK13184 pknD serine/threonine-protein kinase; Reviewed | Back alignment and domain information |
|---|
Probab=99.83 E-value=9.4e-20 Score=207.36 Aligned_cols=203 Identities=17% Similarity=0.169 Sum_probs=141.8
Q ss_pred CCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCC-CHHHHHHHHHHHHHHhc-----------------------
Q 042825 418 NNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSV-TEQGIAQFESEITVLTK----------------------- 472 (631)
Q Consensus 418 ~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~-~~~~~~~~~~Ei~~l~~----------------------- 472 (631)
++|+..++||+|+||.||+|+.. +|+.||||++..... .....++|.+|++++.+
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVM 81 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTM 81 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEE
Confidence 57889999999999999999976 589999999975432 23445679999998865
Q ss_pred -----CChhHHhHhhhh------cCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeecccc
Q 042825 473 -----GTLGRHLFNWEE------EGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVR 517 (631)
Q Consensus 473 -----gsL~~~L~~~~~------~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~ 517 (631)
|+|.+++..... .....+++...+.|+.++++| +.++|+|||+++
T Consensus 82 EY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~GIIHRDLKPeNILLd~dg~vKLiDFGLAk 161 (932)
T PRK13184 82 PYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKGVLHRDLKPDNILLGLFGEVVILDWGAAI 161 (932)
T ss_pred EcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCCccccCCchheEEEcCCCCEEEEecCcce
Confidence 677777653211 112345667777788777765 457899999998
Q ss_pred ccCCCCc----------------cccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHH
Q 042825 518 LVPENGK----------------HSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYI 581 (631)
Q Consensus 518 ~~~~~~~----------------~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~ 581 (631)
....... .......+||+.|||||++.+..++.++|||||||++|||+||+.||..........
T Consensus 162 ~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~ki~~ 241 (932)
T PRK13184 162 FKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKKGRKISY 241 (932)
T ss_pred ecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcchhhhhh
Confidence 7621110 001123579999999999999999999999999999999999999997533221110
Q ss_pred HHHHHHhH---hhhcCChhHHHHHHhhcCCChhhHHhHHHHH
Q 042825 582 IHLATWFQ---KMHKNHDTFQMAIDKTIQLDEENLANVSTVA 620 (631)
Q Consensus 582 ~~l~~~~~---~~~~~~~~l~~~id~~L~~d~~~r~~~~~vl 620 (631)
........ .....++.+.+++.+++..||.+|++..+.+
T Consensus 242 ~~~i~~P~~~~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeL 283 (932)
T PRK13184 242 RDVILSPIEVAPYREIPPFLSQIAMKALAVDPAERYSSVQEL 283 (932)
T ss_pred hhhccChhhccccccCCHHHHHHHHHHccCChhhCcCHHHHH
Confidence 00000000 0112346789999999999999996654433
|
|
| >cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase | Back alignment and domain information |
|---|
Probab=99.83 E-value=5.2e-20 Score=186.38 Aligned_cols=196 Identities=20% Similarity=0.297 Sum_probs=142.3
Q ss_pred CcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc-------------------------
Q 042825 419 NFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK------------------------- 472 (631)
Q Consensus 419 ~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~------------------------- 472 (631)
+|...+.||+|+||.||+|..+ .++.||+|++.... ....++.+|++++.+
T Consensus 7 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 83 (263)
T cd05052 7 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT---MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEF 83 (263)
T ss_pred HeEEeeecCCcccceEEEEEEecCCceEEEEEecCCc---hHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEEEe
Confidence 5777899999999999999965 48899999986542 245678889888765
Q ss_pred ---CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCCcc
Q 042825 473 ---GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENGKH 525 (631)
Q Consensus 473 ---gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~~~ 525 (631)
++|.+++.. .....+.+..++.++.++++| +.+||+|||+++...... .
T Consensus 84 ~~~~~L~~~~~~---~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~-~ 159 (263)
T cd05052 84 MTYGNLLDYLRE---CNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT-Y 159 (263)
T ss_pred CCCCcHHHHHHh---CCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCCcEEeCCCccccccccce-e
Confidence 455555532 223458888888888888765 457899999998764221 1
Q ss_pred ccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChHHHHHHHHHhHhh--hcCChhHHHHH
Q 042825 526 SILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT-GRKVVDATHSDPEYIIHLATWFQKM--HKNHDTFQMAI 602 (631)
Q Consensus 526 ~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~Ellt-G~~P~~~~~~~~~~~~~l~~~~~~~--~~~~~~l~~~i 602 (631)
.......++..|+|||++.+..++.++|||||||++|||++ |..||.+..... ....+....+.. ...+.++.+++
T Consensus 160 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~li 238 (263)
T cd05052 160 TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-VYELLEKGYRMERPEGCPPKVYELM 238 (263)
T ss_pred eccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHH-HHHHHHCCCCCCCCCCCCHHHHHHH
Confidence 11122334678999999988899999999999999999998 999997643221 111121111111 11236799999
Q ss_pred HhhcCCChhhHHhHHHHHHH
Q 042825 603 DKTIQLDEENLANVSTVAEL 622 (631)
Q Consensus 603 d~~L~~d~~~r~~~~~vl~l 622 (631)
.+|+..+|++||++.++++.
T Consensus 239 ~~cl~~~p~~Rp~~~~l~~~ 258 (263)
T cd05052 239 RACWQWNPSDRPSFAEIHQA 258 (263)
T ss_pred HHHccCCcccCCCHHHHHHH
Confidence 99999999999999998875
|
Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays |
| >cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota | Back alignment and domain information |
|---|
Probab=99.83 E-value=2.9e-20 Score=194.93 Aligned_cols=186 Identities=18% Similarity=0.248 Sum_probs=129.2
Q ss_pred eeecCCCceEEEEEEec-CCcEEEEEEEecCCC-CHHHHHHHHHHHHHHhc-----------------------------
Q 042825 424 NRLGRGGVGTVYKGELK-DGTEVGVKRMELGSV-TEQGIAQFESEITVLTK----------------------------- 472 (631)
Q Consensus 424 ~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~-~~~~~~~~~~Ei~~l~~----------------------------- 472 (631)
+.||+|+||.||+++.+ +++.||+|++..... .....+.+.+|+.++.+
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~ 80 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG 80 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCC
Confidence 47999999999999976 588999999976432 22344567778777643
Q ss_pred CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCCccccc
Q 042825 473 GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENGKHSIL 528 (631)
Q Consensus 473 gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~~~~~~ 528 (631)
|+|..++.. ...+.+.....++.+++.| +.+||+|||+++...... ...
T Consensus 81 ~~L~~~~~~-----~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~--~~~ 153 (329)
T cd05618 81 GDLMFHMQR-----QRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPG--DTT 153 (329)
T ss_pred CCHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCCCEEEeeCCccccccCCC--Ccc
Confidence 444444421 2356777777777777765 468899999998542111 123
Q ss_pred cccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCh----HHHHHHHH-HhH----hhhcCChhHH
Q 042825 529 TKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDP----EYIIHLAT-WFQ----KMHKNHDTFQ 599 (631)
Q Consensus 529 ~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~----~~~~~l~~-~~~----~~~~~~~~l~ 599 (631)
....||..|+|||++.+..++.++|||||||++|||++|+.||+...... .....+.. ... .....+.++.
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~~ 233 (329)
T cd05618 154 STFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRSLSVKAA 233 (329)
T ss_pred ccccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhcCCCCCCCCCCHHHH
Confidence 45679999999999999999999999999999999999999996321110 00111111 111 1112346788
Q ss_pred HHHHhhcCCChhhHHhH
Q 042825 600 MAIDKTIQLDEENLANV 616 (631)
Q Consensus 600 ~~id~~L~~d~~~r~~~ 616 (631)
+++.++|..||.+|+++
T Consensus 234 ~ll~~~L~~dP~~R~~~ 250 (329)
T cd05618 234 SVLKSFLNKDPKERLGC 250 (329)
T ss_pred HHHHHHhcCCHHHcCCC
Confidence 99999999999999873
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o |
| >cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase | Back alignment and domain information |
|---|
Probab=99.83 E-value=5.4e-20 Score=187.82 Aligned_cols=205 Identities=23% Similarity=0.310 Sum_probs=144.6
Q ss_pred hcCCcccceeecCCCceEEEEEEecC------CcEEEEEEEecCCCCHHHHHHHHHHHHHHhc-----------------
Q 042825 416 ATNNFSEENRLGRGGVGTVYKGELKD------GTEVGVKRMELGSVTEQGIAQFESEITVLTK----------------- 472 (631)
Q Consensus 416 ~t~~f~~~~~iG~G~fg~Vyk~~~~~------g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~----------------- 472 (631)
.+++|...+.||+|+||.||+|.+.+ +..||+|.+.... .......|.+|+.++.+
T Consensus 4 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~ 82 (277)
T cd05036 4 PRDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESC-SEQDESDFLMEALIMSKFNHQNIVRLIGVSFERL 82 (277)
T ss_pred CHHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCC-CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCC
Confidence 35678899999999999999998753 5678999876432 23345678899888865
Q ss_pred -----------CChhHHhHhhhh--cCCCCCCHHHHHHHHHHhhcC---------------------------CCcEEEe
Q 042825 473 -----------GTLGRHLFNWEE--EGLEPLEWNTRLNIALDVARG---------------------------DDMRVAD 512 (631)
Q Consensus 473 -----------gsL~~~L~~~~~--~~~~~L~~~~~~~I~~~ia~g---------------------------~~~kl~D 512 (631)
++|.+++..... .....++|.....++.+++++ ..+||+|
T Consensus 83 ~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~nil~~~~~~~~~~kl~d 162 (277)
T cd05036 83 PRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENHFIHRDIAARNCLLTCKGPGRVAKIAD 162 (277)
T ss_pred CcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchheEEEeccCCCcceEecc
Confidence 566666643211 112358899999998888765 1378999
Q ss_pred eccccccCCCCccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChHHHHHHHHHh--H
Q 042825 513 FGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT-GRKVVDATHSDPEYIIHLATWF--Q 589 (631)
Q Consensus 513 FGla~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~Ellt-G~~P~~~~~~~~~~~~~l~~~~--~ 589 (631)
||+++.+..............+..|+|||++.+..++.++|||||||++|||++ |+.||+...... ....+.... .
T Consensus 163 fg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~~-~~~~~~~~~~~~ 241 (277)
T cd05036 163 FGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQE-VMEFVTGGGRLD 241 (277)
T ss_pred CccccccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHH-HHHHHHcCCcCC
Confidence 999987632211111222334578999999988899999999999999999997 999998643321 111111110 0
Q ss_pred hhhcCChhHHHHHHhhcCCChhhHHhHHHHHHH
Q 042825 590 KMHKNHDTFQMAIDKTIQLDEENLANVSTVAEL 622 (631)
Q Consensus 590 ~~~~~~~~l~~~id~~L~~d~~~r~~~~~vl~l 622 (631)
.....+..+.+++.+|++.+|++|+++.++++.
T Consensus 242 ~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~ 274 (277)
T cd05036 242 PPKGCPGPVYRIMTDCWQHTPEDRPNFATILER 274 (277)
T ss_pred CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 111234678999999999999999999998864
|
Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well |
| >cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors | Back alignment and domain information |
|---|
Probab=99.83 E-value=7.5e-20 Score=188.43 Aligned_cols=204 Identities=21% Similarity=0.326 Sum_probs=145.4
Q ss_pred cCCcccceeecCCCceEEEEEEecC-----------------CcEEEEEEEecCCCCHHHHHHHHHHHHHHhc-------
Q 042825 417 TNNFSEENRLGRGGVGTVYKGELKD-----------------GTEVGVKRMELGSVTEQGIAQFESEITVLTK------- 472 (631)
Q Consensus 417 t~~f~~~~~iG~G~fg~Vyk~~~~~-----------------g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~------- 472 (631)
.++|+..+.||+|+||.||+++..+ +..||+|++.... .....++|.+|++++.+
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~ 82 (296)
T cd05051 4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDA-SDNAREDFLKEVKILSRLSDPNIA 82 (296)
T ss_pred hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCcc-CHHHHHHHHHHHHHHHhcCCCCEe
Confidence 3578889999999999999998642 2468999987543 33456789999988866
Q ss_pred ---------------------CChhHHhHhhhh------cCCCCCCHHHHHHHHHHhhcC--------------------
Q 042825 473 ---------------------GTLGRHLFNWEE------EGLEPLEWNTRLNIALDVARG-------------------- 505 (631)
Q Consensus 473 ---------------------gsL~~~L~~~~~------~~~~~L~~~~~~~I~~~ia~g-------------------- 505 (631)
++|.+++..... .....+++.....++.+++.|
T Consensus 83 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~i~H~dlkp~Nil 162 (296)
T cd05051 83 RLLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLNFVHRDLATRNCL 162 (296)
T ss_pred EEEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcCccccccchhcee
Confidence 566666643221 112367888888888887765
Q ss_pred ----CCcEEEeeccccccCCCCccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHc--CCCCCCCCCCChH
Q 042825 506 ----DDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT--GRKVVDATHSDPE 579 (631)
Q Consensus 506 ----~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~Ellt--G~~P~~~~~~~~~ 579 (631)
..++|+|||+++...............++..|+|||++.+..++.++|||||||++|||++ |..||.......
T Consensus 163 i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~~- 241 (296)
T cd05051 163 VGKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHLTDQQ- 241 (296)
T ss_pred ecCCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCCcChHH-
Confidence 3578999999987643322223334567889999999988889999999999999999998 677886543221
Q ss_pred HHHHHHHHh---------HhhhcCChhHHHHHHhhcCCChhhHHhHHHHHHH
Q 042825 580 YIIHLATWF---------QKMHKNHDTFQMAIDKTIQLDEENLANVSTVAEL 622 (631)
Q Consensus 580 ~~~~l~~~~---------~~~~~~~~~l~~~id~~L~~d~~~r~~~~~vl~l 622 (631)
.......+. ......+.++.+++.+|+..+|.+||++.++++.
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~ 293 (296)
T cd05051 242 VIENAGHFFRDDGRQIYLPRPPNCPKDIYELMLECWRRDEEDRPTFREIHLF 293 (296)
T ss_pred HHHHHHhccccccccccCCCccCCCHHHHHHHHHHhccChhcCCCHHHHHHH
Confidence 111222110 0011123679999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke |
| >cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.1e-19 Score=186.05 Aligned_cols=199 Identities=21% Similarity=0.300 Sum_probs=139.1
Q ss_pred CcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc-------------------------
Q 042825 419 NFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK------------------------- 472 (631)
Q Consensus 419 ~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~------------------------- 472 (631)
+|...+.||+|+||.||+|+.. +++.||||++..........+.+.+|+.++.+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFEF 80 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEec
Confidence 4778899999999999999975 58999999987543333334667888888765
Q ss_pred --CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCCccc
Q 042825 473 --GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENGKHS 526 (631)
Q Consensus 473 --gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~~~~ 526 (631)
+++.+++... .....+++.....++.+++.| +.+||+|||+++..... ..
T Consensus 81 ~~~~l~~~~~~~--~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~--~~ 156 (285)
T cd07861 81 LSMDLKKYLDSL--PKGQYMDAELVKSYLYQILQGILFCHSRRVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIP--VR 156 (285)
T ss_pred CCCCHHHHHhcC--CCCCcCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEEcCCCcEEECcccceeecCCC--cc
Confidence 3444443221 112457888888888887776 45789999999865322 11
Q ss_pred cccccccCcccccccccccC-CCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHH-----------------HHh
Q 042825 527 ILTKVAGTFGYLAPEYIVTG-RITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLA-----------------TWF 588 (631)
Q Consensus 527 ~~~~~~gt~~Y~aPE~~~~~-~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~-----------------~~~ 588 (631)
......+++.|+|||++.+. .++.++|||||||++|||+||+.||.+..........+. .+.
T Consensus 157 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (285)
T cd07861 157 VYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGVTSLPDYK 236 (285)
T ss_pred cccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhcchhhHHHH
Confidence 22344678999999988654 578999999999999999999999975432111111110 000
Q ss_pred H------------hhhcCChhHHHHHHhhcCCChhhHHhHHHHHH
Q 042825 589 Q------------KMHKNHDTFQMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 589 ~------------~~~~~~~~l~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
. .....+.++.+++.+||..||.+|+++.++++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~ 281 (285)
T cd07861 237 NTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALN 281 (285)
T ss_pred hhccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhc
Confidence 0 01112467789999999999999999998764
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 |
| >cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1 | Back alignment and domain information |
|---|
Probab=99.83 E-value=8e-20 Score=184.01 Aligned_cols=198 Identities=16% Similarity=0.295 Sum_probs=143.5
Q ss_pred CcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc-------------------------
Q 042825 419 NFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK------------------------- 472 (631)
Q Consensus 419 ~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~------------------------- 472 (631)
+|+..+.||+|+||.||+++.. +|+.||+|++..........+++.+|++++++
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDY 80 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEec
Confidence 4778899999999999999865 58999999997654445556788999988876
Q ss_pred ---CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCCcc
Q 042825 473 ---GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENGKH 525 (631)
Q Consensus 473 ---gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~~~ 525 (631)
+++.+++.. .....+.+.+...++.+++.+ +.++|+|||++.......
T Consensus 81 ~~~~~l~~~~~~---~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~-- 155 (256)
T cd08218 81 CEGGDLYKKINA---QRGVLFPEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTV-- 155 (256)
T ss_pred CCCCcHHHHHHh---ccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEEeeccceeecCcch--
Confidence 344444432 122356777888888777765 457899999998764221
Q ss_pred ccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHhH-hhhcCChhHHHHHHh
Q 042825 526 SILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQ-KMHKNHDTFQMAIDK 604 (631)
Q Consensus 526 ~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~~-~~~~~~~~l~~~id~ 604 (631)
.......|+..|+|||+..+..++.++|||||||+++||++|+.||......+.....+..... .......++.++|.+
T Consensus 156 ~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 235 (256)
T cd08218 156 ELARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNMKNLVLKIIRGSYPPVSSHYSYDLRNLVSQ 235 (256)
T ss_pred hhhhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCHHHHHHHHhcCCCCCCcccCCHHHHHHHHH
Confidence 1223356889999999998888999999999999999999999999753221111111111100 111224678999999
Q ss_pred hcCCChhhHHhHHHHHH
Q 042825 605 TIQLDEENLANVSTVAE 621 (631)
Q Consensus 605 ~L~~d~~~r~~~~~vl~ 621 (631)
|+..+|.+|+++.++++
T Consensus 236 ~l~~~p~~Rp~~~~vl~ 252 (256)
T cd08218 236 LFKRNPRDRPSVNSILE 252 (256)
T ss_pred HhhCChhhCcCHHHHhh
Confidence 99999999999999876
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti |
| >cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.83 E-value=6.9e-20 Score=184.71 Aligned_cols=195 Identities=19% Similarity=0.289 Sum_probs=139.4
Q ss_pred CcccceeecCCCceEEEEEEecCCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc--------------------------
Q 042825 419 NFSEENRLGRGGVGTVYKGELKDGTEVGVKRMELGSVTEQGIAQFESEITVLTK-------------------------- 472 (631)
Q Consensus 419 ~f~~~~~iG~G~fg~Vyk~~~~~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~-------------------------- 472 (631)
+|...+.||+|+||.||+|.++++..+|+|.+...... ..+|.+|++++.+
T Consensus 5 ~~~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~~~---~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~ 81 (256)
T cd05059 5 ELTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREGAMS---EDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEYM 81 (256)
T ss_pred HcchhhhhccCCCceEEEeEecCCccEEEEEeccCCCC---HHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEecC
Confidence 46778899999999999999887788999998654332 3467888888776
Q ss_pred --CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCCccc
Q 042825 473 --GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENGKHS 526 (631)
Q Consensus 473 --gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~~~~ 526 (631)
++|.+++.. ....++|.....|+.+++.+ +.+||+|||+++...... ..
T Consensus 82 ~~~~L~~~l~~----~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~-~~ 156 (256)
T cd05059 82 ANGCLLNYLRE----RKGKLGTEWLLDMCSDVCEAMEYLESNGFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQ-YT 156 (256)
T ss_pred CCCCHHHHHHh----cccCCCHHHHHHHHHHHHHHHHHHHHCCcccccccHhhEEECCCCcEEECCcccceeccccc-cc
Confidence 445554432 22357888888888777765 457899999998764221 11
Q ss_pred cccccccCcccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChHHHHHHHHHh--HhhhcCChhHHHHHH
Q 042825 527 ILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT-GRKVVDATHSDPEYIIHLATWF--QKMHKNHDTFQMAID 603 (631)
Q Consensus 527 ~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~Ellt-G~~P~~~~~~~~~~~~~l~~~~--~~~~~~~~~l~~~id 603 (631)
......++..|+|||++.+..++.++|||||||++|||++ |+.||+.....+ ....+..-. ......+.++.+++.
T Consensus 157 ~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~li~ 235 (256)
T cd05059 157 SSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSE-VVESVSAGYRLYRPKLAPTEVYTIMY 235 (256)
T ss_pred ccCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHH-HHHHHHcCCcCCCCCCCCHHHHHHHH
Confidence 1122234568999999998899999999999999999999 899997543221 111111110 111123567999999
Q ss_pred hhcCCChhhHHhHHHHHHH
Q 042825 604 KTIQLDEENLANVSTVAEL 622 (631)
Q Consensus 604 ~~L~~d~~~r~~~~~vl~l 622 (631)
+|+..+|++|+++.++++.
T Consensus 236 ~cl~~~p~~Rpt~~~~l~~ 254 (256)
T cd05059 236 SCWHEKPEDRPAFKKLLSQ 254 (256)
T ss_pred HHhcCChhhCcCHHHHHHH
Confidence 9999999999999998874
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows |
| >cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C | Back alignment and domain information |
|---|
Probab=99.83 E-value=7.1e-20 Score=188.38 Aligned_cols=204 Identities=22% Similarity=0.290 Sum_probs=145.5
Q ss_pred CCcccceeecCCCceEEEEEEec------CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc-------------------
Q 042825 418 NNFSEENRLGRGGVGTVYKGELK------DGTEVGVKRMELGSVTEQGIAQFESEITVLTK------------------- 472 (631)
Q Consensus 418 ~~f~~~~~iG~G~fg~Vyk~~~~------~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~------------------- 472 (631)
.+|...+.||+|+||.||+|+.. ++..+++|++.... ....+.+.+|++++.+
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 82 (291)
T cd05094 5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPT--LAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPL 82 (291)
T ss_pred HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCcc--HHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCce
Confidence 35777899999999999999743 35678999886532 3345678899988876
Q ss_pred ---------CChhHHhHhhhh-----------cCCCCCCHHHHHHHHHHhhcC------------------------CCc
Q 042825 473 ---------GTLGRHLFNWEE-----------EGLEPLEWNTRLNIALDVARG------------------------DDM 508 (631)
Q Consensus 473 ---------gsL~~~L~~~~~-----------~~~~~L~~~~~~~I~~~ia~g------------------------~~~ 508 (631)
++|.+++..... .....++|..++.++.+++.+ +.+
T Consensus 83 ~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nil~~~~~~~ 162 (291)
T cd05094 83 IMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGANLLV 162 (291)
T ss_pred EEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEccCCcE
Confidence 666666653211 112347899999999888765 457
Q ss_pred EEEeeccccccCCCCccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChHHHHHHHH-
Q 042825 509 RVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT-GRKVVDATHSDPEYIIHLAT- 586 (631)
Q Consensus 509 kl~DFGla~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~Ellt-G~~P~~~~~~~~~~~~~l~~- 586 (631)
+|+|||+++...............++..|+|||++.+..++.++|||||||++|||+| |+.||....... ....+..
T Consensus 163 ~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~-~~~~~~~~ 241 (291)
T cd05094 163 KIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTE-VIECITQG 241 (291)
T ss_pred EECCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH-HHHHHhCC
Confidence 8999999987643222222334567889999999998899999999999999999999 999987543221 1111111
Q ss_pred -HhHhhhcCChhHHHHHHhhcCCChhhHHhHHHHHHHHH
Q 042825 587 -WFQKMHKNHDTFQMAIDKTIQLDEENLANVSTVAELGD 624 (631)
Q Consensus 587 -~~~~~~~~~~~l~~~id~~L~~d~~~r~~~~~vl~lal 624 (631)
+.......+..+.+++.+|+..+|.+|+++.++++..-
T Consensus 242 ~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~ 280 (291)
T cd05094 242 RVLERPRVCPKEVYDIMLGCWQREPQQRLNIKEIYKILH 280 (291)
T ss_pred CCCCCCccCCHHHHHHHHHHcccChhhCcCHHHHHHHHH
Confidence 11111122467999999999999999999999887643
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n |
| >cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7 | Back alignment and domain information |
|---|
Probab=99.83 E-value=7.6e-20 Score=186.84 Aligned_cols=189 Identities=21% Similarity=0.329 Sum_probs=133.3
Q ss_pred ecCCCceEEEEEEec-CCcEEEEEEEecCCCCH-HHHHHHHHHHHHHhc----------------------------CCh
Q 042825 426 LGRGGVGTVYKGELK-DGTEVGVKRMELGSVTE-QGIAQFESEITVLTK----------------------------GTL 475 (631)
Q Consensus 426 iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~-~~~~~~~~Ei~~l~~----------------------------gsL 475 (631)
||+|+||.||+++.+ +|+.||+|++....... .....+..|++++.+ ++|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L 80 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDL 80 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCH
Confidence 699999999999865 58999999996533221 123345668887766 555
Q ss_pred hHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCCcccccccc
Q 042825 476 GRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENGKHSILTKV 531 (631)
Q Consensus 476 ~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~~~~~~~~~ 531 (631)
..++.. .....+++.....++.+++.| +.++|+|||++....... .....
T Consensus 81 ~~~~~~---~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~---~~~~~ 154 (277)
T cd05607 81 KYHIYN---VGERGLEMERVIHYSAQITCGILHLHSMDIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGK---TITQR 154 (277)
T ss_pred HHHHHh---ccccCCCHHHHHHHHHHHHHHHHHHHHCCEEEccCChHhEEEcCCCCEEEeeceeeeecCCCc---eeecc
Confidence 555532 233457888888888777765 457899999998764221 22345
Q ss_pred ccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHhH-h----hhcCChhHHHHHHhhc
Q 042825 532 AGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQ-K----MHKNHDTFQMAIDKTI 606 (631)
Q Consensus 532 ~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~~-~----~~~~~~~l~~~id~~L 606 (631)
.|+..|+|||++.+..++.++||||+||++|||++|+.||...............-.. . ....++++.+++.++|
T Consensus 155 ~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L 234 (277)
T cd05607 155 AGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEELKRRTLEDEVKFEHQNFTEESKDICRLFL 234 (277)
T ss_pred CCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhhHHHHHHHhhccccccccccCCHHHHHHHHHHh
Confidence 6899999999998888999999999999999999999999754332111111111110 0 0122467899999999
Q ss_pred CCChhhHHhHHHHH
Q 042825 607 QLDEENLANVSTVA 620 (631)
Q Consensus 607 ~~d~~~r~~~~~vl 620 (631)
..||++|+++.+++
T Consensus 235 ~~~P~~R~~~~~~~ 248 (277)
T cd05607 235 AKKPEDRLGSREKN 248 (277)
T ss_pred ccCHhhCCCCccch
Confidence 99999999986544
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr |
| >cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes | Back alignment and domain information |
|---|
Probab=99.83 E-value=7.1e-20 Score=185.03 Aligned_cols=197 Identities=23% Similarity=0.373 Sum_probs=142.3
Q ss_pred CCcccceeecCCCceEEEEEEecCCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc-------------------------
Q 042825 418 NNFSEENRLGRGGVGTVYKGELKDGTEVGVKRMELGSVTEQGIAQFESEITVLTK------------------------- 472 (631)
Q Consensus 418 ~~f~~~~~iG~G~fg~Vyk~~~~~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~------------------------- 472 (631)
++|...+.||+|+||.||+|..+++..+|+|++..... ..+.|.+|+.++++
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~~---~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~v~e~~ 82 (260)
T cd05069 6 ESLRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGTM---MPEAFLQEAQIMKKLRHDKLVPLYAVVSEEPIYIVTEFM 82 (260)
T ss_pred HHeeeeeeecCcCCCeEEEEEEcCCceEEEEEcccCCc---cHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCcEEEEEcC
Confidence 45778899999999999999987777899998865432 33568889888865
Q ss_pred --CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCCccc
Q 042825 473 --GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENGKHS 526 (631)
Q Consensus 473 --gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~~~~ 526 (631)
++|.+++.. .....++|..+..++.+++.+ ..++|+|||+++...... ..
T Consensus 83 ~~~~L~~~~~~---~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~-~~ 158 (260)
T cd05069 83 GKGSLLDFLKE---GDGKYLKLPQLVDMAAQIADGMAYIERMNYIHRDLRAANILVGDNLVCKIADFGLARLIEDNE-YT 158 (260)
T ss_pred CCCCHHHHHhh---CCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCCeEEECCCccceEccCCc-cc
Confidence 466666643 123457888888888877765 347899999998764221 11
Q ss_pred cccccccCcccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChHHHHHHHHHhHh--hhcCChhHHHHHH
Q 042825 527 ILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT-GRKVVDATHSDPEYIIHLATWFQK--MHKNHDTFQMAID 603 (631)
Q Consensus 527 ~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~Ellt-G~~P~~~~~~~~~~~~~l~~~~~~--~~~~~~~l~~~id 603 (631)
......++..|+|||+..+..++.++|||||||++|||+| |+.||.+....+ ....+..-... ....+..+.+++.
T Consensus 159 ~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~li~ 237 (260)
T cd05069 159 ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNRE-VLEQVERGYRMPCPQGCPESLHELMK 237 (260)
T ss_pred ccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHH-HHHHHHcCCCCCCCcccCHHHHHHHH
Confidence 1223456788999999988889999999999999999999 899997643221 11111110000 1112467899999
Q ss_pred hhcCCChhhHHhHHHHHHH
Q 042825 604 KTIQLDEENLANVSTVAEL 622 (631)
Q Consensus 604 ~~L~~d~~~r~~~~~vl~l 622 (631)
+++..+|.+||++.++++.
T Consensus 238 ~~l~~~p~~Rp~~~~i~~~ 256 (260)
T cd05069 238 LCWKKDPDERPTFEYIQSF 256 (260)
T ss_pred HHccCCcccCcCHHHHHHH
Confidence 9999999999999988764
|
Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an |
| >cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3 | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.6e-20 Score=196.51 Aligned_cols=187 Identities=22% Similarity=0.238 Sum_probs=129.0
Q ss_pred eeecCCCceEEEEEEec-CCcEEEEEEEecCCC-CHHHHHHHHHHHHHHhc-----------------------------
Q 042825 424 NRLGRGGVGTVYKGELK-DGTEVGVKRMELGSV-TEQGIAQFESEITVLTK----------------------------- 472 (631)
Q Consensus 424 ~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~-~~~~~~~~~~Ei~~l~~----------------------------- 472 (631)
+.||+|+||+||+|+.. +|+.||||++..... .....+++..|..++.+
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNG 80 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCC
Confidence 46999999999999865 689999999975422 22334556666554322
Q ss_pred CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCCccccc
Q 042825 473 GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENGKHSIL 528 (631)
Q Consensus 473 gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~~~~~~ 528 (631)
|+|..++. ....+.+.....++.++++| +.+||+|||+++..... ....
T Consensus 81 ~~L~~~l~-----~~~~~~~~~~~~~~~qi~~al~~lH~~givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~--~~~~ 153 (325)
T cd05604 81 GELFFHLQ-----RERSFPEPRARFYAAEIASALGYLHSINIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQ--SDTT 153 (325)
T ss_pred CCHHHHHH-----HcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEEeecCCcccCCCC--CCCc
Confidence 44444442 12356777777777777765 56789999999754211 1223
Q ss_pred cccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHhHhhhcCChhHHHHHHhhcCC
Q 042825 529 TKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQKMHKNHDTFQMAIDKTIQL 608 (631)
Q Consensus 529 ~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~id~~L~~ 608 (631)
....||+.|+|||++.+..++.++|||||||++|||++|+.||......+.....+..........+..+.+++.+++..
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ll~~ 233 (325)
T cd05604 154 TTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAEMYDNILHKPLVLRPGASLTAWSILEELLEK 233 (325)
T ss_pred ccccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCHHHHHHHHHcCCccCCCCCCHHHHHHHHHHhcc
Confidence 45679999999999999999999999999999999999999998643221111111111111112346788999999999
Q ss_pred ChhhHHhHH
Q 042825 609 DEENLANVS 617 (631)
Q Consensus 609 d~~~r~~~~ 617 (631)
+|.+|+++.
T Consensus 234 ~p~~R~~~~ 242 (325)
T cd05604 234 DRQRRLGAK 242 (325)
T ss_pred CHHhcCCCC
Confidence 999998764
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, |
| >PHA03207 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=1e-19 Score=195.37 Aligned_cols=196 Identities=18% Similarity=0.235 Sum_probs=138.7
Q ss_pred cCCcccceeecCCCceEEEEEEec---CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc---------------------
Q 042825 417 TNNFSEENRLGRGGVGTVYKGELK---DGTEVGVKRMELGSVTEQGIAQFESEITVLTK--------------------- 472 (631)
Q Consensus 417 t~~f~~~~~iG~G~fg~Vyk~~~~---~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~--------------------- 472 (631)
..+|...+.||+|+||.||++... .+..||||.+... +.+.+|++++.+
T Consensus 91 ~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~-------~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~l 163 (392)
T PHA03207 91 RMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG-------KTPGREIDILKTISHRAIINLIHAYRWKSTVCM 163 (392)
T ss_pred cCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc-------ccHHHHHHHHHhcCCCCccceeeeEeeCCEEEE
Confidence 457999999999999999999754 3678999988643 234567777765
Q ss_pred ------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCC
Q 042825 473 ------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPEN 522 (631)
Q Consensus 473 ------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~ 522 (631)
+++.+++ .....+.+.....++.+++.| +.++|+|||+++.....
T Consensus 164 v~e~~~~~l~~~l-----~~~~~l~~~~~~~i~~ql~~aL~~LH~~givHrDlkp~Nill~~~~~~~l~DfG~a~~~~~~ 238 (392)
T PHA03207 164 VMPKYKCDLFTYV-----DRSGPLPLEQAITIQRRLLEALAYLHGRGIIHRDVKTENIFLDEPENAVLGDFGAACKLDAH 238 (392)
T ss_pred EehhcCCCHHHHH-----HhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCCCEEEccCccccccCcc
Confidence 3333333 123468888888888887765 46789999999876432
Q ss_pred CccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCh--HHHHHHH---------------
Q 042825 523 GKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDP--EYIIHLA--------------- 585 (631)
Q Consensus 523 ~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~--~~~~~l~--------------- 585 (631)
..........||+.|+|||++....++.++|||||||++|||++|+.||.+..... .....+.
T Consensus 239 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~ 318 (392)
T PHA03207 239 PDTPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQNGS 318 (392)
T ss_pred cccccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccCCccc
Confidence 22222335679999999999998899999999999999999999999997543211 0000000
Q ss_pred ----HHhHhh----------------hcCChhHHHHHHhhcCCChhhHHhHHHHHHHHH
Q 042825 586 ----TWFQKM----------------HKNHDTFQMAIDKTIQLDEENLANVSTVAELGD 624 (631)
Q Consensus 586 ----~~~~~~----------------~~~~~~l~~~id~~L~~d~~~r~~~~~vl~lal 624 (631)
...... .....+++++|.+||..||++|+++.+++..-.
T Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~p~ 377 (392)
T PHA03207 319 TNLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSLPL 377 (392)
T ss_pred hhHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhCch
Confidence 000000 011246788999999999999999999876433
|
|
| >cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=99.83 E-value=3.8e-20 Score=190.45 Aligned_cols=206 Identities=23% Similarity=0.292 Sum_probs=146.4
Q ss_pred hcCCcccceeecCCCceEEEEEEecC------CcEEEEEEEecCCCCHHHHHHHHHHHHHHhc-----------------
Q 042825 416 ATNNFSEENRLGRGGVGTVYKGELKD------GTEVGVKRMELGSVTEQGIAQFESEITVLTK----------------- 472 (631)
Q Consensus 416 ~t~~f~~~~~iG~G~fg~Vyk~~~~~------g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~----------------- 472 (631)
..++|+..+.||+|+||.||++.... ...+|+|++.... ......++.+|++++.+
T Consensus 10 ~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~ 88 (293)
T cd05053 10 PRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDA-TEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQE 88 (293)
T ss_pred CHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCC-CHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCC
Confidence 44578888999999999999998642 3689999987543 33455678889887754
Q ss_pred ------------CChhHHhHhhhh-----------cCCCCCCHHHHHHHHHHhhcC------------------------
Q 042825 473 ------------GTLGRHLFNWEE-----------EGLEPLEWNTRLNIALDVARG------------------------ 505 (631)
Q Consensus 473 ------------gsL~~~L~~~~~-----------~~~~~L~~~~~~~I~~~ia~g------------------------ 505 (631)
|+|..++..... .....+++...+.++.+++.|
T Consensus 89 ~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~Nil~~~~ 168 (293)
T cd05053 89 GPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKKCIHRDLAARNVLVTED 168 (293)
T ss_pred CCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCCccccccceeeEEEcCC
Confidence 566666643210 223468888888888888765
Q ss_pred CCcEEEeeccccccCCCCccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChHHHHHH
Q 042825 506 DDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT-GRKVVDATHSDPEYIIHL 584 (631)
Q Consensus 506 ~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~Ellt-G~~P~~~~~~~~~~~~~l 584 (631)
+.+||+|||+++.+.............++..|+|||+..+..++.++|||||||++|||++ |..||......+ ....+
T Consensus 169 ~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~-~~~~~ 247 (293)
T cd05053 169 HVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEE-LFKLL 247 (293)
T ss_pred CeEEeCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCCHHH-HHHHH
Confidence 4578999999987643222222223345678999999988889999999999999999998 999987543221 11111
Q ss_pred HHHh--HhhhcCChhHHHHHHhhcCCChhhHHhHHHHHHHH
Q 042825 585 ATWF--QKMHKNHDTFQMAIDKTIQLDEENLANVSTVAELG 623 (631)
Q Consensus 585 ~~~~--~~~~~~~~~l~~~id~~L~~d~~~r~~~~~vl~la 623 (631)
.... ........++.+++.+|+..+|.+|+++.++++..
T Consensus 248 ~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~l 288 (293)
T cd05053 248 KEGYRMEKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVEDL 288 (293)
T ss_pred HcCCcCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHH
Confidence 1111 11112246789999999999999999999988753
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, |
| >cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor | Back alignment and domain information |
|---|
Probab=99.83 E-value=8.6e-20 Score=187.48 Aligned_cols=207 Identities=20% Similarity=0.326 Sum_probs=143.2
Q ss_pred hcCCcccceeecCCCceEEEEEEecC------CcEEEEEEEecCCCCHHHHHHHHHHHHHHhc-----------------
Q 042825 416 ATNNFSEENRLGRGGVGTVYKGELKD------GTEVGVKRMELGSVTEQGIAQFESEITVLTK----------------- 472 (631)
Q Consensus 416 ~t~~f~~~~~iG~G~fg~Vyk~~~~~------g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~----------------- 472 (631)
..++|+..+.||+|+||.||+|+.++ +..||+|.+.... ......++.+|+.++++
T Consensus 4 ~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~ 82 (288)
T cd05061 4 SREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESA-SLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQ 82 (288)
T ss_pred cHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcC-CHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCC
Confidence 45688899999999999999997542 4589999886443 22344567888887765
Q ss_pred -----------CChhHHhHhhhhc-----CCCCCCHHHHHHHHHHhhcC------------------------CCcEEEe
Q 042825 473 -----------GTLGRHLFNWEEE-----GLEPLEWNTRLNIALDVARG------------------------DDMRVAD 512 (631)
Q Consensus 473 -----------gsL~~~L~~~~~~-----~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~D 512 (631)
|+|.+++...... ......+.....++.+++.+ +.++++|
T Consensus 83 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dikp~nili~~~~~~~L~D 162 (288)
T cd05061 83 PTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGD 162 (288)
T ss_pred CcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCCChheEEEcCCCcEEECc
Confidence 6777777542211 12344566667777776654 4578999
Q ss_pred eccccccCCCCccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChHHHHHHH-HHh-H
Q 042825 513 FGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT-GRKVVDATHSDPEYIIHLA-TWF-Q 589 (631)
Q Consensus 513 FGla~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~Ellt-G~~P~~~~~~~~~~~~~l~-~~~-~ 589 (631)
||+++...............++..|+|||++.+..++.++|||||||++|||++ |+.||......+ ....+. ... .
T Consensus 163 fg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~~-~~~~~~~~~~~~ 241 (288)
T cd05061 163 FGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQ-VLKFVMDGGYLD 241 (288)
T ss_pred CCccccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCHHH-HHHHHHcCCCCC
Confidence 999986642222111222345778999999988889999999999999999999 788987543221 111111 000 1
Q ss_pred hhhcCChhHHHHHHhhcCCChhhHHhHHHHHHHHH
Q 042825 590 KMHKNHDTFQMAIDKTIQLDEENLANVSTVAELGD 624 (631)
Q Consensus 590 ~~~~~~~~l~~~id~~L~~d~~~r~~~~~vl~lal 624 (631)
.....+..+.+++..|+..+|.+|+++.++++...
T Consensus 242 ~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~ 276 (288)
T cd05061 242 QPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLK 276 (288)
T ss_pred CCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHH
Confidence 11122467999999999999999999999987654
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta |
| >cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10 | Back alignment and domain information |
|---|
Probab=99.83 E-value=7.3e-20 Score=185.75 Aligned_cols=199 Identities=17% Similarity=0.227 Sum_probs=142.7
Q ss_pred CCcccceeecCCCceEEEEEEec----CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc---------------------
Q 042825 418 NNFSEENRLGRGGVGTVYKGELK----DGTEVGVKRMELGSVTEQGIAQFESEITVLTK--------------------- 472 (631)
Q Consensus 418 ~~f~~~~~iG~G~fg~Vyk~~~~----~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~--------------------- 472 (631)
++|+..+.||+|+||.||+|.++ .+..||+|+++... .....+.|.+|+.++.+
T Consensus 5 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l 83 (266)
T cd05064 5 KSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGC-SDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMMI 83 (266)
T ss_pred HHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCC-CHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCcEE
Confidence 46788899999999999999864 36689999987643 33445678999998865
Q ss_pred -------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCC
Q 042825 473 -------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPE 521 (631)
Q Consensus 473 -------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~ 521 (631)
|+|.+++.. ....+.|.+.+.++.+++.| ..++++|||.+.....
T Consensus 84 v~e~~~~~~L~~~l~~----~~~~l~~~~~~~~~~~i~~al~~lH~~~iiH~dikp~nili~~~~~~~l~dfg~~~~~~~ 159 (266)
T cd05064 84 VTEYMSNGALDSFLRK----HEGQLVAGQLMGMLPGLASGMKYLSEMGYVHKGLAAHKVLVNSDLVCKISGFRRLQEDKS 159 (266)
T ss_pred EEEeCCCCcHHHHHHh----CCCCCCHHHHHHHHHHHHHHHHHHHHCCEeeccccHhhEEEcCCCcEEECCCcccccccc
Confidence 566666542 22468899999999888876 3468999998765421
Q ss_pred CCccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChHHHHHHHHHhHh--hhcCChhH
Q 042825 522 NGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT-GRKVVDATHSDPEYIIHLATWFQK--MHKNHDTF 598 (631)
Q Consensus 522 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~Ellt-G~~P~~~~~~~~~~~~~l~~~~~~--~~~~~~~l 598 (631)
.. ........++..|+|||++.+..++.++|||||||++||+++ |+.||....... ....+...... .......+
T Consensus 160 ~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 237 (266)
T cd05064 160 EA-IYTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQD-VIKAVEDGFRLPAPRNCPNLL 237 (266)
T ss_pred cc-hhcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHHH-HHHHHHCCCCCCCCCCCCHHH
Confidence 11 111122345678999999988999999999999999999775 999997653221 11111111100 11123578
Q ss_pred HHHHHhhcCCChhhHHhHHHHHHHH
Q 042825 599 QMAIDKTIQLDEENLANVSTVAELG 623 (631)
Q Consensus 599 ~~~id~~L~~d~~~r~~~~~vl~la 623 (631)
.+++.+|+..+|.+||++.++.++.
T Consensus 238 ~~li~~c~~~~p~~RP~~~~i~~~l 262 (266)
T cd05064 238 HQLMLDCWQKERGERPRFSQIHSIL 262 (266)
T ss_pred HHHHHHHcCCCchhCCCHHHHHHHH
Confidence 9999999999999999999988763
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor |
| >KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.83 E-value=3.9e-20 Score=192.50 Aligned_cols=200 Identities=19% Similarity=0.307 Sum_probs=150.6
Q ss_pred CCcccceeecCCCceEEEEEEecCCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc-------------------------
Q 042825 418 NNFSEENRLGRGGVGTVYKGELKDGTEVGVKRMELGSVTEQGIAQFESEITVLTK------------------------- 472 (631)
Q Consensus 418 ~~f~~~~~iG~G~fg~Vyk~~~~~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~------------------------- 472 (631)
+.....+.||+|.||+|-.|....+..||||+++... ....+.+|.+||++|.+
T Consensus 538 s~L~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a-~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI~EY 616 (807)
T KOG1094|consen 538 SRLRFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDA-TKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCMITEY 616 (807)
T ss_pred hheehhhhhcCcccceeEEEEecCceEEEEeecCccc-chhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHHHHHH
Confidence 3445578999999999999999888999999998765 34467899999999987
Q ss_pred ---CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCCcc
Q 042825 473 ---GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENGKH 525 (631)
Q Consensus 473 ---gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~~~ 525 (631)
|+|.+++... ....++-...++|+.|+|.| .++||+|||++|.++..+.+
T Consensus 617 mEnGDLnqFl~ah---eapt~~t~~~vsi~tqiasgmaYLes~nfVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg~yy 693 (807)
T KOG1094|consen 617 MENGDLNQFLSAH---ELPTAETAPGVSICTQIASGMAYLESLNFVHRDLATRNCLVDGEFTIKIADFGMSRNLYSGDYY 693 (807)
T ss_pred HhcCcHHHHHHhc---cCcccccchhHHHHHHHHHHHHHHHhhchhhccccccceeecCcccEEecCcccccccccCCce
Confidence 7787777532 22224555667788888877 46799999999988866666
Q ss_pred ccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHc--CCCCCCCCCCChHHHHHHHHHhHh---------hhcC
Q 042825 526 SILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT--GRKVVDATHSDPEYIIHLATWFQK---------MHKN 594 (631)
Q Consensus 526 ~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~Ellt--G~~P~~~~~~~~~~~~~l~~~~~~---------~~~~ 594 (631)
......+-+++|||+|.+.-+++|.++|||+|||+|||+++ .+.||.....+. ...+.....+. ..--
T Consensus 694 ~vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~-vven~~~~~~~~~~~~~l~~P~~c 772 (807)
T KOG1094|consen 694 RVQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQ-VVENAGEFFRDQGRQVVLSRPPAC 772 (807)
T ss_pred eeecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHH-HHHhhhhhcCCCCcceeccCCCcC
Confidence 66667788999999999999999999999999999999876 789997553321 11111111110 0011
Q ss_pred ChhHHHHHHhhcCCChhhHHhHHHHHHH
Q 042825 595 HDTFQMAIDKTIQLDEENLANVSTVAEL 622 (631)
Q Consensus 595 ~~~l~~~id~~L~~d~~~r~~~~~vl~l 622 (631)
..++-+++-+|...|.++||+..++...
T Consensus 773 p~~lyelml~Cw~~es~~RPsFe~lh~~ 800 (807)
T KOG1094|consen 773 PQGLYELMLRCWRRESEQRPSFEQLHLF 800 (807)
T ss_pred cHHHHHHHHHHhchhhhcCCCHHHHHHH
Confidence 3567788888888888999998876543
|
|
| >KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.83 E-value=5.8e-20 Score=193.36 Aligned_cols=198 Identities=21% Similarity=0.318 Sum_probs=149.5
Q ss_pred hhcCCcccceeecCCCceEEEEEEecC-CcEEEEEEEecCCCC-HHHHHHHHHHHHHHhc--------------------
Q 042825 415 NATNNFSEENRLGRGGVGTVYKGELKD-GTEVGVKRMELGSVT-EQGIAQFESEITVLTK-------------------- 472 (631)
Q Consensus 415 ~~t~~f~~~~~iG~G~fg~Vyk~~~~~-g~~vAvK~l~~~~~~-~~~~~~~~~Ei~~l~~-------------------- 472 (631)
...+.|+..+.||+|.||.||+++.+. |+.+|+|.+.+.... ......+.+|+.+|.+
T Consensus 32 ~~~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~ 111 (382)
T KOG0032|consen 32 DIKEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSV 111 (382)
T ss_pred cccccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeE
Confidence 345578888999999999999999775 999999999776542 2345788999999987
Q ss_pred ---------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC----------------------------CCcEEEeecc
Q 042825 473 ---------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG----------------------------DDMRVADFGL 515 (631)
Q Consensus 473 ---------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g----------------------------~~~kl~DFGl 515 (631)
|.|.+.+... .++......++.+++.+ ..+|++|||+
T Consensus 112 ~lvmEL~~GGeLfd~i~~~------~~sE~da~~~~~~il~av~~lH~~gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGl 185 (382)
T KOG0032|consen 112 YLVMELCEGGELFDRIVKK------HYSERDAAGIIRQILEAVKYLHSLGVVHRDLKPENLLLASKDEGSGRIKLIDFGL 185 (382)
T ss_pred EEEEEecCCchHHHHHHHc------cCCHHHHHHHHHHHHHHHHHHHhCCceeccCCHHHeeeccccCCCCcEEEeeCCC
Confidence 6666666432 15555555555555544 2588999999
Q ss_pred ccccCCCCccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHH-H--hHhhh
Q 042825 516 VRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLAT-W--FQKMH 592 (631)
Q Consensus 516 a~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~-~--~~~~~ 592 (631)
|+.... .......+||+.|+|||++....|+..+||||.||++|.|++|..||.+..........+.. | ....+
T Consensus 186 a~~~~~---~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~~i~~~~~~f~~~~w 262 (382)
T KOG0032|consen 186 AKFIKP---GERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFLAILRGDFDFTSEPW 262 (382)
T ss_pred ceEccC---CceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHHHHHcCCCCCCCCCc
Confidence 998753 33466789999999999999999999999999999999999999999976544322211111 1 11111
Q ss_pred -cCChhHHHHHHhhcCCChhhHHhHHHHHH
Q 042825 593 -KNHDTFQMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 593 -~~~~~l~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
..+..++++|+.++..||..|.++.++++
T Consensus 263 ~~is~~akd~i~~ll~~dp~~R~ta~~~L~ 292 (382)
T KOG0032|consen 263 DDISESAKDFIRKLLEFDPRKRLTAAQALQ 292 (382)
T ss_pred cccCHHHHHHHHHhcccCcccCCCHHHHhc
Confidence 12568899999999999999999998876
|
|
| >cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta | Back alignment and domain information |
|---|
Probab=99.82 E-value=4.5e-20 Score=193.27 Aligned_cols=186 Identities=18% Similarity=0.277 Sum_probs=131.5
Q ss_pred eeecCCCceEEEEEEec-CCcEEEEEEEecCCCC-HHHHHHHHHHHHHHhc-----------------------------
Q 042825 424 NRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVT-EQGIAQFESEITVLTK----------------------------- 472 (631)
Q Consensus 424 ~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~-~~~~~~~~~Ei~~l~~----------------------------- 472 (631)
++||+|+||+||+|+.. +++.||||++...... ....+.+.+|+.++.+
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNG 80 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCC
Confidence 47999999999999965 5889999999864322 2344567788877654
Q ss_pred CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCCccccc
Q 042825 473 GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENGKHSIL 528 (631)
Q Consensus 473 gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~~~~~~ 528 (631)
|+|..++.. ...+++.....++.+++.| +.+||+|||+++...... ...
T Consensus 81 ~~L~~~~~~-----~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~--~~~ 153 (327)
T cd05617 81 GDLMFHMQR-----QRKLPEEHARFYAAEICIALNFLHERGIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPG--DTT 153 (327)
T ss_pred CcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEeCCCCEEEeccccceeccCCC--Cce
Confidence 445444421 2357888888888888766 567899999997532111 123
Q ss_pred cccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChH---HHHHHHHHhHh----hhcCChhHHHH
Q 042825 529 TKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPE---YIIHLATWFQK----MHKNHDTFQMA 601 (631)
Q Consensus 529 ~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~---~~~~l~~~~~~----~~~~~~~l~~~ 601 (631)
...+||+.|+|||++.+..++.++|||||||++|||++|+.||+....... ........... ....+..+.++
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l 233 (327)
T cd05617 154 STFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILEKPIRIPRFLSVKASHV 233 (327)
T ss_pred ecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHHhCCCCCCCCCCHHHHHH
Confidence 456799999999999999999999999999999999999999964322110 00111111111 11124678999
Q ss_pred HHhhcCCChhhHHhH
Q 042825 602 IDKTIQLDEENLANV 616 (631)
Q Consensus 602 id~~L~~d~~~r~~~ 616 (631)
+.++|..||.+|+++
T Consensus 234 i~~~L~~dP~~R~~~ 248 (327)
T cd05617 234 LKGFLNKDPKERLGC 248 (327)
T ss_pred HHHHhccCHHHcCCC
Confidence 999999999999864
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways |
| >cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2 | Back alignment and domain information |
|---|
Probab=99.82 E-value=3.1e-20 Score=197.67 Aligned_cols=201 Identities=17% Similarity=0.171 Sum_probs=135.9
Q ss_pred HhhcCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCC-CHHHHHHHHHHHHHHhc-------------------
Q 042825 414 RNATNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSV-TEQGIAQFESEITVLTK------------------- 472 (631)
Q Consensus 414 ~~~t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~-~~~~~~~~~~Ei~~l~~------------------- 472 (631)
....++|+..+.||+|+||.||+++.. +++.||+|.+..... .....+.+.+|++++..
T Consensus 39 ~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~ 118 (370)
T cd05621 39 QMKAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYL 118 (370)
T ss_pred CCCHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEE
Confidence 344578999999999999999999976 588999999865322 22234557788887755
Q ss_pred ---------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeecccccc
Q 042825 473 ---------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLV 519 (631)
Q Consensus 473 ---------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~ 519 (631)
|+|.+++.. ..++......++.+++.| +.+||+|||+++..
T Consensus 119 ~lv~Ey~~gg~L~~~l~~------~~~~~~~~~~~~~qil~aL~~LH~~~IvHrDLKp~NILl~~~~~~kL~DFG~a~~~ 192 (370)
T cd05621 119 YMVMEYMPGGDLVNLMSN------YDVPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKM 192 (370)
T ss_pred EEEEcCCCCCcHHHHHHh------cCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCCCEEEEecccceec
Confidence 566665532 134555555566555554 56899999999876
Q ss_pred CCCCccccccccccCcccccccccccC----CCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHhH-----h
Q 042825 520 PENGKHSILTKVAGTFGYLAPEYIVTG----RITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQ-----K 590 (631)
Q Consensus 520 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~----~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~~-----~ 590 (631)
.... .......+||+.|+|||++.+. .++.++||||+||++|||++|+.||....... ....+..... .
T Consensus 193 ~~~~-~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~~-~~~~i~~~~~~~~~p~ 270 (370)
T cd05621 193 DETG-MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVG-TYSKIMDHKNSLNFPE 270 (370)
T ss_pred ccCC-ceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHHH-HHHHHHhCCcccCCCC
Confidence 4221 1122456799999999998654 37889999999999999999999998653321 1112221100 0
Q ss_pred hhcCChhHHHHHHhhcCCChh--hHHhHHHHHHH
Q 042825 591 MHKNHDTFQMAIDKTIQLDEE--NLANVSTVAEL 622 (631)
Q Consensus 591 ~~~~~~~l~~~id~~L~~d~~--~r~~~~~vl~l 622 (631)
....+..+++++..++..++. .|+++.++++-
T Consensus 271 ~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~h 304 (370)
T cd05621 271 DVEISKHAKNLICAFLTDREVRLGRNGVEEIKQH 304 (370)
T ss_pred cccCCHHHHHHHHHHccCchhccCCCCHHHHhcC
Confidence 012246788999999864333 26788877653
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found |
| >cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.4e-19 Score=182.88 Aligned_cols=198 Identities=19% Similarity=0.289 Sum_probs=139.5
Q ss_pred CCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCC---HHHHHHHHHHHHHHhc---------------------
Q 042825 418 NNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVT---EQGIAQFESEITVLTK--------------------- 472 (631)
Q Consensus 418 ~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~---~~~~~~~~~Ei~~l~~--------------------- 472 (631)
++|+..+.||+|+||.||+|... +++.||+|.+...... ....+.+.+|++++.+
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~ 81 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSI 81 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEE
Confidence 57889999999999999999865 5899999998754322 2234578889988866
Q ss_pred -------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCC
Q 042825 473 -------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPE 521 (631)
Q Consensus 473 -------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~ 521 (631)
+++.+++.. ...+.+.....++.+++.| +.++|+|||+++....
T Consensus 82 v~e~~~~~~l~~~~~~-----~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~~ 156 (263)
T cd06625 82 FMEYMPGGSVKDQLKA-----YGALTETVTRKYTRQILEGVEYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQT 156 (263)
T ss_pred EEEECCCCcHHHHHHH-----hCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeecccceeccc
Confidence 344444421 1245666666666666554 4678999999986532
Q ss_pred CCccc-cccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHhHh-h--hcCChh
Q 042825 522 NGKHS-ILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQK-M--HKNHDT 597 (631)
Q Consensus 522 ~~~~~-~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~~~-~--~~~~~~ 597 (631)
..... ......|+..|+|||++.+..++.++||||+||++|||++|+.||....... .......+... . ...+.+
T Consensus 157 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 235 (263)
T cd06625 157 ICSSGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAMA-AIFKIATQPTNPQLPSHVSPD 235 (263)
T ss_pred cccccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccchHH-HHHHHhccCCCCCCCccCCHH
Confidence 21111 1134568899999999998889999999999999999999999997542221 11111111110 0 122468
Q ss_pred HHHHHHhhcCCChhhHHhHHHHHH
Q 042825 598 FQMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 598 l~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
+.+++.+++..+|.+|+++.++++
T Consensus 236 ~~~li~~~l~~~p~~Rpt~~~ll~ 259 (263)
T cd06625 236 ARNFLRRTFVENAKKRPSAEELLR 259 (263)
T ss_pred HHHHHHHHhhcCcccCCCHHHHhh
Confidence 899999999999999999998875
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t |
| >KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.5e-20 Score=195.54 Aligned_cols=197 Identities=21% Similarity=0.301 Sum_probs=138.6
Q ss_pred CcccceeecCCCceEEEEEEec-CCcEEEEEEEecC-CCCHHHHHHHHHHHHHHhc------------------------
Q 042825 419 NFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELG-SVTEQGIAQFESEITVLTK------------------------ 472 (631)
Q Consensus 419 ~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~-~~~~~~~~~~~~Ei~~l~~------------------------ 472 (631)
-|...+.||.|+||.||-++.. +...||||+|... ..+.....++..|+.++.+
T Consensus 27 lf~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVME 106 (948)
T KOG0577|consen 27 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVME 106 (948)
T ss_pred HHHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHH
Confidence 3667789999999999999954 6889999999753 2344567788999998876
Q ss_pred ---CChhHHhHhh------------hhcCCCCCCHHHHHHHHHHhhcC--------CCcEEEeeccccccCCCCcccccc
Q 042825 473 ---GTLGRHLFNW------------EEEGLEPLEWNTRLNIALDVARG--------DDMRVADFGLVRLVPENGKHSILT 529 (631)
Q Consensus 473 ---gsL~~~L~~~------------~~~~~~~L~~~~~~~I~~~ia~g--------~~~kl~DFGla~~~~~~~~~~~~~ 529 (631)
|+-.+.+.-. ......+|.|.|.++.++...++ +.+|++|||-|..+. ...
T Consensus 107 YClGSAsDlleVhkKplqEvEIAAi~~gaL~gLaYLHS~~~IHRDiKAGNILLse~g~VKLaDFGSAsi~~------PAn 180 (948)
T KOG0577|consen 107 YCLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNRIHRDIKAGNILLSEPGLVKLADFGSASIMA------PAN 180 (948)
T ss_pred HHhccHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhhHHhhhccccceEecCCCeeeeccccchhhcC------chh
Confidence 4444443210 01112344555555444443333 457899999998763 346
Q ss_pred ccccCcccccccccc---cCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHhHhhhcC---ChhHHHHHH
Q 042825 530 KVAGTFGYLAPEYIV---TGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQKMHKN---HDTFQMAID 603 (631)
Q Consensus 530 ~~~gt~~Y~aPE~~~---~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~~~~~~~---~~~l~~~id 603 (631)
.++||+.|||||++. .+.|+-|+||||+||+-.||.-+++|...++... ...++..--...+.. ++.+..+||
T Consensus 181 sFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAMS-ALYHIAQNesPtLqs~eWS~~F~~Fvd 259 (948)
T KOG0577|consen 181 SFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS-ALYHIAQNESPTLQSNEWSDYFRNFVD 259 (948)
T ss_pred cccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHHH-HHHHHHhcCCCCCCCchhHHHHHHHHH
Confidence 789999999999985 4679999999999999999999999987654321 122333211111111 357899999
Q ss_pred hhcCCChhhHHhHHHHHHH
Q 042825 604 KTIQLDEENLANVSTVAEL 622 (631)
Q Consensus 604 ~~L~~d~~~r~~~~~vl~l 622 (631)
.||+.-|.+||+..++++-
T Consensus 260 ~CLqKipqeRptse~ll~H 278 (948)
T KOG0577|consen 260 SCLQKIPQERPTSEELLKH 278 (948)
T ss_pred HHHhhCcccCCcHHHHhhc
Confidence 9999999999998887754
|
|
| >cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6 | Back alignment and domain information |
|---|
Probab=99.82 E-value=2e-19 Score=183.86 Aligned_cols=199 Identities=21% Similarity=0.273 Sum_probs=138.3
Q ss_pred CCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc------------------------
Q 042825 418 NNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK------------------------ 472 (631)
Q Consensus 418 ~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~------------------------ 472 (631)
++|+..+.||+|+||.||+++.. +|+.||+|+++...... ...++..|+..+.+
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~ 79 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQ-EQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICM 79 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcH-HHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEh
Confidence 47888999999999999999976 59999999987653322 33455556554322
Q ss_pred ----CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC-------------------------CCcEEEeeccccccCCCC
Q 042825 473 ----GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG-------------------------DDMRVADFGLVRLVPENG 523 (631)
Q Consensus 473 ----gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g-------------------------~~~kl~DFGla~~~~~~~ 523 (631)
|++.+++..... ....+++.....++.+++.| +.+||+|||+++.....
T Consensus 80 e~~~~~l~~~l~~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~~- 157 (283)
T cd06617 80 EVMDTSLDKFYKKVYD-KGLTIPEDILGKIAVSIVKALEYLHSKLSVIHRDVKPSNVLINRNGQVKLCDFGISGYLVDS- 157 (283)
T ss_pred hhhcccHHHHHHHhcc-CCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEeecccccccccc-
Confidence 455555543221 22467888888888777754 35789999999876321
Q ss_pred ccccccccccCccccccccccc----CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHhHhhh---cCCh
Q 042825 524 KHSILTKVAGTFGYLAPEYIVT----GRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQKMH---KNHD 596 (631)
Q Consensus 524 ~~~~~~~~~gt~~Y~aPE~~~~----~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~~~~~---~~~~ 596 (631)
...+...|+..|+|||++.+ ..++.++|||||||++|||++|+.||...............-..... ..++
T Consensus 158 --~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (283)
T cd06617 158 --VAKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPFQQLKQVVEEPSPQLPAEKFSP 235 (283)
T ss_pred --cccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccCHHHHHHHHhcCCCCCCccccCH
Confidence 11233568899999998864 44788999999999999999999999753332111111111110111 1246
Q ss_pred hHHHHHHhhcCCChhhHHhHHHHHH
Q 042825 597 TFQMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 597 ~l~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
++.+++.+++..+|.+|+++.++++
T Consensus 236 ~l~~li~~~l~~~p~~Rp~~~~il~ 260 (283)
T cd06617 236 EFQDFVNKCLKKNYKERPNYPELLQ 260 (283)
T ss_pred HHHHHHHHHccCChhhCcCHHHHhc
Confidence 7899999999999999999998875
|
Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs |
| >cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5 | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.1e-19 Score=182.86 Aligned_cols=198 Identities=17% Similarity=0.316 Sum_probs=142.3
Q ss_pred CcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc-------------------------
Q 042825 419 NFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK------------------------- 472 (631)
Q Consensus 419 ~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~------------------------- 472 (631)
+|...+.||+|+||.||+|..+ +|..+|+|.+..........+.+.+|++++++
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~ 80 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVMEY 80 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEec
Confidence 4778899999999999999976 48899999987654433455678889888775
Q ss_pred ---CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC-------------------------CCcEEEeeccccccCCCCc
Q 042825 473 ---GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG-------------------------DDMRVADFGLVRLVPENGK 524 (631)
Q Consensus 473 ---gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g-------------------------~~~kl~DFGla~~~~~~~~ 524 (631)
++|.+++.. .....+++.....++.+++.+ ..+||+|||.+.......
T Consensus 81 ~~~~~L~~~~~~---~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~- 156 (257)
T cd08225 81 CDGGDLMKRINR---QRGVLFSEDQILSWFVQISLGLKHIHDRKILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSM- 156 (257)
T ss_pred CCCCcHHHHHHh---ccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEcCCCCeEEecccccchhccCCc-
Confidence 344444421 222357888888888887765 125899999998764221
Q ss_pred cccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHhHhh-hcCChhHHHHHH
Q 042825 525 HSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQKM-HKNHDTFQMAID 603 (631)
Q Consensus 525 ~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~~~~-~~~~~~l~~~id 603 (631)
.......|+..|+|||+..+..++.++|||||||++|||++|+.||.................... ...+.++.+++.
T Consensus 157 -~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 235 (257)
T cd08225 157 -ELAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNLHQLVLKICQGYFAPISPNFSRDLRSLIS 235 (257)
T ss_pred -ccccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhcccCCCCCCCCCHHHHHHHH
Confidence 122334689999999999888899999999999999999999999975432211111111111111 112467999999
Q ss_pred hhcCCChhhHHhHHHHHH
Q 042825 604 KTIQLDEENLANVSTVAE 621 (631)
Q Consensus 604 ~~L~~d~~~r~~~~~vl~ 621 (631)
+|+..+|++|+++.++++
T Consensus 236 ~~l~~~p~~Rpt~~~ll~ 253 (257)
T cd08225 236 QLFKVSPRDRPSITSILK 253 (257)
T ss_pred HHhccChhhCcCHHHHhh
Confidence 999999999999998875
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. |
| >cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk | Back alignment and domain information |
|---|
Probab=99.82 E-value=4.7e-20 Score=186.23 Aligned_cols=200 Identities=24% Similarity=0.367 Sum_probs=146.3
Q ss_pred hhcCCcccceeecCCCceEEEEEEecCCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc----------------------
Q 042825 415 NATNNFSEENRLGRGGVGTVYKGELKDGTEVGVKRMELGSVTEQGIAQFESEITVLTK---------------------- 472 (631)
Q Consensus 415 ~~t~~f~~~~~iG~G~fg~Vyk~~~~~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~---------------------- 472 (631)
+...+|...+.||+|+||.||+|+..++..+|+|.+.... .....++.+|++++.+
T Consensus 3 ~~~~~y~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~--~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 80 (261)
T cd05148 3 RPREEFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDD--LLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYII 80 (261)
T ss_pred CcHHHHHHhhhhccCCCccEEEeEecCCCcEEEEeccccc--hhhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEE
Confidence 3456788899999999999999998889999999987543 2245678888888766
Q ss_pred ------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCC
Q 042825 473 ------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPEN 522 (631)
Q Consensus 473 ------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~ 522 (631)
++|.+++.. .....+++.+...++.+++.+ ..+||+|||+++.....
T Consensus 81 ~e~~~~~~L~~~~~~---~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~ 157 (261)
T cd05148 81 TELMEKGSLLAFLRS---PEGQVLPVASLIDMACQVAEGMAYLEEQNSIHRDLAARNILVGEDLVCKVADFGLARLIKED 157 (261)
T ss_pred EeecccCCHHHHHhc---CCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccCcceEEEcCCceEEEccccchhhcCCc
Confidence 466666642 223457888888888777665 35789999999876422
Q ss_pred CccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChHHHHHHHHHhH--hhhcCChhHH
Q 042825 523 GKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT-GRKVVDATHSDPEYIIHLATWFQ--KMHKNHDTFQ 599 (631)
Q Consensus 523 ~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~Ellt-G~~P~~~~~~~~~~~~~l~~~~~--~~~~~~~~l~ 599 (631)
. .......++..|+|||++....++.++||||||+++|||++ |+.||......+.. ..+..-.+ .....++.+.
T Consensus 158 ~--~~~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 234 (261)
T cd05148 158 V--YLSSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHEVY-DQITAGYRMPCPAKCPQEIY 234 (261)
T ss_pred c--ccccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHHHHH-HHHHhCCcCCCCCCCCHHHH
Confidence 1 11223456778999999988889999999999999999998 89999764422111 11111000 1122346789
Q ss_pred HHHHhhcCCChhhHHhHHHHHHH
Q 042825 600 MAIDKTIQLDEENLANVSTVAEL 622 (631)
Q Consensus 600 ~~id~~L~~d~~~r~~~~~vl~l 622 (631)
+++.+|+..+|.+||++.++++.
T Consensus 235 ~~i~~~l~~~p~~Rpt~~~l~~~ 257 (261)
T cd05148 235 KIMLECWAAEPEDRPSFKALREE 257 (261)
T ss_pred HHHHHHcCCCchhCcCHHHHHHH
Confidence 99999999999999999988764
|
Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom |
| >cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.7e-19 Score=190.13 Aligned_cols=209 Identities=21% Similarity=0.283 Sum_probs=144.0
Q ss_pred CCcccceeecCCCceEEEEEEe------cCCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc-------------------
Q 042825 418 NNFSEENRLGRGGVGTVYKGEL------KDGTEVGVKRMELGSVTEQGIAQFESEITVLTK------------------- 472 (631)
Q Consensus 418 ~~f~~~~~iG~G~fg~Vyk~~~------~~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~------------------- 472 (631)
++|+..+.||+|+||.||+|+. .+++.||||+++... .......+.+|++++.+
T Consensus 7 ~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~ 85 (343)
T cd05103 7 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA-THSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG 85 (343)
T ss_pred hHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCC-ChHHHHHHHHHHHHHHhccCCccHhhhcceeecCCC
Confidence 4688899999999999999973 247899999997543 23345667888887755
Q ss_pred -----------CChhHHhHhhhhc--------------------------------------------------------
Q 042825 473 -----------GTLGRHLFNWEEE-------------------------------------------------------- 485 (631)
Q Consensus 473 -----------gsL~~~L~~~~~~-------------------------------------------------------- 485 (631)
|+|.++++.....
T Consensus 86 ~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (343)
T cd05103 86 PLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEE 165 (343)
T ss_pred ceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchhhh
Confidence 4555554321000
Q ss_pred ------CCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCCccccccccccCc
Q 042825 486 ------GLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENGKHSILTKVAGTF 535 (631)
Q Consensus 486 ------~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~~~~~~~~~~gt~ 535 (631)
....++|.+...++.++++| +.+||+|||+++...............++.
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~ 245 (343)
T cd05103 166 AEQEDLYKKVLTLEDLICYSFQVAKGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPL 245 (343)
T ss_pred hhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCccCeEEEcCCCcEEEEecccccccccCcchhhcCCCCCCc
Confidence 01236777888888888775 457899999998753222111222334667
Q ss_pred ccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChHHHHHHHHHhH--hhhcCChhHHHHHHhhcCCChhh
Q 042825 536 GYLAPEYIVTGRITAKVDVYSFGMILMDLIT-GRKVVDATHSDPEYIIHLATWFQ--KMHKNHDTFQMAIDKTIQLDEEN 612 (631)
Q Consensus 536 ~Y~aPE~~~~~~~~~k~DVwS~GvvL~Ellt-G~~P~~~~~~~~~~~~~l~~~~~--~~~~~~~~l~~~id~~L~~d~~~ 612 (631)
.|+|||++.+..++.++|||||||++|||++ |..||............+..-.. .....+.++.+++..++..+|++
T Consensus 246 ~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~cl~~~p~~ 325 (343)
T cd05103 246 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQ 325 (343)
T ss_pred ceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccHHHHHHHhccCCCCCCCCCCHHHHHHHHHHccCChhh
Confidence 8999999988889999999999999999997 99999765433221111111000 01112357889999999999999
Q ss_pred HHhHHHHHHHHHhhh
Q 042825 613 LANVSTVAELGDHCC 627 (631)
Q Consensus 613 r~~~~~vl~lal~C~ 627 (631)
||++.++++..-...
T Consensus 326 Rps~~eil~~l~~~~ 340 (343)
T cd05103 326 RPTFSELVEHLGNLL 340 (343)
T ss_pred CcCHHHHHHHHHHHH
Confidence 999999887655443
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp |
| >cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8 | Back alignment and domain information |
|---|
Probab=99.82 E-value=2e-19 Score=180.95 Aligned_cols=197 Identities=20% Similarity=0.297 Sum_probs=144.2
Q ss_pred CcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc-------------------------
Q 042825 419 NFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK------------------------- 472 (631)
Q Consensus 419 ~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~------------------------- 472 (631)
+|+..+.||+|+||.||++... +++.+|||++..........+.+.+|++++++
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVMEY 80 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEec
Confidence 4778899999999999999865 58899999998765555567789999988875
Q ss_pred ---CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC-------------------------CCcEEEeeccccccCCCCc
Q 042825 473 ---GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG-------------------------DDMRVADFGLVRLVPENGK 524 (631)
Q Consensus 473 ---gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g-------------------------~~~kl~DFGla~~~~~~~~ 524 (631)
++|.+++.. .....+++.....++.+++++ ..+||+|||+++......
T Consensus 81 ~~~~~L~~~~~~---~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~- 156 (256)
T cd08220 81 APGGTLAEYIQK---RCNSLLDEDTILHFFVQILLALHHVHTKLILHRDLKTQNILLDKHKMVVKIGDFGISKILSSKS- 156 (256)
T ss_pred CCCCCHHHHHHH---hcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEccCCCceecCCCc-
Confidence 455555532 123457788878777777764 236899999998764221
Q ss_pred cccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHhH-hhhcCChhHHHHHH
Q 042825 525 HSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQ-KMHKNHDTFQMAID 603 (631)
Q Consensus 525 ~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~~-~~~~~~~~l~~~id 603 (631)
......|+..|+|||.+.+..++.++|||||||++|||++|+.||...............-.. .....+.++.+++.
T Consensus 157 --~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 234 (256)
T cd08220 157 --KAYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLPALVLKIMSGTFAPISDRYSPDLRQLIL 234 (256)
T ss_pred --cccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCchHHHHHHHHhcCCCCCCCCcCHHHHHHHH
Confidence 123356889999999998888999999999999999999999999765332111111100000 01112467999999
Q ss_pred hhcCCChhhHHhHHHHHH
Q 042825 604 KTIQLDEENLANVSTVAE 621 (631)
Q Consensus 604 ~~L~~d~~~r~~~~~vl~ 621 (631)
.|+..+|.+|+++.+++.
T Consensus 235 ~~l~~~p~~Rpt~~~ll~ 252 (256)
T cd08220 235 SMLNLDPSKRPQLSQIMA 252 (256)
T ss_pred HHccCChhhCCCHHHHhh
Confidence 999999999999998875
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with |
| >cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2 | Back alignment and domain information |
|---|
Probab=99.82 E-value=5.8e-20 Score=188.07 Aligned_cols=198 Identities=17% Similarity=0.239 Sum_probs=139.1
Q ss_pred CcccceeecCCCceEEEEEEec------CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc--------------------
Q 042825 419 NFSEENRLGRGGVGTVYKGELK------DGTEVGVKRMELGSVTEQGIAQFESEITVLTK-------------------- 472 (631)
Q Consensus 419 ~f~~~~~iG~G~fg~Vyk~~~~------~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~-------------------- 472 (631)
+|...+.||+|+||.||+|+.. .++.||+|++.... .....+.|.+|+.++.+
T Consensus 6 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~ 84 (283)
T cd05091 6 TVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKA-EGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQPLS 84 (283)
T ss_pred HHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCC-CHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCceE
Confidence 4566789999999999999864 25789999987543 23345678888887765
Q ss_pred --------CChhHHhHhhh-----------hcCCCCCCHHHHHHHHHHhhcC------------------------CCcE
Q 042825 473 --------GTLGRHLFNWE-----------EEGLEPLEWNTRLNIALDVARG------------------------DDMR 509 (631)
Q Consensus 473 --------gsL~~~L~~~~-----------~~~~~~L~~~~~~~I~~~ia~g------------------------~~~k 509 (631)
+++.+++.... ......+++.....++.+++.| ..+|
T Consensus 85 ~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~gi~H~dlkp~Nil~~~~~~~k 164 (283)
T cd05091 85 MIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHHVVHKDLATRNVLVFDKLNVK 164 (283)
T ss_pred EEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcCccccccchhheEecCCCceE
Confidence 44444443110 0012347787788888877765 3578
Q ss_pred EEeeccccccCCCCccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChHHHHHHHHHh
Q 042825 510 VADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT-GRKVVDATHSDPEYIIHLATWF 588 (631)
Q Consensus 510 l~DFGla~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~Ellt-G~~P~~~~~~~~~~~~~l~~~~ 588 (631)
|+|||+++.+.............+++.|+|||++....++.++|||||||++|||++ |..||.+.... . +....
T Consensus 165 l~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~--~---~~~~i 239 (283)
T cd05091 165 ISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQ--D---VIEMI 239 (283)
T ss_pred ecccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCHH--H---HHHHH
Confidence 999999987642222222234456789999999988889999999999999999998 88888754322 1 11111
Q ss_pred Hhh------hcCChhHHHHHHhhcCCChhhHHhHHHHHHH
Q 042825 589 QKM------HKNHDTFQMAIDKTIQLDEENLANVSTVAEL 622 (631)
Q Consensus 589 ~~~------~~~~~~l~~~id~~L~~d~~~r~~~~~vl~l 622 (631)
... ...+..+.+++..|++.+|.+||++.+++..
T Consensus 240 ~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~ 279 (283)
T cd05091 240 RNRQVLPCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSR 279 (283)
T ss_pred HcCCcCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHH
Confidence 111 1124578999999999999999999988764
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly |
| >cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.82 E-value=7.8e-20 Score=186.34 Aligned_cols=204 Identities=22% Similarity=0.325 Sum_probs=145.6
Q ss_pred cCCcccceeecCCCceEEEEEEecC------CcEEEEEEEecCCCCHHHHHHHHHHHHHHhc------------------
Q 042825 417 TNNFSEENRLGRGGVGTVYKGELKD------GTEVGVKRMELGSVTEQGIAQFESEITVLTK------------------ 472 (631)
Q Consensus 417 t~~f~~~~~iG~G~fg~Vyk~~~~~------g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~------------------ 472 (631)
.++|...+.||+|+||.||+|.... +..||+|.+.... .......+.+|+.++..
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~-~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~ 83 (277)
T cd05032 5 REKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENA-SMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQP 83 (277)
T ss_pred hHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCcc-CHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCCC
Confidence 3578888999999999999998652 4689999986543 23345678889888765
Q ss_pred ----------CChhHHhHhhhhc-----CCCCCCHHHHHHHHHHhhcC------------------------CCcEEEee
Q 042825 473 ----------GTLGRHLFNWEEE-----GLEPLEWNTRLNIALDVARG------------------------DDMRVADF 513 (631)
Q Consensus 473 ----------gsL~~~L~~~~~~-----~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DF 513 (631)
|+|.+++...... ....+.|.....++.+++.| +.+||+||
T Consensus 84 ~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~di~p~nill~~~~~~kl~df 163 (277)
T cd05032 84 TLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKKFVHRDLAARNCMVAEDLTVKIGDF 163 (277)
T ss_pred cEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccChheEEEcCCCCEEECCc
Confidence 6777776542211 12347888888888887765 45789999
Q ss_pred ccccccCCCCccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChHHHHHHHH-H-hHh
Q 042825 514 GLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT-GRKVVDATHSDPEYIIHLAT-W-FQK 590 (631)
Q Consensus 514 Gla~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~Ellt-G~~P~~~~~~~~~~~~~l~~-~-~~~ 590 (631)
|+++.+.............++..|+|||.+....++.++|||||||++||++| |+.||....... ....+.. . ...
T Consensus 164 g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~-~~~~~~~~~~~~~ 242 (277)
T cd05032 164 GMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNEE-VLKFVIDGGHLDL 242 (277)
T ss_pred ccchhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCHHH-HHHHHhcCCCCCC
Confidence 99987643222222234457889999999988889999999999999999998 999997543221 1111111 0 001
Q ss_pred hhcCChhHHHHHHhhcCCChhhHHhHHHHHHH
Q 042825 591 MHKNHDTFQMAIDKTIQLDEENLANVSTVAEL 622 (631)
Q Consensus 591 ~~~~~~~l~~~id~~L~~d~~~r~~~~~vl~l 622 (631)
....+.++.+++.+|+..+|++|+++.++++.
T Consensus 243 ~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~ 274 (277)
T cd05032 243 PENCPDKLLELMRMCWQYNPKMRPTFLEIVSS 274 (277)
T ss_pred CCCCCHHHHHHHHHHcCCChhhCCCHHHHHHH
Confidence 11224678999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological |
| >cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.7e-19 Score=193.46 Aligned_cols=209 Identities=20% Similarity=0.286 Sum_probs=146.5
Q ss_pred hcCCcccceeecCCCceEEEEEEec------CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc-----------------
Q 042825 416 ATNNFSEENRLGRGGVGTVYKGELK------DGTEVGVKRMELGSVTEQGIAQFESEITVLTK----------------- 472 (631)
Q Consensus 416 ~t~~f~~~~~iG~G~fg~Vyk~~~~------~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~----------------- 472 (631)
..++|...+.||+|+||.||+|++. .+..||||+++... .....+.+.+|++++.+
T Consensus 35 ~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~-~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~~ 113 (401)
T cd05107 35 PRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTA-RSSEKQALMSELKIMSHLGPHLNIVNLLGACTKG 113 (401)
T ss_pred cHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCC-ChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEccC
Confidence 3446777899999999999999864 24689999997543 23344578899988764
Q ss_pred ------------CChhHHhHhhhh--------------------------------------------------------
Q 042825 473 ------------GTLGRHLFNWEE-------------------------------------------------------- 484 (631)
Q Consensus 473 ------------gsL~~~L~~~~~-------------------------------------------------------- 484 (631)
|+|.++++....
T Consensus 114 ~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (401)
T cd05107 114 GPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVPMQ 193 (401)
T ss_pred CCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccchh
Confidence 777777753210
Q ss_pred -------------------------------------cCCCCCCHHHHHHHHHHhhcC----------------------
Q 042825 485 -------------------------------------EGLEPLEWNTRLNIALDVARG---------------------- 505 (631)
Q Consensus 485 -------------------------------------~~~~~L~~~~~~~I~~~ia~g---------------------- 505 (631)
.....++|.....|+.++++|
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrdlkp~NiLl~ 273 (401)
T cd05107 194 DMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASKNCVHRDLAARNVLIC 273 (401)
T ss_pred cchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCcCcccCCcceEEEe
Confidence 011246777778888887765
Q ss_pred --CCcEEEeeccccccCCCCccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChHHHH
Q 042825 506 --DDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT-GRKVVDATHSDPEYII 582 (631)
Q Consensus 506 --~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~Ellt-G~~P~~~~~~~~~~~~ 582 (631)
..+||+|||+++...............++..|+|||++....++.++|||||||++|||++ |+.||......+....
T Consensus 274 ~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~~~~~~ 353 (401)
T cd05107 274 EGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPMNEQFYN 353 (401)
T ss_pred CCCEEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCchHHHHH
Confidence 3468999999986532221112233457889999999988889999999999999999998 8999875433221111
Q ss_pred HHHH-Hh-HhhhcCChhHHHHHHhhcCCChhhHHhHHHHHHHHHh
Q 042825 583 HLAT-WF-QKMHKNHDTFQMAIDKTIQLDEENLANVSTVAELGDH 625 (631)
Q Consensus 583 ~l~~-~~-~~~~~~~~~l~~~id~~L~~d~~~r~~~~~vl~lal~ 625 (631)
.+.. +. ......+.++.+++.+|+..+|.+||++.++++.-..
T Consensus 354 ~~~~~~~~~~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~L~~ 398 (401)
T cd05107 354 AIKRGYRMAKPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHLVGD 398 (401)
T ss_pred HHHcCCCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHH
Confidence 1111 00 0011224688999999999999999999999876443
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D |
| >cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1 | Back alignment and domain information |
|---|
Probab=99.82 E-value=2.9e-20 Score=194.54 Aligned_cols=187 Identities=19% Similarity=0.237 Sum_probs=125.2
Q ss_pred eeecCCCceEEEEEEec-CCcEEEEEEEecCCCC-HHHHHHHHHHHHHH-hc----------------------------
Q 042825 424 NRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVT-EQGIAQFESEITVL-TK---------------------------- 472 (631)
Q Consensus 424 ~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~-~~~~~~~~~Ei~~l-~~---------------------------- 472 (631)
+.||+|+||+||+|+.. +++.||+|++...... ......+..|...+ ..
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYING 80 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCC
Confidence 46999999999999976 5789999999753221 12233445554432 21
Q ss_pred CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCCccccc
Q 042825 473 GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENGKHSIL 528 (631)
Q Consensus 473 gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~~~~~~ 528 (631)
|+|.+++.. ...+.......++.+++.| +.+||+|||+++..... ....
T Consensus 81 ~~L~~~~~~-----~~~~~~~~~~~~~~qi~~~L~~lH~~giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~--~~~~ 153 (325)
T cd05602 81 GELFYHLQR-----ERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEH--NGTT 153 (325)
T ss_pred CcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEEccCCCCcccccC--CCCc
Confidence 445444421 1234444555566666554 46789999999864211 1223
Q ss_pred cccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHhHh-hhcCChhHHHHHHhhcC
Q 042825 529 TKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQK-MHKNHDTFQMAIDKTIQ 607 (631)
Q Consensus 529 ~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~~~-~~~~~~~l~~~id~~L~ 607 (631)
...+||+.|+|||++.+..++.++||||+||++|||++|+.||......+ ....+...... ....+..+.+++.++|+
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~li~~~l~ 232 (325)
T cd05602 154 STFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAE-MYDNILNKPLQLKPNITNSARHLLEGLLQ 232 (325)
T ss_pred ccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHHH-HHHHHHhCCcCCCCCCCHHHHHHHHHHcc
Confidence 45679999999999999899999999999999999999999998543221 11112111111 11235678999999999
Q ss_pred CChhhHHhHHH
Q 042825 608 LDEENLANVST 618 (631)
Q Consensus 608 ~d~~~r~~~~~ 618 (631)
.+|.+|+++.+
T Consensus 233 ~~p~~R~~~~~ 243 (325)
T cd05602 233 KDRTKRLGAKD 243 (325)
T ss_pred cCHHHCCCCCC
Confidence 99999987653
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt |
| >cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome | Back alignment and domain information |
|---|
Probab=99.82 E-value=7.9e-20 Score=184.41 Aligned_cols=195 Identities=19% Similarity=0.313 Sum_probs=142.3
Q ss_pred CcccceeecCCCceEEEEEEecCCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc--------------------------
Q 042825 419 NFSEENRLGRGGVGTVYKGELKDGTEVGVKRMELGSVTEQGIAQFESEITVLTK-------------------------- 472 (631)
Q Consensus 419 ~f~~~~~iG~G~fg~Vyk~~~~~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~-------------------------- 472 (631)
+|...+.||+|+||+||+|...++..+|||.+..... ...+|.+|+.++.+
T Consensus 5 ~~~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~~---~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 81 (256)
T cd05113 5 DLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM---SEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEYM 81 (256)
T ss_pred HeEEeeEecCcccceEEEEEecCCCcEEEEEcCCCcc---cHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEEcC
Confidence 5677889999999999999987777899999875433 23568889888876
Q ss_pred --CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCCccc
Q 042825 473 --GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENGKHS 526 (631)
Q Consensus 473 --gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~~~~ 526 (631)
|+|.+++.. ....+.+.....++.+++.| +.+||+|||.++...... ..
T Consensus 82 ~~~~l~~~i~~----~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~-~~ 156 (256)
T cd05113 82 SNGCLLNYLRE----HGKRFQPSQLLEMCKDVCEGMAYLESKQFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDE-YT 156 (256)
T ss_pred CCCcHHHHHHh----cCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCCCEEECCCccceecCCCc-ee
Confidence 445554432 22367888889988888876 457899999998764221 11
Q ss_pred cccccccCcccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChHHHHHHHHHhH--hhhcCChhHHHHHH
Q 042825 527 ILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT-GRKVVDATHSDPEYIIHLATWFQ--KMHKNHDTFQMAID 603 (631)
Q Consensus 527 ~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~Ellt-G~~P~~~~~~~~~~~~~l~~~~~--~~~~~~~~l~~~id 603 (631)
......++..|+|||+.....++.++|||||||++|||++ |+.||....... ....+....+ .....+..+.+++.
T Consensus 157 ~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~li~ 235 (256)
T cd05113 157 SSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSE-TVEKVSQGLRLYRPHLASEKVYAIMY 235 (256)
T ss_pred ecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHHH-HHHHHhcCCCCCCCCCCCHHHHHHHH
Confidence 1223346678999999988889999999999999999999 999997543221 1112211111 11122467899999
Q ss_pred hhcCCChhhHHhHHHHHHH
Q 042825 604 KTIQLDEENLANVSTVAEL 622 (631)
Q Consensus 604 ~~L~~d~~~r~~~~~vl~l 622 (631)
.|+..+|.+||++.++++.
T Consensus 236 ~cl~~~p~~Rp~~~~ll~~ 254 (256)
T cd05113 236 SCWHEKAEERPTFQQLLSS 254 (256)
T ss_pred HHcCCCcccCCCHHHHHHh
Confidence 9999999999999988763
|
Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds |
| >cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.4e-19 Score=187.38 Aligned_cols=203 Identities=20% Similarity=0.288 Sum_probs=144.0
Q ss_pred cCCcccceeecCCCceEEEEEEec------CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc------------------
Q 042825 417 TNNFSEENRLGRGGVGTVYKGELK------DGTEVGVKRMELGSVTEQGIAQFESEITVLTK------------------ 472 (631)
Q Consensus 417 t~~f~~~~~iG~G~fg~Vyk~~~~------~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~------------------ 472 (631)
.++|...+.||+|+||.||++... .+..||||+++... .....+.+.+|++++++
T Consensus 34 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 112 (302)
T cd05055 34 RNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTA-HSSEREALMSELKIMSHLGNHENIVNLLGACTIGG 112 (302)
T ss_pred HHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccC-ChHHHHHHHHHHHHHHhccCCCCcceEEEEEecCC
Confidence 356888999999999999999742 35589999887543 23345678899988865
Q ss_pred -----------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeecccc
Q 042825 473 -----------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVR 517 (631)
Q Consensus 473 -----------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~ 517 (631)
|+|.+++.. .....+++.+...++.+++.| ..++++|||+++
T Consensus 113 ~~~lv~e~~~~~~L~~~i~~---~~~~~l~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~l~dfg~~~ 189 (302)
T cd05055 113 PILVITEYCCYGDLLNFLRR---KRESFLTLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNVLLTHGKIVKICDFGLAR 189 (302)
T ss_pred ceEEEEEcCCCCcHHHHHHh---CCCCCCCHHHHHHHHHHHHHHHHHHHHCCeehhhhccceEEEcCCCeEEECCCcccc
Confidence 455555532 122347888888888887765 346899999998
Q ss_pred ccCCCCccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChHHHHHHHHHhHh--hhcC
Q 042825 518 LVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT-GRKVVDATHSDPEYIIHLATWFQK--MHKN 594 (631)
Q Consensus 518 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~Ellt-G~~P~~~~~~~~~~~~~l~~~~~~--~~~~ 594 (631)
...............++..|+|||++....++.++|||||||++|||++ |+.||......+.....+..-... ....
T Consensus 190 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (302)
T cd05055 190 DIMNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDSKFYKLIKEGYRMAQPEHA 269 (302)
T ss_pred cccCCCceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchHHHHHHHHcCCcCCCCCCC
Confidence 6642221112223456788999999988889999999999999999998 999997654432211111110000 0122
Q ss_pred ChhHHHHHHhhcCCChhhHHhHHHHHHHH
Q 042825 595 HDTFQMAIDKTIQLDEENLANVSTVAELG 623 (631)
Q Consensus 595 ~~~l~~~id~~L~~d~~~r~~~~~vl~la 623 (631)
+.++.+++.+|+..+|++|+++.++++..
T Consensus 270 ~~~~~~li~~cl~~~p~~Rpt~~ell~~l 298 (302)
T cd05055 270 PAEIYDIMKTCWDADPLKRPTFKQIVQLI 298 (302)
T ss_pred CHHHHHHHHHHcCCCchhCcCHHHHHHHH
Confidence 46889999999999999999999988754
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept |
| >cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3 | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.9e-19 Score=184.21 Aligned_cols=197 Identities=21% Similarity=0.323 Sum_probs=138.2
Q ss_pred CcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc-------------------------
Q 042825 419 NFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK------------------------- 472 (631)
Q Consensus 419 ~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~------------------------- 472 (631)
+|+..+.||+|+||.||+|+.. +|+.||||++............+.+|++++.+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF 80 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEeec
Confidence 4788899999999999999875 58999999987544333344578889988876
Q ss_pred --CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCCccc
Q 042825 473 --GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENGKHS 526 (631)
Q Consensus 473 --gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~~~~ 526 (631)
+++..++.. .....+++.....++.+++.| +.+||+|||+++...... .
T Consensus 81 ~~~~l~~~~~~---~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~--~ 155 (284)
T cd07860 81 LHQDLKKFMDA---SPLSGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV--R 155 (284)
T ss_pred cccCHHHHHHh---CCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEeeccchhhcccCc--c
Confidence 222222211 123457888888888887765 467899999998653221 1
Q ss_pred cccccccCcccccccccccCC-CCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHH------------------
Q 042825 527 ILTKVAGTFGYLAPEYIVTGR-ITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATW------------------ 587 (631)
Q Consensus 527 ~~~~~~gt~~Y~aPE~~~~~~-~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~------------------ 587 (631)
......++..|+|||++.+.. ++.++|||||||++|||+||+.||....... ....+..+
T Consensus 156 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (284)
T cd07860 156 TYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID-QLFRIFRTLGTPDEVVWPGVTSLPDY 234 (284)
T ss_pred ccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHH-HHHHHHHHhCCCChhhhhhhhHHHHH
Confidence 223345788999999887654 6889999999999999999999997543211 11111110
Q ss_pred -------hH----h-hhcCChhHHHHHHhhcCCChhhHHhHHHHHH
Q 042825 588 -------FQ----K-MHKNHDTFQMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 588 -------~~----~-~~~~~~~l~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
.. . ....+.++.++|.+++..||.+|+++.++++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~ 280 (284)
T cd07860 235 KPSFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALA 280 (284)
T ss_pred HhhcccccccCHHHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhc
Confidence 00 0 0112456789999999999999999988764
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex |
| >cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1 | Back alignment and domain information |
|---|
Probab=99.82 E-value=4.7e-20 Score=196.44 Aligned_cols=203 Identities=18% Similarity=0.196 Sum_probs=135.8
Q ss_pred HHHHHhhcCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCC-CHHHHHHHHHHHHHHhc---------------
Q 042825 410 IQVLRNATNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSV-TEQGIAQFESEITVLTK--------------- 472 (631)
Q Consensus 410 ~~~l~~~t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~-~~~~~~~~~~Ei~~l~~--------------- 472 (631)
+.++....++|...+.||+|+||.||+++.+ +++.||+|++..... .....+.+.+|+.++..
T Consensus 35 ~~~~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~ 114 (371)
T cd05622 35 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQD 114 (371)
T ss_pred HhhcCcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEc
Confidence 3445566789999999999999999999976 588999999865322 22234557778777754
Q ss_pred -------------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeecc
Q 042825 473 -------------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGL 515 (631)
Q Consensus 473 -------------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGl 515 (631)
|+|.+++.. ..+.......++.+++.| +.+||+|||+
T Consensus 115 ~~~~~lv~Ey~~gg~L~~~~~~------~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NIll~~~~~ikL~DfG~ 188 (371)
T cd05622 115 DRYLYMVMEYMPGGDLVNLMSN------YDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGT 188 (371)
T ss_pred CCEEEEEEcCCCCCcHHHHHHh------cCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHEEECCCCCEEEEeCCc
Confidence 555555532 124444444455555443 5689999999
Q ss_pred ccccCCCCccccccccccCcccccccccccC----CCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHh---
Q 042825 516 VRLVPENGKHSILTKVAGTFGYLAPEYIVTG----RITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWF--- 588 (631)
Q Consensus 516 a~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~----~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~--- 588 (631)
++.+.... .......+||+.|+|||++... .++.++|||||||++|||++|+.||....... ....+....
T Consensus 189 a~~~~~~~-~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~-~~~~i~~~~~~~ 266 (371)
T cd05622 189 CMKMNKEG-MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVG-TYSKIMNHKNSL 266 (371)
T ss_pred eeEcCcCC-cccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHHH-HHHHHHcCCCcc
Confidence 98764221 1123456799999999998654 37899999999999999999999998643221 111111100
Q ss_pred --HhhhcCChhHHHHHHhhcCCChhh---HHhHHHHHH
Q 042825 589 --QKMHKNHDTFQMAIDKTIQLDEEN---LANVSTVAE 621 (631)
Q Consensus 589 --~~~~~~~~~l~~~id~~L~~d~~~---r~~~~~vl~ 621 (631)
......+..++++|..+|. ++.. |+++.++++
T Consensus 267 ~~~~~~~~s~~~~~li~~~L~-~~~~r~~r~~~~ei~~ 303 (371)
T cd05622 267 TFPDDNDISKEAKNLICAFLT-DREVRLGRNGVEEIKR 303 (371)
T ss_pred cCCCcCCCCHHHHHHHHHHcC-ChhhhcCCCCHHHHhc
Confidence 0011235678999999997 4444 567776655
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an |
| >cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha | Back alignment and domain information |
|---|
Probab=99.82 E-value=3.9e-20 Score=194.16 Aligned_cols=198 Identities=20% Similarity=0.245 Sum_probs=132.0
Q ss_pred CCcccceeecCCCceEEEEEEecC-CcEEEEEEEecCCC-CHHHHHHHHHHHHHHhc-----------------------
Q 042825 418 NNFSEENRLGRGGVGTVYKGELKD-GTEVGVKRMELGSV-TEQGIAQFESEITVLTK----------------------- 472 (631)
Q Consensus 418 ~~f~~~~~iG~G~fg~Vyk~~~~~-g~~vAvK~l~~~~~-~~~~~~~~~~Ei~~l~~----------------------- 472 (631)
++|...+.||+|+||+||+++.+. ++.+|+|++..... .......+..|+.++..
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVM 80 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEE
Confidence 478889999999999999999764 78899999864321 12233457778777654
Q ss_pred -----CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCC
Q 042825 473 -----GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENG 523 (631)
Q Consensus 473 -----gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~ 523 (631)
|+|.+++.. ....+.+.....++.+++.+ +.+||+|||+++......
T Consensus 81 ey~~~g~L~~~l~~----~~~~l~~~~~~~~~~qi~~al~~lH~~~iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~~~ 156 (332)
T cd05623 81 DYYVGGDLLTLLSK----FEDRLPEDMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDG 156 (332)
T ss_pred eccCCCcHHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCCCEEEeecchheecccCC
Confidence 666666642 12346666666666555544 467899999997653222
Q ss_pred ccccccccccCcccccccccc-----cCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHH------hHhhh
Q 042825 524 KHSILTKVAGTFGYLAPEYIV-----TGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATW------FQKMH 592 (631)
Q Consensus 524 ~~~~~~~~~gt~~Y~aPE~~~-----~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~------~~~~~ 592 (631)
........||+.|+|||++. ...++.++|||||||++|||++|+.||......+ ....+... .....
T Consensus 157 -~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~~~-~~~~i~~~~~~~~~p~~~~ 234 (332)
T cd05623 157 -TVQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLVE-TYGKIMNHKERFQFPAQVT 234 (332)
T ss_pred -cceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCHHH-HHHHHhCCCccccCCCccc
Confidence 12223457999999999986 3468899999999999999999999998643221 11111111 01111
Q ss_pred cCChhHHHHHHhhcCCChhh--HHhHHHHHH
Q 042825 593 KNHDTFQMAIDKTIQLDEEN--LANVSTVAE 621 (631)
Q Consensus 593 ~~~~~l~~~id~~L~~d~~~--r~~~~~vl~ 621 (631)
..+.++.+++.+++..++.. |.++.++++
T Consensus 235 ~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~ 265 (332)
T cd05623 235 DVSEDAKDLIRRLICSREHRLGQNGIEDFKQ 265 (332)
T ss_pred cCCHHHHHHHHHHccChhhhcCCCCHHHHhC
Confidence 23567899999998654332 456666543
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw |
| >cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1 | Back alignment and domain information |
|---|
Probab=99.82 E-value=4.2e-20 Score=197.79 Aligned_cols=195 Identities=18% Similarity=0.251 Sum_probs=133.2
Q ss_pred CcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCC-CHHHHHHHHHHHHHHhc------------------------
Q 042825 419 NFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSV-TEQGIAQFESEITVLTK------------------------ 472 (631)
Q Consensus 419 ~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~-~~~~~~~~~~Ei~~l~~------------------------ 472 (631)
.|...+.||+|+||+||+|+.. +++.||+|++..... .....+.+.+|++++.+
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E 81 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMD 81 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEe
Confidence 5888999999999999999865 588999999975432 22345678889888865
Q ss_pred ----CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCCc
Q 042825 473 ----GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENGK 524 (631)
Q Consensus 473 ----gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~~ 524 (631)
|+|.+++.. ...+.......++.+++.| +.+||+|||+++.......
T Consensus 82 ~~~gg~L~~~l~~-----~~~~~e~~~~~~~~qi~~al~~lH~~~ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~~~ 156 (382)
T cd05625 82 YIPGGDMMSLLIR-----MGIFPEDLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHD 156 (382)
T ss_pred CCCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEEeECCCCcccccccc
Confidence 556655532 1234444444444444433 5689999999853210000
Q ss_pred ---------------------------------------------cccccccccCcccccccccccCCCCchhhHHHHHH
Q 042825 525 ---------------------------------------------HSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGM 559 (631)
Q Consensus 525 ---------------------------------------------~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~Gv 559 (631)
.......+||+.|+|||++.+..++.++||||+||
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGv 236 (382)
T cd05625 157 SKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGV 236 (382)
T ss_pred ccccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEechH
Confidence 00112357999999999999889999999999999
Q ss_pred HHHHHHcCCCCCCCCCCChHHHHHHHHHhHhh-----hcCChhHHHHHHhhcCCChhhHHh---HHHHH
Q 042825 560 ILMDLITGRKVVDATHSDPEYIIHLATWFQKM-----HKNHDTFQMAIDKTIQLDEENLAN---VSTVA 620 (631)
Q Consensus 560 vL~ElltG~~P~~~~~~~~~~~~~l~~~~~~~-----~~~~~~l~~~id~~L~~d~~~r~~---~~~vl 620 (631)
++|||++|+.||......+ ....+..|.... ...+++..++|.+++ .+|.+|.+ +.+++
T Consensus 237 il~elltG~~Pf~~~~~~~-~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~ 303 (382)
T cd05625 237 ILYEMLVGQPPFLAQTPLE-TQMKVINWQTSLHIPPQAKLSPEASDLIIKLC-RGPEDRLGKNGADEIK 303 (382)
T ss_pred HHHHHHhCCCCCCCCCHHH-HHHHHHccCCCcCCCCcccCCHHHHHHHHHHc-cCHhHcCCCCCHHHHh
Confidence 9999999999998654322 222333332211 123567889998876 58998876 66654
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an |
| >cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase | Back alignment and domain information |
|---|
Probab=99.82 E-value=9.6e-20 Score=187.02 Aligned_cols=204 Identities=21% Similarity=0.275 Sum_probs=143.9
Q ss_pred cCCcccceeecCCCceEEEEEEec------CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc------------------
Q 042825 417 TNNFSEENRLGRGGVGTVYKGELK------DGTEVGVKRMELGSVTEQGIAQFESEITVLTK------------------ 472 (631)
Q Consensus 417 t~~f~~~~~iG~G~fg~Vyk~~~~------~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~------------------ 472 (631)
.++|+..+.||+|+||.||++..+ ++..||+|++.... ......+|.+|++++.+
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~~ 82 (288)
T cd05050 4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEA-SADMQADFQREAALMAEFDHPNIVKLLGVCAVGKP 82 (288)
T ss_pred hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCc-CHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCc
Confidence 467888999999999999999864 46789999987543 33455778899988865
Q ss_pred ----------CChhHHhHhhhh-----------------cCCCCCCHHHHHHHHHHhhcC--------------------
Q 042825 473 ----------GTLGRHLFNWEE-----------------EGLEPLEWNTRLNIALDVARG-------------------- 505 (631)
Q Consensus 473 ----------gsL~~~L~~~~~-----------------~~~~~L~~~~~~~I~~~ia~g-------------------- 505 (631)
|+|.+++..... .....+++...+.++.+++.+
T Consensus 83 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~i~H~dl~p~nil 162 (288)
T cd05050 83 MCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERKFVHRDLATRNCL 162 (288)
T ss_pred cEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCeecccccHhheE
Confidence 566666653211 111346788888888887765
Q ss_pred ----CCcEEEeeccccccCCCCccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChHH
Q 042825 506 ----DDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT-GRKVVDATHSDPEY 580 (631)
Q Consensus 506 ----~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~Ellt-G~~P~~~~~~~~~~ 580 (631)
+.++|+|||+++................+..|+|||++.+..++.++|||||||++|||++ |..||.+....+ .
T Consensus 163 ~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~~~~~-~ 241 (288)
T cd05050 163 VGENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMAHEE-V 241 (288)
T ss_pred ecCCCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHHH-H
Confidence 3578999999986542221111223345678999999988899999999999999999998 888987543221 1
Q ss_pred HHHHHHH-hHh-hhcCChhHHHHHHhhcCCChhhHHhHHHHHHH
Q 042825 581 IIHLATW-FQK-MHKNHDTFQMAIDKTIQLDEENLANVSTVAEL 622 (631)
Q Consensus 581 ~~~l~~~-~~~-~~~~~~~l~~~id~~L~~d~~~r~~~~~vl~l 622 (631)
...+... ... ....+.++.+++.+|+..+|.+||++.++++.
T Consensus 242 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~~ 285 (288)
T cd05050 242 IYYVRDGNVLSCPDNCPLELYNLMRLCWSKLPSDRPSFASINRI 285 (288)
T ss_pred HHHHhcCCCCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHH
Confidence 1111110 000 11124678999999999999999999998875
|
Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M |
| >cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2 | Back alignment and domain information |
|---|
Probab=99.82 E-value=2.4e-19 Score=180.91 Aligned_cols=195 Identities=21% Similarity=0.350 Sum_probs=143.4
Q ss_pred CcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc-------------------------
Q 042825 419 NFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK------------------------- 472 (631)
Q Consensus 419 ~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~------------------------- 472 (631)
+|+..+.||.|+||.||++... +++.||+|++..........+++..|++++++
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVM 80 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEe
Confidence 4777899999999999999864 68899999997665556667788899888765
Q ss_pred -----CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC-----------------------------CCcEEEeeccccc
Q 042825 473 -----GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG-----------------------------DDMRVADFGLVRL 518 (631)
Q Consensus 473 -----gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g-----------------------------~~~kl~DFGla~~ 518 (631)
++|.+++.... .....+++.....++.+++.+ +.+||+|||+++.
T Consensus 81 e~~~~~~L~~~l~~~~-~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~~kl~d~g~~~~ 159 (265)
T cd08217 81 EYCEGGDLAQLIQKCK-KERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKI 159 (265)
T ss_pred hhccCCCHHHHHHHHh-hcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCCCEEEeccccccc
Confidence 44555553321 123457777776666555432 4578999999987
Q ss_pred cCCCCccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHhHhh------h
Q 042825 519 VPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQKM------H 592 (631)
Q Consensus 519 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~~~~------~ 592 (631)
..... .......|+..|+|||++....++.++||||||+++|||++|+.||...... .+....... .
T Consensus 160 ~~~~~--~~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~-----~~~~~~~~~~~~~~~~ 232 (265)
T cd08217 160 LGHDS--SFAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQL-----QLASKIKEGKFRRIPY 232 (265)
T ss_pred ccCCc--ccccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcCHH-----HHHHHHhcCCCCCCcc
Confidence 64222 1133457899999999998888999999999999999999999999864321 111221111 1
Q ss_pred cCChhHHHHHHhhcCCChhhHHhHHHHHH
Q 042825 593 KNHDTFQMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 593 ~~~~~l~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
..+.++.+++..|+..+|.+|+++.++++
T Consensus 233 ~~~~~~~~l~~~~l~~~p~~Rp~~~~il~ 261 (265)
T cd08217 233 RYSSELNEVIKSMLNVDPDKRPSTEELLQ 261 (265)
T ss_pred ccCHHHHHHHHHHccCCcccCCCHHHHhh
Confidence 12467899999999999999999999875
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi |
| >cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.6e-19 Score=182.59 Aligned_cols=201 Identities=19% Similarity=0.325 Sum_probs=142.2
Q ss_pred CCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc------------------------
Q 042825 418 NNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK------------------------ 472 (631)
Q Consensus 418 ~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~------------------------ 472 (631)
++|+..+.||.|+||+||+|... ++..+|+|++....... ..+.+.+|++++..
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e 79 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQT-SVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMP 79 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcch-HHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEe
Confidence 47888999999999999999965 58899999987654333 56778899887765
Q ss_pred ----CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCCc
Q 042825 473 ----GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENGK 524 (631)
Q Consensus 473 ----gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~~ 524 (631)
+++.+++.... ....+++.....++.+++.+ +.++|+|||++..+.....
T Consensus 80 ~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~ql~~al~~lh~~~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~~ 157 (267)
T cd06610 80 YLSGGSLLDIMKSSY--PRGGLDEAIIATVLKEVLKGLEYLHSNGQIHRDIKAGNILLGEDGSVKIADFGVSASLADGGD 157 (267)
T ss_pred ccCCCcHHHHHHHhc--ccCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCCCEEEcccchHHHhccCcc
Confidence 45555553211 12356777777777766654 4578999999987643222
Q ss_pred c--ccccccccCcccccccccccC-CCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHhHhh------hcCC
Q 042825 525 H--SILTKVAGTFGYLAPEYIVTG-RITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQKM------HKNH 595 (631)
Q Consensus 525 ~--~~~~~~~gt~~Y~aPE~~~~~-~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~~~~------~~~~ 595 (631)
. .......|+..|+|||++... .++.++|||||||++|||++|+.||............+..-.... ...+
T Consensus 158 ~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (267)
T cd06610 158 RTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMKVLMLTLQNDPPSLETGADYKKYS 237 (267)
T ss_pred ccccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhhhHHHHhcCCCCCcCCcccccccc
Confidence 1 122345689999999998776 789999999999999999999999976543211111111100000 0123
Q ss_pred hhHHHHHHhhcCCChhhHHhHHHHHH
Q 042825 596 DTFQMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 596 ~~l~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
+.+.+++.+|+..+|+.|+++.++++
T Consensus 238 ~~~~~li~~~l~~~p~~Rp~~~~ll~ 263 (267)
T cd06610 238 KSFRKMISLCLQKDPSKRPTAEELLK 263 (267)
T ss_pred HHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 56899999999999999999998875
|
Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 |
| >cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.82 E-value=7.1e-20 Score=192.15 Aligned_cols=199 Identities=20% Similarity=0.239 Sum_probs=133.0
Q ss_pred CCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCC-CHHHHHHHHHHHHHHhc-----------------------
Q 042825 418 NNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSV-TEQGIAQFESEITVLTK----------------------- 472 (631)
Q Consensus 418 ~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~-~~~~~~~~~~Ei~~l~~----------------------- 472 (631)
++|+..+.||+|+||+||+++.. +++.||||++..... .....+.+..|+.++..
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVM 80 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEE
Confidence 47888999999999999999966 589999999975321 22334567788877654
Q ss_pred -----CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCC
Q 042825 473 -----GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENG 523 (631)
Q Consensus 473 -----gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~ 523 (631)
|+|.+++.. ....+.......++.+++.| +.+||+|||+++.+....
T Consensus 81 e~~~g~~L~~~l~~----~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~ 156 (331)
T cd05597 81 DYYVGGDLLTLLSK----FEDRLPEDMARFYLAEMVLAIDSVHQLGYVHRDIKPDNVLLDKNGHIRLADFGSCLRLLADG 156 (331)
T ss_pred ecCCCCcHHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHhCCeEECCCCHHHEEECCCCCEEEEECCceeecCCCC
Confidence 555555532 12346666666666666655 467899999997654221
Q ss_pred ccccccccccCccccccccccc-----CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHh------Hhhh
Q 042825 524 KHSILTKVAGTFGYLAPEYIVT-----GRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWF------QKMH 592 (631)
Q Consensus 524 ~~~~~~~~~gt~~Y~aPE~~~~-----~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~------~~~~ 592 (631)
........||+.|+|||++.. ..++.++|||||||++|||++|+.||......+ ....+.... ....
T Consensus 157 -~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~-~~~~i~~~~~~~~~~~~~~ 234 (331)
T cd05597 157 -TVQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVE-TYGKIMNHKEHFQFPPDVT 234 (331)
T ss_pred -CccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCHHH-HHHHHHcCCCcccCCCccC
Confidence 112233569999999999863 457889999999999999999999997543221 111121110 0001
Q ss_pred cCChhHHHHHHhhcCCChh--hHHhHHHHHHH
Q 042825 593 KNHDTFQMAIDKTIQLDEE--NLANVSTVAEL 622 (631)
Q Consensus 593 ~~~~~l~~~id~~L~~d~~--~r~~~~~vl~l 622 (631)
..++++++++.++|..++. .|+++.++++.
T Consensus 235 ~~~~~~~~li~~ll~~~~~r~~r~~~~~~l~h 266 (331)
T cd05597 235 DVSEEAKDLIRRLICSPETRLGRNGLQDFKDH 266 (331)
T ss_pred CCCHHHHHHHHHHccCcccccCCCCHHHHhcC
Confidence 1356789999998854333 25677766543
|
Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy, |
| >cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor | Back alignment and domain information |
|---|
Probab=99.82 E-value=2.6e-20 Score=198.99 Aligned_cols=197 Identities=18% Similarity=0.258 Sum_probs=134.8
Q ss_pred CCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCC-CHHHHHHHHHHHHHHhc-----------------------
Q 042825 418 NNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSV-TEQGIAQFESEITVLTK----------------------- 472 (631)
Q Consensus 418 ~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~-~~~~~~~~~~Ei~~l~~----------------------- 472 (631)
++|+..+.||+|+||.||+++.. +++.||||++..... .....+.+.+|++++.+
T Consensus 1 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (376)
T cd05598 1 SMFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVM 80 (376)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEE
Confidence 36889999999999999999965 589999999865322 12234567889888765
Q ss_pred -----CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCC
Q 042825 473 -----GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENG 523 (631)
Q Consensus 473 -----gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~ 523 (631)
|+|.+++.. ...+.......++.+++.| +.+||+|||+|+......
T Consensus 81 E~~~~g~L~~~i~~-----~~~~~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~~ 155 (376)
T cd05598 81 DYIPGGDMMSLLIR-----LGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTH 155 (376)
T ss_pred eCCCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHEEECCCCCEEEEeCCCCccccccc
Confidence 556665532 1234444444455555444 467899999985321000
Q ss_pred -----------------------------------------ccccccccccCcccccccccccCCCCchhhHHHHHHHHH
Q 042825 524 -----------------------------------------KHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILM 562 (631)
Q Consensus 524 -----------------------------------------~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ 562 (631)
........+||+.|||||++.+..++.++|||||||++|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvily 235 (376)
T cd05598 156 DSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILY 235 (376)
T ss_pred cccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccceee
Confidence 000112357999999999999989999999999999999
Q ss_pred HHHcCCCCCCCCCCChHHHHHHHHHhHhh-----hcCChhHHHHHHhhcCCChhhHH---hHHHHHH
Q 042825 563 DLITGRKVVDATHSDPEYIIHLATWFQKM-----HKNHDTFQMAIDKTIQLDEENLA---NVSTVAE 621 (631)
Q Consensus 563 ElltG~~P~~~~~~~~~~~~~l~~~~~~~-----~~~~~~l~~~id~~L~~d~~~r~---~~~~vl~ 621 (631)
||++|+.||.+....+ ....+..|.... ...+.++.+++.+++ .+|.+|. ++.++++
T Consensus 236 ell~G~~Pf~~~~~~~-~~~~i~~~~~~~~~~~~~~~s~~~~~li~~l~-~~p~~R~~~~t~~ell~ 300 (376)
T cd05598 236 EMLVGQPPFLADTPAE-TQLKVINWETTLHIPSQAKLSREASDLILRLC-CGAEDRLGKNGADEIKA 300 (376)
T ss_pred ehhhCCCCCCCCCHHH-HHHHHhccCccccCCCCCCCCHHHHHHHHHHh-cCHhhcCCCCCHHHHhC
Confidence 9999999998654322 222233332211 123467889999876 5899998 7777654
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. |
| >KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.82 E-value=2.3e-20 Score=186.37 Aligned_cols=192 Identities=21% Similarity=0.353 Sum_probs=144.4
Q ss_pred cCCcccceeecCCCceEEEEEEe-cCCcEEEEEEEecCCC-CHHHHHHHHHHHHHHhc----------------------
Q 042825 417 TNNFSEENRLGRGGVGTVYKGEL-KDGTEVGVKRMELGSV-TEQGIAQFESEITVLTK---------------------- 472 (631)
Q Consensus 417 t~~f~~~~~iG~G~fg~Vyk~~~-~~g~~vAvK~l~~~~~-~~~~~~~~~~Ei~~l~~---------------------- 472 (631)
..+|+..+.||+|.||.|-+++. ..|+.||||.+++..+ +++....+.+||++|+.
T Consensus 52 kHRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIviv 131 (668)
T KOG0611|consen 52 KHRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVIV 131 (668)
T ss_pred hhHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEEE
Confidence 34677889999999999999984 6799999999987765 34556678999999976
Q ss_pred ------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCC
Q 042825 473 ------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPEN 522 (631)
Q Consensus 473 ------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~ 522 (631)
|.|++|+.+ ...|......++..+|..+ .++||+|||++-+...
T Consensus 132 MEYaS~GeLYDYiSe-----r~~LsErEaRhfFRQIvSAVhYCHknrVvHRDLKLENILLD~N~NiKIADFGLSNly~~- 205 (668)
T KOG0611|consen 132 MEYASGGELYDYISE-----RGSLSEREARHFFRQIVSAVHYCHKNRVVHRDLKLENILLDQNNNIKIADFGLSNLYAD- 205 (668)
T ss_pred EEecCCccHHHHHHH-----hccccHHHHHHHHHHHHHHHHHHhhccceecccchhheeecCCCCeeeeccchhhhhcc-
Confidence 777777743 2234444444444444332 6789999999987642
Q ss_pred CccccccccccCcccccccccccCCCC-chhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHhH----hhhcCChh
Q 042825 523 GKHSILTKVAGTFGYLAPEYIVTGRIT-AKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQ----KMHKNHDT 597 (631)
Q Consensus 523 ~~~~~~~~~~gt~~Y~aPE~~~~~~~~-~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~~----~~~~~~~~ 597 (631)
.....++||++-|.+||++.+..|. +.+|-||+||+||.|+.|..|||+.+. ..++.... .-.....+
T Consensus 206 --~kfLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dh-----k~lvrQIs~GaYrEP~~PSd 278 (668)
T KOG0611|consen 206 --KKFLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDH-----KRLVRQISRGAYREPETPSD 278 (668)
T ss_pred --ccHHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchH-----HHHHHHhhcccccCCCCCch
Confidence 2346789999999999999999885 689999999999999999999997532 23333221 11122356
Q ss_pred HHHHHHhhcCCChhhHHhHHHHHH
Q 042825 598 FQMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 598 l~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
..-+|+-||.++|+.|.++.+++.
T Consensus 279 A~gLIRwmLmVNP~RRATieDiAs 302 (668)
T KOG0611|consen 279 ASGLIRWMLMVNPERRATIEDIAS 302 (668)
T ss_pred HHHHHHHHHhcCcccchhHHHHhh
Confidence 788999999999999999887654
|
|
| >KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.82 E-value=5.2e-20 Score=202.01 Aligned_cols=200 Identities=21% Similarity=0.238 Sum_probs=147.8
Q ss_pred CCcccceeecCCCceEEEEEEecCC-cEEEEEEEecCCCCHHHHHHHHHHHHHHhc------------------------
Q 042825 418 NNFSEENRLGRGGVGTVYKGELKDG-TEVGVKRMELGSVTEQGIAQFESEITVLTK------------------------ 472 (631)
Q Consensus 418 ~~f~~~~~iG~G~fg~Vyk~~~~~g-~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~------------------------ 472 (631)
.++.+.+.|.+|||+.||.|+...+ ..+|+|++-.. ++...+...+||++|++
T Consensus 37 ~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~--de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~ 114 (738)
T KOG1989|consen 37 HRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVN--DEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGV 114 (738)
T ss_pred EEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecC--CHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCce
Confidence 3456789999999999999997665 99999999765 56678889999999987
Q ss_pred ------------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC--------------------------CCcEEEeec
Q 042825 473 ------------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG--------------------------DDMRVADFG 514 (631)
Q Consensus 473 ------------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g--------------------------~~~kl~DFG 514 (631)
|+|-+++..+.. ..|+....++|+.+++++ +++||||||
T Consensus 115 ~EvllLmEyC~gg~Lvd~mn~Rlq---~~lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDLKiENvLls~~g~~KLCDFG 191 (738)
T KOG1989|consen 115 WEVLLLMEYCKGGSLVDFMNTRLQ---TRLTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDLKIENVLLSADGNYKLCDFG 191 (738)
T ss_pred eEEEeehhhccCCcHHHHHHHHHh---ccCChHHHHHHHHHHHHHHHHHhcCCCccchhhhhhhheEEcCCCCEEeCccc
Confidence 455555543222 248888999999999987 568999999
Q ss_pred cccccCCCC-cccc------ccccccCcccccccccc---cCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHH
Q 042825 515 LVRLVPENG-KHSI------LTKVAGTFGYLAPEYIV---TGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHL 584 (631)
Q Consensus 515 la~~~~~~~-~~~~------~~~~~gt~~Y~aPE~~~---~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l 584 (631)
-|....... .... .-...-|+-|+|||++. +...++|+|||++||+||-|+....||+....- ..+
T Consensus 192 Satt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~l----aIl 267 (738)
T KOG1989|consen 192 SATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGKL----AIL 267 (738)
T ss_pred ccccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcce----eEE
Confidence 986432111 1000 01124589999999984 556899999999999999999999999864211 111
Q ss_pred HHHh--HhhhcCChhHHHHHHhhcCCChhhHHhHHHHHHHHHhh
Q 042825 585 ATWF--QKMHKNHDTFQMAIDKTIQLDEENLANVSTVAELGDHC 626 (631)
Q Consensus 585 ~~~~--~~~~~~~~~l~~~id~~L~~d~~~r~~~~~vl~lal~C 626 (631)
..-+ ....+.++.+.++|..||+.+|.+||.+.+|+..+.+-
T Consensus 268 ng~Y~~P~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l 311 (738)
T KOG1989|consen 268 NGNYSFPPFPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFEL 311 (738)
T ss_pred eccccCCCCccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHHH
Confidence 1111 11123357899999999999999999999998876543
|
|
| >cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9 | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.9e-19 Score=181.23 Aligned_cols=198 Identities=20% Similarity=0.282 Sum_probs=146.2
Q ss_pred CcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc-------------------------
Q 042825 419 NFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK------------------------- 472 (631)
Q Consensus 419 ~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~------------------------- 472 (631)
+|+..+.||+|+||.||.++.. +++.+++|++..........+++.+|++++++
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e~ 80 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEY 80 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEEe
Confidence 4778899999999999999854 58899999987765556667789999998877
Q ss_pred ---CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCCcc
Q 042825 473 ---GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENGKH 525 (631)
Q Consensus 473 ---gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~~~ 525 (631)
++|.+++.. .....+++.....++.+++++ +.+||+|||+++......
T Consensus 81 ~~~~~L~~~~~~---~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~-- 155 (256)
T cd08221 81 ANGGTLYDKIVR---QKGQLFEEEMVLWYLFQIVSAVSYIHKAGILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEY-- 155 (256)
T ss_pred cCCCcHHHHHHh---ccccCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChHhEEEeCCCCEEECcCcceEEccccc--
Confidence 456555532 113457777777777776654 457899999998764222
Q ss_pred ccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHH-HHhHhhhcCChhHHHHHHh
Q 042825 526 SILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLA-TWFQKMHKNHDTFQMAIDK 604 (631)
Q Consensus 526 ~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~-~~~~~~~~~~~~l~~~id~ 604 (631)
.......|+..|+|||+..+..++.++||||||+++|||++|+.||+.....+....... .+.......+.++.+++.+
T Consensus 156 ~~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 235 (256)
T cd08221 156 SMAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNPLNLVVKIVQGNYTPVVSVYSSELISLVHS 235 (256)
T ss_pred ccccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCCccccCHHHHHHHHH
Confidence 123446789999999999888899999999999999999999999976433211111111 0111111124678999999
Q ss_pred hcCCChhhHHhHHHHHH
Q 042825 605 TIQLDEENLANVSTVAE 621 (631)
Q Consensus 605 ~L~~d~~~r~~~~~vl~ 621 (631)
++..+|.+|+++.++++
T Consensus 236 ~l~~~p~~R~s~~~ll~ 252 (256)
T cd08221 236 LLQQDPEKRPTADEVLD 252 (256)
T ss_pred HcccCcccCCCHHHHhh
Confidence 99999999999998875
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa |
| >cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.6e-19 Score=185.56 Aligned_cols=199 Identities=21% Similarity=0.294 Sum_probs=143.0
Q ss_pred CcccceeecCCCceEEEEEEec------CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc--------------------
Q 042825 419 NFSEENRLGRGGVGTVYKGELK------DGTEVGVKRMELGSVTEQGIAQFESEITVLTK-------------------- 472 (631)
Q Consensus 419 ~f~~~~~iG~G~fg~Vyk~~~~------~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~-------------------- 472 (631)
+|...+.||+|+||.||+|+.. ....+|+|.+.... .....+++.+|++++..
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 79 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENA-SSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLL 79 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCC-CHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcE
Confidence 4677899999999999999853 23578888886543 33455778899988765
Q ss_pred --------CChhHHhHhhhh-------------------cCCCCCCHHHHHHHHHHhhcC--------------------
Q 042825 473 --------GTLGRHLFNWEE-------------------EGLEPLEWNTRLNIALDVARG-------------------- 505 (631)
Q Consensus 473 --------gsL~~~L~~~~~-------------------~~~~~L~~~~~~~I~~~ia~g-------------------- 505 (631)
|+|.+++..... .....+++.....++.+++.+
T Consensus 80 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~ivH~dikp~nil 159 (290)
T cd05045 80 LIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMKLVHRDLAARNVL 159 (290)
T ss_pred EEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCCeehhhhhhheEE
Confidence 566666643110 112357888888888888865
Q ss_pred ----CCcEEEeeccccccCCCCccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChHH
Q 042825 506 ----DDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT-GRKVVDATHSDPEY 580 (631)
Q Consensus 506 ----~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~Ellt-G~~P~~~~~~~~~~ 580 (631)
..+||+|||+++...............++..|+|||++.+..++.++||||||+++|||+| |+.||.+.... .
T Consensus 160 l~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~--~ 237 (290)
T cd05045 160 VAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAPE--R 237 (290)
T ss_pred EcCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCCCHH--H
Confidence 4578999999986642222112233456778999999988889999999999999999999 99999754322 1
Q ss_pred HHHHHHHhHh------hhcCChhHHHHHHhhcCCChhhHHhHHHHHHHH
Q 042825 581 IIHLATWFQK------MHKNHDTFQMAIDKTIQLDEENLANVSTVAELG 623 (631)
Q Consensus 581 ~~~l~~~~~~------~~~~~~~l~~~id~~L~~d~~~r~~~~~vl~la 623 (631)
+..+... ....+.++.+++..|+..+|.+||++.++++..
T Consensus 238 ---~~~~~~~~~~~~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l 283 (290)
T cd05045 238 ---LFNLLKTGYRMERPENCSEEMYNLMLTCWKQEPDKRPTFADISKEL 283 (290)
T ss_pred ---HHHHHhCCCCCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHH
Confidence 1122211 112246899999999999999999999987754
|
Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi |
| >cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6 | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.5e-19 Score=184.83 Aligned_cols=204 Identities=21% Similarity=0.312 Sum_probs=141.8
Q ss_pred cCHHHHHhhcCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc--------------
Q 042825 408 IPIQVLRNATNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK-------------- 472 (631)
Q Consensus 408 ~~~~~l~~~t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~-------------- 472 (631)
.++.++..+.+.|+..+.||+|+||.||+|+.. +++.+|+|.+.... ....++..|+.++.+
T Consensus 6 ~~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~---~~~~~~~~e~~~l~~~~~h~~i~~~~~~~ 82 (282)
T cd06636 6 IDLSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE---DEEEEIKLEINMLKKYSHHRNIATYYGAF 82 (282)
T ss_pred hhhhhhcChhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecCh---HHHHHHHHHHHHHHHhcCCCcEEEEeeeh
Confidence 456667778889999999999999999999975 58899999886532 234567777766544
Q ss_pred ---------------------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CC
Q 042825 473 ---------------------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DD 507 (631)
Q Consensus 473 ---------------------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~ 507 (631)
|++.+++.. .....+.+.....++.+++.+ +.
T Consensus 83 ~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~---~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dl~~~nili~~~~~ 159 (282)
T cd06636 83 IKKSPPGHDDQLWLVMEFCGAGSVTDLVKN---TKGNALKEDWIAYICREILRGLAHLHAHKVIHRDIKGQNVLLTENAE 159 (282)
T ss_pred hcccccCCCCEEEEEEEeCCCCcHHHHHHH---ccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCC
Confidence 233333321 112346666666666666654 45
Q ss_pred cEEEeeccccccCCCCccccccccccCcccccccccc-----cCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHH
Q 042825 508 MRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIV-----TGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYII 582 (631)
Q Consensus 508 ~kl~DFGla~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-----~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~ 582 (631)
++|+|||+++..... ........|+..|+|||.+. ...++.++|||||||++|||++|+.||....... ..
T Consensus 160 ~~l~dfg~~~~~~~~--~~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~--~~ 235 (282)
T cd06636 160 VKLVDFGVSAQLDRT--VGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMR--AL 235 (282)
T ss_pred EEEeeCcchhhhhcc--ccCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHh--hh
Confidence 789999998865311 11223457899999999875 3458889999999999999999999997543221 11
Q ss_pred HHHHHhHh--hh--cCChhHHHHHHhhcCCChhhHHhHHHHHH
Q 042825 583 HLATWFQK--MH--KNHDTFQMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 583 ~l~~~~~~--~~--~~~~~l~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
....+... .. ..+.++.+++.+|+..+|.+|+++.++++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~ 278 (282)
T cd06636 236 FLIPRNPPPKLKSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLK 278 (282)
T ss_pred hhHhhCCCCCCcccccCHHHHHHHHHHhCCChhhCcCHHHHhc
Confidence 11111111 00 12467899999999999999999998875
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea |
| >cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.6e-19 Score=182.31 Aligned_cols=199 Identities=24% Similarity=0.369 Sum_probs=143.5
Q ss_pred hcCCcccceeecCCCceEEEEEEecCCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc-----------------------
Q 042825 416 ATNNFSEENRLGRGGVGTVYKGELKDGTEVGVKRMELGSVTEQGIAQFESEITVLTK----------------------- 472 (631)
Q Consensus 416 ~t~~f~~~~~iG~G~fg~Vyk~~~~~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~----------------------- 472 (631)
..++|...+.||+|+||.||+|..++++.||||.+..... ..+++.+|+.++++
T Consensus 4 ~~~~~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~~---~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 80 (261)
T cd05034 4 PRESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGTM---SPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVT 80 (261)
T ss_pred chhheeeeeeeccCcceEEEEEEEcCCceEEEEEecCCcc---CHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEE
Confidence 3467888999999999999999988888999999876443 34678889888866
Q ss_pred -----CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCC
Q 042825 473 -----GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENG 523 (631)
Q Consensus 473 -----gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~ 523 (631)
++|.+++.. .....+++.+...++.+++.+ ..+|++|||+++......
T Consensus 81 e~~~~~~L~~~i~~---~~~~~~~~~~~~~~~~~i~~al~~lh~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~ 157 (261)
T cd05034 81 EYMSKGSLLDFLKS---GEGKKLRLPQLVDMAAQIAEGMAYLESRNYIHRDLAARNILVGENLVCKIADFGLARLIEDDE 157 (261)
T ss_pred eccCCCCHHHHHhc---cccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcchheEEEcCCCCEEECccccceeccchh
Confidence 455555532 222457888888888777655 457899999998764211
Q ss_pred ccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChHHHHHHHHHhH--hhhcCChhHHH
Q 042825 524 KHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT-GRKVVDATHSDPEYIIHLATWFQ--KMHKNHDTFQM 600 (631)
Q Consensus 524 ~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~Ellt-G~~P~~~~~~~~~~~~~l~~~~~--~~~~~~~~l~~ 600 (631)
........++..|+|||.+.+..++.++|||||||++||++| |+.||.+..... ....+..-.. .....+.++.+
T Consensus 158 -~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 235 (261)
T cd05034 158 -YTAREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNRE-VLEQVERGYRMPRPPNCPEELYD 235 (261)
T ss_pred -hhhhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHH-HHHHHHcCCCCCCCCCCCHHHHH
Confidence 111222345678999999988889999999999999999999 999997543221 1111111000 01112467899
Q ss_pred HHHhhcCCChhhHHhHHHHHHH
Q 042825 601 AIDKTIQLDEENLANVSTVAEL 622 (631)
Q Consensus 601 ~id~~L~~d~~~r~~~~~vl~l 622 (631)
++.+++..+|++|+++.++.++
T Consensus 236 ~i~~~l~~~p~~Rp~~~~l~~~ 257 (261)
T cd05034 236 LMLQCWDKDPEERPTFEYLQSF 257 (261)
T ss_pred HHHHHcccCcccCCCHHHHHHH
Confidence 9999999999999999988764
|
Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t |
| >cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1 | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.2e-19 Score=188.17 Aligned_cols=204 Identities=23% Similarity=0.283 Sum_probs=142.8
Q ss_pred CCcccceeecCCCceEEEEEEec--------CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc-----------------
Q 042825 418 NNFSEENRLGRGGVGTVYKGELK--------DGTEVGVKRMELGSVTEQGIAQFESEITVLTK----------------- 472 (631)
Q Consensus 418 ~~f~~~~~iG~G~fg~Vyk~~~~--------~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~----------------- 472 (631)
++|...+.||+|+||.||+++.. ++..+|+|.+.... ......++.+|++++.+
T Consensus 18 ~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~ 96 (307)
T cd05098 18 DRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDA-TEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD 96 (307)
T ss_pred HHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCC-ChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecC
Confidence 56888999999999999999753 23579999987542 33445678888887764
Q ss_pred ------------CChhHHhHhhhhc-----------CCCCCCHHHHHHHHHHhhcC------------------------
Q 042825 473 ------------GTLGRHLFNWEEE-----------GLEPLEWNTRLNIALDVARG------------------------ 505 (631)
Q Consensus 473 ------------gsL~~~L~~~~~~-----------~~~~L~~~~~~~I~~~ia~g------------------------ 505 (631)
|+|.+++...... ....++|...+.++.+++.+
T Consensus 97 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill~~~ 176 (307)
T cd05098 97 GPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTED 176 (307)
T ss_pred CceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCcccccccHHheEEcCC
Confidence 5777777542111 12358888888888888765
Q ss_pred CCcEEEeeccccccCCCCccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChHHHHHH
Q 042825 506 DDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT-GRKVVDATHSDPEYIIHL 584 (631)
Q Consensus 506 ~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~Ellt-G~~P~~~~~~~~~~~~~l 584 (631)
+.+||+|||+++...............++..|+|||++.+..++.++|||||||++|||++ |+.||......+ ....+
T Consensus 177 ~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~~~~-~~~~~ 255 (307)
T cd05098 177 NVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE-LFKLL 255 (307)
T ss_pred CcEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCCHHH-HHHHH
Confidence 4578999999986642111111222335578999999988889999999999999999998 888987543211 11111
Q ss_pred HH-HhHh-hhcCChhHHHHHHhhcCCChhhHHhHHHHHHHH
Q 042825 585 AT-WFQK-MHKNHDTFQMAIDKTIQLDEENLANVSTVAELG 623 (631)
Q Consensus 585 ~~-~~~~-~~~~~~~l~~~id~~L~~d~~~r~~~~~vl~la 623 (631)
.. +... ....+.++.+++.+++..+|.+|+++.++++..
T Consensus 256 ~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~l 296 (307)
T cd05098 256 KEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 296 (307)
T ss_pred HcCCCCCCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHHH
Confidence 11 1101 112246889999999999999999999987654
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase | Back alignment and domain information |
|---|
Probab=99.82 E-value=2.8e-19 Score=184.11 Aligned_cols=201 Identities=19% Similarity=0.255 Sum_probs=138.2
Q ss_pred CCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc------------------------
Q 042825 418 NNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK------------------------ 472 (631)
Q Consensus 418 ~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~------------------------ 472 (631)
++|+..+.||+|+||.||+|+.. +++.||||++............+.+|++++.+
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~ 80 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPS 80 (295)
T ss_pred CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCce
Confidence 46888999999999999999975 58999999886543222233567778877754
Q ss_pred ---------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC-------------------------CCcEEEeeccccc
Q 042825 473 ---------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG-------------------------DDMRVADFGLVRL 518 (631)
Q Consensus 473 ---------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g-------------------------~~~kl~DFGla~~ 518 (631)
+++.+++..........+++.....++.+++.| +.+||+|||+++.
T Consensus 81 ~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~~~nil~~~~~~~~kl~dfg~~~~ 160 (295)
T cd07837 81 LYLVFEYLDSDLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHGVMHRDLKPQNLLVDKQKGLLKIADLGLGRA 160 (295)
T ss_pred EEEEeeccCcCHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEecCCCeEEEeeccccee
Confidence 222333322111112457888888888888765 3578999999986
Q ss_pred cCCCCccccccccccCccccccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHh---------
Q 042825 519 VPENGKHSILTKVAGTFGYLAPEYIVT-GRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWF--------- 588 (631)
Q Consensus 519 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~--------- 588 (631)
..... .......+++.|+|||++.+ ..++.++|||||||++|||++|+.||.+..... ....+....
T Consensus 161 ~~~~~--~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 237 (295)
T cd07837 161 FSIPV--KSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQ-QLLHIFKLLGTPTEQVWP 237 (295)
T ss_pred cCCCc--cccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHH-HHHHHHHHhCCCChhhCc
Confidence 53211 11233457889999998865 457999999999999999999999997543221 111111100
Q ss_pred -------------------Hhh-hcCChhHHHHHHhhcCCChhhHHhHHHHHH
Q 042825 589 -------------------QKM-HKNHDTFQMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 589 -------------------~~~-~~~~~~l~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
... ...+.++.++|.++|..+|.+|+++.+++.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~ 290 (295)
T cd07837 238 GVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALT 290 (295)
T ss_pred chhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhc
Confidence 000 123467899999999999999999998764
|
Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm |
| >cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3 | Back alignment and domain information |
|---|
Probab=99.82 E-value=2.7e-19 Score=183.27 Aligned_cols=200 Identities=19% Similarity=0.289 Sum_probs=138.9
Q ss_pred CCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhcCChh---HH---------------
Q 042825 418 NNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTKGTLG---RH--------------- 478 (631)
Q Consensus 418 ~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~gsL~---~~--------------- 478 (631)
++|+..+.||+|+||.||+|+.+ +++.||+|++..........+.+.+|++++.+-+.. ..
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 80 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFE 80 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEEe
Confidence 46888899999999999999976 489999998865433333456788898888761100 00
Q ss_pred ------hHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCCccccc
Q 042825 479 ------LFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENGKHSIL 528 (631)
Q Consensus 479 ------L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~~~~~~ 528 (631)
+..+. .....++|.....++.+++++ +.++|+|||+++...... ...
T Consensus 81 ~~~~~~l~~~~-~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~--~~~ 157 (286)
T cd07846 81 FVDHTVLDDLE-KYPNGLDESRVRKYLFQILRGIEFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPG--EVY 157 (286)
T ss_pred cCCccHHHHHH-hccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCcEEEEeeeeeeeccCCc--ccc
Confidence 00011 112357899999998888865 457899999998764222 223
Q ss_pred cccccCccccccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHhHh-----------------
Q 042825 529 TKVAGTFGYLAPEYIVT-GRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQK----------------- 590 (631)
Q Consensus 529 ~~~~gt~~Y~aPE~~~~-~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~~~----------------- 590 (631)
....++..|+|||+..+ ..++.++|||||||++|||++|+.||...... .....+..+...
T Consensus 158 ~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (286)
T cd07846 158 TDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDI-DQLYHIIKCLGNLIPRHQEIFQKNPLFAG 236 (286)
T ss_pred CcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchH-HHHHHHHHHhCCCchhhHHHhccchHhhc
Confidence 44568899999999875 45788999999999999999999999754321 111111111000
Q ss_pred ---------------hhcCChhHHHHHHhhcCCChhhHHhHHHHHH
Q 042825 591 ---------------MHKNHDTFQMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 591 ---------------~~~~~~~l~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
....+..+.+++..|+..+|++|+++.++++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~ 282 (286)
T cd07846 237 MRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLH 282 (286)
T ss_pred cccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhc
Confidence 0012356889999999999999999998764
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI |
| >cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta | Back alignment and domain information |
|---|
Probab=99.82 E-value=4.5e-20 Score=193.61 Aligned_cols=198 Identities=19% Similarity=0.240 Sum_probs=132.0
Q ss_pred CCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCC-CHHHHHHHHHHHHHHhc-----------------------
Q 042825 418 NNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSV-TEQGIAQFESEITVLTK----------------------- 472 (631)
Q Consensus 418 ~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~-~~~~~~~~~~Ei~~l~~----------------------- 472 (631)
++|...+.||+|+||+||+++.+ +++.||+|.+..... .......+..|+.++..
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~ 80 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVM 80 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 47889999999999999999976 588999999865321 22234457777777654
Q ss_pred -----CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCC
Q 042825 473 -----GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENG 523 (631)
Q Consensus 473 -----gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~ 523 (631)
|+|.+++.. ....+.+.....++.+++.| +.+||+|||+++......
T Consensus 81 Ey~~gg~L~~~l~~----~~~~l~~~~~~~~~~qi~~~L~~lH~~~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~ 156 (331)
T cd05624 81 DYYVGGDLLTLLSK----FEDRLPEDMARFYIAEMVLAIHSIHQLHYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQDG 156 (331)
T ss_pred eCCCCCcHHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCchHHEEEcCCCCEEEEeccceeeccCCC
Confidence 566666642 12345666666666555544 467899999998764222
Q ss_pred ccccccccccCccccccccccc-----CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHh------Hhhh
Q 042825 524 KHSILTKVAGTFGYLAPEYIVT-----GRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWF------QKMH 592 (631)
Q Consensus 524 ~~~~~~~~~gt~~Y~aPE~~~~-----~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~------~~~~ 592 (631)
. .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||......+ ....+.... ....
T Consensus 157 ~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~-~~~~i~~~~~~~~~p~~~~ 234 (331)
T cd05624 157 T-VQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVE-TYGKIMNHEERFQFPSHIT 234 (331)
T ss_pred c-eeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCHHH-HHHHHHcCCCcccCCCccc
Confidence 1 12234579999999999865 468899999999999999999999997643321 111121111 1111
Q ss_pred cCChhHHHHHHhhcCCChhh--HHhHHHHHH
Q 042825 593 KNHDTFQMAIDKTIQLDEEN--LANVSTVAE 621 (631)
Q Consensus 593 ~~~~~l~~~id~~L~~d~~~--r~~~~~vl~ 621 (631)
..++++++++.+++..++.. |.++.++++
T Consensus 235 ~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~ 265 (331)
T cd05624 235 DVSEEAKDLIQRLICSRERRLGQNGIEDFKK 265 (331)
T ss_pred cCCHHHHHHHHHHccCchhhcCCCCHHHHhc
Confidence 22568899999998754432 235555543
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues. |
| >cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.5e-19 Score=182.61 Aligned_cols=194 Identities=24% Similarity=0.368 Sum_probs=142.8
Q ss_pred cCCcccceeecCCCceEEEEEEecCCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc------------------------
Q 042825 417 TNNFSEENRLGRGGVGTVYKGELKDGTEVGVKRMELGSVTEQGIAQFESEITVLTK------------------------ 472 (631)
Q Consensus 417 t~~f~~~~~iG~G~fg~Vyk~~~~~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~------------------------ 472 (631)
.++|...+.||+|+||.||++...++..+|+|.+.... ...+.|.+|++++.+
T Consensus 5 ~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~~---~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~v~e~ 81 (260)
T cd05073 5 RESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS---MSVEAFLAEANVMKTLQHDKLVKLHAVVTKEPIYIITEF 81 (260)
T ss_pred ccceeEEeEecCccceEEEEEEecCCccEEEEecCCCh---hHHHHHHHHHHHHHhcCCCCcceEEEEEcCCCeEEEEEe
Confidence 35788899999999999999998778889999886532 245678889888876
Q ss_pred ---CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCCcc
Q 042825 473 ---GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENGKH 525 (631)
Q Consensus 473 ---gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~~~ 525 (631)
+++.+++.. .....++|.++..++.+++.+ ..+||+|||.++...... .
T Consensus 82 ~~~~~L~~~~~~---~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~-~ 157 (260)
T cd05073 82 MAKGSLLDFLKS---DEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNE-Y 157 (260)
T ss_pred CCCCcHHHHHHh---CCccccCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCCcEEECCCcceeeccCCC-c
Confidence 455555532 223457888888888777765 457899999998664221 1
Q ss_pred ccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChHHHHHHHHHhHh------hhcCChhH
Q 042825 526 SILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT-GRKVVDATHSDPEYIIHLATWFQK------MHKNHDTF 598 (631)
Q Consensus 526 ~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~Ellt-G~~P~~~~~~~~~~~~~l~~~~~~------~~~~~~~l 598 (631)
.......++..|+|||++....++.++|||||||++||++| |+.||...... .+..+... ....+.++
T Consensus 158 ~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~ 232 (260)
T cd05073 158 TAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNP-----EVIRALERGYRMPRPENCPEEL 232 (260)
T ss_pred ccccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHH-----HHHHHHhCCCCCCCcccCCHHH
Confidence 12223446678999999988889999999999999999999 99999754322 11122111 11224678
Q ss_pred HHHHHhhcCCChhhHHhHHHHHHH
Q 042825 599 QMAIDKTIQLDEENLANVSTVAEL 622 (631)
Q Consensus 599 ~~~id~~L~~d~~~r~~~~~vl~l 622 (631)
.+++.+++..+|++|+++.++.++
T Consensus 233 ~~~i~~~l~~~p~~Rp~~~~l~~~ 256 (260)
T cd05073 233 YNIMMRCWKNRPEERPTFEYIQSV 256 (260)
T ss_pred HHHHHHHcccCcccCcCHHHHHHH
Confidence 999999999999999999988764
|
Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa |
| >cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2 | Back alignment and domain information |
|---|
Probab=99.82 E-value=9.7e-20 Score=183.18 Aligned_cols=193 Identities=22% Similarity=0.322 Sum_probs=142.6
Q ss_pred CCcccceeecCCCceEEEEEEecC-CcEEEEEEEecCCCCHHHHHHHHHHHHHHhc------------------------
Q 042825 418 NNFSEENRLGRGGVGTVYKGELKD-GTEVGVKRMELGSVTEQGIAQFESEITVLTK------------------------ 472 (631)
Q Consensus 418 ~~f~~~~~iG~G~fg~Vyk~~~~~-g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~------------------------ 472 (631)
++|+..+.||+|+||.||+|+..+ ++.+|+|.+.... ..+++.+|++++.+
T Consensus 3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~----~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e 78 (256)
T cd06612 3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEE----DLQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVME 78 (256)
T ss_pred ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHH----HHHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEe
Confidence 578888999999999999999775 8899999986532 25788899888766
Q ss_pred ----CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCCc
Q 042825 473 ----GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENGK 524 (631)
Q Consensus 473 ----gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~~ 524 (631)
++|.+++. .....++|.....++.+++.| +.++|+|||++.......
T Consensus 79 ~~~~~~L~~~l~----~~~~~l~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~- 153 (256)
T cd06612 79 YCGAGSVSDIMK----ITNKTLTEEEIAAILYQTLKGLEYLHSNKKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTM- 153 (256)
T ss_pred cCCCCcHHHHHH----hCccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEECCCCcEEEcccccchhcccCc-
Confidence 34444442 223567888888888887765 457899999998764221
Q ss_pred cccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHhHhhh----cCChhHHH
Q 042825 525 HSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQKMH----KNHDTFQM 600 (631)
Q Consensus 525 ~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~~~~~----~~~~~l~~ 600 (631)
.......|+..|+|||++.+..++.++|||||||++|||++|+.||........ ......+..... ..+.++.+
T Consensus 154 -~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 231 (256)
T cd06612 154 -AKRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRA-IFMIPNKPPPTLSDPEKWSPEFND 231 (256)
T ss_pred -cccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhh-hhhhccCCCCCCCchhhcCHHHHH
Confidence 122345588999999999888999999999999999999999999975433211 111111111111 12357899
Q ss_pred HHHhhcCCChhhHHhHHHHHH
Q 042825 601 AIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 601 ~id~~L~~d~~~r~~~~~vl~ 621 (631)
++.+|+..+|.+|+++.++++
T Consensus 232 ~i~~~l~~~P~~Rps~~~il~ 252 (256)
T cd06612 232 FVKKCLVKDPEERPSAIQLLQ 252 (256)
T ss_pred HHHHHHhcChhhCcCHHHHhc
Confidence 999999999999999998875
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a |
| >cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3 | Back alignment and domain information |
|---|
Probab=99.82 E-value=9.1e-20 Score=183.55 Aligned_cols=198 Identities=19% Similarity=0.279 Sum_probs=141.1
Q ss_pred CcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc-------------------------
Q 042825 419 NFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK------------------------- 472 (631)
Q Consensus 419 ~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~------------------------- 472 (631)
+|+..+.||+|+||.||++... +++.+|+|.++... .....+.+.+|+.++.+
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 79 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPK-SSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEY 79 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCc-chHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEee
Confidence 4778899999999999999865 58899999987543 23455678888887765
Q ss_pred ---CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCCcc
Q 042825 473 ---GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENGKH 525 (631)
Q Consensus 473 ---gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~~~ 525 (631)
|++.+++.. .....++......++.+++.+ +.++++|||+++......
T Consensus 80 ~~~~~l~~~~~~---~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~-- 154 (255)
T cd08219 80 CDGGDLMQKIKL---QRGKLFPEDTILQWFVQMCLGVQHIHEKRVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPG-- 154 (255)
T ss_pred CCCCcHHHHHHh---ccCCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEECCCCcEEEcccCcceeecccc--
Confidence 444444421 122346666677777776654 457899999998764221
Q ss_pred ccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHH-HhHh-hhcCChhHHHHHH
Q 042825 526 SILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLAT-WFQK-MHKNHDTFQMAID 603 (631)
Q Consensus 526 ~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~-~~~~-~~~~~~~l~~~id 603 (631)
.......|+..|+|||+..+..++.++||||||+++|||++|+.||........ ...+.. .... ....+..+.+++.
T Consensus 155 ~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~li~ 233 (255)
T cd08219 155 AYACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSWKNL-ILKVCQGSYKPLPSHYSYELRSLIK 233 (255)
T ss_pred cccccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCHHHH-HHHHhcCCCCCCCcccCHHHHHHHH
Confidence 122345789999999999888899999999999999999999999985432111 111111 0000 0112457899999
Q ss_pred hhcCCChhhHHhHHHHHHHH
Q 042825 604 KTIQLDEENLANVSTVAELG 623 (631)
Q Consensus 604 ~~L~~d~~~r~~~~~vl~la 623 (631)
+++..+|++||++.+++..+
T Consensus 234 ~~l~~~P~~Rp~~~~il~~~ 253 (255)
T cd08219 234 QMFKRNPRSRPSATTILSRG 253 (255)
T ss_pred HHHhCCcccCCCHHHHhhcc
Confidence 99999999999999988754
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati |
| >cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.9e-19 Score=180.62 Aligned_cols=192 Identities=24% Similarity=0.343 Sum_probs=136.7
Q ss_pred eeecCCCceEEEEEEecCCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc----------------------------CCh
Q 042825 424 NRLGRGGVGTVYKGELKDGTEVGVKRMELGSVTEQGIAQFESEITVLTK----------------------------GTL 475 (631)
Q Consensus 424 ~~iG~G~fg~Vyk~~~~~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~----------------------------gsL 475 (631)
++||+|+||.||+|..++++.+|+|++.... .......|.+|++++.+ +++
T Consensus 1 ~~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 79 (250)
T cd05085 1 ELLGKGNFGEVFKGTLKDKTPVAVKTCKEDL-PQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGDF 79 (250)
T ss_pred CccCCCCCceEEEEEecCCcEEEEEecCCcC-CHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCcH
Confidence 3689999999999998889999999886543 33445678899988765 445
Q ss_pred hHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCCcccccccc
Q 042825 476 GRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENGKHSILTKV 531 (631)
Q Consensus 476 ~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~~~~~~~~~ 531 (631)
.+++. .....+++.....++.+++.+ +.+||+|||+++..... ........
T Consensus 80 ~~~~~----~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~-~~~~~~~~ 154 (250)
T cd05085 80 LSFLR----KKKDELKTKQLVKFALDAAAGMAYLESKNCIHRDLAARNCLVGENNVLKISDFGMSRQEDDG-IYSSSGLK 154 (250)
T ss_pred HHHHH----hcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccChheEEEcCCCeEEECCCccceecccc-ccccCCCC
Confidence 44442 222357888888888777654 34689999999765321 11111223
Q ss_pred ccCcccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChHHHHHHHHHhH--hhhcCChhHHHHHHhhcCC
Q 042825 532 AGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT-GRKVVDATHSDPEYIIHLATWFQ--KMHKNHDTFQMAIDKTIQL 608 (631)
Q Consensus 532 ~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~Ellt-G~~P~~~~~~~~~~~~~l~~~~~--~~~~~~~~l~~~id~~L~~ 608 (631)
.++..|+|||+..+..++.++|||||||++||+++ |..||....... ....+..-.. .....+.++.+++.+++..
T Consensus 155 ~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~ 233 (250)
T cd05085 155 QIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQ-AREQVEKGYRMSCPQKCPDDVYKVMQRCWDY 233 (250)
T ss_pred CCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHH-HHHHHHcCCCCCCCCCCCHHHHHHHHHHccc
Confidence 45678999999988889999999999999999999 999997553221 1111111000 0112346899999999999
Q ss_pred ChhhHHhHHHHHHH
Q 042825 609 DEENLANVSTVAEL 622 (631)
Q Consensus 609 d~~~r~~~~~vl~l 622 (631)
+|++|+++.++++.
T Consensus 234 ~p~~Rp~~~~l~~~ 247 (250)
T cd05085 234 KPENRPKFSELQKE 247 (250)
T ss_pred CcccCCCHHHHHHH
Confidence 99999999998764
|
Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c |
| >cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1 | Back alignment and domain information |
|---|
Probab=99.82 E-value=2.2e-19 Score=185.37 Aligned_cols=191 Identities=19% Similarity=0.335 Sum_probs=140.9
Q ss_pred CCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc------------------------
Q 042825 418 NNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK------------------------ 472 (631)
Q Consensus 418 ~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~------------------------ 472 (631)
.+|+..+.||+|+||.||+|+.. +++.||+|.+...... ..+.+.+|+.++..
T Consensus 20 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~--~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv~e 97 (296)
T cd06654 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQP--KKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVME 97 (296)
T ss_pred cceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcc--hHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEeec
Confidence 57888899999999999999864 6899999998765432 34668888887765
Q ss_pred ----CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCCc
Q 042825 473 ----GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENGK 524 (631)
Q Consensus 473 ----gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~~ 524 (631)
++|.+++.. ..+.+.+...++.+++.+ +.+||+|||+++......
T Consensus 98 ~~~~~~L~~~~~~------~~~~~~~~~~i~~ql~~aL~~LH~~gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~- 170 (296)
T cd06654 98 YLAGGSLTDVVTE------TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ- 170 (296)
T ss_pred ccCCCCHHHHHHh------cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCEEECccccchhccccc-
Confidence 445544421 246777888888777765 457899999988653221
Q ss_pred cccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHhHh-------hhcCChh
Q 042825 525 HSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQK-------MHKNHDT 597 (631)
Q Consensus 525 ~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~~~-------~~~~~~~ 597 (631)
.......|++.|+|||++.+..++.++|||||||++|||++|+.||....... . +..+... .......
T Consensus 171 -~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~--~--~~~~~~~~~~~~~~~~~~~~~ 245 (296)
T cd06654 171 -SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLR--A--LYLIATNGTPELQNPEKLSAI 245 (296)
T ss_pred -cccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHH--h--HHHHhcCCCCCCCCccccCHH
Confidence 12234578999999999988889999999999999999999999997543321 1 1111111 1112356
Q ss_pred HHHHHHhhcCCChhhHHhHHHHHHH
Q 042825 598 FQMAIDKTIQLDEENLANVSTVAEL 622 (631)
Q Consensus 598 l~~~id~~L~~d~~~r~~~~~vl~l 622 (631)
+.+++.+++..+|++|+++.++++.
T Consensus 246 l~~li~~~l~~~p~~Rpt~~eil~~ 270 (296)
T cd06654 246 FRDFLNRCLDMDVEKRGSAKELLQH 270 (296)
T ss_pred HHHHHHHHCcCCcccCcCHHHHhhC
Confidence 8999999999999999999988763
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3 | Back alignment and domain information |
|---|
Probab=99.82 E-value=2.2e-19 Score=182.17 Aligned_cols=198 Identities=19% Similarity=0.284 Sum_probs=137.9
Q ss_pred CCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCC---CHHHHHHHHHHHHHHhc---------------------
Q 042825 418 NNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSV---TEQGIAQFESEITVLTK--------------------- 472 (631)
Q Consensus 418 ~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~---~~~~~~~~~~Ei~~l~~--------------------- 472 (631)
.+|...+.||+|+||.||+|... ++..||+|++..... ..+..+.+.+|++++.+
T Consensus 2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (266)
T cd06651 2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTL 81 (266)
T ss_pred CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEE
Confidence 46888999999999999999865 589999999865432 22345678889888776
Q ss_pred ---------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeecccccc
Q 042825 473 ---------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLV 519 (631)
Q Consensus 473 ---------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~ 519 (631)
++|.+++.. ...+++.....++.+++.+ ..+||+|||+++.+
T Consensus 82 ~l~~e~~~~~~L~~~l~~-----~~~l~~~~~~~~~~qi~~~l~~LH~~~i~H~~l~p~nil~~~~~~~~l~dfg~~~~~ 156 (266)
T cd06651 82 TIFMEYMPGGSVKDQLKA-----YGALTESVTRKYTRQILEGMSYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRL 156 (266)
T ss_pred EEEEeCCCCCcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEccCCCcccc
Confidence 233333321 2346777777788777765 35789999999865
Q ss_pred CCCCc-cccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHhHh---hhcCC
Q 042825 520 PENGK-HSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQK---MHKNH 595 (631)
Q Consensus 520 ~~~~~-~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~~~---~~~~~ 595 (631)
..... ........++..|+|||++.+..++.++|||||||++|||++|+.||....... ....+..+... .....
T Consensus 157 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~ 235 (266)
T cd06651 157 QTICMSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAMA-AIFKIATQPTNPQLPSHIS 235 (266)
T ss_pred ccccccCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccchHH-HHHHHhcCCCCCCCchhcC
Confidence 32111 111233568999999999988889999999999999999999999997543221 11122111110 11124
Q ss_pred hhHHHHHHhhcCCChhhHHhHHHHHHH
Q 042825 596 DTFQMAIDKTIQLDEENLANVSTVAEL 622 (631)
Q Consensus 596 ~~l~~~id~~L~~d~~~r~~~~~vl~l 622 (631)
+.+++++ .++..+|++|+++.++++.
T Consensus 236 ~~~~~li-~~~~~~p~~Rp~~~eil~h 261 (266)
T cd06651 236 EHARDFL-GCIFVEARHRPSAEELLRH 261 (266)
T ss_pred HHHHHHH-HHhcCChhhCcCHHHHhcC
Confidence 5678888 5665799999999998753
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development |
| >KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.82 E-value=4.9e-20 Score=192.37 Aligned_cols=201 Identities=20% Similarity=0.298 Sum_probs=141.8
Q ss_pred HHhhcCCcccceeecCCCceEEEEEEecC-CcEEEEEEEecCCCCHHHHHHHHHHHHHHhc-------------------
Q 042825 413 LRNATNNFSEENRLGRGGVGTVYKGELKD-GTEVGVKRMELGSVTEQGIAQFESEITVLTK------------------- 472 (631)
Q Consensus 413 l~~~t~~f~~~~~iG~G~fg~Vyk~~~~~-g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~------------------- 472 (631)
++-..-+....++||-|.||.||.|.|+. .-.||||.++.+. ...++|+.|..+|+.
T Consensus 262 WEmeRtdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDt---MeveEFLkEAAvMKeikHpNLVqLLGVCT~EpPF 338 (1157)
T KOG4278|consen 262 WEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT---MEVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPPF 338 (1157)
T ss_pred hhccchheeeeeccCCCcccceeeeeeeccceeeehhhhhhcc---hhHHHHHHHHHHHHhhcCccHHHHhhhhccCCCe
Confidence 33333455667899999999999999985 6789999998754 367899999999876
Q ss_pred ---------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeecccccc
Q 042825 473 ---------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLV 519 (631)
Q Consensus 473 ---------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~ 519 (631)
|+|-+||.+..++.. .-.-.+.+|.||+.+ ..+||+|||++|++
T Consensus 339 YIiTEfM~yGNLLdYLRecnr~ev---~avvLlyMAtQIsSaMeYLEkknFIHRDLAARNCLVgEnhiVKvADFGLsRlM 415 (1157)
T KOG4278|consen 339 YIITEFMCYGNLLDYLRECNRSEV---PAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHIVKVADFGLSRLM 415 (1157)
T ss_pred EEEEecccCccHHHHHHHhchhhc---chhHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhccccccceEEeeccchhhhh
Confidence 888888875433322 222233344444333 33689999999999
Q ss_pred CCCCccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChHHHHHHHHHhHhhhcC--Ch
Q 042825 520 PENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT-GRKVVDATHSDPEYIIHLATWFQKMHKN--HD 596 (631)
Q Consensus 520 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~Ellt-G~~P~~~~~~~~~~~~~l~~~~~~~~~~--~~ 596 (631)
..+ +........=++.|.|||.+....|+.|+|||+|||+|||+.| |..||.+......+. -+.+-.+.--++ .+
T Consensus 416 tgD-TYTAHAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGidlSqVY~-LLEkgyRM~~PeGCPp 493 (1157)
T KOG4278|consen 416 TGD-TYTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYG-LLEKGYRMDGPEGCPP 493 (1157)
T ss_pred cCC-ceecccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCccHHHHHH-HHhccccccCCCCCCH
Confidence 633 3323333445789999999999999999999999999999999 999998764322111 122222211111 35
Q ss_pred hHHHHHHhhcCCChhhHHhHHHHHH
Q 042825 597 TFQMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 597 ~l~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
.+-++...|++..|.+||++.++-+
T Consensus 494 kVYeLMraCW~WsPsDRPsFaeiHq 518 (1157)
T KOG4278|consen 494 KVYELMRACWNWSPSDRPSFAEIHQ 518 (1157)
T ss_pred HHHHHHHHHhcCCcccCccHHHHHH
Confidence 6788999999999999998887654
|
|
| >cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8 | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.7e-19 Score=187.82 Aligned_cols=195 Identities=22% Similarity=0.324 Sum_probs=129.5
Q ss_pred ceeecCCCceEEEEEEec---CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc---------------------------
Q 042825 423 ENRLGRGGVGTVYKGELK---DGTEVGVKRMELGSVTEQGIAQFESEITVLTK--------------------------- 472 (631)
Q Consensus 423 ~~~iG~G~fg~Vyk~~~~---~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~--------------------------- 472 (631)
.++||+|+||+||+|+.+ +++.||+|.+..... ...+.+|++++.+
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~~----~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~ 81 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGI----SMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDY 81 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCCC----cHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEec
Confidence 468999999999999865 467899999875432 2346778888776
Q ss_pred --CChhHHhHhhhh----cCCCCCCHHHHHHHHHHhhcC----------------------------CCcEEEeeccccc
Q 042825 473 --GTLGRHLFNWEE----EGLEPLEWNTRLNIALDVARG----------------------------DDMRVADFGLVRL 518 (631)
Q Consensus 473 --gsL~~~L~~~~~----~~~~~L~~~~~~~I~~~ia~g----------------------------~~~kl~DFGla~~ 518 (631)
+++..++..... .....+++.....++.+++.| +.+||+|||+++.
T Consensus 82 ~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a~~ 161 (317)
T cd07868 82 AEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARL 161 (317)
T ss_pred cCCCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEecCCCCcCcEEEeecCceec
Confidence 222222211000 011246666677777777765 2578999999987
Q ss_pred cCCCCcc-ccccccccCcccccccccccC-CCCchhhHHHHHHHHHHHHcCCCCCCCCCCCh--------HHHHHHH---
Q 042825 519 VPENGKH-SILTKVAGTFGYLAPEYIVTG-RITAKVDVYSFGMILMDLITGRKVVDATHSDP--------EYIIHLA--- 585 (631)
Q Consensus 519 ~~~~~~~-~~~~~~~gt~~Y~aPE~~~~~-~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~--------~~~~~l~--- 585 (631)
....... .......||+.|+|||++.+. .++.++||||+||++|||++|+.||.....+. .....+.
T Consensus 162 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (317)
T cd07868 162 FNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVM 241 (317)
T ss_pred cCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCCcccccccccccHHHHHHHHHhc
Confidence 6422111 123456789999999998764 58999999999999999999999997433210 0000000
Q ss_pred ------HHhH----------------h--------------hhcCChhHHHHHHhhcCCChhhHHhHHHHHH
Q 042825 586 ------TWFQ----------------K--------------MHKNHDTFQMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 586 ------~~~~----------------~--------------~~~~~~~l~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
.|-. . ....+.++.+++.++|..||.+|+++.++++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~t~~e~l~ 313 (317)
T cd07868 242 GFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQ 313 (317)
T ss_pred CCCChHHhHHHhhccchhhhhhhhhccccCcccccchHHhcCCCCChHHHHHHHHHhccCcccCCCHHHHhc
Confidence 0100 0 0011235788999999999999999998875
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p |
| >cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2 | Back alignment and domain information |
|---|
Probab=99.82 E-value=4.9e-20 Score=192.44 Aligned_cols=185 Identities=21% Similarity=0.218 Sum_probs=124.7
Q ss_pred eeecCCCceEEEEEEec-CCcEEEEEEEecCCC-CHHHHHHHHHHHHH-Hhc----------------------------
Q 042825 424 NRLGRGGVGTVYKGELK-DGTEVGVKRMELGSV-TEQGIAQFESEITV-LTK---------------------------- 472 (631)
Q Consensus 424 ~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~-~~~~~~~~~~Ei~~-l~~---------------------------- 472 (631)
++||+|+||.||+|+.. +++.||+|++..... ......++..|... +..
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNG 80 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 47999999999999975 588999999975422 12233455566543 322
Q ss_pred CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCCccccc
Q 042825 473 GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENGKHSIL 528 (631)
Q Consensus 473 gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~~~~~~ 528 (631)
|+|..++.. ...+.......++.+++.| +.+||+|||+++..... ....
T Consensus 81 ~~L~~~l~~-----~~~~~~~~~~~~~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~--~~~~ 153 (321)
T cd05603 81 GELFFHLQR-----ERCFLEPRARFYAAEVASAIGYLHSLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGVEP--EETT 153 (321)
T ss_pred CCHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEccCCCCccCCCC--CCcc
Confidence 344443321 1335555555666666654 56889999999754211 1223
Q ss_pred cccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHh-HhhhcCChhHHHHHHhhcC
Q 042825 529 TKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWF-QKMHKNHDTFQMAIDKTIQ 607 (631)
Q Consensus 529 ~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~-~~~~~~~~~l~~~id~~L~ 607 (631)
....||+.|+|||++.+..++.++|||||||++|||++|+.||....... ....+.... ........++.+++.++|+
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~li~~~l~ 232 (321)
T cd05603 154 STFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVSQ-MYDNILHKPLQLPGGKTVAACDLLVGLLH 232 (321)
T ss_pred ccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCHHH-HHHHHhcCCCCCCCCCCHHHHHHHHHHcc
Confidence 45679999999999988889999999999999999999999997643211 111111110 1111234578999999999
Q ss_pred CChhhHHhH
Q 042825 608 LDEENLANV 616 (631)
Q Consensus 608 ~d~~~r~~~ 616 (631)
.+|.+|++.
T Consensus 233 ~~p~~R~~~ 241 (321)
T cd05603 233 KDQRRRLGA 241 (321)
T ss_pred CCHhhcCCC
Confidence 999999764
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. |
| >cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2 | Back alignment and domain information |
|---|
Probab=99.82 E-value=4.5e-20 Score=195.95 Aligned_cols=196 Identities=18% Similarity=0.305 Sum_probs=135.5
Q ss_pred CCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCC-CHHHHHHHHHHHHHHhc-----------------------
Q 042825 418 NNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSV-TEQGIAQFESEITVLTK----------------------- 472 (631)
Q Consensus 418 ~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~-~~~~~~~~~~Ei~~l~~----------------------- 472 (631)
++|+..+.||+|+||+||+++.. +++.||||++..... .......+.+|++++.+
T Consensus 1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~ 80 (360)
T cd05627 1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIM 80 (360)
T ss_pred CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 46888999999999999999876 589999999975322 22344567788887754
Q ss_pred -----CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCC
Q 042825 473 -----GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENG 523 (631)
Q Consensus 473 -----gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~ 523 (631)
|+|.+++.. ...++......++.+++.| +.+||+|||+++.+....
T Consensus 81 E~~~gg~L~~~l~~-----~~~l~~~~~~~~~~qi~~~L~~lH~~givHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~~ 155 (360)
T cd05627 81 EFLPGGDMMTLLMK-----KDTLSEEATQFYIAETVLAIDAIHQLGFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAH 155 (360)
T ss_pred eCCCCccHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCCCEEEeeccCCccccccc
Confidence 556555532 2345666665666555544 568899999987542110
Q ss_pred c---------------------------------cccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCC
Q 042825 524 K---------------------------------HSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKV 570 (631)
Q Consensus 524 ~---------------------------------~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P 570 (631)
. .......+||+.|+|||++.+..++.++|||||||++|||++|+.|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~P 235 (360)
T cd05627 156 RTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPP 235 (360)
T ss_pred ccccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCCCC
Confidence 0 0011235799999999999999999999999999999999999999
Q ss_pred CCCCCCChHHHHHHHHHhHhh-----hcCChhHHHHHHhhcCCChhhHHh---HHHHH
Q 042825 571 VDATHSDPEYIIHLATWFQKM-----HKNHDTFQMAIDKTIQLDEENLAN---VSTVA 620 (631)
Q Consensus 571 ~~~~~~~~~~~~~l~~~~~~~-----~~~~~~l~~~id~~L~~d~~~r~~---~~~vl 620 (631)
|....... ....+..|.... ...+++++++|.+++ .+|.+|.. +.+++
T Consensus 236 f~~~~~~~-~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~ 291 (360)
T cd05627 236 FCSETPQE-TYRKVMNWKETLVFPPEVPISEKAKDLILRFC-TDSENRIGSNGVEEIK 291 (360)
T ss_pred CCCCCHHH-HHHHHHcCCCceecCCCCCCCHHHHHHHHHhc-cChhhcCCCCCHHHHh
Confidence 98654322 222233332111 123567899999877 48888874 55544
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul |
| >cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.82 E-value=2.1e-19 Score=185.21 Aligned_cols=203 Identities=21% Similarity=0.325 Sum_probs=142.6
Q ss_pred CCcccceeecCCCceEEEEEEecC---------------CcEEEEEEEecCCCCHHHHHHHHHHHHHHhc----------
Q 042825 418 NNFSEENRLGRGGVGTVYKGELKD---------------GTEVGVKRMELGSVTEQGIAQFESEITVLTK---------- 472 (631)
Q Consensus 418 ~~f~~~~~iG~G~fg~Vyk~~~~~---------------g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~---------- 472 (631)
++|+..+.||+|+||.||+++... ...||+|+++.. ........|.+|++++.+
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~ei~~l~~l~h~~i~~~~ 83 (295)
T cd05097 5 QQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRAD-VTKTARNDFLKEIKIMSRLKNPNIIRLL 83 (295)
T ss_pred HhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCC-CCHHHHHHHHHHHHHHHhCCCCCcCeEE
Confidence 468888999999999999987542 235899998754 234456779999998876
Q ss_pred ------------------CChhHHhHhhhh-------cCCCCCCHHHHHHHHHHhhcC----------------------
Q 042825 473 ------------------GTLGRHLFNWEE-------EGLEPLEWNTRLNIALDVARG---------------------- 505 (631)
Q Consensus 473 ------------------gsL~~~L~~~~~-------~~~~~L~~~~~~~I~~~ia~g---------------------- 505 (631)
++|.+++..... .....+.|...+.++.++++|
T Consensus 84 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nill~ 163 (295)
T cd05097 84 GVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLNFVHRDLATRNCLVG 163 (295)
T ss_pred EEEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcCeeccccChhhEEEc
Confidence 566666643110 011246888888888888865
Q ss_pred --CCcEEEeeccccccCCCCccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHc--CCCCCCCCCCChHHH
Q 042825 506 --DDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT--GRKVVDATHSDPEYI 581 (631)
Q Consensus 506 --~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~Ellt--G~~P~~~~~~~~~~~ 581 (631)
..+||+|||+++...............++..|+|||+.....++.++|||||||++|||++ |..||....... ..
T Consensus 164 ~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~~~-~~ 242 (295)
T cd05097 164 NHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLLSDEQ-VI 242 (295)
T ss_pred CCCcEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcccChHH-HH
Confidence 3578999999987643222222233456789999999988889999999999999999998 667776543221 11
Q ss_pred HHHHHHhHh---------hhcCChhHHHHHHhhcCCChhhHHhHHHHHHH
Q 042825 582 IHLATWFQK---------MHKNHDTFQMAIDKTIQLDEENLANVSTVAEL 622 (631)
Q Consensus 582 ~~l~~~~~~---------~~~~~~~l~~~id~~L~~d~~~r~~~~~vl~l 622 (631)
......... ....+..+.+++.+|+..+|++||++.++++.
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~~ 292 (295)
T cd05097 243 ENTGEFFRNQGRQIYLSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHHF 292 (295)
T ss_pred HHHHHhhhhccccccCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHH
Confidence 111111110 11123678999999999999999999998765
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including |
| >cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase | Back alignment and domain information |
|---|
Probab=99.81 E-value=5.3e-19 Score=181.01 Aligned_cols=198 Identities=21% Similarity=0.321 Sum_probs=141.5
Q ss_pred CcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc-------------------------
Q 042825 419 NFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK------------------------- 472 (631)
Q Consensus 419 ~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~------------------------- 472 (631)
+|+..+.||+|+||.||+|+.. +|+.||||++..........+.+.+|+.++++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~ 80 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVMEY 80 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEecc
Confidence 4778899999999999999975 68999999998765444456778899988766
Q ss_pred --CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCCccc
Q 042825 473 --GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENGKHS 526 (631)
Q Consensus 473 --gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~~~~ 526 (631)
++|.+++.. ....+++.....++.+++++ +.++|+|||+++....... .
T Consensus 81 ~~~~L~~~~~~----~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~~-~ 155 (286)
T cd07832 81 MPSDLSEVLRD----EERPLPEAQVKSYMRMLLKGVAYMHANGIMHRDLKPANLLISADGVLKIADFGLARLFSEEEP-R 155 (286)
T ss_pred cCCCHHHHHHh----cCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCHHHEEEcCCCcEEEeeeeecccccCCCC-C
Confidence 344444422 22457888888888877765 4578999999987643221 1
Q ss_pred cccccccCcccccccccccC-CCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHH--------HHh---------
Q 042825 527 ILTKVAGTFGYLAPEYIVTG-RITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLA--------TWF--------- 588 (631)
Q Consensus 527 ~~~~~~gt~~Y~aPE~~~~~-~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~--------~~~--------- 588 (631)
......|+..|+|||++.+. .++.++||||+||++|||+||++||.+..........+. .|.
T Consensus 156 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (286)
T cd07832 156 LYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLAIVFRTLGTPNEETWPGLTSLPDYN 235 (286)
T ss_pred ccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHHHHHHHHHcCCCChHHHhhccCcchhh
Confidence 23345789999999998654 468999999999999999999888865432111111010 010
Q ss_pred -------------HhhhcCChhHHHHHHhhcCCChhhHHhHHHHHH
Q 042825 589 -------------QKMHKNHDTFQMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 589 -------------~~~~~~~~~l~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
.........+.+++.+|+..+|.+|+++.++++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~ 281 (286)
T cd07832 236 KITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALR 281 (286)
T ss_pred cccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhh
Confidence 000122467889999999999999999998875
|
Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea |
| >PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=99.81 E-value=6.7e-20 Score=184.68 Aligned_cols=194 Identities=26% Similarity=0.439 Sum_probs=142.3
Q ss_pred cccceeecCCCceEEEEEEecC-CcEEEEEEEecCCCCHHHHHHHHHHHHHHhc--------------------------
Q 042825 420 FSEENRLGRGGVGTVYKGELKD-GTEVGVKRMELGSVTEQGIAQFESEITVLTK-------------------------- 472 (631)
Q Consensus 420 f~~~~~iG~G~fg~Vyk~~~~~-g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~-------------------------- 472 (631)
|+..+.||+|+||+||+++... ++.||+|++..............+|+.++.+
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~~ 80 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEYC 80 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhcccccccccccccccccccccccccccccc
Confidence 5677899999999999999764 7799999998765433333344557777665
Q ss_pred --CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCCccc
Q 042825 473 --GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENGKHS 526 (631)
Q Consensus 473 --gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~~~~ 526 (631)
++|.+++. ....+++.....++.+++++ +.++|+|||.+.... ....
T Consensus 81 ~~~~L~~~l~-----~~~~~~~~~~~~~~~qi~~~L~~Lh~~~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~--~~~~ 153 (260)
T PF00069_consen 81 PGGSLQDYLQ-----KNKPLSEEEILKIAYQILEALAYLHSKGIVHRDIKPENILLDENGEVKLIDFGSSVKLS--ENNE 153 (260)
T ss_dssp TTEBHHHHHH-----HHSSBBHHHHHHHHHHHHHHHHHHHHTTEEESSBSGGGEEESTTSEEEESSGTTTEEST--STTS
T ss_pred cccccccccc-----ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc--cccc
Confidence 36766664 12457888888888888876 456899999997641 1122
Q ss_pred cccccccCcccccccccc-cCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHh----Hhhhc----CChh
Q 042825 527 ILTKVAGTFGYLAPEYIV-TGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWF----QKMHK----NHDT 597 (631)
Q Consensus 527 ~~~~~~gt~~Y~aPE~~~-~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~----~~~~~----~~~~ 597 (631)
......++..|+|||+.. +..++.++||||+|+++|||++|+.||....... ....+..-. ..... ...+
T Consensus 154 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (260)
T PF00069_consen 154 NFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDD-QLEIIEKILKRPLPSSSQQSREKSEE 232 (260)
T ss_dssp EBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHH-HHHHHHHHHHTHHHHHTTSHTTSHHH
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccchh-hhhhhhhcccccccccccccchhHHH
Confidence 345677899999999998 7889999999999999999999999998652111 111111111 11111 1268
Q ss_pred HHHHHHhhcCCChhhHHhHHHHHH
Q 042825 598 FQMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 598 l~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
+.+++.++|..||.+|+++.++++
T Consensus 233 l~~li~~~l~~~p~~R~~~~~l~~ 256 (260)
T PF00069_consen 233 LRDLIKKMLSKDPEQRPSAEELLK 256 (260)
T ss_dssp HHHHHHHHSSSSGGGSTTHHHHHT
T ss_pred HHHHHHHHccCChhHCcCHHHHhc
Confidence 999999999999999999998875
|
Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A .... |
| >cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.81 E-value=4.3e-19 Score=181.52 Aligned_cols=196 Identities=20% Similarity=0.276 Sum_probs=137.7
Q ss_pred cccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc--------------------------
Q 042825 420 FSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK-------------------------- 472 (631)
Q Consensus 420 f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~-------------------------- 472 (631)
|+..+.||+|++|.||+|+.. +|..||+|++............+.+|++++.+
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~~ 80 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEFL 80 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEecc
Confidence 566789999999999999865 69999999997654333334567888888865
Q ss_pred -CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCCcccc
Q 042825 473 -GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENGKHSI 527 (631)
Q Consensus 473 -gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~~~~~ 527 (631)
+++.+++.. .....+++.....++.+++++ +.++|+|||+++...... ..
T Consensus 81 ~~~l~~~~~~---~~~~~~~~~~~~~~~~~i~~~L~~lH~~~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~--~~ 155 (283)
T cd07835 81 DLDLKKYMDS---SPLTGLDPPLIKSYLYQLLQGIAYCHSHRVLHRDLKPQNLLIDREGALKLADFGLARAFGVPV--RT 155 (283)
T ss_pred CcCHHHHHhh---CCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcCCCcEEEeecccccccCCCc--cc
Confidence 233333321 111358899989988888765 457899999998653221 12
Q ss_pred ccccccCcccccccccccC-CCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHH------------------h
Q 042825 528 LTKVAGTFGYLAPEYIVTG-RITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATW------------------F 588 (631)
Q Consensus 528 ~~~~~gt~~Y~aPE~~~~~-~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~------------------~ 588 (631)
.....++..|+|||++.+. .++.++|||||||++|||++|+.||....... ....+..+ .
T Consensus 156 ~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (283)
T cd07835 156 YTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEID-QLFRIFRTLGTPDEDVWPGVTSLPDYK 234 (283)
T ss_pred cCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHhCCCChHHhhhhhhchhhh
Confidence 2334578899999987654 57899999999999999999999997543211 11111110 0
Q ss_pred H------------hhhcCChhHHHHHHhhcCCChhhHHhHHHHHH
Q 042825 589 Q------------KMHKNHDTFQMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 589 ~------------~~~~~~~~l~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
. .....+..+.+++.+|+..+|.+|+++.++++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~ 279 (283)
T cd07835 235 PTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQ 279 (283)
T ss_pred hhcccccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence 0 01112357889999999999999999998764
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc |
| >cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin | Back alignment and domain information |
|---|
Probab=99.81 E-value=2.2e-19 Score=184.62 Aligned_cols=207 Identities=22% Similarity=0.258 Sum_probs=144.3
Q ss_pred cCHHHHHhhcCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc--------------
Q 042825 408 IPIQVLRNATNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK-------------- 472 (631)
Q Consensus 408 ~~~~~l~~~t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~-------------- 472 (631)
++++++.+++++|...+.||+|+||.||++... +++.+|+|.+..... ....+.+|+.++.+
T Consensus 12 ~~~~~~~~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~~---~~~~~~~e~~~l~~l~~h~ni~~~~~~~ 88 (291)
T cd06639 12 LGLESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPISD---VDEEIEAEYNILQSLPNHPNVVKFYGMF 88 (291)
T ss_pred hhcccCCCCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEeccccc---HHHHHHHHHHHHHHhcCCCCeEEEEEEE
Confidence 455677788999999999999999999999975 588999999865321 22445666665543
Q ss_pred --------------------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCc
Q 042825 473 --------------------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDM 508 (631)
Q Consensus 473 --------------------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~ 508 (631)
++|.+++.... .....+.+.....++.+++.+ +.+
T Consensus 89 ~~~~~~~~~~~~lv~ey~~~~sL~~~~~~~~-~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~nili~~~~~~ 167 (291)
T cd06639 89 YKADKLVGGQLWLVLELCNGGSVTELVKGLL-ICGQRLDEAMISYILYGALLGLQHLHNNRIIHRDVKGNNILLTTEGGV 167 (291)
T ss_pred EeccccCCCeeEEEEEECCCCcHHHHHHHhh-hcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCCCE
Confidence 34444443211 123457888888888887765 457
Q ss_pred EEEeeccccccCCCCccccccccccCcccccccccccC-----CCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHH
Q 042825 509 RVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTG-----RITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIH 583 (631)
Q Consensus 509 kl~DFGla~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-----~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~ 583 (631)
||+|||+++...... .......|+..|+|||++... .++.++|||||||++|||++|+.||....... ....
T Consensus 168 kl~dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~-~~~~ 244 (291)
T cd06639 168 KLVDFGVSAQLTSTR--LRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVK-TLFK 244 (291)
T ss_pred EEeecccchhccccc--ccccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHHH-HHHH
Confidence 899999998764221 112335688999999997543 36889999999999999999999997543211 1111
Q ss_pred HHHHhHhhh----cCChhHHHHHHhhcCCChhhHHhHHHHHH
Q 042825 584 LATWFQKMH----KNHDTFQMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 584 l~~~~~~~~----~~~~~l~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
+..+..... .....+.+++.+|+..+|++|+++.++++
T Consensus 245 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 286 (291)
T cd06639 245 IPRNPPPTLLHPEKWCRSFNHFISQCLIKDFEARPSVTHLLE 286 (291)
T ss_pred HhcCCCCCCCcccccCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence 111111111 12346889999999999999999998875
|
Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre |
| >cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase | Back alignment and domain information |
|---|
Probab=99.81 E-value=3.9e-19 Score=180.40 Aligned_cols=200 Identities=19% Similarity=0.292 Sum_probs=140.1
Q ss_pred HHhhcCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc-------------------
Q 042825 413 LRNATNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK------------------- 472 (631)
Q Consensus 413 l~~~t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~------------------- 472 (631)
++.+++++.....||+|+||.||+|+.. ++..||+|.+.... ....+.+.+|++++++
T Consensus 3 ~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~ 80 (268)
T cd06624 3 YEYEYDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERD--SRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFF 80 (268)
T ss_pred cccccccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCC--HHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEE
Confidence 4567788888899999999999999965 57889999886543 3355678899888775
Q ss_pred ---------CChhHHhHhhhhcCCCCC--CHHHHHHHHHHhhcC-------------------------CCcEEEeeccc
Q 042825 473 ---------GTLGRHLFNWEEEGLEPL--EWNTRLNIALDVARG-------------------------DDMRVADFGLV 516 (631)
Q Consensus 473 ---------gsL~~~L~~~~~~~~~~L--~~~~~~~I~~~ia~g-------------------------~~~kl~DFGla 516 (631)
++|.+++.. ....+ ++.....++.+++++ +.++|+|||++
T Consensus 81 ~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~h~dl~p~nil~~~~~~~~~l~dfg~~ 156 (268)
T cd06624 81 KIFMEQVPGGSLSALLRS----KWGPLKDNEQTIIFYTKQILEGLKYLHDNQIVHRDIKGDNVLVNTYSGVVKISDFGTS 156 (268)
T ss_pred EEEEecCCCCCHHHHHHH----hcccCCCcHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCeEEEecchhh
Confidence 456555542 11223 556666666666654 35789999999
Q ss_pred cccCCCCccccccccccCcccccccccccCC--CCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHhHh----
Q 042825 517 RLVPENGKHSILTKVAGTFGYLAPEYIVTGR--ITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQK---- 590 (631)
Q Consensus 517 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~--~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~~~---- 590 (631)
....... .......|+..|+|||++.... ++.++|||||||++|||++|+.||............. .....
T Consensus 157 ~~~~~~~--~~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~~~~~-~~~~~~~~~ 233 (268)
T cd06624 157 KRLAGIN--PCTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAAMFKV-GMFKIHPEI 233 (268)
T ss_pred eecccCC--CccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhhhHhhh-hhhccCCCC
Confidence 7653211 1223346899999999986543 7899999999999999999999997543221111111 10000
Q ss_pred hhcCChhHHHHHHhhcCCChhhHHhHHHHHH
Q 042825 591 MHKNHDTFQMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 591 ~~~~~~~l~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
.....+++.+++.+++..+|.+|+++.++++
T Consensus 234 ~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~ 264 (268)
T cd06624 234 PESLSAEAKNFILRCFEPDPDKRASAHDLLQ 264 (268)
T ss_pred CcccCHHHHHHHHHHcCCCchhCCCHHHHHh
Confidence 0112457899999999999999999998765
|
Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina |
| >cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4 | Back alignment and domain information |
|---|
Probab=99.81 E-value=2.1e-19 Score=187.10 Aligned_cols=208 Identities=23% Similarity=0.299 Sum_probs=146.0
Q ss_pred CCcccceeecCCCceEEEEEEec--------CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc-----------------
Q 042825 418 NNFSEENRLGRGGVGTVYKGELK--------DGTEVGVKRMELGSVTEQGIAQFESEITVLTK----------------- 472 (631)
Q Consensus 418 ~~f~~~~~iG~G~fg~Vyk~~~~--------~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~----------------- 472 (631)
++|...+.||+|+||.||+++.. ....+|+|.++... ......++.+|++++.+
T Consensus 12 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~ 90 (314)
T cd05099 12 DRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNA-TDKDLADLISEMELMKLIGKHKNIINLLGVCTQE 90 (314)
T ss_pred HHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCC-ChHHHHHHHHHHHHHHhccCCCCeeeEEEEEccC
Confidence 46778899999999999999742 24579999887543 33456678889887753
Q ss_pred ------------CChhHHhHhhhh-----------cCCCCCCHHHHHHHHHHhhcC------------------------
Q 042825 473 ------------GTLGRHLFNWEE-----------EGLEPLEWNTRLNIALDVARG------------------------ 505 (631)
Q Consensus 473 ------------gsL~~~L~~~~~-----------~~~~~L~~~~~~~I~~~ia~g------------------------ 505 (631)
|+|.+++..... .....+.|.....++.+++.+
T Consensus 91 ~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill~~~ 170 (314)
T cd05099 91 GPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRRCIHRDLAARNVLVTED 170 (314)
T ss_pred CceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCCeeeccccceeEEEcCC
Confidence 567666654211 012358888888888887765
Q ss_pred CCcEEEeeccccccCCCCccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChHHHHHH
Q 042825 506 DDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT-GRKVVDATHSDPEYIIHL 584 (631)
Q Consensus 506 ~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~Ellt-G~~P~~~~~~~~~~~~~l 584 (631)
+.+||+|||+++...............++..|+|||++.+..++.++|||||||++|||++ |+.||......+ ....+
T Consensus 171 ~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~-~~~~~ 249 (314)
T cd05099 171 NVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPVEE-LFKLL 249 (314)
T ss_pred CcEEEccccccccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCCHHH-HHHHH
Confidence 4578999999987642211111222334568999999988889999999999999999999 899997543221 11112
Q ss_pred HHHhH--hhhcCChhHHHHHHhhcCCChhhHHhHHHHHHHHHhhh
Q 042825 585 ATWFQ--KMHKNHDTFQMAIDKTIQLDEENLANVSTVAELGDHCC 627 (631)
Q Consensus 585 ~~~~~--~~~~~~~~l~~~id~~L~~d~~~r~~~~~vl~lal~C~ 627 (631)
..... .......++.+++.+|+..+|++|+++.++++....+.
T Consensus 250 ~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~ 294 (314)
T cd05099 250 REGHRMDKPSNCTHELYMLMRECWHAVPTQRPTFKQLVEALDKVL 294 (314)
T ss_pred HcCCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHH
Confidence 22111 11122357899999999999999999999988766554
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4 | Back alignment and domain information |
|---|
Probab=99.81 E-value=2.9e-19 Score=180.94 Aligned_cols=197 Identities=20% Similarity=0.341 Sum_probs=140.0
Q ss_pred CcccceeecCCCceEEEEEEecCCcEEEEEEEecCCC----CHHHHHHHHHHHHHHhc----------------------
Q 042825 419 NFSEENRLGRGGVGTVYKGELKDGTEVGVKRMELGSV----TEQGIAQFESEITVLTK---------------------- 472 (631)
Q Consensus 419 ~f~~~~~iG~G~fg~Vyk~~~~~g~~vAvK~l~~~~~----~~~~~~~~~~Ei~~l~~---------------------- 472 (631)
+|...+.||+|+||+||+|...+|+.+|||.+..... .......+.+|++++++
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 80 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISIF 80 (265)
T ss_pred CccccceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEEE
Confidence 3667889999999999999988899999999875432 12344668889888765
Q ss_pred ------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCC
Q 042825 473 ------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPEN 522 (631)
Q Consensus 473 ------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~ 522 (631)
++|.+++.. ...+.+.....++.+++.+ +.++|+|||+++.....
T Consensus 81 ~e~~~~~~L~~~l~~-----~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~ 155 (265)
T cd06631 81 MEFVPGGSISSILNR-----FGPLPEPVFCKYTKQILDGVAYLHNNCVVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWV 155 (265)
T ss_pred EecCCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHhEEECCCCeEEeccchhhHhhhhc
Confidence 455555532 1346677666666666654 45789999998765311
Q ss_pred C----ccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHH---hH-hhhcC
Q 042825 523 G----KHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATW---FQ-KMHKN 594 (631)
Q Consensus 523 ~----~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~---~~-~~~~~ 594 (631)
. .........|+..|+|||+..+..++.++|||||||++|||++|+.||....... ....+... .. .....
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 234 (265)
T cd06631 156 GLHGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLA-AMFYIGAHRGLMPRLPDSF 234 (265)
T ss_pred cccccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChHH-HHHHhhhccCCCCCCCCCC
Confidence 1 1112234568999999999988889999999999999999999999997543221 11111111 00 11112
Q ss_pred ChhHHHHHHhhcCCChhhHHhHHHHHH
Q 042825 595 HDTFQMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 595 ~~~l~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
+.++.+++.+++..+|.+|+++.++++
T Consensus 235 ~~~~~~~i~~~l~~~p~~Rp~~~~~l~ 261 (265)
T cd06631 235 SAAAIDFVTSCLTRDQHERPSALQLLR 261 (265)
T ss_pred CHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 467899999999999999999998875
|
Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. |
| >cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2 | Back alignment and domain information |
|---|
Probab=99.81 E-value=3.8e-19 Score=183.60 Aligned_cols=199 Identities=17% Similarity=0.291 Sum_probs=143.7
Q ss_pred cCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc-----------------------
Q 042825 417 TNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK----------------------- 472 (631)
Q Consensus 417 t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~----------------------- 472 (631)
..+|+..+.||.|+||.||+|... +++.||+|.+...... ..+.+.+|+++++.
T Consensus 18 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~--~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 95 (296)
T cd06655 18 KKKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQP--KKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVM 95 (296)
T ss_pred cceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCc--hHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEE
Confidence 346888999999999999999854 6899999998754322 34667888888765
Q ss_pred -----CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCC
Q 042825 473 -----GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENG 523 (631)
Q Consensus 473 -----gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~ 523 (631)
++|.+++. ...+++.++..++.+++.+ +.+||+|||+++......
T Consensus 96 e~~~~~~L~~~~~------~~~l~~~~~~~i~~~l~~al~~LH~~~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~ 169 (296)
T cd06655 96 EYLAGGSLTDVVT------ETCMDEAQIAAVCRECLQALEFLHANQVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQ 169 (296)
T ss_pred EecCCCcHHHHHH------hcCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEccCccchhccccc
Confidence 44444442 1347888888888777654 467899999988664221
Q ss_pred ccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHhH---hhhcCChhHHH
Q 042825 524 KHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQ---KMHKNHDTFQM 600 (631)
Q Consensus 524 ~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~~---~~~~~~~~l~~ 600 (631)
.......|+..|+|||.+.+..++.++|||||||++|||++|+.||.................. .....+..+.+
T Consensus 170 --~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (296)
T cd06655 170 --SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQNPEKLSPIFRD 247 (296)
T ss_pred --ccCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCcccCCcccCCHHHHH
Confidence 1223456889999999998888999999999999999999999999865432111111111100 11122457899
Q ss_pred HHHhhcCCChhhHHhHHHHHHHHHh
Q 042825 601 AIDKTIQLDEENLANVSTVAELGDH 625 (631)
Q Consensus 601 ~id~~L~~d~~~r~~~~~vl~lal~ 625 (631)
++.+|+..+|.+|+++.++++.-+.
T Consensus 248 li~~~l~~dp~~Rpt~~~il~~~~~ 272 (296)
T cd06655 248 FLNRCLEMDVEKRGSAKELLQHPFL 272 (296)
T ss_pred HHHHHhhcChhhCCCHHHHhhChHh
Confidence 9999999999999999998765443
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes | Back alignment and domain information |
|---|
Probab=99.81 E-value=2.9e-19 Score=179.55 Aligned_cols=193 Identities=23% Similarity=0.310 Sum_probs=135.3
Q ss_pred eeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc----------------------------CC
Q 042825 424 NRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK----------------------------GT 474 (631)
Q Consensus 424 ~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~----------------------------gs 474 (631)
+.||+|+||.||+|+.. +++.||+|.+... ........|.+|++++.+ ++
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~-~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 79 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRET-LPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGD 79 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCcc-CCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCCc
Confidence 36899999999999975 6899999987643 234455778999988776 45
Q ss_pred hhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCCccccccc
Q 042825 475 LGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENGKHSILTK 530 (631)
Q Consensus 475 L~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~~~~~~~~ 530 (631)
|.+++. .....+++.....++.+++.+ +.+||+|||+++.............
T Consensus 80 L~~~~~----~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~ 155 (252)
T cd05084 80 FLTFLR----TEGPRLKVKELIQMVENAAAGMEYLESKHCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYASTGGM 155 (252)
T ss_pred HHHHHH----hCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEEcCCCcEEECccccCcccccccccccCCC
Confidence 555543 223457888888888777764 3478999999986532111111111
Q ss_pred cccCcccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChHHHHHHHHHhHhh--hcCChhHHHHHHhhcC
Q 042825 531 VAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT-GRKVVDATHSDPEYIIHLATWFQKM--HKNHDTFQMAIDKTIQ 607 (631)
Q Consensus 531 ~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~Ellt-G~~P~~~~~~~~~~~~~l~~~~~~~--~~~~~~l~~~id~~L~ 607 (631)
..++..|+|||.+.+..++.++|||||||++|||++ |..||....... ....+....... ...+..+.+++.+|+.
T Consensus 156 ~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~li~~~l~ 234 (252)
T cd05084 156 KQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQ-TREAIEQGVRLPCPELCPDAVYRLMERCWE 234 (252)
T ss_pred CCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHHH-HHHHHHcCCCCCCcccCCHHHHHHHHHHcC
Confidence 233567999999988889999999999999999998 888887543211 111111111111 1124678999999999
Q ss_pred CChhhHHhHHHHHHH
Q 042825 608 LDEENLANVSTVAEL 622 (631)
Q Consensus 608 ~d~~~r~~~~~vl~l 622 (631)
.+|++|+++.++++.
T Consensus 235 ~~p~~Rps~~~~~~~ 249 (252)
T cd05084 235 YDPGQRPSFSTVHQE 249 (252)
T ss_pred CChhhCcCHHHHHHH
Confidence 999999999998865
|
Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular |
| >cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6 | Back alignment and domain information |
|---|
Probab=99.81 E-value=3.1e-19 Score=185.83 Aligned_cols=195 Identities=23% Similarity=0.335 Sum_probs=130.0
Q ss_pred ceeecCCCceEEEEEEecC---CcEEEEEEEecCCCCHHHHHHHHHHHHHHhc---------------------------
Q 042825 423 ENRLGRGGVGTVYKGELKD---GTEVGVKRMELGSVTEQGIAQFESEITVLTK--------------------------- 472 (631)
Q Consensus 423 ~~~iG~G~fg~Vyk~~~~~---g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~--------------------------- 472 (631)
...||+|+||+||+|+..+ +..||+|++..... ...+.+|++++.+
T Consensus 6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~~----~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~ 81 (317)
T cd07867 6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTGI----SMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDY 81 (317)
T ss_pred ceEeccCCCeeEEEEEecCCCccceEEEEEecCCCC----cHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEee
Confidence 3689999999999999653 57899999875432 2456788888775
Q ss_pred --CChhHHhHhhhh----cCCCCCCHHHHHHHHHHhhcC----------------------------CCcEEEeeccccc
Q 042825 473 --GTLGRHLFNWEE----EGLEPLEWNTRLNIALDVARG----------------------------DDMRVADFGLVRL 518 (631)
Q Consensus 473 --gsL~~~L~~~~~----~~~~~L~~~~~~~I~~~ia~g----------------------------~~~kl~DFGla~~ 518 (631)
+++.+++..... .....+.+.....++.+++.| +.+||+|||+++.
T Consensus 82 ~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~~ 161 (317)
T cd07867 82 AEHDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARL 161 (317)
T ss_pred eCCcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEccCCCCCCcEEEeeccceec
Confidence 223233221100 112346777777888887765 2478999999987
Q ss_pred cCCCCcc-ccccccccCcccccccccccC-CCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHH-----HHHHH------
Q 042825 519 VPENGKH-SILTKVAGTFGYLAPEYIVTG-RITAKVDVYSFGMILMDLITGRKVVDATHSDPEY-----IIHLA------ 585 (631)
Q Consensus 519 ~~~~~~~-~~~~~~~gt~~Y~aPE~~~~~-~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~-----~~~l~------ 585 (631)
....... .......||..|+|||++.+. .++.++|||||||++|||+||+.||.....+... ...+.
T Consensus 162 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (317)
T cd07867 162 FNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPFHHDQLDRIFSVM 241 (317)
T ss_pred cCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcccccccccccccccHHHHHHHHHhc
Confidence 6422211 123346789999999998764 5899999999999999999999999743221000 00000
Q ss_pred ------HHhH------------------------------hhhcCChhHHHHHHhhcCCChhhHHhHHHHHH
Q 042825 586 ------TWFQ------------------------------KMHKNHDTFQMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 586 ------~~~~------------------------------~~~~~~~~l~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
.|.. ........+.+++.++|..||.+|+++.++++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~R~t~~e~l~ 313 (317)
T cd07867 242 GFPADKDWEDIRKMPEYPTLQKDFRRTTYANSSLIKYMEKHKVKPDSKVFLLLQKLLTMDPTKRITSEQALQ 313 (317)
T ss_pred CCCChhhhhhhhhcccchhhhhhhcccccCCchhhhhhhcccCCCChHHHHHHHHHhccCcccccCHHHHhc
Confidence 0100 00011235778999999999999999998874
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as |
| >cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.81 E-value=5.1e-19 Score=184.20 Aligned_cols=202 Identities=20% Similarity=0.251 Sum_probs=143.3
Q ss_pred CCcccceeecCCCceEEEEEEecC-CcEEEEEEEecCCCCH-HHHHHHHHHHHHHhc-----------------------
Q 042825 418 NNFSEENRLGRGGVGTVYKGELKD-GTEVGVKRMELGSVTE-QGIAQFESEITVLTK----------------------- 472 (631)
Q Consensus 418 ~~f~~~~~iG~G~fg~Vyk~~~~~-g~~vAvK~l~~~~~~~-~~~~~~~~Ei~~l~~----------------------- 472 (631)
++|+..+.||+|+||.||+|+..+ ++.||+|.+....... ...+.+..|++++.+
T Consensus 1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 80 (316)
T cd05574 1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVM 80 (316)
T ss_pred CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEE
Confidence 468889999999999999999764 8999999997654432 355678888888765
Q ss_pred -----CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCC
Q 042825 473 -----GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENG 523 (631)
Q Consensus 473 -----gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~ 523 (631)
++|.+++.. .....+++.....++.+++++ +.++|+|||++.......
T Consensus 81 e~~~~~~L~~~~~~---~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~ 157 (316)
T cd05574 81 DYCPGGELFRLLQR---QPGKCLSEEVARFYAAEVLLALEYLHLLGIVYRDLKPENILLHESGHIMLSDFDLSKQSDVEP 157 (316)
T ss_pred EecCCCCHHHHHHh---CCCCccCHHHHHHHHHHHHHHHHHHHHCCeeccCCChHHeEEcCCCCEEEeecchhhcccccc
Confidence 455555532 122457777777777777765 467899999987543111
Q ss_pred cc---------------------------ccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCC
Q 042825 524 KH---------------------------SILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHS 576 (631)
Q Consensus 524 ~~---------------------------~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~ 576 (631)
.. .......||..|+|||+..+..++.++|||||||++|||++|+.||.....
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~ 237 (316)
T cd05574 158 PPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSNR 237 (316)
T ss_pred cccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCCch
Confidence 00 011234689999999999888899999999999999999999999976543
Q ss_pred ChHHHHHHHHHhHh--hhcCChhHHHHHHhhcCCChhhHHh----HHHHHHH
Q 042825 577 DPEYIIHLATWFQK--MHKNHDTFQMAIDKTIQLDEENLAN----VSTVAEL 622 (631)
Q Consensus 577 ~~~~~~~l~~~~~~--~~~~~~~l~~~id~~L~~d~~~r~~----~~~vl~l 622 (631)
..........-... ....+.++.+++.+|+..+|+.|++ +.++++.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~~ 289 (316)
T cd05574 238 DETFSNILKKEVTFPGSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQH 289 (316)
T ss_pred HHHHHHHhcCCccCCCccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHcC
Confidence 22111111100000 0112567999999999999999999 7776653
|
Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin |
| >cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A | Back alignment and domain information |
|---|
Probab=99.81 E-value=2.3e-19 Score=183.57 Aligned_cols=201 Identities=21% Similarity=0.290 Sum_probs=141.9
Q ss_pred CcccceeecCCCceEEEEEEec------CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc--------------------
Q 042825 419 NFSEENRLGRGGVGTVYKGELK------DGTEVGVKRMELGSVTEQGIAQFESEITVLTK-------------------- 472 (631)
Q Consensus 419 ~f~~~~~iG~G~fg~Vyk~~~~------~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~-------------------- 472 (631)
+|...++||+|+||.||++... ++..+|+|.+... .......|.+|++++.+
T Consensus 6 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 83 (280)
T cd05092 6 DIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEA--SESARQDFQREAELLTVLQHQHIVRFYGVCTEGRPLL 83 (280)
T ss_pred hceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcC--CHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCceE
Confidence 5667789999999999999742 3568999987643 34456789999988876
Q ss_pred --------CChhHHhHhhhh----------cCCCCCCHHHHHHHHHHhhcC------------------------CCcEE
Q 042825 473 --------GTLGRHLFNWEE----------EGLEPLEWNTRLNIALDVARG------------------------DDMRV 510 (631)
Q Consensus 473 --------gsL~~~L~~~~~----------~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl 510 (631)
|+|.+++..... .....+++...+.++.+++.+ ..+||
T Consensus 84 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~nil~~~~~~~kL 163 (280)
T cd05092 84 MVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLHFVHRDLATRNCLVGQGLVVKI 163 (280)
T ss_pred EEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCCeecccccHhhEEEcCCCCEEE
Confidence 566666643210 011347888888888777654 45789
Q ss_pred EeeccccccCCCCccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChHHHHHHHHHhH
Q 042825 511 ADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT-GRKVVDATHSDPEYIIHLATWFQ 589 (631)
Q Consensus 511 ~DFGla~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~Ellt-G~~P~~~~~~~~~~~~~l~~~~~ 589 (631)
+|||+++...............+++.|+|||++.+..++.++|||||||++|||++ |+.||......+ ....+.....
T Consensus 164 ~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~-~~~~~~~~~~ 242 (280)
T cd05092 164 GDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTE-AIECITQGRE 242 (280)
T ss_pred CCCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHHH-HHHHHHcCcc
Confidence 99999986642221112223446788999999988899999999999999999998 999987543221 1111222111
Q ss_pred h--hhcCChhHHHHHHhhcCCChhhHHhHHHHHHH
Q 042825 590 K--MHKNHDTFQMAIDKTIQLDEENLANVSTVAEL 622 (631)
Q Consensus 590 ~--~~~~~~~l~~~id~~L~~d~~~r~~~~~vl~l 622 (631)
. ....+..+.+++.+|+..||.+|+++.++++.
T Consensus 243 ~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~~ 277 (280)
T cd05092 243 LERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHSR 277 (280)
T ss_pred CCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHH
Confidence 1 11234678999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory |
| >cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3 | Back alignment and domain information |
|---|
Probab=99.81 E-value=3e-19 Score=181.64 Aligned_cols=202 Identities=20% Similarity=0.244 Sum_probs=140.6
Q ss_pred cccceeecCCCceEEEEEEec----CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc-----------------------
Q 042825 420 FSEENRLGRGGVGTVYKGELK----DGTEVGVKRMELGSVTEQGIAQFESEITVLTK----------------------- 472 (631)
Q Consensus 420 f~~~~~iG~G~fg~Vyk~~~~----~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~----------------------- 472 (631)
|...++||+|+||.||+|.+. .++.||||++..........+++.+|++++.+
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 80 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLP 80 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCccc
Confidence 456789999999999999854 36889999997655555567788899988766
Q ss_pred -----------CChhHHhHhh-hhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccc
Q 042825 473 -----------GTLGRHLFNW-EEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLV 516 (631)
Q Consensus 473 -----------gsL~~~L~~~-~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla 516 (631)
|++.+++... ..+....+++.....++.+++.| ..+|++|||++
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~nili~~~~~~kl~dfg~~ 160 (273)
T cd05074 81 IPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKNFIHRDLAARNCMLNENMTVCVADFGLS 160 (273)
T ss_pred ceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccchhhEEEcCCCCEEECccccc
Confidence 2222222110 01112246777778888888765 45789999999
Q ss_pred cccCCCCccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChHHHHHHHHHhH--hhhc
Q 042825 517 RLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT-GRKVVDATHSDPEYIIHLATWFQ--KMHK 593 (631)
Q Consensus 517 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~Ellt-G~~P~~~~~~~~~~~~~l~~~~~--~~~~ 593 (631)
+...............++..|++||.+....++.++|||||||++|||++ |+.||....... ....+..+.. ....
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~ 239 (273)
T cd05074 161 KKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENSE-IYNYLIKGNRLKQPPD 239 (273)
T ss_pred ccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCHHH-HHHHHHcCCcCCCCCC
Confidence 87642221112233456678999999988889999999999999999999 889987543211 1111111111 1112
Q ss_pred CChhHHHHHHhhcCCChhhHHhHHHHHHH
Q 042825 594 NHDTFQMAIDKTIQLDEENLANVSTVAEL 622 (631)
Q Consensus 594 ~~~~l~~~id~~L~~d~~~r~~~~~vl~l 622 (631)
....+.+++.+|+..+|.+|+++.++++.
T Consensus 240 ~~~~~~~l~~~~l~~~p~~Rps~~~~~~~ 268 (273)
T cd05074 240 CLEDVYELMCQCWSPEPKCRPSFQHLRDQ 268 (273)
T ss_pred CCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 34688999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac |
| >cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1 | Back alignment and domain information |
|---|
Probab=99.81 E-value=2.2e-19 Score=183.22 Aligned_cols=193 Identities=24% Similarity=0.361 Sum_probs=138.8
Q ss_pred CcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc-------------------------
Q 042825 419 NFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK------------------------- 472 (631)
Q Consensus 419 ~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~------------------------- 472 (631)
.|+..+.||+|+||.||+|... +++.||+|.+..... ....+.+.+|++++.+
T Consensus 5 ~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 83 (277)
T cd06642 5 LFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEA-EDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIMEY 83 (277)
T ss_pred HHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccc-hHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEEc
Confidence 4666788999999999999865 578999998875432 3355678899988876
Q ss_pred ---CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCCcc
Q 042825 473 ---GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENGKH 525 (631)
Q Consensus 473 ---gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~~~ 525 (631)
+++.+++. ...+.+.....++.+++++ +.++++|||+++.+... .
T Consensus 84 ~~~~~L~~~~~------~~~~~~~~~~~~~~~i~~~l~~lH~~~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~--~ 155 (277)
T cd06642 84 LGGGSALDLLK------PGPLEETYIATILREILKGLDYLHSERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDT--Q 155 (277)
T ss_pred cCCCcHHHHhh------cCCCCHHHHHHHHHHHHHHHHHHhcCCeeccCCChheEEEeCCCCEEEccccccccccCc--c
Confidence 23333331 1356777777788777764 45789999999876422 1
Q ss_pred ccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHhHhh--hcCChhHHHHHH
Q 042825 526 SILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQKM--HKNHDTFQMAID 603 (631)
Q Consensus 526 ~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~~~~--~~~~~~l~~~id 603 (631)
.......|+..|+|||++.+..++.++|||||||++|||+||+.|+......... ..+....... .....++.+++.
T Consensus 156 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~li~ 234 (277)
T cd06642 156 IKRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVL-FLIPKNSPPTLEGQYSKPFKEFVE 234 (277)
T ss_pred hhhhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhhHH-hhhhcCCCCCCCcccCHHHHHHHH
Confidence 1223456889999999998888999999999999999999999998754322111 1111100000 112357899999
Q ss_pred hhcCCChhhHHhHHHHHH
Q 042825 604 KTIQLDEENLANVSTVAE 621 (631)
Q Consensus 604 ~~L~~d~~~r~~~~~vl~ 621 (631)
+|+..+|.+|+++.++++
T Consensus 235 ~~l~~~p~~Rp~~~~il~ 252 (277)
T cd06642 235 ACLNKDPRFRPTAKELLK 252 (277)
T ss_pred HHccCCcccCcCHHHHHH
Confidence 999999999999999886
|
Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 |
| >cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase | Back alignment and domain information |
|---|
Probab=99.81 E-value=2.9e-19 Score=182.89 Aligned_cols=193 Identities=19% Similarity=0.295 Sum_probs=138.2
Q ss_pred cccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc--------------------------
Q 042825 420 FSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK-------------------------- 472 (631)
Q Consensus 420 f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~-------------------------- 472 (631)
|+..+.||+|+||.||+|... ++..+|+|.+... .....+.+.+|++++.+
T Consensus 7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~~ 84 (282)
T cd06643 7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTK--SEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFC 84 (282)
T ss_pred HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCC--CHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEec
Confidence 566788999999999999976 4788999988653 23456778889988765
Q ss_pred --CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCCccc
Q 042825 473 --GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENGKHS 526 (631)
Q Consensus 473 --gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~~~~ 526 (631)
+++..++. .....+++..+..++.+++.+ +.+||+|||+++..... ..
T Consensus 85 ~~~~l~~~~~----~~~~~l~~~~~~~~~~qi~~~L~~LH~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~--~~ 158 (282)
T cd06643 85 AGGAVDAVML----ELERPLTEPQIRVVCKQTLEALNYLHENKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRT--IQ 158 (282)
T ss_pred CCCcHHHHHH----hcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEccCCCEEEcccccccccccc--cc
Confidence 34444332 123468888888888888765 45789999999765321 11
Q ss_pred cccccccCcccccccccc-----cCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHhH----hhhcCChh
Q 042825 527 ILTKVAGTFGYLAPEYIV-----TGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQ----KMHKNHDT 597 (631)
Q Consensus 527 ~~~~~~gt~~Y~aPE~~~-----~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~~----~~~~~~~~ 597 (631)
......|+..|+|||++. +..++.++|||||||++|||++|+.||....... ....+..... .....+.+
T Consensus 159 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 237 (282)
T cd06643 159 RRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMR-VLLKIAKSEPPTLAQPSRWSSE 237 (282)
T ss_pred ccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHH-HHHHHhhcCCCCCCCccccCHH
Confidence 233457899999999974 3457889999999999999999999997543221 1111211111 11112457
Q ss_pred HHHHHHhhcCCChhhHHhHHHHHH
Q 042825 598 FQMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 598 l~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
+.+++.+++..+|.+|+++.++++
T Consensus 238 ~~~li~~~l~~~p~~Rp~~~~il~ 261 (282)
T cd06643 238 FKDFLKKCLEKNVDARWTTTQLLQ 261 (282)
T ss_pred HHHHHHHHccCChhhCcCHHHHhc
Confidence 999999999999999999988764
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. |
| >cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4 | Back alignment and domain information |
|---|
Probab=99.81 E-value=5.9e-19 Score=178.30 Aligned_cols=198 Identities=21% Similarity=0.343 Sum_probs=141.8
Q ss_pred CcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc-------------------------
Q 042825 419 NFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK------------------------- 472 (631)
Q Consensus 419 ~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~------------------------- 472 (631)
+|+..+.||+|+||.||+|... +++.||+|.+..........+.+..|++++.+
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEY 80 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEec
Confidence 4777899999999999999865 68999999998765444567789999988876
Q ss_pred ---CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCCcc
Q 042825 473 ---GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENGKH 525 (631)
Q Consensus 473 ---gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~~~ 525 (631)
++|.+++.. ...+.+.....|+.++++| +.+||+|||++.........
T Consensus 81 ~~~~~L~~~~~~-----~~~~~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~~ 155 (264)
T cd06626 81 CSGGTLEELLEH-----GRILDEHVIRVYTLQLLEGLAYLHSHGIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTT 155 (264)
T ss_pred CCCCcHHHHHhh-----cCCCChHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEcccccccccCCCCCc
Confidence 344444421 2346777777787777765 45789999999876432221
Q ss_pred cc--ccccccCcccccccccccCC---CCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHhHhhh----cCCh
Q 042825 526 SI--LTKVAGTFGYLAPEYIVTGR---ITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQKMH----KNHD 596 (631)
Q Consensus 526 ~~--~~~~~gt~~Y~aPE~~~~~~---~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~~~~~----~~~~ 596 (631)
.. .....++..|+|||++.... ++.++||||||+++|||++|+.||............+........ ..+.
T Consensus 156 ~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (264)
T cd06626 156 MGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEFQIMFHVGAGHKPPIPDSLQLSP 235 (264)
T ss_pred ccccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchHHHHHHHhcCCCCCCCcccccCH
Confidence 11 12356889999999988766 889999999999999999999999754322111111111111011 1145
Q ss_pred hHHHHHHhhcCCChhhHHhHHHHHH
Q 042825 597 TFQMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 597 ~l~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
.+.+++.+++..+|.+|+++.+++.
T Consensus 236 ~~~~li~~~l~~~p~~R~~~~~i~~ 260 (264)
T cd06626 236 EGKDFLDRCLESDPKKRPTASELLQ 260 (264)
T ss_pred HHHHHHHHHccCCcccCCCHHHHhc
Confidence 7889999999999999999988764
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4 |
| >cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.81 E-value=3.9e-19 Score=182.15 Aligned_cols=198 Identities=20% Similarity=0.263 Sum_probs=140.4
Q ss_pred CCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhcC-----------------------
Q 042825 418 NNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTKG----------------------- 473 (631)
Q Consensus 418 ~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~g----------------------- 473 (631)
++|+..+.||+|+||.||+|+.+ +++.||||+++.........+.+.+|++++++-
T Consensus 1 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e 80 (288)
T cd07833 1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFE 80 (288)
T ss_pred CceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEe
Confidence 36888999999999999999976 588999999876443344457788999988761
Q ss_pred ----ChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCCcc
Q 042825 474 ----TLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENGKH 525 (631)
Q Consensus 474 ----sL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~~~ 525 (631)
++...+ . .....+++.....++.+++.| +.+||+|||+++.......
T Consensus 81 ~~~~~~l~~~---~-~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~~- 155 (288)
T cd07833 81 YVERTLLELL---E-ASPGGLPPDAVRSYIWQLLQAIAYCHSHNIIHRDIKPENILVSESGVLKLCDFGFARALRARPA- 155 (288)
T ss_pred cCCCCHHHHH---H-hcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEEeeecccccCCCcc-
Confidence 111111 1 112346777777777777765 5678999999987643221
Q ss_pred ccccccccCcccccccccccC-CCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHh----------------
Q 042825 526 SILTKVAGTFGYLAPEYIVTG-RITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWF---------------- 588 (631)
Q Consensus 526 ~~~~~~~gt~~Y~aPE~~~~~-~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~---------------- 588 (631)
.......++..|+|||++.+. .++.++||||||+++|||++|+.||......+ ....+....
T Consensus 156 ~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (288)
T cd07833 156 SPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDID-QLYLIQKCLGPLPPSHQELFSSNPR 234 (288)
T ss_pred ccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHhCCCCHHHhhhcccCcc
Confidence 123446788999999999888 78999999999999999999999997543211 111111100
Q ss_pred ---------------H-hhhc-CChhHHHHHHhhcCCChhhHHhHHHHHH
Q 042825 589 ---------------Q-KMHK-NHDTFQMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 589 ---------------~-~~~~-~~~~l~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
. .... .+.++.+++.+++..+|++|+++.++++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 284 (288)
T cd07833 235 FAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQ 284 (288)
T ss_pred ccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhc
Confidence 0 0001 1467899999999999999999988765
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning |
| >cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Probab=99.81 E-value=2.8e-19 Score=185.14 Aligned_cols=208 Identities=22% Similarity=0.291 Sum_probs=145.6
Q ss_pred cCCcccceeecCCCceEEEEEEec--------CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc----------------
Q 042825 417 TNNFSEENRLGRGGVGTVYKGELK--------DGTEVGVKRMELGSVTEQGIAQFESEITVLTK---------------- 472 (631)
Q Consensus 417 t~~f~~~~~iG~G~fg~Vyk~~~~--------~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~---------------- 472 (631)
.++|...+.||+|+||.||+|+.. ++..||+|.+.... .....+++.+|+.++..
T Consensus 14 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~ 92 (304)
T cd05101 14 RDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDA-TEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ 92 (304)
T ss_pred HHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeeccccc-chHHHHHHHHHHHHHHhhccCCCchheeEEEec
Confidence 456778899999999999999742 24579999886432 33456778888887753
Q ss_pred -------------CChhHHhHhhhhc-----------CCCCCCHHHHHHHHHHhhcC-----------------------
Q 042825 473 -------------GTLGRHLFNWEEE-----------GLEPLEWNTRLNIALDVARG----------------------- 505 (631)
Q Consensus 473 -------------gsL~~~L~~~~~~-----------~~~~L~~~~~~~I~~~ia~g----------------------- 505 (631)
|+|.+++...... ....++|.+...++.++++|
T Consensus 93 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Nili~~ 172 (304)
T cd05101 93 DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQKCIHRDLAARNVLVTE 172 (304)
T ss_pred CCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCCeeecccccceEEEcC
Confidence 5777776542110 12357888888888888876
Q ss_pred -CCcEEEeeccccccCCCCccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChHHHHH
Q 042825 506 -DDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT-GRKVVDATHSDPEYIIH 583 (631)
Q Consensus 506 -~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~Ellt-G~~P~~~~~~~~~~~~~ 583 (631)
+.+||+|||+++...............++..|+|||++.+..++.++|||||||++|||++ |..||......+ ....
T Consensus 173 ~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~-~~~~ 251 (304)
T cd05101 173 NNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE-LFKL 251 (304)
T ss_pred CCcEEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHH-HHHH
Confidence 4578999999987643222222233456788999999988889999999999999999998 888887543221 1111
Q ss_pred HHHHhH--hhhcCChhHHHHHHhhcCCChhhHHhHHHHHHHHHhh
Q 042825 584 LATWFQ--KMHKNHDTFQMAIDKTIQLDEENLANVSTVAELGDHC 626 (631)
Q Consensus 584 l~~~~~--~~~~~~~~l~~~id~~L~~d~~~r~~~~~vl~lal~C 626 (631)
+..... ........+.+++.+|+..+|.+|+++.++++.....
T Consensus 252 ~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~~~ 296 (304)
T cd05101 252 LKEGHRMDKPANCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDRI 296 (304)
T ss_pred HHcCCcCCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHH
Confidence 111110 0111246789999999999999999999988765443
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase | Back alignment and domain information |
|---|
Probab=99.81 E-value=5.2e-19 Score=181.85 Aligned_cols=199 Identities=19% Similarity=0.290 Sum_probs=136.8
Q ss_pred hcCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc----------------------
Q 042825 416 ATNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK---------------------- 472 (631)
Q Consensus 416 ~t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~---------------------- 472 (631)
++++|...+.||+|+||.||+|+.. +|+.||+|++..... ......+.+|++++.+
T Consensus 3 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv 81 (291)
T cd07870 3 AATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTE-EGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFV 81 (291)
T ss_pred ccceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCc-CCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEE
Confidence 5678999999999999999999865 588999999865432 1223456778877765
Q ss_pred -----CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCC
Q 042825 473 -----GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENG 523 (631)
Q Consensus 473 -----gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~ 523 (631)
+++..++. .....+.+.....++.+++.| +.++|+|||+++......
T Consensus 82 ~e~~~~~l~~~~~----~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~ 157 (291)
T cd07870 82 FEYMHTDLAQYMI----QHPGGLHPYNVRLFMFQLLRGLAYIHGQHILHRDLKPQNLLISYLGELKLADFGLARAKSIPS 157 (291)
T ss_pred EecccCCHHHHHH----hCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEEcCCCcEEEeccccccccCCCC
Confidence 22222221 122346677777777777665 457899999998653211
Q ss_pred ccccccccccCcccccccccccC-CCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHH----------------
Q 042825 524 KHSILTKVAGTFGYLAPEYIVTG-RITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLAT---------------- 586 (631)
Q Consensus 524 ~~~~~~~~~gt~~Y~aPE~~~~~-~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~---------------- 586 (631)
.......++..|+|||++.+. .++.++|||||||++|||++|+.||+......+.......
T Consensus 158 --~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (291)
T cd07870 158 --QTYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTWPGVSKL 235 (291)
T ss_pred --CCCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHcCCCChhhhhhhhhc
Confidence 122334578999999998754 5889999999999999999999999754332111111100
Q ss_pred ------Hh-----------HhhhcCChhHHHHHHhhcCCChhhHHhHHHHHH
Q 042825 587 ------WF-----------QKMHKNHDTFQMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 587 ------~~-----------~~~~~~~~~l~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
|. ........++.+++.+++..||.+|+++.+++.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~ 287 (291)
T cd07870 236 PNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALL 287 (291)
T ss_pred ccccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhc
Confidence 00 000112357889999999999999999998764
|
Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess |
| >cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1 | Back alignment and domain information |
|---|
Probab=99.81 E-value=3.7e-19 Score=183.65 Aligned_cols=200 Identities=23% Similarity=0.251 Sum_probs=137.8
Q ss_pred CCcccceeecCCCceEEEEEEecC-Cc--EEEEEEEecCCCCHHHHHHHHHHHHHHhc----------------------
Q 042825 418 NNFSEENRLGRGGVGTVYKGELKD-GT--EVGVKRMELGSVTEQGIAQFESEITVLTK---------------------- 472 (631)
Q Consensus 418 ~~f~~~~~iG~G~fg~Vyk~~~~~-g~--~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~---------------------- 472 (631)
++|+..++||+|+||.||+|+.++ +. .+++|.++... .....+.|.+|++++.+
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~-~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~l 80 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFA-SENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYI 80 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccC-CHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceE
Confidence 578888999999999999998764 43 47888876422 33445678889887754
Q ss_pred -------CChhHHhHhhhh-----------cCCCCCCHHHHHHHHHHhhcC------------------------CCcEE
Q 042825 473 -------GTLGRHLFNWEE-----------EGLEPLEWNTRLNIALDVARG------------------------DDMRV 510 (631)
Q Consensus 473 -------gsL~~~L~~~~~-----------~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl 510 (631)
|+|.+++..... .....+.+.....|+.+++.+ ..+||
T Consensus 81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kl 160 (297)
T cd05089 81 AIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQFIHRDLAARNVLVGENLASKI 160 (297)
T ss_pred EEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCcCCcceEEECCCCeEEE
Confidence 456666643110 011357888888888887765 34689
Q ss_pred EeeccccccCCCCccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChHHHHHHHH-Hh
Q 042825 511 ADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT-GRKVVDATHSDPEYIIHLAT-WF 588 (631)
Q Consensus 511 ~DFGla~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~Ellt-G~~P~~~~~~~~~~~~~l~~-~~ 588 (631)
+|||+++.... .........+..|+|||++....++.++|||||||++|||+| |+.||........ ...+.. +.
T Consensus 161 ~dfg~~~~~~~---~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~~~-~~~~~~~~~ 236 (297)
T cd05089 161 ADFGLSRGEEV---YVKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAEL-YEKLPQGYR 236 (297)
T ss_pred CCcCCCccccc---eeccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHH-HHHHhcCCC
Confidence 99999874321 111112233567999999988889999999999999999998 9999976533211 111111 00
Q ss_pred H-hhhcCChhHHHHHHhhcCCChhhHHhHHHHHHH
Q 042825 589 Q-KMHKNHDTFQMAIDKTIQLDEENLANVSTVAEL 622 (631)
Q Consensus 589 ~-~~~~~~~~l~~~id~~L~~d~~~r~~~~~vl~l 622 (631)
. .....+..+.+++.+|+..+|.+|+++.++++.
T Consensus 237 ~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~ 271 (297)
T cd05089 237 MEKPRNCDDEVYELMRQCWRDRPYERPPFAQISVQ 271 (297)
T ss_pred CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 0 011134678999999999999999999998654
|
Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations. |
| >PHA02882 putative serine/threonine kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=6.4e-19 Score=181.67 Aligned_cols=133 Identities=14% Similarity=0.146 Sum_probs=95.5
Q ss_pred CCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCCcc-----ccccccccCcccccc
Q 042825 490 LEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENGKH-----SILTKVAGTFGYLAP 540 (631)
Q Consensus 490 L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~~~-----~~~~~~~gt~~Y~aP 540 (631)
..+.....|+.+++.| +.++|+|||+|+........ .......||+.|+||
T Consensus 123 ~~~~~~~~i~~qi~~~l~~lH~~~iiHrDiKp~Nill~~~~~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ap 202 (294)
T PHA02882 123 KNKKLIKNIMKDMLTTLEYIHEHGISHGDIKPENIMVDGNNRGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGL 202 (294)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCcEEEEEcCCceeeccCCcccccccccccccCCCccccCH
Confidence 4555666777777766 45789999999876422211 112235799999999
Q ss_pred cccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHH-HHHHhHhh-------hcCChhHHHHHHhhcCCChhh
Q 042825 541 EYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIH-LATWFQKM-------HKNHDTFQMAIDKTIQLDEEN 612 (631)
Q Consensus 541 E~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~-l~~~~~~~-------~~~~~~l~~~id~~L~~d~~~ 612 (631)
|+..+..++.++|||||||++|||++|+.||............ ..++.... ...+..+.++++.++..++++
T Consensus 203 e~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (294)
T PHA02882 203 DAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGNLIHAAKCDFIKRLHEGKIKIKNANKFIYDFIECVTKLSYEE 282 (294)
T ss_pred HHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccchHHHHHhHHHHHHHhhhhhhccCCCCHHHHHHHHHHHhCCCCC
Confidence 9999889999999999999999999999999866333211111 11222221 122467899999999999999
Q ss_pred HHhHHHHHHH
Q 042825 613 LANVSTVAEL 622 (631)
Q Consensus 613 r~~~~~vl~l 622 (631)
||++.++.++
T Consensus 283 rp~~~~l~~~ 292 (294)
T PHA02882 283 KPDYDALIKI 292 (294)
T ss_pred CCCHHHHHHh
Confidence 9999988764
|
|
| >cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase | Back alignment and domain information |
|---|
Probab=99.81 E-value=3e-19 Score=179.79 Aligned_cols=196 Identities=20% Similarity=0.344 Sum_probs=137.7
Q ss_pred CCcccceeecCCCceEEEEEEecCCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc-------------------------
Q 042825 418 NNFSEENRLGRGGVGTVYKGELKDGTEVGVKRMELGSVTEQGIAQFESEITVLTK------------------------- 472 (631)
Q Consensus 418 ~~f~~~~~iG~G~fg~Vyk~~~~~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~------------------------- 472 (631)
.+|+..+.||+|+||.||++.+.++..+|+|++...... ..+|.+|++++.+
T Consensus 4 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~~~---~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 80 (256)
T cd05112 4 SELTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGAMS---EEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEF 80 (256)
T ss_pred hHeEEEeeecCcccceEEEEEEeCCCeEEEEECCCCCCC---HHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEEc
Confidence 357778999999999999999877889999998754432 3568889888865
Q ss_pred ---CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCCcc
Q 042825 473 ---GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENGKH 525 (631)
Q Consensus 473 ---gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~~~ 525 (631)
++|.+++.. ....+.+.....++.+++.+ ..++|+|||+++..... ..
T Consensus 81 ~~~~~L~~~~~~----~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~-~~ 155 (256)
T cd05112 81 MEHGCLSDYLRA----QRGKFSQETLLGMCLDVCEGMAYLESSNVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDD-QY 155 (256)
T ss_pred CCCCcHHHHHHh----CccCCCHHHHHHHHHHHHHHHHHHHHCCccccccccceEEEcCCCeEEECCCcceeecccC-cc
Confidence 455544431 22346777776666665543 35789999999865322 11
Q ss_pred ccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChHHHHHHHHHhHh--hhcCChhHHHHH
Q 042825 526 SILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT-GRKVVDATHSDPEYIIHLATWFQK--MHKNHDTFQMAI 602 (631)
Q Consensus 526 ~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~Ellt-G~~P~~~~~~~~~~~~~l~~~~~~--~~~~~~~l~~~i 602 (631)
.......++.+|+|||++.+..++.++|||||||++|||++ |+.||....... ....+..-.+. ....++.+.+++
T Consensus 156 ~~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~ 234 (256)
T cd05112 156 TSSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNSE-VVETINAGFRLYKPRLASQSVYELM 234 (256)
T ss_pred cccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHHH-HHHHHhCCCCCCCCCCCCHHHHHHH
Confidence 11223345678999999988889999999999999999998 999997543211 11111110000 111246789999
Q ss_pred HhhcCCChhhHHhHHHHHHH
Q 042825 603 DKTIQLDEENLANVSTVAEL 622 (631)
Q Consensus 603 d~~L~~d~~~r~~~~~vl~l 622 (631)
.+++..+|++|+++.++++.
T Consensus 235 ~~~l~~~p~~Rp~~~~~l~~ 254 (256)
T cd05112 235 QHCWKERPEDRPSFSLLLHQ 254 (256)
T ss_pred HHHcccChhhCCCHHHHHHh
Confidence 99999999999999988763
|
Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ |
| >cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.81 E-value=6.8e-19 Score=185.57 Aligned_cols=200 Identities=21% Similarity=0.293 Sum_probs=136.6
Q ss_pred cCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhcCC---hhHHh-------------
Q 042825 417 TNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTKGT---LGRHL------------- 479 (631)
Q Consensus 417 t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~gs---L~~~L------------- 479 (631)
.++|...+.||+|+||.||+|+.. +|+.||||++............+.+|++++.+-. +...+
T Consensus 14 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 93 (342)
T cd07879 14 PERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQ 93 (342)
T ss_pred ccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCc
Confidence 478999999999999999999965 6899999998754333333456788888886511 00000
Q ss_pred -----Hhhh-----hcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCCcc
Q 042825 480 -----FNWE-----EEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENGKH 525 (631)
Q Consensus 480 -----~~~~-----~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~~~ 525 (631)
.++. ......+.+.....++.++++| +.+||+|||+++....
T Consensus 94 ~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dlkp~NIll~~~~~~kL~dfg~~~~~~~---- 169 (342)
T cd07879 94 DFYLVMPYMQTDLQKIMGHPLSEDKVQYLVYQMLCGLKYIHSAGIIHRDLKPGNLAVNEDCELKILDFGLARHADA---- 169 (342)
T ss_pred eEEEEecccccCHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCCCCcCCCC----
Confidence 0000 0011246777777777777665 4578999999986531
Q ss_pred ccccccccCccccccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHH-------------------H
Q 042825 526 SILTKVAGTFGYLAPEYIVT-GRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHL-------------------A 585 (631)
Q Consensus 526 ~~~~~~~gt~~Y~aPE~~~~-~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l-------------------~ 585 (631)
......++..|+|||++.+ ..++.++|||||||++|||++|+.||.+..........+ .
T Consensus 170 -~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (342)
T cd07879 170 -EMTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGPEFVQKLEDKAAK 248 (342)
T ss_pred -CCCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhcccchH
Confidence 1234567889999999876 468999999999999999999999998643211100000 0
Q ss_pred HHhHh------------hhcCChhHHHHHHhhcCCChhhHHhHHHHHH
Q 042825 586 TWFQK------------MHKNHDTFQMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 586 ~~~~~------------~~~~~~~l~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
.+... ....+.++.+++.+|+..||.+|+++.+++.
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~ 296 (342)
T cd07879 249 SYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALE 296 (342)
T ss_pred HHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 01000 0112356789999999999999999998874
|
Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13 |
| >cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4 | Back alignment and domain information |
|---|
Probab=99.81 E-value=4.6e-19 Score=181.42 Aligned_cols=200 Identities=19% Similarity=0.260 Sum_probs=139.3
Q ss_pred CCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhcCChh--------------------
Q 042825 418 NNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTKGTLG-------------------- 476 (631)
Q Consensus 418 ~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~gsL~-------------------- 476 (631)
++|+..+.||+|+||.||+|+.+ +|+.||+|++..........+.+.+|++++.+-...
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e 80 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFE 80 (286)
T ss_pred CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEe
Confidence 46888899999999999999976 589999999865432223345678898888661100
Q ss_pred ----HHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCCccccc
Q 042825 477 ----RHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENGKHSIL 528 (631)
Q Consensus 477 ----~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~~~~~~ 528 (631)
..+..+. .....++|.....++.+++++ +.++|+|||+++....... ..
T Consensus 81 ~~~~~~l~~~~-~~~~~~~~~~~~~~~~ql~~~l~~LH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~--~~ 157 (286)
T cd07847 81 YCDHTVLNELE-KNPRGVPEHLIKKIIWQTLQAVNFCHKHNCIHRDVKPENILITKQGQIKLCDFGFARILTGPGD--DY 157 (286)
T ss_pred ccCccHHHHHH-hCCCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCChhhEEEcCCCcEEECccccceecCCCcc--cc
Confidence 0011111 122358888888888888865 4578999999987642221 22
Q ss_pred cccccCccccccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHh----H--------------
Q 042825 529 TKVAGTFGYLAPEYIVT-GRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWF----Q-------------- 589 (631)
Q Consensus 529 ~~~~gt~~Y~aPE~~~~-~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~----~-------------- 589 (631)
....++..|+|||++.+ ..++.++|||||||++|||++|+.||.+....+ ....+.... .
T Consensus 158 ~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (286)
T cd07847 158 TDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVD-QLYLIRKTLGDLIPRHQQIFSTNQFFKG 236 (286)
T ss_pred cCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHHhCCCChHHhhhccccccccc
Confidence 34567889999999876 458899999999999999999999997654321 111111100 0
Q ss_pred --------------hhhcCChhHHHHHHhhcCCChhhHHhHHHHHH
Q 042825 590 --------------KMHKNHDTFQMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 590 --------------~~~~~~~~l~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
.....+..+.+++.+|+..+|++|+++.++++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~ 282 (286)
T cd07847 237 LSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLE 282 (286)
T ss_pred ccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhc
Confidence 00112456789999999999999999998765
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio |
| >KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.81 E-value=3e-20 Score=185.96 Aligned_cols=192 Identities=19% Similarity=0.273 Sum_probs=123.1
Q ss_pred CcccceeecCCCceEEEEEEecC-CcEEEEEEEecCCCC-HHHHHHHHHHH-------------------HHHhc-----
Q 042825 419 NFSEENRLGRGGVGTVYKGELKD-GTEVGVKRMELGSVT-EQGIAQFESEI-------------------TVLTK----- 472 (631)
Q Consensus 419 ~f~~~~~iG~G~fg~Vyk~~~~~-g~~vAvK~l~~~~~~-~~~~~~~~~Ei-------------------~~l~~----- 472 (631)
+|.-..+||+|+||.|..+..+. .+.+|||+++++-+- +...+--+.|- +.|.+
T Consensus 350 DFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRLyFVM 429 (683)
T KOG0696|consen 350 DFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRLYFVM 429 (683)
T ss_pred ccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhheeeEE
Confidence 67788999999999999998663 678999998764321 11111111222 22222
Q ss_pred -----CChhHHhHhhhhcCCCCCCHHHHHHHHHHhh----cC----------------CCcEEEeeccccccCCCCcccc
Q 042825 473 -----GTLGRHLFNWEEEGLEPLEWNTRLNIALDVA----RG----------------DDMRVADFGLVRLVPENGKHSI 527 (631)
Q Consensus 473 -----gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia----~g----------------~~~kl~DFGla~~~~~~~~~~~ 527 (631)
|+|--++.++.+- .++..-.-...||++.- +| +++||+|||+++.---+ ...
T Consensus 430 EyvnGGDLMyhiQQ~GkF-KEp~AvFYAaEiaigLFFLh~kgIiYRDLKLDNvmLd~eGHiKi~DFGmcKEni~~--~~T 506 (683)
T KOG0696|consen 430 EYVNGGDLMYHIQQVGKF-KEPVAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIFD--GVT 506 (683)
T ss_pred EEecCchhhhHHHHhccc-CCchhhhhhHHHHHHhhhhhcCCeeeeeccccceEeccCCceEeeecccccccccC--Ccc
Confidence 6666666543221 11111111222332211 11 67899999999853212 234
Q ss_pred ccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHhHhhhcCChhHHHHHHhhcC
Q 042825 528 LTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQKMHKNHDTFQMAIDKTIQ 607 (631)
Q Consensus 528 ~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~id~~L~ 607 (631)
+.+++||+.|+|||++...+|...+|.|||||+||||+.|++||++..+++.....+..-+...-..+.+..++....|.
T Consensus 507 TkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~elF~aI~ehnvsyPKslSkEAv~ickg~lt 586 (683)
T KOG0696|consen 507 TKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQAIMEHNVSYPKSLSKEAVAICKGLLT 586 (683)
T ss_pred eeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHccCcCcccccHHHHHHHHHHhh
Confidence 56789999999999999999999999999999999999999999987655433222322232222334567788888777
Q ss_pred CChhhH
Q 042825 608 LDEENL 613 (631)
Q Consensus 608 ~d~~~r 613 (631)
..|..|
T Consensus 587 K~P~kR 592 (683)
T KOG0696|consen 587 KHPGKR 592 (683)
T ss_pred cCCccc
Confidence 666654
|
|
| >cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.81 E-value=3.4e-19 Score=179.64 Aligned_cols=193 Identities=23% Similarity=0.314 Sum_probs=136.9
Q ss_pred eeecCCCceEEEEEEecC----CcEEEEEEEecCCCCHHHHHHHHHHHHHHhc---------------------------
Q 042825 424 NRLGRGGVGTVYKGELKD----GTEVGVKRMELGSVTEQGIAQFESEITVLTK--------------------------- 472 (631)
Q Consensus 424 ~~iG~G~fg~Vyk~~~~~----g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~--------------------------- 472 (631)
+.||+|+||.||+|+... +..+|+|.+...... ...+++.+|++++++
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~v~e~~~~ 79 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIA-AGKKEFLREASVMAQLDHPCIVRLIGVCKGEPLMLVMELAPL 79 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccch-HHHHHHHHHHHHHHhcCCCCeeeEEEEEcCCceEEEEEeCCC
Confidence 479999999999997542 368999998765433 355678899988875
Q ss_pred CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCCccc-c
Q 042825 473 GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENGKHS-I 527 (631)
Q Consensus 473 gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~~~~-~ 527 (631)
|+|.+++.. ...+++..+..++.+++.+ +.+||+|||+++......... .
T Consensus 80 ~~L~~~l~~-----~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~~~~ 154 (257)
T cd05060 80 GPLLKYLKK-----RREIPVSDLKELAHQVAMGMAYLESKHFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYYRA 154 (257)
T ss_pred CcHHHHHHh-----CCCCCHHHHHHHHHHHHHHHHHHhhcCeeccCcccceEEEcCCCcEEeccccccceeecCCccccc
Confidence 455555532 1257888888888888776 457899999998764322111 1
Q ss_pred ccccccCcccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChHHHHHHHHHhH--hhhcCChhHHHHHHh
Q 042825 528 LTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT-GRKVVDATHSDPEYIIHLATWFQ--KMHKNHDTFQMAIDK 604 (631)
Q Consensus 528 ~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~Ellt-G~~P~~~~~~~~~~~~~l~~~~~--~~~~~~~~l~~~id~ 604 (631)
.....++..|+|||+..+..++.++|||||||++|||++ |+.||....... ....+..... .....+..+.+++.+
T Consensus 155 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~li~~ 233 (257)
T cd05060 155 TTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGAE-VIAMLESGERLPRPEECPQEIYSIMLS 233 (257)
T ss_pred ccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCHHH-HHHHHHcCCcCCCCCCCCHHHHHHHHH
Confidence 112234568999999988889999999999999999998 999997543211 1111111100 111123578999999
Q ss_pred hcCCChhhHHhHHHHHHHH
Q 042825 605 TIQLDEENLANVSTVAELG 623 (631)
Q Consensus 605 ~L~~d~~~r~~~~~vl~la 623 (631)
|+..+|.+||++.++++..
T Consensus 234 cl~~~p~~Rp~~~~l~~~l 252 (257)
T cd05060 234 CWKYRPEDRPTFSELESTF 252 (257)
T ss_pred HhcCChhhCcCHHHHHHHH
Confidence 9999999999999988754
|
Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi |
| >cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2 | Back alignment and domain information |
|---|
Probab=99.81 E-value=4.1e-19 Score=180.15 Aligned_cols=203 Identities=21% Similarity=0.347 Sum_probs=142.9
Q ss_pred cCCcccceeecCCCceEEEEEEecC-C---cEEEEEEEecCCCCHHHHHHHHHHHHHHhc--------------------
Q 042825 417 TNNFSEENRLGRGGVGTVYKGELKD-G---TEVGVKRMELGSVTEQGIAQFESEITVLTK-------------------- 472 (631)
Q Consensus 417 t~~f~~~~~iG~G~fg~Vyk~~~~~-g---~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~-------------------- 472 (631)
.++|+..+.||+|+||.||+|+.+. + ..+|+|++.... .....+++..|++++.+
T Consensus 4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 82 (268)
T cd05063 4 PSHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGY-TEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAM 82 (268)
T ss_pred hHHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccC-CHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcE
Confidence 3467888999999999999999752 3 379999886543 33456778999988865
Q ss_pred --------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccC
Q 042825 473 --------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVP 520 (631)
Q Consensus 473 --------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~ 520 (631)
++|.+++.. ....++|.....++.+++.+ ..+|++|||+++...
T Consensus 83 lv~e~~~~~~L~~~~~~----~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~ 158 (268)
T cd05063 83 IITEYMENGALDKYLRD----HDGEFSSYQLVGMLRGIAAGMKYLSDMNYVHRDLAARNILVNSNLECKVSDFGLSRVLE 158 (268)
T ss_pred EEEEcCCCCCHHHHHHh----cCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEEcCCCcEEECCCccceecc
Confidence 455555532 22457888888888887765 356899999998664
Q ss_pred CCCccc-cccccccCcccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChHHHHHHHHHhH--hhhcCCh
Q 042825 521 ENGKHS-ILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT-GRKVVDATHSDPEYIIHLATWFQ--KMHKNHD 596 (631)
Q Consensus 521 ~~~~~~-~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~Ellt-G~~P~~~~~~~~~~~~~l~~~~~--~~~~~~~ 596 (631)
...... .......+..|+|||++....++.++|||||||++|||++ |+.||....... ....+..-.. .......
T Consensus 159 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~~-~~~~i~~~~~~~~~~~~~~ 237 (268)
T cd05063 159 DDPEGTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSNHE-VMKAINDGFRLPAPMDCPS 237 (268)
T ss_pred cccccceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHHH-HHHHHhcCCCCCCCCCCCH
Confidence 221111 1112234567999999988889999999999999999998 999997543221 1111111000 1112246
Q ss_pred hHHHHHHhhcCCChhhHHhHHHHHHHHHh
Q 042825 597 TFQMAIDKTIQLDEENLANVSTVAELGDH 625 (631)
Q Consensus 597 ~l~~~id~~L~~d~~~r~~~~~vl~lal~ 625 (631)
.+.+++.+|+..+|.+||++.++++....
T Consensus 238 ~~~~li~~c~~~~p~~Rp~~~~i~~~l~~ 266 (268)
T cd05063 238 AVYQLMLQCWQQDRARRPRFVDIVNLLDK 266 (268)
T ss_pred HHHHHHHHHcCCCcccCcCHHHHHHHHHh
Confidence 78999999999999999999999876543
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored |
| >cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5 | Back alignment and domain information |
|---|
Probab=99.81 E-value=6.7e-19 Score=179.98 Aligned_cols=200 Identities=22% Similarity=0.305 Sum_probs=138.3
Q ss_pred CCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhcCChhHH---------------hHh
Q 042825 418 NNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTKGTLGRH---------------LFN 481 (631)
Q Consensus 418 ~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~gsL~~~---------------L~~ 481 (631)
++|+..++||+|+||.||+|+.. +++.||+|++.... .....+++.+|++++.+-+.... +.+
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 79 (279)
T cd06619 1 QDIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDI-TVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTE 79 (279)
T ss_pred CcchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCC-ChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEe
Confidence 36778899999999999999864 68899999987543 33455678999998865211100 001
Q ss_pred hhhcC----CCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCCcccccccccc
Q 042825 482 WEEEG----LEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENGKHSILTKVAG 533 (631)
Q Consensus 482 ~~~~~----~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~~~~~~~~~~g 533 (631)
+...+ ...+++.....++.+++.+ +.++|+|||+++..... ......|
T Consensus 80 ~~~~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~----~~~~~~~ 155 (279)
T cd06619 80 FMDGGSLDVYRKIPEHVLGRIAVAVVKGLTYLWSLKILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNS----IAKTYVG 155 (279)
T ss_pred cCCCCChHHhhcCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCCHHHEEECCCCCEEEeeCCcceecccc----cccCCCC
Confidence 11110 1235666666777777665 46789999999865321 2234679
Q ss_pred CcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHH--HHHHHHh----Hhh---hcCChhHHHHHHh
Q 042825 534 TFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYI--IHLATWF----QKM---HKNHDTFQMAIDK 604 (631)
Q Consensus 534 t~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~--~~l~~~~----~~~---~~~~~~l~~~id~ 604 (631)
|..|+|||++.+..++.++|||||||++|||++|+.||.......... ....... ... ...+.++.+++.+
T Consensus 156 ~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 235 (279)
T cd06619 156 TNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDEDPPVLPVGQFSEKFVHFITQ 235 (279)
T ss_pred ChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHhccCCCCCCCCcCCHHHHHHHHH
Confidence 999999999998889999999999999999999999997533221110 0111110 000 1123578999999
Q ss_pred hcCCChhhHHhHHHHHHH
Q 042825 605 TIQLDEENLANVSTVAEL 622 (631)
Q Consensus 605 ~L~~d~~~r~~~~~vl~l 622 (631)
++..+|+.|+++.++++.
T Consensus 236 ~l~~~P~~Rp~~~eil~~ 253 (279)
T cd06619 236 CMRKQPKERPAPENLMDH 253 (279)
T ss_pred HhhCChhhCCCHHHHhcC
Confidence 999999999999988754
|
Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p |
| >cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin | Back alignment and domain information |
|---|
Probab=99.81 E-value=2.3e-19 Score=183.90 Aligned_cols=208 Identities=20% Similarity=0.256 Sum_probs=141.6
Q ss_pred cCHHHHHhhcCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc--------------
Q 042825 408 IPIQVLRNATNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK-------------- 472 (631)
Q Consensus 408 ~~~~~l~~~t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~-------------- 472 (631)
+.++.+..++++|+..+.||+|+||.||+++.. +++.+|+|++..... ...++.+|+.++.+
T Consensus 8 ~~~~~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~---~~~~~~~e~~~l~~l~~h~~i~~~~~~~ 84 (286)
T cd06638 8 IIFDSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIHD---IDEEIEAEYNILKALSDHPNVVKFYGMY 84 (286)
T ss_pred EEeecCCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeeccccc---hHHHHHHHHHHHHHHhcCCCeeeeeeee
Confidence 445666778999999999999999999999865 588999998764321 22456666655433
Q ss_pred --------------------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCc
Q 042825 473 --------------------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDM 508 (631)
Q Consensus 473 --------------------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~ 508 (631)
++|.+++..+. .....+++.....++.+++++ +.+
T Consensus 85 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~~~ 163 (286)
T cd06638 85 YKKDVKNGDQLWLVLELCNGGSVTDLVKGFL-KRGERMEEPIIAYILHEALMGLQHLHVNKTIHRDVKGNNILLTTEGGV 163 (286)
T ss_pred eecccCCCCeEEEEEeecCCCCHHHHHHHhh-ccCccccHHHHHHHHHHHHHHHHHHHhCCccccCCCHHhEEECCCCCE
Confidence 34444443221 112346666666676666654 457
Q ss_pred EEEeeccccccCCCCccccccccccCccccccccccc-----CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHH
Q 042825 509 RVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVT-----GRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIH 583 (631)
Q Consensus 509 kl~DFGla~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-----~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~ 583 (631)
||+|||+++.+.... .......|+..|+|||++.. ..++.++||||+||++|||++|+.||....... ....
T Consensus 164 kl~dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~-~~~~ 240 (286)
T cd06638 164 KLVDFGVSAQLTSTR--LRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMR-ALFK 240 (286)
T ss_pred EEccCCceeecccCC--CccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchhH-HHhh
Confidence 899999998764221 12234568999999998753 447899999999999999999999997543221 1111
Q ss_pred HHHHhHhhh----cCChhHHHHHHhhcCCChhhHHhHHHHHHH
Q 042825 584 LATWFQKMH----KNHDTFQMAIDKTIQLDEENLANVSTVAEL 622 (631)
Q Consensus 584 l~~~~~~~~----~~~~~l~~~id~~L~~d~~~r~~~~~vl~l 622 (631)
......... ....++.+++.+|+..+|++|+++.++++.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~ 283 (286)
T cd06638 241 IPRNPPPTLHQPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQH 283 (286)
T ss_pred ccccCCCcccCCCCcCHHHHHHHHHHccCCcccCCCHHHHhhc
Confidence 111111111 113578999999999999999999998763
|
Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear |
| >cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5 | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.8e-19 Score=182.76 Aligned_cols=195 Identities=18% Similarity=0.291 Sum_probs=137.3
Q ss_pred cCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc-----------------------
Q 042825 417 TNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK----------------------- 472 (631)
Q Consensus 417 t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~----------------------- 472 (631)
.++|+..+.||+|+||.||+|+.. +++.||+|++..... .....+.+|+.++.+
T Consensus 8 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~--~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~ 85 (267)
T cd06646 8 QHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPG--DDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICM 85 (267)
T ss_pred hhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCcc--chHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEE
Confidence 346888999999999999999964 688999999875432 234567788887765
Q ss_pred -----CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCC
Q 042825 473 -----GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENG 523 (631)
Q Consensus 473 -----gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~ 523 (631)
++|.++++. ...+++.....++.+++.+ +.++|+|||+++......
T Consensus 86 e~~~~~~L~~~~~~-----~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~ 160 (267)
T cd06646 86 EYCGGGSLQDIYHV-----TGPLSELQIAYVCRETLQGLAYLHSKGKMHRDIKGANILLTDNGDVKLADFGVAAKITATI 160 (267)
T ss_pred eCCCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCCEEECcCccceeecccc
Confidence 455554431 2356777777777777655 357899999998663211
Q ss_pred ccccccccccCcccccccccc---cCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHH--HhH----hhhcC
Q 042825 524 KHSILTKVAGTFGYLAPEYIV---TGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLAT--WFQ----KMHKN 594 (631)
Q Consensus 524 ~~~~~~~~~gt~~Y~aPE~~~---~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~--~~~----~~~~~ 594 (631)
.......|+..|+|||.+. ...++.++|||||||++|||++|+.||........ ...+.. +.. .....
T Consensus 161 --~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 237 (267)
T cd06646 161 --AKRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRA-LFLMSKSNFQPPKLKDKTKW 237 (267)
T ss_pred --cccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhh-heeeecCCCCCCCCcccccc
Confidence 1223456889999999874 34578899999999999999999999864332111 011100 000 01112
Q ss_pred ChhHHHHHHhhcCCChhhHHhHHHHHH
Q 042825 595 HDTFQMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 595 ~~~l~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
+..+.+++.+++..+|++|+++.++++
T Consensus 238 ~~~~~~li~~~l~~~P~~Rp~~~~il~ 264 (267)
T cd06646 238 SSTFHNFVKISLTKNPKKRPTAERLLT 264 (267)
T ss_pred CHHHHHHHHHHhhCChhhCcCHHHHhc
Confidence 457899999999999999999998875
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated |
| >KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.5e-19 Score=172.60 Aligned_cols=193 Identities=20% Similarity=0.320 Sum_probs=128.4
Q ss_pred cceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhcCC--------------------------
Q 042825 422 EENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTKGT-------------------------- 474 (631)
Q Consensus 422 ~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~gs-------------------------- 474 (631)
....||.|+.|.|+|++.+ .|..+|||.+.... +..+.+++...++++.+..
T Consensus 96 ~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~-Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcMelMs 174 (391)
T KOG0983|consen 96 NLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTG-NKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICMELMS 174 (391)
T ss_pred hHHhhcCCCccceEEEEEcccceEEEEEeecccC-CHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHHHHHH
Confidence 4578999999999999976 48999999998754 3445677777777765511
Q ss_pred -hhHHhHhhhhcCCCCCCHHHH-----------------HHHHHHhhc--------CCCcEEEeeccccccCCCCccccc
Q 042825 475 -LGRHLFNWEEEGLEPLEWNTR-----------------LNIALDVAR--------GDDMRVADFGLVRLVPENGKHSIL 528 (631)
Q Consensus 475 -L~~~L~~~~~~~~~~L~~~~~-----------------~~I~~~ia~--------g~~~kl~DFGla~~~~~~~~~~~~ 528 (631)
-.+-|.. ....++...-. ..|++...+ .+++|++|||++..+.+. ...
T Consensus 175 ~C~ekLlk---rik~piPE~ilGk~tva~v~AL~YLKeKH~viHRDvKPSNILlDe~GniKlCDFGIsGrlvdS---kAh 248 (391)
T KOG0983|consen 175 TCAEKLLK---RIKGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDS---KAH 248 (391)
T ss_pred HHHHHHHH---HhcCCchHHhhhhhHHHHHHHHHHHHHhcceeecccCccceEEccCCCEEeecccccceeecc---ccc
Confidence 0011100 00111111100 011111111 178999999999877422 234
Q ss_pred cccccCcccccccccccC---CCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHhHhhhc----CChhHHHH
Q 042825 529 TKVAGTFGYLAPEYIVTG---RITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQKMHK----NHDTFQMA 601 (631)
Q Consensus 529 ~~~~gt~~Y~aPE~~~~~---~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~~~~~~----~~~~l~~~ 601 (631)
+...|.+.|||||.+.-. +|+.++|||||||.|+||.||+.||.+...+-+....+..-....++ -+++++++
T Consensus 249 trsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe~ltkvln~ePP~L~~~~gFSp~F~~f 328 (391)
T KOG0983|consen 249 TRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFEVLTKVLNEEPPLLPGHMGFSPDFQSF 328 (391)
T ss_pred ccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccHHHHHHHHhcCCCCCCcccCcCHHHHHH
Confidence 566799999999998643 59999999999999999999999998765443222222221112222 24689999
Q ss_pred HHhhcCCChhhHHhHHHHHH
Q 042825 602 IDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 602 id~~L~~d~~~r~~~~~vl~ 621 (631)
++.||..|+.+||...++++
T Consensus 329 v~~CL~kd~r~RP~Y~~Ll~ 348 (391)
T KOG0983|consen 329 VKDCLTKDHRKRPKYNKLLE 348 (391)
T ss_pred HHHHhhcCcccCcchHHHhc
Confidence 99999999999999887764
|
|
| >cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.81 E-value=5e-19 Score=180.80 Aligned_cols=205 Identities=21% Similarity=0.261 Sum_probs=145.9
Q ss_pred CCcccceeecCCCceEEEEEEecC-Cc----EEEEEEEecCCCCHHHHHHHHHHHHHHhc--------------------
Q 042825 418 NNFSEENRLGRGGVGTVYKGELKD-GT----EVGVKRMELGSVTEQGIAQFESEITVLTK-------------------- 472 (631)
Q Consensus 418 ~~f~~~~~iG~G~fg~Vyk~~~~~-g~----~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~-------------------- 472 (631)
.+|+..+.||+|+||.||+|..++ |. .+|+|.+.... ......++.+|++++.+
T Consensus 7 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 85 (279)
T cd05057 7 TELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREET-SPKANKEILDEAYVMASVDHPHVVRLLGICLSSQVQL 85 (279)
T ss_pred HHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCC-CHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCceEE
Confidence 457778999999999999998653 33 68999886543 23455778899988876
Q ss_pred -------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCC
Q 042825 473 -------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPE 521 (631)
Q Consensus 473 -------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~ 521 (631)
|+|.+++. .....+++.....++.++++| +.+||+|||+++....
T Consensus 86 v~e~~~~g~L~~~l~----~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~di~p~nil~~~~~~~kL~dfg~~~~~~~ 161 (279)
T cd05057 86 ITQLMPLGCLLDYVR----NHKDNIGSQYLLNWCVQIAKGMSYLEEKRLVHRDLAARNVLVKTPQHVKITDFGLAKLLDV 161 (279)
T ss_pred EEecCCCCcHHHHHH----hccCCCCHHHHHHHHHHHHHHHHHHHhCCEEecccCcceEEEcCCCeEEECCCcccccccC
Confidence 45555553 223357888888888888876 4568999999987643
Q ss_pred CCccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChHHHHHHHHHh--HhhhcCChhH
Q 042825 522 NGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT-GRKVVDATHSDPEYIIHLATWF--QKMHKNHDTF 598 (631)
Q Consensus 522 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~Ellt-G~~P~~~~~~~~~~~~~l~~~~--~~~~~~~~~l 598 (631)
...........++..|+|||.+....++.++|||||||++||+++ |+.||+.....+ ....+.... ......+.++
T Consensus 162 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 240 (279)
T cd05057 162 DEKEYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAVE-IPDLLEKGERLPQPPICTIDV 240 (279)
T ss_pred cccceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHHH-HHHHHhCCCCCCCCCCCCHHH
Confidence 222111222334678999999988889999999999999999999 999998653321 111111110 0111123578
Q ss_pred HHHHHhhcCCChhhHHhHHHHHHHHHhhhc
Q 042825 599 QMAIDKTIQLDEENLANVSTVAELGDHCCA 628 (631)
Q Consensus 599 ~~~id~~L~~d~~~r~~~~~vl~lal~C~~ 628 (631)
.+++.+++..+|..||++.++++....+.+
T Consensus 241 ~~~~~~~l~~~p~~Rp~~~~l~~~l~~~~~ 270 (279)
T cd05057 241 YMVLVKCWMIDAESRPTFKELINEFSKMAR 270 (279)
T ss_pred HHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence 899999999999999999998887666544
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea |
| >cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10 | Back alignment and domain information |
|---|
Probab=99.81 E-value=5.9e-19 Score=179.12 Aligned_cols=199 Identities=23% Similarity=0.348 Sum_probs=140.7
Q ss_pred CcccceeecCCCceEEEEEEecC--CcEEEEEEEecCC--------CCHHHHHHHHHHHHHHhc----------------
Q 042825 419 NFSEENRLGRGGVGTVYKGELKD--GTEVGVKRMELGS--------VTEQGIAQFESEITVLTK---------------- 472 (631)
Q Consensus 419 ~f~~~~~iG~G~fg~Vyk~~~~~--g~~vAvK~l~~~~--------~~~~~~~~~~~Ei~~l~~---------------- 472 (631)
+|+..+.||+|+||.||+|+.+. ++.+|+|.+.... .......++.+|+.++.+
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 80 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE 80 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence 47778999999999999999765 6889999886422 122345567788887753
Q ss_pred -------------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC-------------------------CCcEEEeec
Q 042825 473 -------------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG-------------------------DDMRVADFG 514 (631)
Q Consensus 473 -------------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g-------------------------~~~kl~DFG 514 (631)
+++.+++... ......+++.....++.+++.+ +.+||+|||
T Consensus 81 ~~~~~lv~e~~~~~~l~~~l~~~-~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~i~H~dl~~~nil~~~~~~~~l~dfg 159 (269)
T cd08528 81 NDRLYIVMDLIEGAPLGEHFNSL-KEKKQRFTEERIWNIFVQMVLALRYLHKEKRIVHRDLTPNNIMLGEDDKVTITDFG 159 (269)
T ss_pred CCeEEEEEecCCCCcHHHHHHHH-HhccCCCCHHHHHHHHHHHHHHHHHhccCCceeecCCCHHHEEECCCCcEEEeccc
Confidence 3555554321 1223457777777777776654 347899999
Q ss_pred cccccCCCCccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHhHhhh--
Q 042825 515 LVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQKMH-- 592 (631)
Q Consensus 515 la~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~~~~~-- 592 (631)
++....... ......|+..|+|||+..+..++.++||||||+++|||++|+.||....... ....+........
T Consensus 160 ~~~~~~~~~---~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~~-~~~~~~~~~~~~~~~ 235 (269)
T cd08528 160 LAKQKQPES---KLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNMLS-LATKIVEAVYEPLPE 235 (269)
T ss_pred ceeeccccc---ccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCHHH-HHHHHhhccCCcCCc
Confidence 998764221 2345678999999999998889999999999999999999999997542211 1111111111111
Q ss_pred -cCChhHHHHHHhhcCCChhhHHhHHHHHHH
Q 042825 593 -KNHDTFQMAIDKTIQLDEENLANVSTVAEL 622 (631)
Q Consensus 593 -~~~~~l~~~id~~L~~d~~~r~~~~~vl~l 622 (631)
..+..+.+++.+|+..||..||++.++...
T Consensus 236 ~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~ 266 (269)
T cd08528 236 GMYSEDVTDVITSCLTPDAEARPDIIQVSAM 266 (269)
T ss_pred ccCCHHHHHHHHHHCCCCCccCCCHHHHHHH
Confidence 124679999999999999999999988754
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. |
| >cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase | Back alignment and domain information |
|---|
Probab=99.81 E-value=4.8e-19 Score=183.11 Aligned_cols=197 Identities=19% Similarity=0.326 Sum_probs=137.0
Q ss_pred CCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc------------------------
Q 042825 418 NNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK------------------------ 472 (631)
Q Consensus 418 ~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~------------------------ 472 (631)
++|...+.||+|+||.||+|+.+ +++.||+|.+...... .....+.+|++++.+
T Consensus 6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~e 84 (301)
T cd07873 6 ETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEE-GAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFE 84 (301)
T ss_pred cceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEeccccc-CchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEEe
Confidence 56888999999999999999876 5889999998754322 223456778888765
Q ss_pred ---CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCCcc
Q 042825 473 ---GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENGKH 525 (631)
Q Consensus 473 ---gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~~~ 525 (631)
+++.+++. .....+.+.....++.+++++ +.+||+|||+++......
T Consensus 85 ~~~~~l~~~l~----~~~~~~~~~~~~~~~~qi~~aL~~lH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~-- 158 (301)
T cd07873 85 YLDKDLKQYLD----DCGNSINMHNVKLFLFQLLRGLNYCHRRKVLHRDLKPQNLLINERGELKLADFGLARAKSIPT-- 158 (301)
T ss_pred ccccCHHHHHH----hcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHHHEEECCCCcEEECcCcchhccCCCC--
Confidence 34444332 223356777777777777765 467899999997653211
Q ss_pred ccccccccCcccccccccccC-CCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHH--------HHhH-------
Q 042825 526 SILTKVAGTFGYLAPEYIVTG-RITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLA--------TWFQ------- 589 (631)
Q Consensus 526 ~~~~~~~gt~~Y~aPE~~~~~-~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~--------~~~~------- 589 (631)
.......++..|+|||++.+. .++.++|||||||++|||+||+.||......+....... .|..
T Consensus 159 ~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (301)
T cd07873 159 KTYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEF 238 (301)
T ss_pred CcccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChhhchhhhccccc
Confidence 122344678999999988654 478899999999999999999999976432211100000 0100
Q ss_pred --------------h-hhcCChhHHHHHHhhcCCChhhHHhHHHHHH
Q 042825 590 --------------K-MHKNHDTFQMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 590 --------------~-~~~~~~~l~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
. ....+.++.++|.+||..||.+|+++.++++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~ 285 (301)
T cd07873 239 KSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMK 285 (301)
T ss_pred cccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 0 0012356789999999999999999998875
|
Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl |
| >cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2 | Back alignment and domain information |
|---|
Probab=99.80 E-value=5.3e-19 Score=179.13 Aligned_cols=197 Identities=20% Similarity=0.305 Sum_probs=136.6
Q ss_pred CCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCC---CHHHHHHHHHHHHHHhc---------------------
Q 042825 418 NNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSV---TEQGIAQFESEITVLTK--------------------- 472 (631)
Q Consensus 418 ~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~---~~~~~~~~~~Ei~~l~~--------------------- 472 (631)
.+|...+.||+|+||.||+|+.. +|..||||.+..... .....+.+.+|++++.+
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTL 81 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceE
Confidence 47888999999999999999965 589999999864321 22345678889888775
Q ss_pred ---------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeecccccc
Q 042825 473 ---------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLV 519 (631)
Q Consensus 473 ---------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~ 519 (631)
++|.+++.. ...+++....+++.+++.+ +.++|+|||+++..
T Consensus 82 ~~v~e~~~~~~L~~~l~~-----~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~l~Dfg~~~~~ 156 (265)
T cd06652 82 SIFMEHMPGGSIKDQLKS-----YGALTENVTRKYTRQILEGVSYLHSNMIVHRDIKGANILRDSVGNVKLGDFGASKRL 156 (265)
T ss_pred EEEEEecCCCcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEecCCCCEEECcCcccccc
Confidence 333333321 1346666677777777765 45789999999865
Q ss_pred CCCCc-cccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHh-Hhh--hcCC
Q 042825 520 PENGK-HSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWF-QKM--HKNH 595 (631)
Q Consensus 520 ~~~~~-~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~-~~~--~~~~ 595 (631)
..... ........|+..|+|||++.+..++.++|||||||++|||++|+.||....... ....+.... ... ....
T Consensus 157 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 235 (265)
T cd06652 157 QTICLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAMA-AIFKIATQPTNPVLPPHVS 235 (265)
T ss_pred ccccccccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccchHH-HHHHHhcCCCCCCCchhhC
Confidence 32111 111234568999999999988889999999999999999999999997542211 111111110 010 1123
Q ss_pred hhHHHHHHhhcCCChhhHHhHHHHHH
Q 042825 596 DTFQMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 596 ~~l~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
..+.+++.+++. +|+.|+++.++++
T Consensus 236 ~~~~~~i~~~l~-~p~~Rp~~~~il~ 260 (265)
T cd06652 236 DHCRDFLKRIFV-EAKLRPSADELLR 260 (265)
T ss_pred HHHHHHHHHHhc-ChhhCCCHHHHhc
Confidence 567899999984 8999999988764
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re |
| >cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Probab=99.80 E-value=3.8e-19 Score=186.87 Aligned_cols=208 Identities=23% Similarity=0.280 Sum_probs=145.8
Q ss_pred CCcccceeecCCCceEEEEEEec--------CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc-----------------
Q 042825 418 NNFSEENRLGRGGVGTVYKGELK--------DGTEVGVKRMELGSVTEQGIAQFESEITVLTK----------------- 472 (631)
Q Consensus 418 ~~f~~~~~iG~G~fg~Vyk~~~~--------~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~----------------- 472 (631)
.+|...+.||+|+||.||+++.. .+..||+|.+... ......+++.+|++++.+
T Consensus 12 ~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~ 90 (334)
T cd05100 12 TRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDD-ATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 90 (334)
T ss_pred hHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccc-cCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEccC
Confidence 35788899999999999999742 1247899987643 234456788889888754
Q ss_pred ------------CChhHHhHhhhh-----------cCCCCCCHHHHHHHHHHhhcC------------------------
Q 042825 473 ------------GTLGRHLFNWEE-----------EGLEPLEWNTRLNIALDVARG------------------------ 505 (631)
Q Consensus 473 ------------gsL~~~L~~~~~-----------~~~~~L~~~~~~~I~~~ia~g------------------------ 505 (631)
|+|.+++..... .....+.|..++.++.++++|
T Consensus 91 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Nill~~~ 170 (334)
T cd05100 91 GPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQKCIHRDLAARNVLVTED 170 (334)
T ss_pred CceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEcCC
Confidence 567666653211 112357888888888888765
Q ss_pred CCcEEEeeccccccCCCCccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChHHHHHH
Q 042825 506 DDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT-GRKVVDATHSDPEYIIHL 584 (631)
Q Consensus 506 ~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~Ellt-G~~P~~~~~~~~~~~~~l 584 (631)
+.+||+|||+++...............++..|+|||++.+..++.++|||||||++|||++ |+.||......+ ....+
T Consensus 171 ~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~-~~~~~ 249 (334)
T cd05100 171 NVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEE-LFKLL 249 (334)
T ss_pred CcEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCCHHH-HHHHH
Confidence 4578999999987642221111223345678999999988889999999999999999998 889987543221 11111
Q ss_pred HHHhH--hhhcCChhHHHHHHhhcCCChhhHHhHHHHHHHHHhhh
Q 042825 585 ATWFQ--KMHKNHDTFQMAIDKTIQLDEENLANVSTVAELGDHCC 627 (631)
Q Consensus 585 ~~~~~--~~~~~~~~l~~~id~~L~~d~~~r~~~~~vl~lal~C~ 627 (631)
..... .......++.+++.+|+..+|.+|+++.++++....+.
T Consensus 250 ~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~l~~~~ 294 (334)
T cd05100 250 KEGHRMDKPANCTHELYMIMRECWHAVPSQRPTFKQLVEDLDRVL 294 (334)
T ss_pred HcCCCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHh
Confidence 11111 01112457899999999999999999999988766554
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3 | Back alignment and domain information |
|---|
Probab=99.80 E-value=3.1e-19 Score=180.93 Aligned_cols=196 Identities=18% Similarity=0.303 Sum_probs=136.9
Q ss_pred cCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc-----------------------
Q 042825 417 TNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK----------------------- 472 (631)
Q Consensus 417 t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~----------------------- 472 (631)
.++|...+.||+|+||.||+|+.. +++.||+|.++... ......+.+|+.++..
T Consensus 8 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~ 85 (267)
T cd06645 8 QEDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEP--GEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICM 85 (267)
T ss_pred HHHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCc--hhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEE
Confidence 346778899999999999999865 58899999987543 2234567788877764
Q ss_pred -----CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCC
Q 042825 473 -----GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENG 523 (631)
Q Consensus 473 -----gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~ 523 (631)
++|.+++.. ...++......++.+++.| +.++|+|||++......
T Consensus 86 e~~~~~~L~~~~~~-----~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~- 159 (267)
T cd06645 86 EFCGGGSLQDIYHV-----TGPLSESQIAYVSRETLQGLYYLHSKGKMHRDIKGANILLTDNGHVKLADFGVSAQITAT- 159 (267)
T ss_pred eccCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECcceeeeEccCc-
Confidence 455554432 2346777777777776654 45789999999765321
Q ss_pred ccccccccccCcccccccccc---cCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHH-HhHh----hhcCC
Q 042825 524 KHSILTKVAGTFGYLAPEYIV---TGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLAT-WFQK----MHKNH 595 (631)
Q Consensus 524 ~~~~~~~~~gt~~Y~aPE~~~---~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~-~~~~----~~~~~ 595 (631)
........|+..|+|||++. ...++.++||||+||++|||++|+.||............... .... ....+
T Consensus 160 -~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (267)
T cd06645 160 -IAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMTKSNFQPPKLKDKMKWS 238 (267)
T ss_pred -ccccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhhHHhhhccCCCCCcccccCCCC
Confidence 11223457899999999874 445889999999999999999999998654322111110000 0000 11123
Q ss_pred hhHHHHHHhhcCCChhhHHhHHHHHH
Q 042825 596 DTFQMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 596 ~~l~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
..+.+++.+++..+|++|+++.++++
T Consensus 239 ~~~~~li~~~l~~~P~~R~~~~~ll~ 264 (267)
T cd06645 239 NSFHHFVKMALTKNPKKRPTAEKLLQ 264 (267)
T ss_pred HHHHHHHHHHccCCchhCcCHHHHhc
Confidence 56889999999999999999988764
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated |
| >cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.80 E-value=4.2e-19 Score=178.73 Aligned_cols=197 Identities=29% Similarity=0.388 Sum_probs=142.2
Q ss_pred eeecCCCceEEEEEEecC----CcEEEEEEEecCCCCHHHHHHHHHHHHHHhc---------------------------
Q 042825 424 NRLGRGGVGTVYKGELKD----GTEVGVKRMELGSVTEQGIAQFESEITVLTK--------------------------- 472 (631)
Q Consensus 424 ~~iG~G~fg~Vyk~~~~~----g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~--------------------------- 472 (631)
+.||+|+||.||+|.... +..||+|.+....... ..+.+.+|++.+..
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~-~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 79 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEE-ERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYME 79 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchh-HHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEecc
Confidence 468999999999999753 7899999997654332 46788889888765
Q ss_pred -CChhHHhHhhhh----cCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCC
Q 042825 473 -GTLGRHLFNWEE----EGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENG 523 (631)
Q Consensus 473 -gsL~~~L~~~~~----~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~ 523 (631)
++|.+++..... .....+++.....++.+++++ +.+||+|||.++......
T Consensus 80 ~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~ 159 (262)
T cd00192 80 GGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKKFVHRDLAARNCLVGEDLVVKISDFGLSRDVYDDD 159 (262)
T ss_pred CCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCCcccCccCcceEEECCCCcEEEccccccccccccc
Confidence 556665543100 003568888888888887765 457899999998875332
Q ss_pred ccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChHHHHHHHH-Hh-HhhhcCChhHHH
Q 042825 524 KHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT-GRKVVDATHSDPEYIIHLAT-WF-QKMHKNHDTFQM 600 (631)
Q Consensus 524 ~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~Ellt-G~~P~~~~~~~~~~~~~l~~-~~-~~~~~~~~~l~~ 600 (631)
.........++..|+|||.+....++.++||||+||++|||++ |+.||....... ....+.. +. ......+.++.+
T Consensus 160 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 238 (262)
T cd00192 160 YYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNEE-VLEYLRKGYRLPKPEYCPDELYE 238 (262)
T ss_pred ccccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCHHH-HHHHHHcCCCCCCCccCChHHHH
Confidence 2222344567889999999988889999999999999999999 699998653221 1111111 10 011122468999
Q ss_pred HHHhhcCCChhhHHhHHHHHHH
Q 042825 601 AIDKTIQLDEENLANVSTVAEL 622 (631)
Q Consensus 601 ~id~~L~~d~~~r~~~~~vl~l 622 (631)
++.+|+..+|.+|+++.++++.
T Consensus 239 li~~~l~~~p~~Rps~~~l~~~ 260 (262)
T cd00192 239 LMLSCWQLDPEDRPTFSELVER 260 (262)
T ss_pred HHHHHccCCcccCcCHHHHHHh
Confidence 9999999999999999998763
|
Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan |
| >cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase | Back alignment and domain information |
|---|
Probab=99.80 E-value=3.5e-19 Score=179.42 Aligned_cols=195 Identities=22% Similarity=0.360 Sum_probs=139.2
Q ss_pred eeecCCCceEEEEEEecC--C--cEEEEEEEecCCCCHHHHHHHHHHHHHHhc---------------------------
Q 042825 424 NRLGRGGVGTVYKGELKD--G--TEVGVKRMELGSVTEQGIAQFESEITVLTK--------------------------- 472 (631)
Q Consensus 424 ~~iG~G~fg~Vyk~~~~~--g--~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~--------------------------- 472 (631)
+.||+|+||.||+|.+.+ + ..||||.+...... ...+++.+|+.++++
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~v~e~~~~ 79 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLS-DIMDDFLKEAAIMHSLDHENLIRLYGVVLTHPLMMVTELAPL 79 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccH-HHHHHHHHHHHHHhhcCCCCccceeEEEcCCeEEEEEEecCC
Confidence 468999999999998653 3 36999999876543 466789999998876
Q ss_pred CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCCcc-cc
Q 042825 473 GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENGKH-SI 527 (631)
Q Consensus 473 gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~~~-~~ 527 (631)
|+|.+++... ....+.|.....++.+++.+ +.+||+|||+++.+...... ..
T Consensus 80 ~~L~~~l~~~---~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~ 156 (257)
T cd05040 80 GSLLDRLRKD---ALGHFLISTLCDYAVQIANGMRYLESKRFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHYVM 156 (257)
T ss_pred CcHHHHHHhc---ccccCcHHHHHHHHHHHHHHHHHHHhCCccccccCcccEEEecCCEEEeccccccccccccccceec
Confidence 4455554321 11467888888888877765 45789999999877432211 11
Q ss_pred ccccccCcccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChHHHHHHHH--HhH-hhhcCChhHHHHHH
Q 042825 528 LTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT-GRKVVDATHSDPEYIIHLAT--WFQ-KMHKNHDTFQMAID 603 (631)
Q Consensus 528 ~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~Ellt-G~~P~~~~~~~~~~~~~l~~--~~~-~~~~~~~~l~~~id 603 (631)
.....++..|+|||++....++.++|||||||++|||++ |+.||......+. ...+.. +.. .....+..+.+++.
T Consensus 157 ~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~li~ 235 (257)
T cd05040 157 EEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQI-LKKIDKEGERLERPEACPQDIYNVML 235 (257)
T ss_pred ccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHH-HHHHHhcCCcCCCCccCCHHHHHHHH
Confidence 223567889999999988899999999999999999999 9999975432211 111111 000 00112367899999
Q ss_pred hhcCCChhhHHhHHHHHHHH
Q 042825 604 KTIQLDEENLANVSTVAELG 623 (631)
Q Consensus 604 ~~L~~d~~~r~~~~~vl~la 623 (631)
+|+..+|++|+++.++++..
T Consensus 236 ~~l~~~p~~Rps~~~~~~~l 255 (257)
T cd05040 236 QCWAHNPADRPTFAALREFL 255 (257)
T ss_pred HHCCCCcccCCCHHHHHHHh
Confidence 99999999999999988753
|
Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and |
| >cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10 | Back alignment and domain information |
|---|
Probab=99.80 E-value=4.1e-19 Score=184.35 Aligned_cols=199 Identities=22% Similarity=0.291 Sum_probs=139.2
Q ss_pred hcCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc----------------------
Q 042825 416 ATNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK---------------------- 472 (631)
Q Consensus 416 ~t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~---------------------- 472 (631)
..++|+..+.||+|+||.||+|+.. +|+.||+|+++...........+.+|++++.+
T Consensus 5 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 84 (309)
T cd07845 5 SVTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIF 84 (309)
T ss_pred cccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEE
Confidence 3467899999999999999999975 58999999987543322223345678877765
Q ss_pred -------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCC
Q 042825 473 -------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPE 521 (631)
Q Consensus 473 -------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~ 521 (631)
+++.+++. .....+.+.....++.+++++ +.+||+|||+++....
T Consensus 85 lv~e~~~~~l~~~l~----~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~~ 160 (309)
T cd07845 85 LVMEYCEQDLASLLD----NMPTPFSESQVKCLMLQLLRGLQYLHENFIIHRDLKVSNLLLTDKGCLKIADFGLARTYGL 160 (309)
T ss_pred EEEecCCCCHHHHHH----hcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECccceeeecCC
Confidence 12222221 122457888888888888765 4678999999987642
Q ss_pred CCccccccccccCccccccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHhH-----------
Q 042825 522 NGKHSILTKVAGTFGYLAPEYIVT-GRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQ----------- 589 (631)
Q Consensus 522 ~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~~----------- 589 (631)
.. .......++..|+|||.+.+ ..++.++||||+||++|||++|+.||....... ....+..+..
T Consensus 161 ~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 237 (309)
T cd07845 161 PA--KPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIE-QLDLIIQLLGTPNESIWPGFS 237 (309)
T ss_pred cc--CCCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHhcCCCChhhchhhh
Confidence 21 12233446788999999865 458899999999999999999999997543321 1111111100
Q ss_pred --------------------hhhcCChhHHHHHHhhcCCChhhHHhHHHHHH
Q 042825 590 --------------------KMHKNHDTFQMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 590 --------------------~~~~~~~~l~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
.....+.++.++|.+|+..||++|+++.++++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~ 289 (309)
T cd07845 238 DLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALE 289 (309)
T ss_pred cccccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence 00012456789999999999999999998875
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing |
| >cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4 | Back alignment and domain information |
|---|
Probab=99.80 E-value=2.9e-19 Score=183.32 Aligned_cols=197 Identities=22% Similarity=0.275 Sum_probs=134.2
Q ss_pred CcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhcC------------------------
Q 042825 419 NFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTKG------------------------ 473 (631)
Q Consensus 419 ~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~g------------------------ 473 (631)
+|...+.||+|+||.||+++.. +++.||+|++...... ....++.+|+.++.+.
T Consensus 5 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e 83 (288)
T cd06616 5 DLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDE-KEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICME 83 (288)
T ss_pred HhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccCh-HHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEe
Confidence 4556688999999999999865 5899999998754332 3556788898877651
Q ss_pred ----ChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC-------------------------CCcEEEeeccccccCCCCc
Q 042825 474 ----TLGRHLFNWEEEGLEPLEWNTRLNIALDVARG-------------------------DDMRVADFGLVRLVPENGK 524 (631)
Q Consensus 474 ----sL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g-------------------------~~~kl~DFGla~~~~~~~~ 524 (631)
++.++...........+.+.....++.+++.+ +.++|+|||+++......
T Consensus 84 ~~~~~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~- 162 (288)
T cd06616 84 LMDISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELKIIHRDVKPSNILLDRNGNIKLCDFGISGQLVDSI- 162 (288)
T ss_pred cccCCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCCeeccCCCHHHEEEccCCcEEEeecchhHHhccCC-
Confidence 11111110001112346666666666655543 357899999998653211
Q ss_pred cccccccccCcccccccccccC---CCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHhH----hhh-----
Q 042825 525 HSILTKVAGTFGYLAPEYIVTG---RITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQ----KMH----- 592 (631)
Q Consensus 525 ~~~~~~~~gt~~Y~aPE~~~~~---~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~~----~~~----- 592 (631)
......|+..|+|||++.+. .++.++|||||||++|||++|+.||..... ....+..... ...
T Consensus 163 --~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 237 (288)
T cd06616 163 --AKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNS---VFDQLTQVVKGDPPILSNSEER 237 (288)
T ss_pred --ccccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcch---HHHHHhhhcCCCCCcCCCcCCC
Confidence 12334688999999998766 689999999999999999999999975431 1111111111 010
Q ss_pred cCChhHHHHHHhhcCCChhhHHhHHHHHHH
Q 042825 593 KNHDTFQMAIDKTIQLDEENLANVSTVAEL 622 (631)
Q Consensus 593 ~~~~~l~~~id~~L~~d~~~r~~~~~vl~l 622 (631)
..+.++.+++..|+..+|++|+++.++++.
T Consensus 238 ~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~ 267 (288)
T cd06616 238 EFSPSFVNFINLCLIKDESKRPKYKELLEH 267 (288)
T ss_pred ccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 124578999999999999999999998764
|
Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates |
| >KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.80 E-value=6.9e-20 Score=172.84 Aligned_cols=201 Identities=20% Similarity=0.245 Sum_probs=146.5
Q ss_pred cCCcccceeecCCCceEEEEEE-ecCCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc-----------------------
Q 042825 417 TNNFSEENRLGRGGVGTVYKGE-LKDGTEVGVKRMELGSVTEQGIAQFESEITVLTK----------------------- 472 (631)
Q Consensus 417 t~~f~~~~~iG~G~fg~Vyk~~-~~~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~----------------------- 472 (631)
.++|.+.+.+|+|||+.||.++ ..++..+|+|++.... .++.+..++|++..++
T Consensus 20 ~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~--~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~ 97 (302)
T KOG2345|consen 20 NKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHS--QEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHE 97 (302)
T ss_pred CceEEEeeeecCCCceeeeeecccCcccchhhheeeccc--hHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCcee
Confidence 3578889999999999999998 6678999999997654 3456777888877655
Q ss_pred ----------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC--------------------------CCcEEEeeccc
Q 042825 473 ----------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG--------------------------DDMRVADFGLV 516 (631)
Q Consensus 473 ----------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g--------------------------~~~kl~DFGla 516 (631)
|++.+++.... .+...++..+.+.|..++++| +..++.|||-+
T Consensus 98 ~yll~Pyy~~Gsl~d~i~~~k-~kg~~~sE~~iL~if~gic~gL~~lH~~~~~yAH~DiKP~NILls~~~~~vl~D~GS~ 176 (302)
T KOG2345|consen 98 AYLLLPYYKRGSLLDEIERLK-IKGNFVSEAQILWIFLGICRGLEALHEKEPPYAHRDIKPANILLSDSGLPVLMDLGSA 176 (302)
T ss_pred EEEEeehhccccHHHHHHHHh-hcCCccCHHHHHHHHHHHHHHHHHHhccCCcccccCCCcceeEecCCCceEEEeccCc
Confidence 77777775532 334568888999999998887 34579999998
Q ss_pred cccCCC--Ccc-----ccccccccCccccccccccc---CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHH--
Q 042825 517 RLVPEN--GKH-----SILTKVAGTFGYLAPEYIVT---GRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHL-- 584 (631)
Q Consensus 517 ~~~~~~--~~~-----~~~~~~~gt~~Y~aPE~~~~---~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l-- 584 (631)
+...-. ... ........|..|.|||.+.- ...++++|||||||+||+|+.|..||+...... ....+
T Consensus 177 ~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~G-gSlaLAv 255 (302)
T KOG2345|consen 177 TQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQQG-GSLALAV 255 (302)
T ss_pred cccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhhcC-CeEEEee
Confidence 765311 000 11223457899999999863 457899999999999999999999997432210 00001
Q ss_pred ----HHHhHhhhcCChhHHHHHHhhcCCChhhHHhHHHHHHH
Q 042825 585 ----ATWFQKMHKNHDTFQMAIDKTIQLDEENLANVSTVAEL 622 (631)
Q Consensus 585 ----~~~~~~~~~~~~~l~~~id~~L~~d~~~r~~~~~vl~l 622 (631)
..|.+. .+.++.+.++|..||++||.+||.+.+++..
T Consensus 256 ~n~q~s~P~~-~~yse~l~~lik~mlqvdP~qRP~i~~ll~~ 296 (302)
T KOG2345|consen 256 QNAQISIPNS-SRYSEALHQLIKSMLQVDPNQRPTIPELLSK 296 (302)
T ss_pred eccccccCCC-CCccHHHHHHHHHHhcCCcccCCCHHHHHHH
Confidence 112211 2245789999999999999999999988753
|
|
| >cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3 | Back alignment and domain information |
|---|
Probab=99.80 E-value=6.3e-19 Score=179.05 Aligned_cols=196 Identities=19% Similarity=0.224 Sum_probs=131.9
Q ss_pred eeecCCCceEEEEEEecC---CcEEEEEEEecCCCCHHHHHHHHHHHHHHhc----------------------------
Q 042825 424 NRLGRGGVGTVYKGELKD---GTEVGVKRMELGSVTEQGIAQFESEITVLTK---------------------------- 472 (631)
Q Consensus 424 ~~iG~G~fg~Vyk~~~~~---g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~---------------------------- 472 (631)
+.||+|+||.||+|...+ +..+|+|+++.... ......|.+|+.++.+
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~ 79 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSAS-VQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPL 79 (269)
T ss_pred CcccccCCceEEEEEEcCCCCceEEEEEecCCCCC-hHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCC
Confidence 368999999999998653 45799998875432 2344578889888765
Q ss_pred CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCCccccc
Q 042825 473 GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENGKHSIL 528 (631)
Q Consensus 473 gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~~~~~~ 528 (631)
|+|.+++...........++.....++.+++++ ..+|++|||+++...........
T Consensus 80 g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~~~ 159 (269)
T cd05087 80 GDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNNFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDYYVTP 159 (269)
T ss_pred CcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCCCcEEECCccccccccCcceeecC
Confidence 677777654222222345666666777777664 35789999999765322221222
Q ss_pred cccccCcccccccccccC-------CCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChHHHHHHHHHhHh-----h--hc
Q 042825 529 TKVAGTFGYLAPEYIVTG-------RITAKVDVYSFGMILMDLIT-GRKVVDATHSDPEYIIHLATWFQK-----M--HK 593 (631)
Q Consensus 529 ~~~~gt~~Y~aPE~~~~~-------~~~~k~DVwS~GvvL~Ellt-G~~P~~~~~~~~~~~~~l~~~~~~-----~--~~ 593 (631)
....++..|+|||++... .++.++|||||||++|||++ |+.||......+. .......... . ..
T Consensus 160 ~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 238 (269)
T cd05087 160 DQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQV-LTYTVREQQLKLPKPRLKLP 238 (269)
T ss_pred CCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHH-HHHHhhcccCCCCCCccCCC
Confidence 345678899999998532 35789999999999999996 9999975433221 1111111100 0 01
Q ss_pred CChhHHHHHHhhcCCChhhHHhHHHHHHH
Q 042825 594 NHDTFQMAIDKTIQLDEENLANVSTVAEL 622 (631)
Q Consensus 594 ~~~~l~~~id~~L~~d~~~r~~~~~vl~l 622 (631)
..+.+.+++..|+ .+|++||++.++.+.
T Consensus 239 ~~~~~~~l~~~c~-~~P~~Rpt~~~l~~~ 266 (269)
T cd05087 239 LSDRWYEVMQFCW-LQPEQRPSAEEVHLL 266 (269)
T ss_pred CChHHHHHHHHHh-cCcccCCCHHHHHHH
Confidence 2356788998888 589999999998764
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells |
| >cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2 | Back alignment and domain information |
|---|
Probab=99.80 E-value=3.8e-19 Score=183.46 Aligned_cols=204 Identities=19% Similarity=0.318 Sum_probs=142.5
Q ss_pred CCcccceeecCCCceEEEEEEec-----------------CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc--------
Q 042825 418 NNFSEENRLGRGGVGTVYKGELK-----------------DGTEVGVKRMELGSVTEQGIAQFESEITVLTK-------- 472 (631)
Q Consensus 418 ~~f~~~~~iG~G~fg~Vyk~~~~-----------------~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~-------- 472 (631)
++|+..+.||+|+||.||+++.. ++..||+|++.... ......+|.+|++++.+
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~-~~~~~~~~~~E~~~l~~l~~~~i~~ 83 (296)
T cd05095 5 KRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDA-NKNARNDFLKEIKIMSRLKDPNIIR 83 (296)
T ss_pred hhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccC-CHHHHHHHHHHHHHHHhCCCCCcce
Confidence 46888899999999999998632 23468999987542 33456789999988866
Q ss_pred --------------------CChhHHhHhhhhc------CCCCCCHHHHHHHHHHhhcC---------------------
Q 042825 473 --------------------GTLGRHLFNWEEE------GLEPLEWNTRLNIALDVARG--------------------- 505 (631)
Q Consensus 473 --------------------gsL~~~L~~~~~~------~~~~L~~~~~~~I~~~ia~g--------------------- 505 (631)
|+|.+++...... ....+++.....++.+++.+
T Consensus 84 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dlkp~Nili 163 (296)
T cd05095 84 LLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLNFVHRDLATRNCLV 163 (296)
T ss_pred EEEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCCeecccCChheEEE
Confidence 5676666532111 11346778888888887765
Q ss_pred ---CCcEEEeeccccccCCCCccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHc--CCCCCCCCCCChHH
Q 042825 506 ---DDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT--GRKVVDATHSDPEY 580 (631)
Q Consensus 506 ---~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~Ellt--G~~P~~~~~~~~~~ 580 (631)
+.++|+|||+++.+.............++..|+|||+.....++.++|||||||++|||++ |..||......+ .
T Consensus 164 ~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~~~-~ 242 (296)
T cd05095 164 GKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQLSDEQ-V 242 (296)
T ss_pred cCCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCccccChHH-H
Confidence 4468999999987642222112223445678999999888889999999999999999998 778886543221 1
Q ss_pred HHHHHHHhHh---------hhcCChhHHHHHHhhcCCChhhHHhHHHHHHHH
Q 042825 581 IIHLATWFQK---------MHKNHDTFQMAIDKTIQLDEENLANVSTVAELG 623 (631)
Q Consensus 581 ~~~l~~~~~~---------~~~~~~~l~~~id~~L~~d~~~r~~~~~vl~la 623 (631)
......+... .......+.+++..|++.||.+||++.++.+..
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l 294 (296)
T cd05095 243 IENTGEFFRDQGRQVYLPKPALCPDSLYKLMLSCWRRNAKERPSFQEIHATL 294 (296)
T ss_pred HHHHHHHHhhccccccCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHH
Confidence 1111111111 111236789999999999999999999988754
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit |
| >cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase | Back alignment and domain information |
|---|
Probab=99.80 E-value=5.3e-19 Score=181.95 Aligned_cols=195 Identities=20% Similarity=0.275 Sum_probs=138.6
Q ss_pred CCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc------------------------
Q 042825 418 NNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK------------------------ 472 (631)
Q Consensus 418 ~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~------------------------ 472 (631)
+.|+..+.||+|+||.||+|+.. +++.||+|.+... .....+++.+|++++.+
T Consensus 12 ~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 89 (292)
T cd06644 12 EVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETK--SEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIMIE 89 (292)
T ss_pred hhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccC--CHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEEEe
Confidence 56788899999999999999976 4889999998754 34456778889887766
Q ss_pred ----CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCCc
Q 042825 473 ----GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENGK 524 (631)
Q Consensus 473 ----gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~~ 524 (631)
+++..++. +....+++.....++.+++.+ +.++|+|||+++.....
T Consensus 90 ~~~~~~l~~~~~----~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~-- 163 (292)
T cd06644 90 FCPGGAVDAIML----ELDRGLTEPQIQVICRQMLEALQYLHSMKIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKT-- 163 (292)
T ss_pred cCCCCcHHHHHH----hhcCCCCHHHHHHHHHHHHHHHHHHhcCCeeecCCCcceEEEcCCCCEEEccCccceecccc--
Confidence 33333332 222457888888888877765 45789999998764311
Q ss_pred cccccccccCcccccccccc-----cCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHhHh----hhcCC
Q 042825 525 HSILTKVAGTFGYLAPEYIV-----TGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQK----MHKNH 595 (631)
Q Consensus 525 ~~~~~~~~gt~~Y~aPE~~~-----~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~~~----~~~~~ 595 (631)
........++..|+|||++. ...++.++|||||||++|||++|+.||....... ....+...... ....+
T Consensus 164 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 242 (292)
T cd06644 164 LQRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMR-VLLKIAKSEPPTLSQPSKWS 242 (292)
T ss_pred ccccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHHH-HHHHHhcCCCccCCCCcccC
Confidence 11223456889999999985 3447889999999999999999999997543221 11111111110 01123
Q ss_pred hhHHHHHHhhcCCChhhHHhHHHHHH
Q 042825 596 DTFQMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 596 ~~l~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
.++.+++.+++..+|++|+++.++++
T Consensus 243 ~~~~~li~~~l~~~p~~Rp~~~~il~ 268 (292)
T cd06644 243 MEFRDFLKTALDKHPETRPSAAQLLE 268 (292)
T ss_pred HHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 57899999999999999999998875
|
Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. |
| >cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase | Back alignment and domain information |
|---|
Probab=99.80 E-value=6.2e-19 Score=181.28 Aligned_cols=192 Identities=19% Similarity=0.242 Sum_probs=139.1
Q ss_pred CCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCC-CHHHHHHHHHHHHHHhc-----------------------
Q 042825 418 NNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSV-TEQGIAQFESEITVLTK----------------------- 472 (631)
Q Consensus 418 ~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~-~~~~~~~~~~Ei~~l~~----------------------- 472 (631)
++|...+.||+|+||.||+++.. +++.||+|.+..... .....+.+.+|++++.+
T Consensus 1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 80 (290)
T cd05580 1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVM 80 (290)
T ss_pred CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEE
Confidence 46888999999999999999976 589999999875432 22345678889988876
Q ss_pred -----CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCC
Q 042825 473 -----GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENG 523 (631)
Q Consensus 473 -----gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~ 523 (631)
++|.+++.. ...+....+..++.+++.+ +.+||+|||+++.....
T Consensus 81 e~~~~~~L~~~~~~-----~~~l~~~~~~~~~~qil~~l~~lH~~~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~- 154 (290)
T cd05580 81 EYVPGGELFSHLRK-----SGRFPEPVARFYAAQVVLALEYLHSLDIVYRDLKPENLLLDSDGYIKITDFGFAKRVKGR- 154 (290)
T ss_pred ecCCCCCHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECCCCCEEEeeCCCccccCCC-
Confidence 444444422 2457777777777777665 45789999999876422
Q ss_pred ccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHH-HhHhhhcCChhHHHHH
Q 042825 524 KHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLAT-WFQKMHKNHDTFQMAI 602 (631)
Q Consensus 524 ~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~-~~~~~~~~~~~l~~~i 602 (631)
.....|++.|+|||.+.+..++.++||||||+++|||++|+.||....... ....+.. ........+..+.+++
T Consensus 155 ----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~li 229 (290)
T cd05580 155 ----TYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNPIQ-IYEKILEGKVRFPSFFSPDAKDLI 229 (290)
T ss_pred ----CCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHhcCCccCCccCCHHHHHHH
Confidence 234578999999999988889999999999999999999999997543211 1111111 1111112246889999
Q ss_pred HhhcCCChhhHH-----hHHHHH
Q 042825 603 DKTIQLDEENLA-----NVSTVA 620 (631)
Q Consensus 603 d~~L~~d~~~r~-----~~~~vl 620 (631)
.+++..+|.+|. ++.+++
T Consensus 230 ~~~l~~~p~~R~~~~~~~~~~l~ 252 (290)
T cd05580 230 RNLLQVDLTKRLGNLKNGVNDIK 252 (290)
T ss_pred HHHccCCHHHccCcccCCHHHHH
Confidence 999999999997 555554
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi |
| >cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.80 E-value=9.5e-19 Score=184.69 Aligned_cols=208 Identities=19% Similarity=0.245 Sum_probs=145.3
Q ss_pred CHHHHHhhcCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhcCCh---hH-------
Q 042825 409 PIQVLRNATNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTKGTL---GR------- 477 (631)
Q Consensus 409 ~~~~l~~~t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~gsL---~~------- 477 (631)
...++..++++|...+.||+|+||.||+|... +++.||+|++..........+.+.+|++++.+-.. -.
T Consensus 8 ~~~~~~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~ 87 (345)
T cd07877 8 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTP 87 (345)
T ss_pred HHHHHhhccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeee
Confidence 34567778899999999999999999999854 68999999997543333345667889888765100 00
Q ss_pred ----------H---------hHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeec
Q 042825 478 ----------H---------LFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFG 514 (631)
Q Consensus 478 ----------~---------L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFG 514 (631)
+ +..+. ....+.+.....++.++++| +.+||+|||
T Consensus 88 ~~~~~~~~~~~lv~~~~~~~L~~~~--~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kl~dfg 165 (345)
T cd07877 88 ARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFG 165 (345)
T ss_pred cccccccccEEEEehhcccCHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEcCCCCEEEeccc
Confidence 0 00000 01347888888888888765 457899999
Q ss_pred cccccCCCCccccccccccCccccccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHH-------
Q 042825 515 LVRLVPENGKHSILTKVAGTFGYLAPEYIVT-GRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLAT------- 586 (631)
Q Consensus 515 la~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~------- 586 (631)
+++.... ......++..|+|||...+ ..++.++|||||||++|||++|+.||........ ...+..
T Consensus 166 ~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~-~~~~~~~~~~~~~ 239 (345)
T cd07877 166 LARHTDD-----EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ-LKLILRLVGTPGA 239 (345)
T ss_pred ccccccc-----cccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHHhCCCCH
Confidence 9986531 1234568899999998866 4688999999999999999999999965432111 111100
Q ss_pred -------------HhHh------------hhcCChhHHHHHHhhcCCChhhHHhHHHHHHHHH
Q 042825 587 -------------WFQK------------MHKNHDTFQMAIDKTIQLDEENLANVSTVAELGD 624 (631)
Q Consensus 587 -------------~~~~------------~~~~~~~l~~~id~~L~~d~~~r~~~~~vl~lal 624 (631)
+... ....+.++.+++.+++..||.+|+++.++++-..
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~ 302 (345)
T cd07877 240 ELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 302 (345)
T ss_pred HHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcChh
Confidence 0000 0112456889999999999999999998876443
|
Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14 |
| >cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.80 E-value=6.7e-20 Score=192.22 Aligned_cols=188 Identities=19% Similarity=0.269 Sum_probs=125.7
Q ss_pred ecCCCceEEEEEEec-CCcEEEEEEEecCCC-CHHHHHHHHHHHHHHhc-------------------------------
Q 042825 426 LGRGGVGTVYKGELK-DGTEVGVKRMELGSV-TEQGIAQFESEITVLTK------------------------------- 472 (631)
Q Consensus 426 iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~-~~~~~~~~~~Ei~~l~~------------------------------- 472 (631)
||+|+||+||+|+.. +++.||||++..... .......+..|..++.+
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~ 80 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG 80 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence 699999999999965 589999999865322 11223344455554432
Q ss_pred CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCCccccc
Q 042825 473 GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENGKHSIL 528 (631)
Q Consensus 473 gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~~~~~~ 528 (631)
|+|..++.. ...+++.....++.+++.| +.+||+|||+++..... ....
T Consensus 81 g~L~~~l~~-----~~~~~~~~~~~~~~qil~al~~LH~~~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~--~~~~ 153 (330)
T cd05586 81 GELFWHLQK-----EGRFSEDRAKFYIAELVLALEHLHKYDIVYRDLKPENILLDATGHIALCDFGLSKANLTD--NKTT 153 (330)
T ss_pred ChHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEecCCcCcCCCCC--CCCc
Confidence 344443321 2346777777777777665 46789999999764321 1223
Q ss_pred cccccCcccccccccccC-CCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHH-HhHhh-hcCChhHHHHHHhh
Q 042825 529 TKVAGTFGYLAPEYIVTG-RITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLAT-WFQKM-HKNHDTFQMAIDKT 605 (631)
Q Consensus 529 ~~~~gt~~Y~aPE~~~~~-~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~-~~~~~-~~~~~~l~~~id~~ 605 (631)
...+||..|+|||++.+. .++.++||||+||++|||+||+.||......+. ...+.. ..+.. ...++++.+++.++
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~~li~~~ 232 (330)
T cd05586 154 NTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQM-YRNIAFGKVRFPKNVLSDEGRQFVKGL 232 (330)
T ss_pred cCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCHHHH-HHHHHcCCCCCCCccCCHHHHHHHHHH
Confidence 456799999999998765 489999999999999999999999976432211 111110 00000 11246789999999
Q ss_pred cCCChhhHH----hHHHHHH
Q 042825 606 IQLDEENLA----NVSTVAE 621 (631)
Q Consensus 606 L~~d~~~r~----~~~~vl~ 621 (631)
|..||.+|+ ++.++++
T Consensus 233 L~~~P~~R~~~~~~~~~ll~ 252 (330)
T cd05586 233 LNRNPQHRLGAHRDAVELKE 252 (330)
T ss_pred cCCCHHHCCCCCCCHHHHhc
Confidence 999999997 4555544
|
Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of |
| >cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.80 E-value=4.5e-19 Score=180.07 Aligned_cols=201 Identities=21% Similarity=0.279 Sum_probs=139.2
Q ss_pred hhcCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc---------------------
Q 042825 415 NATNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK--------------------- 472 (631)
Q Consensus 415 ~~t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~--------------------- 472 (631)
.++++|+..+.||+|+||.||+|+.+ +++.+++|++.... ...+++.+|++++.+
T Consensus 3 ~~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~---~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~ 79 (275)
T cd06608 3 DPTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIE---DEEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPG 79 (275)
T ss_pred CchhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCc---hhHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCC
Confidence 46789999999999999999999975 57899999987543 234678888887764
Q ss_pred --------------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeec
Q 042825 473 --------------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFG 514 (631)
Q Consensus 473 --------------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFG 514 (631)
++|.+++... .+....+++.....++.+++.+ +.+||+|||
T Consensus 80 ~~~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~~l~p~ni~~~~~~~~~l~d~~ 158 (275)
T cd06608 80 NDDQLWLVMELCGGGSVTDLVKGL-RKKGKRLKEEWIAYILRETLRGLAYLHENKVIHRDIKGQNILLTKNAEVKLVDFG 158 (275)
T ss_pred cceEEEEEEEcCCCCcHHHHHHHH-hhcCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEEccCCeEEECCCc
Confidence 1222222110 1112457777777787777765 457899999
Q ss_pred cccccCCCCccccccccccCccccccccccc-----CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHhH
Q 042825 515 LVRLVPENGKHSILTKVAGTFGYLAPEYIVT-----GRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQ 589 (631)
Q Consensus 515 la~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-----~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~~ 589 (631)
++...... ........|+..|+|||++.. ..++.++|||||||++|||++|+.||..................
T Consensus 159 ~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~ 236 (275)
T cd06608 159 VSAQLDST--LGRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMRALFKIPRNPPP 236 (275)
T ss_pred cceecccc--hhhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchHHHHHHhhccCCC
Confidence 99765321 122234568999999998753 34788999999999999999999999754322111111111010
Q ss_pred hhh---cCChhHHHHHHhhcCCChhhHHhHHHHHH
Q 042825 590 KMH---KNHDTFQMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 590 ~~~---~~~~~l~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
... ...+++.+++.+|+..||.+|+++.++++
T Consensus 237 ~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~ 271 (275)
T cd06608 237 TLKSPENWSKKFNDFISECLIKNYEQRPFMEELLE 271 (275)
T ss_pred CCCchhhcCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence 100 12357899999999999999999998875
|
Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I |
| >PLN00009 cyclin-dependent kinase A; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=7e-19 Score=181.16 Aligned_cols=199 Identities=19% Similarity=0.277 Sum_probs=136.1
Q ss_pred CCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc------------------------
Q 042825 418 NNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK------------------------ 472 (631)
Q Consensus 418 ~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~------------------------ 472 (631)
++|+..+.||+|++|+||+|+.+ +|+.||+|++..........+.+.+|++++++
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 81 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFE 81 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEEe
Confidence 57888999999999999999976 68999999986544333344667888888876
Q ss_pred ---CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC-------------------------CCcEEEeeccccccCCCCc
Q 042825 473 ---GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG-------------------------DDMRVADFGLVRLVPENGK 524 (631)
Q Consensus 473 ---gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g-------------------------~~~kl~DFGla~~~~~~~~ 524 (631)
+++.+++.. .....+++.....++.+++.| ..+||+|||+++.....
T Consensus 82 ~~~~~l~~~~~~---~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~-- 156 (294)
T PLN00009 82 YLDLDLKKHMDS---SPDFAKNPRLIKTYLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIP-- 156 (294)
T ss_pred cccccHHHHHHh---CCCCCcCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCcceEEEECCCCEEEEcccccccccCCC--
Confidence 233333311 111224555555666666543 34789999999865321
Q ss_pred cccccccccCcccccccccccC-CCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHh---------------
Q 042825 525 HSILTKVAGTFGYLAPEYIVTG-RITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWF--------------- 588 (631)
Q Consensus 525 ~~~~~~~~gt~~Y~aPE~~~~~-~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~--------------- 588 (631)
........++..|+|||++.+. .++.++||||+||++|||+||+.||....... ....+..+.
T Consensus 157 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 235 (294)
T PLN00009 157 VRTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEID-ELFKIFRILGTPNEETWPGVTSLP 235 (294)
T ss_pred ccccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHhCCCChhhccccccch
Confidence 1122345678999999988664 57899999999999999999999997543221 111111100
Q ss_pred ---H------------hhhcCChhHHHHHHhhcCCChhhHHhHHHHHHH
Q 042825 589 ---Q------------KMHKNHDTFQMAIDKTIQLDEENLANVSTVAEL 622 (631)
Q Consensus 589 ---~------------~~~~~~~~l~~~id~~L~~d~~~r~~~~~vl~l 622 (631)
. .....++++.+++.+++..+|++|+++.++++-
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~~ 284 (294)
T PLN00009 236 DYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALEH 284 (294)
T ss_pred hhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0 001234567899999999999999999988763
|
|
| >PHA03209 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=8.2e-19 Score=186.03 Aligned_cols=191 Identities=20% Similarity=0.271 Sum_probs=132.6
Q ss_pred hcCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc----------------------
Q 042825 416 ATNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK---------------------- 472 (631)
Q Consensus 416 ~t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~---------------------- 472 (631)
...+|...+.||+|+||.||+|+.. +++.||+|...... ...|+.++.+
T Consensus 64 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~~--------~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 135 (357)
T PHA03209 64 ASLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKGT--------TLIEAMLLQNVNHPSVIRMKDTLVSGAITCMV 135 (357)
T ss_pred hhcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCccc--------cHHHHHHHHhCCCCCCcChhheEEeCCeeEEE
Confidence 3457999999999999999999976 47889999754321 2345655554
Q ss_pred -----CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCC
Q 042825 473 -----GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENG 523 (631)
Q Consensus 473 -----gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~ 523 (631)
+++.+++. .....+.|.....|+.+++.| +.+||+|||+++.....
T Consensus 136 ~e~~~~~l~~~l~----~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~- 210 (357)
T PHA03209 136 LPHYSSDLYTYLT----KRSRPLPIDQALIIEKQILEGLRYLHAQRIIHRDVKTENIFINDVDQVCIGDLGAAQFPVVA- 210 (357)
T ss_pred EEccCCcHHHHHH----hccCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEecCccccccccC-
Confidence 44444442 234568899999999888876 45789999999854211
Q ss_pred ccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCC-CCCCCChHH-----HHHHHHHhHh-------
Q 042825 524 KHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVV-DATHSDPEY-----IIHLATWFQK------- 590 (631)
Q Consensus 524 ~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~-~~~~~~~~~-----~~~l~~~~~~------- 590 (631)
.......||..|+|||++.+..++.++|||||||++|||+++..|+ ......... ..++......
T Consensus 211 --~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~f~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 288 (357)
T PHA03209 211 --PAFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTIFEDPPSTPEEYVKSCHSHLLKIISTLKVHPEE 288 (357)
T ss_pred --cccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCccccCCCCcHHHHHHHHHHHHHHHHHHhccChhh
Confidence 1223467999999999999999999999999999999999965554 332111000 0011110000
Q ss_pred -------------------------------hhcCChhHHHHHHhhcCCChhhHHhHHHHHH
Q 042825 591 -------------------------------MHKNHDTFQMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 591 -------------------------------~~~~~~~l~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
......++.++|.+||..||.+|+++.++++
T Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rpta~e~l~ 350 (357)
T PHA03209 289 FPRDPGSRLVRGFIEYASLERQPYTRYPCFQRVNLPIDGEFLVHKMLTFDAAMRPSAEEILN 350 (357)
T ss_pred cCCCCccHHHHHHHhhcccCCCcccccHHHhccCCCchHHHHHHHHHcCCcccCcCHHHHhc
Confidence 0011345667999999999999999999875
|
|
| >cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase | Back alignment and domain information |
|---|
Probab=99.80 E-value=5.5e-19 Score=178.07 Aligned_cols=187 Identities=23% Similarity=0.348 Sum_probs=137.9
Q ss_pred CCcccceeecCCCceEEEEEEecCCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc-------------------------
Q 042825 418 NNFSEENRLGRGGVGTVYKGELKDGTEVGVKRMELGSVTEQGIAQFESEITVLTK------------------------- 472 (631)
Q Consensus 418 ~~f~~~~~iG~G~fg~Vyk~~~~~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~------------------------- 472 (631)
++|...+.||+|+||.||++..+ |..||+|.++... ..+.|.+|+.++.+
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~k~~~~~~----~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e 80 (256)
T cd05082 6 KELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA----TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTE 80 (256)
T ss_pred HhCeeeeeecccCCCeEEEEEEc-CCcEEEEEeCCCc----hHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEEE
Confidence 36788899999999999999875 7889999886432 34678889888766
Q ss_pred ----CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCCc
Q 042825 473 ----GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENGK 524 (631)
Q Consensus 473 ----gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~~ 524 (631)
++|.+++.. .....+.+.....++.+++.+ +.+|++|||+++.....
T Consensus 81 ~~~~~~L~~~~~~---~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~-- 155 (256)
T cd05082 81 YMAKGSLVDYLRS---RGRSVLGGDCLLKFSLDVCEAMEYLEANNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST-- 155 (256)
T ss_pred CCCCCcHHHHHHh---cCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccccchheEEEcCCCcEEecCCccceecccc--
Confidence 345444432 223357888888888888765 45789999999865321
Q ss_pred cccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChHHHHHHHHHhHhh------hcCChh
Q 042825 525 HSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT-GRKVVDATHSDPEYIIHLATWFQKM------HKNHDT 597 (631)
Q Consensus 525 ~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~Ellt-G~~P~~~~~~~~~~~~~l~~~~~~~------~~~~~~ 597 (631)
.....++..|+|||+.....++.++|||||||++|||++ |+.||...... .+..+.... ...+..
T Consensus 156 ---~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~ 227 (256)
T cd05082 156 ---QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK-----DVVPRVEKGYKMDAPDGCPPV 227 (256)
T ss_pred ---CCCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCCHH-----HHHHHHhcCCCCCCCCCCCHH
Confidence 123345678999999988889999999999999999998 99998754221 111221111 112467
Q ss_pred HHHHHHhhcCCChhhHHhHHHHHHH
Q 042825 598 FQMAIDKTIQLDEENLANVSTVAEL 622 (631)
Q Consensus 598 l~~~id~~L~~d~~~r~~~~~vl~l 622 (631)
+.+++.+++..+|++|+++.++++.
T Consensus 228 ~~~li~~~l~~~p~~Rpt~~~l~~~ 252 (256)
T cd05082 228 VYDVMKQCWHLDAATRPSFLQLREQ 252 (256)
T ss_pred HHHHHHHHhcCChhhCcCHHHHHHH
Confidence 8999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re |
| >cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors | Back alignment and domain information |
|---|
Probab=99.80 E-value=6.7e-19 Score=178.81 Aligned_cols=194 Identities=21% Similarity=0.329 Sum_probs=139.7
Q ss_pred CcccceeecCCCceEEEEEEecC-C---cEEEEEEEecCCCCHHHHHHHHHHHHHHhc----------------------
Q 042825 419 NFSEENRLGRGGVGTVYKGELKD-G---TEVGVKRMELGSVTEQGIAQFESEITVLTK---------------------- 472 (631)
Q Consensus 419 ~f~~~~~iG~G~fg~Vyk~~~~~-g---~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~---------------------- 472 (631)
+|+..+.||+|+||.||+|+... + ..||||.+.... .....++|..|++++.+
T Consensus 5 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv 83 (269)
T cd05065 5 CVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGY-TEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMII 83 (269)
T ss_pred HeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCC-CHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceEEE
Confidence 46778999999999999999753 3 369999986542 34566789999998865
Q ss_pred ------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCC
Q 042825 473 ------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPEN 522 (631)
Q Consensus 473 ------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~ 522 (631)
|+|.+++.. ....+++.+...++.+++.+ ..+|++|||+++.....
T Consensus 84 ~e~~~~~~L~~~l~~----~~~~~~~~~~~~i~~~l~~al~~lH~~g~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~ 159 (269)
T cd05065 84 TEFMENGALDSFLRQ----NDGQFTVIQLVGMLRGIAAGMKYLSEMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDD 159 (269)
T ss_pred EecCCCCcHHHHHhh----CCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccChheEEEcCCCcEEECCCccccccccC
Confidence 455555532 23457888888888887765 35689999999876422
Q ss_pred Cccccccc-c--ccCcccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChHHHHHHHHHhHhh------h
Q 042825 523 GKHSILTK-V--AGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT-GRKVVDATHSDPEYIIHLATWFQKM------H 592 (631)
Q Consensus 523 ~~~~~~~~-~--~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~Ellt-G~~P~~~~~~~~~~~~~l~~~~~~~------~ 592 (631)
........ . ..+..|+|||++.+..++.++|||||||++|||++ |+.||...... .+..+.... .
T Consensus 160 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~-----~~~~~i~~~~~~~~~~ 234 (269)
T cd05065 160 TSDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQ-----DVINAIEQDYRLPPPM 234 (269)
T ss_pred ccccccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCHH-----HHHHHHHcCCcCCCcc
Confidence 21111111 1 12457999999998899999999999999999887 99999754322 122222111 1
Q ss_pred cCChhHHHHHHhhcCCChhhHHhHHHHHHH
Q 042825 593 KNHDTFQMAIDKTIQLDEENLANVSTVAEL 622 (631)
Q Consensus 593 ~~~~~l~~~id~~L~~d~~~r~~~~~vl~l 622 (631)
..+..+.+++.+++..+|.+||++.+++..
T Consensus 235 ~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~ 264 (269)
T cd05065 235 DCPTALHQLMLDCWQKDRNARPKFGQIVST 264 (269)
T ss_pred cCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 123578999999999999999999998865
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr |
| >KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.9e-20 Score=195.72 Aligned_cols=195 Identities=20% Similarity=0.285 Sum_probs=139.8
Q ss_pred CcccceeecCCCceEEEEEEecC-CcEEEEEEEecCCCCHHHHHHHHHHHHHHhcCChhH-------HhHh---------
Q 042825 419 NFSEENRLGRGGVGTVYKGELKD-GTEVGVKRMELGSVTEQGIAQFESEITVLTKGTLGR-------HLFN--------- 481 (631)
Q Consensus 419 ~f~~~~~iG~G~fg~Vyk~~~~~-g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~gsL~~-------~L~~--------- 481 (631)
-|++...||.|+||.|||+..++ +-..|.|.+... .....++|.-||++|...+..- |.++
T Consensus 33 ~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetk--seEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliEF 110 (1187)
T KOG0579|consen 33 HWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETK--SEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIEF 110 (1187)
T ss_pred HHHHHhhhcCccchhhhhhhcccchhhhhhhhhccc--chhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEee
Confidence 35567789999999999999775 555677777543 3557789999999998733111 1110
Q ss_pred ------------------------hhhcCCCCCCHHHHHHHHHHhhcC--------CCcEEEeeccccccCCCCcccccc
Q 042825 482 ------------------------WEEEGLEPLEWNTRLNIALDVARG--------DDMRVADFGLVRLVPENGKHSILT 529 (631)
Q Consensus 482 ------------------------~~~~~~~~L~~~~~~~I~~~ia~g--------~~~kl~DFGla~~~~~~~~~~~~~ 529 (631)
...+....|.|.|..+|++...++ ++++++|||++.... .......
T Consensus 111 C~GGAVDaimlEL~r~LtE~QIqvvc~q~ldALn~LHs~~iIHRDLKAGNiL~TldGdirLADFGVSAKn~--~t~qkRD 188 (1187)
T KOG0579|consen 111 CGGGAVDAIMLELGRVLTEDQIQVVCYQVLDALNWLHSQNIIHRDLKAGNILLTLDGDIRLADFGVSAKNK--STRQKRD 188 (1187)
T ss_pred cCCchHhHHHHHhccccchHHHHHHHHHHHHHHHHHhhcchhhhhccccceEEEecCcEeeecccccccch--hHHhhhc
Confidence 011123468888888998887776 667899999975431 2223346
Q ss_pred ccccCcccccccccc-----cCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHhHh----h---hcCChh
Q 042825 530 KVAGTFGYLAPEYIV-----TGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQK----M---HKNHDT 597 (631)
Q Consensus 530 ~~~gt~~Y~aPE~~~-----~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~~~----~---~~~~~~ 597 (631)
.++||++|||||+.+ ..+|+.++|||||||.|.||.-+.+|....... ..+.+..+. + .+-+..
T Consensus 189 sFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnpM----RVllKiaKSePPTLlqPS~Ws~~ 264 (1187)
T KOG0579|consen 189 SFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNPM----RVLLKIAKSEPPTLLQPSHWSRS 264 (1187)
T ss_pred cccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccchH----HHHHHHhhcCCCcccCcchhhhH
Confidence 789999999999875 356999999999999999999999998755432 222222211 1 111357
Q ss_pred HHHHHHhhcCCChhhHHhHHHHHH
Q 042825 598 FQMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 598 l~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
+.|++.+||..+|..|+.+.++++
T Consensus 265 F~DfLk~cL~Knp~~Rp~aaqll~ 288 (1187)
T KOG0579|consen 265 FSDFLKRCLVKNPRNRPPAAQLLK 288 (1187)
T ss_pred HHHHHHHHHhcCCccCCCHHHHhh
Confidence 899999999999999999998875
|
|
| >cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Probab=99.80 E-value=6.9e-19 Score=178.92 Aligned_cols=198 Identities=19% Similarity=0.286 Sum_probs=135.7
Q ss_pred CcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCC--------HHHHHHHHHHHHHHhc-----------------
Q 042825 419 NFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVT--------EQGIAQFESEITVLTK----------------- 472 (631)
Q Consensus 419 ~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~--------~~~~~~~~~Ei~~l~~----------------- 472 (631)
+|...+.||+|+||.||+|... +|+.||+|.++..... ....+.+.+|++++.+
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 81 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEE 81 (272)
T ss_pred ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCC
Confidence 4667789999999999999865 5899999988642111 1123467788887765
Q ss_pred -----------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeecccc
Q 042825 473 -----------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVR 517 (631)
Q Consensus 473 -----------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~ 517 (631)
++|.+++.. ...+++.....++.+++.+ +.++++|||+++
T Consensus 82 ~~~lv~e~~~~~~L~~~l~~-----~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~~~nil~~~~~~~~l~d~~~~~ 156 (272)
T cd06629 82 YLSIFLEYVPGGSIGSCLRT-----YGRFEEQLVRFFTEQVLEGLAYLHSKGILHRDLKADNLLVDADGICKISDFGISK 156 (272)
T ss_pred ceEEEEecCCCCcHHHHHhh-----ccCCCHHHHHHHHHHHHHHHHHHhhCCeeecCCChhhEEEcCCCeEEEeeccccc
Confidence 444444432 1357777777777777654 457899999998
Q ss_pred ccCCCCccccccccccCcccccccccccCC--CCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHhHh-----
Q 042825 518 LVPENGKHSILTKVAGTFGYLAPEYIVTGR--ITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQK----- 590 (631)
Q Consensus 518 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~--~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~~~----- 590 (631)
...............|+..|+|||++.... ++.++||||||+++||+++|+.||......+............
T Consensus 157 ~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (272)
T cd06629 157 KSDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIAAMFKLGNKRSAPPIPPD 236 (272)
T ss_pred cccccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchHHHHHHhhccccCCcCCcc
Confidence 653211111233456899999999987654 8899999999999999999999996432211110000000000
Q ss_pred h-hcCChhHHHHHHhhcCCChhhHHhHHHHHH
Q 042825 591 M-HKNHDTFQMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 591 ~-~~~~~~l~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
. .....++.+++.+|+..+|..|+++.++++
T Consensus 237 ~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 268 (272)
T cd06629 237 VSMNLSPVALDFLNACFTINPDNRPTARELLQ 268 (272)
T ss_pred ccccCCHHHHHHHHHHhcCChhhCCCHHHHhh
Confidence 0 012467899999999999999999998875
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte |
| >cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase | Back alignment and domain information |
|---|
Probab=99.80 E-value=8.5e-19 Score=178.14 Aligned_cols=199 Identities=19% Similarity=0.274 Sum_probs=141.8
Q ss_pred CCcccceeecCCCceEEEEEEecC----CcEEEEEEEecCCCCHHHHHHHHHHHHHHhc---------------------
Q 042825 418 NNFSEENRLGRGGVGTVYKGELKD----GTEVGVKRMELGSVTEQGIAQFESEITVLTK--------------------- 472 (631)
Q Consensus 418 ~~f~~~~~iG~G~fg~Vyk~~~~~----g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~--------------------- 472 (631)
++|...+.||+|+||.||+|...+ ...||||+..... .....+.+.+|+.++++
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~lv 84 (270)
T cd05056 6 EDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCT-SPSVREKFLQEAYIMRQFDHPHIVKLIGVITENPVWIV 84 (270)
T ss_pred hhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcC-CHHHHHHHHHHHHHHHhCCCCchhceeEEEcCCCcEEE
Confidence 357788999999999999998643 3468999886542 24456789999998875
Q ss_pred ------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCC
Q 042825 473 ------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPEN 522 (631)
Q Consensus 473 ------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~ 522 (631)
|+|.+++. .....+++..+..++.+++.+ +.+||+|||+++.....
T Consensus 85 ~e~~~~~~L~~~l~----~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~ 160 (270)
T cd05056 85 MELAPLGELRSYLQ----VNKYSLDLASLILYSYQLSTALAYLESKRFVHRDIAARNVLVSSPDCVKLGDFGLSRYLEDE 160 (270)
T ss_pred EEcCCCCcHHHHHH----hCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccChheEEEecCCCeEEccCceeeecccc
Confidence 44555543 223357898888888888765 45789999999876422
Q ss_pred CccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChHHHHHHHH--HhHhhhcCChhHH
Q 042825 523 GKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT-GRKVVDATHSDPEYIIHLAT--WFQKMHKNHDTFQ 599 (631)
Q Consensus 523 ~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~Ellt-G~~P~~~~~~~~~~~~~l~~--~~~~~~~~~~~l~ 599 (631)
. ....+...++..|+|||.+....++.++|||||||++|||++ |+.||......+ ....+.. ........+..+.
T Consensus 161 ~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 238 (270)
T cd05056 161 S-YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNND-VIGRIENGERLPMPPNCPPTLY 238 (270)
T ss_pred c-ceecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHH-HHHHHHcCCcCCCCCCCCHHHH
Confidence 1 111223345678999999988889999999999999999996 999997654321 1111111 0011112246899
Q ss_pred HHHHhhcCCChhhHHhHHHHHHHH
Q 042825 600 MAIDKTIQLDEENLANVSTVAELG 623 (631)
Q Consensus 600 ~~id~~L~~d~~~r~~~~~vl~la 623 (631)
+++.+++..+|.+|+++.++++..
T Consensus 239 ~li~~~l~~~P~~Rpt~~~~~~~l 262 (270)
T cd05056 239 SLMTKCWAYDPSKRPRFTELKAQL 262 (270)
T ss_pred HHHHHHcCCChhhCcCHHHHHHHH
Confidence 999999999999999999887643
|
Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions |
| >cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.7e-18 Score=177.84 Aligned_cols=199 Identities=22% Similarity=0.271 Sum_probs=141.9
Q ss_pred CCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc------------------------
Q 042825 418 NNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK------------------------ 472 (631)
Q Consensus 418 ~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~------------------------ 472 (631)
++|+..+.||.|++|.||+|... +++.+|+|.+..... .....++.+|++++.+
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv 79 (287)
T cd06621 1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPN-PDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIA 79 (287)
T ss_pred CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCc-hHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEE
Confidence 46888999999999999999975 588999999875432 2355778899998865
Q ss_pred ------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCC
Q 042825 473 ------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPEN 522 (631)
Q Consensus 473 ------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~ 522 (631)
++|.+++.... .....+.......|+.+++.+ ..++|+|||++......
T Consensus 80 ~e~~~~~~L~~~l~~~~-~~~~~l~~~~~~~i~~~i~~~L~~lH~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~ 158 (287)
T cd06621 80 MEYCEGGSLDSIYKKVK-KRGGRIGEKVLGKIAESVLKGLSYLHSRKIIHRDIKPSNILLTRKGQVKLCDFGVSGELVNS 158 (287)
T ss_pred EEecCCCCHHHHHHHHH-hcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEecCCeEEEeecccccccccc
Confidence 34444433211 122346666667777777655 45789999998765321
Q ss_pred CccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHhHh----hhc-----
Q 042825 523 GKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQK----MHK----- 593 (631)
Q Consensus 523 ~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~~~----~~~----- 593 (631)
......++..|+|||.+.+..++.++||||+||++|||++|+.||+...........+..+... ...
T Consensus 159 ----~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (287)
T cd06621 159 ----LAGTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVNMPNPELKDEPGN 234 (287)
T ss_pred ----ccccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhcCCchhhccCCCC
Confidence 1223567889999999988899999999999999999999999998652210111222233221 111
Q ss_pred ---CChhHHHHHHhhcCCChhhHHhHHHHHHH
Q 042825 594 ---NHDTFQMAIDKTIQLDEENLANVSTVAEL 622 (631)
Q Consensus 594 ---~~~~l~~~id~~L~~d~~~r~~~~~vl~l 622 (631)
.++.+.+++..++..+|.+||++.++++.
T Consensus 235 ~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~~ 266 (287)
T cd06621 235 GIKWSEEFKDFIKQCLEKDPTRRPTPWDMLEH 266 (287)
T ss_pred CCchHHHHHHHHHHHcCCCcccCCCHHHHHhC
Confidence 12468899999999999999999998863
|
Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.80 E-value=8.5e-19 Score=175.96 Aligned_cols=193 Identities=24% Similarity=0.319 Sum_probs=134.7
Q ss_pred eeecCCCceEEEEEEecCCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc----------------------------CCh
Q 042825 424 NRLGRGGVGTVYKGELKDGTEVGVKRMELGSVTEQGIAQFESEITVLTK----------------------------GTL 475 (631)
Q Consensus 424 ~~iG~G~fg~Vyk~~~~~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~----------------------------gsL 475 (631)
++||+|+||.||++...+++.||+|++...... ...+.|.+|++++++ +++
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l 79 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPP-DLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGSL 79 (251)
T ss_pred CccccCCCceEEEEEEeCCCcEEEEeccccCCH-HHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCcH
Confidence 468999999999999877999999998765432 456788999988876 344
Q ss_pred hHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCCcccccccc
Q 042825 476 GRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENGKHSILTKV 531 (631)
Q Consensus 476 ~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~~~~~~~~~ 531 (631)
.+++. .....+++.....++.+++.+ +.+||+|||+++..............
T Consensus 80 ~~~l~----~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~ 155 (251)
T cd05041 80 LTFLR----KKKNRLTVKKLLQMSLDAAAGMEYLESKNCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSDGLK 155 (251)
T ss_pred HHHHH----hcCCCCCHHHHHHHHHHHHHHHHHHHhCCEehhhcCcceEEEcCCCcEEEeeccccccccCCcceeccccC
Confidence 44442 222356777777777666543 45789999999865321111111123
Q ss_pred ccCcccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChHHHHHHHHHhHh--hhcCChhHHHHHHhhcCC
Q 042825 532 AGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT-GRKVVDATHSDPEYIIHLATWFQK--MHKNHDTFQMAIDKTIQL 608 (631)
Q Consensus 532 ~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~Ellt-G~~P~~~~~~~~~~~~~l~~~~~~--~~~~~~~l~~~id~~L~~ 608 (631)
.++..|+|||.+.+..++.++|||||||++|||+| |..||....... ....+..-... ....+.++.+++.+++..
T Consensus 156 ~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~ 234 (251)
T cd05041 156 QIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQ-TRERIESGYRMPAPQLCPEEIYRLMLQCWAY 234 (251)
T ss_pred cceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHHH-HHHHHhcCCCCCCCccCCHHHHHHHHHHhcc
Confidence 34677999999988889999999999999999999 888887543221 11111110000 011236789999999999
Q ss_pred ChhhHHhHHHHHHH
Q 042825 609 DEENLANVSTVAEL 622 (631)
Q Consensus 609 d~~~r~~~~~vl~l 622 (631)
+|.+|+++.++++.
T Consensus 235 ~p~~Rp~~~ell~~ 248 (251)
T cd05041 235 DPENRPSFSEIYNE 248 (251)
T ss_pred ChhhCcCHHHHHHH
Confidence 99999999998864
|
Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k |
| >cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4 | Back alignment and domain information |
|---|
Probab=99.80 E-value=6.6e-19 Score=179.80 Aligned_cols=194 Identities=23% Similarity=0.360 Sum_probs=139.0
Q ss_pred CcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc-------------------------
Q 042825 419 NFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK------------------------- 472 (631)
Q Consensus 419 ~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~------------------------- 472 (631)
.|+..+.||+|+||.||+|... ++..||+|.+.... .......+.+|++++.+
T Consensus 5 ~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 83 (277)
T cd06640 5 LFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEE-AEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIMEY 83 (277)
T ss_pred hhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccc-cHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEec
Confidence 4667789999999999999975 58899999987543 23456788899988775
Q ss_pred ---CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCCcc
Q 042825 473 ---GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENGKH 525 (631)
Q Consensus 473 ---gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~~~ 525 (631)
|+|.+++.. ..+++.+...++.+++.+ +.++|+|||+++..... .
T Consensus 84 ~~~~~L~~~i~~------~~l~~~~~~~~~~~l~~~l~~lh~~~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~--~ 155 (277)
T cd06640 84 LGGGSALDLLRA------GPFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDT--Q 155 (277)
T ss_pred CCCCcHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHhCCccCcCCChhhEEEcCCCCEEEcccccceeccCC--c
Confidence 455555531 246666666666666544 45789999999876422 1
Q ss_pred ccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHH-hHhh-hcCChhHHHHHH
Q 042825 526 SILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATW-FQKM-HKNHDTFQMAID 603 (631)
Q Consensus 526 ~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~-~~~~-~~~~~~l~~~id 603 (631)
.......++..|+|||++.+..++.++|||||||++|||+||+.||.......... .+... .... .....++.+++.
T Consensus 156 ~~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~li~ 234 (277)
T cd06640 156 IKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLF-LIPKNNPPTLTGEFSKPFKEFID 234 (277)
T ss_pred cccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhHhh-hhhcCCCCCCchhhhHHHHHHHH
Confidence 12234568889999999988889999999999999999999999997543221111 11000 0000 011356889999
Q ss_pred hhcCCChhhHHhHHHHHHH
Q 042825 604 KTIQLDEENLANVSTVAEL 622 (631)
Q Consensus 604 ~~L~~d~~~r~~~~~vl~l 622 (631)
+|+..+|+.|+++.++++.
T Consensus 235 ~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06640 235 ACLNKDPSFRPTAKELLKH 253 (277)
T ss_pred HHcccCcccCcCHHHHHhC
Confidence 9999999999999988654
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter |
| >cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.80 E-value=9e-19 Score=176.77 Aligned_cols=196 Identities=20% Similarity=0.289 Sum_probs=140.4
Q ss_pred cCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc-----------------------
Q 042825 417 TNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK----------------------- 472 (631)
Q Consensus 417 t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~----------------------- 472 (631)
.++|+..+.||+|+||.||+|... +++.+|+|.+..... ...+.+.+|++++.+
T Consensus 2 ~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~--~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~ 79 (262)
T cd06613 2 QEDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPG--DDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVM 79 (262)
T ss_pred ccceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCch--hhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEE
Confidence 357888999999999999999975 578999999876432 245778889888866
Q ss_pred -----CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCC
Q 042825 473 -----GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENG 523 (631)
Q Consensus 473 -----gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~ 523 (631)
+++.+++. .....++......++.+++.+ +.+||+|||++......
T Consensus 80 e~~~~~~l~~~~~----~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~- 154 (262)
T cd06613 80 EYCGGGSLQDIYQ----VTRGPLSELQIAYVCRETLKGLAYLHETGKIHRDIKGANILLTEDGDVKLADFGVSAQLTAT- 154 (262)
T ss_pred eCCCCCcHHHHHH----hhccCCCHHHHHHHHHHHHHHHHHHHhCCceecCCChhhEEECCCCCEEECccccchhhhhh-
Confidence 34444332 222456777777777776654 45789999999865321
Q ss_pred ccccccccccCcccccccccccC---CCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHH--hH----hhhcC
Q 042825 524 KHSILTKVAGTFGYLAPEYIVTG---RITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATW--FQ----KMHKN 594 (631)
Q Consensus 524 ~~~~~~~~~gt~~Y~aPE~~~~~---~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~--~~----~~~~~ 594 (631)
........++..|+|||.+.+. .++.++|||||||++|||+||+.||......... ..+... .. .....
T Consensus 155 -~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 232 (262)
T cd06613 155 -IAKRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRAL-FLISKSNFPPPKLKDKEKW 232 (262)
T ss_pred -hhccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHH-HHHHhccCCCccccchhhh
Confidence 1122345788999999998776 7899999999999999999999999764422111 111111 00 01111
Q ss_pred ChhHHHHHHhhcCCChhhHHhHHHHHH
Q 042825 595 HDTFQMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 595 ~~~l~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
+.++.+++.+++..+|..|+++.++++
T Consensus 233 ~~~~~~li~~~l~~~p~~Rpt~~~il~ 259 (262)
T cd06613 233 SPVFHDFIKKCLTKDPKKRPTATKLLQ 259 (262)
T ss_pred hHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 356889999999999999999998865
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ |
| >PLN03150 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=6.8e-19 Score=198.22 Aligned_cols=147 Identities=32% Similarity=0.609 Sum_probs=108.7
Q ss_pred CCChhhHHHHHHHHHhCCCCCCCCCCCCCCC-----CccceeeCCC-----CCeEEEEeCCCCCcccCcchhcCCccCce
Q 042825 56 NQSRPDAAVMQDLKASFVIPKRLKWSDPDPC-----QWSHVICSDD-----GQVTNIELQDQNRKGTVPPILKKLSSMAV 125 (631)
Q Consensus 56 ~~~~~~~~~l~~~k~~~~~~~~~~w~~~~~C-----~w~gv~C~~~-----~~l~~l~l~~n~l~g~ip~~~~~l~~L~~ 125 (631)
.+.+.|+.+|+.+|..+..+...+|.+ ++| .|.||.|... ..|+.|+|++|+++|.+|+.++.|++|+.
T Consensus 368 ~t~~~~~~aL~~~k~~~~~~~~~~W~g-~~C~p~~~~w~Gv~C~~~~~~~~~~v~~L~L~~n~L~g~ip~~i~~L~~L~~ 446 (623)
T PLN03150 368 KTLLEEVSALQTLKSSLGLPLRFGWNG-DPCVPQQHPWSGADCQFDSTKGKWFIDGLGLDNQGLRGFIPNDISKLRHLQS 446 (623)
T ss_pred ccCchHHHHHHHHHHhcCCcccCCCCC-CCCCCcccccccceeeccCCCCceEEEEEECCCCCccccCCHHHhCCCCCCE
Confidence 456779999999999997665458965 566 6999999521 24788888888888888888888888888
Q ss_pred eecccCcccCCCCcCcccccccccccccceecCCCCCCcCCCCCCcEEEccCCcccccCCCCCCCCccCcCCCCCCCEEE
Q 042825 126 MYLENNQLRGPIPSLVGSLEFFSAYEANISGTIPDFIGTDTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLS 205 (631)
Q Consensus 126 L~L~~N~l~g~lP~~~~~L~~L~l~~n~l~g~ip~~~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~~~~~~~~l~~L~~L~ 205 (631)
|+|++|+|+|. +|..++ .+++|+.|||++|+|+|.+|..+ ++|++|+.|+
T Consensus 447 L~Ls~N~l~g~---------------------iP~~~~--~l~~L~~LdLs~N~lsg~iP~~l-------~~L~~L~~L~ 496 (623)
T PLN03150 447 INLSGNSIRGN---------------------IPPSLG--SITSLEVLDLSYNSFNGSIPESL-------GQLTSLRILN 496 (623)
T ss_pred EECCCCcccCc---------------------CChHHh--CCCCCCEEECCCCCCCCCCchHH-------hcCCCCCEEE
Confidence 88888877764 444455 67788888888888888888664 4788888888
Q ss_pred eecCcCcccCChhhccCC-CCCCEEEccCC
Q 042825 206 LGHNKLTGIFPVSSFNNH-PKLTTLNLTNN 234 (631)
Q Consensus 206 L~~N~l~g~iP~~~~~~l-~~L~~L~ls~N 234 (631)
|++|+|+|.+|.. ++.+ .++..+++++|
T Consensus 497 Ls~N~l~g~iP~~-l~~~~~~~~~l~~~~N 525 (623)
T PLN03150 497 LNGNSLSGRVPAA-LGGRLLHRASFNFTDN 525 (623)
T ss_pred CcCCcccccCChH-HhhccccCceEEecCC
Confidence 8888888888865 4332 23334444433
|
|
| >cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase | Back alignment and domain information |
|---|
Probab=99.80 E-value=1e-18 Score=176.84 Aligned_cols=196 Identities=24% Similarity=0.317 Sum_probs=139.0
Q ss_pred CCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc------------------------
Q 042825 418 NNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK------------------------ 472 (631)
Q Consensus 418 ~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~------------------------ 472 (631)
++|+..+.||+|+||.||++..+ +++.||+|++..... ....+++.+|++++++
T Consensus 1 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e 79 (265)
T cd06605 1 DDLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEIN-EAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICME 79 (265)
T ss_pred CcchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccC-hHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEE
Confidence 36777889999999999999976 589999999876532 3456778899888765
Q ss_pred ----CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC-------------------------CCcEEEeeccccccCCCC
Q 042825 473 ----GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG-------------------------DDMRVADFGLVRLVPENG 523 (631)
Q Consensus 473 ----gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g-------------------------~~~kl~DFGla~~~~~~~ 523 (631)
++|.+++.. ....+.......++.+++.+ +.++|+|||.+.......
T Consensus 80 ~~~~~~L~~~~~~----~~~~~~~~~~~~~~~~l~~~l~~lH~~~~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~~ 155 (265)
T cd06605 80 YMDGGSLDKILKE----VQGRIPERILGKIAVAVLKGLTYLHEKHKIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSL 155 (265)
T ss_pred ecCCCcHHHHHHH----ccCCCCHHHHHHHHHHHHHHHHHHcCCCCeecCCCCHHHEEECCCCCEEEeecccchhhHHHH
Confidence 344444421 11455666666666655543 457899999987653111
Q ss_pred ccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHH-HHHHHhHhh---h-c--CCh
Q 042825 524 KHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYII-HLATWFQKM---H-K--NHD 596 (631)
Q Consensus 524 ~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~-~l~~~~~~~---~-~--~~~ 596 (631)
.....++..|+|||+..+..++.++||||||+++|||++|+.||........... .+..+.... . . .+.
T Consensus 156 ----~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (265)
T cd06605 156 ----AKTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYIVNEPPPRLPSGKFSP 231 (265)
T ss_pred ----hhcccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHHHHhcCCCCCCChhhcCH
Confidence 1126788999999999888999999999999999999999999975422111111 122221111 1 0 245
Q ss_pred hHHHHHHhhcCCChhhHHhHHHHHHH
Q 042825 597 TFQMAIDKTIQLDEENLANVSTVAEL 622 (631)
Q Consensus 597 ~l~~~id~~L~~d~~~r~~~~~vl~l 622 (631)
++.++|.+|+..+|.+|+++.++++.
T Consensus 232 ~~~~li~~~l~~~p~~Rpt~~~ll~~ 257 (265)
T cd06605 232 DFQDFVNLCLIKDPRERPSYKELLEH 257 (265)
T ss_pred HHHHHHHHHcCCCchhCcCHHHHhhC
Confidence 78999999999999999999988753
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity |
| >cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.1e-18 Score=176.41 Aligned_cols=193 Identities=23% Similarity=0.285 Sum_probs=130.1
Q ss_pred eeecCCCceEEEEEEecC----CcEEEEEEEecCCCCHHHHHHHHHHHHHHhc---------------------------
Q 042825 424 NRLGRGGVGTVYKGELKD----GTEVGVKRMELGSVTEQGIAQFESEITVLTK--------------------------- 472 (631)
Q Consensus 424 ~~iG~G~fg~Vyk~~~~~----g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~--------------------------- 472 (631)
+.||+|+||.||+|.+.+ +..||+|++.... .....+.+.+|+.++++
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~ 79 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRIT-DLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYM 79 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCccC-CHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecC
Confidence 468999999999998542 4579999885432 23456778889887765
Q ss_pred --CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCCcc-
Q 042825 473 --GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENGKH- 525 (631)
Q Consensus 473 --gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~~~- 525 (631)
|+|.+++.. ....+.+...+.++.+++.| ..+||+|||+++.+......
T Consensus 80 ~~~~L~~~~~~----~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~~ 155 (262)
T cd05058 80 KHGDLRNFIRS----ETHNPTVKDLIGFGLQVAKGMEYLASKKFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYYS 155 (262)
T ss_pred CCCCHHHHHHh----cCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCCcEEECCccccccccCCccee
Confidence 444444431 12345666677777777765 45789999999865422111
Q ss_pred -ccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcC-CCCCCCCCCChHHHHHHHHHhHhhh--cCChhHHHH
Q 042825 526 -SILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITG-RKVVDATHSDPEYIIHLATWFQKMH--KNHDTFQMA 601 (631)
Q Consensus 526 -~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG-~~P~~~~~~~~~~~~~l~~~~~~~~--~~~~~l~~~ 601 (631)
.......++..|+|||+..+..++.++|||||||++|||++| ..||...... .....+..+..... ..++.+.++
T Consensus 156 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l 234 (262)
T cd05058 156 VHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDSF-DITVYLLQGRRLLQPEYCPDPLYEV 234 (262)
T ss_pred ecccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCCHH-HHHHHHhcCCCCCCCCcCCHHHHHH
Confidence 111234567789999999888899999999999999999995 5556543211 11111111111111 124678999
Q ss_pred HHhhcCCChhhHHhHHHHHHH
Q 042825 602 IDKTIQLDEENLANVSTVAEL 622 (631)
Q Consensus 602 id~~L~~d~~~r~~~~~vl~l 622 (631)
+..++..+|++||++.++++.
T Consensus 235 i~~cl~~~p~~Rp~~~~il~~ 255 (262)
T cd05058 235 MLSCWHPKPEMRPTFSELVSR 255 (262)
T ss_pred HHHHcCCChhhCCCHHHHHHH
Confidence 999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca |
| >cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2 | Back alignment and domain information |
|---|
Probab=99.80 E-value=6.2e-19 Score=182.60 Aligned_cols=201 Identities=23% Similarity=0.281 Sum_probs=138.6
Q ss_pred cCCcccceeecCCCceEEEEEEec-CCc--EEEEEEEecCCCCHHHHHHHHHHHHHHhc---------------------
Q 042825 417 TNNFSEENRLGRGGVGTVYKGELK-DGT--EVGVKRMELGSVTEQGIAQFESEITVLTK--------------------- 472 (631)
Q Consensus 417 t~~f~~~~~iG~G~fg~Vyk~~~~-~g~--~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~--------------------- 472 (631)
.++|+..+.||+|+||.||+|+.+ ++. .+|+|++... ......+++.+|++++.+
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~-~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~ 84 (303)
T cd05088 6 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEY-ASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLY 84 (303)
T ss_pred hhhceeeeeecCCCCceEEEEEEccCCceeeEEEEEeccc-CCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCce
Confidence 357788899999999999999965 454 4577776542 233455678889887654
Q ss_pred --------CChhHHhHhhhh-----------cCCCCCCHHHHHHHHHHhhcC------------------------CCcE
Q 042825 473 --------GTLGRHLFNWEE-----------EGLEPLEWNTRLNIALDVARG------------------------DDMR 509 (631)
Q Consensus 473 --------gsL~~~L~~~~~-----------~~~~~L~~~~~~~I~~~ia~g------------------------~~~k 509 (631)
|+|.++++.... .....+++.....++.+++.+ +.+|
T Consensus 85 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dlkp~Nili~~~~~~k 164 (303)
T cd05088 85 LAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAK 164 (303)
T ss_pred EEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEecCCCcEE
Confidence 566666643210 112357888888888877765 4578
Q ss_pred EEeeccccccCCCCccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChHHHHHHHHHh
Q 042825 510 VADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT-GRKVVDATHSDPEYIIHLATWF 588 (631)
Q Consensus 510 l~DFGla~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~Ellt-G~~P~~~~~~~~~~~~~l~~~~ 588 (631)
|+|||+++.... ........++..|+|||++....++.++|||||||++|||+| |..||......+ ....+....
T Consensus 165 l~dfg~~~~~~~---~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~-~~~~~~~~~ 240 (303)
T cd05088 165 IADFGLSRGQEV---YVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAE-LYEKLPQGY 240 (303)
T ss_pred eCccccCcccch---hhhcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCChHH-HHHHHhcCC
Confidence 999999874321 111112234678999999988889999999999999999998 999997543321 111121110
Q ss_pred H--hhhcCChhHHHHHHhhcCCChhhHHhHHHHHHH
Q 042825 589 Q--KMHKNHDTFQMAIDKTIQLDEENLANVSTVAEL 622 (631)
Q Consensus 589 ~--~~~~~~~~l~~~id~~L~~d~~~r~~~~~vl~l 622 (631)
. .....+.++.+++.+|+..+|.+|+++.+++..
T Consensus 241 ~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 276 (303)
T cd05088 241 RLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVS 276 (303)
T ss_pred cCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 0 111234678999999999999999999987764
|
Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A |
| >KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.2e-19 Score=172.93 Aligned_cols=203 Identities=22% Similarity=0.288 Sum_probs=140.7
Q ss_pred HhhcCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCC------HHHHHHHHHHHHHHhc--------------
Q 042825 414 RNATNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVT------EQGIAQFESEITVLTK-------------- 472 (631)
Q Consensus 414 ~~~t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~------~~~~~~~~~Ei~~l~~-------------- 472 (631)
....+.|...+.+|+|..+.|-++..+ +|.++|+|++...... ..-.+.-.+|++++.+
T Consensus 13 ~~fy~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~y 92 (411)
T KOG0599|consen 13 KGFYAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVY 92 (411)
T ss_pred hhHHhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeec
Confidence 345567888899999999999999865 5899999999753221 1223455678888766
Q ss_pred ---------------CChhHHhHhh-----------hhcCCCCCCHHHHHHHHHHhhcC--------CCcEEEeeccccc
Q 042825 473 ---------------GTLGRHLFNW-----------EEEGLEPLEWNTRLNIALDVARG--------DDMRVADFGLVRL 518 (631)
Q Consensus 473 ---------------gsL~~~L~~~-----------~~~~~~~L~~~~~~~I~~~ia~g--------~~~kl~DFGla~~ 518 (631)
|.|.++|... +++......+.|..+|++...+- .++||+|||+|..
T Consensus 93 es~sF~FlVFdl~prGELFDyLts~VtlSEK~tR~iMrqlfegVeylHa~~IVHRDLKpENILlddn~~i~isDFGFa~~ 172 (411)
T KOG0599|consen 93 ESDAFVFLVFDLMPRGELFDYLTSKVTLSEKETRRIMRQLFEGVEYLHARNIVHRDLKPENILLDDNMNIKISDFGFACQ 172 (411)
T ss_pred cCcchhhhhhhhcccchHHHHhhhheeecHHHHHHHHHHHHHHHHHHHHhhhhhcccChhheeeccccceEEeccceeec
Confidence 7777777531 11112234445555555544433 5678999999998
Q ss_pred cCCCCccccccccccCccccccccccc------CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHH--HHhHh
Q 042825 519 VPENGKHSILTKVAGTFGYLAPEYIVT------GRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLA--TWFQK 590 (631)
Q Consensus 519 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~------~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~--~~~~~ 590 (631)
+.++. .....|||++|+|||.+.- ..|+..+|+||.||+||.|+.|.+||...... .+..+. .....
T Consensus 173 l~~Ge---kLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQm--lMLR~ImeGkyqF 247 (411)
T KOG0599|consen 173 LEPGE---KLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQM--LMLRMIMEGKYQF 247 (411)
T ss_pred cCCch---hHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHHH--HHHHHHHhccccc
Confidence 86433 3567899999999999853 34888999999999999999999999743111 111111 11110
Q ss_pred h----hcCChhHHHHHHhhcCCChhhHHhHHHHHH
Q 042825 591 M----HKNHDTFQMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 591 ~----~~~~~~l~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
. -..+.+.+++|.++|++||..|.++++++.
T Consensus 248 ~speWadis~~~KdLIsrlLqVdp~~Ritake~La 282 (411)
T KOG0599|consen 248 RSPEWADISATVKDLISRLLQVDPTKRITAKEALA 282 (411)
T ss_pred CCcchhhccccHHHHHHHHHeeCchhcccHHHHhc
Confidence 0 122467899999999999999999988764
|
|
| >cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4 | Back alignment and domain information |
|---|
Probab=99.80 E-value=8.8e-19 Score=181.42 Aligned_cols=201 Identities=23% Similarity=0.335 Sum_probs=139.5
Q ss_pred CCcccceeecCCCceEEEEEEec-CCc----EEEEEEEecCCCCHHHHHHHHHHHHHHhc--------------------
Q 042825 418 NNFSEENRLGRGGVGTVYKGELK-DGT----EVGVKRMELGSVTEQGIAQFESEITVLTK-------------------- 472 (631)
Q Consensus 418 ~~f~~~~~iG~G~fg~Vyk~~~~-~g~----~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~-------------------- 472 (631)
++|+..+.||+|+||.||+|++. +|. .||+|.+.... ......++.+|+.++.+
T Consensus 7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~ 85 (303)
T cd05110 7 TELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETT-GPKANVEFMDEALIMASMDHPHLVRLLGVCLSPTIQL 85 (303)
T ss_pred hhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccC-CHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCCCcee
Confidence 46777899999999999999864 344 57888886543 23344568888887765
Q ss_pred -------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCC
Q 042825 473 -------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPE 521 (631)
Q Consensus 473 -------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~ 521 (631)
|++.+++. .....+.+.....++.+++.| +.+||+|||+++....
T Consensus 86 v~e~~~~g~l~~~~~----~~~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dikp~Nill~~~~~~kL~Dfg~~~~~~~ 161 (303)
T cd05110 86 VTQLMPHGCLLDYVH----EHKDNIGSQLLLNWCVQIAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEG 161 (303)
T ss_pred eehhcCCCCHHHHHH----hcccCCCHHHHHHHHHHHHHHHHHHhhcCeeccccccceeeecCCCceEEccccccccccC
Confidence 44444442 222356777778888777765 4578999999987642
Q ss_pred CCccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChHHHHHHHHHhHhh---hcCChh
Q 042825 522 NGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT-GRKVVDATHSDPEYIIHLATWFQKM---HKNHDT 597 (631)
Q Consensus 522 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~Ellt-G~~P~~~~~~~~~~~~~l~~~~~~~---~~~~~~ 597 (631)
...........++..|+|||++.+..++.++|||||||++|||++ |+.||.+.... ....+....... .....+
T Consensus 162 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 239 (303)
T cd05110 162 DEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTR--EIPDLLEKGERLPQPPICTID 239 (303)
T ss_pred cccccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHHHCCCCCCCCCCCCHH
Confidence 222112233456789999999988889999999999999999998 99999754321 111111111111 112357
Q ss_pred HHHHHHhhcCCChhhHHhHHHHHHHHHh
Q 042825 598 FQMAIDKTIQLDEENLANVSTVAELGDH 625 (631)
Q Consensus 598 l~~~id~~L~~d~~~r~~~~~vl~lal~ 625 (631)
+.+++..++..+|++|+++.++++....
T Consensus 240 ~~~li~~c~~~~p~~Rp~~~~l~~~l~~ 267 (303)
T cd05110 240 VYMVMVKCWMIDADSRPKFKELAAEFSR 267 (303)
T ss_pred HHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence 8899999999999999999998876443
|
Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin |
| >KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.80 E-value=3e-19 Score=178.14 Aligned_cols=202 Identities=22% Similarity=0.287 Sum_probs=134.4
Q ss_pred cCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhcCC-------hhHH----------
Q 042825 417 TNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTKGT-------LGRH---------- 478 (631)
Q Consensus 417 t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~gs-------L~~~---------- 478 (631)
...|+..++||+|+||+||+|+.+ +|+.||+|+++.....+..-....+|+-++++-. |.+.
T Consensus 10 ~~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~ 89 (323)
T KOG0594|consen 10 MFDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGI 89 (323)
T ss_pred HHHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeeccccccc
Confidence 345667788999999999999955 6899999999876432222234567777776500 1111
Q ss_pred -------------hHhhhhcCC---CCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccc
Q 042825 479 -------------LFNWEEEGL---EPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRL 518 (631)
Q Consensus 479 -------------L~~~~~~~~---~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~ 518 (631)
+..+..... ..++-.....+..|+.+| +.+||+|||+|+.
T Consensus 90 ~~l~lvfe~~d~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~~IlHRDLKPQNlLi~~~G~lKlaDFGlAra 169 (323)
T KOG0594|consen 90 GKLYLVFEFLDRDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSHGILHRDLKPQNLLISSSGVLKLADFGLARA 169 (323)
T ss_pred ceEEEEEEeecccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCcceEEECCCCcEeeeccchHHH
Confidence 111111111 234444444555555544 6789999999997
Q ss_pred cCCCCccccccccccCcccccccccccC-CCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHH---------HHh
Q 042825 519 VPENGKHSILTKVAGTFGYLAPEYIVTG-RITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLA---------TWF 588 (631)
Q Consensus 519 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~---------~~~ 588 (631)
..-+. ...+..++|..|.|||++.+. .|+..+||||+||++.||++++.-|.+..+.+ ....+. .|.
T Consensus 170 ~~ip~--~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~-ql~~If~~lGtP~e~~Wp 246 (323)
T KOG0594|consen 170 FSIPM--RTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEID-QLFRIFRLLGTPNEKDWP 246 (323)
T ss_pred hcCCc--ccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHH-HHHHHHHHcCCCCccCCC
Confidence 64222 235677899999999999887 69999999999999999999999998765422 222221 121
Q ss_pred Hh----------------------hhcCChhHHHHHHhhcCCChhhHHhHHHHHH
Q 042825 589 QK----------------------MHKNHDTFQMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 589 ~~----------------------~~~~~~~l~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
.. ......+..|++.++|+.+|..|.++..++.
T Consensus 247 ~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~ 301 (323)
T KOG0594|consen 247 GVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALT 301 (323)
T ss_pred CccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhc
Confidence 00 0001136789999999999999999887664
|
|
| >cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.4e-18 Score=182.58 Aligned_cols=206 Identities=20% Similarity=0.294 Sum_probs=138.0
Q ss_pred hcCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhcCC---hhHHh------------
Q 042825 416 ATNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTKGT---LGRHL------------ 479 (631)
Q Consensus 416 ~t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~gs---L~~~L------------ 479 (631)
.+++|...+.||+|+||.||+|+.. +|+.||||++.... ......++.+|+.++.+-. +-...
T Consensus 3 ~~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 81 (336)
T cd07849 3 VGPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFE-HQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFN 81 (336)
T ss_pred cccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccc-cchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccc
Confidence 3578999999999999999999865 68999999986432 2234466788888877611 10000
Q ss_pred -----Hhhhhc------CCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCCc
Q 042825 480 -----FNWEEE------GLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENGK 524 (631)
Q Consensus 480 -----~~~~~~------~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~~ 524 (631)
.++... ....+.+.....++.+++.| +.+||+|||+++.......
T Consensus 82 ~~~lv~e~~~~~l~~~~~~~~l~~~~~~~i~~ql~~aL~~LH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~ 161 (336)
T cd07849 82 DVYIVQELMETDLYKLIKTQHLSNDHIQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTNCDLKICDFGLARIADPEHD 161 (336)
T ss_pred eEEEEehhcccCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCCCEEECcccceeecccccc
Confidence 000000 11346777777777777765 4678999999987542211
Q ss_pred c-ccccccccCccccccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCh--------------HHHHHH----
Q 042825 525 H-SILTKVAGTFGYLAPEYIVT-GRITAKVDVYSFGMILMDLITGRKVVDATHSDP--------------EYIIHL---- 584 (631)
Q Consensus 525 ~-~~~~~~~gt~~Y~aPE~~~~-~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~--------------~~~~~l---- 584 (631)
. .......|+..|+|||.+.+ ..++.++||||+||++|||++|+.||.+..... +....+
T Consensus 162 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (336)
T cd07849 162 HTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGVLGTPSQEDLNCIISLR 241 (336)
T ss_pred ccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhchh
Confidence 1 12234578999999998754 468999999999999999999999997532110 000000
Q ss_pred -HHHhH------------hhhcCChhHHHHHHhhcCCChhhHHhHHHHHHH
Q 042825 585 -ATWFQ------------KMHKNHDTFQMAIDKTIQLDEENLANVSTVAEL 622 (631)
Q Consensus 585 -~~~~~------------~~~~~~~~l~~~id~~L~~d~~~r~~~~~vl~l 622 (631)
..+.. .....+.++.+++.+|+..+|++|+++.++++.
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~h 292 (336)
T cd07849 242 ARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAH 292 (336)
T ss_pred hhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 00000 011234568899999999999999999988763
|
Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase |
| >cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.2e-18 Score=176.47 Aligned_cols=196 Identities=21% Similarity=0.368 Sum_probs=138.7
Q ss_pred cccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCH-------HHHHHHHHHHHHHhc-------------------
Q 042825 420 FSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTE-------QGIAQFESEITVLTK------------------- 472 (631)
Q Consensus 420 f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~-------~~~~~~~~Ei~~l~~------------------- 472 (631)
|.....||+|+||.||+|... +++.||+|.+....... ...+.+.+|++++.+
T Consensus 2 ~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 81 (267)
T cd06628 2 WIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADHL 81 (267)
T ss_pred ccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCcc
Confidence 566789999999999999865 58899999886543221 123568888888765
Q ss_pred ---------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeecccccc
Q 042825 473 ---------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLV 519 (631)
Q Consensus 473 ---------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~ 519 (631)
++|.+++.. ...+++.....++.+++.+ +.++|+|||+++..
T Consensus 82 ~lv~e~~~~~~L~~~l~~-----~~~l~~~~~~~~~~~l~~~l~~lH~~~ivH~di~p~nil~~~~~~~~l~dfg~~~~~ 156 (267)
T cd06628 82 NIFLEYVPGGSVAALLNN-----YGAFEETLVRNFVRQILKGLNYLHNRGIIHRDIKGANILVDNKGGIKISDFGISKKL 156 (267)
T ss_pred EEEEEecCCCCHHHHHHh-----ccCccHHHHHHHHHHHHHHHHHHHhcCcccccCCHHHEEEcCCCCEEecccCCCccc
Confidence 344444422 2346777777777777654 45789999999876
Q ss_pred CCCCcc----ccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHhHhh--hc
Q 042825 520 PENGKH----SILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQKM--HK 593 (631)
Q Consensus 520 ~~~~~~----~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~~~~--~~ 593 (631)
...... .......|+..|+|||.+.+..++.++||||+||++|||++|+.||....... ....+..+.... ..
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~ 235 (267)
T cd06628 157 EANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQ-AIFKIGENASPEIPSN 235 (267)
T ss_pred ccccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccHHH-HHHHHhccCCCcCCcc
Confidence 421111 11123468899999999988889999999999999999999999998543221 111122221111 12
Q ss_pred CChhHHHHHHhhcCCChhhHHhHHHHHH
Q 042825 594 NHDTFQMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 594 ~~~~l~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
.+..+.+++.+++..+|.+|+++.++++
T Consensus 236 ~~~~~~~li~~~l~~~p~~Rp~~~~il~ 263 (267)
T cd06628 236 ISSEAIDFLEKTFEIDHNKRPTAAELLK 263 (267)
T ss_pred cCHHHHHHHHHHccCCchhCcCHHHHhh
Confidence 3467899999999999999999998875
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate |
| >cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=99.79 E-value=6.8e-19 Score=180.38 Aligned_cols=194 Identities=22% Similarity=0.350 Sum_probs=138.4
Q ss_pred CCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc------------------------
Q 042825 418 NNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK------------------------ 472 (631)
Q Consensus 418 ~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~------------------------ 472 (631)
++|+..+.||+|+||+||+++.. +|+.||+|++.... .....+++.+|++++..
T Consensus 5 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 83 (284)
T cd06620 5 EDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGA-KSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCME 83 (284)
T ss_pred HHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecC-cchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEEe
Confidence 46778899999999999999865 58899999887543 23346788999988865
Q ss_pred ----CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC-------------------------CCcEEEeeccccccCCCC
Q 042825 473 ----GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG-------------------------DDMRVADFGLVRLVPENG 523 (631)
Q Consensus 473 ----gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g-------------------------~~~kl~DFGla~~~~~~~ 523 (631)
++|.+++.. ...+.+.....++.+++.+ ..++|+|||+++.....
T Consensus 84 ~~~~~~L~~~~~~-----~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~- 157 (284)
T cd06620 84 FMDCGSLDRIYKK-----GGPIPVEILGKIAVAVVEGLTYLYNVHRIMHRDIKPSNILVNSRGQIKLCDFGVSGELINS- 157 (284)
T ss_pred cCCCCCHHHHHHh-----ccCCCHHHHHHHHHHHHHHHHHHHHhcCeeccCCCHHHEEECCCCcEEEccCCcccchhhh-
Confidence 444444421 2346676666666555443 35789999998755211
Q ss_pred ccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChH---HHHHHHHHhHhhh--------
Q 042825 524 KHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPE---YIIHLATWFQKMH-------- 592 (631)
Q Consensus 524 ~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~---~~~~l~~~~~~~~-------- 592 (631)
......|+..|+|||++.+..++.++|||||||++|||+||+.||+....... ....+..+.....
T Consensus 158 ---~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (284)
T cd06620 158 ---IADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQEPPPRLP 234 (284)
T ss_pred ---ccCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhhccCCCCC
Confidence 12345789999999999888899999999999999999999999985433100 0011111221111
Q ss_pred --cCChhHHHHHHhhcCCChhhHHhHHHHHH
Q 042825 593 --KNHDTFQMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 593 --~~~~~l~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
....++.+++.+|+..||.+|+++.++++
T Consensus 235 ~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~ 265 (284)
T cd06620 235 SSDFPEDLRDFVDACLLKDPTERPTPQQLCA 265 (284)
T ss_pred chhcCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 12346899999999999999999999876
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase | Back alignment and domain information |
|---|
Probab=99.79 E-value=7.9e-19 Score=180.02 Aligned_cols=197 Identities=21% Similarity=0.344 Sum_probs=145.3
Q ss_pred hhcCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc---------------------
Q 042825 415 NATNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK--------------------- 472 (631)
Q Consensus 415 ~~t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~--------------------- 472 (631)
..++.|+..+.||+|+||.||+|..+ ++..||+|++..... ..+.+.+|++++.+
T Consensus 16 ~~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~---~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l 92 (286)
T cd06614 16 DPRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ---NKELIINEILIMKDCKHPNIVDYYDSYLVGDELWV 92 (286)
T ss_pred CccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch---hHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEE
Confidence 45677888899999999999999977 588999999976432 45678889887765
Q ss_pred -------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCC
Q 042825 473 -------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPE 521 (631)
Q Consensus 473 -------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~ 521 (631)
++|.+++.. ....+++..+..++.+++.+ +.++|+|||++.....
T Consensus 93 v~e~~~~~~L~~~l~~----~~~~l~~~~~~~i~~~i~~~L~~lH~~gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~ 168 (286)
T cd06614 93 VMEYMDGGSLTDIITQ----NFVRMNEPQIAYVCREVLQGLEYLHSQNVIHRDIKSDNILLSKDGSVKLADFGFAAQLTK 168 (286)
T ss_pred EEeccCCCcHHHHHHH----hccCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCChhhEEEcCCCCEEECccchhhhhcc
Confidence 566666643 11478999998888888765 4578999999876532
Q ss_pred CCccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHH-HhHh---hhcCChh
Q 042825 522 NGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLAT-WFQK---MHKNHDT 597 (631)
Q Consensus 522 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~-~~~~---~~~~~~~ 597 (631)
.. .......++..|++||++.+..++.++|||||||++|||++|+.||....... ....+.. .... ......+
T Consensus 169 ~~--~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 245 (286)
T cd06614 169 EK--SKRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLR-ALFLITTKGIPPLKNPEKWSPE 245 (286)
T ss_pred ch--hhhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHhcCCCCCcchhhCCHH
Confidence 11 12234468889999999988889999999999999999999999997543221 1111111 1000 0002357
Q ss_pred HHHHHHhhcCCChhhHHhHHHHHH
Q 042825 598 FQMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 598 l~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
+.+++..|+..+|..|+++.++++
T Consensus 246 l~~li~~~l~~~p~~Rpt~~~il~ 269 (286)
T cd06614 246 FKDFLNKCLVKDPEKRPSAEELLQ 269 (286)
T ss_pred HHHHHHHHhccChhhCcCHHHHhh
Confidence 899999999999999999998864
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou |
| >cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.1e-18 Score=176.15 Aligned_cols=193 Identities=18% Similarity=0.269 Sum_probs=136.4
Q ss_pred eecCCCceEEEEEEec---CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc---------------------------CC
Q 042825 425 RLGRGGVGTVYKGELK---DGTEVGVKRMELGSVTEQGIAQFESEITVLTK---------------------------GT 474 (631)
Q Consensus 425 ~iG~G~fg~Vyk~~~~---~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~---------------------------gs 474 (631)
.||+|+||.||+|.+. .+..||+|++.... .....++|.+|+.++.+ |+
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~-~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~lv~e~~~~~~ 80 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNEN-EKSVRDEMMREAEIMHQLDNPYIVRMIGVCEAEALMLVMEMASGGP 80 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEccccc-ChHHHHHHHHHHHHHHhcCCCCeEEEEEEEcCCCeEEEEEeCCCCC
Confidence 3899999999999764 35679999987543 33445678899988875 55
Q ss_pred hhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCCcc-cccc
Q 042825 475 LGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENGKH-SILT 529 (631)
Q Consensus 475 L~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~~~-~~~~ 529 (631)
|.+++. .....+++.....++.+++.+ ..+||+|||+++........ ....
T Consensus 81 L~~~l~----~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~ 156 (257)
T cd05115 81 LNKFLS----GKKDEITVSNVVELMHQVSMGMKYLEGKNFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYKARS 156 (257)
T ss_pred HHHHHH----hCCCCCCHHHHHHHHHHHHHHHHHHHhcCeeecccchheEEEcCCCcEEeccCCccccccCCccceeccC
Confidence 555553 223467888888888888776 34689999999865422211 1112
Q ss_pred ccccCcccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChHHHHHHHHHhHhh--hcCChhHHHHHHhhc
Q 042825 530 KVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT-GRKVVDATHSDPEYIIHLATWFQKM--HKNHDTFQMAIDKTI 606 (631)
Q Consensus 530 ~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~Ellt-G~~P~~~~~~~~~~~~~l~~~~~~~--~~~~~~l~~~id~~L 606 (631)
...++..|+|||+.....++.++|||||||++||+++ |+.||....... ....+....+.. ....+++.+++.+|+
T Consensus 157 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~li~~c~ 235 (257)
T cd05115 157 AGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPE-VMSFIEQGKRLDCPAECPPEMYALMKDCW 235 (257)
T ss_pred CCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHHH-HHHHHHCCCCCCCCCCCCHHHHHHHHHHc
Confidence 2334678999999988889999999999999999996 999997653221 111111111111 112468899999999
Q ss_pred CCChhhHHhHHHHHHHH
Q 042825 607 QLDEENLANVSTVAELG 623 (631)
Q Consensus 607 ~~d~~~r~~~~~vl~la 623 (631)
..+|++|+++.++.+..
T Consensus 236 ~~~~~~Rp~~~~i~~~l 252 (257)
T cd05115 236 IYKWEDRPNFAKVEERM 252 (257)
T ss_pred CCChhhCcCHHHHHHHH
Confidence 99999999999887653
|
Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho |
| >cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.1e-18 Score=180.72 Aligned_cols=199 Identities=19% Similarity=0.225 Sum_probs=137.8
Q ss_pred CCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCC-HHHHHHHHHHHHHHhc-----------------------
Q 042825 418 NNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVT-EQGIAQFESEITVLTK----------------------- 472 (631)
Q Consensus 418 ~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~-~~~~~~~~~Ei~~l~~----------------------- 472 (631)
++|+..+.||+|+||.||+++.. .++.||+|.+...... ......+.+|++++..
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (305)
T cd05609 1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVM 80 (305)
T ss_pred CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEE
Confidence 46888999999999999999976 4889999998765321 2344677888887765
Q ss_pred -----CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCC
Q 042825 473 -----GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENG 523 (631)
Q Consensus 473 -----gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~ 523 (631)
++|.+++.. ...+.+.....++.+++.| +.++++|||+++......
T Consensus 81 e~~~g~~L~~~l~~-----~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~~ 155 (305)
T cd05609 81 EYVEGGDCATLLKN-----IGALPVDMARMYFAETVLALEYLHNYGIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSL 155 (305)
T ss_pred ecCCCCcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHEEECCCCCEEEeeCCCccccCcCc
Confidence 455555532 2346777777777666654 467899999987421000
Q ss_pred -------------ccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHH---
Q 042825 524 -------------KHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATW--- 587 (631)
Q Consensus 524 -------------~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~--- 587 (631)
.........|+..|+|||++....++.++|||||||++|||++|+.||.+....+ ........
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~~-~~~~~~~~~~~ 234 (305)
T cd05609 156 TTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEE-LFGQVISDDIE 234 (305)
T ss_pred cccccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHhcccC
Confidence 0001123467889999999988889999999999999999999999997543221 11111111
Q ss_pred -hHhhhcCChhHHHHHHhhcCCChhhHHh---HHHHHHH
Q 042825 588 -FQKMHKNHDTFQMAIDKTIQLDEENLAN---VSTVAEL 622 (631)
Q Consensus 588 -~~~~~~~~~~l~~~id~~L~~d~~~r~~---~~~vl~l 622 (631)
.......+.++.+++.+|+..+|++|++ +.++++-
T Consensus 235 ~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~ 273 (305)
T cd05609 235 WPEGDEALPADAQDLISRLLRQNPLERLGTGGAFEVKQH 273 (305)
T ss_pred CCCccccCCHHHHHHHHHHhccChhhccCccCHHHHHhC
Confidence 1111122467899999999999999997 4555544
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a |
| >cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.3e-18 Score=174.89 Aligned_cols=194 Identities=22% Similarity=0.333 Sum_probs=143.2
Q ss_pred CcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc-------------------------
Q 042825 419 NFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK------------------------- 472 (631)
Q Consensus 419 ~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~------------------------- 472 (631)
+|+..+.||+|+||.||+++.. +++.+|+|++...........++.+|++++++
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 80 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVMEY 80 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEehh
Confidence 4778899999999999999855 68899999997655455556778888887765
Q ss_pred ---CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCCcc
Q 042825 473 ---GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENGKH 525 (631)
Q Consensus 473 ---gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~~~ 525 (631)
++|.+++.... .....+++.....++.+++.+ ..+|++|||+++.....
T Consensus 81 ~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~~~l~~al~~lh~~~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~--- 156 (256)
T cd08530 81 APFGDLSKAISKRK-KKRKLIPEQEIWRIFIQLLRGLQALHEQKILHRDLKSANILLVANDLVKIGDLGISKVLKKN--- 156 (256)
T ss_pred cCCCCHHHHHHHHH-hhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEEecCCcEEEeeccchhhhccC---
Confidence 34444443311 123457888888888777764 45789999999877432
Q ss_pred ccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHhHhh-----hcCChhHHH
Q 042825 526 SILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQKM-----HKNHDTFQM 600 (631)
Q Consensus 526 ~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~~~~-----~~~~~~l~~ 600 (631)
......++..|++||...+..++.++|+||+|+++|||++|+.||......+ ... ...... .....++.+
T Consensus 157 -~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~--~~~--~~~~~~~~~~~~~~~~~~~~ 231 (256)
T cd08530 157 -MAKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQD--LRY--KVQRGKYPPIPPIYSQDLQN 231 (256)
T ss_pred -CcccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH--HHH--HHhcCCCCCCchhhCHHHHH
Confidence 2223568899999999988889999999999999999999999997653221 111 111111 112467899
Q ss_pred HHHhhcCCChhhHHhHHHHHH
Q 042825 601 AIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 601 ~id~~L~~d~~~r~~~~~vl~ 621 (631)
++.+++..+|++|+++.++++
T Consensus 232 li~~~l~~~p~~Rp~~~~~l~ 252 (256)
T cd08530 232 FIRSMLQVKPKLRPNCDKILA 252 (256)
T ss_pred HHHHHcCCCcccCCCHHHHhc
Confidence 999999999999999998875
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an |
| >cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.79 E-value=6.8e-19 Score=179.87 Aligned_cols=194 Identities=20% Similarity=0.294 Sum_probs=141.3
Q ss_pred cCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc-----------------------
Q 042825 417 TNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK----------------------- 472 (631)
Q Consensus 417 t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~----------------------- 472 (631)
.++|+..+.||+|+||.||+|+.. ++..+|+|.+... .....+.|.+|++++.+
T Consensus 4 ~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 81 (280)
T cd06611 4 NDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIE--SEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILI 81 (280)
T ss_pred hhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeC--CHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEe
Confidence 456888899999999999999975 5889999998754 34456778899988876
Q ss_pred -----CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCC
Q 042825 473 -----GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENG 523 (631)
Q Consensus 473 -----gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~ 523 (631)
++|.+++.. ....+++.....++.+++.+ +.++|+|||++......
T Consensus 82 e~~~~~~L~~~~~~----~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~- 156 (280)
T cd06611 82 EFCDGGALDSIMLE----LERGLTEPQIRYVCRQMLEALNFLHSHKVIHRDLKAGNILLTLDGDVKLADFGVSAKNKST- 156 (280)
T ss_pred eccCCCcHHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEECCCCCEEEccCccchhhccc-
Confidence 445444432 22457788888888777765 45789999998765321
Q ss_pred ccccccccccCcccccccccc-----cCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHhHh---h----
Q 042825 524 KHSILTKVAGTFGYLAPEYIV-----TGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQK---M---- 591 (631)
Q Consensus 524 ~~~~~~~~~gt~~Y~aPE~~~-----~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~~~---~---- 591 (631)
........|+..|+|||++. ...++.++|||||||++|||++|+.||...... ..+..+... .
T Consensus 157 -~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~----~~~~~~~~~~~~~~~~~ 231 (280)
T cd06611 157 -LQKRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPM----RVLLKILKSEPPTLDQP 231 (280)
T ss_pred -ccccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHH----HHHHHHhcCCCCCcCCc
Confidence 11223456899999999975 344788999999999999999999999754322 112222211 0
Q ss_pred hcCChhHHHHHHhhcCCChhhHHhHHHHHHH
Q 042825 592 HKNHDTFQMAIDKTIQLDEENLANVSTVAEL 622 (631)
Q Consensus 592 ~~~~~~l~~~id~~L~~d~~~r~~~~~vl~l 622 (631)
...+.++.+++.+++..+|.+|+++.++++-
T Consensus 232 ~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 262 (280)
T cd06611 232 SKWSSSFNDFLKSCLVKDPDDRPTAAELLKH 262 (280)
T ss_pred ccCCHHHHHHHHHHhccChhhCcCHHHHhcC
Confidence 1123578999999999999999999988753
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti |
| >cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5 | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.7e-18 Score=181.91 Aligned_cols=201 Identities=18% Similarity=0.286 Sum_probs=140.2
Q ss_pred cCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhcC----------------------
Q 042825 417 TNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTKG---------------------- 473 (631)
Q Consensus 417 t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~g---------------------- 473 (631)
.++|+..+.||+|+||.||+|... +|+.||+|++..........+.+.+|+.++.+-
T Consensus 4 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 83 (334)
T cd07855 4 GSRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDV 83 (334)
T ss_pred hhceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceE
Confidence 367888999999999999999865 599999999876433333456677888888651
Q ss_pred ---------ChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccC
Q 042825 474 ---------TLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVP 520 (631)
Q Consensus 474 ---------sL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~ 520 (631)
++.+++ .....+++.....++.+++.| +.+||+|||+++...
T Consensus 84 ~lv~e~~~~~l~~~~-----~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~~~kl~dfg~~~~~~ 158 (334)
T cd07855 84 YVVMDLMESDLHHII-----HSDQPLTEEHIRYFLYQLLRGLKYIHSANVIHRDLKPSNLLVNEDCELRIGDFGMARGLS 158 (334)
T ss_pred EEEEehhhhhHHHHh-----ccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEecccccceeec
Confidence 111111 112347888888888887775 457899999998653
Q ss_pred CCCcc--ccccccccCccccccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHH--------------
Q 042825 521 ENGKH--SILTKVAGTFGYLAPEYIVT-GRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIH-------------- 583 (631)
Q Consensus 521 ~~~~~--~~~~~~~gt~~Y~aPE~~~~-~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~-------------- 583 (631)
..... .......|+..|+|||++.. ..++.++|||||||++|||++|+.||.+..........
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~~~~~~~ 238 (334)
T cd07855 159 SSPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSEEVLNR 238 (334)
T ss_pred ccCcCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCChhHhhhh
Confidence 22111 11234578999999998765 45899999999999999999999999764321100000
Q ss_pred -----HHHHh------------HhhhcCChhHHHHHHhhcCCChhhHHhHHHHHHH
Q 042825 584 -----LATWF------------QKMHKNHDTFQMAIDKTIQLDEENLANVSTVAEL 622 (631)
Q Consensus 584 -----l~~~~------------~~~~~~~~~l~~~id~~L~~d~~~r~~~~~vl~l 622 (631)
+.... ......++++.++|..+++.+|.+|+++.+++..
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~ 294 (334)
T cd07855 239 IGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQH 294 (334)
T ss_pred hchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 00000 0001234678999999999999999999987753
|
Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the |
| >KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.4e-19 Score=184.72 Aligned_cols=212 Identities=19% Similarity=0.281 Sum_probs=144.4
Q ss_pred HhhcCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCH------------HHHHHHHHHHHHHhcCChh----
Q 042825 414 RNATNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTE------------QGIAQFESEITVLTKGTLG---- 476 (631)
Q Consensus 414 ~~~t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~------------~~~~~~~~Ei~~l~~gsL~---- 476 (631)
.+..+.|...+.||+|.||.|-+|+.. +++.||||++.+..... ...++..+||.+|++-...
T Consensus 93 ~k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~ 172 (576)
T KOG0585|consen 93 RKQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVK 172 (576)
T ss_pred ceehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeE
Confidence 345678999999999999999999955 69999999996533211 1235789999999982211
Q ss_pred --HHh-----------HhhhhcC-------CCC-CCHHHHHHHHHHhhcC------------------------CCcEEE
Q 042825 477 --RHL-----------FNWEEEG-------LEP-LEWNTRLNIALDVARG------------------------DDMRVA 511 (631)
Q Consensus 477 --~~L-----------~~~~~~~-------~~~-L~~~~~~~I~~~ia~g------------------------~~~kl~ 511 (631)
+.| .+|...+ ..+ |...+..++..++..| +.+||+
T Consensus 173 LiEvLDDP~s~~~YlVley~s~G~v~w~p~d~~els~~~Ar~ylrDvv~GLEYLH~QgiiHRDIKPsNLLl~~~g~VKIs 252 (576)
T KOG0585|consen 173 LIEVLDDPESDKLYLVLEYCSKGEVKWCPPDKPELSEQQARKYLRDVVLGLEYLHYQGIIHRDIKPSNLLLSSDGTVKIS 252 (576)
T ss_pred EEEeecCcccCceEEEEEeccCCccccCCCCcccccHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEEcCCCcEEee
Confidence 111 1111111 122 6666666677666665 678999
Q ss_pred eeccccccCCC---CccccccccccCcccccccccccCC----CCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHH
Q 042825 512 DFGLVRLVPEN---GKHSILTKVAGTFGYLAPEYIVTGR----ITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHL 584 (631)
Q Consensus 512 DFGla~~~~~~---~~~~~~~~~~gt~~Y~aPE~~~~~~----~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l 584 (631)
|||.+-..... +........+||+.|||||...++. .+.+.||||+||+||.|+.|+.||.+...-+ ....+
T Consensus 253 DFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~~~~-l~~KI 331 (576)
T KOG0585|consen 253 DFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDFELE-LFDKI 331 (576)
T ss_pred ccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccchHHH-HHHHH
Confidence 99999765322 1122344578999999999988743 3568999999999999999999998654322 11122
Q ss_pred HHHhHhh---hcCChhHHHHHHhhcCCChhhHHhHHHHHHHHHhh
Q 042825 585 ATWFQKM---HKNHDTFQMAIDKTIQLDEENLANVSTVAELGDHC 626 (631)
Q Consensus 585 ~~~~~~~---~~~~~~l~~~id~~L~~d~~~r~~~~~vl~lal~C 626 (631)
+...-.. ....+.++|+|.++|.+||+.|.++.++...-+.|
T Consensus 332 vn~pL~fP~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpwvt 376 (576)
T KOG0585|consen 332 VNDPLEFPENPEINEDLKDLIKRLLEKDPEQRITLPDIKLHPWVT 376 (576)
T ss_pred hcCcccCCCcccccHHHHHHHHHHhhcChhheeehhhheecceec
Confidence 2211111 11246889999999999999999988765544443
|
|
| >cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.6e-18 Score=175.13 Aligned_cols=195 Identities=20% Similarity=0.311 Sum_probs=143.4
Q ss_pred CCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc------------------------
Q 042825 418 NNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK------------------------ 472 (631)
Q Consensus 418 ~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~------------------------ 472 (631)
++|+..+.||+|++|.||+++.. +++.||||++...... .....+.+|++.+.+
T Consensus 1 ~~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 79 (264)
T cd06623 1 SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDE-EFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLE 79 (264)
T ss_pred CcceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcch-HHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEE
Confidence 46888899999999999999977 4999999998765432 456778899887765
Q ss_pred ----CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC-------------------------CCcEEEeeccccccCCCC
Q 042825 473 ----GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG-------------------------DDMRVADFGLVRLVPENG 523 (631)
Q Consensus 473 ----gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g-------------------------~~~kl~DFGla~~~~~~~ 523 (631)
++|.+++.. ...++......++.+++++ +.++|+|||+++......
T Consensus 80 ~~~~~~L~~~l~~-----~~~l~~~~~~~~~~~l~~~l~~lh~~~~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~ 154 (264)
T cd06623 80 YMDGGSLADLLKK-----VGKIPEPVLAYIARQILKGLDYLHTKRHIIHRDIKPSNLLINSKGEVKIADFGISKVLENTL 154 (264)
T ss_pred ecCCCcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHhccCCCccCCCCHHHEEECCCCCEEEccCccceecccCC
Confidence 555555532 1456777777777666654 456899999998764222
Q ss_pred ccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHhHhh----h--c-CCh
Q 042825 524 KHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQKM----H--K-NHD 596 (631)
Q Consensus 524 ~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~~~~----~--~-~~~ 596 (631)
.......++..|+|||......++.++||||||+++|||+||+.||....... ...+..+.... . . .+.
T Consensus 155 --~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 230 (264)
T cd06623 155 --DQCNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPS--FFELMQAICDGPPPSLPAEEFSP 230 (264)
T ss_pred --CcccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccccC--HHHHHHHHhcCCCCCCCcccCCH
Confidence 12234568899999999988889999999999999999999999997654211 11222222111 0 1 245
Q ss_pred hHHHHHHhhcCCChhhHHhHHHHHHH
Q 042825 597 TFQMAIDKTIQLDEENLANVSTVAEL 622 (631)
Q Consensus 597 ~l~~~id~~L~~d~~~r~~~~~vl~l 622 (631)
.+.+++..|+..+|.+|+++.++++.
T Consensus 231 ~l~~li~~~l~~~p~~R~~~~~ll~~ 256 (264)
T cd06623 231 EFRDFISACLQKDPKKRPSAAELLQH 256 (264)
T ss_pred HHHHHHHHHccCChhhCCCHHHHHhC
Confidence 79999999999999999999988763
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of |
| >cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.3e-18 Score=175.28 Aligned_cols=192 Identities=23% Similarity=0.363 Sum_probs=140.4
Q ss_pred CCcccceeecCCCceEEEEEEecCCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc-------------------------
Q 042825 418 NNFSEENRLGRGGVGTVYKGELKDGTEVGVKRMELGSVTEQGIAQFESEITVLTK------------------------- 472 (631)
Q Consensus 418 ~~f~~~~~iG~G~fg~Vyk~~~~~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~------------------------- 472 (631)
++|+..+.||+|+||.||+|... |+.||||.+..... ..+++.+|+.++.+
T Consensus 6 ~~~~~~~~ig~g~~g~v~~~~~~-~~~v~iK~~~~~~~---~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 81 (256)
T cd05039 6 KELKLGATIGKGEFGDVMLGDYR-GQKVAVKCLKDDST---AAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTEY 81 (256)
T ss_pred hhccceeeeecCCCceEEEEEec-CcEEEEEEeccchh---HHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEEEe
Confidence 46778899999999999999875 78999999976432 45778899888866
Q ss_pred ---CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCCcc
Q 042825 473 ---GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENGKH 525 (631)
Q Consensus 473 ---gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~~~ 525 (631)
++|.+++.. .....+.|.....++.+++.+ +.+||+|||.++......
T Consensus 82 ~~~~~L~~~~~~---~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~-- 156 (256)
T cd05039 82 MAKGSLVDYLRS---RGRAVITLAQQLGFALDVCEGMEYLEEKNFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQ-- 156 (256)
T ss_pred cCCCcHHHHHHh---cCCCCCCHHHHHHHHHHHHHHHHHHHhCCccchhcccceEEEeCCCCEEEccccccccccccc--
Confidence 455555432 222368888888888888765 457899999998763211
Q ss_pred ccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChHHHHHHHH-HhHh-hhcCChhHHHHH
Q 042825 526 SILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT-GRKVVDATHSDPEYIIHLAT-WFQK-MHKNHDTFQMAI 602 (631)
Q Consensus 526 ~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~Ellt-G~~P~~~~~~~~~~~~~l~~-~~~~-~~~~~~~l~~~i 602 (631)
....++..|+|||++....++.++||||||+++|||++ |+.||....... ....+.. +... ....++.+.+++
T Consensus 157 ---~~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~li 232 (256)
T cd05039 157 ---DSGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD-VVPHVEKGYRMEAPEGCPPEVYKVM 232 (256)
T ss_pred ---ccCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHHH-HHHHHhcCCCCCCccCCCHHHHHHH
Confidence 12345678999999988889999999999999999997 999997543221 1111111 1100 111246889999
Q ss_pred HhhcCCChhhHHhHHHHHHH
Q 042825 603 DKTIQLDEENLANVSTVAEL 622 (631)
Q Consensus 603 d~~L~~d~~~r~~~~~vl~l 622 (631)
.+|+..+|++|+++.++++.
T Consensus 233 ~~~l~~~p~~Rp~~~~l~~~ 252 (256)
T cd05039 233 KDCWELDPAKRPTFKQLREQ 252 (256)
T ss_pred HHHhccChhhCcCHHHHHHH
Confidence 99999999999999988764
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk |
| >cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5 | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.1e-18 Score=179.64 Aligned_cols=192 Identities=20% Similarity=0.310 Sum_probs=136.6
Q ss_pred cccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc--------------------------
Q 042825 420 FSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK-------------------------- 472 (631)
Q Consensus 420 f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~-------------------------- 472 (631)
|.....||+|+||.||++... ++..||||++.... ....+.+.+|+.++.+
T Consensus 24 ~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~~ 101 (292)
T cd06658 24 LDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRK--QQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEFL 101 (292)
T ss_pred HhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecch--HHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeCC
Confidence 334467999999999999865 58899999986532 2345668888887765
Q ss_pred --CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCCccc
Q 042825 473 --GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENGKHS 526 (631)
Q Consensus 473 --gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~~~~ 526 (631)
+++.+++. ...+++.....++.+++.| +.++|+|||+++..... ..
T Consensus 102 ~~~~L~~~~~------~~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~--~~ 173 (292)
T cd06658 102 EGGALTDIVT------HTRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKE--VP 173 (292)
T ss_pred CCCcHHHHHh------cCCCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCEEEccCcchhhcccc--cc
Confidence 23333331 1246777788888777765 45789999999765322 11
Q ss_pred cccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHhHhh----hcCChhHHHHH
Q 042825 527 ILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQKM----HKNHDTFQMAI 602 (631)
Q Consensus 527 ~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~~~~----~~~~~~l~~~i 602 (631)
......|+..|+|||+..+..++.++|||||||++|||++|+.||....... ....+....... ...+..+.+++
T Consensus 174 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li 252 (292)
T cd06658 174 KRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQ-AMRRIRDNLPPRVKDSHKVSSVLRGFL 252 (292)
T ss_pred cCceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHhcCCCccccccccCHHHHHHH
Confidence 2234568999999999988889999999999999999999999997543221 111111111111 12245789999
Q ss_pred HhhcCCChhhHHhHHHHHHH
Q 042825 603 DKTIQLDEENLANVSTVAEL 622 (631)
Q Consensus 603 d~~L~~d~~~r~~~~~vl~l 622 (631)
..++..+|.+|+++.++++.
T Consensus 253 ~~~l~~~P~~Rpt~~~il~~ 272 (292)
T cd06658 253 DLMLVREPSQRATAQELLQH 272 (292)
T ss_pred HHHccCChhHCcCHHHHhhC
Confidence 99999999999999988763
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express |
| >cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.7e-18 Score=177.20 Aligned_cols=195 Identities=23% Similarity=0.290 Sum_probs=135.6
Q ss_pred cccceeecCCCceEEEEEEecC-CcEEEEEEEecCCCCHHHHHHHHHHHHHHhc--------------------------
Q 042825 420 FSEENRLGRGGVGTVYKGELKD-GTEVGVKRMELGSVTEQGIAQFESEITVLTK-------------------------- 472 (631)
Q Consensus 420 f~~~~~iG~G~fg~Vyk~~~~~-g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~-------------------------- 472 (631)
|+..+.||+|+||.||+|+.+. ++.||+|+++...........+.+|++++.+
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~ 80 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELK 80 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCce
Confidence 5677899999999999999874 8999999997543332233456667665533
Q ss_pred ---------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeecccccc
Q 042825 473 ---------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLV 519 (631)
Q Consensus 473 ---------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~ 519 (631)
+++.+++. ......+++.....++.++++| +.+||+|||+++..
T Consensus 81 ~~l~~e~~~~~l~~~l~---~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~h~~l~~~nili~~~~~~~l~dfg~~~~~ 157 (287)
T cd07838 81 LTLVFEHVDQDLATYLS---KCPKPGLPPETIKDLMRQLLRGVDFLHSHRIVHRDLKPQNILVTSDGQVKIADFGLARIY 157 (287)
T ss_pred eEEEehhcccCHHHHHH---HccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhEEEccCCCEEEeccCcceec
Confidence 11222221 1112358888889998888875 45789999999876
Q ss_pred CCCCccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHh---------H-
Q 042825 520 PENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWF---------Q- 589 (631)
Q Consensus 520 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~---------~- 589 (631)
.... ......++..|+|||++.+..++.++|||||||++|||++|+.||......+ ....+.+.. .
T Consensus 158 ~~~~---~~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 233 (287)
T cd07838 158 SFEM---ALTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEAD-QLDKIFDVIGLPSEEEWPRN 233 (287)
T ss_pred cCCc---ccccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChHH-HHHHHHHHcCCCChHhcCCC
Confidence 4221 1233457889999999998889999999999999999999999997644321 111111110 0
Q ss_pred -----------------h-hhcCChhHHHHHHhhcCCChhhHHhHHHHHH
Q 042825 590 -----------------K-MHKNHDTFQMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 590 -----------------~-~~~~~~~l~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
. .......+.+++.+|+..||.+|+++.+++.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~ 283 (287)
T cd07838 234 VSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQ 283 (287)
T ss_pred cccchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhc
Confidence 0 0011246688999999999999999988764
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both |
| >cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7 | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.5e-18 Score=178.99 Aligned_cols=196 Identities=21% Similarity=0.274 Sum_probs=138.9
Q ss_pred CcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCC---HHHHHHHHHHHHHHhc----------------------
Q 042825 419 NFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVT---EQGIAQFESEITVLTK---------------------- 472 (631)
Q Consensus 419 ~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~---~~~~~~~~~Ei~~l~~---------------------- 472 (631)
+|+..+.||+|+||.||+|... +|+.||||++...... ......+..|++++.+
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLV 80 (298)
T ss_pred CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEE
Confidence 4777889999999999999965 5899999999765432 2233456778877765
Q ss_pred -----CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCC
Q 042825 473 -----GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENG 523 (631)
Q Consensus 473 -----gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~ 523 (631)
|+|.+++. .....+++.....++.+++++ +.++|+|||+++......
T Consensus 81 ~e~~~~~L~~~i~----~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~ 156 (298)
T cd07841 81 FEFMETDLEKVIK----DKSIVLTPADIKSYMLMTLRGLEYLHSNWILHRDLKPNNLLIASDGVLKLADFGLARSFGSPN 156 (298)
T ss_pred EcccCCCHHHHHh----ccCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCChhhEEEcCCCCEEEccceeeeeccCCC
Confidence 44444442 112368899999999888875 457899999998764221
Q ss_pred ccccccccccCccccccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHH---------HhH----
Q 042825 524 KHSILTKVAGTFGYLAPEYIVT-GRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLAT---------WFQ---- 589 (631)
Q Consensus 524 ~~~~~~~~~gt~~Y~aPE~~~~-~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~---------~~~---- 589 (631)
.......++..|+|||.+.+ ..++.++|||||||++|||++|..||....... ....+.. |..
T Consensus 157 --~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 233 (298)
T cd07841 157 --RKMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDID-QLGKIFEALGTPTEENWPGVTSL 233 (298)
T ss_pred --ccccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHH-HHHHHHHHcCCCchhhhhhcccc
Confidence 12233456889999998865 457899999999999999999988887543321 1111111 100
Q ss_pred ----------------hhhcCChhHHHHHHhhcCCChhhHHhHHHHHH
Q 042825 590 ----------------KMHKNHDTFQMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 590 ----------------~~~~~~~~l~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
.....+.++.++|.+|+..+|.+|+++.++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~ 281 (298)
T cd07841 234 PDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALE 281 (298)
T ss_pred cccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhh
Confidence 00112457889999999999999999999876
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is |
| >cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6 | Back alignment and domain information |
|---|
Probab=99.79 E-value=9.1e-19 Score=180.82 Aligned_cols=191 Identities=18% Similarity=0.308 Sum_probs=136.3
Q ss_pred cccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc--------------------------
Q 042825 420 FSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK-------------------------- 472 (631)
Q Consensus 420 f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~-------------------------- 472 (631)
|+....||+|+||.||+++.. +++.||+|.+..... ...+.+.+|+.++..
T Consensus 23 ~~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~--~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~~ 100 (297)
T cd06659 23 LENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQ--QRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFL 100 (297)
T ss_pred HHhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEeccc--chHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEecC
Confidence 334567999999999999865 689999999865432 234567888887765
Q ss_pred --CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCCccc
Q 042825 473 --GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENGKHS 526 (631)
Q Consensus 473 --gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~~~~ 526 (631)
+++..++. ...+++.....++.+++.+ +.+||+|||+++...... .
T Consensus 101 ~~~~L~~~~~------~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~--~ 172 (297)
T cd06659 101 QGGALTDIVS------QTRLNEEQIATVCESVLQALCYLHSQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDV--P 172 (297)
T ss_pred CCCCHHHHHh------hcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHeEEccCCcEEEeechhHhhccccc--c
Confidence 22222221 1346788888888777765 457899999997653221 1
Q ss_pred cccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHh----HhhhcCChhHHHHH
Q 042825 527 ILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWF----QKMHKNHDTFQMAI 602 (631)
Q Consensus 527 ~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~----~~~~~~~~~l~~~i 602 (631)
......|+..|+|||++.+..++.++|||||||++|||++|+.||......+ ....+.... ......+..+.+++
T Consensus 173 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~i 251 (297)
T cd06659 173 KRKSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQ-AMKRLRDSPPPKLKNAHKISPVLRDFL 251 (297)
T ss_pred cccceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHhccCCCCccccCCCCHHHHHHH
Confidence 2234678999999999988889999999999999999999999997543221 111111110 11112346789999
Q ss_pred HhhcCCChhhHHhHHHHHH
Q 042825 603 DKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 603 d~~L~~d~~~r~~~~~vl~ 621 (631)
.+++..+|.+|+++.++++
T Consensus 252 ~~~l~~~P~~Rps~~~ll~ 270 (297)
T cd06659 252 ERMLTREPQERATAQELLD 270 (297)
T ss_pred HHHhcCCcccCcCHHHHhh
Confidence 9999999999999998876
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i |
| >cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros | Back alignment and domain information |
|---|
Probab=99.79 E-value=5.2e-19 Score=179.44 Aligned_cols=197 Identities=27% Similarity=0.431 Sum_probs=137.9
Q ss_pred eeecCCCceEEEEEEecC-------CcEEEEEEEecCCCCHHHHHHHHHHHHHHhc------------------------
Q 042825 424 NRLGRGGVGTVYKGELKD-------GTEVGVKRMELGSVTEQGIAQFESEITVLTK------------------------ 472 (631)
Q Consensus 424 ~~iG~G~fg~Vyk~~~~~-------g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~------------------------ 472 (631)
+.||+|+||.||+|+..+ ++.+|+|.+.... ......+|.+|++++++
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 79 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGA-TDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIME 79 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhccc-chhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEe
Confidence 468999999999998653 3579999886542 22345678889888766
Q ss_pred ----CChhHHhHhhhhc--CCCCCCHHHHHHHHHHhhcC------------------------C-----CcEEEeecccc
Q 042825 473 ----GTLGRHLFNWEEE--GLEPLEWNTRLNIALDVARG------------------------D-----DMRVADFGLVR 517 (631)
Q Consensus 473 ----gsL~~~L~~~~~~--~~~~L~~~~~~~I~~~ia~g------------------------~-----~~kl~DFGla~ 517 (631)
++|.+++...... ....+.|...+.++.+++.+ . .++++|||+++
T Consensus 80 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~~~ 159 (269)
T cd05044 80 LMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMHFIHRDLAARNCLVSEKGYDADRVVKIGDFGLAR 159 (269)
T ss_pred ccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCCcccCCCChheEEEecCCCCCCcceEECCccccc
Confidence 5676766542211 22347888888888887765 2 57899999998
Q ss_pred ccCCCCccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChHHHHHHHH-H-hHhhhcC
Q 042825 518 LVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT-GRKVVDATHSDPEYIIHLAT-W-FQKMHKN 594 (631)
Q Consensus 518 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~Ellt-G~~P~~~~~~~~~~~~~l~~-~-~~~~~~~ 594 (631)
...............++..|+|||++.+..++.++|||||||++|||+| |+.||....... ....+.. . .......
T Consensus 160 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~ 238 (269)
T cd05044 160 DIYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQE-VLQHVTAGGRLQKPENC 238 (269)
T ss_pred ccccccccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCHHH-HHHHHhcCCccCCcccc
Confidence 6642222112223356788999999998899999999999999999998 999997432211 1111110 0 0111122
Q ss_pred ChhHHHHHHhhcCCChhhHHhHHHHHHH
Q 042825 595 HDTFQMAIDKTIQLDEENLANVSTVAEL 622 (631)
Q Consensus 595 ~~~l~~~id~~L~~d~~~r~~~~~vl~l 622 (631)
++.+.+++.+|+..+|.+|+++.++++.
T Consensus 239 ~~~~~~li~~~l~~~p~~Rp~~~~i~~~ 266 (269)
T cd05044 239 PDKIYQLMTNCWAQDPSERPTFDRIQEI 266 (269)
T ss_pred hHHHHHHHHHHcCCCcccCCCHHHHHHH
Confidence 4678999999999999999999998764
|
Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male |
| >cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Probab=99.79 E-value=2.2e-18 Score=176.47 Aligned_cols=199 Identities=22% Similarity=0.358 Sum_probs=140.0
Q ss_pred CCcccceeecCCCceEEEEEEec-----CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc--------------------
Q 042825 418 NNFSEENRLGRGGVGTVYKGELK-----DGTEVGVKRMELGSVTEQGIAQFESEITVLTK-------------------- 472 (631)
Q Consensus 418 ~~f~~~~~iG~G~fg~Vyk~~~~-----~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~-------------------- 472 (631)
+.|...+.||+|+||.||++..+ ++..||+|++... .....+.|.+|++++.+
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~ 81 (284)
T cd05081 4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHS--TAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRN 81 (284)
T ss_pred ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccC--CHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCc
Confidence 46778899999999999999753 4789999998654 34456788999988876
Q ss_pred ----------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccc
Q 042825 473 ----------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRL 518 (631)
Q Consensus 473 ----------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~ 518 (631)
|+|.+++. .....++|.....++.+++.+ +.+||+|||+++.
T Consensus 82 ~~lv~e~~~~~~L~~~l~----~~~~~l~~~~~~~~~~~l~~aL~~LH~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~ 157 (284)
T cd05081 82 LRLVMEYLPYGSLRDYLQ----KHRERLDHRKLLLYASQICKGMEYLGSKRYVHRDLATRNILVESENRVKIGDFGLTKV 157 (284)
T ss_pred eEEEEEecCCCCHHHHHH----hcCcCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHhhEEECCCCeEEECCCccccc
Confidence 44444442 222457888888888888765 4578999999987
Q ss_pred cCCCCccc-cccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCh-----------HHHHHHHH
Q 042825 519 VPENGKHS-ILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDP-----------EYIIHLAT 586 (631)
Q Consensus 519 ~~~~~~~~-~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~-----------~~~~~l~~ 586 (631)
+....... ......++..|+|||+..+..++.++|||||||++|||++|..|+....... .....+.+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (284)
T cd05081 158 LPQDKEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAEFMRMMGNDKQGQMIVYHLIE 237 (284)
T ss_pred ccCCCcceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchhhhhhcccccccccchHHHHH
Confidence 64322211 1122234557999999988889999999999999999999987764321110 00011111
Q ss_pred HhHhh------hcCChhHHHHHHhhcCCChhhHHhHHHHHHH
Q 042825 587 WFQKM------HKNHDTFQMAIDKTIQLDEENLANVSTVAEL 622 (631)
Q Consensus 587 ~~~~~------~~~~~~l~~~id~~L~~d~~~r~~~~~vl~l 622 (631)
+.... ...+.++.+++.+|+..+|++|+++.++++.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~ 279 (284)
T cd05081 238 LLKNNGRLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQ 279 (284)
T ss_pred HHhcCCcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHH
Confidence 11111 1123579999999999999999999998875
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th |
| >cd05122 PKc_STE Catalytic domain of STE family Protein Kinases | Back alignment and domain information |
|---|
Probab=99.79 E-value=2e-18 Score=172.45 Aligned_cols=194 Identities=23% Similarity=0.361 Sum_probs=141.5
Q ss_pred CcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc-------------------------
Q 042825 419 NFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK------------------------- 472 (631)
Q Consensus 419 ~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~------------------------- 472 (631)
+|+..+.||+|++|.||++... +++.+++|++..... ...+.+.+|++.+.+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~ 78 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESK--EKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEF 78 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccch--hHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEec
Confidence 4677899999999999999976 688999999976532 356778899888765
Q ss_pred ---CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCCcc
Q 042825 473 ---GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENGKH 525 (631)
Q Consensus 473 ---gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~~~ 525 (631)
++|.+++. .....+++.....++.+++.+ +.++|+|||.+........
T Consensus 79 ~~~~~L~~~~~----~~~~~~~~~~~~~i~~~i~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~- 153 (253)
T cd05122 79 CSGGSLKDLLK----STNQTLTESQIAYVCKELLKGLEYLHSNGIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKA- 153 (253)
T ss_pred CCCCcHHHHHh----hcCCCCCHHHHHHHHHHHHHHHHHhhcCCEecCCCCHHHEEEccCCeEEEeecccccccccccc-
Confidence 34443332 222467888888888777755 4578999999987643221
Q ss_pred ccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHhHhhh-cC--ChhHHHHH
Q 042825 526 SILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQKMH-KN--HDTFQMAI 602 (631)
Q Consensus 526 ~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~~~~~-~~--~~~l~~~i 602 (631)
.....++..|++||++....++.++||||||+++|||++|+.||..................... .. +.++.+++
T Consensus 154 --~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 231 (253)
T cd05122 154 --RNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPMKALFKIATNGPPGLRNPEKWSDEFKDFL 231 (253)
T ss_pred --ccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhcCCCCcCcccccCHHHHHHH
Confidence 23456889999999998888999999999999999999999999754322111111111111111 11 46789999
Q ss_pred HhhcCCChhhHHhHHHHHH
Q 042825 603 DKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 603 d~~L~~d~~~r~~~~~vl~ 621 (631)
..++..||.+|+++.++++
T Consensus 232 ~~~l~~~p~~R~t~~~~l~ 250 (253)
T cd05122 232 KKCLQKNPEKRPTAEQLLK 250 (253)
T ss_pred HHHccCChhhCCCHHHHhc
Confidence 9999999999999998875
|
Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core |
| >cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase | Back alignment and domain information |
|---|
Probab=99.79 E-value=2e-18 Score=173.20 Aligned_cols=198 Identities=21% Similarity=0.302 Sum_probs=144.3
Q ss_pred CcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc-------------------------
Q 042825 419 NFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK------------------------- 472 (631)
Q Consensus 419 ~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~------------------------- 472 (631)
+|...+.||+|++|.||+|... +++.|++|++..........+.+.+|++++.+
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 80 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFL 80 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEE
Confidence 4677899999999999999976 68999999997665444567788999988876
Q ss_pred -----CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCC
Q 042825 473 -----GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENG 523 (631)
Q Consensus 473 -----gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~ 523 (631)
++|.+++. . ...++|..+..++.+++++ +.++|+|||.+.......
T Consensus 81 e~~~~~~L~~~~~----~-~~~~~~~~~~~~~~~l~~~l~~lh~~~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~ 155 (260)
T cd06606 81 EYVSGGSLSSLLK----K-FGKLPEPVIRKYTRQILEGLAYLHSNGIVHRDIKGANILVDSDGVVKLADFGCAKRLGDIE 155 (260)
T ss_pred EecCCCcHHHHHH----H-cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCCCEEEcccccEEeccccc
Confidence 22323322 1 1267888888888887765 457899999998775322
Q ss_pred ccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHH--HhHh-hhcCChhHHH
Q 042825 524 KHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLAT--WFQK-MHKNHDTFQM 600 (631)
Q Consensus 524 ~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~--~~~~-~~~~~~~l~~ 600 (631)
.........++..|+|||......++.++||||||++++||++|+.||............+.. .... ....+..+.+
T Consensus 156 ~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 235 (260)
T cd06606 156 TGEGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGNPMAALYKIGSSGEPPEIPEHLSEEAKD 235 (260)
T ss_pred ccccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHhccccCCCcCCCcccCHHHHH
Confidence 111134467889999999998888999999999999999999999999865422111111110 0000 1112467999
Q ss_pred HHHhhcCCChhhHHhHHHHHH
Q 042825 601 AIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 601 ~id~~L~~d~~~r~~~~~vl~ 621 (631)
++.+++..+|.+|+++.++++
T Consensus 236 ~i~~~l~~~p~~Rp~~~~ll~ 256 (260)
T cd06606 236 FLRKCLRRDPKKRPTADELLQ 256 (260)
T ss_pred HHHHhCcCChhhCCCHHHHhh
Confidence 999999999999999998775
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK |
| >cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.6e-18 Score=179.89 Aligned_cols=194 Identities=22% Similarity=0.325 Sum_probs=138.6
Q ss_pred cCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCC-CCHHHHHHHHHHHHHHhc----------------------
Q 042825 417 TNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGS-VTEQGIAQFESEITVLTK---------------------- 472 (631)
Q Consensus 417 t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~-~~~~~~~~~~~Ei~~l~~---------------------- 472 (631)
.+.|+..+.||+|+||+||+|+.. +++.||+|++.... ......+++.+|++++.+
T Consensus 14 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv 93 (307)
T cd06607 14 EKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLV 93 (307)
T ss_pred chhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEE
Confidence 345888899999999999999975 58999999986543 233445678899988876
Q ss_pred -----CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCC
Q 042825 473 -----GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENG 523 (631)
Q Consensus 473 -----gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~ 523 (631)
|++.+.+. .....+.+.....++.+++.+ +.++|+|||+++....
T Consensus 94 ~e~~~g~l~~~~~----~~~~~l~~~~~~~~~~ql~~~L~~LH~~~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~-- 167 (307)
T cd06607 94 MEYCLGSASDILE----VHKKPLQEVEIAAICHGALQGLAYLHSHERIHRDIKAGNILLTEPGTVKLADFGSASLVSP-- 167 (307)
T ss_pred HHhhCCCHHHHHH----HcccCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEECCCCCEEEeecCcceecCC--
Confidence 22222221 123458888888888887765 4578999999976532
Q ss_pred ccccccccccCcccccccccc---cCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHhHhhh---cCChh
Q 042825 524 KHSILTKVAGTFGYLAPEYIV---TGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQKMH---KNHDT 597 (631)
Q Consensus 524 ~~~~~~~~~gt~~Y~aPE~~~---~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~~~~~---~~~~~ 597 (631)
.....++..|+|||++. ...++.++|||||||++|||+||+.||....... ....+........ ..+..
T Consensus 168 ----~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 242 (307)
T cd06607 168 ----ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS-ALYHIAQNDSPTLSSNDWSDY 242 (307)
T ss_pred ----CCCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHH-HHHHHhcCCCCCCCchhhCHH
Confidence 12356888999999874 3568899999999999999999999997543211 1111111000000 11357
Q ss_pred HHHHHHhhcCCChhhHHhHHHHHH
Q 042825 598 FQMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 598 l~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
+.+++.+|+..+|++|+++.++++
T Consensus 243 ~~~li~~~l~~~p~~Rp~~~~il~ 266 (307)
T cd06607 243 FRNFVDSCLQKIPQDRPSSEELLK 266 (307)
T ss_pred HHHHHHHHhcCChhhCcCHHHHhc
Confidence 899999999999999999998875
|
Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily |
| >cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.5e-18 Score=178.34 Aligned_cols=197 Identities=19% Similarity=0.304 Sum_probs=135.4
Q ss_pred CCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc------------------------
Q 042825 418 NNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK------------------------ 472 (631)
Q Consensus 418 ~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~------------------------ 472 (631)
++|+..+.||+|+||.||+|+.+ +++.||||.+...... .....+.+|++++.+
T Consensus 5 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 83 (291)
T cd07844 5 ETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEE-GAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVFE 83 (291)
T ss_pred cceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEeccccc-CCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEEe
Confidence 57888999999999999999976 5899999998754321 122456778888865
Q ss_pred ---CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCCcc
Q 042825 473 ---GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENGKH 525 (631)
Q Consensus 473 ---gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~~~ 525 (631)
++|.+++.. ....+++.....++.+++.| +.+||+|||+++......
T Consensus 84 ~~~~~L~~~~~~----~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~-- 157 (291)
T cd07844 84 YLDTDLKQYMDD----CGGGLSMHNVRLFLFQLLRGLAYCHQRRVLHRDLKPQNLLISERGELKLADFGLARAKSVPS-- 157 (291)
T ss_pred cCCCCHHHHHHh----CCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCHHHEEEcCCCCEEECccccccccCCCC--
Confidence 445444432 22356777777777777665 457899999987643111
Q ss_pred ccccccccCccccccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHH---------Hh-------
Q 042825 526 SILTKVAGTFGYLAPEYIVT-GRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLAT---------WF------- 588 (631)
Q Consensus 526 ~~~~~~~gt~~Y~aPE~~~~-~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~---------~~------- 588 (631)
.......++..|+|||+..+ ..++.++||||+||++|||++|+.||............+.. |.
T Consensus 158 ~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (291)
T cd07844 158 KTYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWPGVSSNPE 237 (291)
T ss_pred ccccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCCChhhhhhhhhccc
Confidence 11223457889999999865 45899999999999999999999999754321111110100 00
Q ss_pred -----------H---hh-hcCC--hhHHHHHHhhcCCChhhHHhHHHHHH
Q 042825 589 -----------Q---KM-HKNH--DTFQMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 589 -----------~---~~-~~~~--~~l~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
. .. .... .++.+++.++|..+|+.|+++.++++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~ 287 (291)
T cd07844 238 FKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMK 287 (291)
T ss_pred cccccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhc
Confidence 0 00 0112 56779999999999999999988764
|
Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the |
| >cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.6e-18 Score=174.45 Aligned_cols=191 Identities=23% Similarity=0.324 Sum_probs=139.0
Q ss_pred CcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCC---CHHHHHHHHHHHHHHhc----------------------
Q 042825 419 NFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSV---TEQGIAQFESEITVLTK---------------------- 472 (631)
Q Consensus 419 ~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~---~~~~~~~~~~Ei~~l~~---------------------- 472 (631)
+|...+.||+|+||.||+|... +++.|++|.+..... .....+.+.+|++++.+
T Consensus 1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (258)
T cd06632 1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIF 80 (258)
T ss_pred CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEE
Confidence 3667789999999999999976 689999999865432 23355678899888765
Q ss_pred ------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCC
Q 042825 473 ------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPEN 522 (631)
Q Consensus 473 ------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~ 522 (631)
++|.+++.. ...+++.....++.+++++ ..+||+|||+++.....
T Consensus 81 ~e~~~~~~L~~~~~~-----~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~~ 155 (258)
T cd06632 81 LELVPGGSLAKLLKK-----YGSFPEPVIRLYTRQILLGLEYLHDRNTVHRDIKGANILVDTNGVVKLADFGMAKQVVEF 155 (258)
T ss_pred EEecCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEccCccceecccc
Confidence 344444421 1346777777777777754 45789999999876322
Q ss_pred CccccccccccCcccccccccccCC-CCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHhH--hh----hcCC
Q 042825 523 GKHSILTKVAGTFGYLAPEYIVTGR-ITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQ--KM----HKNH 595 (631)
Q Consensus 523 ~~~~~~~~~~gt~~Y~aPE~~~~~~-~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~~--~~----~~~~ 595 (631)
. ......|+..|+|||.+.... ++.++|+|||||++|||++|+.||...... . ....+.. .. ....
T Consensus 156 ~---~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~--~--~~~~~~~~~~~~~~~~~~~ 228 (258)
T cd06632 156 S---FAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGV--A--AVFKIGRSKELPPIPDHLS 228 (258)
T ss_pred c---cccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHH--H--HHHHHHhcccCCCcCCCcC
Confidence 1 223456899999999987766 899999999999999999999999754321 1 1111111 01 1124
Q ss_pred hhHHHHHHhhcCCChhhHHhHHHHHH
Q 042825 596 DTFQMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 596 ~~l~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
+++.+++.+++..+|.+|+++.++++
T Consensus 229 ~~~~~li~~~l~~~p~~Rp~~~~~l~ 254 (258)
T cd06632 229 DEAKDFILKCLQRDPSLRPTAAELLE 254 (258)
T ss_pred HHHHHHHHHHhhcCcccCcCHHHHhc
Confidence 67899999999999999999998764
|
Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops |
| >cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.5e-18 Score=183.75 Aligned_cols=203 Identities=17% Similarity=0.227 Sum_probs=138.6
Q ss_pred hcCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhcCChh---HHh------------
Q 042825 416 ATNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTKGTLG---RHL------------ 479 (631)
Q Consensus 416 ~t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~gsL~---~~L------------ 479 (631)
..++|+..+.||+|+||.||+|+.. +|+.||||++...........++.+|++++.+-... ..+
T Consensus 14 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 93 (353)
T cd07850 14 VLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEF 93 (353)
T ss_pred hhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCcccc
Confidence 4578999999999999999999965 689999999865433344556777898888761110 000
Q ss_pred ------Hhhhhc-----CCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCCc
Q 042825 480 ------FNWEEE-----GLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENGK 524 (631)
Q Consensus 480 ------~~~~~~-----~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~~ 524 (631)
.++... ....++......++.+++.| +.+||+|||+++.....
T Consensus 94 ~~~~lv~e~~~~~l~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~-- 171 (353)
T cd07850 94 QDVYLVMELMDANLCQVIQMDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS-- 171 (353)
T ss_pred CcEEEEEeccCCCHHHHHhhcCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEccCccceeCCCC--
Confidence 000000 01125666666677777654 46789999999876421
Q ss_pred cccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHH-------------------
Q 042825 525 HSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLA------------------- 585 (631)
Q Consensus 525 ~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~------------------- 585 (631)
.......++..|+|||++.+..++.++|||||||++|||++|+.||....... ....+.
T Consensus 172 -~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (353)
T cd07850 172 -FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHID-QWNKIIEQLGTPSDEFMSRLQPTVR 249 (353)
T ss_pred -CCCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHH-HHHHHHHhcCCCCHHHHHHhhhhhh
Confidence 12234568899999999998899999999999999999999999997543211 000000
Q ss_pred HHhHh-----------hh--------------cCChhHHHHHHhhcCCChhhHHhHHHHHHH
Q 042825 586 TWFQK-----------MH--------------KNHDTFQMAIDKTIQLDEENLANVSTVAEL 622 (631)
Q Consensus 586 ~~~~~-----------~~--------------~~~~~l~~~id~~L~~d~~~r~~~~~vl~l 622 (631)
.+... .. ...+.+.+++.+||..||.+|+++.++++-
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~ 311 (353)
T cd07850 250 NYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQH 311 (353)
T ss_pred HHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 01000 00 012357899999999999999999998754
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK |
| >cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.9e-18 Score=176.91 Aligned_cols=196 Identities=20% Similarity=0.294 Sum_probs=137.0
Q ss_pred cccceeecCCCceEEEEEEe-----cCCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc----------------------
Q 042825 420 FSEENRLGRGGVGTVYKGEL-----KDGTEVGVKRMELGSVTEQGIAQFESEITVLTK---------------------- 472 (631)
Q Consensus 420 f~~~~~iG~G~fg~Vyk~~~-----~~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~---------------------- 472 (631)
|...+.||+|+||+||++.. .++..||+|.+.... .......|.+|++++.+
T Consensus 6 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 84 (283)
T cd05080 6 LKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKREC-GQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQ 84 (283)
T ss_pred ceeceecccCCCcEEEEeeEccccCCCCceEEEEEecccc-ChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceEE
Confidence 37789999999999988653 257899999987543 23355778899998876
Q ss_pred --------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccC
Q 042825 473 --------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVP 520 (631)
Q Consensus 473 --------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~ 520 (631)
++|.+++. ...+++..+..++.++++| +.++|+|||+++...
T Consensus 85 lv~e~~~~~~l~~~~~------~~~l~~~~~~~i~~~l~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~ 158 (283)
T cd05080 85 LIMEYVPLGSLRDYLP------KHKLNLAQLLLFAQQICEGMAYLHSQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVP 158 (283)
T ss_pred EEecCCCCCCHHHHHH------HcCCCHHHHHHHHHHHHHHHHHHHHCCeeccccChheEEEcCCCcEEEeecccccccC
Confidence 33333332 1247888888988888765 457899999998764
Q ss_pred CCCcc-ccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHH-------HHHHHhH---
Q 042825 521 ENGKH-SILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYII-------HLATWFQ--- 589 (631)
Q Consensus 521 ~~~~~-~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~-------~l~~~~~--- 589 (631)
..... .......++..|+|||+.....++.++|||||||++|||+||+.|+........... ....+..
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (283)
T cd05080 159 EGHEYYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQGQMTVVRLIELLE 238 (283)
T ss_pred CcchhhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhhhhhcccccccchhhhhhhhh
Confidence 22211 111223466789999999888899999999999999999999999864322110000 0000000
Q ss_pred h------hhcCChhHHHHHHhhcCCChhhHHhHHHHHHH
Q 042825 590 K------MHKNHDTFQMAIDKTIQLDEENLANVSTVAEL 622 (631)
Q Consensus 590 ~------~~~~~~~l~~~id~~L~~d~~~r~~~~~vl~l 622 (631)
. ......++.+++.+|+..+|.+||++.++++.
T Consensus 239 ~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~ 277 (283)
T cd05080 239 RGMRLPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIPI 277 (283)
T ss_pred cCCCCCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHHH
Confidence 0 01113578999999999999999999998864
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign |
| >cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3 | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.1e-18 Score=180.12 Aligned_cols=195 Identities=18% Similarity=0.320 Sum_probs=140.0
Q ss_pred cCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc-----------------------
Q 042825 417 TNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK----------------------- 472 (631)
Q Consensus 417 t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~----------------------- 472 (631)
..+|...+.||+|+||.||+|+.. +++.||+|.+...... ..+.+.+|+.++..
T Consensus 18 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~ 95 (297)
T cd06656 18 KKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQP--KKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVM 95 (297)
T ss_pred hhhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccc--hHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEee
Confidence 357888999999999999999964 6999999999764332 34667888887765
Q ss_pred -----CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCC
Q 042825 473 -----GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENG 523 (631)
Q Consensus 473 -----gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~ 523 (631)
+++.+++. ...+.+.....++.+++.+ +.++|+|||+++......
T Consensus 96 e~~~~~~L~~~~~------~~~~~~~~~~~~~~~l~~~L~~LH~~~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~ 169 (297)
T cd06656 96 EYLAGGSLTDVVT------ETCMDEGQIAAVCRECLQALDFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ 169 (297)
T ss_pred cccCCCCHHHHHH------hCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEECcCccceEccCCc
Confidence 34444332 1346777777777776654 457899999998764222
Q ss_pred ccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHhH----hhhcCChhHH
Q 042825 524 KHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQ----KMHKNHDTFQ 599 (631)
Q Consensus 524 ~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~~----~~~~~~~~l~ 599 (631)
.......+++.|+|||...+..++.++|||||||++|||++|+.||.......... ....... ........+.
T Consensus 170 --~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 246 (297)
T cd06656 170 --SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALY-LIATNGTPELQNPERLSAVFR 246 (297)
T ss_pred --cCcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchhee-eeccCCCCCCCCccccCHHHH
Confidence 12234568899999999988889999999999999999999999997543321100 0000000 0111235678
Q ss_pred HHHHhhcCCChhhHHhHHHHHHH
Q 042825 600 MAIDKTIQLDEENLANVSTVAEL 622 (631)
Q Consensus 600 ~~id~~L~~d~~~r~~~~~vl~l 622 (631)
+++.+++..+|++|+++.++++.
T Consensus 247 ~li~~~l~~~p~~Rps~~~il~~ 269 (297)
T cd06656 247 DFLNRCLEMDVDRRGSAKELLQH 269 (297)
T ss_pred HHHHHHccCChhhCcCHHHHhcC
Confidence 99999999999999999998763
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.4e-18 Score=176.30 Aligned_cols=200 Identities=20% Similarity=0.302 Sum_probs=142.3
Q ss_pred CCcccceeecCCCceEEEEEEec----CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc---------------------
Q 042825 418 NNFSEENRLGRGGVGTVYKGELK----DGTEVGVKRMELGSVTEQGIAQFESEITVLTK--------------------- 472 (631)
Q Consensus 418 ~~f~~~~~iG~G~fg~Vyk~~~~----~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~--------------------- 472 (631)
++|+..+.||+|+||.||+|+.. .+..+|+|.++... .....+.|.+|+.++.+
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 82 (267)
T cd05066 4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGY-TEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMI 82 (267)
T ss_pred HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCC-CHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEE
Confidence 46778899999999999999864 23479999886543 34456789999988865
Q ss_pred -------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCC
Q 042825 473 -------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPE 521 (631)
Q Consensus 473 -------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~ 521 (631)
++|.+++.. ....+++.+...|+.+++.+ ..++++|||+++.+..
T Consensus 83 v~e~~~~~~L~~~~~~----~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlkp~nili~~~~~~~l~dfg~~~~~~~ 158 (267)
T cd05066 83 VTEYMENGSLDAFLRK----HDGQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILVNSNLVCKVSDFGLSRVLED 158 (267)
T ss_pred EEEcCCCCCHHHHHHh----cCCCCCHHHHHHHHHHHHHHHHHHHHCCEeehhhchhcEEECCCCeEEeCCCCccccccc
Confidence 455555532 22357888888888887765 3468999999987642
Q ss_pred CCccc-cccccccCcccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChHHHHHHHHHhHh--hhcCChh
Q 042825 522 NGKHS-ILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT-GRKVVDATHSDPEYIIHLATWFQK--MHKNHDT 597 (631)
Q Consensus 522 ~~~~~-~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~Ellt-G~~P~~~~~~~~~~~~~l~~~~~~--~~~~~~~ 597 (631)
..... ......++..|+|||++.+..++.++|||||||++||+++ |+.||......+ ....+.+..+. ....++.
T Consensus 159 ~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 237 (267)
T cd05066 159 DPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQD-VIKAIEEGYRLPAPMDCPAA 237 (267)
T ss_pred ccceeeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHHH-HHHHHhCCCcCCCCCCCCHH
Confidence 22111 1122334678999999988889999999999999999887 999997543221 11112211111 1112457
Q ss_pred HHHHHHhhcCCChhhHHhHHHHHHHH
Q 042825 598 FQMAIDKTIQLDEENLANVSTVAELG 623 (631)
Q Consensus 598 l~~~id~~L~~d~~~r~~~~~vl~la 623 (631)
+.+++.+++..+|.+||++.+++++.
T Consensus 238 ~~~li~~~l~~~p~~Rp~~~~i~~~l 263 (267)
T cd05066 238 LHQLMLDCWQKDRNERPKFEQIVSIL 263 (267)
T ss_pred HHHHHHHHcccCchhCCCHHHHHHHH
Confidence 89999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul |
| >cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Probab=99.79 E-value=2e-18 Score=181.61 Aligned_cols=205 Identities=19% Similarity=0.261 Sum_probs=140.0
Q ss_pred cCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhcCC---hhHH--------------
Q 042825 417 TNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTKGT---LGRH-------------- 478 (631)
Q Consensus 417 t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~gs---L~~~-------------- 478 (631)
.++|...+.||+|+||+||+|+.. +++.||||++...........++.+|+.++.+-+ +-.+
T Consensus 4 ~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~ 83 (337)
T cd07858 4 DTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFND 83 (337)
T ss_pred ccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCc
Confidence 457889999999999999999865 5899999998754333334556778888876511 1000
Q ss_pred -----------hHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCC
Q 042825 479 -----------LFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENG 523 (631)
Q Consensus 479 -----------L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~ 523 (631)
+..+.. ....++......++.+++.+ +.+||+|||+++......
T Consensus 84 ~~lv~e~~~~~L~~~~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~ 162 (337)
T cd07858 84 VYIVYELMDTDLHQIIR-SSQTLSDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSEKG 162 (337)
T ss_pred EEEEEeCCCCCHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEECcCccccccCCCc
Confidence 000111 12356777777888777765 457899999998764221
Q ss_pred ccccccccccCccccccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHH------------------
Q 042825 524 KHSILTKVAGTFGYLAPEYIVT-GRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHL------------------ 584 (631)
Q Consensus 524 ~~~~~~~~~gt~~Y~aPE~~~~-~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l------------------ 584 (631)
.......++..|+|||.+.. ..++.++|||||||++|||++|+.||.+..... ....+
T Consensus 163 --~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 239 (337)
T cd07858 163 --DFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVH-QLKLITELLGSPSEEDLGFIRNE 239 (337)
T ss_pred --ccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHH-HHHHHHHHhCCCChHHhhhcCch
Confidence 22334568899999998765 468999999999999999999999997542211 00000
Q ss_pred --HHHhHh------------hhcCChhHHHHHHhhcCCChhhHHhHHHHHHHHHh
Q 042825 585 --ATWFQK------------MHKNHDTFQMAIDKTIQLDEENLANVSTVAELGDH 625 (631)
Q Consensus 585 --~~~~~~------------~~~~~~~l~~~id~~L~~d~~~r~~~~~vl~lal~ 625 (631)
..++.. ....+.++.+++.+|+..+|++|+++.++++.-+.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~~ 294 (337)
T cd07858 240 KARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYL 294 (337)
T ss_pred hhhHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcCcch
Confidence 011100 01224567899999999999999999998865443
|
Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati |
| >cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1 | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.5e-18 Score=178.55 Aligned_cols=197 Identities=20% Similarity=0.310 Sum_probs=139.6
Q ss_pred CCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc------------------------
Q 042825 418 NNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK------------------------ 472 (631)
Q Consensus 418 ~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~------------------------ 472 (631)
++|+..+.||+|+||.||+|..+ +++.+|+|.++...........+.+|++++.+
T Consensus 5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~lv 84 (293)
T cd07843 5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYMV 84 (293)
T ss_pred hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEEE
Confidence 46888899999999999999976 58899999997654333333456778887765
Q ss_pred -----CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCC
Q 042825 473 -----GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENG 523 (631)
Q Consensus 473 -----gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~ 523 (631)
++|.+.+. .....+++.....++.+++.+ +.+||+|||+++......
T Consensus 85 ~e~~~~~L~~~~~----~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~ 160 (293)
T cd07843 85 MEYVEHDLKSLME----TMKQPFLQSEVKCLMLQLLSGVAHLHDNWILHRDLKTSNLLLNNRGILKICDFGLAREYGSPL 160 (293)
T ss_pred ehhcCcCHHHHHH----hccCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECCCCcEEEeecCceeeccCCc
Confidence 22222221 222358888888999888876 457899999998764221
Q ss_pred ccccccccccCcccccccccccCC-CCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHH---------Hh-----
Q 042825 524 KHSILTKVAGTFGYLAPEYIVTGR-ITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLAT---------WF----- 588 (631)
Q Consensus 524 ~~~~~~~~~gt~~Y~aPE~~~~~~-~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~---------~~----- 588 (631)
.......++..|+|||.+.+.. ++.++||||+||++|||++|+.||........ ...+.. |.
T Consensus 161 --~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 237 (293)
T cd07843 161 --KPYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQ-LNKIFKLLGTPTEKIWPGFSEL 237 (293)
T ss_pred --cccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHHH-HHHHHHHhCCCchHHHHHhhcc
Confidence 1223456788999999987544 68999999999999999999999975432211 111111 10
Q ss_pred -----------------Hhhhc--CChhHHHHHHhhcCCChhhHHhHHHHHH
Q 042825 589 -----------------QKMHK--NHDTFQMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 589 -----------------~~~~~--~~~~l~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
..... .++.+.++|.+++..+|++|+++.++++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~ 289 (293)
T cd07843 238 PGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALK 289 (293)
T ss_pred chhcccccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhc
Confidence 00000 2456789999999999999999998875
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the |
| >cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.9e-18 Score=179.33 Aligned_cols=195 Identities=22% Similarity=0.351 Sum_probs=138.5
Q ss_pred CCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc------------------------
Q 042825 418 NNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK------------------------ 472 (631)
Q Consensus 418 ~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~------------------------ 472 (631)
++|+..+.||+|+||.||++... ++..+|+|.+.... ......++.+|++++.+
T Consensus 1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 79 (308)
T cd06615 1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEI-KPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICME 79 (308)
T ss_pred CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEecccc-CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEee
Confidence 46888999999999999999865 58889999886542 33445678899998875
Q ss_pred ----CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC-------------------------CCcEEEeeccccccCCCC
Q 042825 473 ----GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG-------------------------DDMRVADFGLVRLVPENG 523 (631)
Q Consensus 473 ----gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g-------------------------~~~kl~DFGla~~~~~~~ 523 (631)
++|.+++.. ...+.+.....++.++++| +.+||+|||+++.....
T Consensus 80 y~~~~~L~~~l~~-----~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~- 153 (308)
T cd06615 80 HMDGGSLDQVLKK-----AGRIPENILGKISIAVLRGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS- 153 (308)
T ss_pred ccCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHhhCCEEECCCChHHEEEecCCcEEEccCCCccccccc-
Confidence 455555532 1346666666666666543 35789999999765321
Q ss_pred ccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHH--------------------
Q 042825 524 KHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIH-------------------- 583 (631)
Q Consensus 524 ~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~-------------------- 583 (631)
......|+..|+|||+..+..++.++|||||||++|||++|+.||............
T Consensus 154 ---~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (308)
T cd06615 154 ---MANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELEAMFGRPVSEGEAKESHRPVSGHP 230 (308)
T ss_pred ---ccccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchhhHHHhhcCccccccccCCcccccCCC
Confidence 223467899999999998888999999999999999999999998643221100000
Q ss_pred --------HHHHhHhhh----------cCChhHHHHHHhhcCCChhhHHhHHHHHHH
Q 042825 584 --------LATWFQKMH----------KNHDTFQMAIDKTIQLDEENLANVSTVAEL 622 (631)
Q Consensus 584 --------l~~~~~~~~----------~~~~~l~~~id~~L~~d~~~r~~~~~vl~l 622 (631)
...+..... ..+.++.+++.+|+..+|++|+++.++++.
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~ 287 (308)
T cd06615 231 PDSPRPMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKH 287 (308)
T ss_pred CCccchhhHHHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 000000000 013468899999999999999999988764
|
Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down |
| >PHA03210 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=9.7e-19 Score=193.35 Aligned_cols=206 Identities=15% Similarity=0.212 Sum_probs=126.9
Q ss_pred hcCCcccceeecCCCceEEEEEEecC--CcEEEEEEEe--------------c-CCCCHHHHHHHHHHHHHHhc------
Q 042825 416 ATNNFSEENRLGRGGVGTVYKGELKD--GTEVGVKRME--------------L-GSVTEQGIAQFESEITVLTK------ 472 (631)
Q Consensus 416 ~t~~f~~~~~iG~G~fg~Vyk~~~~~--g~~vAvK~l~--------------~-~~~~~~~~~~~~~Ei~~l~~------ 472 (631)
..++|...+.||+|+||+||+|..+. +..+++|.+. . ..........+.+|++++.+
T Consensus 146 ~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnI 225 (501)
T PHA03210 146 FLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENI 225 (501)
T ss_pred hhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCc
Confidence 45789999999999999999987642 2222222111 0 01112234568899998876
Q ss_pred ---------------------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CC
Q 042825 473 ---------------------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DD 507 (631)
Q Consensus 473 ---------------------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~ 507 (631)
+++.+++..................|+.+++.| +.
T Consensus 226 v~l~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~gIiHrDLKP~NILl~~~~~ 305 (501)
T PHA03210 226 LKIEEILRSEANTYMITQKYDFDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKKLIHRDIKLENIFLNCDGK 305 (501)
T ss_pred CcEeEEEEECCeeEEEEeccccCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCC
Confidence 222222221000001111223344566666654 46
Q ss_pred cEEEeeccccccCCCCccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCC-CCCCCCChH-HHHHH-
Q 042825 508 MRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKV-VDATHSDPE-YIIHL- 584 (631)
Q Consensus 508 ~kl~DFGla~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P-~~~~~~~~~-~~~~l- 584 (631)
+||+|||+++.+... .........||..|+|||++.+..++.++|||||||++|||++|+.+ +........ ....+
T Consensus 306 vkL~DFGla~~~~~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~~~~~~~~~~~ 384 (501)
T PHA03210 306 IVLGDFGTAMPFEKE-REAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGDGGGKPGKQLLKII 384 (501)
T ss_pred EEEEeCCCceecCcc-cccccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCccCCCCCHHHHHHHHH
Confidence 789999999876422 11223346799999999999999999999999999999999998854 432221111 11111
Q ss_pred -----------------HHHhH---------------hhhcCChhHHHHHHhhcCCChhhHHhHHHHHHH
Q 042825 585 -----------------ATWFQ---------------KMHKNHDTFQMAIDKTIQLDEENLANVSTVAEL 622 (631)
Q Consensus 585 -----------------~~~~~---------------~~~~~~~~l~~~id~~L~~d~~~r~~~~~vl~l 622 (631)
..+.. .......++.+++++||..||.+|+++.+++..
T Consensus 385 ~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~h 454 (501)
T PHA03210 385 DSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLAL 454 (501)
T ss_pred HhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHhhC
Confidence 01100 001123457788999999999999999998763
|
|
| >cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1 | Back alignment and domain information |
|---|
Probab=99.79 E-value=2.5e-18 Score=179.27 Aligned_cols=193 Identities=21% Similarity=0.330 Sum_probs=138.8
Q ss_pred CcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCC-CHHHHHHHHHHHHHHhc------------------------
Q 042825 419 NFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSV-TEQGIAQFESEITVLTK------------------------ 472 (631)
Q Consensus 419 ~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~-~~~~~~~~~~Ei~~l~~------------------------ 472 (631)
.|+..+.||+|+||.||+++.. ++..||+|++..... ......++.+|++++++
T Consensus 26 ~f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 105 (317)
T cd06635 26 LFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVME 105 (317)
T ss_pred hhhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEEe
Confidence 3667789999999999999965 588999999875422 23445678889988876
Q ss_pred ---CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCCcc
Q 042825 473 ---GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENGKH 525 (631)
Q Consensus 473 ---gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~~~ 525 (631)
|++.+.+. .....++|..+..++.+++.+ +.++|+|||+++....
T Consensus 106 ~~~g~l~~~~~----~~~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~---- 177 (317)
T cd06635 106 YCLGSASDLLE----VHKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQVKLADFGSASIASP---- 177 (317)
T ss_pred CCCCCHHHHHH----HhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcccEEECCCCCEEEecCCCccccCC----
Confidence 33333332 123458888888888888765 4578999999876531
Q ss_pred ccccccccCcccccccccc---cCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHhHhh---hcCChhHH
Q 042825 526 SILTKVAGTFGYLAPEYIV---TGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQKM---HKNHDTFQ 599 (631)
Q Consensus 526 ~~~~~~~gt~~Y~aPE~~~---~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~~~~---~~~~~~l~ 599 (631)
.....|+..|+|||++. ...++.++|||||||++|||++|+.||........ ...+....... ...++.+.
T Consensus 178 --~~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~ 254 (317)
T cd06635 178 --ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA-LYHIAQNESPTLQSNEWSDYFR 254 (317)
T ss_pred --cccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHHH-HHHHHhccCCCCCCccccHHHH
Confidence 22356889999999974 45689999999999999999999999875432211 11111110001 11235689
Q ss_pred HHHHhhcCCChhhHHhHHHHHHH
Q 042825 600 MAIDKTIQLDEENLANVSTVAEL 622 (631)
Q Consensus 600 ~~id~~L~~d~~~r~~~~~vl~l 622 (631)
+++.+|+..+|.+|+++.++++.
T Consensus 255 ~li~~~l~~~p~~Rpt~~~il~~ 277 (317)
T cd06635 255 NFVDSCLQKIPQDRPTSEELLKH 277 (317)
T ss_pred HHHHHHccCCcccCcCHHHHHhC
Confidence 99999999999999999998864
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron |
| >cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12 | Back alignment and domain information |
|---|
Probab=99.79 E-value=2.5e-18 Score=177.65 Aligned_cols=205 Identities=22% Similarity=0.309 Sum_probs=140.3
Q ss_pred hhcCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhcCCh---hH-------------
Q 042825 415 NATNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTKGTL---GR------------- 477 (631)
Q Consensus 415 ~~t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~gsL---~~------------- 477 (631)
...++|+..+.||+|+||.||+|+.+ +|+.||||+++...........+.+|++++.+-.. -.
T Consensus 4 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~ 83 (302)
T cd07864 4 RCVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALD 83 (302)
T ss_pred hhhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhh
Confidence 45678899999999999999999976 58899999997643333334567788887765110 00
Q ss_pred ---------HhHhh--------hhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccc
Q 042825 478 ---------HLFNW--------EEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLV 516 (631)
Q Consensus 478 ---------~L~~~--------~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla 516 (631)
.+.++ .......+++.....++.+++.| +.+||+|||++
T Consensus 84 ~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~~~~kl~dfg~~ 163 (302)
T cd07864 84 FKKDKGAFYLVFEYMDHDLMGLLESGLVHFSEDHIKSFMKQLLEGLNYCHKKNFLHRDIKCSNILLNNKGQIKLADFGLA 163 (302)
T ss_pred ccccCCcEEEEEcccCccHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCcEEeCccccc
Confidence 00011 11123357888888888888765 45789999999
Q ss_pred cccCCCCccccccccccCccccccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHh-------
Q 042825 517 RLVPENGKHSILTKVAGTFGYLAPEYIVT-GRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWF------- 588 (631)
Q Consensus 517 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~------- 588 (631)
+....... .......++..|+|||.+.+ ..++.++|||||||++|||++|+.||....... ....+....
T Consensus 164 ~~~~~~~~-~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 241 (302)
T cd07864 164 RLYNSEES-RPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQELA-QLELISRLCGSPCPAV 241 (302)
T ss_pred ccccCCcc-cccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHHhCCCChhh
Confidence 87642221 12233456889999998765 357899999999999999999999997543211 111111110
Q ss_pred ------------------------HhhhcCChhHHHHHHhhcCCChhhHHhHHHHHH
Q 042825 589 ------------------------QKMHKNHDTFQMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 589 ------------------------~~~~~~~~~l~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
......+..+.+++..|+..+|.+|+++.++++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~ 298 (302)
T cd07864 242 WPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALN 298 (302)
T ss_pred cccccccccccccccccccccchhhhcCCCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 000112467899999999999999999988765
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely |
| >cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9 | Back alignment and domain information |
|---|
Probab=99.79 E-value=2.7e-18 Score=177.87 Aligned_cols=204 Identities=18% Similarity=0.240 Sum_probs=136.4
Q ss_pred cCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhcCChh---H---------------
Q 042825 417 TNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTKGTLG---R--------------- 477 (631)
Q Consensus 417 t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~gsL~---~--------------- 477 (631)
.++|+..+.||+|+||.||+|+.. +++.||||++............+.+|++++.+-... .
T Consensus 11 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 90 (310)
T cd07865 11 VSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRY 90 (310)
T ss_pred hhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCC
Confidence 357889999999999999999975 589999999875433322334566788877651000 0
Q ss_pred -----H--------hHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccC
Q 042825 478 -----H--------LFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVP 520 (631)
Q Consensus 478 -----~--------L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~ 520 (631)
. +..+.......+++.....++.+++.| +.+||+|||+++...
T Consensus 91 ~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~ 170 (310)
T cd07865 91 KGSFYLVFEFCEHDLAGLLSNKNVKFTLSEIKKVMKMLLNGLYYIHRNKILHRDMKAANILITKDGILKLADFGLARAFS 170 (310)
T ss_pred CceEEEEEcCCCcCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEECCCCcEEECcCCCccccc
Confidence 0 001111122357888888888888865 457899999998764
Q ss_pred CCCcc--ccccccccCcccccccccccCC-CCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHH-----------
Q 042825 521 ENGKH--SILTKVAGTFGYLAPEYIVTGR-ITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLAT----------- 586 (631)
Q Consensus 521 ~~~~~--~~~~~~~gt~~Y~aPE~~~~~~-~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~----------- 586 (631)
..... .......++..|+|||++.+.. ++.++||||||+++|||+||+.||........ ...+..
T Consensus 171 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 249 (310)
T cd07865 171 LSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQ-LTLISQLCGSITPEVWP 249 (310)
T ss_pred CCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHHhCCCChhhcc
Confidence 22111 1223456788999999886644 78899999999999999999999975432110 000000
Q ss_pred -------H------------hHh---hhcCChhHHHHHHhhcCCChhhHHhHHHHHH
Q 042825 587 -------W------------FQK---MHKNHDTFQMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 587 -------~------------~~~---~~~~~~~l~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
| ... .......+.++|.+|+..+|.+|+++.++++
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~ 306 (310)
T cd07865 250 GVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALN 306 (310)
T ss_pred cccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhc
Confidence 0 000 0011345679999999999999999998874
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl |
| >cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15 | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.9e-18 Score=181.72 Aligned_cols=204 Identities=21% Similarity=0.255 Sum_probs=139.9
Q ss_pred hcCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhcC-ChhH---H------------
Q 042825 416 ATNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTKG-TLGR---H------------ 478 (631)
Q Consensus 416 ~t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~g-sL~~---~------------ 478 (631)
..++|+..+.||+|+||.||+|... +++.+|||++............+.+|+.++.+- +... +
T Consensus 5 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~ 84 (337)
T cd07852 5 ILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDI 84 (337)
T ss_pred hhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceE
Confidence 4567888999999999999999976 588999999865433333445677788777551 1100 0
Q ss_pred ----------hHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCCc
Q 042825 479 ----------LFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENGK 524 (631)
Q Consensus 479 ----------L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~~ 524 (631)
|..+... ..+.|..+..++.+++.| +.+||+|||+++.......
T Consensus 85 ~lv~e~~~~~L~~~~~~--~~~~~~~~~~i~~qi~~~L~~LH~~~i~H~dl~p~nill~~~~~~kl~d~g~~~~~~~~~~ 162 (337)
T cd07852 85 YLVFEYMETDLHAVIRA--NILEDVHKRYIMYQLLKALKYIHSGNVIHRDLKPSNILLNSDCRVKLADFGLARSLSELEE 162 (337)
T ss_pred EEEecccccCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEEeeccchhccccccc
Confidence 0111111 257888888888888765 4578999999987643221
Q ss_pred c---ccccccccCccccccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHh------------
Q 042825 525 H---SILTKVAGTFGYLAPEYIVT-GRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWF------------ 588 (631)
Q Consensus 525 ~---~~~~~~~gt~~Y~aPE~~~~-~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~------------ 588 (631)
. .......|+..|+|||++.+ ..++.++|||||||++|||+||+.||.+....... ..+..+.
T Consensus 163 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 241 (337)
T cd07852 163 NPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQL-EKIIEVIGPPSAEDIESIK 241 (337)
T ss_pred cccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHHH-HHHHHHhCCCCHHHHHHHH
Confidence 1 12334678999999998765 45789999999999999999999999754322111 1110000
Q ss_pred -------------------Hhhh-cCChhHHHHHHhhcCCChhhHHhHHHHHHH
Q 042825 589 -------------------QKMH-KNHDTFQMAIDKTIQLDEENLANVSTVAEL 622 (631)
Q Consensus 589 -------------------~~~~-~~~~~l~~~id~~L~~d~~~r~~~~~vl~l 622 (631)
.... ..+.++.+++.+|+..+|.+|+++.++++.
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~ 295 (337)
T cd07852 242 SPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEH 295 (337)
T ss_pred hhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhC
Confidence 0000 124578899999999999999999998865
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul |
| >cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85 | Back alignment and domain information |
|---|
Probab=99.78 E-value=3e-18 Score=175.34 Aligned_cols=198 Identities=23% Similarity=0.355 Sum_probs=139.1
Q ss_pred CcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc-------------------------
Q 042825 419 NFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK------------------------- 472 (631)
Q Consensus 419 ~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~------------------------- 472 (631)
+|+..+.||+|++|.||+|+.. +|+.||||++..... ......+.+|++++.+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 79 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAE-EGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFEY 79 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEeccccc-ccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEec
Confidence 5788899999999999999976 589999999876432 2234566778887765
Q ss_pred --CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCCccc
Q 042825 473 --GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENGKHS 526 (631)
Q Consensus 473 --gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~~~~ 526 (631)
+++.+++... .....+++.....++.+++.+ +.++++|||+++...... .
T Consensus 80 ~~~~l~~~~~~~--~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~--~ 155 (284)
T cd07836 80 MDKDLKKYMDTH--GVRGALDPNTVKSFTYQLLKGIAFCHENRVLHRDLKPQNLLINKRGELKLADFGLARAFGIPV--N 155 (284)
T ss_pred CCccHHHHHHhc--CCCCCcCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCCcEEEeecchhhhhcCCc--c
Confidence 4444444321 112457888888888888765 467899999998653211 1
Q ss_pred cccccccCcccccccccccC-CCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHH-----------------h
Q 042825 527 ILTKVAGTFGYLAPEYIVTG-RITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATW-----------------F 588 (631)
Q Consensus 527 ~~~~~~gt~~Y~aPE~~~~~-~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~-----------------~ 588 (631)
......++..|++||++.+. .++.++|||||||++|||++|+.||.+....+.....+..+ .
T Consensus 156 ~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (284)
T cd07836 156 TFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGISQLPEYK 235 (284)
T ss_pred ccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhHHHHhcCchhc
Confidence 22334678899999988654 47899999999999999999999998654322111111100 0
Q ss_pred -----------Hhh-hcCChhHHHHHHhhcCCChhhHHhHHHHHH
Q 042825 589 -----------QKM-HKNHDTFQMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 589 -----------~~~-~~~~~~l~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
... ...+..+.+++.++++.+|.+|+++.++++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~ 280 (284)
T cd07836 236 PTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQ 280 (284)
T ss_pred ccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 000 112456789999999999999999988775
|
Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. |
| >cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins | Back alignment and domain information |
|---|
Probab=99.78 E-value=2.3e-18 Score=178.56 Aligned_cols=204 Identities=21% Similarity=0.243 Sum_probs=137.3
Q ss_pred cCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhcCC---hhHHh-------------
Q 042825 417 TNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTKGT---LGRHL------------- 479 (631)
Q Consensus 417 t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~gs---L~~~L------------- 479 (631)
.++|...+.||+|+||.||+|+.. +++.+|||++............+.+|++++.+-+ +-..+
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 86 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRK 86 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheeccccccccc
Confidence 578999999999999999999966 5899999998754333223345677888776511 10000
Q ss_pred ---------------HhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccC
Q 042825 480 ---------------FNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVP 520 (631)
Q Consensus 480 ---------------~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~ 520 (631)
..........+++.....++.+++++ +.++|+|||+++...
T Consensus 87 ~~~~~lv~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~ 166 (311)
T cd07866 87 RGSVYMVTPYMDHDLSGLLENPSVKLTESQIKCYMLQLLEGINYLHENHILHRDIKAANILIDNQGILKIADFGLARPYD 166 (311)
T ss_pred CceEEEEEecCCcCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECcCccchhcc
Confidence 00011112357888888888877765 457899999998653
Q ss_pred CCCcc---------ccccccccCcccccccccccC-CCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHh--
Q 042825 521 ENGKH---------SILTKVAGTFGYLAPEYIVTG-RITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWF-- 588 (631)
Q Consensus 521 ~~~~~---------~~~~~~~gt~~Y~aPE~~~~~-~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~-- 588 (631)
..... ...+...++..|+|||.+.+. .++.++|||||||++|||++|+.||.+........ .+....
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~~~-~~~~~~~~ 245 (311)
T cd07866 167 GPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQLH-LIFKLCGT 245 (311)
T ss_pred CCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHHHH-HHHHHhCC
Confidence 22111 112335678899999987654 58999999999999999999999997543321111 111100
Q ss_pred -----------------------------HhhhcCChhHHHHHHhhcCCChhhHHhHHHHHH
Q 042825 589 -----------------------------QKMHKNHDTFQMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 589 -----------------------------~~~~~~~~~l~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
.........+.+++.+++..+|.+|+++.+++.
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~ 307 (311)
T cd07866 246 PTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALE 307 (311)
T ss_pred CChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhc
Confidence 000111246789999999999999999988764
|
Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic |
| >cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7 | Back alignment and domain information |
|---|
Probab=99.78 E-value=2.6e-18 Score=177.17 Aligned_cols=197 Identities=21% Similarity=0.316 Sum_probs=137.1
Q ss_pred cCCcccceeecCCCceEEEEEEecC-CcEEEEEEEecCCCCHHHHHHHHHHHHHHhc-----------------------
Q 042825 417 TNNFSEENRLGRGGVGTVYKGELKD-GTEVGVKRMELGSVTEQGIAQFESEITVLTK----------------------- 472 (631)
Q Consensus 417 t~~f~~~~~iG~G~fg~Vyk~~~~~-g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~----------------------- 472 (631)
.++|+..+.||+|+||.||+|..++ ++.||||++...... ....++..|+.++.+
T Consensus 14 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~-~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~v 92 (296)
T cd06618 14 LNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNK-EENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFIC 92 (296)
T ss_pred cchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCCh-HHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEEE
Confidence 3567888999999999999999875 899999999764332 234556667665543
Q ss_pred -----CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC-------------------------CCcEEEeeccccccCCC
Q 042825 473 -----GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG-------------------------DDMRVADFGLVRLVPEN 522 (631)
Q Consensus 473 -----gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g-------------------------~~~kl~DFGla~~~~~~ 522 (631)
+++.... ......+++..+..|+.++++| +.+||+|||+++.+...
T Consensus 93 ~e~~~~~l~~l~----~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~i~H~dl~p~nill~~~~~~kL~dfg~~~~~~~~ 168 (296)
T cd06618 93 MELMSTCLDKLL----KRIQGPIPEDILGKMTVAIVKALHYLKEKHGVIHRDVKPSNILLDASGNVKLCDFGISGRLVDS 168 (296)
T ss_pred eeccCcCHHHHH----HHhcCCCCHHHHHHHHHHHHHHHHHHHhhCCEecCCCcHHHEEEcCCCCEEECccccchhccCC
Confidence 1111111 1112367888888888777755 35789999999866322
Q ss_pred CccccccccccCcccccccccccCC----CCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHhHhh---h---
Q 042825 523 GKHSILTKVAGTFGYLAPEYIVTGR----ITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQKM---H--- 592 (631)
Q Consensus 523 ~~~~~~~~~~gt~~Y~aPE~~~~~~----~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~~~~---~--- 592 (631)
. ......++..|+|||++.+.. ++.++||||||+++|||++|+.||...... ...+....... .
T Consensus 169 ~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~---~~~~~~~~~~~~~~~~~~ 242 (296)
T cd06618 169 K---AKTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTE---FEVLTKILQEEPPSLPPN 242 (296)
T ss_pred C---cccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhH---HHHHHHHhcCCCCCCCCC
Confidence 1 123345788999999987554 889999999999999999999999753221 11122221111 1
Q ss_pred -cCChhHHHHHHhhcCCChhhHHhHHHHHHHHH
Q 042825 593 -KNHDTFQMAIDKTIQLDEENLANVSTVAELGD 624 (631)
Q Consensus 593 -~~~~~l~~~id~~L~~d~~~r~~~~~vl~lal 624 (631)
....++.+++.+|+..+|.+||++.++++.-+
T Consensus 243 ~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~~ 275 (296)
T cd06618 243 EGFSPDFCSFVDLCLTKDHRKRPKYRELLQHPF 275 (296)
T ss_pred CCCCHHHHHHHHHHccCChhhCCCHHHHhcChh
Confidence 12457899999999999999999998876543
|
Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it |
| >cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase | Back alignment and domain information |
|---|
Probab=99.78 E-value=2.5e-18 Score=172.62 Aligned_cols=197 Identities=19% Similarity=0.326 Sum_probs=146.9
Q ss_pred CcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc-------------------------
Q 042825 419 NFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK------------------------- 472 (631)
Q Consensus 419 ~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~------------------------- 472 (631)
+|+..+.||+|+||.||++... ++..||+|++..........+++.+|++++.+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e~ 80 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEY 80 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEEe
Confidence 4778899999999999999976 58999999998765544566778889887765
Q ss_pred ---CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCCcc
Q 042825 473 ---GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENGKH 525 (631)
Q Consensus 473 ---gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~~~ 525 (631)
++|.+++.... .....+++.....++.+++.| +.++|+|||++.......
T Consensus 81 ~~~~~L~~~l~~~~-~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~-- 157 (258)
T cd08215 81 ADGGDLSQKIKKQK-KEGKPFPEEQILDWFVQLCLALKYLHSRKILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTV-- 157 (258)
T ss_pred cCCCcHHHHHHHhh-ccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecccCChHHeEEcCCCcEEECCccceeecccCc--
Confidence 35555554321 113568888888888888775 457899999998764221
Q ss_pred ccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHhHh-----hhcCChhHHH
Q 042825 526 SILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQK-----MHKNHDTFQM 600 (631)
Q Consensus 526 ~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~~~-----~~~~~~~l~~ 600 (631)
.......|+..|+|||......++.++||||+|++++||++|+.||+...... ........ ......++.+
T Consensus 158 ~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 233 (258)
T cd08215 158 DLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENLLE----LALKILKGQYPPIPSQYSSELRN 233 (258)
T ss_pred ceecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcHHH----HHHHHhcCCCCCCCCCCCHHHHH
Confidence 12334578899999999988889999999999999999999999997543211 11111111 0122467899
Q ss_pred HHHhhcCCChhhHHhHHHHHHH
Q 042825 601 AIDKTIQLDEENLANVSTVAEL 622 (631)
Q Consensus 601 ~id~~L~~d~~~r~~~~~vl~l 622 (631)
++..|+..+|.+|+++.++++.
T Consensus 234 ~i~~~l~~~p~~Rp~~~~ll~~ 255 (258)
T cd08215 234 LVSSLLQKDPEERPSIAQILQS 255 (258)
T ss_pred HHHHHcCCChhhCcCHHHHhcC
Confidence 9999999999999999998764
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They |
| >cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.78 E-value=3.2e-18 Score=175.09 Aligned_cols=196 Identities=22% Similarity=0.330 Sum_probs=137.2
Q ss_pred cccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc--------------------------
Q 042825 420 FSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK-------------------------- 472 (631)
Q Consensus 420 f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~-------------------------- 472 (631)
|+..+.||+|+||.||+|+.. +++.+|+|++............+.+|++++.+
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e 80 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFE 80 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEec
Confidence 567789999999999999976 48999999998654233344668888888765
Q ss_pred ---CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCCcc
Q 042825 473 ---GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENGKH 525 (631)
Q Consensus 473 ---gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~~~ 525 (631)
+++.+++ ......+++.....++.++++| +.+||+|||+++...... .
T Consensus 81 ~~~~~l~~~~----~~~~~~~~~~~~~~i~~~i~~al~~LH~~~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~-~ 155 (287)
T cd07840 81 YMDHDLTGLL----DSPEVKFTESQIKCYMKQLLEGLQYLHSNGILHRDIKGSNILINNDGVLKLADFGLARPYTKRN-S 155 (287)
T ss_pred cccccHHHHH----hccCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEEcCCCCEEEccccceeeccCCC-c
Confidence 1111111 1122467888888888888765 467899999998764222 1
Q ss_pred ccccccccCccccccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHH---------H--------
Q 042825 526 SILTKVAGTFGYLAPEYIVT-GRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLAT---------W-------- 587 (631)
Q Consensus 526 ~~~~~~~gt~~Y~aPE~~~~-~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~---------~-------- 587 (631)
...+...++..|+|||.+.+ ..++.++||||||+++|||+||+.||+...... ....+.. |
T Consensus 156 ~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (287)
T cd07840 156 ADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELE-QLEKIFELCGSPTDENWPGVSKLPW 234 (287)
T ss_pred ccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHHhCCCchhhccccccchh
Confidence 12234567889999998765 458999999999999999999999997544221 1111111 0
Q ss_pred -------------hHhhhc--CChhHHHHHHhhcCCChhhHHhHHHHHH
Q 042825 588 -------------FQKMHK--NHDTFQMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 588 -------------~~~~~~--~~~~l~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
...... .+..+.+++.+|+..+|.+|+++.++++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~ 283 (287)
T cd07840 235 FENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQ 283 (287)
T ss_pred hhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 000111 1467889999999999999999998765
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po |
| >cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=99.78 E-value=3.8e-18 Score=174.85 Aligned_cols=196 Identities=22% Similarity=0.348 Sum_probs=138.1
Q ss_pred CCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc------------------------
Q 042825 418 NNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK------------------------ 472 (631)
Q Consensus 418 ~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~------------------------ 472 (631)
++|+..+.||+|+||.||+++.. +++.||+|.+... .......++.+|++++.+
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~-~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e 79 (286)
T cd06622 1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLE-LDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCME 79 (286)
T ss_pred ChhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecc-cCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEe
Confidence 36788899999999999999976 6899999998754 234455778899888765
Q ss_pred ----CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC-------------------------CCcEEEeeccccccCCCC
Q 042825 473 ----GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG-------------------------DDMRVADFGLVRLVPENG 523 (631)
Q Consensus 473 ----gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g-------------------------~~~kl~DFGla~~~~~~~ 523 (631)
+++..++.. ......+++.....++.+++.+ +.++|+|||+++.....
T Consensus 80 ~~~~~~l~~~~~~--~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~- 156 (286)
T cd06622 80 YMDAGSLDKLYAG--GVATEGIPEDVLRRITYAVVKGLKFLKEEHNIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVAS- 156 (286)
T ss_pred ecCCCCHHHHHHh--ccccCCCCHHHHHHHHHHHHHHHHHHHhcCCEeeCCCCHHHEEECCCCCEEEeecCCcccccCC-
Confidence 344333321 0112367888877777666543 35789999999765321
Q ss_pred ccccccccccCcccccccccccC------CCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHhH-----hhh
Q 042825 524 KHSILTKVAGTFGYLAPEYIVTG------RITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQ-----KMH 592 (631)
Q Consensus 524 ~~~~~~~~~gt~~Y~aPE~~~~~------~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~~-----~~~ 592 (631)
......++..|+|||++.+. .++.++|||||||++|||++|+.||....... ....+..... ...
T Consensus 157 ---~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~ 232 (286)
T cd06622 157 ---LAKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYAN-IFAQLSAIVDGDPPTLPS 232 (286)
T ss_pred ---ccccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhh-HHHHHHHHhhcCCCCCCc
Confidence 12335688899999998544 35889999999999999999999997543221 1111111111 011
Q ss_pred cCChhHHHHHHhhcCCChhhHHhHHHHHH
Q 042825 593 KNHDTFQMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 593 ~~~~~l~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
..++++.+++.+++..+|..|+++.++++
T Consensus 233 ~~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 261 (286)
T cd06622 233 GYSDDAQDFVAKCLNKIPNRRPTYAQLLE 261 (286)
T ss_pred ccCHHHHHHHHHHcccCcccCCCHHHHhc
Confidence 12467899999999999999999998875
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases | Back alignment and domain information |
|---|
Probab=99.78 E-value=2e-18 Score=175.25 Aligned_cols=195 Identities=21% Similarity=0.236 Sum_probs=128.2
Q ss_pred eecCCCceEEEEEEecC---CcEEEEEEEecCCCCHHHHHHHHHHHHHHhc----------------------------C
Q 042825 425 RLGRGGVGTVYKGELKD---GTEVGVKRMELGSVTEQGIAQFESEITVLTK----------------------------G 473 (631)
Q Consensus 425 ~iG~G~fg~Vyk~~~~~---g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~----------------------------g 473 (631)
.||+|+||.||+|+..+ ...+|+|.+.... .......|.+|+++++. |
T Consensus 2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~g 80 (269)
T cd05042 2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRASA-TPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPLG 80 (269)
T ss_pred cCCccCCceEEEEEEecCCCCeEEEEeecCccC-ChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCCC
Confidence 58999999999997543 4578888876432 33445678889887754 6
Q ss_pred ChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCCcccccc
Q 042825 474 TLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENGKHSILT 529 (631)
Q Consensus 474 sL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~~~~~~~ 529 (631)
+|.+++...........++.....++.+++.| +.+||+|||+++............
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~ 160 (269)
T cd05042 81 DLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQADFIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYYITKD 160 (269)
T ss_pred cHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcCEecccccHhheEecCCCcEEEeccccccccccchheeccC
Confidence 77777754222212334566667777777765 457899999997653222111223
Q ss_pred ccccCccccccccccc-------CCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChHHHHHHHHHhH-----hh--hcC
Q 042825 530 KVAGTFGYLAPEYIVT-------GRITAKVDVYSFGMILMDLIT-GRKVVDATHSDPEYIIHLATWFQ-----KM--HKN 594 (631)
Q Consensus 530 ~~~gt~~Y~aPE~~~~-------~~~~~k~DVwS~GvvL~Ellt-G~~P~~~~~~~~~~~~~l~~~~~-----~~--~~~ 594 (631)
...++..|+|||+... ..++.++|||||||++|||++ |+.||....... .......... .. ...
T Consensus 161 ~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 239 (269)
T cd05042 161 CHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQ-VLKQVVREQDIKLPKPQLDLKY 239 (269)
T ss_pred CCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHH-HHHHHhhccCccCCCCcccccC
Confidence 3456788999998743 357889999999999999999 788886543211 1111111110 00 012
Q ss_pred ChhHHHHHHhhcCCChhhHHhHHHHHHH
Q 042825 595 HDTFQMAIDKTIQLDEENLANVSTVAEL 622 (631)
Q Consensus 595 ~~~l~~~id~~L~~d~~~r~~~~~vl~l 622 (631)
+..+.+++..++ .||++|+++.+++++
T Consensus 240 ~~~~~~~~~~~~-~dp~~Rpt~~~v~~~ 266 (269)
T cd05042 240 SDRWYEVMQFCW-LDPETRPTAEEVHEL 266 (269)
T ss_pred CHHHHHHHHHHh-cCcccccCHHHHHHH
Confidence 345677888777 599999999999876
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina |
| >cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase | Back alignment and domain information |
|---|
Probab=99.78 E-value=2.9e-18 Score=175.13 Aligned_cols=194 Identities=18% Similarity=0.230 Sum_probs=133.9
Q ss_pred cccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc--------------------------
Q 042825 420 FSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK-------------------------- 472 (631)
Q Consensus 420 f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~-------------------------- 472 (631)
|...+.||+|+||.||+|+.. +++.||+|+++...... ......+|+.++.+
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~-~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~ 79 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSL-EQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVF 79 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCc-hhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEE
Confidence 456789999999999999865 58999999987543222 22334567766654
Q ss_pred ----CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC-----------------------CCcEEEeeccccccCCCCcc
Q 042825 473 ----GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG-----------------------DDMRVADFGLVRLVPENGKH 525 (631)
Q Consensus 473 ----gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g-----------------------~~~kl~DFGla~~~~~~~~~ 525 (631)
|++.+++. .....++|.....++.+++.| +.+||+|||+++.+....
T Consensus 80 e~~~~~l~~~l~----~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~p~ni~l~~~~~kl~dfg~~~~~~~~~-- 153 (282)
T cd07831 80 ELMDMNLYELIK----GRKRPLPEKRVKSYMYQLLKSLDHMHRNGIFHRDIKPENILIKDDILKLADFGSCRGIYSKP-- 153 (282)
T ss_pred ecCCccHHHHHH----hccCCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEcCCCeEEEecccccccccCC--
Confidence 22222221 122468898888888888876 357899999998764221
Q ss_pred ccccccccCccccccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHh----------------
Q 042825 526 SILTKVAGTFGYLAPEYIVT-GRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWF---------------- 588 (631)
Q Consensus 526 ~~~~~~~gt~~Y~aPE~~~~-~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~---------------- 588 (631)
......++..|+|||+... ..++.++|||||||++|||++|+.||......+. ...+....
T Consensus 154 -~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 231 (282)
T cd07831 154 -PYTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQ-IAKIHDVLGTPDAEVLKKFRKSRH 231 (282)
T ss_pred -CcCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHH-HHHHHHHcCCCCHHHHHhhccccc
Confidence 1233568899999997654 4578899999999999999999999976432211 11111100
Q ss_pred -------------Hh-hhcCChhHHHHHHhhcCCChhhHHhHHHHHHH
Q 042825 589 -------------QK-MHKNHDTFQMAIDKTIQLDEENLANVSTVAEL 622 (631)
Q Consensus 589 -------------~~-~~~~~~~l~~~id~~L~~d~~~r~~~~~vl~l 622 (631)
.. ....+.++.+++.+|+..+|++|+++.++++.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~ 279 (282)
T cd07831 232 MNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALRH 279 (282)
T ss_pred ccccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhhC
Confidence 00 01124678999999999999999999988753
|
Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. |
| >KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.78 E-value=1e-18 Score=196.45 Aligned_cols=202 Identities=25% Similarity=0.319 Sum_probs=147.3
Q ss_pred hcCCcccceeecCCCceEEEEEEec----C----CcEEEEEEEecCCCCHHHHHHHHHHHHHHhc---------------
Q 042825 416 ATNNFSEENRLGRGGVGTVYKGELK----D----GTEVGVKRMELGSVTEQGIAQFESEITVLTK--------------- 472 (631)
Q Consensus 416 ~t~~f~~~~~iG~G~fg~Vyk~~~~----~----g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~--------------- 472 (631)
..++....+.+|+|+||.|++|... . ...||||.++..... .+.+.+..|+++|..
T Consensus 294 ~~~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~-~~~~~~~~El~~m~~~g~H~niv~llG~~t 372 (609)
T KOG0200|consen 294 PRENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASS-SEKKDLMSELNVLKELGKHPNIVNLLGACT 372 (609)
T ss_pred chhhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCc-HHHHHHHHHHHHHHHhcCCcchhhheeeec
Confidence 3344455569999999999999854 1 357999999876544 677899999999876
Q ss_pred --------------CChhHHhHhhh---h-c-----CC--CCCCHHHHHHHHHHhhcC----------------------
Q 042825 473 --------------GTLGRHLFNWE---E-E-----GL--EPLEWNTRLNIALDVARG---------------------- 505 (631)
Q Consensus 473 --------------gsL~~~L~~~~---~-~-----~~--~~L~~~~~~~I~~~ia~g---------------------- 505 (631)
|+|..+|.... . . .. ..|.....+.++.|||+|
T Consensus 373 ~~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~~vHRDLAaRNVLi~ 452 (609)
T KOG0200|consen 373 QDGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASVPCVHRDLAARNVLIT 452 (609)
T ss_pred cCCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhCCccchhhhhhhEEec
Confidence 88888886533 0 0 01 248899999999999998
Q ss_pred --CCcEEEeeccccccCCCCccccccccc--cCcccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChHH
Q 042825 506 --DDMRVADFGLVRLVPENGKHSILTKVA--GTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT-GRKVVDATHSDPEY 580 (631)
Q Consensus 506 --~~~kl~DFGla~~~~~~~~~~~~~~~~--gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~Ellt-G~~P~~~~~~~~~~ 580 (631)
..+||+|||+||......... ..... -+..|||||.+....|+.|+|||||||+|||++| |..|+.+....+.
T Consensus 453 ~~~~~kIaDFGlar~~~~~~~y~-~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~~~~~- 530 (609)
T KOG0200|consen 453 KNKVIKIADFGLARDHYNKDYYR-TKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGIPPTEE- 530 (609)
T ss_pred CCCEEEEccccceeccCCCCceE-ecCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCCCcHHH-
Confidence 346899999999764333222 12222 3567999999999999999999999999999999 8999976432221
Q ss_pred HHHHHHHhHhh------hcCChhHHHHHHhhcCCChhhHHhHHHHHHHH
Q 042825 581 IIHLATWFQKM------HKNHDTFQMAIDKTIQLDEENLANVSTVAELG 623 (631)
Q Consensus 581 ~~~l~~~~~~~------~~~~~~l~~~id~~L~~d~~~r~~~~~vl~la 623 (631)
+.++.+.. ..-.+++-++...|+..+|++||+..++.+..
T Consensus 531 ---l~~~l~~G~r~~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~~~ 576 (609)
T KOG0200|consen 531 ---LLEFLKEGNRMEQPEHCSDEIYDLMKSCWNADPEDRPTFSECVEFF 576 (609)
T ss_pred ---HHHHHhcCCCCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHH
Confidence 22233322 11245777888999999999999998876643
|
|
| >cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1 | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.8e-18 Score=174.38 Aligned_cols=194 Identities=17% Similarity=0.204 Sum_probs=140.8
Q ss_pred CcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCC-HHHHHHHHHHHHHHhc------------------------
Q 042825 419 NFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVT-EQGIAQFESEITVLTK------------------------ 472 (631)
Q Consensus 419 ~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~-~~~~~~~~~Ei~~l~~------------------------ 472 (631)
+|+..+.||.|+||.||+|+.. +++.||+|.+...... ....+.+.+|++++++
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 80 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVD 80 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEe
Confidence 4788899999999999999976 5899999999764332 2456788899888765
Q ss_pred ----CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCCc
Q 042825 473 ----GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENGK 524 (631)
Q Consensus 473 ----gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~~ 524 (631)
++|.+++.. ...+.......++.+++++ +.++|+|||++.......
T Consensus 81 ~~~~~~L~~~l~~-----~~~l~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~- 154 (258)
T cd05578 81 LLLGGDLRYHLSQ-----KVKFSEEQVKFWICEIVLALEYLHSKGIIHRDIKPDNILLDEQGHVHITDFNIATKVTPDT- 154 (258)
T ss_pred CCCCCCHHHHHHh-----cCCcCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEEcCCCCEEEeecccccccCCCc-
Confidence 334333321 1357777777887777765 467899999998764221
Q ss_pred cccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHH-HHHHH-HhHh-hhcCChhHHHH
Q 042825 525 HSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYI-IHLAT-WFQK-MHKNHDTFQMA 601 (631)
Q Consensus 525 ~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~-~~l~~-~~~~-~~~~~~~l~~~ 601 (631)
......|+..|+|||+..+..++.++||||||+++|||++|+.||.......... ..... .... ....+.++.++
T Consensus 155 --~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (258)
T cd05578 155 --LTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQIRAKQETADVLYPATWSTEAIDA 232 (258)
T ss_pred --cccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCccHHHHHHHHhccccccCcccCcHHHHHH
Confidence 2234568899999999988889999999999999999999999998654321111 11111 1111 11124688999
Q ss_pred HHhhcCCChhhHHhH--HHHH
Q 042825 602 IDKTIQLDEENLANV--STVA 620 (631)
Q Consensus 602 id~~L~~d~~~r~~~--~~vl 620 (631)
+.+|+..+|.+|++. .+++
T Consensus 233 i~~~l~~~p~~R~~~~~~~l~ 253 (258)
T cd05578 233 INKLLERDPQKRLGDNLKDLK 253 (258)
T ss_pred HHHHccCChhHcCCccHHHHh
Confidence 999999999999998 6654
|
Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. |
| >cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Probab=99.78 E-value=2.3e-18 Score=175.97 Aligned_cols=200 Identities=21% Similarity=0.323 Sum_probs=141.6
Q ss_pred CcccceeecCCCceEEEEEEec-----CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc---------------------
Q 042825 419 NFSEENRLGRGGVGTVYKGELK-----DGTEVGVKRMELGSVTEQGIAQFESEITVLTK--------------------- 472 (631)
Q Consensus 419 ~f~~~~~iG~G~fg~Vyk~~~~-----~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~--------------------- 472 (631)
.|...+.||+|+||.||++++. ++..||||.+...... ...++|.+|++++++
T Consensus 5 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~-~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~ 83 (284)
T cd05038 5 HLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEE-QHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSL 83 (284)
T ss_pred hchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccch-HHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCce
Confidence 4667789999999999999864 3679999999765432 356789999988765
Q ss_pred ---------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeecccccc
Q 042825 473 ---------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLV 519 (631)
Q Consensus 473 ---------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~ 519 (631)
+++.+++. .....++|.....++.+++.+ ..++|+|||+++..
T Consensus 84 ~lv~e~~~~~~l~~~l~----~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~ 159 (284)
T cd05038 84 RLIMEYLPSGSLRDYLQ----RHRDQINLKRLLLFSSQICKGMDYLGSQRYIHRDLAARNILVESEDLVKISDFGLAKVL 159 (284)
T ss_pred EEEEecCCCCCHHHHHH----hCccccCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCCCEEEccccccccc
Confidence 33333332 112358888888888887765 45789999999877
Q ss_pred CCCCcc-ccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChH----------HHHHHHHHh
Q 042825 520 PENGKH-SILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPE----------YIIHLATWF 588 (631)
Q Consensus 520 ~~~~~~-~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~----------~~~~l~~~~ 588 (631)
...... .......++..|+|||+.....++.++||||||+++|||+||+.|+........ ....+..+.
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (284)
T cd05038 160 PEDKDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLLELL 239 (284)
T ss_pred ccCCcceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhccccccccccccHHHHHHHH
Confidence 422211 111223456679999999888899999999999999999999999865432210 012222222
Q ss_pred Hhh------hcCChhHHHHHHhhcCCChhhHHhHHHHHHHH
Q 042825 589 QKM------HKNHDTFQMAIDKTIQLDEENLANVSTVAELG 623 (631)
Q Consensus 589 ~~~------~~~~~~l~~~id~~L~~d~~~r~~~~~vl~la 623 (631)
... .....++.+++.+|+..+|.+|+++.++++..
T Consensus 240 ~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l 280 (284)
T cd05038 240 KEGERLPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLILIV 280 (284)
T ss_pred HcCCcCCCCccCCHHHHHHHHHHhccChhhCCCHHHHHHHH
Confidence 211 11135788999999999999999999988753
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut |
| >cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Probab=99.78 E-value=3e-18 Score=173.66 Aligned_cols=197 Identities=19% Similarity=0.332 Sum_probs=140.1
Q ss_pred CcccceeecCCCceEEEEEEe-cCCcEEEEEEEecCCCC----HHHHHHHHHHHHHHhc---------------------
Q 042825 419 NFSEENRLGRGGVGTVYKGEL-KDGTEVGVKRMELGSVT----EQGIAQFESEITVLTK--------------------- 472 (631)
Q Consensus 419 ~f~~~~~iG~G~fg~Vyk~~~-~~g~~vAvK~l~~~~~~----~~~~~~~~~Ei~~l~~--------------------- 472 (631)
+|+..+.||+|+||.||++.. .+++.||+|.+...... ....+++.+|++++++
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 80 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNL 80 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEE
Confidence 477889999999999999985 46899999998754321 1235678899988865
Q ss_pred -------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC-------------------------CCcEEEeeccccccC
Q 042825 473 -------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG-------------------------DDMRVADFGLVRLVP 520 (631)
Q Consensus 473 -------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g-------------------------~~~kl~DFGla~~~~ 520 (631)
++|.+++.. ...+++.....++.+++.| ..+||+|||.++...
T Consensus 81 v~e~~~~~~L~~~l~~-----~~~~~~~~~~~~~~ql~~al~~LH~~~i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~~ 155 (268)
T cd06630 81 FVEWMAGGSVSHLLSK-----YGAFKEAVIINYTEQLLRGLSYLHENQIIHRDVKGANLLIDSTGQRLRIADFGAAARLA 155 (268)
T ss_pred EEeccCCCcHHHHHHH-----hCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEcccccccccc
Confidence 455555432 2357777778888777765 237899999998764
Q ss_pred CCCcc--ccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHhHh----hh--
Q 042825 521 ENGKH--SILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQK----MH-- 592 (631)
Q Consensus 521 ~~~~~--~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~~~----~~-- 592 (631)
..... .......|+..|+|||.+.+..++.++||||+|+++|||++|+.||......... ..+...... ..
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 234 (268)
T cd06630 156 AKGTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHL-ALIFKIASATTAPSIPE 234 (268)
T ss_pred cccccCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcchH-HHHHHHhccCCCCCCch
Confidence 22111 1122356889999999998888999999999999999999999999743322111 111111100 00
Q ss_pred cCChhHHHHHHhhcCCChhhHHhHHHHHH
Q 042825 593 KNHDTFQMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 593 ~~~~~l~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
..+.++.+++.+++..+|.+|+++.++++
T Consensus 235 ~~~~~~~~~i~~~l~~~p~~R~~~~~ll~ 263 (268)
T cd06630 235 HLSPGLRDVTLRCLELQPEDRPPSRELLK 263 (268)
T ss_pred hhCHHHHHHHHHHcCCCcccCcCHHHHhc
Confidence 12367889999999999999999998764
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their |
| >cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.78 E-value=2.8e-18 Score=178.41 Aligned_cols=203 Identities=22% Similarity=0.289 Sum_probs=135.0
Q ss_pred CcccceeecCCCceEEEEEEec---CCcEEEEEEEecCCC-CHHHHHHHHHHHHHHhc----------------------
Q 042825 419 NFSEENRLGRGGVGTVYKGELK---DGTEVGVKRMELGSV-TEQGIAQFESEITVLTK---------------------- 472 (631)
Q Consensus 419 ~f~~~~~iG~G~fg~Vyk~~~~---~g~~vAvK~l~~~~~-~~~~~~~~~~Ei~~l~~---------------------- 472 (631)
+|+..+.||+|+||.||+|+.. +++.||+|.+..... .....+.+.+|++++.+
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 80 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVY 80 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEE
Confidence 4777899999999999999965 478999999976321 11223556778877765
Q ss_pred -------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC----------------------------CCcEEEeecccc
Q 042825 473 -------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG----------------------------DDMRVADFGLVR 517 (631)
Q Consensus 473 -------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g----------------------------~~~kl~DFGla~ 517 (631)
+++.+.+..........+.......|+.+++.| +.+||+|||+++
T Consensus 81 lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg~~~ 160 (316)
T cd07842 81 LLFDYAEHDLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNWVLHRDLKPANILVMGEGPERGVVKIGDLGLAR 160 (316)
T ss_pred EEEeCCCcCHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEEcCCCCccceEEECCCcccc
Confidence 222332221111112245666666777776654 347899999998
Q ss_pred ccCCCCc-cccccccccCcccccccccccC-CCCchhhHHHHHHHHHHHHcCCCCCCCCCCCh-----HHHHH-------
Q 042825 518 LVPENGK-HSILTKVAGTFGYLAPEYIVTG-RITAKVDVYSFGMILMDLITGRKVVDATHSDP-----EYIIH------- 583 (631)
Q Consensus 518 ~~~~~~~-~~~~~~~~gt~~Y~aPE~~~~~-~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~-----~~~~~------- 583 (631)
....... ........++..|+|||++.+. .++.++|||||||++|||++|+.||....... .....
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (316)
T cd07842 161 LFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLERIFEV 240 (316)
T ss_pred ccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHHHHHHHH
Confidence 7642221 1122345788999999988664 58999999999999999999999997543321 00000
Q ss_pred ----------------------------------HHHHhHhhhcCChhHHHHHHhhcCCChhhHHhHHHHHH
Q 042825 584 ----------------------------------LATWFQKMHKNHDTFQMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 584 ----------------------------------l~~~~~~~~~~~~~l~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
+..|+......+.++.+++.+++..||++|+++.++++
T Consensus 241 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~ 312 (316)
T cd07842 241 LGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALE 312 (316)
T ss_pred hCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 01111111123456889999999999999999988764
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the |
| >cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.6e-18 Score=176.65 Aligned_cols=195 Identities=18% Similarity=0.359 Sum_probs=137.6
Q ss_pred CcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc-------------------------
Q 042825 419 NFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK------------------------- 472 (631)
Q Consensus 419 ~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~------------------------- 472 (631)
.|+..+.||+|+||.||+|... +++.||+|.+.... ......++.+|++++++
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~-~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv 80 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDT-PDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWII 80 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCC-CchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEE
Confidence 4677889999999999999964 68999999986543 23345677788777654
Q ss_pred ------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCC
Q 042825 473 ------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPEN 522 (631)
Q Consensus 473 ------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~ 522 (631)
++|.+++. . ..+++.....++.+++.+ +.++|+|||+++.....
T Consensus 81 ~e~~~~~~L~~~~~----~--~~l~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~ 154 (277)
T cd06917 81 MEYAEGGSVRTLMK----A--GPIAEKYISVIIREVLVALKYIHKVGVIHRDIKAANILVTNTGNVKLCDFGVAALLNQN 154 (277)
T ss_pred EecCCCCcHHHHHH----c--cCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHHEEEcCCCCEEEccCCceeecCCC
Confidence 33333332 1 257788777777777665 45789999999876432
Q ss_pred CccccccccccCcccccccccccC-CCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHH-hHhhh--cCChhH
Q 042825 523 GKHSILTKVAGTFGYLAPEYIVTG-RITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATW-FQKMH--KNHDTF 598 (631)
Q Consensus 523 ~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~-~~~~~--~~~~~l 598 (631)
. .......|+..|+|||++.++ .++.++|||||||++|||++|+.||........ ...+... ..... ....++
T Consensus 155 ~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 231 (277)
T cd06917 155 S--SKRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFRA-MMLIPKSKPPRLEDNGYSKLL 231 (277)
T ss_pred c--cccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhhh-hhccccCCCCCCCcccCCHHH
Confidence 2 223345789999999988654 478999999999999999999999975432211 1111000 00111 123578
Q ss_pred HHHHHhhcCCChhhHHhHHHHHHHH
Q 042825 599 QMAIDKTIQLDEENLANVSTVAELG 623 (631)
Q Consensus 599 ~~~id~~L~~d~~~r~~~~~vl~la 623 (631)
.+++..|+..+|++|+++.++++..
T Consensus 232 ~~~i~~~l~~~p~~R~~~~~il~~~ 256 (277)
T cd06917 232 REFVAACLDEEPKERLSAEELLKSK 256 (277)
T ss_pred HHHHHHHcCCCcccCcCHHHHhhCh
Confidence 9999999999999999999887643
|
Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent |
| >cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3 | Back alignment and domain information |
|---|
Probab=99.78 E-value=3.7e-18 Score=174.23 Aligned_cols=192 Identities=21% Similarity=0.355 Sum_probs=138.2
Q ss_pred cccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc--------------------------
Q 042825 420 FSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK-------------------------- 472 (631)
Q Consensus 420 f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~-------------------------- 472 (631)
|+..+.||+|+||.||+|... ++..||+|.+..... ....+.+.+|+.++.+
T Consensus 6 ~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 84 (277)
T cd06641 6 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEA-EDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYL 84 (277)
T ss_pred hhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccc-hHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEeC
Confidence 567789999999999999865 688999998865432 3345678889888766
Q ss_pred --CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCCccc
Q 042825 473 --GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENGKHS 526 (631)
Q Consensus 473 --gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~~~~ 526 (631)
+++.+++. ...+++.....++.+++.+ +.++|+|||+++.+... ..
T Consensus 85 ~~~~l~~~i~------~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~--~~ 156 (277)
T cd06641 85 GGGSALDLLE------PGPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDT--QI 156 (277)
T ss_pred CCCcHHHHHh------cCCCCHHHHHHHHHHHHHHHHHHccCCeecCCCCHHhEEECCCCCEEEeecccceecccc--hh
Confidence 34444332 1357788888888777654 45789999999876421 11
Q ss_pred cccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHhHhhh--cCChhHHHHHHh
Q 042825 527 ILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQKMH--KNHDTFQMAIDK 604 (631)
Q Consensus 527 ~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~~~~~--~~~~~l~~~id~ 604 (631)
......++..|+|||+..+..++.++|||||||++|||++|+.||........ ...+........ ....++.+++..
T Consensus 157 ~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~ 235 (277)
T cd06641 157 KRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPMKV-LFLIPKNNPPTLEGNYSKPLKEFVEA 235 (277)
T ss_pred hhccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchHHH-HHHHhcCCCCCCCcccCHHHHHHHHH
Confidence 22345688999999999888899999999999999999999999975432110 111111000001 123578999999
Q ss_pred hcCCChhhHHhHHHHHH
Q 042825 605 TIQLDEENLANVSTVAE 621 (631)
Q Consensus 605 ~L~~d~~~r~~~~~vl~ 621 (631)
++..+|..|+++.++++
T Consensus 236 ~l~~~p~~Rp~~~~~l~ 252 (277)
T cd06641 236 CLNKEPSFRPTAKELLK 252 (277)
T ss_pred HccCChhhCcCHHHHHh
Confidence 99999999999999876
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int |
| >KOG0584 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.3e-19 Score=191.27 Aligned_cols=189 Identities=21% Similarity=0.343 Sum_probs=137.8
Q ss_pred ceeecCCCceEEEEEEec-CCcEEEEEEEecCCC--CHHHHHHHHHHHHHHhc---------------------------
Q 042825 423 ENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSV--TEQGIAQFESEITVLTK--------------------------- 472 (631)
Q Consensus 423 ~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~--~~~~~~~~~~Ei~~l~~--------------------------- 472 (631)
..+||+|+|-+||||... +|..||--.++.... .+...++|..|+++|+.
T Consensus 45 ~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iTEL 124 (632)
T KOG0584|consen 45 DEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFITEL 124 (632)
T ss_pred hhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeeeec
Confidence 468999999999999865 488888544433222 34556899999999876
Q ss_pred ---CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC---------------------------CCcEEEeeccccccCCC
Q 042825 473 ---GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG---------------------------DDMRVADFGLVRLVPEN 522 (631)
Q Consensus 473 ---gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g---------------------------~~~kl~DFGla~~~~~~ 522 (631)
|+|..|...+ ..++.....+++.+|.+| +.+||+|.|||+.+...
T Consensus 125 ~TSGtLr~Y~kk~-----~~vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~s 199 (632)
T KOG0584|consen 125 FTSGTLREYRKKH-----RRVNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRKS 199 (632)
T ss_pred ccCCcHHHHHHHh-----ccCCHHHHHHHHHHHHHHhhhhhcCCCCccccccccceEEEcCCcCceeecchhHHHHhhcc
Confidence 8888877542 223444445555566655 67899999999987522
Q ss_pred CccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHhH------hhhc-CC
Q 042825 523 GKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQ------KMHK-NH 595 (631)
Q Consensus 523 ~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~~------~~~~-~~ 595 (631)
....++||+.|||||+.. ..|++.+||||||+.|+||+|+..||...... ..+.+.+- .+.. ..
T Consensus 200 ----~aksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~----AQIYKKV~SGiKP~sl~kV~d 270 (632)
T KOG0584|consen 200 ----HAKSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSECTNP----AQIYKKVTSGIKPAALSKVKD 270 (632)
T ss_pred ----ccceeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhhhCCH----HHHHHHHHcCCCHHHhhccCC
Confidence 234589999999999986 78999999999999999999999999754322 11222221 1111 13
Q ss_pred hhHHHHHHhhcCCChhhHHhHHHHHHHHHhh
Q 042825 596 DTFQMAIDKTIQLDEENLANVSTVAELGDHC 626 (631)
Q Consensus 596 ~~l~~~id~~L~~d~~~r~~~~~vl~lal~C 626 (631)
++++++|.+||.. ..+|+++.++++-...+
T Consensus 271 Pevr~fIekCl~~-~~~R~sa~eLL~d~Ff~ 300 (632)
T KOG0584|consen 271 PEVREFIEKCLAT-KSERLSAKELLKDPFFD 300 (632)
T ss_pred HHHHHHHHHHhcC-chhccCHHHHhhChhhc
Confidence 6899999999976 88899999998765544
|
|
| >KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.78 E-value=2.6e-19 Score=178.37 Aligned_cols=196 Identities=17% Similarity=0.297 Sum_probs=127.8
Q ss_pred cCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc-----------------------
Q 042825 417 TNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK----------------------- 472 (631)
Q Consensus 417 t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~----------------------- 472 (631)
+-.|...+++|.|+||.||+|.+. +++.||||+...+.. ---+|+++|++
T Consensus 23 ~i~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r------~knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~ 96 (364)
T KOG0658|consen 23 EISYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKR------YKNRELQIMRKLDHPNIVRLLYFFSSSTESDEVY 96 (364)
T ss_pred EEEEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCC------cCcHHHHHHHhcCCcCeeeEEEEEEecCCCchhH
Confidence 335667899999999999999965 478999999865431 11345566554
Q ss_pred ---------CChhHHhHhhhhcC---------------CCCCCHHHHHHHHHHhhcC---------CCcEEEeecccccc
Q 042825 473 ---------GTLGRHLFNWEEEG---------------LEPLEWNTRLNIALDVARG---------DDMRVADFGLVRLV 519 (631)
Q Consensus 473 ---------gsL~~~L~~~~~~~---------------~~~L~~~~~~~I~~~ia~g---------~~~kl~DFGla~~~ 519 (631)
.+|.+.+..+.... ..++.+.|..+|++...+- +.+||||||-|+.+
T Consensus 97 lnlVleymP~tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~IcHRDIKPqNlLvD~~tg~LKicDFGSAK~L 176 (364)
T KOG0658|consen 97 LNLVLEYMPETLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHGICHRDIKPQNLLVDPDTGVLKICDFGSAKVL 176 (364)
T ss_pred HHHHHHhchHHHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcCcccCCCChheEEEcCCCCeEEeccCCcceee
Confidence 22333333221111 1122333333333332222 56799999999988
Q ss_pred CCCCccccccccccCcccccccccccC-CCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHH-----------H-
Q 042825 520 PENGKHSILTKVAGTFGYLAPEYIVTG-RITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLA-----------T- 586 (631)
Q Consensus 520 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~-----------~- 586 (631)
..+. .......|..|.|||.+.+. .|+.+.||||.|||+.||+-|++-|.+..........+. .
T Consensus 177 ~~~e---pniSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~lG~Pt~e~I~~m 253 (364)
T KOG0658|consen 177 VKGE---PNISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKVLGTPTREDIKSM 253 (364)
T ss_pred ccCC---CceeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHHhCCCCHHHHhhc
Confidence 5332 23456789999999999876 599999999999999999999999987543321111110 0
Q ss_pred ----------------HhH-hhhcCChhHHHHHHhhcCCChhhHHhHHHHHH
Q 042825 587 ----------------WFQ-KMHKNHDTFQMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 587 ----------------~~~-~~~~~~~~l~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
|.+ .......+..+++.++|+.+|..|.++.+++.
T Consensus 254 n~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~ 305 (364)
T KOG0658|consen 254 NPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALA 305 (364)
T ss_pred CcccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhc
Confidence 001 00112467889999999999999998877653
|
|
| >KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.78 E-value=7.7e-19 Score=187.13 Aligned_cols=147 Identities=24% Similarity=0.310 Sum_probs=116.5
Q ss_pred CcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc-------------------------
Q 042825 419 NFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK------------------------- 472 (631)
Q Consensus 419 ~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~------------------------- 472 (631)
+|.+.+.||+|+||.|.||... +++.||||+++... .-..+-..|+.+|..
T Consensus 187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k---~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~Hl 263 (586)
T KOG0667|consen 187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKK---RFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNHL 263 (586)
T ss_pred EEEEEEEecccccceeEEEEecCCCcEEEEEeeccCh---HHHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccce
Confidence 7899999999999999999854 69999999998653 344556677777765
Q ss_pred --------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC--------------------------CCcEEEeeccccc
Q 042825 473 --------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG--------------------------DDMRVADFGLVRL 518 (631)
Q Consensus 473 --------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g--------------------------~~~kl~DFGla~~ 518 (631)
-+|.+++.. ....+++......|+.+++.+ ..+||+|||.|..
T Consensus 264 ciVfELL~~NLYellK~---n~f~Glsl~~ir~~~~Qil~~L~~L~~l~IIHcDLKPENILL~~~~r~~vKVIDFGSSc~ 340 (586)
T KOG0667|consen 264 CIVFELLSTNLYELLKN---NKFRGLSLPLVRKFAQQILTALLFLHELGIIHCDLKPENILLKDPKRSRIKVIDFGSSCF 340 (586)
T ss_pred eeeehhhhhhHHHHHHh---cCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCChhheeeccCCcCceeEEecccccc
Confidence 344444432 344567777777888887776 4679999999987
Q ss_pred cCCCCccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCC
Q 042825 519 VPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHS 576 (631)
Q Consensus 519 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~ 576 (631)
.... ....+-+..|.|||++.+.+|+.+.||||||||+.||++|.+-|.+..+
T Consensus 341 ~~q~-----vytYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~ne 393 (586)
T KOG0667|consen 341 ESQR-----VYTYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGDNE 393 (586)
T ss_pred cCCc-----ceeeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCCCCH
Confidence 6321 2267788999999999999999999999999999999999888877654
|
|
| >cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.78 E-value=6.5e-18 Score=178.15 Aligned_cols=202 Identities=19% Similarity=0.289 Sum_probs=140.9
Q ss_pred HHhhcCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhcCChhHH-------------
Q 042825 413 LRNATNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTKGTLGRH------------- 478 (631)
Q Consensus 413 l~~~t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~gsL~~~------------- 478 (631)
+....++|+..+.||+|+||.||++... +|..||||++..........+.+.+|++++.+-.....
T Consensus 10 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 89 (343)
T cd07880 10 IWEVPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSL 89 (343)
T ss_pred hhccccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCccc
Confidence 3456788999999999999999999854 68999999986543334445678889888876111000
Q ss_pred ----------------hHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccc
Q 042825 479 ----------------LFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRL 518 (631)
Q Consensus 479 ----------------L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~ 518 (631)
+..+.. ...+++.....++.+++++ +.++++|||+++.
T Consensus 90 ~~~~~~~lv~e~~~~~l~~~~~--~~~l~~~~~~~i~~qi~~al~~LH~~gi~H~dlkp~Nill~~~~~~kl~dfg~~~~ 167 (343)
T cd07880 90 DRFHDFYLVMPFMGTDLGKLMK--HEKLSEDRIQFLVYQMLKGLKYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQ 167 (343)
T ss_pred cccceEEEEEecCCCCHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeecccccc
Confidence 001111 1357888888888888765 4578999999986
Q ss_pred cCCCCccccccccccCccccccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHH-------HHh--
Q 042825 519 VPENGKHSILTKVAGTFGYLAPEYIVT-GRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLA-------TWF-- 588 (631)
Q Consensus 519 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~-------~~~-- 588 (631)
.... .....++..|+|||++.+ ..++.++||||+||++||+++|+.||............+. .|.
T Consensus 168 ~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (343)
T cd07880 168 TDSE-----MTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPSKEFVQK 242 (343)
T ss_pred cccC-----ccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHh
Confidence 5321 234567899999999875 4588999999999999999999999975432111111000 000
Q ss_pred ----------H-----------hh-hcCChhHHHHHHhhcCCChhhHHhHHHHHH
Q 042825 589 ----------Q-----------KM-HKNHDTFQMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 589 ----------~-----------~~-~~~~~~l~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
. .. ...+..+.+++++|+..||.+|+++.++++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~ 297 (343)
T cd07880 243 LQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALA 297 (343)
T ss_pred hcchhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 0 00 122456889999999999999999998774
|
Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12 |
| >smart00219 TyrKc Tyrosine kinase, catalytic domain | Back alignment and domain information |
|---|
Probab=99.78 E-value=3.2e-18 Score=172.11 Aligned_cols=195 Identities=28% Similarity=0.392 Sum_probs=137.5
Q ss_pred ccceeecCCCceEEEEEEecC-----CcEEEEEEEecCCCCHHHHHHHHHHHHHHhc-----------------------
Q 042825 421 SEENRLGRGGVGTVYKGELKD-----GTEVGVKRMELGSVTEQGIAQFESEITVLTK----------------------- 472 (631)
Q Consensus 421 ~~~~~iG~G~fg~Vyk~~~~~-----g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~----------------------- 472 (631)
+..+.||.|+||.||+++..+ +..||+|++..... ....+.+..|++++.+
T Consensus 2 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i~ 80 (258)
T smart00219 2 TLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDAD-EQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIVM 80 (258)
T ss_pred cccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCC-hHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEEE
Confidence 456889999999999999764 38899999965532 2256788889888765
Q ss_pred -----CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCC
Q 042825 473 -----GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENG 523 (631)
Q Consensus 473 -----gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~ 523 (631)
+++.+++... ....+.+.....++.+++.+ +.++|+|||+++......
T Consensus 81 e~~~~~~l~~~~~~~---~~~~~~~~~~~~~~~ql~~~l~~lh~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~ 157 (258)
T smart00219 81 EYMEGGDLLDYLRKN---RPKELSLSDLLSFALQIARGMEYLESKNFIHRDLAARNCLVGENLVVKISDFGLSRDLYDDD 157 (258)
T ss_pred eccCCCCHHHHHHhh---hhccCCHHHHHHHHHHHHHHHHHHhcCCeeecccccceEEEccCCeEEEcccCCceeccccc
Confidence 4555554321 11127888888888777664 357899999998765332
Q ss_pred ccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChHHHHHHHHHh--HhhhcCChhHHH
Q 042825 524 KHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT-GRKVVDATHSDPEYIIHLATWF--QKMHKNHDTFQM 600 (631)
Q Consensus 524 ~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~Ellt-G~~P~~~~~~~~~~~~~l~~~~--~~~~~~~~~l~~ 600 (631)
.. ......++..|+|||......++.++||||+|++++||++ |+.||....... ....+.... ......+.++.+
T Consensus 158 ~~-~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 235 (258)
T smart00219 158 YY-KKKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSNEE-VLEYLKKGYRLPKPENCPPEIYK 235 (258)
T ss_pred cc-ccccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCHHH-HHHHHhcCCCCCCCCcCCHHHHH
Confidence 11 1112347789999999988889999999999999999998 788887532211 111111110 011123467899
Q ss_pred HHHhhcCCChhhHHhHHHHHH
Q 042825 601 AIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 601 ~id~~L~~d~~~r~~~~~vl~ 621 (631)
++.+++..+|++|+++.++++
T Consensus 236 ~i~~~l~~~p~~Rpt~~~ll~ 256 (258)
T smart00219 236 LMLQCWAEDPEDRPTFSELVE 256 (258)
T ss_pred HHHHHCcCChhhCcCHHHHHh
Confidence 999999999999999998876
|
Phosphotransferases. Tyrosine-specific kinase subfamily. |
| >cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase | Back alignment and domain information |
|---|
Probab=99.78 E-value=2.8e-18 Score=176.05 Aligned_cols=193 Identities=19% Similarity=0.320 Sum_probs=137.4
Q ss_pred CcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc-------------------------
Q 042825 419 NFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK------------------------- 472 (631)
Q Consensus 419 ~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~------------------------- 472 (631)
.|...+.||+|++|.||++... +++.+|+|++.... ....+.+.+|+.++..
T Consensus 20 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~--~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~ 97 (285)
T cd06648 20 YLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRK--QQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEF 97 (285)
T ss_pred hhhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccc--hhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEec
Confidence 3455689999999999999864 68899999986532 2344567888887765
Q ss_pred ---CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCCcc
Q 042825 473 ---GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENGKH 525 (631)
Q Consensus 473 ---gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~~~ 525 (631)
++|.+++. . ..+++.....++.+++.+ +.++++|||+++......
T Consensus 98 ~~~~~L~~~~~----~--~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~-- 169 (285)
T cd06648 98 LEGGALTDIVT----H--TRMNEEQIATVCLAVLKALSFLHAQGVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEV-- 169 (285)
T ss_pred cCCCCHHHHHH----h--CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChhhEEEcCCCcEEEcccccchhhccCC--
Confidence 34444442 1 346777777777777665 457899999987653221
Q ss_pred ccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHhHh----hhcCChhHHHH
Q 042825 526 SILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQK----MHKNHDTFQMA 601 (631)
Q Consensus 526 ~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~~~----~~~~~~~l~~~ 601 (631)
.......|+..|+|||...+..++.++|||||||++|||++|+.||....... ....+...... ....+..+.++
T Consensus 170 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~l 248 (285)
T cd06648 170 PRRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQ-AMKRIRDNLPPKLKNLHKVSPRLRSF 248 (285)
T ss_pred cccccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCHHH-HHHHHHhcCCCCCcccccCCHHHHHH
Confidence 12233568999999999988889999999999999999999999997543221 11111111111 11124578999
Q ss_pred HHhhcCCChhhHHhHHHHHHH
Q 042825 602 IDKTIQLDEENLANVSTVAEL 622 (631)
Q Consensus 602 id~~L~~d~~~r~~~~~vl~l 622 (631)
+++|+..+|++|+++.++++.
T Consensus 249 i~~~l~~~p~~Rpt~~~il~~ 269 (285)
T cd06648 249 LDRMLVRDPAQRATAAELLNH 269 (285)
T ss_pred HHHHcccChhhCcCHHHHccC
Confidence 999999999999999988763
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun |
| >cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3 | Back alignment and domain information |
|---|
Probab=99.78 E-value=5.6e-18 Score=173.24 Aligned_cols=186 Identities=21% Similarity=0.314 Sum_probs=127.1
Q ss_pred eecCCCceEEEEEEec-CCcEEEEEEEecCCCCHH-HHHHHHHHHHHHhc------------------------------
Q 042825 425 RLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQ-GIAQFESEITVLTK------------------------------ 472 (631)
Q Consensus 425 ~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~-~~~~~~~Ei~~l~~------------------------------ 472 (631)
+||+|+||.||++... +++.+|+|.+........ ....+.+|..++..
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 80 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN 80 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence 4899999999999965 589999999876433221 12223344322211
Q ss_pred -CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCCcccc
Q 042825 473 -GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENGKHSI 527 (631)
Q Consensus 473 -gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~~~~~ 527 (631)
|+|.+++.. ...+.+.....++.+++.| +.++++|||+++..... .
T Consensus 81 ~~~L~~~i~~-----~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~----~ 151 (279)
T cd05633 81 GGDLHYHLSQ-----HGVFSEKEMRFYATEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKK----K 151 (279)
T ss_pred CCCHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCCcCCCCCCHHHEEECCCCCEEEccCCcceecccc----C
Confidence 455544431 2357888888888888765 45789999999765311 1
Q ss_pred ccccccCccccccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHhH----hh-hcCChhHHHH
Q 042825 528 LTKVAGTFGYLAPEYIVT-GRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQ----KM-HKNHDTFQMA 601 (631)
Q Consensus 528 ~~~~~gt~~Y~aPE~~~~-~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~~----~~-~~~~~~l~~~ 601 (631)
.....|+..|+|||.... ..++.++|||||||++|||++|+.||......... .+..... .. ...+.++.++
T Consensus 152 ~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l 229 (279)
T cd05633 152 PHASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKH--EIDRMTLTVNVELPDSFSPELKSL 229 (279)
T ss_pred ccCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHH--HHHHHhhcCCcCCccccCHHHHHH
Confidence 223568999999999864 55899999999999999999999999754332111 1111110 00 1124678999
Q ss_pred HHhhcCCChhhHH-----hHHHHHH
Q 042825 602 IDKTIQLDEENLA-----NVSTVAE 621 (631)
Q Consensus 602 id~~L~~d~~~r~-----~~~~vl~ 621 (631)
+.+|+..||.+|+ ++.++++
T Consensus 230 i~~~l~~~p~~R~~~~~~~~~~~~~ 254 (279)
T cd05633 230 LEGLLQRDVSKRLGCLGRGAQEVKE 254 (279)
T ss_pred HHHHhcCCHHHhcCCCCCCHHHHHh
Confidence 9999999999998 5777765
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi |
| >cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.8e-18 Score=174.05 Aligned_cols=191 Identities=23% Similarity=0.343 Sum_probs=138.1
Q ss_pred CCcccceeecCCCceEEEEEEecCCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc-------------------------
Q 042825 418 NNFSEENRLGRGGVGTVYKGELKDGTEVGVKRMELGSVTEQGIAQFESEITVLTK------------------------- 472 (631)
Q Consensus 418 ~~f~~~~~iG~G~fg~Vyk~~~~~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~------------------------- 472 (631)
++|...+.||+|+||.||++.. +++.||+|.+.... ....+.+|+.++.+
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~-~~~~~~iK~~~~~~----~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~v~e~~ 80 (254)
T cd05083 6 QKLTLGEIIGEGEFGAVLQGEY-TGQKVAVKNIKCDV----TAQAFLEETAVMTKLHHKNLVRLLGVILHNGLYIVMELM 80 (254)
T ss_pred HHceeeeeeccCCCCceEeccc-CCCceEEEeecCcc----hHHHHHHHHHHHHhCCCCCcCeEEEEEcCCCcEEEEECC
Confidence 3577889999999999999975 57889999986532 34578889888765
Q ss_pred --CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCCccc
Q 042825 473 --GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENGKHS 526 (631)
Q Consensus 473 --gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~~~~ 526 (631)
++|.+++.. .....+++..+..++.+++.+ +.+||+|||+++.....
T Consensus 81 ~~~~L~~~l~~---~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~---- 153 (254)
T cd05083 81 SKGNLVNFLRT---RGRALVSVIQLLQFSLDVAEGMEYLESKKLVHRDLAARNILVSEDGVAKVSDFGLARVGSMG---- 153 (254)
T ss_pred CCCCHHHHHHh---cCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCCcEEECCCccceecccc----
Confidence 566666542 223457888888888877765 45789999999764311
Q ss_pred cccccccCcccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChHHHHHHHHHhHh--hhcCChhHHHHHH
Q 042825 527 ILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT-GRKVVDATHSDPEYIIHLATWFQK--MHKNHDTFQMAID 603 (631)
Q Consensus 527 ~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~Ellt-G~~P~~~~~~~~~~~~~l~~~~~~--~~~~~~~l~~~id 603 (631)
......+..|+|||++.+..++.++|||||||++|||++ |+.||......+ ....+....+. ....+..+.+++.
T Consensus 154 -~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~li~ 231 (254)
T cd05083 154 -VDNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKE-VKECVEKGYRMEPPEGCPADVYVLMT 231 (254)
T ss_pred -CCCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHHH-HHHHHhCCCCCCCCCcCCHHHHHHHH
Confidence 122334678999999988889999999999999999998 999997543321 11111111000 0112357899999
Q ss_pred hhcCCChhhHHhHHHHHHH
Q 042825 604 KTIQLDEENLANVSTVAEL 622 (631)
Q Consensus 604 ~~L~~d~~~r~~~~~vl~l 622 (631)
+|+..+|+.||++.++++.
T Consensus 232 ~~l~~~p~~Rp~~~~l~~~ 250 (254)
T cd05083 232 SCWETEPKKRPSFHKLREK 250 (254)
T ss_pred HHcCCChhhCcCHHHHHHH
Confidence 9999999999999988764
|
Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki |
| >cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.77 E-value=2.8e-18 Score=174.41 Aligned_cols=194 Identities=23% Similarity=0.282 Sum_probs=133.1
Q ss_pred eeecCCCceEEEEEEecC-Cc--EEEEEEEecCCCCHHHHHHHHHHHHHHhc----------------------------
Q 042825 424 NRLGRGGVGTVYKGELKD-GT--EVGVKRMELGSVTEQGIAQFESEITVLTK---------------------------- 472 (631)
Q Consensus 424 ~~iG~G~fg~Vyk~~~~~-g~--~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~---------------------------- 472 (631)
++||+|+||.||+|+.++ +. .+|+|.+... ......+.+.+|++++.+
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~-~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~ 79 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEY-ASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAP 79 (270)
T ss_pred CcCCCCCCceEEEEEEcCCCCeeEEEEEEcccc-CCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCC
Confidence 468999999999999764 43 4688887643 233455678889887754
Q ss_pred -CChhHHhHhhhh-----------cCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccc
Q 042825 473 -GTLGRHLFNWEE-----------EGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLV 516 (631)
Q Consensus 473 -gsL~~~L~~~~~-----------~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla 516 (631)
|+|.+++..... .....+.+.....++.+++.+ ..+||+|||++
T Consensus 80 ~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nili~~~~~~kl~dfgl~ 159 (270)
T cd05047 80 HGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLS 159 (270)
T ss_pred CCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccccceEEEcCCCeEEECCCCCc
Confidence 566666643211 112347888888888887765 34689999998
Q ss_pred cccCCCCccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChHHHHHHHH-Hh-Hhhhc
Q 042825 517 RLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT-GRKVVDATHSDPEYIIHLAT-WF-QKMHK 593 (631)
Q Consensus 517 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~Ellt-G~~P~~~~~~~~~~~~~l~~-~~-~~~~~ 593 (631)
+.... .........+..|+|||++....++.++|||||||++|||++ |+.||....... ....+.. +. .....
T Consensus 160 ~~~~~---~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~ 235 (270)
T cd05047 160 RGQEV---YVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAE-LYEKLPQGYRLEKPLN 235 (270)
T ss_pred cccch---hhhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCHHH-HHHHHhCCCCCCCCCc
Confidence 64321 111112234668999999988889999999999999999997 999997543221 1111111 11 11112
Q ss_pred CChhHHHHHHhhcCCChhhHHhHHHHHHH
Q 042825 594 NHDTFQMAIDKTIQLDEENLANVSTVAEL 622 (631)
Q Consensus 594 ~~~~l~~~id~~L~~d~~~r~~~~~vl~l 622 (631)
...++.+++.+|+..+|.+|+++.+++..
T Consensus 236 ~~~~~~~li~~~l~~~p~~Rps~~~il~~ 264 (270)
T cd05047 236 CDDEVYDLMRQCWREKPYERPSFAQILVS 264 (270)
T ss_pred CCHHHHHHHHHHcccChhhCCCHHHHHHH
Confidence 24678999999999999999999988764
|
Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l |
| >cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.77 E-value=4.7e-18 Score=170.44 Aligned_cols=196 Identities=21% Similarity=0.312 Sum_probs=143.7
Q ss_pred CcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc-------------------------
Q 042825 419 NFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK------------------------- 472 (631)
Q Consensus 419 ~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~------------------------- 472 (631)
+|+..+.||+|++|.||+++.. +++.||+|.+............+.+|++++.+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 80 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEY 80 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEec
Confidence 4677899999999999999866 58899999998765544566789999998876
Q ss_pred ---CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCCcc
Q 042825 473 ---GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENGKH 525 (631)
Q Consensus 473 ---gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~~~ 525 (631)
++|.+++.. ...+++..+..++.+++.+ +.++|+|||+++......
T Consensus 81 ~~~~~L~~~~~~-----~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~-- 153 (254)
T cd06627 81 AENGSLRQIIKK-----FGPFPESLVAVYVYQVLQGLAYLHEQGVIHRDIKAANILTTKDGVVKLADFGVATKLNDVS-- 153 (254)
T ss_pred CCCCcHHHHHHh-----ccCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEECCCCCEEEeccccceecCCCc--
Confidence 344444421 2457888888887777654 457899999998764222
Q ss_pred ccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHhHhh--hcCChhHHHHHH
Q 042825 526 SILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQKM--HKNHDTFQMAID 603 (631)
Q Consensus 526 ~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~~~~--~~~~~~l~~~id 603 (631)
.......++..|+|||...+..++.++||||+|+++|||++|+.||....... ............ ....+.+.+++.
T Consensus 154 ~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~ 232 (254)
T cd06627 154 KDDASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNPMA-ALFRIVQDDHPPLPEGISPELKDFLM 232 (254)
T ss_pred ccccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccHHH-HHHHHhccCCCCCCCCCCHHHHHHHH
Confidence 11234568999999999887778999999999999999999999997543211 111111111111 112467899999
Q ss_pred hhcCCChhhHHhHHHHHHH
Q 042825 604 KTIQLDEENLANVSTVAEL 622 (631)
Q Consensus 604 ~~L~~d~~~r~~~~~vl~l 622 (631)
+++..+|++|+++.+++..
T Consensus 233 ~~l~~~p~~R~~~~~~l~~ 251 (254)
T cd06627 233 QCFQKDPNLRPTAKQLLKH 251 (254)
T ss_pred HHHhCChhhCcCHHHHhcC
Confidence 9999999999999988753
|
Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast |
| >cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1 | Back alignment and domain information |
|---|
Probab=99.77 E-value=4e-18 Score=173.68 Aligned_cols=198 Identities=18% Similarity=0.275 Sum_probs=140.7
Q ss_pred CCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCC-CHHHHHHHHHHHHHHhc-----------------------
Q 042825 418 NNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSV-TEQGIAQFESEITVLTK----------------------- 472 (631)
Q Consensus 418 ~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~-~~~~~~~~~~Ei~~l~~----------------------- 472 (631)
++|...+.||+|+||.||+|+.. +|+.||+|++..... .....+.+.+|++++.+
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv 80 (280)
T cd05581 1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFV 80 (280)
T ss_pred CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEE
Confidence 46888899999999999999976 689999999875332 22344567777777755
Q ss_pred ------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCC
Q 042825 473 ------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPEN 522 (631)
Q Consensus 473 ------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~ 522 (631)
++|.+++.. ...+++.....|+.+++.+ +.++++|||++......
T Consensus 81 ~e~~~~~~L~~~l~~-----~~~l~~~~~~~i~~ql~~~l~~Lh~~~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~~ 155 (280)
T cd05581 81 LEYAPNGELLQYIRK-----YGSLDEKCTRFYAAEILLALEYLHSKGIIHRDLKPENILLDKDMHIKITDFGTAKVLDPN 155 (280)
T ss_pred EcCCCCCcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEecCCccccccCCc
Confidence 333333321 2368888888888888776 45789999999866422
Q ss_pred Ccc------------------ccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHH
Q 042825 523 GKH------------------SILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHL 584 (631)
Q Consensus 523 ~~~------------------~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l 584 (631)
... .......++..|+|||......++.++||||||++++|+++|+.||....... ....+
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~-~~~~~ 234 (280)
T cd05581 156 SSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNEYL-TFQKI 234 (280)
T ss_pred cccccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccHHH-HHHHH
Confidence 210 12233567899999999988889999999999999999999999998543211 11111
Q ss_pred HHHh-HhhhcCChhHHHHHHhhcCCChhhHHhH----HHHHH
Q 042825 585 ATWF-QKMHKNHDTFQMAIDKTIQLDEENLANV----STVAE 621 (631)
Q Consensus 585 ~~~~-~~~~~~~~~l~~~id~~L~~d~~~r~~~----~~vl~ 621 (631)
..-. ......++.+.+++..|+..+|.+|+++ .++++
T Consensus 235 ~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~ 276 (280)
T cd05581 235 LKLEYSFPPNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKA 276 (280)
T ss_pred HhcCCCCCCccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhc
Confidence 1100 0111224678999999999999999999 76654
|
Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto |
| >KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.77 E-value=7.5e-20 Score=173.99 Aligned_cols=193 Identities=21% Similarity=0.312 Sum_probs=130.3
Q ss_pred cceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhcC---------------------------
Q 042825 422 EENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTKG--------------------------- 473 (631)
Q Consensus 422 ~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~g--------------------------- 473 (631)
....||.|+||+|+|-.++ .|+..|||+++.... +++.+++..|.++..+.
T Consensus 68 dlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~-~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCMELMd 146 (361)
T KOG1006|consen 68 DLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNI-EKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICMELMD 146 (361)
T ss_pred HHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccc-hHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHHHHh
Confidence 4578999999999999876 599999999987653 56778899998877661
Q ss_pred -Chh---HHhHhhhhc-------------CCCCCCHH-HHHHHHHHhhc--------CCCcEEEeeccccccCCCCcccc
Q 042825 474 -TLG---RHLFNWEEE-------------GLEPLEWN-TRLNIALDVAR--------GDDMRVADFGLVRLVPENGKHSI 527 (631)
Q Consensus 474 -sL~---~~L~~~~~~-------------~~~~L~~~-~~~~I~~~ia~--------g~~~kl~DFGla~~~~~~~~~~~ 527 (631)
++. .+++..... ....|++. +.++|++...+ .+++|++|||++..+.. +..
T Consensus 147 ~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~lkiIHRDvKPSNILldr~G~vKLCDFGIcGqLv~---SiA 223 (361)
T KOG1006|consen 147 ISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEELKIIHRDVKPSNILLDRHGDVKLCDFGICGQLVD---SIA 223 (361)
T ss_pred hhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHhhhhhccCChhheEEecCCCEeeecccchHhHHH---HHH
Confidence 111 111110000 01123332 22344443332 27899999999987631 223
Q ss_pred ccccccCcccccccccccC--CCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHhH----hh------hcCC
Q 042825 528 LTKVAGTFGYLAPEYIVTG--RITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQ----KM------HKNH 595 (631)
Q Consensus 528 ~~~~~gt~~Y~aPE~~~~~--~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~~----~~------~~~~ 595 (631)
.+.-.|...|||||.+... .|+-++||||+|++|||+.||+.|++.... ...++...+. .+ .+.+
T Consensus 224 kT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~s---vfeql~~Vv~gdpp~l~~~~~~~~~s 300 (361)
T KOG1006|consen 224 KTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDS---VFEQLCQVVIGDPPILLFDKECVHYS 300 (361)
T ss_pred hhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHH---HHHHHHHHHcCCCCeecCcccccccC
Confidence 4556799999999998643 499999999999999999999999986433 2222322221 11 1123
Q ss_pred hhHHHHHHhhcCCChhhHHhHHHHHH
Q 042825 596 DTFQMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 596 ~~l~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
..+...|.-|+..|...||...++.+
T Consensus 301 ~~~~~fintCl~Kd~~~Rpky~~Lk~ 326 (361)
T KOG1006|consen 301 FSMVRFINTCLIKDRSDRPKYDDLKK 326 (361)
T ss_pred HHHHHHHHHHhhcccccCcchhhhhc
Confidence 56788999999999999988877653
|
|
| >KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.77 E-value=8.5e-19 Score=176.68 Aligned_cols=196 Identities=24% Similarity=0.313 Sum_probs=136.4
Q ss_pred CcccceeecCCCceEEEEEEecC-CcEEEEEEEecCCCC-HHHHHHHHHHHHHHhc------------------------
Q 042825 419 NFSEENRLGRGGVGTVYKGELKD-GTEVGVKRMELGSVT-EQGIAQFESEITVLTK------------------------ 472 (631)
Q Consensus 419 ~f~~~~~iG~G~fg~Vyk~~~~~-g~~vAvK~l~~~~~~-~~~~~~~~~Ei~~l~~------------------------ 472 (631)
.|+..+.||.|.-|+||.+++++ +..+|+|++.+..+. .+...+.+.|-+||+.
T Consensus 78 ~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl~me 157 (459)
T KOG0610|consen 78 HFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCLVME 157 (459)
T ss_pred HHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeEEEEe
Confidence 45567899999999999999875 689999999876543 3445566777777765
Q ss_pred ----CChhHHhHhhhh-------------cCCCCCCHHHHHHHHHHhhcC--------CCcEEEeeccccccCC------
Q 042825 473 ----GTLGRHLFNWEE-------------EGLEPLEWNTRLNIALDVARG--------DDMRVADFGLVRLVPE------ 521 (631)
Q Consensus 473 ----gsL~~~L~~~~~-------------~~~~~L~~~~~~~I~~~ia~g--------~~~kl~DFGla~~~~~------ 521 (631)
|+|+...+.... +..-+|.+.|.+.|+....+- +++-++||-|+.....
T Consensus 158 yCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHmlGivYRDLKPENILvredGHIMLsDFDLS~~~~~~Pt~~~ 237 (459)
T KOG0610|consen 158 YCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHMLGIVYRDLKPENILVREDGHIMLSDFDLSLRCPVSPTLVK 237 (459)
T ss_pred cCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhhceeeccCCcceeEEecCCcEEeeeccccccCCCCCeeec
Confidence 777776653211 112245555555555544443 5677999988643210
Q ss_pred ---------------------------CCc---------------------cccccccccCcccccccccccCCCCchhh
Q 042825 522 ---------------------------NGK---------------------HSILTKVAGTFGYLAPEYIVTGRITAKVD 553 (631)
Q Consensus 522 ---------------------------~~~---------------------~~~~~~~~gt~~Y~aPE~~~~~~~~~k~D 553 (631)
..+ ......++||..|+|||++.+..++.++|
T Consensus 238 s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~GHgsAVD 317 (459)
T KOG0610|consen 238 SSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEGHGSAVD 317 (459)
T ss_pred cCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecCCCCchhh
Confidence 000 01123468999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHhHhhh---cCChhHHHHHHhhcCCChhhHHh
Q 042825 554 VYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQKMH---KNHDTFQMAIDKTIQLDEENLAN 615 (631)
Q Consensus 554 VwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~~~~~---~~~~~l~~~id~~L~~d~~~r~~ 615 (631)
+|+|||++|||+.|+.||.+...++ ...+++....... ..+..++|+|.+.|.+||..|..
T Consensus 318 WWtfGIflYEmLyG~TPFKG~~~~~-Tl~NIv~~~l~Fp~~~~vs~~akDLIr~LLvKdP~kRlg 381 (459)
T KOG0610|consen 318 WWTFGIFLYEMLYGTTPFKGSNNKE-TLRNIVGQPLKFPEEPEVSSAAKDLIRKLLVKDPSKRLG 381 (459)
T ss_pred HHHHHHHHHHHHhCCCCcCCCCchh-hHHHHhcCCCcCCCCCcchhHHHHHHHHHhccChhhhhc
Confidence 9999999999999999999876553 2233332221111 22367899999999999999865
|
|
| >cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.77 E-value=4.5e-18 Score=172.29 Aligned_cols=197 Identities=21% Similarity=0.304 Sum_probs=136.4
Q ss_pred CCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCC---CCHHHHHHHHHHHHHHhc---------------------
Q 042825 418 NNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGS---VTEQGIAQFESEITVLTK--------------------- 472 (631)
Q Consensus 418 ~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~---~~~~~~~~~~~Ei~~l~~--------------------- 472 (631)
.+|...+.||+|+||.||+|+.. ++..||+|.+.... ........+.+|++++++
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKL 81 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEE
Confidence 47888999999999999999965 58999999885432 123455678899998876
Q ss_pred ---------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeecccccc
Q 042825 473 ---------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLV 519 (631)
Q Consensus 473 ---------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~ 519 (631)
++|.+++. ....+.+.....++.+++.+ +.++|+|||+++..
T Consensus 82 ~~v~e~~~~~~L~~~~~-----~~~~l~~~~~~~~~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~ 156 (264)
T cd06653 82 SIFVEYMPGGSIKDQLK-----AYGALTENVTRRYTRQILQGVSYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRI 156 (264)
T ss_pred EEEEEeCCCCcHHHHHH-----HcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEECcccccccc
Confidence 22333321 11346677777777777765 45789999999865
Q ss_pred CCCCc-cccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHh-Hhhh--cCC
Q 042825 520 PENGK-HSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWF-QKMH--KNH 595 (631)
Q Consensus 520 ~~~~~-~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~-~~~~--~~~ 595 (631)
..... ........|+..|+|||++.+..++.++|||||||++|||++|+.||....... ......... .... ...
T Consensus 157 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-~~~~~~~~~~~~~~p~~~~ 235 (264)
T cd06653 157 QTICMSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEAMA-AIFKIATQPTKPMLPDGVS 235 (264)
T ss_pred ccccccCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCHHH-HHHHHHcCCCCCCCCcccC
Confidence 32111 111234568999999999988889999999999999999999999997543221 111111110 0111 124
Q ss_pred hhHHHHHHhhcCCChhhHHhHHHHHH
Q 042825 596 DTFQMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 596 ~~l~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
+.+.+++++++. ++..|+++.++++
T Consensus 236 ~~~~~~i~~~l~-~~~~r~~~~~~~~ 260 (264)
T cd06653 236 DACRDFLKQIFV-EEKRRPTAEFLLR 260 (264)
T ss_pred HHHHHHHHHHhc-CcccCccHHHHhc
Confidence 678999999997 5688999886653
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho |
| >cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase | Back alignment and domain information |
|---|
Probab=99.77 E-value=2.7e-18 Score=176.88 Aligned_cols=194 Identities=20% Similarity=0.335 Sum_probs=138.9
Q ss_pred CCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc------------------------
Q 042825 418 NNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK------------------------ 472 (631)
Q Consensus 418 ~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~------------------------ 472 (631)
++|...+.||+|+||.||++... +++.||+|.+.... ....+.+.+|+.++.+
T Consensus 19 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~--~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e 96 (293)
T cd06647 19 KKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQ--QPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVME 96 (293)
T ss_pred hhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEecccc--chHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEEe
Confidence 57888899999999999999854 68899999986432 2234678888887765
Q ss_pred ----CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCCc
Q 042825 473 ----GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENGK 524 (631)
Q Consensus 473 ----gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~~ 524 (631)
+++.+++.. ..+.+..+..++.+++.+ +.++|+|||++.......
T Consensus 97 ~~~~~~L~~~~~~------~~l~~~~~~~i~~~l~~al~~LH~~gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~- 169 (293)
T cd06647 97 YLAGGSLTDVVTE------TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ- 169 (293)
T ss_pred cCCCCcHHHHHhh------cCCCHHHHHHHHHHHHHHHHHHHhCCEeeccCCHHHEEEcCCCCEEEccCcceecccccc-
Confidence 333333321 246777778887777754 457899999987654222
Q ss_pred cccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHhHhhh----cCChhHHH
Q 042825 525 HSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQKMH----KNHDTFQM 600 (631)
Q Consensus 525 ~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~~~~~----~~~~~l~~ 600 (631)
.......|++.|+|||++....++.++|||||||++||+++|+.||........ ...+..+..... .....+++
T Consensus 170 -~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~ 247 (293)
T cd06647 170 -SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRA-LYLIATNGTPELQNPEKLSAIFRD 247 (293)
T ss_pred -cccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhh-eeehhcCCCCCCCCccccCHHHHH
Confidence 122345688999999999888899999999999999999999999975433211 001111111111 11356899
Q ss_pred HHHhhcCCChhhHHhHHHHHHH
Q 042825 601 AIDKTIQLDEENLANVSTVAEL 622 (631)
Q Consensus 601 ~id~~L~~d~~~r~~~~~vl~l 622 (631)
++.+|+..+|++|+++.+++.-
T Consensus 248 li~~~l~~~p~~Rp~~~~il~h 269 (293)
T cd06647 248 FLNRCLEMDVEKRGSAKELLQH 269 (293)
T ss_pred HHHHHccCChhhCcCHHHHhcC
Confidence 9999999999999999988764
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi |
| >cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase | Back alignment and domain information |
|---|
Probab=99.77 E-value=3.9e-18 Score=174.31 Aligned_cols=188 Identities=22% Similarity=0.312 Sum_probs=127.1
Q ss_pred eecCCCceEEEEEEec-CCcEEEEEEEecCCCCH-HHHHHHHHHHH---HHhc---------------------------
Q 042825 425 RLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTE-QGIAQFESEIT---VLTK--------------------------- 472 (631)
Q Consensus 425 ~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~-~~~~~~~~Ei~---~l~~--------------------------- 472 (631)
+||+|+||.||+++.. +++.||+|.+....... .....+..|.. .+..
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN 80 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence 4899999999999865 58899999987643321 11122333322 2211
Q ss_pred -CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCCcccc
Q 042825 473 -GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENGKHSI 527 (631)
Q Consensus 473 -gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~~~~~ 527 (631)
|+|.+++. ....+.+..+..++.++++| +.+||+|||+++..... .
T Consensus 81 g~~L~~~l~-----~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~----~ 151 (278)
T cd05606 81 GGDLHYHLS-----QHGVFSEAEMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKK----K 151 (278)
T ss_pred CCcHHHHHH-----hcCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCCCCHHHEEECCCCCEEEccCcCccccCcc----C
Confidence 44444442 12458899998888888765 45789999999765321 1
Q ss_pred ccccccCcccccccccccC-CCCchhhHHHHHHHHHHHHcCCCCCCCCCCChH-HHHHHHHHhHh--hhcCChhHHHHHH
Q 042825 528 LTKVAGTFGYLAPEYIVTG-RITAKVDVYSFGMILMDLITGRKVVDATHSDPE-YIIHLATWFQK--MHKNHDTFQMAID 603 (631)
Q Consensus 528 ~~~~~gt~~Y~aPE~~~~~-~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~-~~~~l~~~~~~--~~~~~~~l~~~id 603 (631)
.....|+..|+|||++.++ .++.++||||+||++|||++|+.||........ ........... ....+.++.++++
T Consensus 152 ~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~ 231 (278)
T cd05606 152 PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLE 231 (278)
T ss_pred CcCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHHHHHhhccCCCCCCcCCHHHHHHHH
Confidence 2345789999999998754 689999999999999999999999976432211 11111110001 1112468999999
Q ss_pred hhcCCChhhHH-----hHHHHHH
Q 042825 604 KTIQLDEENLA-----NVSTVAE 621 (631)
Q Consensus 604 ~~L~~d~~~r~-----~~~~vl~ 621 (631)
+++..+|..|+ ++.++++
T Consensus 232 ~~l~~~p~~R~~~~~~~~~~ll~ 254 (278)
T cd05606 232 GLLQRDVNRRLGCLGRGAQEVKE 254 (278)
T ss_pred HHhhcCHHhccCCCCCCHHHHHh
Confidence 99999999999 7777764
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co |
| >KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.77 E-value=6.6e-19 Score=184.39 Aligned_cols=195 Identities=21% Similarity=0.330 Sum_probs=136.6
Q ss_pred cccceeecCCCceEEEEEEecC---C--cEEEEEEEecCCCCHHHHHHHHHHHHHHhc----------------------
Q 042825 420 FSEENRLGRGGVGTVYKGELKD---G--TEVGVKRMELGSVTEQGIAQFESEITVLTK---------------------- 472 (631)
Q Consensus 420 f~~~~~iG~G~fg~Vyk~~~~~---g--~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~---------------------- 472 (631)
....++||+|.||.||+|...+ | .-||||..+.+. +....+.|..|.-+|++
T Consensus 391 Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~-t~d~tekflqEa~iMrnfdHphIikLIGv~~e~P~Wivm 469 (974)
T KOG4257|consen 391 ITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDC-TPDDTEKFLQEASIMRNFDHPHIIKLIGVCVEQPMWIVM 469 (974)
T ss_pred ccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCC-ChhhHHHHHHHHHHHHhCCCcchhheeeeeeccceeEEE
Confidence 4456789999999999998543 2 368999988754 34457899999999987
Q ss_pred -----CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCC
Q 042825 473 -----GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENG 523 (631)
Q Consensus 473 -----gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~ 523 (631)
|.|..+|.. ....|+.......+.+++.+ ..+|++|||++|.+.++.
T Consensus 470 EL~~~GELr~yLq~----nk~sL~l~tL~ly~~Qi~talaYLeSkrfVHRDIAaRNiLVsSp~CVKLaDFGLSR~~ed~~ 545 (974)
T KOG4257|consen 470 ELAPLGELREYLQQ----NKDSLPLRTLTLYCYQICTALAYLESKRFVHRDIAARNILVSSPQCVKLADFGLSRYLEDDA 545 (974)
T ss_pred ecccchhHHHHHHh----ccccchHHHHHHHHHHHHHHHHHHHhhchhhhhhhhhheeecCcceeeecccchhhhccccc
Confidence 667666642 22333333333333333322 567999999999986443
Q ss_pred ccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChHHHHHHHHHhHhh--hcCChhHHH
Q 042825 524 KHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT-GRKVVDATHSDPEYIIHLATWFQKM--HKNHDTFQM 600 (631)
Q Consensus 524 ~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~Ellt-G~~P~~~~~~~~~~~~~l~~~~~~~--~~~~~~l~~ 600 (631)
.. ..+...-++.|||||.+.-++|+.++|||-|||.|||+++ |.+||.+....+ ...++..--+-. ..-.+.+-.
T Consensus 546 yY-kaS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsD-VI~~iEnGeRlP~P~nCPp~LYs 623 (974)
T KOG4257|consen 546 YY-KASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSD-VIGHIENGERLPCPPNCPPALYS 623 (974)
T ss_pred hh-hccccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccccc-eEEEecCCCCCCCCCCCChHHHH
Confidence 33 3335556789999999999999999999999999999998 999998754332 222222211111 112356778
Q ss_pred HHHhhcCCChhhHHhHHHHHH
Q 042825 601 AIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 601 ~id~~L~~d~~~r~~~~~vl~ 621 (631)
+..+|+..+|.+||.+.++-.
T Consensus 624 lmskcWayeP~kRPrftei~~ 644 (974)
T KOG4257|consen 624 LMSKCWAYEPSKRPRFTEIKA 644 (974)
T ss_pred HHHHHhccCcccCCcHHHHHH
Confidence 899999999999988877643
|
|
| >cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha | Back alignment and domain information |
|---|
Probab=99.77 E-value=3.2e-18 Score=179.30 Aligned_cols=197 Identities=17% Similarity=0.221 Sum_probs=133.2
Q ss_pred cceeecCC--CceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc--------------------------
Q 042825 422 EENRLGRG--GVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK-------------------------- 472 (631)
Q Consensus 422 ~~~~iG~G--~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~-------------------------- 472 (631)
..++||+| +|++||+++.+ +|+.||+|++..........+.+.+|+++++.
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~ 81 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFM 81 (327)
T ss_pred hhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEecc
Confidence 35789999 78999999865 68999999997654444455667788887764
Q ss_pred --CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCCcc-
Q 042825 473 --GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENGKH- 525 (631)
Q Consensus 473 --gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~~~- 525 (631)
|++.+++.. .....+++.....++.+++.| +.++++||+.+.........
T Consensus 82 ~~~~l~~~~~~---~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~~~ 158 (327)
T cd08227 82 AYGSAKDLICT---HFMDGMSELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQRL 158 (327)
T ss_pred CCCcHHHHHHh---hccCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCChhhEEEecCCcEEEcccchhhccccccccc
Confidence 555555532 112357888888888888876 34568888765433211110
Q ss_pred ----ccccccccCccccccccccc--CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHhHh---------
Q 042825 526 ----SILTKVAGTFGYLAPEYIVT--GRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQK--------- 590 (631)
Q Consensus 526 ----~~~~~~~gt~~Y~aPE~~~~--~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~~~--------- 590 (631)
.......++..|+|||++.+ ..++.++|||||||++|||++|+.||............+...+..
T Consensus 159 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (327)
T cd08227 159 RVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTTTIPA 238 (327)
T ss_pred cccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHHHHHHhcCCccccccccchhh
Confidence 01122356788999999876 458999999999999999999999997543221111111000000
Q ss_pred -------------------------------------hhcCChhHHHHHHhhcCCChhhHHhHHHHHH
Q 042825 591 -------------------------------------MHKNHDTFQMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 591 -------------------------------------~~~~~~~l~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
....++.+.+++.+|+..||++|+++.++++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~ 306 (327)
T cd08227 239 EELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLN 306 (327)
T ss_pred hhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhc
Confidence 0001246789999999999999999999875
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype |
| >cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Probab=99.77 E-value=3.2e-18 Score=175.40 Aligned_cols=200 Identities=19% Similarity=0.302 Sum_probs=139.6
Q ss_pred CcccceeecCCCceEEEEEEec-----CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc---------------------
Q 042825 419 NFSEENRLGRGGVGTVYKGELK-----DGTEVGVKRMELGSVTEQGIAQFESEITVLTK--------------------- 472 (631)
Q Consensus 419 ~f~~~~~iG~G~fg~Vyk~~~~-----~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~--------------------- 472 (631)
.|...+.||+|+||.||+++.. ++..||+|.++... .....+.+.+|++++++
T Consensus 5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (284)
T cd05079 5 FLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPES-GGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGI 83 (284)
T ss_pred hhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccc-cHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCce
Confidence 4677899999999999999742 47889999986543 23455678999988876
Q ss_pred ---------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeecccccc
Q 042825 473 ---------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLV 519 (631)
Q Consensus 473 ---------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~ 519 (631)
++|.+++. +....++|..+..++.+++.+ +.++|+|||+++.+
T Consensus 84 ~lv~e~~~g~~L~~~l~----~~~~~~~~~~~~~i~~~i~~aL~~lH~~gi~H~dlkp~Nil~~~~~~~~l~dfg~~~~~ 159 (284)
T cd05079 84 KLIMEFLPSGSLKEYLP----RNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAI 159 (284)
T ss_pred EEEEEccCCCCHHHHHH----hccCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccchheEEEcCCCCEEECCCcccccc
Confidence 33333332 223457888888888888765 45789999999876
Q ss_pred CCCCcc-ccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChH-------HHHHHHHHh---
Q 042825 520 PENGKH-SILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPE-------YIIHLATWF--- 588 (631)
Q Consensus 520 ~~~~~~-~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~-------~~~~l~~~~--- 588 (631)
...... .......++..|+|||++.+..++.++|||||||++|||+|++.|......... .......+.
T Consensus 160 ~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (284)
T cd05079 160 ETDKEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRLVRVL 239 (284)
T ss_pred ccCccceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHHHHHHH
Confidence 432211 122345677889999999888899999999999999999998876532111000 000011111
Q ss_pred ------HhhhcCChhHHHHHHhhcCCChhhHHhHHHHHHHH
Q 042825 589 ------QKMHKNHDTFQMAIDKTIQLDEENLANVSTVAELG 623 (631)
Q Consensus 589 ------~~~~~~~~~l~~~id~~L~~d~~~r~~~~~vl~la 623 (631)
......+.++.+++.+|+..+|.+|+++.++++-.
T Consensus 240 ~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l 280 (284)
T cd05079 240 EEGKRLPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGF 280 (284)
T ss_pred HcCccCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHH
Confidence 01112246789999999999999999999988653
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a |
| >cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.77 E-value=8.6e-18 Score=171.63 Aligned_cols=195 Identities=20% Similarity=0.275 Sum_probs=138.9
Q ss_pred cccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc--------------------------
Q 042825 420 FSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK-------------------------- 472 (631)
Q Consensus 420 f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~-------------------------- 472 (631)
|+..+.||+|++|.||+|... +++.+|+|++............+.+|++++++
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~ 80 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEFM 80 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEecc
Confidence 456789999999999999975 68899999987654443445678888887765
Q ss_pred -CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCCcccc
Q 042825 473 -GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENGKHSI 527 (631)
Q Consensus 473 -gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~~~~~ 527 (631)
+++.+++. .....+++.....++.+++.+ +.++|+|||.+....... ..
T Consensus 81 ~~~l~~~l~----~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~--~~ 154 (283)
T cd05118 81 DTDLYKLIK----DRQRGLPESLIKSYLYQLLQGLAFCHSHGILHRDLKPENLLINTEGVLKLADFGLARSFGSPV--RP 154 (283)
T ss_pred CCCHHHHHH----hhcccCCHHHHHHHHHHHHHHHHHHHHCCeeecCcCHHHEEECCCCcEEEeeeeeeEecCCCc--cc
Confidence 23333322 112467888888888888765 457899999998775322 12
Q ss_pred ccccccCcccccccccccC-CCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHH--------hHh--------
Q 042825 528 LTKVAGTFGYLAPEYIVTG-RITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATW--------FQK-------- 590 (631)
Q Consensus 528 ~~~~~gt~~Y~aPE~~~~~-~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~--------~~~-------- 590 (631)
.....++..|+|||.+.+. .++.++||||+|+++|||+||+.||......+. ...+... ...
T Consensus 155 ~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (283)
T cd05118 155 YTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQ-LFKIFRTLGTPDPEVWPKFTSLARNY 233 (283)
T ss_pred ccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHHcCCCchHhcccchhhhhhh
Confidence 2345688899999998776 689999999999999999999999975432111 1111100 000
Q ss_pred ---------------hhcCChhHHHHHHhhcCCChhhHHhHHHHHH
Q 042825 591 ---------------MHKNHDTFQMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 591 ---------------~~~~~~~l~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
....+.++.+++.+|+..||.+|+++.+++.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~ 279 (283)
T cd05118 234 KFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALA 279 (283)
T ss_pred hhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhh
Confidence 0012457889999999999999999998764
|
Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They |
| >cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1 | Back alignment and domain information |
|---|
Probab=99.77 E-value=6.9e-18 Score=177.11 Aligned_cols=202 Identities=20% Similarity=0.253 Sum_probs=135.1
Q ss_pred CcccceeecCCCceEEEEEEec-C--CcEEEEEEEecCCCCHHHHHHHHHHHHHHhcC----ChhHH-------------
Q 042825 419 NFSEENRLGRGGVGTVYKGELK-D--GTEVGVKRMELGSVTEQGIAQFESEITVLTKG----TLGRH------------- 478 (631)
Q Consensus 419 ~f~~~~~iG~G~fg~Vyk~~~~-~--g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~g----sL~~~------------- 478 (631)
+|...+.||+|+||.||+++.. . +..||+|++..........+.+.+|++++.+- ++-..
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~ 80 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNE 80 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCc
Confidence 4777899999999999999965 3 77999999875332223345677888777641 00000
Q ss_pred -----------hHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCC
Q 042825 479 -----------LFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENG 523 (631)
Q Consensus 479 -----------L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~ 523 (631)
|..+. .....+++.....++.+++.| +.+||+|||+++......
T Consensus 81 ~~~~~e~~~~~L~~~l-~~~~~~~~~~~~~~~~qi~~aL~~LH~~givH~dlkp~Nili~~~~~~kl~Dfg~a~~~~~~~ 159 (332)
T cd07857 81 LYLYEELMEADLHQII-RSGQPLTDAHFQSFIYQILCGLKYIHSANVLHRDLKPGNLLVNADCELKICDFGLARGFSENP 159 (332)
T ss_pred EEEEEecccCCHHHHH-hcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHeEEcCCCCEEeCcCCCceeccccc
Confidence 00111 122457788888888887765 457899999998664221
Q ss_pred cc--ccccccccCccccccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHH-----------HHH---
Q 042825 524 KH--SILTKVAGTFGYLAPEYIVT-GRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIH-----------LAT--- 586 (631)
Q Consensus 524 ~~--~~~~~~~gt~~Y~aPE~~~~-~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~-----------l~~--- 586 (631)
.. .......||..|+|||+..+ ..++.++||||+||++|||++|+.||............ +..
T Consensus 160 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (332)
T cd07857 160 GENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPDEETLSRIGS 239 (332)
T ss_pred ccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhCCCCHHHHHhhhh
Confidence 11 11234578999999998765 46899999999999999999999999754321100000 000
Q ss_pred -----Hh------------HhhhcCChhHHHHHHhhcCCChhhHHhHHHHHH
Q 042825 587 -----WF------------QKMHKNHDTFQMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 587 -----~~------------~~~~~~~~~l~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
+. ......+..+.+++.+++..+|.+|+++.++++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~ 291 (332)
T cd07857 240 PKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALE 291 (332)
T ss_pred hhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 00 000112457899999999999999999998764
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co |
| >cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.77 E-value=7.7e-18 Score=177.62 Aligned_cols=199 Identities=18% Similarity=0.277 Sum_probs=138.5
Q ss_pred hhcCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhcCC---hhHH------------
Q 042825 415 NATNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTKGT---LGRH------------ 478 (631)
Q Consensus 415 ~~t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~gs---L~~~------------ 478 (631)
...++|+..+.||+|+||.||+|+.. +++.||||++..........+.+.+|+.++.+-. +-..
T Consensus 12 ~~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 91 (343)
T cd07851 12 EVPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLED 91 (343)
T ss_pred cccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhccccccc
Confidence 35678999999999999999999976 5889999998654333334566778888776511 1100
Q ss_pred --------------hHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccC
Q 042825 479 --------------LFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVP 520 (631)
Q Consensus 479 --------------L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~ 520 (631)
|..+.. ...+++.....++.+++++ +.++|+|||+++...
T Consensus 92 ~~~~~lv~e~~~~~L~~~~~--~~~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nill~~~~~~kL~dfg~~~~~~ 169 (343)
T cd07851 92 FQDVYLVTHLMGADLNNIVK--CQKLSDDHIQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARHTD 169 (343)
T ss_pred cccEEEEEecCCCCHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEcccccccccc
Confidence 111111 1357777777887777765 457899999998653
Q ss_pred CCCccccccccccCcccccccccccC-CCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHH------------
Q 042825 521 ENGKHSILTKVAGTFGYLAPEYIVTG-RITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATW------------ 587 (631)
Q Consensus 521 ~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~------------ 587 (631)
.. .....++..|+|||.+.+. .++.++|||||||++|||++|+.||......... ..+...
T Consensus 170 ~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~~~-~~i~~~~~~~~~~~~~~~ 243 (343)
T cd07851 170 DE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQL-KRIMNLVGTPDEELLQKI 243 (343)
T ss_pred cc-----ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHH-HHHHHhcCCCCHHHHhhc
Confidence 21 2345688899999998653 6789999999999999999999999754322111 111000
Q ss_pred --------h------------HhhhcCChhHHHHHHhhcCCChhhHHhHHHHHH
Q 042825 588 --------F------------QKMHKNHDTFQMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 588 --------~------------~~~~~~~~~l~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
. ......+..+.+++.+|+..+|.+|+++.++++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~ 297 (343)
T cd07851 244 SSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALA 297 (343)
T ss_pred cchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhc
Confidence 0 000123567899999999999999999998765
|
Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK |
| >KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.9e-19 Score=184.94 Aligned_cols=194 Identities=23% Similarity=0.330 Sum_probs=134.9
Q ss_pred ceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc---------------------------CC
Q 042825 423 ENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK---------------------------GT 474 (631)
Q Consensus 423 ~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~---------------------------gs 474 (631)
.++||+|.||+||-|.++ +|+.||||++.+.....++..+..+|+.++.+ |+
T Consensus 569 devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl~GD 648 (888)
T KOG4236|consen 569 DEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKLHGD 648 (888)
T ss_pred HhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhhcch
Confidence 589999999999999865 69999999999887777777889999999987 55
Q ss_pred hhHHhHhhhhc-------------CCCCCCHHHHHHHHHHhhcC-----------CCcEEEeeccccccCCCCccccccc
Q 042825 475 LGRHLFNWEEE-------------GLEPLEWNTRLNIALDVARG-----------DDMRVADFGLVRLVPENGKHSILTK 530 (631)
Q Consensus 475 L~~~L~~~~~~-------------~~~~L~~~~~~~I~~~ia~g-----------~~~kl~DFGla~~~~~~~~~~~~~~ 530 (631)
+-+.+...... ....|.+.|-.+|++=..+. -.+||+|||+||.+.+. .....
T Consensus 649 MLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~knIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEk---sFRrs 725 (888)
T KOG4236|consen 649 MLEMILSSEKGRLPERITKFLVTQILVALRYLHFKNIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEK---SFRRS 725 (888)
T ss_pred HHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhcceeeccCCchheeeccCCCCCceeeccccceeecchh---hhhhh
Confidence 44444321111 11122222323332211111 35799999999998532 34567
Q ss_pred cccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHH--hHhhh-cCChhHHHHHHhhcC
Q 042825 531 VAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATW--FQKMH-KNHDTFQMAIDKTIQ 607 (631)
Q Consensus 531 ~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~--~~~~~-~~~~~l~~~id~~L~ 607 (631)
++||+.|+|||+++.+.|...-|+||.||++|--++|..||....+- .+...-..+ ....| +.+.+..|+|...|+
T Consensus 726 VVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEdEdI-ndQIQNAaFMyPp~PW~eis~~AidlIn~LLq 804 (888)
T KOG4236|consen 726 VVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNEDEDI-NDQIQNAAFMYPPNPWSEISPEAIDLINNLLQ 804 (888)
T ss_pred hcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCccch-hHHhhccccccCCCchhhcCHHHHHHHHHHHH
Confidence 89999999999999999999999999999999999999999743221 111111111 12222 235678899999998
Q ss_pred CChhhHHhHHHHH
Q 042825 608 LDEENLANVSTVA 620 (631)
Q Consensus 608 ~d~~~r~~~~~vl 620 (631)
+.-..|-++.+.+
T Consensus 805 Vkm~kRysvdk~l 817 (888)
T KOG4236|consen 805 VKMRKRYSVDKSL 817 (888)
T ss_pred HHHHHhcchHhhc
Confidence 7767776665543
|
|
| >cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2 | Back alignment and domain information |
|---|
Probab=99.77 E-value=3.3e-18 Score=177.60 Aligned_cols=197 Identities=20% Similarity=0.299 Sum_probs=138.3
Q ss_pred CCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCC-CCHHHHHHHHHHHHHHhc-----------------------
Q 042825 418 NNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGS-VTEQGIAQFESEITVLTK----------------------- 472 (631)
Q Consensus 418 ~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~-~~~~~~~~~~~Ei~~l~~----------------------- 472 (631)
+.|+..+.||+|+||.||+|+.. ++..+|+|.+.... ......+++.+|++++.+
T Consensus 15 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 94 (308)
T cd06634 15 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM 94 (308)
T ss_pred HHHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEE
Confidence 34677789999999999999965 58899999987532 233445678889888865
Q ss_pred ----CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCCc
Q 042825 473 ----GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENGK 524 (631)
Q Consensus 473 ----gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~~ 524 (631)
|++.+.+. .....+++.+...++.+++.+ +.++|+|||++.....
T Consensus 95 e~~~~~l~~~~~----~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~--- 167 (308)
T cd06634 95 EYCLGSASDLLE----VHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP--- 167 (308)
T ss_pred EccCCCHHHHHH----HcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHhEEECCCCcEEECCcccceeecC---
Confidence 33333322 122457777777777777654 4578999999986532
Q ss_pred cccccccccCcccccccccc---cCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHhH-hh--hcCChhH
Q 042825 525 HSILTKVAGTFGYLAPEYIV---TGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQ-KM--HKNHDTF 598 (631)
Q Consensus 525 ~~~~~~~~gt~~Y~aPE~~~---~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~~-~~--~~~~~~l 598 (631)
.....|+..|+|||++. ...++.++|||||||++|||++|+.||....... ....+..... .. ...+..+
T Consensus 168 ---~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 243 (308)
T cd06634 168 ---ANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS-ALYHIAQNESPALQSGHWSEYF 243 (308)
T ss_pred ---cccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHH-HHHHHhhcCCCCcCcccccHHH
Confidence 12356889999999974 3568889999999999999999999987543221 1111111110 10 1123568
Q ss_pred HHHHHhhcCCChhhHHhHHHHHHHHHh
Q 042825 599 QMAIDKTIQLDEENLANVSTVAELGDH 625 (631)
Q Consensus 599 ~~~id~~L~~d~~~r~~~~~vl~lal~ 625 (631)
.+++.+|+..+|.+|+++.++++....
T Consensus 244 ~~li~~cl~~~P~~Rp~~~~ll~~~~~ 270 (308)
T cd06634 244 RNFVDSCLQKIPQDRPTSEVLLKHRFV 270 (308)
T ss_pred HHHHHHHhhCCcccCCCHHHHhhCccc
Confidence 999999999999999999998876543
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin |
| >PHA03390 pk1 serine/threonine-protein kinase 1; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=8.9e-18 Score=170.64 Aligned_cols=197 Identities=15% Similarity=0.194 Sum_probs=137.0
Q ss_pred HHHHHhhcCCcccceee--cCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc--------------
Q 042825 410 IQVLRNATNNFSEENRL--GRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK-------------- 472 (631)
Q Consensus 410 ~~~l~~~t~~f~~~~~i--G~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~-------------- 472 (631)
..++....++|+..+.+ |+|+||.||+++.+ ++..+|+|.+........ +....+ ++.+
T Consensus 6 ~~~~~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~--e~~~~~--~~~~h~~iv~~~~~~~~~ 81 (267)
T PHA03390 6 LSELVQFLKNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNAI--EPMVHQ--LMKDNPNFIKLYYSVTTL 81 (267)
T ss_pred HHHHHHHHHhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcchh--hHHHHH--HhhcCCCEEEEEEEEecC
Confidence 34455556677776766 99999999999865 588999999875432211 111111 1111
Q ss_pred ------------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------C-CcEEEeecc
Q 042825 473 ------------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------D-DMRVADFGL 515 (631)
Q Consensus 473 ------------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~-~~kl~DFGl 515 (631)
++|.+++.. ...++|.....++.++++| + .++|+|||+
T Consensus 82 ~~~~iv~e~~~~~~L~~~l~~-----~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~l~dfg~ 156 (267)
T PHA03390 82 KGHVLIMDYIKDGDLFDLLKK-----EGKLSEAEVKKIIRQLVEALNDLHKHNIIHNDIKLENVLYDRAKDRIYLCDYGL 156 (267)
T ss_pred CeeEEEEEcCCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEeCCCCeEEEecCcc
Confidence 566666632 1378999999999888876 2 688999999
Q ss_pred ccccCCCCccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHhHh----h
Q 042825 516 VRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQK----M 591 (631)
Q Consensus 516 a~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~~~----~ 591 (631)
++..... ....|+..|+|||++.+..++.++|||||||++|||++|+.||............+..-... .
T Consensus 157 ~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (267)
T PHA03390 157 CKIIGTP------SCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLKRQQKKLPFI 230 (267)
T ss_pred ceecCCC------ccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHHHHhhcccCCcc
Confidence 9866311 23468999999999998889999999999999999999999998543322111111111111 1
Q ss_pred hcCChhHHHHHHhhcCCChhhHHh-HHHHHH
Q 042825 592 HKNHDTFQMAIDKTIQLDEENLAN-VSTVAE 621 (631)
Q Consensus 592 ~~~~~~l~~~id~~L~~d~~~r~~-~~~vl~ 621 (631)
...+..+.+++.++|+.+|..|++ +.++++
T Consensus 231 ~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~ 261 (267)
T PHA03390 231 KNVSKNANDFVQSMLKYNINYRLTNYNEIIK 261 (267)
T ss_pred cccCHHHHHHHHHHhccChhhCCchHHHHhc
Confidence 123578899999999999999985 577654
|
|
| >cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Probab=99.76 E-value=2e-18 Score=174.27 Aligned_cols=185 Identities=18% Similarity=0.288 Sum_probs=128.4
Q ss_pred eeecCCCceEEEEEEecC--------CcEEEEEEEecCCCCHHHHHHHHHHHHHHhc-----------------------
Q 042825 424 NRLGRGGVGTVYKGELKD--------GTEVGVKRMELGSVTEQGIAQFESEITVLTK----------------------- 472 (631)
Q Consensus 424 ~~iG~G~fg~Vyk~~~~~--------g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~----------------------- 472 (631)
+.||+|+||.||+|.... ...||+|.+.... ....+++..|+.+++.
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~ 78 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSH--RNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQ 78 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcchh--HHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEE
Confidence 368999999999998642 2348888875432 2344567778777765
Q ss_pred -----CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CC--------cEEEeecc
Q 042825 473 -----GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DD--------MRVADFGL 515 (631)
Q Consensus 473 -----gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~--------~kl~DFGl 515 (631)
|+|.+++.. ....+++..++.++.+++.| +. ++++|||+
T Consensus 79 e~~~~g~L~~~l~~----~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~ 154 (258)
T cd05078 79 EYVKFGSLDTYLKK----NKNLINISWKLEVAKQLAWALHFLEDKGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGI 154 (258)
T ss_pred ecCCCCcHHHHHhc----CCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEecccccccCCCceEEeccccc
Confidence 566666542 22367888888888888876 11 57899999
Q ss_pred ccccCCCCccccccccccCcccccccccccC-CCCchhhHHHHHHHHHHHHcCC-CCCCCCCCChHHHHHHHHHhHh-hh
Q 042825 516 VRLVPENGKHSILTKVAGTFGYLAPEYIVTG-RITAKVDVYSFGMILMDLITGR-KVVDATHSDPEYIIHLATWFQK-MH 592 (631)
Q Consensus 516 a~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~k~DVwS~GvvL~ElltG~-~P~~~~~~~~~~~~~l~~~~~~-~~ 592 (631)
+..... .....++..|+|||++.+. .++.++|||||||++|||++|. .|+...... ........... ..
T Consensus 155 ~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~--~~~~~~~~~~~~~~ 226 (258)
T cd05078 155 SITVLP------KEILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQ--KKLQFYEDRHQLPA 226 (258)
T ss_pred ccccCC------chhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHH--HHHHHHHccccCCC
Confidence 875531 1235688899999998764 5899999999999999999985 555533221 11111111111 11
Q ss_pred cCChhHHHHHHhhcCCChhhHHhHHHHHHH
Q 042825 593 KNHDTFQMAIDKTIQLDEENLANVSTVAEL 622 (631)
Q Consensus 593 ~~~~~l~~~id~~L~~d~~~r~~~~~vl~l 622 (631)
....++.+++.+|++.+|++|+++.++++.
T Consensus 227 ~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 256 (258)
T cd05078 227 PKWTELANLINQCMDYEPDFRPSFRAIIRD 256 (258)
T ss_pred CCcHHHHHHHHHHhccChhhCCCHHHHHHh
Confidence 223578999999999999999999998763
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity |
| >cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.76 E-value=9.7e-18 Score=175.69 Aligned_cols=201 Identities=20% Similarity=0.284 Sum_probs=139.8
Q ss_pred CcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhcCChhH--------------------
Q 042825 419 NFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTKGTLGR-------------------- 477 (631)
Q Consensus 419 ~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~gsL~~-------------------- 477 (631)
+|...+.||+|+||.||+|+.. +++.||||++..........+.+.+|+++++.-+...
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVY 80 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceE
Confidence 4778899999999999999976 4899999998764332344567888888776511000
Q ss_pred --------HhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCCc-
Q 042825 478 --------HLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENGK- 524 (631)
Q Consensus 478 --------~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~~- 524 (631)
.+..+... ...+++.....++.+++.+ +.++|+|||++........
T Consensus 81 lv~e~~~~~l~~~l~~-~~~l~~~~~~~i~~~l~~~l~~LH~~gi~H~dlkp~nili~~~~~~~L~dfg~~~~~~~~~~~ 159 (330)
T cd07834 81 IVTELMETDLHKVIKS-PQPLTDDHIQYFLYQILRGLKYLHSANVIHRDLKPSNILVNSNCDLKICDFGLARGVDPDEDE 159 (330)
T ss_pred EEecchhhhHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEcccCceEeecccccc
Confidence 01111111 2367888888888877765 4678999999987643211
Q ss_pred cccccccccCcccccccccccC-CCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHH-----------------
Q 042825 525 HSILTKVAGTFGYLAPEYIVTG-RITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLAT----------------- 586 (631)
Q Consensus 525 ~~~~~~~~gt~~Y~aPE~~~~~-~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~----------------- 586 (631)
........++..|+|||++.+. .++.++||||||+++|||++|+.||......+. ...+..
T Consensus 160 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~ 238 (330)
T cd07834 160 KGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQ-LNLIVEVLGTPSEEDLKFITSEK 238 (330)
T ss_pred cccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHH-HHHHHHhcCCCChhHhhhccccc
Confidence 0123445688999999999887 789999999999999999999999975432211 011111
Q ss_pred ---Hh------------HhhhcCChhHHHHHHhhcCCChhhHHhHHHHHH
Q 042825 587 ---WF------------QKMHKNHDTFQMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 587 ---~~------------~~~~~~~~~l~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
++ ......+.++.+++.+++..+|.+|+++.++++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~ 288 (330)
T cd07834 239 ARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALA 288 (330)
T ss_pred hhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHh
Confidence 00 001112457889999999999999999998775
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and |
| >cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase | Back alignment and domain information |
|---|
Probab=99.76 E-value=7.1e-18 Score=172.15 Aligned_cols=189 Identities=25% Similarity=0.353 Sum_probs=133.3
Q ss_pred ecCCCceEEEEEEec-CCcEEEEEEEecCCCC-HHHHHHHHHHHHHHhc----------------------------CCh
Q 042825 426 LGRGGVGTVYKGELK-DGTEVGVKRMELGSVT-EQGIAQFESEITVLTK----------------------------GTL 475 (631)
Q Consensus 426 iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~-~~~~~~~~~Ei~~l~~----------------------------gsL 475 (631)
||+|+||+||++... +|+.||+|.+...... ....+.+..|++++.. ++|
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDL 80 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcH
Confidence 689999999999865 5899999998754322 1234566788888866 455
Q ss_pred hHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCCcccccccc
Q 042825 476 GRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENGKHSILTKV 531 (631)
Q Consensus 476 ~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~~~~~~~~~ 531 (631)
.+++.. .....+.+.....++.+++.+ +.++|+|||+++..... ......
T Consensus 81 ~~~l~~---~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~---~~~~~~ 154 (277)
T cd05577 81 KYHIYN---VGEPGFPEARAIFYAAQIICGLEHLHQRRIVYRDLKPENVLLDDHGNVRISDLGLAVELKGG---KKIKGR 154 (277)
T ss_pred HHHHHH---cCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEccCcchhhhccC---Cccccc
Confidence 555532 122357888888777777765 45789999999865321 122345
Q ss_pred ccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHh-----HhhhcCChhHHHHHHhhc
Q 042825 532 AGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWF-----QKMHKNHDTFQMAIDKTI 606 (631)
Q Consensus 532 ~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~-----~~~~~~~~~l~~~id~~L 606 (631)
.++..|+|||+..+..++.++|||||||++|||++|+.||........ ...+.... ......++.+.+++.+++
T Consensus 155 ~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l 233 (277)
T cd05577 155 AGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVE-KEELKRRTLEMAVEYPDKFSPEAKDLCEALL 233 (277)
T ss_pred cCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCccccc-HHHHHhccccccccCCccCCHHHHHHHHHHc
Confidence 678899999999888899999999999999999999999975433111 11111111 011122567899999999
Q ss_pred CCChhhHH-----hHHHHHH
Q 042825 607 QLDEENLA-----NVSTVAE 621 (631)
Q Consensus 607 ~~d~~~r~-----~~~~vl~ 621 (631)
..+|.+|+ ++.++++
T Consensus 234 ~~~p~~R~~~~~~~~~~ll~ 253 (277)
T cd05577 234 QKDPEKRLGCRGGSADEVRE 253 (277)
T ss_pred cCChhHccCCCcccHHHHHh
Confidence 99999999 6666654
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of |
| >KOG0586 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.76 E-value=4.4e-19 Score=187.14 Aligned_cols=205 Identities=18% Similarity=0.259 Sum_probs=157.4
Q ss_pred hhcCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc---------------------
Q 042825 415 NATNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK--------------------- 472 (631)
Q Consensus 415 ~~t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~--------------------- 472 (631)
.....|.....||+|.|++|..+++. ++..||+|.+.+........+.+.+|+++|..
T Consensus 53 ~~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~lyl 132 (596)
T KOG0586|consen 53 NSVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATLYL 132 (596)
T ss_pred ccccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecceeEE
Confidence 34567888999999999999999965 59999999999887777777779999999876
Q ss_pred -------CChhHHhHhhhh-----------cCCCCCCHHHHHHHHHHhhcC--------CCcEEEeeccccccCCCCccc
Q 042825 473 -------GTLGRHLFNWEE-----------EGLEPLEWNTRLNIALDVARG--------DDMRVADFGLVRLVPENGKHS 526 (631)
Q Consensus 473 -------gsL~~~L~~~~~-----------~~~~~L~~~~~~~I~~~ia~g--------~~~kl~DFGla~~~~~~~~~~ 526 (631)
|.+++++....+ +....+++.|...|++...+. +++||+|||++..+.. ..
T Consensus 133 V~eya~~ge~~~yl~~~gr~~e~~ar~~F~q~vsaveYcH~k~ivHrdLk~eNilL~~~mnikIaDfgfS~~~~~---~~ 209 (596)
T KOG0586|consen 133 VMEYASGGELFDYLVKHGRMKEKEARAKFRQIVSAVEYCHSKNIVHRDLKAENILLDENMNIKIADFGFSTFFDY---GL 209 (596)
T ss_pred EEEeccCchhHHHHHhcccchhhhhhhhhHHHHHHHHHHhhcceeccccchhhcccccccceeeeccccceeecc---cc
Confidence 777777754221 112345566666666555554 5689999999988742 23
Q ss_pred cccccccCcccccccccccCCC-CchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHhHhhhcCChhHHHHHHhh
Q 042825 527 ILTKVAGTFGYLAPEYIVTGRI-TAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQKMHKNHDTFQMAIDKT 605 (631)
Q Consensus 527 ~~~~~~gt~~Y~aPE~~~~~~~-~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~id~~ 605 (631)
...+.+|++.|.|||+..+.+| .+++|+||+||++|-|+.|..||++..-.+.....++...+.....+.+++++++++
T Consensus 210 ~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~Lr~rvl~gk~rIp~~ms~dce~lLrk~ 289 (596)
T KOG0586|consen 210 MLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLKELRPRVLRGKYRIPFYMSCDCEDLLRKF 289 (596)
T ss_pred cccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCcccccccchheeeeecccceeechhHHHHHHh
Confidence 4567899999999999999887 578999999999999999999999765443333333333344444467899999999
Q ss_pred cCCChhhHHhHHHHHHH
Q 042825 606 IQLDEENLANVSTVAEL 622 (631)
Q Consensus 606 L~~d~~~r~~~~~vl~l 622 (631)
|..+|..|..+.++++-
T Consensus 290 lvl~Pskr~~~dqim~~ 306 (596)
T KOG0586|consen 290 LVLNPSKRGPCDQIMKD 306 (596)
T ss_pred hccCccccCCHHHhhhh
Confidence 99999999999877653
|
|
| >cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1 | Back alignment and domain information |
|---|
Probab=99.76 E-value=1.1e-17 Score=175.25 Aligned_cols=197 Identities=21% Similarity=0.321 Sum_probs=136.5
Q ss_pred HHhhcCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc-------------------
Q 042825 413 LRNATNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK------------------- 472 (631)
Q Consensus 413 l~~~t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~------------------- 472 (631)
+..++++|+..+.||+|+||.||+++.. +++.||||++..........+.+.+|++++.+
T Consensus 5 ~~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~ 84 (328)
T cd07856 5 VFEITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLED 84 (328)
T ss_pred eeccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCCc
Confidence 4457889999999999999999999865 68999999986543333345677888888765
Q ss_pred ---------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeecccccc
Q 042825 473 ---------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLV 519 (631)
Q Consensus 473 ---------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~ 519 (631)
+++.+++. ...+.+.....++.+++.+ +.++|+|||+++..
T Consensus 85 ~~lv~e~~~~~L~~~~~------~~~~~~~~~~~~~~ql~~aL~~LH~~~iiH~dl~p~Nili~~~~~~~l~dfg~~~~~ 158 (328)
T cd07856 85 IYFVTELLGTDLHRLLT------SRPLEKQFIQYFLYQILRGLKYVHSAGVVHRDLKPSNILINENCDLKICDFGLARIQ 158 (328)
T ss_pred EEEEeehhccCHHHHHh------cCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEeECCCCCEEeCcccccccc
Confidence 22222221 1234555555555555543 45789999999865
Q ss_pred CCCCccccccccccCccccccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHH--------hH-
Q 042825 520 PENGKHSILTKVAGTFGYLAPEYIVT-GRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATW--------FQ- 589 (631)
Q Consensus 520 ~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~--------~~- 589 (631)
.. ......++..|+|||++.+ ..++.++|||||||++|||+||+.||....... ....+.++ ..
T Consensus 159 ~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~-~~~~~~~~~~~~~~~~~~~ 232 (328)
T cd07856 159 DP-----QMTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVN-QFSIITDLLGTPPDDVINT 232 (328)
T ss_pred CC-----CcCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHhCCCCHHHHHh
Confidence 31 1233467889999998765 568999999999999999999999997543211 00111110 00
Q ss_pred -----------------------hhhcCChhHHHHHHhhcCCChhhHHhHHHHHH
Q 042825 590 -----------------------KMHKNHDTFQMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 590 -----------------------~~~~~~~~l~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
.....++.+.++|.+|+..+|++|+++.+++.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~ 287 (328)
T cd07856 233 ICSENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALA 287 (328)
T ss_pred ccchhhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 00112457899999999999999999988764
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U |
| >cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3 | Back alignment and domain information |
|---|
Probab=99.76 E-value=1.7e-17 Score=172.76 Aligned_cols=192 Identities=22% Similarity=0.318 Sum_probs=135.5
Q ss_pred cccceeecCCCceEEEEEEec-CCcEEEEEEEecCCC-CHHHHHHHHHHHHHHhc-------------------------
Q 042825 420 FSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSV-TEQGIAQFESEITVLTK------------------------- 472 (631)
Q Consensus 420 f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~-~~~~~~~~~~Ei~~l~~------------------------- 472 (631)
|...+.||+|+||+||+|+.. +|+.||+|++..... .....+.+.+|++++.+
T Consensus 23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 102 (313)
T cd06633 23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEY 102 (313)
T ss_pred hhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEec
Confidence 555678999999999999865 588999999875432 23344678888888876
Q ss_pred --CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCCccc
Q 042825 473 --GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENGKHS 526 (631)
Q Consensus 473 --gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~~~~ 526 (631)
|++.+.+. .....+.+.+...++.+++.+ +.+||+|||++....
T Consensus 103 ~~~~l~~~l~----~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dl~p~nili~~~~~~kL~dfg~~~~~~------ 172 (313)
T cd06633 103 CLGSASDLLE----VHKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQVKLADFGSASKSS------ 172 (313)
T ss_pred CCCCHHHHHH----hcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChhhEEECCCCCEEEeecCCCcccC------
Confidence 33333321 223467888888888777754 457899999986542
Q ss_pred cccccccCcccccccccc---cCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHH-hHhhh--cCChhHHH
Q 042825 527 ILTKVAGTFGYLAPEYIV---TGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATW-FQKMH--KNHDTFQM 600 (631)
Q Consensus 527 ~~~~~~gt~~Y~aPE~~~---~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~-~~~~~--~~~~~l~~ 600 (631)
......|+..|+|||++. ...++.++|||||||++|||++|+.||......... ..+..- ..... ..+..+.+
T Consensus 173 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~ 251 (313)
T cd06633 173 PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSAL-YHIAQNDSPTLQSNEWTDSFRG 251 (313)
T ss_pred CCCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHH-HHHHhcCCCCCCccccCHHHHH
Confidence 123456899999999974 356889999999999999999999999754322111 111110 00000 11346899
Q ss_pred HHHhhcCCChhhHHhHHHHHHH
Q 042825 601 AIDKTIQLDEENLANVSTVAEL 622 (631)
Q Consensus 601 ~id~~L~~d~~~r~~~~~vl~l 622 (631)
++.++++.+|.+|+++.++++.
T Consensus 252 li~~~l~~~P~~Rp~~~~~l~~ 273 (313)
T cd06633 252 FVDYCLQKIPQERPASAELLRH 273 (313)
T ss_pred HHHHHccCChhhCcCHHHHhcC
Confidence 9999999999999999988753
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co |
| >cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.76 E-value=1.4e-17 Score=169.98 Aligned_cols=195 Identities=25% Similarity=0.344 Sum_probs=136.9
Q ss_pred cccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc--------------------------
Q 042825 420 FSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK-------------------------- 472 (631)
Q Consensus 420 f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~-------------------------- 472 (631)
|+..+.||+|+||.||+|+.. +++.||+|++..........+.+..|++++.+
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~ 80 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEYC 80 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecCc
Confidence 455688999999999999976 48999999997654233334567778877765
Q ss_pred -CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCCcccc
Q 042825 473 -GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENGKHSI 527 (631)
Q Consensus 473 -gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~~~~~ 527 (631)
++|.+++. .....+++..+..++.+++++ +.++|+|||+++...... ..
T Consensus 81 ~~~l~~~i~----~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~--~~ 154 (282)
T cd07829 81 DMDLKKYLD----KRPGPLSPNLIKSIMYQLLRGLAYCHSHRILHRDLKPQNILINRDGVLKLADFGLARAFGIPL--RT 154 (282)
T ss_pred CcCHHHHHH----hhccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChheEEEcCCCCEEEecCCcccccCCCc--cc
Confidence 33333332 111357888888888887765 457899999998764221 12
Q ss_pred ccccccCcccccccccccC-CCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHH---------Hh---------
Q 042825 528 LTKVAGTFGYLAPEYIVTG-RITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLAT---------WF--------- 588 (631)
Q Consensus 528 ~~~~~gt~~Y~aPE~~~~~-~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~---------~~--------- 588 (631)
.....++..|+|||++.+. .++.++|||||||++|||++|+.||....... ....+.. |.
T Consensus 155 ~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (282)
T cd07829 155 YTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEID-QLFKIFQILGTPTEESWPGVTKLPDYK 233 (282)
T ss_pred cCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHH-HHHHHHHHhCCCcHHHHHhhccccccc
Confidence 2334567889999998766 78999999999999999999999997543211 1111111 10
Q ss_pred -------H----h-hhcCChhHHHHHHhhcCCChhhHHhHHHHHH
Q 042825 589 -------Q----K-MHKNHDTFQMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 589 -------~----~-~~~~~~~l~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
. . ......++.+++.+++..+|++|+++.+++.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~ 278 (282)
T cd07829 234 PTFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALK 278 (282)
T ss_pred ccccccCccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhh
Confidence 0 0 0011357899999999999999999998765
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the |
| >cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4 | Back alignment and domain information |
|---|
Probab=99.76 E-value=1e-17 Score=170.67 Aligned_cols=201 Identities=21% Similarity=0.311 Sum_probs=142.9
Q ss_pred CCcccceeecCCCceEEEEEEec------CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc-------------------
Q 042825 418 NNFSEENRLGRGGVGTVYKGELK------DGTEVGVKRMELGSVTEQGIAQFESEITVLTK------------------- 472 (631)
Q Consensus 418 ~~f~~~~~iG~G~fg~Vyk~~~~------~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~------------------- 472 (631)
++|+....||+|+||+||+|+.+ +.+.||+|.+.... .....+++.+|++++.+
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 83 (275)
T cd05046 5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTK-DENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEPH 83 (275)
T ss_pred HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCcc-chHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCcc
Confidence 46788899999999999999864 24679999886532 22245678999988876
Q ss_pred ---------CChhHHhHhhhhcC----CCCCCHHHHHHHHHHhhcC------------------------CCcEEEeecc
Q 042825 473 ---------GTLGRHLFNWEEEG----LEPLEWNTRLNIALDVARG------------------------DDMRVADFGL 515 (631)
Q Consensus 473 ---------gsL~~~L~~~~~~~----~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGl 515 (631)
|+|.+++....... ...+.+..+..++.+++.+ +.++++|||+
T Consensus 84 ~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dlkp~Nili~~~~~~~l~~~~~ 163 (275)
T cd05046 84 YMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNARFVHRDLAARNCLVSSQREVKVSLLSL 163 (275)
T ss_pred eEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcCcccCcCccceEEEeCCCcEEEccccc
Confidence 56666664321110 1258899999988888775 4568999999
Q ss_pred ccccCCCCccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChHHHHHHHH----HhHh
Q 042825 516 VRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT-GRKVVDATHSDPEYIIHLAT----WFQK 590 (631)
Q Consensus 516 a~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~Ellt-G~~P~~~~~~~~~~~~~l~~----~~~~ 590 (631)
++..... .........++..|+|||.+.+..++.++|||||||++|||++ |..||....... ....... |. .
T Consensus 164 ~~~~~~~-~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~~-~~~~~~~~~~~~~-~ 240 (275)
T cd05046 164 SKDVYNS-EYYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDEE-VLNRLQAGKLELP-V 240 (275)
T ss_pred ccccCcc-cccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccchHH-HHHHHHcCCcCCC-C
Confidence 8755321 1112234456788999999988889999999999999999999 888986543221 1111110 11 0
Q ss_pred hhcCChhHHHHHHhhcCCChhhHHhHHHHHHH
Q 042825 591 MHKNHDTFQMAIDKTIQLDEENLANVSTVAEL 622 (631)
Q Consensus 591 ~~~~~~~l~~~id~~L~~d~~~r~~~~~vl~l 622 (631)
....+..+.+++.+|+..+|.+|+++.++++.
T Consensus 241 ~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~ 272 (275)
T cd05046 241 PEGCPSRLYKLMTRCWAVNPKDRPSFSELVSA 272 (275)
T ss_pred CCCCCHHHHHHHHHHcCCCcccCCCHHHHHHH
Confidence 11234678999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s |
| >KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.75 E-value=1.6e-18 Score=172.81 Aligned_cols=209 Identities=18% Similarity=0.187 Sum_probs=151.1
Q ss_pred HHHHHhhcCCcccceeecCCCceEEEEEEecC------CcEEEEEEEecCCCCHHHHHHHHHHHHHHhc-----------
Q 042825 410 IQVLRNATNNFSEENRLGRGGVGTVYKGELKD------GTEVGVKRMELGSVTEQGIAQFESEITVLTK----------- 472 (631)
Q Consensus 410 ~~~l~~~t~~f~~~~~iG~G~fg~Vyk~~~~~------g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~----------- 472 (631)
.+++....+++....++-+|.||.||+|.|.+ .+.|-||.++... ++-+...+..|-..+..
T Consensus 276 ~~~l~v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~A-S~iQv~~~L~es~lly~~sH~nll~V~~ 354 (563)
T KOG1024|consen 276 LQELTVQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHA-SQIQVNLLLQESMLLYGASHPNLLSVLG 354 (563)
T ss_pred HHhhhhhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcc-cHHHHHHHHHHHHHHhcCcCCCccceeE
Confidence 34555556778888899999999999997653 3456677765432 34456677777766654
Q ss_pred ------------------CChhHHhHhhh---hcCCCCCCHHHHHHHHHHhhcC------------------------CC
Q 042825 473 ------------------GTLGRHLFNWE---EEGLEPLEWNTRLNIALDVARG------------------------DD 507 (631)
Q Consensus 473 ------------------gsL~~~L~~~~---~~~~~~L~~~~~~~I~~~ia~g------------------------~~ 507 (631)
|+|..+|.... ......+.-.+...++.|++.+ ..
T Consensus 355 V~ie~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~ViHkDiAaRNCvIdd~Lq 434 (563)
T KOG1024|consen 355 VSIEDYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHGVIHKDIAARNCVIDDQLQ 434 (563)
T ss_pred EEeeccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcCcccchhhhhcceehhhee
Confidence 77888876322 1233456666677777776655 34
Q ss_pred cEEEeeccccccCCCCccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChHHHHHH-H
Q 042825 508 MRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT-GRKVVDATHSDPEYIIHL-A 585 (631)
Q Consensus 508 ~kl~DFGla~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~Ellt-G~~P~~~~~~~~~~~~~l-~ 585 (631)
+||+|-.++|.+.+.+.+..-.....+..||+||.+....|+.++|||||||+||||+| |+.|+-..++. +..++ .
T Consensus 435 VkltDsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeIDPf--Em~~ylk 512 (563)
T KOG1024|consen 435 VKLTDSALSRDLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDPF--EMEHYLK 512 (563)
T ss_pred EEeccchhccccCcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCHH--HHHHHHh
Confidence 68999999998876655544444567889999999999999999999999999999999 99999765433 33332 2
Q ss_pred HH--hHhhhcCChhHHHHHHhhcCCChhhHHhHHHHHH
Q 042825 586 TW--FQKMHKNHDTFQMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 586 ~~--~~~~~~~~~~l~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
+- ......-++++-.+.-.|+...|++||+..++..
T Consensus 513 dGyRlaQP~NCPDeLf~vMacCWallpeeRPsf~Qlv~ 550 (563)
T KOG1024|consen 513 DGYRLAQPFNCPDELFTVMACCWALLPEERPSFSQLVI 550 (563)
T ss_pred ccceecCCCCCcHHHHHHHHHHHhcCcccCCCHHHHHH
Confidence 22 2233344678899999999999999999988753
|
|
| >cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase | Back alignment and domain information |
|---|
Probab=99.75 E-value=1.2e-17 Score=168.75 Aligned_cols=187 Identities=21% Similarity=0.272 Sum_probs=135.4
Q ss_pred ecCCCceEEEEEEec-CCcEEEEEEEecCCCC-HHHHHHHHHHHHHHhc----------------------------CCh
Q 042825 426 LGRGGVGTVYKGELK-DGTEVGVKRMELGSVT-EQGIAQFESEITVLTK----------------------------GTL 475 (631)
Q Consensus 426 iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~-~~~~~~~~~Ei~~l~~----------------------------gsL 475 (631)
||+|+||.||+++.. +++.||+|++...... ....+.+.+|++++.+ ++|
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGEL 80 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcH
Confidence 699999999999976 4899999999764332 2345678889888765 455
Q ss_pred hHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCCcccccccc
Q 042825 476 GRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENGKHSILTKV 531 (631)
Q Consensus 476 ~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~~~~~~~~~ 531 (631)
.+++.. ...+.+.....++.+++.| +.++|+|||+++...... .....
T Consensus 81 ~~~l~~-----~~~l~~~~~~~~~~~i~~~l~~lH~~~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~---~~~~~ 152 (262)
T cd05572 81 WTILRD-----RGLFDEYTARFYIACVVLAFEYLHNRGIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQ---KTWTF 152 (262)
T ss_pred HHHHhh-----cCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEEcCCCCEEEeeCCcccccCccc---ccccc
Confidence 555532 1346777777777777655 467899999998764221 12335
Q ss_pred ccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHh------HhhhcCChhHHHHHHhh
Q 042825 532 AGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWF------QKMHKNHDTFQMAIDKT 605 (631)
Q Consensus 532 ~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~------~~~~~~~~~l~~~id~~ 605 (631)
.|+..|++||.+....++.++|+||+|+++|||++|+.||.....+.... ..... ......++++.+++.++
T Consensus 153 ~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 230 (262)
T cd05572 153 CGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDPMEI--YNDILKGNGKLEFPNYIDKAAKDLIKQL 230 (262)
T ss_pred cCCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCHHHH--HHHHhccCCCCCCCcccCHHHHHHHHHH
Confidence 68899999999988889999999999999999999999998654322111 11111 11111246889999999
Q ss_pred cCCChhhHHh-----HHHHHHH
Q 042825 606 IQLDEENLAN-----VSTVAEL 622 (631)
Q Consensus 606 L~~d~~~r~~-----~~~vl~l 622 (631)
+..+|.+|++ +.++++.
T Consensus 231 l~~~p~~R~~~~~~~~~~l~~~ 252 (262)
T cd05572 231 LRRNPEERLGNLKGGIKDIKKH 252 (262)
T ss_pred ccCChhhCcCCcccCHHHHhcC
Confidence 9999999999 7777663
|
Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi |
| >cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.75 E-value=2.6e-17 Score=168.29 Aligned_cols=194 Identities=22% Similarity=0.330 Sum_probs=133.0
Q ss_pred cccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc--------------------------
Q 042825 420 FSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK-------------------------- 472 (631)
Q Consensus 420 f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~-------------------------- 472 (631)
|...+.||+|+||+||+|+.. +++.||||++....... ......+|+..+.+
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~-~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~ 79 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSW-EECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEY 79 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccch-hHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEec
Confidence 566789999999999999976 48899999986543221 22234456555543
Q ss_pred --CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCCccc
Q 042825 473 --GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENGKHS 526 (631)
Q Consensus 473 --gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~~~~ 526 (631)
|++.+++.. .....+.|.....++.+++.+ +.++|+|||+++......
T Consensus 80 ~~~~l~~~~~~---~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~--- 153 (283)
T cd07830 80 MEGNLYQLMKD---RKGKPFSESVIRSIIYQILQGLAHIHKHGFFHRDLKPENLLVSGPEVVKIADFGLAREIRSRP--- 153 (283)
T ss_pred CCCCHHHHHHh---cccccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcCCCCEEEeecccceeccCCC---
Confidence 344333321 112467888888888888765 457899999998764221
Q ss_pred cccccccCccccccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHH---------Hh--------
Q 042825 527 ILTKVAGTFGYLAPEYIVT-GRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLAT---------WF-------- 588 (631)
Q Consensus 527 ~~~~~~gt~~Y~aPE~~~~-~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~---------~~-------- 588 (631)
......++..|+|||++.. ..++.++||||||++++||++|+.||.......... .+.. |.
T Consensus 154 ~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 232 (283)
T cd07830 154 PYTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLY-KICSVLGTPTKQDWPEGYKLASK 232 (283)
T ss_pred CcCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHH-HHHHhcCCCChhhhhhHhhhhcc
Confidence 1234568899999998754 458999999999999999999999996543221111 0000 00
Q ss_pred -------------Hh-hhcCChhHHHHHHhhcCCChhhHHhHHHHHH
Q 042825 589 -------------QK-MHKNHDTFQMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 589 -------------~~-~~~~~~~l~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
.. ......++.+++.+|+..+|++|+++.+++.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~ 279 (283)
T cd07830 233 LGFRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQ 279 (283)
T ss_pred ccccccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhh
Confidence 00 0112357889999999999999999998765
|
Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili |
| >KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.75 E-value=1.7e-19 Score=203.03 Aligned_cols=209 Identities=21% Similarity=0.279 Sum_probs=139.6
Q ss_pred HHhhcCCcccceeecCCCceEEEEEE-ecCCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc-------------------
Q 042825 413 LRNATNNFSEENRLGRGGVGTVYKGE-LKDGTEVGVKRMELGSVTEQGIAQFESEITVLTK------------------- 472 (631)
Q Consensus 413 l~~~t~~f~~~~~iG~G~fg~Vyk~~-~~~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~------------------- 472 (631)
+...+-++.....||.|.||.||-|. ..+|...|||-++-.....+....+.+|+.++..
T Consensus 1230 lsnV~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv 1309 (1509)
T KOG4645|consen 1230 LSNVTFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKV 1309 (1509)
T ss_pred hccceeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHHH
Confidence 44566778889999999999999998 4569999999887554333344445566555443
Q ss_pred ---------CChhHHhHhh-----------hhcCCCCCCHHHHHHHHHHhhcC--------CCcEEEeeccccccCCCCc
Q 042825 473 ---------GTLGRHLFNW-----------EEEGLEPLEWNTRLNIALDVARG--------DDMRVADFGLVRLVPENGK 524 (631)
Q Consensus 473 ---------gsL~~~L~~~-----------~~~~~~~L~~~~~~~I~~~ia~g--------~~~kl~DFGla~~~~~~~~ 524 (631)
|+|.+.+..- ..+...++.+.|...|++...++ +-+|++|||.|+.+.....
T Consensus 1310 ~IFMEyC~~GsLa~ll~~gri~dE~vt~vyt~qll~gla~LH~~gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~~~ 1389 (1509)
T KOG4645|consen 1310 YIFMEYCEGGSLASLLEHGRIEDEMVTRVYTKQLLEGLAYLHEHGIVHRDIKPANILLDFNGLIKYGDFGSAVKIKNNAQ 1389 (1509)
T ss_pred HHHHHHhccCcHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHhcCceecCCCccceeeecCCcEEeecccceeEecCchh
Confidence 6666655320 01111122222322333322222 5679999999988753321
Q ss_pred --cccccccccCcccccccccccCC---CCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHh-----HhhhcC
Q 042825 525 --HSILTKVAGTFGYLAPEYIVTGR---ITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWF-----QKMHKN 594 (631)
Q Consensus 525 --~~~~~~~~gt~~Y~aPE~~~~~~---~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~-----~~~~~~ 594 (631)
........||+.|||||++.+.+ ...++||||+|||++||+||++||...+.+- ..|.... ..+...
T Consensus 1390 ~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne~---aIMy~V~~gh~Pq~P~~l 1466 (1509)
T KOG4645|consen 1390 TMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNEW---AIMYHVAAGHKPQIPERL 1466 (1509)
T ss_pred cCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccchh---HHHhHHhccCCCCCchhh
Confidence 12344678999999999997654 5678999999999999999999997554332 2222211 111112
Q ss_pred ChhHHHHHHhhcCCChhhHHhHHHHHHHHH
Q 042825 595 HDTFQMAIDKTIQLDEENLANVSTVAELGD 624 (631)
Q Consensus 595 ~~~l~~~id~~L~~d~~~r~~~~~vl~lal 624 (631)
+.+-+++++.||+.||+.|..+.++++.+.
T Consensus 1467 s~~g~dFle~Cl~~dP~~Rw~~~qlle~~f 1496 (1509)
T KOG4645|consen 1467 SSEGRDFLEHCLEQDPKMRWTASQLLEHAF 1496 (1509)
T ss_pred hHhHHHHHHHHHhcCchhhhHHHHHHHhhc
Confidence 456799999999999999999999998765
|
|
| >cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Probab=99.75 E-value=1e-17 Score=168.66 Aligned_cols=184 Identities=18% Similarity=0.291 Sum_probs=129.6
Q ss_pred eeecCCCceEEEEEEecC-C----------cEEEEEEEecCCCCHHHHHHHHHHHHHHhc--------------------
Q 042825 424 NRLGRGGVGTVYKGELKD-G----------TEVGVKRMELGSVTEQGIAQFESEITVLTK-------------------- 472 (631)
Q Consensus 424 ~~iG~G~fg~Vyk~~~~~-g----------~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~-------------------- 472 (631)
+.||+|+||.||+|...+ + ..+++|.+.... .....|.+|+.++++
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~l 77 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDH---RDSLAFFETASLMSQLSHKHLVKLYGVCVRDENIM 77 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccch---hhHHHHHHHHHHHHcCCCcchhheeeEEecCCcEE
Confidence 468999999999999764 3 257788765432 125778888888766
Q ss_pred -------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------C-------CcEEEeec
Q 042825 473 -------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------D-------DMRVADFG 514 (631)
Q Consensus 473 -------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~-------~~kl~DFG 514 (631)
|+|.+++.. ....+++..++.++.+++.| + .+||+|||
T Consensus 78 v~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg 153 (259)
T cd05037 78 VEEYVKFGPLDVFLHR----EKNNVSLHWKLDVAKQLASALHYLEDKKLVHGNVCGKNILVARYGLNEGYVPFIKLSDPG 153 (259)
T ss_pred EEEcCCCCcHHHHHHh----hccCCCHHHHHHHHHHHHHHHHHHhhCCeecccCccceEEEecCccccCCceeEEeCCCC
Confidence 445444432 22267888888888887765 2 47899999
Q ss_pred cccccCCCCccccccccccCcccccccccccC--CCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChHHHHHHHHHhHhh
Q 042825 515 LVRLVPENGKHSILTKVAGTFGYLAPEYIVTG--RITAKVDVYSFGMILMDLIT-GRKVVDATHSDPEYIIHLATWFQKM 591 (631)
Q Consensus 515 la~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~--~~~~k~DVwS~GvvL~Ellt-G~~P~~~~~~~~~~~~~l~~~~~~~ 591 (631)
+++.... .....++..|+|||++... .++.++|||||||++|||++ |..|+......+ ............
T Consensus 154 ~a~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~-~~~~~~~~~~~~ 226 (259)
T cd05037 154 IPITVLS------REERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSE-KERFYQDQHRLP 226 (259)
T ss_pred ccccccc------ccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCchh-HHHHHhcCCCCC
Confidence 9987532 1234567789999998776 78999999999999999999 577776543221 111111111111
Q ss_pred hcCChhHHHHHHhhcCCChhhHHhHHHHHH
Q 042825 592 HKNHDTFQMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 592 ~~~~~~l~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
......+.+++.+++..+|.+|+++.++++
T Consensus 227 ~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 256 (259)
T cd05037 227 MPDCAELANLINQCWTYDPTKRPSFRAILR 256 (259)
T ss_pred CCCchHHHHHHHHHhccChhhCCCHHHHHH
Confidence 122367899999999999999999998876
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki |
| >cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=99.75 E-value=2.1e-17 Score=167.82 Aligned_cols=195 Identities=17% Similarity=0.169 Sum_probs=124.2
Q ss_pred eecCCCceEEEEEEecCC---cEEEEEEEecCCCCHHHHHHHHHHHHHHhc----------------------------C
Q 042825 425 RLGRGGVGTVYKGELKDG---TEVGVKRMELGSVTEQGIAQFESEITVLTK----------------------------G 473 (631)
Q Consensus 425 ~iG~G~fg~Vyk~~~~~g---~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~----------------------------g 473 (631)
.||+|+||.||+|+..++ ..+++|.+.... .....+.|.+|+.++.. |
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~ 80 (268)
T cd05086 2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANA-SSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCELG 80 (268)
T ss_pred cCCCCcCceEEEEEEEcCCCcceEEEEEecCCC-ChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCCC
Confidence 689999999999975443 356677665432 23345778888877654 5
Q ss_pred ChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCCcccccc
Q 042825 474 TLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENGKHSILT 529 (631)
Q Consensus 474 sL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~~~~~~~ 529 (631)
+|.+++.... .......+.....++.++++| ..+||+|||+++............
T Consensus 81 ~L~~~l~~~~-~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~ 159 (268)
T cd05086 81 DLKSYLSQEQ-WHRRNSQLLLLQRMACEIAAGVTHMHKHNFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDYIETED 159 (268)
T ss_pred cHHHHHHhhh-cccccccHHHHHHHHHHHHHHHHHHHHCCeeccCCccceEEEcCCccEEecccccccccCcchhhhccc
Confidence 6766665311 112334555556666666654 457899999986532111111223
Q ss_pred ccccCccccccccccc-------CCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChHHHHHHHHHhHh----h--hcCC
Q 042825 530 KVAGTFGYLAPEYIVT-------GRITAKVDVYSFGMILMDLIT-GRKVVDATHSDPEYIIHLATWFQK----M--HKNH 595 (631)
Q Consensus 530 ~~~gt~~Y~aPE~~~~-------~~~~~k~DVwS~GvvL~Ellt-G~~P~~~~~~~~~~~~~l~~~~~~----~--~~~~ 595 (631)
...++..|+|||++.. ..++.++|||||||++|||++ |..||......+.....+...... . ...+
T Consensus 160 ~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (268)
T cd05086 160 DKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDREVLNHVIKDQQVKLFKPQLELPYS 239 (268)
T ss_pred CCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhhcccccCCCccCCCCc
Confidence 4568899999998743 246789999999999999997 567876433221111111111111 0 1124
Q ss_pred hhHHHHHHhhcCCChhhHHhHHHHHHH
Q 042825 596 DTFQMAIDKTIQLDEENLANVSTVAEL 622 (631)
Q Consensus 596 ~~l~~~id~~L~~d~~~r~~~~~vl~l 622 (631)
+.+.+++..|+ .+|.+||++.++++.
T Consensus 240 ~~~~~l~~~c~-~~P~~Rp~~~~i~~~ 265 (268)
T cd05086 240 ERWYEVLQFCW-LSPEKRATAEEVHRL 265 (268)
T ss_pred HHHHHHHHHHh-hCcccCCCHHHHHHH
Confidence 56788998888 579999999998774
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage |
| >cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1 | Back alignment and domain information |
|---|
Probab=99.75 E-value=2.6e-17 Score=169.10 Aligned_cols=195 Identities=19% Similarity=0.282 Sum_probs=131.7
Q ss_pred CcccceeecCCCceEEEEEEe----cCCcEEEEEEEecCCCC--HHHHHHHHHHHHHHhc--------------------
Q 042825 419 NFSEENRLGRGGVGTVYKGEL----KDGTEVGVKRMELGSVT--EQGIAQFESEITVLTK-------------------- 472 (631)
Q Consensus 419 ~f~~~~~iG~G~fg~Vyk~~~----~~g~~vAvK~l~~~~~~--~~~~~~~~~Ei~~l~~-------------------- 472 (631)
+|+..+.||+|+||.||+++. .+|..||+|++...... ....+++.+|++++.+
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKL 80 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeE
Confidence 467789999999999999985 36889999998753221 1234567788887764
Q ss_pred ---------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeecccccc
Q 042825 473 ---------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLV 519 (631)
Q Consensus 473 ---------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~ 519 (631)
++|.+++.. ...+.+.....++.+++++ +.+||+|||+++..
T Consensus 81 ~lv~e~~~~~~L~~~l~~-----~~~l~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~ 155 (290)
T cd05613 81 HLILDYINGGELFTHLSQ-----RERFKEQEVQIYSGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEF 155 (290)
T ss_pred EEEEecCCCCcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEECCCCCEEEeeCccceec
Confidence 344444421 2346666666666666654 46789999999876
Q ss_pred CCCCccccccccccCcccccccccccC--CCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHhHhh-----h
Q 042825 520 PENGKHSILTKVAGTFGYLAPEYIVTG--RITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQKM-----H 592 (631)
Q Consensus 520 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~--~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~~~~-----~ 592 (631)
.... ........|+..|+|||++... .++.++||||||+++|||++|+.||....... ....+....... .
T Consensus 156 ~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~ 233 (290)
T cd05613 156 HEDE-VERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKN-SQAEISRRILKSEPPYPQ 233 (290)
T ss_pred cccc-ccccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCccc-cHHHHHHHhhccCCCCCc
Confidence 4221 1122345689999999998753 47889999999999999999999996432211 111122211110 1
Q ss_pred cCChhHHHHHHhhcCCChhhHH-----hHHHHH
Q 042825 593 KNHDTFQMAIDKTIQLDEENLA-----NVSTVA 620 (631)
Q Consensus 593 ~~~~~l~~~id~~L~~d~~~r~-----~~~~vl 620 (631)
.....+.+++.+++..+|++|+ .+.+++
T Consensus 234 ~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~ 266 (290)
T cd05613 234 EMSALAKDIIQRLLMKDPKKRLGCGPSDADEIK 266 (290)
T ss_pred cCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHH
Confidence 1235689999999999999996 555554
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph |
| >cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase | Back alignment and domain information |
|---|
Probab=99.75 E-value=2.2e-17 Score=169.51 Aligned_cols=196 Identities=20% Similarity=0.281 Sum_probs=132.6
Q ss_pred CcccceeecCCCceEEEEEEec----CCcEEEEEEEecCCCC--HHHHHHHHHHHHHHhc--------------------
Q 042825 419 NFSEENRLGRGGVGTVYKGELK----DGTEVGVKRMELGSVT--EQGIAQFESEITVLTK-------------------- 472 (631)
Q Consensus 419 ~f~~~~~iG~G~fg~Vyk~~~~----~g~~vAvK~l~~~~~~--~~~~~~~~~Ei~~l~~-------------------- 472 (631)
+|+..+.||+|+||.||+++.. +++.||||.++..... ....+.+.+|++++.+
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~ 80 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKL 80 (288)
T ss_pred CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEE
Confidence 4677899999999999999743 4788999998753221 1234567888887765
Q ss_pred ---------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeecccccc
Q 042825 473 ---------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLV 519 (631)
Q Consensus 473 ---------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~ 519 (631)
|+|.+++.. ...+.+.....++.+++++ +.++|+|||+++..
T Consensus 81 ~lv~e~~~~~~L~~~~~~-----~~~~~~~~~~~~~~ql~~~l~~lH~~~~~H~dl~p~nil~~~~~~~~l~dfg~~~~~ 155 (288)
T cd05583 81 HLILDYVNGGELFTHLYQ-----REHFTESEVRVYIAEIVLALDHLHQLGIIYRDIKLENILLDSEGHVVLTDFGLSKEF 155 (288)
T ss_pred EEEEecCCCCcHHHHHhh-----cCCcCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEEECcccccc
Confidence 233333321 1346677777777676654 35789999999876
Q ss_pred CCCCccccccccccCcccccccccccCC--CCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHh-Hh----hh
Q 042825 520 PENGKHSILTKVAGTFGYLAPEYIVTGR--ITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWF-QK----MH 592 (631)
Q Consensus 520 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~--~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~-~~----~~ 592 (631)
.... ........|+..|+|||...+.. ++.++||||||+++|||++|+.||......... ..+.... .. ..
T Consensus 156 ~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~ 233 (288)
T cd05583 156 LAEE-EERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNSQ-SEISRRILKSKPPFPK 233 (288)
T ss_pred cccc-ccccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccchH-HHHHHHHHccCCCCCc
Confidence 4221 11123356899999999987655 788999999999999999999999643221111 1111111 10 01
Q ss_pred cCChhHHHHHHhhcCCChhhHHhHHHHHH
Q 042825 593 KNHDTFQMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 593 ~~~~~l~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
.....+.+++.+++..+|+.|+++.++.+
T Consensus 234 ~~~~~l~~li~~~l~~~p~~R~t~~~~~~ 262 (288)
T cd05583 234 TMSAEARDFIQKLLEKDPKKRLGANGADE 262 (288)
T ss_pred ccCHHHHHHHHHHhcCCHhhccCcchHHH
Confidence 12467899999999999999998766544
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines |
| >cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins | Back alignment and domain information |
|---|
Probab=99.75 E-value=1.2e-17 Score=168.40 Aligned_cols=189 Identities=20% Similarity=0.308 Sum_probs=133.0
Q ss_pred ecCCCceEEEEEEecC-CcEEEEEEEecCCC-CHHHHHHHHHHHHHHhc----------------------------CCh
Q 042825 426 LGRGGVGTVYKGELKD-GTEVGVKRMELGSV-TEQGIAQFESEITVLTK----------------------------GTL 475 (631)
Q Consensus 426 iG~G~fg~Vyk~~~~~-g~~vAvK~l~~~~~-~~~~~~~~~~Ei~~l~~----------------------------gsL 475 (631)
||+|+||.||+++... |+.+|+|.+..... .....+.+.+|++++.+ ++|
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDL 80 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcH
Confidence 6899999999999874 99999999875432 22345678888887765 344
Q ss_pred hHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCCc------c
Q 042825 476 GRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENGK------H 525 (631)
Q Consensus 476 ~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~~------~ 525 (631)
.+++.. ...+++..+..++.+++.+ +.++|+|||++........ .
T Consensus 81 ~~~l~~-----~~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~ 155 (265)
T cd05579 81 ASLLEN-----VGSLDEDVARIYIAEIVLALEYLHSNGIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDDE 155 (265)
T ss_pred HHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHcCeecCCCCHHHeEEcCCCCEEEEecccchhcccCccccccccc
Confidence 444422 1257888888888888765 4678999999876532211 1
Q ss_pred ccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHH-HhHhhhc--CChhHHHHH
Q 042825 526 SILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLAT-WFQKMHK--NHDTFQMAI 602 (631)
Q Consensus 526 ~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~-~~~~~~~--~~~~l~~~i 602 (631)
.......++..|+|||+.....++.++||||||+++||+++|+.||......+ ....+.. -...... .+..+.+++
T Consensus 156 ~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i 234 (265)
T cd05579 156 KEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPEE-IFQNILNGKIEWPEDVEVSDEAIDLI 234 (265)
T ss_pred ccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHhcCCcCCCccccCCHHHHHHH
Confidence 12234568889999999988889999999999999999999999997553221 1111111 0000011 146789999
Q ss_pred HhhcCCChhhHHhHHHHH
Q 042825 603 DKTIQLDEENLANVSTVA 620 (631)
Q Consensus 603 d~~L~~d~~~r~~~~~vl 620 (631)
.+++..+|.+|+++..+.
T Consensus 235 ~~~l~~~p~~Rpt~~~~~ 252 (265)
T cd05579 235 SKLLVPDPEKRLGAKSIE 252 (265)
T ss_pred HHHhcCCHhhcCCCccHH
Confidence 999999999999994433
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re |
| >cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Probab=99.75 E-value=1.5e-17 Score=168.41 Aligned_cols=184 Identities=15% Similarity=0.228 Sum_probs=127.1
Q ss_pred eeecCCCceEEEEEEecC-------------CcEEEEEEEecCCCCHHHHHHHHHHHHHHhc------------------
Q 042825 424 NRLGRGGVGTVYKGELKD-------------GTEVGVKRMELGSVTEQGIAQFESEITVLTK------------------ 472 (631)
Q Consensus 424 ~~iG~G~fg~Vyk~~~~~-------------g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~------------------ 472 (631)
+.||+|+||.||+|++.. ...||+|.+.... ......|..|+.++..
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~--~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~ 78 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSH--RDISLAFFETASMMRQVSHKHIVLLYGVCVRDVE 78 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhh--hhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCC
Confidence 368999999999998532 2358888875432 2334567778777655
Q ss_pred ----------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------C-------CcEEE
Q 042825 473 ----------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------D-------DMRVA 511 (631)
Q Consensus 473 ----------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~-------~~kl~ 511 (631)
|++..++. .....+++.....++.++++| + .++++
T Consensus 79 ~~lv~e~~~~~~l~~~~~----~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~~~~~~~~~l~ 154 (262)
T cd05077 79 NIMVEEFVEFGPLDLFMH----RKSDVLTTPWKFKVAKQLASALSYLEDKDLVHGNVCTKNILLAREGIDGECGPFIKLS 154 (262)
T ss_pred CEEEEecccCCCHHHHHH----hcCCCCCHHHHHHHHHHHHHHHHHhhhCCeECCCCCcccEEEecCCccCCCCceeEeC
Confidence 34433332 223458888889999888876 1 16789
Q ss_pred eeccccccCCCCccccccccccCcccccccccc-cCCCCchhhHHHHHHHHHHHH-cCCCCCCCCCCChHHHHHHHH-Hh
Q 042825 512 DFGLVRLVPENGKHSILTKVAGTFGYLAPEYIV-TGRITAKVDVYSFGMILMDLI-TGRKVVDATHSDPEYIIHLAT-WF 588 (631)
Q Consensus 512 DFGla~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~~~~k~DVwS~GvvL~Ell-tG~~P~~~~~~~~~~~~~l~~-~~ 588 (631)
|||++..... .....++..|+|||++. +..++.++|||||||++|||+ +|+.|+......+ ...+.. ..
T Consensus 155 d~g~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~--~~~~~~~~~ 226 (262)
T cd05077 155 DPGIPITVLS------RQECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAE--KERFYEGQC 226 (262)
T ss_pred CCCCCccccC------cccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhH--HHHHHhcCc
Confidence 9999876531 12346788999999886 456899999999999999998 5888886543221 111111 01
Q ss_pred HhhhcCChhHHHHHHhhcCCChhhHHhHHHHHH
Q 042825 589 QKMHKNHDTFQMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 589 ~~~~~~~~~l~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
....+..+++.+++.+|+..||.+||++.++++
T Consensus 227 ~~~~~~~~~~~~li~~cl~~dp~~Rp~~~~il~ 259 (262)
T cd05077 227 MLVTPSCKELADLMTHCMNYDPNQRPFFRAIMR 259 (262)
T ss_pred cCCCCChHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 111122367899999999999999999998875
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom |
| >KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.75 E-value=9.1e-19 Score=187.21 Aligned_cols=149 Identities=32% Similarity=0.483 Sum_probs=119.0
Q ss_pred cccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc--------------------------
Q 042825 420 FSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK-------------------------- 472 (631)
Q Consensus 420 f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~-------------------------- 472 (631)
+...+.||+|+||.||+|+.+ .|+.||||.++... ..+.++++.+|+++|++
T Consensus 15 W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~-~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~v 93 (732)
T KOG4250|consen 15 WEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKES-SLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPV 93 (732)
T ss_pred eeehhhhcCCccceeeeecccccccchhHHhhhhhc-ccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccce
Confidence 455689999999999999955 69999999997654 34567889999999988
Q ss_pred --------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC----------------C------------CcEEEeeccc
Q 042825 473 --------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG----------------D------------DMRVADFGLV 516 (631)
Q Consensus 473 --------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g----------------~------------~~kl~DFGla 516 (631)
|+|...|.+ .+...+|.....+.+..+++.| + -+||+|||.|
T Consensus 94 lvmEyC~gGsL~~~L~~--PEN~~GLpE~e~l~lL~d~~~al~~LrEn~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~A 171 (732)
T KOG4250|consen 94 LVMEYCSGGSLRKVLNS--PENAYGLPESEFLDLLSDLVSALRHLRENGIVHRDLKPGNIVLQIGEDGQSIYKLTDFGAA 171 (732)
T ss_pred EEEeecCCCcHHHHhcC--cccccCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEeecCCCceEEeeeccccc
Confidence 667666643 3344567777766666665554 1 2589999999
Q ss_pred cccCCCCccccccccccCccccccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCC
Q 042825 517 RLVPENGKHSILTKVAGTFGYLAPEYIVT-GRITAKVDVYSFGMILMDLITGRKVVDAT 574 (631)
Q Consensus 517 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~k~DVwS~GvvL~ElltG~~P~~~~ 574 (631)
|.+.++ ...+.++||..|.+||.... +.|+..+|.|||||++||++||..||...
T Consensus 172 rel~d~---s~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~ 227 (732)
T KOG4250|consen 172 RELDDN---SLFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPF 227 (732)
T ss_pred ccCCCC---CeeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcC
Confidence 988533 25778999999999999984 78999999999999999999999999743
|
|
| >cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4 | Back alignment and domain information |
|---|
Probab=99.75 E-value=1.5e-17 Score=171.25 Aligned_cols=188 Identities=20% Similarity=0.322 Sum_probs=133.7
Q ss_pred ceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc----------------------------C
Q 042825 423 ENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK----------------------------G 473 (631)
Q Consensus 423 ~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~----------------------------g 473 (631)
...||+|+||.||++..+ +++.||||++.... ......+.+|+.++.+ +
T Consensus 25 ~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~ 102 (292)
T cd06657 25 FIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRK--QQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGG 102 (292)
T ss_pred HHHcCCCCCeEEEEEEEcCCCeEEEEEEecccc--hhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCCCC
Confidence 468999999999999875 68999999986432 2345678889887765 2
Q ss_pred ChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCCcccccc
Q 042825 474 TLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENGKHSILT 529 (631)
Q Consensus 474 sL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~~~~~~~ 529 (631)
++.+++. ...+++.....++.+++.+ +.++|+|||++....... ....
T Consensus 103 ~L~~~~~------~~~~~~~~~~~~~~ql~~~l~~lH~~givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~--~~~~ 174 (292)
T cd06657 103 ALTDIVT------HTRMNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV--PRRK 174 (292)
T ss_pred cHHHHHh------cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEcccccceeccccc--cccc
Confidence 3333221 1246777777777766654 457899999987654221 1223
Q ss_pred ccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHhHh----hhcCChhHHHHHHhh
Q 042825 530 KVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQK----MHKNHDTFQMAIDKT 605 (631)
Q Consensus 530 ~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~~~----~~~~~~~l~~~id~~ 605 (631)
...|+..|+|||+..+..++.++|||||||++|||++|+.||....... ....+...... .......+.+++.+|
T Consensus 175 ~~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~li~~~ 253 (292)
T cd06657 175 SLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLK-AMKMIRDNLPPKLKNLHKVSPSLKGFLDRL 253 (292)
T ss_pred ccccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHhhCCcccCCcccCCHHHHHHHHHH
Confidence 4568999999999988889999999999999999999999997543221 11111111111 112346789999999
Q ss_pred cCCChhhHHhHHHHHH
Q 042825 606 IQLDEENLANVSTVAE 621 (631)
Q Consensus 606 L~~d~~~r~~~~~vl~ 621 (631)
+..+|.+|+++.++++
T Consensus 254 l~~~P~~R~~~~~ll~ 269 (292)
T cd06657 254 LVRDPAQRATAAELLK 269 (292)
T ss_pred HhCCcccCcCHHHHhc
Confidence 9999999999998875
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo |
| >cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6 | Back alignment and domain information |
|---|
Probab=99.75 E-value=1.9e-17 Score=174.58 Aligned_cols=202 Identities=18% Similarity=0.299 Sum_probs=134.8
Q ss_pred CCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc---CChhHHh--------------
Q 042825 418 NNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK---GTLGRHL-------------- 479 (631)
Q Consensus 418 ~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~---gsL~~~L-------------- 479 (631)
.+|...+.||.|+||.||+|+.. +|+.||+|++..... ...+.+.+|++++.+ .++-...
T Consensus 5 ~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~--~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~ 82 (342)
T cd07854 5 SRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDP--QSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDV 82 (342)
T ss_pred cceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCC--chHHHHHHHHHHHHhcCCCcchhhHhhhccccccccccc
Confidence 57889999999999999999965 589999999876542 345667888888765 1111100
Q ss_pred ------------Hhhhhc------CCCCCCHHHHHHHHHHhhcC-------------------------CCcEEEeeccc
Q 042825 480 ------------FNWEEE------GLEPLEWNTRLNIALDVARG-------------------------DDMRVADFGLV 516 (631)
Q Consensus 480 ------------~~~~~~------~~~~L~~~~~~~I~~~ia~g-------------------------~~~kl~DFGla 516 (631)
.++... ....+.+.....++.+++.| ..+|++|||++
T Consensus 83 ~~~~~~~~~~lv~e~~~~~L~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~givH~dikp~Nili~~~~~~~kl~dfg~~ 162 (342)
T cd07854 83 GSLTELNSVYIVQEYMETDLANVLEQGPLSEEHARLFMYQLLRGLKYIHSANVLHRDLKPANVFINTEDLVLKIGDFGLA 162 (342)
T ss_pred ccccccceEEEEeecccccHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcCCCceEEECCcccc
Confidence 000000 01246677777777777765 23689999999
Q ss_pred cccCCCCcc-ccccccccCccccccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHH---------
Q 042825 517 RLVPENGKH-SILTKVAGTFGYLAPEYIVT-GRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLA--------- 585 (631)
Q Consensus 517 ~~~~~~~~~-~~~~~~~gt~~Y~aPE~~~~-~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~--------- 585 (631)
+.+...... .......++..|+|||++.. ..++.++|||||||++|||++|+.||............+.
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 242 (342)
T cd07854 163 RIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLILESVPVVREED 242 (342)
T ss_pred eecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChHH
Confidence 865321111 11123467889999998654 4588899999999999999999999975432211111110
Q ss_pred ---------HHhH------------hhhcCChhHHHHHHhhcCCChhhHHhHHHHHH
Q 042825 586 ---------TWFQ------------KMHKNHDTFQMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 586 ---------~~~~------------~~~~~~~~l~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
.... .....+.++.+++.+||..||.+|+++.++++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~ 299 (342)
T cd07854 243 RNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALM 299 (342)
T ss_pred hhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhC
Confidence 0000 01123456789999999999999999998874
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi |
| >cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11 | Back alignment and domain information |
|---|
Probab=99.75 E-value=1.7e-17 Score=167.48 Aligned_cols=196 Identities=20% Similarity=0.278 Sum_probs=134.8
Q ss_pred CcccceeecCCCceEEEEEEecC-CcEEEEEEEec---CCCCHHHHHHHHHHHHHHhc----------------------
Q 042825 419 NFSEENRLGRGGVGTVYKGELKD-GTEVGVKRMEL---GSVTEQGIAQFESEITVLTK---------------------- 472 (631)
Q Consensus 419 ~f~~~~~iG~G~fg~Vyk~~~~~-g~~vAvK~l~~---~~~~~~~~~~~~~Ei~~l~~---------------------- 472 (631)
+|...+.||+|+||.||+++... +..+++|.++. .........++.+|+.++.+
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 80 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCII 80 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEE
Confidence 46778999999999999998653 44555555543 22222233456667766554
Q ss_pred ------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC-----------------------CCcEEEeeccccccCCCC
Q 042825 473 ------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG-----------------------DDMRVADFGLVRLVPENG 523 (631)
Q Consensus 473 ------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g-----------------------~~~kl~DFGla~~~~~~~ 523 (631)
+++..++..+. .....+++.....++.+++++ +.++|+|||+++......
T Consensus 81 ~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~~l~~~nili~~~~~~l~d~g~~~~~~~~~ 159 (260)
T cd08222 81 TEYCEGRDLDCKLEELK-HTGKTLSENQVCEWFIQLLLGVHYMHQRRILHRDLKAKNIFLKNNLLKIGDFGVSRLLMGSC 159 (260)
T ss_pred EEeCCCCCHHHHHHHHh-hcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCChhheEeecCCEeecccCceeecCCCc
Confidence 45555554321 223467888888888887765 346899999998764221
Q ss_pred ccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHhHhh-----hcCChhH
Q 042825 524 KHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQKM-----HKNHDTF 598 (631)
Q Consensus 524 ~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~~~~-----~~~~~~l 598 (631)
.......|+..|+|||+..+..++.++||||||+++|||++|+.||...... .......... ...+.++
T Consensus 160 --~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~ 233 (260)
T cd08222 160 --DLATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNFL----SVVLRIVEGPTPSLPETYSRQL 233 (260)
T ss_pred --ccccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCccHH----HHHHHHHcCCCCCCcchhcHHH
Confidence 1223456889999999998888999999999999999999999999743221 1111111110 1123578
Q ss_pred HHHHHhhcCCChhhHHhHHHHHH
Q 042825 599 QMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 599 ~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
.+++.+++..+|+.|+++.++++
T Consensus 234 ~~li~~~l~~~p~~Rp~~~~il~ 256 (260)
T cd08222 234 NSIMQSMLNKDPSLRPSAAEILR 256 (260)
T ss_pred HHHHHHHhcCChhhCcCHHHHhh
Confidence 99999999999999999998875
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check |
| >KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.75 E-value=1.3e-17 Score=149.85 Aligned_cols=202 Identities=21% Similarity=0.307 Sum_probs=131.7
Q ss_pred CcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc------CChhHHhHh----------
Q 042825 419 NFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK------GTLGRHLFN---------- 481 (631)
Q Consensus 419 ~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~------gsL~~~L~~---------- 481 (631)
+|+..++||+|.||+||||+.. +++.||+|+++.+...+..-....+||-+++. -.|++.+|.
T Consensus 3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkkltlvfe~ 82 (292)
T KOG0662|consen 3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEF 82 (292)
T ss_pred chHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHHH
Confidence 5677789999999999999955 58999999998765444334556778777765 122222221
Q ss_pred -------hhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCCccccccc
Q 042825 482 -------WEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENGKHSILTK 530 (631)
Q Consensus 482 -------~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~~~~~~~~ 530 (631)
|...-...++......++++..+| +++|++|||+||...-. -.....
T Consensus 83 cdqdlkkyfdslng~~d~~~~rsfmlqllrgl~fchshnvlhrdlkpqnllin~ngelkladfglarafgip--vrcysa 160 (292)
T KOG0662|consen 83 CDQDLKKYFDSLNGDLDPEIVRSFMLQLLRGLGFCHSHNVLHRDLKPQNLLINRNGELKLADFGLARAFGIP--VRCYSA 160 (292)
T ss_pred hhHHHHHHHHhcCCcCCHHHHHHHHHHHHhhhhhhhhhhhhhccCCcceEEeccCCcEEecccchhhhcCCc--eEeeec
Confidence 111111223333333444444444 67899999999987422 123445
Q ss_pred cccCcccccccccccCC-CCchhhHHHHHHHHHHHHc-CCCCCCCCCCChHHHHHHH--------HH-------------
Q 042825 531 VAGTFGYLAPEYIVTGR-ITAKVDVYSFGMILMDLIT-GRKVVDATHSDPEYIIHLA--------TW------------- 587 (631)
Q Consensus 531 ~~gt~~Y~aPE~~~~~~-~~~k~DVwS~GvvL~Ellt-G~~P~~~~~~~~~~~~~l~--------~~------------- 587 (631)
.+-|..|.+|.++-+.+ |+...|+||-||++.|+.. |++-|.+...++....... .|
T Consensus 161 evvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvddqlkrif~~lg~p~ed~wps~t~lpdyk~yp 240 (292)
T KOG0662|consen 161 EVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEDQWPSMTKLPDYKPYP 240 (292)
T ss_pred eeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHHHHhCCCccccCCccccCCCCcccC
Confidence 67799999999998766 8999999999999999997 6666665543322111110 12
Q ss_pred --------hHhhhcCChhHHHHHHhhcCCChhhHHhHHHHHHH
Q 042825 588 --------FQKMHKNHDTFQMAIDKTIQLDEENLANVSTVAEL 622 (631)
Q Consensus 588 --------~~~~~~~~~~l~~~id~~L~~d~~~r~~~~~vl~l 622 (631)
..........-++++.+.+.-+|.+|.++.++++-
T Consensus 241 ~ypattswsqivp~lns~grdllqkll~cnp~qrisaeaalqh 283 (292)
T KOG0662|consen 241 IYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQH 283 (292)
T ss_pred CccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhcC
Confidence 11111222345789999998899999998876653
|
|
| >cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.75 E-value=1.8e-17 Score=167.39 Aligned_cols=186 Identities=20% Similarity=0.314 Sum_probs=127.6
Q ss_pred eeecCCCceEEEEEEec-CCcEEEEEEEecCCCC-HHHHHHHHHHHHHHhc-----------------------------
Q 042825 424 NRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVT-EQGIAQFESEITVLTK----------------------------- 472 (631)
Q Consensus 424 ~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~-~~~~~~~~~Ei~~l~~----------------------------- 472 (631)
+.||+|+||.||+|+.. +|+.||||.+...... ......+..|..++..
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 81 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG 81 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence 56899999999999865 5899999998654321 1222344455444321
Q ss_pred CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCCccccc
Q 042825 473 GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENGKHSIL 528 (631)
Q Consensus 473 gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~~~~~~ 528 (631)
++|.+++.. ...+++.....++.+++.| +.++|+|||+++.... .
T Consensus 82 ~~L~~~l~~-----~~~~~~~~~~~i~~qi~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~------~ 150 (260)
T cd05611 82 GDCASLIKT-----LGGLPEDWAKQYIAEVVLGVEDLHQRGIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLE------N 150 (260)
T ss_pred CCHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCcEEEeecccceeccc------c
Confidence 455554432 2356777777777777765 4578999999986531 2
Q ss_pred cccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHH----HhHhhh-cCChhHHHHHH
Q 042825 529 TKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLAT----WFQKMH-KNHDTFQMAID 603 (631)
Q Consensus 529 ~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~----~~~~~~-~~~~~l~~~id 603 (631)
....|+..|+|||...+..++.++||||||+++|||++|+.||........ ...+.. |..... ..+.++.+++.
T Consensus 151 ~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 229 (260)
T cd05611 151 KKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDAV-FDNILSRRINWPEEVKEFCSPEAVDLIN 229 (260)
T ss_pred ccCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHHHH-HHHHHhcccCCCCcccccCCHHHHHHHH
Confidence 235688999999999888899999999999999999999999975433211 111110 111111 12468899999
Q ss_pred hhcCCChhhHHhHHHHHH
Q 042825 604 KTIQLDEENLANVSTVAE 621 (631)
Q Consensus 604 ~~L~~d~~~r~~~~~vl~ 621 (631)
+++..+|..|+++.++.+
T Consensus 230 ~~l~~~p~~R~~~~~~~~ 247 (260)
T cd05611 230 RLLCMDPAKRLGANGYQE 247 (260)
T ss_pred HHccCCHHHccCCCcHHH
Confidence 999999999996654444
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do |
| >PTZ00024 cyclin-dependent protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=2.4e-17 Score=173.19 Aligned_cols=201 Identities=19% Similarity=0.261 Sum_probs=134.0
Q ss_pred CCcc-cceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHH------------HHHHHHHHHHHHhc-----------
Q 042825 418 NNFS-EENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQ------------GIAQFESEITVLTK----------- 472 (631)
Q Consensus 418 ~~f~-~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~------------~~~~~~~Ei~~l~~----------- 472 (631)
++|. ..+.||+|+||+||+|+.. +++.||||++........ ....+.+|++++.+
T Consensus 8 ~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~ 87 (335)
T PTZ00024 8 ERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVD 87 (335)
T ss_pred cchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeE
Confidence 3454 3477999999999999965 589999999865432210 01246788888765
Q ss_pred ----------------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEe
Q 042825 473 ----------------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVAD 512 (631)
Q Consensus 473 ----------------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~D 512 (631)
|++.+++. ....+.+.+...++.+++.+ +.++|+|
T Consensus 88 ~~~~~~~~~lv~e~~~~~l~~~l~-----~~~~~~~~~~~~~~~ql~~aL~~LH~~~i~H~dl~~~nill~~~~~~kl~d 162 (335)
T PTZ00024 88 VYVEGDFINLVMDIMASDLKKVVD-----RKIRLTESQVKCILLQILNGLNVLHKWYFMHRDLSPANIFINSKGICKIAD 162 (335)
T ss_pred EEecCCcEEEEEeccccCHHHHHH-----hcCCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHeEECCCCCEEECC
Confidence 33333332 12346666677777776654 4578999
Q ss_pred eccccccCCCC------------ccccccccccCcccccccccccC-CCCchhhHHHHHHHHHHHHcCCCCCCCCCCChH
Q 042825 513 FGLVRLVPENG------------KHSILTKVAGTFGYLAPEYIVTG-RITAKVDVYSFGMILMDLITGRKVVDATHSDPE 579 (631)
Q Consensus 513 FGla~~~~~~~------------~~~~~~~~~gt~~Y~aPE~~~~~-~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~ 579 (631)
||+++...... .........++..|+|||++.+. .++.++||||+||++|||++|+.||......+
T Consensus 163 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~- 241 (335)
T PTZ00024 163 FGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENEID- 241 (335)
T ss_pred ccceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-
Confidence 99997653110 01112234578899999998764 47899999999999999999999997553321
Q ss_pred HHHHHHH---------HhHh--------------------hhcCChhHHHHHHhhcCCChhhHHhHHHHHHHHH
Q 042825 580 YIIHLAT---------WFQK--------------------MHKNHDTFQMAIDKTIQLDEENLANVSTVAELGD 624 (631)
Q Consensus 580 ~~~~l~~---------~~~~--------------------~~~~~~~l~~~id~~L~~d~~~r~~~~~vl~lal 624 (631)
....+.. |... ....+.++.+++.+++..+|++|+++.+++...+
T Consensus 242 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~~~~ 315 (335)
T PTZ00024 242 QLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALKHEY 315 (335)
T ss_pred HHHHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHHhcCcc
Confidence 1111111 1100 0112456889999999999999999999886443
|
|
| >KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription] | Back alignment and domain information |
|---|
Probab=99.74 E-value=3.2e-18 Score=166.22 Aligned_cols=207 Identities=21% Similarity=0.271 Sum_probs=133.9
Q ss_pred hcCCcccceeecCCCceEEEEEEecC-----CcEEEEEEEecCCCCHHHHHHHHHHHHHHhc------------------
Q 042825 416 ATNNFSEENRLGRGGVGTVYKGELKD-----GTEVGVKRMELGSVTEQGIAQFESEITVLTK------------------ 472 (631)
Q Consensus 416 ~t~~f~~~~~iG~G~fg~Vyk~~~~~-----g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~------------------ 472 (631)
....|+....||+|.||.|||+.-++ ...+|+|+++.+...........+||..++.
T Consensus 22 ~l~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~ 101 (438)
T KOG0666|consen 22 DLFEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDK 101 (438)
T ss_pred HHHHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCc
Confidence 34578889999999999999996432 2379999997653222222345566665544
Q ss_pred ----------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC----------------------------CCcEEEeec
Q 042825 473 ----------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG----------------------------DDMRVADFG 514 (631)
Q Consensus 473 ----------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g----------------------------~~~kl~DFG 514 (631)
-+|...++-........+.-....+|.-++..| +.+||+|||
T Consensus 102 ~v~l~fdYAEhDL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NWvlHRDLKPaNIlvmgdgperG~VKIaDlG 181 (438)
T KOG0666|consen 102 KVWLLFDYAEHDLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNWVLHRDLKPANILVMGDGPERGRVKIADLG 181 (438)
T ss_pred eEEEEehhhhhhHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhheeeccCCcceEEEeccCCccCeeEeeccc
Confidence 222222221111222345555555666676666 568999999
Q ss_pred cccccCCCCcc-ccccccccCcccccccccccCC-CCchhhHHHHHHHHHHHHcCCCCCCCCCCCh--------------
Q 042825 515 LVRLVPENGKH-SILTKVAGTFGYLAPEYIVTGR-ITAKVDVYSFGMILMDLITGRKVVDATHSDP-------------- 578 (631)
Q Consensus 515 la~~~~~~~~~-~~~~~~~gt~~Y~aPE~~~~~~-~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~-------------- 578 (631)
+||.....-.. .....++-|++|.|||.+.+.+ ||.+.||||.||++.||+|-++-|.+...+.
T Consensus 182 laR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~~Pfq~dQl~rI 261 (438)
T KOG0666|consen 182 LARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTKNPFQHDQLDRI 261 (438)
T ss_pred HHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccchhhhcccCCCchHHHHHHH
Confidence 99987533222 1334578899999999998875 8999999999999999999877775421110
Q ss_pred ------------HHHHH--------------------HHHHhHhhhcCChhHHHHHHhhcCCChhhHHhHHHHHHH
Q 042825 579 ------------EYIIH--------------------LATWFQKMHKNHDTFQMAIDKTIQLDEENLANVSTVAEL 622 (631)
Q Consensus 579 ------------~~~~~--------------------l~~~~~~~~~~~~~l~~~id~~L~~d~~~r~~~~~vl~l 622 (631)
..... +..|+...-..++..-+++.++|..||-.|.++.++++-
T Consensus 262 f~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~~~a~~LL~klL~yDP~kRIta~qAleh 337 (438)
T KOG0666|consen 262 FEVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVKDPSALDLLQKLLTYDPIKRITAEQALEH 337 (438)
T ss_pred HHHcCCCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhcCCCchHHHHHHHHhccCchhhccHHHHhcc
Confidence 00000 111221111122346789999999999999999887753
|
|
| >cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.73 E-value=3.6e-17 Score=163.80 Aligned_cols=187 Identities=21% Similarity=0.292 Sum_probs=132.0
Q ss_pred ecCCCceEEEEEEec-CCcEEEEEEEecCCCC-HHHHHHHHHHHHHHhc----------------------------CCh
Q 042825 426 LGRGGVGTVYKGELK-DGTEVGVKRMELGSVT-EQGIAQFESEITVLTK----------------------------GTL 475 (631)
Q Consensus 426 iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~-~~~~~~~~~Ei~~l~~----------------------------gsL 475 (631)
||+|+||.||++... +++.+|+|.+...... ......+..|++++.+ ++|
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L 80 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGEL 80 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcH
Confidence 699999999999976 4899999998765432 2245678888877765 333
Q ss_pred hHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCCcccccccc
Q 042825 476 GRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENGKHSILTKV 531 (631)
Q Consensus 476 ~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~~~~~~~~~ 531 (631)
.+++.. ...+++.....++.+++.+ +.++|+|||++....... ......
T Consensus 81 ~~~l~~-----~~~l~~~~~~~~~~qi~~~l~~lh~~~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~--~~~~~~ 153 (250)
T cd05123 81 FSHLSK-----EGRFSEERARFYAAEIVLALEYLHSLGIIYRDLKPENILLDADGHIKLTDFGLAKELSSEG--SRTNTF 153 (250)
T ss_pred HHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcceEEEcCCCcEEEeecCcceecccCC--CcccCC
Confidence 333321 1257788777777777765 457899999998764221 123446
Q ss_pred ccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHH-hHhhhcCChhHHHHHHhhcCCCh
Q 042825 532 AGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATW-FQKMHKNHDTFQMAIDKTIQLDE 610 (631)
Q Consensus 532 ~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~-~~~~~~~~~~l~~~id~~L~~d~ 610 (631)
.++..|++||...+..++.++|+||||+++||+++|+.||...... .....+..- .......+.++.+++.+++..||
T Consensus 154 ~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~p 232 (250)
T cd05123 154 CGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDRK-EIYEKILKDPLRFPEFLSPEARDLISGLLQKDP 232 (250)
T ss_pred cCCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHH-HHHHHHhcCCCCCCCCCCHHHHHHHHHHhcCCH
Confidence 7889999999998888999999999999999999999999754321 111111110 00111124678999999999999
Q ss_pred hhHHhH---HHHH
Q 042825 611 ENLANV---STVA 620 (631)
Q Consensus 611 ~~r~~~---~~vl 620 (631)
+.|+++ .+++
T Consensus 233 ~~R~~~~~~~~l~ 245 (250)
T cd05123 233 TKRLGSGGAEEIK 245 (250)
T ss_pred hhCCCcccHHHHH
Confidence 999998 5544
|
Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the |
| >cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=99.73 E-value=2.9e-17 Score=167.53 Aligned_cols=183 Identities=15% Similarity=0.242 Sum_probs=126.3
Q ss_pred eecCCCceEEEEEEecC-------------------------CcEEEEEEEecCCCCHHHHHHHHHHHHHHhc-------
Q 042825 425 RLGRGGVGTVYKGELKD-------------------------GTEVGVKRMELGSVTEQGIAQFESEITVLTK------- 472 (631)
Q Consensus 425 ~iG~G~fg~Vyk~~~~~-------------------------g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~------- 472 (631)
.||+|+||.||+|.+.. ...||+|++.... .....+|..|+++++.
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~--~~~~~~~~~~~~~~~~l~h~niv 79 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSH--RDIALAFFETASLMSQVSHIHLA 79 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHH--HHHHHHHHHHHHHHhcCCCCCee
Confidence 68999999999997521 2358898886432 2234567778777654
Q ss_pred ---------------------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC----------------C---------
Q 042825 473 ---------------------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG----------------D--------- 506 (631)
Q Consensus 473 ---------------------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g----------------~--------- 506 (631)
|+|..++. .....+++..++.++.++++| .
T Consensus 80 ~~~~~~~~~~~~~lv~ey~~~g~L~~~l~----~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~Nill~~~~~ 155 (274)
T cd05076 80 FVHGVCVRGSENIMVEEFVEHGPLDVCLR----KEKGRVPVAWKITVAQQLASALSYLEDKNLVHGNVCAKNILLARLGL 155 (274)
T ss_pred eEEEEEEeCCceEEEEecCCCCcHHHHHH----hcCCCCCHHHHHHHHHHHHHHHHHHHcCCccCCCCCcccEEEeccCc
Confidence 45544443 223457888899999988876 0
Q ss_pred ------CcEEEeeccccccCCCCccccccccccCccccccccccc-CCCCchhhHHHHHHHHHHHH-cCCCCCCCCCCCh
Q 042825 507 ------DMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVT-GRITAKVDVYSFGMILMDLI-TGRKVVDATHSDP 578 (631)
Q Consensus 507 ------~~kl~DFGla~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~k~DVwS~GvvL~Ell-tG~~P~~~~~~~~ 578 (631)
.+|++|||+++.... .....++..|+|||++.+ ..++.++|||||||++|||+ +|+.||......+
T Consensus 156 ~~~~~~~~kl~d~g~~~~~~~------~~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~ 229 (274)
T cd05076 156 AEGTSPFIKLSDPGVSFTALS------REERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSE 229 (274)
T ss_pred ccCccceeeecCCcccccccc------ccccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChHH
Confidence 157889998764421 122357888999998865 56899999999999999994 7999997543321
Q ss_pred HHHHHHHHHhH-hhhcCChhHHHHHHhhcCCChhhHHhHHHHHH
Q 042825 579 EYIIHLATWFQ-KMHKNHDTFQMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 579 ~~~~~l~~~~~-~~~~~~~~l~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
. ........ .......++.+++.+|+..+|++||++.++++
T Consensus 230 ~--~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~il~ 271 (274)
T cd05076 230 K--ERFYEKKHRLPEPSCKELATLISQCLTYEPTQRPSFRTILR 271 (274)
T ss_pred H--HHHHHhccCCCCCCChHHHHHHHHHcccChhhCcCHHHHHH
Confidence 1 11111111 11112357899999999999999999999876
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt |
| >KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=99.73 E-value=1.6e-18 Score=194.46 Aligned_cols=116 Identities=19% Similarity=0.324 Sum_probs=78.7
Q ss_pred CCcEEEeeccccccC----------------CCCccccccccccCcccccccccccC---CCCchhhHHHHHHHHHHHHc
Q 042825 506 DDMRVADFGLVRLVP----------------ENGKHSILTKVAGTFGYLAPEYIVTG---RITAKVDVYSFGMILMDLIT 566 (631)
Q Consensus 506 ~~~kl~DFGla~~~~----------------~~~~~~~~~~~~gt~~Y~aPE~~~~~---~~~~k~DVwS~GvvL~Ellt 566 (631)
..+||+|||+|+... ........+..+||.-|+|||.+.+. +|+.|+|+||+|||++||+.
T Consensus 734 ~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~~~~Yn~KiDmYSLGIVlFEM~y 813 (1351)
T KOG1035|consen 734 NSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTSSNKYNSKIDMYSLGIVLFEMLY 813 (1351)
T ss_pred CCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhcccccccccchhhhHHHHHHHHHHhc
Confidence 578999999998721 00111245678999999999998754 49999999999999999984
Q ss_pred CCCCCCCCCCChHHHHHHHHH--hHh---hhcCChhHHHHHHhhcCCChhhHHhHHHHHHHHH
Q 042825 567 GRKVVDATHSDPEYIIHLATW--FQK---MHKNHDTFQMAIDKTIQLDEENLANVSTVAELGD 624 (631)
Q Consensus 567 G~~P~~~~~~~~~~~~~l~~~--~~~---~~~~~~~l~~~id~~L~~d~~~r~~~~~vl~lal 624 (631)
||....+.......+++- ... ..+..+.-..+|..++..||.+||++.++++-.+
T Consensus 814 ---PF~TsMERa~iL~~LR~g~iP~~~~f~~~~~~~e~slI~~Ll~hdP~kRPtA~eLL~s~l 873 (1351)
T KOG1035|consen 814 ---PFGTSMERASILTNLRKGSIPEPADFFDPEHPEEASLIRWLLSHDPSKRPTATELLNSEL 873 (1351)
T ss_pred ---cCCchHHHHHHHHhcccCCCCCCcccccccchHHHHHHHHHhcCCCccCCCHHHHhhccC
Confidence 576433221111122210 000 1111234578999999999999999999886543
|
|
| >KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.72 E-value=2.3e-18 Score=171.93 Aligned_cols=193 Identities=22% Similarity=0.297 Sum_probs=139.5
Q ss_pred hcCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc----------------------
Q 042825 416 ATNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK---------------------- 472 (631)
Q Consensus 416 ~t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~---------------------- 472 (631)
.+++|.+...+|+|.||.|-++... .+..||||+++.- .+-++...-|++++.+
T Consensus 87 l~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V---~kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyr 163 (415)
T KOG0671|consen 87 LTNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNV---DKYREAALIEIEVLQKINESDPNGKFRCVQMRDWFDYR 163 (415)
T ss_pred cccceehhhhhcCCcccceEEEeecCCCceehHHHHHHH---HHHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhcc
Confidence 3778999999999999999999855 4789999998753 2344566778888766
Q ss_pred ----------C-ChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------------------
Q 042825 473 ----------G-TLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------------------ 505 (631)
Q Consensus 473 ----------g-sL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------------------ 505 (631)
| ++.++|. .....++.-.+...|+.|+.+.
T Consensus 164 ghiCivfellG~S~~dFlk---~N~y~~fpi~~ir~m~~QL~~sv~fLh~~kl~HTDLKPENILfvss~~~~~~~~k~~~ 240 (415)
T KOG0671|consen 164 GHICIVFELLGLSTFDFLK---ENNYIPFPIDHIRHMGYQLLESVAFLHDLKLTHTDLKPENILFVSSEYFKTYNPKKKV 240 (415)
T ss_pred CceEEEEeccChhHHHHhc---cCCccccchHHHHHHHHHHHHHHHHHHhcceeecCCChheEEEeccceEEEeccCCcc
Confidence 2 4444442 2344556666666677666654
Q ss_pred --------CCcEEEeeccccccCCCCccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCC
Q 042825 506 --------DDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSD 577 (631)
Q Consensus 506 --------~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~ 577 (631)
.++||.|||-|+.-.+. ...++.|..|.|||++.+-.++.++||||+||+|.|+.||..-|..-...
T Consensus 241 ~~~r~~ks~~I~vIDFGsAtf~~e~-----hs~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFqtHen~ 315 (415)
T KOG0671|consen 241 CFIRPLKSTAIKVIDFGSATFDHEH-----HSTIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQTHENL 315 (415)
T ss_pred ceeccCCCcceEEEecCCcceeccC-----cceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccceecccCCcH
Confidence 34679999999875422 25678899999999999999999999999999999999999988754322
Q ss_pred hHHHHHHHH--------------------------HhH-------------------hhhc---CChhHHHHHHhhcCCC
Q 042825 578 PEYIIHLAT--------------------------WFQ-------------------KMHK---NHDTFQMAIDKTIQLD 609 (631)
Q Consensus 578 ~~~~~~l~~--------------------------~~~-------------------~~~~---~~~~l~~~id~~L~~d 609 (631)
+ .+.|.+ |.. .+.. +..++-|++.++|..|
T Consensus 316 E--HLaMMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fD 393 (415)
T KOG0671|consen 316 E--HLAMMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFD 393 (415)
T ss_pred H--HHHHHHHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHccC
Confidence 1 111111 110 0000 1235789999999999
Q ss_pred hhhHHhHHHHHH
Q 042825 610 EENLANVSTVAE 621 (631)
Q Consensus 610 ~~~r~~~~~vl~ 621 (631)
|.+|.++.+++.
T Consensus 394 P~~RiTl~EAL~ 405 (415)
T KOG0671|consen 394 PARRITLREALS 405 (415)
T ss_pred ccccccHHHHhc
Confidence 999999998764
|
|
| >KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.72 E-value=3.1e-18 Score=175.79 Aligned_cols=192 Identities=20% Similarity=0.277 Sum_probs=137.3
Q ss_pred CCcccceeecCCCceEEEEEEecCCc-EEEEEEEecCCC-CHHHHHHHHHHHHHHhc-----------------------
Q 042825 418 NNFSEENRLGRGGVGTVYKGELKDGT-EVGVKRMELGSV-TEQGIAQFESEITVLTK----------------------- 472 (631)
Q Consensus 418 ~~f~~~~~iG~G~fg~Vyk~~~~~g~-~vAvK~l~~~~~-~~~~~~~~~~Ei~~l~~----------------------- 472 (631)
.+++....||-|+||.|-.+...... .+|+|.+++..+ ..++.+....|-.+|..
T Consensus 420 ~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvYmLm 499 (732)
T KOG0614|consen 420 SDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVYMLM 499 (732)
T ss_pred hhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhhhhH
Confidence 34455678999999999999876533 489998876433 33445556666666654
Q ss_pred -----CChhHHhHhhh-----------hcCCCCCCHHHHHHHHHHhhcC--------CCcEEEeeccccccCCCCccccc
Q 042825 473 -----GTLGRHLFNWE-----------EEGLEPLEWNTRLNIALDVARG--------DDMRVADFGLVRLVPENGKHSIL 528 (631)
Q Consensus 473 -----gsL~~~L~~~~-----------~~~~~~L~~~~~~~I~~~ia~g--------~~~kl~DFGla~~~~~~~~~~~~ 528 (631)
|.+...|.+.. ....+.+++.||.+|+....+. +-+||.|||+|+.+.... .+
T Consensus 500 EaClGGElWTiLrdRg~Fdd~tarF~~acv~EAfeYLH~k~iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~g~---KT 576 (732)
T KOG0614|consen 500 EACLGGELWTILRDRGSFDDYTARFYVACVLEAFEYLHRKGIIYRDLKPENLLLDNRGYLKLVDFGFAKKIGSGR---KT 576 (732)
T ss_pred HhhcCchhhhhhhhcCCcccchhhhhHHHHHHHHHHHHhcCceeccCChhheeeccCCceEEeehhhHHHhccCC---ce
Confidence 44444443211 0112457888888887665554 567999999999986433 34
Q ss_pred cccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHH-----HHhHhhhcCChhHHHHHH
Q 042825 529 TKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLA-----TWFQKMHKNHDTFQMAID 603 (631)
Q Consensus 529 ~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~-----~~~~~~~~~~~~l~~~id 603 (631)
.+++||+.|+|||++..+.++.++|.||+||++|||++|.+||.+.+....+...+. .|.+. ......++|.
T Consensus 577 wTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpmktYn~ILkGid~i~~Pr~---I~k~a~~Lik 653 (732)
T KOG0614|consen 577 WTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPMKTYNLILKGIDKIEFPRR---ITKTATDLIK 653 (732)
T ss_pred eeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHhhhhhhhcccc---cchhHHHHHH
Confidence 678999999999999999999999999999999999999999998766544433332 23322 3356788999
Q ss_pred hhcCCChhhHHh
Q 042825 604 KTIQLDEENLAN 615 (631)
Q Consensus 604 ~~L~~d~~~r~~ 615 (631)
+..+.+|.+|..
T Consensus 654 ~LCr~~P~ERLG 665 (732)
T KOG0614|consen 654 KLCRDNPTERLG 665 (732)
T ss_pred HHHhcCcHhhhc
Confidence 988888888754
|
|
| >KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.72 E-value=1.3e-17 Score=181.61 Aligned_cols=203 Identities=21% Similarity=0.283 Sum_probs=153.6
Q ss_pred CcCHHHHHhhcCCcccceeecCCCceEEEEEEe-cCCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc-------------
Q 042825 407 AIPIQVLRNATNNFSEENRLGRGGVGTVYKGEL-KDGTEVGVKRMELGSVTEQGIAQFESEITVLTK------------- 472 (631)
Q Consensus 407 ~~~~~~l~~~t~~f~~~~~iG~G~fg~Vyk~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~------------- 472 (631)
.+.++.+...++.|+..++||.|.+|.|||++. ++|+.+|||++.... ...++.+.|.++++.
T Consensus 8 ~~~~~~lpdp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~---d~deEiE~eynil~~~~~hpnv~~fyg~ 84 (953)
T KOG0587|consen 8 DIDLSSLPDPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTE---DEEEEIELEYNMLKKYSHHPNVATFYGA 84 (953)
T ss_pred ccchhhCCCCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCc---cccHHHHHHHHHHHhccCCCCcceEEEE
Confidence 345666667788999999999999999999984 469999999987543 233567777777765
Q ss_pred ---------------------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CC
Q 042825 473 ---------------------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DD 507 (631)
Q Consensus 473 ---------------------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~ 507 (631)
|+..+.+.... ...+.|.....|++++.+| +.
T Consensus 85 ~~k~~~~~~DqLWLVMEfC~gGSVTDLVKn~~---g~rl~E~~IaYI~re~lrgl~HLH~nkviHRDikG~NiLLT~e~~ 161 (953)
T KOG0587|consen 85 FIKKDPGNGDQLWLVMEFCGGGSVTDLVKNTK---GNRLKEEWIAYILREILRGLAHLHNNKVIHRDIKGQNVLLTENAE 161 (953)
T ss_pred EEEecCCCCCeEEEEeeccCCccHHHHHhhhc---ccchhhHHHHHHHHHHHHHHHHHhhcceeeecccCceEEEeccCc
Confidence 67777765432 4568888888888887776 56
Q ss_pred cEEEeeccccccCCCCccccccccccCcccccccccccC-----CCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHH
Q 042825 508 MRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTG-----RITAKVDVYSFGMILMDLITGRKVVDATHSDPEYII 582 (631)
Q Consensus 508 ~kl~DFGla~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-----~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~ 582 (631)
+|+.|||++..+. .+.....+.+||+.|||||++... .|+..+|+||+|++..||.-|.+|+.++.+..
T Consensus 162 VKLvDFGvSaQld--sT~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPmr---- 235 (953)
T KOG0587|consen 162 VKLVDFGVSAQLD--STVGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPMR---- 235 (953)
T ss_pred EEEeeeeeeeeee--cccccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchhh----
Confidence 8999999998773 333445678999999999998643 47889999999999999999999998765432
Q ss_pred HHHHHhHhhhc-------CChhHHHHHHhhcCCChhhHHhHHHHHH
Q 042825 583 HLATWFQKMHK-------NHDTFQMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 583 ~l~~~~~~~~~-------~~~~l~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
.|....+...+ -..++.++|..+|..|-+.||.+.++++
T Consensus 236 aLF~IpRNPPPkLkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~ 281 (953)
T KOG0587|consen 236 ALFLIPRNPPPKLKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLK 281 (953)
T ss_pred hhccCCCCCCccccchhhHHHHHHHHHHHHHhhccccCcchhhhcc
Confidence 22221111111 1257889999999999999999988775
|
|
| >KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.71 E-value=5.2e-18 Score=171.28 Aligned_cols=196 Identities=24% Similarity=0.361 Sum_probs=130.0
Q ss_pred CCcccceeecCCCceEEEEEE-ecCCcEEEEEEEecCCCCHH-----HHHHHHHHHHHHhc-------------------
Q 042825 418 NNFSEENRLGRGGVGTVYKGE-LKDGTEVGVKRMELGSVTEQ-----GIAQFESEITVLTK------------------- 472 (631)
Q Consensus 418 ~~f~~~~~iG~G~fg~Vyk~~-~~~g~~vAvK~l~~~~~~~~-----~~~~~~~Ei~~l~~------------------- 472 (631)
++|-..++||+|+|+.|||+. +...+-||||+-........ -.+...+|..+.+.
T Consensus 463 ~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDtds 542 (775)
T KOG1151|consen 463 DRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDTDS 542 (775)
T ss_pred HHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeecccc
Confidence 456678999999999999998 45678899997543321111 12334566666554
Q ss_pred ----------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC-----------------------------CCcEEEee
Q 042825 473 ----------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG-----------------------------DDMRVADF 513 (631)
Q Consensus 473 ----------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g-----------------------------~~~kl~DF 513 (631)
.+|.-+|. ....++......|+++|..+ +.+||+||
T Consensus 543 FCTVLEYceGNDLDFYLK-----QhklmSEKEARSIiMQiVnAL~YLNEikpPIIHYDLKPgNILLv~GtacGeIKITDF 617 (775)
T KOG1151|consen 543 FCTVLEYCEGNDLDFYLK-----QHKLMSEKEARSIIMQIVNALKYLNEIKPPIIHYDLKPGNILLVNGTACGEIKITDF 617 (775)
T ss_pred ceeeeeecCCCchhHHHH-----hhhhhhHHHHHHHHHHHHHHHHHHhccCCCeeeeccCCccEEEecCcccceeEeeec
Confidence 12222221 11234555566777777655 67899999
Q ss_pred ccccccCCCCcc-----ccccccccCcccccccccccC----CCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHH-
Q 042825 514 GLVRLVPENGKH-----SILTKVAGTFGYLAPEYIVTG----RITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIH- 583 (631)
Q Consensus 514 Gla~~~~~~~~~-----~~~~~~~gt~~Y~aPE~~~~~----~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~- 583 (631)
|+++.+..+... ..+....||.+|++||++.-+ +.+.|+||||.||++|.++.|++||....... +...
T Consensus 618 GLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQQ-dILqe 696 (775)
T KOG1151|consen 618 GLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQ-DILQE 696 (775)
T ss_pred chhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhHH-HHHhh
Confidence 999998644332 234557899999999998644 47889999999999999999999997543221 1111
Q ss_pred --HHH--HhHhh--hcCChhHHHHHHhhcCCChhhHHhHHHH
Q 042825 584 --LAT--WFQKM--HKNHDTFQMAIDKTIQLDEENLANVSTV 619 (631)
Q Consensus 584 --l~~--~~~~~--~~~~~~l~~~id~~L~~d~~~r~~~~~v 619 (631)
+.. .+... ...+.+.+++|++||.+..++|..+.++
T Consensus 697 NTIlkAtEVqFP~KPvVsseAkaFIRRCLaYRKeDR~DV~qL 738 (775)
T KOG1151|consen 697 NTILKATEVQFPPKPVVSSEAKAFIRRCLAYRKEDRIDVQQL 738 (775)
T ss_pred hchhcceeccCCCCCccCHHHHHHHHHHHHhhhhhhhhHHHH
Confidence 100 11111 1124678999999999888888776554
|
|
| >cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein | Back alignment and domain information |
|---|
Probab=99.71 E-value=1.1e-16 Score=166.29 Aligned_cols=195 Identities=17% Similarity=0.189 Sum_probs=128.5
Q ss_pred ceeecCCCceEEEEEEecCCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc----------------------------CC
Q 042825 423 ENRLGRGGVGTVYKGELKDGTEVGVKRMELGSVTEQGIAQFESEITVLTK----------------------------GT 474 (631)
Q Consensus 423 ~~~iG~G~fg~Vyk~~~~~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~----------------------------gs 474 (631)
.+.+|.|+++.||++.. +++.||||++..........+.+.+|+++++. |+
T Consensus 7 ~~~~~~~~~v~~~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~ 85 (314)
T cd08216 7 GKCFEDLMIVHLAKHKP-TNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYGS 85 (314)
T ss_pred hHhhcCCceEEEEEecC-CCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCCC
Confidence 34445555655665554 68999999998764455567789999988866 44
Q ss_pred hhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCCc-----c
Q 042825 475 LGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENGK-----H 525 (631)
Q Consensus 475 L~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~~-----~ 525 (631)
+.+++... ....++......++.+++.| +.+||+|||.+........ .
T Consensus 86 l~~~l~~~---~~~~~~~~~~~~~~~~l~~~L~~LH~~~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~~~~ 162 (314)
T cd08216 86 CEDLLKTH---FPEGLPELAIAFILKDVLNALDYIHSKGFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQRVVH 162 (314)
T ss_pred HHHHHHHh---cccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCcceEEEecCCceEEecCccceeeccccccccccc
Confidence 55544321 12346666777777777665 4578999999875532211 0
Q ss_pred ccccccccCcccccccccccC--CCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHhHh-------------
Q 042825 526 SILTKVAGTFGYLAPEYIVTG--RITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQK------------- 590 (631)
Q Consensus 526 ~~~~~~~gt~~Y~aPE~~~~~--~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~~~------------- 590 (631)
.......++..|+|||++... .++.++|||||||++|||++|+.||............+......
T Consensus 163 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (314)
T cd08216 163 DFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQMLLEKVRGTVPCLLDKSTYPLYEDS 242 (314)
T ss_pred cccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCccccccCchhhhcCC
Confidence 112334678899999998653 58899999999999999999999997543221111111000000
Q ss_pred -------------------h--hcCChhHHHHHHhhcCCChhhHHhHHHHHH
Q 042825 591 -------------------M--HKNHDTFQMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 591 -------------------~--~~~~~~l~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
. ...+.++.+++..||..+|++|+++.++++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~ 294 (314)
T cd08216 243 MSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLN 294 (314)
T ss_pred cCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhc
Confidence 0 000145778999999999999999998875
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc |
| >KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.71 E-value=3.5e-18 Score=190.27 Aligned_cols=201 Identities=20% Similarity=0.285 Sum_probs=133.9
Q ss_pred HHHHHhhcCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCC-HHHHHHHHHHHHHHhcCC-------------
Q 042825 410 IQVLRNATNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVT-EQGIAQFESEITVLTKGT------------- 474 (631)
Q Consensus 410 ~~~l~~~t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~-~~~~~~~~~Ei~~l~~gs------------- 474 (631)
..+++-..++|.+.++||+|+||.|..++++ +++.+|.|++.+-.+. .....-|..|-++|..|+
T Consensus 67 v~~lrl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD 146 (1317)
T KOG0612|consen 67 VKELRLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQD 146 (1317)
T ss_pred HHHHhCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcC
Confidence 4456666789999999999999999999976 5899999999763322 223455777777777644
Q ss_pred ---------------hhHHhHhhhhcCCCCCCHHHHH----HHHHHhhc------------------CCCcEEEeecccc
Q 042825 475 ---------------LGRHLFNWEEEGLEPLEWNTRL----NIALDVAR------------------GDDMRVADFGLVR 517 (631)
Q Consensus 475 ---------------L~~~L~~~~~~~~~~L~~~~~~----~I~~~ia~------------------g~~~kl~DFGla~ 517 (631)
|-..+..+. .-+=+|..-+ -+|++..+ .+++|++|||-+-
T Consensus 147 ~~~LYlVMdY~pGGDlltLlSk~~---~~pE~~ArFY~aEiVlAldslH~mgyVHRDiKPDNvLld~~GHikLADFGsCl 223 (1317)
T KOG0612|consen 147 ERYLYLVMDYMPGGDLLTLLSKFD---RLPEDWARFYTAEIVLALDSLHSMGYVHRDIKPDNVLLDKSGHIKLADFGSCL 223 (1317)
T ss_pred ccceEEEEecccCchHHHHHhhcC---CChHHHHHHHHHHHHHHHHHHHhccceeccCCcceeEecccCcEeeccchhHH
Confidence 333332211 1122343221 11222111 1789999999987
Q ss_pred ccCCCCccccccccccCcccccccccc----c-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHH--HhH-
Q 042825 518 LVPENGKHSILTKVAGTFGYLAPEYIV----T-GRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLAT--WFQ- 589 (631)
Q Consensus 518 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~----~-~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~--~~~- 589 (631)
.+..++ .......+|||-|++||++. + +.|+..+|+||+||++|||+.|..||+...-.+.+...+.. -..
T Consensus 224 km~~dG-~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYadslveTY~KIm~hk~~l~F 302 (1317)
T KOG0612|consen 224 KMDADG-TVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADSLVETYGKIMNHKESLSF 302 (1317)
T ss_pred hcCCCC-cEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHHHHHHHHHHhchhhhcCC
Confidence 775333 33455678999999999985 2 56999999999999999999999999865433323222221 111
Q ss_pred -hhhcCChhHHHHHHhhcCCChhhHHh
Q 042825 590 -KMHKNHDTFQMAIDKTIQLDEENLAN 615 (631)
Q Consensus 590 -~~~~~~~~l~~~id~~L~~d~~~r~~ 615 (631)
.-...+++.+++|...+. +++.|..
T Consensus 303 P~~~~VSeeakdLI~~ll~-~~e~RLg 328 (1317)
T KOG0612|consen 303 PDETDVSEEAKDLIEALLC-DREVRLG 328 (1317)
T ss_pred CcccccCHHHHHHHHHHhc-Chhhhcc
Confidence 112346788999999884 6666654
|
|
| >PLN03225 Serine/threonine-protein kinase SNT7; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=1.8e-17 Score=184.70 Aligned_cols=205 Identities=15% Similarity=0.186 Sum_probs=119.9
Q ss_pred hcCCcccceeecCCCceEEEEEEec-C----CcEEEEEEEecCCCCHHHH-HHHHHH--------HH-------------
Q 042825 416 ATNNFSEENRLGRGGVGTVYKGELK-D----GTEVGVKRMELGSVTEQGI-AQFESE--------IT------------- 468 (631)
Q Consensus 416 ~t~~f~~~~~iG~G~fg~Vyk~~~~-~----g~~vAvK~l~~~~~~~~~~-~~~~~E--------i~------------- 468 (631)
..++|+..+.||+|+||.||+|++. + +..||||++......+... ++..+. +.
T Consensus 130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~~e~~~~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (566)
T PLN03225 130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGAVEIWMNERVRRACPNSCADFVYGFLEPVSSKKEDE 209 (566)
T ss_pred ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccchhHHHHHHHHHhhchhhHHHHHHhhhcccccccCCc
Confidence 5678999999999999999999975 4 6899999986432111000 001000 00
Q ss_pred ------HHhcCChhHHhHhhh---------hcCCCC------CCHHHHHHHHHHhhcC----------------------
Q 042825 469 ------VLTKGTLGRHLFNWE---------EEGLEP------LEWNTRLNIALDVARG---------------------- 505 (631)
Q Consensus 469 ------~l~~gsL~~~L~~~~---------~~~~~~------L~~~~~~~I~~~ia~g---------------------- 505 (631)
....++|.+++.... ...... ........|+.+++.|
T Consensus 210 ~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~gIiHRDLKP~NILl~ 289 (566)
T PLN03225 210 YWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTGIVHRDVKPQNIIFS 289 (566)
T ss_pred eEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCCEEeCcCCHHHEEEe
Confidence 011155655553210 000000 0111122344444443
Q ss_pred ---CCcEEEeeccccccCCCCccccccccccCcccccccccccC----------------------CCCchhhHHHHHHH
Q 042825 506 ---DDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTG----------------------RITAKVDVYSFGMI 560 (631)
Q Consensus 506 ---~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~----------------------~~~~k~DVwS~Gvv 560 (631)
+.+||+|||+|+.+... .........+++.|||||.+... .++.++|||||||+
T Consensus 290 ~~~~~~KL~DFGlA~~l~~~-~~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~DVwSlGvi 368 (566)
T PLN03225 290 EGSGSFKIIDLGAAADLRVG-INYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFDIYSAGLI 368 (566)
T ss_pred CCCCcEEEEeCCCccccccc-cccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCcccHHHHHH
Confidence 35799999999876422 22233457899999999965322 24456799999999
Q ss_pred HHHHHcCCCCCCCCCCChHH-----HHHHHHHhHhhhcC---------------ChhHHHHHHhhcCCChhhHHhHHHHH
Q 042825 561 LMDLITGRKVVDATHSDPEY-----IIHLATWFQKMHKN---------------HDTFQMAIDKTIQLDEENLANVSTVA 620 (631)
Q Consensus 561 L~ElltG~~P~~~~~~~~~~-----~~~l~~~~~~~~~~---------------~~~l~~~id~~L~~d~~~r~~~~~vl 620 (631)
||||+++..|++........ ...+..|....... .....++|++||..||.+|+++.+++
T Consensus 369 L~el~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~~mL~~dP~kR~ta~e~L 448 (566)
T PLN03225 369 FLQMAFPNLRSDSNLIQFNRQLKRNDYDLVAWRKLVEPRASPDLRRGFEVLDLDGGAGWELLKSMMRFKGRQRISAKAAL 448 (566)
T ss_pred HHHHHhCcCCCchHHHHHHHHHHhcCCcHHHHHHhhccccchhhhhhhhhccccchHHHHHHHHHccCCcccCCCHHHHh
Confidence 99999987776532100000 00122332221111 11234899999999999999999987
Q ss_pred H
Q 042825 621 E 621 (631)
Q Consensus 621 ~ 621 (631)
+
T Consensus 449 ~ 449 (566)
T PLN03225 449 A 449 (566)
T ss_pred C
Confidence 5
|
|
| >KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.70 E-value=4.3e-17 Score=150.02 Aligned_cols=154 Identities=24% Similarity=0.372 Sum_probs=105.1
Q ss_pred CCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc-----------C------------
Q 042825 418 NNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK-----------G------------ 473 (631)
Q Consensus 418 ~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~-----------g------------ 473 (631)
++......||+|+||.|-|-++. +|+..|||+++.. ...+..++..+|+.+..+ |
T Consensus 46 d~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~t-vn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdvwIcM 124 (282)
T KOG0984|consen 46 DDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRAT-VNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDVWICM 124 (282)
T ss_pred hhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhh-cChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccEEEeH
Confidence 34445688999999999998854 7999999999764 345667788889888766 1
Q ss_pred -----ChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC-------------------------CCcEEEeeccccccCCCC
Q 042825 474 -----TLGRHLFNWEEEGLEPLEWNTRLNIALDVARG-------------------------DDMRVADFGLVRLVPENG 523 (631)
Q Consensus 474 -----sL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g-------------------------~~~kl~DFGla~~~~~~~ 523 (631)
++..+..+....+ ..+...-.=+||+.+.++ +.+|+||||++..+.+.
T Consensus 125 E~M~tSldkfy~~v~~~g-~~ipE~vlGkIa~Svv~al~~L~~kL~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~L~dS- 202 (282)
T KOG0984|consen 125 ELMDTSLDKFYRKVLKKG-GTIPEDVLGKIAVSVVHALEFLHSKLSVIHRDVKPSNILINYDGQVKICDFGISGYLVDS- 202 (282)
T ss_pred HHhhhhHHHHHHHHHhcC-CcCchHHhhHhHHHHHHHHHHHHHHhhhhhccCCcceEEEccCCcEEEcccccceeehhh-
Confidence 2222221111111 112222222333332222 77899999999887421
Q ss_pred ccccccccccCccccccccccc----CCCCchhhHHHHHHHHHHHHcCCCCCCCCCC
Q 042825 524 KHSILTKVAGTFGYLAPEYIVT----GRITAKVDVYSFGMILMDLITGRKVVDATHS 576 (631)
Q Consensus 524 ~~~~~~~~~gt~~Y~aPE~~~~----~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~ 576 (631)
...+...|...|||||.+.. ..|+-|+||||+|+.+.||.+++.||+....
T Consensus 203 --iAkt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w~t 257 (282)
T KOG0984|consen 203 --IAKTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESWGT 257 (282)
T ss_pred --hHHHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccccCC
Confidence 12233568889999999863 3699999999999999999999999986544
|
|
| >cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta | Back alignment and domain information |
|---|
Probab=99.69 E-value=3.7e-16 Score=163.75 Aligned_cols=195 Identities=21% Similarity=0.298 Sum_probs=128.6
Q ss_pred eeecCC--CceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc----------------------------
Q 042825 424 NRLGRG--GVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK---------------------------- 472 (631)
Q Consensus 424 ~~iG~G--~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~---------------------------- 472 (631)
..||+| +||+||+++.. +|+.||||.+..........+.+.+|+.++..
T Consensus 4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~~ 83 (328)
T cd08226 4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMAY 83 (328)
T ss_pred HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEecccC
Confidence 456666 99999999975 69999999987665555566788888887764
Q ss_pred CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCCccc--
Q 042825 473 GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENGKHS-- 526 (631)
Q Consensus 473 gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~~~~-- 526 (631)
+++.+++... ....+++.....++.+++.+ +.++++||+.+..........
T Consensus 84 ~~l~~~l~~~---~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (328)
T cd08226 84 GSANSLLKTY---FPEGMSEALIGNILFGALRGLNYLHQNGYIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKAKV 160 (328)
T ss_pred CCHHHHHHhh---cccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEeCCCcEEEechHHHhhhhccCccccc
Confidence 3455544321 12346777777777777765 346788887654332111100
Q ss_pred ---cccccccCcccccccccccC--CCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHH---------------
Q 042825 527 ---ILTKVAGTFGYLAPEYIVTG--RITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLAT--------------- 586 (631)
Q Consensus 527 ---~~~~~~gt~~Y~aPE~~~~~--~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~--------------- 586 (631)
......++..|+|||++.+. .++.++|||||||++|||++|+.||............+..
T Consensus 161 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (328)
T cd08226 161 VYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQKLKGPPYSPLDITTFPCEE 240 (328)
T ss_pred cccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHHHhcCCCCCCccccccchhh
Confidence 01112356779999998764 4789999999999999999999999754322111000000
Q ss_pred ------------------------------HhH--hhhcCChhHHHHHHhhcCCChhhHHhHHHHHH
Q 042825 587 ------------------------------WFQ--KMHKNHDTFQMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 587 ------------------------------~~~--~~~~~~~~l~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
+.. .....+.++.+++.+|+..||++|+++.++++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~ 307 (328)
T cd08226 241 SRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLS 307 (328)
T ss_pred hhhccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhh
Confidence 000 00012346889999999999999999999875
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig |
| >KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.69 E-value=2e-17 Score=159.97 Aligned_cols=196 Identities=18% Similarity=0.213 Sum_probs=133.8
Q ss_pred hcCCcccc-eeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHH-----------------------
Q 042825 416 ATNNFSEE-NRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVL----------------------- 470 (631)
Q Consensus 416 ~t~~f~~~-~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l----------------------- 470 (631)
.|++|.+. ++||-|-.|.|-.+..+ +|+.+|+|++... .+ ..+|++..
T Consensus 59 itedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds---~K----ARrEVeLHw~~s~h~~iV~IidVyeNs~~~r 131 (400)
T KOG0604|consen 59 ITEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDS---PK----ARREVELHWMASGHPHIVSIIDVYENSYQGR 131 (400)
T ss_pred chhhheehhhhhccccCCceEEEEeccchhhhHHHHHhcC---HH----HHhHhhhhhhhcCCCceEEeehhhhhhccCc
Confidence 45666543 58999999999999876 5899999998653 22 23333321
Q ss_pred ----------hcCChhHHhHhhh-------------hcCCCCCCHHHHHHHHHHhhcC-----------CCcEEEeeccc
Q 042825 471 ----------TKGTLGRHLFNWE-------------EEGLEPLEWNTRLNIALDVARG-----------DDMRVADFGLV 516 (631)
Q Consensus 471 ----------~~gsL~~~L~~~~-------------~~~~~~L~~~~~~~I~~~ia~g-----------~~~kl~DFGla 516 (631)
..|.|...+.+.. ++....+.+.|+++||+...+- ..+|++|||+|
T Consensus 132 kcLLiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~nIAHRDlKpENLLyt~t~~na~lKLtDfGFA 211 (400)
T KOG0604|consen 132 KCLLIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSMNIAHRDLKPENLLYTTTSPNAPLKLTDFGFA 211 (400)
T ss_pred eeeEeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhcchhhccCChhheeeecCCCCcceEecccccc
Confidence 1266655554311 1112345566666666655443 34689999999
Q ss_pred cccCCCCccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCh---HHHHHHHH-HhHh--
Q 042825 517 RLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDP---EYIIHLAT-WFQK-- 590 (631)
Q Consensus 517 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~---~~~~~l~~-~~~~-- 590 (631)
+.... .....+.+-|+.|.|||++...+|+...|+||+||+||-|++|-+||....... .-...+.. ....
T Consensus 212 K~t~~---~~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~aispgMk~rI~~gqy~FP~ 288 (400)
T KOG0604|consen 212 KETQE---PGDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKRRIRTGQYEFPE 288 (400)
T ss_pred cccCC---CccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCccCChhHHhHhhccCccCCC
Confidence 97532 234566788999999999999999999999999999999999999998653311 11111111 1111
Q ss_pred --hhcCChhHHHHHHhhcCCChhhHHhHHHHHH
Q 042825 591 --MHKNHDTFQMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 591 --~~~~~~~l~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
....++..+++|+.+|+.+|.+|.++.++++
T Consensus 289 pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~ 321 (400)
T KOG0604|consen 289 PEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMD 321 (400)
T ss_pred hhHhHHHHHHHHHHHHHhcCCchhheeHHHhhc
Confidence 1122467899999999999999999998875
|
|
| >KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.68 E-value=2.8e-16 Score=153.25 Aligned_cols=206 Identities=17% Similarity=0.215 Sum_probs=137.3
Q ss_pred CHHHHHhhcCCcccceeecCCCceEEEEEE-ecCCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc---------------
Q 042825 409 PIQVLRNATNNFSEENRLGRGGVGTVYKGE-LKDGTEVGVKRMELGSVTEQGIAQFESEITVLTK--------------- 472 (631)
Q Consensus 409 ~~~~l~~~t~~f~~~~~iG~G~fg~Vyk~~-~~~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~--------------- 472 (631)
+|+++.+.| .++||+|+|+.|--+. +.+|.++|||++.+. ....+.+..+|++++..
T Consensus 74 ~F~d~YkLt-----~e~LGeGAyasVqtcv~i~t~~EYAVKiidKq--~gHsR~RvfREVe~f~~Cqgh~nilqLiefFE 146 (463)
T KOG0607|consen 74 KFEDMYKLT-----SELLGEGAYASVQTCVSIQTGKEYAVKIIDKQ--PGHSRSRVFREVETFYQCQGHKNILQLIEFFE 146 (463)
T ss_pred hHHHHHHhH-----HHHhcCccceeeeeeeeeccchhhhhhhhhcC--CchHHHHHHHHHHHHHHhcCCccHHHHHHHhc
Confidence 467777765 4689999999999987 778999999999875 33467788899998865
Q ss_pred --------------CChhHHhHhhhh-----------cCCCCCCHHHHHHHHHHhhcC-----------CCcEEEeeccc
Q 042825 473 --------------GTLGRHLFNWEE-----------EGLEPLEWNTRLNIALDVARG-----------DDMRVADFGLV 516 (631)
Q Consensus 473 --------------gsL~~~L~~~~~-----------~~~~~L~~~~~~~I~~~ia~g-----------~~~kl~DFGla 516 (631)
|.+-.++++... +....|++.|...||+...+. .-+||+||-++
T Consensus 147 dd~~FYLVfEKm~GGplLshI~~~~~F~E~EAs~vvkdia~aLdFlH~kgIAHRDlKPENiLC~~pn~vsPvKiCDfDLg 226 (463)
T KOG0607|consen 147 DDTRFYLVFEKMRGGPLLSHIQKRKHFNEREASRVVKDIASALDFLHTKGIAHRDLKPENILCESPNKVSPVKICDFDLG 226 (463)
T ss_pred ccceEEEEEecccCchHHHHHHHhhhccHHHHHHHHHHHHHHHHHHhhcCcccccCCccceeecCCCCcCceeeeccccc
Confidence 555555543110 111234444444444433333 23689999887
Q ss_pred cccCCCC-----ccccccccccCcccccccccc-----cCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCh--------
Q 042825 517 RLVPENG-----KHSILTKVAGTFGYLAPEYIV-----TGRITAKVDVYSFGMILMDLITGRKVVDATHSDP-------- 578 (631)
Q Consensus 517 ~~~~~~~-----~~~~~~~~~gt~~Y~aPE~~~-----~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~-------- 578 (631)
.-+.... .+....+.+|+..|||||+.. ...|+.+.|.||+|||||-|++|..||.+....+
T Consensus 227 Sg~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdrGe~ 306 (463)
T KOG0607|consen 227 SGIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWDRGEV 306 (463)
T ss_pred cccccCCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCccCCCc
Confidence 5442111 112234578999999999864 2348999999999999999999999997643221
Q ss_pred --HHHHHHHHHh---------HhhhcCChhHHHHHHhhcCCChhhHHhHHHHHH
Q 042825 579 --EYIIHLATWF---------QKMHKNHDTFQMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 579 --~~~~~l~~~~---------~~~~~~~~~l~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
.-...+-+-. +.....+.+.+++|...+..|+.+|.++.++++
T Consensus 307 Cr~CQ~~LFesIQEGkYeFPdkdWahIS~eakdlisnLlvrda~~rlsa~~vln 360 (463)
T KOG0607|consen 307 CRVCQNKLFESIQEGKYEFPDKDWAHISSEAKDLISNLLVRDAKQRLSAAQVLN 360 (463)
T ss_pred cHHHHHHHHHHHhccCCcCChhhhHHhhHHHHHHHHHHHhccHHhhhhhhhccC
Confidence 0011111100 011123567899999999999999998887765
|
|
| >cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase | Back alignment and domain information |
|---|
Probab=99.68 E-value=4.9e-16 Score=177.35 Aligned_cols=91 Identities=23% Similarity=0.340 Sum_probs=68.6
Q ss_pred ccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHH---HhHhhhcCChhHHHHHHhhcCC
Q 042825 532 AGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLAT---WFQKMHKNHDTFQMAIDKTIQL 608 (631)
Q Consensus 532 ~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~---~~~~~~~~~~~l~~~id~~L~~ 608 (631)
+||+.|||||++.+..++.++|||||||+||||+||+.||.+..........+.. |..........+.+++..+|..
T Consensus 541 vGT~~Y~APE~l~~~~~~~~~DiwSlG~il~ElltG~~pf~~~~~~~~~~~il~~~~~~p~~~~~~~~~~~~~l~~lL~~ 620 (669)
T cd05610 541 LGTPDYLAPELLLGKPHGPAVDWWALGVCLFEFLTGIPPFNDETPQQVFQNILNRDIPWPEGEEKLSVNAQNAIEILLTM 620 (669)
T ss_pred eeCccccCHHHcCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCCCCCcccccCCHHHHHHHHHHccc
Confidence 5699999999999989999999999999999999999999865332111111111 1111112235688999999999
Q ss_pred ChhhHHhHHHHHHH
Q 042825 609 DEENLANVSTVAEL 622 (631)
Q Consensus 609 d~~~r~~~~~vl~l 622 (631)
||.+|+++.++++.
T Consensus 621 dP~~R~ta~e~l~h 634 (669)
T cd05610 621 DPTKRAGLKELKQH 634 (669)
T ss_pred ChhHCcCHHHHHhC
Confidence 99999999998865
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481 |
| >KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.68 E-value=7.5e-18 Score=159.18 Aligned_cols=205 Identities=20% Similarity=0.302 Sum_probs=134.4
Q ss_pred CCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc------------------------
Q 042825 418 NNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK------------------------ 472 (631)
Q Consensus 418 ~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~------------------------ 472 (631)
..|+...+||+|.||+||+++.+ +|+.||+|++-.+.....--....+|++++..
T Consensus 17 ~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~r 96 (376)
T KOG0669|consen 17 SKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRDR 96 (376)
T ss_pred hHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCccccc
Confidence 34666789999999999999976 47889998764321111111233556555543
Q ss_pred -----------CChhHHh------------HhhhhcCCCCCCHHHHHHHHHHhhcC--------CCcEEEeeccccccCC
Q 042825 473 -----------GTLGRHL------------FNWEEEGLEPLEWNTRLNIALDVARG--------DDMRVADFGLVRLVPE 521 (631)
Q Consensus 473 -----------gsL~~~L------------~~~~~~~~~~L~~~~~~~I~~~ia~g--------~~~kl~DFGla~~~~~ 521 (631)
-+|...| ..++..-..+|.+.||.+|++...++ +.+||+|||+||.+..
T Consensus 97 ~t~ylVf~~cehDLaGlLsn~~vr~sls~Ikk~Mk~Lm~GL~~iHr~kilHRDmKaaNvLIt~dgilklADFGlar~fs~ 176 (376)
T KOG0669|consen 97 ATFYLVFDFCEHDLAGLLSNRKVRFSLSEIKKVMKGLMNGLYYIHRNKILHRDMKAANVLITKDGILKLADFGLARAFST 176 (376)
T ss_pred ceeeeeHHHhhhhHHHHhcCccccccHHHHHHHHHHHHHHHHHHHHhhHHhhcccHhhEEEcCCceEEeeccccccceec
Confidence 1111111 11222223567888888888776554 5678999999987642
Q ss_pred CCc--cccccccccCcccccccccccC-CCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHH----------Hh
Q 042825 522 NGK--HSILTKVAGTFGYLAPEYIVTG-RITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLAT----------WF 588 (631)
Q Consensus 522 ~~~--~~~~~~~~gt~~Y~aPE~~~~~-~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~----------~~ 588 (631)
... ....+..+-|..|.+||.+.+. .|+++.|||.-||+|.||.||.+-+.+..+. ...++.. |.
T Consensus 177 ~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteq--qql~~Is~LcGs~tkevWP 254 (376)
T KOG0669|consen 177 SKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQ--QQLHLISQLCGSITKEVWP 254 (376)
T ss_pred ccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHH--HHHHHHHHHhccCCcccCC
Confidence 211 1234556779999999998875 5999999999999999999999888765332 2222211 21
Q ss_pred --------Hhh----h---------------cCChhHHHHHHhhcCCChhhHHhHHHHHHHHH
Q 042825 589 --------QKM----H---------------KNHDTFQMAIDKTIQLDEENLANVSTVAELGD 624 (631)
Q Consensus 589 --------~~~----~---------------~~~~~l~~~id~~L~~d~~~r~~~~~vl~lal 624 (631)
..+ + -..++..++++++|..||.+|+.+.++++-..
T Consensus 255 ~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~alnh~~ 317 (376)
T KOG0669|consen 255 NVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALNHDF 317 (376)
T ss_pred CcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhchhh
Confidence 000 0 01246779999999999999999988876443
|
|
| >PLN03224 probable serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=4.8e-16 Score=169.28 Aligned_cols=203 Identities=19% Similarity=0.214 Sum_probs=124.2
Q ss_pred hcCCcccceeecCCCceEEEEEEe-----------------cCCcEEEEEEEecCCCCHHHHHHHH--------------
Q 042825 416 ATNNFSEENRLGRGGVGTVYKGEL-----------------KDGTEVGVKRMELGSVTEQGIAQFE-------------- 464 (631)
Q Consensus 416 ~t~~f~~~~~iG~G~fg~Vyk~~~-----------------~~g~~vAvK~l~~~~~~~~~~~~~~-------------- 464 (631)
.+++|+..++||+|+||+||+|.+ ..++.||||++..... ...++|.
T Consensus 143 ~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~--~~~~~fl~e~~~~~~~~e~~~ 220 (507)
T PLN03224 143 SSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQ--GVRQDFLKTGTLAKGSAETGM 220 (507)
T ss_pred cccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccch--hhHHHHHhhhhhhhcccchhH
Confidence 577999999999999999999964 2356899999865321 1112222
Q ss_pred HHHHHH-----------------------------------------hcCChhHHhHhhh-----------hcC------
Q 042825 465 SEITVL-----------------------------------------TKGTLGRHLFNWE-----------EEG------ 486 (631)
Q Consensus 465 ~Ei~~l-----------------------------------------~~gsL~~~L~~~~-----------~~~------ 486 (631)
.|+.++ ..|+|.++++... ..+
T Consensus 221 vE~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~ 300 (507)
T PLN03224 221 VEAYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDN 300 (507)
T ss_pred HHHHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhh
Confidence 222211 1156666665311 000
Q ss_pred --CCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCCccccccccccCcccccc
Q 042825 487 --LEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAP 540 (631)
Q Consensus 487 --~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~Y~aP 540 (631)
...++|.....|+.+++.+ +.+||+|||+++.+.... ........+|+.|+||
T Consensus 301 ~~~~~~~~~~~~~i~~ql~~aL~~lH~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~-~~~~~~g~~tp~Y~aP 379 (507)
T PLN03224 301 MPQDKRDINVIKGVMRQVLTGLRKLHRIGIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGI-NFNPLYGMLDPRYSPP 379 (507)
T ss_pred cccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCchHhEEECCCCcEEEEeCcCccccccCC-ccCccccCCCcceeCh
Confidence 1235677777777776654 457899999997653221 1111223457899999
Q ss_pred cccccCC--------------------C--CchhhHHHHHHHHHHHHcCCC-CCCCCCCChH----HHHHHHHHhHh---
Q 042825 541 EYIVTGR--------------------I--TAKVDVYSFGMILMDLITGRK-VVDATHSDPE----YIIHLATWFQK--- 590 (631)
Q Consensus 541 E~~~~~~--------------------~--~~k~DVwS~GvvL~ElltG~~-P~~~~~~~~~----~~~~l~~~~~~--- 590 (631)
|.+.... | ..+.||||+||++|||++|.. |+........ ....+..|...
T Consensus 380 E~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r~~~~~ 459 (507)
T PLN03224 380 EELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWRMYKGQ 459 (507)
T ss_pred hhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHHhhccc
Confidence 9875332 1 134799999999999999875 6653211000 01122233211
Q ss_pred ------hhcCChhHHHHHHhhcCCCh---hhHHhHHHHHH
Q 042825 591 ------MHKNHDTFQMAIDKTIQLDE---ENLANVSTVAE 621 (631)
Q Consensus 591 ------~~~~~~~l~~~id~~L~~d~---~~r~~~~~vl~ 621 (631)
....++...|++.++|..++ .+|.++.++++
T Consensus 460 ~~~~~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~ 499 (507)
T PLN03224 460 KYDFSLLDRNKEAGWDLACKLITKRDQANRGRLSVGQALS 499 (507)
T ss_pred CCCcccccccChHHHHHHHHHhccCCCCcccCCCHHHHhC
Confidence 11234678999999998655 57999998775
|
|
| >KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.67 E-value=2.9e-17 Score=160.67 Aligned_cols=192 Identities=20% Similarity=0.289 Sum_probs=122.1
Q ss_pred hcCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCH-HHHHHHHHHHHHHhc---------------------
Q 042825 416 ATNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTE-QGIAQFESEITVLTK--------------------- 472 (631)
Q Consensus 416 ~t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~-~~~~~~~~Ei~~l~~--------------------- 472 (631)
..++|+...+||+|+|++|..++++ +.+.+|+|+++++-..+ ....-.+.|-.+...
T Consensus 248 ~l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlf 327 (593)
T KOG0695|consen 248 GLQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLF 327 (593)
T ss_pred ccccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEE
Confidence 3568899999999999999999976 57899999987654432 122233444444433
Q ss_pred --------CChhHHhHhhhhcCCCCCCHHHH------HHHHHHhh--cC----------------CCcEEEeeccccccC
Q 042825 473 --------GTLGRHLFNWEEEGLEPLEWNTR------LNIALDVA--RG----------------DDMRVADFGLVRLVP 520 (631)
Q Consensus 473 --------gsL~~~L~~~~~~~~~~L~~~~~------~~I~~~ia--~g----------------~~~kl~DFGla~~~~ 520 (631)
|+|--|... ...|...|. ..+|+... +| +++|++|||+++.--
T Consensus 328 fvieyv~ggdlmfhmqr-----qrklpeeharfys~ei~lal~flh~rgiiyrdlkldnvlldaeghikltdygmcke~l 402 (593)
T KOG0695|consen 328 FVIEYVNGGDLMFHMQR-----QRKLPEEHARFYSAEICLALNFLHERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGL 402 (593)
T ss_pred EEEEEecCcceeeehhh-----hhcCcHHHhhhhhHHHHHHHHHHhhcCeeeeeccccceEEccCCceeecccchhhcCC
Confidence 333222211 111222111 11122111 12 678999999998542
Q ss_pred CCCccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCC---CChHHHHH-----HHHHhHhhh
Q 042825 521 ENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATH---SDPEYIIH-----LATWFQKMH 592 (631)
Q Consensus 521 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~---~~~~~~~~-----l~~~~~~~~ 592 (631)
.++ ..+.+++||+.|+|||.+++..|...+|.|++||+|+||+.|+.||+... .+.....+ +.+..+..-
T Consensus 403 ~~g--d~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylfqvilekqiripr 480 (593)
T KOG0695|consen 403 GPG--DTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQVILEKQIRIPR 480 (593)
T ss_pred CCC--cccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHHHhhhcccccc
Confidence 122 24567999999999999999999999999999999999999999998321 11111111 222222221
Q ss_pred cCChhHHHHHHhhcCCChhhHH
Q 042825 593 KNHDTFQMAIDKTIQLDEENLA 614 (631)
Q Consensus 593 ~~~~~l~~~id~~L~~d~~~r~ 614 (631)
..+-....++...|..||.+|.
T Consensus 481 slsvkas~vlkgflnkdp~erl 502 (593)
T KOG0695|consen 481 SLSVKASHVLKGFLNKDPKERL 502 (593)
T ss_pred eeehhhHHHHHHhhcCCcHHhc
Confidence 2233556788888888998874
|
|
| >smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain | Back alignment and domain information |
|---|
Probab=99.66 E-value=1.6e-15 Score=150.38 Aligned_cols=179 Identities=26% Similarity=0.348 Sum_probs=130.2
Q ss_pred CceEEEEEEecC-CcEEEEEEEecCCCCHHHHHHHHHHHHHHhc----------------------------CChhHHhH
Q 042825 430 GVGTVYKGELKD-GTEVGVKRMELGSVTEQGIAQFESEITVLTK----------------------------GTLGRHLF 480 (631)
Q Consensus 430 ~fg~Vyk~~~~~-g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~----------------------------gsL~~~L~ 480 (631)
+||.||+|+... |+.+|+|++........ .+.+.+|++.+.+ ++|.+++.
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~-~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~ 79 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKK-RERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLK 79 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccH-HHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHH
Confidence 589999999874 89999999876543221 5788889887765 24444442
Q ss_pred hhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCCccccccccccCcc
Q 042825 481 NWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENGKHSILTKVAGTFG 536 (631)
Q Consensus 481 ~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~ 536 (631)
. ...+++.....++.+++++ +.++++|||.+....... ......++..
T Consensus 80 ~-----~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~---~~~~~~~~~~ 151 (244)
T smart00220 80 K-----RGRLSEDEARFYARQILSALEYLHSNGIIHRDLKPENILLDEDGHVKLADFGLARQLDPGG---LLTTFVGTPE 151 (244)
T ss_pred h-----ccCCCHHHHHHHHHHHHHHHHHHHHcCeecCCcCHHHeEECCCCcEEEccccceeeecccc---ccccccCCcC
Confidence 1 1126777777777777654 467899999998764321 2345668899
Q ss_pred cccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHhHhhhc--------CChhHHHHHHhhcCC
Q 042825 537 YLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQKMHK--------NHDTFQMAIDKTIQL 608 (631)
Q Consensus 537 Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~~~~~~--------~~~~l~~~id~~L~~ 608 (631)
|++||......++.++||||||++++||++|+.||+..... ..+.++...... ...++.+++.+++..
T Consensus 152 ~~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~ 227 (244)
T smart00220 152 YMAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQL----LELFKKIGKPKPPFPPPEWKISPEAKDLIRKLLVK 227 (244)
T ss_pred CCCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcH----HHHHHHHhccCCCCccccccCCHHHHHHHHHHccC
Confidence 99999998888999999999999999999999999753222 112222211110 346789999999999
Q ss_pred ChhhHHhHHHHHH
Q 042825 609 DEENLANVSTVAE 621 (631)
Q Consensus 609 d~~~r~~~~~vl~ 621 (631)
+|.+|+++.++++
T Consensus 228 ~p~~Rp~~~~~~~ 240 (244)
T smart00220 228 DPEKRLTAEEALQ 240 (244)
T ss_pred CchhccCHHHHhh
Confidence 9999999998876
|
Phosphotransferases. Serine or threonine-specific kinase subfamily. |
| >KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.66 E-value=1.1e-16 Score=170.09 Aligned_cols=191 Identities=23% Similarity=0.299 Sum_probs=127.6
Q ss_pred hcCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc----------------------
Q 042825 416 ATNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK---------------------- 472 (631)
Q Consensus 416 ~t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~---------------------- 472 (631)
.++.|.....+|.|+|+.|-++... +++..+||++...... -..|+.++..
T Consensus 320 ~~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~~~------~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~ 393 (612)
T KOG0603|consen 320 FTESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRADD------NQDEIPISLLVRDHPNIVKSHDVYEDGKEIYL 393 (612)
T ss_pred cchhhccccccCCCCccceeeeeccccccchhheeccccccc------cccccchhhhhcCCCcceeecceecCCceeee
Confidence 4677888888999999999999865 5889999999765211 1222222211
Q ss_pred -------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC-------------------CCcEEEeeccccccCCCCccc
Q 042825 473 -------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG-------------------DDMRVADFGLVRLVPENGKHS 526 (631)
Q Consensus 473 -------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g-------------------~~~kl~DFGla~~~~~~~~~~ 526 (631)
|-+.+.+..........-.|..-+-+|+...++ ++++|+|||.++.....
T Consensus 394 v~e~l~g~ell~ri~~~~~~~~e~~~w~~~lv~Av~~LH~~gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~---- 469 (612)
T KOG0603|consen 394 VMELLDGGELLRRIRSKPEFCSEASQWAAELVSAVDYLHEQGVVHRDLKPGNILLDGSAGHLRLTYFGFWSELERS---- 469 (612)
T ss_pred eehhccccHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhcCeeecCCChhheeecCCCCcEEEEEechhhhCchh----
Confidence 222111111000001111244444333333322 56899999999987522
Q ss_pred cccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHhHhh---hcCChhHHHHHH
Q 042825 527 ILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQKM---HKNHDTFQMAID 603 (631)
Q Consensus 527 ~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~~~~---~~~~~~l~~~id 603 (631)
..+.+-|..|.|||+.....|++++|+|||||+||||++|+.||.....+ ..+...+... ...+++.++++.
T Consensus 470 -~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~----~ei~~~i~~~~~s~~vS~~AKdLl~ 544 (612)
T KOG0603|consen 470 -CDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAG----IEIHTRIQMPKFSECVSDEAKDLLQ 544 (612)
T ss_pred -hcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCch----HHHHHhhcCCccccccCHHHHHHHH
Confidence 33456788999999999889999999999999999999999999865443 1222222222 344678999999
Q ss_pred hhcCCChhhHHhHHHHHH
Q 042825 604 KTIQLDEENLANVSTVAE 621 (631)
Q Consensus 604 ~~L~~d~~~r~~~~~vl~ 621 (631)
.+|+.||..|+++.++..
T Consensus 545 ~LL~~dP~~Rl~~~~i~~ 562 (612)
T KOG0603|consen 545 QLLQVDPALRLGADEIGA 562 (612)
T ss_pred HhccCChhhCcChhhhcc
Confidence 999999999999988653
|
|
| >smart00750 KIND kinase non-catalytic C-lobe domain | Back alignment and domain information |
|---|
Probab=99.65 E-value=5.1e-16 Score=147.14 Aligned_cols=140 Identities=15% Similarity=0.099 Sum_probs=100.5
Q ss_pred CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------CCcEEEeeccccccCCCCccccccccccC
Q 042825 473 GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------DDMRVADFGLVRLVPENGKHSILTKVAGT 534 (631)
Q Consensus 473 gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------~~~kl~DFGla~~~~~~~~~~~~~~~~gt 534 (631)
|+|.+++.. ....++|.+...|+.++++| +.+|+ ||+++..... ...||
T Consensus 1 GsL~~~l~~----~~~~l~~~~~~~i~~qi~~~L~~lH~~~kp~Nil~~~~~~~~~--fG~~~~~~~~-------~~~g~ 67 (176)
T smart00750 1 VSLADILEV----RGRPLNEEEIWAVCLQCLRALRELHRQAKSGNILLTWDGLLKL--DGSVAFKTPE-------QSRVD 67 (176)
T ss_pred CcHHHHHHH----hCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccEeEcCccceee--ccceEeeccc-------cCCCc
Confidence 677777753 23468999999999998887 22445 9998876321 12689
Q ss_pred cccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHhHhhh--------cCCh--hHHHHHHh
Q 042825 535 FGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQKMH--------KNHD--TFQMAIDK 604 (631)
Q Consensus 535 ~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~~~~~--------~~~~--~l~~~id~ 604 (631)
+.|||||++.+..++.++|||||||++|||+||+.||............+........ ...+ ++.+++.+
T Consensus 68 ~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 147 (176)
T smart00750 68 PYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMPADDPRDRSNLESVSAARSFADFMRV 147 (176)
T ss_pred ccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhccCCccccccHHHHHhhhhHHHHHHH
Confidence 9999999999999999999999999999999999999754322111111111111110 0011 58999999
Q ss_pred hcCCChhhHHhHHHHHHHHHh
Q 042825 605 TIQLDEENLANVSTVAELGDH 625 (631)
Q Consensus 605 ~L~~d~~~r~~~~~vl~lal~ 625 (631)
|+..+|.+|+++.++++....
T Consensus 148 cl~~~p~~Rp~~~~ll~~~~~ 168 (176)
T smart00750 148 CASRLPQRREAANHYLAHCRA 168 (176)
T ss_pred HHhcccccccCHHHHHHHHHH
Confidence 999999999999998875443
|
It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features |
| >KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription] | Back alignment and domain information |
|---|
Probab=99.61 E-value=8.3e-16 Score=143.57 Aligned_cols=197 Identities=16% Similarity=0.283 Sum_probs=140.3
Q ss_pred cCCcccceeecCCCceEEEEEE-ecCCcEEEEEEEecCCCCHHHHHHHHHHHHHHhcC-------ChhH-----------
Q 042825 417 TNNFSEENRLGRGGVGTVYKGE-LKDGTEVGVKRMELGSVTEQGIAQFESEITVLTKG-------TLGR----------- 477 (631)
Q Consensus 417 t~~f~~~~~iG~G~fg~Vyk~~-~~~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~g-------sL~~----------- 477 (631)
.++|+..+.+|+|.|++||.|. ..+.+.++||.++.- ..+...+|+.++.+- .|.+
T Consensus 37 ~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPV-----kkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~Sktpa 111 (338)
T KOG0668|consen 37 QDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPV-----KKKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPS 111 (338)
T ss_pred cchHHHHHHHcCccHhhHhcccccCCCceEEEeeechH-----HHHHHHHHHHHHHhccCCCCeeehhhhhcCccccCch
Confidence 4678889999999999999998 456788999998753 457789999999870 0111
Q ss_pred ----Hh-----------------HhhhhcCCCCCCHHHHHHHHHHhhcC---------CCcEEEeeccccccCCCCcccc
Q 042825 478 ----HL-----------------FNWEEEGLEPLEWNTRLNIALDVARG---------DDMRVADFGLVRLVPENGKHSI 527 (631)
Q Consensus 478 ----~L-----------------~~~~~~~~~~L~~~~~~~I~~~ia~g---------~~~kl~DFGla~~~~~~~~~~~ 527 (631)
++ ..|..+....|+++|.+.|++...+. ..+++.|+|+|.+..+...
T Consensus 112 LiFE~v~n~Dfk~ly~tl~d~dIryY~~elLkALdyCHS~GImHRDVKPhNvmIdh~~rkLrlIDWGLAEFYHp~~e--- 188 (338)
T KOG0668|consen 112 LIFEYVNNTDFKQLYPTLTDYDIRYYIYELLKALDYCHSMGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKE--- 188 (338)
T ss_pred hHhhhhccccHHHHhhhhchhhHHHHHHHHHHHHhHHHhcCcccccCCcceeeechhhceeeeeecchHhhcCCCce---
Confidence 11 01222334567888877777665554 3467999999998764432
Q ss_pred ccccccCcccccccccccC-CCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHH--------------------
Q 042825 528 LTKVAGTFGYLAPEYIVTG-RITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLAT-------------------- 586 (631)
Q Consensus 528 ~~~~~gt~~Y~aPE~~~~~-~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~-------------------- 586 (631)
..-.+.+..|-.||.+..- .|+..-|+|||||++.+|+..+.||-....+......+.+
T Consensus 189 YnVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt~el~~Yl~KY~i~Ldp 268 (338)
T KOG0668|consen 189 YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGTDELYAYLNKYQIDLDP 268 (338)
T ss_pred eeeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhChHHHHHHHHHHccCCCh
Confidence 2334567788899998764 5899999999999999999999998755444322222211
Q ss_pred -------------HhHhhhcC-----ChhHHHHHHhhcCCChhhHHhHHHHHH
Q 042825 587 -------------WFQKMHKN-----HDTFQMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 587 -------------~~~~~~~~-----~~~l~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
|-+....+ +++..|++|+.|+.|+.+|+++.+++.
T Consensus 269 ~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~ 321 (338)
T KOG0668|consen 269 QFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMA 321 (338)
T ss_pred hHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhc
Confidence 21111111 367899999999999999999998764
|
|
| >KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.60 E-value=3.2e-16 Score=149.65 Aligned_cols=155 Identities=23% Similarity=0.314 Sum_probs=103.5
Q ss_pred ccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc---------------------------
Q 042825 421 SEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK--------------------------- 472 (631)
Q Consensus 421 ~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~--------------------------- 472 (631)
+..+.||-|+||.||.++.+ +|+.||.|++..-...-...+++.+|+.++.-
T Consensus 56 ~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV~ 135 (449)
T KOG0664|consen 56 QPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYVL 135 (449)
T ss_pred CCCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHHH
Confidence 45688999999999999865 69999999986533233344566677666543
Q ss_pred -----CChhHHhH-----------hhhhcCCCCCCHHHHHHHHHHhhcC--------CCcEEEeeccccccCCCCccccc
Q 042825 473 -----GTLGRHLF-----------NWEEEGLEPLEWNTRLNIALDVARG--------DDMRVADFGLVRLVPENGKHSIL 528 (631)
Q Consensus 473 -----gsL~~~L~-----------~~~~~~~~~L~~~~~~~I~~~ia~g--------~~~kl~DFGla~~~~~~~~~~~~ 528 (631)
.+|++.+. -+..+...+|.+.|..+|.+...+. ..+||+|||+||....+ ....+
T Consensus 136 TELmQSDLHKIIVSPQ~Ls~DHvKVFlYQILRGLKYLHsA~ILHRDIKPGNLLVNSNCvLKICDFGLARvee~d-~~~hM 214 (449)
T KOG0664|consen 136 TELMQSDLHKIIVSPQALTPDHVKVFVYQILRGLKYLHTANILHRDIKPGNLLVNSNCILKICDFGLARTWDQR-DRLNM 214 (449)
T ss_pred HHHHHhhhhheeccCCCCCcchhhhhHHHHHhhhHHHhhcchhhccCCCccEEeccCceEEecccccccccchh-hhhhh
Confidence 11111110 0111122334444444444433332 23589999999986433 23345
Q ss_pred cccccCcccccccccccCC-CCchhhHHHHHHHHHHHHcCCCCCCCCCC
Q 042825 529 TKVAGTFGYLAPEYIVTGR-ITAKVDVYSFGMILMDLITGRKVVDATHS 576 (631)
Q Consensus 529 ~~~~gt~~Y~aPE~~~~~~-~~~k~DVwS~GvvL~ElltG~~P~~~~~~ 576 (631)
+..+-|..|.|||.+++.+ |+.++||||.||++.|++-++--|.....
T Consensus 215 TqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~P 263 (449)
T KOG0664|consen 215 THEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGP 263 (449)
T ss_pred HHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccCh
Confidence 6667799999999999865 99999999999999999988888875443
|
|
| >KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.60 E-value=8.9e-16 Score=158.28 Aligned_cols=162 Identities=22% Similarity=0.277 Sum_probs=116.3
Q ss_pred CcCHHHHHhhcCCcccceeecCCCceEEEEEEecC-CcEEEEEEEecCCCCHHHHHHHHHHHHHHhc-------------
Q 042825 407 AIPIQVLRNATNNFSEENRLGRGGVGTVYKGELKD-GTEVGVKRMELGSVTEQGIAQFESEITVLTK------------- 472 (631)
Q Consensus 407 ~~~~~~l~~~t~~f~~~~~iG~G~fg~Vyk~~~~~-g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~------------- 472 (631)
.+-+.|+. -..|.+....|+|-|++|.+|.... |+.||||+++... ...+.=++|+++|.+
T Consensus 423 rv~igE~L--D~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE---~M~KtGl~EleiLkKL~~AD~Edk~Hcl 497 (752)
T KOG0670|consen 423 RVRIGELL--DSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNE---VMHKTGLKELEILKKLNDADPEDKFHCL 497 (752)
T ss_pred EEehhhhh--cceeEEEeccccceeeeeeeccccCCCCeeEEEEeecch---HHhhhhhHHHHHHHHhhccCchhhhHHH
Confidence 34444443 3478888889999999999999654 8899999998653 234555778888876
Q ss_pred --------------------CChhHHhHhhhhcCCCC----CCHHHHHHHHHHhhcC-------------------CCcE
Q 042825 473 --------------------GTLGRHLFNWEEEGLEP----LEWNTRLNIALDVARG-------------------DDMR 509 (631)
Q Consensus 473 --------------------gsL~~~L~~~~~~~~~~----L~~~~~~~I~~~ia~g-------------------~~~k 509 (631)
-+|.+.|..|.....-. -.|.+.+-||+...+- ..+|
T Consensus 498 rl~r~F~hknHLClVFE~LslNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c~vlHaDIKPDNiLVNE~k~iLK 577 (752)
T KOG0670|consen 498 RLFRHFKHKNHLCLVFEPLSLNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKCGVLHADIKPDNILVNESKNILK 577 (752)
T ss_pred HHHHHhhhcceeEEEehhhhchHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhcCeeecccCccceEeccCcceee
Confidence 34455554443322211 2345555666655443 3368
Q ss_pred EEeeccccccCCCCccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCC
Q 042825 510 VADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSD 577 (631)
Q Consensus 510 l~DFGla~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~ 577 (631)
|||||-|....++ ..+.+.-+..|.|||++.+..|+...|+||.||.||||.||+-.|.+...+
T Consensus 578 LCDfGSA~~~~en----eitPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN 641 (752)
T KOG0670|consen 578 LCDFGSASFASEN----EITPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRTNN 641 (752)
T ss_pred eccCccccccccc----cccHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCCCcH
Confidence 9999999876432 234455677899999999999999999999999999999999999876544
|
|
| >KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.60 E-value=1.9e-16 Score=171.95 Aligned_cols=194 Identities=24% Similarity=0.296 Sum_probs=129.5
Q ss_pred CcccceeecCCCce-EEEEEEecCCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc-------------------------
Q 042825 419 NFSEENRLGRGGVG-TVYKGELKDGTEVGVKRMELGSVTEQGIAQFESEITVLTK------------------------- 472 (631)
Q Consensus 419 ~f~~~~~iG~G~fg-~Vyk~~~~~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~------------------------- 472 (631)
-|...+++|.|+-| .||+|.. +|+.||||++-.+ ......+||..+..
T Consensus 510 ~~~~~eilG~Gs~Gt~Vf~G~y-e~R~VAVKrll~e-----~~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalE 583 (903)
T KOG1027|consen 510 FFSPKEILGYGSNGTVVFRGVY-EGREVAVKRLLEE-----FFDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALE 583 (903)
T ss_pred eeccHHHcccCCCCcEEEEEee-CCceehHHHHhhH-----hHHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEeh
Confidence 45667789999987 5799998 4889999998643 33456788888865
Q ss_pred ---CChhHHhHhh--hhcC-------------CCCCCHHHHHHHHHHhhcC-------------CCcEEEeeccccccCC
Q 042825 473 ---GTLGRHLFNW--EEEG-------------LEPLEWNTRLNIALDVARG-------------DDMRVADFGLVRLVPE 521 (631)
Q Consensus 473 ---gsL~~~L~~~--~~~~-------------~~~L~~~~~~~I~~~ia~g-------------~~~kl~DFGla~~~~~ 521 (631)
.+|.+++... .... ..++...|.++|+++..+- ..++|+|||+++.+..
T Consensus 584 LC~~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~~ 663 (903)
T KOG1027|consen 584 LCACSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSLKIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLAG 663 (903)
T ss_pred HhhhhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhcccccccCCCceEEEEccCCCcceeEEecccccccccCC
Confidence 5666666431 0000 0112222222222222211 2346999999999864
Q ss_pred CCcc-ccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcC-CCCCCCCCCChHHHHHHHHHhHhhh--cCCh-
Q 042825 522 NGKH-SILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITG-RKVVDATHSDPEYIIHLATWFQKMH--KNHD- 596 (631)
Q Consensus 522 ~~~~-~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG-~~P~~~~~~~~~~~~~l~~~~~~~~--~~~~- 596 (631)
+... ....+..||-||+|||++....-+.++||+|+|||+|..+|| ..||.+.... ..++..-..... ...+
T Consensus 664 ~~sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R---~~NIl~~~~~L~~L~~~~d 740 (903)
T KOG1027|consen 664 GKSSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLER---QANILTGNYTLVHLEPLPD 740 (903)
T ss_pred CcchhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHHh---hhhhhcCccceeeeccCch
Confidence 3322 224567899999999999988888899999999999999995 9999754322 222322111111 1112
Q ss_pred -hHHHHHHhhcCCChhhHHhHHHHHH
Q 042825 597 -TFQMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 597 -~l~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
+..++|.+|+..+|..||++.+|+.
T Consensus 741 ~eA~dLI~~ml~~dP~~RPsa~~VL~ 766 (903)
T KOG1027|consen 741 CEAKDLISRMLNPDPQLRPSATDVLN 766 (903)
T ss_pred HHHHHHHHHhcCCCcccCCCHHHHhC
Confidence 7899999999999999999998874
|
|
| >cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins | Back alignment and domain information |
|---|
Probab=99.58 E-value=8.8e-15 Score=145.82 Aligned_cols=174 Identities=16% Similarity=0.112 Sum_probs=114.6
Q ss_pred CCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHH---------------------HHHhcCChhHHhHhhhhcC
Q 042825 429 GGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEI---------------------TVLTKGTLGRHLFNWEEEG 486 (631)
Q Consensus 429 G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei---------------------~~l~~gsL~~~L~~~~~~~ 486 (631)
|.||.||+++.. +++.||+|++................. +.+..|+|.+++..
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~----- 78 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSSEYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHISK----- 78 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchhhhhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHHHHH-----
Confidence 889999999965 589999999976431111111110000 00111566666542
Q ss_pred CCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCCccccccccccCcccccccc
Q 042825 487 LEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEY 542 (631)
Q Consensus 487 ~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~Y~aPE~ 542 (631)
...+++.....++.+++.| +.++++|||.++..... .....++..|+|||.
T Consensus 79 ~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~-----~~~~~~~~~y~aPE~ 153 (237)
T cd05576 79 FLNIPEECVKRWAAEMVVALDALHREGIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDS-----CDGEAVENMYCAPEV 153 (237)
T ss_pred hcCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCCCEEEecccchhccccc-----cccCCcCccccCCcc
Confidence 1247777777777776655 45789999988765311 223456778999999
Q ss_pred cccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHhHhhhcCChhHHHHHHhhcCCChhhHHhH
Q 042825 543 IVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQKMHKNHDTFQMAIDKTIQLDEENLANV 616 (631)
Q Consensus 543 ~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~id~~L~~d~~~r~~~ 616 (631)
.....++.++||||+||++|||++|+.|++...... .....+ ......+.++.+++.+++..||.+|+++
T Consensus 154 ~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~~---~~~~~~-~~~~~~~~~~~~li~~~l~~dp~~R~~~ 223 (237)
T cd05576 154 GGISEETEACDWWSLGAILFELLTGKTLVECHPSGI---NTHTTL-NIPEWVSEEARSLLQQLLQFNPTERLGA 223 (237)
T ss_pred cCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchhc---cccccc-CCcccCCHHHHHHHHHHccCCHHHhcCC
Confidence 988889999999999999999999998876432110 000000 0011124678999999999999999875
|
Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha |
| >KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.56 E-value=2.5e-14 Score=147.04 Aligned_cols=114 Identities=18% Similarity=0.256 Sum_probs=82.8
Q ss_pred cEEEeeccccccCCCCccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCC-----CChHHHH
Q 042825 508 MRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATH-----SDPEYII 582 (631)
Q Consensus 508 ~kl~DFGla~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~-----~~~~~~~ 582 (631)
+||+|||-|.... ...+.-+.|..|.|||++.+..|++.+|||||+|+.+||+||..-|+.-. .++....
T Consensus 393 vKIaDlGNACW~~-----khFT~DIQTRQYRapEVllGsgY~~~ADiWS~AC~~FELaTGDyLFePhsG~~Y~rDEDHiA 467 (590)
T KOG1290|consen 393 VKIADLGNACWVH-----KHFTEDIQTRQYRAPEVLLGSGYSTSADIWSTACMAFELATGDYLFEPHSGENYSRDEDHIA 467 (590)
T ss_pred EEEeeccchhhhh-----hhhchhhhhhhccCcceeecCCCCCchhHHHHHHHHHHhhcCceeecCCCCCCCCccHHHHH
Confidence 5789999887753 22455667899999999999999999999999999999999998886422 2222222
Q ss_pred HHHHHh-------------------------------------------HhhhcCChhHHHHHHhhcCCChhhHHhHHHH
Q 042825 583 HLATWF-------------------------------------------QKMHKNHDTFQMAIDKTIQLDEENLANVSTV 619 (631)
Q Consensus 583 ~l~~~~-------------------------------------------~~~~~~~~~l~~~id~~L~~d~~~r~~~~~v 619 (631)
.|.+.. .....+..++.+++-+||+.+|+.|+++.++
T Consensus 468 ~i~ELLG~iPr~ia~~Gk~SRdFFnr~G~LrhI~~LK~WpL~~VL~eKY~~s~e~A~~fsdFL~PmLef~PeKR~tA~~c 547 (590)
T KOG1290|consen 468 LIMELLGKIPRKIALGGKYSRDFFNRRGELRHIRRLKPWPLYEVLIEKYEWSEEDAQQFSDFLSPMLEFDPEKRPTAAQC 547 (590)
T ss_pred HHHHHHhhccHHHHhcCcchHhhhccccceecccccCCCcHHHHHHHHhCCCHHHHHHHHHHHHHHHhcCccccccHHHH
Confidence 222211 0011123467899999999999999999988
Q ss_pred HHHHHhh
Q 042825 620 AELGDHC 626 (631)
Q Consensus 620 l~lal~C 626 (631)
++--+.|
T Consensus 548 l~hPwLn 554 (590)
T KOG1290|consen 548 LKHPWLN 554 (590)
T ss_pred hcCcccc
Confidence 7655554
|
|
| >KOG0472 consensus Leucine-rich repeat protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.56 E-value=1.3e-15 Score=152.76 Aligned_cols=236 Identities=22% Similarity=0.335 Sum_probs=162.8
Q ss_pred cCCCCCCc-eecccceeehhhhc-cccc--hhhhhhhhhhhccccccccccCCCCCCCChhhHHHHHHHHHhCCCCCCCC
Q 042825 4 IPWHPSNF-QLFGFPRLTFRDCM-TATS--ELEREKTERVQGDRRKKRRKIPSASSNQSRPDAAVMQDLKASFVIPKRLK 79 (631)
Q Consensus 4 ~~~~~~~~-~~~~~~~~~~~~~~-~~~~--~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~k~~~~~~~~~~ 79 (631)
|+.+|+.+ ++..+..+....+- ++-+ ...-+.|+.|+...|-+. ++|...+.....+..+|.+.|..+....
T Consensus 149 i~slp~~~~~~~~l~~l~~~~n~l~~l~~~~i~m~~L~~ld~~~N~L~-tlP~~lg~l~~L~~LyL~~Nki~~lPef--- 224 (565)
T KOG0472|consen 149 ISSLPEDMVNLSKLSKLDLEGNKLKALPENHIAMKRLKHLDCNSNLLE-TLPPELGGLESLELLYLRRNKIRFLPEF--- 224 (565)
T ss_pred cccCchHHHHHHHHHHhhccccchhhCCHHHHHHHHHHhcccchhhhh-cCChhhcchhhhHHHHhhhcccccCCCC---
Confidence 45667776 66666666665553 2222 223467777777777666 6676666666667777766665553210
Q ss_pred CCCCCCCC--------------ccceeeCCCCCeEEEEeCCCCCcccCcchhcCCccCceeecccCcccCCCCcCccc--
Q 042825 80 WSDPDPCQ--------------WSHVICSDDGQVTNIELQDQNRKGTVPPILKKLSSMAVMYLENNQLRGPIPSLVGS-- 143 (631)
Q Consensus 80 w~~~~~C~--------------w~gv~C~~~~~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~L~~N~l~g~lP~~~~~-- 143 (631)
.-|+ .+.-.|...+++..|||.+|.++ .+|.+++-|++|.+||||+|.++ .+|..+|+
T Consensus 225 ----~gcs~L~Elh~g~N~i~~lpae~~~~L~~l~vLDLRdNklk-e~Pde~clLrsL~rLDlSNN~is-~Lp~sLgnlh 298 (565)
T KOG0472|consen 225 ----PGCSLLKELHVGENQIEMLPAEHLKHLNSLLVLDLRDNKLK-EVPDEICLLRSLERLDLSNNDIS-SLPYSLGNLH 298 (565)
T ss_pred ----CccHHHHHHHhcccHHHhhHHHHhcccccceeeeccccccc-cCchHHHHhhhhhhhcccCCccc-cCCcccccce
Confidence 0121 11124555678899999999999 89999999999999999999999 46655441
Q ss_pred c-------------------------------------------------------------------------------
Q 042825 144 L------------------------------------------------------------------------------- 144 (631)
Q Consensus 144 L------------------------------------------------------------------------------- 144 (631)
|
T Consensus 299 L~~L~leGNPlrTiRr~ii~~gT~~vLKyLrs~~~~dglS~se~~~e~~~t~~~~~~~~~~~~i~tkiL~~s~~qlt~VP 378 (565)
T KOG0472|consen 299 LKFLALEGNPLRTIRREIISKGTQEVLKYLRSKIKDDGLSQSEGGTETAMTLPSESFPDIYAIITTKILDVSDKQLTLVP 378 (565)
T ss_pred eeehhhcCCchHHHHHHHHcccHHHHHHHHHHhhccCCCCCCcccccccCCCCCCcccchhhhhhhhhhcccccccccCC
Confidence 1
Q ss_pred ------------cccccccccce-----------------------ecCCCCCCcCCCCCCcEEEccCCcccccCCCCCC
Q 042825 145 ------------EFFSAYEANIS-----------------------GTIPDFIGTDTFPQLSYLDLGNNNLQGTIPSSFG 189 (631)
Q Consensus 145 ------------~~L~l~~n~l~-----------------------g~ip~~~~~~~l~~L~~L~Ls~N~l~g~iP~~~~ 189 (631)
+..+++.|++. +.+|..+. .+++|..|+|++|.+. .+|..+
T Consensus 379 dEVfea~~~~~Vt~VnfskNqL~elPk~L~~lkelvT~l~lsnn~isfv~~~l~--~l~kLt~L~L~NN~Ln-~LP~e~- 454 (565)
T KOG0472|consen 379 DEVFEAAKSEIVTSVNFSKNQLCELPKRLVELKELVTDLVLSNNKISFVPLELS--QLQKLTFLDLSNNLLN-DLPEEM- 454 (565)
T ss_pred HHHHHHhhhcceEEEecccchHhhhhhhhHHHHHHHHHHHhhcCccccchHHHH--hhhcceeeecccchhh-hcchhh-
Confidence 12222222222 12222222 5788999999999998 899765
Q ss_pred CCccCcCCCCCCCEEEeecCcCcccCC-----------------------hhhccCCCCCCEEEccCCCCcccCCCCCCC
Q 042825 190 MPFADISNLSTLEDLSLGHNKLTGIFP-----------------------VSSFNNHPKLTTLNLTNNLLQGPTPRFNNS 246 (631)
Q Consensus 190 ~~~~~~~~l~~L~~L~L~~N~l~g~iP-----------------------~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~ 246 (631)
+.+..|+.||+++|+|. .+| ++-+.+|.+|++|||.+|.+...+|....+
T Consensus 455 ------~~lv~Lq~LnlS~NrFr-~lP~~~y~lq~lEtllas~nqi~~vd~~~l~nm~nL~tLDL~nNdlq~IPp~Lgnm 527 (565)
T KOG0472|consen 455 ------GSLVRLQTLNLSFNRFR-MLPECLYELQTLETLLASNNQIGSVDPSGLKNMRNLTTLDLQNNDLQQIPPILGNM 527 (565)
T ss_pred ------hhhhhhheecccccccc-cchHHHhhHHHHHHHHhccccccccChHHhhhhhhcceeccCCCchhhCChhhccc
Confidence 48888999999999886 444 333678899999999999999998888888
Q ss_pred CceEEeecCCCccc
Q 042825 247 KLTVDMRTGSNCFC 260 (631)
Q Consensus 247 ~~~~~l~~~~n~~~ 260 (631)
.....+++.+|+|.
T Consensus 528 tnL~hLeL~gNpfr 541 (565)
T KOG0472|consen 528 TNLRHLELDGNPFR 541 (565)
T ss_pred cceeEEEecCCccC
Confidence 77778888999988
|
|
| >KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.53 E-value=3.1e-15 Score=157.39 Aligned_cols=202 Identities=20% Similarity=0.299 Sum_probs=126.6
Q ss_pred HHHHHhhc---CCcccceeecCCCceEEEEEE-ecCCcEEEEEEEecCCC-CHHHHHHHHHHHHHHhc------------
Q 042825 410 IQVLRNAT---NNFSEENRLGRGGVGTVYKGE-LKDGTEVGVKRMELGSV-TEQGIAQFESEITVLTK------------ 472 (631)
Q Consensus 410 ~~~l~~~t---~~f~~~~~iG~G~fg~Vyk~~-~~~g~~vAvK~l~~~~~-~~~~~~~~~~Ei~~l~~------------ 472 (631)
|-.|+++. .-|..++.||-|+||+|..++ .++...+|.|.+++.+. ...+......|-+||..
T Consensus 618 YiRLkRaKMdKSmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyyS 697 (1034)
T KOG0608|consen 618 YIRLKRAKMDKSMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYS 697 (1034)
T ss_pred HHHHHHhhccccceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEE
Confidence 33444443 458889999999999999997 44577899999987653 22344556677777765
Q ss_pred ----------------CChhHHhHhh-----------hhcCCCCCCHHHHHHHHHH--------hhcCCCcEEEeecccc
Q 042825 473 ----------------GTLGRHLFNW-----------EEEGLEPLEWNTRLNIALD--------VARGDDMRVADFGLVR 517 (631)
Q Consensus 473 ----------------gsL~~~L~~~-----------~~~~~~~L~~~~~~~I~~~--------ia~g~~~kl~DFGla~ 517 (631)
|++-..|... ..+..-.++..|.+.+++. |-+.+++||+||||+.
T Consensus 698 FQDkdnLYFVMdYIPGGDmMSLLIrmgIFeE~LARFYIAEltcAiesVHkmGFIHRDiKPDNILIDrdGHIKLTDFGLCT 777 (1034)
T KOG0608|consen 698 FQDKDNLYFVMDYIPGGDMMSLLIRMGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCT 777 (1034)
T ss_pred eccCCceEEEEeccCCccHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHhccceecccCccceEEccCCceeeeeccccc
Confidence 4444444220 0000001111222211111 1123789999999985
Q ss_pred ccC--------CCCc--------------------------------cccccccccCcccccccccccCCCCchhhHHHH
Q 042825 518 LVP--------ENGK--------------------------------HSILTKVAGTFGYLAPEYIVTGRITAKVDVYSF 557 (631)
Q Consensus 518 ~~~--------~~~~--------------------------------~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~ 557 (631)
-+. ..+. .......+||..|+|||++....|+..+|.||.
T Consensus 778 GfRWTHdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~ 857 (1034)
T KOG0608|consen 778 GFRWTHDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSV 857 (1034)
T ss_pred cceeccccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHh
Confidence 321 0000 001123589999999999999999999999999
Q ss_pred HHHHHHHHcCCCCCCCCCCChHHHHHHHHHhHhhh-----cCChhHHHHHHhhcCCChhhH
Q 042825 558 GMILMDLITGRKVVDATHSDPEYIIHLATWFQKMH-----KNHDTFQMAIDKTIQLDEENL 613 (631)
Q Consensus 558 GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~~~~~-----~~~~~l~~~id~~L~~d~~~r 613 (631)
||+||||+.|+.||-.....+ ....+..|-..+. ..+.++.++|.+... +.+.|
T Consensus 858 gvil~em~~g~~pf~~~tp~~-tq~kv~nw~~~l~~~~~~~ls~e~~~li~kLc~-sad~R 916 (1034)
T KOG0608|consen 858 GVILYEMLVGQPPFLADTPGE-TQYKVINWRNFLHIPYQGNLSKEALDLIQKLCC-SADSR 916 (1034)
T ss_pred hHHHHHHhhCCCCccCCCCCc-ceeeeeehhhccccccccccCHHHHHHHHHHhc-Chhhh
Confidence 999999999999997655443 2334556654332 224677888887663 34443
|
|
| >KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=99.53 E-value=7.5e-16 Score=161.66 Aligned_cols=238 Identities=20% Similarity=0.275 Sum_probs=157.8
Q ss_pred CCCCc-eecccceeehhhh-ccccc--hhhhhhhhhhhccccccccccCCCCCCCChhhHHHHH--HHHHhCCCCCCCCC
Q 042825 7 HPSNF-QLFGFPRLTFRDC-MTATS--ELEREKTERVQGDRRKKRRKIPSASSNQSRPDAAVMQ--DLKASFVIPKRLKW 80 (631)
Q Consensus 7 ~~~~~-~~~~~~~~~~~~~-~~~~~--~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~--~~k~~~~~~~~~~w 80 (631)
.|+|. |...++-|-+-.- +...| ..-+++||.|++..|++. ++....+.........+. .+|.+...+...
T Consensus 24 FP~~v~qMt~~~WLkLnrt~L~~vPeEL~~lqkLEHLs~~HN~L~-~vhGELs~Lp~LRsv~~R~N~LKnsGiP~diF-- 100 (1255)
T KOG0444|consen 24 FPHDVEQMTQMTWLKLNRTKLEQVPEELSRLQKLEHLSMAHNQLI-SVHGELSDLPRLRSVIVRDNNLKNSGIPTDIF-- 100 (1255)
T ss_pred CchhHHHhhheeEEEechhhhhhChHHHHHHhhhhhhhhhhhhhH-hhhhhhccchhhHHHhhhccccccCCCCchhc--
Confidence 46665 4444444443222 22222 224699999999999998 555554433322211111 122221111000
Q ss_pred CCCCCCCccceeeCCCCCeEEEEeCCCCCcccCcchhcCCccCceeecccCcccCCCCcCcc----ccccccccccccee
Q 042825 81 SDPDPCQWSHVICSDDGQVTNIELQDQNRKGTVPPILKKLSSMAVMYLENNQLRGPIPSLVG----SLEFFSAYEANISG 156 (631)
Q Consensus 81 ~~~~~C~w~gv~C~~~~~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~L~~N~l~g~lP~~~~----~L~~L~l~~n~l~g 156 (631)
....++.|||++|.|+ ..|..+-+-.++-+|+||+|+|. .||..+. .|-+||||+|++.
T Consensus 101 --------------~l~dLt~lDLShNqL~-EvP~~LE~AKn~iVLNLS~N~Ie-tIPn~lfinLtDLLfLDLS~NrLe- 163 (1255)
T KOG0444|consen 101 --------------RLKDLTILDLSHNQLR-EVPTNLEYAKNSIVLNLSYNNIE-TIPNSLFINLTDLLFLDLSNNRLE- 163 (1255)
T ss_pred --------------ccccceeeecchhhhh-hcchhhhhhcCcEEEEcccCccc-cCCchHHHhhHhHhhhccccchhh-
Confidence 2236889999999998 79999999999999999999998 7887654 6778999999998
Q ss_pred cCCCCCCcCCCCCCcEEEccCCccc----ccCCCCCC--------------CCccCcCCCCCCCEEEeecCcCcccCChh
Q 042825 157 TIPDFIGTDTFPQLSYLDLGNNNLQ----GTIPSSFG--------------MPFADISNLSTLEDLSLGHNKLTGIFPVS 218 (631)
Q Consensus 157 ~ip~~~~~~~l~~L~~L~Ls~N~l~----g~iP~~~~--------------~~~~~~~~l~~L~~L~L~~N~l~g~iP~~ 218 (631)
.+|+.+. .|..|++|+||+|.|. -.+|..-. ..|+.+..+.+|..+|||+|.|. .+|+-
T Consensus 164 ~LPPQ~R--RL~~LqtL~Ls~NPL~hfQLrQLPsmtsL~vLhms~TqRTl~N~Ptsld~l~NL~dvDlS~N~Lp-~vPec 240 (1255)
T KOG0444|consen 164 MLPPQIR--RLSMLQTLKLSNNPLNHFQLRQLPSMTSLSVLHMSNTQRTLDNIPTSLDDLHNLRDVDLSENNLP-IVPEC 240 (1255)
T ss_pred hcCHHHH--HHhhhhhhhcCCChhhHHHHhcCccchhhhhhhcccccchhhcCCCchhhhhhhhhccccccCCC-cchHH
Confidence 7888887 7889999999999664 14553211 14455778889999999999998 78865
Q ss_pred hccCCCCCCEEEccCCCCcccCCCCCCCCceEEeecCCCcccCCCCCCccC
Q 042825 219 SFNNHPKLTTLNLTNNLLQGPTPRFNNSKLTVDMRTGSNCFCLDDPGLACD 269 (631)
Q Consensus 219 ~~~~l~~L~~L~ls~N~l~g~~p~~~~~~~~~~l~~~~n~~~~~~~~~~~~ 269 (631)
+-.+++|+.|+||+|+++..--........-.++++.|+++. .|...|.
T Consensus 241 -ly~l~~LrrLNLS~N~iteL~~~~~~W~~lEtLNlSrNQLt~-LP~avcK 289 (1255)
T KOG0444|consen 241 -LYKLRNLRRLNLSGNKITELNMTEGEWENLETLNLSRNQLTV-LPDAVCK 289 (1255)
T ss_pred -HhhhhhhheeccCcCceeeeeccHHHHhhhhhhccccchhcc-chHHHhh
Confidence 778999999999999987643221111112235668888876 6665554
|
|
| >smart00221 STYKc Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=99.52 E-value=1.7e-13 Score=134.32 Aligned_cols=148 Identities=29% Similarity=0.395 Sum_probs=109.2
Q ss_pred cccceeecCCCceEEEEEEecC-CcEEEEEEEecCCCCHHHHHHHHHHHHHHhc--------------------------
Q 042825 420 FSEENRLGRGGVGTVYKGELKD-GTEVGVKRMELGSVTEQGIAQFESEITVLTK-------------------------- 472 (631)
Q Consensus 420 f~~~~~iG~G~fg~Vyk~~~~~-g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~-------------------------- 472 (631)
|...+.||+|++|.||++...+ ++.+|+|.+...... ...+.+.+|++.+.+
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~ 79 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTE-KQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEYC 79 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccch-HHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEecc
Confidence 4567899999999999999875 889999999765322 245678888887765
Q ss_pred --CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCCccc
Q 042825 473 --GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENGKHS 526 (631)
Q Consensus 473 --gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~~~~ 526 (631)
++|.+++... ...+++.....++.+++++ ..++|+|||.+........ .
T Consensus 80 ~~~~L~~~~~~~----~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~-~ 154 (225)
T smart00221 80 EGGDLFDYLRKK----GGKLSEEEARFYLRQILEALEYLHSLGIVHRDLKPENILLGMDGLVKLADFGLARFIHRDLA-A 154 (225)
T ss_pred CCCCHHHHHHhc----ccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeeCceeeEecCccc-c
Confidence 2455544321 1116777777776666554 4578999999987753210 1
Q ss_pred cccccccCccccccccc-ccCCCCchhhHHHHHHHHHHHHcCCCCCCC
Q 042825 527 ILTKVAGTFGYLAPEYI-VTGRITAKVDVYSFGMILMDLITGRKVVDA 573 (631)
Q Consensus 527 ~~~~~~gt~~Y~aPE~~-~~~~~~~k~DVwS~GvvL~ElltG~~P~~~ 573 (631)
......++..|++||.. ....++.++|||+||++++||++|+.||+.
T Consensus 155 ~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~ 202 (225)
T smart00221 155 LLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSG 202 (225)
T ss_pred cccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence 22345678899999998 666788899999999999999999999975
|
Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. |
| >KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.51 E-value=9.7e-16 Score=137.11 Aligned_cols=152 Identities=26% Similarity=0.464 Sum_probs=106.1
Q ss_pred CCCeEEEEeCCCCCcccCcchhcCCccCceeecccCcccCCCCcCcc---cccccccccccceecCCCCCCcCCCCCCcE
Q 042825 96 DGQVTNIELQDQNRKGTVPPILKKLSSMAVMYLENNQLRGPIPSLVG---SLEFFSAYEANISGTIPDFIGTDTFPQLSY 172 (631)
Q Consensus 96 ~~~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~L~~N~l~g~lP~~~~---~L~~L~l~~n~l~g~ip~~~~~~~l~~L~~ 172 (631)
...++.|.|++|.++ .+|+.+..|.+|++|++++|+++ .+|..++ +|+.|++.-|++. .+|..|| .+|.|+.
T Consensus 32 ~s~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprgfg--s~p~lev 106 (264)
T KOG0617|consen 32 MSNITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRGFG--SFPALEV 106 (264)
T ss_pred hhhhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCccccC--CCchhhh
Confidence 357899999999999 89999999999999999999999 7888776 7888999999998 7999999 8999999
Q ss_pred EEccCCcccc-cCCCCCCCCccCcCCCCCCCEEEeecCcCcccCChhhccCCCCCCEEEccCCCCcccCCCCCCCCceEE
Q 042825 173 LDLGNNNLQG-TIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNNLLQGPTPRFNNSKLTVD 251 (631)
Q Consensus 173 L~Ls~N~l~g-~iP~~~~~~~~~~~~l~~L~~L~L~~N~l~g~iP~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~~~~~~ 251 (631)
|||++|+++. .+|..+ ..+..|+.|+|+.|.|. .+|.. ++.+++|+.|.+..|.|-..+-+........+
T Consensus 107 ldltynnl~e~~lpgnf-------f~m~tlralyl~dndfe-~lp~d-vg~lt~lqil~lrdndll~lpkeig~lt~lre 177 (264)
T KOG0617|consen 107 LDLTYNNLNENSLPGNF-------FYMTTLRALYLGDNDFE-ILPPD-VGKLTNLQILSLRDNDLLSLPKEIGDLTRLRE 177 (264)
T ss_pred hhccccccccccCCcch-------hHHHHHHHHHhcCCCcc-cCChh-hhhhcceeEEeeccCchhhCcHHHHHHHHHHH
Confidence 9999999974 466543 24445555555555554 44443 45555555555555544333222222222333
Q ss_pred eecCCCcccC
Q 042825 252 MRTGSNCFCL 261 (631)
Q Consensus 252 l~~~~n~~~~ 261 (631)
+.+.+|.+.-
T Consensus 178 lhiqgnrl~v 187 (264)
T KOG0617|consen 178 LHIQGNRLTV 187 (264)
T ss_pred Hhcccceeee
Confidence 3444444443
|
|
| >KOG0472 consensus Leucine-rich repeat protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.44 E-value=8.3e-15 Score=147.10 Aligned_cols=226 Identities=19% Similarity=0.209 Sum_probs=139.8
Q ss_pred CCc-eecccceeehhhhcc---ccchhhhhhhhhhhccccccccccCCCCCCCChhhHHHHHHHHHhCCCCCCCCCCCCC
Q 042825 9 SNF-QLFGFPRLTFRDCMT---ATSELEREKTERVQGDRRKKRRKIPSASSNQSRPDAAVMQDLKASFVIPKRLKWSDPD 84 (631)
Q Consensus 9 ~~~-~~~~~~~~~~~~~~~---~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~k~~~~~~~~~~w~~~~ 84 (631)
+++ +|..++.+..-++-. ++...+++++++++.+.|+++ .+| .+...+.+++.-..... .--
T Consensus 62 ~dl~nL~~l~vl~~~~n~l~~lp~aig~l~~l~~l~vs~n~ls-~lp--------~~i~s~~~l~~l~~s~n-----~~~ 127 (565)
T KOG0472|consen 62 EDLKNLACLTVLNVHDNKLSQLPAAIGELEALKSLNVSHNKLS-ELP--------EQIGSLISLVKLDCSSN-----ELK 127 (565)
T ss_pred HhhhcccceeEEEeccchhhhCCHHHHHHHHHHHhhcccchHh-hcc--------HHHhhhhhhhhhhcccc-----cee
Confidence 344 677777777777632 333447899999999999988 333 22222333332211000 001
Q ss_pred CCCccceeeCCCCCeEEEEeCCCCCcccCcchhcCCccCceeecccCcccCCCCcCcc--cccccccccccceecCCCCC
Q 042825 85 PCQWSHVICSDDGQVTNIELQDQNRKGTVPPILKKLSSMAVMYLENNQLRGPIPSLVG--SLEFFSAYEANISGTIPDFI 162 (631)
Q Consensus 85 ~C~w~gv~C~~~~~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~L~~N~l~g~lP~~~~--~L~~L~l~~n~l~g~ip~~~ 162 (631)
.|.-++..| -.+..++..+|+++ ++|+.++++.+|..|++.+|++....|..+. .|+.||.-.|-+. .+|+.+
T Consensus 128 el~~~i~~~---~~l~dl~~~~N~i~-slp~~~~~~~~l~~l~~~~n~l~~l~~~~i~m~~L~~ld~~~N~L~-tlP~~l 202 (565)
T KOG0472|consen 128 ELPDSIGRL---LDLEDLDATNNQIS-SLPEDMVNLSKLSKLDLEGNKLKALPENHIAMKRLKHLDCNSNLLE-TLPPEL 202 (565)
T ss_pred ecCchHHHH---hhhhhhhccccccc-cCchHHHHHHHHHHhhccccchhhCCHHHHHHHHHHhcccchhhhh-cCChhh
Confidence 121122222 13455666667776 6777777777777777777777743333333 6667777666665 677777
Q ss_pred CcCCCCCCcEEEccCCcccccCCCCCC----------------CCccC-cCCCCCCCEEEeecCcCcccCChhhccCCCC
Q 042825 163 GTDTFPQLSYLDLGNNNLQGTIPSSFG----------------MPFAD-ISNLSTLEDLSLGHNKLTGIFPVSSFNNHPK 225 (631)
Q Consensus 163 ~~~~l~~L~~L~Ls~N~l~g~iP~~~~----------------~~~~~-~~~l~~L~~L~L~~N~l~g~iP~~~~~~l~~ 225 (631)
| .|.+|+.|+|.+|++. .+| +|+ +.+.+ ..++++|.+|||..|+++ +.|.. +..+.+
T Consensus 203 g--~l~~L~~LyL~~Nki~-~lP-ef~gcs~L~Elh~g~N~i~~lpae~~~~L~~l~vLDLRdNklk-e~Pde-~clLrs 276 (565)
T KOG0472|consen 203 G--GLESLELLYLRRNKIR-FLP-EFPGCSLLKELHVGENQIEMLPAEHLKHLNSLLVLDLRDNKLK-EVPDE-ICLLRS 276 (565)
T ss_pred c--chhhhHHHHhhhcccc-cCC-CCCccHHHHHHHhcccHHHhhHHHHhcccccceeeeccccccc-cCchH-HHHhhh
Confidence 7 6777777777777777 666 333 12223 347888888888888888 78876 777888
Q ss_pred CCEEEccCCCCcccCCCCCCCCceEEeecCCCccc
Q 042825 226 LTTLNLTNNLLQGPTPRFNNSKLTVDMRTGSNCFC 260 (631)
Q Consensus 226 L~~L~ls~N~l~g~~p~~~~~~~~~~l~~~~n~~~ 260 (631)
|++||+|+|.+++.++....+ -...+.+.+|.+-
T Consensus 277 L~rLDlSNN~is~Lp~sLgnl-hL~~L~leGNPlr 310 (565)
T KOG0472|consen 277 LERLDLSNNDISSLPYSLGNL-HLKFLALEGNPLR 310 (565)
T ss_pred hhhhcccCCccccCCcccccc-eeeehhhcCCchH
Confidence 888888888888888776655 3334455666653
|
|
| >PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional | Back alignment and domain information |
|---|
Probab=99.40 E-value=3.9e-13 Score=151.83 Aligned_cols=162 Identities=17% Similarity=0.212 Sum_probs=71.6
Q ss_pred CCCCCCceecccceeehhhhc-cccchhhhhhhhhhhccccccccccCCCCCCCChhhH--HHHHHHHHhCCCCCCCCCC
Q 042825 5 PWHPSNFQLFGFPRLTFRDCM-TATSELEREKTERVQGDRRKKRRKIPSASSNQSRPDA--AVMQDLKASFVIPKRLKWS 81 (631)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~--~~l~~~k~~~~~~~~~~w~ 81 (631)
-.+|..+. -+++.|.+.++. +.-+. ...+|+.|++++|+++ .+|.........+. ..|..+......-..+ +-
T Consensus 214 tsLP~~l~-~~L~~L~L~~N~Lt~LP~-lp~~Lk~LdLs~N~Lt-sLP~lp~sL~~L~Ls~N~L~~Lp~lp~~L~~L-~L 289 (788)
T PRK15387 214 TTLPDCLP-AHITTLVIPDNNLTSLPA-LPPELRTLEVSGNQLT-SLPVLPPGLLELSIFSNPLTHLPALPSGLCKL-WI 289 (788)
T ss_pred CcCCcchh-cCCCEEEccCCcCCCCCC-CCCCCcEEEecCCccC-cccCcccccceeeccCCchhhhhhchhhcCEE-EC
Confidence 34566552 145666666553 22111 2478999999999999 55543221111000 0011111100000000 00
Q ss_pred CCCCCCccceeeCCCCCeEEEEeCCCCCcccCcchhcCCccCceeecccCcccCCCCcCcccccccccccccceecCCCC
Q 042825 82 DPDPCQWSHVICSDDGQVTNIELQDQNRKGTVPPILKKLSSMAVMYLENNQLRGPIPSLVGSLEFFSAYEANISGTIPDF 161 (631)
Q Consensus 82 ~~~~C~w~gv~C~~~~~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~L~~N~l~g~lP~~~~~L~~L~l~~n~l~g~ip~~ 161 (631)
..|....+.. ....++.|+|++|.+++ +|... .+|+.|++++|+|+ .+|....+|+.|+|++|+|++ +|..
T Consensus 290 --s~N~Lt~LP~-~p~~L~~LdLS~N~L~~-Lp~lp---~~L~~L~Ls~N~L~-~LP~lp~~Lq~LdLS~N~Ls~-LP~l 360 (788)
T PRK15387 290 --FGNQLTSLPV-LPPGLQELSVSDNQLAS-LPALP---SELCKLWAYNNQLT-SLPTLPSGLQELSVSDNQLAS-LPTL 360 (788)
T ss_pred --cCCccccccc-cccccceeECCCCcccc-CCCCc---ccccccccccCccc-cccccccccceEecCCCccCC-CCCC
Confidence 0011111111 12357778888887774 44322 23444555555554 344433455555555555552 4432
Q ss_pred CCcCCCCCCcEEEccCCcccccCC
Q 042825 162 IGTDTFPQLSYLDLGNNNLQGTIP 185 (631)
Q Consensus 162 ~~~~~l~~L~~L~Ls~N~l~g~iP 185 (631)
. ++|+.|++++|+|+ .+|
T Consensus 361 p-----~~L~~L~Ls~N~L~-~LP 378 (788)
T PRK15387 361 P-----SELYKLWAYNNRLT-SLP 378 (788)
T ss_pred C-----cccceehhhccccc-cCc
Confidence 1 23444555555554 344
|
|
| >cd00180 PKc Catalytic domain of Protein Kinases | Back alignment and domain information |
|---|
Probab=99.40 E-value=4.6e-12 Score=122.06 Aligned_cols=158 Identities=32% Similarity=0.524 Sum_probs=118.8
Q ss_pred ecCCCceEEEEEEecC-CcEEEEEEEecCCCCHHHHHHHHHHHHHHhc----------------------------CChh
Q 042825 426 LGRGGVGTVYKGELKD-GTEVGVKRMELGSVTEQGIAQFESEITVLTK----------------------------GTLG 476 (631)
Q Consensus 426 iG~G~fg~Vyk~~~~~-g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~----------------------------gsL~ 476 (631)
||+|++|.||+++..+ ++.+++|+........ ..+.+.+|++.+.+ +++.
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~-~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~ 79 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSS-LLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLK 79 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchh-HHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcHH
Confidence 6899999999999764 8999999997654221 34678888888765 3444
Q ss_pred HHhHhhhhcCCCCCCHHHHHHHHHHhhcC-------------------------CCcEEEeeccccccCCCCcccccccc
Q 042825 477 RHLFNWEEEGLEPLEWNTRLNIALDVARG-------------------------DDMRVADFGLVRLVPENGKHSILTKV 531 (631)
Q Consensus 477 ~~L~~~~~~~~~~L~~~~~~~I~~~ia~g-------------------------~~~kl~DFGla~~~~~~~~~~~~~~~ 531 (631)
+++.. ....+++..+..++.+++++ ..++|+|||.+........ .....
T Consensus 80 ~~~~~----~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~--~~~~~ 153 (215)
T cd00180 80 DLLKE----NEGKLSEDEILRILLQILEGLEYLHSNGIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKS--LLKTI 153 (215)
T ss_pred HHHHh----ccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcc--hhhcc
Confidence 44421 11357777777777776653 3467999999987642211 12345
Q ss_pred ccCcccccccccccC-CCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHhHhhhcCChhHHHHHHhhcCCCh
Q 042825 532 AGTFGYLAPEYIVTG-RITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQKMHKNHDTFQMAIDKTIQLDE 610 (631)
Q Consensus 532 ~gt~~Y~aPE~~~~~-~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~id~~L~~d~ 610 (631)
.+...|++||..... .++.+.|+|++|++++|| ..+.+++..++..+|
T Consensus 154 ~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l-------------------------------~~~~~~l~~~l~~~p 202 (215)
T cd00180 154 VGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL-------------------------------PELKDLIRKMLQKDP 202 (215)
T ss_pred cCCCCccChhHhcccCCCCchhhhHHHHHHHHHH-------------------------------HHHHHHHHHHhhCCc
Confidence 678899999998877 788999999999999999 357889999999999
Q ss_pred hhHHhHHHHHH
Q 042825 611 ENLANVSTVAE 621 (631)
Q Consensus 611 ~~r~~~~~vl~ 621 (631)
.+|+++.++++
T Consensus 203 ~~R~~~~~l~~ 213 (215)
T cd00180 203 EKRPSAKEILE 213 (215)
T ss_pred ccCcCHHHHhh
Confidence 99999988765
|
Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which |
| >KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.40 E-value=5.3e-13 Score=130.97 Aligned_cols=193 Identities=20% Similarity=0.288 Sum_probs=127.4
Q ss_pred CCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc------------------------
Q 042825 418 NNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK------------------------ 472 (631)
Q Consensus 418 ~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~------------------------ 472 (631)
.+|.....+|.|+- .|..+... .++.||+|++..........++..+|..++..
T Consensus 17 ~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~e 95 (369)
T KOG0665|consen 17 KRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQE 95 (369)
T ss_pred eeeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHHh
Confidence 45667788888887 56655533 48899999987654444455666777666654
Q ss_pred ---------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeecccccc
Q 042825 473 ---------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLV 519 (631)
Q Consensus 473 ---------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~ 519 (631)
.++.+.++ ..++..+...|..|+..| ..+||.|||+|+..
T Consensus 96 ~y~v~e~m~~nl~~vi~-------~elDH~tis~i~yq~~~~ik~lhs~~IihRdLkPsnivv~~~~~lKi~dfg~ar~e 168 (369)
T KOG0665|consen 96 VYLVMELMDANLCQVIL-------MELDHETISYILYQMLCGIKHLHSAGIIHRDLKPSNIVVNSDCTLKILDFGLARTE 168 (369)
T ss_pred HHHHHHhhhhHHHHHHH-------HhcchHHHHHHHHHHHHHHHHHHhcceeecccCcccceecchhheeeccchhhccc
Confidence 22222221 123333333444444433 45789999999865
Q ss_pred CCCCccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCC--------------ChHHHHHHH
Q 042825 520 PENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHS--------------DPEYIIHLA 585 (631)
Q Consensus 520 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~--------------~~~~~~~l~ 585 (631)
. ..-..+..+.|..|.|||++.+..|.+.+||||.||++.||++|+--|.+... ++.....+.
T Consensus 169 ~---~~~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd~~F~~qL~ 245 (369)
T KOG0665|consen 169 D---TDFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTPDPSFMKQLQ 245 (369)
T ss_pred C---cccccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHHhcCCCHHHHHHhh
Confidence 3 22356778899999999999988899999999999999999999988875321 111111111
Q ss_pred HHhHh---------------hh-------------cCChhHHHHHHhhcCCChhhHHhHHHHHH
Q 042825 586 TWFQK---------------MH-------------KNHDTFQMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 586 ~~~~~---------------~~-------------~~~~~l~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
.-++. .+ .....+++++.+||..+|++|.++.++++
T Consensus 246 ~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~ 309 (369)
T KOG0665|consen 246 PTVRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALR 309 (369)
T ss_pred HHHHHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhc
Confidence 11110 00 01235789999999999999999988764
|
|
| >KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=99.39 E-value=1.3e-14 Score=152.51 Aligned_cols=212 Identities=22% Similarity=0.287 Sum_probs=133.9
Q ss_pred CCCCCc-eecccceeehhhhcc---ccchh-hhhhhhhhhccccccccccCCCCCCCChhhHH-----HHHHHHHhCCCC
Q 042825 6 WHPSNF-QLFGFPRLTFRDCMT---ATSEL-EREKTERVQGDRRKKRRKIPSASSNQSRPDAA-----VMQDLKASFVIP 75 (631)
Q Consensus 6 ~~~~~~-~~~~~~~~~~~~~~~---~~~~~-~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~-----~l~~~k~~~~~~ 75 (631)
+.|.|. .--++..|.+.++.. +.+.. +++.|-.|++++|.+. ++|+..-.....+.. -|..|...-. |
T Consensus 117 EvP~~LE~AKn~iVLNLS~N~IetIPn~lfinLtDLLfLDLS~NrLe-~LPPQ~RRL~~LqtL~Ls~NPL~hfQLrQL-P 194 (1255)
T KOG0444|consen 117 EVPTNLEYAKNSIVLNLSYNNIETIPNSLFINLTDLLFLDLSNNRLE-MLPPQIRRLSMLQTLKLSNNPLNHFQLRQL-P 194 (1255)
T ss_pred hcchhhhhhcCcEEEEcccCccccCCchHHHhhHhHhhhccccchhh-hcCHHHHHHhhhhhhhcCCChhhHHHHhcC-c
Confidence 456666 555666677766653 33322 7899999999999998 333221111110000 0111110000 1
Q ss_pred C--CC---CCCCC------CCCCccceeeCCCCCeEEEEeCCCCCcccCcchhcCCccCceeecccCcccCCCCcCcc--
Q 042825 76 K--RL---KWSDP------DPCQWSHVICSDDGQVTNIELQDQNRKGTVPPILKKLSSMAVMYLENNQLRGPIPSLVG-- 142 (631)
Q Consensus 76 ~--~~---~w~~~------~~C~w~gv~C~~~~~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~L~~N~l~g~lP~~~~-- 142 (631)
. .+ .-+++ -|-+. ++..++..+||+.|+|. .+|+.+.++.+|+.|+||+|+|+ .+....+
T Consensus 195 smtsL~vLhms~TqRTl~N~Ptsl-----d~l~NL~dvDlS~N~Lp-~vPecly~l~~LrrLNLS~N~it-eL~~~~~~W 267 (1255)
T KOG0444|consen 195 SMTSLSVLHMSNTQRTLDNIPTSL-----DDLHNLRDVDLSENNLP-IVPECLYKLRNLRRLNLSGNKIT-ELNMTEGEW 267 (1255)
T ss_pred cchhhhhhhcccccchhhcCCCch-----hhhhhhhhccccccCCC-cchHHHhhhhhhheeccCcCcee-eeeccHHHH
Confidence 0 00 00110 11111 22347788999999999 89999999999999999999998 4544433
Q ss_pred -cccccccccccceecCCCCCCcCCCCCCcEEEccCCccc-ccCCCCCCCCccCcCCCCCCCEEEeecCcCcccCChhhc
Q 042825 143 -SLEFFSAYEANISGTIPDFIGTDTFPQLSYLDLGNNNLQ-GTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSF 220 (631)
Q Consensus 143 -~L~~L~l~~n~l~g~ip~~~~~~~l~~L~~L~Ls~N~l~-g~iP~~~~~~~~~~~~l~~L~~L~L~~N~l~g~iP~~~~ 220 (631)
+|+.|+||.|+++ .+|+.+. .|++|+.|.+.+|+|+ ..||+.+| .|.+|+++.+++|+|. .+|++ +
T Consensus 268 ~~lEtLNlSrNQLt-~LP~avc--KL~kL~kLy~n~NkL~FeGiPSGIG-------KL~~Levf~aanN~LE-lVPEg-l 335 (1255)
T KOG0444|consen 268 ENLETLNLSRNQLT-VLPDAVC--KLTKLTKLYANNNKLTFEGIPSGIG-------KLIQLEVFHAANNKLE-LVPEG-L 335 (1255)
T ss_pred hhhhhhccccchhc-cchHHHh--hhHHHHHHHhccCcccccCCccchh-------hhhhhHHHHhhccccc-cCchh-h
Confidence 8999999999998 7899988 8999999999999886 35777765 5556666666666655 55554 5
Q ss_pred cCCCCCCEEEccCCCCcc
Q 042825 221 NNHPKLTTLNLTNNLLQG 238 (631)
Q Consensus 221 ~~l~~L~~L~ls~N~l~g 238 (631)
+.+..|+.|.|++|+|-.
T Consensus 336 cRC~kL~kL~L~~NrLiT 353 (1255)
T KOG0444|consen 336 CRCVKLQKLKLDHNRLIT 353 (1255)
T ss_pred hhhHHHHHhcccccceee
Confidence 555666666666665543
|
|
| >KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.38 E-value=4.8e-13 Score=140.09 Aligned_cols=146 Identities=21% Similarity=0.272 Sum_probs=106.2
Q ss_pred CCcccceeecCCCceEEEEEEecC-CcEEEEEEEecCCCCH------HHHHHHHHHHHHHhc------------------
Q 042825 418 NNFSEENRLGRGGVGTVYKGELKD-GTEVGVKRMELGSVTE------QGIAQFESEITVLTK------------------ 472 (631)
Q Consensus 418 ~~f~~~~~iG~G~fg~Vyk~~~~~-g~~vAvK~l~~~~~~~------~~~~~~~~Ei~~l~~------------------ 472 (631)
.+|...+.+|+|+||.|+.|.++. ...|+||.+.++.+-. +..-..-.||++|..
T Consensus 561 s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFEd 640 (772)
T KOG1152|consen 561 SDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFED 640 (772)
T ss_pred ccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheeec
Confidence 458889999999999999999774 6789999987654321 111234568888765
Q ss_pred --------------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeec
Q 042825 473 --------------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFG 514 (631)
Q Consensus 473 --------------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFG 514 (631)
-+|++++ +-...++.....-|..|++.| +-+|+.|||
T Consensus 641 dd~yyl~te~hg~gIDLFd~I-----E~kp~m~E~eAk~IFkQV~agi~hlh~~~ivhrdikdenvivd~~g~~klidfg 715 (772)
T KOG1152|consen 641 DDYYYLETEVHGEGIDLFDFI-----EFKPRMDEPEAKLIFKQVVAGIKHLHDQGIVHRDIKDENVIVDSNGFVKLIDFG 715 (772)
T ss_pred CCeeEEEecCCCCCcchhhhh-----hccCccchHHHHHHHHHHHhccccccccCceecccccccEEEecCCeEEEeecc
Confidence 1222222 112345555555666666655 446899999
Q ss_pred cccccCCCCccccccccccCcccccccccccCCCC-chhhHHHHHHHHHHHHcCCCCCC
Q 042825 515 LVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRIT-AKVDVYSFGMILMDLITGRKVVD 572 (631)
Q Consensus 515 la~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~-~k~DVwS~GvvL~ElltG~~P~~ 572 (631)
-|.... ......++||.+|.|||++.+.+|- ..-|||++||+||.++..+.||.
T Consensus 716 saa~~k----sgpfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyy 770 (772)
T KOG1152|consen 716 SAAYTK----SGPFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYY 770 (772)
T ss_pred chhhhc----CCCcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCc
Confidence 997663 2346678999999999999998874 56899999999999999999986
|
|
| >KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.36 E-value=9.4e-13 Score=126.30 Aligned_cols=193 Identities=18% Similarity=0.249 Sum_probs=125.0
Q ss_pred CCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc------------------------
Q 042825 418 NNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK------------------------ 472 (631)
Q Consensus 418 ~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~------------------------ 472 (631)
+.|.+.+.+|+|.||.+-.++++ ..+.+++|.+..... ..++|.+|...--.
T Consensus 24 d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~t---t~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF~ 100 (378)
T KOG1345|consen 24 DVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQT---TQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVFV 100 (378)
T ss_pred hhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcchh---hHHHHHHHhccceeeccchhhhHHHHHHhhcCceEEEe
Confidence 56888899999999999999977 478899998876543 35778888643211
Q ss_pred ------CChhHHhHh----------hhhcCCCCCCHHHHHHHHHHhhcC----------CCcEEEeeccccccCCCCccc
Q 042825 473 ------GTLGRHLFN----------WEEEGLEPLEWNTRLNIALDVARG----------DDMRVADFGLVRLVPENGKHS 526 (631)
Q Consensus 473 ------gsL~~~L~~----------~~~~~~~~L~~~~~~~I~~~ia~g----------~~~kl~DFGla~~~~~~~~~~ 526 (631)
|+|...+.. ...+-...+++.|..++++...+. ..+|++|||+.+....
T Consensus 101 qE~aP~gdL~snv~~~GigE~~~K~v~~ql~SAi~fMHsknlVHRdlK~eNiLif~~df~rvKlcDFG~t~k~g~----- 175 (378)
T KOG1345|consen 101 QEFAPRGDLRSNVEAAGIGEANTKKVFAQLLSAIEFMHSKNLVHRDLKAENILIFDADFYRVKLCDFGLTRKVGT----- 175 (378)
T ss_pred eccCccchhhhhcCcccccHHHHHHHHHHHHHHHHHhhccchhhcccccceEEEecCCccEEEeeecccccccCc-----
Confidence 444443321 001112234445555555444443 3468999999986531
Q ss_pred cccccccCcccccccccccC-----CCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHhHhh--------hc
Q 042825 527 ILTKVAGTFGYLAPEYIVTG-----RITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQKM--------HK 593 (631)
Q Consensus 527 ~~~~~~gt~~Y~aPE~~~~~-----~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~~~~--------~~ 593 (631)
......-+..|-+||..... ...+.+|||.|||+++.++||+.||...............|.... -.
T Consensus 176 tV~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~~~~~w~~rk~~~~P~~F~~ 255 (378)
T KOG1345|consen 176 TVKYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPYWEWEQWLKRKNPALPKKFNP 255 (378)
T ss_pred eehhhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccCchHHHHHHHhcccCccCchhhcc
Confidence 12223345678899986532 357789999999999999999999985433322333344554322 12
Q ss_pred CChhHHHHHHhhcCCChhhHHhHHH
Q 042825 594 NHDTFQMAIDKTIQLDEENLANVST 618 (631)
Q Consensus 594 ~~~~l~~~id~~L~~d~~~r~~~~~ 618 (631)
-++.+..++.+.+..++++|--+.+
T Consensus 256 fs~~a~r~Fkk~lt~~~~drcki~~ 280 (378)
T KOG1345|consen 256 FSEKALRLFKKSLTPRFKDRCKIWT 280 (378)
T ss_pred cCHHHHHHHHHhcCCcccccchhHH
Confidence 2467889999999888888744433
|
|
| >PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional | Back alignment and domain information |
|---|
Probab=99.34 E-value=2.3e-12 Score=145.64 Aligned_cols=139 Identities=21% Similarity=0.317 Sum_probs=100.9
Q ss_pred CeEEEEeCCCCCcccCcchhcCCccCceeecccCcccCCCCcCcccccccccccccceecCCCCCCcCCCCCCcEEEccC
Q 042825 98 QVTNIELQDQNRKGTVPPILKKLSSMAVMYLENNQLRGPIPSLVGSLEFFSAYEANISGTIPDFIGTDTFPQLSYLDLGN 177 (631)
Q Consensus 98 ~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~L~~N~l~g~lP~~~~~L~~L~l~~n~l~g~ip~~~~~~~l~~L~~L~Ls~ 177 (631)
.+..|++++|++++ +|.. ..+|++|+|++|+|+ .+|....+|+.|++++|+++ .+|.. .++|+.|+|++
T Consensus 323 ~L~~L~Ls~N~L~~-LP~l---p~~Lq~LdLS~N~Ls-~LP~lp~~L~~L~Ls~N~L~-~LP~l-----~~~L~~LdLs~ 391 (788)
T PRK15387 323 ELCKLWAYNNQLTS-LPTL---PSGLQELSVSDNQLA-SLPTLPSELYKLWAYNNRLT-SLPAL-----PSGLKELIVSG 391 (788)
T ss_pred cccccccccCcccc-cccc---ccccceEecCCCccC-CCCCCCcccceehhhccccc-cCccc-----ccccceEEecC
Confidence 57778888888874 6642 247888999999988 57776678888888888888 47753 24688889999
Q ss_pred CcccccCCCCCCCCccCcCCCCCCCEEEeecCcCcccCChhhccCCCCCCEEEccCCCCcccCCC-CCCCCceEEeecCC
Q 042825 178 NNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNNLLQGPTPR-FNNSKLTVDMRTGS 256 (631)
Q Consensus 178 N~l~g~iP~~~~~~~~~~~~l~~L~~L~L~~N~l~g~iP~~~~~~l~~L~~L~ls~N~l~g~~p~-~~~~~~~~~l~~~~ 256 (631)
|+|+ .+|.. .++|+.|+|++|+|+ .+|.. ..+|+.|+|++|+|+. +|. +..+.....+++++
T Consensus 392 N~Lt-~LP~l----------~s~L~~LdLS~N~Ls-sIP~l----~~~L~~L~Ls~NqLt~-LP~sl~~L~~L~~LdLs~ 454 (788)
T PRK15387 392 NRLT-SLPVL----------PSELKELMVSGNRLT-SLPML----PSGLLSLSVYRNQLTR-LPESLIHLSSETTVNLEG 454 (788)
T ss_pred Cccc-CCCCc----------ccCCCEEEccCCcCC-CCCcc----hhhhhhhhhccCcccc-cChHHhhccCCCeEECCC
Confidence 9888 57743 257888889999888 57742 2467888888888884 454 33333444567788
Q ss_pred CcccCCCC
Q 042825 257 NCFCLDDP 264 (631)
Q Consensus 257 n~~~~~~~ 264 (631)
|+|++..+
T Consensus 455 N~Ls~~~~ 462 (788)
T PRK15387 455 NPLSERTL 462 (788)
T ss_pred CCCCchHH
Confidence 88887544
|
|
| >KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.33 E-value=3e-13 Score=143.77 Aligned_cols=201 Identities=21% Similarity=0.303 Sum_probs=130.1
Q ss_pred hhcCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc---------------------
Q 042825 415 NATNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK--------------------- 472 (631)
Q Consensus 415 ~~t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~--------------------- 472 (631)
...++|+....+|.|.||.|||++.. .++..|||.++...-. ...-...|+.+++.
T Consensus 12 nP~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~d--d~~~iqqei~~~~dc~h~nivay~gsylr~dklwi 89 (829)
T KOG0576|consen 12 NPQDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGD--DFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWI 89 (829)
T ss_pred CCccchhheeeecCCcccchhhhcccccCchhhheeeeccCCc--cccccccceeeeecCCCcChHHHHhhhhhhcCcEE
Confidence 34567888999999999999999965 5899999999865322 23344555554443
Q ss_pred -------CChhHHhHh-----------hhhcCCCCCCHHHHHHHHHHhhcC--------CCcEEEeeccccccCCCCccc
Q 042825 473 -------GTLGRHLFN-----------WEEEGLEPLEWNTRLNIALDVARG--------DDMRVADFGLVRLVPENGKHS 526 (631)
Q Consensus 473 -------gsL~~~L~~-----------~~~~~~~~L~~~~~~~I~~~ia~g--------~~~kl~DFGla~~~~~~~~~~ 526 (631)
|+|.+..|. ..++....+.+.|...-++..++| +++|++|||.+..+. ..-.
T Consensus 90 cMEycgggslQdiy~~TgplselqiayvcRetl~gl~ylhs~gk~hRdiKGanilltd~gDvklaDfgvsaqit--ati~ 167 (829)
T KOG0576|consen 90 CMEYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLKYLHSQGKIHRDIKGANILLTDEGDVKLADFGVSAQIT--ATIA 167 (829)
T ss_pred EEEecCCCcccceeeecccchhHHHHHHHhhhhccchhhhcCCcccccccccceeecccCceeecccCchhhhh--hhhh
Confidence 444433221 112233445554444433334444 678999999987653 2222
Q ss_pred cccccccCcccccccccc---cCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHH--HhH-hhhc----CCh
Q 042825 527 ILTKVAGTFGYLAPEYIV---TGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLAT--WFQ-KMHK----NHD 596 (631)
Q Consensus 527 ~~~~~~gt~~Y~aPE~~~---~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~--~~~-~~~~----~~~ 596 (631)
....+.||+.|||||+.. .+.|..++|||+.|+...|+---+.|..+.... ....+.. -.. ..++ -.+
T Consensus 168 KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpm--r~l~LmTkS~~qpp~lkDk~kws~ 245 (829)
T KOG0576|consen 168 KRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPM--RALFLMTKSGFQPPTLKDKTKWSE 245 (829)
T ss_pred hhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchH--HHHHHhhccCCCCCcccCCccchH
Confidence 345689999999999874 446999999999999999998888775433222 1111111 000 0111 124
Q ss_pred hHHHHHHhhcCCChhhHHhHHHHHH
Q 042825 597 TFQMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 597 ~l~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
-+.+++..++..+|+.|+++..++.
T Consensus 246 ~fh~fvK~altknpKkRptaeklL~ 270 (829)
T KOG0576|consen 246 FFHNFVKGALTKNPKKRPTAEKLLQ 270 (829)
T ss_pred HHHHHHHHHhcCCCccCCChhhhee
Confidence 6788999999999999998877553
|
|
| >KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.33 E-value=4.9e-13 Score=140.10 Aligned_cols=152 Identities=19% Similarity=0.243 Sum_probs=78.2
Q ss_pred CeEEEEeCCCCCcccCcchhcCCccCceeecccCcccCCCCcC----cccccccccccccc-------------------
Q 042825 98 QVTNIELQDQNRKGTVPPILKKLSSMAVMYLENNQLRGPIPSL----VGSLEFFSAYEANI------------------- 154 (631)
Q Consensus 98 ~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~L~~N~l~g~lP~~----~~~L~~L~l~~n~l------------------- 154 (631)
++..|+|++|.++..--..|.+|.+|.+|.|++|+++ .+|.. +.+|+.|+|..|++
T Consensus 174 ni~~L~La~N~It~l~~~~F~~lnsL~tlkLsrNrit-tLp~r~Fk~L~~L~~LdLnrN~irive~ltFqgL~Sl~nlkl 252 (873)
T KOG4194|consen 174 NIKKLNLASNRITTLETGHFDSLNSLLTLKLSRNRIT-TLPQRSFKRLPKLESLDLNRNRIRIVEGLTFQGLPSLQNLKL 252 (873)
T ss_pred CceEEeeccccccccccccccccchheeeecccCccc-ccCHHHhhhcchhhhhhccccceeeehhhhhcCchhhhhhhh
Confidence 5566666666665333345555556666666666665 44432 12455555555554
Q ss_pred -----eecCCCCCCcCCCCCCcEEEccCCcccccCCCCCCCCccCcCCCCCCCEEEeecCcCcccCChhhccCCCCCCEE
Q 042825 155 -----SGTIPDFIGTDTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTL 229 (631)
Q Consensus 155 -----~g~ip~~~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~~~~~~~~l~~L~~L~L~~N~l~g~iP~~~~~~l~~L~~L 229 (631)
+.---..|- .|.++++|+|+.|+++ .+-..+ +.+|++|+.|+||+|.+...-++ .+...++|+.|
T Consensus 253 qrN~I~kL~DG~Fy--~l~kme~l~L~~N~l~-~vn~g~------lfgLt~L~~L~lS~NaI~rih~d-~WsftqkL~~L 322 (873)
T KOG4194|consen 253 QRNDISKLDDGAFY--GLEKMEHLNLETNRLQ-AVNEGW------LFGLTSLEQLDLSYNAIQRIHID-SWSFTQKLKEL 322 (873)
T ss_pred hhcCcccccCccee--eecccceeecccchhh-hhhccc------ccccchhhhhccchhhhheeecc-hhhhcccceeE
Confidence 311111111 3455556666666665 444333 45666666666666666632232 35556666666
Q ss_pred EccCCCCcccCCCCCCC-CceEEeecCCCccc
Q 042825 230 NLTNNLLQGPTPRFNNS-KLTVDMRTGSNCFC 260 (631)
Q Consensus 230 ~ls~N~l~g~~p~~~~~-~~~~~l~~~~n~~~ 260 (631)
+|++|+++...+..+.. ..+..|.+++|.+.
T Consensus 323 dLs~N~i~~l~~~sf~~L~~Le~LnLs~Nsi~ 354 (873)
T KOG4194|consen 323 DLSSNRITRLDEGSFRVLSQLEELNLSHNSID 354 (873)
T ss_pred eccccccccCChhHHHHHHHhhhhcccccchH
Confidence 66666666555543322 22233445666553
|
|
| >KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.33 E-value=9.9e-14 Score=124.36 Aligned_cols=134 Identities=23% Similarity=0.412 Sum_probs=116.4
Q ss_pred CeEEEEeCCCCCcccCcchhcCCccCceeecccCcccCCCCcCcc---ccccccccccccee-cCCCCCCcCCCCCCcEE
Q 042825 98 QVTNIELQDQNRKGTVPPILKKLSSMAVMYLENNQLRGPIPSLVG---SLEFFSAYEANISG-TIPDFIGTDTFPQLSYL 173 (631)
Q Consensus 98 ~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~L~~N~l~g~lP~~~~---~L~~L~l~~n~l~g-~ip~~~~~~~l~~L~~L 173 (631)
+++.|++.+|++. .+|.+++.|+.|+.|+++-|++. .+|..|| .|+.|||..|+++. .+|..|. .++.|+.|
T Consensus 57 nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~levldltynnl~e~~lpgnff--~m~tlral 132 (264)
T KOG0617|consen 57 NLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPALEVLDLTYNNLNENSLPGNFF--YMTTLRAL 132 (264)
T ss_pred hhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCccccCCCchhhhhhccccccccccCCcchh--HHHHHHHH
Confidence 4677888888888 79999999999999999999998 7888877 68899999999864 4787776 67889999
Q ss_pred EccCCcccccCCCCCCCCccCcCCCCCCCEEEeecCcCcccCChhhccCCCCCCEEEccCCCCcccCCCCCC
Q 042825 174 DLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNNLLQGPTPRFNN 245 (631)
Q Consensus 174 ~Ls~N~l~g~iP~~~~~~~~~~~~l~~L~~L~L~~N~l~g~iP~~~~~~l~~L~~L~ls~N~l~g~~p~~~~ 245 (631)
.|+.|.|. -+|+.+ +++++|+.|.+..|.+- ++|.. ++.+..|+.|++.+|+|+-.+|+...
T Consensus 133 yl~dndfe-~lp~dv-------g~lt~lqil~lrdndll-~lpke-ig~lt~lrelhiqgnrl~vlppel~~ 194 (264)
T KOG0617|consen 133 YLGDNDFE-ILPPDV-------GKLTNLQILSLRDNDLL-SLPKE-IGDLTRLRELHIQGNRLTVLPPELAN 194 (264)
T ss_pred HhcCCCcc-cCChhh-------hhhcceeEEeeccCchh-hCcHH-HHHHHHHHHHhcccceeeecChhhhh
Confidence 99999998 888665 59999999999999998 89976 89999999999999999988887654
|
|
| >KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.33 E-value=1.6e-13 Score=143.76 Aligned_cols=210 Identities=19% Similarity=0.152 Sum_probs=113.6
Q ss_pred ccceeehhhhc-c-c--cchhhhhhhhhhhccccccccccCCCCCCCChhhHHHHHHHHHhCCCCCCCCCCCCCCCCccc
Q 042825 15 GFPRLTFRDCM-T-A--TSELEREKTERVQGDRRKKRRKIPSASSNQSRPDAAVMQDLKASFVIPKRLKWSDPDPCQWSH 90 (631)
Q Consensus 15 ~~~~~~~~~~~-~-~--~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~k~~~~~~~~~~w~~~~~C~w~g 90 (631)
+|..+.+-.+- | . .....+.+|+.|+|.+|.+.-.--.+...... |..+|..-.+-..+ .+ |
T Consensus 198 sL~tlkLsrNrittLp~r~Fk~L~~L~~LdLnrN~irive~ltFqgL~S-----l~nlklqrN~I~kL--~D-------G 263 (873)
T KOG4194|consen 198 SLLTLKLSRNRITTLPQRSFKRLPKLESLDLNRNRIRIVEGLTFQGLPS-----LQNLKLQRNDISKL--DD-------G 263 (873)
T ss_pred hheeeecccCcccccCHHHhhhcchhhhhhccccceeeehhhhhcCchh-----hhhhhhhhcCcccc--cC-------c
Confidence 55555554442 2 2 22335789999999999887322222222222 33333222111111 00 1
Q ss_pred eeeCCCCCeEEEEeCCCCCcccCcchhcCCccCceeecccCcccCCCCcCcc---cccccccccccceecCCCCCC----
Q 042825 91 VICSDDGQVTNIELQDQNRKGTVPPILKKLSSMAVMYLENNQLRGPIPSLVG---SLEFFSAYEANISGTIPDFIG---- 163 (631)
Q Consensus 91 v~C~~~~~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~L~~N~l~g~lP~~~~---~L~~L~l~~n~l~g~ip~~~~---- 163 (631)
+.- ....+.+|+|+.|++..--..++.+|+.|++|+||+|.+...-++.+. +|+.|+|++|+++..-+.++.
T Consensus 264 ~Fy-~l~kme~l~L~~N~l~~vn~g~lfgLt~L~~L~lS~NaI~rih~d~WsftqkL~~LdLs~N~i~~l~~~sf~~L~~ 342 (873)
T KOG4194|consen 264 AFY-GLEKMEHLNLETNRLQAVNEGWLFGLTSLEQLDLSYNAIQRIHIDSWSFTQKLKELDLSSNRITRLDEGSFRVLSQ 342 (873)
T ss_pred cee-eecccceeecccchhhhhhcccccccchhhhhccchhhhheeecchhhhcccceeEeccccccccCChhHHHHHHH
Confidence 100 112455666666666544444555566666666666655543343332 555555555555532222222
Q ss_pred ------------------cCCCCCCcEEEccCCcccccCCCCCCCCccCcCCCCCCCEEEeecCcCcccCChhhccCCCC
Q 042825 164 ------------------TDTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPK 225 (631)
Q Consensus 164 ------------------~~~l~~L~~L~Ls~N~l~g~iP~~~~~~~~~~~~l~~L~~L~L~~N~l~g~iP~~~~~~l~~ 225 (631)
...+++|+.|||++|.+++.|-.... .+..|++|+.|+|.+|+|. .||...|..+.+
T Consensus 343 Le~LnLs~Nsi~~l~e~af~~lssL~~LdLr~N~ls~~IEDaa~----~f~gl~~LrkL~l~gNqlk-~I~krAfsgl~~ 417 (873)
T KOG4194|consen 343 LEELNLSHNSIDHLAEGAFVGLSSLHKLDLRSNELSWCIEDAAV----AFNGLPSLRKLRLTGNQLK-SIPKRAFSGLEA 417 (873)
T ss_pred hhhhcccccchHHHHhhHHHHhhhhhhhcCcCCeEEEEEecchh----hhccchhhhheeecCceee-ecchhhhccCcc
Confidence 01355666677777777666655321 2556777777788888777 777767777778
Q ss_pred CCEEEccCCCCcccCCCCC
Q 042825 226 LTTLNLTNNLLQGPTPRFN 244 (631)
Q Consensus 226 L~~L~ls~N~l~g~~p~~~ 244 (631)
|+.|||.+|.+...-|..+
T Consensus 418 LE~LdL~~NaiaSIq~nAF 436 (873)
T KOG4194|consen 418 LEHLDLGDNAIASIQPNAF 436 (873)
T ss_pred cceecCCCCcceeeccccc
Confidence 8888888887777666543
|
|
| >PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional | Back alignment and domain information |
|---|
Probab=99.31 E-value=1.9e-12 Score=147.14 Aligned_cols=202 Identities=18% Similarity=0.365 Sum_probs=131.7
Q ss_pred cceeehhhhc-cccchhhhhhhhhhhccccccccccCCCCCCCChhhHHHHHHHHHhCCCCCCCCCCCCCCCCccceeeC
Q 042825 16 FPRLTFRDCM-TATSELEREKTERVQGDRRKKRRKIPSASSNQSRPDAAVMQDLKASFVIPKRLKWSDPDPCQWSHVICS 94 (631)
Q Consensus 16 ~~~~~~~~~~-~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~k~~~~~~~~~~w~~~~~C~w~gv~C~ 94 (631)
+..|.+.++. +.-+..-..+|+.|++++|+++ .+|..... .|..+..... .+. ...+..
T Consensus 201 L~~L~Ls~N~LtsLP~~l~~nL~~L~Ls~N~Lt-sLP~~l~~-------~L~~L~Ls~N---~L~-------~LP~~l-- 260 (754)
T PRK15370 201 ITTLILDNNELKSLPENLQGNIKTLYANSNQLT-SIPATLPD-------TIQEMELSIN---RIT-------ELPERL-- 260 (754)
T ss_pred CcEEEecCCCCCcCChhhccCCCEEECCCCccc-cCChhhhc-------cccEEECcCC---ccC-------cCChhH--
Confidence 4455555553 2212222368999999999998 55543211 0111110000 000 000001
Q ss_pred CCCCeEEEEeCCCCCcccCcchhcCCccCceeecccCcccCCCCcCcc-cccccccccccceecCCCCCCcCCCCCCcEE
Q 042825 95 DDGQVTNIELQDQNRKGTVPPILKKLSSMAVMYLENNQLRGPIPSLVG-SLEFFSAYEANISGTIPDFIGTDTFPQLSYL 173 (631)
Q Consensus 95 ~~~~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~L~~N~l~g~lP~~~~-~L~~L~l~~n~l~g~ip~~~~~~~l~~L~~L 173 (631)
...++.|+|++|+++ .+|..+. .+|+.|+|++|+|+ .+|..+. +|+.|++++|+++ .+|..+. ++|+.|
T Consensus 261 -~s~L~~L~Ls~N~L~-~LP~~l~--~sL~~L~Ls~N~Lt-~LP~~lp~sL~~L~Ls~N~Lt-~LP~~l~----~sL~~L 330 (754)
T PRK15370 261 -PSALQSLDLFHNKIS-CLPENLP--EELRYLSVYDNSIR-TLPAHLPSGITHLNVQSNSLT-ALPETLP----PGLKTL 330 (754)
T ss_pred -hCCCCEEECcCCccC-ccccccC--CCCcEEECCCCccc-cCcccchhhHHHHHhcCCccc-cCCcccc----ccceec
Confidence 136888999999988 5787664 47899999999998 4676555 7889999999988 4676543 589999
Q ss_pred EccCCcccccCCCCCCCCccCcCCCCCCCEEEeecCcCcccCChhhccCCCCCCEEEccCCCCcccCCCCCCCCceEEee
Q 042825 174 DLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNNLLQGPTPRFNNSKLTVDMR 253 (631)
Q Consensus 174 ~Ls~N~l~g~iP~~~~~~~~~~~~l~~L~~L~L~~N~l~g~iP~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~~~~~~l~ 253 (631)
++++|.|+ .+|..+ .++|+.|+|++|+|+ .+|.. + .++|+.|+|++|+|+..++.... ....++
T Consensus 331 ~Ls~N~Lt-~LP~~l---------~~sL~~L~Ls~N~L~-~LP~~-l--p~~L~~LdLs~N~Lt~LP~~l~~--sL~~Ld 394 (754)
T PRK15370 331 EAGENALT-SLPASL---------PPELQVLDVSKNQIT-VLPET-L--PPTITTLDVSRNALTNLPENLPA--ALQIMQ 394 (754)
T ss_pred cccCCccc-cCChhh---------cCcccEEECCCCCCC-cCChh-h--cCCcCEEECCCCcCCCCCHhHHH--HHHHHh
Confidence 99999998 588654 268999999999998 68864 3 36899999999999865444322 233456
Q ss_pred cCCCcccCCCC
Q 042825 254 TGSNCFCLDDP 264 (631)
Q Consensus 254 ~~~n~~~~~~~ 264 (631)
+++|++.. +|
T Consensus 395 Ls~N~L~~-LP 404 (754)
T PRK15370 395 ASRNNLVR-LP 404 (754)
T ss_pred hccCCccc-Cc
Confidence 68888874 44
|
|
| >PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional | Back alignment and domain information |
|---|
Probab=99.28 E-value=8.4e-12 Score=141.85 Aligned_cols=142 Identities=23% Similarity=0.418 Sum_probs=109.6
Q ss_pred CeEEEEeCCCCCcccCcchhcCCccCceeecccCcccCCCCcCcc-cccccccccccceecCCCCCCcCCCCCCcEEEcc
Q 042825 98 QVTNIELQDQNRKGTVPPILKKLSSMAVMYLENNQLRGPIPSLVG-SLEFFSAYEANISGTIPDFIGTDTFPQLSYLDLG 176 (631)
Q Consensus 98 ~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~L~~N~l~g~lP~~~~-~L~~L~l~~n~l~g~ip~~~~~~~l~~L~~L~Ls 176 (631)
.++.|+|++|++. .+|..+. ++|+.|+|++|+|+ .+|..+. +|+.|++++|+|+ .+|..+. ++|+.|+|+
T Consensus 242 ~L~~L~Ls~N~L~-~LP~~l~--s~L~~L~Ls~N~L~-~LP~~l~~sL~~L~Ls~N~Lt-~LP~~lp----~sL~~L~Ls 312 (754)
T PRK15370 242 TIQEMELSINRIT-ELPERLP--SALQSLDLFHNKIS-CLPENLPEELRYLSVYDNSIR-TLPAHLP----SGITHLNVQ 312 (754)
T ss_pred cccEEECcCCccC-cCChhHh--CCCCEEECcCCccC-ccccccCCCCcEEECCCCccc-cCcccch----hhHHHHHhc
Confidence 6888999999988 7887764 47899999999998 5787665 8999999999998 4676543 478899999
Q ss_pred CCcccccCCCCCCCCccCcCCCCCCCEEEeecCcCcccCChhhccCCCCCCEEEccCCCCcccCCCCCCCCceEEeecCC
Q 042825 177 NNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNNLLQGPTPRFNNSKLTVDMRTGS 256 (631)
Q Consensus 177 ~N~l~g~iP~~~~~~~~~~~~l~~L~~L~L~~N~l~g~iP~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~~~~~~l~~~~ 256 (631)
+|+|+ .+|..+ .++|+.|++++|.|+ .+|.. + .++|+.|+|++|+|+. +|.... .....|++++
T Consensus 313 ~N~Lt-~LP~~l---------~~sL~~L~Ls~N~Lt-~LP~~-l--~~sL~~L~Ls~N~L~~-LP~~lp-~~L~~LdLs~ 376 (754)
T PRK15370 313 SNSLT-ALPETL---------PPGLKTLEAGENALT-SLPAS-L--PPELQVLDVSKNQITV-LPETLP-PTITTLDVSR 376 (754)
T ss_pred CCccc-cCCccc---------cccceeccccCCccc-cCChh-h--cCcccEEECCCCCCCc-CChhhc-CCcCEEECCC
Confidence 99998 677654 268999999999999 58865 3 3789999999999985 443221 2344567799
Q ss_pred CcccCCCCC
Q 042825 257 NCFCLDDPG 265 (631)
Q Consensus 257 n~~~~~~~~ 265 (631)
|.+.. +|.
T Consensus 377 N~Lt~-LP~ 384 (754)
T PRK15370 377 NALTN-LPE 384 (754)
T ss_pred CcCCC-CCH
Confidence 99885 553
|
|
| >KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only] | Back alignment and domain information |
|---|
Probab=99.26 E-value=9.4e-13 Score=147.01 Aligned_cols=197 Identities=19% Similarity=0.259 Sum_probs=124.8
Q ss_pred cCCcccceeecCCCceEEEEEEecC-CcEEEEEEEecCCCCHHHHHHHHHHHHHHhcCChhHHhHhhh---hcCCCCCCH
Q 042825 417 TNNFSEENRLGRGGVGTVYKGELKD-GTEVGVKRMELGSVTEQGIAQFESEITVLTKGTLGRHLFNWE---EEGLEPLEW 492 (631)
Q Consensus 417 t~~f~~~~~iG~G~fg~Vyk~~~~~-g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~gsL~~~L~~~~---~~~~~~L~~ 492 (631)
-++|+.+++|..|+||.||.++++. .+.+|. ++.++..--+....|..-..+. |+-...+.... .+....+.|
T Consensus 82 e~df~~IklisngAygavylvrh~~trqrfa~-kiNkq~lilRnilt~a~npfvv--gDc~tllk~~g~lPvdmvla~Ey 158 (1205)
T KOG0606|consen 82 ESDFNTIKLISNGAYGAVYLVRHKETRQRFAM-KINKQNLILRNILTFAGNPFVV--GDCATLLKNIGPLPVDMVLAVEY 158 (1205)
T ss_pred ccccceeEeeccCCCCceeeeeccccccchhh-cccccchhhhccccccCCccee--chhhhhcccCCCCcchhhHHhHh
Confidence 3578899999999999999999874 678888 4443322111101110000000 22222221100 001123455
Q ss_pred HHHHHHHHHhhcC--------CCcEEEeeccccccCCC-------C-----cc-ccccccccCcccccccccccCCCCch
Q 042825 493 NTRLNIALDVARG--------DDMRVADFGLVRLVPEN-------G-----KH-SILTKVAGTFGYLAPEYIVTGRITAK 551 (631)
Q Consensus 493 ~~~~~I~~~ia~g--------~~~kl~DFGla~~~~~~-------~-----~~-~~~~~~~gt~~Y~aPE~~~~~~~~~k 551 (631)
.+++.|.+...+- +++|++|||+.+..-.. + .. .....++||+.|+|||++....|...
T Consensus 159 lh~ygivhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkp 238 (1205)
T KOG0606|consen 159 LHSYGIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLATNLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKP 238 (1205)
T ss_pred hccCCeecCCCCCCcceeeecccccccchhhhhhhhhhccchhhhcchHHHHHHhhhccccCCccccChhhhhhhccCCC
Confidence 5555554433332 67899999998753100 0 00 11234699999999999999999999
Q ss_pred hhHHHHHHHHHHHHcCCCCCCCCCCChHHHH---HHHHHhHhhhcCChhHHHHHHhhcCCChhhHHhH
Q 042825 552 VDVYSFGMILMDLITGRKVVDATHSDPEYII---HLATWFQKMHKNHDTFQMAIDKTIQLDEENLANV 616 (631)
Q Consensus 552 ~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~---~l~~~~~~~~~~~~~l~~~id~~L~~d~~~r~~~ 616 (631)
+|+|++|+++||.+.|+.||++...++.... +...|.........+.++++++.|+.+|..|.--
T Consensus 239 vdwwamGiIlyeFLVgcvpffGdtpeelfg~visd~i~wpE~dea~p~Ea~dli~~LL~qnp~~Rlgt 306 (1205)
T KOG0606|consen 239 VDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIEWPEEDEALPPEAQDLIEQLLRQNPLCRLGT 306 (1205)
T ss_pred ccHHHHHHHHHHHheeeeeccCCCHHHHHhhhhhhhccccccCcCCCHHHHHHHHHHHHhChHhhccc
Confidence 9999999999999999999998755443222 2345666655556789999999999888877543
|
|
| >PLN00181 protein SPA1-RELATED; Provisional | Back alignment and domain information |
|---|
Probab=99.24 E-value=1.5e-11 Score=143.95 Aligned_cols=88 Identities=14% Similarity=0.107 Sum_probs=64.6
Q ss_pred cccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHh--HhhhcCChhHHHHHHhhcCC
Q 042825 531 VAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWF--QKMHKNHDTFQMAIDKTIQL 608 (631)
Q Consensus 531 ~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~--~~~~~~~~~l~~~id~~L~~ 608 (631)
..||+.|||||++.+..|+.++|||||||+||||++|..|+..... ....+.... ........+..+++..+|..
T Consensus 175 ~~gt~~Y~APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~ 251 (793)
T PLN00181 175 AMEMSWYTSPEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKSR---TMSSLRHRVLPPQILLNWPKEASFCLWLLHP 251 (793)
T ss_pred cCCCcceEChhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHHH---HHHHHHHhhcChhhhhcCHHHHHHHHHhCCC
Confidence 4689999999999999999999999999999999999988753211 111111111 11111234567788889999
Q ss_pred ChhhHHhHHHHHH
Q 042825 609 DEENLANVSTVAE 621 (631)
Q Consensus 609 d~~~r~~~~~vl~ 621 (631)
+|.+|+++.++++
T Consensus 252 ~P~~Rps~~eil~ 264 (793)
T PLN00181 252 EPSCRPSMSELLQ 264 (793)
T ss_pred ChhhCcChHHHhh
Confidence 9999999999875
|
|
| >KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.22 E-value=4.6e-12 Score=121.45 Aligned_cols=196 Identities=17% Similarity=0.207 Sum_probs=130.3
Q ss_pred ceeecCCCceEEEEEEecCCcEEEEEEEecCCCCHHHHHHHHHHHHHHh----------------------------cCC
Q 042825 423 ENRLGRGGVGTVYKGELKDGTEVGVKRMELGSVTEQGIAQFESEITVLT----------------------------KGT 474 (631)
Q Consensus 423 ~~~iG~G~fg~Vyk~~~~~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~----------------------------~gs 474 (631)
..+|.+...|+.|+|+++ |..+++|++.....+.+..++|..|.-.+. .|+
T Consensus 195 ~tkl~e~hsgelwrgrwq-gndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsppnlv~isq~mp~gs 273 (448)
T KOG0195|consen 195 ITKLAESHSGELWRGRWQ-GNDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLVIISQYMPFGS 273 (448)
T ss_pred hhhhccCCCccccccccc-CcchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCCCceEeeeeccchH
Confidence 346778889999999997 556777888776666666677887753332 188
Q ss_pred hhHHhHhhhhcCCCCCCHHHHHHHHHHhhcCCCc-----------------EEEeecc-ccccCCCCcc-ccccccccCc
Q 042825 475 LGRHLFNWEEEGLEPLEWNTRLNIALDVARGDDM-----------------RVADFGL-VRLVPENGKH-SILTKVAGTF 535 (631)
Q Consensus 475 L~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g~~~-----------------kl~DFGl-a~~~~~~~~~-~~~~~~~gt~ 535 (631)
|+..||+ +....++..+..++++++|+|+.+ .+.|-.+ ||.-..+.+. .......-.+
T Consensus 274 lynvlhe---~t~vvvd~sqav~faldiargmaflhslep~ipr~~lns~hvmidedltarismad~kfsfqe~gr~y~p 350 (448)
T KOG0195|consen 274 LYNVLHE---QTSVVVDHSQAVRFALDIARGMAFLHSLEPMIPRFYLNSKHVMIDEDLTARISMADTKFSFQEVGRAYSP 350 (448)
T ss_pred HHHHHhc---CccEEEecchHHHHHHHHHhhHHHHhhcchhhhhhhcccceEEecchhhhheecccceeeeeccccccCc
Confidence 8888874 334456778889999999999211 1333332 2221111111 1112334578
Q ss_pred ccccccccccCCCC---chhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHhH--hhhcCChhHHHHHHhhcCCCh
Q 042825 536 GYLAPEYIVTGRIT---AKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQ--KMHKNHDTFQMAIDKTIQLDE 610 (631)
Q Consensus 536 ~Y~aPE~~~~~~~~---~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~~--~~~~~~~~l~~~id~~L~~d~ 610 (631)
.||+||.+..++-+ .++|+|||.|++||+.|++.||.+....+.....-.+-.+ .....+..+.+++.-|+..||
T Consensus 351 awmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecgmkialeglrv~ippgis~hm~klm~icmnedp 430 (448)
T KOG0195|consen 351 AWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECGMKIALEGLRVHIPPGISRHMNKLMNICMNEDP 430 (448)
T ss_pred ccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhhhhhhhccccccCCCCccHHHHHHHHHHhcCCC
Confidence 99999999876543 4799999999999999999999876555433222111111 112234677889999999999
Q ss_pred hhHHhHHHHHHH
Q 042825 611 ENLANVSTVAEL 622 (631)
Q Consensus 611 ~~r~~~~~vl~l 622 (631)
..||....++-+
T Consensus 431 gkrpkfdmivpi 442 (448)
T KOG0195|consen 431 GKRPKFDMIVPI 442 (448)
T ss_pred CcCCCcceehhh
Confidence 999987766544
|
|
| >KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=99.19 E-value=1.1e-11 Score=130.02 Aligned_cols=107 Identities=20% Similarity=0.327 Sum_probs=73.8
Q ss_pred CcEEEeeccccccCCCC----ccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChHHH
Q 042825 507 DMRVADFGLVRLVPENG----KHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT-GRKVVDATHSDPEYI 581 (631)
Q Consensus 507 ~~kl~DFGla~~~~~~~----~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~Ellt-G~~P~~~~~~~~~~~ 581 (631)
.+||.|||+...+.... .....+..+||..||+||.+.+..|+.|+||||+|++|+|+++ =..+++ .....
T Consensus 394 q~kIgDFgl~ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~~f~T~~e----r~~t~ 469 (516)
T KOG1033|consen 394 QLKIGDFGLVTSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLIQFSTQFE----RIATL 469 (516)
T ss_pred hhhhhhhhheeecccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHHHhccHHH----HHHhh
Confidence 46899999987764332 1223466789999999999999999999999999999999997 333332 11111
Q ss_pred HHHHH--HhHhhhcCChhHHHHHHhhcCCChhhHHhHH
Q 042825 582 IHLAT--WFQKMHKNHDTFQMAIDKTIQLDEENLANVS 617 (631)
Q Consensus 582 ~~l~~--~~~~~~~~~~~l~~~id~~L~~d~~~r~~~~ 617 (631)
..+.+ |.+..+.+.++-..++..++...|.+||.+.
T Consensus 470 ~d~r~g~ip~~~~~d~p~e~~ll~~lls~~p~~RP~~~ 507 (516)
T KOG1033|consen 470 TDIRDGIIPPEFLQDYPEEYTLLQQLLSPSPEERPSAI 507 (516)
T ss_pred hhhhcCCCChHHhhcCcHHHHHHHHhcCCCcccCchHH
Confidence 12221 2222333334446899999999999999443
|
|
| >PLN03150 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.19 E-value=1.8e-11 Score=138.19 Aligned_cols=92 Identities=29% Similarity=0.497 Sum_probs=84.7
Q ss_pred ccccccccccceecCCCCCCcCCCCCCcEEEccCCcccccCCCCCCCCccCcCCCCCCCEEEeecCcCcccCChhhccCC
Q 042825 144 LEFFSAYEANISGTIPDFIGTDTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNH 223 (631)
Q Consensus 144 L~~L~l~~n~l~g~ip~~~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~~~~~~~~l~~L~~L~L~~N~l~g~iP~~~~~~l 223 (631)
++.|+|++|+++|.+|..++ .+++|+.|+|++|+|+|.+|..+ +++++|+.|+|++|+|+|.+|.. ++.+
T Consensus 420 v~~L~L~~n~L~g~ip~~i~--~L~~L~~L~Ls~N~l~g~iP~~~-------~~l~~L~~LdLs~N~lsg~iP~~-l~~L 489 (623)
T PLN03150 420 IDGLGLDNQGLRGFIPNDIS--KLRHLQSINLSGNSIRGNIPPSL-------GSITSLEVLDLSYNSFNGSIPES-LGQL 489 (623)
T ss_pred EEEEECCCCCccccCCHHHh--CCCCCCEEECCCCcccCcCChHH-------hCCCCCCEEECCCCCCCCCCchH-HhcC
Confidence 67899999999999999998 89999999999999999999775 48999999999999999999976 8999
Q ss_pred CCCCEEEccCCCCcccCCCCCC
Q 042825 224 PKLTTLNLTNNLLQGPTPRFNN 245 (631)
Q Consensus 224 ~~L~~L~ls~N~l~g~~p~~~~ 245 (631)
++|+.|+|++|+|+|.+|....
T Consensus 490 ~~L~~L~Ls~N~l~g~iP~~l~ 511 (623)
T PLN03150 490 TSLRILNLNGNSLSGRVPAALG 511 (623)
T ss_pred CCCCEEECcCCcccccCChHHh
Confidence 9999999999999999997543
|
|
| >KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=99.18 E-value=6.3e-12 Score=127.93 Aligned_cols=158 Identities=25% Similarity=0.318 Sum_probs=99.6
Q ss_pred HhhcCCcccceeecCCCceEEEEEEec----CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc--CC-----h-------
Q 042825 414 RNATNNFSEENRLGRGGVGTVYKGELK----DGTEVGVKRMELGSVTEQGIAQFESEITVLTK--GT-----L------- 475 (631)
Q Consensus 414 ~~~t~~f~~~~~iG~G~fg~Vyk~~~~----~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~--gs-----L------- 475 (631)
....+.|...++||+|.|++||++.+. ..+.||+|.+..... -.+..+|+++|.. |. +
T Consensus 32 p~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts~----p~ri~~El~~L~~~gG~~ni~~~~~~~rnn 107 (418)
T KOG1167|consen 32 PFISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTSS----PSRILNELEMLYRLGGSDNIIKLNGCFRNN 107 (418)
T ss_pred hhhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeecccccC----chHHHHHHHHHHHhccchhhhcchhhhccC
Confidence 344567889999999999999999854 367899999976543 2457788888765 00 0
Q ss_pred ---------------hHHh--------HhhhhcCCCCCCHHHHHHHHHHhhcC---------CCcEEEeeccccccC---
Q 042825 476 ---------------GRHL--------FNWEEEGLEPLEWNTRLNIALDVARG---------DDMRVADFGLVRLVP--- 520 (631)
Q Consensus 476 ---------------~~~L--------~~~~~~~~~~L~~~~~~~I~~~ia~g---------~~~kl~DFGla~~~~--- 520 (631)
.+++ ..|.......+...|...|++..++- ....|.|||+|....
T Consensus 108 d~v~ivlp~~~H~~f~~l~~~l~~~~i~~Yl~~ll~Al~~~h~~GIvHRDiKpsNFL~n~~t~rg~LvDFgLA~~~d~~~ 187 (418)
T KOG1167|consen 108 DQVAIVLPYFEHDRFRDLYRSLSLAEIRWYLRNLLKALAHLHKNGIVHRDIKPSNFLYNRRTQRGVLVDFGLAQRYDGYQ 187 (418)
T ss_pred CeeEEEecccCccCHHHHHhcCCHHHHHHHHHHHHHHhhhhhccCccccCCCccccccccccCCceEEechhHHHHHhhh
Confidence 0000 00111111223333333333333332 223499999996210
Q ss_pred --------------C-CCc------------------------cccccccccCccccccccccc-CCCCchhhHHHHHHH
Q 042825 521 --------------E-NGK------------------------HSILTKVAGTFGYLAPEYIVT-GRITAKVDVYSFGMI 560 (631)
Q Consensus 521 --------------~-~~~------------------------~~~~~~~~gt~~Y~aPE~~~~-~~~~~k~DVwS~Gvv 560 (631)
+ .+. ........||+||.|||++.. ..-++++||||-||+
T Consensus 188 ~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~QttaiDiws~GVI 267 (418)
T KOG1167|consen 188 QTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAIDIWSAGVI 267 (418)
T ss_pred hhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCccceeeccce
Confidence 0 000 001122469999999999865 457889999999999
Q ss_pred HHHHHcCCCCCCCCC
Q 042825 561 LMDLITGRKVVDATH 575 (631)
Q Consensus 561 L~ElltG~~P~~~~~ 575 (631)
++-+++++.||-...
T Consensus 268 ~Lslls~~~PFf~a~ 282 (418)
T KOG1167|consen 268 LLSLLSRRYPFFKAK 282 (418)
T ss_pred eehhhccccccccCc
Confidence 999999999996443
|
|
| >PLN03210 Resistant to P | Back alignment and domain information |
|---|
Probab=99.17 E-value=2e-10 Score=138.90 Aligned_cols=155 Identities=17% Similarity=0.192 Sum_probs=101.6
Q ss_pred CCeEEEEeCCCCCcccCcchhcCCccCceeecccCcccCCCCcCc--ccccccccccccceecCCCCCCcCCCCCCcEEE
Q 042825 97 GQVTNIELQDQNRKGTVPPILKKLSSMAVMYLENNQLRGPIPSLV--GSLEFFSAYEANISGTIPDFIGTDTFPQLSYLD 174 (631)
Q Consensus 97 ~~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~L~~N~l~g~lP~~~--~~L~~L~l~~n~l~g~ip~~~~~~~l~~L~~L~ 174 (631)
.+++.|+|++|.....+|..+++|++|+.|++++|..-+.+|..+ .+|+.|++++|...+.+|.. .++|+.|+
T Consensus 657 ~~Le~L~L~~c~~L~~lp~si~~L~~L~~L~L~~c~~L~~Lp~~i~l~sL~~L~Lsgc~~L~~~p~~-----~~nL~~L~ 731 (1153)
T PLN03210 657 TNLETLKLSDCSSLVELPSSIQYLNKLEDLDMSRCENLEILPTGINLKSLYRLNLSGCSRLKSFPDI-----STNISWLD 731 (1153)
T ss_pred CcccEEEecCCCCccccchhhhccCCCCEEeCCCCCCcCccCCcCCCCCCCEEeCCCCCCccccccc-----cCCcCeee
Confidence 467888888877667788888888888888888765445677654 37778888777665566642 34677777
Q ss_pred ccCCcccccCCCCCCCC----------------------cc-CcCCCCCCCEEEeecCcCcccCChhhccCCCCCCEEEc
Q 042825 175 LGNNNLQGTIPSSFGMP----------------------FA-DISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNL 231 (631)
Q Consensus 175 Ls~N~l~g~iP~~~~~~----------------------~~-~~~~l~~L~~L~L~~N~l~g~iP~~~~~~l~~L~~L~l 231 (631)
|++|.+. .+|..+... .+ ....+++|+.|+|++|...+.+|.+ ++++++|+.|++
T Consensus 732 L~~n~i~-~lP~~~~l~~L~~L~l~~~~~~~l~~~~~~l~~~~~~~~~sL~~L~Ls~n~~l~~lP~s-i~~L~~L~~L~L 809 (1153)
T PLN03210 732 LDETAIE-EFPSNLRLENLDELILCEMKSEKLWERVQPLTPLMTMLSPSLTRLFLSDIPSLVELPSS-IQNLHKLEHLEI 809 (1153)
T ss_pred cCCCccc-cccccccccccccccccccchhhccccccccchhhhhccccchheeCCCCCCccccChh-hhCCCCCCEEEC
Confidence 7777776 666543200 00 0112357788888888777778865 778888888888
Q ss_pred cCCCCcccCCCCCCCCceEEeecCCCc
Q 042825 232 TNNLLQGPTPRFNNSKLTVDMRTGSNC 258 (631)
Q Consensus 232 s~N~l~g~~p~~~~~~~~~~l~~~~n~ 258 (631)
++|..-+.+|..........+++++|.
T Consensus 810 s~C~~L~~LP~~~~L~sL~~L~Ls~c~ 836 (1153)
T PLN03210 810 ENCINLETLPTGINLESLESLDLSGCS 836 (1153)
T ss_pred CCCCCcCeeCCCCCccccCEEECCCCC
Confidence 877655556654333333445555543
|
syringae 6; Provisional |
| >KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.14 E-value=2.8e-12 Score=141.28 Aligned_cols=147 Identities=26% Similarity=0.387 Sum_probs=99.5
Q ss_pred CeEEEEeCCCCCcccCcchhc--------------------------CCccCceeecccCcccC-CCCcCc--ccccccc
Q 042825 98 QVTNIELQDQNRKGTVPPILK--------------------------KLSSMAVMYLENNQLRG-PIPSLV--GSLEFFS 148 (631)
Q Consensus 98 ~l~~l~l~~n~l~g~ip~~~~--------------------------~l~~L~~L~L~~N~l~g-~lP~~~--~~L~~L~ 148 (631)
.+.+|+|..|+|. .+|+.+. .+..|+.|+|.+|+|+. .+|... .+|+.|+
T Consensus 311 sL~tLdL~~N~L~-~lp~~~l~v~~~~l~~ln~s~n~l~~lp~~~e~~~~~Lq~LylanN~Ltd~c~p~l~~~~hLKVLh 389 (1081)
T KOG0618|consen 311 SLRTLDLQSNNLP-SLPDNFLAVLNASLNTLNVSSNKLSTLPSYEENNHAALQELYLANNHLTDSCFPVLVNFKHLKVLH 389 (1081)
T ss_pred eeeeeeehhcccc-ccchHHHhhhhHHHHHHhhhhccccccccccchhhHHHHHHHHhcCcccccchhhhccccceeeee
Confidence 4788888888876 3443211 13345666777777765 334322 2788888
Q ss_pred cccccceecCCCCCCcCCCCCCcEEEccCCcccccCCCCCCCCccCcCCCCCCCEEEeecCcCcccCChhhccCCCCCCE
Q 042825 149 AYEANISGTIPDFIGTDTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTT 228 (631)
Q Consensus 149 l~~n~l~g~ip~~~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~~~~~~~~l~~L~~L~L~~N~l~g~iP~~~~~~l~~L~~ 228 (631)
|++|++. .+|++.- .+++.|+.|+||+|+|+ .||.++ .+++.|++|...+|+|. .+| . +..++.|+.
T Consensus 390 LsyNrL~-~fpas~~-~kle~LeeL~LSGNkL~-~Lp~tv-------a~~~~L~tL~ahsN~l~-~fP-e-~~~l~qL~~ 456 (1081)
T KOG0618|consen 390 LSYNRLN-SFPASKL-RKLEELEELNLSGNKLT-TLPDTV-------ANLGRLHTLRAHSNQLL-SFP-E-LAQLPQLKV 456 (1081)
T ss_pred ecccccc-cCCHHHH-hchHHhHHHhcccchhh-hhhHHH-------HhhhhhHHHhhcCCcee-ech-h-hhhcCcceE
Confidence 8888876 5676543 26777888888888888 777653 47888888888888888 778 3 778888888
Q ss_pred EEccCCCCcc-cCCCCCCCCceEEeecCCCc
Q 042825 229 LNLTNNLLQG-PTPRFNNSKLTVDMRTGSNC 258 (631)
Q Consensus 229 L~ls~N~l~g-~~p~~~~~~~~~~l~~~~n~ 258 (631)
+|+|.|+|+- .+|.......+.++++++|.
T Consensus 457 lDlS~N~L~~~~l~~~~p~p~LkyLdlSGN~ 487 (1081)
T KOG0618|consen 457 LDLSCNNLSEVTLPEALPSPNLKYLDLSGNT 487 (1081)
T ss_pred EecccchhhhhhhhhhCCCcccceeeccCCc
Confidence 8888888875 45544332345566677775
|
|
| >PLN03210 Resistant to P | Back alignment and domain information |
|---|
Probab=99.07 E-value=6.6e-10 Score=134.54 Aligned_cols=226 Identities=18% Similarity=0.226 Sum_probs=143.2
Q ss_pred cCCCCCCceecccceeehhhhcc---ccchhhhhhhhhhhccccccccccCCCCCCCChhhHHHHHHHHHhCCCCCCCCC
Q 042825 4 IPWHPSNFQLFGFPRLTFRDCMT---ATSELEREKTERVQGDRRKKRRKIPSASSNQSRPDAAVMQDLKASFVIPKRLKW 80 (631)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~k~~~~~~~~~~w 80 (631)
+..+|++|+.-+|..|.+.++.. ......+++|+.|+++++..-..+|. .+.... |..+.-
T Consensus 601 l~~lP~~f~~~~L~~L~L~~s~l~~L~~~~~~l~~Lk~L~Ls~~~~l~~ip~-ls~l~~-----Le~L~L---------- 664 (1153)
T PLN03210 601 LRCMPSNFRPENLVKLQMQGSKLEKLWDGVHSLTGLRNIDLRGSKNLKEIPD-LSMATN-----LETLKL---------- 664 (1153)
T ss_pred CCCCCCcCCccCCcEEECcCccccccccccccCCCCCEEECCCCCCcCcCCc-cccCCc-----ccEEEe----------
Confidence 45689999888888888877643 22234678999999998765556663 221111 111000
Q ss_pred CCCCCCC-cccee--eCCCCCeEEEEeCCCCCcccCcchhcCCccCceeecccCcccCCCCcCcccccccccccccceec
Q 042825 81 SDPDPCQ-WSHVI--CSDDGQVTNIELQDQNRKGTVPPILKKLSSMAVMYLENNQLRGPIPSLVGSLEFFSAYEANISGT 157 (631)
Q Consensus 81 ~~~~~C~-w~gv~--C~~~~~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~L~~N~l~g~lP~~~~~L~~L~l~~n~l~g~ 157 (631)
. -|. ...+. -....+++.|+++++..-+.+|..+ ++++|+.|+|++|...+.+|....+|+.|++++|.+. .
T Consensus 665 ~---~c~~L~~lp~si~~L~~L~~L~L~~c~~L~~Lp~~i-~l~sL~~L~Lsgc~~L~~~p~~~~nL~~L~L~~n~i~-~ 739 (1153)
T PLN03210 665 S---DCSSLVELPSSIQYLNKLEDLDMSRCENLEILPTGI-NLKSLYRLNLSGCSRLKSFPDISTNISWLDLDETAIE-E 739 (1153)
T ss_pred c---CCCCccccchhhhccCCCCEEeCCCCCCcCccCCcC-CCCCCCEEeCCCCCCccccccccCCcCeeecCCCccc-c
Confidence 0 010 00000 0123467788888766556777665 6788888888887666677766667777777777765 4
Q ss_pred CCCCCCc----------------------------CCCCCCcEEEccCCcccccCCCCCCCCccCcCCCCCCCEEEeecC
Q 042825 158 IPDFIGT----------------------------DTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHN 209 (631)
Q Consensus 158 ip~~~~~----------------------------~~l~~L~~L~Ls~N~l~g~iP~~~~~~~~~~~~l~~L~~L~L~~N 209 (631)
+|..+.. ...++|+.|+|++|...+.+|.++ +++++|+.|+|++|
T Consensus 740 lP~~~~l~~L~~L~l~~~~~~~l~~~~~~l~~~~~~~~~sL~~L~Ls~n~~l~~lP~si-------~~L~~L~~L~Ls~C 812 (1153)
T PLN03210 740 FPSNLRLENLDELILCEMKSEKLWERVQPLTPLMTMLSPSLTRLFLSDIPSLVELPSSI-------QNLHKLEHLEIENC 812 (1153)
T ss_pred ccccccccccccccccccchhhccccccccchhhhhccccchheeCCCCCCccccChhh-------hCCCCCCEEECCCC
Confidence 5543210 012467778888887777788664 48899999999887
Q ss_pred cCcccCChhhccCCCCCCEEEccCCCCcccCCCCCCCCceEEeecCCCcccC
Q 042825 210 KLTGIFPVSSFNNHPKLTTLNLTNNLLQGPTPRFNNSKLTVDMRTGSNCFCL 261 (631)
Q Consensus 210 ~l~g~iP~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~~~~~~l~~~~n~~~~ 261 (631)
...+.+|.. . .+++|+.|+|++|..-..+|..... ...+++++|.+..
T Consensus 813 ~~L~~LP~~-~-~L~sL~~L~Ls~c~~L~~~p~~~~n--L~~L~Ls~n~i~~ 860 (1153)
T PLN03210 813 INLETLPTG-I-NLESLESLDLSGCSRLRTFPDISTN--ISDLNLSRTGIEE 860 (1153)
T ss_pred CCcCeeCCC-C-CccccCEEECCCCCccccccccccc--cCEeECCCCCCcc
Confidence 655588854 3 7888999999987765666654332 2345567777664
|
syringae 6; Provisional |
| >KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=99.06 E-value=1.2e-11 Score=129.89 Aligned_cols=127 Identities=28% Similarity=0.526 Sum_probs=68.2
Q ss_pred CeEEEEeCCCCCcccCcchhcCCccCceeecccCcccCCCCcCcc---cccccccccccceecCCCCCCcCCCCCCcEEE
Q 042825 98 QVTNIELQDQNRKGTVPPILKKLSSMAVMYLENNQLRGPIPSLVG---SLEFFSAYEANISGTIPDFIGTDTFPQLSYLD 174 (631)
Q Consensus 98 ~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~L~~N~l~g~lP~~~~---~L~~L~l~~n~l~g~ip~~~~~~~l~~L~~L~ 174 (631)
.++.|||+.|+++ .+|..++.|+ |++|.+++|+++ .+|..++ .|..|+.+.|++. .+|..++ .+.+|+.|+
T Consensus 122 ~lt~l~ls~NqlS-~lp~~lC~lp-Lkvli~sNNkl~-~lp~~ig~~~tl~~ld~s~nei~-slpsql~--~l~slr~l~ 195 (722)
T KOG0532|consen 122 ALTFLDLSSNQLS-HLPDGLCDLP-LKVLIVSNNKLT-SLPEEIGLLPTLAHLDVSKNEIQ-SLPSQLG--YLTSLRDLN 195 (722)
T ss_pred HHHHhhhccchhh-cCChhhhcCc-ceeEEEecCccc-cCCcccccchhHHHhhhhhhhhh-hchHHhh--hHHHHHHHH
Confidence 3444555555554 4455555443 455555555554 4444444 4444555555544 3444444 445555555
Q ss_pred ccCCcccccCCCCCCCCccCcCCCCCCCEEEeecCcCcccCChhhccCCCCCCEEEccCCCCcccCC
Q 042825 175 LGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNNLLQGPTP 241 (631)
Q Consensus 175 Ls~N~l~g~iP~~~~~~~~~~~~l~~L~~L~L~~N~l~g~iP~~~~~~l~~L~~L~ls~N~l~g~~p 241 (631)
+..|++. .+|+.+ ..| .|..||+|.|+++ .||.. |..|..|++|-|.+|.|..++-
T Consensus 196 vrRn~l~-~lp~El-------~~L-pLi~lDfScNkis-~iPv~-fr~m~~Lq~l~LenNPLqSPPA 251 (722)
T KOG0532|consen 196 VRRNHLE-DLPEEL-------CSL-PLIRLDFSCNKIS-YLPVD-FRKMRHLQVLQLENNPLQSPPA 251 (722)
T ss_pred Hhhhhhh-hCCHHH-------hCC-ceeeeecccCcee-ecchh-hhhhhhheeeeeccCCCCCChH
Confidence 5555555 444433 233 3666777777776 66654 6677777777777776665443
|
|
| >KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=99.04 E-value=6.9e-12 Score=131.53 Aligned_cols=154 Identities=23% Similarity=0.424 Sum_probs=125.9
Q ss_pred eEEEEeCCCCCcccCcchhcCCccCceeecccCcccCCCCcCcc--cccccccccccceecCCCCCCcCCCCCCcEEEcc
Q 042825 99 VTNIELQDQNRKGTVPPILKKLSSMAVMYLENNQLRGPIPSLVG--SLEFFSAYEANISGTIPDFIGTDTFPQLSYLDLG 176 (631)
Q Consensus 99 l~~l~l~~n~l~g~ip~~~~~l~~L~~L~L~~N~l~g~lP~~~~--~L~~L~l~~n~l~g~ip~~~~~~~l~~L~~L~Ls 176 (631)
|..+.|..|.+. .||+.+++|..|++|||+.|+++ .+|..+. -|+.|-+++|+++ .+|+.++ .+..|..||.+
T Consensus 100 Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~NqlS-~lp~~lC~lpLkvli~sNNkl~-~lp~~ig--~~~tl~~ld~s 174 (722)
T KOG0532|consen 100 LESLILYHNCIR-TIPEAICNLEALTFLDLSSNQLS-HLPDGLCDLPLKVLIVSNNKLT-SLPEEIG--LLPTLAHLDVS 174 (722)
T ss_pred HHHHHHHhccce-ecchhhhhhhHHHHhhhccchhh-cCChhhhcCcceeEEEecCccc-cCCcccc--cchhHHHhhhh
Confidence 556667777776 78999999999999999999998 7777665 6888999999987 7899998 78899999999
Q ss_pred CCcccccCCCCCCCCccCcCCCCCCCEEEeecCcCcccCChhhccCCCCCCEEEccCCCCcccCCCCCCCCceEEeecCC
Q 042825 177 NNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNNLLQGPTPRFNNSKLTVDMRTGS 256 (631)
Q Consensus 177 ~N~l~g~iP~~~~~~~~~~~~l~~L~~L~L~~N~l~g~iP~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~~~~~~l~~~~ 256 (631)
.|.+. ++|+.++ .+.+|+.|++..|++. .+|+. +..| .|..||+|+|+++-.+-.+-.+..+..+.+.+
T Consensus 175 ~nei~-slpsql~-------~l~slr~l~vrRn~l~-~lp~E-l~~L-pLi~lDfScNkis~iPv~fr~m~~Lq~l~Len 243 (722)
T KOG0532|consen 175 KNEIQ-SLPSQLG-------YLTSLRDLNVRRNHLE-DLPEE-LCSL-PLIRLDFSCNKISYLPVDFRKMRHLQVLQLEN 243 (722)
T ss_pred hhhhh-hchHHhh-------hHHHHHHHHHhhhhhh-hCCHH-HhCC-ceeeeecccCceeecchhhhhhhhheeeeecc
Confidence 99999 8887754 8999999999999999 78877 6655 59999999999987665666665566677899
Q ss_pred CcccCCCCCCccC
Q 042825 257 NCFCLDDPGLACD 269 (631)
Q Consensus 257 n~~~~~~~~~~~~ 269 (631)
|.+.. .|.+.|.
T Consensus 244 NPLqS-PPAqIC~ 255 (722)
T KOG0532|consen 244 NPLQS-PPAQICE 255 (722)
T ss_pred CCCCC-ChHHHHh
Confidence 99876 4555564
|
|
| >KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.04 E-value=2.4e-10 Score=115.29 Aligned_cols=68 Identities=22% Similarity=0.331 Sum_probs=49.8
Q ss_pred eeeCCC----------CCeEEEEeCCCCCcccCcchhcCCccCceeecccCcccCCCCcCcc---ccccccccc-cccee
Q 042825 91 VICSDD----------GQVTNIELQDQNRKGTVPPILKKLSSMAVMYLENNQLRGPIPSLVG---SLEFFSAYE-ANISG 156 (631)
Q Consensus 91 v~C~~~----------~~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~L~~N~l~g~lP~~~~---~L~~L~l~~-n~l~g 156 (631)
|.|+.. ...+.|+|..|+++..-|..|..+.+|+.|||++|+|+-.-|..|. +|..|-+.+ |+++
T Consensus 51 VdCr~~GL~eVP~~LP~~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~NkI~- 129 (498)
T KOG4237|consen 51 VDCRGKGLTEVPANLPPETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNKIT- 129 (498)
T ss_pred EEccCCCcccCcccCCCcceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCchh-
Confidence 788643 2678999999999954445799999999999999999976676654 444444444 6665
Q ss_pred cCC
Q 042825 157 TIP 159 (631)
Q Consensus 157 ~ip 159 (631)
.+|
T Consensus 130 ~l~ 132 (498)
T KOG4237|consen 130 DLP 132 (498)
T ss_pred hhh
Confidence 344
|
|
| >KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.04 E-value=4.1e-11 Score=132.30 Aligned_cols=138 Identities=27% Similarity=0.413 Sum_probs=114.1
Q ss_pred CCCeEEEEeCCCCCcccCcchhcCCccCceeecccCcccCCCCcCcc---cccccccccccceecCCCCCCcCCCCCCcE
Q 042825 96 DGQVTNIELQDQNRKGTVPPILKKLSSMAVMYLENNQLRGPIPSLVG---SLEFFSAYEANISGTIPDFIGTDTFPQLSY 172 (631)
Q Consensus 96 ~~~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~L~~N~l~g~lP~~~~---~L~~L~l~~n~l~g~ip~~~~~~~l~~L~~ 172 (631)
..+++.++++.|+++ .+|++++.+.+|..|...+|+|+ .+|..+. +|+.|.+..|.++ -+|+... .++.|++
T Consensus 240 p~nl~~~dis~n~l~-~lp~wi~~~~nle~l~~n~N~l~-~lp~ri~~~~~L~~l~~~~nel~-yip~~le--~~~sL~t 314 (1081)
T KOG0618|consen 240 PLNLQYLDISHNNLS-NLPEWIGACANLEALNANHNRLV-ALPLRISRITSLVSLSAAYNELE-YIPPFLE--GLKSLRT 314 (1081)
T ss_pred cccceeeecchhhhh-cchHHHHhcccceEecccchhHH-hhHHHHhhhhhHHHHHhhhhhhh-hCCCccc--ccceeee
Confidence 357888999999999 58899999999999999999996 7887655 7888999999988 5777776 6889999
Q ss_pred EEccCCcccccCCCCCCC-------------------------------------------CccCcCCCCCCCEEEeecC
Q 042825 173 LDLGNNNLQGTIPSSFGM-------------------------------------------PFADISNLSTLEDLSLGHN 209 (631)
Q Consensus 173 L~Ls~N~l~g~iP~~~~~-------------------------------------------~~~~~~~l~~L~~L~L~~N 209 (631)
|||..|+|. .+|+.+-+ .+|-+-+.+.|+.|+|++|
T Consensus 315 LdL~~N~L~-~lp~~~l~v~~~~l~~ln~s~n~l~~lp~~~e~~~~~Lq~LylanN~Ltd~c~p~l~~~~hLKVLhLsyN 393 (1081)
T KOG0618|consen 315 LDLQSNNLP-SLPDNFLAVLNASLNTLNVSSNKLSTLPSYEENNHAALQELYLANNHLTDSCFPVLVNFKHLKVLHLSYN 393 (1081)
T ss_pred eeehhcccc-ccchHHHhhhhHHHHHHhhhhccccccccccchhhHHHHHHHHhcCcccccchhhhccccceeeeeeccc
Confidence 999999998 77764310 2344667889999999999
Q ss_pred cCcccCChhhccCCCCCCEEEccCCCCcccC
Q 042825 210 KLTGIFPVSSFNNHPKLTTLNLTNNLLQGPT 240 (631)
Q Consensus 210 ~l~g~iP~~~~~~l~~L~~L~ls~N~l~g~~ 240 (631)
+|. ++|.+.+.++..|+.|+||+|+|+...
T Consensus 394 rL~-~fpas~~~kle~LeeL~LSGNkL~~Lp 423 (1081)
T KOG0618|consen 394 RLN-SFPASKLRKLEELEELNLSGNKLTTLP 423 (1081)
T ss_pred ccc-cCCHHHHhchHHhHHHhcccchhhhhh
Confidence 998 899888889999999999999987544
|
|
| >PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A | Back alignment and domain information |
|---|
Probab=98.98 E-value=8.2e-10 Score=111.01 Aligned_cols=185 Identities=19% Similarity=0.258 Sum_probs=109.7
Q ss_pred cccceeecCCCceEEEEEEecC-CcEEEEEEEecCCC-CHHHHHHHHHHHHHHhc-------------------------
Q 042825 420 FSEENRLGRGGVGTVYKGELKD-GTEVGVKRMELGSV-TEQGIAQFESEITVLTK------------------------- 472 (631)
Q Consensus 420 f~~~~~iG~G~fg~Vyk~~~~~-g~~vAvK~l~~~~~-~~~~~~~~~~Ei~~l~~------------------------- 472 (631)
+.....||.|+++.||.++..+ |+.+|||....... .....+++.+|.-....
T Consensus 14 l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~i 93 (288)
T PF14531_consen 14 LVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLRI 93 (288)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEEE
T ss_pred EEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEEE
Confidence 4567899999999999999774 89999998865432 23456677776533322
Q ss_pred -----------------------------CChhHHhHhhhh--cCCCCCCHHHHHHHHHHhhc------------C----
Q 042825 473 -----------------------------GTLGRHLFNWEE--EGLEPLEWNTRLNIALDVAR------------G---- 505 (631)
Q Consensus 473 -----------------------------gsL~~~L~~~~~--~~~~~L~~~~~~~I~~~ia~------------g---- 505 (631)
++|.+.+..... +....+....|+.+.+++.+ |
T Consensus 94 ~~~~~~~~~~~~~~~~~v~n~~~l~P~~~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~GlVHgdi~~ 173 (288)
T PF14531_consen 94 PGKPPFFERGPGQSIYWVLNRFLLMPRAQGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSYGLVHGDIKP 173 (288)
T ss_dssp TTS-SEEEECETTEEEEEESEEEEEE--SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEEEST-SG
T ss_pred cCCCcceecCCCCccceeehhhhccchhhhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhcceEecccce
Confidence 344433321111 11123444555555443321 2
Q ss_pred --------CCcEEEeeccccccCCCCccccccccccCcccccccccccC--------CCCchhhHHHHHHHHHHHHcCCC
Q 042825 506 --------DDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTG--------RITAKVDVYSFGMILMDLITGRK 569 (631)
Q Consensus 506 --------~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~--------~~~~k~DVwS~GvvL~ElltG~~ 569 (631)
+.+.++||+-..... ..... ...+..|.+||..... .++.+.|.|++|+++|.|.+|+.
T Consensus 174 ~nfll~~~G~v~Lg~F~~~~r~g---~~~~~--~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lWC~~l 248 (288)
T PF14531_consen 174 ENFLLDQDGGVFLGDFSSLVRAG---TRYRC--SEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLWCGRL 248 (288)
T ss_dssp GGEEE-TTS-EEE--GGGEEETT---EEEEG--GGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHHHSS-
T ss_pred eeEEEcCCCCEEEcChHHHeecC---ceeec--cCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHHHccC
Confidence 567899998876542 11111 3345789999987442 48999999999999999999999
Q ss_pred CCCCCCCChHHHHHHHHHhHhhhcCChhHHHHHHhhcCCChhhH
Q 042825 570 VVDATHSDPEYIIHLATWFQKMHKNHDTFQMAIDKTIQLDEENL 613 (631)
Q Consensus 570 P~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~id~~L~~d~~~r 613 (631)
||+........ ...|-... ..++.++++|..+|+.+|.+|
T Consensus 249 Pf~~~~~~~~~---~~~f~~C~-~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 249 PFGLSSPEADP---EWDFSRCR-DMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp STCCCGGGSTS---GGGGTTSS----HHHHHHHHHHT-SSGGGS
T ss_pred CCCCCCccccc---cccchhcC-CcCHHHHHHHHHHccCCcccC
Confidence 99854321100 00222222 456789999999999998875
|
|
| >KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.97 E-value=6.8e-11 Score=126.39 Aligned_cols=99 Identities=21% Similarity=0.316 Sum_probs=70.9
Q ss_pred CCcEEEeeccccccCCCCccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHH
Q 042825 506 DDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLA 585 (631)
Q Consensus 506 ~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~ 585 (631)
+++++.|||+++..-+.. ..+||.-|||||++. .+...+|.||||++++||+||..||.. +.....+.
T Consensus 134 Ghi~~tdfglske~v~~~------~~cgt~eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~----~~~~~Il~ 201 (612)
T KOG0603|consen 134 GHIKLTDFGLSKEAVKEK------IACGTYEYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGG----DTMKRILK 201 (612)
T ss_pred CccccCCchhhhHhHhhh------hcccchhhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCch----HHHHHHhh
Confidence 678999999998764221 128999999999987 678899999999999999999999985 11111122
Q ss_pred HHhHhhhcCChhHHHHHHhhcCCChhhHHhH
Q 042825 586 TWFQKMHKNHDTFQMAIDKTIQLDEENLANV 616 (631)
Q Consensus 586 ~~~~~~~~~~~~l~~~id~~L~~d~~~r~~~ 616 (631)
.............+++++.+...+|..|...
T Consensus 202 ~~~~~p~~l~~~a~~~~~~l~~r~p~nrLg~ 232 (612)
T KOG0603|consen 202 AELEMPRELSAEARSLFRQLFKRNPENRLGA 232 (612)
T ss_pred hccCCchhhhHHHHHHHHHHHhhCHHHHhcc
Confidence 1211111223567888998888888877554
|
|
| >COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Probab=98.91 E-value=3.3e-08 Score=101.61 Aligned_cols=195 Identities=23% Similarity=0.360 Sum_probs=127.0
Q ss_pred cccceeecCCCceEEEEEEecCCcEEEEEEEecCCCCHH-HHHHHHHHHHHHhc--------------------------
Q 042825 420 FSEENRLGRGGVGTVYKGELKDGTEVGVKRMELGSVTEQ-GIAQFESEITVLTK-------------------------- 472 (631)
Q Consensus 420 f~~~~~iG~G~fg~Vyk~~~~~g~~vAvK~l~~~~~~~~-~~~~~~~Ei~~l~~-------------------------- 472 (631)
|.....||.|+||.||++... ..+|+|.+........ ....|.+|+.++..
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~--~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 79 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR--KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVMEY 79 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec--cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEec
Confidence 566788999999999999976 8899999876543332 46778888876654
Q ss_pred ---CChhHHhHhhhhcCC--CCCCHHHHHHHHHHhhcC------------------------C-CcEEEeeccccccCCC
Q 042825 473 ---GTLGRHLFNWEEEGL--EPLEWNTRLNIALDVARG------------------------D-DMRVADFGLVRLVPEN 522 (631)
Q Consensus 473 ---gsL~~~L~~~~~~~~--~~L~~~~~~~I~~~ia~g------------------------~-~~kl~DFGla~~~~~~ 522 (631)
+++.+++. ... ..+.......+..+++.+ . .++++|||.++.....
T Consensus 80 ~~~~~l~~~~~----~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~ 155 (384)
T COG0515 80 VDGGSLEDLLK----KIGRKGPLSESEALFILAQILSALEYLHSKGIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDP 155 (384)
T ss_pred CCCCcHHHHHH----hcccccCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeecCCCCeEEEeccCcceecCCC
Confidence 22221111 111 134444444444444432 2 4789999999866432
Q ss_pred Cccc----cccccccCccccccccccc---CCCCchhhHHHHHHHHHHHHcCCCCCCCCCC---ChHHHHHHHHHhHh--
Q 042825 523 GKHS----ILTKVAGTFGYLAPEYIVT---GRITAKVDVYSFGMILMDLITGRKVVDATHS---DPEYIIHLATWFQK-- 590 (631)
Q Consensus 523 ~~~~----~~~~~~gt~~Y~aPE~~~~---~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~---~~~~~~~l~~~~~~-- 590 (631)
.... ......||..|+|||.+.. ..+....|+||+|++++++++|+.||..... .......+..-...
T Consensus 156 ~~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (384)
T COG0515 156 GSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTPSL 235 (384)
T ss_pred CccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHHHHhcCCccc
Confidence 2211 2456789999999999987 5788999999999999999999999876543 11111111111111
Q ss_pred --hhcCC------hhHHHHHHhhcCCChhhHHhHHHHH
Q 042825 591 --MHKNH------DTFQMAIDKTIQLDEENLANVSTVA 620 (631)
Q Consensus 591 --~~~~~------~~l~~~id~~L~~d~~~r~~~~~vl 620 (631)
..... ..+.+++.+++..+|..|.+.....
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 273 (384)
T COG0515 236 ASPLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDL 273 (384)
T ss_pred ccccCccccchhhHHHHHHHHHHHhcCchhcCCHHHHh
Confidence 01111 2578899999888888887766544
|
|
| >KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.91 E-value=3.5e-08 Score=103.09 Aligned_cols=152 Identities=22% Similarity=0.250 Sum_probs=101.1
Q ss_pred CcccceeecCCCceEEEEEEecCC--cEEEEEEEecCCCCHHHHHHHHHHHHHHhc----------------C-------
Q 042825 419 NFSEENRLGRGGVGTVYKGELKDG--TEVGVKRMELGSVTEQGIAQFESEITVLTK----------------G------- 473 (631)
Q Consensus 419 ~f~~~~~iG~G~fg~Vyk~~~~~g--~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~----------------g------- 473 (631)
.|...+.||+|+||.||+|..... ..+|+|......... . ..+..|+.++.. |
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~-~-~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~ 96 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSK-P-SVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFN 96 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCC-C-ccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCcee
Confidence 799999999999999999996543 478888776532111 1 134444444432 1
Q ss_pred ---------ChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC-----------------------------CCcEEEeecc
Q 042825 474 ---------TLGRHLFNWEEEGLEPLEWNTRLNIALDVARG-----------------------------DDMRVADFGL 515 (631)
Q Consensus 474 ---------sL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g-----------------------------~~~kl~DFGl 515 (631)
+|.+.... .....++-.+.++|++++..+ ..+.+.|||+
T Consensus 97 ~iVM~l~G~sL~dl~~~---~~~~~fs~~T~l~ia~q~l~~l~~lH~~G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGl 173 (322)
T KOG1164|consen 97 FIVMSLLGPSLEDLRKR---NPPGRFSRKTVLRIAIQNLNALEDLHSKGFIHRDIKPENFVVGQSSRSEVRTLYLLDFGL 173 (322)
T ss_pred EEEEeccCccHHHHHHh---CCCCCcCHhHHHHHHHHHHHHHHHHHhcCcccCCcCHHHeeecCCCCcccceEEEEecCC
Confidence 12221111 112456666666777665433 1256999999
Q ss_pred cc--ccCCCCcc---c--c-ccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCC
Q 042825 516 VR--LVPENGKH---S--I-LTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATH 575 (631)
Q Consensus 516 a~--~~~~~~~~---~--~-~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~ 575 (631)
++ ........ . . .....||..|.++....+...+.+.|+||++.++.|+..|..||....
T Consensus 174 ar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~ 241 (322)
T KOG1164|consen 174 ARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALE 241 (322)
T ss_pred CccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCcccc
Confidence 98 32111110 0 1 234569999999999999999999999999999999999999997654
|
|
| >PRK09188 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=98.88 E-value=1.7e-09 Score=113.36 Aligned_cols=131 Identities=21% Similarity=0.171 Sum_probs=79.2
Q ss_pred hhcCCcccceeecCCCceEEEEEEec--CCcEEEEEEEecCCC---CHHHHHHHHHHHHHHhc-----------------
Q 042825 415 NATNNFSEENRLGRGGVGTVYKGELK--DGTEVGVKRMELGSV---TEQGIAQFESEITVLTK----------------- 472 (631)
Q Consensus 415 ~~t~~f~~~~~iG~G~fg~Vyk~~~~--~g~~vAvK~l~~~~~---~~~~~~~~~~Ei~~l~~----------------- 472 (631)
...++|...+.||+|+||+||+|+++ +++.||||++..... .....+.|.+|++++.+
T Consensus 15 ~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~~~~~ 94 (365)
T PRK09188 15 ALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLATGKDG 94 (365)
T ss_pred cccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEcCCcE
Confidence 45568999999999999999999865 477889998753311 23345679999999876
Q ss_pred --------CChhHHh----HhhhhcCCCCCCHHHHHHHHHHhh-cC--------CCcEEEeeccccccCCCCccc-----
Q 042825 473 --------GTLGRHL----FNWEEEGLEPLEWNTRLNIALDVA-RG--------DDMRVADFGLVRLVPENGKHS----- 526 (631)
Q Consensus 473 --------gsL~~~L----~~~~~~~~~~L~~~~~~~I~~~ia-~g--------~~~kl~DFGla~~~~~~~~~~----- 526 (631)
++|.... ..+..+....+...|...|+++.. +- +.+||+|||+|+.+.......
T Consensus 95 LVmE~~~G~~L~~~~~~~~~~~~~~i~~aL~~lH~~gIiHrDL~KP~NILv~~~~~ikLiDFGlA~~~~~~~~~~~~~~~ 174 (365)
T PRK09188 95 LVRGWTEGVPLHLARPHGDPAWFRSAHRALRDLHRAGITHNDLAKPQNWLMGPDGEAAVIDFQLASVFRRRGALYRIAAY 174 (365)
T ss_pred EEEEccCCCCHHHhCccchHHHHHHHHHHHHHHHHCCCeeCCCCCcceEEEcCCCCEEEEECccceecccCcchhhhhhh
Confidence 1121000 000000011122222222322222 11 457899999999775332211
Q ss_pred -cccccccCccccccccccc
Q 042825 527 -ILTKVAGTFGYLAPEYIVT 545 (631)
Q Consensus 527 -~~~~~~gt~~Y~aPE~~~~ 545 (631)
..+...+++.|+|||++..
T Consensus 175 ~d~~~~~~~~~~~~pe~~~~ 194 (365)
T PRK09188 175 EDLRHLLKHKRTYAPDALTP 194 (365)
T ss_pred hhhhhhhccCccCCcccCCh
Confidence 1246788999999999854
|
|
| >KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=98.81 E-value=2.7e-09 Score=119.17 Aligned_cols=117 Identities=19% Similarity=0.261 Sum_probs=86.3
Q ss_pred CCcEEEeeccccccCCCCcc--ccccccccCcccccccccccCCCCc-hhhHHHHHHHHHHHHcCCCCCCCCCCChHH--
Q 042825 506 DDMRVADFGLVRLVPENGKH--SILTKVAGTFGYLAPEYIVTGRITA-KVDVYSFGMILMDLITGRKVVDATHSDPEY-- 580 (631)
Q Consensus 506 ~~~kl~DFGla~~~~~~~~~--~~~~~~~gt~~Y~aPE~~~~~~~~~-k~DVwS~GvvL~ElltG~~P~~~~~~~~~~-- 580 (631)
+.+||+|||.+.....+... ......+|+-.|+|||.+.+..|++ .+||||.||++..|++|+.||......+..
T Consensus 457 g~lki~Dfg~~~vf~~~~e~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~ 536 (601)
T KOG0590|consen 457 GILKIIDFGAASVFRYPWEKNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFK 536 (601)
T ss_pred CceEEeecCcceeeccCcchhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccchh
Confidence 46799999999776533333 4566789999999999999999987 599999999999999999999755433211
Q ss_pred HHHHHHH------hHhhhc-CChhHHHHHHhhcCCChhhHHhHHHHHHH
Q 042825 581 IIHLATW------FQKMHK-NHDTFQMAIDKTIQLDEENLANVSTVAEL 622 (631)
Q Consensus 581 ~~~l~~~------~~~~~~-~~~~l~~~id~~L~~d~~~r~~~~~vl~l 622 (631)
...-..| ...++. ...+.+.++-++|+.+|..|.++.++++-
T Consensus 537 ~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~d 585 (601)
T KOG0590|consen 537 TNNYSDQRNIFEGPNRLLSLLPRETRIIIYRMLQLDPTKRITIEQILND 585 (601)
T ss_pred hhccccccccccChHHHHHhchhhHHHHHHHHccCChhheecHHHHhhC
Confidence 0001111 111221 23567899999999999999999998763
|
|
| >PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A | Back alignment and domain information |
|---|
Probab=98.81 E-value=3.9e-09 Score=81.16 Aligned_cols=61 Identities=49% Similarity=0.729 Sum_probs=51.6
Q ss_pred CCCcEEEccCCcccccCCCCCCCCccCcCCCCCCCEEEeecCcCcccCChhhccCCCCCCEEEccCCCC
Q 042825 168 PQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNNLL 236 (631)
Q Consensus 168 ~~L~~L~Ls~N~l~g~iP~~~~~~~~~~~~l~~L~~L~L~~N~l~g~iP~~~~~~l~~L~~L~ls~N~l 236 (631)
|+|++|+|++|+|+ .+|... |.++++|++|+|++|+++ .+|+..|..+++|++|++++|+|
T Consensus 1 p~L~~L~l~~n~l~-~i~~~~------f~~l~~L~~L~l~~N~l~-~i~~~~f~~l~~L~~L~l~~N~l 61 (61)
T PF13855_consen 1 PNLESLDLSNNKLT-EIPPDS------FSNLPNLETLDLSNNNLT-SIPPDAFSNLPNLRYLDLSNNNL 61 (61)
T ss_dssp TTESEEEETSSTES-EECTTT------TTTGTTESEEEETSSSES-EEETTTTTTSTTESEEEETSSSB
T ss_pred CcCcEEECCCCCCC-ccCHHH------HcCCCCCCEeEccCCccC-ccCHHHHcCCCCCCEEeCcCCcC
Confidence 57899999999999 777643 568999999999999998 56666699999999999999975
|
... |
| >KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.80 E-value=1.2e-08 Score=115.10 Aligned_cols=201 Identities=17% Similarity=0.173 Sum_probs=112.2
Q ss_pred CcccceeecCCCceEEEEEEecCCcEEEEEEEecCC--CCHHHHHHHHHHHHHHhc------------------------
Q 042825 419 NFSEENRLGRGGVGTVYKGELKDGTEVGVKRMELGS--VTEQGIAQFESEITVLTK------------------------ 472 (631)
Q Consensus 419 ~f~~~~~iG~G~fg~Vyk~~~~~g~~vAvK~l~~~~--~~~~~~~~~~~Ei~~l~~------------------------ 472 (631)
+|...+.+|++.|=+|.||+.++|. |+||++-+.. .+-...++-..|++....
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~eG~-vVvKVFvk~~p~~sL~~~~qrL~~ik~~l~~~pn~lPfqk~~~t~kAAylvRqy 102 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDREGL-VVVKVFVKQDPTISLRPFKQRLEEIKFALMKAPNCLPFQKVLVTDKAAYLVRQY 102 (1431)
T ss_pred ceeeecccCchhhhhhhhccCCCce-EEEEEEeccCCCCCchHHHHHHHHHHHHhhcCCcccchHHHHHhhHHHHHHHHH
Confidence 5666789999999999999998887 8899886543 222222222333332111
Q ss_pred --CChhHHhH------h----h-hhcCCCCCCHHHHHHHHHHhhcCCCc--------EEEeeccccccCCCCc-c----c
Q 042825 473 --GTLGRHLF------N----W-EEEGLEPLEWNTRLNIALDVARGDDM--------RVADFGLVRLVPENGK-H----S 526 (631)
Q Consensus 473 --gsL~~~L~------~----~-~~~~~~~L~~~~~~~I~~~ia~g~~~--------kl~DFGla~~~~~~~~-~----~ 526 (631)
-+|++.|. . | ..+....+.-.|+..|++|..+..++ -|+||.--|..+-... . .
T Consensus 103 vkhnLyDRlSTRPFL~~iEKkWiaFQLL~al~qcH~~gVcHGDIKsENILiTSWNW~~LtDFAsFKPtYLPeDNPadf~f 182 (1431)
T KOG1240|consen 103 VKHNLYDRLSTRPFLVLIEKKWIAFQLLKALSQCHKLGVCHGDIKSENILITSWNWLYLTDFASFKPTYLPEDNPADFTF 182 (1431)
T ss_pred HhhhhhhhhccchHHHHHHHHHHHHHHHHHHHHHHHcCccccccccceEEEeeechhhhhcccccCCccCCCCCcccceE
Confidence 22222211 0 0 00111223333333444333333333 2788876665431111 1 1
Q ss_pred cccccccCcccccccccccC-----------CCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCh--HHHHHHHHHhHhhh
Q 042825 527 ILTKVAGTFGYLAPEYIVTG-----------RITAKVDVYSFGMILMDLIT-GRKVVDATHSDP--EYIIHLATWFQKMH 592 (631)
Q Consensus 527 ~~~~~~gt~~Y~aPE~~~~~-----------~~~~k~DVwS~GvvL~Ellt-G~~P~~~~~~~~--~~~~~l~~~~~~~~ 592 (631)
...+...-..|+|||.+... ..+++.||||.|||+.|+++ |++||.-..--. ....+..+.+-+..
T Consensus 183 FFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~LSQL~aYr~~~~~~~e~~Le~I 262 (1431)
T KOG1240|consen 183 FFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTLSQLLAYRSGNADDPEQLLEKI 262 (1431)
T ss_pred EEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccHHHHHhHhccCccCHHHHHHhC
Confidence 11122233479999987531 16789999999999999998 788886210000 00000111111111
Q ss_pred cCChhHHHHHHhhcCCChhhHHhHHHHHH
Q 042825 593 KNHDTFQMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 593 ~~~~~l~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
+ ...++.+|-.|++.||..|.++.+.++
T Consensus 263 e-d~~~Rnlil~Mi~rdPs~RlSAedyL~ 290 (1431)
T KOG1240|consen 263 E-DVSLRNLILSMIQRDPSKRLSAEDYLQ 290 (1431)
T ss_pred c-CccHHHHHHHHHccCchhccCHHHHHH
Confidence 2 347899999999999999999998775
|
|
| >PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A | Back alignment and domain information |
|---|
Probab=98.73 E-value=4.6e-09 Score=98.28 Aligned_cols=61 Identities=30% Similarity=0.492 Sum_probs=16.0
Q ss_pred CCCCcEEEccCCcccccCCCCCCCCccCcCCCCCCCEEEeecCcCcccCChhhccCCCCCCEEEccCCCCc
Q 042825 167 FPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNNLLQ 237 (631)
Q Consensus 167 l~~L~~L~Ls~N~l~g~iP~~~~~~~~~~~~l~~L~~L~L~~N~l~g~iP~~~~~~l~~L~~L~ls~N~l~ 237 (631)
+.+|+.||||+|.++ .++. +..++.|++|+|++|+++ .++......+++|+.|+|++|++.
T Consensus 41 l~~L~~L~Ls~N~I~-~l~~--------l~~L~~L~~L~L~~N~I~-~i~~~l~~~lp~L~~L~L~~N~I~ 101 (175)
T PF14580_consen 41 LDKLEVLDLSNNQIT-KLEG--------LPGLPRLKTLDLSNNRIS-SISEGLDKNLPNLQELYLSNNKIS 101 (175)
T ss_dssp -TT--EEE-TTS--S---TT------------TT--EEE--SS----S-CHHHHHH-TT--EEE-TTS---
T ss_pred hcCCCEEECCCCCCc-cccC--------ccChhhhhhcccCCCCCC-ccccchHHhCCcCCEEECcCCcCC
Confidence 445555555555555 3331 224555555555555555 343221123455555555555554
|
|
| >PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A | Back alignment and domain information |
|---|
Probab=98.71 E-value=4.7e-09 Score=98.21 Aligned_cols=66 Identities=32% Similarity=0.529 Sum_probs=23.8
Q ss_pred CCCCCcEEEccCCcccccCCCCCCCCccCcCCCCCCCEEEeecCcCcccCChhhccCCCCCCEEEccCCCCcc
Q 042825 166 TFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNNLLQG 238 (631)
Q Consensus 166 ~l~~L~~L~Ls~N~l~g~iP~~~~~~~~~~~~l~~L~~L~L~~N~l~g~iP~~~~~~l~~L~~L~ls~N~l~g 238 (631)
.+++|+.|+|++|+++ .++..+ ...+++|+.|+|++|++...---..+..+++|+.|+|.+|.++.
T Consensus 62 ~L~~L~~L~L~~N~I~-~i~~~l------~~~lp~L~~L~L~~N~I~~l~~l~~L~~l~~L~~L~L~~NPv~~ 127 (175)
T PF14580_consen 62 GLPRLKTLDLSNNRIS-SISEGL------DKNLPNLQELYLSNNKISDLNELEPLSSLPKLRVLSLEGNPVCE 127 (175)
T ss_dssp --TT--EEE--SS----S-CHHH------HHH-TT--EEE-TTS---SCCCCGGGGG-TT--EEE-TT-GGGG
T ss_pred ChhhhhhcccCCCCCC-ccccch------HHhCCcCCEEECcCCcCCChHHhHHHHcCCCcceeeccCCcccc
Confidence 4667777777777776 444221 02466777777777776521111125566777777777776653
|
|
| >KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.71 E-value=1e-07 Score=94.61 Aligned_cols=153 Identities=16% Similarity=0.249 Sum_probs=101.1
Q ss_pred CcccceeecCCCceEEEEEE-ecCCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc-------------------------
Q 042825 419 NFSEENRLGRGGVGTVYKGE-LKDGTEVGVKRMELGSVTEQGIAQFESEITVLTK------------------------- 472 (631)
Q Consensus 419 ~f~~~~~iG~G~fg~Vyk~~-~~~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~------------------------- 472 (631)
.|.+.++||+|+||..+.|+ +-+++.||||.-......+ +.+.-.+-.++|..
T Consensus 29 hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS~AP-QLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVidLLG 107 (449)
T KOG1165|consen 29 HYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKSEAP-QLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVIDLLG 107 (449)
T ss_pred cceeccccccCcceeeecccccccCceEEEEeccccCCcc-hHHHHHHHHHHHcCCCCCCceeeeccccchhhhhhhhhC
Confidence 57889999999999999998 5579999999754432222 22222222333332
Q ss_pred CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC-----------------------------CCcEEEeeccccccCCCC
Q 042825 473 GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG-----------------------------DDMRVADFGLVRLVPENG 523 (631)
Q Consensus 473 gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g-----------------------------~~~kl~DFGla~~~~~~~ 523 (631)
.+|++. ++|.. ..++..+...||++...- ..+.|.|||+|+...+..
T Consensus 108 PSLEDL-FD~Cg---R~FSvKTV~miA~Qmi~rie~vH~k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~YrDp~ 183 (449)
T KOG1165|consen 108 PSLEDL-FDLCG---RRFSVKTVAMIAKQMITRIEYVHEKDLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYRDPK 183 (449)
T ss_pred cCHHHH-HHHhc---CcccHHhHHHHHHHHHHHHHHHHhcceeecccCccceeecCCCCCCCceEEEEeccchhhhcCcc
Confidence 233332 22322 223334444455443321 234599999999875332
Q ss_pred cc-----ccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCC
Q 042825 524 KH-----SILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHS 576 (631)
Q Consensus 524 ~~-----~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~ 576 (631)
+. .......||.+||+--...++.-+.+-|.=|+|-|++..+.|..||.+...
T Consensus 184 TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA 241 (449)
T KOG1165|consen 184 TKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKA 241 (449)
T ss_pred ccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccccccC
Confidence 21 123446799999999888888899999999999999999999999987543
|
|
| >cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily | Back alignment and domain information |
|---|
Probab=98.70 E-value=1.8e-09 Score=112.42 Aligned_cols=136 Identities=21% Similarity=0.239 Sum_probs=70.1
Q ss_pred CCeEEEEeCCCCCcccCcchhcCCcc---CceeecccCcccC----CCCc---Cc-ccccccccccccceecC----CCC
Q 042825 97 GQVTNIELQDQNRKGTVPPILKKLSS---MAVMYLENNQLRG----PIPS---LV-GSLEFFSAYEANISGTI----PDF 161 (631)
Q Consensus 97 ~~l~~l~l~~n~l~g~ip~~~~~l~~---L~~L~L~~N~l~g----~lP~---~~-~~L~~L~l~~n~l~g~i----p~~ 161 (631)
.+++.|++++|.+.+..+..+..+.+ |++|++++|++++ .+.. .. .+|+.|++++|++++.. +..
T Consensus 81 ~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~~~~~ 160 (319)
T cd00116 81 CGLQELDLSDNALGPDGCGVLESLLRSSSLQELKLNNNGLGDRGLRLLAKGLKDLPPALEKLVLGRNRLEGASCEALAKA 160 (319)
T ss_pred CceeEEEccCCCCChhHHHHHHHHhccCcccEEEeeCCccchHHHHHHHHHHHhCCCCceEEEcCCCcCCchHHHHHHHH
Confidence 35666666666666555555555544 6666666666652 1111 11 35666666666666322 222
Q ss_pred CCcCCCCCCcEEEccCCcccccCCCCCCCCccCcCCCCCCCEEEeecCcCccc----CChhhccCCCCCCEEEccCCCCc
Q 042825 162 IGTDTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGI----FPVSSFNNHPKLTTLNLTNNLLQ 237 (631)
Q Consensus 162 ~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~~~~~~~~l~~L~~L~L~~N~l~g~----iP~~~~~~l~~L~~L~ls~N~l~ 237 (631)
+. .+++|+.|+|++|.+++.....+. ..+..+++|++|+|++|.+++. ++. .+..+++|++|++++|.++
T Consensus 161 ~~--~~~~L~~L~l~~n~l~~~~~~~l~---~~l~~~~~L~~L~L~~n~i~~~~~~~l~~-~~~~~~~L~~L~ls~n~l~ 234 (319)
T cd00116 161 LR--ANRDLKELNLANNGIGDAGIRALA---EGLKANCNLEVLDLNNNGLTDEGASALAE-TLASLKSLEVLNLGDNNLT 234 (319)
T ss_pred HH--hCCCcCEEECcCCCCchHHHHHHH---HHHHhCCCCCEEeccCCccChHHHHHHHH-HhcccCCCCEEecCCCcCc
Confidence 22 345666666666666632110000 1122345666666666666532 121 2445566666666666665
Q ss_pred c
Q 042825 238 G 238 (631)
Q Consensus 238 g 238 (631)
+
T Consensus 235 ~ 235 (319)
T cd00116 235 D 235 (319)
T ss_pred h
Confidence 4
|
LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1). |
| >cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily | Back alignment and domain information |
|---|
Probab=98.69 E-value=1.6e-09 Score=112.73 Aligned_cols=158 Identities=18% Similarity=0.212 Sum_probs=110.8
Q ss_pred CeEEEEeCCCCCc------ccCcchhcCCccCceeecccCcccCCCCcCcc---c---cccccccccccee----cCCCC
Q 042825 98 QVTNIELQDQNRK------GTVPPILKKLSSMAVMYLENNQLRGPIPSLVG---S---LEFFSAYEANISG----TIPDF 161 (631)
Q Consensus 98 ~l~~l~l~~n~l~------g~ip~~~~~l~~L~~L~L~~N~l~g~lP~~~~---~---L~~L~l~~n~l~g----~ip~~ 161 (631)
+++.|+++++.+. ..++..+..+++|+.|+|++|.+.+..+..+. + |+.|++++|++++ .+...
T Consensus 52 ~l~~l~l~~~~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~ls~~~~~~~~~~~l~~~ 131 (319)
T cd00116 52 SLKELCLSLNETGRIPRGLQSLLQGLTKGCGLQELDLSDNALGPDGCGVLESLLRSSSLQELKLNNNGLGDRGLRLLAKG 131 (319)
T ss_pred CceEEeccccccCCcchHHHHHHHHHHhcCceeEEEccCCCCChhHHHHHHHHhccCcccEEEeeCCccchHHHHHHHHH
Confidence 4778888887776 34556788899999999999999865555443 3 9999999999873 23333
Q ss_pred CCcCCC-CCCcEEEccCCcccccCCCCCCCCccCcCCCCCCCEEEeecCcCccc----CChhhccCCCCCCEEEccCCCC
Q 042825 162 IGTDTF-PQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGI----FPVSSFNNHPKLTTLNLTNNLL 236 (631)
Q Consensus 162 ~~~~~l-~~L~~L~Ls~N~l~g~iP~~~~~~~~~~~~l~~L~~L~L~~N~l~g~----iP~~~~~~l~~L~~L~ls~N~l 236 (631)
+. .+ ++|+.|+|++|.+++..+..+. ..+..+.+|++|+|++|.+++. ++.. +..+++|+.|+|++|.+
T Consensus 132 l~--~~~~~L~~L~L~~n~l~~~~~~~~~---~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~-l~~~~~L~~L~L~~n~i 205 (319)
T cd00116 132 LK--DLPPALEKLVLGRNRLEGASCEALA---KALRANRDLKELNLANNGIGDAGIRALAEG-LKANCNLEVLDLNNNGL 205 (319)
T ss_pred HH--hCCCCceEEEcCCCcCCchHHHHHH---HHHHhCCCcCEEECcCCCCchHHHHHHHHH-HHhCCCCCEEeccCCcc
Confidence 44 45 8999999999999954332211 1245678999999999999853 3322 55667999999999998
Q ss_pred cccCCC-----CCCCCceEEeecCCCcccC
Q 042825 237 QGPTPR-----FNNSKLTVDMRTGSNCFCL 261 (631)
Q Consensus 237 ~g~~p~-----~~~~~~~~~l~~~~n~~~~ 261 (631)
++.... +........+++++|.+..
T Consensus 206 ~~~~~~~l~~~~~~~~~L~~L~ls~n~l~~ 235 (319)
T cd00116 206 TDEGASALAETLASLKSLEVLNLGDNNLTD 235 (319)
T ss_pred ChHHHHHHHHHhcccCCCCEEecCCCcCch
Confidence 754221 1112334456678887654
|
LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1). |
| >COG4886 Leucine-rich repeat (LRR) protein [Function unknown] | Back alignment and domain information |
|---|
Probab=98.64 E-value=1.5e-08 Score=109.04 Aligned_cols=158 Identities=24% Similarity=0.446 Sum_probs=101.9
Q ss_pred CCeEEEEeCCCCCcccCcchhcCCc-cCceeecccCcccCCCCcCc---ccccccccccccceecCCCCCCcCCCCCCcE
Q 042825 97 GQVTNIELQDQNRKGTVPPILKKLS-SMAVMYLENNQLRGPIPSLV---GSLEFFSAYEANISGTIPDFIGTDTFPQLSY 172 (631)
Q Consensus 97 ~~l~~l~l~~n~l~g~ip~~~~~l~-~L~~L~L~~N~l~g~lP~~~---~~L~~L~l~~n~l~g~ip~~~~~~~l~~L~~ 172 (631)
..++.|++.+|+++ .||+....+. +|+.|++++|++. .+|..+ .+|+.|++++|+++ .+|...+ .+++|+.
T Consensus 116 ~~l~~L~l~~n~i~-~i~~~~~~~~~nL~~L~l~~N~i~-~l~~~~~~l~~L~~L~l~~N~l~-~l~~~~~--~~~~L~~ 190 (394)
T COG4886 116 TNLTSLDLDNNNIT-DIPPLIGLLKSNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSFNDLS-DLPKLLS--NLSNLNN 190 (394)
T ss_pred cceeEEecCCcccc-cCccccccchhhcccccccccchh-hhhhhhhccccccccccCCchhh-hhhhhhh--hhhhhhh
Confidence 35777888888877 6777777774 7888888888887 554333 37778888888877 5666554 5677888
Q ss_pred EEccCCcccccCCCCCCC----------------CccCcCCCCCCCEEEeecCcCcccCChhhccCCCCCCEEEccCCCC
Q 042825 173 LDLGNNNLQGTIPSSFGM----------------PFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNNLL 236 (631)
Q Consensus 173 L~Ls~N~l~g~iP~~~~~----------------~~~~~~~l~~L~~L~L~~N~l~g~iP~~~~~~l~~L~~L~ls~N~l 236 (631)
|++++|+++ .+|..++. .+..+.++.++..|.+.+|++. .+|.. ++.+++|++|++++|++
T Consensus 191 L~ls~N~i~-~l~~~~~~~~~L~~l~~~~N~~~~~~~~~~~~~~l~~l~l~~n~~~-~~~~~-~~~l~~l~~L~~s~n~i 267 (394)
T COG4886 191 LDLSGNKIS-DLPPEIELLSALEELDLSNNSIIELLSSLSNLKNLSGLELSNNKLE-DLPES-IGNLSNLETLDLSNNQI 267 (394)
T ss_pred eeccCCccc-cCchhhhhhhhhhhhhhcCCcceecchhhhhcccccccccCCceee-eccch-hccccccceeccccccc
Confidence 888888887 77764310 1112456666666667777766 33433 66677777777777777
Q ss_pred cccCCCCCCCCceEEeecCCCcccCCC
Q 042825 237 QGPTPRFNNSKLTVDMRTGSNCFCLDD 263 (631)
Q Consensus 237 ~g~~p~~~~~~~~~~l~~~~n~~~~~~ 263 (631)
+-..+ .........+++++|.+....
T Consensus 268 ~~i~~-~~~~~~l~~L~~s~n~~~~~~ 293 (394)
T COG4886 268 SSISS-LGSLTNLRELDLSGNSLSNAL 293 (394)
T ss_pred ccccc-ccccCccCEEeccCccccccc
Confidence 65544 333333444556777666543
|
|
| >KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton] | Back alignment and domain information |
|---|
Probab=98.59 E-value=4e-09 Score=102.95 Aligned_cols=135 Identities=20% Similarity=0.256 Sum_probs=76.8
Q ss_pred ccCcchhcCCccCceeecccCcccCCCCcCc---ccccccccccccceecCCCCCCcCCCCCCcEEEccCCcccccCCCC
Q 042825 111 GTVPPILKKLSSMAVMYLENNQLRGPIPSLV---GSLEFFSAYEANISGTIPDFIGTDTFPQLSYLDLGNNNLQGTIPSS 187 (631)
Q Consensus 111 g~ip~~~~~l~~L~~L~L~~N~l~g~lP~~~---~~L~~L~l~~n~l~g~ip~~~~~~~l~~L~~L~Ls~N~l~g~iP~~ 187 (631)
|.+-..+-.-..|+.||||+|.++ .+-+++ ..++.|++++|.+.- +-. +. .+++|+.||||+|.|+ .+-..
T Consensus 274 G~~~~~~dTWq~LtelDLS~N~I~-~iDESvKL~Pkir~L~lS~N~i~~-v~n-La--~L~~L~~LDLS~N~Ls-~~~Gw 347 (490)
T KOG1259|consen 274 GSALVSADTWQELTELDLSGNLIT-QIDESVKLAPKLRRLILSQNRIRT-VQN-LA--ELPQLQLLDLSGNLLA-ECVGW 347 (490)
T ss_pred CceEEecchHhhhhhccccccchh-hhhhhhhhccceeEEeccccceee-ehh-hh--hcccceEeecccchhH-hhhhh
Confidence 333333444455667777777776 444332 366777777777652 222 44 5677888888888777 44321
Q ss_pred CCCCccCcCCCCCCCEEEeecCcCcccCChhhccCCCCCCEEEccCCCCccc--CCCCCCCCceEEeecCCCcccC
Q 042825 188 FGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNNLLQGP--TPRFNNSKLTVDMRTGSNCFCL 261 (631)
Q Consensus 188 ~~~~~~~~~~l~~L~~L~L~~N~l~g~iP~~~~~~l~~L~~L~ls~N~l~g~--~p~~~~~~~~~~l~~~~n~~~~ 261 (631)
-..|.+.++|.|+.|.+. .+. . ++.+-+|.+||+++|++... +-.+..+.-.-.+.+.+|.+.+
T Consensus 348 -------h~KLGNIKtL~La~N~iE-~LS-G-L~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~~ 413 (490)
T KOG1259|consen 348 -------HLKLGNIKTLKLAQNKIE-TLS-G-LRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPLAG 413 (490)
T ss_pred -------HhhhcCEeeeehhhhhHh-hhh-h-hHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCccc
Confidence 124566677777777776 333 2 56667777778887776421 2222222222223446777766
|
|
| >COG4886 Leucine-rich repeat (LRR) protein [Function unknown] | Back alignment and domain information |
|---|
Probab=98.56 E-value=3.8e-08 Score=105.92 Aligned_cols=145 Identities=27% Similarity=0.441 Sum_probs=109.4
Q ss_pred EEEeCCCCCcccCcchhcCCccCceeecccCcccCCCCcCcc----cccccccccccceecCCCCCCcCCCCCCcEEEcc
Q 042825 101 NIELQDQNRKGTVPPILKKLSSMAVMYLENNQLRGPIPSLVG----SLEFFSAYEANISGTIPDFIGTDTFPQLSYLDLG 176 (631)
Q Consensus 101 ~l~l~~n~l~g~ip~~~~~l~~L~~L~L~~N~l~g~lP~~~~----~L~~L~l~~n~l~g~ip~~~~~~~l~~L~~L~Ls 176 (631)
.+++..|.+...+ ..+..++.++.|++.+|.++ .+|.... +|+.|++++|++. .+|..++ .+++|+.|+++
T Consensus 97 ~l~~~~~~~~~~~-~~~~~~~~l~~L~l~~n~i~-~i~~~~~~~~~nL~~L~l~~N~i~-~l~~~~~--~l~~L~~L~l~ 171 (394)
T COG4886 97 SLDLNLNRLRSNI-SELLELTNLTSLDLDNNNIT-DIPPLIGLLKSNLKELDLSDNKIE-SLPSPLR--NLPNLKNLDLS 171 (394)
T ss_pred eeeccccccccCc-hhhhcccceeEEecCCcccc-cCccccccchhhcccccccccchh-hhhhhhh--ccccccccccC
Confidence 5888888876433 34667789999999999999 6665432 6999999999998 6777777 89999999999
Q ss_pred CCcccccCCCCCCCCccCcCCCCCCCEEEeecCcCcccCChhhccCCCCCCEEEccCCCCcccCCCCCCCCceEEeecCC
Q 042825 177 NNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNNLLQGPTPRFNNSKLTVDMRTGS 256 (631)
Q Consensus 177 ~N~l~g~iP~~~~~~~~~~~~l~~L~~L~L~~N~l~g~iP~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~~~~~~l~~~~ 256 (631)
+|+++ .+|... +.++.|+.|++++|+++ .+|.. ......|+.|.+++|.+.-.+...........+.+.+
T Consensus 172 ~N~l~-~l~~~~-------~~~~~L~~L~ls~N~i~-~l~~~-~~~~~~L~~l~~~~N~~~~~~~~~~~~~~l~~l~l~~ 241 (394)
T COG4886 172 FNDLS-DLPKLL-------SNLSNLNNLDLSGNKIS-DLPPE-IELLSALEELDLSNNSIIELLSSLSNLKNLSGLELSN 241 (394)
T ss_pred Cchhh-hhhhhh-------hhhhhhhheeccCCccc-cCchh-hhhhhhhhhhhhcCCcceecchhhhhcccccccccCC
Confidence 99999 888653 27899999999999999 88864 4566669999999996444444333332333333566
Q ss_pred Cccc
Q 042825 257 NCFC 260 (631)
Q Consensus 257 n~~~ 260 (631)
|++.
T Consensus 242 n~~~ 245 (394)
T COG4886 242 NKLE 245 (394)
T ss_pred ceee
Confidence 6554
|
|
| >KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=98.49 E-value=5.7e-07 Score=103.27 Aligned_cols=153 Identities=15% Similarity=0.148 Sum_probs=102.5
Q ss_pred HHhhcCCcccceeecCCCceEEEEEEecCCcEEEEEEEecCCC-----CHHHHHHHHH-HH----HHHh-----------
Q 042825 413 LRNATNNFSEENRLGRGGVGTVYKGELKDGTEVGVKRMELGSV-----TEQGIAQFES-EI----TVLT----------- 471 (631)
Q Consensus 413 l~~~t~~f~~~~~iG~G~fg~Vyk~~~~~g~~vAvK~l~~~~~-----~~~~~~~~~~-Ei----~~l~----------- 471 (631)
.+...+.|.+.+.||+|+||.||+|...+|+.||+|.=+.... ..+...+..- +. .+..
T Consensus 693 ~~~~~~~~~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~~WEfYI~~q~~~RLk~~~~~~~~~~~~a~~~~~~S~lv 772 (974)
T KOG1166|consen 693 FEVGGEKFCISKEIGEGSYGSVYVATHSNGKLVALKVEKPPNPWEFYICLQVMERLKPQMLPSIMHISSAHVFQNASVLV 772 (974)
T ss_pred eeecceeEEEEeeeccccceEEEEeecCCCcEEEEEeecCCCceeeeehHHHHHhhchhhhcchHHHHHHHccCCcceee
Confidence 3444567889999999999999999988899999998665432 1222223220 00 0000
Q ss_pred -----cCChhHHhHhhhhcCCCCCCH----------------HHHHHHHHHhhcC---------------CCcEEEeecc
Q 042825 472 -----KGTLGRHLFNWEEEGLEPLEW----------------NTRLNIALDVARG---------------DDMRVADFGL 515 (631)
Q Consensus 472 -----~gsL~~~L~~~~~~~~~~L~~----------------~~~~~I~~~ia~g---------------~~~kl~DFGl 515 (631)
.|+|-+++. ..+..+| .|+..|+++..+. ..++|+|||.
T Consensus 773 ~ey~~~Gtlld~~N-----~~~~m~e~lv~~~~~qml~ive~lH~~~IIHgDiKPDNfll~~~~~~~~~~~~l~lIDfG~ 847 (974)
T KOG1166|consen 773 SEYSPYGTLLDLIN-----TNKVMDEYLVMFFSCQMLRIVEHLHAMGIIHGDIKPDNFLLRREICADSDSKGLYLIDFGR 847 (974)
T ss_pred eeccccccHHHhhc-----cCCCCCchhhhHHHHHHHHHHHHHHhcceecccCCcceeEeecccCCCCcccceEEEeccc
Confidence 077766664 1222333 3333444444433 2357999999
Q ss_pred ccccCCCCccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCC
Q 042825 516 VRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKV 570 (631)
Q Consensus 516 a~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P 570 (631)
+-.+..-.........++|-++-.+|+..++.++..+|-|.+.-+++-|+.|+..
T Consensus 848 siDm~lfp~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y~ 902 (974)
T KOG1166|consen 848 SIDMKLFPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKYM 902 (974)
T ss_pred ceeeeEcCCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHHH
Confidence 9655321112345677889999999999999999999999999999999999754
|
|
| >KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.48 E-value=2.7e-07 Score=98.97 Aligned_cols=148 Identities=19% Similarity=0.249 Sum_probs=93.9
Q ss_pred CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC-------------------------CCcEEEeeccccccCCCCcccc
Q 042825 473 GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG-------------------------DDMRVADFGLVRLVPENGKHSI 527 (631)
Q Consensus 473 gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g-------------------------~~~kl~DFGla~~~~~~~~~~~ 527 (631)
|+|.+.+.. ....++|.-...++.++++| -.+|++|||+............
T Consensus 32 Gsl~D~i~~----~~~~~d~~F~~s~~rdi~~Gl~ylh~s~i~~hg~l~s~nClvd~~w~lklt~~Gl~~~~~~~~~~~~ 107 (484)
T KOG1023|consen 32 GSLLDILSN----EDIKLDYFFILSFIRDISKGLAYLHNSPIGYHGALKSSNCLVDSRWVLKLTDFGLNSLLEETAEPEA 107 (484)
T ss_pred ccHHhHHhc----cccCccHHHHHHHHHHHHHHHHHHhcCcceeeeeeccccceeeeeEEEEechhhhcccccccccccc
Confidence 556666542 33456777777777777766 2368999999887632111111
Q ss_pred ccccccCcccccccccccCC-------CCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHhHh-----h----
Q 042825 528 LTKVAGTFGYLAPEYIVTGR-------ITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQK-----M---- 591 (631)
Q Consensus 528 ~~~~~gt~~Y~aPE~~~~~~-------~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~~~-----~---- 591 (631)
.....-..-|.|||.+.... .+.++||||||++++|+++.+.||+.....+.. ..+..+++. .
T Consensus 108 ~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~~~~~~~~~~~~~-~eii~~~~~~~~~~~rP~i 186 (484)
T KOG1023|consen 108 HHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRSGPFDLRNLVEDP-DEIILRVKKGGSNPFRPSI 186 (484)
T ss_pred cchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhccCccccccccCCh-HHHHHHHHhcCCCCcCcch
Confidence 11222445789999987642 467899999999999999999999864333221 112222221 0
Q ss_pred h---cCChhHHHHHHhhcCCChhhHHhHHHHHHHHHh
Q 042825 592 H---KNHDTFQMAIDKTIQLDEENLANVSTVAELGDH 625 (631)
Q Consensus 592 ~---~~~~~l~~~id~~L~~d~~~r~~~~~vl~lal~ 625 (631)
. ...+++..++..+...+|..||++.++-..+..
T Consensus 187 ~~~~e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~~~ 223 (484)
T KOG1023|consen 187 ELLNELPPELLLLVARCWEEIPEKRPSIEQIRSKLLT 223 (484)
T ss_pred hhhhhcchHHHHHHHHhcccChhhCccHHHHHhhhhh
Confidence 0 112357778888888888999988877665543
|
|
| >KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.47 E-value=2.9e-07 Score=87.69 Aligned_cols=156 Identities=19% Similarity=0.226 Sum_probs=96.8
Q ss_pred cCCcccceeecCCCceEEEEEE-ecCCcEEEEEEEecCCCCHHHHHHHHHHH---HHHhc--------------------
Q 042825 417 TNNFSEENRLGRGGVGTVYKGE-LKDGTEVGVKRMELGSVTEQGIAQFESEI---TVLTK-------------------- 472 (631)
Q Consensus 417 t~~f~~~~~iG~G~fg~Vyk~~-~~~g~~vAvK~l~~~~~~~~~~~~~~~Ei---~~l~~-------------------- 472 (631)
...|...+.||.|+||.+|.|. ..+|..||||.-...... -+...|. .++..
T Consensus 14 ~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~h----pqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvlV 89 (341)
T KOG1163|consen 14 GGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKAKH----PQLLYESKVYRILQGGVGIPHIRHYGTEKDYNVLV 89 (341)
T ss_pred ccceEEEEeecCCchhheeeeeeccCCceEEEEeecccCCC----cchhHHHHHHHHhccCCCCchhhhhccccccceee
Confidence 3578899999999999999998 567999999976543211 1122222 22322
Q ss_pred -----CChhHHhHhhhhc-------------CCCCCCHHHHHHHHHHhhcC-----------CCcEEEeeccccccCCCC
Q 042825 473 -----GTLGRHLFNWEEE-------------GLEPLEWNTRLNIALDVARG-----------DDMRVADFGLVRLVPENG 523 (631)
Q Consensus 473 -----gsL~~~L~~~~~~-------------~~~~L~~~~~~~I~~~ia~g-----------~~~kl~DFGla~~~~~~~ 523 (631)
.+|++.+.- ... -...+.+.|....++...+. ..+-++|||+|+...+..
T Consensus 90 MdLLGPsLEdLfnf-C~R~ftmkTvLMLaDQml~RiEyvH~r~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~d~~ 168 (341)
T KOG1163|consen 90 MDLLGPSLEDLFNF-CSRRFTMKTVLMLADQMLSRIEYVHLRNFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYRDIR 168 (341)
T ss_pred eeccCccHHHHHHH-HhhhhhHHhHHHHHHHHHHHHHHHHhhccccccCCccceeeccccccceEEEEeccchhhhcccc
Confidence 233332211 100 00112222222222222222 234599999998765322
Q ss_pred cc-----ccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCC
Q 042825 524 KH-----SILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSD 577 (631)
Q Consensus 524 ~~-----~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~ 577 (631)
+. .......||.+|.+--...+..-+.+.|+=|+|.+|...-.|..||.+....
T Consensus 169 t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~ 227 (341)
T KOG1163|consen 169 TRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKAA 227 (341)
T ss_pred ccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccchh
Confidence 21 1224467999998877666667788999999999999999999999876543
|
|
| >PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A | Back alignment and domain information |
|---|
Probab=98.44 E-value=1.8e-07 Score=71.83 Aligned_cols=60 Identities=38% Similarity=0.574 Sum_probs=44.1
Q ss_pred cccccccccccceecCCCCCCcCCCCCCcEEEccCCcccccCCCCCCCCccCcCCCCCCCEEEeecCcC
Q 042825 143 SLEFFSAYEANISGTIPDFIGTDTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKL 211 (631)
Q Consensus 143 ~L~~L~l~~n~l~g~ip~~~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~~~~~~~~l~~L~~L~L~~N~l 211 (631)
+|+.|++++|+++..-+..+. .+++|++|+|++|+++ .+|+.. |.++++|++|+|++|+|
T Consensus 2 ~L~~L~l~~n~l~~i~~~~f~--~l~~L~~L~l~~N~l~-~i~~~~------f~~l~~L~~L~l~~N~l 61 (61)
T PF13855_consen 2 NLESLDLSNNKLTEIPPDSFS--NLPNLETLDLSNNNLT-SIPPDA------FSNLPNLRYLDLSNNNL 61 (61)
T ss_dssp TESEEEETSSTESEECTTTTT--TGTTESEEEETSSSES-EEETTT------TTTSTTESEEEETSSSB
T ss_pred cCcEEECCCCCCCccCHHHHc--CCCCCCEeEccCCccC-ccCHHH------HcCCCCCCEEeCcCCcC
Confidence 355556666666543345566 7899999999999998 566432 56899999999999985
|
... |
| >KOG1859 consensus Leucine-rich repeat proteins [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.35 E-value=1.4e-08 Score=109.78 Aligned_cols=127 Identities=20% Similarity=0.253 Sum_probs=89.5
Q ss_pred CeEEEEeCCCCCcccCcchhcCCccCceeecccCcccCCCCc--CcccccccccccccceecCCCCCCcCCCCCCcEEEc
Q 042825 98 QVTNIELQDQNRKGTVPPILKKLSSMAVMYLENNQLRGPIPS--LVGSLEFFSAYEANISGTIPDFIGTDTFPQLSYLDL 175 (631)
Q Consensus 98 ~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~L~~N~l~g~lP~--~~~~L~~L~l~~n~l~g~ip~~~~~~~l~~L~~L~L 175 (631)
.+...+.+.|.|. .+..++.-++.|+.|+|++|+|+. +-. .+..|+.|||+.|+++ .+|.. +...+ .|+.|+|
T Consensus 165 ~L~~a~fsyN~L~-~mD~SLqll~ale~LnLshNk~~~-v~~Lr~l~~LkhLDlsyN~L~-~vp~l-~~~gc-~L~~L~l 239 (1096)
T KOG1859|consen 165 KLATASFSYNRLV-LMDESLQLLPALESLNLSHNKFTK-VDNLRRLPKLKHLDLSYNCLR-HVPQL-SMVGC-KLQLLNL 239 (1096)
T ss_pred hHhhhhcchhhHH-hHHHHHHHHHHhhhhccchhhhhh-hHHHHhcccccccccccchhc-ccccc-chhhh-hheeeee
Confidence 4566667777777 677778888899999999999973 221 2237888888888887 45532 22233 4888899
Q ss_pred cCCcccccCCCCCCCCccCcCCCCCCCEEEeecCcCcccCChhhccCCCCCCEEEccCCCCcc
Q 042825 176 GNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNNLLQG 238 (631)
Q Consensus 176 s~N~l~g~iP~~~~~~~~~~~~l~~L~~L~L~~N~l~g~iP~~~~~~l~~L~~L~ls~N~l~g 238 (631)
++|.++ ++- .+.+|.+|+.|||++|-|++.---..++.+..|+.|+|.+|.+.-
T Consensus 240 rnN~l~-tL~--------gie~LksL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl~c 293 (1096)
T KOG1859|consen 240 RNNALT-TLR--------GIENLKSLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPLCC 293 (1096)
T ss_pred cccHHH-hhh--------hHHhhhhhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCcccc
Confidence 999888 432 256888999999999988754221225667788889999987754
|
|
| >KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.33 E-value=4.2e-08 Score=99.42 Aligned_cols=241 Identities=21% Similarity=0.231 Sum_probs=142.5
Q ss_pred hhhhhhhhhhccccccccccCCCCCCCChhhHHHHHH-HHHhCCCCCC----C-CC--CCCCCCCccceeeC------CC
Q 042825 31 LEREKTERVQGDRRKKRRKIPSASSNQSRPDAAVMQD-LKASFVIPKR----L-KW--SDPDPCQWSHVICS------DD 96 (631)
Q Consensus 31 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~k~~~~~~~~----~-~w--~~~~~C~w~gv~C~------~~ 96 (631)
..+.+|+||+|+.|+++..-|.+..-....-...+.. .|..- .+.. + +- -.-++|. +.|- ..
T Consensus 88 ~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~NkI~~-l~k~~F~gL~slqrLllNan~---i~Cir~~al~dL 163 (498)
T KOG4237|consen 88 KTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNKITD-LPKGAFGGLSSLQRLLLNANH---INCIRQDALRDL 163 (498)
T ss_pred cchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCchhh-hhhhHhhhHHHHHHHhcChhh---hcchhHHHHHHh
Confidence 3789999999999999966666654332211111111 00000 0000 0 00 0001111 2232 12
Q ss_pred CCeEEEEeCCCCCcccCcc-hhcCCccCceeecccCcccC------------CCCcCcc---------------------
Q 042825 97 GQVTNIELQDQNRKGTVPP-ILKKLSSMAVMYLENNQLRG------------PIPSLVG--------------------- 142 (631)
Q Consensus 97 ~~l~~l~l~~n~l~g~ip~-~~~~l~~L~~L~L~~N~l~g------------~lP~~~~--------------------- 142 (631)
..+..|.|.+|.+. .|+. .|..+..++.+.+..|.+.- ..|..++
T Consensus 164 ~~l~lLslyDn~~q-~i~~~tf~~l~~i~tlhlA~np~icdCnL~wla~~~a~~~ietsgarc~~p~rl~~~Ri~q~~a~ 242 (498)
T KOG4237|consen 164 PSLSLLSLYDNKIQ-SICKGTFQGLAAIKTLHLAQNPFICDCNLPWLADDLAMNPIETSGARCVSPYRLYYKRINQEDAR 242 (498)
T ss_pred hhcchhcccchhhh-hhccccccchhccchHhhhcCccccccccchhhhHHhhchhhcccceecchHHHHHHHhcccchh
Confidence 35566777888877 5555 78888888888888887321 1222221
Q ss_pred ----ccccc--cc-ccccceecCCCCCCcCCCCCCcEEEccCCcccccCCCCCCCCccCcCCCCCCCEEEeecCcCcccC
Q 042825 143 ----SLEFF--SA-YEANISGTIPDFIGTDTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIF 215 (631)
Q Consensus 143 ----~L~~L--~l-~~n~l~g~ip~~~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~~~~~~~~l~~L~~L~L~~N~l~g~i 215 (631)
.++.+ .+ +....-+.-|..- ...|++|+.|+|++|++++.-+.+ |..+..|++|+|..|+|. .+
T Consensus 243 kf~c~~esl~s~~~~~d~~d~~cP~~c-f~~L~~L~~lnlsnN~i~~i~~~a-------Fe~~a~l~eL~L~~N~l~-~v 313 (498)
T KOG4237|consen 243 KFLCSLESLPSRLSSEDFPDSICPAKC-FKKLPNLRKLNLSNNKITRIEDGA-------FEGAAELQELYLTRNKLE-FV 313 (498)
T ss_pred hhhhhHHhHHHhhccccCcCCcChHHH-HhhcccceEeccCCCccchhhhhh-------hcchhhhhhhhcCcchHH-HH
Confidence 01111 01 1111222222211 127899999999999999544433 568999999999999998 77
Q ss_pred ChhhccCCCCCCEEEccCCCCcccCCCCCCC-CceEEeecCCCcccCCCCCCccCccchhhHHhhhhcCCCchhhcccCC
Q 042825 216 PVSSFNNHPKLTTLNLTNNLLQGPTPRFNNS-KLTVDMRTGSNCFCLDDPGLACDSRVNILLSIAESMGYPEVLAESRKG 294 (631)
Q Consensus 216 P~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~-~~~~~l~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 294 (631)
-..+|..+..|+.|+|.+|+++-.-|..+.. .....+++-.|.|+ |..+..-+.+.... ....|
T Consensus 314 ~~~~f~~ls~L~tL~L~~N~it~~~~~aF~~~~~l~~l~l~~Np~~-------CnC~l~wl~~Wlr~--------~~~~~ 378 (498)
T KOG4237|consen 314 SSGMFQGLSGLKTLSLYDNQITTVAPGAFQTLFSLSTLNLLSNPFN-------CNCRLAWLGEWLRK--------KSVVG 378 (498)
T ss_pred HHHhhhccccceeeeecCCeeEEEecccccccceeeeeehccCccc-------CccchHHHHHHHhh--------CCCCC
Confidence 7778999999999999999999988876553 23334555666654 55555555555432 11346
Q ss_pred CCCCCC
Q 042825 295 NDPCPT 300 (631)
Q Consensus 295 ~~~~~~ 300 (631)
+.+|..
T Consensus 379 ~~~Cq~ 384 (498)
T KOG4237|consen 379 NPRCQS 384 (498)
T ss_pred CCCCCC
Confidence 666763
|
|
| >KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton] | Back alignment and domain information |
|---|
Probab=98.31 E-value=6.2e-08 Score=94.76 Aligned_cols=104 Identities=21% Similarity=0.206 Sum_probs=78.0
Q ss_pred ccccccccccccceecCCCCCCcCCCCCCcEEEccCCcccccCCCCCCCCccCcCCCCCCCEEEeecCcCcccCChhhcc
Q 042825 142 GSLEFFSAYEANISGTIPDFIGTDTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFN 221 (631)
Q Consensus 142 ~~L~~L~l~~n~l~g~ip~~~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~~~~~~~~l~~L~~L~L~~N~l~g~iP~~~~~ 221 (631)
..|+.|||++|.++ .|-+++. -+|+++.|+||+|.+. .+-. +..|++|+.||||+|.|+ .+-. +--
T Consensus 284 q~LtelDLS~N~I~-~iDESvK--L~Pkir~L~lS~N~i~-~v~n--------La~L~~L~~LDLS~N~Ls-~~~G-wh~ 349 (490)
T KOG1259|consen 284 QELTELDLSGNLIT-QIDESVK--LAPKLRRLILSQNRIR-TVQN--------LAELPQLQLLDLSGNLLA-ECVG-WHL 349 (490)
T ss_pred hhhhhccccccchh-hhhhhhh--hccceeEEecccccee-eehh--------hhhcccceEeecccchhH-hhhh-hHh
Confidence 37999999999988 5777766 6799999999999998 4442 458899999999999998 5553 355
Q ss_pred CCCCCCEEEccCCCCcccCCCCCCCCceEEeecCCCccc
Q 042825 222 NHPKLTTLNLTNNLLQGPTPRFNNSKLTVDMRTGSNCFC 260 (631)
Q Consensus 222 ~l~~L~~L~ls~N~l~g~~p~~~~~~~~~~l~~~~n~~~ 260 (631)
.+.+++.|.|+.|.+...- ....+-..+.+++++|++.
T Consensus 350 KLGNIKtL~La~N~iE~LS-GL~KLYSLvnLDl~~N~Ie 387 (490)
T KOG1259|consen 350 KLGNIKTLKLAQNKIETLS-GLRKLYSLVNLDLSSNQIE 387 (490)
T ss_pred hhcCEeeeehhhhhHhhhh-hhHhhhhheeccccccchh
Confidence 7788999999999875321 1122223566778888874
|
|
| >KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.03 E-value=8.7e-08 Score=83.50 Aligned_cols=111 Identities=21% Similarity=0.305 Sum_probs=64.0
Q ss_pred eCCCCCeEEEEeCCCCCcccCcch---hcCCccCceeecccCcccCCCCcCcc----cccccccccccceecCCCCCCcC
Q 042825 93 CSDDGQVTNIELQDQNRKGTVPPI---LKKLSSMAVMYLENNQLRGPIPSLVG----SLEFFSAYEANISGTIPDFIGTD 165 (631)
Q Consensus 93 C~~~~~l~~l~l~~n~l~g~ip~~---~~~l~~L~~L~L~~N~l~g~lP~~~~----~L~~L~l~~n~l~g~ip~~~~~~ 165 (631)
|.....+..++|+++.+. .++.. +.....|+..+|++|.|. .+|..+. .++.|+|++|.++ .+|.++.
T Consensus 23 cedakE~h~ldLssc~lm-~i~davy~l~~~~el~~i~ls~N~fk-~fp~kft~kf~t~t~lNl~~neis-dvPeE~A-- 97 (177)
T KOG4579|consen 23 CEDAKELHFLDLSSCQLM-YIADAVYMLSKGYELTKISLSDNGFK-KFPKKFTIKFPTATTLNLANNEIS-DVPEELA-- 97 (177)
T ss_pred hHHHHHhhhcccccchhh-HHHHHHHHHhCCceEEEEecccchhh-hCCHHHhhccchhhhhhcchhhhh-hchHHHh--
Confidence 444445567788887775 55554 445556677788888887 5554432 3455555555555 4555554
Q ss_pred CCCCCcEEEccCCcccccCCCCCCCCccCcCCCCCCCEEEeecCcCcccCCh
Q 042825 166 TFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPV 217 (631)
Q Consensus 166 ~l~~L~~L~Ls~N~l~g~iP~~~~~~~~~~~~l~~L~~L~L~~N~l~g~iP~ 217 (631)
.++.|+.|+++.|.|. ..|.-+ ..|.+|-.|+..+|.+. +||.
T Consensus 98 am~aLr~lNl~~N~l~-~~p~vi-------~~L~~l~~Lds~~na~~-eid~ 140 (177)
T KOG4579|consen 98 AMPALRSLNLRFNPLN-AEPRVI-------APLIKLDMLDSPENARA-EIDV 140 (177)
T ss_pred hhHHhhhcccccCccc-cchHHH-------HHHHhHHHhcCCCCccc-cCcH
Confidence 5555666666666555 444332 23555555555555555 4553
|
|
| >cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain | Back alignment and domain information |
|---|
Probab=98.01 E-value=1.2e-05 Score=77.03 Aligned_cols=31 Identities=19% Similarity=0.346 Sum_probs=27.9
Q ss_pred ceeecCCCceEEEEEEecCCcEEEEEEEecC
Q 042825 423 ENRLGRGGVGTVYKGELKDGTEVGVKRMELG 453 (631)
Q Consensus 423 ~~~iG~G~fg~Vyk~~~~~g~~vAvK~l~~~ 453 (631)
...||+|+||.||+|..++|+.||||+++..
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~ 32 (190)
T cd05147 2 NGCISTGKEANVYHATTANGEERAIKIYKTS 32 (190)
T ss_pred CCccccccceEEEEEECCCCCEEEEEEEEec
Confidence 3689999999999999888999999999764
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c |
| >KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=98.00 E-value=3.9e-06 Score=86.56 Aligned_cols=136 Identities=23% Similarity=0.236 Sum_probs=82.6
Q ss_pred eCCCCCeEEEEeCCCCCcccCcch-hcCCccCceeecccCcccC----CCCcCcccccccccccccceecCCCCCCcCCC
Q 042825 93 CSDDGQVTNIELQDQNRKGTVPPI-LKKLSSMAVMYLENNQLRG----PIPSLVGSLEFFSAYEANISGTIPDFIGTDTF 167 (631)
Q Consensus 93 C~~~~~l~~l~l~~n~l~g~ip~~-~~~l~~L~~L~L~~N~l~g----~lP~~~~~L~~L~l~~n~l~g~ip~~~~~~~l 167 (631)
|+...+++.|+|+.|.+.-..... -..+++|+.|.|+.+.|+- .+-..+++|+.|+|..|..-+ -.......+
T Consensus 168 ~eqLp~Le~LNls~Nrl~~~~~s~~~~~l~~lK~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~~~~--~~~~~~~i~ 245 (505)
T KOG3207|consen 168 AEQLPSLENLNLSSNRLSNFISSNTTLLLSHLKQLVLNSCGLSWKDVQWILLTFPSLEVLYLEANEIIL--IKATSTKIL 245 (505)
T ss_pred HHhcccchhcccccccccCCccccchhhhhhhheEEeccCCCCHHHHHHHHHhCCcHHHhhhhcccccc--eecchhhhh
Confidence 344567788888888876443332 2356777888888877762 222344578888888775211 111111245
Q ss_pred CCCcEEEccCCcccccCCCCCCCCccCcCCCCCCCEEEeecCcCcccC--Chh----hccCCCCCCEEEccCCCCc
Q 042825 168 PQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIF--PVS----SFNNHPKLTTLNLTNNLLQ 237 (631)
Q Consensus 168 ~~L~~L~Ls~N~l~g~iP~~~~~~~~~~~~l~~L~~L~L~~N~l~g~i--P~~----~~~~l~~L~~L~ls~N~l~ 237 (631)
..|+.|||++|++- ..+.. +..+.++.|+.|+++.+.++ +| |+. -...+++|++|+++.|++.
T Consensus 246 ~~L~~LdLs~N~li-~~~~~-----~~~~~l~~L~~Lnls~tgi~-si~~~d~~s~~kt~~f~kL~~L~i~~N~I~ 314 (505)
T KOG3207|consen 246 QTLQELDLSNNNLI-DFDQG-----YKVGTLPGLNQLNLSSTGIA-SIAEPDVESLDKTHTFPKLEYLNISENNIR 314 (505)
T ss_pred hHHhhccccCCccc-ccccc-----cccccccchhhhhccccCcc-hhcCCCccchhhhcccccceeeecccCccc
Confidence 67888888888776 45421 12457777888888877776 33 211 0135677888888888764
|
|
| >KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=97.91 E-value=2.9e-06 Score=87.48 Aligned_cols=155 Identities=24% Similarity=0.266 Sum_probs=106.9
Q ss_pred CCeEEEEeCCCCCccc--CcchhcCCccCceeecccCcccCCCCc----CcccccccccccccceecCCCCCCcCCCCCC
Q 042825 97 GQVTNIELQDQNRKGT--VPPILKKLSSMAVMYLENNQLRGPIPS----LVGSLEFFSAYEANISGTIPDFIGTDTFPQL 170 (631)
Q Consensus 97 ~~l~~l~l~~n~l~g~--ip~~~~~l~~L~~L~L~~N~l~g~lP~----~~~~L~~L~l~~n~l~g~ip~~~~~~~l~~L 170 (631)
.+|+.|||+.|-+..- +-.-...|++|+.|+|+.|.|.-...+ .+..|+.|.|+.|.|+-.-=..+. ..+|+|
T Consensus 146 ~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~~l~~lK~L~l~~CGls~k~V~~~~-~~fPsl 224 (505)
T KOG3207|consen 146 PNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTTLLLSHLKQLVLNSCGLSWKDVQWIL-LTFPSL 224 (505)
T ss_pred CcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccchhhhhhhheEEeccCCCCHHHHHHHH-HhCCcH
Confidence 5799999999998843 233456899999999999999744333 244899999999999732111111 268999
Q ss_pred cEEEccCCcccccCCCCCCCCccCcCCCCCCCEEEeecCcCcccCCh-hhccCCCCCCEEEccCCCCccc-CCCCCC---
Q 042825 171 SYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPV-SSFNNHPKLTTLNLTNNLLQGP-TPRFNN--- 245 (631)
Q Consensus 171 ~~L~Ls~N~l~g~iP~~~~~~~~~~~~l~~L~~L~L~~N~l~g~iP~-~~~~~l~~L~~L~ls~N~l~g~-~p~~~~--- 245 (631)
+.|+|..|... +-... ....+..|+.|||++|++- .++. ...+.++.|+.|+++.+.++.. .|+...
T Consensus 225 ~~L~L~~N~~~--~~~~~-----~~~i~~~L~~LdLs~N~li-~~~~~~~~~~l~~L~~Lnls~tgi~si~~~d~~s~~k 296 (505)
T KOG3207|consen 225 EVLYLEANEII--LIKAT-----STKILQTLQELDLSNNNLI-DFDQGYKVGTLPGLNQLNLSSTGIASIAEPDVESLDK 296 (505)
T ss_pred HHhhhhccccc--ceecc-----hhhhhhHHhhccccCCccc-ccccccccccccchhhhhccccCcchhcCCCccchhh
Confidence 99999999522 11111 1235689999999999987 4441 2367899999999999988763 454311
Q ss_pred ---CCceEEeecCCCccc
Q 042825 246 ---SKLTVDMRTGSNCFC 260 (631)
Q Consensus 246 ---~~~~~~l~~~~n~~~ 260 (631)
...+..|+++.|++.
T Consensus 297 t~~f~kL~~L~i~~N~I~ 314 (505)
T KOG3207|consen 297 THTFPKLEYLNISENNIR 314 (505)
T ss_pred hcccccceeeecccCccc
Confidence 123345666788764
|
|
| >KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=97.90 E-value=1.6e-05 Score=81.14 Aligned_cols=107 Identities=14% Similarity=0.156 Sum_probs=68.3
Q ss_pred cEEEeeccccccCCC----CccccccccccCcccccccccccCC-----C-CchhhHHHHHHHHHHHHcCCCCCCCCCCC
Q 042825 508 MRVADFGLVRLVPEN----GKHSILTKVAGTFGYLAPEYIVTGR-----I-TAKVDVYSFGMILMDLITGRKVVDATHSD 577 (631)
Q Consensus 508 ~kl~DFGla~~~~~~----~~~~~~~~~~gt~~Y~aPE~~~~~~-----~-~~k~DVwS~GvvL~ElltG~~P~~~~~~~ 577 (631)
+.|+|||.+-.-... ...+..-...|.-.-||||+..... . -.|+|.|+.|.+.||+++...||....+.
T Consensus 384 LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem 463 (598)
T KOG4158|consen 384 LVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATAVPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEM 463 (598)
T ss_pred EEEcccceeeeccccccccccccccccCCCcceecchhhhhcCCCCceeeccchhhhhhhhhhHHHHhccCCcccccchh
Confidence 469999987421100 0011112245677889999975432 2 35899999999999999999999863221
Q ss_pred hHHHHHHHHHhHhhh-----cCChhHHHHHHhhcCCChhhHHhHH
Q 042825 578 PEYIIHLATWFQKMH-----KNHDTFQMAIDKTIQLDEENLANVS 617 (631)
Q Consensus 578 ~~~~~~l~~~~~~~~-----~~~~~l~~~id~~L~~d~~~r~~~~ 617 (631)
......+-+..+ .....++++|...|+.||.+|++..
T Consensus 464 ---~L~~r~Yqe~qLPalp~~vpp~~rqlV~~lL~r~pskRvsp~ 505 (598)
T KOG4158|consen 464 ---LLDTRTYQESQLPALPSRVPPVARQLVFDLLKRDPSKRVSPN 505 (598)
T ss_pred ---eechhhhhhhhCCCCcccCChHHHHHHHHHhcCCccccCCcc
Confidence 112222222111 1235789999999999999997754
|
|
| >PF08263 LRRNT_2: Leucine rich repeat N-terminal domain; InterPro: IPR013210 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape [] | Back alignment and domain information |
|---|
Probab=97.89 E-value=1.5e-05 Score=56.18 Aligned_cols=36 Identities=33% Similarity=0.751 Sum_probs=25.5
Q ss_pred hhhHHHHHHHHHhCCC-CC--CCCCCC---CCCCCccceeeC
Q 042825 59 RPDAAVMQDLKASFVI-PK--RLKWSD---PDPCQWSHVICS 94 (631)
Q Consensus 59 ~~~~~~l~~~k~~~~~-~~--~~~w~~---~~~C~w~gv~C~ 94 (631)
+.|..+|++||.++.. +. ..+|+. .+||+|.||+|+
T Consensus 2 ~~d~~aLl~~k~~l~~~~~~~l~~W~~~~~~~~C~W~GV~Cd 43 (43)
T PF08263_consen 2 NQDRQALLAFKKSLNNDPSGVLSSWNPSSDSDPCSWSGVTCD 43 (43)
T ss_dssp HHHHHHHHHHHHCTT-SC-CCCTT--TT--S-CCCSTTEEE-
T ss_pred cHHHHHHHHHHHhcccccCcccccCCCcCCCCCeeeccEEeC
Confidence 4689999999999984 42 238943 699999999995
|
LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions [, ].Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response []. Sequence analyses of LRR proteins suggested the existence of several different subfamilies of LRRs. The significance of this classification is that repeats from different subfamilies never occur simultaneously and have most probably evolved independently. It is, however, now clear that all major classes of LRR have curved horseshoe structures with a parallel beta sheet on the concave side and mostly helical elements on the convex side. At least six families of LRR proteins, characterised by different lengths and consensus sequences of the repeats, have been identified. Eleven-residue segments of the LRRs (LxxLxLxxN/CxL), corresponding to the beta-strand and adjacent loop regions, are conserved in LRR proteins, whereas the remaining parts of the repeats (herein termed variable) may be very different. Despite the differences, each of the variable parts contains two half-turns at both ends and a "linear" segment (as the chain follows a linear path overall), usually formed by a helix, in the middle. The concave face and the adjacent loops are the most common protein interaction surfaces on LRR proteins. 3D structure of some LRR proteins-ligand complexes show that the concave surface of LRR domain is ideal for interaction with alpha-helix, thus supporting earlier conclusions that the elongated and curved LRR structure provides an outstanding framework for achieving diverse protein-protein interactions []. Molecular modeling suggests that the conserved pattern LxxLxL, which is shorter than the previously proposed LxxLxLxxN/CxL is sufficient to impart the characteristic horseshoe curvature to proteins with 20- to 30-residue repeats []. This domain is often found at the N terminus of tandem leucine rich repeats.; PDB: 3RGZ_A 3RJ0_A 3RIZ_A 3RGX_A 1OGQ_A. |
| >PRK10359 lipopolysaccharide core biosynthesis protein; Provisional | Back alignment and domain information |
|---|
Probab=97.87 E-value=6.6e-06 Score=80.54 Aligned_cols=56 Identities=11% Similarity=-0.044 Sum_probs=40.7
Q ss_pred hcCCcccceeecCCCceEEEEEEecCCcEEEEEEEecCCCCH-HHHHH------HHHHHHHHhc
Q 042825 416 ATNNFSEENRLGRGGVGTVYKGELKDGTEVGVKRMELGSVTE-QGIAQ------FESEITVLTK 472 (631)
Q Consensus 416 ~t~~f~~~~~iG~G~fg~Vyk~~~~~g~~vAvK~l~~~~~~~-~~~~~------~~~Ei~~l~~ 472 (631)
..++|...+++|.|+||.||.... ++..+|||.+....... ..... +++|+..+.+
T Consensus 29 l~~~y~~~~~l~~~~f~~v~l~~~-~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~r 91 (232)
T PRK10359 29 LSYNIKTIKVFRNIDDTKVSLIDT-DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDR 91 (232)
T ss_pred hhCceEEEEEecCCCceEEEEEec-CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHH
Confidence 357899999999999999999655 57789999997543322 22222 5788776655
|
|
| >PF12799 LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_A 1XEU_A 2OMX_A 2OMU_A 2UZY_A 2WQU_D 1D0B_A 2WQW_A 1OTO_A 2WQV_B | Back alignment and domain information |
|---|
Probab=97.87 E-value=7e-06 Score=58.12 Aligned_cols=36 Identities=42% Similarity=0.710 Sum_probs=17.2
Q ss_pred CCcEEEccCCcccccCCCCCCCCccCcCCCCCCCEEEeecCcCc
Q 042825 169 QLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLT 212 (631)
Q Consensus 169 ~L~~L~Ls~N~l~g~iP~~~~~~~~~~~~l~~L~~L~L~~N~l~ 212 (631)
+|++|+|++|+++ .+|+. +++|++|++|+|++|+++
T Consensus 2 ~L~~L~l~~N~i~-~l~~~-------l~~l~~L~~L~l~~N~i~ 37 (44)
T PF12799_consen 2 NLEELDLSNNQIT-DLPPE-------LSNLPNLETLNLSNNPIS 37 (44)
T ss_dssp T-SEEEETSSS-S-SHGGH-------GTTCTTSSEEEETSSCCS
T ss_pred cceEEEccCCCCc-ccCch-------HhCCCCCCEEEecCCCCC
Confidence 4555555555555 44432 235555555555555555
|
... |
| >PF12799 LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_A 1XEU_A 2OMX_A 2OMU_A 2UZY_A 2WQU_D 1D0B_A 2WQW_A 1OTO_A 2WQV_B | Back alignment and domain information |
|---|
Probab=97.80 E-value=1.8e-05 Score=56.07 Aligned_cols=38 Identities=42% Similarity=0.677 Sum_probs=32.7
Q ss_pred CCCCEEEeecCcCcccCChhhccCCCCCCEEEccCCCCcc
Q 042825 199 STLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNNLLQG 238 (631)
Q Consensus 199 ~~L~~L~L~~N~l~g~iP~~~~~~l~~L~~L~ls~N~l~g 238 (631)
++|++|+|++|+++ .+|+. ++.|++|+.|++++|+++.
T Consensus 1 ~~L~~L~l~~N~i~-~l~~~-l~~l~~L~~L~l~~N~i~~ 38 (44)
T PF12799_consen 1 KNLEELDLSNNQIT-DLPPE-LSNLPNLETLNLSNNPISD 38 (44)
T ss_dssp TT-SEEEETSSS-S-SHGGH-GTTCTTSSEEEETSSCCSB
T ss_pred CcceEEEccCCCCc-ccCch-HhCCCCCCEEEecCCCCCC
Confidence 47999999999999 78865 8999999999999999984
|
... |
| >KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.76 E-value=5e-07 Score=78.86 Aligned_cols=102 Identities=25% Similarity=0.333 Sum_probs=50.0
Q ss_pred CceeecccCcccCCCCcCcc------cccccccccccceecCCCCCCcCCCCCCcEEEccCCcccccCCCCCCCCccCcC
Q 042825 123 MAVMYLENNQLRGPIPSLVG------SLEFFSAYEANISGTIPDFIGTDTFPQLSYLDLGNNNLQGTIPSSFGMPFADIS 196 (631)
Q Consensus 123 L~~L~L~~N~l~g~lP~~~~------~L~~L~l~~n~l~g~ip~~~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~~~~~~~ 196 (631)
+..++|++.+|- .+++... .|+..+|++|.|. .+|..+.. .++.++.|+|++|.++ .+|.. +.
T Consensus 29 ~h~ldLssc~lm-~i~davy~l~~~~el~~i~ls~N~fk-~fp~kft~-kf~t~t~lNl~~neis-dvPeE-------~A 97 (177)
T KOG4579|consen 29 LHFLDLSSCQLM-YIADAVYMLSKGYELTKISLSDNGFK-KFPKKFTI-KFPTATTLNLANNEIS-DVPEE-------LA 97 (177)
T ss_pred hhhcccccchhh-HHHHHHHHHhCCceEEEEecccchhh-hCCHHHhh-ccchhhhhhcchhhhh-hchHH-------Hh
Confidence 344555555553 3333221 3444555555554 34444431 3345555555555555 55543 23
Q ss_pred CCCCCCEEEeecCcCcccCChhhccCCCCCCEEEccCCCCc
Q 042825 197 NLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNNLLQ 237 (631)
Q Consensus 197 ~l~~L~~L~L~~N~l~g~iP~~~~~~l~~L~~L~ls~N~l~ 237 (631)
.++.|+.|+++.|.|. ..|.. +..+.+|-.|+..+|.+.
T Consensus 98 am~aLr~lNl~~N~l~-~~p~v-i~~L~~l~~Lds~~na~~ 136 (177)
T KOG4579|consen 98 AMPALRSLNLRFNPLN-AEPRV-IAPLIKLDMLDSPENARA 136 (177)
T ss_pred hhHHhhhcccccCccc-cchHH-HHHHHhHHHhcCCCCccc
Confidence 5555555555555555 44443 333555555555555443
|
|
| >PRK12274 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=97.75 E-value=4.5e-05 Score=73.29 Aligned_cols=154 Identities=12% Similarity=0.001 Sum_probs=88.6
Q ss_pred ccceeecCCCceEEEEEEecCCcEEEEEEEecCCCC--HHHHHHHHHHHHHHhcC-------------------------
Q 042825 421 SEENRLGRGGVGTVYKGELKDGTEVGVKRMELGSVT--EQGIAQFESEITVLTKG------------------------- 473 (631)
Q Consensus 421 ~~~~~iG~G~fg~Vyk~~~~~g~~vAvK~l~~~~~~--~~~~~~~~~Ei~~l~~g------------------------- 473 (631)
.....|++|+||+||.+.- .+..++.+.+...... .-....|.+|+++|.+-
T Consensus 5 ~~~~~l~~~~f~~v~~~~~-~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~~~~~lvmeyI~G~ 83 (218)
T PRK12274 5 AVNEPLKSDTFGRILLVRG-GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHWDGRHLDRSYLAGA 83 (218)
T ss_pred ccceeecCCCcceEEEeec-CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEEcCEEEEEeeecCc
Confidence 3567899999999997665 5777887777544321 11233588999999871
Q ss_pred ChhHHhHh----hhhcCCCCCCHHHHHHHHHHhh-cC--------CCcEEEeeccccccCCCCcc----c------c-cc
Q 042825 474 TLGRHLFN----WEEEGLEPLEWNTRLNIALDVA-RG--------DDMRVADFGLVRLVPENGKH----S------I-LT 529 (631)
Q Consensus 474 sL~~~L~~----~~~~~~~~L~~~~~~~I~~~ia-~g--------~~~kl~DFGla~~~~~~~~~----~------~-~~ 529 (631)
+|.+.+.. +..+....+...|+..|+++.. +. +.++|+|||+|........- . . ..
T Consensus 84 ~L~~~~~~~~~~~~~qi~~~L~~lH~~GIvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~~~~~r~L~~rDl~~llk~ 163 (218)
T PRK12274 84 AMYQRPPRGDLAYFRAARRLLQQLHRCGVAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPRARWMRLLAREDLRHLLKH 163 (218)
T ss_pred cHHhhhhhhhHHHHHHHHHHHHHHHHCcCccCCCCCcceEEEcCCCCEEEEECCCceecCCcchHHHHHHHHHHHHHHHH
Confidence 11111100 0000011122223333333333 11 45789999999865432210 0 0 00
Q ss_pred ccccCcccccccccccC-CCC-chhhHHHHHHHHHHHHcCCCCCCCCC
Q 042825 530 KVAGTFGYLAPEYIVTG-RIT-AKVDVYSFGMILMDLITGRKVVDATH 575 (631)
Q Consensus 530 ~~~gt~~Y~aPE~~~~~-~~~-~k~DVwS~GvvL~ElltG~~P~~~~~ 575 (631)
-...++.|++|+...-. ..+ ...+.++-|.-+|.++||+.++.++.
T Consensus 164 ~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~~~ 211 (218)
T PRK12274 164 KRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWEDN 211 (218)
T ss_pred HHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCccccC
Confidence 12357788888754322 333 56788899999999999999876543
|
|
| >cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain | Back alignment and domain information |
|---|
Probab=97.72 E-value=0.00014 Score=69.77 Aligned_cols=31 Identities=26% Similarity=0.414 Sum_probs=27.9
Q ss_pred ceeecCCCceEEEEEEecCCcEEEEEEEecC
Q 042825 423 ENRLGRGGVGTVYKGELKDGTEVGVKRMELG 453 (631)
Q Consensus 423 ~~~iG~G~fg~Vyk~~~~~g~~vAvK~l~~~ 453 (631)
...||+|+||.||+|+..+|+.||||+++..
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~ 32 (190)
T cd05145 2 NGCISTGKEANVYHARTGDGEELAVKIYKTS 32 (190)
T ss_pred CceeecCCCcEEEEEEcCCCCEEEEEEEEcC
Confidence 4689999999999999878999999999865
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro |
| >KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=97.62 E-value=1e-05 Score=87.53 Aligned_cols=39 Identities=23% Similarity=0.241 Sum_probs=16.6
Q ss_pred hcCCccCceeecccCcccCCCC--cCcccccccccccccce
Q 042825 117 LKKLSSMAVMYLENNQLRGPIP--SLVGSLEFFSAYEANIS 155 (631)
Q Consensus 117 ~~~l~~L~~L~L~~N~l~g~lP--~~~~~L~~L~l~~n~l~ 155 (631)
+..+.+|..|+|.+|+|.+... +.+.+|++|++++|+++
T Consensus 91 l~~~~~l~~l~l~~n~i~~i~~~l~~~~~L~~L~ls~N~I~ 131 (414)
T KOG0531|consen 91 LSKLKSLEALDLYDNKIEKIENLLSSLVNLQVLDLSFNKIT 131 (414)
T ss_pred cccccceeeeeccccchhhcccchhhhhcchheeccccccc
Confidence 4444445555555555543222 12234444444444443
|
|
| >KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=97.48 E-value=8.4e-06 Score=91.44 Aligned_cols=110 Identities=24% Similarity=0.373 Sum_probs=78.4
Q ss_pred CcEEEeeccccccCC-CCcccccccccc-CcccccccccccCC-CCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHH
Q 042825 507 DMRVADFGLVRLVPE-NGKHSILTKVAG-TFGYLAPEYIVTGR-ITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIH 583 (631)
Q Consensus 507 ~~kl~DFGla~~~~~-~~~~~~~~~~~g-t~~Y~aPE~~~~~~-~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~ 583 (631)
.++++|||+|..... .+........+| ++.|+|||...+.. ..+..|+||.|+++.-+++|..|++...... ..
T Consensus 163 ~l~~~df~~At~~~~~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~---~~ 239 (601)
T KOG0590|consen 163 ALKIADFGLATAYRNKNGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKD---GR 239 (601)
T ss_pred cccCCCchhhccccccCCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCcccccccc---cc
Confidence 688999999988764 344444556788 99999999988754 4678999999999999999999997544332 11
Q ss_pred HHHHhHhh--------hcCChhHHHHHHhhcCCChhhHHhHHHH
Q 042825 584 LATWFQKM--------HKNHDTFQMAIDKTIQLDEENLANVSTV 619 (631)
Q Consensus 584 l~~~~~~~--------~~~~~~l~~~id~~L~~d~~~r~~~~~v 619 (631)
...|.... -.......+++++++..++..|.++.++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~k~l~~~~~~r~s~~~~ 283 (601)
T KOG0590|consen 240 YSSWKSNKGRFTQLPWNSISDQAHDLLHKILKENPSNRLSIEEL 283 (601)
T ss_pred ceeecccccccccCccccCChhhhhcccccccCCchhccccccc
Confidence 22232221 1123567788888887778877766543
|
|
| >KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=97.43 E-value=3.2e-05 Score=83.72 Aligned_cols=127 Identities=24% Similarity=0.321 Sum_probs=88.4
Q ss_pred CCeEEEEeCCCCCcccCcchhcCCccCceeecccCcccCCCC-cCcccccccccccccceecCCCCCCcCCCCCCcEEEc
Q 042825 97 GQVTNIELQDQNRKGTVPPILKKLSSMAVMYLENNQLRGPIP-SLVGSLEFFSAYEANISGTIPDFIGTDTFPQLSYLDL 175 (631)
Q Consensus 97 ~~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~L~~N~l~g~lP-~~~~~L~~L~l~~n~l~g~ip~~~~~~~l~~L~~L~L 175 (631)
..++.|++.+|.+.+ +...+..+.+|++|+|++|+|+..-+ ..+..|+.|++++|.++. +. .+. .+++|+.+++
T Consensus 95 ~~l~~l~l~~n~i~~-i~~~l~~~~~L~~L~ls~N~I~~i~~l~~l~~L~~L~l~~N~i~~-~~-~~~--~l~~L~~l~l 169 (414)
T KOG0531|consen 95 KSLEALDLYDNKIEK-IENLLSSLVNLQVLDLSFNKITKLEGLSTLTLLKELNLSGNLISD-IS-GLE--SLKSLKLLDL 169 (414)
T ss_pred cceeeeeccccchhh-cccchhhhhcchheeccccccccccchhhccchhhheeccCcchh-cc-CCc--cchhhhcccC
Confidence 578999999999994 54447889999999999999985433 234479999999999873 33 333 5789999999
Q ss_pred cCCcccccCCCCCCCCccCcCCCCCCCEEEeecCcCcccCChhhccCCCCCCEEEccCCCCcc
Q 042825 176 GNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNNLLQG 238 (631)
Q Consensus 176 s~N~l~g~iP~~~~~~~~~~~~l~~L~~L~L~~N~l~g~iP~~~~~~l~~L~~L~ls~N~l~g 238 (631)
++|++. .+... + +..+.+|+.+++..|.+. .+. . +..+..+..+++..|.++-
T Consensus 170 ~~n~i~-~ie~~-----~-~~~~~~l~~l~l~~n~i~-~i~-~-~~~~~~l~~~~l~~n~i~~ 222 (414)
T KOG0531|consen 170 SYNRIV-DIEND-----E-LSELISLEELDLGGNSIR-EIE-G-LDLLKKLVLLSLLDNKISK 222 (414)
T ss_pred Ccchhh-hhhhh-----h-hhhccchHHHhccCCchh-ccc-c-hHHHHHHHHhhccccccee
Confidence 999998 66541 0 125677777777777766 332 1 3334444444555555543
|
|
| >KOG1859 consensus Leucine-rich repeat proteins [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.40 E-value=6e-06 Score=89.92 Aligned_cols=103 Identities=25% Similarity=0.283 Sum_probs=81.5
Q ss_pred CCeEEEEeCCCCCcccCcchhcCCccCceeecccCcccCCCCcCc--c-cccccccccccceecCCCCCCcCCCCCCcEE
Q 042825 97 GQVTNIELQDQNRKGTVPPILKKLSSMAVMYLENNQLRGPIPSLV--G-SLEFFSAYEANISGTIPDFIGTDTFPQLSYL 173 (631)
Q Consensus 97 ~~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~L~~N~l~g~lP~~~--~-~L~~L~l~~n~l~g~ip~~~~~~~l~~L~~L 173 (631)
..+.+|+|++|.++. .. .+..|..|++|||+.|.|+ .+|..- + .|..|.+++|-++.- ..+. +|.+|+.|
T Consensus 187 ~ale~LnLshNk~~~-v~-~Lr~l~~LkhLDlsyN~L~-~vp~l~~~gc~L~~L~lrnN~l~tL--~gie--~LksL~~L 259 (1096)
T KOG1859|consen 187 PALESLNLSHNKFTK-VD-NLRRLPKLKHLDLSYNCLR-HVPQLSMVGCKLQLLNLRNNALTTL--RGIE--NLKSLYGL 259 (1096)
T ss_pred HHhhhhccchhhhhh-hH-HHHhcccccccccccchhc-cccccchhhhhheeeeecccHHHhh--hhHH--hhhhhhcc
Confidence 467899999999984 33 7889999999999999998 777632 2 799999999988732 1233 78999999
Q ss_pred EccCCcccccCCCCCCCCccCcCCCCCCCEEEeecCcCc
Q 042825 174 DLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLT 212 (631)
Q Consensus 174 ~Ls~N~l~g~iP~~~~~~~~~~~~l~~L~~L~L~~N~l~ 212 (631)
|||+|-|++.=-- ..+..|..|..|+|.+|.+-
T Consensus 260 DlsyNll~~hseL------~pLwsLs~L~~L~LeGNPl~ 292 (1096)
T KOG1859|consen 260 DLSYNLLSEHSEL------EPLWSLSSLIVLWLEGNPLC 292 (1096)
T ss_pred chhHhhhhcchhh------hHHHHHHHHHHHhhcCCccc
Confidence 9999999853111 12567889999999999885
|
|
| >cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain | Back alignment and domain information |
|---|
Probab=97.39 E-value=0.00021 Score=68.99 Aligned_cols=42 Identities=31% Similarity=0.295 Sum_probs=33.9
Q ss_pred HHHhhcCCcccceeecCCCceEEEEEEecCCcEEEEEEEecC
Q 042825 412 VLRNATNNFSEENRLGRGGVGTVYKGELKDGTEVGVKRMELG 453 (631)
Q Consensus 412 ~l~~~t~~f~~~~~iG~G~fg~Vyk~~~~~g~~vAvK~l~~~ 453 (631)
++.+.-..|...+.||+|+||.||++..++|+.||||++...
T Consensus 9 ~~~~~~~~~~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~ 50 (198)
T cd05144 9 TLVKRGVVESLGNQIGVGKESDVYLALDPDGNPVALKFHRLG 50 (198)
T ss_pred HHHHcCchhhcCCccccCcceEEEEEEcCCCCEEEEEEEecc
Confidence 444444447778999999999999999888999999987653
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom |
| >PRK15386 type III secretion protein GogB; Provisional | Back alignment and domain information |
|---|
Probab=97.30 E-value=0.00057 Score=72.02 Aligned_cols=75 Identities=19% Similarity=0.402 Sum_probs=48.8
Q ss_pred CeEEEEeCCCCCcccCcchhcCCccCceeeccc-CcccCCCCcCcc-cccccccccc-cceecCCCCCCcCCCCCCcEEE
Q 042825 98 QVTNIELQDQNRKGTVPPILKKLSSMAVMYLEN-NQLRGPIPSLVG-SLEFFSAYEA-NISGTIPDFIGTDTFPQLSYLD 174 (631)
Q Consensus 98 ~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~L~~-N~l~g~lP~~~~-~L~~L~l~~n-~l~g~ip~~~~~~~l~~L~~L~ 174 (631)
.+..|+++++.++ .+|. --.+|+.|.+++ ++++ .+|..+. +|+.|++++| ++. .+|. .|+.|+
T Consensus 53 ~l~~L~Is~c~L~-sLP~---LP~sLtsL~Lsnc~nLt-sLP~~LP~nLe~L~Ls~Cs~L~-sLP~--------sLe~L~ 118 (426)
T PRK15386 53 ASGRLYIKDCDIE-SLPV---LPNELTEITIENCNNLT-TLPGSIPEGLEKLTVCHCPEIS-GLPE--------SVRSLE 118 (426)
T ss_pred CCCEEEeCCCCCc-ccCC---CCCCCcEEEccCCCCcc-cCCchhhhhhhheEccCccccc-cccc--------ccceEE
Confidence 5678888888777 5662 223688888887 5564 6676555 7888888888 443 4553 466666
Q ss_pred ccCCccc--ccCCC
Q 042825 175 LGNNNLQ--GTIPS 186 (631)
Q Consensus 175 Ls~N~l~--g~iP~ 186 (631)
++.|.+. +.+|+
T Consensus 119 L~~n~~~~L~~LPs 132 (426)
T PRK15386 119 IKGSATDSIKNVPN 132 (426)
T ss_pred eCCCCCcccccCcc
Confidence 7666542 24553
|
|
| >KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=97.25 E-value=0.00011 Score=85.59 Aligned_cols=80 Identities=25% Similarity=0.351 Sum_probs=41.9
Q ss_pred cccccccccccceecCCCCCCcCCCCCCcEEEccCCcccccCCCCCCCCccCcCCCCCCCEEEeecCcCcccCChhhccC
Q 042825 143 SLEFFSAYEANISGTIPDFIGTDTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNN 222 (631)
Q Consensus 143 ~L~~L~l~~n~l~g~ip~~~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~~~~~~~~l~~L~~L~L~~N~l~g~iP~~~~~~ 222 (631)
.|.+|||+.|.=-+.+|.+++ .|-+|++|+|++..++ .+|..+ ++|++|.+|++.++.-...+|. ....
T Consensus 572 ~LrVLDLs~~~~l~~LP~~I~--~Li~LryL~L~~t~I~-~LP~~l-------~~Lk~L~~Lnl~~~~~l~~~~~-i~~~ 640 (889)
T KOG4658|consen 572 LLRVLDLSGNSSLSKLPSSIG--ELVHLRYLDLSDTGIS-HLPSGL-------GNLKKLIYLNLEVTGRLESIPG-ILLE 640 (889)
T ss_pred ceEEEECCCCCccCcCChHHh--hhhhhhcccccCCCcc-ccchHH-------HHHHhhheeccccccccccccc-hhhh
Confidence 455555555444445555555 5555556666655555 555443 2555556666655554434442 2444
Q ss_pred CCCCCEEEccC
Q 042825 223 HPKLTTLNLTN 233 (631)
Q Consensus 223 l~~L~~L~ls~ 233 (631)
|.+|++|.+-.
T Consensus 641 L~~Lr~L~l~~ 651 (889)
T KOG4658|consen 641 LQSLRVLRLPR 651 (889)
T ss_pred cccccEEEeec
Confidence 55555555543
|
|
| >PRK15386 type III secretion protein GogB; Provisional | Back alignment and domain information |
|---|
Probab=97.19 E-value=0.00096 Score=70.38 Aligned_cols=67 Identities=18% Similarity=0.310 Sum_probs=50.5
Q ss_pred hhcCCccCceeecccCcccCCCCcCcccccccccccccceecCCCCCCcCCCCCCcEEEccCC-cccccCCCCC
Q 042825 116 ILKKLSSMAVMYLENNQLRGPIPSLVGSLEFFSAYEANISGTIPDFIGTDTFPQLSYLDLGNN-NLQGTIPSSF 188 (631)
Q Consensus 116 ~~~~l~~L~~L~L~~N~l~g~lP~~~~~L~~L~l~~n~l~g~ip~~~~~~~l~~L~~L~Ls~N-~l~g~iP~~~ 188 (631)
.+-.+.++..|++++|.|+ .+|....+|+.|.++++.--..+|..+. ++|+.|++++| ++. .+|.++
T Consensus 47 r~~~~~~l~~L~Is~c~L~-sLP~LP~sLtsL~Lsnc~nLtsLP~~LP----~nLe~L~Ls~Cs~L~-sLP~sL 114 (426)
T PRK15386 47 QIEEARASGRLYIKDCDIE-SLPVLPNELTEITIENCNNLTTLPGSIP----EGLEKLTVCHCPEIS-GLPESV 114 (426)
T ss_pred HHHHhcCCCEEEeCCCCCc-ccCCCCCCCcEEEccCCCCcccCCchhh----hhhhheEccCccccc-cccccc
Confidence 3555788999999999988 7785444899999988433246776553 58999999998 665 788554
|
|
| >KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=97.18 E-value=0.00018 Score=83.95 Aligned_cols=103 Identities=23% Similarity=0.386 Sum_probs=84.7
Q ss_pred CeEEEEeCCCCC-cccCcch-hcCCccCceeecccCcccCCCCcCcc---cccccccccccceecCCCCCCcCCCCCCcE
Q 042825 98 QVTNIELQDQNR-KGTVPPI-LKKLSSMAVMYLENNQLRGPIPSLVG---SLEFFSAYEANISGTIPDFIGTDTFPQLSY 172 (631)
Q Consensus 98 ~l~~l~l~~n~l-~g~ip~~-~~~l~~L~~L~L~~N~l~g~lP~~~~---~L~~L~l~~n~l~g~ip~~~~~~~l~~L~~ 172 (631)
.+++|-+..|.. ...++.. |..++.|++|||++|.=-+.+|..++ +|++|++++..++ .+|..++ +|.+|.+
T Consensus 546 ~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~Li~LryL~L~~t~I~-~LP~~l~--~Lk~L~~ 622 (889)
T KOG4658|consen 546 KLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGELVHLRYLDLSDTGIS-HLPSGLG--NLKKLIY 622 (889)
T ss_pred ccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCccCcCChHHhhhhhhhcccccCCCcc-ccchHHH--HHHhhhe
Confidence 688888888862 2355554 67799999999999876679999988 8999999999998 8999999 8999999
Q ss_pred EEccCCcccccCCCCCCCCccCcCCCCCCCEEEeecCc
Q 042825 173 LDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNK 210 (631)
Q Consensus 173 L~Ls~N~l~g~iP~~~~~~~~~~~~l~~L~~L~L~~N~ 210 (631)
||+.++.-...+|.. +..|.+|++|.|..-.
T Consensus 623 Lnl~~~~~l~~~~~i-------~~~L~~Lr~L~l~~s~ 653 (889)
T KOG4658|consen 623 LNLEVTGRLESIPGI-------LLELQSLRVLRLPRSA 653 (889)
T ss_pred eccccccccccccch-------hhhcccccEEEeeccc
Confidence 999998876566533 2369999999997765
|
|
| >smart00090 RIO RIO-like kinase | Back alignment and domain information |
|---|
Probab=97.14 E-value=0.0014 Score=65.24 Aligned_cols=35 Identities=23% Similarity=0.202 Sum_probs=30.7
Q ss_pred CcccceeecCCCceEEEEEE--ecCCcEEEEEEEecC
Q 042825 419 NFSEENRLGRGGVGTVYKGE--LKDGTEVGVKRMELG 453 (631)
Q Consensus 419 ~f~~~~~iG~G~fg~Vyk~~--~~~g~~vAvK~l~~~ 453 (631)
.|...+.||+|+||.||+|+ ..+|+.||||+++..
T Consensus 29 ~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~ 65 (237)
T smart00090 29 LSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTG 65 (237)
T ss_pred hHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcC
Confidence 47788999999999999998 567999999998754
|
|
| >KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=97.13 E-value=0.00025 Score=76.57 Aligned_cols=198 Identities=18% Similarity=0.274 Sum_probs=106.8
Q ss_pred CcccceeecC--CCceEEEEEEe--c-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc---------------------
Q 042825 419 NFSEENRLGR--GGVGTVYKGEL--K-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK--------------------- 472 (631)
Q Consensus 419 ~f~~~~~iG~--G~fg~Vyk~~~--~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~--------------------- 472 (631)
.|.....+|. |.+|.||++.. . ++..+|+|+=+..........+-.+|+....+
T Consensus 115 ~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~~lf 194 (524)
T KOG0601|consen 115 RFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGSGILF 194 (524)
T ss_pred hcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcccccCCcce
Confidence 3556688999 99999999987 3 58889999733211111111111222211111
Q ss_pred -------CChhHHhHh----------------hhhcCCCCCCHHHHHHHHHHhhcC---------CCcEEEeeccccccC
Q 042825 473 -------GTLGRHLFN----------------WEEEGLEPLEWNTRLNIALDVARG---------DDMRVADFGLVRLVP 520 (631)
Q Consensus 473 -------gsL~~~L~~----------------~~~~~~~~L~~~~~~~I~~~ia~g---------~~~kl~DFGla~~~~ 520 (631)
.++..+.+. +.......+.|.|.-.|..+.++. ...+++|||+...+.
T Consensus 195 iqtE~~~~sl~~~~~~~~~~~p~~~l~~~~~~~~~~~~~al~~~hs~~~~~~~~kp~~i~~~~~~~s~~~~df~~v~~i~ 274 (524)
T KOG0601|consen 195 IQTELCGESLQSYCHTPCNFLPDNLLWNSLRDWLSRDVTALSHLHSNNIVHDDLKPANIFTTSDWTSCKLTDFGLVSKIS 274 (524)
T ss_pred eeeccccchhHHhhhcccccCCchhhhhHHhhhhhcccccccccCCCcccccccchhheecccccceeecCCcceeEEcc
Confidence 222222221 111222245555555555444433 234688999988775
Q ss_pred CCCccc---cccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHh---HhhhcC
Q 042825 521 ENGKHS---ILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWF---QKMHKN 594 (631)
Q Consensus 521 ~~~~~~---~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~---~~~~~~ 594 (631)
+..-.. ......|...|++||.. ...++.+.|+|++|.+.+|..++-..+...... .-..+..|. +..-..
T Consensus 275 ~~~~~~~~~~~~r~~~~~~Y~~ke~~-~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~--~W~~~r~~~ip~e~~~~~ 351 (524)
T KOG0601|consen 275 DGNFSSVFKVSKRPEGDCIYAAKELL-NGLATFASDIFSLGEVILEAILGSHLPSVGKNS--SWSQLRQGYIPLEFCEGG 351 (524)
T ss_pred CCccccceeeeecCCCCceEeChhhh-ccccchHhhhcchhhhhHhhHhhcccccCCCCC--CccccccccCchhhhcCc
Confidence 432111 11223567789999987 456889999999999999999986665422100 001111111 011112
Q ss_pred ChhHHHHHHhhcCCChhhHHhHHHH
Q 042825 595 HDTFQMAIDKTIQLDEENLANVSTV 619 (631)
Q Consensus 595 ~~~l~~~id~~L~~d~~~r~~~~~v 619 (631)
+..+...+-.+++.++.-|.....+
T Consensus 352 s~~l~~~~~~~~d~~~~~~~~~q~~ 376 (524)
T KOG0601|consen 352 SSSLRSVTSQMLDEDPRLRLTAQIL 376 (524)
T ss_pred chhhhhHHHHhcCcchhhhhHHHHH
Confidence 3345567777776666656555443
|
|
| >PRK14879 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=96.85 E-value=0.0049 Score=59.83 Aligned_cols=48 Identities=15% Similarity=0.234 Sum_probs=34.2
Q ss_pred eeecCCCceEEEEEEecCCcEEEEEEEecCCCCH------HHHHHHHHHHHHHhc
Q 042825 424 NRLGRGGVGTVYKGELKDGTEVGVKRMELGSVTE------QGIAQFESEITVLTK 472 (631)
Q Consensus 424 ~~iG~G~fg~Vyk~~~~~g~~vAvK~l~~~~~~~------~~~~~~~~Ei~~l~~ 472 (631)
+.||+|++|.||+|+. .|..|+||+........ ....++.+|++++..
T Consensus 2 ~~l~~G~~~~vy~~~~-~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~ 55 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF-LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSR 55 (211)
T ss_pred cccccCceEEEEEEee-CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHH
Confidence 5799999999999987 67789999865432211 123457778777754
|
|
| >PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated | Back alignment and domain information |
|---|
Probab=96.84 E-value=0.0034 Score=70.35 Aligned_cols=57 Identities=14% Similarity=0.203 Sum_probs=36.5
Q ss_pred hhcCCcccceeecCCCceEEEEEEecCCcEEEEEEEecCCCC------HHHHHHHHHHHHHHhc
Q 042825 415 NATNNFSEENRLGRGGVGTVYKGELKDGTEVGVKRMELGSVT------EQGIAQFESEITVLTK 472 (631)
Q Consensus 415 ~~t~~f~~~~~iG~G~fg~Vyk~~~~~g~~vAvK~l~~~~~~------~~~~~~~~~Ei~~l~~ 472 (631)
.....|...+.||+|+||+||+|.+.+. .+++|+....... ....+++.+|++++.+
T Consensus 330 ~~~~~~~~~~~iG~G~~g~Vy~~~~~~~-~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~ 392 (535)
T PRK09605 330 EVKRRKIPDHLIGKGAEADIKKGEYLGR-DAVIKERVPKGYRHPELDERLRTERTRAEARLLSE 392 (535)
T ss_pred ccccccCccceeccCCcEEEEEEeecCc-cceeEEEecccccchhHHHHHHHHHHHHHHHHHHh
Confidence 3445566789999999999999987644 3444433221111 1123568889888876
|
|
| >KOG1644 consensus U2-associated snRNP A' protein [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=96.76 E-value=0.0017 Score=60.90 Aligned_cols=59 Identities=27% Similarity=0.293 Sum_probs=28.4
Q ss_pred CCCCcEEEccCCcccccCCCCCCCCccCcCCCCCCCEEEeecCcCcccCCh---hhccCCCCCCEEEcc
Q 042825 167 FPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPV---SSFNNHPKLTTLNLT 232 (631)
Q Consensus 167 l~~L~~L~Ls~N~l~g~iP~~~~~~~~~~~~l~~L~~L~L~~N~l~g~iP~---~~~~~l~~L~~L~ls 232 (631)
+++|..|.|.+|++. .+-.-- .+..|++|++|.+-+|..+ .-+. -.+..+++|++||++
T Consensus 87 ~p~l~~L~LtnNsi~-~l~dl~-----pLa~~p~L~~Ltll~Npv~-~k~~YR~yvl~klp~l~~LDF~ 148 (233)
T KOG1644|consen 87 LPNLKTLILTNNSIQ-ELGDLD-----PLASCPKLEYLTLLGNPVE-HKKNYRLYVLYKLPSLRTLDFQ 148 (233)
T ss_pred ccccceEEecCcchh-hhhhcc-----hhccCCccceeeecCCchh-cccCceeEEEEecCcceEeehh
Confidence 455666666666665 222111 1345566666666666554 2110 123445555555554
|
|
| >KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=96.70 E-value=0.00015 Score=73.17 Aligned_cols=126 Identities=20% Similarity=0.292 Sum_probs=70.9
Q ss_pred CCeEEEEeCCCCCcccCcc----hhcCCccCceeecccCcccCCCC-cCcc-cccccccccccceecCCCCCCcCCCCCC
Q 042825 97 GQVTNIELQDQNRKGTVPP----ILKKLSSMAVMYLENNQLRGPIP-SLVG-SLEFFSAYEANISGTIPDFIGTDTFPQL 170 (631)
Q Consensus 97 ~~l~~l~l~~n~l~g~ip~----~~~~l~~L~~L~L~~N~l~g~lP-~~~~-~L~~L~l~~n~l~g~ip~~~~~~~l~~L 170 (631)
++++.||||+|.+.-.-++ -+..+..|++|+|.||.+. ..- ..++ .|..|. .|... + .-++|
T Consensus 92 ~~L~~ldLSDNA~G~~g~~~l~~ll~s~~~L~eL~L~N~Glg-~~ag~~l~~al~~l~--~~kk~-------~--~~~~L 159 (382)
T KOG1909|consen 92 PKLQKLDLSDNAFGPKGIRGLEELLSSCTDLEELYLNNCGLG-PEAGGRLGRALFELA--VNKKA-------A--SKPKL 159 (382)
T ss_pred CceeEeeccccccCccchHHHHHHHHhccCHHHHhhhcCCCC-hhHHHHHHHHHHHHH--HHhcc-------C--CCcce
Confidence 3777888888877644333 3456677777777777764 111 1111 222222 22211 1 33578
Q ss_pred cEEEccCCcccccCCCCCCCCccCcCCCCCCCEEEeecCcCcc--c-CChhhccCCCCCCEEEccCCCCc
Q 042825 171 SYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTG--I-FPVSSFNNHPKLTTLNLTNNLLQ 237 (631)
Q Consensus 171 ~~L~Ls~N~l~g~iP~~~~~~~~~~~~l~~L~~L~L~~N~l~g--~-iP~~~~~~l~~L~~L~ls~N~l~ 237 (631)
+.++.++|++. .-+...- -..+..++.|+.+.++.|.+.- . +=...|..+++|+.|||..|-|+
T Consensus 160 rv~i~~rNrle-n~ga~~~--A~~~~~~~~leevr~~qN~I~~eG~~al~eal~~~~~LevLdl~DNtft 226 (382)
T KOG1909|consen 160 RVFICGRNRLE-NGGATAL--AEAFQSHPTLEEVRLSQNGIRPEGVTALAEALEHCPHLEVLDLRDNTFT 226 (382)
T ss_pred EEEEeeccccc-cccHHHH--HHHHHhccccceEEEecccccCchhHHHHHHHHhCCcceeeecccchhh
Confidence 88888888876 3332210 0014456778888888887641 0 00112567788888888888775
|
|
| >TIGR03724 arch_bud32 Kae1-associated kinase Bud32 | Back alignment and domain information |
|---|
Probab=96.66 E-value=0.0022 Score=61.71 Aligned_cols=47 Identities=17% Similarity=0.265 Sum_probs=33.2
Q ss_pred eecCCCceEEEEEEecCCcEEEEEEEecCCCCH------HHHHHHHHHHHHHhc
Q 042825 425 RLGRGGVGTVYKGELKDGTEVGVKRMELGSVTE------QGIAQFESEITVLTK 472 (631)
Q Consensus 425 ~iG~G~fg~Vyk~~~~~g~~vAvK~l~~~~~~~------~~~~~~~~Ei~~l~~ 472 (631)
.||+|+||.||+|.+ +|..|++|+........ ....++.+|++++..
T Consensus 1 ~ig~G~~~~vy~~~~-~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~ 53 (199)
T TIGR03724 1 LIAKGAEAIIYLGDF-LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSR 53 (199)
T ss_pred CCCCCceEEEEEeec-CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHH
Confidence 489999999999996 57889999865432111 123567788877765
|
Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine. |
| >KOG2739 consensus Leucine-rich acidic nuclear protein [Cell cycle control, cell division, chromosome partitioning; General function prediction only] | Back alignment and domain information |
|---|
Probab=96.54 E-value=0.0013 Score=64.15 Aligned_cols=63 Identities=24% Similarity=0.382 Sum_probs=29.2
Q ss_pred CCCCCcEEEccCC--cccccCCCCCCCCccCcCCCCCCCEEEeecCcCcc--cCChhhccCCCCCCEEEccCCCCc
Q 042825 166 TFPQLSYLDLGNN--NLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTG--IFPVSSFNNHPKLTTLNLTNNLLQ 237 (631)
Q Consensus 166 ~l~~L~~L~Ls~N--~l~g~iP~~~~~~~~~~~~l~~L~~L~L~~N~l~g--~iP~~~~~~l~~L~~L~ls~N~l~ 237 (631)
.|++|+.|++|.| +.++.++... -++++|++|+|+.|++.- ++++ +..+.+|..|++.+|.-+
T Consensus 63 ~Lp~LkkL~lsdn~~~~~~~l~vl~-------e~~P~l~~l~ls~Nki~~lstl~p--l~~l~nL~~Ldl~n~~~~ 129 (260)
T KOG2739|consen 63 KLPKLKKLELSDNYRRVSGGLEVLA-------EKAPNLKVLNLSGNKIKDLSTLRP--LKELENLKSLDLFNCSVT 129 (260)
T ss_pred CcchhhhhcccCCcccccccceehh-------hhCCceeEEeecCCccccccccch--hhhhcchhhhhcccCCcc
Confidence 3455555555555 3333333221 134555555555555541 1221 234445555555555443
|
|
| >KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only] | Back alignment and domain information |
|---|
Probab=96.43 E-value=0.0015 Score=74.99 Aligned_cols=87 Identities=22% Similarity=0.337 Sum_probs=68.6
Q ss_pred ccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHH----HHHhHhhhcCChhHHHHHHhh
Q 042825 530 KVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHL----ATWFQKMHKNHDTFQMAIDKT 605 (631)
Q Consensus 530 ~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l----~~~~~~~~~~~~~l~~~id~~ 605 (631)
...||+.|.+||...+......+|+|++|+.++|.++|..||......... .++ ..|.......+.+.++++.+.
T Consensus 994 ~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp~na~tpq~~f-~ni~~~~~~~p~g~~~~s~~aq~~~~~l 1072 (1205)
T KOG0606|consen 994 AVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIPPFNAETPQQIF-ENILNRDIPWPEGPEEGSYEAQDLINRL 1072 (1205)
T ss_pred cccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCCCCCCcchhhhh-hccccCCCCCCCCccccChhhhhhhhhh
Confidence 357999999999999999999999999999999999999999876544322 222 235555555567889999999
Q ss_pred cCCChhhHHhHH
Q 042825 606 IQLDEENLANVS 617 (631)
Q Consensus 606 L~~d~~~r~~~~ 617 (631)
+..++.+|..+.
T Consensus 1073 l~~~~~qr~~a~ 1084 (1205)
T KOG0606|consen 1073 LTEEPTQRLGAK 1084 (1205)
T ss_pred hccCchhccCcc
Confidence 888888887665
|
|
| >KOG2982 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=96.37 E-value=0.00034 Score=69.12 Aligned_cols=81 Identities=20% Similarity=0.356 Sum_probs=45.9
Q ss_pred CeEEEEeCCCCCcc--cCcchhcCCccCceeecccCcccCC---CCcCcccccccccccccceecC-CCCCCcCCCCCCc
Q 042825 98 QVTNIELQDQNRKG--TVPPILKKLSSMAVMYLENNQLRGP---IPSLVGSLEFFSAYEANISGTI-PDFIGTDTFPQLS 171 (631)
Q Consensus 98 ~l~~l~l~~n~l~g--~ip~~~~~l~~L~~L~L~~N~l~g~---lP~~~~~L~~L~l~~n~l~g~i-p~~~~~~~l~~L~ 171 (631)
+|..+||..|.++. .|-.-+-+|+.|++|+|+.|+|... +|.-..+|+.|-|.+..+.=.- -..+. .+|.++
T Consensus 72 ~v~elDL~~N~iSdWseI~~ile~lP~l~~LNls~N~L~s~I~~lp~p~~nl~~lVLNgT~L~w~~~~s~l~--~lP~vt 149 (418)
T KOG2982|consen 72 DVKELDLTGNLISDWSEIGAILEQLPALTTLNLSCNSLSSDIKSLPLPLKNLRVLVLNGTGLSWTQSTSSLD--DLPKVT 149 (418)
T ss_pred hhhhhhcccchhccHHHHHHHHhcCccceEeeccCCcCCCccccCcccccceEEEEEcCCCCChhhhhhhhh--cchhhh
Confidence 56677777777662 3444455677777777777777643 3322336666666555443221 12222 566666
Q ss_pred EEEccCCcc
Q 042825 172 YLDLGNNNL 180 (631)
Q Consensus 172 ~L~Ls~N~l 180 (631)
.|.+|.|++
T Consensus 150 elHmS~N~~ 158 (418)
T KOG2982|consen 150 ELHMSDNSL 158 (418)
T ss_pred hhhhccchh
Confidence 777776644
|
|
| >KOG1644 consensus U2-associated snRNP A' protein [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=96.29 E-value=0.0044 Score=58.27 Aligned_cols=108 Identities=20% Similarity=0.296 Sum_probs=74.8
Q ss_pred CeEEEEeCCCCCcccCcchhcCCccCceeecccCcccCCCCc---CcccccccccccccceecCCCCCCcCCCCCCcEEE
Q 042825 98 QVTNIELQDQNRKGTVPPILKKLSSMAVMYLENNQLRGPIPS---LVGSLEFFSAYEANISGTIPDFIGTDTFPQLSYLD 174 (631)
Q Consensus 98 ~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~L~~N~l~g~lP~---~~~~L~~L~l~~n~l~g~ip~~~~~~~l~~L~~L~ 174 (631)
+...+||++|.+. .++ .|..+..|.+|.|++|.|+..-|. .+.+|+.|.|.+|++. .+-+--....+|+|++|.
T Consensus 43 ~~d~iDLtdNdl~-~l~-~lp~l~rL~tLll~nNrIt~I~p~L~~~~p~l~~L~LtnNsi~-~l~dl~pLa~~p~L~~Lt 119 (233)
T KOG1644|consen 43 QFDAIDLTDNDLR-KLD-NLPHLPRLHTLLLNNNRITRIDPDLDTFLPNLKTLILTNNSIQ-ELGDLDPLASCPKLEYLT 119 (233)
T ss_pred ccceecccccchh-hcc-cCCCccccceEEecCCcceeeccchhhhccccceEEecCcchh-hhhhcchhccCCccceee
Confidence 4578999999987 232 366788999999999999943332 2337999999999875 222111112689999999
Q ss_pred ccCCcccccCCCCCCCCccCcCCCCCCCEEEeecCcCc
Q 042825 175 LGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLT 212 (631)
Q Consensus 175 Ls~N~l~g~iP~~~~~~~~~~~~l~~L~~L~L~~N~l~ 212 (631)
+-+|..+ .-...= .--+..+++|++||.+.=...
T Consensus 120 ll~Npv~-~k~~YR---~yvl~klp~l~~LDF~kVt~~ 153 (233)
T KOG1644|consen 120 LLGNPVE-HKKNYR---LYVLYKLPSLRTLDFQKVTRK 153 (233)
T ss_pred ecCCchh-cccCce---eEEEEecCcceEeehhhhhHH
Confidence 9999887 443210 001457899999998765544
|
|
| >KOG2982 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=96.18 E-value=0.0035 Score=62.19 Aligned_cols=150 Identities=19% Similarity=0.244 Sum_probs=77.8
Q ss_pred eeCCCCCeEEEEeCCCCCcccCcchhcCCccCceeecccCcccC----CCCcCcccccccccccccceecCCC-----CC
Q 042825 92 ICSDDGQVTNIELQDQNRKGTVPPILKKLSSMAVMYLENNQLRG----PIPSLVGSLEFFSAYEANISGTIPD-----FI 162 (631)
Q Consensus 92 ~C~~~~~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~L~~N~l~g----~lP~~~~~L~~L~l~~n~l~g~ip~-----~~ 162 (631)
.|....+++.|+|+.|.|...|-..-..+.+|++|-|.+..|.= ..-+.+..++.|.++.|++....-+ .+
T Consensus 92 ile~lP~l~~LNls~N~L~s~I~~lp~p~~nl~~lVLNgT~L~w~~~~s~l~~lP~vtelHmS~N~~rq~n~Dd~c~e~~ 171 (418)
T KOG2982|consen 92 ILEQLPALTTLNLSCNSLSSDIKSLPLPLKNLRVLVLNGTGLSWTQSTSSLDDLPKVTELHMSDNSLRQLNLDDNCIEDW 171 (418)
T ss_pred HHhcCccceEeeccCCcCCCccccCcccccceEEEEEcCCCCChhhhhhhhhcchhhhhhhhccchhhhhcccccccccc
Confidence 34567899999999999985554332567788999888877742 1112233567788887744311100 01
Q ss_pred C-----cCCCCCCcEEEccCCcccccCCCCCC-----CCc------cCcCCCCCCCEEEeecCcCcccCChhhccCCCCC
Q 042825 163 G-----TDTFPQLSYLDLGNNNLQGTIPSSFG-----MPF------ADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKL 226 (631)
Q Consensus 163 ~-----~~~l~~L~~L~Ls~N~l~g~iP~~~~-----~~~------~~~~~l~~L~~L~L~~N~l~g~iP~~~~~~l~~L 226 (631)
. -..++.+..+.++-|++.--+|.-=. .++ .....++.+.-|+|+.|++..--.-..+..+++|
T Consensus 172 s~~v~tlh~~~c~~~~w~~~~~l~r~Fpnv~sv~v~e~PlK~~s~ek~se~~p~~~~LnL~~~~idswasvD~Ln~f~~l 251 (418)
T KOG2982|consen 172 STEVLTLHQLPCLEQLWLNKNKLSRIFPNVNSVFVCEGPLKTESSEKGSEPFPSLSCLNLGANNIDSWASVDALNGFPQL 251 (418)
T ss_pred chhhhhhhcCCcHHHHHHHHHhHHhhcccchheeeecCcccchhhcccCCCCCcchhhhhcccccccHHHHHHHcCCchh
Confidence 0 00123344444555555533332100 000 0122344555566666666522111224556666
Q ss_pred CEEEccCCCCcccCC
Q 042825 227 TTLNLTNNLLQGPTP 241 (631)
Q Consensus 227 ~~L~ls~N~l~g~~p 241 (631)
..|.+++|.|..++-
T Consensus 252 ~dlRv~~~Pl~d~l~ 266 (418)
T KOG2982|consen 252 VDLRVSENPLSDPLR 266 (418)
T ss_pred heeeccCCccccccc
Confidence 666666666555443
|
|
| >TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase | Back alignment and domain information |
|---|
Probab=96.17 E-value=0.014 Score=63.57 Aligned_cols=34 Identities=35% Similarity=0.570 Sum_probs=29.4
Q ss_pred CcccceeecCCCceEEEEEEecCCcEEEEEEEecC
Q 042825 419 NFSEENRLGRGGVGTVYKGELKDGTEVGVKRMELG 453 (631)
Q Consensus 419 ~f~~~~~iG~G~fg~Vyk~~~~~g~~vAvK~l~~~ 453 (631)
.|+ .+.||.|++|.||+|++++|+.||||+.+..
T Consensus 119 ~fd-~~plasaSigQVh~A~l~~G~~VaVKv~rp~ 152 (437)
T TIGR01982 119 EFE-EKPLAAASIAQVHRARLVDGKEVAVKVLRPG 152 (437)
T ss_pred hCC-CcceeeeehhheEEEEecCCCEEEEEeeCCC
Confidence 444 3689999999999999999999999998654
|
This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species. |
| >KOG2739 consensus Leucine-rich acidic nuclear protein [Cell cycle control, cell division, chromosome partitioning; General function prediction only] | Back alignment and domain information |
|---|
Probab=96.11 E-value=0.0041 Score=60.82 Aligned_cols=62 Identities=23% Similarity=0.340 Sum_probs=31.4
Q ss_pred cccccccccc--cceecCCCCCCcCCCCCCcEEEccCCcccccCCCCCCCCccCcCCCCCCCEEEeecCcCc
Q 042825 143 SLEFFSAYEA--NISGTIPDFIGTDTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLT 212 (631)
Q Consensus 143 ~L~~L~l~~n--~l~g~ip~~~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~~~~~~~~l~~L~~L~L~~N~l~ 212 (631)
+|+.|.++.| +.++.++...- .+|+|++|+||.|++. ++.++ +.+..+.+|..|++.+|.-+
T Consensus 66 ~LkkL~lsdn~~~~~~~l~vl~e--~~P~l~~l~ls~Nki~--~lstl----~pl~~l~nL~~Ldl~n~~~~ 129 (260)
T KOG2739|consen 66 KLKKLELSDNYRRVSGGLEVLAE--KAPNLKVLNLSGNKIK--DLSTL----RPLKELENLKSLDLFNCSVT 129 (260)
T ss_pred hhhhhcccCCcccccccceehhh--hCCceeEEeecCCccc--ccccc----chhhhhcchhhhhcccCCcc
Confidence 5666666666 33444433333 3466666666666664 23222 12344555556666655544
|
|
| >KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=95.92 E-value=0.0025 Score=64.60 Aligned_cols=162 Identities=17% Similarity=0.223 Sum_probs=103.5
Q ss_pred CCeEEEEeCCCCCcc----cCcchhcCCccCceeecccCcccC----CCCcCc----------ccccccccccccceecC
Q 042825 97 GQVTNIELQDQNRKG----TVPPILKKLSSMAVMYLENNQLRG----PIPSLV----------GSLEFFSAYEANISGTI 158 (631)
Q Consensus 97 ~~l~~l~l~~n~l~g----~ip~~~~~l~~L~~L~L~~N~l~g----~lP~~~----------~~L~~L~l~~n~l~g~i 158 (631)
..++.|+|++|.+.- .+...+.+.++|+..++++ .++| .+|+.+ ++|+.|+||+|-|.-.-
T Consensus 30 ~s~~~l~lsgnt~G~EAa~~i~~~L~~~~~L~~v~~sd-~ftGR~~~Ei~e~L~~l~~aL~~~~~L~~ldLSDNA~G~~g 108 (382)
T KOG1909|consen 30 DSLTKLDLSGNTFGTEAARAIAKVLASKKELREVNLSD-MFTGRLKDEIPEALKMLSKALLGCPKLQKLDLSDNAFGPKG 108 (382)
T ss_pred CceEEEeccCCchhHHHHHHHHHHHhhcccceeeehHh-hhcCCcHHHHHHHHHHHHHHHhcCCceeEeeccccccCccc
Confidence 467889999988863 3556677778888888774 4455 344432 27889999999886443
Q ss_pred CCCCCc--CCCCCCcEEEccCCcccccCCCC-CCC------CccCcCCCCCCCEEEeecCcCcccCCh----hhccCCCC
Q 042825 159 PDFIGT--DTFPQLSYLDLGNNNLQGTIPSS-FGM------PFADISNLSTLEDLSLGHNKLTGIFPV----SSFNNHPK 225 (631)
Q Consensus 159 p~~~~~--~~l~~L~~L~Ls~N~l~g~iP~~-~~~------~~~~~~~l~~L~~L~L~~N~l~g~iP~----~~~~~l~~ 225 (631)
+..++. .++..|++|.|.+|.+. ..-.. ++. --..+++-+.|+++..++|++- .-+. ..|...+.
T Consensus 109 ~~~l~~ll~s~~~L~eL~L~N~Glg-~~ag~~l~~al~~l~~~kk~~~~~~Lrv~i~~rNrle-n~ga~~~A~~~~~~~~ 186 (382)
T KOG1909|consen 109 IRGLEELLSSCTDLEELYLNNCGLG-PEAGGRLGRALFELAVNKKAASKPKLRVFICGRNRLE-NGGATALAEAFQSHPT 186 (382)
T ss_pred hHHHHHHHHhccCHHHHhhhcCCCC-hhHHHHHHHHHHHHHHHhccCCCcceEEEEeeccccc-cccHHHHHHHHHhccc
Confidence 333220 15678999999998875 22111 010 0011346689999999999986 3332 23667789
Q ss_pred CCEEEccCCCCccc-CC----CCCCCCceEEeecCCCcccC
Q 042825 226 LTTLNLTNNLLQGP-TP----RFNNSKLTVDMRTGSNCFCL 261 (631)
Q Consensus 226 L~~L~ls~N~l~g~-~p----~~~~~~~~~~l~~~~n~~~~ 261 (631)
|+.+.++.|.+.-. +- .+..+.....|++..|.|+-
T Consensus 187 leevr~~qN~I~~eG~~al~eal~~~~~LevLdl~DNtft~ 227 (382)
T KOG1909|consen 187 LEEVRLSQNGIRPEGVTALAEALEHCPHLEVLDLRDNTFTL 227 (382)
T ss_pred cceEEEecccccCchhHHHHHHHHhCCcceeeecccchhhh
Confidence 99999999976421 10 12223334456778898864
|
|
| >PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed | Back alignment and domain information |
|---|
Probab=95.88 E-value=0.027 Score=62.44 Aligned_cols=36 Identities=31% Similarity=0.391 Sum_probs=31.3
Q ss_pred cCCcccceeecCCCceEEEEEEecC-CcEEEEEEEecC
Q 042825 417 TNNFSEENRLGRGGVGTVYKGELKD-GTEVGVKRMELG 453 (631)
Q Consensus 417 t~~f~~~~~iG~G~fg~Vyk~~~~~-g~~vAvK~l~~~ 453 (631)
...|+. +.||+|++|.||+|++++ |+.||||+.+..
T Consensus 119 F~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~ 155 (537)
T PRK04750 119 FDDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPD 155 (537)
T ss_pred HHhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcc
Confidence 445776 789999999999999987 999999999754
|
|
| >KOG3665 consensus ZYG-1-like serine/threonine protein kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.09 E-value=0.0071 Score=69.08 Aligned_cols=132 Identities=16% Similarity=0.205 Sum_probs=80.8
Q ss_pred CCeEEEEeCCCCCcc-cCcchhc-CCccCceeecccCcccC----CCCcCcccccccccccccceecCCCCCCcCCCCCC
Q 042825 97 GQVTNIELQDQNRKG-TVPPILK-KLSSMAVMYLENNQLRG----PIPSLVGSLEFFSAYEANISGTIPDFIGTDTFPQL 170 (631)
Q Consensus 97 ~~l~~l~l~~n~l~g-~ip~~~~-~l~~L~~L~L~~N~l~g----~lP~~~~~L~~L~l~~n~l~g~ip~~~~~~~l~~L 170 (631)
.++++|++++...-. .-|..++ -|++|+.|.+.+=.|.. .+-..|.+|..||+|+.+++- + ..++ .|++|
T Consensus 122 ~nL~~LdI~G~~~~s~~W~~kig~~LPsL~sL~i~~~~~~~~dF~~lc~sFpNL~sLDIS~TnI~n-l-~GIS--~LknL 197 (699)
T KOG3665|consen 122 QNLQHLDISGSELFSNGWPKKIGTMLPSLRSLVISGRQFDNDDFSQLCASFPNLRSLDISGTNISN-L-SGIS--RLKNL 197 (699)
T ss_pred HhhhhcCccccchhhccHHHHHhhhCcccceEEecCceecchhHHHHhhccCccceeecCCCCccC-c-HHHh--ccccH
Confidence 367778877755431 1223344 46788888887766643 233455678888888877662 2 2233 67777
Q ss_pred cEEEccCCcccccCCCCCCCCccCcCCCCCCCEEEeecCcCcccCC---h---hhccCCCCCCEEEccCCCCccc
Q 042825 171 SYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFP---V---SSFNNHPKLTTLNLTNNLLQGP 239 (631)
Q Consensus 171 ~~L~Ls~N~l~g~iP~~~~~~~~~~~~l~~L~~L~L~~N~l~g~iP---~---~~~~~l~~L~~L~ls~N~l~g~ 239 (631)
+.|-+.+=.|. .-. .+.++.+|++|++||+|..+... -+ . +....+|+|+.||.|+..++..
T Consensus 198 q~L~mrnLe~e-~~~-----~l~~LF~L~~L~vLDIS~~~~~~-~~~ii~qYlec~~~LpeLrfLDcSgTdi~~~ 265 (699)
T KOG3665|consen 198 QVLSMRNLEFE-SYQ-----DLIDLFNLKKLRVLDISRDKNND-DTKIIEQYLECGMVLPELRFLDCSGTDINEE 265 (699)
T ss_pred HHHhccCCCCC-chh-----hHHHHhcccCCCeeecccccccc-chHHHHHHHHhcccCccccEEecCCcchhHH
Confidence 77766654444 111 11236688888899988887652 22 1 1124578888999888777654
|
|
| >cd05119 RIO RIO kinase family, catalytic domain | Back alignment and domain information |
|---|
Probab=95.05 E-value=0.038 Score=52.33 Aligned_cols=31 Identities=32% Similarity=0.410 Sum_probs=27.6
Q ss_pred ceeecCCCceEEEEEEecCCcEEEEEEEecC
Q 042825 423 ENRLGRGGVGTVYKGELKDGTEVGVKRMELG 453 (631)
Q Consensus 423 ~~~iG~G~fg~Vyk~~~~~g~~vAvK~l~~~ 453 (631)
.+.||+|+||+||+|...+|+.||||+++..
T Consensus 2 ~~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~ 32 (187)
T cd05119 2 GGPIGTGKEADVYLALDGDGEPVAVKIYRTG 32 (187)
T ss_pred CcccccccceeEEEEECCCCCEEEEEEEecC
Confidence 4679999999999999888999999998764
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct |
| >COG5238 RNA1 Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Signal transduction mechanisms / RNA processing and modification] | Back alignment and domain information |
|---|
Probab=94.91 E-value=0.0065 Score=59.56 Aligned_cols=98 Identities=18% Similarity=0.344 Sum_probs=55.8
Q ss_pred CeEEEEeCCCCCccc----CcchhcCCccCceeecccCcccCCCCcCcc-cccccccccccceecCCCCCCcCCCCCCcE
Q 042825 98 QVTNIELQDQNRKGT----VPPILKKLSSMAVMYLENNQLRGPIPSLVG-SLEFFSAYEANISGTIPDFIGTDTFPQLSY 172 (631)
Q Consensus 98 ~l~~l~l~~n~l~g~----ip~~~~~l~~L~~L~L~~N~l~g~lP~~~~-~L~~L~l~~n~l~g~ip~~~~~~~l~~L~~ 172 (631)
.++.++||+|.+... +...|.+-.+|+..+++.-. +|..-+.+. +|..| +|.-+ .||+|+.
T Consensus 31 ~~~evdLSGNtigtEA~e~l~~~ia~~~~L~vvnfsd~f-tgr~kde~~~~L~~L----------l~aLl---kcp~l~~ 96 (388)
T COG5238 31 ELVEVDLSGNTIGTEAMEELCNVIANVRNLRVVNFSDAF-TGRDKDELYSNLVML----------LKALL---KCPRLQK 96 (388)
T ss_pred ceeEEeccCCcccHHHHHHHHHHHhhhcceeEeehhhhh-hcccHHHHHHHHHHH----------HHHHh---cCCccee
Confidence 578888888888643 33345556677777776543 333222211 22221 12212 4677777
Q ss_pred EEccCCcccccCCCCCCCCccCcCCCCCCCEEEeecCcCc
Q 042825 173 LDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLT 212 (631)
Q Consensus 173 L~Ls~N~l~g~iP~~~~~~~~~~~~l~~L~~L~L~~N~l~ 212 (631)
.|||.|.|.-..|+.++ .-|++-+.|.+|.|++|.+-
T Consensus 97 v~LSDNAfg~~~~e~L~---d~is~~t~l~HL~l~NnGlG 133 (388)
T COG5238 97 VDLSDNAFGSEFPEELG---DLISSSTDLVHLKLNNNGLG 133 (388)
T ss_pred eeccccccCcccchHHH---HHHhcCCCceeEEeecCCCC
Confidence 77777777666665443 12556667777777777663
|
|
| >PF00560 LRR_1: Leucine Rich Repeat; InterPro: IPR001611 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape [] | Back alignment and domain information |
|---|
Probab=94.79 E-value=0.011 Score=34.96 Aligned_cols=17 Identities=71% Similarity=1.069 Sum_probs=9.3
Q ss_pred CcEEEccCCcccccCCCC
Q 042825 170 LSYLDLGNNNLQGTIPSS 187 (631)
Q Consensus 170 L~~L~Ls~N~l~g~iP~~ 187 (631)
|++|||++|+|+ .||++
T Consensus 2 L~~Ldls~n~l~-~ip~~ 18 (22)
T PF00560_consen 2 LEYLDLSGNNLT-SIPSS 18 (22)
T ss_dssp ESEEEETSSEES-EEGTT
T ss_pred ccEEECCCCcCE-eCChh
Confidence 555555555555 55544
|
LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions [, ].Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response []. Sequence analyses of LRR proteins suggested the existence of several different subfamilies of LRRs. The significance of this classification is that repeats from different subfamilies never occur simultaneously and have most probably evolved independently. It is, however, now clear that all major classes of LRR have curved horseshoe structures with a parallel beta sheet on the concave side and mostly helical elements on the convex side. At least six families of LRR proteins, characterised by different lengths and consensus sequences of the repeats, have been identified. Eleven-residue segments of the LRRs (LxxLxLxxN/CxL), corresponding to the beta-strand and adjacent loop regions, are conserved in LRR proteins, whereas the remaining parts of the repeats (herein termed variable) may be very different. Despite the differences, each of the variable parts contains two half-turns at both ends and a "linear" segment (as the chain follows a linear path overall), usually formed by a helix, in the middle. The concave face and the adjacent loops are the most common protein interaction surfaces on LRR proteins. 3D structure of some LRR proteins-ligand complexes show that the concave surface of LRR domain is ideal for interaction with alpha-helix, thus supporting earlier conclusions that the elongated and curved LRR structure provides an outstanding framework for achieving diverse protein-protein interactions []. Molecular modeling suggests that the conserved pattern LxxLxL, which is shorter than the previously proposed LxxLxLxxN/CxL is sufficient to impart the characteristic horseshoe curvature to proteins with 20- to 30-residue repeats []. ; GO: 0005515 protein binding; PDB: 4ECO_B 2A0Z_A 3ULU_A 1ZIW_A 3ULV_A 1DCE_C 1LTX_A 3J0A_B 3A79_B 4FCG_A .... |
| >PF00560 LRR_1: Leucine Rich Repeat; InterPro: IPR001611 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape [] | Back alignment and domain information |
|---|
Probab=94.58 E-value=0.015 Score=34.25 Aligned_cols=16 Identities=38% Similarity=0.600 Sum_probs=7.5
Q ss_pred CceeecccCcccCCCCc
Q 042825 123 MAVMYLENNQLRGPIPS 139 (631)
Q Consensus 123 L~~L~L~~N~l~g~lP~ 139 (631)
|++|||++|+|+ .+|+
T Consensus 2 L~~Ldls~n~l~-~ip~ 17 (22)
T PF00560_consen 2 LEYLDLSGNNLT-SIPS 17 (22)
T ss_dssp ESEEEETSSEES-EEGT
T ss_pred ccEEECCCCcCE-eCCh
Confidence 444444444444 4443
|
LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions [, ].Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response []. Sequence analyses of LRR proteins suggested the existence of several different subfamilies of LRRs. The significance of this classification is that repeats from different subfamilies never occur simultaneously and have most probably evolved independently. It is, however, now clear that all major classes of LRR have curved horseshoe structures with a parallel beta sheet on the concave side and mostly helical elements on the convex side. At least six families of LRR proteins, characterised by different lengths and consensus sequences of the repeats, have been identified. Eleven-residue segments of the LRRs (LxxLxLxxN/CxL), corresponding to the beta-strand and adjacent loop regions, are conserved in LRR proteins, whereas the remaining parts of the repeats (herein termed variable) may be very different. Despite the differences, each of the variable parts contains two half-turns at both ends and a "linear" segment (as the chain follows a linear path overall), usually formed by a helix, in the middle. The concave face and the adjacent loops are the most common protein interaction surfaces on LRR proteins. 3D structure of some LRR proteins-ligand complexes show that the concave surface of LRR domain is ideal for interaction with alpha-helix, thus supporting earlier conclusions that the elongated and curved LRR structure provides an outstanding framework for achieving diverse protein-protein interactions []. Molecular modeling suggests that the conserved pattern LxxLxL, which is shorter than the previously proposed LxxLxLxxN/CxL is sufficient to impart the characteristic horseshoe curvature to proteins with 20- to 30-residue repeats []. ; GO: 0005515 protein binding; PDB: 4ECO_B 2A0Z_A 3ULU_A 1ZIW_A 3ULV_A 1DCE_C 1LTX_A 3J0A_B 3A79_B 4FCG_A .... |
| >KOG3665 consensus ZYG-1-like serine/threonine protein kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=94.48 E-value=0.008 Score=68.67 Aligned_cols=107 Identities=20% Similarity=0.312 Sum_probs=72.6
Q ss_pred ccCceeecccCccc-CCCCcC----cccccccccccccceec-CCCCCCcCCCCCCcEEEccCCcccccCCCCCCCCccC
Q 042825 121 SSMAVMYLENNQLR-GPIPSL----VGSLEFFSAYEANISGT-IPDFIGTDTFPQLSYLDLGNNNLQGTIPSSFGMPFAD 194 (631)
Q Consensus 121 ~~L~~L~L~~N~l~-g~lP~~----~~~L~~L~l~~n~l~g~-ip~~~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~~~~~ 194 (631)
.+|++|++++.... ..-|.. +++|+.|.+.+-+|... +-.... ++|+|..||+|+.+++ .+ .|
T Consensus 122 ~nL~~LdI~G~~~~s~~W~~kig~~LPsL~sL~i~~~~~~~~dF~~lc~--sFpNL~sLDIS~TnI~-nl---~G----- 190 (699)
T KOG3665|consen 122 QNLQHLDISGSELFSNGWPKKIGTMLPSLRSLVISGRQFDNDDFSQLCA--SFPNLRSLDISGTNIS-NL---SG----- 190 (699)
T ss_pred HhhhhcCccccchhhccHHHHHhhhCcccceEEecCceecchhHHHHhh--ccCccceeecCCCCcc-Cc---HH-----
Confidence 46888888886532 223332 33788888887666432 111122 7899999999999988 54 22
Q ss_pred cCCCCCCCEEEeecCcCcccCChhhccCCCCCCEEEccCCCCcc
Q 042825 195 ISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNNLLQG 238 (631)
Q Consensus 195 ~~~l~~L~~L~L~~N~l~g~iP~~~~~~l~~L~~L~ls~N~l~g 238 (631)
+++|++|++|.+.+=.+.-.---.-+.+|++|+.||+|......
T Consensus 191 IS~LknLq~L~mrnLe~e~~~~l~~LF~L~~L~vLDIS~~~~~~ 234 (699)
T KOG3665|consen 191 ISRLKNLQVLSMRNLEFESYQDLIDLFNLKKLRVLDISRDKNND 234 (699)
T ss_pred HhccccHHHHhccCCCCCchhhHHHHhcccCCCeeecccccccc
Confidence 67999999999887776621111126689999999999887544
|
|
| >KOG2120 consensus SCF ubiquitin ligase, Skp2 component [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=94.45 E-value=0.00076 Score=66.74 Aligned_cols=142 Identities=17% Similarity=0.170 Sum_probs=83.1
Q ss_pred CCeEEEEeCCCCCc-ccCcchhcCCccCceeecccCcccCCCCcCcc---ccccccccccc-ceecCCCCCCcCCCCCCc
Q 042825 97 GQVTNIELQDQNRK-GTVPPILKKLSSMAVMYLENNQLRGPIPSLVG---SLEFFSAYEAN-ISGTIPDFIGTDTFPQLS 171 (631)
Q Consensus 97 ~~l~~l~l~~n~l~-g~ip~~~~~l~~L~~L~L~~N~l~g~lP~~~~---~L~~L~l~~n~-l~g~ip~~~~~~~l~~L~ 171 (631)
.||++|||++..++ .++-.-+..+++|+.|.|.+|+|...|-..+. +|+.|+++.++ |+. ....+-..+++.|.
T Consensus 185 sRlq~lDLS~s~it~stl~~iLs~C~kLk~lSlEg~~LdD~I~~~iAkN~~L~~lnlsm~sG~t~-n~~~ll~~scs~L~ 263 (419)
T KOG2120|consen 185 SRLQHLDLSNSVITVSTLHGILSQCSKLKNLSLEGLRLDDPIVNTIAKNSNLVRLNLSMCSGFTE-NALQLLLSSCSRLD 263 (419)
T ss_pred hhhHHhhcchhheeHHHHHHHHHHHHhhhhccccccccCcHHHHHHhccccceeeccccccccch-hHHHHHHHhhhhHh
Confidence 36888888888876 23445567788899999999998877666665 78888887653 331 11111112677888
Q ss_pred EEEccCCcccccCCCC----CC----C-------------CccC-cCCCCCCCEEEeecCc-CcccCChhhccCCCCCCE
Q 042825 172 YLDLGNNNLQGTIPSS----FG----M-------------PFAD-ISNLSTLEDLSLGHNK-LTGIFPVSSFNNHPKLTT 228 (631)
Q Consensus 172 ~L~Ls~N~l~g~iP~~----~~----~-------------~~~~-~~~l~~L~~L~L~~N~-l~g~iP~~~~~~l~~L~~ 228 (631)
.|+|+-+.++-+.-.. ++ . .+.. -.++++|..||||.|. ++...-. .|..++.|++
T Consensus 264 ~LNlsWc~l~~~~Vtv~V~hise~l~~LNlsG~rrnl~~sh~~tL~~rcp~l~~LDLSD~v~l~~~~~~-~~~kf~~L~~ 342 (419)
T KOG2120|consen 264 ELNLSWCFLFTEKVTVAVAHISETLTQLNLSGYRRNLQKSHLSTLVRRCPNLVHLDLSDSVMLKNDCFQ-EFFKFNYLQH 342 (419)
T ss_pred hcCchHhhccchhhhHHHhhhchhhhhhhhhhhHhhhhhhHHHHHHHhCCceeeeccccccccCchHHH-HHHhcchhee
Confidence 8888887765332110 00 0 0000 1346677777777664 3322211 2556666777
Q ss_pred EEccCCCCcccCCC
Q 042825 229 LNLTNNLLQGPTPR 242 (631)
Q Consensus 229 L~ls~N~l~g~~p~ 242 (631)
|.|+.+. +.+|.
T Consensus 343 lSlsRCY--~i~p~ 354 (419)
T KOG2120|consen 343 LSLSRCY--DIIPE 354 (419)
T ss_pred eehhhhc--CCChH
Confidence 7666553 34443
|
|
| >COG5238 RNA1 Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Signal transduction mechanisms / RNA processing and modification] | Back alignment and domain information |
|---|
Probab=94.31 E-value=0.021 Score=56.08 Aligned_cols=67 Identities=19% Similarity=0.287 Sum_probs=44.1
Q ss_pred CCCCCcEEEccCCcccccCCCCCCCCccCcCCCCCCCEEEeecCcCcccCChh-------hccCCCCCCEEEccCCCCcc
Q 042825 166 TFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVS-------SFNNHPKLTTLNLTNNLLQG 238 (631)
Q Consensus 166 ~l~~L~~L~Ls~N~l~g~iP~~~~~~~~~~~~l~~L~~L~L~~N~l~g~iP~~-------~~~~l~~L~~L~ls~N~l~g 238 (631)
+-|.|+..+...|+|. .-|.... ..-+..-..|+++.+..|.+. |.. -+..+.+|+.|||..|-|+-
T Consensus 155 ~kp~Le~vicgrNRle-ngs~~~~--a~~l~sh~~lk~vki~qNgIr---pegv~~L~~~gl~y~~~LevLDlqDNtft~ 228 (388)
T COG5238 155 DKPKLEVVICGRNRLE-NGSKELS--AALLESHENLKEVKIQQNGIR---PEGVTMLAFLGLFYSHSLEVLDLQDNTFTL 228 (388)
T ss_pred cCCCceEEEeccchhc-cCcHHHH--HHHHHhhcCceeEEeeecCcC---cchhHHHHHHHHHHhCcceeeeccccchhh
Confidence 4578999999999987 4443211 000223367888999999876 321 03456789999999998763
|
|
| >PF13504 LRR_7: Leucine rich repeat; PDB: 3OJA_B 3G06_A 1OOK_G 1QYY_G 1SQ0_B 1P9A_G 1GWB_A 1P8V_A 1M0Z_A 1U0N_D | Back alignment and domain information |
|---|
Probab=94.20 E-value=0.026 Score=30.95 Aligned_cols=13 Identities=54% Similarity=0.708 Sum_probs=5.3
Q ss_pred CCcEEEccCCccc
Q 042825 169 QLSYLDLGNNNLQ 181 (631)
Q Consensus 169 ~L~~L~Ls~N~l~ 181 (631)
+|+.|+|++|+|+
T Consensus 2 ~L~~L~l~~n~L~ 14 (17)
T PF13504_consen 2 NLRTLDLSNNRLT 14 (17)
T ss_dssp T-SEEEETSS--S
T ss_pred ccCEEECCCCCCC
Confidence 4555555555554
|
... |
| >KOG2120 consensus SCF ubiquitin ligase, Skp2 component [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=93.70 E-value=0.0036 Score=62.09 Aligned_cols=127 Identities=17% Similarity=0.212 Sum_probs=80.8
Q ss_pred CCeEEEEeCCC-CCcc-cCcchhcCCccCceeecccCcccCCCCc----Ccc-ccccccccccc--ceecCCCCCCcCCC
Q 042825 97 GQVTNIELQDQ-NRKG-TVPPILKKLSSMAVMYLENNQLRGPIPS----LVG-SLEFFSAYEAN--ISGTIPDFIGTDTF 167 (631)
Q Consensus 97 ~~l~~l~l~~n-~l~g-~ip~~~~~l~~L~~L~L~~N~l~g~lP~----~~~-~L~~L~l~~n~--l~g~ip~~~~~~~l 167 (631)
..++.|+|+.. +++. .+.--+.+++.|..|+|++..++...-. .++ +|+.|++++.. |...--+.+. ..+
T Consensus 234 ~~L~~lnlsm~sG~t~n~~~ll~~scs~L~~LNlsWc~l~~~~Vtv~V~hise~l~~LNlsG~rrnl~~sh~~tL~-~rc 312 (419)
T KOG2120|consen 234 SNLVRLNLSMCSGFTENALQLLLSSCSRLDELNLSWCFLFTEKVTVAVAHISETLTQLNLSGYRRNLQKSHLSTLV-RRC 312 (419)
T ss_pred ccceeeccccccccchhHHHHHHHhhhhHhhcCchHhhccchhhhHHHhhhchhhhhhhhhhhHhhhhhhHHHHHH-HhC
Confidence 46788888763 3432 1223477899999999999988754321 123 78999988763 2111001111 268
Q ss_pred CCCcEEEccCCcccccCCCCCCCCccCcCCCCCCCEEEeecCcCcccCChh--hccCCCCCCEEEcc
Q 042825 168 PQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVS--SFNNHPKLTTLNLT 232 (631)
Q Consensus 168 ~~L~~L~Ls~N~l~g~iP~~~~~~~~~~~~l~~L~~L~L~~N~l~g~iP~~--~~~~l~~L~~L~ls 232 (631)
++|..||||.|.-- -+.. +.+|.+++.|++|.|+.+.. .+|.. .+...++|.+||+-
T Consensus 313 p~l~~LDLSD~v~l---~~~~---~~~~~kf~~L~~lSlsRCY~--i~p~~~~~l~s~psl~yLdv~ 371 (419)
T KOG2120|consen 313 PNLVHLDLSDSVML---KNDC---FQEFFKFNYLQHLSLSRCYD--IIPETLLELNSKPSLVYLDVF 371 (419)
T ss_pred Cceeeecccccccc---CchH---HHHHHhcchheeeehhhhcC--CChHHeeeeccCcceEEEEec
Confidence 99999999987532 1111 12356889999999988874 35532 14677888888864
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 631 | ||||
| 3hgk_A | 327 | Crystal Structure Of Effect Protein Avrptob Complex | 7e-22 | ||
| 2qkw_B | 321 | Structural Basis For Activation Of Plant Immunity B | 4e-21 | ||
| 3tl8_A | 349 | The Avrptob-Bak1 Complex Reveals Two Structurally S | 5e-21 | ||
| 3uim_A | 326 | Structural Basis For The Impact Of Phosphorylation | 9e-20 | ||
| 2nry_A | 307 | Crystal Structure Of Irak-4 Length = 307 | 1e-17 | ||
| 2oib_A | 301 | Crystal Structure Of Irak4 Kinase Domain Apo Form L | 2e-17 | ||
| 2nru_A | 307 | Crystal Structure Of Irak-4 Length = 307 | 2e-17 | ||
| 2o8y_A | 298 | Apo Irak4 Kinase Domain Length = 298 | 3e-16 | ||
| 4f0f_A | 287 | Crystal Structure Of The Roco4 Kinase Domain Bound | 3e-08 | ||
| 4f1o_A | 287 | Crystal Structure Of The L1180t Mutant Roco4 Kinase | 1e-07 | ||
| 4f1m_A | 287 | Crystal Structure Of The G1179s Roco4 Kinase Domain | 1e-07 | ||
| 3d7u_B | 277 | Structural Basis For The Recognition Of C-Src By It | 5e-07 | ||
| 3geq_A | 286 | Structural Basis For The Chemical Rescue Of Src Kin | 6e-07 | ||
| 2hwo_A | 286 | Crystal Structure Of Src Kinase Domain In Complex W | 6e-07 | ||
| 3oez_A | 286 | Crystal Structure Of The L317i Mutant Of The Chicke | 6e-07 | ||
| 3u4w_A | 275 | Src In Complex With Dna-Templated Macrocyclic Inhib | 6e-07 | ||
| 2oiq_A | 286 | Crystal Structure Of Chicken C-Src Kinase Domain In | 7e-07 | ||
| 2h8h_A | 535 | Src Kinase In Complex With A Quinazoline Inhibitor | 1e-06 | ||
| 1y57_A | 452 | Structure Of Unphosphorylated C-Src In Complex With | 1e-06 | ||
| 1fmk_A | 452 | Crystal Structure Of Human Tyrosine-Protein Kinase | 1e-06 | ||
| 3c4c_A | 280 | B-Raf Kinase In Complex With Plx4720 Length = 280 | 1e-06 | ||
| 1yol_A | 283 | Crystal Structure Of Src Kinase Domain In Complex W | 2e-06 | ||
| 2ptk_A | 453 | Chicken Src Tyrosine Kinase Length = 453 | 2e-06 | ||
| 2bdf_A | 279 | Src Kinase In Complex With Inhibitor Ap23451 Length | 2e-06 | ||
| 3p86_A | 309 | Crystal Structure Of Ctr1 Kinase Domain Mutant D676 | 2e-06 | ||
| 2hk5_A | 270 | Hck Kinase In Complex With Lck Targetted Inhibitor | 2e-06 | ||
| 3svv_A | 286 | Crystal Structure Of T338c C-Src Covalently Bound T | 2e-06 | ||
| 3ppz_A | 309 | Crystal Structure Of Ctr1 Kinase Domain In Complex | 2e-06 | ||
| 2pl0_A | 289 | Lck Bound To Imatinib Length = 289 | 2e-06 | ||
| 2qq7_A | 286 | Crystal Structure Of Drug Resistant Src Kinase Doma | 2e-06 | ||
| 3g6h_A | 286 | Src Thr338ile Inhibited In The Dfg-Asp-Out Conforma | 2e-06 | ||
| 3bys_A | 277 | Co-Crystal Structure Of Lck And Aminopyrimidine Ami | 3e-06 | ||
| 2ofv_A | 277 | Crystal Structure Of Aminoquinazoline 1 Bound To Lc | 3e-06 | ||
| 1yi6_A | 276 | C-Term Tail Segment Of Human Tyrosine Kinase (258-5 | 3e-06 | ||
| 1qcf_A | 454 | Crystal Structure Of Hck In Complex With A Src Fami | 3e-06 | ||
| 1ksw_A | 452 | Structure Of Human C-Src Tyrosine Kinase (Thr338gly | 4e-06 | ||
| 2of2_A | 271 | Crystal Structure Of Furanopyrimidine 8 Bound To Lc | 4e-06 | ||
| 1yoj_A | 283 | Crystal Structure Of Src Kinase Domain Length = 283 | 4e-06 | ||
| 2og8_A | 265 | Crystal Structure Of Aminoquinazoline 36 Bound To L | 4e-06 | ||
| 3og7_A | 289 | B-Raf Kinase V600e Oncogenic Mutant In Complex With | 4e-06 | ||
| 4fk3_A | 292 | B-Raf Kinase V600e Oncogenic Mutant In Complex With | 5e-06 | ||
| 1qpd_A | 279 | Structural Analysis Of The Lymphocyte-specific Kina | 5e-06 | ||
| 2zm1_A | 285 | Crystal Structure Of Imidazo Pyrazin 1 Bound To The | 6e-06 | ||
| 3kmm_A | 288 | Structure Of Human Lck Kinase With A Small Molecule | 6e-06 | ||
| 3kxz_A | 287 | The Complex Crystal Structure Of Lck With A Probe M | 6e-06 | ||
| 3dqw_A | 286 | C-Src Kinase Domain Thr338ile Mutant In Complex Wit | 6e-06 | ||
| 1qpe_A | 279 | Structural Analysis Of The Lymphocyte-Specific Kina | 7e-06 | ||
| 2hog_A | 322 | Crystal Structure Of Chek1 In Complex With Inhibito | 8e-06 | ||
| 2ofu_A | 273 | X-Ray Crystal Structure Of 2-Aminopyrimidine Carbam | 8e-06 | ||
| 3mpm_A | 267 | Lck Complexed With A Pyrazolopyrimidine Length = 26 | 8e-06 | ||
| 2r0u_A | 323 | Crystal Structure Of Chek1 In Complex With Inhibito | 9e-06 | ||
| 4fsu_A | 279 | Crystal Structure Of The Chk1 Length = 279 | 9e-06 | ||
| 4fsm_A | 279 | Crystal Structure Of The Chk1 Length = 279 | 9e-06 | ||
| 2dq7_X | 283 | Crystal Structure Of Fyn Kinase Domain Complexed Wi | 9e-06 | ||
| 4fsn_A | 278 | Crystal Structure Of The Chk1 Length = 278 | 1e-05 | ||
| 3ot3_A | 273 | X-Ray Crystal Structure Of Compound 22k Bound To Hu | 1e-05 | ||
| 3jvr_A | 271 | Characterization Of The Chk1 Allosteric Inhibitor B | 1e-05 | ||
| 2e9v_A | 268 | Structure Of H-Chk1 Complexed With A859017 Length = | 1e-05 | ||
| 2ghg_A | 269 | H-Chk1 Complexed With A431994 Length = 269 | 1e-05 | ||
| 2ayp_A | 269 | Crystal Structure Of Chk1 With An Indol Inhibitor L | 1e-05 | ||
| 3bym_A | 272 | X-Ray Co-Crystal Structure Aminobenzimidazole Triaz | 1e-05 | ||
| 2x8e_A | 276 | Discovery Of A Novel Class Of Triazolones As Checkp | 1e-05 | ||
| 1zys_A | 273 | Co-Crystal Structure Of Checkpoint Kinase Chk1 With | 1e-05 | ||
| 2br1_A | 297 | Structure-Based Design Of Novel Chk1 Inhibitors: In | 1e-05 | ||
| 3lck_A | 271 | The Kinase Domain Of Human Lymphocyte Kinase (Lck), | 1e-05 | ||
| 1ia8_A | 289 | The 1.7 A Crystal Structure Of Human Cell Cycle Che | 1e-05 | ||
| 1zlt_A | 295 | Crystal Structure Of Chk1 Complexed With A Hymenald | 1e-05 | ||
| 4fsy_A | 279 | Crystal Structure Of The Chk1 Length = 279 | 1e-05 | ||
| 4fsw_A | 279 | Crystal Structure Of The Chk1 Length = 279 | 1e-05 | ||
| 4ft3_A | 279 | Crystal Structure Of The Chk1 Length = 279 | 1e-05 | ||
| 4fsz_A | 279 | Crystal Structure Of The Chk1 Length = 279 | 1e-05 | ||
| 4fst_A | 269 | Crystal Structure Of The Chk1 Length = 269 | 1e-05 | ||
| 2ydj_A | 276 | Discovery Of Checkpoint Kinase Inhibitor Azd7762 By | 1e-05 | ||
| 2zoq_A | 382 | Structural Dissection Of Human Mitogen-Activated Ki | 2e-05 | ||
| 3riz_A | 772 | Crystal Structure Of The Plant Steroid Receptor Bri | 3e-05 | ||
| 3rgx_A | 768 | Structural Insight Into Brassinosteroid Perception | 4e-05 | ||
| 3q96_A | 282 | B-Raf Kinase Domain In Complex With A Tetrahydronap | 4e-05 | ||
| 4dbn_A | 284 | Crystal Structure Of The Kinase Domain Of Human B-R | 4e-05 | ||
| 2fb8_A | 281 | Structure Of The B-Raf Kinase Domain Bound To Sb-59 | 4e-05 | ||
| 1uwh_A | 276 | The Complex Of Wild Type B-Raf And Bay439006 Length | 4e-05 | ||
| 4h58_A | 275 | Braf In Complex With Compound 3 Length = 275 | 5e-05 | ||
| 3ii5_A | 306 | The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimi | 6e-05 | ||
| 3a4o_X | 286 | Lyn Kinase Domain Length = 286 | 6e-05 | ||
| 3d4q_A | 307 | Pyrazole-Based Inhibitors Of B-Raf Kinase Length = | 6e-05 | ||
| 3f69_A | 311 | Crystal Structure Of The Mycobacterium Tuberculosis | 8e-05 | ||
| 1ogq_A | 313 | The Crystal Structure Of Pgip (Polygalacturonase In | 8e-05 | ||
| 3f61_A | 311 | Crystal Structure Of M. Tuberculosis Pknb Leu33aspV | 8e-05 | ||
| 3ori_A | 311 | Mycobacterium Tuberculosis Pknb Kinase Domain L33d | 9e-05 | ||
| 1mru_A | 311 | Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycob | 9e-05 | ||
| 3orm_A | 311 | Mycobacterium Tuberculosis Pknb Kinase Domain D76a | 9e-05 | ||
| 3uiu_A | 306 | Crystal Structure Of Apo-Pkr Kinase Domain Length = | 1e-04 | ||
| 1o6y_A | 299 | Catalytic Domain Of Pknb Kinase From Mycobacterium | 1e-04 | ||
| 1uwj_A | 276 | The Complex Of Mutant V599e B-raf And Bay439006 Len | 1e-04 | ||
| 1ad5_A | 438 | Src Family Kinase Hck-Amp-Pnp Complex Length = 438 | 1e-04 | ||
| 3idp_A | 300 | B-Raf V600e Kinase Domain In Complex With An Aminoi | 2e-04 | ||
| 4g9r_A | 307 | B-Raf V600e Kinase Domain Bound To A Type Ii Dihydr | 2e-04 | ||
| 4ewh_B | 275 | Co-Crystal Structure Of Ack1 With Inhibitor Length | 3e-04 | ||
| 4hzs_A | 341 | Crystal Structure Of Ack1 Kinase Domain With C-term | 3e-04 | ||
| 1u54_A | 291 | Crystal Structures Of The Phosphorylated And Unphos | 3e-04 | ||
| 3dtc_A | 271 | Crystal Structure Of Mixed-Lineage Kinase Mlk1 Comp | 3e-04 | ||
| 3nyn_A | 576 | Crystal Structure Of G Protein-Coupled Receptor Kin | 4e-04 | ||
| 4hzr_A | 277 | Crystal Structure Of Ack1 Kinase Domain Length = 27 | 4e-04 | ||
| 2acx_A | 576 | Crystal Structure Of G Protein Coupled Receptor Kin | 4e-04 | ||
| 3eqp_B | 276 | Crystal Structure Of Ack1 With Compound T95 Length | 4e-04 | ||
| 4id7_A | 273 | Ack1 Kinase In Complex With The Inhibitor Cis-3-[8- | 4e-04 | ||
| 1u46_A | 291 | Crystal Structure Of The Unphosphorylated Kinase Do | 4e-04 | ||
| 2a19_B | 284 | Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex. Leng | 5e-04 | ||
| 2zv7_A | 279 | Lyn Tyrosine Kinase Domain, Apo Form Length = 279 | 6e-04 | ||
| 3q6u_A | 308 | Structure Of The Apo Met Receptor Kinase In The Dua | 6e-04 | ||
| 2g15_A | 318 | Structural Characterization Of Autoinhibited C-Met | 6e-04 | ||
| 1fot_A | 318 | Structure Of The Unliganded Camp-Dependent Protein | 6e-04 | ||
| 2wd1_A | 292 | Human C-Met Kinase In Complex With Azaindole Inhibi | 6e-04 | ||
| 4gg5_A | 319 | Crystal Structure Of Cmet In Complex With Novel Inh | 7e-04 | ||
| 3lq8_A | 302 | Structure Of The Kinase Domain Of C-Met Bound To Xl | 7e-04 | ||
| 2wgj_A | 306 | X-Ray Structure Of Pf-02341066 Bound To The Kinase | 7e-04 | ||
| 3i5n_A | 309 | Crystal Structure Of C-Met With Triazolopyridazine | 7e-04 | ||
| 2rfn_A | 310 | X-ray Structure Of C-met With Inhibitor. Length = 3 | 7e-04 | ||
| 3f66_A | 298 | Human C-Met Kinase In Complex With Quinoxaline Inhi | 7e-04 | ||
| 2wei_A | 287 | Crystal Structure Of The Kinase Domain Of Cryptospo | 8e-04 | ||
| 3dfa_A | 286 | Crystal Structure Of Kinase Domain Of Calcium-depen | 8e-04 |
| >pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With Kinase Pto Length = 327 | Back alignment and structure |
|
| >pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By Bacterial Effector Protein Avrpto Length = 321 | Back alignment and structure |
|
| >pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector Length = 349 | Back alignment and structure |
|
| >pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On Plant Receptor- Like Kinase Bak1 Activation Length = 326 | Back alignment and structure |
|
| >pdb|2NRY|A Chain A, Crystal Structure Of Irak-4 Length = 307 | Back alignment and structure |
|
| >pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form Length = 301 | Back alignment and structure |
|
| >pdb|2NRU|A Chain A, Crystal Structure Of Irak-4 Length = 307 | Back alignment and structure |
|
| >pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain Length = 298 | Back alignment and structure |
|
| >pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287 | Back alignment and structure |
|
| >pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain From D. Discoideum Bound To Appcp Length = 287 | Back alignment and structure |
|
| >pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287 | Back alignment and structure |
|
| >pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 277 | Back alignment and structure |
|
| >pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase Activity Length = 286 | Back alignment and structure |
|
| >pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Covalent Inhibitor Length = 286 | Back alignment and structure |
|
| >pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src Tyrosine Kinase Domain Complexed With Imatinib Length = 286 | Back alignment and structure |
|
| >pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor Mc4b Length = 275 | Back alignment and structure |
|
| >pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In Complex With The Cancer Drug Imatinib. Length = 286 | Back alignment and structure |
|
| >pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor Length = 535 | Back alignment and structure |
|
| >pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An Inhibitor Length = 452 | Back alignment and structure |
|
| >pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src Length = 452 | Back alignment and structure |
|
| >pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720 Length = 280 | Back alignment and structure |
|
| >pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Cgp77675 Length = 283 | Back alignment and structure |
|
| >pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase Length = 453 | Back alignment and structure |
|
| >pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451 Length = 279 | Back alignment and structure |
|
| >pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In Complex With Staurosporine Length = 309 | Back alignment and structure |
|
| >pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg- 1009247 Length = 270 | Back alignment and structure |
|
| >pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To Vinylsulfonamide- Pyrazolopyrimidine 9 Length = 286 | Back alignment and structure |
|
| >pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With Staurosporine Length = 309 | Back alignment and structure |
|
| >pdb|2PL0|A Chain A, Lck Bound To Imatinib Length = 289 | Back alignment and structure |
|
| >pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With Irreversible Inhibitor Length = 286 | Back alignment and structure |
|
| >pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation Length = 286 | Back alignment and structure |
|
| >pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b Length = 277 | Back alignment and structure |
|
| >pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck Length = 277 | Back alignment and structure |
|
| >pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533) Length = 276 | Back alignment and structure |
|
| >pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family- Selective Tyrosine Kinase Inhibitor Length = 454 | Back alignment and structure |
|
| >pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly Mutant) In Complex With N6-Benzyl Adp Length = 452 | Back alignment and structure |
|
| >pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck Length = 271 | Back alignment and structure |
|
| >pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain Length = 283 | Back alignment and structure |
|
| >pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck Length = 265 | Back alignment and structure |
|
| >pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx4032 Length = 289 | Back alignment and structure |
|
| >pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx3203 Length = 292 | Back alignment and structure |
|
| >pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck In Complex With Non-selective And Src Family Selective Kinase Inhibitors Length = 279 | Back alignment and structure |
|
| >pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase Domain Of Human Lck, (Auto-Phosphorylated On Tyr394) Length = 285 | Back alignment and structure |
|
| >pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule Inhibitor Length = 288 | Back alignment and structure |
|
| >pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule W259 Length = 287 | Back alignment and structure |
|
| >pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs Length = 286 | Back alignment and structure |
|
| >pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck In Complex With Non-Selective And Src Family Selective Kinase Inhibitors Length = 279 | Back alignment and structure |
|
| >pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20 Length = 322 | Back alignment and structure |
|
| >pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43 Bound To Lck Length = 273 | Back alignment and structure |
|
| >pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine Length = 267 | Back alignment and structure |
|
| >pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54 Length = 323 | Back alignment and structure |
|
| >pdb|4FSU|A Chain A, Crystal Structure Of The Chk1 Length = 279 | Back alignment and structure |
|
| >pdb|4FSM|A Chain A, Crystal Structure Of The Chk1 Length = 279 | Back alignment and structure |
|
| >pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With Staurosporine Length = 283 | Back alignment and structure |
|
| >pdb|4FSN|A Chain A, Crystal Structure Of The Chk1 Length = 278 | Back alignment and structure |
|
| >pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human Chk1 Kinase Domain Length = 273 | Back alignment and structure |
|
| >pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding Site Length = 271 | Back alignment and structure |
|
| >pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017 Length = 268 | Back alignment and structure |
|
| >pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994 Length = 269 | Back alignment and structure |
|
| >pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor Length = 269 | Back alignment and structure |
|
| >pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1 Bound To Lck Length = 272 | Back alignment and structure |
|
| >pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint Kinase Inhibitors - Hit To Lead Exploration Length = 276 | Back alignment and structure |
|
| >pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A Pyrrolo-Pyridine Inhibitor Length = 273 | Back alignment and structure |
|
| >pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights Into Hydrogen Bonding And Protein-Ligand Affinity Length = 297 | Back alignment and structure |
|
| >pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck), Activated Form (Auto-Phosphorylated On Tyr394) Length = 271 | Back alignment and structure |
|
| >pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint Kinase Chk1 Length = 289 | Back alignment and structure |
|
| >pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine Analog Length = 295 | Back alignment and structure |
|
| >pdb|4FSY|A Chain A, Crystal Structure Of The Chk1 Length = 279 | Back alignment and structure |
|
| >pdb|4FSW|A Chain A, Crystal Structure Of The Chk1 Length = 279 | Back alignment and structure |
|
| >pdb|4FT3|A Chain A, Crystal Structure Of The Chk1 Length = 279 | Back alignment and structure |
|
| >pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1 Length = 279 | Back alignment and structure |
|
| >pdb|4FST|A Chain A, Crystal Structure Of The Chk1 Length = 269 | Back alignment and structure |
|
| >pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By Structure Based Design And Optimization Of Thiophene Carboxamide Ureas Length = 276 | Back alignment and structure |
|
| >pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase Erk1 Length = 382 | Back alignment and structure |
|
| >pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1 Ectodomain Length = 772 | Back alignment and structure |
|
| >pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1 Length = 768 | Back alignment and structure |
|
| >pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A Tetrahydronaphthalene Inhibitor Length = 282 | Back alignment and structure |
|
| >pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With A [1, 3]thiazolo[5,4-B]pyridine Derivative Length = 284 | Back alignment and structure |
|
| >pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885 Length = 281 | Back alignment and structure |
|
| >pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006 Length = 276 | Back alignment and structure |
|
| >pdb|4H58|A Chain A, Braf In Complex With Compound 3 Length = 275 | Back alignment and structure |
|
| >pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine Inhibitor Length = 306 | Back alignment and structure |
|
| >pdb|3A4O|X Chain X, Lyn Kinase Domain Length = 286 | Back alignment and structure |
|
| >pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase Length = 307 | Back alignment and structure |
|
| >pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb Mutant Kinase Domain In Complex With Kt5720 Length = 311 | Back alignment and structure |
|
| >pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase Inhibiting Protein), A Leucine Rich Repeat Protein Involved In Plant Defense Length = 313 | Back alignment and structure |
|
| >pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP Length = 311 | Back alignment and structure |
|
| >pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant (Crystal Form 1) Length = 311 | Back alignment and structure |
|
| >pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycobacterium Tuberculosis Pknb. Length = 311 | Back alignment and structure |
|
| >pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant Length = 311 | Back alignment and structure |
|
| >pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain Length = 306 | Back alignment and structure |
|
| >pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium Tuberculosis Length = 299 | Back alignment and structure |
|
| >pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006 Length = 276 | Back alignment and structure |
|
| >pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex Length = 438 | Back alignment and structure |
|
| >pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An Aminoisoquinoline Inhibitor Length = 300 | Back alignment and structure |
|
| >pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii Dihydroquinazoline Inhibitor Length = 307 | Back alignment and structure |
|
| >pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor Length = 275 | Back alignment and structure |
|
| >pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal Sh3 Domain Length = 341 | Back alignment and structure |
|
| >pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And Unphosphorylated Kinase Domains Of The Cdc42-Associated Tyrosine Kinase Ack1 Bound To Amp-Pcp Length = 291 | Back alignment and structure |
|
| >pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed With Compound 16 Length = 271 | Back alignment and structure |
|
| >pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6 In Complex With Sangivamycin Length = 576 | Back alignment and structure |
|
| >pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain Length = 277 | Back alignment and structure |
|
| >pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6 Bound To Amppnp Length = 576 | Back alignment and structure |
|
| >pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95 Length = 276 | Back alignment and structure |
|
| >pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor Cis-3-[8-amino-1-(4- Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol Length = 273 | Back alignment and structure |
|
| >pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of The Tyrosine Kinase Ack1 Length = 291 | Back alignment and structure |
|
| >pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex. Length = 284 | Back alignment and structure |
|
| >pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form Length = 279 | Back alignment and structure |
|
| >pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The Dually-Phosphorylated, Activated State Length = 308 | Back alignment and structure |
|
| >pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase Length = 318 | Back alignment and structure |
|
| >pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase Catalytic Subunit From Saccharomyces Cerevisiae Length = 318 | Back alignment and structure |
|
| >pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor Length = 292 | Back alignment and structure |
|
| >pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor Length = 319 | Back alignment and structure |
|
| >pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880 (Gsk1 Length = 302 | Back alignment and structure |
|
| >pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain Of C-Met Length = 306 | Back alignment and structure |
|
| >pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine Inhibitor 13 Length = 309 | Back alignment and structure |
|
| >pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor. Length = 310 | Back alignment and structure |
|
| >pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor Length = 298 | Back alignment and structure |
|
| >pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium Parvum Calcium Dependent Protein Kinase In Complex With 3- Mb-Pp1 Length = 287 | Back alignment and structure |
|
| >pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent Protein Kinase Cgd3_920 From Cryptosporidium Parvum Length = 286 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321 | Back alignment and structure |
|---|
Score = 213 bits (545), Expect = 3e-64
Identities = 79/273 (28%), Positives = 118/273 (43%), Gaps = 63/273 (23%)
Query: 413 LRNATNNFSEENRLGRGGVGTVYKGELKDGTEVGVKRMELGSVTEQGIAQFESEITVLTK 472
L ATNNF + +G G G VYKG L+DG +V +KR S QGI +FE+EI L+
Sbjct: 34 LEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPES--SQGIEEFETEIETLSF 91
Query: 473 ----------------------------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVAR 504
G L RHL+ + + W RL I + AR
Sbjct: 92 CRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYG-SDLPTMSMSWEQRLEICIGAAR 150
Query: 505 G----------------------DDM--RVADFGLVRLVPENGKHSILTKVAGTFGYLAP 540
G ++ ++ DFG+ + E + + T V GT GY+ P
Sbjct: 151 GLHYLHTRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLSTVVKGTLGYIDP 210
Query: 541 EYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQKMHKNHDTFQM 600
EY + GR+T K DVYSFG++L +++ R + S P +++LA W + H N Q+
Sbjct: 211 EYFIKGRLTEKSDVYSFGVVLFEVLCARSAIV--QSLPREMVNLAEWAVESHNNGQLEQI 268
Query: 601 AIDKTI--QLDEENLANVSTVAELGDHCCANEP 631
+D + ++ E+L A C A
Sbjct: 269 -VDPNLADKIRPESLRKFGDTAVK---CLALSS 297
|
| >2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307 | Back alignment and structure |
|---|
Score = 212 bits (542), Expect = 6e-64
Identities = 71/279 (25%), Positives = 113/279 (40%), Gaps = 70/279 (25%)
Query: 413 LRNATNNFSEE------NRLGRGGVGTVYKGELKDGTEVGVKRMELGSVTE--QGIAQFE 464
L+N TNNF E N++G GG G VYKG + + T V VK++ + QF+
Sbjct: 20 LKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFD 78
Query: 465 SEITVLTK----------------------------GTLGRHLFNWEEEGLEPLEWNTRL 496
EI V+ K G+L L + G PL W+ R
Sbjct: 79 QEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLD--GTPPLSWHMRC 136
Query: 497 NIALDVARG----------------------DDMR--VADFGLVRLVPENGKHSILTKVA 532
IA A G + ++DFGL R + + + +++
Sbjct: 137 KIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMTSRIV 196
Query: 533 GTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQKMH 592
GT Y+APE + G IT K D+YSFG++L+++ITG VD L +++
Sbjct: 197 GTTAYMAPEA-LRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQ----LLLDIKEEIE 251
Query: 593 KNHDTFQMAIDKTIQLDEENLANVSTVAELGDHCCANEP 631
T + IDK +++ + +V + + C +
Sbjct: 252 DEEKTIEDYIDKK--MNDADSTSVEAMYSVASQCLHEKK 288
|
| >3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326 | Back alignment and structure |
|---|
Score = 208 bits (532), Expect = 3e-62
Identities = 80/276 (28%), Positives = 123/276 (44%), Gaps = 67/276 (24%)
Query: 413 LRNATNNFSEENRLGRGGVGTVYKGELKDGTEVGVKRMELGSVTEQGI-AQFESEITVLT 471
L+ A++NFS +N LGRGG G VYKG L DGT V VKR++ QG QF++E+ +++
Sbjct: 25 LQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERT--QGGELQFQTEVEMIS 82
Query: 472 K----------------------------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVA 503
G++ L E PL+W R IAL A
Sbjct: 83 MAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRE-RPESQPPLDWPKRQRIALGSA 141
Query: 504 RG-------------------------DDM--RVADFGLVRLVPENGKHSILTKVAGTFG 536
RG ++ V DFGL +L+ H + T V GT G
Sbjct: 142 RGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTH-VTTAVRGTIG 200
Query: 537 YLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQKMHKNHD 596
++APEY+ TG+ + K DV+ +G++L++LITG++ D + + L W + + K
Sbjct: 201 HIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKK 260
Query: 597 TFQMAIDKTIQ--LDEENLANVSTVAELGDHCCANE 630
+ +D +Q +E + + VA L C
Sbjct: 261 LEAL-VDVDLQGNYKDEEVEQLIQVALL----CTQS 291
|
| >1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8 Length = 313 | Back alignment and structure |
|---|
Score = 134 bits (341), Expect = 2e-35
Identities = 56/204 (27%), Positives = 82/204 (40%), Gaps = 23/204 (11%)
Query: 61 DAAVMQDLKASFVIPKRLK-W---SDPDPCQWSHVICSDDGQ---VTNIELQDQNRKGT- 112
D + +K P L W +D W V+C D Q V N++L N
Sbjct: 7 DKQALLQIKKDLGNPTTLSSWLPTTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPY 66
Query: 113 -VPPILKKLSSMAVMYLEN-NQLRGPIPSLVG---SLEFFSAYEANISGTIPDFIGTDTF 167
+P L L + +Y+ N L GPIP + L + N+SG IPDF+
Sbjct: 67 PIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQ--I 124
Query: 168 PQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLT 227
L LD N L GT+P S +L L ++ N+++G P S + T
Sbjct: 125 KTLVTLDFSYNALSGTLPPSIS-------SLPNLVGITFDGNRISGAIPDSYGSFSKLFT 177
Query: 228 TLNLTNNLLQGPTPR-FNNSKLTV 250
++ ++ N L G P F N L
Sbjct: 178 SMTISRNRLTGKIPPTFANLNLAF 201
|
| >1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8 Length = 313 | Back alignment and structure |
|---|
Score = 110 bits (277), Expect = 9e-27
Identities = 34/154 (22%), Positives = 54/154 (35%), Gaps = 15/154 (9%)
Query: 111 GTVPPILKKLSSMA-VMYLENNQLRGPIPSLVG--SLEFFSAYEANISGTIPDFIGTDTF 167
G +P S + M + N+L G IP +L F + G G+D
Sbjct: 163 GAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLNLAFVDLSRNMLEGDASVLFGSDK- 221
Query: 168 PQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLT 227
+ L N+L + + L L L +N++ G P L
Sbjct: 222 -NTQKIHLAKNSLAFDLGK--------VGLSKNLNGLDLRNNRIYGTLP-QGLTQLKFLH 271
Query: 228 TLNLTNNLLQGPTPRFNN-SKLTVDMRTGSNCFC 260
+LN++ N L G P+ N + V + C C
Sbjct: 272 SLNVSFNNLCGEIPQGGNLQRFDVSAYANNKCLC 305
|
| >1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8 Length = 313 | Back alignment and structure |
|---|
Score = 106 bits (267), Expect = 1e-25
Identities = 32/137 (23%), Positives = 53/137 (38%), Gaps = 16/137 (11%)
Query: 111 GTVPPILKKLSSMAVMYLENNQLRGPIPSLVGSL----EFFSAYEANISGTIPDFIGTDT 166
GT+PP + L ++ + + N++ G IP GS + ++G IP
Sbjct: 139 GTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN 198
Query: 167 FPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKL 226
L+++DL N L+G FG + + + L N L L
Sbjct: 199 ---LAFVDLSRNMLEGDASVLFG-------SDKNTQKIHLAKNSLAFDLG--KVGLSKNL 246
Query: 227 TTLNLTNNLLQGPTPRF 243
L+L NN + G P+
Sbjct: 247 NGLDLRNNRIYGTLPQG 263
|
| >1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8 Length = 313 | Back alignment and structure |
|---|
Score = 86.4 bits (215), Expect = 1e-18
Identities = 23/107 (21%), Positives = 37/107 (34%), Gaps = 13/107 (12%)
Query: 111 GTVPPILKKLSSMAVMYLENNQLRGPIPSLVG--SLEFFSAYEANISGTIPDFIGTDTFP 168
G + + ++L N L + + +L I GT+P +
Sbjct: 211 GDASVLFGSDKNTQKIHLAKNSLAFDLGKVGLSKNLNGLDLRNNRIYGTLPQGLT--QLK 268
Query: 169 QLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNK-LTGI 214
L L++ NNL G IP NL + + +NK L G
Sbjct: 269 FLHSLNVSFNNLCGEIPQG--------GNLQRFDVSAYANNKCLCGS 307
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 136 bits (346), Expect = 7e-34
Identities = 43/210 (20%), Positives = 78/210 (37%), Gaps = 16/210 (7%)
Query: 50 IPSASSNQSRPDAAVMQDLKASFVIPKRLK-WS-DPDPCQWSHVICSDDGQVTNIELQDQ 107
++ S + + K L WS + +PC + V C D +VT+I+L +
Sbjct: 2 FQASPSQSLYREIHQLISFKDVLPDKNLLPDWSSNKNPCTFDGVTC-RDDKVTSIDLSSK 60
Query: 108 N---RKGTVPPILKKLSSMAVMYLENNQLRGPIPSLVG--SLEFFSAYEANISGTIPDFI 162
V L L+ + ++L N+ + G + SL ++SG +
Sbjct: 61 PLNVGFSAVSSSLLSLTGLESLFLSNSHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLT 120
Query: 163 GTDTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVS--SF 220
+ L +L++ +N L S G L++LE L L N ++G V
Sbjct: 121 SLGSCSGLKFLNVSSNTLDFPGKVSGG------LKLNSLEVLDLSANSISGANVVGWVLS 174
Query: 221 NNHPKLTTLNLTNNLLQGPTPRFNNSKLTV 250
+ +L L ++ N + G L
Sbjct: 175 DGCGELKHLAISGNKISGDVDVSRCVNLEF 204
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 124 bits (313), Expect = 1e-29
Identities = 44/147 (29%), Positives = 58/147 (39%), Gaps = 15/147 (10%)
Query: 111 GTVPP-ILKKLSSMAVMYLENNQLRGPIPS----LVGSLEFFSAYEANISGTIPDFIGTD 165
G +P L K+ + V+ L N+ G +P L SL N SG I + +
Sbjct: 332 GELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQN 391
Query: 166 TFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPK 225
L L L NN G IP + N S L L L N L+G P SS + K
Sbjct: 392 PKNTLQELYLQNNGFTGKIPPTLS-------NCSELVSLHLSFNYLSGTIP-SSLGSLSK 443
Query: 226 LTTLNLTNNLLQGPTPR--FNNSKLTV 250
L L L N+L+G P+ L
Sbjct: 444 LRDLKLWLNMLEGEIPQELMYVKTLET 470
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 119 bits (301), Expect = 2e-28
Identities = 43/145 (29%), Positives = 58/145 (40%), Gaps = 15/145 (10%)
Query: 111 GTVPPILKKLSSMAVMYLENNQLRGPIPSLVG---SLEFFSAYEANISGTIPDFIGTDTF 167
G +PP L S + ++L N L G IPS +G L + + G IP +
Sbjct: 408 GKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMY--V 465
Query: 168 PQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLT 227
L L L N+L G IPS N + L +SL +N+LTG P L
Sbjct: 466 KTLETLILDFNDLTGEIPSGLS-------NCTNLNWISLSNNRLTGEIP-KWIGRLENLA 517
Query: 228 TLNLTNNLLQGPTPR--FNNSKLTV 250
L L+NN G P + L
Sbjct: 518 ILKLSNNSFSGNIPAELGDCRSLIW 542
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 116 bits (294), Expect = 2e-27
Identities = 39/135 (28%), Positives = 58/135 (42%), Gaps = 14/135 (10%)
Query: 111 GTVPPILKKLSSMAVMYLENNQLRGPIP-SLVG---SLEFFSAYEANISGTIPDFIGTDT 166
G +PP+ L S+ + L N+ G IP L G +L + G +P F G+
Sbjct: 261 GPIPPL--PLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGS-- 316
Query: 167 FPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKL 226
L L L +NN G +P + + L+ L L N+ +G P S N L
Sbjct: 317 CSLLESLALSSNNFSGELPMDT------LLKMRGLKVLDLSFNEFSGELPESLTNLSASL 370
Query: 227 TTLNLTNNLLQGPTP 241
TL+L++N GP
Sbjct: 371 LTLDLSSNNFSGPIL 385
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 113 bits (284), Expect = 3e-26
Identities = 32/142 (22%), Positives = 47/142 (33%), Gaps = 15/142 (10%)
Query: 111 GTVPPILKKLSSMAVMYLENNQLRGPIPSLVG---SLEFFSAYEANISGTIPDFIGTDTF 167
+P + S++ + + N+L G + L+ + G IP
Sbjct: 214 TGIPFLGD-CSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPLP----L 268
Query: 168 PQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLT 227
L YL L N G IP TL L L N G P F + L
Sbjct: 269 KSLQYLSLAENKFTGEIPDFLS------GACDTLTGLDLSGNHFYGAVP-PFFGSCSLLE 321
Query: 228 TLNLTNNLLQGPTPRFNNSKLT 249
+L L++N G P K+
Sbjct: 322 SLALSSNNFSGELPMDTLLKMR 343
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 107 bits (269), Expect = 2e-24
Identities = 33/147 (22%), Positives = 52/147 (35%), Gaps = 20/147 (13%)
Query: 111 GTVPP---ILKKLSSMAVMYLENNQLRGPIP-SLVGSLEFFSAYEANISGTIPDFIGTDT 166
G + + + + N++ G + S +LEF N S IP F+G
Sbjct: 165 GANVVGWVLSDGCGELKHLAISGNKISGDVDVSRCVNLEFLDVSSNNFSTGIP-FLGD-- 221
Query: 167 FPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKL 226
L +LD+ N L G + + L+ L++ N+ G P + L
Sbjct: 222 CSALQHLDISGNKLSGDFSRAIS-------TCTELKLLNISSNQFVGPIPPLPLKS---L 271
Query: 227 TTLNLTNNLLQGPTPRF---NNSKLTV 250
L+L N G P F LT
Sbjct: 272 QYLSLAENKFTGEIPDFLSGACDTLTG 298
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 101 bits (255), Expect = 1e-22
Identities = 39/160 (24%), Positives = 60/160 (37%), Gaps = 23/160 (14%)
Query: 111 GTVPPILKKLSSMAVMYLENNQLRGPIPSLVG---SLEFFSAYEANISGTIPDFIGTDTF 167
G +P L +++ + L NN+L G IP +G +L + SG IP +G
Sbjct: 480 GEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGD--C 537
Query: 168 PQLSYLDLGNNNLQGTIPSSF-------------GMPFADISNLSTLEDLSLGHN--KLT 212
L +LDL N GTIP++ G + I N ++ N +
Sbjct: 538 RSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQ 597
Query: 213 GIFPVSSFNNHPKLTTLNLTNNLLQGPTPRF--NNSKLTV 250
GI N N+T+ + G T NN +
Sbjct: 598 GIRS-EQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMF 636
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 92.7 bits (231), Expect = 9e-20
Identities = 39/155 (25%), Positives = 57/155 (36%), Gaps = 37/155 (23%)
Query: 98 QVTNIELQDQNRKGTVPPILKKLSSMAVMYLENNQLRGPIPSLVGSLEFFSAYEANISGT 157
+ + G P SM + + N L G IP +GS+
Sbjct: 609 TRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMP------------ 656
Query: 158 IPDFIGTDTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPV 217
L L+LG+N++ G+IP G +L L L L NKL G P
Sbjct: 657 -----------YLFILNLGHNDISGSIPDEVG-------DLRGLNILDLSSNKLDGRIP- 697
Query: 218 SSFNNHPKLTTLNLTNNLLQGPTPR------FNNS 246
+ + LT ++L+NN L GP P F +
Sbjct: 698 QAMSALTMLTEIDLSNNNLSGPIPEMGQFETFPPA 732
|
| >3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322 | Back alignment and structure |
|---|
Score = 116 bits (293), Expect = 5e-29
Identities = 48/275 (17%), Positives = 78/275 (28%), Gaps = 92/275 (33%)
Query: 396 SVVHSVDFGDMAIPIQVLRNATNNFSEENRLGRGGVGTVYKGELKDGTEVGVKRMELGSV 455
VD G + L + RG G V+K +L V VK +
Sbjct: 7 HHSSGVDLG-----TENLYFQSMPLQLLEVKARGRFGCVWKAQL-LNEYVAVKIFPIQDK 60
Query: 456 TEQGIAQFESEITVLTK--------------------------------GTLGRHLFNWE 483
Q E E+ L G+L L
Sbjct: 61 QSW---QNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLKA-- 115
Query: 484 EEGLEPLEWNTRLNIALDVARG--------------------------------DDMR-- 509
+ WN +IA +ARG +++
Sbjct: 116 ----NVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTAC 171
Query: 510 VADFGLVRLVPENGKHSILTKVAGTFGYLAPEYI-----VTGRITAKVDVYSFGMILMDL 564
+ADFGL GT Y+APE + ++D+Y+ G++L +L
Sbjct: 172 IADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWEL 231
Query: 565 ITGRKVVDATHSDPEYIIHLATWFQKMHKNHDTFQ 599
+ D EY++ F++ H + +
Sbjct: 232 ASRCTAADGPV--DEYML----PFEEEIGQHPSLE 260
|
| >3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309 | Back alignment and structure |
|---|
Score = 113 bits (286), Expect = 5e-28
Identities = 56/246 (22%), Positives = 87/246 (35%), Gaps = 66/246 (26%)
Query: 377 KKSSETVPIQVLRPRICGISVVHSVDFGDMAIPIQVLRNATNNFSEENRLGRGGVGTVYK 436
P + ++D DM IP + + + ++G G GTV++
Sbjct: 3 HHHHHHPMSDYDIPTTENLYFQGAMDGDDMDIPW-------CDLNIKEKIGAGSFGTVHR 55
Query: 437 GELKDGTEVGVKRMELGSVTEQGIAQFESEITVLTK------------------------ 472
E G++V VK + + + +F E+ ++ +
Sbjct: 56 AEWH-GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTE 114
Query: 473 ----GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG----------------------- 505
G+L R L E L+ RL++A DVA+G
Sbjct: 115 YLSRGSLYRLLHK--SGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLV 172
Query: 506 -DDMRV--ADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILM 562
V DFGL RL S AGT ++APE + K DVYSFG+IL
Sbjct: 173 DKKYTVKVCDFGLSRLKASTFLSS--KSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILW 230
Query: 563 DLITGR 568
+L T +
Sbjct: 231 ELATLQ 236
|
| >3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289 | Back alignment and structure |
|---|
Score = 108 bits (272), Expect = 2e-26
Identities = 49/200 (24%), Positives = 78/200 (39%), Gaps = 60/200 (30%)
Query: 423 ENRLGRGGVGTVYKGELKDGTEVGVKRMELGSVTEQGIAQFESEITVLTK---------- 472
R+G G GTVYKG+ +V VK + + + T Q + F++E+ VL K
Sbjct: 29 GQRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 86
Query: 473 -----------------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG---------- 505
+L HL E E ++IA ARG
Sbjct: 87 GYSTAPQLAIVTQWCEGSSLYHHLHASET----KFEMKKLIDIARQTARGMDYLHAKSII 142
Query: 506 ------------DDMRV--ADFGLVRLVPENGKHSILTKVAGTFGYLAPEYI---VTGRI 548
+D V DFGL +++G+ ++APE I +
Sbjct: 143 HRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPY 202
Query: 549 TAKVDVYSFGMILMDLITGR 568
+ + DVY+FG++L +L+TG+
Sbjct: 203 SFQSDVYAFGIVLYELMTGQ 222
|
| >2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319 | Back alignment and structure |
|---|
Score = 108 bits (271), Expect = 4e-26
Identities = 37/216 (17%), Positives = 66/216 (30%), Gaps = 72/216 (33%)
Query: 419 NFSE---ENRLGRGGVGTVYKGELKDGTEVGVKRMELGSVTEQGIAQFESEITVLTK--- 472
F + +G+G G VY G EV ++ +++ E + F+ E+ +
Sbjct: 31 PFEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRH 88
Query: 473 -------------------------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG-- 505
TL + + + L+ N IA ++ +G
Sbjct: 89 ENVVLFMGACMSPPHLAIITSLCKGRTLYSVVRDAKI----VLDVNKTRQIAQEIVKGMG 144
Query: 506 -------------------DDMRV--ADFGLVRL---VPENGKHSILTKVAGTFGYLAPE 541
D+ +V DFGL + + + L G +LAPE
Sbjct: 145 YLHAKGILHKDLKSKNVFYDNGKVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPE 204
Query: 542 YIVTGRI---------TAKVDVYSFGMILMDLITGR 568
I + DV++ G I +L
Sbjct: 205 IIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHARE 240
|
| >2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307 | Back alignment and structure |
|---|
Score = 107 bits (270), Expect = 5e-26
Identities = 40/206 (19%), Positives = 68/206 (33%), Gaps = 66/206 (32%)
Query: 418 NNFSEENRLGRGGVGTVYKGELKDGTEVGVKRMELGSVTEQGIAQFESEITVLTK----- 472
E +GRG G V K + + +V +K++E +E F E+ L++
Sbjct: 8 KEIEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIE----SESERKAFIVELRQLSRVNHPN 62
Query: 473 ---------------------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------ 505
G+L L E L ++ L ++G
Sbjct: 63 IVKLYGACLNPVCLVMEYAEGGSLYNVLHG--AEPLPYYTAAHAMSWCLQCSQGVAYLHS 120
Query: 506 -------------------DDMR---VADFGLVRLVPENGKHSILTKVAGTFGYLAPEYI 543
+ DFG + +T G+ ++APE
Sbjct: 121 MQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACD-----IQTHMTNNKGSAAWMAPEVF 175
Query: 544 VTGRITAKVDVYSFGMILMDLITGRK 569
+ K DV+S+G+IL ++IT RK
Sbjct: 176 EGSNYSEKCDVFSWGIILWEVITRRK 201
|
| >4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287 | Back alignment and structure |
|---|
Score = 102 bits (255), Expect = 3e-24
Identities = 50/217 (23%), Positives = 80/217 (36%), Gaps = 74/217 (34%)
Query: 418 NNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQG-----IAQFESEITVLT 471
N E ++G+GG G V+KG L D + V +K + LG + +F+ E+ +++
Sbjct: 19 NEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMS 78
Query: 472 K--------------------------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG 505
G L L + P++W+ +L + LD+A G
Sbjct: 79 NLNHPNIVKLYGLMHNPPRMVMEFVPCGDLYHRLLDKAH----PIKWSVKLRLMLDIALG 134
Query: 506 -------------------------------DDMRVADFGLVRLVPENGKHSILTKVAGT 534
+VADFGL + ++ + G
Sbjct: 135 IEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQ-----SVHSVSGLLGN 189
Query: 535 FGYLAPEYIVT--GRITAKVDVYSFGMILMDLITGRK 569
F ++APE I T K D YSF MIL ++TG
Sbjct: 190 FQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEG 226
|
| >3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271 | Back alignment and structure |
|---|
Score = 98.1 bits (245), Expect = 5e-23
Identities = 46/218 (21%), Positives = 71/218 (32%), Gaps = 79/218 (36%)
Query: 419 NFSE---ENRLGRGGVGTVYKGELKDGTEVGVKRMELGSVTE--QGIAQFESEITVLTK- 472
+F+E E +G GG G VY+ G EV VK + Q I E +
Sbjct: 5 DFAELTLEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAML 63
Query: 473 ---------------------------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG 505
G L R L + + + +N A+ +ARG
Sbjct: 64 KHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSG------KRIPPDILVNWAVQIARG 117
Query: 506 -----------------------------------DDMRVADFGLVRLVPENGKHSILTK 530
+++ DFGL R K
Sbjct: 118 MNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTK----MS 173
Query: 531 VAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGR 568
AG + ++APE I + DV+S+G++L +L+TG
Sbjct: 174 AAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGE 211
|
| >3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271 | Back alignment and structure |
|---|
Score = 97.3 bits (243), Expect = 1e-22
Identities = 33/212 (15%), Positives = 66/212 (31%), Gaps = 73/212 (34%)
Query: 419 NFSE---ENRLGRGGVGTVYKGELKDGTEVGVKRMELGSVTEQGIAQFESEITVLTK--- 472
+F + +L G ++KG + G ++ VK +++ + + F E L
Sbjct: 8 DFKQLNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSH 66
Query: 473 ---------------------------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG 505
G+L L ++ + + ALD+ARG
Sbjct: 67 PNVLPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNF---VVDQSQAVKFALDMARG 123
Query: 506 ------------------------DDM--RVADFGLVRLVPENGKHSILTKVAGTFGYLA 539
+DM R++ + G+ ++A
Sbjct: 124 MAFLHTLEPLIPRHALNSRSVMIDEDMTARISMADVKFSFQSPGR-------MYAPAWVA 176
Query: 540 PEYI---VTGRITAKVDVYSFGMILMDLITGR 568
PE + D++SF ++L +L+T
Sbjct: 177 PEALQKKPEDTNRRSADMWSFAVLLWELVTRE 208
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 100 bits (250), Expect = 4e-22
Identities = 28/173 (16%), Positives = 58/173 (33%), Gaps = 20/173 (11%)
Query: 80 WS-DPDPCQWSH---VICSDDGQVTNIELQDQNRKGTVPPILKKLSSMAVMYLENNQLRG 135
W+ + + W V + +G+VT + L+ G VP + +L+ + V+ L ++ +
Sbjct: 60 WNFNKELDMWGAQPGVSLNSNGRVTGLSLEGFGASGRVPDAIGQLTELEVLALGSHGEKV 119
Query: 136 P----IPSLVG---SLEFFSAYEANISGTIPDFIGTDTFPQLSYLDLGNNNLQGTIPSSF 188
P + S E + T D+ + F L + ++ Q +I S
Sbjct: 120 NERLFGPKGISANMSDEQKQKMRMHYQKTFVDYDPREDFSDLIKDCINSDPQQKSIKKS- 178
Query: 189 GMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNNLLQGPTP 241
+ N +T + + KL + N+
Sbjct: 179 ------SRITLKDTQIGQLSNNITFV-S-KAVMRLTKLRQFYMGNSPFVAENI 223
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 95.5 bits (238), Expect = 1e-20
Identities = 26/163 (15%), Positives = 59/163 (36%), Gaps = 25/163 (15%)
Query: 100 TNIELQDQNRKGTVPPILKKLSSMAVMYLENNQLRGPIPSLVGSLEFFSAYEAN------ 153
T++E+ + +P LK L M ++ + N+ L + +
Sbjct: 252 TDVEVYNCPNLTKLPTFLKALPEMQLINVACNRGIS-GEQLKDDWQALADAPVGEKIQII 310
Query: 154 -------ISGTIPDFIGTDTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSL 206
+ + + +L L+ N L+G +P+ + L L+L
Sbjct: 311 YIGYNNLKTFPVETSLQK--MKKLGMLECLYNQLEGKLPA--------FGSEIKLASLNL 360
Query: 207 GHNKLTGIFPVSSFNNHPKLTTLNLTNNLLQGPTPRFNNSKLT 249
+N++T I P + ++ L+ +N L+ F+ ++
Sbjct: 361 AYNQITEI-PANFCGFTEQVENLSFAHNKLKYIPNIFDAKSVS 402
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 95.5 bits (238), Expect = 1e-20
Identities = 32/152 (21%), Positives = 53/152 (34%), Gaps = 15/152 (9%)
Query: 112 TVPPIL--KKLSSMAVMYLENNQLRG-------PIPSLVG---SLEFFSAYEANISGTIP 159
+P I K +S M+ + N++ P+ ++ + IS
Sbjct: 391 YIPNIFDAKSVSVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQISKFPK 450
Query: 160 DFIGTDTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSS 219
+ T LS ++L N L +S + N L + L NKLT +
Sbjct: 451 ELFST--GSPLSSINLMGNMLTEIPKNSLKDENENFKNTYLLTSIDLRFNKLTKLSDDFR 508
Query: 220 FNNHPKLTTLNLTNNLLQG-PTPRFNNSKLTV 250
P L ++L+ N PT N+S L
Sbjct: 509 ATTLPYLVGIDLSYNSFSKFPTQPLNSSTLKG 540
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 94.3 bits (235), Expect = 2e-20
Identities = 27/168 (16%), Positives = 50/168 (29%), Gaps = 28/168 (16%)
Query: 108 NRKGTVPPILKKLSSMAVMYLENNQLRGPIPSLVG----------------------SLE 145
N V + +L+ + Y+ N+ L
Sbjct: 193 NNITFVSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLT 252
Query: 146 FFSAYEANISGTIPDFIGTDTFPQLSYLDLGNNNLQG--TIPSSFGMPFADISNLSTLED 203
Y +P F+ P++ +++ N + + AD ++
Sbjct: 253 DVEVYNCPNLTKLPTFLKA--LPEMQLINVACNRGISGEQLKDDWQAL-ADAPVGEKIQI 309
Query: 204 LSLGHNKLTGIFPVSSFNNHPKLTTLNLTNNLLQGPTPRF-NNSKLTV 250
+ +G+N L +S KL L N L+G P F + KL
Sbjct: 310 IYIGYNNLKTFPVETSLQKMKKLGMLECLYNQLEGKLPAFGSEIKLAS 357
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 77.8 bits (192), Expect = 4e-15
Identities = 19/128 (14%), Positives = 38/128 (29%), Gaps = 23/128 (17%)
Query: 119 KLSSMAVMYLENNQLRGPIPSLVG---SLEFFSAYEA------NISGTIPDFIGTDTFPQ 169
L + + L N P+ +L+ F P+ I P
Sbjct: 511 TLPYLVGIDLSYNSFSK-FPTQPLNSSTLKGFGIRNQRDAQGNRTLREWPEGITL--CPS 567
Query: 170 LSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTL 229
L+ L +G+N+++ + + L + N I +S + +
Sbjct: 568 LTQLQIGSNDIR-KVNEKI---------TPNISVLDIKDNPNISI-DLSYVCPYIEAGMY 616
Query: 230 NLTNNLLQ 237
L + Q
Sbjct: 617 MLFYDKTQ 624
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 61.2 bits (149), Expect = 5e-10
Identities = 12/79 (15%), Positives = 25/79 (31%), Gaps = 7/79 (8%)
Query: 165 DTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHP 224
++ +++ L L G +P + G L+ LE L+LG + +
Sbjct: 78 NSNGRVTGLSLEGFGASGRVPDAIG-------QLTELEVLALGSHGEKVNERLFGPKGIS 130
Query: 225 KLTTLNLTNNLLQGPTPRF 243
+ + F
Sbjct: 131 ANMSDEQKQKMRMHYQKTF 149
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 49.7 bits (119), Expect = 2e-06
Identities = 12/80 (15%), Positives = 25/80 (31%), Gaps = 1/80 (1%)
Query: 170 LSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTL 229
N N + P +++ + LSL +G P + +L L
Sbjct: 52 FGTQPGANWNFNKELDMWGAQPGVSLNSNGRVTGLSLEGFGASGRVP-DAIGQLTELEVL 110
Query: 230 NLTNNLLQGPTPRFNNSKLT 249
L ++ + F ++
Sbjct: 111 ALGSHGEKVNERLFGPKGIS 130
|
| >3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310 | Back alignment and structure |
|---|
Score = 91.6 bits (228), Expect = 2e-20
Identities = 44/211 (20%), Positives = 68/211 (32%), Gaps = 69/211 (32%)
Query: 423 ENRLGRGGVGTVYKGELKDGTEVGVKRMELGSVTEQGIAQFESEITVLTK---------- 472
LG+G G K + T + EL E+ F E+ V+
Sbjct: 15 GEVLGKGCFGQAIKVTHR-ETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFI 73
Query: 473 ------------------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG--------- 505
GTL + + + W+ R++ A D+A G
Sbjct: 74 GVLYKDKRLNFITEYIKGGTLRGIIKSMDS----QYPWSQRVSFAKDIASGMAYLHSMNI 129
Query: 506 -------------DDMR--VADFGLVRLVPENGKHS------------ILTKVAGTFGYL 538
++ VADFGL RL+ + V G ++
Sbjct: 130 IHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWM 189
Query: 539 APEYIVTGRITAKVDVYSFGMILMDLITGRK 569
APE I KVDV+SFG++L ++I
Sbjct: 190 APEMINGRSYDEKVDVFSFGIVLCEIIGRVN 220
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 91.6 bits (228), Expect = 1e-19
Identities = 30/141 (21%), Positives = 51/141 (36%), Gaps = 11/141 (7%)
Query: 108 NRKGTVPPILKKLSSMAVMYLENNQLRGPIPSLVG--SLEFFSAYEANISGTIPDFIGTD 165
+ KG +S+ + L N + + +G LE +N+ +
Sbjct: 360 SFKGCCSQSDFGTTSLKYLDLSFNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLS 419
Query: 166 TFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPK 225
L YLD+ + + + F LS+LE L + N F F
Sbjct: 420 -LRNLIYLDISHTHTRVAFNGIFN-------GLSSLEVLKMAGNSFQENFLPDIFTELRN 471
Query: 226 LTTLNLTNNLLQGPTPR-FNN 245
LT L+L+ L+ +P FN+
Sbjct: 472 LTFLDLSQCQLEQLSPTAFNS 492
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 90.1 bits (224), Expect = 5e-19
Identities = 23/132 (17%), Positives = 46/132 (34%), Gaps = 14/132 (10%)
Query: 114 PPILKKLSSMAVMYLENNQLRGPIPSLVG---SLEFFSAYEANISGTI-PDFIGTDTFPQ 169
+ L ++ + + + R + SLE + PD
Sbjct: 414 FSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTE--LRN 471
Query: 170 LSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTL 229
L++LDL L+ P++F +LS+L+ L++ HN + + L L
Sbjct: 472 LTFLDLSQCQLEQLSPTAFN-------SLSSLQVLNMSHNNFFSLDT-FPYKCLNSLQVL 523
Query: 230 NLTNNLLQGPTP 241
+ + N +
Sbjct: 524 DYSLNHIMTSKK 535
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 86.6 bits (215), Expect = 7e-18
Identities = 22/135 (16%), Positives = 39/135 (28%), Gaps = 12/135 (8%)
Query: 110 KGTVPPILKKLSSMAVMYLENNQLRGPIPSLVG---SLEFFSAYEANISGTIPDFIGTDT 166
+ + V+ L +++ L I
Sbjct: 41 RHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSG-- 98
Query: 167 FPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKL 226
L L NL G +L TL++L++ HN + F+N L
Sbjct: 99 LSSLQKLVAVETNLASLENFPIG-------HLKTLKELNVAHNLIQSFKLPEYFSNLTNL 151
Query: 227 TTLNLTNNLLQGPTP 241
L+L++N +Q
Sbjct: 152 EHLDLSSNKIQSIYC 166
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 83.5 bits (207), Expect = 6e-17
Identities = 23/133 (17%), Positives = 43/133 (32%), Gaps = 13/133 (9%)
Query: 110 KGTVPPILKKLSSMAVMYLENNQLRGPIP----SLVGSLEFFSAYEANISGTIPDFIGTD 165
+ I LSS+ V+ + N + + + +L F + + P +
Sbjct: 434 RVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNS- 492
Query: 166 TFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPK 225
L L++ +NN + L++L+ L N + +
Sbjct: 493 -LSSLQVLNMSHNNFFSLDTFPY-------KCLNSLQVLDYSLNHIMTSKKQELQHFPSS 544
Query: 226 LTTLNLTNNLLQG 238
L LNLT N
Sbjct: 545 LAFLNLTQNDFAC 557
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 81.2 bits (201), Expect = 3e-16
Identities = 31/170 (18%), Positives = 45/170 (26%), Gaps = 45/170 (26%)
Query: 84 DPCQWSHVICSDDGQVTNIELQDQNRKGT-VPPILKKLSSMAVMYLENNQLRGPIPSLVG 142
+PC + V NI Q +P L S + L N LR
Sbjct: 1 EPC-----VEV----VPNITYQCMELNFYKIPDNL--PFSTKNLDLSFNPLRHLGSYSFF 49
Query: 143 SLEFFSAYEANISGTIPDFIGTDTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLE 202
S P+L LDL +Q ++ +LS L
Sbjct: 50 SF-----------------------PELQVLDLSRCEIQTIEDGAYQ-------SLSHLS 79
Query: 203 DLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNNLLQGPTPRF--NNSKLTV 250
L L N + + +F+ L L L + L
Sbjct: 80 TLILTGNPIQSLAL-GAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKE 128
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 78.5 bits (194), Expect = 2e-15
Identities = 28/141 (19%), Positives = 47/141 (33%), Gaps = 13/141 (9%)
Query: 114 PPILKKLSSMAVMYLENNQLRGPIPSLVG---SLEFFSAYEANI-SGTIPDFIGTDTFPQ 169
LSS+ + L +G +L+ + I S +P++
Sbjct: 93 LGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSN--LTN 150
Query: 170 LSYLDLGNNNLQGTIPSSFGMPFADISNLSTLE-DLSLGHNKLTGIFPVSSFNNHPKLTT 228
L +LDL +N +Q + + + L L L N + I P +F +L
Sbjct: 151 LEHLDLSSNKIQSIYCTDLR----VLHQMPLLNLSLDLSLNPMNFIQP-GAFKE-IRLHK 204
Query: 229 LNLTNNLLQGPTPRFNNSKLT 249
L L NN + L
Sbjct: 205 LTLRNNFDSLNVMKTCIQGLA 225
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 78.1 bits (193), Expect = 3e-15
Identities = 31/150 (20%), Positives = 46/150 (30%), Gaps = 31/150 (20%)
Query: 103 ELQDQNRKGTVPPILKKLSSMAVMYLENNQLRGPIPSLVGSLEFFSAYEANISGTIPDFI 162
L + KG L S+ + L N L + G
Sbjct: 329 RLTFTSNKGGNAFSEVDLPSLEFLDLSRNGL-------------------SFKGCCSQSD 369
Query: 163 GTDTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNN 222
L YLDL N + T+ S+F L LE L H+ L + S F +
Sbjct: 370 FG--TTSLKYLDLSFNGVI-TMSSNF-------LGLEQLEHLDFQHSNLKQMSEFSVFLS 419
Query: 223 HPKLTTLNLTNNLLQGPTPRF--NNSKLTV 250
L L++++ + S L V
Sbjct: 420 LRNLIYLDISHTHTRVAFNGIFNGLSSLEV 449
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 68.1 bits (167), Expect = 4e-12
Identities = 21/172 (12%), Positives = 51/172 (29%), Gaps = 36/172 (20%)
Query: 111 GTVPPILKKLSSMAVMYLENNQLRGPIPSLVGSLEFFSAYEA-------NISGTIPDFIG 163
+P L+++ + L +N+++ + + L ++ P
Sbjct: 139 FKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFK 198
Query: 164 TDTFPQLSYLDLGNNNLQGTIPSSF---------------------GMPFADISNLSTLE 202
+L L L NN + + + D S L L
Sbjct: 199 E---IRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLC 255
Query: 203 DLSLGHNKLTGI-----FPVSSFNNHPKLTTLNLTNNLLQGPTPRFNNSKLT 249
+L++ +L + + FN +++ +L + ++ N
Sbjct: 256 NLTIEEFRLAYLDYYLDDIIDLFNCLTNVSSFSLVSVTIERVKDFSYNFGWQ 307
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 62.0 bits (151), Expect = 3e-10
Identities = 19/150 (12%), Positives = 34/150 (22%), Gaps = 9/150 (6%)
Query: 108 NRKGTVPPILKKLSSMAVMYLENNQLRGPIPSLV----GSLEFFSAYEANISGTIP-DFI 162
N + P K + + L NN + LE +
Sbjct: 187 NPMNFIQPGAFKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKF 246
Query: 163 GTDTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNN 222
L L + L + + L+ + SL + + F+
Sbjct: 247 DKSALEGLCNLTIEEFRLA-YLDYYLDDIIDLFNCLTNVSSFSLVSVTIERVKD---FSY 302
Query: 223 HPKLTTLNLTNNLLQGPTPRFNNSKLTVDM 252
+ L L N S +
Sbjct: 303 NFGWQHLELVNCKFGQFPTLKLKSLKRLTF 332
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 60.8 bits (148), Expect = 7e-10
Identities = 22/122 (18%), Positives = 42/122 (34%), Gaps = 11/122 (9%)
Query: 114 PPILKKLSSMAVMYLENNQLRGPIPSLVG---SLEFFSAYEANISGTIPDFIGTDTFPQL 170
P LSS+ V+ + +N SL+ +I + + L
Sbjct: 487 PTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQ-HFPSSL 545
Query: 171 SYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLN 230
++L+L N+ T F + + L + ++ P S P + +LN
Sbjct: 546 AFLNLTQNDFACTCEHQ---SF--LQWIKDQRQLLVEVERMECATP-SDKQGMP-VLSLN 598
Query: 231 LT 232
+T
Sbjct: 599 IT 600
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 54.3 bits (131), Expect = 8e-08
Identities = 28/186 (15%), Positives = 50/186 (26%), Gaps = 46/186 (24%)
Query: 100 TNIELQDQNRKGTVPP-ILKKLSSMAVMYLENNQLRG------PIPSLVGSLEFFS---- 148
+ L++ V ++ L+ + V L + R S + L +
Sbjct: 203 HKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEF 262
Query: 149 --AYEANISGTIPDFIGTDTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSL 206
AY I D +S L + ++ S+ + L L
Sbjct: 263 RLAYLDYYLDDIIDLFNC--LTNVSSFSLVSVTIERVKDFSY---------NFGWQHLEL 311
Query: 207 GHNKLTGIFP------------------VSSFNNHPKLTTLNLTNNLLQ--GPTPR--FN 244
+ K S + P L L+L+ N L G + F
Sbjct: 312 VNCKFGQFPTLKLKSLKRLTFTSNKGGNAFSEVDLPSLEFLDLSRNGLSFKGCCSQSDFG 371
Query: 245 NSKLTV 250
+ L
Sbjct: 372 TTSLKY 377
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 | Back alignment and structure |
|---|
Score = 91.5 bits (227), Expect = 3e-19
Identities = 27/167 (16%), Positives = 52/167 (31%), Gaps = 26/167 (15%)
Query: 108 NRKGTVPPILKKLSSMAVMYLENNQLRGPIPSLVG----------------------SLE 145
NR + +++L+ + ++Y N+ ++ L
Sbjct: 435 NRITFISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLT 494
Query: 146 FFSAYEANISGTIPDFIGTDTFPQLSYLDLGNNNLQGTIPSSFGMP--FADISNLSTLED 203
Y +PDF+ P+L L++ N D ++
Sbjct: 495 DVELYNCPNMTQLPDFLYD--LPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQI 552
Query: 204 LSLGHNKLTGIFPVSSFNNHPKLTTLNLTNNLLQGPTPRFNNSKLTV 250
+G+N L +S KL L+ +N ++ N KLT
Sbjct: 553 FYMGYNNLEEFPASASLQKMVKLGLLDCVHNKVRHLEAFGTNVKLTD 599
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 | Back alignment and structure |
|---|
Score = 91.1 bits (226), Expect = 3e-19
Identities = 32/170 (18%), Positives = 60/170 (35%), Gaps = 14/170 (8%)
Query: 92 ICSDDGQVTNIELQDQNRKGTVPPI--LKKLSSMAVMYLENNQLRGPIPSLVGSLEFFSA 149
C+ QV + N+ +P I K + M + N++ ++ S++ +
Sbjct: 614 FCAFTDQVEGLGFSH-NKLKYIPNIFNAKSVYVMGSVDFSYNKIGSEGRNISCSMDDYKG 672
Query: 150 --------YEANISGTIPDFIGTDTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTL 201
I + T +S + L NN + +S + N L
Sbjct: 673 INASTVTLSYNEIQKFPTELFAT--GSPISTIILSNNLMTSIPENSLKPKDGNYKNTYLL 730
Query: 202 EDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNNLLQG-PTPRFNNSKLTV 250
+ L NKLT + P L+ ++++ N PT N+S+L
Sbjct: 731 TTIDLRFNKLTSLSDDFRATTLPYLSNMDVSYNCFSSFPTQPLNSSQLKA 780
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 | Back alignment and structure |
|---|
Score = 85.3 bits (211), Expect = 2e-17
Identities = 31/149 (20%), Positives = 54/149 (36%), Gaps = 24/149 (16%)
Query: 100 TNIELQDQNRKGTVPPILKKLSSMAVMYLENNQLRGPIPSLVGSLEFFSAYEANISGTIP 159
T++EL + +P L L + + + N+ L +
Sbjct: 494 TDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGIS-AAQLKADW-----------TRLA 541
Query: 160 DFIGTDTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSS 219
D T P++ +G NNL+ P+S A + + L L HNK+ + +
Sbjct: 542 DDED--TGPKIQIFYMGYNNLEE-FPAS-----ASLQKMVKLGLLDCVHNKVRHL---EA 590
Query: 220 FNNHPKLTTLNLTNNLLQG-PTPRFNNSK 247
F + KLT L L N ++ P +
Sbjct: 591 FGTNVKLTDLKLDYNQIEEIPEDFCAFTD 619
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 | Back alignment and structure |
|---|
Score = 76.8 bits (189), Expect = 1e-14
Identities = 32/225 (14%), Positives = 62/225 (27%), Gaps = 61/225 (27%)
Query: 80 WS-DPDPCQWSH---VICSDDGQVTNIELQDQNRKGTVPPILKKLSSMAVMYLENNQLRG 135
W+ + + W V ++G+VT + L KG VP + +L+ + V+ +
Sbjct: 302 WNFNKELDMWGDQPGVDLDNNGRVTGLSLAGFGAKGRVPDAIGQLTELKVLSFGTHSETV 361
Query: 136 PIPSLVG---SLEFFSAYEANISGTIPD--------------------------FIGTDT 166
+ + + I I D+
Sbjct: 362 SGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAINRNPEMKPIKKDS 421
Query: 167 FPQLSYLDLGN-NNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPV-------- 217
L +GN N I + L+ L+ + ++ T
Sbjct: 422 RISLKDTQIGNLTNRITFISKAIQ-------RLTKLQIIYFANSPFTYDNIAVDWEDANS 474
Query: 218 ----------SSFNNHPKLTTLNLTNNLLQGPTPR--FNNSKLTV 250
S++N LT + L N P ++ +L
Sbjct: 475 DYAKQYENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQS 519
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 | Back alignment and structure |
|---|
Score = 67.2 bits (164), Expect = 1e-11
Identities = 22/128 (17%), Positives = 38/128 (29%), Gaps = 23/128 (17%)
Query: 119 KLSSMAVMYLENNQLRGPIPSLVGSLEFF---------SAYEANISGTIPDFIGTDTFPQ 169
L ++ M + N P+ + A I P I T P
Sbjct: 751 TLPYLSNMDVSYNCFSS-FPTQPLNSSQLKAFGIRHQRDAEGNRILRQWPTGITT--CPS 807
Query: 170 LSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTL 229
L L +G+N+++ + L L + N I V+S + +
Sbjct: 808 LIQLQIGSNDIR-KVDEKL---------TPQLYILDIADNPNISI-DVTSVCPYIEAGMY 856
Query: 230 NLTNNLLQ 237
L + Q
Sbjct: 857 VLLYDKTQ 864
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 | Back alignment and structure |
|---|
Score = 52.6 bits (126), Expect = 3e-07
Identities = 24/169 (14%), Positives = 44/169 (26%), Gaps = 20/169 (11%)
Query: 96 DGQVTNIELQDQNRKGTVPPILKKLSSMAVMYLEN------------NQLRGPIPSLVGS 143
QV Q+ + + + ++N + I
Sbjct: 215 TYQVVAYTTYSQSGIKRSELETQSVRGESFTVIDNKLTKDANVPIQLKETAEYIKDYKAL 274
Query: 144 LEFFSAYEANISGTIPDFIGTDTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLED 203
+ A + G + + N N + P D+ N +
Sbjct: 275 KAIWEA----LDGKNWRYYSGTINN---TIHSLNWNFNKELDMWGDQPGVDLDNNGRVTG 327
Query: 204 LSLGHNKLTGIFPVSSFNNHPKLTTLNLTNNLLQGPTPRFNNSKLTVDM 252
LSL G P + +L L+ + F + +LT DM
Sbjct: 328 LSLAGFGAKGRVP-DAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDM 375
|
| >3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336 | Back alignment and structure |
|---|
Score = 87.6 bits (217), Expect = 6e-19
Identities = 48/254 (18%), Positives = 72/254 (28%), Gaps = 89/254 (35%)
Query: 406 MAIPIQVLRNATNNFSEENRLGRGGVGTVYKGELKDGTEVGVKRMELGSVTEQGIAQFES 465
M +N +GRG G VYKG L D V VK + Q E
Sbjct: 1 MEAAASEPSLDLDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFAN--RQNFIN-EK 56
Query: 466 EITVLTK---------------------------------GTLGRHLFNWEEEGLEPLEW 492
I + G+L ++L +W
Sbjct: 57 NIYRVPLMEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSL------HTSDW 110
Query: 493 NTRLNIALDVARG-------------------------------DDMR--VADFGLVR-- 517
+ +A V RG +D ++DFGL
Sbjct: 111 VSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRL 170
Query: 518 ----LVPENGKHSILTKVAGTFGYLAPEYI-------VTGRITAKVDVYSFGMILMDLIT 566
LV + + GT Y+APE + +VD+Y+ G+I ++
Sbjct: 171 TGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFM 230
Query: 567 GRKVVDATHSDPEY 580
+ S PEY
Sbjct: 231 RCTDLFPGESVPEY 244
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 88.1 bits (219), Expect = 3e-18
Identities = 33/171 (19%), Positives = 58/171 (33%), Gaps = 19/171 (11%)
Query: 89 SHVICSDDGQVTNIELQ----DQNR-KGTVPPILKKLSSMAVMYLENNQLRGPIPSLVG- 142
+ + N L+ N+ K P + + ++L N QL + +
Sbjct: 158 QALKSEELDIFANSSLKKLELSSNQIKEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCL 217
Query: 143 -----SLEFFSAYEANISGTIPDFIGTDTFPQLSYLDLGNNNLQGTIPSSFGMPFADISN 197
S+ S + +S T + L+ LDL NNL SF +
Sbjct: 218 ELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVGNDSF-------AW 270
Query: 198 LSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNNLLQGPTPRFNNSKL 248
L LE L +N + +F S + + LNL + + + K+
Sbjct: 271 LPQLEYFFLEYNNIQHLFS-HSLHGLFNVRYLNLKRSFTKQSISLASLPKI 320
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 86.2 bits (214), Expect = 1e-17
Identities = 26/147 (17%), Positives = 49/147 (33%), Gaps = 20/147 (13%)
Query: 114 PPILKKLSSMAVMYLENNQLRGPIPSLVG---SLEFFSAYEANISGTIPDFIGTDTF--- 167
+ L + + +E+N + G ++ +L++ S + S + +TF
Sbjct: 322 DFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRT---LTNETFVSL 378
Query: 168 --PQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPK 225
L L+L N + +F S L LE L LG N++ +
Sbjct: 379 AHSPLHILNLTKNKISKIESDAF-------SWLGHLEVLDLGLNEIGQELTGQEWRGLEN 431
Query: 226 LTTLNLTNNLLQGPTPRF--NNSKLTV 250
+ + L+ N T L
Sbjct: 432 IFEIYLSYNKYLQLTRNSFALVPSLQR 458
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 85.8 bits (213), Expect = 1e-17
Identities = 33/144 (22%), Positives = 51/144 (35%), Gaps = 17/144 (11%)
Query: 112 TVPPILKKLSSMAVMYLENNQLRGPIPSLVG---SLEFFSAYEANISGTIPDFIGTDTFP 168
VP L +++ V+ L +NQLR + L IS P+ P
Sbjct: 18 QVPDDL--PTNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQK--LP 73
Query: 169 QLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTT 228
L L+L +N L +F + + L +L L N + I + F L T
Sbjct: 74 MLKVLNLQHNELSQLSDKTF-------AFCTNLTELHLMSNSIQKIKN-NPFVKQKNLIT 125
Query: 229 LNLTNNLLQGPTPR--FNNSKLTV 250
L+L++N L L
Sbjct: 126 LDLSHNGLSSTKLGTQVQLENLQE 149
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 85.1 bits (211), Expect = 2e-17
Identities = 23/142 (16%), Positives = 45/142 (31%), Gaps = 13/142 (9%)
Query: 114 PPILKKLSSMAVMYLENNQLRGPIPSLVG---SLEFFSAYEANISGTIPDFIGTDTFPQL 170
K ++ + L +N L +L+ I + + L
Sbjct: 114 NNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSL 173
Query: 171 SYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFP--VSSFNNHPKLTT 228
L+L +N ++ P F + L L L + +L + + +
Sbjct: 174 KKLELSSNQIKEFSPGCF-------HAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRN 226
Query: 229 LNLTNNLLQGPTPR-FNNSKLT 249
L+L+N+ L + F K T
Sbjct: 227 LSLSNSQLSTTSNTTFLGLKWT 248
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 77.3 bits (191), Expect = 5e-15
Identities = 26/132 (19%), Positives = 47/132 (35%), Gaps = 8/132 (6%)
Query: 119 KLSSMAVMYLENNQLRGPIPSLVG---SLEFFSAYEANISGTIPDFIGTDTFPQLSYLDL 175
K +++ ++ L N L LE+F NI + + YL+L
Sbjct: 246 KWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHG--LFNVRYLNL 303
Query: 176 GNNNLQGTIPSSF--GMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTN 233
+ + +I + + L LE L++ N + GI + F L L+L+N
Sbjct: 304 KRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPGIKS-NMFTGLINLKYLSLSN 362
Query: 234 NLLQGPTPRFNN 245
+ T
Sbjct: 363 SFTSLRTLTNET 374
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 75.8 bits (187), Expect = 2e-14
Identities = 33/164 (20%), Positives = 49/164 (29%), Gaps = 36/164 (21%)
Query: 103 ELQDQNRKGTVPPILKKLSSMAVMYLENNQLRGPIPSLVGSLEFFSAYEANISGTIPDFI 162
L G LK LS + ++ LE+N + L
Sbjct: 518 RLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDL------------------ 559
Query: 163 GTDTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNN 222
+L +DLG NNL S F N +L+ L+L N +T +
Sbjct: 560 -----FELKIIDLGLNNLNTLPASVFN-------NQVSLKSLNLQKNLITSVEKKVFGPA 607
Query: 223 HPKLTTLNLTNNLLQGPTP------RFNNSKLTVDMRTGSNCFC 260
LT L++ N + N T S+ C
Sbjct: 608 FRNLTELDMRFNPFDCTCESIAWFVNWINETHTNIPELSSHYLC 651
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 75.4 bits (186), Expect = 2e-14
Identities = 25/132 (18%), Positives = 42/132 (31%), Gaps = 18/132 (13%)
Query: 127 YLENNQLRGPIPSL---VGSLEFFSAYEANISGTIPD--FIGTDTFPQLSYLDLGNNNLQ 181
L N++ +G LE I + + G + + L N
Sbjct: 387 NLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELTGQEWRG---LENIFEIYLSYNKYL 443
Query: 182 GTIPSSFGMPFADISNLSTLEDLSLGHNKLTGI-FPVSSFNNHPKLTTLNLTNNLLQGPT 240
+SF + + +L+ L L L + S F LT L+L+NN +
Sbjct: 444 QLTRNSF-------ALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANIN 496
Query: 241 PRF--NNSKLTV 250
KL +
Sbjct: 497 DDMLEGLEKLEI 508
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 73.9 bits (182), Expect = 7e-14
Identities = 29/140 (20%), Positives = 43/140 (30%), Gaps = 21/140 (15%)
Query: 114 PPILKKLSSMAVMYLENNQLRGPIPSL---VGSLEFFSAYEANISG--TIPDFIGTDTFP 168
+ L ++ +YL N+ + V SL+ + + P
Sbjct: 423 GQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQP--LR 480
Query: 169 QLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGI-------FPVSSFN 221
L+ LDL NNN+ L LE L L HN L + P+
Sbjct: 481 NLTILDLSNNNIANINDDMLE-------GLEKLEILDLQHNNLARLWKHANPGGPIYFLK 533
Query: 222 NHPKLTTLNLTNNLLQGPTP 241
L LNL +N
Sbjct: 534 GLSHLHILNLESNGFDEIPV 553
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 63.9 bits (156), Expect = 9e-11
Identities = 21/99 (21%), Positives = 34/99 (34%), Gaps = 19/99 (19%)
Query: 169 QLSYLDLGNNNLQGTIPSSF---------------GMPFADISNLSTLEDLSLGHNKLTG 213
D + L +P +P A+ + S L L +G N ++
Sbjct: 5 SHEVADCSHLKLT-QVPDDLPTNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISK 63
Query: 214 IFPVSSFNNHPKLTTLNLTNNLLQGPTPR-FNN-SKLTV 250
+ P P L LNL +N L + + F + LT
Sbjct: 64 LEP-ELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTE 101
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} Length = 347 | Back alignment and structure |
|---|
Score = 80.3 bits (199), Expect = 2e-16
Identities = 25/145 (17%), Positives = 53/145 (36%), Gaps = 19/145 (13%)
Query: 108 NRKGTVPPILKKLSSMAVMYLENNQLRGPIPSLVG--SLEFFSAYEANISGTIPDFIGTD 165
N + L ++ + + + ++++ + + L S I I
Sbjct: 142 NHNLSDLSPLSNMTGLNYLTVTESKVKD-VTPIANLTDLYSLSLNYNQIED-ISPL---A 196
Query: 166 TFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPK 225
+ L Y N + P ++N++ L L +G+NK+T + S N +
Sbjct: 197 SLTSLHYFTAYVNQITDITP---------VANMTRLNSLKIGNNKITDL---SPLANLSQ 244
Query: 226 LTTLNLTNNLLQGPTPRFNNSKLTV 250
LT L + N + + +KL +
Sbjct: 245 LTWLEIGTNQISDINAVKDLTKLKM 269
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} Length = 347 | Back alignment and structure |
|---|
Score = 74.5 bits (184), Expect = 1e-14
Identities = 30/140 (21%), Positives = 54/140 (38%), Gaps = 17/140 (12%)
Query: 112 TVPPILKKLSSMAVMYLENNQLRGPIPSLVG--SLEFFSAYEANISGTIPDFIGTDTFPQ 169
T + ++ + + + NN++ + L L + IS I +
Sbjct: 212 TDITPVANMTRLNSLKIGNNKITD-LSPLANLSQLTWLEIGTNQIS-DINAV---KDLTK 266
Query: 170 LSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTL 229
L L++G+N + I ++NLS L L L +N+L + LTTL
Sbjct: 267 LKMLNVGSNQISD-ISV--------LNNLSQLNSLFLNNNQLGNE-DMEVIGGLTNLTTL 316
Query: 230 NLTNNLLQGPTPRFNNSKLT 249
L+ N + P + SK+
Sbjct: 317 FLSQNHITDIRPLASLSKMD 336
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} Length = 347 | Back alignment and structure |
|---|
Score = 74.1 bits (183), Expect = 2e-14
Identities = 31/155 (20%), Positives = 63/155 (40%), Gaps = 20/155 (12%)
Query: 98 QVTNIELQDQNRKGTVPPILKKLSSMAVMYLENNQLRGPIPSLVG--SLEFFSAYEANIS 155
+ + L N+ + P L L + +Y+ N++ I +L +L E NIS
Sbjct: 67 NLEYLNLNG-NQITDISP-LSNLVKLTNLYIGTNKITD-ISALQNLTNLRELYLNEDNIS 123
Query: 156 GTIPDFIGTDTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIF 215
I ++ L+LG N+ + +SN++ L L++ +K+ +
Sbjct: 124 D-ISPL---ANLTKMYSLNLGANHNLSDLSP--------LSNMTGLNYLTVTESKVKDV- 170
Query: 216 PVSSFNNHPKLTTLNLTNNLLQGPTPRFNNSKLTV 250
+ N L +L+L N ++ +P + + L
Sbjct: 171 --TPIANLTDLYSLSLNYNQIEDISPLASLTSLHY 203
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} Length = 347 | Back alignment and structure |
|---|
Score = 69.1 bits (170), Expect = 8e-13
Identities = 27/123 (21%), Positives = 46/123 (37%), Gaps = 17/123 (13%)
Query: 117 LKKLSSMAVMYLENNQLRGPIPSLVG--SLEFFSAYEANISGTIPDFIGTDTFPQLSYLD 174
L LS + + + NQ+ I ++ L+ + IS I + QL+ L
Sbjct: 239 LANLSQLTWLEIGTNQISD-INAVKDLTKLKMLNVGSNQISD-ISVL---NNLSQLNSLF 293
Query: 175 LGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNN 234
L NN L G L+ L L L N +T I + K+ + + N
Sbjct: 294 LNNNQLGNEDMEVIG-------GLTNLTTLFLSQNHITDI---RPLASLSKMDSADFANQ 343
Query: 235 LLQ 237
+++
Sbjct: 344 VIK 346
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} Length = 347 | Back alignment and structure |
|---|
Score = 65.3 bits (160), Expect = 1e-11
Identities = 33/152 (21%), Positives = 60/152 (39%), Gaps = 20/152 (13%)
Query: 102 IELQDQNRKGTVPPILKKLSSMAVMYLENNQLRGPIPSLVG--SLEFFSAYEANISGTIP 159
I Q T ++L S+ + + ++ I + +LE+ + I+ I
Sbjct: 25 IRAVLQKASVTDVVTQEELESITKLVVAGEKVAS-IQGIEYLTNLEYLNLNGNQITD-IS 82
Query: 160 DFIGTDTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSS 219
+L+ L +G N + T S+ NL+ L +L L + ++ I S
Sbjct: 83 PLSN---LVKLTNLYIGTNKI--TDISAL-------QNLTNLRELYLNEDNISDI---SP 127
Query: 220 FNNHPKLTTLNL-TNNLLQGPTPRFNNSKLTV 250
N K+ +LNL N+ L +P N + L
Sbjct: 128 LANLTKMYSLNLGANHNLSDLSPLSNMTGLNY 159
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} Length = 347 | Back alignment and structure |
|---|
Score = 60.2 bits (147), Expect = 6e-10
Identities = 22/134 (16%), Positives = 41/134 (30%), Gaps = 37/134 (27%)
Query: 117 LKKLSSMAVMYLENNQLRGPIPSLVGSLEFFSAYEANISGTIPDFIGTDTFPQLSYLDLG 176
L+ L+ + + ++ L +
Sbjct: 18 DADLAEGIRAVLQKASVTDVVT---------------QEE----------LESITKLVVA 52
Query: 177 NNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNNLL 236
+ +I I L+ LE L+L N++T I P+S+ KLT L + N +
Sbjct: 53 GEKVA-SIQ--------GIEYLTNLEYLNLNGNQITDISPLSNL---VKLTNLYIGTNKI 100
Query: 237 QGPTPRFNNSKLTV 250
+ N + L
Sbjct: 101 TDISALQNLTNLRE 114
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} Length = 347 | Back alignment and structure |
|---|
Score = 59.5 bits (145), Expect = 1e-09
Identities = 17/93 (18%), Positives = 28/93 (30%), Gaps = 12/93 (12%)
Query: 158 IPDFIGTDTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPV 217
I + L ++ + L ++ L + K+ I +
Sbjct: 12 INQIFPDADLAEGIRAVLQKASVTDVVT---------QEELESITKLVVAGEKVASIQGI 62
Query: 218 SSFNNHPKLTTLNLTNNLLQGPTPRFNNSKLTV 250
N L LNL N + +P N KLT
Sbjct: 63 EYLTN---LEYLNLNGNQITDISPLSNLVKLTN 92
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 79.7 bits (197), Expect = 9e-16
Identities = 24/150 (16%), Positives = 47/150 (31%), Gaps = 17/150 (11%)
Query: 108 NRKGTVPPILKKLSSMAVMYLENNQLRGPIPSLV----GSLEFFSAYEANISGTIPD-FI 162
N + L + + +++ L+ L + N F+
Sbjct: 386 NGAIIMSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFL 445
Query: 163 GTDTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNN 222
G L+ L + N+ + S+ +N + L L L +L I F+
Sbjct: 446 G---LTSLNTLKMAGNSFKDNTLSNV------FANTTNLTFLDLSKCQLEQI-SWGVFDT 495
Query: 223 HPKLTTLNLTNNLLQGPTPRF--NNSKLTV 250
+L LN+++N L L+
Sbjct: 496 LHRLQLLNMSHNNLLFLDSSHYNQLYSLST 525
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 77.0 bits (190), Expect = 6e-15
Identities = 26/154 (16%), Positives = 50/154 (32%), Gaps = 24/154 (15%)
Query: 108 NRKGTVPPI--LKKLSSMAVMYLENNQLRGPIPSLVG---SLEFFSAYEANISG-TIPDF 161
+ V L + + + + + SL ++G + D
Sbjct: 409 STLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTL-----KMAGNSFKDN 463
Query: 162 IGTDTF---PQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVS 218
++ F L++LDL L+ F L L+ L++ HN L + S
Sbjct: 464 TLSNVFANTTNLTFLDLSKCQLEQISWGVF-------DTLHRLQLLNMSHNNLLFL-DSS 515
Query: 219 SFNNHPKLTTLNLTNNLLQGPTPRF--NNSKLTV 250
+N L+TL+ + N ++ L
Sbjct: 516 HYNQLYSLSTLDCSFNRIETSKGILQHFPKSLAF 549
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 74.3 bits (183), Expect = 5e-14
Identities = 23/125 (18%), Positives = 45/125 (36%), Gaps = 10/125 (8%)
Query: 119 KLSSMAVMYLENNQLRGPIPSLVG--SLEFFSAYEANISGTIPDFIGTDTFPQLSYLDLG 176
+S+ + L N + +G L+ + + + +F + +L YLD+
Sbjct: 374 GTNSLRHLDLSFNGAIIMSANFMGLEELQHLDFQHSTLKR-VTEFSAFLSLEKLLYLDIS 432
Query: 177 NNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNNLL 236
N + F L++L L + N + F N LT L+L+ L
Sbjct: 433 YTNTKIDFDGIF-------LGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQL 485
Query: 237 QGPTP 241
+ +
Sbjct: 486 EQISW 490
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 73.9 bits (182), Expect = 7e-14
Identities = 23/134 (17%), Positives = 45/134 (33%), Gaps = 11/134 (8%)
Query: 120 LSSMAVMYLENNQLRGPIPSL-VGSLEFFSAYEANISGTIPDFIGTDTFPQLSYLDLGNN 178
L + + L N+ + + SL + +S + L +LDL N
Sbjct: 327 LPFLKSLTLTMNKGSISFKKVALPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFN 386
Query: 179 NLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNNLLQG 238
+ ++F L L+ L H+ L + S+F + KL L+++ +
Sbjct: 387 GAI-IMSANF-------MGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKI 438
Query: 239 PTPRF--NNSKLTV 250
+ L
Sbjct: 439 DFDGIFLGLTSLNT 452
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 72.4 bits (178), Expect = 2e-13
Identities = 25/96 (26%), Positives = 39/96 (40%), Gaps = 14/96 (14%)
Query: 157 TIPDFIGTDTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFP 216
+PD I +DL N L+ SF SN S L+ L L ++ I
Sbjct: 25 KVPDDI----PSSTKNIDLSFNPLKILKSYSF-------SNFSELQWLDLSRCEIETIED 73
Query: 217 VSSFNNHPKLTTLNLTNNLLQGPTPR-FNN-SKLTV 250
+++ L+ L LT N +Q +P F+ + L
Sbjct: 74 -KAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLEN 108
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 70.8 bits (174), Expect = 5e-13
Identities = 22/131 (16%), Positives = 37/131 (28%), Gaps = 12/131 (9%)
Query: 114 PPILKKLSSMAVMYLENNQLRGPIPSL---VGSLEFFSAYEANISGTIPDFIGTDTFPQL 170
S + + L ++ + L I P L
Sbjct: 49 SYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSG--LTSL 106
Query: 171 SYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLN 230
L L G L TL+ L++ HN + + F+N L ++
Sbjct: 107 ENLVAVETKLASLESFPIG-------QLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVD 159
Query: 231 LTNNLLQGPTP 241
L+ N +Q T
Sbjct: 160 LSYNYIQTITV 170
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 68.1 bits (167), Expect = 4e-12
Identities = 21/130 (16%), Positives = 41/130 (31%), Gaps = 31/130 (23%)
Query: 107 QNRKGTVPPILKKLSSMAVMYLENNQLRGPIPSLVGSLEFFSAYEANISGTIPDFIGTDT 166
+ T+ + +++ + L QL + +L
Sbjct: 459 SFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTL---------------------- 496
Query: 167 FPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKL 226
+L L++ +NNL S + + L +L L N++ + L
Sbjct: 497 -HRLQLLNMSHNNLLFLDSSHY-------NQLYSLSTLDCSFNRIETSKG-ILQHFPKSL 547
Query: 227 TTLNLTNNLL 236
NLTNN +
Sbjct: 548 AFFNLTNNSV 557
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 64.3 bits (157), Expect = 6e-11
Identities = 21/137 (15%), Positives = 42/137 (30%), Gaps = 16/137 (11%)
Query: 117 LKKLSSMAVMYLENNQLRGPIPSLVGSLEFFSAYEANISGTIPDFIGTDTF---PQLSYL 173
L + + + L PS++ L + E ++ T F +S +
Sbjct: 231 LHVHRLILGEFKDERNLEIFEPSIMEGLCDVTIDEFRLTYTNDFSDDIVKFHCLANVSAM 290
Query: 174 DLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTN 233
L +++ D+ + LS+ +L + P L +L LT
Sbjct: 291 SLAGVSIKY---------LEDVPKHFKWQSLSIIRCQLKQF----PTLDLPFLKSLTLTM 337
Query: 234 NLLQGPTPRFNNSKLTV 250
N + L+
Sbjct: 338 NKGSISFKKVALPSLSY 354
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 52.0 bits (125), Expect = 4e-07
Identities = 17/133 (12%), Positives = 39/133 (29%), Gaps = 18/133 (13%)
Query: 114 PPILKKLSSMAVMYLENNQLRG-PIPSLVGSLE-----FFSAYEANISGTIPDFIG--TD 165
+ +L ++ + + +N + +P+ +L S I + + +
Sbjct: 121 SFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYN--YIQTITVNDLQFLRE 178
Query: 166 TFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPK 225
LD+ N + +F L +L+L N + + N
Sbjct: 179 NPQVNLSLDMSLNPIDFIQDQAF--------QGIKLHELTLRGNFNSSNIMKTCLQNLAG 230
Query: 226 LTTLNLTNNLLQG 238
L L +
Sbjct: 231 LHVHRLILGEFKD 243
|
| >3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301 | Back alignment and structure |
|---|
Score = 77.0 bits (190), Expect = 1e-15
Identities = 39/249 (15%), Positives = 74/249 (29%), Gaps = 89/249 (35%)
Query: 423 ENRLGRGGVGTVYKGELKDGTEVGVKRMELGSVTEQGIAQFESEITVLTK---------- 472
+G+G G V++G + G V VK E+E+
Sbjct: 13 LECVGKGRYGEVWRGSWQ-GENVAVKIFSSRDEKS---WFRETELYNTVMLRHENILGFI 68
Query: 473 ----------------------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG----- 505
G+L +L L+ + L I L +A G
Sbjct: 69 ASDMTSRHSSTQLWLITHYHEMGSLYDYLQL------TTLDTVSCLRIVLSIASGLAHLH 122
Query: 506 -------------------------DDMR--VADFGLVRLVPENGKHSIL--TKVAGTFG 536
+ + +AD GL + ++ + GT
Sbjct: 123 IEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKR 182
Query: 537 YLAPE------YIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQK 590
Y+APE + +VD+++FG++L ++ + + +Y F
Sbjct: 183 YMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARR---MVSNGIVEDYKPP----FYD 235
Query: 591 MHKNHDTFQ 599
+ N +F+
Sbjct: 236 VVPNDPSFE 244
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A Length = 466 | Back alignment and structure |
|---|
Score = 78.9 bits (195), Expect = 1e-15
Identities = 33/140 (23%), Positives = 57/140 (40%), Gaps = 19/140 (13%)
Query: 112 TVPPILKKLSSMAVMYLENNQLRGPIPSLVG--SLEFFSAYEANISGTIPDFIGTDTFPQ 169
+ L L+ + + L NQ+ I L G +L E + D
Sbjct: 256 SNLAPLSGLTKLTELKLGANQISN-ISPLAGLTALTNLELNENQLE----DISPISNLKN 310
Query: 170 LSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTL 229
L+YL L NN+ P +S+L+ L+ L +NK++ + SS N + L
Sbjct: 311 LTYLTLYFNNISDISP---------VSSLTKLQRLFFYNNKVSDV---SSLANLTNINWL 358
Query: 230 NLTNNLLQGPTPRFNNSKLT 249
+ +N + TP N +++T
Sbjct: 359 SAGHNQISDLTPLANLTRIT 378
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A Length = 466 | Back alignment and structure |
|---|
Score = 76.9 bits (190), Expect = 5e-15
Identities = 37/141 (26%), Positives = 59/141 (41%), Gaps = 19/141 (13%)
Query: 112 TVPPILKKLSSMAVMYLENNQLRG--PIPSLVGSLEFFSAYEANISGTIPDFIGTDTFPQ 169
+ +L KL+++ + NNQ+ P+ L +L+ S + I +
Sbjct: 190 SDISVLAKLTNLESLIATNNQISDITPLGILT-NLDELSLNGNQLKD-IGTL---ASLTN 244
Query: 170 LSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTL 229
L+ LDL NN + P +S L+ L +L LG N+++ I S LT L
Sbjct: 245 LTDLDLANNQISNLAP---------LSGLTKLTELKLGANQISNI---SPLAGLTALTNL 292
Query: 230 NLTNNLLQGPTPRFNNSKLTV 250
L N L+ +P N LT
Sbjct: 293 ELNENQLEDISPISNLKNLTY 313
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A Length = 466 | Back alignment and structure |
|---|
Score = 74.2 bits (183), Expect = 3e-14
Identities = 35/141 (24%), Positives = 53/141 (37%), Gaps = 19/141 (13%)
Query: 112 TVPPILKKLSSMAVMYLENNQLRGPIPSLVG--SLEFFSAYEANISGTIPDFIGTDTFPQ 169
L L+++ + L NNQ+ + L G L IS I G
Sbjct: 234 KDIGTLASLTNLTDLDLANNQISN-LAPLSGLTKLTELKLGANQISN-ISPLAG---LTA 288
Query: 170 LSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTL 229
L+ L+L N L+ P ISNL L L+L N ++ I S ++ KL L
Sbjct: 289 LTNLELNENQLEDISP---------ISNLKNLTYLTLYFNNISDI---SPVSSLTKLQRL 336
Query: 230 NLTNNLLQGPTPRFNNSKLTV 250
NN + + N + +
Sbjct: 337 FFYNNKVSDVSSLANLTNINW 357
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A Length = 466 | Back alignment and structure |
|---|
Score = 72.3 bits (178), Expect = 1e-13
Identities = 32/140 (22%), Positives = 57/140 (40%), Gaps = 20/140 (14%)
Query: 112 TVPPILKKLSSMAVMYLENNQLRGPIPSLVG--SLEFFSAYEANISGTIPDFIGTDTFPQ 169
T LK L+++ + L +N + I +L G SL+ + + D
Sbjct: 125 TDIDPLKNLTNLNRLELSSNTISD-ISALSGLTSLQQL-----SFGNQVTDLKPLANLTT 178
Query: 170 LSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTL 229
L LD+ +N + I ++ L+ LE L +N+++ I P+ N L L
Sbjct: 179 LERLDISSNKVSD-ISV--------LAKLTNLESLIATNNQISDITPLGILTN---LDEL 226
Query: 230 NLTNNLLQGPTPRFNNSKLT 249
+L N L+ + + LT
Sbjct: 227 SLNGNQLKDIGTLASLTNLT 246
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A Length = 466 | Back alignment and structure |
|---|
Score = 69.2 bits (170), Expect = 1e-12
Identities = 27/135 (20%), Positives = 49/135 (36%), Gaps = 17/135 (12%)
Query: 117 LKKLSSMAVMYLENNQLRGPIP-SLVGSLEFFSAYEANISGTIPDFIGTDTFPQLSYLDL 175
L+ L + + + + + A I D + L+ ++
Sbjct: 20 DTALAEKMKTVLGKTNVTDTVSQTDLDQVTTLQADRLGI--KSIDGVEY--LNNLTQINF 75
Query: 176 GNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNNL 235
NN L P + NL+ L D+ + +N++ I P+++ N LT L L NN
Sbjct: 76 SNNQLTDITP---------LKNLTKLVDILMNNNQIADITPLANLTN---LTGLTLFNNQ 123
Query: 236 LQGPTPRFNNSKLTV 250
+ P N + L
Sbjct: 124 ITDIDPLKNLTNLNR 138
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A Length = 466 | Back alignment and structure |
|---|
Score = 66.9 bits (164), Expect = 6e-12
Identities = 24/139 (17%), Positives = 45/139 (32%), Gaps = 15/139 (10%)
Query: 112 TVPPILKKLSSMAVMYLENNQLRGPIP-SLVGSLEFFSAYEANISGTIPDFIGTDTFPQL 170
+ L ++ + L N + P S + L+ Y +S + +
Sbjct: 300 EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSD-VSSL---ANLTNI 355
Query: 171 SYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLN 230
++L G+N + P ++NL+ + L L T PV+ N T+
Sbjct: 356 NWLSAGHNQISDLTP---------LANLTRITQLGLNDQAWTNA-PVNYKANVSIPNTVK 405
Query: 231 LTNNLLQGPTPRFNNSKLT 249
L P + T
Sbjct: 406 NVTGALIAPATISDGGSYT 424
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A Length = 466 | Back alignment and structure |
|---|
Score = 63.8 bits (156), Expect = 6e-11
Identities = 29/138 (21%), Positives = 58/138 (42%), Gaps = 20/138 (14%)
Query: 115 PILKKLSSMAVMYLENNQLRG--PIPSLVGSLEFFSAYEANISGTIPDFIGTDTFPQLSY 172
LK L+ + + + NNQ+ P+ +L +L + + I+ I L+
Sbjct: 84 TPLKNLTKLVDILMNNNQIADITPLANLT-NLTGLTLFNNQITD-IDPL---KNLTNLNR 138
Query: 173 LDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLT 232
L+L +N + +S L++L+ LS G N++T + P N L L+++
Sbjct: 139 LELSSNTISDISA---------LSGLTSLQQLSFG-NQVTDLKP---LANLTTLERLDIS 185
Query: 233 NNLLQGPTPRFNNSKLTV 250
+N + + + L
Sbjct: 186 SNKVSDISVLAKLTNLES 203
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A Length = 466 | Back alignment and structure |
|---|
Score = 58.1 bits (141), Expect = 5e-09
Identities = 22/93 (23%), Positives = 32/93 (34%), Gaps = 12/93 (12%)
Query: 158 IPDFIGTDTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPV 217
I + LG N+ T+ ++L + L + I V
Sbjct: 14 INQIFTDTALAEKMKTVLGKTNVTDTVS---------QTDLDQVTTLQADRLGIKSIDGV 64
Query: 218 SSFNNHPKLTTLNLTNNLLQGPTPRFNNSKLTV 250
NN LT +N +NN L TP N +KL
Sbjct: 65 EYLNN---LTQINFSNNQLTDITPLKNLTKLVD 94
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A Length = 466 | Back alignment and structure |
|---|
Score = 48.4 bits (116), Expect = 5e-06
Identities = 16/129 (12%), Positives = 42/129 (32%), Gaps = 16/129 (12%)
Query: 112 TVPPILKKLSSMAVMYLENNQLRGPIP-SLVGSLEFFSAYEANISGTIPDFIGTDTFPQL 170
+ L L+++ + +NQ+ P + + + + + ++ +
Sbjct: 344 SDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWTNAPVNY-----KANV 398
Query: 171 SYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVS-SFNNHPKLTTL 229
S + N I + IS+ + + + N + VS +F+ + T+
Sbjct: 399 SIPNTVKNVTGALIAPA------TISDGGSYTEPDITWNLPSYTNEVSYTFS---QPVTI 449
Query: 230 NLTNNLLQG 238
G
Sbjct: 450 GKGTTTFSG 458
|
| >3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337 | Back alignment and structure |
|---|
Score = 77.5 bits (191), Expect = 1e-15
Identities = 35/218 (16%), Positives = 61/218 (27%), Gaps = 84/218 (38%)
Query: 423 ENRLGRGGVGTVYKGELKDGTEVGVKRMELGSVTEQGIAQFESEITVLTK---------- 472
++G+G G V+ G+ + G +V VK E+EI
Sbjct: 42 VKQIGKGRYGEVWMGKWR-GEKVAVKVFFTTEEASW---FRETEIYQTVLMRHENILGFI 97
Query: 473 ----------------------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG----- 505
G+L +L + L+ + L +A G
Sbjct: 98 AADIKGTGSWTQLYLITDYHENGSLYDYLKS------TTLDAKSMLKLAYSSVSGLCHLH 151
Query: 506 -------------------------DDMR--VADFGLVRLVPENGKHSIL--TKVAGTFG 536
+ +AD GL + + GT
Sbjct: 152 TEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKR 211
Query: 537 YLAPEYIVTGRITA-------KVDVYSFGMILMDLITG 567
Y+ PE ++ + D+YSFG+IL ++
Sbjct: 212 YMPPE-VLDESLNRNHFQSYIMADMYSFGLILWEVARR 248
|
| >1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* Length = 330 | Back alignment and structure |
|---|
Score = 74.7 bits (184), Expect = 1e-14
Identities = 35/152 (23%), Positives = 58/152 (38%), Gaps = 20/152 (13%)
Query: 106 DQNRKGTVPP-ILKKLSSMAVMYLENNQLR-GPIPSLV----GSLEFFSAYEANISGTIP 159
+N V + L+ M V+ L N L+ I + L + + NI+ TIP
Sbjct: 129 HENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNIT-TIP 187
Query: 160 DFIGTDTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSS 219
P L+ L L N + + ++ + L+ L L L N ++ + S
Sbjct: 188 Q----GLPPSLTELHLDGNKIT-KVDAA------SLKGLNNLAKLGLSFNSISAV-DNGS 235
Query: 220 FNNHPKLTTLNLTNNLLQGPTPRF-NNSKLTV 250
N P L L+L NN L ++ + V
Sbjct: 236 LANTPHLRELHLNNNKLVKVPGGLADHKYIQV 267
|
| >1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* Length = 330 | Back alignment and structure |
|---|
Score = 65.8 bits (161), Expect = 8e-12
Identities = 21/124 (16%), Positives = 43/124 (34%), Gaps = 17/124 (13%)
Query: 117 LKKLSSMAVMYLENNQLRGPIPSLVGSLEFFSAYEANISGTIPDFIGTDTF---PQLSYL 173
+ + ++ + + + + L SL I+ + + L+ L
Sbjct: 167 FQGMKKLSYIRIADTNITTIPQGLPPSLTELHLDGNKIT-----KVDAASLKGLNNLAKL 221
Query: 174 DLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTN 233
L N++ S +N L +L L +NKL + P +H + + L N
Sbjct: 222 GLSFNSISAVDNGSL-------ANTPHLRELHLNNNKLVKV-P-GGLADHKYIQVVYLHN 272
Query: 234 NLLQ 237
N +
Sbjct: 273 NNIS 276
|
| >1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* Length = 330 | Back alignment and structure |
|---|
Score = 61.6 bits (150), Expect = 2e-10
Identities = 24/141 (17%), Positives = 47/141 (33%), Gaps = 43/141 (30%)
Query: 106 DQNRKGTVPP-ILKKLSSMAVMYLENNQLRGPIPSLVGSLEFFSAYEANISGTIPDFIGT 164
D N+ V LK L+++A + L N + + +
Sbjct: 200 DGNKITKVDAASLKGLNNLAKLGLSFNSIS----------------------AVDN---- 233
Query: 165 DTF---PQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGI-----FP 216
+ P L L L NN L +P ++ ++ + L +N ++ I P
Sbjct: 234 GSLANTPHLRELHLNNNKLV-KVPGGL-------ADHKYIQVVYLHNNNISAIGSNDFCP 285
Query: 217 VSSFNNHPKLTTLNLTNNLLQ 237
+ ++L +N +Q
Sbjct: 286 PGYNTKKASYSGVSLFSNPVQ 306
|
| >1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* Length = 330 | Back alignment and structure |
|---|
Score = 57.7 bits (140), Expect = 4e-09
Identities = 24/81 (29%), Positives = 34/81 (41%), Gaps = 12/81 (14%)
Query: 157 TIPDFIGTDTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFP 216
+P + DT + LDL NN + F NL L L L +NK++ I
Sbjct: 45 KVPKDLPPDT----ALLDLQNNKITEIKDGDF-------KNLKNLHTLILINNKISKI-S 92
Query: 217 VSSFNNHPKLTTLNLTNNLLQ 237
+F KL L L+ N L+
Sbjct: 93 PGAFAPLVKLERLYLSKNQLK 113
|
| >1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* Length = 330 | Back alignment and structure |
|---|
Score = 56.9 bits (138), Expect = 7e-09
Identities = 35/166 (21%), Positives = 58/166 (34%), Gaps = 52/166 (31%)
Query: 86 CQWSHVICSDDG----------QVTNIELQDQNRKGTVPP-ILKKLSSMAVMYLENNQLR 134
C V CSD G ++LQ+ N+ + K L ++ + L NN++
Sbjct: 31 CHLRVVQCSDLGLEKVPKDLPPDTALLDLQN-NKITEIKDGDFKNLKNLHTLILINNKIS 89
Query: 135 GPIPSLVGSLEFFSAYEANISGTIPDFIGTDTF---PQLSYLDLGNNNLQGTIPSSFGMP 191
I F +L L L N L+ +P MP
Sbjct: 90 --------------------------KISPGAFAPLVKLERLYLSKNQLK-ELPE--KMP 120
Query: 192 FADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNNLLQ 237
TL++L + N++T + S FN ++ + L N L+
Sbjct: 121 -------KTLQELRVHENEITKV-RKSVFNGLNQMIVVELGTNPLK 158
|
| >1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* Length = 330 | Back alignment and structure |
|---|
Score = 45.8 bits (109), Expect = 2e-05
Identities = 21/107 (19%), Positives = 33/107 (30%), Gaps = 26/107 (24%)
Query: 106 DQNRKGTVPPILKKLSSMAVMYLENNQLRGPIPSLVGSLEFFSAYEANISGTIPDFIGTD 165
+ N+ VP L + V+YL NN + I S
Sbjct: 248 NNNKLVKVPGGLADHKYIQVVYLHNNNISA-IGS----------------NDFCPPGYNT 290
Query: 166 TFPQLSYLDLGNNNLQGTI--PSSFGMPFADISNLSTLEDLSLGHNK 210
S + L +N +Q PS+F + + LG+ K
Sbjct: 291 KKASYSGVSLFSNPVQYWEIQPSTF-------RCVYVRAAVQLGNYK 330
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 76.2 bits (188), Expect = 1e-14
Identities = 35/154 (22%), Positives = 59/154 (38%), Gaps = 13/154 (8%)
Query: 98 QVTNIELQDQNRKGTVPP-ILKKLSSMAVMYLENNQLRGPIPSLVGSLEFFSA-YEANIS 155
+T++ ++ ++ + L+ L ++ + L ++ + L S N+S
Sbjct: 326 SLTHLSIKGNTKRLELGTGCLENLENLRELDLSHDDIET-SDCCNLQLRNLSHLQSLNLS 384
Query: 156 GTIPDFIGTDTF---PQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLT 212
P + T+ F PQL LDL L+ S NL L+ L+L H+ L
Sbjct: 385 YNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSP------FQNLHLLKVLNLSHSLLD 438
Query: 213 GIFPVSSFNNHPKLTTLNLTNNLLQGPTPRFNNS 246
F+ P L LNL N + NS
Sbjct: 439 ISSE-QLFDGLPALQHLNLQGNHFPKGNIQKTNS 471
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 71.6 bits (176), Expect = 3e-13
Identities = 23/131 (17%), Positives = 45/131 (34%), Gaps = 17/131 (12%)
Query: 114 PPILKKLSSMAVMYLENNQLRGPIPSLVG------SLEFFSAYEANISGTIPDFIGTDTF 167
+ L ++ + L+ N LE ++S +
Sbjct: 442 EQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTS--L 499
Query: 168 PQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLT 227
++++DL +N L + + S+L + L+L N ++ I P S +
Sbjct: 500 KMMNHVDLSHNRLTSSSIEAL-------SHLKGIY-LNLASNHISIILP-SLLPILSQQR 550
Query: 228 TLNLTNNLLQG 238
T+NL N L
Sbjct: 551 TINLRQNPLDC 561
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 71.2 bits (175), Expect = 4e-13
Identities = 26/159 (16%), Positives = 47/159 (29%), Gaps = 17/159 (10%)
Query: 100 TNIELQ-DQNRKGTVPPILKKLSSMAVMYLENNQLRGPIP-----SLVGSLEFFSAYEAN 153
TN+ L + N + P + + Q I S + SL + + +
Sbjct: 180 TNLSLNLNGNDIAGIEPGAFDSAVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMD 239
Query: 154 ISGTIPDFIGTDTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTG 213
P + ++L + ++F S L++L L L+
Sbjct: 240 DEDISPAVFEGLCEMSVESINLQKHYFFNISSNTF-------HCFSGLQELDLTATHLSE 292
Query: 214 IFPVSSFNNHPKLTTLNLTNNLLQGPTPRF--NNSKLTV 250
+ S L L L+ N + N LT
Sbjct: 293 LP--SGLVGLSTLKKLVLSANKFENLCQISASNFPSLTH 329
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 70.0 bits (172), Expect = 9e-13
Identities = 24/143 (16%), Positives = 50/143 (34%), Gaps = 15/143 (10%)
Query: 114 PPILKKLSSMAVMYLENNQLRGPIPSLVG---SLEFFSAYEANISGTIPDFIGT-DTFPQ 169
+ L + V+ L ++ L L +L+ + + + T +
Sbjct: 418 QSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGR 477
Query: 170 LSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTL 229
L L L +L +F ++L + + L HN+LT + + ++ + L
Sbjct: 478 LEILVLSFCDLSSIDQHAF-------TSLKMMNHVDLSHNRLTSS-SIEALSHLKGIY-L 528
Query: 230 NLTNNLLQGPTPRF--NNSKLTV 250
NL +N + P S+
Sbjct: 529 NLASNHISIILPSLLPILSQQRT 551
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 70.0 bits (172), Expect = 9e-13
Identities = 21/96 (21%), Positives = 31/96 (32%), Gaps = 14/96 (14%)
Query: 157 TIPDFIGTDTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFP 216
IP + L+ N L ++F S L L L L ++ I
Sbjct: 26 EIPGTL----PNSTECLEFSFNVLPTIQNTTF-------SRLINLTFLDLTRCQIYWIHE 74
Query: 217 VSSFNNHPKLTTLNLTNNLLQGPTPR-FNN-SKLTV 250
+F + +L TL LT N L + L
Sbjct: 75 -DTFQSQHRLDTLVLTANPLIFMAETALSGPKALKH 109
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 69.7 bits (171), Expect = 1e-12
Identities = 21/132 (15%), Positives = 36/132 (27%), Gaps = 15/132 (11%)
Query: 114 PPILKKLSSMAVMYLENNQLRGPIPSL---VGSLEFFSAYEANISGTIPD-FIGTDTFPQ 169
+L ++ + L Q+ L+ + G
Sbjct: 50 NTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIFMAETALSGP---KA 106
Query: 170 LSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTL 229
L +L + N TLE L LG N ++ I + KL L
Sbjct: 107 LKHLFFIQTGISSIDFIPLH-------NQKTLESLYLGSNHISSI-KLPKGFPTEKLKVL 158
Query: 230 NLTNNLLQGPTP 241
+ NN + +
Sbjct: 159 DFQNNAIHYLSK 170
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 68.5 bits (168), Expect = 3e-12
Identities = 31/157 (19%), Positives = 52/157 (33%), Gaps = 18/157 (11%)
Query: 93 CSDDGQVTNIELQDQNRKGTVPPILK--KLSSMAVMYLENNQLRGPIPSLVG-----SLE 145
D ++ + LK + S+ + E+ P++ S+E
Sbjct: 198 AFDSAVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLCEMSVE 257
Query: 146 FFSAYEANISGTIPDFIGTDTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLS 205
+ + + F L LDL +L +PS LSTL+ L
Sbjct: 258 SINLQKHYFFNISSNTF--HCFSGLQELDLTATHLS-ELPSGL-------VGLSTLKKLV 307
Query: 206 LGHNKLTGIFPVSSFNNHPKLTTLNLTNNLLQGPTPR 242
L NK + S +N P LT L++ N +
Sbjct: 308 LSANKFENL-CQISASNFPSLTHLSIKGNTKRLELGT 343
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 68.5 bits (168), Expect = 3e-12
Identities = 19/118 (16%), Positives = 32/118 (27%), Gaps = 12/118 (10%)
Query: 127 YLENNQLRGPIPSLVGSLEFFSAYEANISGTIP-DFIGTDTFPQLSYLDLGNNNLQGTIP 185
EN L +L S E + F L++LDL +
Sbjct: 18 NCENLGLNEIPGTLPNSTECLEFSFNVLPTIQNTTFSR---LINLTFLDLTRCQIYWIHE 74
Query: 186 SSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNNLLQGPTPRF 243
+F + L+ L L N L + ++ + L L +
Sbjct: 75 DTF-------QSQHRLDTLVLTANPLIFM-AETALSGPKALKHLFFIQTGISSIDFIP 124
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 68.5 bits (168), Expect = 3e-12
Identities = 22/132 (16%), Positives = 37/132 (28%), Gaps = 13/132 (9%)
Query: 117 LKKLSSMAVMYLENNQLRGPIPSL---VGSLEFFSAYEANISGTIPDFIGTDTFPQLSYL 173
L+ LS + + L N+ LE + + L L
Sbjct: 372 LRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQN-LHLLKVL 430
Query: 174 DLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGI--FPVSSFNNHPKLTTLNL 231
+L ++ L + F L L+ L+L N +S +L L L
Sbjct: 431 NLSHSLLDISSEQLF-------DGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVL 483
Query: 232 TNNLLQGPTPRF 243
+ L
Sbjct: 484 SFCDLSSIDQHA 495
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 67.7 bits (166), Expect = 6e-12
Identities = 24/144 (16%), Positives = 48/144 (33%), Gaps = 15/144 (10%)
Query: 100 TNIELQDQNRKGTVPPILKKLSSMAV--MYLENNQLRGPIPSLVG---SLEFFSAYEANI 154
+D + + P + + L M+V + L+ + + L+ ++
Sbjct: 231 WLGTFEDMDDEDISPAVFEGLCEMSVESINLQKHYFFNISSNTFHCFSGLQELDLTATHL 290
Query: 155 SGTIPDFIGTDTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGI 214
S +P + L L L N + S SN +L LS+ N
Sbjct: 291 S-ELPSGLVG--LSTLKKLVLSANKFENLCQISA-------SNFPSLTHLSIKGNTKRLE 340
Query: 215 FPVSSFNNHPKLTTLNLTNNLLQG 238
N L L+L+++ ++
Sbjct: 341 LGTGCLENLENLRELDLSHDDIET 364
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 62.7 bits (153), Expect = 2e-10
Identities = 25/137 (18%), Positives = 47/137 (34%), Gaps = 10/137 (7%)
Query: 117 LKKLSSMAVMYLENNQLRGPIPSLVGSLEFFSAYEA--NISGTIPDFIGTDTFPQLSYLD 174
L++ +++ + L N + G P S F S I + T L
Sbjct: 176 LQQATNL-SLNLNGNDIAGIEPGAFDSAVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGT 234
Query: 175 LGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNN 234
+ + + P+ F + +S +E ++L + I ++F+ L L+LT
Sbjct: 235 FEDMDDEDISPA----VFEGLCEMS-VESINLQKHYFFNISS-NTFHCFSGLQELDLTAT 288
Query: 235 LLQGPTPRFNN-SKLTV 250
L S L
Sbjct: 289 HLSELPSGLVGLSTLKK 305
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 56.6 bits (137), Expect = 2e-08
Identities = 22/141 (15%), Positives = 40/141 (28%), Gaps = 15/141 (10%)
Query: 114 PPILKKLSSMAVMYLENNQLRGPIPSLVG---SLEFFSAYEANISGTIPD-FIGTDTFPQ 169
L ++ ++ + + +LE +IS T +
Sbjct: 98 ETALSGPKALKHLFFIQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPT---EK 154
Query: 170 LSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTL 229
L LD NN + + + L L+L N + GI P + +L
Sbjct: 155 LKVLDFQNNAIHYLSKEDMS----SLQQATNLS-LNLNGNDIAGIEP--GAFDSAVFQSL 207
Query: 230 NLTNNLLQGPTPR-FNNSKLT 249
N + NS +
Sbjct: 208 NFGGTQNLLVIFKGLKNSTIQ 228
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} Length = 317 | Back alignment and structure |
|---|
Score = 72.7 bits (179), Expect = 4e-14
Identities = 27/139 (19%), Positives = 47/139 (33%), Gaps = 14/139 (10%)
Query: 112 TVPPILKKLSSMAVMYLENNQLRGPIPSLVGSLEFFSAYEANISGTIPDFIGTDTFPQLS 171
L+ LS++ + L NN ++ + S+E A NIS +
Sbjct: 71 YETLDLESLSTLRTLDLNNNYVQE-LLVG-PSIETLHAANNNIS-RVSC----SRGQGKK 123
Query: 172 YLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNL 231
+ L NN + G S ++ L L N++ + + L LNL
Sbjct: 124 NIYLANNKITMLRDLDEG-------CRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNL 176
Query: 232 TNNLLQGPTPRFNNSKLTV 250
N + + +KL
Sbjct: 177 QYNFIYDVKGQVVFAKLKT 195
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} Length = 317 | Back alignment and structure |
|---|
Score = 63.9 bits (156), Expect = 3e-11
Identities = 16/83 (19%), Positives = 33/83 (39%), Gaps = 8/83 (9%)
Query: 168 PQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLT 227
+ + +++L+ + S + +++L L N L+ I + KL
Sbjct: 10 NRYKIEKVTDSSLKQALASLR-------QSAWNVKELDLSGNPLSQI-SAADLAPFTKLE 61
Query: 228 TLNLTNNLLQGPTPRFNNSKLTV 250
LNL++N+L + S L
Sbjct: 62 LLNLSSNVLYETLDLESLSTLRT 84
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} Length = 317 | Back alignment and structure |
|---|
Score = 61.9 bits (151), Expect = 1e-10
Identities = 21/158 (13%), Positives = 47/158 (29%), Gaps = 16/158 (10%)
Query: 114 PPILKKLSSMAVMYLENNQLRGPIPSLVG--SLEFFSAYEANISGTIPDFIGTDTFPQLS 171
+ ++ + L+ N + + V L+ ++ + + ++
Sbjct: 162 AELAASSDTLEHLNLQYNFIYD-VKGQVVFAKLKTLDLSSNKLA-FMGPEFQS--AAGVT 217
Query: 172 YLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNL 231
++ L NN L I + LE L N F+ + ++ T+
Sbjct: 218 WISLRNNKLV-LIEKALR-------FSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAK 269
Query: 232 TNNLLQGPTPRFNNSKLTVDMRTGSNCFCLDDPGLACD 269
+ + + G+ C C D P D
Sbjct: 270 -QTVKKLTGQNEEECTVPTLGHYGAYC-CEDLPAPFAD 305
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} Length = 317 | Back alignment and structure |
|---|
Score = 60.4 bits (147), Expect = 5e-10
Identities = 23/122 (18%), Positives = 38/122 (31%), Gaps = 33/122 (27%)
Query: 116 ILKKLSSMAVMYLENNQLRGPIPSLVGSLEFFSAYEANISGTIPDFIGTDTFPQLSYLDL 175
I + + + + ++ L+ + SL S + LDL
Sbjct: 5 IKQNGNRYKIEKVTDSSLKQALASLRQSA-----------------------WNVKELDL 41
Query: 176 GNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNNL 235
N L + + LE L+L N L + L TL+L NN
Sbjct: 42 SGNPLSQISAADLA-------PFTKLELLNLSSNVLYET---LDLESLSTLRTLDLNNNY 91
Query: 236 LQ 237
+Q
Sbjct: 92 VQ 93
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 487 | Back alignment and structure |
|---|
Score = 73.7 bits (181), Expect = 6e-14
Identities = 27/139 (19%), Positives = 47/139 (33%), Gaps = 14/139 (10%)
Query: 112 TVPPILKKLSSMAVMYLENNQLRGPIPSLVGSLEFFSAYEANISGTIPDFIGTDTFPQLS 171
L+ LS++ + L NN ++ + S+E A NIS +
Sbjct: 71 YETLDLESLSTLRTLDLNNNYVQE-LLVG-PSIETLHAANNNIS-RVSC----SRGQGKK 123
Query: 172 YLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNL 231
+ L NN + G S ++ L L N++ + + L LNL
Sbjct: 124 NIYLANNKITMLRDLDEG-------CRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNL 176
Query: 232 TNNLLQGPTPRFNNSKLTV 250
N + + +KL
Sbjct: 177 QYNFIYDVKGQVVFAKLKT 195
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 487 | Back alignment and structure |
|---|
Score = 65.3 bits (159), Expect = 3e-11
Identities = 16/83 (19%), Positives = 33/83 (39%), Gaps = 8/83 (9%)
Query: 168 PQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLT 227
+ + +++L+ + S + +++L L N L+ I + KL
Sbjct: 10 NRYKIEKVTDSSLKQALASLR-------QSAWNVKELDLSGNPLSQI-SAADLAPFTKLE 61
Query: 228 TLNLTNNLLQGPTPRFNNSKLTV 250
LNL++N+L + S L
Sbjct: 62 LLNLSSNVLYETLDLESLSTLRT 84
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 487 | Back alignment and structure |
|---|
Score = 63.3 bits (154), Expect = 1e-10
Identities = 23/122 (18%), Positives = 38/122 (31%), Gaps = 33/122 (27%)
Query: 116 ILKKLSSMAVMYLENNQLRGPIPSLVGSLEFFSAYEANISGTIPDFIGTDTFPQLSYLDL 175
I + + + + ++ L+ + SL S + LDL
Sbjct: 5 IKQNGNRYKIEKVTDSSLKQALASLRQSA-----------------------WNVKELDL 41
Query: 176 GNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNNL 235
N L + + LE L+L N L + L TL+L NN
Sbjct: 42 SGNPLSQISAADLA-------PFTKLELLNLSSNVLYET---LDLESLSTLRTLDLNNNY 91
Query: 236 LQ 237
+Q
Sbjct: 92 VQ 93
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 487 | Back alignment and structure |
|---|
Score = 60.6 bits (147), Expect = 6e-10
Identities = 20/126 (15%), Positives = 40/126 (31%), Gaps = 23/126 (18%)
Query: 114 PPILKKLSSMAVMYLENNQLRGPIPSLVG---SLEFFSAYEANISGTIPDFIGTDTFPQL 170
+ + ++ + L N L + + LE + + D L
Sbjct: 27 ASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLY-ETLDLES---LSTL 82
Query: 171 SYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLN 230
LDL NN +Q ++ ++E L +N ++ + S +
Sbjct: 83 RTLDLNNNYVQ------------ELLVGPSIETLHAANNNISRV-SCSRGQG---KKNIY 126
Query: 231 LTNNLL 236
L NN +
Sbjct: 127 LANNKI 132
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 487 | Back alignment and structure |
|---|
Score = 59.5 bits (144), Expect = 2e-09
Identities = 20/157 (12%), Positives = 46/157 (29%), Gaps = 17/157 (10%)
Query: 106 DQNRKGTVPP--ILKKLSSMAVMYLENNQLRGPIPSLV--GSLEFFSAYEANISGTIPDF 161
N TV + ++ + L+ N + + V L+ ++ +
Sbjct: 152 KLNEIDTVNFAELAASSDTLEHLNLQYNFIYD-VKGQVVFAKLKTLDLSSNKLA-FMGPE 209
Query: 162 IGTDTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFN 221
+ ++++ L NN L I + LE L N F+
Sbjct: 210 FQS--AAGVTWISLRNNKLV-LIEKALR-------FSQNLEHFDLRGNGFHCGTLRDFFS 259
Query: 222 NHPKLTTLNLTNNLLQGPTPRFNNSKLTVDMRTGSNC 258
+ ++ T+ + + + G+ C
Sbjct: 260 KNQRVQTVAK-QTVKKLTGQNEEECTVPTLGHYGAYC 295
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 487 | Back alignment and structure |
|---|
Score = 51.4 bits (123), Expect = 5e-07
Identities = 13/153 (8%), Positives = 31/153 (20%), Gaps = 22/153 (14%)
Query: 106 DQNRKGTVPPILKKLSSMAVMYLENNQLR-GPIPSLVGSLEFFSAYEANISGTIP----- 159
N+ + L+ ++ L N G + + +
Sbjct: 222 RNNKLVLIEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQTVKKLTGQNEE 281
Query: 160 ---------------DFIGTDTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDL 204
+ + +L L + L S + N + ++
Sbjct: 282 ECTVPTLGHYGAYCCEDLPAPFADRLIALKRKEHALLSGQGSETERLECERENQARQREI 341
Query: 205 SLGHNKLTGIFPVSSFNNHPKLTTLNLTNNLLQ 237
+ + TL L
Sbjct: 342 DALKEQYRTV-IDQVTLRKQAKITLEQKKKALD 373
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 487 | Back alignment and structure |
|---|
Score = 47.9 bits (114), Expect = 7e-06
Identities = 15/153 (9%), Positives = 37/153 (24%), Gaps = 16/153 (10%)
Query: 104 LQDQNRKGTVPPILKKLSSMAVMYLENNQLR---GPIPSLVGSLEFFSAYEANISGTIPD 160
+ Q K ++ + + + P + +L+ + G+ +
Sbjct: 267 VAKQTVKKLTGQNEEECTVPTLGHYGAYCCEDLPAPFADRLIALKRKEHALLSGQGSETE 326
Query: 161 FIGTDTF--PQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVS 218
+ + + +D + I L L +
Sbjct: 327 RLECERENQARQREIDALKEQYRTVIDQVT-------LRKQAKITLEQKKKALDEQVS-N 378
Query: 219 SFNNHPKLTTLN---LTNNLLQGPTPRFNNSKL 248
H +L + LQ T + +L
Sbjct: 379 GRRAHAELDGTLQQAVGQIELQHATEEQSPLQL 411
|
| >1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342 | Back alignment and structure |
|---|
Score = 72.5 bits (178), Expect = 6e-14
Identities = 38/249 (15%), Positives = 67/249 (26%), Gaps = 87/249 (34%)
Query: 405 DMAIPIQVLRNATNNFSEENRLGRGGVGTVYKGELKDGTEVGVKRMELGSVTEQGIAQFE 464
+P+ V R + +G+G G V++G+ + G EV VK E
Sbjct: 29 GSGLPLLVQRTIARTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSREERS---WFRE 84
Query: 465 SEITVLTK--------------------------------GTLGRHLFNWEEEGLEPLEW 492
+EI G+L +L +
Sbjct: 85 AEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNR------YTVTV 138
Query: 493 NTRLNIALDVARG------------------------------DDMR--VADFGLVRLVP 520
+ +AL A G + +AD GL
Sbjct: 139 EGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHD 198
Query: 521 ENGKHSIL--TKVAGTFGYLAPEYIVTGRI-------TAKVDVYSFGMILMDLITGRKVV 571
+ GT Y+APE ++ I + D+Y+ G++ ++
Sbjct: 199 SATDTIDIAPNHRVGTKRYMAPE-VLDDSINMKHFESFKRADIYAMGLVFWEIARR---C 254
Query: 572 DATHSDPEY 580
+Y
Sbjct: 255 SIGGIHEDY 263
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 | Back alignment and structure |
|---|
Score = 73.6 bits (181), Expect = 8e-14
Identities = 27/139 (19%), Positives = 48/139 (34%), Gaps = 19/139 (13%)
Query: 106 DQNRKGTVPPILKKLSSMAVMYLENNQLRGPIPSLV----GSLEFFSAYEANISGTIPDF 161
N T+ L + + +++ L+ V +L + +IS T
Sbjct: 381 SFNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYL-----DISHTHTRV 435
Query: 162 IGTDTF---PQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVS 218
F L L + N+ Q + L L L L +L + P +
Sbjct: 436 AFNGIFNGLSSLEVLKMAGNSFQENFLPDI------FTELRNLTFLDLSQCQLEQLSP-T 488
Query: 219 SFNNHPKLTTLNLTNNLLQ 237
+FN+ L LN+ +N L+
Sbjct: 489 AFNSLSSLQVLNMASNQLK 507
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 | Back alignment and structure |
|---|
Score = 68.2 bits (167), Expect = 4e-12
Identities = 31/146 (21%), Positives = 45/146 (30%), Gaps = 32/146 (21%)
Query: 107 QNRKGTVPPILKKLSSMAVMYLENNQLRGPIPSLVGSLEFFSAYEANISGTIPDFIGTDT 166
N+ G L S+ + L N L GT
Sbjct: 334 SNKGGNAFS-EVDLPSLEFLDLSRNGLS------------------FKGCCSQSDFGT-- 372
Query: 167 FPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKL 226
L YLDL N + T+ S+F L LE L H+ L + S F + L
Sbjct: 373 -TSLKYLDLSFNGVI-TMSSNF-------LGLEQLEHLDFQHSNLKQMSEFSVFLSLRNL 423
Query: 227 TTLNLTNNLLQGPTPRF--NNSKLTV 250
L++++ + S L V
Sbjct: 424 IYLDISHTHTRVAFNGIFNGLSSLEV 449
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 | Back alignment and structure |
|---|
Score = 64.7 bits (158), Expect = 5e-11
Identities = 25/95 (26%), Positives = 37/95 (38%), Gaps = 14/95 (14%)
Query: 158 IPDFIGTDTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPV 217
IPD + T LDL N L+ SF + L+ L L ++ I
Sbjct: 22 IPDNLPFST----KNLDLSFNPLRHLGSYSF-------FSFPELQVLDLSRCEIQTI-ED 69
Query: 218 SSFNNHPKLTTLNLTNNLLQG-PTPRFNN-SKLTV 250
++ + L+TL LT N +Q F+ S L
Sbjct: 70 GAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQK 104
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 | Back alignment and structure |
|---|
Score = 63.2 bits (154), Expect = 1e-10
Identities = 24/135 (17%), Positives = 43/135 (31%), Gaps = 20/135 (14%)
Query: 114 PPILKKLSSMAVMYLENNQLRGPIPSLV----GSLEFFSAYEANISGTIPDFIGTDTF-- 167
+ V+ L +++ I L ++G + F
Sbjct: 45 SYSFFSFPELQVLDLSRCEIQT-IEDGAYQSLSHLSTL-----ILTGNPIQSLALGAFSG 98
Query: 168 -PQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKL 226
L L NL G +L TL++L++ HN + F+N L
Sbjct: 99 LSSLQKLVAVETNLASLENFPIG-------HLKTLKELNVAHNLIQSFKLPEYFSNLTNL 151
Query: 227 TTLNLTNNLLQGPTP 241
L+L++N +Q
Sbjct: 152 EHLDLSSNKIQSIYC 166
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 | Back alignment and structure |
|---|
Score = 55.5 bits (134), Expect = 3e-08
Identities = 26/148 (17%), Positives = 45/148 (30%), Gaps = 12/148 (8%)
Query: 107 QNRKGTVPP-ILKKLSSMAVMYLENNQLRGPIPSLVG---SLEFFSAYEANISGTIPDFI 162
N ++ LSS+ + L +G +L+ + I +
Sbjct: 85 GNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQ-SFKLPE 143
Query: 163 GTDTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLE-DLSLGHNKLTGIFPVSSFN 221
L +LDL +N +Q + + + L L L N + I +F
Sbjct: 144 YFSNLTNLEHLDLSSNKIQSIYCTDL----RVLHQMPLLNLSLDLSLNPMNFI-QPGAFK 198
Query: 222 NHPKLTTLNLTNNLLQGPTPRFNNSKLT 249
+L L L NN + L
Sbjct: 199 E-IRLHKLTLRNNFDSLNVMKTCIQGLA 225
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 | Back alignment and structure |
|---|
Score = 51.6 bits (124), Expect = 5e-07
Identities = 23/133 (17%), Positives = 43/133 (32%), Gaps = 13/133 (9%)
Query: 113 VPPILKKLSSMAVMYLENNQLRGPIPSLVGSLEF--FSAYEANISGTIPDFIGTDTF--P 168
+P L+++ + L +N+++ + + L ++S +FI F
Sbjct: 141 LPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEI 200
Query: 169 QLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLG----HNKLTGIFPVSSFNNHP 224
+L L L NN + + ++ L L LG L S+
Sbjct: 201 RLHKLTLRNNFDSLNVMKTC---IQGLAGLEVH-RLVLGEFRNEGNLEKF-DKSALEGLC 255
Query: 225 KLTTLNLTNNLLQ 237
LT L
Sbjct: 256 NLTIEEFRLAYLD 268
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 | Back alignment and structure |
|---|
Score = 43.2 bits (102), Expect = 2e-04
Identities = 18/110 (16%), Positives = 38/110 (34%), Gaps = 14/110 (12%)
Query: 107 QNRKGTVPP-ILKKLSSMAVMYLENNQLRGPIPSLV----GSLEFFSAYEANISGTIPDF 161
I LSS+ V+ + N + + +L F + + P
Sbjct: 430 HTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTA 489
Query: 162 IGTDTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKL 211
++ L L++ +N L+ ++P L++L+ + L N
Sbjct: 490 F--NSLSSLQVLNMASNQLK-SVPDGI------FDRLTSLQKIWLHTNPW 530
|
| >2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri} Length = 306 | Back alignment and structure |
|---|
Score = 71.2 bits (175), Expect = 1e-13
Identities = 34/163 (20%), Positives = 59/163 (36%), Gaps = 41/163 (25%)
Query: 86 CQWSHVICSDDG----------QVTNIELQDQNRKGTVPP-ILKKLSSMAVMYLENNQLR 134
C + + C+ G T +EL+ N+ ++P + KL+ + + L +N L
Sbjct: 7 CSGTEIRCNSKGLTSVPTGIPSSATRLELES-NKLQSLPHGVFDKLTQLTKLSLSSNGL- 64
Query: 135 GPIPSLVGSLEFFSAYEANISGTIPDFIGTDTFPQLSYLDLGNNNLQGTIPSSFGMPFAD 194
+ GT L YLDL N + T+ S+F
Sbjct: 65 -----------------SFKGCCSQSDFGT---TSLKYLDLSFNGVI-TMSSNF------ 97
Query: 195 ISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNNLLQ 237
L LE L H+ L + S F + L L++++ +
Sbjct: 98 -LGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTR 139
|
| >2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri} Length = 306 | Back alignment and structure |
|---|
Score = 65.8 bits (161), Expect = 6e-12
Identities = 23/141 (16%), Positives = 50/141 (35%), Gaps = 22/141 (15%)
Query: 106 DQNRKGTVPP--ILKKLSSMAVMYLENNQLRGPIPSLV----GSLEFFSAYEANISGTIP 159
+ + + L ++ + + + R + + SLE +
Sbjct: 109 QHSNLKQMSEFSVFLSLRNLIYLDISHTHTRV-AFNGIFNGLSSLEVLKMAGNSFQENFL 167
Query: 160 DFIGTDTF---PQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFP 216
D F L++LDL L+ P++F ++LS+L+ L++ HN +
Sbjct: 168 P----DIFTELRNLTFLDLSQCQLEQLSPTAF-------NSLSSLQVLNMSHNNFFSL-D 215
Query: 217 VSSFNNHPKLTTLNLTNNLLQ 237
+ L L+ + N +
Sbjct: 216 TFPYKCLNSLQVLDYSLNHIM 236
|
| >2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri} Length = 306 | Back alignment and structure |
|---|
Score = 65.8 bits (161), Expect = 8e-12
Identities = 25/147 (17%), Positives = 50/147 (34%), Gaps = 20/147 (13%)
Query: 98 QVTNIELQDQNRKGTVPPILKKLSSMAVMYLENNQLR-----GPIPSLVGSLEFFSAYEA 152
+ ++L N T+ L + + +++ L+ SL +L +
Sbjct: 79 SLKYLDLSF-NGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSL-RNLIYLDISHT 136
Query: 153 NISGTIPD--FIGTDTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNK 210
+ + F G L L + N+ Q + L L L L +
Sbjct: 137 HTR-VAFNGIFNGL---SSLEVLKMAGNSFQENFLPDI------FTELRNLTFLDLSQCQ 186
Query: 211 LTGIFPVSSFNNHPKLTTLNLTNNLLQ 237
L + ++FN+ L LN+++N
Sbjct: 187 LEQL-SPTAFNSLSSLQVLNMSHNNFF 212
|
| >2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri} Length = 306 | Back alignment and structure |
|---|
Score = 62.3 bits (152), Expect = 9e-11
Identities = 27/130 (20%), Positives = 47/130 (36%), Gaps = 18/130 (13%)
Query: 114 PPILKKLSSMAVMYLENNQLRGPIPSL---VGSLEFFSAYEANISGTIPDFIGTDTF--- 167
+S+ + L N + + S + LE +N+ + +F F
Sbjct: 71 SQSDFGTTSLKYLDLSFNGVIT-MSSNFLGLEQLEHLDFQHSNLK-QMSEF---SVFLSL 125
Query: 168 PQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLT 227
L YLD+ + + + F + LS+LE L + N F F LT
Sbjct: 126 RNLIYLDISHTHTRVAFNGIF-------NGLSSLEVLKMAGNSFQENFLPDIFTELRNLT 178
Query: 228 TLNLTNNLLQ 237
L+L+ L+
Sbjct: 179 FLDLSQCQLE 188
|
| >2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri} Length = 306 | Back alignment and structure |
|---|
Score = 55.8 bits (135), Expect = 1e-08
Identities = 21/91 (23%), Positives = 32/91 (35%), Gaps = 12/91 (13%)
Query: 157 TIPDFIGTDTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIF- 215
++P I + L+L +N LQ F L+ L LSL N L+
Sbjct: 21 SVPTGI----PSSATRLELESNKLQSLPHGVF-------DKLTQLTKLSLSSNGLSFKGC 69
Query: 216 PVSSFNNHPKLTTLNLTNNLLQGPTPRFNNS 246
S L L+L+ N + + F
Sbjct: 70 CSQSDFGTTSLKYLDLSFNGVITMSSNFLGL 100
|
| >2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri} Length = 306 | Back alignment and structure |
|---|
Score = 55.0 bits (133), Expect = 2e-08
Identities = 24/138 (17%), Positives = 44/138 (31%), Gaps = 22/138 (15%)
Query: 106 DQNRKGTVPP-ILKKLSSMAVMYLENNQLRGPIPSLV----GSLEFFSAYEANISGTIPD 160
I LSS+ V+ + N + + +L F + + +
Sbjct: 134 SHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLE-QLSP 192
Query: 161 FIGTDTF---PQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPV 217
F L L++ +NN ++ + L++L+ L N +
Sbjct: 193 ----TAFNSLSSLQVLNMSHNNFF-SLDTFP------YKCLNSLQVLDYSLNHIMTS-KK 240
Query: 218 SSFNNHPK-LTTLNLTNN 234
+ P L LNLT N
Sbjct: 241 QELQHFPSSLAFLNLTQN 258
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} Length = 328 | Back alignment and structure |
|---|
Score = 68.0 bits (167), Expect = 1e-12
Identities = 24/133 (18%), Positives = 53/133 (39%), Gaps = 21/133 (15%)
Query: 112 TVPPILKKLSSMAVMYLENNQLRGPIPSLVG---SLEFFSAYEANISGTIPDFIGTDTFP 168
+P +++ + + + L N LR +P+ + L S +P+ + +
Sbjct: 118 ELPDTMQQFAGLETLTLARNPLRA-LPASIASLNRLRELSIRACPELTELPEPLASTDAS 176
Query: 169 -------QLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFN 221
L L L ++ ++P+S NL L+ L + ++ L+ + + +
Sbjct: 177 GEHQGLVNLQSLRLEWTGIR-SLPASIA-------NLQNLKSLKIRNSPLSAL-G-PAIH 226
Query: 222 NHPKLTTLNLTNN 234
+ PKL L+L
Sbjct: 227 HLPKLEELDLRGC 239
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} Length = 328 | Back alignment and structure |
|---|
Score = 67.7 bits (166), Expect = 2e-12
Identities = 22/128 (17%), Positives = 39/128 (30%), Gaps = 14/128 (10%)
Query: 112 TVPPILKKLSSMAVMYLENNQLRGPIPSLVG---SLEFFSAYEANISGTIPDFIGTDTFP 168
++P + L ++ + + N+ L + + LE P G
Sbjct: 197 SLPASIANLQNLKSLKIRNSPLSA-LGPAIHHLPKLEELDLRGCTALRNYPPIFGG--RA 253
Query: 169 QLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTT 228
L L L + + T+P L+ LE L L P S P
Sbjct: 254 PLKRLILKDCSNLLTLPLDIH-------RLTQLEKLDLRGCVNLSRLP-SLIAQLPANCI 305
Query: 229 LNLTNNLL 236
+ + +L
Sbjct: 306 ILVPPHLQ 313
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} Length = 328 | Back alignment and structure |
|---|
Score = 66.1 bits (162), Expect = 7e-12
Identities = 21/138 (15%), Positives = 39/138 (28%), Gaps = 12/138 (8%)
Query: 100 TNIELQDQNRKGTVPPILKKLSSMAVMYLENNQLRGPIPSLVGSLEFFSAYEANISGTIP 159
N+ Q +L + + + + + +
Sbjct: 15 ENLYFQGSTALRPYHDVLSQWQRHYNADRNRWHSAWRQANS-NNPQIETRTGRALK-ATA 72
Query: 160 DFIGTDTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSS 219
D + T P L+L + L P LS L+ +++ L + P +
Sbjct: 73 DLLEDATQPGRVALELRSVPLP-QFPDQAF-------RLSHLQHMTIDAAGLMEL-P-DT 122
Query: 220 FNNHPKLTTLNLTNNLLQ 237
L TL L N L+
Sbjct: 123 MQQFAGLETLTLARNPLR 140
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} Length = 328 | Back alignment and structure |
|---|
Score = 42.6 bits (101), Expect = 2e-04
Identities = 18/120 (15%), Positives = 32/120 (26%), Gaps = 35/120 (29%)
Query: 97 GQVTNIE---LQDQNRKGTVPPILKKLSSMAVMYLEN-NQLRGPIPSLVGSLEFFSAYEA 152
+ +E L+ PPI + + + L++ + L
Sbjct: 226 HHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLL------------------ 267
Query: 153 NISGTIPDFIGTDTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLT 212
T+P I QL LDL +PS L + + +
Sbjct: 268 ----TLPLDIH--RLTQLEKLDLRGCVNLSRLPSLIA-------QLPANCIILVPPHLQA 314
|
| >3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} Length = 440 | Back alignment and structure |
|---|
Score = 69.0 bits (169), Expect = 1e-12
Identities = 29/139 (20%), Positives = 50/139 (35%), Gaps = 34/139 (24%)
Query: 100 TNIELQDQNRKGTVPP-ILKKLSSMAVMYLENNQLRGPIPSLVGSLEFFSAYEANISGTI 158
++L + R + + LS++ + L LR I
Sbjct: 163 RRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLR----------------------EI 200
Query: 159 PDFIGTDTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVS 218
P+ +L LDL N+L P SF L L+ L + +++ I +
Sbjct: 201 PNLTPL---IKLDELDLSGNHLSAIRPGSF-------QGLMHLQKLWMIQSQIQVI-ERN 249
Query: 219 SFNNHPKLTTLNLTNNLLQ 237
+F+N L +NL +N L
Sbjct: 250 AFDNLQSLVEINLAHNNLT 268
|
| >3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} Length = 440 | Back alignment and structure |
|---|
Score = 62.8 bits (153), Expect = 1e-10
Identities = 41/179 (22%), Positives = 68/179 (37%), Gaps = 40/179 (22%)
Query: 83 PDPC----QWSHVICSDDG----------QVTNIELQDQNRKGTVPP-ILKKLSSMAVMY 127
P C Q+S VIC + L + N+ + K L + ++
Sbjct: 36 PSVCSCSNQFSKVICVRKNLREVPDGISTNTRLLNLHE-NQIQIIKVNSFKHLRHLEILQ 94
Query: 128 LENNQLRGPIPSLV----GSLEFFSAYEANISGTIPDFIGTDTF---PQLSYLDLGNNNL 180
L N +R I +L ++ ++ TIP+ F +L L L NN +
Sbjct: 95 LSRNHIRT-IEIGAFNGLANLNTLELFDNRLT-TIPN----GAFVYLSKLKELWLRNNPI 148
Query: 181 QGTIPS-SFGMPFADISNLSTLEDLSLGH-NKLTGIFPVSSFNNHPKLTTLNLTNNLLQ 237
+ +IPS +F + + +L L LG +L+ I +F L LNL L+
Sbjct: 149 E-SIPSYAF-------NRIPSLRRLDLGELKRLSYI-SEGAFEGLSNLRYLNLAMCNLR 198
|
| >1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A* Length = 285 | Back alignment and structure |
|---|
Score = 67.3 bits (165), Expect = 2e-12
Identities = 37/179 (20%), Positives = 56/179 (31%), Gaps = 39/179 (21%)
Query: 83 PDPC-----QWSHVICSDDG----------QVTNIELQDQNRKGTVPP-ILKKLSSMAVM 126
P C C G I L NR VP + ++ ++
Sbjct: 3 PGACVCYNEPKVTTSCPQQGLQAVPVGIPAASQRIFLHG-NRISHVPAASFRACRNLTIL 61
Query: 127 YLENNQLRGPIPSLV----GSLEFFSAYEANISGTIPDFIGTDTF---PQLSYLDLGNNN 179
+L +N L I + LE + ++ TF +L L L
Sbjct: 62 WLHSNVLAR-IDAAAFTGLALLEQLDLSDNAQLRSVDP----ATFHGLGRLHTLHLDRCG 116
Query: 180 LQGTIPS-SFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNNLLQ 237
LQ + F L+ L+ L L N L + P +F + LT L L N +
Sbjct: 117 LQ-ELGPGLF-------RGLAALQYLYLQDNALQAL-PDDTFRDLGNLTHLFLHGNRIS 166
|
| >1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A* Length = 285 | Back alignment and structure |
|---|
Score = 66.9 bits (164), Expect = 2e-12
Identities = 30/142 (21%), Positives = 57/142 (40%), Gaps = 22/142 (15%)
Query: 104 LQDQNRKGTVPP-ILKKLSSMAVMYLENNQLRGPIPSLV----GSLEFFSAYEANISGTI 158
L D + +V P L + ++L+ L+ + + +L++ + + +
Sbjct: 87 LSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQE-LGPGLFRGLAALQYLYLQDNALQ-AL 144
Query: 159 PDFIGTDTF---PQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIF 215
PD DTF L++L L N + +F L +L+ L L N++ +
Sbjct: 145 PD----DTFRDLGNLTHLFLHGNRISSVPERAF-------RGLHSLDRLLLHQNRVAHV- 192
Query: 216 PVSSFNNHPKLTTLNLTNNLLQ 237
+F + +L TL L N L
Sbjct: 193 HPHAFRDLGRLMTLYLFANNLS 214
|
| >1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A* Length = 285 | Back alignment and structure |
|---|
Score = 62.3 bits (152), Expect = 7e-11
Identities = 27/141 (19%), Positives = 45/141 (31%), Gaps = 23/141 (16%)
Query: 106 DQNRKGTVPP-ILKKLSSMAVMYLENNQLRGPIPSLV----GSLEFFSAYEANISGTIPD 160
N + L+ + + L +N + G L + +
Sbjct: 64 HSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQ-ELGP 122
Query: 161 FIGTDTF---PQLSYLDLGNNNLQGTIPS-SFGMPFADISNLSTLEDLSLGHNKLTGIFP 216
F L YL L +N LQ +P +F +L L L L N+++ + P
Sbjct: 123 ----GLFRGLAALQYLYLQDNALQ-ALPDDTF-------RDLGNLTHLFLHGNRISSV-P 169
Query: 217 VSSFNNHPKLTTLNLTNNLLQ 237
+F L L L N +
Sbjct: 170 ERAFRGLHSLDRLLLHQNRVA 190
|
| >1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A* Length = 285 | Back alignment and structure |
|---|
Score = 60.4 bits (147), Expect = 4e-10
Identities = 31/140 (22%), Positives = 55/140 (39%), Gaps = 22/140 (15%)
Query: 106 DQNRKGTVPP-ILKKLSSMAVMYLENNQLRGPIPSLV----GSLEFFSAYEANISGTIPD 160
D+ + P + + L+++ +YL++N L+ +P G+L + IS ++P+
Sbjct: 113 DRCGLQELGPGLFRGLAALQYLYLQDNALQA-LPDDTFRDLGNLTHLFLHGNRIS-SVPE 170
Query: 161 FIGTDTF---PQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPV 217
F L L L N + P +F +L L L L N L+ + P
Sbjct: 171 ----RAFRGLHSLDRLLLHQNRVAHVHPHAF-------RDLGRLMTLYLFANNLSAL-PT 218
Query: 218 SSFNNHPKLTTLNLTNNLLQ 237
+ L L L +N
Sbjct: 219 EALAPLRALQYLRLNDNPWV 238
|
| >3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A Length = 452 | Back alignment and structure |
|---|
Score = 68.6 bits (168), Expect = 2e-12
Identities = 22/139 (15%), Positives = 50/139 (35%), Gaps = 34/139 (24%)
Query: 100 TNIELQDQNRKGTVPP-ILKKLSSMAVMYLENNQLRGPIPSLVGSLEFFSAYEANISGTI 158
++L + + + + L ++ + L ++ +
Sbjct: 174 MRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIK----------------------DM 211
Query: 159 PDFIGTDTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVS 218
P+ L L++ N+ P SF LS+L+ L + +++++ I +
Sbjct: 212 PNLTPL---VGLEELEMSGNHFPEIRPGSF-------HGLSSLKKLWVMNSQVSLI-ERN 260
Query: 219 SFNNHPKLTTLNLTNNLLQ 237
+F+ L LNL +N L
Sbjct: 261 AFDGLASLVELNLAHNNLS 279
|
| >3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A Length = 452 | Back alignment and structure |
|---|
Score = 62.1 bits (151), Expect = 3e-10
Identities = 40/179 (22%), Positives = 66/179 (36%), Gaps = 40/179 (22%)
Query: 83 PDPC----QWSHVICSDDG----------QVTNIELQDQNRKGTVPP-ILKKLSSMAVMY 127
P C Q+S V+C+ G + L + N + + L + V+
Sbjct: 47 PSVCSCSNQFSKVVCTRRGLSEVPQGIPSNTRYLNLME-NNIQMIQADTFRHLHHLEVLQ 105
Query: 128 LENNQLRGPIPSLV----GSLEFFSAYEANISGTIPDFIGTDTF---PQLSYLDLGNNNL 180
L N +R I SL ++ ++ I + F +L L L NN +
Sbjct: 106 LGRNSIRQ-IEVGAFNGLASLNTLELFDNWLT-----VIPSGAFEYLSKLRELWLRNNPI 159
Query: 181 QGTIPS-SFGMPFADISNLSTLEDLSLGH-NKLTGIFPVSSFNNHPKLTTLNLTNNLLQ 237
+ +IPS +F + + +L L LG KL I +F L LNL ++
Sbjct: 160 E-SIPSYAF-------NRVPSLMRLDLGELKKLEYI-SEGAFEGLFNLKYLNLGMCNIK 209
|
| >1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus} Length = 312 | Back alignment and structure |
|---|
Score = 67.2 bits (164), Expect = 3e-12
Identities = 24/136 (17%), Positives = 44/136 (32%), Gaps = 24/136 (17%)
Query: 107 QNRKGTVP-PILKKLSSMAVMYLENNQLRGPIPSLVGSLEFFSAYEANISGTIPDFIGTD 165
Q ++ +++ + L +N G + +
Sbjct: 158 QAHSLNFSCEQVRVFPALSTLDLSDNPELGERG-------------------LISALCPL 198
Query: 166 TFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPK 225
FP L L L N ++ + G+ A + L+ L L HN L S + +
Sbjct: 199 KFPTLQVLALRNAGME----TPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQ 254
Query: 226 LTTLNLTNNLLQGPTP 241
L +LNL+ L+
Sbjct: 255 LNSLNLSFTGLKQVPK 270
|
| >1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus} Length = 312 | Back alignment and structure |
|---|
Score = 59.9 bits (145), Expect = 6e-10
Identities = 29/163 (17%), Positives = 54/163 (33%), Gaps = 16/163 (9%)
Query: 98 QVTNIELQDQNRKGTVPPILKKLSSMAVMYL--ENNQLRGPIPSLVGSLEFFSAY----- 150
+ + L++ GT PP L + + + L N + + L+ +
Sbjct: 96 GLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWAT-RDAWLAELQQWLKPGLKVL 154
Query: 151 --EANISGTIPDFIGTDTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGH 208
S FP LS LDL +N G + TL+ L+L +
Sbjct: 155 SIAQAHSLNFS-CEQVRVFPALSTLDLSDNPELGERGLISALCP---LKFPTLQVLALRN 210
Query: 209 NKLTGIFPV--SSFNNHPKLTTLNLTNNLLQGPTPRFNNSKLT 249
+ V + +L L+L++N L+ + +
Sbjct: 211 AGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPS 253
|
| >1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus} Length = 312 | Back alignment and structure |
|---|
Score = 59.1 bits (143), Expect = 1e-09
Identities = 29/148 (19%), Positives = 52/148 (35%), Gaps = 16/148 (10%)
Query: 104 LQDQNRKGTVPPILKKLSSMAVMYLENNQLRGPIPSLVGSLEFFSA--------YEANIS 155
L+ + + + + S+++ L R P L G+L ++
Sbjct: 49 LKRVDTEADLGQFTDIIKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVT 108
Query: 156 GTIPDFIGTDTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLST--LEDLSLGHNKLTG 213
GT P + T P L+ L+L N + A++ L+ LS+
Sbjct: 109 GTAPPPLLEATGPDLNILNLRNVSWAT-----RDAWLAELQQWLKPGLKVLSIAQAHSLN 163
Query: 214 IFPVSSFNNHPKLTTLNLTNNLLQGPTP 241
F P L+TL+L++N G
Sbjct: 164 -FSCEQVRVFPALSTLDLSDNPELGERG 190
|
| >1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus} Length = 312 | Back alignment and structure |
|---|
Score = 50.3 bits (120), Expect = 8e-07
Identities = 23/107 (21%), Positives = 33/107 (30%), Gaps = 18/107 (16%)
Query: 111 GTVPPILKKLSSMAVMYLENNQLRGPIP----SLVGSLEFFSAYEANISGTIPDFIGTDT 166
G + + + L +N LR L N+S T +
Sbjct: 218 GVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSL-----NLSFTGLKQVPKGL 272
Query: 167 FPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTG 213
+LS LDL N L PS +P + +LSL N
Sbjct: 273 PAKLSVLDLSYNRLD-RNPSPDELP--------QVGNLSLKGNPFLD 310
|
| >3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium} Length = 622 | Back alignment and structure |
|---|
Score = 67.6 bits (165), Expect = 6e-12
Identities = 35/175 (20%), Positives = 65/175 (37%), Gaps = 23/175 (13%)
Query: 106 DQNRKGTVPPILKKLSSMAVMYLENNQLRGPIPSLVGSLEFFSAYEANISGTIPDFIGTD 165
N+ ++P + +L + + NN+L +P+L L+ ++ ++P
Sbjct: 189 SDNQLASLPTLPSELYKL---WAYNNRLT-SLPALPSGLKELIVSGNRLT-SLPVLPS-- 241
Query: 166 TFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPK 225
+L L + N L ++P S L LS+ N+LT + P S +
Sbjct: 242 ---ELKELMVSGNRLT-SLPML----------PSGLLSLSVYRNQLTRL-P-ESLIHLSS 285
Query: 226 LTTLNLTNNLLQGPTPRFNNSKLTVDMRTGSNCFCLDDPGLACDSRVNILLSIAE 280
TT+NL N L T + + +G A + L+ A+
Sbjct: 286 ETTVNLEGNPLSERTLQALREITSAPGYSGPIIRFDMAGASAPRETRALHLAAAD 340
|
| >3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium} Length = 622 | Back alignment and structure |
|---|
Score = 59.9 bits (145), Expect = 2e-09
Identities = 24/141 (17%), Positives = 54/141 (38%), Gaps = 27/141 (19%)
Query: 97 GQVTNIELQDQNRKGTVPPILKKLSSMAVMYLENNQLRGPIPSLVGSLEFFSAYEANISG 156
++ +E+ N+ ++P + L +++ L P+L L + ++
Sbjct: 81 PELRTLEVSG-NQLTSLPVLPPGLLELSIFSNPLTHL----PALPSGLCKLWIFGNQLT- 134
Query: 157 TIPDFIGTDTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFP 216
++P L L + +N L ++P+ L L +N+LT + P
Sbjct: 135 SLPVLPP-----GLQELSVSDNQLA-SLPALPS----------ELCKLWAYNNQLTSL-P 177
Query: 217 VSSFNNHPKLTTLNLTNNLLQ 237
+ L L++++N L
Sbjct: 178 MLPSG----LQELSVSDNQLA 194
|
| >3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium} Length = 622 | Back alignment and structure |
|---|
Score = 58.0 bits (140), Expect = 6e-09
Identities = 29/140 (20%), Positives = 53/140 (37%), Gaps = 27/140 (19%)
Query: 97 GQVTNIELQDQNRKGTVPPILKKLSSMAVMYLENNQLRGPIPSLVGSLEFFSAYEANISG 156
+ + + N +P + L + ++ NQL +P L L+ S + ++
Sbjct: 101 PGLLELSIFS-NPLTHLPALPSGLCKL---WIFGNQLTS-LPVLPPGLQELSVSDNQLA- 154
Query: 157 TIPDFIGTDTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFP 216
++P +L L NN L ++P S L++LS+ N+L + P
Sbjct: 155 SLPALPS-----ELCKLWAYNNQLT-SLPML----------PSGLQELSVSDNQLASL-P 197
Query: 217 VSSFNNHPKLTTLNLTNNLL 236
+L L NN L
Sbjct: 198 TLP----SELYKLWAYNNRL 213
|
| >3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium} Length = 622 | Back alignment and structure |
|---|
Score = 53.4 bits (128), Expect = 2e-07
Identities = 20/139 (14%), Positives = 44/139 (31%), Gaps = 26/139 (18%)
Query: 101 NIELQDQNRKGTVPPILKK--LSSMAVMYLENNQLRGPIPSLVG-SLEFFSAYEANISGT 157
++ + V ++ + AV+ + + L +P + + + N++ +
Sbjct: 18 AAPAEESRGRAAVVQKMRACLNNGNAVLNVGESGLTT-LPDCLPAHITTLVIPDNNLT-S 75
Query: 158 IPDFIGTDTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPV 217
+P +L L++ N L ++P L L S L +
Sbjct: 76 LPALPP-----ELRTLEVSGNQLT-SLPVL-------PPGLLELSIFSNPLTHLPAL--- 119
Query: 218 SSFNNHPKLTTLNLTNNLL 236
L L + N L
Sbjct: 120 -----PSGLCKLWIFGNQL 133
|
| >1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A Length = 290 | Back alignment and structure |
|---|
Score = 65.5 bits (160), Expect = 6e-12
Identities = 33/148 (22%), Positives = 52/148 (35%), Gaps = 38/148 (25%)
Query: 106 DQNRKGTVPPILKKLSSMAVMYLENNQLRGPIPSLVGSLEFFSAYEANISGTIPD--FIG 163
N+ ++P + + L ++ V+ + N+L ++P
Sbjct: 85 SHNQLQSLPLLGQTLPALTVLDVSFNRLT----------------------SLPLGAL-- 120
Query: 164 TDTFPQLSYLDLGNNNLQGTIPSS-FGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNN 222
+L L L N L+ T+P + LE LSL +N LT + P N
Sbjct: 121 -RGLGELQELYLKGNELK-TLPPGLL-------TPTPKLEKLSLANNNLTEL-PAGLLNG 170
Query: 223 HPKLTTLNLTNNLLQG-PTPRFNNSKLT 249
L TL L N L P F + L
Sbjct: 171 LENLDTLLLQENSLYTIPKGFFGSHLLP 198
|
| >1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A Length = 290 | Back alignment and structure |
|---|
Score = 49.7 bits (119), Expect = 1e-06
Identities = 18/73 (24%), Positives = 28/73 (38%), Gaps = 11/73 (15%)
Query: 165 DTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHP 224
+ +L+ L+L L + L L L L HN+L + P P
Sbjct: 52 MPYTRLTQLNLDRAELT-KLQ-----VDG---TLPVLGTLDLSHNQLQSL-P-LLGQTLP 100
Query: 225 KLTTLNLTNNLLQ 237
LT L+++ N L
Sbjct: 101 ALTVLDVSFNRLT 113
|
| >1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A Length = 290 | Back alignment and structure |
|---|
Score = 46.6 bits (111), Expect = 1e-05
Identities = 20/81 (24%), Positives = 32/81 (39%), Gaps = 14/81 (17%)
Query: 157 TIPDFIGTDTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFP 216
+P + DT + L L N L ++ + L L+L +LT +
Sbjct: 24 ALPPDLPKDT----TILHLSENLLYTFSLATL-------MPYTRLTQLNLDRAELTKL-- 70
Query: 217 VSSFNNHPKLTTLNLTNNLLQ 237
P L TL+L++N LQ
Sbjct: 71 -QVDGTLPVLGTLDLSHNQLQ 90
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A Length = 454 | Back alignment and structure |
|---|
Score = 66.6 bits (163), Expect = 8e-12
Identities = 29/141 (20%), Positives = 57/141 (40%), Gaps = 33/141 (23%)
Query: 112 TVPPILKKLSSMAVMYLENNQLRGPIPSLVGSLEFFSAYEANISGTIPDFIG-------- 163
P L+ L + +Y +NN L+ +P L SLE + + ++ +P+
Sbjct: 228 EELPELQNLPFLTTIYADNNLLKT-LPDLPPSLEALNVRDNYLT-DLPELPQSLTFLDVS 285
Query: 164 -------TDTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFP 216
++ P L YL+ +N ++ ++ +LE+L++ +NKL +
Sbjct: 286 ENIFSGLSELPPNLYYLNASSNEIR-SLCDL----------PPSLEELNVSNNKLIELPA 334
Query: 217 VSSFNNHPKLTTLNLTNNLLQ 237
P+L L + N L
Sbjct: 335 -----LPPRLERLIASFNHLA 350
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A Length = 454 | Back alignment and structure |
|---|
Score = 63.9 bits (156), Expect = 6e-11
Identities = 31/142 (21%), Positives = 59/142 (41%), Gaps = 24/142 (16%)
Query: 108 NRKGTVPPILKKLSSMAVMYLENNQLRGPIPSLVGSLEFFSAYEANISGTIPDFIGTDTF 167
N+ +P + + S + ++ ++NN L+ +P L SLEF +A + +P+
Sbjct: 141 NQLEKLPEL-QNSSFLKIIDVDNNSLKK-LPDLPPSLEFIAAGNNQLE-ELPELQN---L 194
Query: 168 PQLSYLDLGNNNLQGTIPSSFG------------MPFADISNLSTLEDLSLGHNKLTGIF 215
P L+ + NN+L+ +P ++ NL L + +N L +
Sbjct: 195 PFLTAIYADNNSLK-KLPDLPLSLESIVAGNNILEELPELQNLPFLTTIYADNNLLKTL- 252
Query: 216 PVSSFNNHPKLTTLNLTNNLLQ 237
+ P L LN+ +N L
Sbjct: 253 ----PDLPPSLEALNVRDNYLT 270
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A Length = 454 | Back alignment and structure |
|---|
Score = 63.9 bits (156), Expect = 6e-11
Identities = 22/131 (16%), Positives = 43/131 (32%), Gaps = 23/131 (17%)
Query: 106 DQNRKGTVPPILKKLSSMAVMYLENNQLRGPIPSLVGSLEFFSAYEANISGTIPDFIGTD 165
N VP + + L + ++E N LR P + S+E + +P+
Sbjct: 345 SFNHLAEVPELPQNLKQL---HVEYNPLRE-FPDIPESVE--DLRMNSHLAEVPELPQ-- 396
Query: 166 TFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPK 225
L L + N L+ P ++EDL + ++ + + K
Sbjct: 397 ---NLKQLHVETNPLR-EFPDI----------PESVEDLRMNSERVVDPYEF-AHETTDK 441
Query: 226 LTTLNLTNNLL 236
L ++
Sbjct: 442 LEDDVFEHHHH 452
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A Length = 454 | Back alignment and structure |
|---|
Score = 62.3 bits (152), Expect = 2e-10
Identities = 32/141 (22%), Positives = 54/141 (38%), Gaps = 29/141 (20%)
Query: 112 TVPPILKKLSSMAVMYLENNQLRGPIPSLVG--SLEFFSAYEANISGTIPDFIGTDTFPQ 169
+PP+L+ L + NNQL +P L L+ ++ +PD P
Sbjct: 128 DLPPLLEYL------GVSNNQLEK-LPELQNSSFLKIIDVDNNSLK-KLPDLP-----PS 174
Query: 170 LSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTL 229
L ++ GNN L+ +P ++ NL L + +N L + L ++
Sbjct: 175 LEFIAAGNNQLE-ELP--------ELQNLPFLTAIYADNNSLKKLPD-----LPLSLESI 220
Query: 230 NLTNNLLQGPTPRFNNSKLTV 250
NN+L+ N LT
Sbjct: 221 VAGNNILEELPELQNLPFLTT 241
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A Length = 454 | Back alignment and structure |
|---|
Score = 61.2 bits (149), Expect = 4e-10
Identities = 29/141 (20%), Positives = 52/141 (36%), Gaps = 27/141 (19%)
Query: 97 GQVTNIELQDQNRKGTVPPILKKLSSMAVMYLENNQLRGPIPSLVGSLEFFSAYEANISG 156
+ + ++D N +P + + L+ + V + L L +L + +A I
Sbjct: 257 PSLEALNVRD-NYLTDLPELPQSLTFLDVSENIFSGL----SELPPNLYYLNASSNEIR- 310
Query: 157 TIPDFIGTDTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFP 216
++ D P L L++ NN L +P+ LE L N L + P
Sbjct: 311 SLCDLP-----PSLEELNVSNNKLI-ELPAL----------PPRLERLIASFNHLAEV-P 353
Query: 217 VSSFNNHPKLTTLNLTNNLLQ 237
N L L++ N L+
Sbjct: 354 ELPQN----LKQLHVEYNPLR 370
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A Length = 454 | Back alignment and structure |
|---|
Score = 57.7 bits (140), Expect = 6e-09
Identities = 23/135 (17%), Positives = 48/135 (35%), Gaps = 22/135 (16%)
Query: 116 ILKKLSSMAVMYLENNQLRGPIPSLVGSLEFFSAYEANISGTIPDFIGTDTFPQLSYLDL 175
+ S+ + + NN+L +P+L LE A +++ +P+ L L +
Sbjct: 312 LCDLPPSLEELNVSNNKLIE-LPALPPRLERLIASFNHLA-EVPELPQ-----NLKQLHV 364
Query: 176 GNNNLQGTIPSSFG-MPFADISN--------LSTLEDLSLGHNKLTGIFPVSSFNNHPKL 226
N L+ P + +++ L+ L + N L FP + +
Sbjct: 365 EYNPLR-EFPDIPESVEDLRMNSHLAEVPELPQNLKQLHVETNPLR-EFPDIPES----V 418
Query: 227 TTLNLTNNLLQGPTP 241
L + + + P
Sbjct: 419 EDLRMNSERVVDPYE 433
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A Length = 454 | Back alignment and structure |
|---|
Score = 56.9 bits (138), Expect = 9e-09
Identities = 21/163 (12%), Positives = 46/163 (28%), Gaps = 42/163 (25%)
Query: 104 LQDQNRKGTVPPILKKLSSMAVMYLENNQLRGPIPSLVGSLEFFSAYEA----------- 152
L+ + +P + + S Y ++ P G +
Sbjct: 17 LRHSSNLTEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHEL 76
Query: 153 NISG----TIPDFIGTDTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGH 208
++ ++P+ L L N+L +P +L +L +
Sbjct: 77 ELNNLGLSSLPELPP-----HLESLVASCNSLT-ELPELPQ-------SLKSLLVDNNNL 123
Query: 209 NKLTGIFP--------------VSSFNNHPKLTTLNLTNNLLQ 237
L+ + P + N L +++ NN L+
Sbjct: 124 KALSDLPPLLEYLGVSNNQLEKLPELQNSSFLKIIDVDNNSLK 166
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A Length = 454 | Back alignment and structure |
|---|
Score = 44.2 bits (105), Expect = 1e-04
Identities = 10/81 (12%), Positives = 20/81 (24%), Gaps = 20/81 (24%)
Query: 169 QLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNN------ 222
L ++NL +P N+ + + ++ P +
Sbjct: 12 FLQEPLRHSSNLT-EMPVEAE-------NVKSKTEYYNAWSEWERNAPPGNGEQREMAVS 63
Query: 223 ------HPKLTTLNLTNNLLQ 237
+ L L N L
Sbjct: 64 RLRDCLDRQAHELELNNLGLS 84
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} Length = 477 | Back alignment and structure |
|---|
Score = 66.3 bits (162), Expect = 1e-11
Identities = 28/140 (20%), Positives = 47/140 (33%), Gaps = 22/140 (15%)
Query: 106 DQNRKGTVPP-ILKKLSSMAVMYLENNQLRGPIPSLV----GSLEFFSAYEANISGTIPD 160
N + L+S+ + LE L IP+ L NI+
Sbjct: 136 GDNDLVYISHRAFSGLNSLEQLTLEKCNLTS-IPTEALSHLHGLIVLRLRHLNIN----- 189
Query: 161 FIGTDTF---PQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPV 217
I +F +L L++ + T+ + L LS+ H LT + P
Sbjct: 190 AIRDYSFKRLYRLKVLEISHWPYLDTMTPNC-------LYGLNLTSLSITHCNLTAV-PY 241
Query: 218 SSFNNHPKLTTLNLTNNLLQ 237
+ + L LNL+ N +
Sbjct: 242 LAVRHLVYLRFLNLSYNPIS 261
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} Length = 477 | Back alignment and structure |
|---|
Score = 62.8 bits (153), Expect = 1e-10
Identities = 30/142 (21%), Positives = 50/142 (35%), Gaps = 21/142 (14%)
Query: 103 ELQDQNRKGTVPPILKKLSSMAVMYLENNQLRGPIPSLV----GSLEFFSAYEANISGTI 158
E+ T+ P ++ + + + L +P L L F + IS
Sbjct: 206 EISHWPYLDTMTPNCLYGLNLTSLSITHCNLTA-VPYLAVRHLVYLRFLNLSYNPIS--- 261
Query: 159 PDFIGTDTF---PQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIF 215
I +L + L L P +F L+ L L++ N+LT +
Sbjct: 262 --TIEGSMLHELLRLQEIQLVGGQLAVVEPYAF-------RGLNYLRVLNVSGNQLTTL- 311
Query: 216 PVSSFNNHPKLTTLNLTNNLLQ 237
S F++ L TL L +N L
Sbjct: 312 EESVFHSVGNLETLILDSNPLA 333
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} Length = 477 | Back alignment and structure |
|---|
Score = 62.8 bits (153), Expect = 2e-10
Identities = 34/140 (24%), Positives = 57/140 (40%), Gaps = 22/140 (15%)
Query: 106 DQNRKGTVPP-ILKKLSSMAVMYLENNQLRGPIPSLV----GSLEFFSAYEANISGTIPD 160
++N V P L ++ + L +N+L+ IP V +L E I + D
Sbjct: 64 NENIVSAVEPGAFNNLFNLRTLGLRSNRLKL-IPLGVFTGLSNLTKLDISENKIV-ILLD 121
Query: 161 FIGTDTF---PQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPV 217
F L L++G+N+L +F S L++LE L+L LT I P
Sbjct: 122 ----YMFQDLYNLKSLEVGDNDLVYISHRAF-------SGLNSLEQLTLEKCNLTSI-PT 169
Query: 218 SSFNNHPKLTTLNLTNNLLQ 237
+ ++ L L L + +
Sbjct: 170 EALSHLHGLIVLRLRHLNIN 189
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} Length = 477 | Back alignment and structure |
|---|
Score = 57.0 bits (138), Expect = 1e-08
Identities = 22/81 (27%), Positives = 36/81 (44%), Gaps = 12/81 (14%)
Query: 157 TIPDFIGTDTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFP 216
+P+ I + LDLG N ++ F ++ LE+L L N ++ +
Sbjct: 25 AVPEGI----PTETRLLDLGKNRIKTLNQDEF-------ASFPHLEELELNENIVSAV-E 72
Query: 217 VSSFNNHPKLTTLNLTNNLLQ 237
+FNN L TL L +N L+
Sbjct: 73 PGAFNNLFNLRTLGLRSNRLK 93
|
| >3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A} Length = 571 | Back alignment and structure |
|---|
Score = 66.1 bits (161), Expect = 1e-11
Identities = 32/160 (20%), Positives = 58/160 (36%), Gaps = 16/160 (10%)
Query: 106 DQNRKGTVPPILKKLSSMAVMYLENNQLRGPIPSLVGSLEFFSAYEANISGTIPDFIGTD 165
D N+ +P + L + +NNQL +P L SLE S ++ +P+
Sbjct: 128 DNNQLTMLPELPALLEYI---NADNNQLTM-LPELPTSLEVLSVRNNQLT-FLPELPE-- 180
Query: 166 TFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPK 225
L LD+ N L+ ++P+ + + T N++T I P + +
Sbjct: 181 ---SLEALDVSTNLLE-SLPAVPV---RNHHSEETEIFFRCRENRITHI-P-ENILSLDP 231
Query: 226 LTTLNLTNNLLQGPTPRFNNSKLTVDMRTGSNCFCLDDPG 265
T+ L +N L + + G + G
Sbjct: 232 TCTIILEDNPLSSRIRESLSQQTAQPDYHGPRIYFSMSDG 271
|
| >3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A} Length = 571 | Back alignment and structure |
|---|
Score = 56.1 bits (135), Expect = 2e-08
Identities = 24/133 (18%), Positives = 48/133 (36%), Gaps = 25/133 (18%)
Query: 106 DQNRKGTVPPILKKLSSMAVMYLENNQLRGPIPSLVG-SLEFFSAYEANISGTIPDFIGT 164
++N ++ ++ + + L L +P + + + + ++P+
Sbjct: 45 NRNEAVSLLKECL-INQFSELQLNRLNLSS-LPDNLPPQITVLEITQNALI-SLPELPA- 100
Query: 165 DTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHP 224
L YLD +N L T+P L+ L + +N+LT + P
Sbjct: 101 ----SLEYLDACDNRLS-TLPELPAS----------LKHLDVDNNQLTML-PELP----A 140
Query: 225 KLTTLNLTNNLLQ 237
L +N NN L
Sbjct: 141 LLEYINADNNQLT 153
|
| >1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 Length = 308 | Back alignment and structure |
|---|
Score = 64.7 bits (158), Expect = 2e-11
Identities = 34/146 (23%), Positives = 63/146 (43%), Gaps = 20/146 (13%)
Query: 106 DQNRKGTVPPILKKLSSMAVMYLENNQLRGPIPSLVG--SLEFFSAYEANISGTIPDFIG 163
+ V P L LS++ V+YL+ NQ+ I L G +L++ S A +S D
Sbjct: 115 TSTQITDVTP-LAGLSNLQVLYLDLNQITN-ISPLAGLTNLQYLSIGNAQVS----DLTP 168
Query: 164 TDTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNH 223
+L+ L +N + I +++L L ++ L +N+++ + S N
Sbjct: 169 LANLSKLTTLKADDNKIS-DISP--------LASLPNLIEVHLKNNQISDV---SPLANT 216
Query: 224 PKLTTLNLTNNLLQGPTPRFNNSKLT 249
L + LTN + +NN+ +
Sbjct: 217 SNLFIVTLTNQTITNQPVFYNNNLVV 242
|
| >1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 Length = 308 | Back alignment and structure |
|---|
Score = 62.4 bits (152), Expect = 8e-11
Identities = 33/136 (24%), Positives = 54/136 (39%), Gaps = 19/136 (13%)
Query: 117 LKKLSSMAVMYLENNQLRG--PIPSLVGSLEFFSAYEANISGTIPDFIGTDTFPQLSYLD 174
+ L S+ + L + Q+ P+ L +L+ I+ I L YL
Sbjct: 103 IAGLQSIKTLDLTSTQITDVTPLAGLS-NLQVLYLDLNQIT-NISPL---AGLTNLQYLS 157
Query: 175 LGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNN 234
+GN + P ++NLS L L NK++ I S + P L ++L NN
Sbjct: 158 IGNAQVSDLTP---------LANLSKLTTLKADDNKISDI---SPLASLPNLIEVHLKNN 205
Query: 235 LLQGPTPRFNNSKLTV 250
+ +P N S L +
Sbjct: 206 QISDVSPLANTSNLFI 221
|
| >1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 Length = 308 | Back alignment and structure |
|---|
Score = 58.5 bits (142), Expect = 1e-09
Identities = 23/135 (17%), Positives = 48/135 (35%), Gaps = 17/135 (12%)
Query: 117 LKKLSSMAVMYLENNQLRGPIP-SLVGSLEFFSAYEANISGTIPDFIGTDTFPQLSYLDL 175
L++ + + + + + + + SA+ ++ G L L+L
Sbjct: 15 DPALANAIKIAAGKSNVTDTVTQADLDGITTLSAFGTGVT----TIEGVQYLNNLIGLEL 70
Query: 176 GNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNNL 235
+N + + + NL+ + +L L N L + + TL+LT+
Sbjct: 71 KDNQIT-DLAP--------LKNLTKITELELSGNPLKNVSA---IAGLQSIKTLDLTSTQ 118
Query: 236 LQGPTPRFNNSKLTV 250
+ TP S L V
Sbjct: 119 ITDVTPLAGLSNLQV 133
|
| >1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 Length = 308 | Back alignment and structure |
|---|
Score = 52.0 bits (125), Expect = 2e-07
Identities = 18/101 (17%), Positives = 32/101 (31%), Gaps = 14/101 (13%)
Query: 152 ANISG--TIPDFIGTDTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHN 209
+I+ I + G +N+ T+ ++L + LS
Sbjct: 1 GSITQPTAINVIFPDPALANAIKIAAGKSNVTDTVT---------QADLDGITTLSAFGT 51
Query: 210 KLTGIFPVSSFNNHPKLTTLNLTNNLLQGPTPRFNNSKLTV 250
+T I L L L +N + P N +K+T
Sbjct: 52 GVTTI---EGVQYLNNLIGLELKDNQITDLAPLKNLTKITE 89
|
| >1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 Length = 308 | Back alignment and structure |
|---|
Score = 50.5 bits (121), Expect = 7e-07
Identities = 25/132 (18%), Positives = 44/132 (33%), Gaps = 20/132 (15%)
Query: 117 LKKLSSMAVMYLENNQLRGPIPSLVG--SLEFFSAYEANISGTIPDFIGTDTFPQLSYLD 174
L L+++ + + N Q+ + L L A + IS D + P L +
Sbjct: 147 LAGLTNLQYLSIGNAQVSD-LTPLANLSKLTTLKADDNKIS----DISPLASLPNLIEVH 201
Query: 175 LGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNN 234
L NN + P ++N S L ++L + +T + L N+
Sbjct: 202 LKNNQISDVSP---------LANTSNLFIVTLTNQTITNQ----PVFYNNNLVVPNVVKG 248
Query: 235 LLQGPTPRFNNS 246
P S
Sbjct: 249 PSGAPIAPATIS 260
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} Length = 197 | Back alignment and structure |
|---|
Score = 62.7 bits (153), Expect = 2e-11
Identities = 23/121 (19%), Positives = 44/121 (36%), Gaps = 16/121 (13%)
Query: 117 LKKLSSMAVMYLENNQLRG-PIPSLVG--SLEFFSAYEANISGTIPDFIGTDTFPQLSYL 173
+ LS++ + + + IP+L G SL + +I I T P+++ +
Sbjct: 84 ISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSILTKINT--LPKVNSI 141
Query: 174 DLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTN 233
DL N I + L L+ L++ + + + PKL L +
Sbjct: 142 DLSYNGAITDIMP--------LKTLPELKSLNIQFDGVHDY---RGIEDFPKLNQLYAFS 190
Query: 234 N 234
Sbjct: 191 Q 191
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} Length = 197 | Back alignment and structure |
|---|
Score = 60.0 bits (146), Expect = 2e-10
Identities = 20/151 (13%), Positives = 55/151 (36%), Gaps = 17/151 (11%)
Query: 104 LQDQNRKGTVPPILK-KLSSMAVMYLENNQLRG--PIPSLVGSLEFFSAYEANISGTIPD 160
L + + I + +++S+ + L N + I +++ + + + +
Sbjct: 26 LNGLLGQSSTANITEAQMNSLTYITLANINVTDLTGIEYAH-NIKDLTINNIHAT----N 80
Query: 161 FIGTDTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSF 220
+ L L + ++ ++S L++L L + H+ ++
Sbjct: 81 YNPISGLSNLERLRIMGKDVTSDKIP-------NLSGLTSLTLLDISHSAHDDS-ILTKI 132
Query: 221 NNHPKLTTLNLT-NNLLQGPTPRFNNSKLTV 250
N PK+ +++L+ N + P +L
Sbjct: 133 NTLPKVNSIDLSYNGAITDIMPLKTLPELKS 163
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} Length = 197 | Back alignment and structure |
|---|
Score = 41.5 bits (98), Expect = 3e-04
Identities = 20/110 (18%), Positives = 39/110 (35%), Gaps = 21/110 (19%)
Query: 142 GSLEFFSAYEANISGTIPDFIGTDTFPQLSYLDLGNNNLQGTIPSSFGMPFADI--SNLS 199
G+ E + + IPD TF LG ++ A+I + ++
Sbjct: 1 GAAEQTGLKASQDNVNIPD----STFKAYLNGLLGQSST------------ANITEAQMN 44
Query: 200 TLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNNLLQGPTPRFNNSKLT 249
+L ++L + +T + + +N + L + N P S L
Sbjct: 45 SLTYITLANINVTDLTGIEYAHN---IKDLTINNIHATNYNPISGLSNLE 91
|
| >3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* Length = 455 | Back alignment and structure |
|---|
Score = 65.2 bits (159), Expect = 2e-11
Identities = 37/179 (20%), Positives = 60/179 (33%), Gaps = 34/179 (18%)
Query: 81 SDPDPCQWS----HVICSDDG---------QVTNIELQDQNRKGTVPP-ILKKLSSMAVM 126
+DP + S + IC + G V ++L N + +L + +
Sbjct: 1 ADPGTSECSVIGYNAICINRGLHQVPELPAHVNYVDLS-LNSIAELNETSFSRLQDLQFL 59
Query: 127 YLENNQLRGPIPSLV----GSLEFFSAYEANISGTIPD--FIGTDTFPQLSYLDLGNNNL 180
+E I + SL + F + L L L NL
Sbjct: 60 KVEQQTPGLVIRNNTFRGLSSLIILKLDYNQFL-QLETGAF---NGLANLEVLTLTQCNL 115
Query: 181 QGTI--PSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNNLLQ 237
G + + F L++LE L L N + I P S F N + L+LT N ++
Sbjct: 116 DGAVLSGNFF-------KPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVK 167
|
| >3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* Length = 455 | Back alignment and structure |
|---|
Score = 62.8 bits (153), Expect = 2e-10
Identities = 30/165 (18%), Positives = 59/165 (35%), Gaps = 28/165 (16%)
Query: 79 KWSDPDPCQWSHVICSDDGQVTNIELQDQNRKGTVPP-ILKKLSSMAVMYLENNQLRGPI 137
+ DPD + + S V +L ++ + + + + + L N++ I
Sbjct: 260 NFKDPDNFTFKGLEASG---VKTCDLSK-SKIFALLKSVFSHFTDLEQLTLAQNEIN-KI 314
Query: 138 PSLV----GSLEFFSAYEANISGTIPDFIGTDTF---PQLSYLDLGNNNLQGTIPS-SFG 189
L + + + +I F +L LDL N+++ + SF
Sbjct: 315 DDNAFWGLTHLLKLNLSQNFLG-SIDS----RMFENLDKLEVLDLSYNHIR-ALGDQSF- 367
Query: 190 MPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNN 234
L L++L+L N+L + P F+ L + L N
Sbjct: 368 ------LGLPNLKELALDTNQLKSV-PDGIFDRLTSLQKIWLHTN 405
|
| >3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* Length = 455 | Back alignment and structure |
|---|
Score = 57.4 bits (139), Expect = 7e-09
Identities = 24/135 (17%), Positives = 45/135 (33%), Gaps = 24/135 (17%)
Query: 119 KLSSMAVMYLENNQLR----GPIPSLVGSLEFFSAYEANISGTIPDFIGTD--------- 165
K +S+ + L N + + + S +N F T+
Sbjct: 210 KNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSSFGHTNFKDPDNFTF 269
Query: 166 ---TFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNN 222
+ DL + + + + S+ + LE L+L N++ I ++F
Sbjct: 270 KGLEASGVKTCDLSKSKIF-ALLK--SVF----SHFTDLEQLTLAQNEINKI-DDNAFWG 321
Query: 223 HPKLTTLNLTNNLLQ 237
L LNL+ N L
Sbjct: 322 LTHLLKLNLSQNFLG 336
|
| >3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* Length = 455 | Back alignment and structure |
|---|
Score = 41.3 bits (97), Expect = 7e-04
Identities = 21/147 (14%), Positives = 45/147 (30%), Gaps = 8/147 (5%)
Query: 107 QNRKGTVPP-ILKKLSSMAVMYLENNQLRGPIPSLV----GSLEFFSAYEANISGTIPDF 161
+ K L+S+ ++ L +N ++ P+ + +
Sbjct: 114 NLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKSICEED 173
Query: 162 IGTDTFPQLSYLDLGNNNLQGTIPSSFG-MPFADISNLSTLEDLSLGHNKLTGIFPVSSF 220
+ + L L + LQ G + +++ L L N F
Sbjct: 174 LLNFQGKHFTLLRLSSITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFF 233
Query: 221 N--NHPKLTTLNLTNNLLQGPTPRFNN 245
+ K+ +L L+N+ G + N
Sbjct: 234 DAIAGTKIQSLILSNSYNMGSSFGHTN 260
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} Length = 844 | Back alignment and structure |
|---|
Score = 65.6 bits (160), Expect = 3e-11
Identities = 33/144 (22%), Positives = 50/144 (34%), Gaps = 21/144 (14%)
Query: 113 VPPILKKLSSMAVMYLENNQLRG-PIPSLVG--SLEFFSAYEANISGTIPDFIGTDTF-- 167
VP +L + L N +R S L+ TI + F
Sbjct: 19 VPQVLNTTERL---LLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDK----EAFRN 71
Query: 168 -PQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLT-GIFPVSSFNNHPK 225
P L LDLG++ + P +F L L +L L L+ + F N
Sbjct: 72 LPNLRILDLGSSKIYFLHPDAF-------QGLFHLFELRLYFCGLSDAVLKDGYFRNLKA 124
Query: 226 LTTLNLTNNLLQGPTPRFNNSKLT 249
LT L+L+ N ++ + KL
Sbjct: 125 LTRLDLSKNQIRSLYLHPSFGKLN 148
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} Length = 844 | Back alignment and structure |
|---|
Score = 65.2 bits (159), Expect = 4e-11
Identities = 23/131 (17%), Positives = 41/131 (31%), Gaps = 17/131 (12%)
Query: 114 PPILKKLSSMAVMYLENNQLRGPIPSLV----GSLEFFSAYEANISGTIPDFIGTDTF-- 167
L + ++ L + I +L + I F+ D F
Sbjct: 41 ASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIY-----FLHPDAFQG 95
Query: 168 -PQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKL 226
L L L L S + NL L L L N++ ++ SF L
Sbjct: 96 LFHLFELRLYFCGL-----SDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSL 150
Query: 227 TTLNLTNNLLQ 237
+++ ++N +
Sbjct: 151 KSIDFSSNQIF 161
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} Length = 844 | Back alignment and structure |
|---|
Score = 63.7 bits (155), Expect = 1e-10
Identities = 24/83 (28%), Positives = 35/83 (42%), Gaps = 3/83 (3%)
Query: 168 PQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLT 227
P L L LG N LQ + + LS L+ L L HN L + P F++ L
Sbjct: 451 PSLEQLFLGENMLQLAWETEL--CWDVFEGLSHLQVLYLNHNYLNSL-PPGVFSHLTALR 507
Query: 228 TLNLTNNLLQGPTPRFNNSKLTV 250
L+L +N L + + L +
Sbjct: 508 GLSLNSNRLTVLSHNDLPANLEI 530
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} Length = 844 | Back alignment and structure |
|---|
Score = 62.9 bits (153), Expect = 2e-10
Identities = 37/153 (24%), Positives = 56/153 (36%), Gaps = 18/153 (11%)
Query: 116 ILKKLSSMAVMYLENNQLRGP----IPSLVGSLEFFSAYEANISGTIPDFIGTDTF---P 168
L ++ + ++ L N+ PS SLE E + + D F
Sbjct: 421 FLLRVPHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWDVFEGLS 480
Query: 169 QLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTT 228
L L L +N L P F S+L+ L LSL N+LT + + L
Sbjct: 481 HLQVLYLNHNYLNSLPPGVF-------SHLTALRGLSLNSNRLTVL-SHNDL--PANLEI 530
Query: 229 LNLTNNLLQGPTPRFNNSKLTVDMRTGS-NCFC 260
L+++ N L P P S +D+ C C
Sbjct: 531 LDISRNQLLAPNPDVFVSLSVLDITHNKFICEC 563
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} Length = 844 | Back alignment and structure |
|---|
Score = 62.5 bits (152), Expect = 3e-10
Identities = 23/124 (18%), Positives = 45/124 (36%), Gaps = 11/124 (8%)
Query: 117 LKKLSSMAVMYLENNQLRGPIPSLVGSLEFFSAYEANISGTIPDFIGTDTF---PQLSYL 173
L + + ++ P + L S ++S + + F L L
Sbjct: 236 LILAHHIMGAGFGFHNIKDPDQNTFAGLARSSVRHLDLSHGFVFSLNSRVFETLKDLKVL 295
Query: 174 DLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTN 233
+L N + +F L L+ L+L +N L ++ S+F PK+ ++L
Sbjct: 296 NLAYNKINKIADEAF-------YGLDNLQVLNLSYNLLGELYS-SNFYGLPKVAYIDLQK 347
Query: 234 NLLQ 237
N +
Sbjct: 348 NHIA 351
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} Length = 844 | Back alignment and structure |
|---|
Score = 59.8 bits (145), Expect = 2e-09
Identities = 29/126 (23%), Positives = 46/126 (36%), Gaps = 21/126 (16%)
Query: 119 KLSSMAVMYLENNQLRGPIPSLV----GSLEFFSAYEANISGTIPDFIGTDTF---PQLS 171
SS+ + L + + + S V L+ + I+ I D + F L
Sbjct: 264 ARSSVRHLDLSHGFVFS-LNSRVFETLKDLKVLNLAYNKIN-KIAD----EAFYGLDNLQ 317
Query: 172 YLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNL 231
L+L N L S+F L + + L N + I +F KL TL+L
Sbjct: 318 VLNLSYNLLGELYSSNF-------YGLPKVAYIDLQKNHIAIIQD-QTFKFLEKLQTLDL 369
Query: 232 TNNLLQ 237
+N L
Sbjct: 370 RDNALT 375
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} Length = 844 | Back alignment and structure |
|---|
Score = 57.5 bits (139), Expect = 1e-08
Identities = 26/135 (19%), Positives = 46/135 (34%), Gaps = 15/135 (11%)
Query: 108 NRKGTVPP-ILKKLSSMAVMYLENNQLRGPIPSLVGSLEFFSAYEANISGTIPDFIGTDT 166
N + K L + + L +N L I + + F + N T+P
Sbjct: 348 NHIAIIQDQTFKFLEKLQTLDLRDNALTT-IHFIPSIPDIFLSG--NKLVTLPKI----- 399
Query: 167 FPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKL 226
+ + L N L+ F + + L+ L L N+ + + + +P L
Sbjct: 400 NLTANLIHLSENRLENLDILYF------LLRVPHLQILILNQNRFSSCSGDQTPSENPSL 453
Query: 227 TTLNLTNNLLQGPTP 241
L L N+LQ
Sbjct: 454 EQLFLGENMLQLAWE 468
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} Length = 844 | Back alignment and structure |
|---|
Score = 53.3 bits (128), Expect = 2e-07
Identities = 31/149 (20%), Positives = 48/149 (32%), Gaps = 17/149 (11%)
Query: 114 PPILKKLSSMAVMYLENNQLRGPIPSLVGSLEFFSAYEA-NISGTIPDFIGTDTF---PQ 169
L ++ V+ L N L + S + ++ I TF +
Sbjct: 307 DEAFYGLDNLQVLNLSYNLLGE-LYS--SNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEK 363
Query: 170 LSYLDLGNNNLQGTIPSSFGMPFADIS--NLSTLED-------LSLGHNKLTGIFPVSSF 220
L LDL +N L TI +P +S L TL + L N+L + +
Sbjct: 364 LQTLDLRDNALT-TIHFIPSIPDIFLSGNKLVTLPKINLTANLIHLSENRLENLDILYFL 422
Query: 221 NNHPKLTTLNLTNNLLQGPTPRFNNSKLT 249
P L L L N + S+
Sbjct: 423 LRVPHLQILILNQNRFSSCSGDQTPSENP 451
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} Length = 844 | Back alignment and structure |
|---|
Score = 51.0 bits (122), Expect = 1e-06
Identities = 21/122 (17%), Positives = 40/122 (32%), Gaps = 12/122 (9%)
Query: 116 ILKKLSSMAVMYLENNQLRGPIPSLVGSLEFFSAYEANISGTIPDFIGTDTFPQLSYLDL 175
K ++ M LE + G ++ + F + IS + +
Sbjct: 194 WGKCMNPFRNMVLEILDVSGNGWTVDITGNFSN----AISKS--QAFSLILAHHIMGAGF 247
Query: 176 GNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNNL 235
G +N++ ++F S++ L L H + + F L LNL N
Sbjct: 248 GFHNIKDPDQNTF-----AGLARSSVRHLDLSHGFVFSL-NSRVFETLKDLKVLNLAYNK 301
Query: 236 LQ 237
+
Sbjct: 302 IN 303
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} Length = 844 | Back alignment and structure |
|---|
Score = 48.3 bits (115), Expect = 6e-06
Identities = 26/137 (18%), Positives = 44/137 (32%), Gaps = 6/137 (4%)
Query: 114 PPILKKLSSMAVMYLENNQLRGPIPSLV----GSLEFFSAYEANISGTIPDFIGTDTFPQ 169
+ L ++ + L NQ+R SL+ I +
Sbjct: 116 DGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQGKT 175
Query: 170 LSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTL 229
LS+ L N+L + +G N+ LE L + N T + N K
Sbjct: 176 LSFFSLAANSLYSRVSVDWGKCMNPFRNMV-LEILDVSGNGWTVDITGNFSNAISKSQAF 234
Query: 230 NLT-NNLLQGPTPRFNN 245
+L + + G F+N
Sbjct: 235 SLILAHHIMGAGFGFHN 251
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} Length = 844 | Back alignment and structure |
|---|
Score = 47.1 bits (112), Expect = 1e-05
Identities = 20/154 (12%), Positives = 44/154 (28%), Gaps = 19/154 (12%)
Query: 108 NRKGTVPP-ILKKLSSMAVMYLENNQLR------GPIPSLVGSLEFFSAYEANISGTIPD 160
++ + P + L + + L L G +L +L + I ++
Sbjct: 83 SKIYFLHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLK-ALTRLDLSKNQIR-SLYL 140
Query: 161 FIGTDTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSF 220
L +D +N + + + L SL N L V
Sbjct: 141 HPSFGKLNSLKSIDFSSNQIFLVCEHEL----EPLQGKT-LSFFSLAANSLYSRVSVDWG 195
Query: 221 N-----NHPKLTTLNLTNNLLQGPTPRFNNSKLT 249
+ L L+++ N ++ ++
Sbjct: 196 KCMNPFRNMVLEILDVSGNGWTVDITGNFSNAIS 229
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} Length = 844 | Back alignment and structure |
|---|
Score = 45.6 bits (108), Expect = 5e-05
Identities = 25/131 (19%), Positives = 44/131 (33%), Gaps = 36/131 (27%)
Query: 104 LQDQNRKGTVPPILKKLSSMAVMYLENNQLRGPIPSLVGSLEFFSAYEANISGTIPDFIG 163
LQ + + LS + V+YL +N L ++P +
Sbjct: 463 LQLAWETELCWDVFEGLSHLQVLYLNHNYLN----------------------SLPPGVF 500
Query: 164 TDTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNH 223
+ L L L +N L + + LE L + N+L P +
Sbjct: 501 SH-LTALRGLSLNSNRLTVLSHNDL---------PANLEILDISRNQLLAPNP----DVF 546
Query: 224 PKLTTLNLTNN 234
L+ L++T+N
Sbjct: 547 VSLSVLDITHN 557
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} Length = 457 | Back alignment and structure |
|---|
Score = 64.7 bits (158), Expect = 4e-11
Identities = 26/135 (19%), Positives = 46/135 (34%), Gaps = 19/135 (14%)
Query: 103 ELQDQNRKGTVPPILKKLSSMAVMYLENNQLRGPIPSLVGSLEFFSAYEANISGTIPDFI 162
EL K + + + + N++ S L + NI+ +
Sbjct: 152 ELDCHLNKKITKLDVTPQTQLTTLDCSFNKITELDVSQNKLLNRLNCDTNNITK-----L 206
Query: 163 GTDTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNN 222
+ QL++LD +N L + D++ L+ L N LT + +
Sbjct: 207 DLNQNIQLTFLDCSSNKL-----TEI-----DVTPLTQLTYFDCSVNPLTEL----DVST 252
Query: 223 HPKLTTLNLTNNLLQ 237
KLTTL+ L
Sbjct: 253 LSKLTTLHCIQTDLL 267
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} Length = 457 | Back alignment and structure |
|---|
Score = 63.6 bits (155), Expect = 7e-11
Identities = 23/121 (19%), Positives = 40/121 (33%), Gaps = 18/121 (14%)
Query: 117 LKKLSSMAVMYLENNQLRGPIPSLVGSLEFFSAYEANISGTIPDFIGTDTFPQLSYLDLG 176
+ + + + N L S L + T D QL+ LD
Sbjct: 123 VSQNPLLTYLNCARNTLTEIDVSHNTQLTELDCHLNKKI-TKLDVTP---QTQLTTLDCS 178
Query: 177 NNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNNLL 236
N + + D+S L L+ N +T + N + +LT L+ ++N L
Sbjct: 179 FNKIT-EL---------DVSQNKLLNRLNCDTNNITKL----DLNQNIQLTFLDCSSNKL 224
Query: 237 Q 237
Sbjct: 225 T 225
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} Length = 457 | Back alignment and structure |
|---|
Score = 58.2 bits (141), Expect = 4e-09
Identities = 24/134 (17%), Positives = 49/134 (36%), Gaps = 19/134 (14%)
Query: 117 LKKLSSMAVMYLENNQLRGPIPSLVGSLEFFSAYEANISGTIPDFIGTDTFPQLSYLDLG 176
++KL+ + + +N + S +L + + ++ + +L+YL+
Sbjct: 60 IEKLTGLTKLICTSNNITTLDLSQNTNLTYLACDSNKLT-NLD----VTPLTKLTYLNCD 114
Query: 177 NNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNNLL 236
N L D+S L L+ N LT I +++ +LT L+ N
Sbjct: 115 TNKLTKL----------DVSQNPLLTYLNCARNTLTEI----DVSHNTQLTELDCHLNKK 160
Query: 237 QGPTPRFNNSKLTV 250
++LT
Sbjct: 161 ITKLDVTPQTQLTT 174
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} Length = 457 | Back alignment and structure |
|---|
Score = 56.2 bits (136), Expect = 2e-08
Identities = 24/108 (22%), Positives = 40/108 (37%), Gaps = 19/108 (17%)
Query: 143 SLEFFSAYEANISGTIPDFIGTDTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLE 202
+L + ++I+ + + L+ L +NN+ ++ D+S + L
Sbjct: 43 TLTSLDCHNSSIT-DMTGI---EKLTGLTKLICTSNNI-----TTL-----DLSQNTNLT 88
Query: 203 DLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNNLLQGPTPRFNNSKLTV 250
L+ NKLT + KLT LN N L N LT
Sbjct: 89 YLACDSNKLTNL----DVTPLTKLTYLNCDTNKLT-KLDVSQNPLLTY 131
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} Length = 457 | Back alignment and structure |
|---|
Score = 55.1 bits (133), Expect = 4e-08
Identities = 23/105 (21%), Positives = 36/105 (34%), Gaps = 14/105 (13%)
Query: 146 FFSAYEANISGTIPDFIGTDTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLS 205
F S A D I + L+ LD N+++ + I L+ L L
Sbjct: 20 FASEVAAAFEMQATDTISEEQLATLTSLDCHNSSIT-DMT--------GIEKLTGLTKLI 70
Query: 206 LGHNKLTGIFPVSSFNNHPKLTTLNLTNNLLQGPTPRFNNSKLTV 250
N +T + + + LT L +N L +KLT
Sbjct: 71 CTSNNITTL----DLSQNTNLTYLACDSNKLTN-LDVTPLTKLTY 110
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} Length = 457 | Back alignment and structure |
|---|
Score = 54.7 bits (132), Expect = 5e-08
Identities = 23/151 (15%), Positives = 43/151 (28%), Gaps = 40/151 (26%)
Query: 102 IELQDQNRKGTVPPILKKLSSMAVMYLENNQLRGPIPSLVGSLEFFSAYEANISGTIPDF 161
I Q + + + + + ++ + + L+
Sbjct: 278 IYFQAEGCRKIKELDVTHNTQLYLLDCQAAGIT--------ELDLSQ------------- 316
Query: 162 IGTDTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFN 221
P+L YL L N L + D+S+ + L+ LS + + SS
Sbjct: 317 -----NPKLVYLYLNNTEL-----TEL-----DVSHNTKLKSLSCVNAHIQDF---SSVG 358
Query: 222 NHPKLTTLNLTNNLLQG-PTPRFNNSKLTVD 251
P L P N+ LT+
Sbjct: 359 KIPALNNNFEAEGQTITMPKETLTNNSLTIA 389
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} Length = 457 | Back alignment and structure |
|---|
Score = 54.3 bits (131), Expect = 6e-08
Identities = 20/134 (14%), Positives = 38/134 (28%), Gaps = 19/134 (14%)
Query: 117 LKKLSSMAVMYLENNQLRGPIPSLVGSLEFFSAYEANISGTIPDFIGTDTFPQLSYLDLG 176
+ + + + + N + + L F ++ I QL+Y D
Sbjct: 187 VSQNKLLNRLNCDTNNITKLDLNQNIQLTFLDCSSNKLT-EID----VTPLTQLTYFDCS 241
Query: 177 NNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNNLL 236
N L + +S LS L L L I ++ L
Sbjct: 242 VNPLT-ELD---------VSTLSKLTTLHCIQTDLLEI-DLTHNTQ---LIYFQAEGCRK 287
Query: 237 QGPTPRFNNSKLTV 250
+N++L +
Sbjct: 288 IKELDVTHNTQLYL 301
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} Length = 457 | Back alignment and structure |
|---|
Score = 50.5 bits (121), Expect = 1e-06
Identities = 17/103 (16%), Positives = 31/103 (30%), Gaps = 14/103 (13%)
Query: 148 SAYEANISGTIPDFIGTDTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLG 207
+ +A + + D+ D F L+TL L
Sbjct: 1 NTLKAGQTQSFNDWFPDDNFASEVAAAFEMQATDTI----------SEEQLATLTSLDCH 50
Query: 208 HNKLTGIFPVSSFNNHPKLTTLNLTNNLLQGPTPRFNNSKLTV 250
++ +T + + LT L T+N + N+ LT
Sbjct: 51 NSSITDMTGIEKLTG---LTKLICTSNNITTL-DLSQNTNLTY 89
|
| >2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens} Length = 220 | Back alignment and structure |
|---|
Score = 62.0 bits (151), Expect = 5e-11
Identities = 34/167 (20%), Positives = 57/167 (34%), Gaps = 32/167 (19%)
Query: 86 CQWSHVICSDDG----------QVTNIELQDQNRKGTVPP--ILKKLSSMAVMYLENNQL 133
C+ + V CS+ + L + N + I KKL + + NN++
Sbjct: 11 CEGTTVDCSNQKLNKIPEHIPQYTAELRLNN-NEFTVLEATGIFKKLPQLRKINFSNNKI 69
Query: 134 RGPIPSLV----GSLEFFSAYEANISGTIP--DFIGTDTFPQLSYLDLGNNNLQGTIPSS 187
I + + + F L L L +N + S
Sbjct: 70 TD-IEEGAFEGASGVNEILLTSNRLE-NVQHKMF---KGLESLKTLMLRSNRITCVGNDS 124
Query: 188 FGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNN 234
F LS++ LSL N++T + +F+ L+TLNL N
Sbjct: 125 F-------IGLSSVRLLSLYDNQITTV-APGAFDTLHSLSTLNLLAN 163
|
| >2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens} Length = 220 | Back alignment and structure |
|---|
Score = 41.2 bits (97), Expect = 4e-04
Identities = 10/39 (25%), Positives = 18/39 (46%)
Query: 199 STLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNNLLQ 237
+L L +N+ T + F P+L +N +NN +
Sbjct: 32 QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKIT 70
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 64.4 bits (157), Expect = 6e-11
Identities = 21/147 (14%), Positives = 40/147 (27%), Gaps = 30/147 (20%)
Query: 107 QNRKGTVPP-ILKKLSSMAVMYLENNQLRGPIPSLVGSLEFFSAYEANISGTIPDFIGTD 165
Q + L + + +EN+++ +P F
Sbjct: 295 QFYLFYDLSTVYSLLEKVKRITVENSKVFL-VPC-----SFSQH---------------- 332
Query: 166 TFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVS-SFNNHP 224
L +LDL N + + +L+ L L N L +
Sbjct: 333 -LKSLEFLDLSENLMVEEYLKNSA----CKGAWPSLQTLVLSQNHLRSMQKTGEILLTLK 387
Query: 225 KLTTLNLTNNLLQGPTPRFNN-SKLTV 250
LT+L+++ N K+
Sbjct: 388 NLTSLDISRNTFHPMPDSCQWPEKMRF 414
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 62.0 bits (151), Expect = 3e-10
Identities = 24/136 (17%), Positives = 43/136 (31%), Gaps = 14/136 (10%)
Query: 107 QNRKGTVPP-ILKKLSSMAVMYLENNQLRGPIPSLV----GSLEFFSAYEANISGTIPDF 161
+R T+ L S+ + L +N L + S SL++ + T+
Sbjct: 59 SSRINTIEGDAFYSLGSLEHLDLSDNHLSS-LSSSWFGPLSSLKYLNLMGNPYQ-TLGVT 116
Query: 162 IGTDTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFN 221
L L +GN I D + L++L +L + L S
Sbjct: 117 SLFPNLTNLQTLRIGNVETFSEIRRI------DFAGLTSLNELEIKALSLRNY-QSQSLK 169
Query: 222 NHPKLTTLNLTNNLLQ 237
+ + L L +
Sbjct: 170 SIRDIHHLTLHLSESA 185
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 61.3 bits (149), Expect = 5e-10
Identities = 25/131 (19%), Positives = 47/131 (35%), Gaps = 16/131 (12%)
Query: 107 QNRKGTVPPILKKLSSMAVMYLENNQLRGPIPSLVGSLEFFSAYEANISGTIPDFIGTDT 166
+N +P + M + L + +R + +LE N+ + F+
Sbjct: 396 RNTFHPMPDSCQWPEKMRFLNLSSTGIRVVKTCIPQTLEVLDVSNNNLD-SFSLFL---- 450
Query: 167 FPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKL 226
P+L L + N L+ T+P + S L + + N+L + P F+ L
Sbjct: 451 -PRLQELYISRNKLK-TLPDA--------SLFPVLLVMKISRNQLKSV-PDGIFDRLTSL 499
Query: 227 TTLNLTNNLLQ 237
+ L N
Sbjct: 500 QKIWLHTNPWD 510
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 60.1 bits (146), Expect = 1e-09
Identities = 32/127 (25%), Positives = 55/127 (43%), Gaps = 16/127 (12%)
Query: 112 TVPPILKKLSSMAVMYLENNQLRGPIPSLVGSLEFFSAYEA-NISGTIPDFIGTDTF--- 167
++P L ++M + L N++ I G L + + + + + I D F
Sbjct: 19 SIPSGL--TAAMKSLDLSFNKITY-IGH--GDLRACANLQVLILKSSRINTIEGDAFYSL 73
Query: 168 PQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLT 227
L +LDL +N+L ++ SS+ LS+L+ L+L N + S F N L
Sbjct: 74 GSLEHLDLSDNHLS-SLSSSW------FGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQ 126
Query: 228 TLNLTNN 234
TL + N
Sbjct: 127 TLRIGNV 133
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 57.4 bits (139), Expect = 7e-09
Identities = 28/177 (15%), Positives = 57/177 (32%), Gaps = 34/177 (19%)
Query: 98 QVTNIELQDQNRKGTVPP-ILKKLSSMAVMYLENNQLRGPIP------SLVGSLEFFSAY 150
+V I +++ ++ VP + L S+ + L N + SL+
Sbjct: 311 KVKRITVEN-SKVFLVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLS 369
Query: 151 EANISGTIPDFIGT-DTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHN 209
+ ++ ++ T L+ LD+ N +P S + L+L
Sbjct: 370 QNHLR-SMQKTGEILLTLKNLTSLDISRNTFH-PMPDSC-------QWPEKMRFLNLSST 420
Query: 210 KLTGIFP---------------VSSFNNH-PKLTTLNLTNNLLQGPTPRFNNSKLTV 250
+ + + SF+ P+L L ++ N L+ L V
Sbjct: 421 GIRVVKTCIPQTLEVLDVSNNNLDSFSLFLPRLQELYISRNKLKTLPDASLFPVLLV 477
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 54.3 bits (131), Expect = 6e-08
Identities = 15/95 (15%), Positives = 39/95 (41%), Gaps = 9/95 (9%)
Query: 143 SLEFFSAYEANISGTIPDFIGTDTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLE 202
+L + + S + + +G + L + L + + + S L ++
Sbjct: 262 TLNGLGDFNPSESDVVSE-LGKVETVTIRRLHIPQFYLFYDLSTVY-------SLLEKVK 313
Query: 203 DLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNNLLQ 237
+++ ++K+ + P S + L L+L+ NL+
Sbjct: 314 RITVENSKVFLV-PCSFSQHLKSLEFLDLSENLMV 347
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 50.1 bits (120), Expect = 1e-06
Identities = 13/70 (18%), Positives = 23/70 (32%), Gaps = 11/70 (15%)
Query: 168 PQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLT 227
D + + +IPS + ++ L L NK+T I L
Sbjct: 5 DASGVCDGRSRSFT-SIPSGL---------TAAMKSLDLSFNKITYI-GHGDLRACANLQ 53
Query: 228 TLNLTNNLLQ 237
L L ++ +
Sbjct: 54 VLILKSSRIN 63
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 45.1 bits (107), Expect = 5e-05
Identities = 18/168 (10%), Positives = 40/168 (23%), Gaps = 33/168 (19%)
Query: 98 QVTNIELQDQNRKGTVPP-ILKKLSSMAVMYLENNQLRGPIPSLVGSLEFFSAYEANISG 156
+ + + + + L+S+ + ++ LR + S+
Sbjct: 124 NLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQSLKSI------------ 171
Query: 157 TIPDFIGTDTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFP 216
+ +L L + + LS++ L L L
Sbjct: 172 -----------RDIHHLTLHLSESAFLLEIFA-------DILSSVRYLELRDTNLARFQF 213
Query: 217 VSSFNNHPKLTTLNLTNNLLQGPTPR-FNNSKLTVDMRTGSNCFCLDD 263
S + + T FN + + DD
Sbjct: 214 -SPLPVDEVSSPMKKLAFRGSVLTDESFNELLKLLRYILELSEVEFDD 260
|
| >2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681 | Back alignment and structure |
|---|
Score = 64.5 bits (157), Expect = 6e-11
Identities = 33/212 (15%), Positives = 60/212 (28%), Gaps = 73/212 (34%)
Query: 425 RLGRGGVGTVYKGE--LKDGTEVGVKRMELGSVTEQGIAQFESE------------ITVL 470
+ GG+G +Y +G V +K + + S + A +E + +
Sbjct: 87 CIAHGGLGWIYLALDRNVNGRPVVLKGL-VHSGDAEAQAMAMAERQFLAEVVHPSIVQIF 145
Query: 471 TKG---------------------TLGRHLFNWEEEGLEPLEWNTRLNIALDVARG---- 505
+L R + L + L++
Sbjct: 146 NFVEHTDRHGDPVGYIVMEYVGGQSLKRSKG-------QKLPVAEAIAYLLEILPALSYL 198
Query: 506 -------------------DDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTG 546
+ +++ D G V + G + GT G+ APE IV
Sbjct: 199 HSIGLVYNDLKPENIMLTEEQLKLIDLGAVSRINSFGY------LYGTPGFQAPE-IVRT 251
Query: 547 RITAKVDVYSFGMILMDLITGRKVVDATHSDP 578
T D+Y+ G L L + + D
Sbjct: 252 GPTVATDIYTVGRTLAALTLDLPTRNGRYVDG 283
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} Length = 520 | Back alignment and structure |
|---|
Score = 64.1 bits (156), Expect = 6e-11
Identities = 23/138 (16%), Positives = 50/138 (36%), Gaps = 10/138 (7%)
Query: 116 ILKKLSSMAVMYLENNQLRG---PIPSLVGSLEFFSAYEANISGTIPDFIGTDTFPQLSY 172
I + S+M + + R PS + ++ T+ + +L
Sbjct: 295 IYEIFSNMNIKNFTVSGTRMVHMLCPSKISPFLHLDFSNNLLTDTVFENC--GHLTELET 352
Query: 173 LDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLT 232
L L N L+ + M + + +L+ L + N ++ + L +LN++
Sbjct: 353 LILQMNQLK-ELSKIAEM----TTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMS 407
Query: 233 NNLLQGPTPRFNNSKLTV 250
+N+L R ++ V
Sbjct: 408 SNILTDTIFRCLPPRIKV 425
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} Length = 520 | Back alignment and structure |
|---|
Score = 59.5 bits (144), Expect = 2e-09
Identities = 23/123 (18%), Positives = 49/123 (39%), Gaps = 17/123 (13%)
Query: 116 ILKKLSSMAVMYLENNQLRGPIPSLV----GSLEFFSAYEANISGTIPDFIGTDTFPQLS 171
+ ++ S+ + + N + SL + ++ TI + P++
Sbjct: 369 MTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCL----PPRIK 424
Query: 172 YLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNL 231
LDL +N ++ +IP + L L++L++ N+L + P F+ L + L
Sbjct: 425 VLDLHSNKIK-SIP-------KQVVKLEALQELNVASNQLKSV-PDGIFDRLTSLQKIWL 475
Query: 232 TNN 234
N
Sbjct: 476 HTN 478
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} Length = 520 | Back alignment and structure |
|---|
Score = 57.6 bits (139), Expect = 7e-09
Identities = 18/80 (22%), Positives = 35/80 (43%), Gaps = 12/80 (15%)
Query: 158 IPDFIGTDTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPV 217
+P + T + L++ N + S +LS L L + HN++ + +
Sbjct: 15 VPKDLSQKT----TILNISQNYISELWTSDI-------LSLSKLRILIISHNRIQYL-DI 62
Query: 218 SSFNNHPKLTTLNLTNNLLQ 237
S F + +L L+L++N L
Sbjct: 63 SVFKFNQELEYLDLSHNKLV 82
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} Length = 520 | Back alignment and structure |
|---|
Score = 56.0 bits (135), Expect = 2e-08
Identities = 29/153 (18%), Positives = 51/153 (33%), Gaps = 22/153 (14%)
Query: 106 DQNRKGTVPP-ILKKLSSMAVMYLENNQLRGPIPSLVG------SLEFFSAYEANISGTI 158
N L+ + + L+ NQL+ + + SL+ + ++S
Sbjct: 332 SNNLLTDTVFENCGHLTELETLILQMNQLKE-LSKIAEMTTQMKSLQQLDISQNSVSYDE 390
Query: 159 PDFIGTDTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVS 218
L L++ +N L TI ++ L L NK+ I P
Sbjct: 391 KKGD-CSWTKSLLSLNMSSNILTDTIFRCL---------PPRIKVLDLHSNKIKSI-PKQ 439
Query: 219 SFNNHPKLTTLNLTNNLLQG-PTPRFNN-SKLT 249
L LN+ +N L+ P F+ + L
Sbjct: 440 VVKL-EALQELNVASNQLKSVPDGIFDRLTSLQ 471
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} Length = 520 | Back alignment and structure |
|---|
Score = 55.3 bits (133), Expect = 4e-08
Identities = 22/124 (17%), Positives = 39/124 (31%), Gaps = 39/124 (31%)
Query: 117 LKKLSSMAVMYLENNQLRGPIPSLVGSLEFFSAYEANISGTIPDFIGTDTF---PQLSYL 173
+ LS + ++ + +N+++ + F +L YL
Sbjct: 41 ILSLSKLRILIISHNRIQ----------------------YLDI----SVFKFNQELEYL 74
Query: 174 DLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTN 233
DL +N L I L+ L L N + F N +L L L+
Sbjct: 75 DLSHNKLV-KISCH---------PTVNLKHLDLSFNAFDALPICKEFGNMSQLKFLGLST 124
Query: 234 NLLQ 237
L+
Sbjct: 125 THLE 128
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} Length = 520 | Back alignment and structure |
|---|
Score = 44.5 bits (105), Expect = 9e-05
Identities = 12/65 (18%), Positives = 25/65 (38%), Gaps = 11/65 (16%)
Query: 173 LDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLT 232
+D N L +P + L++ N ++ + S + KL L ++
Sbjct: 5 VDRSKNGLI-HVPK--DLS-------QKTTILNISQNYISEL-WTSDILSLSKLRILIIS 53
Query: 233 NNLLQ 237
+N +Q
Sbjct: 54 HNRIQ 58
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} Length = 520 | Back alignment and structure |
|---|
Score = 43.7 bits (103), Expect = 1e-04
Identities = 20/152 (13%), Positives = 44/152 (28%), Gaps = 13/152 (8%)
Query: 106 DQNRKGTVPP-ILKKLSSMAVMYLENNQLRG-PIPSLVGSLEFFSAYEANISGTIPDFIG 163
NR + + K + + L +N+L V +L+ +P
Sbjct: 53 SHNRIQYLDISVFKFNQELEYLDLSHNKLVKISCHPTV-NLKHLDLSFNAFD-ALPICKE 110
Query: 164 TDTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNN- 222
QL +L L +L+ + I++L+ + L + +
Sbjct: 111 FGNMSQLKFLGLSTTHLEKS-------SVLPIAHLNISKVLLVLGETYGEKEDPEGLQDF 163
Query: 223 -HPKLTTLNLTNNLLQGPTPRFNNSKLTVDMR 253
L + TN + +++
Sbjct: 164 NTESLHIVFPTNKEFHFILDVSVKTVANLELS 195
|
| >1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A Length = 605 | Back alignment and structure |
|---|
Score = 64.0 bits (155), Expect = 7e-11
Identities = 33/136 (24%), Positives = 52/136 (38%), Gaps = 19/136 (13%)
Query: 117 LKKLSSMAVMYLENNQLR--GPIPSLVGSLEFFSAYEANISGTIPDFIGTDTFPQLSYLD 174
L L ++ ++L+ N+++ + L L+ S IS I PQL L
Sbjct: 83 LTNLKNLGWLFLDENKIKDLSSLKDLK-KLKSLSLEHNGIS-DINGL---VHLPQLESLY 137
Query: 175 LGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNN 234
LGNN + +S L+ L+ LSL N+++ I KL L L+ N
Sbjct: 138 LGNNKITDITV---------LSRLTKLDTLSLEDNQISDI---VPLAGLTKLQNLYLSKN 185
Query: 235 LLQGPTPRFNNSKLTV 250
+ L V
Sbjct: 186 HISDLRALAGLKNLDV 201
|
| >1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A Length = 605 | Back alignment and structure |
|---|
Score = 62.4 bits (151), Expect = 2e-10
Identities = 30/155 (19%), Positives = 60/155 (38%), Gaps = 21/155 (13%)
Query: 98 QVTNIELQDQNRKGTVPPILKKLSSMAVMYLENNQLR--GPIPSLVGSLEFFSAYEANIS 155
+ L+ ++ V +L+S+ + N+ ++ I L ++ ++
Sbjct: 22 ETIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIKSVQGIQYLP-NVTKLFLNGNKLT 78
Query: 156 GTIPDFIGTDTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIF 215
D L +L L N ++ + S + +L L+ LSL HN ++ I
Sbjct: 79 ----DIKPLTNLKNLGWLFLDENKIK-DLSS--------LKDLKKLKSLSLEHNGISDI- 124
Query: 216 PVSSFNNHPKLTTLNLTNNLLQGPTPRFNNSKLTV 250
+ + P+L +L L NN + T +KL
Sbjct: 125 --NGLVHLPQLESLYLGNNKITDITVLSRLTKLDT 157
|
| >1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A Length = 605 | Back alignment and structure |
|---|
Score = 54.7 bits (131), Expect = 6e-08
Identities = 24/120 (20%), Positives = 43/120 (35%), Gaps = 19/120 (15%)
Query: 117 LKKLSSMAVMYLENNQLR--GPIPSLVGSLEFFSAYEANISGTIPDFIGTDTFPQLSYLD 174
LK L + + LE+N + + L LE I+ D +L L
Sbjct: 105 LKDLKKLKSLSLEHNGISDINGLVHLP-QLESLYLGNNKIT----DITVLSRLTKLDTLS 159
Query: 175 LGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNN 234
L +N + I ++ L+ L++L L N ++ + + L L L +
Sbjct: 160 LEDNQIS-DIVP--------LAGLTKLQNLYLSKNHISDL---RALAGLKNLDVLELFSQ 207
|
| >1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A Length = 605 | Back alignment and structure |
|---|
Score = 52.4 bits (125), Expect = 3e-07
Identities = 14/93 (15%), Positives = 31/93 (33%), Gaps = 12/93 (12%)
Query: 158 IPDFIGTDTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPV 217
I D F + +L ++ + + L++++ + ++ + + +
Sbjct: 11 IKQIFPDDAFAETIKDNLKKKSVTDAVT---------QNELNSIDQIIANNSDIKSVQGI 61
Query: 218 SSFNNHPKLTTLNLTNNLLQGPTPRFNNSKLTV 250
P +T L L N L P N L
Sbjct: 62 QYL---PNVTKLFLNGNKLTDIKPLTNLKNLGW 91
|
| >1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A Length = 605 | Back alignment and structure |
|---|
Score = 46.6 bits (110), Expect = 2e-05
Identities = 25/135 (18%), Positives = 45/135 (33%), Gaps = 17/135 (12%)
Query: 117 LKKLSSMAVMYLENNQLRG--PIPSLVGSLEFFSAYEANISGTIPDFIGTDTFPQLSYLD 174
L L + +YL NN++ + L L+ S + IS I +L L
Sbjct: 127 LVHLPQLESLYLGNNKITDITVLSRLT-KLDTLSLEDNQIS-DIVPL---AGLTKLQNLY 181
Query: 175 LGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNN 234
L N++ ++ L L+ L L + + +N T+ T+
Sbjct: 182 LSKNHIS---------DLRALAGLKNLDVLELFSQECLNKPI-NHQSNLVVPNTVKNTDG 231
Query: 235 LLQGPTPRFNNSKLT 249
L P ++
Sbjct: 232 SLVTPEIISDDGDYE 246
|
| >4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} Length = 294 | Back alignment and structure |
|---|
Score = 62.2 bits (152), Expect = 1e-10
Identities = 41/202 (20%), Positives = 71/202 (35%), Gaps = 68/202 (33%)
Query: 425 RLGRGGVGTVYKGE-LKDGTEVGVK--RMELGSVTEQGIAQFESE------------ITV 469
+LG GG+ TVY E +V +K + E+ + +FE E +++
Sbjct: 18 KLGGGGMSTVYLAEDTILNIKVAIKAIFIPPRE-KEETLKRFEREVHNSSQLSHQNIVSM 76
Query: 470 LTKG----------------TLGRHLFNWEEEGLEPLEWNTRLNIALDVARG-------- 505
+ TL ++ E G PL +T +N + G
Sbjct: 77 IDVDEEDDCYYLVMEYIEGPTLSEYI---ESHG--PLSVDTAINFTNQILDGIKHAHDMR 131
Query: 506 --------------DDMRV--ADFGLVRLVPENGKHSILTK---VAGTFGYLAPEYIVTG 546
+ + DFG+ + + E LT+ V GT Y +PE
Sbjct: 132 IVHRDIKPQNILIDSNKTLKIFDFGIAKALSETS----LTQTNHVLGTVQYFSPEQAKGE 187
Query: 547 RITAKVDVYSFGMILMDLITGR 568
D+YS G++L +++ G
Sbjct: 188 ATDECTDIYSIGIVLYEMLVGE 209
|
| >2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A* Length = 276 | Back alignment and structure |
|---|
Score = 61.5 bits (150), Expect = 1e-10
Identities = 30/176 (17%), Positives = 56/176 (31%), Gaps = 36/176 (20%)
Query: 84 DPCQ----WSHVICSDDG----------QVTNIELQDQNRKGTVPP-ILKKLSSMAVMYL 128
+PC C + N++L N + + V+ L
Sbjct: 1 EPCVEVVPNITYQCMELNFYKIPDNLPFSTKNLDLSF-NPLRHLGSYSFFSFPELQVLDL 59
Query: 129 ENNQLRGPIPSLV----GSLEFFSAYEANISGTIPDFIGTDTF---PQLSYLDLGNNNLQ 181
+++ I L I ++ F L L NL
Sbjct: 60 SRCEIQT-IEDGAYQSLSHLSTLILTGNPIQ-SLA----LGAFSGLSSLQKLVAVETNLA 113
Query: 182 GTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNNLLQ 237
++ + P +L TL++L++ HN + F+N L L+L++N +Q
Sbjct: 114 -SLENF---PI---GHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQ 162
|
| >2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A* Length = 276 | Back alignment and structure |
|---|
Score = 55.0 bits (133), Expect = 2e-08
Identities = 31/156 (19%), Positives = 61/156 (39%), Gaps = 24/156 (15%)
Query: 106 DQNRKGTVPP-ILKKLSSMAVMYLENNQLRGPIPSLV----GSLEFFSAYEANISGTIPD 160
+ T+ + LS ++ + L N ++ + SL+ A E N++ ++ +
Sbjct: 60 SRCEIQTIEDGAYQSLSHLSTLILTGNPIQS-LALGAFSGLSSLQKLVAVETNLA-SLEN 117
Query: 161 FIGTDTFPQLSYLDLGNNNLQGTIPSS--FGMPFADISNLSTLEDLSLGHNKLTGIFPVS 218
F L L++ +N +Q + F SNL+ LE L L NK+ I +
Sbjct: 118 FP-IGHLKTLKELNVAHNLIQ-SFKLPEYF-------SNLTNLEHLDLSSNKIQSI-YCT 167
Query: 219 SFNNHPKLT----TLNLTNNLLQG-PTPRFNNSKLT 249
++ +L+L+ N + F +L
Sbjct: 168 DLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEIRLK 203
|
| >2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A* Length = 276 | Back alignment and structure |
|---|
Score = 55.0 bits (133), Expect = 2e-08
Identities = 27/141 (19%), Positives = 48/141 (34%), Gaps = 20/141 (14%)
Query: 106 DQNRKGTVPP-ILKKLSSMAVMYLENNQLRGPIPSLV----GSLEFFSAYEANISGTIPD 160
N ++ LSS+ + L + + +L+ + I
Sbjct: 84 TGNPIQSLALGAFSGLSSLQKLVAVETNLAS-LENFPIGHLKTLKELNVAHNLIQ----S 138
Query: 161 FIGTDTF---PQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLE-DLSLGHNKLTGIFP 216
F + F L +LDL +N +Q +I + + + L L L N + I
Sbjct: 139 FKLPEYFSNLTNLEHLDLSSNKIQ-SIYCT---DLRVLHQMPLLNLSLDLSLNPMNFI-Q 193
Query: 217 VSSFNNHPKLTTLNLTNNLLQ 237
+F +L L L N L+
Sbjct: 194 PGAFKE-IRLKELALDTNQLK 213
|
| >1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A Length = 291 | Back alignment and structure |
|---|
Score = 61.6 bits (150), Expect = 2e-10
Identities = 34/136 (25%), Positives = 53/136 (38%), Gaps = 19/136 (13%)
Query: 117 LKKLSSMAVMYLENNQLR--GPIPSLVGSLEFFSAYEANISGTIPDFIGTDTFPQLSYLD 174
L L ++ ++L+ N+++ + L L+ S IS I PQL L
Sbjct: 86 LANLKNLGWLFLDENKVKDLSSLKDLK-KLKSLSLEHNGIS-DINGL---VHLPQLESLY 140
Query: 175 LGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNN 234
LGNN + I +S L+ L+ LSL N+++ I KL L L+ N
Sbjct: 141 LGNNKIT-DITV--------LSRLTKLDTLSLEDNQISDI---VPLAGLTKLQNLYLSKN 188
Query: 235 LLQGPTPRFNNSKLTV 250
+ L V
Sbjct: 189 HISDLRALAGLKNLDV 204
|
| >1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A Length = 291 | Back alignment and structure |
|---|
Score = 57.4 bits (139), Expect = 3e-09
Identities = 26/134 (19%), Positives = 49/134 (36%), Gaps = 17/134 (12%)
Query: 117 LKKLSSMAVMYLENNQLRGPIP-SLVGSLEFFSAYEANISGTIPDFIGTDTFPQLSYLDL 175
+ L+ + + + + S++ A ++I G P ++ L L
Sbjct: 20 DDAFAETIKDNLKKKSVTDAVTQNELNSIDQIIANNSDIK----SVQGIQYLPNVTKLFL 75
Query: 176 GNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNNL 235
N L P ++NL L L L NK+ + SS + KL +L+L +N
Sbjct: 76 NGNKLTDIKP---------LANLKNLGWLFLDENKVKDL---SSLKDLKKLKSLSLEHNG 123
Query: 236 LQGPTPRFNNSKLT 249
+ + +L
Sbjct: 124 ISDINGLVHLPQLE 137
|
| >1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A Length = 291 | Back alignment and structure |
|---|
Score = 56.2 bits (136), Expect = 8e-09
Identities = 24/120 (20%), Positives = 43/120 (35%), Gaps = 19/120 (15%)
Query: 117 LKKLSSMAVMYLENNQLR--GPIPSLVGSLEFFSAYEANISGTIPDFIGTDTFPQLSYLD 174
LK L + + LE+N + + L LE I+ D +L L
Sbjct: 108 LKDLKKLKSLSLEHNGISDINGLVHLP-QLESLYLGNNKIT----DITVLSRLTKLDTLS 162
Query: 175 LGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNN 234
L +N + I ++ L+ L++L L N ++ + + L L L +
Sbjct: 163 LEDNQIS-DIVP--------LAGLTKLQNLYLSKNHISDL---RALAGLKNLDVLELFSQ 210
|
| >1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A Length = 291 | Back alignment and structure |
|---|
Score = 50.1 bits (120), Expect = 8e-07
Identities = 14/93 (15%), Positives = 31/93 (33%), Gaps = 12/93 (12%)
Query: 158 IPDFIGTDTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPV 217
I D F + +L ++ + + L++++ + ++ + + +
Sbjct: 14 IKQIFSDDAFAETIKDNLKKKSVTDAVT---------QNELNSIDQIIANNSDIKSVQGI 64
Query: 218 SSFNNHPKLTTLNLTNNLLQGPTPRFNNSKLTV 250
N +T L L N L P N L
Sbjct: 65 QYLPN---VTKLFLNGNKLTDIKPLANLKNLGW 94
|
| >1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A Length = 291 | Back alignment and structure |
|---|
Score = 48.5 bits (116), Expect = 3e-06
Identities = 26/135 (19%), Positives = 47/135 (34%), Gaps = 17/135 (12%)
Query: 117 LKKLSSMAVMYLENNQLRG--PIPSLVGSLEFFSAYEANISGTIPDFIGTDTFPQLSYLD 174
L L + +YL NN++ + L L+ S + IS I +L L
Sbjct: 130 LVHLPQLESLYLGNNKITDITVLSRLT-KLDTLSLEDNQIS-DIVPL---AGLTKLQNLY 184
Query: 175 LGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNN 234
L N++ ++ L L+ L L + P++ +N T+ T+
Sbjct: 185 LSKNHISD---------LRALAGLKNLDVLELFSQECLNK-PINHQSNLVVPNTVKNTDG 234
Query: 235 LLQGPTPRFNNSKLT 249
L P ++
Sbjct: 235 SLVTPEIISDDGDYE 249
|
| >2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} Length = 309 | Back alignment and structure |
|---|
Score = 61.1 bits (149), Expect = 3e-10
Identities = 41/203 (20%), Positives = 64/203 (31%), Gaps = 66/203 (32%)
Query: 423 ENRLGRGGVGTVYKGE-LKDGTEVGVKRMELGSVTEQG-IAQFESE------------IT 468
+GRGG+G VY+ E V +K M ++ + + E +
Sbjct: 39 RRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVP 98
Query: 469 VLTKG----------------TLGRHLFNWEEEGLEPLEWNTRLNI------ALDVA--- 503
+ G L L +G PL + I ALD A
Sbjct: 99 IHDFGEIDGQLYVDMRLINGVDLAAML---RRQG--PLAPPRAVAIVRQIGSALDAAHAA 153
Query: 504 ---------------RGDDMRVADFGLVRLVPENGKHSILTK---VAGTFGYLAPEYIVT 545
D + DFG+ + LT+ GT Y+APE
Sbjct: 154 GATHRDVKPENILVSADDFAYLVDFGIASATTDEK----LTQLGNTVGTLYYMAPERFSE 209
Query: 546 GRITAKVDVYSFGMILMDLITGR 568
T + D+Y+ +L + +TG
Sbjct: 210 SHATYRADIYALTCVLYECLTGS 232
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 597 | Back alignment and structure |
|---|
Score = 61.9 bits (150), Expect = 3e-10
Identities = 26/137 (18%), Positives = 45/137 (32%), Gaps = 23/137 (16%)
Query: 106 DQNRKGTVPP-ILKKLSSMAVMYLENNQLRGPIPSLVG--SLEFFSAYEANISGTIPD-- 160
N V + +L+ + L++N L L+ L + I
Sbjct: 219 SHNSINVVRGPVNVELTIL---KLQHNNLT-DTAWLLNYPGLVEVDLSYNELE-KIMYHP 273
Query: 161 FIGTDTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSF 220
F+ +L L + NN L + + TL+ L L HN L + +
Sbjct: 274 FVKM---QRLERLYISNNRLV-ALNLYG-------QPIPTLKVLDLSHNHLLHV-ERNQP 321
Query: 221 NNHPKLTTLNLTNNLLQ 237
+L L L +N +
Sbjct: 322 QF-DRLENLYLDHNSIV 337
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 597 | Back alignment and structure |
|---|
Score = 59.9 bits (145), Expect = 1e-09
Identities = 42/232 (18%), Positives = 69/232 (29%), Gaps = 24/232 (10%)
Query: 112 TVPPILKKLSSMAVMYLENNQLRG-PIPSLVG--SLEFFSAYEANISGTIPDFIGTDTFP 168
T L + + L N+L V LE + + + P
Sbjct: 245 TDTAWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLV-ALNLYGQP--IP 301
Query: 169 QLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTT 228
L LDL +N+L + + LE+L L HN + + + H L
Sbjct: 302 TLKVLDLSHNHLL-HVE-------RNQPQFDRLENLYLDHNSIVTL----KLSTHHTLKN 349
Query: 229 LNLTNNLLQG----PTPRFNNSKLTVDMRTGSNCFCLDDPGLACDSRVNILLS-IAESMG 283
L L++N R D + GL C L + + +
Sbjct: 350 LTLSHNDWDCNSLRALFRNVARPAVDDADQHCKIDYQLEHGLCCKESDKPYLDRLLQYIA 409
Query: 284 YPEVLAESRKGNDPCPTYKYWKGISCDIGGNITENVVVITDGNPDVEKESNS 335
V+ + ++ C + IT+ V GN +E E N
Sbjct: 410 LTSVVEKVQRAQGRCSATDTINSVQSLS-HYITQQGGVPLQGNEQLEAEVNE 460
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 597 | Back alignment and structure |
|---|
Score = 59.9 bits (145), Expect = 2e-09
Identities = 31/144 (21%), Positives = 61/144 (42%), Gaps = 21/144 (14%)
Query: 101 NIELQDQNRKGTVPPILKKLSSMAVMYLENNQLRGPIPSLV----GSLEFFSAYEANISG 156
++ + Q + L++ ++ +N+ +R +P+ + +E + + I
Sbjct: 31 DVHIDMQTQDVYFGFEDITLNNQKIVTFKNSTMRK-LPAALLDSFRQVELLNLNDLQIE- 88
Query: 157 TIPDFIGTDTF---PQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTG 213
I F + L +G N ++ +P N+ L L L N L+
Sbjct: 89 EIDT----YAFAYAHTIQKLYMGFNAIR-YLPPHV------FQNVPLLTVLVLERNDLSS 137
Query: 214 IFPVSSFNNHPKLTTLNLTNNLLQ 237
+ P F+N PKLTTL+++NN L+
Sbjct: 138 L-PRGIFHNTPKLTTLSMSNNNLE 160
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 597 | Back alignment and structure |
|---|
Score = 58.8 bits (142), Expect = 3e-09
Identities = 28/131 (21%), Positives = 51/131 (38%), Gaps = 16/131 (12%)
Query: 112 TVPP-ILKKLSSMAVMYLENNQLRGPIPSLV----GSLEFFSAYEANISGTIPDFIGTDT 166
+P +L + ++ L + Q+ I + +++ I +P + +
Sbjct: 65 KLPAALLDSFRQVELLNLNDLQIEE-IDTYAFAYAHTIQKLYMGFNAIR-YLPPHVFQN- 121
Query: 167 FPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKL 226
P L+ L L N+L ++P F N L LS+ +N L I +F L
Sbjct: 122 VPLLTVLVLERNDLS-SLPRGI---FH---NTPKLTTLSMSNNNLERI-EDDTFQATTSL 173
Query: 227 TTLNLTNNLLQ 237
L L++N L
Sbjct: 174 QNLQLSSNRLT 184
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 597 | Back alignment and structure |
|---|
Score = 57.6 bits (139), Expect = 6e-09
Identities = 25/150 (16%), Positives = 46/150 (30%), Gaps = 27/150 (18%)
Query: 106 DQNRKGTVPP-ILKKLSSMAVMYLENNQLRGPIPSLV----GSLEFFSAYEANISGTIPD 160
++N ++P I + + + NN L I SL+ ++ +
Sbjct: 131 ERNDLSSLPRGIFHNTPKLTTLSMSNNNLER-IEDDTFQATTSLQNLQLSSNRLT-HVDL 188
Query: 161 FIGTDTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSF 220
P L + ++ N L ++ +E+L HN + +
Sbjct: 189 ----SLIPSLFHANVSYNLLS------------TLAIPIAVEELDASHNSINVV-RGPVN 231
Query: 221 NNHPKLTTLNLTNNLLQGPTPRFNNSKLTV 250
LT L L +N L N L
Sbjct: 232 VE---LTILKLQHNNLTDTAWLLNYPGLVE 258
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 597 | Back alignment and structure |
|---|
Score = 51.1 bits (122), Expect = 7e-07
Identities = 10/87 (11%), Positives = 36/87 (41%), Gaps = 8/87 (9%)
Query: 153 NISGTIPDF--IGTDTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNK 210
N+ P++ I ++ + D+ + + F + L+ + ++ ++
Sbjct: 8 NVKPRQPEYKCIDSNLQYDCVFYDVHIDMQTQDVYFGF-----EDITLNNQKIVTFKNST 62
Query: 211 LTGIFPVSSFNNHPKLTTLNLTNNLLQ 237
+ + P + ++ ++ LNL + ++
Sbjct: 63 MRKL-PAALLDSFRQVELLNLNDLQIE 88
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} Length = 390 | Back alignment and structure |
|---|
Score = 61.2 bits (149), Expect = 3e-10
Identities = 26/138 (18%), Positives = 44/138 (31%), Gaps = 25/138 (18%)
Query: 106 DQNRKGTVPP-ILKKLSSMAVMYLENNQLRGPIPSLVG--SLEFFSAYEANISGTIPDFI 162
N V + +L+ + L++N L L+ L + I
Sbjct: 213 SHNSINVVRGPVNVELTIL---KLQHNNLT-DTAWLLNYPGLVEVDLSYNELE-KIMY-- 265
Query: 163 GTDTF---PQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSS 219
F +L L + NN L + + TL+ L L HN L + +
Sbjct: 266 --HPFVKMQRLERLYISNNRLV-ALNLYG-------QPIPTLKVLDLSHNHLLHV-ERNQ 314
Query: 220 FNNHPKLTTLNLTNNLLQ 237
+L L L +N +
Sbjct: 315 PQF-DRLENLYLDHNSIV 331
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} Length = 390 | Back alignment and structure |
|---|
Score = 60.4 bits (147), Expect = 6e-10
Identities = 28/131 (21%), Positives = 51/131 (38%), Gaps = 16/131 (12%)
Query: 112 TVPP-ILKKLSSMAVMYLENNQLRGPIPSLV----GSLEFFSAYEANISGTIPDFIGTDT 166
+P +L + ++ L + Q+ I + +++ I +P + +
Sbjct: 59 KLPAALLDSFRQVELLNLNDLQIEE-IDTYAFAYAHTIQKLYMGFNAIR-YLPPHVFQNV 116
Query: 167 FPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKL 226
P L+ L L N+L ++P F N L LS+ +N L I +F L
Sbjct: 117 -PLLTVLVLERNDLS-SLPRGI---FH---NTPKLTTLSMSNNNLERI-EDDTFQATTSL 167
Query: 227 TTLNLTNNLLQ 237
L L++N L
Sbjct: 168 QNLQLSSNRLT 178
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} Length = 390 | Back alignment and structure |
|---|
Score = 59.3 bits (144), Expect = 2e-09
Identities = 26/129 (20%), Positives = 42/129 (32%), Gaps = 18/129 (13%)
Query: 112 TVPPILKKLSSMAVMYLENNQLRG-PIPSLVG--SLEFFSAYEANISGTIPDFIGTDTFP 168
T L + + L N+L V LE + + + P
Sbjct: 239 TDTAWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLV-ALNLYGQP--IP 295
Query: 169 QLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTT 228
L LDL +N+L + + LE+L L HN + + + H L
Sbjct: 296 TLKVLDLSHNHLL-HVER-------NQPQFDRLENLYLDHNSIVTL----KLSTHHTLKN 343
Query: 229 LNLTNNLLQ 237
L L++N
Sbjct: 344 LTLSHNDWD 352
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} Length = 390 | Back alignment and structure |
|---|
Score = 57.4 bits (139), Expect = 7e-09
Identities = 25/150 (16%), Positives = 46/150 (30%), Gaps = 27/150 (18%)
Query: 106 DQNRKGTVPP-ILKKLSSMAVMYLENNQLRGPIPSLV----GSLEFFSAYEANISGTIPD 160
++N ++P I + + + NN L I SL+ ++ +
Sbjct: 125 ERNDLSSLPRGIFHNTPKLTTLSMSNNNLER-IEDDTFQATTSLQNLQLSSNRLT-HVDL 182
Query: 161 FIGTDTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSF 220
P L + ++ N L ++ +E+L HN + +
Sbjct: 183 ----SLIPSLFHANVSYNLLS------------TLAIPIAVEELDASHNSINVV-RGPVN 225
Query: 221 NNHPKLTTLNLTNNLLQGPTPRFNNSKLTV 250
LT L L +N L N L
Sbjct: 226 VE---LTILKLQHNNLTDTAWLLNYPGLVE 252
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} Length = 390 | Back alignment and structure |
|---|
Score = 55.1 bits (133), Expect = 4e-08
Identities = 31/136 (22%), Positives = 52/136 (38%), Gaps = 41/136 (30%)
Query: 106 DQNRKGTVPP-ILKKLSSMAVMYLENNQLRGPIPSLVGSLEFFSAYEANISGTIPDFIGT 164
N +PP + + + + V+ LE N L ++P
Sbjct: 101 GFNAIRYLPPHVFQNVPLLTVLVLERNDLS----------------------SLPR---- 134
Query: 165 DTF---PQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFN 221
F P+L+ L + NNNL+ I ++L++L L N+LT + +S
Sbjct: 135 GIFHNTPKLTTLSMSNNNLE-RIEDDTF------QATTSLQNLQLSSNRLTHV-DLSLI- 185
Query: 222 NHPKLTTLNLTNNLLQ 237
P L N++ NLL
Sbjct: 186 --PSLFHANVSYNLLS 199
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} Length = 390 | Back alignment and structure |
|---|
Score = 50.0 bits (120), Expect = 1e-06
Identities = 8/77 (10%), Positives = 31/77 (40%), Gaps = 6/77 (7%)
Query: 161 FIGTDTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSF 220
I ++ + D+ + + F + L+ + ++ ++ + + P +
Sbjct: 12 CIDSNLQYDCVFYDVHIDMQTQDVYFGF-----EDITLNNQKIVTFKNSTMRKL-PAALL 65
Query: 221 NNHPKLTTLNLTNNLLQ 237
++ ++ LNL + ++
Sbjct: 66 DSFRQVELLNLNDLQIE 82
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} Length = 390 | Back alignment and structure |
|---|
Score = 42.3 bits (100), Expect = 3e-04
Identities = 21/124 (16%), Positives = 41/124 (33%), Gaps = 34/124 (27%)
Query: 108 NRKGTVPPILKKLSSMAVMYLENNQLRGPIPSLVGSLEFFSAYEANISGTIPDFIGTDTF 167
NR + + + ++ V+ L +N L + F
Sbjct: 282 NRLVALNLYGQPIPTLKVLDLSHNHLL----------------------HVERNQPQ--F 317
Query: 168 PQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLT 227
+L L L +N++ T+ +S TL++L+L HN + F N +
Sbjct: 318 DRLENLYLDHNSIV-TLK---------LSTHHTLKNLTLSHNDWDCNSLRALFRNVARPA 367
Query: 228 TLNL 231
+
Sbjct: 368 VDDA 371
|
| >3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* Length = 311 | Back alignment and structure |
|---|
Score = 60.7 bits (148), Expect = 4e-10
Identities = 45/203 (22%), Positives = 70/203 (34%), Gaps = 64/203 (31%)
Query: 425 RLGRGGVGTVYKGE-LKDGTEVGVK--RMELG-------------------------SVT 456
LG GG+ V+ L+D +V VK R +L +V
Sbjct: 19 ILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVY 78
Query: 457 EQGIAQFESEITV-----LTKG-TLGRHLFNWEEEGLEPLEWNTRLNIALDVARG----- 505
+ G A+ + G TL + EG P+ + + D +
Sbjct: 79 DTGEAETPAGPLPYIVMEYVDGVTLRDIV---HTEG--PMTPKRAIEVIADACQALNFSH 133
Query: 506 -----------------DDMRV--ADFGLVRLVPENGKHSILT-KVAGTFGYLAPEYIVT 545
V DFG+ R + ++G T V GT YL+PE
Sbjct: 134 QNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARG 193
Query: 546 GRITAKVDVYSFGMILMDLITGR 568
+ A+ DVYS G +L +++TG
Sbjct: 194 DSVDARSDVYSLGCVLYEVLTGE 216
|
| >2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus} Length = 332 | Back alignment and structure |
|---|
Score = 60.8 bits (148), Expect = 4e-10
Identities = 25/142 (17%), Positives = 48/142 (33%), Gaps = 28/142 (19%)
Query: 108 NRKGTVPPILKKLSSMAVMYLENNQLRGPIPSLVGSLEFFSAYEA----NISGTIPDFIG 163
+ +P L ++ ++L++N+++ I Y + I
Sbjct: 182 AKLTGIPKDL--PETLNELHLDHNKIQA-IELED-----LLRYSKLYRLGLGHNQIRMIE 233
Query: 164 TDTF---PQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGI-----F 215
+ P L L L NN L +P+ +L L+ + L N +T +
Sbjct: 234 NGSLSFLPTLRELHLDNNKLS-RVPAGL-------PDLKLLQVVYLHTNNITKVGVNDFC 285
Query: 216 PVSSFNNHPKLTTLNLTNNLLQ 237
PV ++L NN +
Sbjct: 286 PVGFGVKRAYYNGISLFNNPVP 307
|
| >2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus} Length = 332 | Back alignment and structure |
|---|
Score = 57.3 bits (139), Expect = 5e-09
Identities = 35/182 (19%), Positives = 60/182 (32%), Gaps = 55/182 (30%)
Query: 86 CQWSHVICSDDG----------QVTNIELQDQNRKGTVPP-ILKKLSSMAVMYLENNQLR 134
C V CSD G T ++LQ+ N + K L + + L NN++
Sbjct: 33 CHLRVVQCSDLGLKAVPKEISPDTTLLDLQN-NDISELRKDDFKGLQHLYALVLVNNKIS 91
Query: 135 GPIPSLVGSLEFFSAYEANISGTIPDFIGTDTF---PQLSYLDLGNNNLQGTIPSSFGMP 191
I + F +L L + N+L IP +P
Sbjct: 92 ----------------------KIHE----KAFSPLRKLQKLYISKNHLV-EIPP--NLP 122
Query: 192 FADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNNLLQG---PTPRFNNSKL 248
S+L +L + N++ + P F+ + + + N L+ F+ KL
Sbjct: 123 -------SSLVELRIHDNRIRKV-PKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGLKL 174
Query: 249 TV 250
Sbjct: 175 NY 176
|
| >2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus} Length = 332 | Back alignment and structure |
|---|
Score = 56.6 bits (137), Expect = 9e-09
Identities = 23/135 (17%), Positives = 45/135 (33%), Gaps = 11/135 (8%)
Query: 106 DQNRKGTVPP-ILKKLSSMAVMYLENNQLRGPIPSLV----GSLEFFSAYEANISGTIPD 160
D N+ + L + S + + L +NQ+R I + +L +S +P
Sbjct: 201 DHNKIQAIELEDLLRYSKLYRLGLGHNQIRM-IENGSLSFLPTLRELHLDNNKLS-RVPA 258
Query: 161 FIGTDTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGI-FPVSS 219
G L + L NN+ + + P + +SL +N + ++
Sbjct: 259 --GLPDLKLLQVVYLHTNNIT-KVGVNDFCPVGFGVKRAYYNGISLFNNPVPYWEVQPAT 315
Query: 220 FNNHPKLTTLNLTNN 234
F + N
Sbjct: 316 FRCVTDRLAIQFGNY 330
|
| >2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus} Length = 332 | Back alignment and structure |
|---|
Score = 55.8 bits (135), Expect = 2e-08
Identities = 32/146 (21%), Positives = 56/146 (38%), Gaps = 24/146 (16%)
Query: 98 QVTNIELQDQNRKGTVPP-ILKKLSSMAVMYLENNQLRGPIPSLVGSLEFFSAYEANISG 156
+ + L + N+ + L + +Y+ N L P+L SL ++ I
Sbjct: 79 HLYALVLVN-NKISKIHEKAFSPLRKLQKLYISKNHLVEIPPNLPSSLVELRIHDNRIR- 136
Query: 157 TIPDFIGTDTF---PQLSYLDLGNNNLQGTI--PSSFGMPFADISNLSTLEDLSLGHNKL 211
+P F ++ +++G N L+ + P +F L L L + KL
Sbjct: 137 KVPK----GVFSGLRNMNCIEMGGNPLENSGFEPGAF-------DGLK-LNYLRISEAKL 184
Query: 212 TGIFPVSSFNNHPKLTTLNLTNNLLQ 237
TGI P L L+L +N +Q
Sbjct: 185 TGI-PKDLP---ETLNELHLDHNKIQ 206
|
| >2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus} Length = 332 | Back alignment and structure |
|---|
Score = 44.6 bits (106), Expect = 6e-05
Identities = 17/107 (15%), Positives = 31/107 (28%), Gaps = 26/107 (24%)
Query: 106 DQNRKGTVPPILKKLSSMAVMYLENNQLRGPIPSLVGSLEFFSAYEANISGTIPDFIGTD 165
D N+ VP L L + V+YL N + +
Sbjct: 249 DNNKLSRVPAGLPDLKLLQVVYLHTNNITK-VG----------------VNDFCPVGFGV 291
Query: 166 TFPQLSYLDLGNNNLQGTI--PSSFGMPFADISNLSTLEDLSLGHNK 210
+ + L NN + P++F ++ + G+ K
Sbjct: 292 KRAYYNGISLFNNPVPYWEVQPATF-------RCVTDRLAIQFGNYK 331
|
| >2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus} Length = 361 | Back alignment and structure |
|---|
Score = 61.0 bits (148), Expect = 4e-10
Identities = 33/168 (19%), Positives = 58/168 (34%), Gaps = 52/168 (30%)
Query: 86 CQWSHVICSDDG----------QVTNIELQDQNRKGTVPP--ILKKLSSMAVMYLENNQL 133
C + + CS ++L N + +L+++ + L +N L
Sbjct: 18 CASNILSCSKQQLPNVPQSLPSYTALLDLSH-NNLSRLRAEWTPTRLTNLHSLLLSHNHL 76
Query: 134 RGPIPSLVGSLEFFSAYEANISGTIPDFIGTDTF---PQLSYLDLGNNNLQGTIPS-SFG 189
I + F P L YLDL +N+L T+ F
Sbjct: 77 N----------------------FISS----EAFVPVPNLRYLDLSSNHLH-TLDEFLF- 108
Query: 190 MPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNNLLQ 237
S+L LE L L +N + + ++F + +L L L+ N +
Sbjct: 109 ------SDLQALEVLLLYNNHIVVV-DRNAFEDMAQLQKLYLSQNQIS 149
|
| >2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus} Length = 361 | Back alignment and structure |
|---|
Score = 59.9 bits (145), Expect = 8e-10
Identities = 29/139 (20%), Positives = 46/139 (33%), Gaps = 21/139 (15%)
Query: 106 DQNRKGTVPP-ILKKLSSMAVMYLENNQLRGPIPSLV----GSLEFFSAYEANISGTIPD 160
N + + ++ + L +N L + + +LE Y +I +
Sbjct: 72 SHNHLNFISSEAFVPVPNLRYLDLSSNHLHT-LDEFLFSDLQALEVLLLYNNHIV-VVDR 129
Query: 161 FIGTDTF---PQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPV 217
+ F QL L L N + P D + L L L L NKL + P+
Sbjct: 130 ----NAFEDMAQLQKLYLSQNQIS-RFPVEL---IKDGNKLPKLMLLDLSSNKLKKL-PL 180
Query: 218 SSFNNHPKLT--TLNLTNN 234
+ P L L NN
Sbjct: 181 TDLQKLPAWVKNGLYLHNN 199
|
| >1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A* Length = 567 | Back alignment and structure |
|---|
Score = 61.3 bits (148), Expect = 4e-10
Identities = 32/166 (19%), Positives = 54/166 (32%), Gaps = 34/166 (20%)
Query: 73 VIPKRL-KWSDPDPCQWSHVICSDDGQVTNIELQDQNRKGTVPPILKKLSSMAVMYLENN 131
V P R D L ++ TV L++L + + L +N
Sbjct: 414 VDPMRAAYLDDLRSKFLLENSVLKMEYADVRVLHLAHKDLTVLCHLEQLLLVTHLDLSHN 473
Query: 132 QLRGPIPSLVGSLEFFSAYEANISGTIPDFIGTDTFPQLSYLDLGNNNLQGTIPSSFGMP 191
+LR +P + L L +N L+ +
Sbjct: 474 RLR----------------------ALPPALAA--LRCLEVLQASDNALE-NVD------ 502
Query: 192 FADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNNLLQ 237
++NL L++L L +N+L + + P+L LNL N L
Sbjct: 503 --GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLC 546
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} Length = 562 | Back alignment and structure |
|---|
Score = 61.4 bits (149), Expect = 5e-10
Identities = 24/136 (17%), Positives = 53/136 (38%), Gaps = 20/136 (14%)
Query: 106 DQNRKGTVPPILKKLSSMAVMYLENNQL----RGPIPSLVG---SLEFFSAYEANISGTI 158
+N + +M+ + + L S+ + ++G++
Sbjct: 385 QRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSV 444
Query: 159 PDFIGTDTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVS 218
+ P++ LDL NN + +IP D+++L L++L++ N+L + P
Sbjct: 445 FRCLP----PKVKVLDLHNNRIM-SIP-------KDVTHLQALQELNVASNQLKSV-PDG 491
Query: 219 SFNNHPKLTTLNLTNN 234
F+ L + L +N
Sbjct: 492 VFDRLTSLQYIWLHDN 507
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} Length = 562 | Back alignment and structure |
|---|
Score = 53.0 bits (127), Expect = 2e-07
Identities = 27/125 (21%), Positives = 44/125 (35%), Gaps = 10/125 (8%)
Query: 116 ILKKLSSMAVMYLENNQLRG---PIPSLVGSLEFFSAYEANISGTIPDFIGTDTFPQLSY 172
+ + M + L + P S F + + N+ F G T +L
Sbjct: 324 LYSVFAEMNIKMLSISDTPFIHMVCPPSPSSFTFLNFTQ-NVFTDSV-FQGCSTLKRLQT 381
Query: 173 LDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLT 232
L L N L+ M N+S+LE L + N L + + LNL+
Sbjct: 382 LILQRNGLK-NFFKVALMT----KNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLS 436
Query: 233 NNLLQ 237
+N+L
Sbjct: 437 SNMLT 441
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} Length = 562 | Back alignment and structure |
|---|
Score = 52.6 bits (126), Expect = 3e-07
Identities = 21/80 (26%), Positives = 34/80 (42%), Gaps = 12/80 (15%)
Query: 158 IPDFIGTDTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPV 217
+P + T L L N++ + DIS LS L L L HN++ +
Sbjct: 46 VPKDLPPRT----KALSLSQNSIS-ELRMP------DISFLSELRVLRLSHNRIRSL-DF 93
Query: 218 SSFNNHPKLTTLNLTNNLLQ 237
F + L L++++N LQ
Sbjct: 94 HVFLFNQDLEYLDVSHNRLQ 113
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} Length = 562 | Back alignment and structure |
|---|
Score = 52.6 bits (126), Expect = 3e-07
Identities = 28/132 (21%), Positives = 44/132 (33%), Gaps = 34/132 (25%)
Query: 119 KLSSMAVMYLENNQLRGPIPSLVGSLEFFSAYEANISGTIPDFIGTDTFPQLSYLDLGNN 178
LS + V+ L +N++R + V F L YLD+ +N
Sbjct: 74 FLSELRVLRLSHNRIRS-LDFHV-------------------F---LFNQDLEYLDVSHN 110
Query: 179 NLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNNLLQ- 237
LQ I +++L L L N + F N KLT L L+ +
Sbjct: 111 RLQ-NISCC---------PMASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQ 160
Query: 238 GPTPRFNNSKLT 249
+ L+
Sbjct: 161 LDLLPVAHLHLS 172
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} Length = 562 | Back alignment and structure |
|---|
Score = 47.9 bits (114), Expect = 8e-06
Identities = 33/184 (17%), Positives = 63/184 (34%), Gaps = 24/184 (13%)
Query: 90 HVICSDD-GQVTNIELQDQNRKGTVPPILKKLSSMAVMYLENNQLR-----GPIPSLVGS 143
H++C T + +V L + + L+ N L+ + + S
Sbjct: 345 HMVCPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSS 404
Query: 144 LEFFSAYEANISGTIPDFIGTDTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLED 203
LE +++ D + L+L +N L G++ ++
Sbjct: 405 LETLDVSLNSLNSHAYDRT-CAWAESILVLNLSSNMLTGSVFRCL---------PPKVKV 454
Query: 204 LSLGHNKLTGIFPVSSFNNHPKLTTLNLTNNLLQG-PTPRFNN-SKLTVDMRTGSN---C 258
L L +N++ I P + L LN+ +N L+ P F+ + L + N C
Sbjct: 455 LDLHNNRIMSI-P-KDVTHLQALQELNVASNQLKSVPDGVFDRLTSLQ-YIWLHDNPWDC 511
Query: 259 FCLD 262
C
Sbjct: 512 TCPG 515
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 60.1 bits (146), Expect = 6e-10
Identities = 24/151 (15%), Positives = 48/151 (31%), Gaps = 21/151 (13%)
Query: 97 GQVTNIELQDQNRKGTVPP-ILKKLSSMAVMYLENNQLR----GPIPSLVGSLEFFSAYE 151
G + +++L N + K LSS+ + L N + + S + L+
Sbjct: 100 GSLEHLDLSY-NYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGN 158
Query: 152 ANISGTIPDFIGTDTF---PQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGH 208
+ I F L L++ ++LQ P S ++ + L L
Sbjct: 159 MDTFTKIQR----KDFAGLTFLEELEIDASDLQSYEPKSL-------KSIQNVSHLILHM 207
Query: 209 NKLTGIFPVSSFNNHPKLTTLNLTNNLLQGP 239
+ + + + L L + L
Sbjct: 208 KQHILL-LEIFVDVTSSVECLELRDTDLDTF 237
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 59.7 bits (145), Expect = 8e-10
Identities = 26/137 (18%), Positives = 44/137 (32%), Gaps = 14/137 (10%)
Query: 106 DQNRKGTVPP-ILKKLSSMAVMYLENNQLRGPIPSLV----GSLEFFSAYEANISGTIPD 160
N T+ L S+ + L N L + S SL F + T+ +
Sbjct: 84 TSNGINTIEEDSFSSLGSLEHLDLSYNYLSN-LSSSWFKPLSSLTFLNLLGNPYK-TLGE 141
Query: 161 FIGTDTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSF 220
+L L +GN + I D + L+ LE+L + + L S
Sbjct: 142 TSLFSHLTKLQILRVGNMDTFTKIQR------KDFAGLTFLEELEIDASDLQSY-EPKSL 194
Query: 221 NNHPKLTTLNLTNNLLQ 237
+ ++ L L
Sbjct: 195 KSIQNVSHLILHMKQHI 211
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 59.0 bits (143), Expect = 1e-09
Identities = 29/96 (30%), Positives = 41/96 (42%), Gaps = 12/96 (12%)
Query: 165 DTFPQLSYLDLGNNNLQGTIPS-SFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNH 223
L L L +N + TI SF S+L +LE L L +N L+ + S F
Sbjct: 73 QRCVNLQALVLTSNGIN-TIEEDSF-------SSLGSLEHLDLSYNYLSNL-SSSWFKPL 123
Query: 224 PKLTTLNLTNNLLQ--GPTPRFNNSKLTVDMRTGSN 257
LT LNL N + G T F++ +R G+
Sbjct: 124 SSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNM 159
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 57.4 bits (139), Expect = 5e-09
Identities = 20/81 (24%), Positives = 29/81 (35%), Gaps = 12/81 (14%)
Query: 157 TIPDFIGTDTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFP 216
+IP + LDL NN + S L+ L L N + I
Sbjct: 45 SIPSGLTEAV----KSLDLSNNRITYISNSDL-------QRCVNLQALVLTSNGINTI-E 92
Query: 217 VSSFNNHPKLTTLNLTNNLLQ 237
SF++ L L+L+ N L
Sbjct: 93 EDSFSSLGSLEHLDLSYNYLS 113
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 57.1 bits (138), Expect = 7e-09
Identities = 14/145 (9%), Positives = 43/145 (29%), Gaps = 11/145 (7%)
Query: 100 TNIELQDQNRKGTVPP-ILKKLSSMAVMYLENNQLRGPIPSLV----GSLEFFSAYEANI 154
+ + + + + L+ + + ++ + L+ ++ +
Sbjct: 152 QILRVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQS-YEPKSLKSIQNVSHLILHMKQH 210
Query: 155 SGTIPDFIGTDTFPQLSYLDLGNNNLQGTIPSSF-GMPFADISNLSTLEDLSLGHNKLTG 213
+ + D + L+L + +L S + T ++ + L
Sbjct: 211 I-LLLEIF-VDVTSSVECLELRDTDLDTFHFSELSTGETNSLIKKFTFRNVKITDESLFQ 268
Query: 214 IFPVSSFNNHPKLTTLNLTNNLLQG 238
+ + N L L + N L+
Sbjct: 269 VMKL--LNQISGLLELEFSRNQLKS 291
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 55.5 bits (134), Expect = 2e-08
Identities = 20/143 (13%), Positives = 44/143 (30%), Gaps = 21/143 (14%)
Query: 106 DQNRKGTVPP-ILKKLSSMAVMYLENNQLRGPIPSLV-------GSLEFFSAYEANISGT 157
D + + P LK + +++ + L Q + + LE +
Sbjct: 182 DASDLQSYEPKSLKSIQNVSHLILHMKQHIL-LLEIFVDVTSSVECLELRDTDLDTFHFS 240
Query: 158 IPDFIGTDTFPQLSYL---DLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGI 214
T++ + + + +L + + +S L +L N+L +
Sbjct: 241 ELSTGETNSLIKKFTFRNVKITDESLF-QVMKLL-------NQISGLLELEFSRNQLKSV 292
Query: 215 FPVSSFNNHPKLTTLNLTNNLLQ 237
P F+ L + L N
Sbjct: 293 -PDGIFDRLTSLQKIWLHTNPWD 314
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 53.2 bits (128), Expect = 1e-07
Identities = 32/141 (22%), Positives = 54/141 (38%), Gaps = 40/141 (28%)
Query: 99 VTNIELQDQNRKGTVPP-ILKKLSSMAVMYLENNQLRGPIPSLVGSLEFFSAYEANISGT 157
V +++L + NR + L++ ++ + L +N + T
Sbjct: 54 VKSLDLSN-NRITYISNSDLQRCVNLQALVLTSNGIN----------------------T 90
Query: 158 IPDFIGTDTF---PQLSYLDLGNNNLQGTIPSS-FGMPFADISNLSTLEDLSLGHNKLTG 213
I + D+F L +LDL N L + SS F LS+L L+L N
Sbjct: 91 IEE----DSFSSLGSLEHLDLSYNYLS-NLSSSWF-------KPLSSLTFLNLLGNPYKT 138
Query: 214 IFPVSSFNNHPKLTTLNLTNN 234
+ S F++ KL L + N
Sbjct: 139 LGETSLFSHLTKLQILRVGNM 159
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 47.8 bits (114), Expect = 6e-06
Identities = 22/155 (14%), Positives = 43/155 (27%), Gaps = 26/155 (16%)
Query: 106 DQNRKGTVPP--ILKKLSSMAVMYLENNQLRGPIPSLV----GSLEFFSAYEANISGTIP 159
N T+ + L+ + ++ + N I LE +++ +
Sbjct: 132 LGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQ-SYE 190
Query: 160 D--FIGTDTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGI--- 214
+ +S+L L + F + S++E L L L
Sbjct: 191 PKSL---KSIQNVSHLILHMKQHI-LLLEIF------VDVTSSVECLELRDTDLDTFHFS 240
Query: 215 -FPVSSFNNHPKLTTL---NLTNNLLQGPTPRFNN 245
N+ K T +T+ L N
Sbjct: 241 ELSTGETNSLIKKFTFRNVKITDESLFQVMKLLNQ 275
|
| >2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A Length = 220 | Back alignment and structure |
|---|
Score = 58.5 bits (142), Expect = 7e-10
Identities = 38/166 (22%), Positives = 57/166 (34%), Gaps = 31/166 (18%)
Query: 86 CQWSHVICSDDG----------QVTNIELQDQNRKGTVPP-ILKKLSSMAVMYLENNQLR 134
C + V C G +T I L+ N +PP + + L NNQ+
Sbjct: 11 CSNNIVDCRGKGLTEIPTNLPETITEIRLEQ-NTIKVIPPGAFSPYKKLRRIDLSNNQIS 69
Query: 135 GPIPSLV----GSLEFFSAYEANISGTIPD--FIGTDTFPQLSYLDLGNNNLQGTIPSSF 188
+ SL Y I+ +P F + L L L N + +F
Sbjct: 70 E-LAPDAFQGLRSLNSLVLYGNKIT-ELPKSLF---EGLFSLQLLLLNANKINCLRVDAF 124
Query: 189 GMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNN 234
+L L LSL NKL I +F+ + T++L N
Sbjct: 125 -------QDLHNLNLLSLYDNKLQTI-AKGTFSPLRAIQTMHLAQN 162
|
| >2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A Length = 220 | Back alignment and structure |
|---|
Score = 48.9 bits (117), Expect = 1e-06
Identities = 15/81 (18%), Positives = 30/81 (37%), Gaps = 12/81 (14%)
Query: 157 TIPDFIGTDTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFP 216
IP + + + L N ++ P +F S L + L +N+++ +
Sbjct: 25 EIPTNLPETI----TEIRLEQNTIKVIPPGAF-------SPYKKLRRIDLSNNQISEL-A 72
Query: 217 VSSFNNHPKLTTLNLTNNLLQ 237
+F L +L L N +
Sbjct: 73 PDAFQGLRSLNSLVLYGNKIT 93
|
| >3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311 | Back alignment and structure |
|---|
Score = 58.5 bits (142), Expect = 2e-09
Identities = 41/202 (20%), Positives = 64/202 (31%), Gaps = 57/202 (28%)
Query: 419 NFSEENRLGRGGVGTVYKG-ELKDGTEVGVKRMELGSVTEQGIAQFESEITVLTKGTLGR 477
+F +RLG G G V+K +DG VKR + A+ +E+ K +G+
Sbjct: 58 SFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEK--VGQ 115
Query: 478 H------LFNWEEEG-----LE---------------PLEWNTRLNIALDVARG------ 505
H WEE G E L D
Sbjct: 116 HPCCVRLEQAWEEGGILYLQTELCGPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHS 175
Query: 506 ----------------DDMRV--ADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGR 547
R DFGL+ + G + G Y+APE ++ G
Sbjct: 176 QGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGEV---QEGDPRYMAPE-LLQGS 231
Query: 548 ITAKVDVYSFGMILMDLITGRK 569
DV+S G+ ++++ +
Sbjct: 232 YGTAADVFSLGLTILEVACNME 253
|
| >2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7 Length = 347 | Back alignment and structure |
|---|
Score = 58.6 bits (141), Expect = 2e-09
Identities = 24/155 (15%), Positives = 43/155 (27%), Gaps = 16/155 (10%)
Query: 168 PQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLT 227
L+ L + N + D+ L L +L++ + L + +F+ P+L+
Sbjct: 31 ENLTELYIENQQHLQHLELR------DLRGLGELRNLTIVKSGLRFV-APDAFHFTPRLS 83
Query: 228 TLNLTNNLLQG-PTPRFNNSKLTVDMRTGSNCFCLDDPGLACDSRVNILLSIAESMGYPE 286
LNL+ N L+ L L L C + L E
Sbjct: 84 RLNLSFNALESLSWKTVQGLSLQE--------LVLSGNPLHCSCALRWLQRWEEEGLGGV 135
Query: 287 VLAESRKGNDPCPTYKYWKGISCDIGGNITENVVV 321
+ + + N V
Sbjct: 136 PEQKLQCHGQGPLAHMPNASCGVPTLKVQVPNASV 170
|
| >3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377 | Back alignment and structure |
|---|
Score = 58.4 bits (142), Expect = 3e-09
Identities = 44/199 (22%), Positives = 63/199 (31%), Gaps = 71/199 (35%)
Query: 423 ENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK--------- 472
++GRG G V+ G L+ D T V VK A+F E +L +
Sbjct: 119 GEQIGRGNFGEVFSGRLRADNTLVAVKSCRETL-PPDLKAKFLQEARILKQYSHPNIVRL 177
Query: 473 -------------------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARGDDMR---- 509
G L EG L T L + D A G M
Sbjct: 178 IGVCTQKQPIYIVMELVQGGDFLTFL---RTEG-ARLRVKTLLQMVGDAAAG--MEYLES 231
Query: 510 ----------------------VADFGLVRLVPENGKHSILTKVAGTFGY----LAPEYI 543
++DFG+ R + + G APE +
Sbjct: 232 KCCIHRDLAARNCLVTEKNVLKISDFGMSREEADG----VYAASGGLRQVPVKWTAPEAL 287
Query: 544 VTGRITAKVDVYSFGMILM 562
GR +++ DV+SFG IL+
Sbjct: 288 NYGRYSSESDVWSFG-ILL 305
|
| >1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452 | Back alignment and structure |
|---|
Score = 58.6 bits (142), Expect = 3e-09
Identities = 49/198 (24%), Positives = 75/198 (37%), Gaps = 64/198 (32%)
Query: 423 ENRLGRGGVGTVYKGELKDGTEVGVKRMELGSVTEQGIAQFESEITVLTK---------- 472
E +LG+G G V+ G T V +K ++ G+++ + F E V+ K
Sbjct: 189 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE---AFLQEAQVMKKLRHEKLVQLY 245
Query: 473 -----------------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARGDDMR------ 509
G+L L + E + L +++A +A G M
Sbjct: 246 AVVSEEPIYIVTEYMSKGSLLDFL---KGETGKYLRLPQLVDMAAQIASG--MAYVERMN 300
Query: 510 --------------------VADFGLVRLVPENG-KHSILTKVAGTFGYLAPEYIVTGRI 548
VADFGL RL+ +N K + APE + GR
Sbjct: 301 YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP--IKWTAPEAALYGRF 358
Query: 549 TAKVDVYSFGMILMDLIT 566
T K DV+SFG++L +L T
Sbjct: 359 TIKSDVWSFGILLTELTT 376
|
| >2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri} Length = 270 | Back alignment and structure |
|---|
Score = 57.3 bits (139), Expect = 3e-09
Identities = 42/173 (24%), Positives = 77/173 (44%), Gaps = 43/173 (24%)
Query: 98 QVTNIELQDQNRKGTVPP-ILKKLSSMAVMYLENNQLRGPIPSLVGSLEFFSAYEANISG 156
+ + + D N+ +P + +L ++A + L+ NQL+
Sbjct: 86 NLETLWVTD-NKLQALPIGVFDQLVNLAELRLDRNQLK---------------------- 122
Query: 157 TIPD--FIGTDTFPQLSYLDLGNNNLQGTIPS-SFGMPFADISNLSTLEDLSLGHNKLTG 213
++P F D+ +L+YL LG N LQ ++P F L++L++L L +N+L
Sbjct: 123 SLPPRVF---DSLTKLTYLSLGYNELQ-SLPKGVF-------DKLTSLKELRLYNNQLKR 171
Query: 214 IFPVSSFNNHPKLTTLNLTNNLLQG-PTPRFNNSKLTVDMRTGSN---CFCLD 262
+ P +F+ +L TL L NN L+ P F++ + ++ N C C
Sbjct: 172 V-PEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWDCTCNG 223
|
| >2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri} Length = 270 | Back alignment and structure |
|---|
Score = 55.0 bits (133), Expect = 2e-08
Identities = 33/124 (26%), Positives = 60/124 (48%), Gaps = 17/124 (13%)
Query: 119 KLSSMAVMYLENNQLRGPIPSLV----GSLEFFSAYEANISGTIPDFIGTDTFPQLSYLD 174
+L+ + ++YL +N+L+ +P+ + +LE + + +P + D L+ L
Sbjct: 59 RLTKLRLLYLNDNKLQT-LPAGIFKELKNLETLWVTDNKLQ-ALPIGV-FDQLVNLAELR 115
Query: 175 LGNNNLQGTIPSS-FGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTN 233
L N L+ ++P F +L+ L LSLG+N+L + P F+ L L L N
Sbjct: 116 LDRNQLK-SLPPRVF-------DSLTKLTYLSLGYNELQSL-PKGVFDKLTSLKELRLYN 166
Query: 234 NLLQ 237
N L+
Sbjct: 167 NQLK 170
|
| >2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri} Length = 270 | Back alignment and structure |
|---|
Score = 53.1 bits (128), Expect = 7e-08
Identities = 27/81 (33%), Positives = 33/81 (40%), Gaps = 12/81 (14%)
Query: 157 TIPDFIGTDTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFP 216
IP I DT LDL +N L +F L+ L L L NKL + P
Sbjct: 30 AIPSNIPADT----KKLDLQSNKLSSLPSKAF-------HRLTKLRLLYLNDNKLQTL-P 77
Query: 217 VSSFNNHPKLTTLNLTNNLLQ 237
F L TL +T+N LQ
Sbjct: 78 AGIFKELKNLETLWVTDNKLQ 98
|
| >2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535 | Back alignment and structure |
|---|
Score = 58.0 bits (140), Expect = 5e-09
Identities = 49/198 (24%), Positives = 75/198 (37%), Gaps = 64/198 (32%)
Query: 423 ENRLGRGGVGTVYKGELKDGTEVGVKRMELGSVTEQGIAQFESEITVLTK---------- 472
E +LG+G G V+ G T V +K ++ G+++ + F E V+ K
Sbjct: 272 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE---AFLQEAQVMKKLRHEKLVQLY 328
Query: 473 -----------------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARGDDMR------ 509
G+L L + E + L +++A +A G M
Sbjct: 329 AVVSEEPIYIVTEYMSKGSLLDFL---KGETGKYLRLPQLVDMAAQIASG--MAYVERMN 383
Query: 510 --------------------VADFGLVRLVPENG-KHSILTKVAGTFGYLAPEYIVTGRI 548
VADFGL RL+ +N K + APE + GR
Sbjct: 384 YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP--IKWTAPEAALYGRF 441
Query: 549 TAKVDVYSFGMILMDLIT 566
T K DV+SFG++L +L T
Sbjct: 442 TIKSDVWSFGILLTELTT 459
|
| >1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279 | Back alignment and structure |
|---|
Score = 56.5 bits (137), Expect = 6e-09
Identities = 50/200 (25%), Positives = 74/200 (37%), Gaps = 68/200 (34%)
Query: 423 ENRLGRGGVGTVYKGELKDGTEVGVKRMELGSVTEQGIAQFESEITVLTK---------- 472
RLG G G V+ G T+V VK ++ GS++ F +E ++ +
Sbjct: 18 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD---AFLAEANLMKQLQHQRLVRLY 74
Query: 473 -----------------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARGDDMR------ 509
G+L L G L N L++A +A G M
Sbjct: 75 AVVTQEPIYIITEYMENGSLVDFL--KTPSG-IKLTINKLLDMAAQIAEG--MAFIEERN 129
Query: 510 --------------------VADFGLVRLVPENGKHSILTKVAGT---FGYLAPEYIVTG 546
+ADFGL RL+ +N T G + APE I G
Sbjct: 130 YIHRDLRAANILVSDTLSCKIADFGLARLIEDN----EYTAREGAKFPIKWTAPEAINYG 185
Query: 547 RITAKVDVYSFGMILMDLIT 566
T K DV+SFG++L +++T
Sbjct: 186 TFTIKSDVWSFGILLTEIVT 205
|
| >3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323 | Back alignment and structure |
|---|
Score = 57.0 bits (138), Expect = 6e-09
Identities = 40/212 (18%), Positives = 67/212 (31%), Gaps = 73/212 (34%)
Query: 423 ENRLGRGGVGTVYKGELKDG----TEVGVKRMELGSVTEQGIAQFESEITVLTK------ 472
LG+G G+V + +LK +V VK ++ + I +F E + +
Sbjct: 28 GRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHV 87
Query: 473 ----------------------------GTLGRHL-FNWEEEGLEPLEWNTRLNIALDVA 503
G L L + E L T + +D+A
Sbjct: 88 AKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIA 147
Query: 504 RG----------------------DD--MRVADFGLVRLVPENGKHSILTKVAGTFGYL- 538
G +D + VADFGL R + + G L
Sbjct: 148 CGMEYLSSRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYR-----QGCASKLP 202
Query: 539 ----APEYIVTGRITAKVDVYSFGMILMDLIT 566
A E + T DV++FG+ + +++T
Sbjct: 203 VKWLALESLADNLYTVHSDVWAFGVTMWEIMT 234
|
| >2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A Length = 149 | Back alignment and structure |
|---|
Score = 53.5 bits (129), Expect = 9e-09
Identities = 23/78 (29%), Positives = 33/78 (42%), Gaps = 16/78 (20%)
Query: 163 GTDTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLST---LEDLSLGHNKLTGIFPVSS 219
TD F +L +L N L I+NL L+ L L N+++G V
Sbjct: 37 LTDEFEELEFLSTINVGLT------------SIANLPKLNKLKKLELSDNRVSGGLEVL- 83
Query: 220 FNNHPKLTTLNLTNNLLQ 237
P LT LNL+ N ++
Sbjct: 84 AEKCPNLTHLNLSGNKIK 101
|
| >2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A Length = 149 | Back alignment and structure |
|---|
Score = 49.7 bits (119), Expect = 2e-07
Identities = 27/135 (20%), Positives = 48/135 (35%), Gaps = 20/135 (14%)
Query: 102 IELQDQNRKGTVPPILKKLSSMAVMYLENNQLRGPIPSLVGSLEFFSAYEA-NISGT-IP 159
I L+ +NR P +K+L L+N++ L G + F E + +
Sbjct: 7 IHLELRNRT---PSDVKEL------VLDNSRS--NEGKLEGLTDEFEELEFLSTINVGLT 55
Query: 160 DFIGTDTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSS 219
+L L+L +N + G + L L+L NK+ + +
Sbjct: 56 SIANLPKLNKLKKLELSDNRVSGGLEVLA-------EKCPNLTHLNLSGNKIKDLSTIEP 108
Query: 220 FNNHPKLTTLNLTNN 234
L +L+L N
Sbjct: 109 LKKLENLKSLDLFNC 123
|
| >1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454 | Back alignment and structure |
|---|
Score = 57.0 bits (138), Expect = 1e-08
Identities = 46/197 (23%), Positives = 73/197 (37%), Gaps = 62/197 (31%)
Query: 423 ENRLGRGGVGTVYKGELKDGTEVGVKRMELGSVTEQGIAQFESEITVLTK---------- 472
E +LG G G V+ T+V VK M+ GS++ + F +E V+
Sbjct: 193 EKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVE---AFLAEANVMKTLQHDKLVKLH 249
Query: 473 -----------------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG---------- 505
G+L L +EG ++ + +A G
Sbjct: 250 AVVTKEPIYIITEFMAKGSLLDFL--KSDEG-SKQPLPKLIDFSAQIAEGMAFIEQRNYI 306
Query: 506 --------------DDMRVADFGLVRLVPENGKHSILTKVAGTFGY--LAPEYIVTGRIT 549
++ADFGL R++ +N + F APE I G T
Sbjct: 307 HRDLRAANILVSASLVCKIADFGLARVIEDN---EYTAREGAKFPIKWTAPEAINFGSFT 363
Query: 550 AKVDVYSFGMILMDLIT 566
K DV+SFG++LM+++T
Sbjct: 364 IKSDVWSFGILLMEIVT 380
|
| >1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes} Length = 263 | Back alignment and structure |
|---|
Score = 55.8 bits (135), Expect = 1e-08
Identities = 31/136 (22%), Positives = 51/136 (37%), Gaps = 20/136 (14%)
Query: 117 LKKLSSMAVMYLENNQLR--GPIPSLVGSLEFFSAYEANISGTIPDFIGTDTFPQLSYLD 174
++ +++ ++L +NQ+ P+ L LE S + + LS L
Sbjct: 59 MQFFTNLKELHLSHNQISDLSPLKDLT-KLEELSVNRNRLKN-----LNGIPSACLSRLF 112
Query: 175 LGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNN 234
L NN L+ T + +L LE LS+ +NKL I KL L+L N
Sbjct: 113 LDNNELRDTDS---------LIHLKNLEILSIRNNKLKSI---VMLGFLSKLEVLDLHGN 160
Query: 235 LLQGPTPRFNNSKLTV 250
+ K+
Sbjct: 161 EITNTGGLTRLKKVNW 176
|
| >1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes} Length = 263 | Back alignment and structure |
|---|
Score = 55.0 bits (133), Expect = 2e-08
Identities = 27/120 (22%), Positives = 43/120 (35%), Gaps = 20/120 (16%)
Query: 117 LKKLSSMAVMYLENNQLRG--PIPSLVGSLEFFSAYEANISGTIPDFIGTDTFPQLSYLD 174
LK L+ + + + N+L+ IPS L + D L L
Sbjct: 81 LKDLTKLEELSVNRNRLKNLNGIPSA--CLSRLFLDNNELR----DTDSLIHLKNLEILS 134
Query: 175 LGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNN 234
+ NN L+ +I + LS LE L L N++T K+ ++LT
Sbjct: 135 IRNNKLK-SIVM--------LGFLSKLEVLDLHGNEITNT---GGLTRLKKVNWIDLTGQ 182
|
| >1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes} Length = 263 | Back alignment and structure |
|---|
Score = 51.2 bits (123), Expect = 3e-07
Identities = 18/112 (16%), Positives = 44/112 (39%), Gaps = 19/112 (16%)
Query: 128 LENNQLR--GPIPSLVGSLEFFSAYEANISGTIPDFIGTDTFPQLSYLDLGNNNLQGTIP 185
+ P P L + + + +++ D + + + N+N+Q ++
Sbjct: 4 QRPTPINQVFPDPGLA-NAVKQNLGKQSVT----DLVSQKELSGVQNFNGDNSNIQ-SLA 57
Query: 186 SSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNNLLQ 237
+ + L++L L HN+++ + S + KL L++ N L+
Sbjct: 58 G--------MQFFTNLKELHLSHNQISDL---SPLKDLTKLEELSVNRNRLK 98
|
| >1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes} Length = 263 | Back alignment and structure |
|---|
Score = 47.7 bits (114), Expect = 4e-06
Identities = 13/86 (15%), Positives = 33/86 (38%), Gaps = 12/86 (13%)
Query: 165 DTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHP 224
+LG ++ + LS +++ + ++ + + + F N
Sbjct: 16 PGLANAVKQNLGKQSVTDLVS---------QKELSGVQNFNGDNSNIQSLAGMQFFTN-- 64
Query: 225 KLTTLNLTNNLLQGPTPRFNNSKLTV 250
L L+L++N + +P + +KL
Sbjct: 65 -LKELHLSHNQISDLSPLKDLTKLEE 89
|
| >1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes} Length = 263 | Back alignment and structure |
|---|
Score = 40.4 bits (95), Expect = 9e-04
Identities = 21/111 (18%), Positives = 36/111 (32%), Gaps = 20/111 (18%)
Query: 127 YLENNQLRGPIPSLVG--SLEFFSAYEANISGTIPDFIGTDTFPQLSYLDLGNNNLQGTI 184
+L+NN+LR SL+ +LE S + + +L LDL N +
Sbjct: 112 FLDNNELRD-TDSLIHLKNLEILSIRNNKLK----SIVMLGFLSKLEVLDLHGNEITN-- 164
Query: 185 PSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNNL 235
++ L + + L K P+L N +
Sbjct: 165 -------TGGLTRLKKVNWIDLTGQKCVN----EPVKYQPELYITNTVKDP 204
|
| >3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313 | Back alignment and structure |
|---|
Score = 55.8 bits (135), Expect = 1e-08
Identities = 45/211 (21%), Positives = 75/211 (35%), Gaps = 72/211 (34%)
Query: 423 ENRLGRGGVGTVYKGELKDG----TEVGVKRMELGSVTEQGIAQFESEITVLTK------ 472
LG G G+V +G LK +V VK M+L + +++ I +F SE +
Sbjct: 39 GKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNV 98
Query: 473 ---------------------------GTLGRHL-FNWEEEGLEPLEWNTRLNIALDVAR 504
G L +L ++ E G + + T L +D+A
Sbjct: 99 IRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIAL 158
Query: 505 G----------------------DD--MRVADFGLVRLVPENGKHSILTKVAGTFGYL-- 538
G DD + VADFGL + + + G +
Sbjct: 159 GMEYLSNRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYR-----QGRIAKMPV 213
Query: 539 ---APEYIVTGRITAKVDVYSFGMILMDLIT 566
A E + T+K DV++FG+ + ++ T
Sbjct: 214 KWIAIESLADRVYTSKSDVWAFGVTMWEIAT 244
|
| >2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A Length = 168 | Back alignment and structure |
|---|
Score = 53.6 bits (129), Expect = 1e-08
Identities = 21/74 (28%), Positives = 33/74 (44%), Gaps = 10/74 (13%)
Query: 164 TDTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNH 223
T F L +L L N L ++ +++ L L+ L L N++ G +
Sbjct: 45 TAEFVNLEFLSLINVGLI-SV--------SNLPKLPKLKKLELSENRIFGGLDML-AEKL 94
Query: 224 PKLTTLNLTNNLLQ 237
P LT LNL+ N L+
Sbjct: 95 PNLTHLNLSGNKLK 108
|
| >2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A Length = 168 | Back alignment and structure |
|---|
Score = 49.0 bits (117), Expect = 5e-07
Identities = 27/136 (19%), Positives = 49/136 (36%), Gaps = 22/136 (16%)
Query: 101 NIELQDQNRKGTVPPILKKLSSMAVMYLENNQLRGPIPSLVGSLEFFSAYEA-NISGT-I 158
++EL+++ P +++L L+N + + G F E ++ +
Sbjct: 15 HLELRNRT-----PAAVREL------VLDNCKSN--DGKIEGLTAEFVNLEFLSLINVGL 61
Query: 159 PDFIGTDTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVS 218
P+L L+L N + G + L L L+L NKL I +
Sbjct: 62 ISVSNLPKLPKLKKLELSENRIFGGLDMLA-------EKLPNLTHLNLSGNKLKDISTLE 114
Query: 219 SFNNHPKLTTLNLTNN 234
L +L+L N
Sbjct: 115 PLKKLECLKSLDLFNC 130
|
| >3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267 | Back alignment and structure |
|---|
Score = 54.9 bits (133), Expect = 2e-08
Identities = 42/205 (20%), Positives = 71/205 (34%), Gaps = 71/205 (34%)
Query: 423 ENRLGRGGVGTVYKGELKDGTEVGVKRMELGSVTEQGIAQFESEITVLTK---------- 472
+G G G V+ G + +V +K + G+++E+ F E V+ K
Sbjct: 13 VQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEE---DFIEEAEVMMKLSHPKLVQLY 69
Query: 473 ------------------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARGDDMR----- 509
G L +L T L + LDV G M
Sbjct: 70 GVCLEQAPICLVTEFMEHGCLSDYL----RTQRGLFAAETLLGMCLDVCEG--MAYLEEA 123
Query: 510 ---------------------VADFGLVRLVPENGKHSILTKVAGT---FGYLAPEYIVT 545
V+DFG+ R V ++ T GT + +PE
Sbjct: 124 CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD----QYTSSTGTKFPVKWASPEVFSF 179
Query: 546 GRITAKVDVYSFGMILMDLIT-GRK 569
R ++K DV+SFG+++ ++ + G+
Sbjct: 180 SRYSSKSDVWSFGVLMWEVFSEGKI 204
|
| >3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432 | Back alignment and structure |
|---|
Score = 55.5 bits (134), Expect = 2e-08
Identities = 21/78 (26%), Positives = 35/78 (44%), Gaps = 7/78 (8%)
Query: 497 NIALDVARGDD---MRVADFGL-VRLVPENGKHSILTKVAGTFGYLAPEYI---VTGRIT 549
NI + + ++DFGL +L S + V GT G++APE + T
Sbjct: 148 NILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPT 207
Query: 550 AKVDVYSFGMILMDLITG 567
VD++S G + +I+
Sbjct: 208 YTVDIFSAGCVFYYVISE 225
|
| >1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495 | Back alignment and structure |
|---|
Score = 55.9 bits (135), Expect = 3e-08
Identities = 39/198 (19%), Positives = 71/198 (35%), Gaps = 62/198 (31%)
Query: 423 ENRLGRGGVGTVYKGELKD-GTEVGVKRMELGSVTEQGIAQFESEITVLTK--------- 472
+++LG G G VY+G K V VK ++ ++ + +F E V+ +
Sbjct: 225 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE---EFLKEAAVMKEIKHPNLVQL 281
Query: 473 -------------------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG-------- 505
G L +L E + + L +A ++
Sbjct: 282 LGVCTREPPFYIITEFMTYGNLLDYL---RECNRQEVSAVVLLYMATQISSAMEYLEKKN 338
Query: 506 ----------------DDMRVADFGLVRLVPENG-KHSILTKVAGTFGYLAPEYIVTGRI 548
++VADFGL RL+ + K + APE + +
Sbjct: 339 FIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP--IKWTAPESLAYNKF 396
Query: 549 TAKVDVYSFGMILMDLIT 566
+ K DV++FG++L ++ T
Sbjct: 397 SIKSDVWAFGVLLWEIAT 414
|
| >2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C* Length = 239 | Back alignment and structure |
|---|
Score = 54.2 bits (131), Expect = 3e-08
Identities = 23/166 (13%), Positives = 47/166 (28%), Gaps = 38/166 (22%)
Query: 82 DPDPC---QWSHVICSDDGQVTNIELQDQNRKGTVPPILKKLSSMAVMYLENNQLRGPIP 138
PC Q + + I ++PP + L L LR IP
Sbjct: 4 SSPPCECHQEEDFRVTCKD-IQRIP--------SLPPSTQTL------KLIETHLRT-IP 47
Query: 139 SLV----GSLEFFSAYEANISGTIPDFIGTDTF---PQLSYLDLGNNNLQGTIPSS-FGM 190
S ++ + +F +++++++ N I
Sbjct: 48 SHAFSNLPNISRIYVSIDVTLQQLES----HSFYNLSKVTHIEIRNTRNLTYIDPDAL-- 101
Query: 191 PFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNNLL 236
L L+ L + + L ++ + L +T+N
Sbjct: 102 -----KELPLLKFLGIFNTGLKMFPDLTKVYSTDIFFILEITDNPY 142
|
| >2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C* Length = 239 | Back alignment and structure |
|---|
Score = 52.3 bits (126), Expect = 1e-07
Identities = 22/170 (12%), Positives = 49/170 (28%), Gaps = 37/170 (21%)
Query: 98 QVTNIELQDQNRKGTVPP-ILKKLSSMAVMYLENNQLRGPIPSLV----GSLEFFSAYEA 152
++ I + + LS + + + N + I L+F +
Sbjct: 56 NISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLGIFNT 115
Query: 153 NISGTIPDFIGTDTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLT 212
+ PD + L++ +N +IP + F + N L L +N T
Sbjct: 116 GLK-MFPDLTKVYSTDIFFILEITDNPYMTSIPVNA---FQGLCNE--TLTLKLYNNGFT 169
Query: 213 GIFPVSSFNN-------------------------HPKLTTLNLTNNLLQ 237
+ +FN + + L+++ +
Sbjct: 170 SV-QGYAFNGTKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVT 218
|
| >2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C* Length = 239 | Back alignment and structure |
|---|
Score = 45.4 bits (108), Expect = 2e-05
Identities = 25/164 (15%), Positives = 49/164 (29%), Gaps = 34/164 (20%)
Query: 98 QVTNIELQDQNRKGTVPP-ILKKLSSMAVMYLENNQLRGPIPSLVG-----SLEFFSAYE 151
+VT+IE+++ + P LK+L + + + N L+ P L +
Sbjct: 81 KVTHIEIRNTRNLTYIDPDALKELPLLKFLGIFNTGLKM-FPDLTKVYSTDIFFILEITD 139
Query: 152 ANISGTIPDFIGTDTFPQLSYLDLGNNNLQGTIPSSFGMPFAD-------------ISNL 198
+IP + L L NN ++ F ++ +
Sbjct: 140 NPYMTSIPVNAFQGLCNETLTLKLYNNGFT-SVQGYA---FNGTKLDAVYLNKNKYLTVI 195
Query: 199 ---------STLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTN 233
S L + +T + P + +L N
Sbjct: 196 DKDAFGGVYSGPSLLDVSQTSVTAL-PSKGLEHLKELIARNTWT 238
|
| >3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676 | Back alignment and structure |
|---|
Score = 55.1 bits (132), Expect = 4e-08
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 4/73 (5%)
Query: 497 NIALDVARGDDM-RVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVY 555
NI L + ++ D G + + + T+ GT YLAPE + + T VD +
Sbjct: 151 NIVLQPGPQRLIHKIIDLGYAKELDQGEL---CTEFVGTLQYLAPELLEQKKYTVTVDYW 207
Query: 556 SFGMILMDLITGR 568
SFG + + ITG
Sbjct: 208 SFGTLAFECITGF 220
|
| >3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283 | Back alignment and structure |
|---|
Score = 53.8 bits (130), Expect = 6e-08
Identities = 37/203 (18%), Positives = 67/203 (33%), Gaps = 74/203 (36%)
Query: 423 ENRLGRGGVGTVYKGELKDGTEVGVKRMELGSVTEQGIAQFESEITVLTK---------- 472
LG G G V G+ + +V +K ++ GS++E +F E V+
Sbjct: 29 LKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSED---EFIEEAKVMMNLSHEKLVQLY 85
Query: 473 ------------------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARGDDMR----- 509
G L +L E + L + DV M
Sbjct: 86 GVCTKQRPIFIITEYMANGCLLNYL----REMRHRFQTQQLLEMCKDVCEA--MEYLESK 139
Query: 510 ---------------------VADFGLVRLVPENGKHSILTKVAGTFGYL-----APEYI 543
V+DFGL R V ++ T G PE +
Sbjct: 140 QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDD----EYTSSVG--SKFPVRWSPPEVL 193
Query: 544 VTGRITAKVDVYSFGMILMDLIT 566
+ + ++K D+++FG+++ ++ +
Sbjct: 194 MYSKFSSKSDIWAFGVLMWEIYS 216
|
| >3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268 | Back alignment and structure |
|---|
Score = 53.3 bits (129), Expect = 6e-08
Identities = 44/205 (21%), Positives = 73/205 (35%), Gaps = 71/205 (34%)
Query: 423 ENRLGRGGVGTVYKGELKDGTEVGVKRMELGSVTEQGIAQFESEITVLTK---------- 472
LG G G V G+ K +V VK ++ GS++E +F E + K
Sbjct: 13 LKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSED---EFFQEAQTMMKLSHPKLVKFY 69
Query: 473 ------------------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARGDDMR----- 509
G L +L G + LE + L + DV G M
Sbjct: 70 GVCSKEYPIYIVTEYISNGCLLNYL---RSHG-KGLEPSQLLEMCYDVCEG--MAFLESH 123
Query: 510 ---------------------VADFGLVRLVPENGKHSILTKVAGT---FGYLAPEYIVT 545
V+DFG+ R V ++ GT + APE
Sbjct: 124 QFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDD----QYVSSVGTKFPVKWSAPEVFHY 179
Query: 546 GRITAKVDVYSFGMILMDLIT-GRK 569
+ ++K DV++FG+++ ++ + G+
Sbjct: 180 FKYSSKSDVWAFGILMWEVFSLGKM 204
|
| >4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299 | Back alignment and structure |
|---|
Score = 53.5 bits (129), Expect = 6e-08
Identities = 46/217 (21%), Positives = 70/217 (32%), Gaps = 74/217 (34%)
Query: 418 NNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVL------ 470
+F LGRGG G V++ + K D +KR+ L + + E+ L
Sbjct: 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELA-REKVMREVKALAKLEHP 63
Query: 471 ----------------------TKGTL--------GRHLFNW--EEEGLEPLEWNTRLNI 498
K L +L +W +E E + L+I
Sbjct: 64 GIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHI 123
Query: 499 ALDVARG----------------------DDMRV--ADFGLVRLV----------PENGK 524
L +A D V DFGLV +
Sbjct: 124 FLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPA 183
Query: 525 HSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMIL 561
++ T GT Y++PE I + KVD++S G+IL
Sbjct: 184 YARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLIL 220
|
| >1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290 | Back alignment and structure |
|---|
Score = 53.5 bits (129), Expect = 7e-08
Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 6/72 (8%)
Query: 497 NIALDVARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYS 556
NI + G +++ D GL L + + V GT ++APE VDVY+
Sbjct: 161 NIFITGPTGS-VKIGDLGLATLKRASFAKA----VIGTPEFMAPEMYEEK-YDESVDVYA 214
Query: 557 FGMILMDLITGR 568
FGM ++++ T
Sbjct: 215 FGMCMLEMATSE 226
|
| >1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290 | Back alignment and structure |
|---|
Score = 47.7 bits (114), Expect = 4e-06
Identities = 14/49 (28%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Query: 425 RLGRGGVGTVYKG-ELKDGTEVGVKRMELGSVTEQGIAQFESEITVLTK 472
+GRG TVYKG + + EV ++ +T+ +F+ E +L
Sbjct: 33 EIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKG 81
|
| >3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A Length = 251 | Back alignment and structure |
|---|
Score = 52.8 bits (127), Expect = 8e-08
Identities = 41/162 (25%), Positives = 60/162 (37%), Gaps = 36/162 (22%)
Query: 106 DQNRKGTVPP-ILKKLSSMAVMYLENNQLRGPIPSLVGSLEFFSAYEANISGTIPDFIGT 164
D N+ T+ + L+ + + L NNQL +P V F
Sbjct: 67 DYNQLQTLSAGVFDDLTELGTLGLANNQLAS-LPLGV-------------------F--- 103
Query: 165 DTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHP 224
D QL L LG N L+ F L+ L++L L N+L I P +F+
Sbjct: 104 DHLTQLDKLYLGGNQLKSLPSGVF-------DRLTKLKELRLNTNQLQSI-PAGAFDKLT 155
Query: 225 KLTTLNLTNNLLQG-PTPRFNNSKLTVDMRTGSN---CFCLD 262
L TL+L+ N LQ P F+ + N C +
Sbjct: 156 NLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCSRCE 197
|
| >3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A Length = 251 | Back alignment and structure |
|---|
Score = 43.9 bits (104), Expect = 7e-05
Identities = 21/74 (28%), Positives = 37/74 (50%), Gaps = 10/74 (13%)
Query: 165 DTFPQLSYLDLGNNNLQGTIPSS-FGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNH 223
+L++L+L N LQ T+ + F +L+ L L L +N+L + P+ F++
Sbjct: 56 RGLTKLTWLNLDYNQLQ-TLSAGVF-------DDLTELGTLGLANNQLASL-PLGVFDHL 106
Query: 224 PKLTTLNLTNNLLQ 237
+L L L N L+
Sbjct: 107 TQLDKLYLGGNQLK 120
|
| >3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A Length = 251 | Back alignment and structure |
|---|
Score = 43.1 bits (102), Expect = 1e-04
Identities = 23/81 (28%), Positives = 36/81 (44%), Gaps = 12/81 (14%)
Query: 157 TIPDFIGTDTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFP 216
++P I DT LDL + L ++F L+ L L+L +N+L +
Sbjct: 28 SVPSGIPADT----EKLDLQSTGLATLSDATF-------RGLTKLTWLNLDYNQLQTL-S 75
Query: 217 VSSFNNHPKLTTLNLTNNLLQ 237
F++ +L TL L NN L
Sbjct: 76 AGVFDDLTELGTLGLANNQLA 96
|
| >2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens} Length = 193 | Back alignment and structure |
|---|
Score = 51.9 bits (125), Expect = 9e-08
Identities = 26/88 (29%), Positives = 40/88 (45%), Gaps = 12/88 (13%)
Query: 165 DTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHP 224
+ L+ +DL NN + SF SN++ L L L +N+L I P +F+
Sbjct: 51 SNYKHLTLIDLSNNRISTLSNQSF-------SNMTQLLTLILSYNRLRCI-PPRTFDGLK 102
Query: 225 KLTTLNLTNNLLQGPTPR--FNN-SKLT 249
L L+L N + P FN+ S L+
Sbjct: 103 SLRLLSLHGNDISV-VPEGAFNDLSALS 129
|
| >2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens} Length = 193 | Back alignment and structure |
|---|
Score = 48.1 bits (115), Expect = 1e-06
Identities = 33/138 (23%), Positives = 52/138 (37%), Gaps = 36/138 (26%)
Query: 99 VTNIELQDQNRKGTVPPILKKLSSMAVMYLENNQLRGPIPSLVGSLEFFSAYEANISGTI 158
VT + L D N+ VP L + ++ L NN++ T+
Sbjct: 33 VTELYL-DGNQFTLVPKELSNYKHLTLIDLSNNRIS----------------------TL 69
Query: 159 PD--FIGTDTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFP 216
+ F QL L L N L+ P +F L +L LSL N ++ + P
Sbjct: 70 SNQSF---SNMTQLLTLILSYNRLRCIPPRTF-------DGLKSLRLLSLHGNDISVV-P 118
Query: 217 VSSFNNHPKLTTLNLTNN 234
+FN+ L+ L + N
Sbjct: 119 EGAFNDLSALSHLAIGAN 136
|
| >2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens} Length = 193 | Back alignment and structure |
|---|
Score = 46.1 bits (110), Expect = 7e-06
Identities = 21/80 (26%), Positives = 34/80 (42%), Gaps = 13/80 (16%)
Query: 158 IPDFIGTDTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPV 217
+P I D + L L N +P SN L + L +N+++ +
Sbjct: 25 LPKGIPRDV----TELYLDGNQFT-LVPKEL-------SNYKHLTLIDLSNNRISTL-SN 71
Query: 218 SSFNNHPKLTTLNLTNNLLQ 237
SF+N +L TL L+ N L+
Sbjct: 72 QSFSNMTQLLTLILSYNRLR 91
|
| >1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7 Length = 192 | Back alignment and structure |
|---|
Score = 51.5 bits (124), Expect = 1e-07
Identities = 33/137 (24%), Positives = 54/137 (39%), Gaps = 34/137 (24%)
Query: 100 TNIELQDQNRKGTVPP--ILKKLSSMAVMYLENNQLRGPIPSLVGSLEFFSAYEANISGT 157
T + L D N G + + +L + + L+ NQL G I
Sbjct: 32 TELLLND-NELGRISSDGLFGRLPHLVKLELKRNQLTG-IEPNA---------------- 73
Query: 158 IPDFIGTDTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPV 217
F + + L LG N ++ I + M F L L+ L+L N+++ +
Sbjct: 74 ---F---EGASHIQELQLGENKIK-EISN--KM-FL---GLHQLKTLNLYDNQISCV-MP 119
Query: 218 SSFNNHPKLTTLNLTNN 234
SF + LT+LNL +N
Sbjct: 120 GSFEHLNSLTSLNLASN 136
|
| >1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7 Length = 192 | Back alignment and structure |
|---|
Score = 49.6 bits (119), Expect = 5e-07
Identities = 26/88 (29%), Positives = 38/88 (43%), Gaps = 12/88 (13%)
Query: 165 DTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHP 224
P L L+L N L G P++F S +++L LG NK+ I F
Sbjct: 51 GRLPHLVKLELKRNQLTGIEPNAF-------EGASHIQELQLGENKIKEI-SNKMFLGLH 102
Query: 225 KLTTLNLTNNLLQGPTPR--FNN-SKLT 249
+L TLNL +N + F + + LT
Sbjct: 103 QLKTLNLYDNQISC-VMPGSFEHLNSLT 129
|
| >3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298 | Back alignment and structure |
|---|
Score = 52.7 bits (127), Expect = 1e-07
Identities = 41/204 (20%), Positives = 71/204 (34%), Gaps = 64/204 (31%)
Query: 422 EENRLGRGGVGTVYKGELKDG----TEVGVKRMELGSVTEQGIAQFESEITVL------- 470
+ +G+G G VY GE D + +K + + Q + F E ++
Sbjct: 25 SDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRIT-EMQQVEAFLREGLLMRGLNHPN 83
Query: 471 ----------------------TKGTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG--- 505
G L + + + + ++ L VARG
Sbjct: 84 VLALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRN----PTVKDLISFGLQVARGMEY 139
Query: 506 -------------------DD--MRVADFGLVRLVPENGKHSILTKVAGTF--GYLAPEY 542
+ ++VADFGL R + + +S+ + A E
Sbjct: 140 LAEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALES 199
Query: 543 IVTGRITAKVDVYSFGMILMDLIT 566
+ T R T K DV+SFG++L +L+T
Sbjct: 200 LQTYRFTTKSDVWSFGVLLWELLT 223
|
| >1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4 Length = 176 | Back alignment and structure |
|---|
Score = 50.8 bits (122), Expect = 1e-07
Identities = 22/120 (18%), Positives = 37/120 (30%), Gaps = 13/120 (10%)
Query: 117 LKKLSSMAVMYLENNQLRGPIPSLVGSLEFFSAYEA-NISGT-IPDFIGTDTFPQLSYLD 174
+ L + IP + ++A + S I G +L L
Sbjct: 15 YTNAVRDRELDLRGYK----IPVIENLGATLDQFDAIDFSDNEIRKLDGFPLLRRLKTLL 70
Query: 175 LGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNN 234
+ NN + I L L +L L +N L + + + LT L + N
Sbjct: 71 VNNNRIC-RIGEGLD------QALPDLTELILTNNSLVELGDLDPLASLKSLTYLCILRN 123
|
| >1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4 Length = 176 | Back alignment and structure |
|---|
Score = 50.0 bits (120), Expect = 3e-07
Identities = 18/74 (24%), Positives = 27/74 (36%), Gaps = 10/74 (13%)
Query: 164 TDTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNH 223
T Q +D +N ++ L L+ L + +N++ I
Sbjct: 38 GATLDQFDAIDFSDNEIR---------KLDGFPLLRRLKTLLVNNNRICRIGE-GLDQAL 87
Query: 224 PKLTTLNLTNNLLQ 237
P LT L LTNN L
Sbjct: 88 PDLTELILTNNSLV 101
|
| >2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326 | Back alignment and structure |
|---|
Score = 52.8 bits (127), Expect = 1e-07
Identities = 39/208 (18%), Positives = 73/208 (35%), Gaps = 74/208 (35%)
Query: 423 ENRLGRGGVGTVYKGEL-----KDGTEVGVKRMELGSVTEQGIAQFESEITVLTK----- 472
+LG+G G+V G V VK+++ TE+ + FE EI +L
Sbjct: 46 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS--TEEHLRDFEREIEILKSLQHDN 103
Query: 473 -------------------------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG-- 505
G+L +L +E ++ L + +G
Sbjct: 104 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER----IDHIKLLQYTSQICKGME 159
Query: 506 ----------------------DDMRVADFGLVRLVPENGKHSILTKVAGTFGYL----- 538
+ +++ DFGL +++P++ ++ G
Sbjct: 160 YLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEYY----KVKEPGESPIFWY 215
Query: 539 APEYIVTGRITAKVDVYSFGMILMDLIT 566
APE + + + DV+SFG++L +L T
Sbjct: 216 APESLTESKFSVASDVWSFGVVLYELFT 243
|
| >4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302 | Back alignment and structure |
|---|
Score = 52.7 bits (127), Expect = 1e-07
Identities = 37/206 (17%), Positives = 65/206 (31%), Gaps = 69/206 (33%)
Query: 423 ENRLGRGGVGTVYKGELK-----DGTEVGVKRMELGSVTEQGIAQFESEITVLTK----- 472
LG G G V G +V VK ++ S IA + EI +L
Sbjct: 26 IRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPES-GGNHIADLKKEIEILRNLYHEN 84
Query: 473 -------------------------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG-- 505
G+L +L + + + +L A+ + +G
Sbjct: 85 IVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNK----INLKQQLKYAVQICKGMD 140
Query: 506 ----------------------DDMRVADFGLVRLVPENGKHSILTKVAGT---FGYLAP 540
+++ DFGL + + + T + AP
Sbjct: 141 YLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETD--KEYYTVKDDRDSPVFWYAP 198
Query: 541 EYIVTGRITAKVDVYSFGMILMDLIT 566
E ++ + DV+SFG+ L +L+T
Sbjct: 199 ECLMQSKFYIASDVWSFGVTLHELLT 224
|
| >4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C* Length = 350 | Back alignment and structure |
|---|
Score = 52.5 bits (126), Expect = 2e-07
Identities = 22/147 (14%), Positives = 48/147 (32%), Gaps = 22/147 (14%)
Query: 100 TNIELQDQNRKGTVPP-ILKKLSSMAVMYLENNQLRGPIPSLV----GSLEFFSAYEANI 154
I ++ N + P + L ++ + + N ++ +P + +
Sbjct: 82 HEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKH-LPDVHKIHSLQKVLLDIQDNIN 140
Query: 155 SGTIPDFIGTDTF----PQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNK 210
TI ++F + L L N +Q I +S F + E +N
Sbjct: 141 IHTIER----NSFVGLSFESVILWLNKNGIQ-EIHNSA---F---NGTQLDELNLSDNNN 189
Query: 211 LTGIFPVSSFNNHPKLTTLNLTNNLLQ 237
L + P F+ L+++ +
Sbjct: 190 LEEL-PNDVFHGASGPVILDISRTRIH 215
|
| >4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C* Length = 350 | Back alignment and structure |
|---|
Score = 52.1 bits (125), Expect = 2e-07
Identities = 16/79 (20%), Positives = 31/79 (39%), Gaps = 9/79 (11%)
Query: 162 IGTDTF---PQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVS 218
I F L +++ N++ I + F+++ L + N L I
Sbjct: 45 IQKGAFSGFGDLEKIEISQNDVLEVIEAD---VFSNLPKLHEIR--IEKANNLLYI-NPE 98
Query: 219 SFNNHPKLTTLNLTNNLLQ 237
+F N P L L ++N ++
Sbjct: 99 AFQNLPNLQYLLISNTGIK 117
|
| >4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C* Length = 350 | Back alignment and structure |
|---|
Score = 52.1 bits (125), Expect = 2e-07
Identities = 14/78 (17%), Positives = 23/78 (29%), Gaps = 11/78 (14%)
Query: 157 TIPDFIGTDTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFP 216
IP + L L+ I S LE + + N + +
Sbjct: 23 EIPSDL----PRNAIELRFVLTKLR-VIQKG------AFSGFGDLEKIEISQNDVLEVIE 71
Query: 217 VSSFNNHPKLTTLNLTNN 234
F+N PKL + +
Sbjct: 72 ADVFSNLPKLHEIRIEKA 89
|
| >3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327 | Back alignment and structure |
|---|
Score = 52.2 bits (126), Expect = 2e-07
Identities = 40/207 (19%), Positives = 69/207 (33%), Gaps = 68/207 (32%)
Query: 423 ENRLGRGGVGTVYKGELKDG-----TEVGVKRMELGSVTEQGIAQFESEITVLTK----- 472
LG G GTVYKG V +K + + + + + E V+
Sbjct: 20 IKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT-SPKANKEILDEAYVMASVDNPH 78
Query: 473 ----------------------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG----D 506
G L ++ ++ + LN + +A+G +
Sbjct: 79 VCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDN----IGSQYLLNWCVQIAKGMNYLE 134
Query: 507 DMR--------------------VADFGLVRLVPENGKHSILTKVAGT---FGYLAPEYI 543
D R + DFGL +L+ K G ++A E I
Sbjct: 135 DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE---YHAEGGKVPIKWMALESI 191
Query: 544 VTGRITAKVDVYSFGMILMDLIT-GRK 569
+ T + DV+S+G+ + +L+T G K
Sbjct: 192 LHRIYTHQSDVWSYGVTVWELMTFGSK 218
|
| >3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} Length = 382 | Back alignment and structure |
|---|
Score = 52.4 bits (126), Expect = 2e-07
Identities = 46/223 (20%), Positives = 72/223 (32%), Gaps = 87/223 (39%)
Query: 423 ENRLGRGGVGTVYKGELKD--------GTEVGVKRMELGSVTEQGIAQFESEITVLTKGT 474
LG G G V E T+V VK ++ + TE+ ++ SE+ ++
Sbjct: 74 GKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDA-TEKDLSDLISEMEMMKM-- 130
Query: 475 LGRH------------------------------------------LFNWEEEGLEPLEW 492
+G+H +N E L
Sbjct: 131 IGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSS 190
Query: 493 NTRLNIALDVARG----------------------DD--MRVADFGLVRLVPENGKHSIL 528
++ A VARG +D M++ADFGL R +
Sbjct: 191 KDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHID----- 245
Query: 529 TKVAGTFGYL-----APEYIVTGRITAKVDVYSFGMILMDLIT 566
T G L APE + T + DV+SFG++L ++ T
Sbjct: 246 YYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 288
|
| >1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327 | Back alignment and structure |
|---|
Score = 51.9 bits (125), Expect = 2e-07
Identities = 44/218 (20%), Positives = 69/218 (31%), Gaps = 85/218 (38%)
Query: 423 ENRLGRGGVGTVYKGELKDG---TEVGVKRMELGSVTEQGIAQFESEITVLTKGTLGRH- 478
++ +G G G V K +K + +KRM+ + ++ F E+ VL K LG H
Sbjct: 30 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYA-SKDDHRDFAGELEVLCK--LGHHP 86
Query: 479 -----------------------------------------LFNWEEEGLEPLEWNTRLN 497
F L L+
Sbjct: 87 NIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLH 146
Query: 498 IALDVARG----------------------DD--MRVADFGLVRLVPENGKHSILTKVAG 533
A DVARG ++ ++ADFGL R V
Sbjct: 147 FAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSR--------GQEVYVKK 198
Query: 534 TFGYL-----APEYIVTGRITAKVDVYSFGMILMDLIT 566
T G L A E + T DV+S+G++L ++++
Sbjct: 199 TMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 236
|
| >1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287 | Back alignment and structure |
|---|
Score = 51.9 bits (125), Expect = 2e-07
Identities = 33/206 (16%), Positives = 73/206 (35%), Gaps = 65/206 (31%)
Query: 422 EENRLGRGGVGTVYKGELKDG---TEVGVKRMELGSVTEQGIAQFESEITVLTK------ 472
+ LG G G+V +G + +V +K ++ G+ + + E ++ +
Sbjct: 14 ADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGT-EKADTEEMMREAQIMHQLDNPYI 72
Query: 473 ---------------------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG----DD 507
G L + L EE + + + V+ G ++
Sbjct: 73 VRLIGVCQAEALMLVMEMAGGGPLHKFLVGKREE----IPVSNVAELLHQVSMGMKYLEE 128
Query: 508 MR--------------------VADFGLVRLVPENGKHSILTKVAGT---FGYLAPEYIV 544
++DFGL + + + S T + + APE I
Sbjct: 129 KNFVHRDLAARNVLLVNRHYAKISDFGLSKALGAD--DSYYTARSAGKWPLKWYAPECIN 186
Query: 545 TGRITAKVDVYSFGMILMDLIT-GRK 569
+ +++ DV+S+G+ + + ++ G+K
Sbjct: 187 FRKFSSRSDVWSYGVTMWEALSYGQK 212
|
| >2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613 | Back alignment and structure |
|---|
Score = 52.3 bits (125), Expect = 3e-07
Identities = 33/205 (16%), Positives = 73/205 (35%), Gaps = 65/205 (31%)
Query: 423 ENRLGRGGVGTVYKGELKDG---TEVGVKRMELGSVTEQGIAQFESEITVLTK------- 472
+ LG G G+V +G + +V +K ++ G+ + + E ++ +
Sbjct: 341 DIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGT-EKADTEEMMREAQIMHQLDNPYIV 399
Query: 473 --------------------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG----DDM 508
G L + L EE + + + V+ G ++
Sbjct: 400 RLIGVCQAEALMLVMEMAGGGPLHKFLVGKREE----IPVSNVAELLHQVSMGMKYLEEK 455
Query: 509 R--------------------VADFGLVRLVPENGKHSILTKVAGT---FGYLAPEYIVT 545
++DFGL + + + S T + + APE I
Sbjct: 456 NFVHRNLAARNVLLVNRHYAKISDFGLSKALGAD--DSYYTARSAGKWPLKWYAPECINF 513
Query: 546 GRITAKVDVYSFGMILMDLIT-GRK 569
+ +++ DV+S+G+ + + ++ G+K
Sbjct: 514 RKFSSRSDVWSYGVTMWEALSYGQK 538
|
| >3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295 | Back alignment and structure |
|---|
Score = 51.1 bits (123), Expect = 4e-07
Identities = 39/208 (18%), Positives = 72/208 (34%), Gaps = 74/208 (35%)
Query: 423 ENRLGRGGVGTVYKGELK-----DGTEVGVKRMELGSVTEQGIAQFESEITVLTK----- 472
+LG+G G+V G V VK+++ TE+ + FE EI +L
Sbjct: 15 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS--TEEHLRDFEREIEILKSLQHDN 72
Query: 473 -------------------------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG-- 505
G+L +L +E ++ L + +G
Sbjct: 73 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER----IDHIKLLQYTSQICKGME 128
Query: 506 ----------------------DDMRVADFGLVRLVPENGKHSILTKVAGTFGYL----- 538
+ +++ DFGL +++P++ + G
Sbjct: 129 YLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFF----KVKEPGESPIFWY 184
Query: 539 APEYIVTGRITAKVDVYSFGMILMDLIT 566
APE + + + DV+SFG++L +L T
Sbjct: 185 APESLTESKFSVASDVWSFGVVLYELFT 212
|
| >1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291 | Back alignment and structure |
|---|
Score = 51.1 bits (123), Expect = 4e-07
Identities = 35/206 (16%), Positives = 70/206 (33%), Gaps = 65/206 (31%)
Query: 422 EENRLGRGGVGTVYKGELKDG---TEVGVKRMELGSVTEQGIAQFESEITVLTK------ 472
E+ LG G GTV KG + V VK ++ + + +E V+ +
Sbjct: 21 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 80
Query: 473 ---------------------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG----DD 507
G L ++L + + + + V+ G ++
Sbjct: 81 VRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNI-----IELVHQVSMGMKYLEE 135
Query: 508 MR--------------------VADFGLVRLVPENGKHSILTKVAGT---FGYLAPEYIV 544
++DFGL + + + + + APE I
Sbjct: 136 SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRAD--ENYYKAQTHGKWPVKWYAPECIN 193
Query: 545 TGRITAKVDVYSFGMILMDLIT-GRK 569
+ ++K DV+SFG+++ + + G+K
Sbjct: 194 YYKFSSKSDVWSFGVLMWEAFSYGQK 219
|
| >4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319 | Back alignment and structure |
|---|
Score = 51.3 bits (123), Expect = 4e-07
Identities = 18/82 (21%), Positives = 29/82 (35%), Gaps = 13/82 (15%)
Query: 497 NIALDVARGDDMRV--ADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRI------ 548
NI + DFG R + ++ + + GT YL P+ +
Sbjct: 142 NIMRVIGEDGQSVYKLTDFGAARELEDDEQ---FVSLYGTEEYLHPDMYERAVLRKDHQK 198
Query: 549 --TAKVDVYSFGMILMDLITGR 568
A VD++S G+ TG
Sbjct: 199 KYGATVDLWSIGVTFYHAATGS 220
|
| >3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373 | Back alignment and structure |
|---|
Score = 51.7 bits (124), Expect = 4e-07
Identities = 40/199 (20%), Positives = 64/199 (32%), Gaps = 65/199 (32%)
Query: 423 ENRLGRGGVGTVYKGELKDG----TEVGVKRMELGSVTEQGIAQFESEITVLTK------ 472
+GRG G VY G L D VK + + ++QF +E ++
Sbjct: 94 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRIT-DIGEVSQFLTEGIIMKDFSHPNV 152
Query: 473 -----------------------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG---- 505
G L + + L VA+G
Sbjct: 153 LSLLGICLRSEGSPLVVLPYMKHGDLRNFI----RNETHNPTVKDLIGFGLQVAKGMKFL 208
Query: 506 ------------------DD--MRVADFGLVRLVPENGKHSILTKVAGTF--GYLAPEYI 543
+ ++VADFGL R + + S+ K ++A E +
Sbjct: 209 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESL 268
Query: 544 VTGRITAKVDVYSFGMILM 562
T + T K DV+SFG +L+
Sbjct: 269 QTQKFTTKSDVWSFG-VLL 286
|
| >2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... Length = 334 | Back alignment and structure |
|---|
Score = 51.1 bits (123), Expect = 4e-07
Identities = 39/223 (17%), Positives = 71/223 (31%), Gaps = 87/223 (39%)
Query: 423 ENRLGRGGVGTVYKGELKD--------GTEVGVKRMELGSVTEQGIAQFESEITVLTKGT 474
LG G G V E V VK ++ + TE+ ++ SE+ ++
Sbjct: 40 GKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDA-TEKDLSDLVSEMEMMKM-- 96
Query: 475 LGRH------------------------------------------LFNWEEEGLEPLEW 492
+G+H ++ E + +
Sbjct: 97 IGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTF 156
Query: 493 NTRLNIALDVARG----------------------DD--MRVADFGLVRLVPENGKHSIL 528
++ +ARG ++ M++ADFGL R + +
Sbjct: 157 KDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYY--- 213
Query: 529 TKVAGTFGYL-----APEYIVTGRITAKVDVYSFGMILMDLIT 566
T G L APE + T + DV+SFG+++ ++ T
Sbjct: 214 --KKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
|
| >2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... Length = 316 | Back alignment and structure |
|---|
Score = 50.7 bits (122), Expect = 5e-07
Identities = 39/221 (17%), Positives = 67/221 (30%), Gaps = 86/221 (38%)
Query: 424 NRLGRGGVGTVYKGELKD------GTEVGVKRMELGSVTEQGIAQFESEITVLTKGTLGR 477
LGRG G V + + V VK ++ G+ T SE+ +L +G
Sbjct: 33 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA-THSEHRALMSELKILIH--IGH 89
Query: 478 H-------------------------------------------LFNWEEEGLEPLEWNT 494
H E+ + L
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 149
Query: 495 RLNIALDVARG----------------------DD--MRVADFGLVRLVPENGKHSILTK 530
+ + VA+G + +++ DFGL R + ++ +
Sbjct: 150 LICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY----- 204
Query: 531 VAGTFGYL-----APEYIVTGRITAKVDVYSFGMILMDLIT 566
V L APE I T + DV+SFG++L ++ +
Sbjct: 205 VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
|
| >2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A Length = 370 | Back alignment and structure |
|---|
Score = 51.2 bits (123), Expect = 5e-07
Identities = 40/223 (17%), Positives = 73/223 (32%), Gaps = 87/223 (39%)
Query: 423 ENRLGRGGVGTVYKGELKD--------GTEVGVKRMELGSVTEQGIAQFESEITVLTKGT 474
LG G G V E V VK ++ + TE+ ++ SE+ ++
Sbjct: 86 GKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDA-TEKDLSDLVSEMEMMKM-- 142
Query: 475 LGRH------------------------------------------LFNWEEEGLEPLEW 492
+G+H ++ E + +
Sbjct: 143 IGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTF 202
Query: 493 NTRLNIALDVARG----------------------DD--MRVADFGLVRLVPENGKHSIL 528
++ +ARG ++ M++ADFGL R + ++I
Sbjct: 203 KDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDI-----NNID 257
Query: 529 TKVAGTFGYL-----APEYIVTGRITAKVDVYSFGMILMDLIT 566
T G L APE + T + DV+SFG+++ ++ T
Sbjct: 258 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 300
|
| >3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325 | Back alignment and structure |
|---|
Score = 50.8 bits (122), Expect = 6e-07
Identities = 41/207 (19%), Positives = 68/207 (32%), Gaps = 68/207 (32%)
Query: 423 ENRLGRGGVGTVYKGELKDG-----TEVGVKRMELGSVTEQGIAQFESEITVLTK----- 472
LG G GTV+KG V +K +E S Q + +
Sbjct: 18 LKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKS-GRQSFQAVTDHMLAIGSLDHAH 76
Query: 473 ----------------------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG----D 506
G+L H+ L LN + +A+G +
Sbjct: 77 IVRLLGLCPGSSLQLVTQYLPLGSLLDHVRQHRGA----LGPQLLLNWGVQIAKGMYYLE 132
Query: 507 DMR--------------------VADFGLVRLVPENGKHSILTKVAGT---FGYLAPEYI 543
+ VADFG+ L+P + K + ++A E I
Sbjct: 133 EHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQ---LLYSEAKTPIKWMALESI 189
Query: 544 VTGRITAKVDVYSFGMILMDLIT-GRK 569
G+ T + DV+S+G+ + +L+T G +
Sbjct: 190 HFGKYTHQSDVWSYGVTVWELMTFGAE 216
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 51.8 bits (123), Expect = 6e-07
Identities = 38/291 (13%), Positives = 72/291 (24%), Gaps = 79/291 (27%)
Query: 371 FLYIRNKKSSETVPI---QVLRPRICGISVVHSVDFGDMAIPIQVLRNATNNFSEENRL- 426
++ R++ ++ V R + P LR A +
Sbjct: 112 YIEQRDRLYNDNQVFAKYNVSRLQ-----------------PYLKLRQALLELRPAKNVL 154
Query: 427 --GRGGVG-------TVYKGELKDGTEVGVKRMELGSVTEQG---------IAQFESEIT 468
G G G +++ + + + L + + Q + T
Sbjct: 155 IDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWT 214
Query: 469 VLTKGTLG-RHLFNWEEEGLEPLEWNTRLNIAL----DVARGDDMRVADFG---LV---- 516
+ + + + + L L + L +V + L+
Sbjct: 215 SRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRF 274
Query: 517 -----RLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVV 571
L H L + T E + K DL + V
Sbjct: 275 KQVTDFLSAATTTHISLDHHSMTLT--PDE---VKSLLLKY----LDCRPQDL---PREV 322
Query: 572 DATHSDP--------EYIIHLATWFQKMHKNHDTFQMAIDKTI-QLDEENL 613
T+ P LATW H N D I+ ++ L+
Sbjct: 323 LTTN--PRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEY 371
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 47.5 bits (112), Expect = 1e-05
Identities = 78/564 (13%), Positives = 154/564 (27%), Gaps = 149/564 (26%)
Query: 123 MAVMYLENNQLRGPIPSLVGSLEFFSAYEANISGTIPDFIGTD-TFPQLSYLDLGNNNLQ 181
M+ + E Q PS++ + + F + + Q YL L L
Sbjct: 95 MSPIKTEQRQ-----PSMM--TRMYIEQRDRLYNDNQVFAKYNVSRLQP-YLKL-RQALL 145
Query: 182 GTIPSSF----GMPFADISNL--STLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNNL 235
P+ G+ + + + + IF ++ N + T L + L
Sbjct: 146 ELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKL 205
Query: 236 LQGPTPRFNNSKLTVDMRTGSNCFCLDDPGLACDSRVNILLSIAESMGYPE---VLAESR 292
L P + S + L S L + +S Y VL +
Sbjct: 206 LYQIDPNWT-----------SRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQ 254
Query: 293 KGNDPCPTYKYWK--GISC-------------DIGGNITENVVVITDGNPDVEKES---- 333
+ K W +SC + T ++ + E
Sbjct: 255 ---NA----KAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLL 307
Query: 334 -----NSPGSPPGSGSKIQILGITLGSVIGDFCGLFVVGLGVFLYIRNKKSSETVP--IQ 386
P P + S+I + + + ++ K + + +
Sbjct: 308 LKYLDCRPQDLPREVLTTNPRRL---SIIAESIRDGLATWDNWKHVNCDKLTTIIESSLN 364
Query: 387 VLRP-------RICGISVVHSVDF-GDMAIPIQVL----RNATNNFSEE--NRLGRGGVG 432
VL P + F IP +L + + N+L +
Sbjct: 365 VLEPAEYRKMFDRLSV-------FPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYS-- 415
Query: 433 TVYKGELKDGT--------EVGVKRMELGSVTEQGIAQFESEITVLTKGT---------- 474
+ + + K+ T E+ VK ++ + + T +
Sbjct: 416 -LVEKQPKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFY 474
Query: 475 --LGRHLFNWEEEGLEPLEWNTRLNIALDVARGDDMRVADFGLVRL----VPENGKHSIL 528
+G HL N E + LD F ++ N SIL
Sbjct: 475 SHIGHHLKNIEHPE----RMTLFRMVFLDF---------RFLEQKIRHDSTAWNASGSIL 521
Query: 529 TKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT-----GRKVVDATHSDPEYIIH 583
+ Y Y I Y ++ ++ ++ + ++D ++
Sbjct: 522 NTLQQLKFYK--PY-----ICDNDPKYE--RLVNAILDFLPKIEENLICSKYTD---LLR 569
Query: 584 LATWFQKMHKNHDTFQMAIDKTIQ 607
+A M ++ F+ A K +Q
Sbjct: 570 IAL----MAEDEAIFEEA-HKQVQ 588
|
| >3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288 | Back alignment and structure |
|---|
Score = 50.3 bits (121), Expect = 6e-07
Identities = 40/202 (19%), Positives = 71/202 (35%), Gaps = 70/202 (34%)
Query: 423 ENRLGRGGVGTVYKGELKDG-TEVGVKRMELGSVTEQGIAQFESEITVLTK--------- 472
+++LG G G VY+G K V VK ++ ++ + +F E V+ +
Sbjct: 18 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE---EFLKEAAVMKEIKHPNLVQL 74
Query: 473 -------------------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG-------- 505
G L +L E + + L +A ++
Sbjct: 75 LGVCTREPPFYIITEFMTYGNLLDYL---RECNRQEVSAVVLLYMATQISSAMEYLEKKN 131
Query: 506 ----------------DDMRVADFGLVRLVPENGKHSILTKVAGTFGYL-----APEYIV 544
++VADFGL RL+ + T A APE +
Sbjct: 132 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGD------TYTAHAGAKFPIKWTAPESLA 185
Query: 545 TGRITAKVDVYSFGMILMDLIT 566
+ + K DV++FG++L ++ T
Sbjct: 186 YNKFSIKSDVWAFGVLLWEIAT 207
|
| >3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298 | Back alignment and structure |
|---|
Score = 50.3 bits (121), Expect = 6e-07
Identities = 41/199 (20%), Positives = 66/199 (33%), Gaps = 65/199 (32%)
Query: 423 ENRLGRGGVGTVYKGELKDG----TEVGVKRMELGSVTEQGIAQFESEITVLTK------ 472
+GRG G VY G L D VK + + ++QF +E ++
Sbjct: 30 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRIT-DIGEVSQFLTEGIIMKDFSHPNV 88
Query: 473 -----------------------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG---- 505
G L + N + L VA+G
Sbjct: 89 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN----PTVKDLIGFGLQVAKGMKYL 144
Query: 506 ------------------DD--MRVADFGLVRLVPENGKHSILTKVAGTF--GYLAPEYI 543
+ ++VADFGL R + + +S+ K ++A E +
Sbjct: 145 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 204
Query: 544 VTGRITAKVDVYSFGMILM 562
T + T K DV+SFG +L+
Sbjct: 205 QTQKFTTKSDVWSFG-VLL 222
|
| >4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396 | Back alignment and structure |
|---|
Score = 51.0 bits (122), Expect = 7e-07
Identities = 18/82 (21%), Positives = 29/82 (35%), Gaps = 13/82 (15%)
Query: 497 NIALDVARGDDMRV--ADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRI------ 548
NI + DFG R + ++ + + GT YL P+ +
Sbjct: 142 NIMRVIGEDGQSVYKLTDFGAARELEDDEQ---FVSLYGTEEYLHPDMYERAVLRKDHQK 198
Query: 549 --TAKVDVYSFGMILMDLITGR 568
A VD++S G+ TG
Sbjct: 199 KYGATVDLWSIGVTFYHAATGS 220
|
| >3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A Length = 286 | Back alignment and structure |
|---|
Score = 50.1 bits (120), Expect = 7e-07
Identities = 19/178 (10%), Positives = 40/178 (22%), Gaps = 50/178 (28%)
Query: 425 RLGRGGVGTVYKGE-LKDGTEVGVKRMEL-GSVTEQGIAQFESE------------ITVL 470
G ++ +V + ++ G + + + + S VL
Sbjct: 38 FHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVL 97
Query: 471 TKGTL------------GRHLFNWEEEGLEPLEWNTRLNIALDVARGDDMRVA-DFGLV- 516
G L + P+ + +A A G+
Sbjct: 98 DVVHTRAGGLVVAEWIRGGSLQEVADTSPSPVG---AIRAMQSLAAA--ADAAHRAGVAL 152
Query: 517 RLV-PENGKHSIL-----TKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGR 568
+ P + V + + D+ G L L+ R
Sbjct: 153 SIDHPSR----VRVSIDGDVVLAYPATMPDA-------NPQDDIRGIGASLYALLVNR 199
|
| >3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504 | Back alignment and structure |
|---|
Score = 50.5 bits (121), Expect = 1e-06
Identities = 19/62 (30%), Positives = 33/62 (53%), Gaps = 4/62 (6%)
Query: 507 DMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT 566
++++ DFGL ++ L GT Y+APE ++ + K DV+S G+I+ L+
Sbjct: 187 NIKIVDFGLSSFFSKD---YKLRDRLGTAYYIAPE-VLKKKYNEKCDVWSCGVIMYILLC 242
Query: 567 GR 568
G
Sbjct: 243 GY 244
|
| >3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313 | Back alignment and structure |
|---|
Score = 50.0 bits (120), Expect = 1e-06
Identities = 18/70 (25%), Positives = 29/70 (41%), Gaps = 11/70 (15%)
Query: 510 VADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIV-----------TGRITAKVDVYSFG 558
+ DFG+ + + + GT Y+ PE I +I+ K DV+S G
Sbjct: 167 LIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLG 226
Query: 559 MILMDLITGR 568
IL + G+
Sbjct: 227 CILYYMTYGK 236
|
| >3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313 | Back alignment and structure |
|---|
Score = 46.5 bits (111), Expect = 1e-05
Identities = 12/55 (21%), Positives = 23/55 (41%)
Query: 418 NNFSEENRLGRGGVGTVYKGELKDGTEVGVKRMELGSVTEQGIAQFESEITVLTK 472
+S ++G GG V++ + +K + L Q + + +EI L K
Sbjct: 28 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNK 82
|
| >1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291 | Back alignment and structure |
|---|
Score = 49.6 bits (119), Expect = 1e-06
Identities = 39/206 (18%), Positives = 67/206 (32%), Gaps = 64/206 (31%)
Query: 423 ENRLGRGGVGTVYKGELK----DGTEVGVKRMELGSVTEQGIAQ-FESEITVLTK----- 472
+LG G G V +GE V VK ++ +++ F E+ +
Sbjct: 23 LEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRN 82
Query: 473 ----------------------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG----D 506
G+L L + T A+ VA G +
Sbjct: 83 LIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGH----FLLGTLSRYAVQVAEGMGYLE 138
Query: 507 DMR--------------------VADFGLVRLVPENGKHSILTKVAGTFGY--LAPEYIV 544
R + DFGL+R +P+N H + + + APE +
Sbjct: 139 SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYV-MQEHRKVPFAWCAPESLK 197
Query: 545 TGRITAKVDVYSFGMILMDLIT-GRK 569
T + D + FG+ L ++ T G++
Sbjct: 198 TRTFSHASDTWMFGVTLWEMFTYGQE 223
|
| >3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327 | Back alignment and structure |
|---|
Score = 50.0 bits (120), Expect = 1e-06
Identities = 40/207 (19%), Positives = 69/207 (33%), Gaps = 68/207 (32%)
Query: 423 ENRLGRGGVGTVYKGELKDG-----TEVGVKRMELGSVTEQGIAQFESEITVLTK----- 472
LG G GTVYKG V +K + + + + + E V+
Sbjct: 20 IKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT-SPKANKEILDEAYVMASVDNPH 78
Query: 473 ----------------------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG----D 506
G L ++ ++ + LN + +A+G +
Sbjct: 79 VCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDN----IGSQYLLNWCVQIAKGMNYLE 134
Query: 507 DMR--------------------VADFGLVRLVPENGKHSILTKVAGT---FGYLAPEYI 543
D R + DFGL +L+ K G ++A E I
Sbjct: 135 DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE---YHAEGGKVPIKWMALESI 191
Query: 544 VTGRITAKVDVYSFGMILMDLIT-GRK 569
+ T + DV+S+G+ + +L+T G K
Sbjct: 192 LHRIYTHQSDVWSYGVTVWELMTFGSK 218
|
| >3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494 | Back alignment and structure |
|---|
Score = 50.5 bits (121), Expect = 1e-06
Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 4/62 (6%)
Query: 507 DMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT 566
+++ DFGL + + + GT Y+APE ++ + K DV+S G+IL L+
Sbjct: 177 LIKIVDFGLSAVFENQ---KKMKERLGTAYYIAPE-VLRKKYDEKCDVWSIGVILFILLA 232
Query: 567 GR 568
G
Sbjct: 233 GY 234
|
| >2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} Length = 349 | Back alignment and structure |
|---|
Score = 49.6 bits (119), Expect = 1e-06
Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 3/52 (5%)
Query: 510 VADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMIL 561
+ADFGL ++V ++ V GT GY APE + +VD++S G+I
Sbjct: 192 IADFGLSKIVEHQ---VLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIIT 240
|
| >3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332 | Back alignment and structure |
|---|
Score = 49.5 bits (118), Expect = 1e-06
Identities = 23/75 (30%), Positives = 34/75 (45%), Gaps = 12/75 (16%)
Query: 497 NIALDVARGDDMRVADFGLVRLV----------PENGKHSILTKVAGTFGYLAPEYIVTG 546
NI D ++V DFGLV + ++ T GT Y++PE I
Sbjct: 194 NIFFT--MDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLYMSPEQIHGN 251
Query: 547 RITAKVDVYSFGMIL 561
+ KVD++S G+IL
Sbjct: 252 NYSHKVDIFSLGLIL 266
|
| >3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343 | Back alignment and structure |
|---|
Score = 49.7 bits (119), Expect = 2e-06
Identities = 18/70 (25%), Positives = 29/70 (41%), Gaps = 11/70 (15%)
Query: 510 VADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIV-----------TGRITAKVDVYSFG 558
+ DFG+ + + + GT Y+ PE I +I+ K DV+S G
Sbjct: 148 LIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLG 207
Query: 559 MILMDLITGR 568
IL + G+
Sbjct: 208 CILYYMTYGK 217
|
| >3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343 | Back alignment and structure |
|---|
Score = 45.8 bits (109), Expect = 2e-05
Identities = 11/49 (22%), Positives = 21/49 (42%)
Query: 424 NRLGRGGVGTVYKGELKDGTEVGVKRMELGSVTEQGIAQFESEITVLTK 472
++G GG V++ + +K + L Q + + +EI L K
Sbjct: 15 KQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNK 63
|
| >1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A Length = 198 | Back alignment and structure |
|---|
Score = 48.1 bits (115), Expect = 2e-06
Identities = 24/145 (16%), Positives = 40/145 (27%), Gaps = 45/145 (31%)
Query: 98 QVTNIELQDQNRK-GTVPPILKKLSSMAVMYLENNQLRGPIPSLVGSLEFFSAYEANISG 156
+ +EL + L L + + L N
Sbjct: 24 EAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNN------------------------ 59
Query: 157 TIPDFIGTDTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLST----LEDLSLGHNKLT 212
I L L LG N ++ I NL LE+L + +N++
Sbjct: 60 -IEKISSLSGMENLRILSLGRNLIK------------KIENLDAVADTLEELWISYNQIA 106
Query: 213 GIFPVSSFNNHPKLTTLNLTNNLLQ 237
+ S L L ++NN +
Sbjct: 107 SL---SGIEKLVNLRVLYMSNNKIT 128
|
| >1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A Length = 198 | Back alignment and structure |
|---|
Score = 45.8 bits (109), Expect = 8e-06
Identities = 15/67 (22%), Positives = 24/67 (35%), Gaps = 9/67 (13%)
Query: 168 PQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLT 227
L L + N + ++ + I L L L + +NK+T + KL
Sbjct: 93 DTLEELWISYNQIA-SL--------SGIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLE 143
Query: 228 TLNLTNN 234
L L N
Sbjct: 144 DLLLAGN 150
|
| >3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus} Length = 229 | Back alignment and structure |
|---|
Score = 48.5 bits (116), Expect = 2e-06
Identities = 32/130 (24%), Positives = 46/130 (35%), Gaps = 33/130 (25%)
Query: 106 DQNRKGTVPP-ILKKLSSMAVMYLENNQLRGPIPSLVGSLEFFSAYEANISGTIPDFIGT 164
N+ G +P + L+ + V+ L NQL +PS V F
Sbjct: 72 GSNQLGALPVGVFDSLTQLTVLDLGTNQLTV-LPSAV-------------------F--- 108
Query: 165 DTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHP 224
D L L + N L +P L+ L L+L N+L I P +F+
Sbjct: 109 DRLVHLKELFMCCNKLT-ELPRGI-------ERLTHLTHLALDQNQLKSI-PHGAFDRLS 159
Query: 225 KLTTLNLTNN 234
LT L N
Sbjct: 160 SLTHAYLFGN 169
|
| >3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus} Length = 229 | Back alignment and structure |
|---|
Score = 44.7 bits (106), Expect = 3e-05
Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 8/73 (10%)
Query: 165 DTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHP 224
D+ L L LG+N L +P G+ +L+ L L LG N+LT + P + F+
Sbjct: 61 DSLINLKELYLGSNQLG-ALPV--GVF----DSLTQLTVLDLGTNQLTVL-PSAVFDRLV 112
Query: 225 KLTTLNLTNNLLQ 237
L L + N L
Sbjct: 113 HLKELFMCCNKLT 125
|
| >3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484 | Back alignment and structure |
|---|
Score = 49.7 bits (119), Expect = 2e-06
Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 4/62 (6%)
Query: 507 DMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT 566
++R+ DFGL + K + GT Y+APE ++ G K DV+S G+IL L++
Sbjct: 167 NIRIIDFGLSTHFEASKK---MKDKIGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLS 222
Query: 567 GR 568
G
Sbjct: 223 GC 224
|
| >2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327 | Back alignment and structure |
|---|
Score = 48.8 bits (117), Expect = 2e-06
Identities = 40/212 (18%), Positives = 64/212 (30%), Gaps = 74/212 (34%)
Query: 423 ENRLGRGGVGTVYKGELKDG------TEVGVKRMELGSVTEQGIAQFESEITVLTK---- 472
LG G G VY+G++ +V VK + +EQ F E +++K
Sbjct: 35 IRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVC-SEQDELDFLMEALIISKFNHQ 93
Query: 473 ------------------------GTLGRHLFN--WEEEGLEPLEWNTRLNIALDVARG- 505
G L L L L++A D+A G
Sbjct: 94 NIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 153
Query: 506 ------------------------DD--MRVADFGLVRLVPENGKHSILTKVAGTFGYL- 538
++ DFG+ R + G L
Sbjct: 154 QYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAS-----YYRKGGCAMLP 208
Query: 539 ----APEYIVTGRITAKVDVYSFGMILMDLIT 566
PE + G T+K D +SFG++L ++ +
Sbjct: 209 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 240
|
| >3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297 | Back alignment and structure |
|---|
Score = 48.8 bits (117), Expect = 2e-06
Identities = 41/218 (18%), Positives = 69/218 (31%), Gaps = 81/218 (37%)
Query: 423 ENRLGRGGVGTVYKGELKDG------TEVGVKRMELGSVTEQGIAQFESEITVLTK---- 472
+ LG G G V+ E + V VK ++ ++ + F+ E +LT
Sbjct: 20 KRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAAR--KDFQREAELLTNLQHE 77
Query: 473 ------------------------GTLGRHL-----------FNWEEEGLEPLEWNTRLN 497
G L + L + L + L+
Sbjct: 78 HIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLH 137
Query: 498 IALDVARG----------------------DD--MRVADFGLVRLVPENGKHSILTKVAG 533
IA +A G + +++ DFG+ R V + G
Sbjct: 138 IASQIASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYR-----VG 192
Query: 534 TFGYL-----APEYIVTGRITAKVDVYSFGMILMDLIT 566
L PE I+ + T + DV+SFG+IL ++ T
Sbjct: 193 GHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFT 230
|
| >2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434 | Back alignment and structure |
|---|
Score = 49.4 bits (118), Expect = 2e-06
Identities = 16/70 (22%), Positives = 33/70 (47%), Gaps = 9/70 (12%)
Query: 507 DMRVADFGLVRLVPEN--GKHSILTKVAGTFGYLAPEYI-------VTGRITAKVDVYSF 557
+ ++DFGL + + + L +GT G+ APE + R+T +D++S
Sbjct: 166 RILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSM 225
Query: 558 GMILMDLITG 567
G + +++
Sbjct: 226 GCVFYYILSK 235
|
| >2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} Length = 312 | Back alignment and structure |
|---|
Score = 48.8 bits (117), Expect = 2e-06
Identities = 24/93 (25%), Positives = 44/93 (47%), Gaps = 13/93 (13%)
Query: 497 NIALDVARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRIT-AKVDVY 555
NI +D+ RG ++ DFG L+ + T GT Y PE+I + V+
Sbjct: 169 NILIDLRRGC-AKLIDFGSGALLHD----EPYTDFDGTRVYSPPEWISRHQYHALPATVW 223
Query: 556 SFGMILMDLITG-------RKVVDATHSDPEYI 581
S G++L D++ G +++++A P ++
Sbjct: 224 SLGILLYDMVCGDIPFERDQEILEAELHFPAHV 256
|
| >3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318 | Back alignment and structure |
|---|
Score = 48.9 bits (117), Expect = 2e-06
Identities = 38/205 (18%), Positives = 61/205 (29%), Gaps = 69/205 (33%)
Query: 423 ENRLGRGGVGTVYKGELKD-----GTEVGVKRMELGSVTEQGIAQFESEITVLTKGTLGR 477
LG G G V G V VK ++ + Q + ++ EI +L
Sbjct: 36 IRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADA-GPQHRSGWKQEIDILRTL---Y 91
Query: 478 H--LFN----WEEEGLEP---------------------LEWNTRLNIALDVARG----- 505
H + E+ G + L A + G
Sbjct: 92 HEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQICEGMAYLH 151
Query: 506 -------------------DDMRVADFGLVRLVPENGKHSILTKVAGTFGYL-----APE 541
+++ DFGL + VPE ++ G APE
Sbjct: 152 AQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYY----RVREDGDSPVFWYAPE 207
Query: 542 YIVTGRITAKVDVYSFGMILMDLIT 566
+ + DV+SFG+ L +L+T
Sbjct: 208 CLKEYKFYYASDVWSFGVTLYELLT 232
|
| >2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A Length = 304 | Back alignment and structure |
|---|
Score = 48.7 bits (117), Expect = 3e-06
Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 4/52 (7%)
Query: 510 VADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMIL 561
+ DFGL ++ I++ GT GY+APE + + VD +S G+I
Sbjct: 150 ITDFGLSKMEQNG----IMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIT 197
|
| >3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* Length = 464 | Back alignment and structure |
|---|
Score = 49.1 bits (117), Expect = 3e-06
Identities = 17/62 (27%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
Query: 507 DMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT 566
+++ DFGL R + ++T T Y APE I+ VD++S G I+ +++
Sbjct: 202 TLKILDFGLARTAGTSF---MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVR 258
Query: 567 GR 568
+
Sbjct: 259 HK 260
|
| >3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371 | Back alignment and structure |
|---|
Score = 48.9 bits (116), Expect = 3e-06
Identities = 11/76 (14%), Positives = 24/76 (31%), Gaps = 13/76 (17%)
Query: 497 NIALDVARGDDMRV--ADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIV--TGRITAKV 552
N+ + D R+ D + V G + Y E++ T T +
Sbjct: 224 NLFIM----PDGRLMLGDVSALWKVGTRG-----PASSVPVTYAPREFLNASTATFTHAL 274
Query: 553 DVYSFGMILMDLITGR 568
+ + G+ + +
Sbjct: 275 NAWQLGLSIYRVWCLF 290
|
| >2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... Length = 371 | Back alignment and structure |
|---|
Score = 48.9 bits (117), Expect = 3e-06
Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
Query: 507 DMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT 566
+++ DFGL R + ++T T Y APE I+ VD++S G I+ ++I
Sbjct: 165 TLKILDFGLARTAGTSF---MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIK 221
Query: 567 GR 568
G
Sbjct: 222 GG 223
|
| >1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333 | Back alignment and structure |
|---|
Score = 48.9 bits (117), Expect = 3e-06
Identities = 44/209 (21%), Positives = 75/209 (35%), Gaps = 70/209 (33%)
Query: 423 ENRLGRGGVGTVYKGELKDGTE-----VGVKRMELGSVTEQGIAQFESEITVLTK----- 472
+ +G G G VYKG LK + V +K ++ G TE+ F E ++ +
Sbjct: 49 QKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGY-TEKQRVDFLGEAGIMGQFSHHN 107
Query: 473 -----------------------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARGDDMR 509
G L + L + E + + +A G M+
Sbjct: 108 IIRLEGVISKYKPMMIITEYMENGALDKFLREKDGE----FSVLQLVGMLRGIAAG--MK 161
Query: 510 --------------------------VADFGLVRLVPENGKHSILTKVAGTFGY--LAPE 541
V+DFGL R++ E+ + T G APE
Sbjct: 162 YLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVL-EDDPEATYTTSGGKIPIRWTAPE 220
Query: 542 YIVTGRITAKVDVYSFGMILMDLIT-GRK 569
I + T+ DV+SFG+++ +++T G +
Sbjct: 221 AISYRKFTSASDVWSFGIVMWEVMTYGER 249
|
| >3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486 | Back alignment and structure |
|---|
Score = 49.3 bits (118), Expect = 3e-06
Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 4/62 (6%)
Query: 507 DMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT 566
D+++ DFGL +N K + GT Y+APE ++ G K DV+S G+IL L++
Sbjct: 162 DIKIIDFGLSTCFQQNTK---MKDRIGTAYYIAPE-VLRGTYDEKCDVWSAGVILYILLS 217
Query: 567 GR 568
G
Sbjct: 218 GT 219
|
| >2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390 | Back alignment and structure |
|---|
Score = 48.7 bits (116), Expect = 3e-06
Identities = 17/70 (24%), Positives = 28/70 (40%), Gaps = 11/70 (15%)
Query: 510 VADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIV-----------TGRITAKVDVYSFG 558
+ DFG+ + + + G Y+ PE I +I+ K DV+S G
Sbjct: 195 LIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLG 254
Query: 559 MILMDLITGR 568
IL + G+
Sbjct: 255 CILYYMTYGK 264
|
| >2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390 | Back alignment and structure |
|---|
Score = 46.3 bits (110), Expect = 2e-05
Identities = 12/55 (21%), Positives = 23/55 (41%)
Query: 418 NNFSEENRLGRGGVGTVYKGELKDGTEVGVKRMELGSVTEQGIAQFESEITVLTK 472
+S ++G GG V++ + +K + L Q + + +EI L K
Sbjct: 56 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNK 110
|
| >1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303 | Back alignment and structure |
|---|
Score = 48.5 bits (116), Expect = 3e-06
Identities = 25/84 (29%), Positives = 38/84 (45%), Gaps = 15/84 (17%)
Query: 497 NIALDVARGDDMRVADFGLVRLV------------PENGKHSILTKVAGTFGYLAPEYIV 544
NI +D ++++ DFGL + V G LT GT Y+A E +
Sbjct: 146 NIFID--ESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLD 203
Query: 545 -TGRITAKVDVYSFGMILMDLITG 567
TG K+D+YS G+I ++I
Sbjct: 204 GTGHYNEKIDMYSLGIIFFEMIYP 227
|
| >3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365 | Back alignment and structure |
|---|
Score = 48.8 bits (116), Expect = 3e-06
Identities = 10/61 (16%), Positives = 24/61 (39%), Gaps = 2/61 (3%)
Query: 509 RVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRI-TAKVDVYSFGMILMDLITG 567
+ D G + K +I T T G+ E +++ + ++D + + ++ G
Sbjct: 223 ALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVE-MLSNKPWNYQIDYFGVAATVYCMLFG 281
Query: 568 R 568
Sbjct: 282 T 282
|
| >1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322 | Back alignment and structure |
|---|
Score = 48.4 bits (116), Expect = 3e-06
Identities = 42/211 (19%), Positives = 74/211 (35%), Gaps = 74/211 (35%)
Query: 424 NRLGRGGVGTVYKGELKDG------TEVGVKRMELGSVTEQGIAQFESEITVLTK----- 472
LG+G G VY+G K T V +K + + + + +F +E +V+ +
Sbjct: 31 RELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAA-SMRERIEFLNEASVMKEFNCHH 89
Query: 473 -----------------------GTLGRHL-----FNWEEEGLEPLEWNTRLNIALDVAR 504
G L +L L P + + +A ++A
Sbjct: 90 VVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIAD 149
Query: 505 G----------------------DD--MRVADFGLVRLVPENGKHSILTKVAGTFGYL-- 538
G +D +++ DFG+ R + E + G G L
Sbjct: 150 GMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYY-----RKGGKGLLPV 204
Query: 539 ---APEYIVTGRITAKVDVYSFGMILMDLIT 566
+PE + G T DV+SFG++L ++ T
Sbjct: 205 RWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 235
|
| >3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A Length = 272 | Back alignment and structure |
|---|
Score = 48.1 bits (115), Expect = 3e-06
Identities = 37/156 (23%), Positives = 64/156 (41%), Gaps = 37/156 (23%)
Query: 98 QVTNIELQDQNRKGTVPP-ILKKLSSMAVMYLENNQLRGPIPSLVGSLEFFSAYEANISG 156
+T + L N+ ++P + KL+++ + L NQL+
Sbjct: 86 NLTYLILTG-NQLQSLPNGVFDKLTNLKELVLVENQLQ---------------------- 122
Query: 157 TIPDFIGTDTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFP 216
++PD + D L+YL+L +N LQ F L+ L +L L +N+L + P
Sbjct: 123 SLPDGV-FDKLTNLTYLNLAHNQLQSLPKGVF-------DKLTNLTELDLSYNQLQSL-P 173
Query: 217 VSSFNNHPKLTTLNLTNNLLQGPTPR--FNN-SKLT 249
F+ +L L L N L+ P F+ + L
Sbjct: 174 EGVFDKLTQLKDLRLYQNQLKS-VPDGVFDRLTSLQ 208
|
| >3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A Length = 272 | Back alignment and structure |
|---|
Score = 46.5 bits (111), Expect = 9e-06
Identities = 25/145 (17%), Positives = 42/145 (28%), Gaps = 39/145 (26%)
Query: 93 CSDDGQVTNIELQDQNRKGTVPPILKKLSSMAVMYLENNQLRGPIPSLVGSLEFFSAYEA 152
+ L+ + +L+S+ + N+ ++
Sbjct: 17 AFAET--IKANLK-KKSVTDAVTQ-NELNSIDQIIANNSDIK------------------ 54
Query: 153 NISGTIPDFIGTDTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLT 212
++ P + YL LG N L L+ L L L N+L
Sbjct: 55 ----SVQGI---QYLPNVRYLALGGNKLH-----DISA-L---KELTNLTYLILTGNQLQ 98
Query: 213 GIFPVSSFNNHPKLTTLNLTNNLLQ 237
+ P F+ L L L N LQ
Sbjct: 99 SL-PNGVFDKLTNLKELVLVENQLQ 122
|
| >3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A Length = 272 | Back alignment and structure |
|---|
Score = 46.2 bits (110), Expect = 2e-05
Identities = 35/138 (25%), Positives = 60/138 (43%), Gaps = 33/138 (23%)
Query: 98 QVTNIELQDQNRKGTVPP-ILKKLSSMAVMYLENNQLRGPIPSLVGSLEFFSAYEANISG 156
+ + L + N+ ++P + KL+++ + L +NQL+ +P V
Sbjct: 110 NLKELVLVE-NQLQSLPDGVFDKLTNLTYLNLAHNQLQS-LPKGV--------------- 152
Query: 157 TIPDFIGTDTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFP 216
F D L+ LDL N LQ ++P G+ F L+ L+DL L N+L + P
Sbjct: 153 ----F---DKLTNLTELDLSYNQLQ-SLPE--GV-F---DKLTQLKDLRLYQNQLKSV-P 197
Query: 217 VSSFNNHPKLTTLNLTNN 234
F+ L + L +N
Sbjct: 198 DGVFDRLTSLQYIWLHDN 215
|
| >1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278 | Back alignment and structure |
|---|
Score = 48.0 bits (115), Expect = 3e-06
Identities = 42/204 (20%), Positives = 75/204 (36%), Gaps = 73/204 (35%)
Query: 423 ENRLGRGGVGTVYKGELKDGTEVGVKRMELGSVTEQGIAQFESEITVLTK---------- 472
+G+G G V G+ + G +V VK ++ + + F +E +V+T+
Sbjct: 26 LQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDATAQA----FLAEASVMTQLRHSNLVQLL 80
Query: 473 -------------------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG-------- 505
G+L +L G L + L +LDV
Sbjct: 81 GVIVEEKGGLYIVTEYMAKGSLVDYL---RSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN 137
Query: 506 ----------------DDMRVADFGLVRLV---PENGKHSILTKVAGTFGYLAPEYIVTG 546
+ +V+DFGL + + GK + K + APE +
Sbjct: 138 FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPV--K------WTAPEALREK 189
Query: 547 RITAKVDVYSFGMILMDLIT-GRK 569
+ + K DV+SFG++L ++ + GR
Sbjct: 190 KFSTKSDVWSFGILLWEIYSFGRV 213
|
| >1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313 | Back alignment and structure |
|---|
Score = 48.4 bits (116), Expect = 4e-06
Identities = 41/228 (17%), Positives = 63/228 (27%), Gaps = 87/228 (38%)
Query: 418 NNFSEENRLGRGGVGTVYKGELKD------GTEVGVKRMELGSVTEQGIAQFESEITVLT 471
N S LG G G V + V VK ++ + SE+ VL+
Sbjct: 23 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSA-HLTEREALMSELKVLS 81
Query: 472 KGTLGRH--------------------------------------------LFNWEEEGL 487
LG H E+
Sbjct: 82 Y--LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDE 139
Query: 488 EPLEWNTRLNIALDVARG----------------------DD--MRVADFGLVRLVPENG 523
L+ L+ + VA+G ++ DFGL R + +
Sbjct: 140 LALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDS 199
Query: 524 KHSILTKVAGTFGYL-----APEYIVTGRITAKVDVYSFGMILMDLIT 566
+ V L APE I T + DV+S+G+ L +L +
Sbjct: 200 NY-----VVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 242
|
| >2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373 | Back alignment and structure |
|---|
Score = 48.5 bits (116), Expect = 4e-06
Identities = 40/206 (19%), Positives = 73/206 (35%), Gaps = 65/206 (31%)
Query: 423 ENRLGRGGVGTVYKGELK----DGTEVGVKRMELGSVTEQGIAQFESEITVLTK------ 472
+ +G G G V G LK V +K +++G TE+ F E +++ +
Sbjct: 50 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGY-TEKQRRDFLGEASIMGQFDHPNI 108
Query: 473 ----------------------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG----D 506
G+L L + + + +A G
Sbjct: 109 IRLEGVVTKSKPVMIVTEYMENGSLDSFL----RKHDAQFTVIQLVGMLRGIASGMKYLS 164
Query: 507 DMR--------------------VADFGLVRLVPENGKHSILTKVAGTFGYL--APEYIV 544
DM V+DFGL R++ E+ + T G +PE I
Sbjct: 165 DMGYVHRDLAARNILINSNLVCKVSDFGLGRVL-EDDPEAAYTTRGGKIPIRWTSPEAIA 223
Query: 545 TGRITAKVDVYSFGMILMDLIT-GRK 569
+ T+ DV+S+G++L ++++ G +
Sbjct: 224 YRKFTSASDVWSYGIVLWEVMSYGER 249
|
| >3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377 | Back alignment and structure |
|---|
Score = 48.5 bits (115), Expect = 4e-06
Identities = 17/131 (12%), Positives = 33/131 (25%), Gaps = 42/131 (32%)
Query: 473 GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG----------------------DDMRV 510
T G L + + L + RL + L V R V
Sbjct: 187 QTFGEVLLSHSSTH-KSLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVLDQRGGV 245
Query: 511 --ADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVT-----------GRITAKVDVYSF 557
F + + + + G+ PE +T D ++
Sbjct: 246 FLTGFEHLV------RDGARVVSSVSRGFEPPELEARRATISYHRDRRTLMTFSFDAWAL 299
Query: 558 GMILMDLITGR 568
G+++ +
Sbjct: 300 GLVIYWIWCAD 310
|
| >1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450 | Back alignment and structure |
|---|
Score = 48.5 bits (116), Expect = 4e-06
Identities = 39/199 (19%), Positives = 71/199 (35%), Gaps = 70/199 (35%)
Query: 423 ENRLGRGGVGTVYKGELKDGTEVGVKRMELGSVTEQGIAQFESEITVLTK---------- 472
+G+G G V G+ + G +V VK ++ + + F +E +V+T+
Sbjct: 198 LQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDATAQA----FLAEASVMTQLRHSNLVQLL 252
Query: 473 -------------------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG-------- 505
G+L +L G L + L +LDV
Sbjct: 253 GVIVEEKGGLYIVTEYMAKGSLVDYL---RSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN 309
Query: 506 ----------------DDMRVADFGLVRLVPENGKHSILTKVAGTFGY--LAPEYIVTGR 547
+ +V+DFGL + + T+ G APE + +
Sbjct: 310 FVHRDLAARNVLVSEDNVAKVSDFGLTK-------EASSTQDTGKLPVKWTAPEALREKK 362
Query: 548 ITAKVDVYSFGMILMDLIT 566
+ K DV+SFG++L ++ +
Sbjct: 363 FSTKSDVWSFGILLWEIYS 381
|
| >2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Length = 333 | Back alignment and structure |
|---|
Score = 48.0 bits (115), Expect = 4e-06
Identities = 33/219 (15%), Positives = 61/219 (27%), Gaps = 83/219 (37%)
Query: 423 ENRLGRGGVGTVYKGELKD------GTEVGVKRMELGSVTEQGIAQFESEITVLTKGTLG 476
LG G G V + +V VK ++ + SE+ +++ LG
Sbjct: 51 GKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTA-HADEKEALMSELKIMSH--LG 107
Query: 477 RHL----------------------------------------FNWEEEGLEPLEWNTRL 496
+H L
Sbjct: 108 QHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLL 167
Query: 497 NIALDVARG----------------------DD--MRVADFGLVRLVPENGKHSILTKVA 532
+ + VA+G + ++ DFGL R + + + +
Sbjct: 168 HFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNY-----IV 222
Query: 533 GTFGYL-----APEYIVTGRITAKVDVYSFGMILMDLIT 566
L APE I T + DV+S+G++L ++ +
Sbjct: 223 KGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
|
| >3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367 | Back alignment and structure |
|---|
Score = 48.2 bits (115), Expect = 4e-06
Identities = 41/212 (19%), Positives = 66/212 (31%), Gaps = 74/212 (34%)
Query: 423 ENRLGRGGVGTVYKGELKDG------TEVGVKRMELGSVTEQGIAQFESEITVLTK---- 472
LG G G VY+G++ +V VK + +EQ F E +++K
Sbjct: 76 IRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVC-SEQDELDFLMEALIISKFNHQ 134
Query: 473 ------------------------GTLGRHLFNWEEEGLEPLEWNTR--LNIALDVARG- 505
G L L +P L++A D+A G
Sbjct: 135 NIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 194
Query: 506 ------------------------DD--MRVADFGLVRLVPENGKHSILTKVAGTFGYL- 538
++ DFG+ R + G G L
Sbjct: 195 QYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAG-----YYRKGGCAMLP 249
Query: 539 ----APEYIVTGRITAKVDVYSFGMILMDLIT 566
PE + G T+K D +SFG++L ++ +
Sbjct: 250 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 281
|
| >3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277 | Back alignment and structure |
|---|
Score = 48.0 bits (115), Expect = 4e-06
Identities = 12/55 (21%), Positives = 27/55 (49%), Gaps = 4/55 (7%)
Query: 507 DMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMIL 561
+++ DFGL ++ GT Y++P+ ++ G + D +S G+++
Sbjct: 147 PLKLIDFGLAARFKPG---KMMRTKVGTPYYVSPQ-VLEGLYGPECDEWSAGVMM 197
|
| >4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350 | Back alignment and structure |
|---|
Score = 48.2 bits (115), Expect = 5e-06
Identities = 33/203 (16%), Positives = 73/203 (35%), Gaps = 56/203 (27%)
Query: 418 NNFSEENRLGRGGVGTVYKGE-LKDGTEVGVKRMELGSVTEQGIAQFESEITVLTK---- 472
+ ++G G G + +DG + +K + + ++ + + E+ VL
Sbjct: 24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHP 83
Query: 473 ------------------------GTLGRHL-----FNWEEEGLEPLEWNTRLNIALD-- 501
G L + + ++E+ + L+W ++ +AL
Sbjct: 84 NIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQI--LDWFVQICLALKHV 141
Query: 502 ----------------VARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVT 545
+ + +++ DFG+ R++ N + GT YL+PE
Sbjct: 142 HDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVL--NSTVELARACIGTPYYLSPEICEN 199
Query: 546 GRITAKVDVYSFGMILMDLITGR 568
K D+++ G +L +L T +
Sbjct: 200 KPYNNKSDIWALGCVLYELCTLK 222
|
| >3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... Length = 320 | Back alignment and structure |
|---|
Score = 48.1 bits (115), Expect = 5e-06
Identities = 23/93 (24%), Positives = 44/93 (47%), Gaps = 13/93 (13%)
Query: 497 NIALDVARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITA-KVDVY 555
NI +D+ RG+ +++ DFG L+ + ++ T GT Y PE+I R V+
Sbjct: 179 NILIDLNRGE-LKLIDFGSGALLKD----TVYTDFDGTRVYSPPEWIRYHRYHGRSAAVW 233
Query: 556 SFGMILMDLITG-------RKVVDATHSDPEYI 581
S G++L D++ G +++ + +
Sbjct: 234 SLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRV 266
|
| >3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285 | Back alignment and structure |
|---|
Score = 47.6 bits (114), Expect = 5e-06
Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 4/55 (7%)
Query: 507 DMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMIL 561
+++ DFGL L + T AGT Y+APE + +T K D++S G+++
Sbjct: 165 PIKIIDFGLAELFKSD---EHSTNAAGTALYMAPE-VFKRDVTFKCDIWSAGVVM 215
|
| >1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281 | Back alignment and structure |
|---|
Score = 47.6 bits (114), Expect = 5e-06
Identities = 35/210 (16%), Positives = 66/210 (31%), Gaps = 76/210 (36%)
Query: 423 ENRLGRGGVGTVYKGELKDG----TEVGVKRMELGSVTEQGIAQFESEITVLTK------ 472
+G G G V++G V +K + + ++ +F E + +
Sbjct: 20 GRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCT-SDSVREKFLQEALTMRQFDHPHI 78
Query: 473 ---------------------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG----DD 507
G L L + L+ + + A ++ +
Sbjct: 79 VKLIGVITENPVWIIMELCTLGELRSFLQVRKYS----LDLASLILYAYQLSTALAYLES 134
Query: 508 MR--------------------VADFGLVRLVPEN-------GKHSILTKVAGTFGYLAP 540
R + DFGL R + ++ GK I ++AP
Sbjct: 135 KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK--------WMAP 186
Query: 541 EYIVTGRITAKVDVYSFGMILMDLIT-GRK 569
E I R T+ DV+ FG+ + +++ G K
Sbjct: 187 ESINFRRFTSASDVWMFGVCMWEILMHGVK 216
|
| >2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri} Length = 177 | Back alignment and structure |
|---|
Score = 46.5 bits (111), Expect = 5e-06
Identities = 25/87 (28%), Positives = 34/87 (39%), Gaps = 10/87 (11%)
Query: 165 DTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHP 224
D QL+ L L N +Q F L+ L L L NKL + P F+
Sbjct: 49 DKLTQLTKLSLSQNQIQSLPDGVF-------DKLTKLTILYLHENKLQSL-PNGVFDKLT 100
Query: 225 KLTTLNLTNNLLQG-PTPRFNN-SKLT 249
+L L L N L+ P F+ + L
Sbjct: 101 QLKELALDTNQLKSVPDGIFDRLTSLQ 127
|
| >2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri} Length = 177 | Back alignment and structure |
|---|
Score = 44.2 bits (105), Expect = 3e-05
Identities = 34/136 (25%), Positives = 60/136 (44%), Gaps = 33/136 (24%)
Query: 100 TNIELQDQNRKGTVPP-ILKKLSSMAVMYLENNQLRGPIPSLVGSLEFFSAYEANISGTI 158
T +EL+ N+ ++P + KL+ + + L NQ++ +P V
Sbjct: 31 TRLELES-NKLQSLPHGVFDKLTQLTKLSLSQNQIQS-LPDGV----------------- 71
Query: 159 PDFIGTDTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVS 218
F D +L+ L L N LQ ++P+ G+ F L+ L++L+L N+L + P
Sbjct: 72 --F---DKLTKLTILYLHENKLQ-SLPN--GV-F---DKLTQLKELALDTNQLKSV-PDG 118
Query: 219 SFNNHPKLTTLNLTNN 234
F+ L + L N
Sbjct: 119 IFDRLTSLQKIWLHTN 134
|
| >3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325 | Back alignment and structure |
|---|
Score = 48.1 bits (115), Expect = 5e-06
Identities = 40/208 (19%), Positives = 71/208 (34%), Gaps = 69/208 (33%)
Query: 423 ENRLGRGGVGTVYKGELKDG----TEVGVKRMELGSVTEQGIAQFESEITVLTK------ 472
E +G G G V G L+ V +K ++ G TE+ F SE +++ +
Sbjct: 54 EKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGY-TERQRRDFLSEASIMGQFDHPNI 112
Query: 473 ----------------------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARGDDMR- 509
G+L L + + + + V G MR
Sbjct: 113 IRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQ----FTIMQLVGMLRGVGAG--MRY 166
Query: 510 -------------------------VADFGLVRLVPENGKHSILTKVAGTFGYL--APEY 542
V+DFGL R++ ++ + T G APE
Sbjct: 167 LSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDD-PDAAYTTTGGKIPIRWTAPEA 225
Query: 543 IVTGRITAKVDVYSFGMILMDLIT-GRK 569
I ++ DV+SFG+++ +++ G +
Sbjct: 226 IAFRTFSSASDVWSFGVVMWEVLAYGER 253
|
| >2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279 | Back alignment and structure |
|---|
Score = 47.6 bits (114), Expect = 5e-06
Identities = 40/211 (18%), Positives = 68/211 (32%), Gaps = 63/211 (29%)
Query: 418 NNFSEENRLGRGGVGTVYKGE-LKDGTEVGVKRMELGSVTEQGIAQFESEITVLTK---- 472
++ +G G G K DG + K ++ GS+TE SE+ +L +
Sbjct: 6 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHP 65
Query: 473 --------------------------GTLGRHLFNWEEEGL-----EPLEWNTRLNIALD 501
G L + +E L T+L +AL
Sbjct: 66 NIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALK 125
Query: 502 -----------------------VARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYL 538
+ ++++ DFGL R++ N S GT Y+
Sbjct: 126 ECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARIL--NHDTSFAKTFVGTPYYM 183
Query: 539 APEYIVTGRI-TAKVDVYSFGMILMDLITGR 568
+PE + K D++S G +L +L
Sbjct: 184 SPE-QMNRMSYNEKSDIWSLGCLLYELCALM 213
|
| >2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287 | Back alignment and structure |
|---|
Score = 47.6 bits (114), Expect = 5e-06
Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 4/55 (7%)
Query: 507 DMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMIL 561
D+++ DFGL +N + + GT Y+APE ++ G K DV+S G+IL
Sbjct: 162 DIKIIDFGLSTCFQQN---TKMKDRIGTAYYIAPE-VLRGTYDEKCDVWSAGVIL 212
|
| >3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345 | Back alignment and structure |
|---|
Score = 47.9 bits (114), Expect = 6e-06
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
Query: 497 NIALDVARGDDMRVADFGLVRLVP--ENGKHSILTKVAGTFGYLAPEYIVTG--RITAKV 552
N + ++++ DFGL + NG++ +T AGT ++APE + T K
Sbjct: 198 NFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKC 257
Query: 553 DVYSFGMILMDLITGR 568
D +S G++L L+ G
Sbjct: 258 DAWSAGVLLHLLLMGA 273
|
| >3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} Length = 444 | Back alignment and structure |
|---|
Score = 48.1 bits (115), Expect = 6e-06
Identities = 19/53 (35%), Positives = 28/53 (52%), Gaps = 4/53 (7%)
Query: 510 VADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRI-TAKVDVYSFGMIL 561
+ADFGL V + AGT GYL+PE ++ VD+++ G+IL
Sbjct: 154 LADFGLAIEVEGEQQ--AWFGFAGTPGYLSPE-VLRKDPYGKPVDLWACGVIL 203
|
| >3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413 | Back alignment and structure |
|---|
Score = 47.7 bits (113), Expect = 7e-06
Identities = 17/130 (13%), Positives = 30/130 (23%), Gaps = 41/130 (31%)
Query: 473 GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG----------------------DDMRV 510
T G L + + L + RL + L V R V
Sbjct: 192 QTFGEVLLSHSSTH-KSLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVLDQRGGV 250
Query: 511 --ADFGLVRLVPENGKHSILTKVAGTFGYLAPEYI----------VTGRITAKVDVYSFG 558
F + + G+ PE +T D ++ G
Sbjct: 251 FLTGFEHLVRDGAS------AVSPIGRGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLG 304
Query: 559 MILMDLITGR 568
+ + +
Sbjct: 305 LAIYWIWCAD 314
|
| >1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387 | Back alignment and structure |
|---|
Score = 47.8 bits (114), Expect = 7e-06
Identities = 14/71 (19%), Positives = 32/71 (45%), Gaps = 3/71 (4%)
Query: 497 NIALDVARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYS 556
NI + + +++ DFGL + + + T + APE + + D+++
Sbjct: 179 NIMCETKKASSVKIIDFGLATKLNPDEI---VKVTTATAEFAAPEIVDREPVGFYTDMWA 235
Query: 557 FGMILMDLITG 567
G++ L++G
Sbjct: 236 IGVLGYVLLSG 246
|
| >3pvu_A Beta-adrenergic receptor kinase 1; transferase, serine/threonine-protein kinase, ATP-binding, I membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A* 3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A* 1bak_A Length = 695 | Back alignment and structure |
|---|
Score = 48.0 bits (114), Expect = 7e-06
Identities = 24/73 (32%), Positives = 35/73 (47%), Gaps = 7/73 (9%)
Query: 497 NIALDVARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTG-RITAKVDVY 555
NI LD G +R++D GL + H+ GT GY+APE + G + D +
Sbjct: 322 NILLD-EHGH-VRISDLGLACDFSKKKPHAS----VGTHGYMAPEVLQKGVAYDSSADWF 375
Query: 556 SFGMILMDLITGR 568
S G +L L+ G
Sbjct: 376 SLGCMLFKLLRGH 388
|
| >3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281 | Back alignment and structure |
|---|
Score = 46.8 bits (112), Expect = 9e-06
Identities = 39/208 (18%), Positives = 67/208 (32%), Gaps = 72/208 (34%)
Query: 423 ENRLGRGGVGTVYKGELKDG----TEVGVKRMELGSVTEQGIAQFESEITVLTK------ 472
LG G G VY+G + V VK + T +F SE ++
Sbjct: 17 NRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDC-TLDNKEKFMSEAVIMKNLDHPHI 75
Query: 473 ---------------------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARGDDMR-- 509
G LG +L E L+ T + +L + + M
Sbjct: 76 VKLIGIIEEEPTWIIMELYPYGELGHYL----ERNKNSLKVLTLVLYSLQICKA--MAYL 129
Query: 510 ------------------------VADFGLVRLVPENGKHSILTKVAGT---FGYLAPEY 542
+ DFGL R + + K + T +++PE
Sbjct: 130 ESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDE----DYYKASVTRLPIKWMSPES 185
Query: 543 IVTGRITAKVDVYSFGMILMDLIT-GRK 569
I R T DV+ F + + ++++ G++
Sbjct: 186 INFRRFTTASDVWMFAVCMWEILSFGKQ 213
|
| >2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284 | Back alignment and structure |
|---|
Score = 46.8 bits (112), Expect = 9e-06
Identities = 18/73 (24%), Positives = 36/73 (49%), Gaps = 8/73 (10%)
Query: 497 NIALDVARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRI-TAKVDVY 555
N+ + ++++ADFG P + ++ GT YL PE ++ G+ KVD++
Sbjct: 144 NLLMG--YKGELKIADFGWSVHAPSLRRRTM----CGTLDYLPPE-MIEGKTHDEKVDLW 196
Query: 556 SFGMILMDLITGR 568
G++ + + G
Sbjct: 197 CAGVLCYEFLVGM 209
|
| >2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656 | Back alignment and structure |
|---|
Score = 47.2 bits (112), Expect = 1e-05
Identities = 36/210 (17%), Positives = 67/210 (31%), Gaps = 76/210 (36%)
Query: 423 ENRLGRGGVGTVYKGELKDG----TEVGVKRMELGSVTEQGIAQFESEITVL-------- 470
+G G G V++G V +K + + ++ +F E +
Sbjct: 395 GRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCT-SDSVREKFLQEALTMRQFDHPHI 453
Query: 471 -------------------TKGTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------ 505
T G L L + L+ + + A ++
Sbjct: 454 VKLIGVITENPVWIIMELCTLGELRSFL----QVRKFSLDLASLILYAYQLSTALAYLES 509
Query: 506 ------------------DDMRVADFGLVRLVPEN-------GKHSILTKVAGTFGYLAP 540
D +++ DFGL R + ++ GK I ++AP
Sbjct: 510 KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK--------WMAP 561
Query: 541 EYIVTGRITAKVDVYSFGMILMDLIT-GRK 569
E I R T+ DV+ FG+ + +++ G K
Sbjct: 562 ESINFRRFTSASDVWMFGVCMWEILMHGVK 591
|
| >2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284 | Back alignment and structure |
|---|
Score = 46.1 bits (110), Expect = 1e-05
Identities = 24/73 (32%), Positives = 39/73 (53%), Gaps = 5/73 (6%)
Query: 497 NIALDVARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYS 556
NI L +++ DFGLV + +GK T+ GT Y++PE I + +VD+Y+
Sbjct: 152 NIFLV--DTKQVKIGDFGLVTSLKNDGKR---TRSKGTLRYMSPEQISSQDYGKEVDLYA 206
Query: 557 FGMILMDLITGRK 569
G+IL +L+
Sbjct: 207 LGLILAELLHVCD 219
|
| >4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336 | Back alignment and structure |
|---|
Score = 46.7 bits (111), Expect = 1e-05
Identities = 45/210 (21%), Positives = 76/210 (36%), Gaps = 65/210 (30%)
Query: 414 RNATNNFSEENRLGRGGVGTVYKG-ELKDGTEVGVKRMEL-------------------- 452
R + + + R+GRG G V++ + + G + VK++ L
Sbjct: 54 REEVHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRVEELVACAGLSSPRIV 113
Query: 453 ---GSVTEQG-------------IAQF--------ESEITVLTKGTLGRHLFNWEEEGLE 488
G+V E + Q E L EGLE
Sbjct: 114 PLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQAL---------EGLE 164
Query: 489 PLEWNTRL-------NIALDVARGDDMRVADFGL-VRLVPENGKHSILTK--VAGTFGYL 538
L L N+ L + G + DFG + L P+ S+LT + GT ++
Sbjct: 165 YLHTRRILHGDVKADNVLLS-SDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHM 223
Query: 539 APEYIVTGRITAKVDVYSFGMILMDLITGR 568
APE ++ AKVD++S +++ ++ G
Sbjct: 224 APEVVMGKPCDAKVDIWSSCCMMLHMLNGC 253
|
| >2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} Length = 298 | Back alignment and structure |
|---|
Score = 46.1 bits (110), Expect = 1e-05
Identities = 18/75 (24%), Positives = 36/75 (48%), Gaps = 7/75 (9%)
Query: 497 NIALDVARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRIT---AKVD 553
N+ + +++ADFG+ G ++L+ GT ++APE + R +D
Sbjct: 167 NLLVG--EDGHIKIADFGVSNEF--KGSDALLSNTVGTPAFMAPESLSETRKIFSGKALD 222
Query: 554 VYSFGMILMDLITGR 568
V++ G+ L + G+
Sbjct: 223 VWAMGVTLYCFVFGQ 237
|
| >4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329 | Back alignment and structure |
|---|
Score = 46.5 bits (111), Expect = 1e-05
Identities = 42/217 (19%), Positives = 67/217 (30%), Gaps = 80/217 (36%)
Query: 423 ENRLGRGGVGTVYKGELKDG------TEVGVKRMELGSVTEQGIAQFESEITVLTK---- 472
+ LG G G V+ E + V VK L +E F+ E +LT
Sbjct: 46 KWELGEGAFGKVFLAECHNLLPEQDKMLVAVKA--LKEASESARQDFQREAELLTMLQHQ 103
Query: 473 ------------------------GTL----------GRHLFNWEEEGLEPLEWNTRLNI 498
G L + L E+ PL L +
Sbjct: 104 HIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAV 163
Query: 499 ALDVARG----------------------DD--MRVADFGLVRLVPENGKHSILTKVAGT 534
A VA G +++ DFG+ R + + + +
Sbjct: 164 ASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGR---- 219
Query: 535 FGYL-----APEYIVTGRITAKVDVYSFGMILMDLIT 566
L PE I+ + T + DV+SFG++L ++ T
Sbjct: 220 -TMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFT 255
|
| >2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348 | Back alignment and structure |
|---|
Score = 46.6 bits (111), Expect = 2e-05
Identities = 17/75 (22%), Positives = 35/75 (46%), Gaps = 10/75 (13%)
Query: 497 NIALDVARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRIT---AKVD 553
NI +D + ++++DFG + + + GT+ ++ PE + + AKVD
Sbjct: 182 NILMD--KNGRVKLSDFGESEYMVDK----KIKGSRGTYEFMPPE-FFSNESSYNGAKVD 234
Query: 554 VYSFGMILMDLITGR 568
++S G+ L +
Sbjct: 235 IWSLGICLYVMFYNV 249
|
| >2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} Length = 320 | Back alignment and structure |
|---|
Score = 46.1 bits (110), Expect = 2e-05
Identities = 17/74 (22%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 497 NIALDVARGDDMRVADFGLVRLV-PENGKHSILTKVAGTFGYLAPEYIVTGRI-TAKVDV 554
N+ ++ +++ DFGL R++ P L++ T Y +P +++ T +D+
Sbjct: 150 NLFIN-TEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDM 208
Query: 555 YSFGMILMDLITGR 568
++ G I +++TG+
Sbjct: 209 WAAGCIFAEMLTGK 222
|
| >3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase, neurotrophic tyrosine kinase, receptor-related NTRKR2; 2.90A {Homo sapiens} Length = 289 | Back alignment and structure |
|---|
Score = 46.0 bits (110), Expect = 2e-05
Identities = 35/218 (16%), Positives = 65/218 (29%), Gaps = 80/218 (36%)
Query: 423 ENRLGRGGVGTVYKGELKDG------TEVGVKRMELGSVTEQGIAQFESEITVLTK---- 472
LG G VYKG L V +K ++ + +F E + +
Sbjct: 14 MEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKA-EGPLREEFRHEAMLRARLQHP 72
Query: 473 ------------------------GTLGRHL-----------FNWEEEGLEPLEWNTRLN 497
G L L + + LE ++
Sbjct: 73 NVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVH 132
Query: 498 IALDVARG----------------------DD--MRVADFGLVRLVPENGKHSILTKVAG 533
+ +A G D ++++D GL R V ++
Sbjct: 133 LVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFREV-----YAADYYKLL 187
Query: 534 TFGYL-----APEYIVTGRITAKVDVYSFGMILMDLIT 566
L APE I+ G+ + D++S+G++L ++ +
Sbjct: 188 GNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 225
|
| >3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279 | Back alignment and structure |
|---|
Score = 45.7 bits (109), Expect = 2e-05
Identities = 21/73 (28%), Positives = 39/73 (53%), Gaps = 8/73 (10%)
Query: 497 NIALDVARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRI-TAKVDVY 555
N+ L ++++ADFG P + + + GT YL PE ++ GR+ KVD++
Sbjct: 139 NLLLG--SAGELKIADFGWSVHAPSSRRTDL----CGTLDYLPPE-MIEGRMHDEKVDLW 191
Query: 556 SFGMILMDLITGR 568
S G++ + + G+
Sbjct: 192 SLGVLCYEFLVGK 204
|
| >2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* Length = 322 | Back alignment and structure |
|---|
Score = 46.1 bits (110), Expect = 2e-05
Identities = 23/70 (32%), Positives = 37/70 (52%), Gaps = 9/70 (12%)
Query: 497 NIALDVARGD-DMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITA----K 551
N+ L D +++ DFG +++ E S++ + GT YLAPE ++ TA
Sbjct: 144 NVLLSSQEEDCLIKITDFGHSKILGET---SLMRTLCGTPTYLAPE-VLVSVGTAGYNRA 199
Query: 552 VDVYSFGMIL 561
VD +S G+IL
Sbjct: 200 VDCWSLGVIL 209
|
| >2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310 | Back alignment and structure |
|---|
Score = 46.1 bits (110), Expect = 2e-05
Identities = 40/204 (19%), Positives = 77/204 (37%), Gaps = 55/204 (26%)
Query: 418 NNFSEENRLGRGGVGTVYKGE-LKDGTEVGVKRMELGSVT-EQGIAQFESEITVLTK--- 472
NF E ++GRG VY+ L DG V +K++++ + + A EI +L +
Sbjct: 32 ANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNH 91
Query: 473 -------------------------GTLGRHLFNWEEEGL---EP--LEWNTRLNIALD- 501
G L R + +++++ E ++ +L AL+
Sbjct: 92 PNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEH 151
Query: 502 -----------------VARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIV 544
+ +++ D GL R + K + + GT Y++PE I
Sbjct: 152 MHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFF--SSKTTAAHSLVGTPYYMSPERIH 209
Query: 545 TGRITAKVDVYSFGMILMDLITGR 568
K D++S G +L ++ +
Sbjct: 210 ENGYNFKSDIWSLGCLLYEMAALQ 233
|
| >2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri} Length = 208 | Back alignment and structure |
|---|
Score = 45.0 bits (107), Expect = 2e-05
Identities = 35/130 (26%), Positives = 55/130 (42%), Gaps = 32/130 (24%)
Query: 106 DQNRKGTVPP-ILKKLSSMAVMYLENNQLRGPIPSLVGSLEFFSAYEANISGTIPDFIGT 164
N+ ++P + KL+S+ + L NQL+ +P+ V F
Sbjct: 60 GGNKLQSLPNGVFNKLTSLTYLNLSTNQLQS-LPNGV-------------------F--- 96
Query: 165 DTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHP 224
D QL L L N LQ ++P G+ F L+ L+DL L N+L + P F+
Sbjct: 97 DKLTQLKELALNTNQLQ-SLPD--GV-F---DKLTQLKDLRLYQNQLKSV-PDGVFDRLT 148
Query: 225 KLTTLNLTNN 234
L + L +N
Sbjct: 149 SLQYIWLHDN 158
|
| >2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri} Length = 208 | Back alignment and structure |
|---|
Score = 45.0 bits (107), Expect = 2e-05
Identities = 34/152 (22%), Positives = 63/152 (41%), Gaps = 33/152 (21%)
Query: 100 TNIELQDQNRKGTVPPILKKLSSMAVMYLENNQLRGPIPSLVGSLEFFSAYEANISGTIP 159
T ++L+ + K + +L+S+ +YL N+L+ ++P
Sbjct: 31 TYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQ----------------------SLP 68
Query: 160 DFIGTDTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSS 219
+ + + L+YL+L N LQ F L+ L++L+L N+L + P
Sbjct: 69 NGV-FNKLTSLTYLNLSTNQLQSLPNGVF-------DKLTQLKELALNTNQLQSL-PDGV 119
Query: 220 FNNHPKLTTLNLTNNLLQG-PTPRFNN-SKLT 249
F+ +L L L N L+ P F+ + L
Sbjct: 120 FDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQ 151
|
| >2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis} Length = 362 | Back alignment and structure |
|---|
Score = 46.1 bits (108), Expect = 2e-05
Identities = 16/79 (20%), Positives = 27/79 (34%), Gaps = 7/79 (8%)
Query: 161 FIGTDTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLT---GIFPV 217
D FP L +L + + Q + F + L LE + + LT +
Sbjct: 245 LFSKDRFPNLKWLGIVDAEEQNVVVEMF----LESDILPQLETMDISAGVLTDEGARLLL 300
Query: 218 SSFNNHPKLTTLNLTNNLL 236
+ L +N+ N L
Sbjct: 301 DHVDKIKHLKFINMKYNYL 319
|
| >3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327 | Back alignment and structure |
|---|
Score = 45.8 bits (109), Expect = 2e-05
Identities = 38/206 (18%), Positives = 67/206 (32%), Gaps = 70/206 (33%)
Query: 423 ENRLGRGGVGTVYKGELK-----DGTEVGVKRMELGSVTEQGIAQFESEITVLTK----- 472
++LG+G G+V G V VK+++ +Q F+ EI +L
Sbjct: 28 ISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQ--RDFQREIQILKALHSDF 85
Query: 473 -------------------------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG-- 505
G L L L+ + L + + +G
Sbjct: 86 IVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRAR----LDASRLLLYSSQICKGME 141
Query: 506 ----------------------DDMRVADFGLVRLVPENGKHSILTKVAGT---FGYLAP 540
+++ADFGL +L+P + + AP
Sbjct: 142 YLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLD--KDYYVVREPGQSPIFWYAP 199
Query: 541 EYIVTGRITAKVDVYSFGMILMDLIT 566
E + + + DV+SFG++L +L T
Sbjct: 200 ESLSDNIFSRQSDVWSFGVVLYELFT 225
|
| >3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Length = 419 | Back alignment and structure |
|---|
Score = 46.2 bits (110), Expect = 2e-05
Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 7/75 (9%)
Query: 497 NIALDVARGD-DMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRI---TAKV 552
N+ L D +++ DFG +++ E S++ + GT YLAPE +V+ V
Sbjct: 269 NVLLSSQEEDCLIKITDFGHSKILGET---SLMRTLCGTPTYLAPEVLVSVGTAGYNRAV 325
Query: 553 DVYSFGMILMDLITG 567
D +S G+IL ++G
Sbjct: 326 DCWSLGVILFICLSG 340
|
| >3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3o71_A 3r63_A 3c9w_A* 2y9q_A* 3sa0_A* 1wzy_A* 2e14_A* 1tvo_A* 2ojg_A* 2oji_A* ... Length = 364 | Back alignment and structure |
|---|
Score = 46.1 bits (110), Expect = 2e-05
Identities = 21/64 (32%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
Query: 507 DMRVADFGLVRLV-PENGKHSILTKVAGTFGYLAPEYIVTGRI-TAKVDVYSFGMILMDL 564
D+++ DFGL R+ P++ LT+ T Y APE ++ + T +D++S G IL ++
Sbjct: 166 DLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 225
Query: 565 ITGR 568
++ R
Sbjct: 226 LSNR 229
|
| >3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573 | Back alignment and structure |
|---|
Score = 46.0 bits (109), Expect = 3e-05
Identities = 18/72 (25%), Positives = 35/72 (48%), Gaps = 5/72 (6%)
Query: 497 NIALDVARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGR-ITAKVDVY 555
NI R +++++ DFGL + + GT + APE + G+ + D++
Sbjct: 285 NIMFTTKRSNELKLIDFGLTAHLDPKQS---VKVTTGTAEFAAPE-VAEGKPVGYYTDMW 340
Query: 556 SFGMILMDLITG 567
S G++ L++G
Sbjct: 341 SVGVLSYILLSG 352
|
| >1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 Length = 344 | Back alignment and structure |
|---|
Score = 45.4 bits (108), Expect = 4e-05
Identities = 43/228 (18%), Positives = 65/228 (28%), Gaps = 92/228 (40%)
Query: 423 ENRLGRGGVGTVYKGELKDG------TEVGVKRMELGSVTEQGIAQFESEITVLTKGTLG 476
LG G G V +V VK ++ + SE+ ++T+ LG
Sbjct: 50 GKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKA-DSSEREALMSELKMMTQ--LG 106
Query: 477 RH-------------------------------------------------LFNWEEEGL 487
H EEE L
Sbjct: 107 SHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDL 166
Query: 488 EPLEWNTRLNIALDVARG----------------------DD--MRVADFGLVRLVPENG 523
L + L A VA+G +++ DFGL R +
Sbjct: 167 NVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVVKICDFGLARDI---- 222
Query: 524 KHSILTKVAGTFGYL-----APEYIVTGRITAKVDVYSFGMILMDLIT 566
S V L APE + G T K DV+S+G++L ++ +
Sbjct: 223 -MSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFS 269
|
| >2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus} Length = 174 | Back alignment and structure |
|---|
Score = 43.8 bits (104), Expect = 4e-05
Identities = 32/95 (33%), Positives = 42/95 (44%), Gaps = 16/95 (16%)
Query: 158 IPDFIGTDTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPV 217
+P I TD L L NN + P F +L L+ L NKLT I P
Sbjct: 27 VPAGIPTDK----QRLWLNNNQITKLEPGVF-------DHLVNLQQLYFNSNKLTAI-PT 74
Query: 218 SSFNNHPKLTTLNLTNNLLQGPTPR--FNN-SKLT 249
F+ +LT L+L +N L+ PR F+N LT
Sbjct: 75 GVFDKLTQLTQLDLNDNHLKS-IPRGAFDNLKSLT 108
|
| >2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373 | Back alignment and structure |
|---|
Score = 45.1 bits (107), Expect = 4e-05
Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 5/72 (6%)
Query: 497 NIALDVARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGR-ITAKVDVY 555
NI +++ DFGL R K L GT +LAPE +V ++ D++
Sbjct: 217 NILCVNRDAKQIKIIDFGLARRYKPREK---LKVNFGTPEFLAPE-VVNYDFVSFPTDMW 272
Query: 556 SFGMILMDLITG 567
S G+I L++G
Sbjct: 273 SVGVIAYMLLSG 284
|
| >2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* Length = 314 | Back alignment and structure |
|---|
Score = 44.9 bits (107), Expect = 5e-05
Identities = 39/226 (17%), Positives = 69/226 (30%), Gaps = 88/226 (38%)
Query: 423 ENRLGRGGVGTVYKGELKDG------TEVGVKRMELGSVTEQGIAQFESEITVLTK---- 472
LG G G V K T V VK ++ + + + SE VL +
Sbjct: 28 GKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENA-SPSELRDLLSEFNVLKQVNHP 86
Query: 473 ------------------------GTLGRHL-------------------FNWEEEGLEP 489
G+L L + +
Sbjct: 87 HVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERA 146
Query: 490 LEWNTRLNIALDVARG----------------------DD--MRVADFGLVRLVPENGKH 525
L ++ A +++G + M+++DFGL R V +
Sbjct: 147 LTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDV-----Y 201
Query: 526 SILTKVAGTFGYL-----APEYIVTGRITAKVDVYSFGMILMDLIT 566
+ V + G + A E + T + DV+SFG++L +++T
Sbjct: 202 EEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
|
| >2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... Length = 276 | Back alignment and structure |
|---|
Score = 44.5 bits (106), Expect = 5e-05
Identities = 25/74 (33%), Positives = 43/74 (58%), Gaps = 5/74 (6%)
Query: 497 NIALDVARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGR--ITAKVDV 554
N+ LD D+++++DFGL + N + +L K+ GT Y+APE ++ R VDV
Sbjct: 135 NLLLD--ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE-LLKRREFHAEPVDV 191
Query: 555 YSFGMILMDLITGR 568
+S G++L ++ G
Sbjct: 192 WSCGIVLTAMLAGE 205
|
| >3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* Length = 284 | Back alignment and structure |
|---|
Score = 44.5 bits (106), Expect = 5e-05
Identities = 19/53 (35%), Positives = 30/53 (56%), Gaps = 5/53 (9%)
Query: 510 VADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRI-TAKVDVYSFGMIL 561
+ADFGL V ++ AGT GYL+PE ++ + VD+++ G+IL
Sbjct: 149 LADFGLAIEVNDSEA---WHGFAGTPGYLSPE-VLKKDPYSKPVDIWACGVIL 197
|
| >2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} Length = 305 | Back alignment and structure |
|---|
Score = 44.6 bits (106), Expect = 5e-05
Identities = 18/75 (24%), Positives = 32/75 (42%), Gaps = 6/75 (8%)
Query: 497 NIALDVARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRIT---AKVD 553
N+ L G ++++ G+ + G+ + PE I G T KVD
Sbjct: 139 NLLLT--TGGTLKISALGVAEALHPFAADDTCRTSQGSPAFQPPE-IANGLDTFSGFKVD 195
Query: 554 VYSFGMILMDLITGR 568
++S G+ L ++ TG
Sbjct: 196 IWSAGVTLYNITTGL 210
|
| >2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B Length = 362 | Back alignment and structure |
|---|
Score = 44.6 bits (106), Expect = 6e-05
Identities = 19/53 (35%), Positives = 30/53 (56%), Gaps = 5/53 (9%)
Query: 510 VADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRI-TAKVDVYSFGMIL 561
+ADFGL V ++ AGT GYL+PE ++ + VD+++ G+IL
Sbjct: 172 LADFGLAIEVNDS---EAWHGFAGTPGYLSPE-VLKKDPYSKPVDIWACGVIL 220
|
| >3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351 | Back alignment and structure |
|---|
Score = 44.6 bits (106), Expect = 6e-05
Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 4/53 (7%)
Query: 510 VADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRI-TAKVDVYSFGMIL 561
+ FG+ + E+G + GT ++APE +V VDV+ G+IL
Sbjct: 174 LGGFGVAIQLGESGL--VAGGRVGTPHFMAPE-VVKREPYGKPVDVWGCGVIL 223
|
| >3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B Length = 543 | Back alignment and structure |
|---|
Score = 44.8 bits (106), Expect = 6e-05
Identities = 21/72 (29%), Positives = 37/72 (51%), Gaps = 4/72 (5%)
Query: 497 NIALDVARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYS 556
N+ LD G+ +R++D GL + + AGT G++APE ++ VD ++
Sbjct: 319 NVLLD-DDGN-VRISDLGLAVELKAGQTKT--KGYAGTPGFMAPELLLGEEYDFSVDYFA 374
Query: 557 FGMILMDLITGR 568
G+ L ++I R
Sbjct: 375 LGVTLYEMIAAR 386
|
| >3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A Length = 325 | Back alignment and structure |
|---|
Score = 44.2 bits (105), Expect = 7e-05
Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Query: 507 DMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMIL 561
++++ DFG RL P + + L T Y APE + D++S G+IL
Sbjct: 147 EIKIIDFGFARLKPPDNQ--PLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVIL 199
|
| >3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D Length = 170 | Back alignment and structure |
|---|
Score = 43.0 bits (102), Expect = 7e-05
Identities = 30/95 (31%), Positives = 43/95 (45%), Gaps = 16/95 (16%)
Query: 158 IPDFIGTDTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPV 217
+P I T T L L +N + P F L+ L L L +N+LT + P
Sbjct: 24 VPTGIPTTT----QVLYLYDNQITKLEPGVF-------DRLTQLTRLDLDNNQLTVL-PA 71
Query: 218 SSFNNHPKLTTLNLTNNLLQGPTPR--FNN-SKLT 249
F+ +LT L+L +N L+ PR F+N LT
Sbjct: 72 GVFDKLTQLTQLSLNDNQLKS-IPRGAFDNLKSLT 105
|
| >3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D Length = 170 | Back alignment and structure |
|---|
Score = 39.9 bits (94), Expect = 6e-04
Identities = 28/70 (40%), Positives = 37/70 (52%), Gaps = 8/70 (11%)
Query: 165 DTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHP 224
D QL+ LDL NN L +P+ G+ F L+ L LSL N+L I P +F+N
Sbjct: 51 DRLTQLTRLDLDNNQLT-VLPA--GV-F---DKLTQLTQLSLNDNQLKSI-PRGAFDNLK 102
Query: 225 KLTTLNLTNN 234
LT + L NN
Sbjct: 103 SLTHIWLLNN 112
|
| >4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} Length = 384 | Back alignment and structure |
|---|
Score = 44.2 bits (105), Expect = 9e-05
Identities = 23/75 (30%), Positives = 38/75 (50%), Gaps = 8/75 (10%)
Query: 497 NIALDVARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRI---TAKVD 553
NI LD G + + DF + ++P + T +AGT Y+APE + + + VD
Sbjct: 145 NILLD-EHGH-VHITDFNIAAMLPRETQI---TTMAGTKPYMAPEMFSSRKGAGYSFAVD 199
Query: 554 VYSFGMILMDLITGR 568
+S G+ +L+ GR
Sbjct: 200 WWSLGVTAYELLRGR 214
|
| >1uu3_A HPDK1, 3-phosphoinositide dependent protein kinase-1; PKB, inhibitor, LY333531, diabetes, cancer, transferase, serine/threonine-protein kinase; HET: SEP LY4; 1.7A {Homo sapiens} SCOP: d.144.1.7 PDB: 1okz_A* 1oky_A* 1uu7_A* 1uu8_A* 2biy_A* 3rwp_A* 2xch_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* ... Length = 310 | Back alignment and structure |
|---|
Score = 43.8 bits (104), Expect = 9e-05
Identities = 19/74 (25%), Positives = 35/74 (47%), Gaps = 6/74 (8%)
Query: 497 NIALDVARGDDM--RVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDV 554
NI L+ +DM ++ DFG +++ K + GT Y++PE + D+
Sbjct: 160 NILLN----EDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDL 215
Query: 555 YSFGMILMDLITGR 568
++ G I+ L+ G
Sbjct: 216 WALGCIIYQLVAGL 229
|
| >3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* Length = 323 | Back alignment and structure |
|---|
Score = 43.8 bits (104), Expect = 1e-04
Identities = 25/74 (33%), Positives = 43/74 (58%), Gaps = 5/74 (6%)
Query: 497 NIALDVARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGR--ITAKVDV 554
N+ LD D+++++DFGL + N + +L K+ GT Y+APE ++ R VDV
Sbjct: 135 NLLLD--ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE-LLKRREFHAEPVDV 191
Query: 555 YSFGMILMDLITGR 568
+S G++L ++ G
Sbjct: 192 WSCGIVLTAMLAGE 205
|
| >2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A Length = 342 | Back alignment and structure |
|---|
Score = 43.8 bits (104), Expect = 1e-04
Identities = 14/53 (26%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Query: 509 RVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMIL 561
R+ DFG + + +L T ++APE + A D++S G++L
Sbjct: 160 RICDFGFAKQLRAENG--LLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLL 210
|
| >2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* Length = 361 | Back alignment and structure |
|---|
Score = 43.9 bits (104), Expect = 1e-04
Identities = 18/73 (24%), Positives = 33/73 (45%), Gaps = 5/73 (6%)
Query: 497 NIALDVARGDDMRV--ADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDV 554
NI L + DFGL + + + + GT ++APE + + + D+
Sbjct: 145 NIMLLDKNIPIPHIKLIDFGLAHEIEDGVE---FKNIFGTPEFVAPEIVNYEPLGLEADM 201
Query: 555 YSFGMILMDLITG 567
+S G+I L++G
Sbjct: 202 WSIGVITYILLSG 214
|
| >3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} Length = 335 | Back alignment and structure |
|---|
Score = 43.6 bits (103), Expect = 1e-04
Identities = 19/94 (20%), Positives = 36/94 (38%), Gaps = 15/94 (15%)
Query: 497 NIALDVARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGR--ITAKVDV 554
NI + +++ DFG + GT Y APE ++ G ++++
Sbjct: 160 NIVIA-EDFT-IKLIDFGSAAYLERGKL---FYTFCGTIEYCAPE-VLMGNPYRGPELEM 213
Query: 555 YSFGMILMDLITG-------RKVVDATHSDPEYI 581
+S G+ L L+ + V+A P +
Sbjct: 214 WSLGVTLYTLVFEENPFCELEETVEAAIHPPYLV 247
|
| >2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A Length = 321 | Back alignment and structure |
|---|
Score = 43.4 bits (103), Expect = 1e-04
Identities = 15/61 (24%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Query: 507 DMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT 566
+++ DFGL + + + + GT ++APE + + + D++S G+I L++
Sbjct: 157 HIKLIDFGLAHEIEDGVE---FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLS 213
Query: 567 G 567
G
Sbjct: 214 G 214
|
| >1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 Length = 321 | Back alignment and structure |
|---|
Score = 43.4 bits (103), Expect = 1e-04
Identities = 15/72 (20%), Positives = 30/72 (41%), Gaps = 5/72 (6%)
Query: 497 NIALDVARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGR-ITAKVDVY 555
NI R +++ +FG R + + Y APE + ++ D++
Sbjct: 132 NIIYQTRRSSTIKIIEFGQARQLKPGDN---FRLLFTAPEYYAPE-VHQHDVVSTATDMW 187
Query: 556 SFGMILMDLITG 567
S G ++ L++G
Sbjct: 188 SLGTLVYVLLSG 199
|
| >2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} Length = 326 | Back alignment and structure |
|---|
Score = 43.4 bits (103), Expect = 1e-04
Identities = 15/63 (23%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
Query: 505 GDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDL 564
+++ DFGL + + + GT ++APE + + + D++S G+I L
Sbjct: 154 KPRIKIIDFGLAHKIDFGNE---FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYIL 210
Query: 565 ITG 567
++G
Sbjct: 211 LSG 213
|
| >3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} Length = 362 | Back alignment and structure |
|---|
Score = 43.1 bits (102), Expect = 2e-04
Identities = 15/63 (23%), Positives = 28/63 (44%), Gaps = 4/63 (6%)
Query: 507 DMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRI-TAKVDVYSFGMILMDLI 565
D+ + DF L R + T Y APE ++ + T VD++S G ++ ++
Sbjct: 172 DITICDFNLAREDTADAN---KTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMF 228
Query: 566 TGR 568
+
Sbjct: 229 NRK 231
|
| >2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* Length = 576 | Back alignment and structure |
|---|
Score = 43.6 bits (103), Expect = 2e-04
Identities = 28/72 (38%), Positives = 40/72 (55%), Gaps = 5/72 (6%)
Query: 497 NIALDVARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYS 556
NI LD G +R++D GL VPE I +V GT GY+APE + R T D ++
Sbjct: 316 NILLD-DHGH-IRISDLGLAVHVPEGQT--IKGRV-GTVGYMAPEVVKNERYTFSPDWWA 370
Query: 557 FGMILMDLITGR 568
G +L ++I G+
Sbjct: 371 LGCLLYEMIAGQ 382
|
| >3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278 | Back alignment and structure |
|---|
Score = 42.9 bits (102), Expect = 2e-04
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 8/74 (10%)
Query: 497 NIALDVARGDDMRVADFGL-VRLVPENGKHSILTKVAGTFGYLAPEYIVTGRI-TAKVDV 554
N+ L R ++++ADFGL +L + K + GT Y++PE I T + DV
Sbjct: 142 NLLLT--RNMNIKIADFGLATQLKMPHEK---HYTLCGTPNYISPE-IATRSAHGLESDV 195
Query: 555 YSFGMILMDLITGR 568
+S G + L+ GR
Sbjct: 196 WSLGCMFYTLLIGR 209
|
| >3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297 | Back alignment and structure |
|---|
Score = 42.7 bits (101), Expect = 2e-04
Identities = 44/204 (21%), Positives = 81/204 (39%), Gaps = 57/204 (27%)
Query: 414 RNATNNFSEENRLGRGGVGTVYKG-ELKDGTEVGVKRMELGSVTEQGIAQFESEITVLTK 472
+ ++ ++G+G GTVY ++ G EV +++M L ++ + +EI V+ +
Sbjct: 16 GDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELII--NEILVMRE 73
Query: 473 -------GTLGRHLFN---W---------------------EEE----------GLEPLE 491
L +L W E + LE L
Sbjct: 74 NKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLH 133
Query: 492 WNTRL-------NIALDVARGDDMRVADFGL-VRLVPENGKHSILTKVAGTFGYLAPEYI 543
N + NI L G +++ DFG ++ PE K + + GT ++APE +
Sbjct: 134 SNQVIHRDIKSDNILLG-MDG-SVKLTDFGFCAQITPEQSKR---STMVGTPYWMAPEVV 188
Query: 544 VTGRITAKVDVYSFGMILMDLITG 567
KVD++S G++ +++I G
Sbjct: 189 TRKAYGPKVDIWSLGIMAIEMIEG 212
|
| >1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* Length = 397 | Back alignment and structure |
|---|
Score = 43.0 bits (101), Expect = 2e-04
Identities = 19/82 (23%), Positives = 35/82 (42%), Gaps = 9/82 (10%)
Query: 507 DMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT 566
+++AD G V ++ I T+ Y + E ++ D++S + +L T
Sbjct: 234 KVKIADLGNACWVHKHFTEDIQTRQ-----YRSLEVLIGSGYNTPADIWSTACMAFELAT 288
Query: 567 GRKVVDATHSDPEYII---HLA 585
G + + HS EY H+A
Sbjct: 289 GDYLFE-PHSGEEYTRDEDHIA 309
|
| >3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* Length = 327 | Back alignment and structure |
|---|
Score = 42.6 bits (101), Expect = 2e-04
Identities = 20/61 (32%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Query: 507 DMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT 566
D+++ DFG+ R + + L ++ GT YLAPE + IT D+++ G+I L+T
Sbjct: 172 DIKIVDFGMSRKIGHACE---LREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLT 228
Query: 567 G 567
Sbjct: 229 H 229
|
| >3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359 | Back alignment and structure |
|---|
Score = 42.6 bits (100), Expect = 2e-04
Identities = 18/70 (25%), Positives = 34/70 (48%), Gaps = 10/70 (14%)
Query: 502 VARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYL-----APEYIVTGRITAKVDVYS 556
++ + +++ DFGL R + ++ V L APE I T + DV+S
Sbjct: 226 LSEKNVVKICDFGLARDIYKDP-----DYVRKGDARLPLKWMAPETIFDRVYTIQSDVWS 280
Query: 557 FGMILMDLIT 566
FG++L ++ +
Sbjct: 281 FGVLLWEIFS 290
|
| >3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... Length = 283 | Back alignment and structure |
|---|
Score = 42.6 bits (101), Expect = 2e-04
Identities = 14/61 (22%), Positives = 31/61 (50%), Gaps = 3/61 (4%)
Query: 507 DMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT 566
+++ DFG+ + + + GT ++APE + + + D++S G+I L++
Sbjct: 150 RIKLIDFGIAHKIEAGNE---FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLS 206
Query: 567 G 567
G
Sbjct: 207 G 207
|
| >1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 Length = 343 | Back alignment and structure |
|---|
Score = 42.3 bits (100), Expect = 3e-04
Identities = 39/222 (17%), Positives = 66/222 (29%), Gaps = 89/222 (40%)
Query: 423 ENRLGRGGVGTVYKGELKDG------TEVGVKRMELGSVTEQGIAQFESEITVLTK---- 472
+G G G V++ T V VK ++ + + A F+ E ++ +
Sbjct: 52 VRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEA-SADMQADFQREAALMAEFDNP 110
Query: 473 ------------------------GTLGRHL-------------------FNWEEEGLEP 489
G L L G P
Sbjct: 111 NIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPP 170
Query: 490 LEWNTRLNIALDVARG----------------------DD--MRVADFGLVRLVPENGKH 525
L +L IA VA G ++ +++ADFGL R + +
Sbjct: 171 LSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSRNI-----Y 225
Query: 526 SILTKVAGTFGYL-----APEYIVTGRITAKVDVYSFGMILM 562
S A + PE I R T + DV+++G +++
Sbjct: 226 SADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYG-VVL 266
|
| >2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317 | Back alignment and structure |
|---|
Score = 42.3 bits (100), Expect = 3e-04
Identities = 40/218 (18%), Positives = 69/218 (31%), Gaps = 72/218 (33%)
Query: 419 NFSEENRLGRGGVGTVYKGE-LKDGTEVGVKRMELGSVTEQGIAQFESEITVL------- 470
++ +LG GG V E L DG +KR+ +Q + + E +
Sbjct: 30 HYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHE--QQDREEAQREADMHRLFNHPN 87
Query: 471 -------------------------TKGTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG 505
+GTL + +++G L + L + L + RG
Sbjct: 88 ILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKG-NFLTEDQILWLLLGICRG 146
Query: 506 ----------------------DDMRV--ADFGLVRL--VPENGKHSILT-----KVAGT 534
D+ + D G + + G LT T
Sbjct: 147 LEAIHAKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCT 206
Query: 535 FGYLAPEYIVTGR----ITAKVDVYSFGMILMDLITGR 568
Y APE + + + I + DV+S G +L ++ G
Sbjct: 207 ISYRAPE-LFSVQSHCVIDERTDVWSLGCVLYAMMFGE 243
|
| >2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321 | Back alignment and structure |
|---|
Score = 42.4 bits (100), Expect = 3e-04
Identities = 37/198 (18%), Positives = 70/198 (35%), Gaps = 57/198 (28%)
Query: 420 FSEENRLGRGGVGTVYKG-ELKDGTEVGVKRMELGSVTEQGIAQFESEITVLTK------ 472
++G G G V E G +V VK M+L +Q +E+ ++
Sbjct: 47 LDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRK--QQRRELLFNEVVIMRDYQHFNV 104
Query: 473 -GTLGRHLFN---W---------------------EEE----------GLEPLEWNTRL- 496
+L W EE+ L L +
Sbjct: 105 VEMYKSYLVGEELWVLMEFLQGGALTDIVSQVRLNEEQIATVCEAVLQALAYLHAQGVIH 164
Query: 497 ------NIALDVARGDDMRVADFGL-VRLVPENGKHSILTKVAGTFGYLAPEYIVTGRIT 549
+I L G ++++DFG ++ + K + GT ++APE I
Sbjct: 165 RDIKSDSILLT-LDG-RVKLSDFGFCAQISKDVPKR---KSLVGTPYWMAPEVISRSLYA 219
Query: 550 AKVDVYSFGMILMDLITG 567
+VD++S G+++++++ G
Sbjct: 220 TEVDIWSLGIMVIEMVDG 237
|
| >1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298 | Back alignment and structure |
|---|
Score = 41.9 bits (99), Expect = 4e-04
Identities = 24/73 (32%), Positives = 33/73 (45%), Gaps = 15/73 (20%)
Query: 497 NIALDVARGDDM--RVADFGLVRLVPENGKHSILTKVAGTFGYLAPE------YIVTGRI 548
NI LD DDM ++ DFG + L +V GT YLAPE
Sbjct: 154 NILLD----DDMNIKLTDFGFSCQLDPG---EKLREVCGTPSYLAPEIIECSMNDNHPGY 206
Query: 549 TAKVDVYSFGMIL 561
+VD++S G+I+
Sbjct: 207 GKEVDMWSTGVIM 219
|
| >1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C Length = 400 | Back alignment and structure |
|---|
Score = 41.6 bits (98), Expect = 5e-04
Identities = 14/53 (26%), Positives = 25/53 (47%), Gaps = 3/53 (5%)
Query: 509 RVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMIL 561
++ DFG + + LT T Y+APE + + D++S G+I+
Sbjct: 204 KLTDFGFAKETTSHNS---LTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIM 253
|
| >2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} Length = 326 | Back alignment and structure |
|---|
Score = 41.6 bits (98), Expect = 5e-04
Identities = 22/66 (33%), Positives = 31/66 (46%), Gaps = 4/66 (6%)
Query: 408 IPIQVLRNATNNFSEENRLGRGGVGTVYKG-ELKDGTEVGVKRMELGSVTEQGIAQFESE 466
I + LR+ F +G G G VYKG +K G +K M++ E+ I Q E
Sbjct: 14 IDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQ---E 70
Query: 467 ITVLTK 472
I +L K
Sbjct: 71 INMLKK 76
|
| >2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* Length = 353 | Back alignment and structure |
|---|
Score = 41.5 bits (98), Expect = 6e-04
Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 9/71 (12%)
Query: 507 DMRVADFGLVRLVPENGKHSILTKVAGTFG--------YLAPEYIVTGRI-TAKVDVYSF 557
D++V DFGL R++ E+ + + Y APE ++T + +DV+S
Sbjct: 150 DLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSC 209
Query: 558 GMILMDLITGR 568
G IL +L R
Sbjct: 210 GCILAELFLRR 220
|
| >3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 41.5 bits (98), Expect = 6e-04
Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 6/63 (9%)
Query: 507 DMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVT-GRITAKVDVYSFGMILMDLI 565
++++ DFGL R +T T Y APE I++ VD++S G I+ +++
Sbjct: 164 ELKILDFGLARHADAE-----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEML 218
Query: 566 TGR 568
TG+
Sbjct: 219 TGK 221
|
| >3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* Length = 336 | Back alignment and structure |
|---|
Score = 41.6 bits (98), Expect = 6e-04
Identities = 14/53 (26%), Positives = 25/53 (47%), Gaps = 4/53 (7%)
Query: 509 RVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMIL 561
++ DFG + +N L T Y+APE + + D++S G+I+
Sbjct: 171 KLTDFGFAKETTQN----ALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIM 219
|
| >2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} Length = 476 | Back alignment and structure |
|---|
Score = 41.7 bits (98), Expect = 6e-04
Identities = 38/161 (23%), Positives = 65/161 (40%), Gaps = 45/161 (27%)
Query: 497 NIALDVARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGR--ITAKVDV 554
N+ LD + ++ADFGL ++ + L G+ Y APE +++GR +VD+
Sbjct: 146 NVLLD--AHMNAKIADFGLSNMMSDGEF---LRTSCGSPNYAAPE-VISGRLYAGPEVDI 199
Query: 555 YSFGMILMDLITG-------------RKVVDATHSDPEYI----IHL------------A 585
+S G+IL L+ G +K+ D P+Y+ I L A
Sbjct: 200 WSSGVILYALLCGTLPFDDDHVPTLFKKICDGIFYTPQYLNPSVISLLKHMLQVDPMKRA 259
Query: 586 T--------WFQKMHKNHDTFQMAIDKTIQLDEENLANVST 618
T WF++ + + + +D+E L V
Sbjct: 260 TIKDIREHEWFKQDLPKYLFPEDPSYSSTMIDDEALKEVCE 300
|
| >2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... Length = 367 | Back alignment and structure |
|---|
Score = 41.5 bits (98), Expect = 6e-04
Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 6/63 (9%)
Query: 507 DMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVT-GRITAKVDVYSFGMILMDLI 565
++++ DFGL R + +T T Y APE ++ VD++S G I+ +L+
Sbjct: 170 ELKILDFGLARHTADE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 224
Query: 566 TGR 568
TGR
Sbjct: 225 TGR 227
|
| >1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 Length = 367 | Back alignment and structure |
|---|
Score = 41.2 bits (97), Expect = 7e-04
Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 6/63 (9%)
Query: 507 DMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRI-TAKVDVYSFGMILMDLI 565
++++ DFGL R +T T Y APE I+ T VD++S G I+ ++I
Sbjct: 166 ELKILDFGLARQADSE-----MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMI 220
Query: 566 TGR 568
TG+
Sbjct: 221 TGK 223
|
| >3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A Length = 361 | Back alignment and structure |
|---|
Score = 41.2 bits (97), Expect = 7e-04
Identities = 20/74 (27%), Positives = 33/74 (44%), Gaps = 6/74 (8%)
Query: 497 NIALDVARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRI--TAKVDV 554
N LD + +++ DFG + HS GT Y+APE ++ + DV
Sbjct: 146 NTLLDGSPAPRLKICDFGYSKSSVL---HSQPKSTVGTPAYIAPE-VLLRQEYDGKIADV 201
Query: 555 YSFGMILMDLITGR 568
+S G+ L ++ G
Sbjct: 202 WSCGVTLYVMLVGA 215
|
| >2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365 | Back alignment and structure |
|---|
Score = 41.2 bits (97), Expect = 7e-04
Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 9/61 (14%)
Query: 507 DMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITA------KVDVYSFGMI 560
+R++DFG + K L ++ GT GYLAPE + +VD+++ G+I
Sbjct: 238 QIRLSDFGFSCHLEPGEK---LRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVI 294
Query: 561 L 561
L
Sbjct: 295 L 295
|
| >1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289 | Back alignment and structure |
|---|
Score = 40.8 bits (96), Expect = 8e-04
Identities = 16/63 (25%), Positives = 25/63 (39%), Gaps = 3/63 (4%)
Query: 417 TNNFSEENRLGRGGVGTVYKG-ELKDGTEVGVKRMELGSVTEQGIAQFESEITVLTKGTL 475
T F E ++G G G+V+K + DG +KR + E+ L
Sbjct: 10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAV--L 67
Query: 476 GRH 478
G+H
Sbjct: 68 GQH 70
|
| >3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3mb7_A* 3mb6_A* 3owj_A* 3owk_A* ... Length = 330 | Back alignment and structure |
|---|
Score = 41.1 bits (97), Expect = 8e-04
Identities = 16/74 (21%), Positives = 38/74 (51%), Gaps = 5/74 (6%)
Query: 497 NIALDVARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRI-TAKVDVY 555
N+ +D +R+ D+GL ++++ +VA + + PE +V ++ +D++
Sbjct: 160 NVMIDHEHRK-LRLIDWGLAEFYHPGQEYNV--RVA-SRYFKGPELLVDYQMYDYSLDMW 215
Query: 556 SFGMILMDLITGRK 569
S G +L +I ++
Sbjct: 216 SLGCMLASMIFRKE 229
|
| >3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328 | Back alignment and structure |
|---|
Score = 40.7 bits (96), Expect = 9e-04
Identities = 28/100 (28%), Positives = 44/100 (44%), Gaps = 21/100 (21%)
Query: 497 NIALDVARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGR--ITAKVDV 554
N+ LD ++++ADFG GK L G Y APE + G+ +VDV
Sbjct: 144 NLLLD--ADMNIKIADFGFSNEFTVGGK---LDAFCGAPPYAAPE-LFQGKKYDGPEVDV 197
Query: 555 YSFGMILMDLITG-------------RKVVDATHSDPEYI 581
+S G+IL L++G +V+ + P Y+
Sbjct: 198 WSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYM 237
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 631 | |||
| 4asz_A | 299 | BDNF/NT-3 growth factors receptor; transferase, TR | 99.97 | |
| 3omv_A | 307 | RAF proto-oncogene serine/threonine-protein kinas; | 99.97 | |
| 4aoj_A | 329 | High affinity nerve growth factor receptor; transf | 99.97 | |
| 4gt4_A | 308 | Tyrosine-protein kinase transmembrane receptor RO; | 99.97 | |
| 4b9d_A | 350 | Serine/threonine-protein kinase NEK1; transferase, | 99.97 | |
| 4ase_A | 353 | Vascular endothelial growth factor receptor 2; tra | 99.97 | |
| 3fpq_A | 290 | Serine/threonine-protein kinase WNK1; protein seri | 99.96 | |
| 4aw0_A | 311 | HPDK1, 3-phosphoinositide-dependent protein kinase | 99.96 | |
| 4fih_A | 346 | Serine/threonine-protein kinase PAK 4; kinase doma | 99.96 | |
| 3hyh_A | 275 | Carbon catabolite-derepressing protein kinase; kin | 99.96 | |
| 3ubd_A | 304 | Ribosomal protein S6 kinase alpha-3; kinase-inhibi | 99.96 | |
| 4fie_A | 423 | Serine/threonine-protein kinase PAK 4; kinase doma | 99.96 | |
| 4g3f_A | 336 | NF-kappa-beta-inducing kinase; non-RD kinase, prot | 99.96 | |
| 4b99_A | 398 | Mitogen-activated protein kinase 7; transferase, i | 99.95 | |
| 4g31_A | 299 | Eukaryotic translation initiation factor 2-alpha; | 99.95 | |
| 1ogq_A | 313 | PGIP-2, polygalacturonase inhibiting protein; inhi | 99.95 | |
| 3hmm_A | 303 | TGF-beta receptor type-1; ALK5, kinase, inhibitor, | 99.94 | |
| 4f9c_A | 361 | Cell division cycle 7-related protein kinase; Ser/ | 99.94 | |
| 3uto_A | 573 | Twitchin; kinase, muscle sarcomere, transferase; H | 99.92 | |
| 3v5w_A | 689 | G-protein coupled receptor kinase 2; inhibitor com | 99.91 | |
| 3dbq_A | 343 | Dual specificity protein kinase TTK; MPS1 structur | 99.91 | |
| 3uim_A | 326 | Brassinosteroid insensitive 1-associated receptor; | 99.91 | |
| 3fe3_A | 328 | MAP/microtubule affinity-regulating kinase 3; seri | 99.91 | |
| 2zmd_A | 390 | Dual specificity protein kinase TTK; MPS1, T686A, | 99.91 | |
| 2qkw_B | 321 | Protein kinase; three-helix bundle motif, AVRPTO-P | 99.91 | |
| 4eco_A | 636 | Uncharacterized protein; leucine-rich repeats, pro | 99.91 | |
| 3niz_A | 311 | Rhodanese family protein; structural genomics, str | 99.91 | |
| 2c30_A | 321 | Serine/threonine-protein kinase PAK 6; CRIB domain | 99.91 | |
| 3zgw_A | 347 | Maternal embryonic leucine zipper kinase; transfer | 99.91 | |
| 3p86_A | 309 | Serine/threonine-protein kinase CTR1; ETR1, ERS1, | 99.9 | |
| 3lb7_A | 307 | RAF proto-oncogene serine/threonine-protein kinas; | 99.9 | |
| 2bdw_A | 362 | Hypothetical protein K11E8.1D; kinase, calmodulin | 99.9 | |
| 2psq_A | 370 | Fibroblast growth factor receptor 2; kinase domain | 99.9 | |
| 3vhe_A | 359 | Vascular endothelial growth factor receptor 2; kin | 99.9 | |
| 4ecn_A | 876 | Leucine-rich repeat protein; leucine-rich repeats, | 99.9 | |
| 1o6l_A | 337 | RAC-beta serine/threonine protein kinase; protein | 99.9 | |
| 3o0g_A | 292 | Cell division protein kinase 5; kinase activator c | 99.9 | |
| 3soa_A | 444 | Calcium/calmodulin-dependent protein kinase type a | 99.9 | |
| 1ob3_A | 288 | PFPK5, cell division control protein 2 homolog; tr | 99.9 | |
| 3rgz_A | 768 | Protein brassinosteroid insensitive 1; phytohormon | 99.9 | |
| 3fxz_A | 297 | Serine/threonine-protein kinase PAK 1; transferase | 99.9 | |
| 3p1a_A | 311 | MYT1 kinase, membrane-associated tyrosine- and thr | 99.9 | |
| 2nru_A | 307 | Interleukin-1 receptor-associated kinase 4; inhibi | 99.9 | |
| 3tki_A | 323 | Serine/threonine-protein kinase CHK1; cell checkpo | 99.89 | |
| 3oz6_A | 388 | Mitogen-activated protein kinase 1, serine/threon | 99.89 | |
| 3txo_A | 353 | PKC-L, NPKC-ETA, protein kinase C ETA type; phosph | 99.89 | |
| 4aw2_A | 437 | Serine/threonine-protein kinase MRCK alpha; transf | 99.89 | |
| 3cek_A | 313 | Dual specificity protein kinase TTK; HMPS1, PYT, E | 99.89 | |
| 3og7_A | 289 | AKAP9-BRAF fusion protein; proto-oncogene, V600E, | 99.89 | |
| 2yab_A | 361 | Death-associated protein kinase 2; apoptosis, tran | 99.89 | |
| 4eqm_A | 294 | Protein kinase; transferase; HET: ANP; 3.00A {Stap | 99.89 | |
| 1t46_A | 313 | HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom | 99.89 | |
| 3rgz_A | 768 | Protein brassinosteroid insensitive 1; phytohormon | 99.89 | |
| 3qup_A | 323 | Tyrosine-protein kinase receptor TYRO3; protein ki | 99.89 | |
| 2i0e_A | 353 | Protein kinase C-beta II; serine/threonine protein | 99.89 | |
| 3g33_A | 308 | Cell division protein kinase 4; Ser/Thr protein ki | 99.89 | |
| 3kul_A | 325 | Ephrin type-A receptor 8; ATP-binding, kinase, nuc | 99.89 | |
| 4hcu_A | 269 | Tyrosine-protein kinase ITK/TSK; transferase-trans | 99.89 | |
| 1qcf_A | 454 | Haematopoetic cell kinase (HCK); tyrosine kinase-i | 99.89 | |
| 3s95_A | 310 | LIMK-1, LIM domain kinase 1; structural genomics, | 99.89 | |
| 3ttj_A | 464 | Mitogen-activated protein kinase 10; JNK3, protein | 99.89 | |
| 3tt0_A | 382 | Basic fibroblast growth factor receptor 1; kinase | 99.89 | |
| 2w4o_A | 349 | Calcium/calmodulin-dependent protein kinase type I | 99.89 | |
| 2y0a_A | 326 | Death-associated protein kinase 1; transferase, ca | 99.89 | |
| 1xjd_A | 345 | Protein kinase C, theta type; PKC-theta, ATP, AMP, | 99.89 | |
| 2pmi_A | 317 | Negative RE, cyclin-dependent protein kinase PHO85 | 99.89 | |
| 3soc_A | 322 | Activin receptor type-2A; structural genomics cons | 99.89 | |
| 3poz_A | 327 | Epidermal growth factor receptor; kinase domain, a | 99.89 | |
| 4hgt_A | 296 | Casein kinase I isoform delta; CK1D, inhibitor, tr | 99.89 | |
| 1tki_A | 321 | Titin; serine kinase, muscle, autoinhibition; 2.00 | 99.89 | |
| 3op5_A | 364 | Serine/threonine-protein kinase VRK1; adenosine tr | 99.89 | |
| 2vd5_A | 412 | DMPK protein; serine/threonine-protein kinase, kin | 99.89 | |
| 1csn_A | 298 | Casein kinase-1; phosphotransferase; HET: ATP; 2.0 | 99.89 | |
| 3l9p_A | 367 | Anaplastic lymphoma kinase; kinase domain, ATP-bin | 99.89 | |
| 3uzp_A | 296 | CKI-delta, CKID, casein kinase I isoform delta; CK | 99.89 | |
| 1luf_A | 343 | Muscle-specific tyrosine kinase receptor MUSK; pho | 99.88 | |
| 3kvw_A | 429 | DYRK2, dual specificity tyrosine-phosphorylation-r | 99.88 | |
| 3kk8_A | 284 | Calcium/calmodulin dependent protein kinase II; AT | 99.88 | |
| 3a62_A | 327 | Ribosomal protein S6 kinase beta-1; kinase domain, | 99.88 | |
| 4dc2_A | 396 | Protein kinase C IOTA type; kinase, substrate, cel | 99.88 | |
| 1fot_A | 318 | TPK1 delta, CAMP-dependent protein kinase type 1; | 99.88 | |
| 3a8x_A | 345 | Protein kinase C IOTA type; transferase; HET: TPO; | 99.88 | |
| 3rp9_A | 458 | Mitogen-activated protein kinase; structural genom | 99.88 | |
| 3ork_A | 311 | Serine/threonine protein kinase; structural genomi | 99.88 | |
| 2w5a_A | 279 | Serine/threonine-protein kinase NEK2; Ser/Thr prot | 99.88 | |
| 3v8s_A | 410 | RHO-associated protein kinase 1; dimerization, myo | 99.88 | |
| 3e7e_A | 365 | HBUB1, BUB1A, mitotic checkpoint serine/threonine- | 99.88 | |
| 3gen_A | 283 | Tyrosine-protein kinase BTK; bruton'S tyrosine kin | 99.88 | |
| 2xir_A | 316 | Vascular endothelial growth factor receptor 2; ang | 99.88 | |
| 2eue_A | 275 | Carbon catabolite derepressing protein kinase; kin | 99.88 | |
| 1rjb_A | 344 | FL cytokine receptor; kinase, structure, autoinhib | 99.88 | |
| 3c0i_A | 351 | Peripheral plasma membrane protein CASK; neurexin, | 99.88 | |
| 3gbz_A | 329 | Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide- | 99.88 | |
| 2wqm_A | 310 | Serine/threonine-protein kinase NEK7; ATP-binding, | 99.88 | |
| 4ejn_A | 446 | RAC-alpha serine/threonine-protein kinase; AKT1, a | 99.88 | |
| 4agu_A | 311 | Cyclin-dependent kinase-like 1; transferase, phosp | 99.88 | |
| 4euu_A | 319 | Serine/threonine-protein kinase TBK1; ATP binding, | 99.88 | |
| 2zv2_A | 298 | Calcium/calmodulin-dependent protein kinase kinas; | 99.88 | |
| 3lm5_A | 327 | Serine/threonine-protein kinase 17B; STK17B, serin | 99.88 | |
| 3sxs_A | 268 | Cytoplasmic tyrosine-protein kinase BMX; transfera | 99.88 | |
| 2qol_A | 373 | Ephrin receptor; receptor tyrosine kinase, juxtame | 99.88 | |
| 3cbl_A | 377 | C-FES, proto-oncogene tyrosine-protein kinase FES/ | 99.88 | |
| 2fst_X | 367 | Mitogen-activated protein kinase 14; active mutant | 99.88 | |
| 3brb_A | 313 | Proto-oncogene tyrosine-protein kinase MER; ATP-bi | 99.88 | |
| 1rdq_E | 350 | PKA C-alpha, CAMP-dependent protein kinase, alpha- | 99.88 | |
| 3pg1_A | 362 | Mitogen-activated protein kinase, putative (MAP K | 99.88 | |
| 3gni_B | 389 | Strad alpha; kinase fold, pseudokinase, alpha heli | 99.88 | |
| 1cm8_A | 367 | Phosphorylated MAP kinase P38-gamma; phosphorylati | 99.88 | |
| 2vx3_A | 382 | Dual specificity tyrosine-phosphorylation- regula | 99.88 | |
| 4f0f_A | 287 | Serine/threonine-protein kinase ROCO4; LRRK2, ATP- | 99.88 | |
| 3h4j_B | 336 | AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin | 99.88 | |
| 2x4f_A | 373 | Myosin light chain kinase family member 4; LUNG, b | 99.88 | |
| 1fmk_A | 452 | C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros | 99.88 | |
| 2izr_A | 330 | Casein kinase I isoform gamma-3; serine/threonine- | 99.88 | |
| 1kob_A | 387 | Twitchin; kinase, intrasteric regulation; 2.30A {A | 99.88 | |
| 2r5t_A | 373 | Serine/threonine-protein kinase SGK1; AGC protein | 99.88 | |
| 3pfq_A | 674 | PKC-B, PKC-beta, protein kinase C beta type; phosp | 99.88 | |
| 1u5q_A | 348 | Serine/threonine protein kinase TAO2; transferase; | 99.88 | |
| 3mi9_A | 351 | Cell division protein kinase 9; P-TEFB, HIV-1, pro | 99.88 | |
| 2r3i_A | 299 | Cell division protein kinase 2; serine/threonine-p | 99.88 | |
| 2ivs_A | 314 | Proto-oncogene tyrosine-protein kinase receptor RE | 99.88 | |
| 2yex_A | 276 | Serine/threonine-protein kinase CHK1; transferase, | 99.88 | |
| 3llt_A | 360 | Serine/threonine kinase-1, pflammer; lammer kinase | 99.88 | |
| 1ogq_A | 313 | PGIP-2, polygalacturonase inhibiting protein; inhi | 99.88 | |
| 4fr4_A | 384 | YANK1, serine/threonine-protein kinase 32A; struct | 99.88 | |
| 3n9x_A | 432 | Phosphotransferase; malaria kinase, structural gen | 99.88 | |
| 2xrw_A | 371 | Mitogen-activated protein kinase 8; transcription, | 99.87 | |
| 3qyz_A | 364 | Mitogen-activated protein kinase 1; transferase, s | 99.87 | |
| 2y94_A | 476 | 5'-AMP-activated protein kinase catalytic subunit; | 99.87 | |
| 3sv0_A | 483 | Casein kinase I-like; typical kinase domain fold, | 99.87 | |
| 1opk_A | 495 | P150, C-ABL, proto-oncogene tyrosine-protein kinas | 99.87 | |
| 3i6u_A | 419 | CDS1, serine/threonine-protein kinase CHK2; Ser/Th | 99.87 | |
| 1p4o_A | 322 | Insulin-like growth factor I receptor protein; IGF | 99.87 | |
| 2jii_A | 352 | Serine/threonine-protein kinase VRK3 molecule: VA | 99.87 | |
| 2pvf_A | 334 | Fibroblast growth factor receptor 2; kinase domain | 99.87 | |
| 3lzb_A | 327 | Epidermal growth factor receptor; epidermal growth | 99.87 | |
| 1nxk_A | 400 | MAP kinase-activated protein kinase 2; MK2, phosph | 99.87 | |
| 1k9a_A | 450 | Carboxyl-terminal SRC kinase; COOH-terminal SRC ki | 99.87 | |
| 3t9t_A | 267 | Tyrosine-protein kinase ITK/TSK; kinase domain, al | 99.87 | |
| 3kmu_A | 271 | ILK, integrin-linked kinase; cell adhesion, ANK re | 99.87 | |
| 3q4u_A | 301 | Activin receptor type-1; structural genomics conso | 99.87 | |
| 1mp8_A | 281 | Focal adhesion kinase 1; tyrosine protein kinase, | 99.87 | |
| 3ugc_A | 295 | Tyrosine-protein kinase JAK2; small molecule inhib | 99.87 | |
| 2eva_A | 307 | TAK1 kinase - TAB1 chimera fusion protein; transfe | 99.87 | |
| 3c4z_A | 543 | Rhodopsin kinase; Ser/Thr kinase, RGS homology dom | 99.87 | |
| 2acx_A | 576 | G protein-coupled receptor kinase 6; GRK, G transf | 99.87 | |
| 3fdn_A | 279 | Serine/threonine-protein kinase 6; aurora kinase i | 99.87 | |
| 1qpc_A | 279 | LCK kinase; alpha beta fold, transferase; HET: PTR | 99.87 | |
| 4exu_A | 371 | Mitogen-activated protein kinase 13; P38 kinase, t | 99.87 | |
| 3fme_A | 290 | Dual specificity mitogen-activated protein kinase; | 99.87 | |
| 3mtl_A | 324 | Cell division protein kinase 16; pctaire1, indirub | 99.87 | |
| 4aaa_A | 331 | Cyclin-dependent kinase-like 2; transferase, phosp | 99.87 | |
| 3uc3_A | 361 | Serine/threonine-protein kinase SRK2I; SNRK2, ABA | 99.87 | |
| 2a2a_A | 321 | Death-associated protein kinase 2; autoinhibition, | 99.87 | |
| 3cok_A | 278 | Serine/threonine-protein kinase PLK4; POLO-like ki | 99.87 | |
| 3is5_A | 285 | Calcium-dependent protein kinase; CDPK, structural | 99.87 | |
| 2v62_A | 345 | Serine/threonine-protein kinase VRK2; transferase, | 99.87 | |
| 3an0_A | 340 | Dual specificity mitogen-activated protein kinase; | 99.87 | |
| 1j1b_A | 420 | Glycogen synthase kinase-3 beta; complex, TAU, AMP | 99.87 | |
| 3kfa_A | 288 | Tyrosine-protein kinase ABL1; CML, drug resistance | 99.87 | |
| 2h8h_A | 535 | Proto-oncogene tyrosine-protein kinase SRC; SRC ki | 99.87 | |
| 2rku_A | 294 | Serine/threonine-protein kinase PLK1; structure of | 99.87 | |
| 4fcg_A | 328 | Uncharacterized protein; structural genomics, PSI- | 99.87 | |
| 3cc6_A | 281 | Protein tyrosine kinase 2 beta; focal adhesion kin | 99.87 | |
| 3kex_A | 325 | Receptor tyrosine-protein kinase ERBB-3; kinase do | 99.87 | |
| 3hko_A | 345 | Calcium/calmodulin-dependent protein kinase with d | 99.87 | |
| 3byv_A | 377 | Rhoptry kinase; malaria, transferase, structural g | 99.87 | |
| 2i1m_A | 333 | Macrophage colony-stimulating factor 1 receptor; k | 99.87 | |
| 3nsz_A | 330 | CK II alpha, casein kinase II subunit alpha; inhib | 99.87 | |
| 3qd2_B | 332 | Eukaryotic translation initiation factor 2-alpha; | 99.87 | |
| 3dls_A | 335 | PAS domain-containing serine/threonine-protein KI; | 99.87 | |
| 1blx_A | 326 | Cyclin-dependent kinase 6; inhibitor protein, cycl | 99.87 | |
| 1u59_A | 287 | Tyrosine-protein kinase ZAP-70; transferase; HET: | 99.87 | |
| 1t4h_A | 290 | Serine/threonine-protein kinase WNK1; protein seri | 99.87 | |
| 2owb_A | 335 | Serine/threonine-protein kinase PLK1; catalytic do | 99.87 | |
| 1ua2_A | 346 | CAK, cell division protein kinase 7; cell cycle, p | 99.86 | |
| 2qr7_A | 342 | Ribosomal protein S6 kinase alpha-3; kinase domain | 99.86 | |
| 1vzo_A | 355 | Ribosomal protein S6 kinase alpha 5; protein kinas | 99.86 | |
| 2y7j_A | 365 | Phosphorylase B kinase gamma catalytic chain, test | 99.86 | |
| 3bhy_A | 283 | Death-associated protein kinase 3; death associate | 99.86 | |
| 3a7i_A | 303 | MST3 kinase, serine/threonine kinase 24 (STE20 hom | 99.86 | |
| 3mwu_A | 486 | Calmodulin-domain protein kinase 1; serine/threoni | 99.86 | |
| 2wtk_C | 305 | Serine/threonine-protein kinase 11; transferase-me | 99.86 | |
| 3ll6_A | 337 | Cyclin G-associated kinase; transferase, protein k | 99.86 | |
| 4fvq_A | 289 | Tyrosine-protein kinase JAK2; janus protein kinase | 99.86 | |
| 2yfx_A | 327 | Tyrosine-protein kinase receptor; nucleotide-bindi | 99.86 | |
| 2b9h_A | 353 | MAP kinase FUS3, mitogen-activated protein kinase | 99.86 | |
| 2ozo_A | 613 | Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t | 99.86 | |
| 2vgo_A | 284 | Serine/threonine-protein kinase 12-A; nucleotide-b | 99.86 | |
| 3dzo_A | 413 | Rhoptry kinase domain; parasitic disease, transfer | 99.86 | |
| 1xbb_A | 291 | Tyrosine-protein kinase SYK; gleevec, STI-571, ima | 99.86 | |
| 3rgf_A | 405 | Cyclin-dependent kinase 8; protein kinase complex, | 99.86 | |
| 1z57_A | 339 | Dual specificity protein kinase CLK1; protein tyro | 99.86 | |
| 1wak_A | 397 | Serine/threonine-protein kinase SPRK1; SRPK, trans | 99.86 | |
| 2h34_A | 309 | Serine/threonine-protein kinase PKNE; apoenzyme, t | 99.86 | |
| 3f66_A | 298 | Hepatocyte growth factor receptor; C-Met, protein | 99.86 | |
| 3f3z_A | 277 | Calcium/calmodulin-dependent protein kinase with d | 99.86 | |
| 3nyv_A | 484 | Calmodulin-domain protein kinase 1; serine/threoni | 99.86 | |
| 3pls_A | 298 | Macrophage-stimulating protein receptor; protein k | 99.86 | |
| 3coi_A | 353 | Mitogen-activated protein kinase 13; P38D, P38delt | 99.86 | |
| 3lij_A | 494 | Calcium/calmodulin dependent protein kinase with A | 99.86 | |
| 3c1x_A | 373 | Hepatocyte growth factor receptor; receptor tyrosi | 99.86 | |
| 3q5i_A | 504 | Protein kinase; CDPK, malaria, phosphotransferase, | 99.86 | |
| 3dtc_A | 271 | Mitogen-activated protein kinase kinase kinase 9; | 99.86 | |
| 2x7f_A | 326 | TRAF2 and NCK-interacting protein kinase; serine/t | 99.86 | |
| 3kn6_A | 325 | Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1 | 99.86 | |
| 1mqb_A | 333 | Ephrin type-A receptor 2; tyrosine protein kinase, | 99.86 | |
| 3e3p_A | 360 | Protein kinase, putative glycogen synthase kinase; | 99.86 | |
| 2buj_A | 317 | Serine/threonine-protein kinase 16; transferase, A | 99.85 | |
| 2h6d_A | 276 | 5'-AMP-activated protein kinase catalytic subunit | 99.85 | |
| 4fl3_A | 635 | Tyrosine-protein kinase SYK; transferase; HET: ANP | 99.85 | |
| 3eb0_A | 383 | Putative uncharacterized protein; kinase cryptospo | 99.85 | |
| 2eu9_A | 355 | Dual specificity protein kinase CLK3; kinase domai | 99.85 | |
| 4eut_A | 396 | Serine/threonine-protein kinase TBK1; ATP binding, | 99.85 | |
| 3lxp_A | 318 | Non-receptor tyrosine-protein kinase TYK2; JAK3, i | 99.85 | |
| 1x8b_A | 289 | WEE1HU, WEE1-like protein kinase; cell cycle, tran | 99.85 | |
| 3eqc_A | 360 | Dual specificity mitogen-activated protein kinase; | 99.85 | |
| 3com_A | 314 | Serine/threonine-protein kinase 4; MST1, STE20-lik | 99.85 | |
| 2i6l_A | 320 | Mitogen-activated protein kinase 6; MAPK6, ERK3, e | 99.85 | |
| 2clq_A | 295 | Mitogen-activated protein kinase kinase kinase 5; | 99.85 | |
| 2ycf_A | 322 | Serine/threonine-protein kinase CHK2; transferase, | 99.85 | |
| 3lxl_A | 327 | Tyrosine-protein kinase JAK3; TYK2, inflammation, | 99.85 | |
| 3aln_A | 327 | Dual specificity mitogen-activated protein kinase; | 99.85 | |
| 2ac3_A | 316 | MAP kinase-interacting serine/threonine kinase 2; | 99.85 | |
| 2jam_A | 304 | Calcium/calmodulin-dependent protein kinase type 1 | 99.85 | |
| 4e5w_A | 302 | Tyrosine-protein kinase JAK1; kinase domain, trans | 99.85 | |
| 2wei_A | 287 | Calmodulin-domain protein kinase 1, putative; nucl | 99.85 | |
| 1byg_A | 278 | CSK, protein (C-terminal SRC kinase); protein kina | 99.85 | |
| 3fhr_A | 336 | MAP kinase-activated protein kinase 3; kinase-inhi | 99.85 | |
| 3a99_A | 320 | Proto-oncogene serine/threonine-protein kinase PI; | 99.85 | |
| 2vwi_A | 303 | Serine/threonine-protein kinase OSR1; STE kinase, | 99.84 | |
| 4e7w_A | 394 | Glycogen synthase kinase 3; GSK3, PTyr195, transfe | 99.84 | |
| 1phk_A | 298 | Phosphorylase kinase; glycogen metabolism, transfe | 99.84 | |
| 3mdy_A | 337 | Bone morphogenetic protein receptor type-1B; compl | 99.84 | |
| 2a19_B | 284 | Interferon-induced, double-stranded RNA-activated | 99.84 | |
| 3g2f_A | 336 | Bone morphogenetic protein receptor type-2; kinase | 99.84 | |
| 2dyl_A | 318 | Dual specificity mitogen-activated protein kinase | 99.84 | |
| 1q8y_A | 373 | SR protein kinase; transferase; HET: ADP ADE; 2.05 | 99.84 | |
| 2w1i_A | 326 | JAK2; chromosomal rearrangement, nucleotide-bindin | 99.84 | |
| 2pml_X | 348 | PFPK7, Ser/Thr protein kinase; phosphorylati trans | 99.84 | |
| 1u46_A | 291 | ACK-1, activated CDC42 kinase 1; tyrosine kinase, | 99.84 | |
| 1fvr_A | 327 | Tyrosine-protein kinase TIE-2; tyrosine kinase, tr | 99.84 | |
| 2j0j_A | 656 | Focal adhesion kinase 1; cell migration, FERM, tra | 99.84 | |
| 3q60_A | 371 | ROP5B; pseudokinase, transferase; HET: ATP; 1.72A | 99.84 | |
| 2j7t_A | 302 | Serine/threonine-protein kinase 10; transferase, A | 99.83 | |
| 1b6c_B | 342 | TGF-B superfamily receptor type I; complex (isomer | 99.83 | |
| 2iwi_A | 312 | Serine/threonine-protein kinase PIM-2; nucleotide- | 99.83 | |
| 2y4i_B | 319 | KSR2, HKSR2, kinase suppressor of RAS 2; transfera | 99.83 | |
| 2rio_A | 434 | Serine/threonine-protein kinase/endoribonuclease I | 99.82 | |
| 3gxj_A | 303 | TGF-beta receptor type-1; ALK5, kinase, inhibitor, | 99.82 | |
| 1zy4_A | 303 | Serine/threonine-protein kinase GCN2; translation | 99.81 | |
| 4fcg_A | 328 | Uncharacterized protein; structural genomics, PSI- | 99.8 | |
| 3p23_A | 432 | Serine/threonine-protein kinase/endoribonuclease; | 99.8 | |
| 3m19_A | 251 | Variable lymphocyte receptor A diversity region; a | 99.8 | |
| 3e6j_A | 229 | Variable lymphocyte receptor diversity region; var | 99.78 | |
| 2o6s_A | 208 | Variable lymphocyte receptor B; leucine-rich repea | 99.77 | |
| 2pzi_A | 681 | Probable serine/threonine-protein kinase PKNG; ATP | 99.77 | |
| 3qa8_A | 676 | MGC80376 protein; kinase ubiquitin-like domain, ph | 99.76 | |
| 2o6q_A | 270 | Variable lymphocyte receptor A; leucine-rich repea | 99.76 | |
| 4eco_A | 636 | Uncharacterized protein; leucine-rich repeats, pro | 99.76 | |
| 1ozn_A | 285 | Reticulon 4 receptor; NOGO receptor, MAD, myelinat | 99.76 | |
| 4ecn_A | 876 | Leucine-rich repeat protein; leucine-rich repeats, | 99.75 | |
| 3v47_A | 455 | TOLL-like receptor 5B and variable lymphocyte REC | 99.75 | |
| 2z66_A | 306 | Variable lymphocyte receptor B, TOLL-like recepto; | 99.74 | |
| 3rfs_A | 272 | Internalin B, repeat modules, variable lymphocyte | 99.73 | |
| 3m19_A | 251 | Variable lymphocyte receptor A diversity region; a | 99.73 | |
| 3v47_A | 455 | TOLL-like receptor 5B and variable lymphocyte REC | 99.73 | |
| 1ozn_A | 285 | Reticulon 4 receptor; NOGO receptor, MAD, myelinat | 99.72 | |
| 2v70_A | 220 | SLIT-2, SLIT homolog 2 protein N-product; neurogen | 99.72 | |
| 1wwl_A | 312 | Monocyte differentiation antigen CD14; LPS, immune | 99.72 | |
| 3t6q_A | 606 | CD180 antigen; protein-protein complex, leucine ri | 99.72 | |
| 1p9a_G | 290 | Platelet glycoprotein IB alpha chain precursor; pl | 99.72 | |
| 2o6q_A | 270 | Variable lymphocyte receptor A; leucine-rich repea | 99.72 | |
| 2v9t_B | 220 | SLIT homolog 2 protein N-product; structural prote | 99.72 | |
| 2z66_A | 306 | Variable lymphocyte receptor B, TOLL-like recepto; | 99.71 | |
| 3rfs_A | 272 | Internalin B, repeat modules, variable lymphocyte | 99.71 | |
| 3m2w_A | 299 | MAP kinase-activated protein kinase 2; small molec | 99.7 | |
| 2v9t_B | 220 | SLIT homolog 2 protein N-product; structural prote | 99.7 | |
| 2z62_A | 276 | TOLL-like receptor 4, variable lymphocyte recepto; | 99.69 | |
| 2z62_A | 276 | TOLL-like receptor 4, variable lymphocyte recepto; | 99.69 | |
| 3zyj_A | 440 | Leucine-rich repeat-containing protein 4C; cell ad | 99.69 | |
| 3oja_B | 597 | Anopheles plasmodium-responsive leucine-rich REPE | 99.69 | |
| 3zyi_A | 452 | Leucine-rich repeat-containing protein 4; cell adh | 99.69 | |
| 2z81_A | 549 | CD282 antigen, TOLL-like receptor 2, variable lymp | 99.68 | |
| 2v70_A | 220 | SLIT-2, SLIT homolog 2 protein N-product; neurogen | 99.68 | |
| 3uqc_A | 286 | Probable conserved transmembrane protein; structur | 99.68 | |
| 1jl5_A | 454 | Outer protein YOPM; leucine-rich repeat, molecular | 99.68 | |
| 2z63_A | 570 | TOLL-like receptor 4, variable lymphocyte recepto; | 99.67 | |
| 3zyj_A | 440 | Leucine-rich repeat-containing protein 4C; cell ad | 99.67 | |
| 3oja_A | 487 | Leucine-rich immune molecule 1; coiled-coil, helix | 99.67 | |
| 1xku_A | 330 | Decorin; proteoglycan, leucine-rich repeat, struct | 99.67 | |
| 1p9a_G | 290 | Platelet glycoprotein IB alpha chain precursor; pl | 99.67 | |
| 3vq2_A | 606 | TLR4, TOLL-like receptor 4; leucine rich repeat MD | 99.67 | |
| 3e6j_A | 229 | Variable lymphocyte receptor diversity region; var | 99.67 | |
| 1wwl_A | 312 | Monocyte differentiation antigen CD14; LPS, immune | 99.67 | |
| 1xku_A | 330 | Decorin; proteoglycan, leucine-rich repeat, struct | 99.66 | |
| 3zyi_A | 452 | Leucine-rich repeat-containing protein 4; cell adh | 99.66 | |
| 2id5_A | 477 | Lingo-1, leucine rich repeat neuronal 6A; CNS-spec | 99.66 | |
| 3oja_A | 487 | Leucine-rich immune molecule 1; coiled-coil, helix | 99.66 | |
| 2z7x_B | 520 | TOLL-like receptor 1, variable lymphocyte recepto; | 99.66 | |
| 2ft3_A | 332 | Biglycan; proteoglycan, dimer interface, structura | 99.66 | |
| 2vuw_A | 336 | Serine/threonine-protein kinase haspin; cell cycle | 99.66 | |
| 2xot_A | 361 | Amphoterin-induced protein 1; cell adhesion, neuro | 99.66 | |
| 3t6q_A | 606 | CD180 antigen; protein-protein complex, leucine ri | 99.66 | |
| 1w8a_A | 192 | SLIT protein; signaling protein, secreted protein, | 99.65 | |
| 2ft3_A | 332 | Biglycan; proteoglycan, dimer interface, structura | 99.65 | |
| 3oja_B | 597 | Anopheles plasmodium-responsive leucine-rich REPE | 99.65 | |
| 3o6n_A | 390 | APL1; leucine-rich repeat, protein binding; HET: N | 99.65 | |
| 2z7x_B | 520 | TOLL-like receptor 1, variable lymphocyte recepto; | 99.65 | |
| 3vq2_A | 606 | TLR4, TOLL-like receptor 4; leucine rich repeat MD | 99.65 | |
| 3a79_B | 562 | TLR6, VLRB.59, TOLL-like receptor 6, variable lymp | 99.65 | |
| 4glp_A | 310 | Monocyte differentiation antigen CD14; alpha beta | 99.64 | |
| 2z80_A | 353 | TOLL-like receptor 2, variable lymphocyte recepto; | 99.64 | |
| 2z80_A | 353 | TOLL-like receptor 2, variable lymphocyte recepto; | 99.64 | |
| 2id5_A | 477 | Lingo-1, leucine rich repeat neuronal 6A; CNS-spec | 99.64 | |
| 3j0a_A | 844 | TOLL-like receptor 5; membrane protein, leucine-ri | 99.64 | |
| 3cvr_A | 571 | Invasion plasmid antigen; leucine rich repeat and | 99.63 | |
| 1ziw_A | 680 | TOLL-like receptor 3; innate immunity, immune syst | 99.63 | |
| 3o6n_A | 390 | APL1; leucine-rich repeat, protein binding; HET: N | 99.63 | |
| 2o6s_A | 208 | Variable lymphocyte receptor B; leucine-rich repea | 99.62 | |
| 4b8c_D | 727 | Glucose-repressible alcohol dehydrogenase transcr | 99.62 | |
| 3j0a_A | 844 | TOLL-like receptor 5; membrane protein, leucine-ri | 99.62 | |
| 4glp_A | 310 | Monocyte differentiation antigen CD14; alpha beta | 99.62 | |
| 2xwt_C | 239 | Thyrotropin receptor; signaling protein-immune sys | 99.61 | |
| 3a79_B | 562 | TLR6, VLRB.59, TOLL-like receptor 6, variable lymp | 99.61 | |
| 2o6r_A | 177 | Variable lymphocyte receptor B; leucine-rich repea | 99.61 | |
| 2z81_A | 549 | CD282 antigen, TOLL-like receptor 2, variable lymp | 99.61 | |
| 1w8a_A | 192 | SLIT protein; signaling protein, secreted protein, | 99.61 | |
| 4g8a_A | 635 | TOLL-like receptor 4; leucine rich repeat MD-2 rel | 99.61 | |
| 3o53_A | 317 | Protein LRIM1, AGAP006348-PA; leucine-rich repeat, | 99.61 | |
| 4ezg_A | 197 | Putative uncharacterized protein; internalin-A, le | 99.6 | |
| 1jl5_A | 454 | Outer protein YOPM; leucine-rich repeat, molecular | 99.6 | |
| 1ziw_A | 680 | TOLL-like receptor 3; innate immunity, immune syst | 99.6 | |
| 2xwt_C | 239 | Thyrotropin receptor; signaling protein-immune sys | 99.59 | |
| 3cvr_A | 571 | Invasion plasmid antigen; leucine rich repeat and | 99.59 | |
| 2ell_A | 168 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 99.58 | |
| 2wfh_A | 193 | SLIT homolog 2 protein C-product; developmental pr | 99.57 | |
| 3bz5_A | 457 | Internalin-J, INLJ; leucine rich repeat (LRR), cys | 99.57 | |
| 3o53_A | 317 | Protein LRIM1, AGAP006348-PA; leucine-rich repeat, | 99.57 | |
| 1h6u_A | 308 | Internalin H; cell adhesion, leucine rich repeat, | 99.56 | |
| 1m9s_A | 605 | Internalin B; cell invasion, GW domains, SH3 domai | 99.55 | |
| 4g8a_A | 635 | TOLL-like receptor 4; leucine rich repeat MD-2 rel | 99.55 | |
| 2xot_A | 361 | Amphoterin-induced protein 1; cell adhesion, neuro | 99.55 | |
| 2je0_A | 149 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 99.53 | |
| 2z63_A | 570 | TOLL-like receptor 4, variable lymphocyte recepto; | 99.53 | |
| 3bz5_A | 457 | Internalin-J, INLJ; leucine rich repeat (LRR), cys | 99.52 | |
| 4fmz_A | 347 | Internalin; leucine rich repeat, structural genomi | 99.51 | |
| 1o6v_A | 466 | Internalin A; bacterial infection, extracellular r | 99.51 | |
| 3g06_A | 622 | SSPH2 (leucine-rich repeat protein); E3 ubiquitin | 99.5 | |
| 1o6v_A | 466 | Internalin A; bacterial infection, extracellular r | 99.5 | |
| 2wfh_A | 193 | SLIT homolog 2 protein C-product; developmental pr | 99.49 | |
| 3g06_A | 622 | SSPH2 (leucine-rich repeat protein); E3 ubiquitin | 99.49 | |
| 3g39_A | 170 | Variable lymphocyte receptor VLRB.2D; antibody, X- | 99.48 | |
| 1dce_A | 567 | Protein (RAB geranylgeranyltransferase alpha subun | 99.48 | |
| 1xeu_A | 263 | Internalin C; cellular invasion, leucine-rich repe | 99.48 | |
| 4b8c_D | 727 | Glucose-repressible alcohol dehydrogenase transcr | 99.48 | |
| 2ell_A | 168 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 99.48 | |
| 2o6r_A | 177 | Variable lymphocyte receptor B; leucine-rich repea | 99.47 | |
| 4ezg_A | 197 | Putative uncharacterized protein; internalin-A, le | 99.47 | |
| 1h6u_A | 308 | Internalin H; cell adhesion, leucine rich repeat, | 99.47 | |
| 2r9u_A | 174 | Variable lymphocyte receptor; adaptive immunity, V | 99.46 | |
| 1h6t_A | 291 | Internalin B; cell adhesion, leucine rich repeat, | 99.46 | |
| 1h6t_A | 291 | Internalin B; cell adhesion, leucine rich repeat, | 99.45 | |
| 2je0_A | 149 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 99.43 | |
| 4fmz_A | 347 | Internalin; leucine rich repeat, structural genomi | 99.42 | |
| 1m9s_A | 605 | Internalin B; cell invasion, GW domains, SH3 domai | 99.42 | |
| 2ca6_A | 386 | RAN GTPase-activating protein 1; GAP, GTPase activ | 99.42 | |
| 1dce_A | 567 | Protein (RAB geranylgeranyltransferase alpha subun | 99.4 | |
| 4ay9_X | 350 | Follicle-stimulating hormone receptor; hormone-rec | 99.4 | |
| 4ay9_X | 350 | Follicle-stimulating hormone receptor; hormone-rec | 99.4 | |
| 1a9n_A | 176 | U2A', U2A'; complex (nuclear protein/RNA), RNA, sn | 99.39 | |
| 1ds9_A | 198 | Outer arm dynein; leucine-rich repeat, beta-BETA-a | 99.38 | |
| 2ca6_A | 386 | RAN GTPase-activating protein 1; GAP, GTPase activ | 99.38 | |
| 1xeu_A | 263 | Internalin C; cellular invasion, leucine-rich repe | 99.36 | |
| 1a9n_A | 176 | U2A', U2A'; complex (nuclear protein/RNA), RNA, sn | 99.35 | |
| 2r9u_A | 174 | Variable lymphocyte receptor; adaptive immunity, V | 99.32 | |
| 3g39_A | 170 | Variable lymphocyte receptor VLRB.2D; antibody, X- | 99.32 | |
| 2ifg_A | 347 | High affinity nerve growth factor receptor; TRK, T | 99.26 | |
| 2ast_B | 336 | S-phase kinase-associated protein 2; SCF-substrate | 99.22 | |
| 2ast_B | 336 | S-phase kinase-associated protein 2; SCF-substrate | 99.22 | |
| 3goz_A | 362 | Leucine-rich repeat-containing protein; LEGL7, NES | 99.18 | |
| 1ds9_A | 198 | Outer arm dynein; leucine-rich repeat, beta-BETA-a | 99.13 | |
| 3goz_A | 362 | Leucine-rich repeat-containing protein; LEGL7, NES | 99.11 | |
| 2ifg_A | 347 | High affinity nerve growth factor receptor; TRK, T | 99.1 | |
| 1z7x_W | 461 | Ribonuclease inhibitor; leucine-rich repeat, enzym | 99.08 | |
| 3en9_A | 540 | Glycoprotease, O-sialoglycoprotein endopeptidase/p | 99.02 | |
| 4azs_A | 569 | Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15 | 99.0 | |
| 1z7x_W | 461 | Ribonuclease inhibitor; leucine-rich repeat, enzym | 98.93 | |
| 3un9_A | 372 | NLR family member X1; leucine rich repeat (LRR), a | 98.73 | |
| 3un9_A | 372 | NLR family member X1; leucine rich repeat (LRR), a | 98.71 | |
| 3rw6_A | 267 | Nuclear RNA export factor 1; retroviral constituti | 98.69 | |
| 3ogk_B | 592 | Coronatine-insensitive protein 1; leucine rich rep | 98.62 | |
| 1zar_A | 282 | RIO2 kinase; serine kinase, winged-helix, RIO doma | 98.56 | |
| 3sb4_A | 329 | Hypothetical leucine rich repeat protein; LRR, rig | 98.55 | |
| 3sb4_A | 329 | Hypothetical leucine rich repeat protein; LRR, rig | 98.54 | |
| 3rw6_A | 267 | Nuclear RNA export factor 1; retroviral constituti | 98.3 | |
| 2p1m_B | 594 | Transport inhibitor response 1 protein; F-BOX, leu | 98.3 | |
| 3ogk_B | 592 | Coronatine-insensitive protein 1; leucine rich rep | 98.29 | |
| 2ra8_A | 362 | Uncharacterized protein Q64V53_bacfr; WGR domain, | 98.07 | |
| 1io0_A | 185 | Tropomodulin; LRR protein, right-handed super-heli | 97.9 | |
| 2p1m_B | 594 | Transport inhibitor response 1 protein; F-BOX, leu | 97.83 | |
| 4fdw_A | 401 | Leucine rich hypothetical protein; putative cell s | 97.8 | |
| 2ra8_A | 362 | Uncharacterized protein Q64V53_bacfr; WGR domain, | 97.8 | |
| 1io0_A | 185 | Tropomodulin; LRR protein, right-handed super-heli | 97.75 | |
| 4fdw_A | 401 | Leucine rich hypothetical protein; putative cell s | 97.71 | |
| 3rfe_A | 130 | Platelet glycoprotein IB beta chain; platelet surf | 97.35 | |
| 3rfe_A | 130 | Platelet glycoprotein IB beta chain; platelet surf | 96.84 | |
| 4fs7_A | 394 | Uncharacterized protein; leucine-rich repeats, pro | 95.88 | |
| 1zth_A | 258 | RIO1 serine protein kinase; ribosome biogenesis, r | 95.86 | |
| 4h09_A | 379 | Hypothetical leucine rich repeat protein; two LRR_ | 94.75 | |
| 2ks1_B | 44 | Epidermal growth factor receptor; ERBB1, ERBB2, tr | 94.7 | |
| 2l2t_A | 44 | Receptor tyrosine-protein kinase ERBB-4; transmemb | 94.63 | |
| 4gyi_A | 397 | RIO2 kinase; protein kinase, ADP complex, phosphoa | 94.61 | |
| 4gt6_A | 394 | Cell surface protein; leucine rich repeats, putati | 94.55 | |
| 3e4g_A | 176 | ATP synthase subunit S, mitochondrial; leucine-ric | 94.43 | |
| 3e4g_A | 176 | ATP synthase subunit S, mitochondrial; leucine-ric | 94.42 | |
| 1pgv_A | 197 | TMD-1, tropomodulin TMD-1; structural genomics, PS | 93.97 | |
| 1pgv_A | 197 | TMD-1, tropomodulin TMD-1; structural genomics, PS | 92.98 | |
| 4gt6_A | 394 | Cell surface protein; leucine rich repeats, putati | 92.65 | |
| 2jwa_A | 44 | Receptor tyrosine-protein kinase ERBB-2; transmemb | 92.19 | |
| 4fs7_A | 394 | Uncharacterized protein; leucine-rich repeats, pro | 91.77 | |
| 4h09_A | 379 | Hypothetical leucine rich repeat protein; two LRR_ | 91.72 | |
| 2k1k_A | 38 | Ephrin type-A receptor 1; EPHA1, receptor tyrosine | 90.12 |
| >4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=6.8e-32 Score=276.28 Aligned_cols=204 Identities=22% Similarity=0.281 Sum_probs=155.5
Q ss_pred CCcccceeecCCCceEEEEEEec------CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc-------------------
Q 042825 418 NNFSEENRLGRGGVGTVYKGELK------DGTEVGVKRMELGSVTEQGIAQFESEITVLTK------------------- 472 (631)
Q Consensus 418 ~~f~~~~~iG~G~fg~Vyk~~~~------~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~------------------- 472 (631)
++|...+.||+|+||+||+|++. +++.||||+++.. .....++|.+|+++|++
T Consensus 13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~--~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~ 90 (299)
T 4asz_A 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDA--SDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPL 90 (299)
T ss_dssp GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSC--CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSE
T ss_pred HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCC--ChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEE
Confidence 46778899999999999999864 4788999999754 45567889999999987
Q ss_pred ---------CChhHHhHhhh--------hcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEE
Q 042825 473 ---------GTLGRHLFNWE--------EEGLEPLEWNTRLNIALDVARG------------------------DDMRVA 511 (631)
Q Consensus 473 ---------gsL~~~L~~~~--------~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~ 511 (631)
|+|.++|+... ......++|.++++|+.++|+| ..+||+
T Consensus 91 ~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDlKp~NILl~~~~~~Ki~ 170 (299)
T 4asz_A 91 IMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKIG 170 (299)
T ss_dssp EEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEEC
T ss_pred EEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCccCHhhEEECCCCcEEEC
Confidence 89999997532 1234579999999999999988 467999
Q ss_pred eeccccccCCCCccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChHHHHHHHHHhH-
Q 042825 512 DFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT-GRKVVDATHSDPEYIIHLATWFQ- 589 (631)
Q Consensus 512 DFGla~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~Ellt-G~~P~~~~~~~~~~~~~l~~~~~- 589 (631)
|||+|+...............||++|||||++.+..|+.|+|||||||+||||+| |+.||.+....+ ....+..-..
T Consensus 171 DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~~-~~~~i~~~~~~ 249 (299)
T 4asz_A 171 DFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNE-VIECITQGRVL 249 (299)
T ss_dssp CCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHH-HHHHHHHTCCC
T ss_pred CcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHH-HHHHHHcCCCC
Confidence 9999997653332233344679999999999999999999999999999999999 899998654221 1111111110
Q ss_pred -hhhcCChhHHHHHHhhcCCChhhHHhHHHHHHHHH
Q 042825 590 -KMHKNHDTFQMAIDKTIQLDEENLANVSTVAELGD 624 (631)
Q Consensus 590 -~~~~~~~~l~~~id~~L~~d~~~r~~~~~vl~lal 624 (631)
.....++++.+++.+|+..||++||++.++.+.--
T Consensus 250 ~~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~ 285 (299)
T 4asz_A 250 QRPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQ 285 (299)
T ss_dssp CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHH
Confidence 11122468999999999999999999999876543
|
| >3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.5e-31 Score=273.92 Aligned_cols=200 Identities=23% Similarity=0.388 Sum_probs=149.8
Q ss_pred cCCcccceeecCCCceEEEEEEecCCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc------------------------
Q 042825 417 TNNFSEENRLGRGGVGTVYKGELKDGTEVGVKRMELGSVTEQGIAQFESEITVLTK------------------------ 472 (631)
Q Consensus 417 t~~f~~~~~iG~G~fg~Vyk~~~~~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~------------------------ 472 (631)
.++|...+.||+|+||+||+|+++ ..||||+++.........++|.+|+++|++
T Consensus 35 ~~~l~l~~~iG~G~fG~Vy~~~~~--~~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~iVmEy 112 (307)
T 3omv_A 35 ASEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTKDNLAIVTQW 112 (307)
T ss_dssp TTSCCEEEECCCCSSSEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSCEEEEEC
T ss_pred HHHeEEeeEEeeCCCcEEEEEEEC--CcEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEECCeEEEEEEc
Confidence 346777899999999999999975 369999998766666778899999999987
Q ss_pred ---CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCCcc
Q 042825 473 ---GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENGKH 525 (631)
Q Consensus 473 ---gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~~~ 525 (631)
|+|.++|+. ....++|.++++|+.++|+| +.+||+|||+|+........
T Consensus 113 ~~gGsL~~~l~~----~~~~l~~~~~~~i~~qia~gL~yLH~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~ 188 (307)
T 3omv_A 113 CEGSSLYKHLHV----QETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGS 188 (307)
T ss_dssp CSSCBHHHHHHT----SCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCSSSEEEETTEEEEECCCSSCBC-------
T ss_pred CCCCCHHHHHhh----cCCCCCHHHHHHHHHHHHHHHHHHHHCCccCCccCHHHEEECCCCcEEEeeccCceecccCCcc
Confidence 888888853 23469999999999999988 35789999999977533333
Q ss_pred ccccccccCccccccccccc---CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHhHh-----h-hcCCh
Q 042825 526 SILTKVAGTFGYLAPEYIVT---GRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQK-----M-HKNHD 596 (631)
Q Consensus 526 ~~~~~~~gt~~Y~aPE~~~~---~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~~~-----~-~~~~~ 596 (631)
......+||+.|||||++.+ ..|+.++|||||||+||||+||+.||.+..........+..-... . ...++
T Consensus 189 ~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 268 (307)
T 3omv_A 189 QQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPDLSKLYKNCPK 268 (307)
T ss_dssp -----CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHTTCCCCCSTTSCTTSCH
T ss_pred eeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHHHHHHHHhcCCCCCCcccccccchH
Confidence 34556789999999999864 459999999999999999999999998654332111111111100 0 11246
Q ss_pred hHHHHHHhhcCCChhhHHhHHHHHHH
Q 042825 597 TFQMAIDKTIQLDEENLANVSTVAEL 622 (631)
Q Consensus 597 ~l~~~id~~L~~d~~~r~~~~~vl~l 622 (631)
++.+++.+|+..||++||++.++++.
T Consensus 269 ~l~~li~~cl~~dP~~RPs~~ei~~~ 294 (307)
T 3omv_A 269 AMKRLVADCVKKVKEERPLFPQILSS 294 (307)
T ss_dssp HHHHHHHHHTCSSSTTSCCHHHHHHH
T ss_pred HHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence 78999999999999999999998763
|
| >4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.7e-31 Score=277.10 Aligned_cols=204 Identities=22% Similarity=0.299 Sum_probs=148.4
Q ss_pred CCcccceeecCCCceEEEEEEec------CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc-------------------
Q 042825 418 NNFSEENRLGRGGVGTVYKGELK------DGTEVGVKRMELGSVTEQGIAQFESEITVLTK------------------- 472 (631)
Q Consensus 418 ~~f~~~~~iG~G~fg~Vyk~~~~------~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~------------------- 472 (631)
++|...+.||+|+||+||+|+++ +++.||||+++.. .....++|.+|+++|.+
T Consensus 41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~--~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~ 118 (329)
T 4aoj_A 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEA--SESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPL 118 (329)
T ss_dssp GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCC--SHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSE
T ss_pred HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcC--CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEE
Confidence 45677889999999999999864 4789999999754 45567889999999987
Q ss_pred ---------CChhHHhHhhhh----------cCCCCCCHHHHHHHHHHhhcC------------------------CCcE
Q 042825 473 ---------GTLGRHLFNWEE----------EGLEPLEWNTRLNIALDVARG------------------------DDMR 509 (631)
Q Consensus 473 ---------gsL~~~L~~~~~----------~~~~~L~~~~~~~I~~~ia~g------------------------~~~k 509 (631)
|+|.++++.... .....++|.++++|+.++|+| ..+|
T Consensus 119 ~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLKp~NILl~~~~~~K 198 (329)
T 4aoj_A 119 LMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVK 198 (329)
T ss_dssp EEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTTEEE
T ss_pred EEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHhhEEECCCCcEE
Confidence 899998875321 113469999999999999988 4579
Q ss_pred EEeeccccccCCCCccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChHHHHHHHHHh
Q 042825 510 VADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT-GRKVVDATHSDPEYIIHLATWF 588 (631)
Q Consensus 510 l~DFGla~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~Ellt-G~~P~~~~~~~~~~~~~l~~~~ 588 (631)
|+|||+|+.+............+||+.|||||++.+..|+.++|||||||+||||+| |+.||.+....+ ....+..-.
T Consensus 199 i~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~~-~~~~i~~g~ 277 (329)
T 4aoj_A 199 IGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTE-AIDCITQGR 277 (329)
T ss_dssp ECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHHH-HHHHHHHTC
T ss_pred EcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCHHH-HHHHHHcCC
Confidence 999999998753333334456789999999999999999999999999999999999 899998653221 111111111
Q ss_pred H--hhhcCChhHHHHHHhhcCCChhhHHhHHHHHHHHH
Q 042825 589 Q--KMHKNHDTFQMAIDKTIQLDEENLANVSTVAELGD 624 (631)
Q Consensus 589 ~--~~~~~~~~l~~~id~~L~~d~~~r~~~~~vl~lal 624 (631)
+ .....++++.+++.+|+..||++||++.++++.--
T Consensus 278 ~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~ 315 (329)
T 4aoj_A 278 ELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQ 315 (329)
T ss_dssp CCCCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHH
T ss_pred CCCCcccccHHHHHHHHHHcCcChhHCcCHHHHHHHHH
Confidence 1 11123468999999999999999999999887533
|
| >4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A | Back alignment and structure |
|---|
Probab=99.97 E-value=1.1e-31 Score=276.00 Aligned_cols=198 Identities=18% Similarity=0.246 Sum_probs=153.3
Q ss_pred CcccceeecCCCceEEEEEEec------CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc--------------------
Q 042825 419 NFSEENRLGRGGVGTVYKGELK------DGTEVGVKRMELGSVTEQGIAQFESEITVLTK-------------------- 472 (631)
Q Consensus 419 ~f~~~~~iG~G~fg~Vyk~~~~------~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~-------------------- 472 (631)
+++..+.||+|+||+||+|++. +++.||||+++... .....++|.+|+.++.+
T Consensus 27 ~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~-~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~ 105 (308)
T 4gt4_A 27 AVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKA-EGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLS 105 (308)
T ss_dssp GEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-C-CC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCE
T ss_pred HCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECccc-ChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEE
Confidence 3456689999999999999863 46899999997543 23356789999999976
Q ss_pred --------CChhHHhHhhhh-----------cCCCCCCHHHHHHHHHHhhcC------------------------CCcE
Q 042825 473 --------GTLGRHLFNWEE-----------EGLEPLEWNTRLNIALDVARG------------------------DDMR 509 (631)
Q Consensus 473 --------gsL~~~L~~~~~-----------~~~~~L~~~~~~~I~~~ia~g------------------------~~~k 509 (631)
|+|.++|+.... .....++|..+++|+.++|+| +.+|
T Consensus 106 lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLK~~NILl~~~~~~K 185 (308)
T 4gt4_A 106 MIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVK 185 (308)
T ss_dssp EEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEE
T ss_pred EEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCccccceEECCCCCEE
Confidence 899999964321 112469999999999999998 4679
Q ss_pred EEeeccccccCCCCccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChHHHHHHHHHh
Q 042825 510 VADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT-GRKVVDATHSDPEYIIHLATWF 588 (631)
Q Consensus 510 l~DFGla~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~Ellt-G~~P~~~~~~~~~~~~~l~~~~ 588 (631)
|+|||+|+.+............+||++|||||++.++.|+.++|||||||+||||+| |+.||.+.... . +...+
T Consensus 186 i~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~--~---~~~~i 260 (308)
T 4gt4_A 186 ISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQ--D---VVEMI 260 (308)
T ss_dssp ECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCHH--H---HHHHH
T ss_pred ECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCHH--H---HHHHH
Confidence 999999997753333334456789999999999999999999999999999999999 89999865422 1 22222
Q ss_pred Hhh------hcCChhHHHHHHhhcCCChhhHHhHHHHHHH
Q 042825 589 QKM------HKNHDTFQMAIDKTIQLDEENLANVSTVAEL 622 (631)
Q Consensus 589 ~~~------~~~~~~l~~~id~~L~~d~~~r~~~~~vl~l 622 (631)
... ...++++.+++.+|+..||.+||++.++++.
T Consensus 261 ~~~~~~~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~ 300 (308)
T 4gt4_A 261 RNRQVLPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSR 300 (308)
T ss_dssp HTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HcCCCCCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence 111 1124678999999999999999999998764
|
| >4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.7e-31 Score=277.67 Aligned_cols=199 Identities=16% Similarity=0.303 Sum_probs=151.7
Q ss_pred cCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc-----------------------
Q 042825 417 TNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK----------------------- 472 (631)
Q Consensus 417 t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~----------------------- 472 (631)
.++|+..+.||+|+||+||+|+.. +|+.||||++..........++|.+|+++|++
T Consensus 23 me~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVm 102 (350)
T 4b9d_A 23 MEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVM 102 (350)
T ss_dssp CCCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred ccceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEE
Confidence 468999999999999999999975 69999999998877777778899999999987
Q ss_pred -----CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCC
Q 042825 473 -----GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENG 523 (631)
Q Consensus 473 -----gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~ 523 (631)
|+|.+++.. +....+++.+...|+.+++.| +.+||+|||+|+.+. .
T Consensus 103 Ey~~gg~L~~~i~~---~~~~~~~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~--~ 177 (350)
T 4b9d_A 103 DYCEGGDLFKRINA---QKGVLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLN--S 177 (350)
T ss_dssp ECCTTCBHHHHHHH---TTTCCCCHHHHHHHHHHHHHHHHHHHHTTCEETTCCGGGEEECTTCCEEECSTTEESCCC--H
T ss_pred eCCCCCcHHHHHHH---cCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECCCCCEEEcccccceeec--C
Confidence 788888853 333456777777888887776 578999999999763 1
Q ss_pred ccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHH-h-HhhhcCChhHHHH
Q 042825 524 KHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATW-F-QKMHKNHDTFQMA 601 (631)
Q Consensus 524 ~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~-~-~~~~~~~~~l~~~ 601 (631)
........+||+.|||||++.+..|+.++||||+||+||||+||+.||.+....+. ...+... . ......+++++++
T Consensus 178 ~~~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~-~~~i~~~~~~~~~~~~s~~~~~l 256 (350)
T 4b9d_A 178 TVELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNL-VLKIISGSFPPVSLHYSYDLRSL 256 (350)
T ss_dssp HHHHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-HHHHHHTCCCCCCTTSCHHHHHH
T ss_pred CcccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHH-HHHHHcCCCCCCCccCCHHHHHH
Confidence 22234557899999999999999999999999999999999999999986543211 1111111 1 1111235789999
Q ss_pred HHhhcCCChhhHHhHHHHHH
Q 042825 602 IDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 602 id~~L~~d~~~r~~~~~vl~ 621 (631)
|.++|..||.+|+++.++++
T Consensus 257 i~~~L~~dP~~R~s~~e~l~ 276 (350)
T 4b9d_A 257 VSQLFKRNPRDRPSVNSILE 276 (350)
T ss_dssp HHHHTCSSGGGSCCHHHHHT
T ss_pred HHHHccCChhHCcCHHHHhc
Confidence 99999999999999999876
|
| >4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=9.5e-31 Score=273.72 Aligned_cols=219 Identities=20% Similarity=0.255 Sum_probs=168.7
Q ss_pred CHHHHHhhcCCcccceeecCCCceEEEEEEecC------CcEEEEEEEecCCCCHHHHHHHHHHHHHHhc----------
Q 042825 409 PIQVLRNATNNFSEENRLGRGGVGTVYKGELKD------GTEVGVKRMELGSVTEQGIAQFESEITVLTK---------- 472 (631)
Q Consensus 409 ~~~~l~~~t~~f~~~~~iG~G~fg~Vyk~~~~~------g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~---------- 472 (631)
..++++-..++|+..+.||+|+||+||+|++.. ++.||||++.... .....++|.+|+++|.+
T Consensus 55 ~~~~wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~-~~~~~~~~~~E~~il~~l~hhpnIV~l 133 (353)
T 4ase_A 55 DASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA-THSEHRALMSELKILIHIGHHLNVVNL 133 (353)
T ss_dssp CHHHHBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTC-CHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred CCcccEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEcccc-ChHHHHHHHHHHHHHHHcCCCCcEEEE
Confidence 344555567889999999999999999998642 4689999997654 34556789999999865
Q ss_pred --------------------CChhHHhHhhhhc-----------CCCCCCHHHHHHHHHHhhcC----------------
Q 042825 473 --------------------GTLGRHLFNWEEE-----------GLEPLEWNTRLNIALDVARG---------------- 505 (631)
Q Consensus 473 --------------------gsL~~~L~~~~~~-----------~~~~L~~~~~~~I~~~ia~g---------------- 505 (631)
|+|.++|+..... ....++|.+++.|+.++|+|
T Consensus 134 ~g~~~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~~iiHRDLK~ 213 (353)
T 4ase_A 134 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAA 213 (353)
T ss_dssp EEEECCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSG
T ss_pred EEEEEecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhCCeecCccCc
Confidence 7888888653221 13468999999999999988
Q ss_pred --------CCcEEEeeccccccCCCCccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCC
Q 042825 506 --------DDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT-GRKVVDATHS 576 (631)
Q Consensus 506 --------~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~Ellt-G~~P~~~~~~ 576 (631)
+.+||+|||+|+.+..+.........+||+.|||||++.+..|+.++|||||||+||||+| |+.||.+...
T Consensus 214 ~NILl~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~ 293 (353)
T 4ase_A 214 RNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI 293 (353)
T ss_dssp GGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCC
T ss_pred cceeeCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCCH
Confidence 5689999999998754443334456789999999999999999999999999999999998 9999987655
Q ss_pred ChHHHHHHHHHhHhhh--cCChhHHHHHHhhcCCChhhHHhHHHHHHHHHhhhc
Q 042825 577 DPEYIIHLATWFQKMH--KNHDTFQMAIDKTIQLDEENLANVSTVAELGDHCCA 628 (631)
Q Consensus 577 ~~~~~~~l~~~~~~~~--~~~~~l~~~id~~L~~d~~~r~~~~~vl~lal~C~~ 628 (631)
.+.....+..-.+... ..++++.+++.+|+..||.+||++.++++..-.+++
T Consensus 294 ~~~~~~~i~~g~~~~~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~llq 347 (353)
T 4ase_A 294 DEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 347 (353)
T ss_dssp SHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCCCCCccCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHH
Confidence 5433333332211111 224689999999999999999999999886544443
|
| >3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.1e-29 Score=258.36 Aligned_cols=191 Identities=21% Similarity=0.322 Sum_probs=147.6
Q ss_pred ccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc---------------------------
Q 042825 421 SEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK--------------------------- 472 (631)
Q Consensus 421 ~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~--------------------------- 472 (631)
...+.||+|+||+||+|+.. ++..||||++..........++|.+|+++|++
T Consensus 29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvm 108 (290)
T 3fpq_A 29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT 108 (290)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEE
Confidence 45678999999999999976 58999999998776667777889999999986
Q ss_pred -----CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC---------------------------CCcEEEeeccccccC
Q 042825 473 -----GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG---------------------------DDMRVADFGLVRLVP 520 (631)
Q Consensus 473 -----gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g---------------------------~~~kl~DFGla~~~~ 520 (631)
|+|.+++.. ...+++.....++.+++.| +.+||+|||+|+...
T Consensus 109 Ey~~gg~L~~~l~~-----~~~l~~~~~~~~~~qi~~aL~ylH~~~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~ 183 (290)
T 3fpq_A 109 ELMTSGTLKTYLKR-----FKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKR 183 (290)
T ss_dssp ECCCSCBHHHHHHH-----HSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCC
T ss_pred eCCCCCCHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEecccChhheeEECCCCCEEEEeCcCCEeCC
Confidence 677777743 2457888888888777766 457999999998653
Q ss_pred CCCccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHhH---hhhcCChh
Q 042825 521 ENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQ---KMHKNHDT 597 (631)
Q Consensus 521 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~~---~~~~~~~~ 597 (631)
. ......+||+.|||||++.+ +|+.++|||||||++|||+||+.||.+..........+..... .....+++
T Consensus 184 ~----~~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 258 (290)
T 3fpq_A 184 A----SFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPE 258 (290)
T ss_dssp T----TSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCCGGGGGCCCHH
T ss_pred C----CccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCcHHHHHHHHHcCCCCCCCCccCCHH
Confidence 2 22356789999999998864 6999999999999999999999999764332211111211111 11122467
Q ss_pred HHHHHHhhcCCChhhHHhHHHHHH
Q 042825 598 FQMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 598 l~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
++++|.+||..||.+|+++.++++
T Consensus 259 ~~~li~~~L~~dP~~R~s~~e~l~ 282 (290)
T 3fpq_A 259 VKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp HHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HHHHHHHHccCChhHCcCHHHHhc
Confidence 999999999999999999998875
|
| >4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ... | Back alignment and structure |
|---|
Probab=99.96 E-value=7.2e-31 Score=268.47 Aligned_cols=197 Identities=17% Similarity=0.288 Sum_probs=151.6
Q ss_pred CCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCC-CHHHHHHHHHHHHHHhc-----------------------
Q 042825 418 NNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSV-TEQGIAQFESEITVLTK----------------------- 472 (631)
Q Consensus 418 ~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~-~~~~~~~~~~Ei~~l~~----------------------- 472 (631)
++|+..+.||+|+||+||+|+.. +|+.||||++.+... .....+.+.+|+++|++
T Consensus 32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivm 111 (311)
T 4aw0_A 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL 111 (311)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 57999999999999999999965 699999999975422 11235679999999987
Q ss_pred -----CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCC
Q 042825 473 -----GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENG 523 (631)
Q Consensus 473 -----gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~ 523 (631)
|+|.+++.. ...++......++.+++.| +.+||+|||+|+.+....
T Consensus 112 Ey~~gG~L~~~i~~-----~~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~ 186 (311)
T 4aw0_A 112 SYAKNGELLKYIRK-----IGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 186 (311)
T ss_dssp CCCTTEEHHHHHHH-----HSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECCTTT
T ss_pred ecCCCCCHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEEcCCCCEEEEEcCCceecCCCC
Confidence 688887753 1357777777777777765 578999999999875433
Q ss_pred ccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHH-hHhhhcCChhHHHHH
Q 042825 524 KHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATW-FQKMHKNHDTFQMAI 602 (631)
Q Consensus 524 ~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~-~~~~~~~~~~l~~~i 602 (631)
........+||+.|||||++.+..|+.++||||+||++|||+||+.||.+....+ ....+... .......+++++++|
T Consensus 187 ~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~-~~~~i~~~~~~~p~~~s~~~~dli 265 (311)
T 4aw0_A 187 KQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGL-IFAKIIKLEYDFPEKFFPKARDLV 265 (311)
T ss_dssp TCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHTCCCCCTTCCHHHHHHH
T ss_pred CcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHcCCCCCCcccCHHHHHHH
Confidence 3344567899999999999999999999999999999999999999998653321 11112211 111122357899999
Q ss_pred HhhcCCChhhHHhHHHHH
Q 042825 603 DKTIQLDEENLANVSTVA 620 (631)
Q Consensus 603 d~~L~~d~~~r~~~~~vl 620 (631)
.++|..||.+|+++.+++
T Consensus 266 ~~lL~~dp~~R~t~~e~~ 283 (311)
T 4aw0_A 266 EKLLVLDATKRLGCEEME 283 (311)
T ss_dssp HHHSCSSGGGSTTSGGGT
T ss_pred HHHccCCHhHCcChHHHc
Confidence 999999999999988754
|
| >4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=3.4e-30 Score=267.41 Aligned_cols=193 Identities=18% Similarity=0.318 Sum_probs=151.1
Q ss_pred CCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc------------------------
Q 042825 418 NNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK------------------------ 472 (631)
Q Consensus 418 ~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~------------------------ 472 (631)
+.|+..+.||+|+||+||+|+.+ +|+.||||++...... ..+.+.+|+++|++
T Consensus 74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~--~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmE 151 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQ--RRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVME 151 (346)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCS--SGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEC
T ss_pred HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchh--HHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEe
Confidence 46888999999999999999976 6999999999765332 33568899999976
Q ss_pred ----CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCCc
Q 042825 473 ----GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENGK 524 (631)
Q Consensus 473 ----gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~~ 524 (631)
|+|.+++.. ..+++.+...++.+++.| +.+||+|||+|+.+...
T Consensus 152 y~~gg~L~~~l~~------~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~-- 223 (346)
T 4fih_A 152 FLEGGALTDIVTH------TRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKE-- 223 (346)
T ss_dssp CCTTEEHHHHHHH------SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSS--
T ss_pred CCCCCcHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEECCCCCEEEecCcCceecCCC--
Confidence 677776642 358888888888888876 67899999999987422
Q ss_pred cccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHh----HhhhcCChhHHH
Q 042825 525 HSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWF----QKMHKNHDTFQM 600 (631)
Q Consensus 525 ~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~----~~~~~~~~~l~~ 600 (631)
.......+||+.|||||++.+..|+.++||||+||++|||++|+.||.+....+ ....+.... ......++++++
T Consensus 224 ~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~-~~~~i~~~~~~~~~~~~~~s~~~~d 302 (346)
T 4fih_A 224 VPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLK-AMKMIRDNLPPRLKNLHKVSPSLKG 302 (346)
T ss_dssp SCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH-HHHHHHHSSCCCCSCGGGSCHHHHH
T ss_pred CCcccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHH-HHHHHHcCCCCCCCccccCCHHHHH
Confidence 223456899999999999999999999999999999999999999998653221 111222211 111223578999
Q ss_pred HHHhhcCCChhhHHhHHHHHH
Q 042825 601 AIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 601 ~id~~L~~d~~~r~~~~~vl~ 621 (631)
+|.++|..||.+|+++.++++
T Consensus 303 li~~~L~~dP~~R~ta~e~l~ 323 (346)
T 4fih_A 303 FLDRLLVRDPAQRATAAELLK 323 (346)
T ss_dssp HHHHHSCSSTTTSCCHHHHTT
T ss_pred HHHHHcCCChhHCcCHHHHhc
Confidence 999999999999999998876
|
| >3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A | Back alignment and structure |
|---|
Probab=99.96 E-value=1.2e-29 Score=255.63 Aligned_cols=197 Identities=19% Similarity=0.249 Sum_probs=137.1
Q ss_pred CCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCH-HHHHHHHHHHHHHhc-----------------------
Q 042825 418 NNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTE-QGIAQFESEITVLTK----------------------- 472 (631)
Q Consensus 418 ~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~-~~~~~~~~Ei~~l~~----------------------- 472 (631)
++|+..+.||+|+||+||+|+.. +|+.||||++....... ...+++.+|++++++
T Consensus 13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivm 92 (275)
T 3hyh_A 13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI 92 (275)
T ss_dssp -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEE
Confidence 68999999999999999999965 69999999997654332 335679999999976
Q ss_pred ----CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCCc
Q 042825 473 ----GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENGK 524 (631)
Q Consensus 473 ----gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~~ 524 (631)
|+|.+++.. ...++......++.+++.| +.+||+|||+|+.....
T Consensus 93 Ey~~g~L~~~l~~-----~~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~-- 165 (275)
T 3hyh_A 93 EYAGNELFDYIVQ-----RDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG-- 165 (275)
T ss_dssp ECCCEEHHHHHHH-----SCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEECTTCCEEECCSSCC--------
T ss_pred eCCCCCHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCChHHeEECCCCCEEEeecCCCeecCCC--
Confidence 666666642 2458888888888888876 56899999999876422
Q ss_pred cccccccccCcccccccccccCCC-CchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHhHh-hhcCChhHHHHH
Q 042825 525 HSILTKVAGTFGYLAPEYIVTGRI-TAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQK-MHKNHDTFQMAI 602 (631)
Q Consensus 525 ~~~~~~~~gt~~Y~aPE~~~~~~~-~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~~~-~~~~~~~l~~~i 602 (631)
......+||+.|||||++.+..| +.++||||+||++|||+||+.||.+..... ....+...... ....+++++++|
T Consensus 166 -~~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~~~-~~~~i~~~~~~~p~~~s~~~~~li 243 (275)
T 3hyh_A 166 -NFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPV-LFKNISNGVYTLPKFLSPGAAGLI 243 (275)
T ss_dssp ----------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHTCCCCCTTSCHHHHHHH
T ss_pred -CccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCHHH-HHHHHHcCCCCCCCCCCHHHHHHH
Confidence 23345789999999999988876 579999999999999999999998643221 11122221111 112357899999
Q ss_pred HhhcCCChhhHHhHHHHHHHH
Q 042825 603 DKTIQLDEENLANVSTVAELG 623 (631)
Q Consensus 603 d~~L~~d~~~r~~~~~vl~la 623 (631)
.++|..||++|+++.++++--
T Consensus 244 ~~~L~~dP~~R~s~~eil~hp 264 (275)
T 3hyh_A 244 KRMLIVNPLNRISIHEIMQDD 264 (275)
T ss_dssp HHHSCSSGGGSCCHHHHHHCH
T ss_pred HHHccCChhHCcCHHHHHcCc
Confidence 999999999999999988743
|
| >3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=2.3e-30 Score=264.60 Aligned_cols=191 Identities=17% Similarity=0.219 Sum_probs=138.8
Q ss_pred CCcccceeecCCCceEEEEEEec----CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc---------------------
Q 042825 418 NNFSEENRLGRGGVGTVYKGELK----DGTEVGVKRMELGSVTEQGIAQFESEITVLTK--------------------- 472 (631)
Q Consensus 418 ~~f~~~~~iG~G~fg~Vyk~~~~----~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~--------------------- 472 (631)
++|+..+.||+|+||+||+|+.. .++.||||+++..........++.+|+++|.+
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~i 103 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYL 103 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEE
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence 47999999999999999999853 47899999997654333334568889988876
Q ss_pred -------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCC
Q 042825 473 -------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPE 521 (631)
Q Consensus 473 -------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~ 521 (631)
|+|.+++.. ...++......++.+++.| +.+||+|||+|+....
T Consensus 104 vmEy~~gg~L~~~l~~-----~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~ 178 (304)
T 3ubd_A 104 ILDFLRGGDLFTRLSK-----EVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESID 178 (304)
T ss_dssp EECCCTTCEEHHHHHH-----HCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECTTSCEEEESSEEEEC---
T ss_pred EEEcCCCCCHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHeEEcCCCCEEecccccceeccC
Confidence 788888753 1357888888888887776 5789999999987532
Q ss_pred CCccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHH-HhHhhhcCChhHHH
Q 042825 522 NGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLAT-WFQKMHKNHDTFQM 600 (631)
Q Consensus 522 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~-~~~~~~~~~~~l~~ 600 (631)
. .......+||+.|||||++.+..|+.++||||+||++|||+||+.||.+....+. ...+.. ........++++++
T Consensus 179 ~--~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~-~~~i~~~~~~~p~~~s~~~~~ 255 (304)
T 3ubd_A 179 H--EKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKET-MTMILKAKLGMPQFLSPEAQS 255 (304)
T ss_dssp ----CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HHHHHHCCCCCCTTSCHHHHH
T ss_pred C--CccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCHHHH-HHHHHcCCCCCCCcCCHHHHH
Confidence 2 2234567899999999999999999999999999999999999999986543221 111111 11111223578999
Q ss_pred HHHhhcCCChhhHHhH
Q 042825 601 AIDKTIQLDEENLANV 616 (631)
Q Consensus 601 ~id~~L~~d~~~r~~~ 616 (631)
+|.++|..||.+|+++
T Consensus 256 li~~~L~~dP~~R~ta 271 (304)
T 3ubd_A 256 LLRMLFKRNPANRLGA 271 (304)
T ss_dssp HHHHHTCSSGGGSTTC
T ss_pred HHHHHcccCHHHCCCC
Confidence 9999999999999973
|
| >4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=2.5e-29 Score=267.34 Aligned_cols=194 Identities=18% Similarity=0.316 Sum_probs=151.4
Q ss_pred cCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc-----------------------
Q 042825 417 TNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK----------------------- 472 (631)
Q Consensus 417 t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~----------------------- 472 (631)
.+.|+..+.||+|+||+||+|+.+ +|+.||||++...... ..+.+.+|+++|++
T Consensus 150 ~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~--~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVm 227 (423)
T 4fie_A 150 RSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQ--RRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVM 227 (423)
T ss_dssp GGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCS--SGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hHhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchh--HHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEE
Confidence 357999999999999999999976 5999999999865432 34568899999986
Q ss_pred -----CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCC
Q 042825 473 -----GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENG 523 (631)
Q Consensus 473 -----gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~ 523 (631)
|+|.+++.. ..+.+.+...|+.+++.| +.+||+|||+|+.+...
T Consensus 228 Ey~~gG~L~~~i~~------~~l~e~~~~~~~~qil~aL~ylH~~~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~- 300 (423)
T 4fie_A 228 EFLEGGALTDIVTH------TRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKE- 300 (423)
T ss_dssp ECCTTEEHHHHHHH------SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSTTTEEECTTCCEEECCCTTCEECCSS-
T ss_pred eCCCCCcHHHHHhc------cCCCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEEcCCCCEEEecCccceECCCC-
Confidence 677766642 347888888888888876 67899999999987422
Q ss_pred ccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHh----HhhhcCChhHH
Q 042825 524 KHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWF----QKMHKNHDTFQ 599 (631)
Q Consensus 524 ~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~----~~~~~~~~~l~ 599 (631)
.......+||+.|||||++.+..|+.++||||+||++|||++|+.||.+..... ....+.... ......+++++
T Consensus 301 -~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~-~~~~i~~~~~~~~~~~~~~s~~~~ 378 (423)
T 4fie_A 301 -VPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLK-AMKMIRDNLPPRLKNLHKVSPSLK 378 (423)
T ss_dssp -CCCBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH-HHHHHHHSCCCCCSCTTSSCHHHH
T ss_pred -CccccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHH-HHHHHHcCCCCCCcccccCCHHHH
Confidence 223456899999999999999999999999999999999999999998643221 111122111 11122357899
Q ss_pred HHHHhhcCCChhhHHhHHHHHH
Q 042825 600 MAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 600 ~~id~~L~~d~~~r~~~~~vl~ 621 (631)
++|.+||..||.+|+++.++++
T Consensus 379 dli~~~L~~dP~~R~ta~ell~ 400 (423)
T 4fie_A 379 GFLDRLLVRDPAQRATAAELLK 400 (423)
T ss_dssp HHHHHHSCSSTTTSCCHHHHTT
T ss_pred HHHHHHcCCChhHCcCHHHHhc
Confidence 9999999999999999999876
|
| >4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=6.9e-29 Score=256.81 Aligned_cols=196 Identities=19% Similarity=0.238 Sum_probs=148.7
Q ss_pred cCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc-----------------------
Q 042825 417 TNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK----------------------- 472 (631)
Q Consensus 417 t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~----------------------- 472 (631)
.+.|...++||+|+||+||+|+.+ +|+.||||+++.... +.+|+.++.+
T Consensus 57 ~~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~-------~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivm 129 (336)
T 4g3f_A 57 VHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF-------RVEELVACAGLSSPRIVPLYGAVREGPWVNIFM 129 (336)
T ss_dssp TTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-------CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hhheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh-------HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence 456888899999999999999976 599999999986533 2468888765
Q ss_pred -----CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------C-CcEEEeeccccccCCC
Q 042825 473 -----GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------D-DMRVADFGLVRLVPEN 522 (631)
Q Consensus 473 -----gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~-~~kl~DFGla~~~~~~ 522 (631)
|+|.+++.. ...+++.+...++.+++.| + .+||+|||+|+.+..+
T Consensus 130 Ey~~gg~L~~~l~~-----~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~ 204 (336)
T 4g3f_A 130 ELLEGGSLGQLIKQ-----MGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPD 204 (336)
T ss_dssp CCCTTCBHHHHHHH-----HSSCCHHHHHHHHHHHHHHHHHHHTTTEECSCCCGGGEEECTTSCCEEECCCTTCEEC---
T ss_pred eccCCCcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEeCCCCEEEEeeCCCCeEccCC
Confidence 788888853 1358899998898888876 3 5899999999987533
Q ss_pred Ccc---ccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHhHh----hhcCC
Q 042825 523 GKH---SILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQK----MHKNH 595 (631)
Q Consensus 523 ~~~---~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~~~----~~~~~ 595 (631)
... ......+||+.|||||++.+..|+.++||||+||++|||+||+.||.+....+.. ..+...... ....+
T Consensus 205 ~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~-~~i~~~~~~~~~~~~~~s 283 (336)
T 4g3f_A 205 GLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLC-LKIASEPPPIREIPPSCA 283 (336)
T ss_dssp ---------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCCH-HHHHHSCCGGGGSCTTSC
T ss_pred CcccceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHH-HHHHcCCCCchhcCccCC
Confidence 221 1223468999999999999999999999999999999999999999876544322 222221111 11235
Q ss_pred hhHHHHHHhhcCCChhhHHhHHHHHHHHHh
Q 042825 596 DTFQMAIDKTIQLDEENLANVSTVAELGDH 625 (631)
Q Consensus 596 ~~l~~~id~~L~~d~~~r~~~~~vl~lal~ 625 (631)
+++.++|.++|..||.+|+++.++++-...
T Consensus 284 ~~~~~li~~~L~~dP~~R~sa~el~~~l~~ 313 (336)
T 4g3f_A 284 PLTAQAIQEGLRKEPVHRASAMELRRKVGK 313 (336)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred HHHHHHHHHHccCCHhHCcCHHHHHHHHHH
Confidence 689999999999999999999998775443
|
| >4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.95 E-value=1.6e-27 Score=253.51 Aligned_cols=199 Identities=15% Similarity=0.273 Sum_probs=149.4
Q ss_pred cCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc-----------------------
Q 042825 417 TNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK----------------------- 472 (631)
Q Consensus 417 t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~----------------------- 472 (631)
.++|+..+.||+|+||+||+|+.. +|+.||||+++.........+++.+|+++|++
T Consensus 53 ~~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~ 132 (398)
T 4b99_A 53 GDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFK 132 (398)
T ss_dssp CSSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCC
T ss_pred CCCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCC
Confidence 357999999999999999999975 69999999998766566667889999999976
Q ss_pred ----------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccc
Q 042825 473 ----------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRL 518 (631)
Q Consensus 473 ----------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~ 518 (631)
|+|.+++. ....+++.+...++.+++.| +.+||+|||+|+.
T Consensus 133 ~~~ivmE~~~g~L~~~i~-----~~~~l~~~~~~~~~~qil~al~ylH~~~iiHRDlKP~NIl~~~~~~~Ki~DFGla~~ 207 (398)
T 4b99_A 133 SVYVVLDLMESDLHQIIH-----SSQPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARG 207 (398)
T ss_dssp CEEEEEECCSEEHHHHHT-----SSSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTCCEEECCCTTCBC
T ss_pred EEEEEEeCCCCCHHHHHH-----hcCCCCHHHHHHHHHHHHHHHHHHHHCcCcCCCcCccccccCCCCCEEEeecceeee
Confidence 22333331 23568888888888888877 5689999999987
Q ss_pred cCCCC--ccccccccccCcccccccccccC-CCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHh-------
Q 042825 519 VPENG--KHSILTKVAGTFGYLAPEYIVTG-RITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWF------- 588 (631)
Q Consensus 519 ~~~~~--~~~~~~~~~gt~~Y~aPE~~~~~-~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~------- 588 (631)
+.... ........+||+.|||||++.+. .|+.++||||+||++|||++|+.||.+....+ ....+....
T Consensus 208 ~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~-~l~~I~~~~g~p~~~~ 286 (398)
T 4b99_A 208 LCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVH-QLQLIMMVLGTPSPAV 286 (398)
T ss_dssp C-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHH-HHHHHHHHHCCCCGGG
T ss_pred cccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHH-HHHHHHHhcCCCChHH
Confidence 64221 11234567999999999998875 46999999999999999999999998654321 111111110
Q ss_pred -------------------------HhhhcCChhHHHHHHhhcCCChhhHHhHHHHHH
Q 042825 589 -------------------------QKMHKNHDTFQMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 589 -------------------------~~~~~~~~~l~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
......++++.++|.+||..||.+|+++.++++
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~ 344 (398)
T 4b99_A 287 IQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALR 344 (398)
T ss_dssp TC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred hhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence 001123567899999999999999999998775
|
| >4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=5.9e-28 Score=247.34 Aligned_cols=195 Identities=25% Similarity=0.371 Sum_probs=132.6
Q ss_pred CCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc------------------------
Q 042825 418 NNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK------------------------ 472 (631)
Q Consensus 418 ~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~------------------------ 472 (631)
++|+..+.||+|+||+||+|+.+ +|+.||||+++... .....+++.+|+++|++
T Consensus 5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~-~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~ 83 (299)
T 4g31_A 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPN-RELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQP 83 (299)
T ss_dssp HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECS-SHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC-------
T ss_pred hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccC-CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCccccccc
Confidence 46899999999999999999975 69999999997654 34456789999999876
Q ss_pred ----------------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEe
Q 042825 473 ----------------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVAD 512 (631)
Q Consensus 473 ----------------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~D 512 (631)
|+|.+++... ......++.....|+.+++.| +.+||+|
T Consensus 84 ~~~~~~l~ivmE~~~gg~L~~~l~~~--~~~~~~~~~~~~~i~~qi~~al~ylH~~~IiHRDlKp~NILl~~~~~vKl~D 161 (299)
T 4g31_A 84 SSPKVYLYIQMQLCRKENLKDWMNGR--CTIEERERSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGD 161 (299)
T ss_dssp ---CEEEEEEEECCCSCCHHHHHHTC--CSGGGSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECC
T ss_pred cCCCcEEEEEEecCCCCcHHHHHHhc--CCCChhHHHHHHHHHHHHHHHHHHHHHCcCccccCcHHHeEECCCCcEEEcc
Confidence 4555555321 112335566667777777766 5789999
Q ss_pred eccccccCCCCcc----------ccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHH
Q 042825 513 FGLVRLVPENGKH----------SILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYII 582 (631)
Q Consensus 513 FGla~~~~~~~~~----------~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~ 582 (631)
||+|+.+...... ...+..+||+.|||||++.+..|+.++||||+||++|||++ ||.... ....
T Consensus 162 FGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~---~~~~ 235 (299)
T 4g31_A 162 FGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQM---ERVR 235 (299)
T ss_dssp CCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHH---HHHH
T ss_pred CccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCcc---HHHH
Confidence 9999987432211 12244689999999999999999999999999999999996 776321 1111
Q ss_pred HHHHHh-----HhhhcCChhHHHHHHhhcCCChhhHHhHHHHHH
Q 042825 583 HLATWF-----QKMHKNHDTFQMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 583 ~l~~~~-----~~~~~~~~~l~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
.+.... .......+...++|.+||..||.+|+++.++++
T Consensus 236 ~~~~~~~~~~p~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 279 (299)
T 4g31_A 236 TLTDVRNLKFPPLFTQKYPCEYVMVQDMLSPSPMERPEAINIIE 279 (299)
T ss_dssp HHHHHHTTCCCHHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HHHHHhcCCCCCCCcccCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 111111 111112345688999999999999999998876
|
| >1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8 | Back alignment and structure |
|---|
Probab=99.95 E-value=1.4e-27 Score=247.04 Aligned_cols=199 Identities=28% Similarity=0.520 Sum_probs=175.8
Q ss_pred CCChhhHHHHHHHHHhCCCCCCC-CCC-CCCCCC--ccceeeCCC---CCeEEEEeCCCCCcc--cCcchhcCCccCcee
Q 042825 56 NQSRPDAAVMQDLKASFVIPKRL-KWS-DPDPCQ--WSHVICSDD---GQVTNIELQDQNRKG--TVPPILKKLSSMAVM 126 (631)
Q Consensus 56 ~~~~~~~~~l~~~k~~~~~~~~~-~w~-~~~~C~--w~gv~C~~~---~~l~~l~l~~n~l~g--~ip~~~~~l~~L~~L 126 (631)
.|.+.|..+|++||.++.+|..+ +|. +.+||. |.||+|+.. ++|+.|+|++|+++| .+|+.++++++|++|
T Consensus 2 ~c~~~~~~aL~~~k~~~~~~~~l~~W~~~~~~C~~~w~gv~C~~~~~~~~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L 81 (313)
T 1ogq_A 2 LCNPQDKQALLQIKKDLGNPTTLSSWLPTTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSLANLPYLNFL 81 (313)
T ss_dssp CSCHHHHHHHHHHHHHTTCCGGGTTCCTTSCTTTTCSTTEEECCSSSCCCEEEEEEECCCCSSCEECCGGGGGCTTCSEE
T ss_pred CCCHHHHHHHHHHHHhcCCcccccCCCCCCCCCcCCCcceEeCCCCCCceEEEEECCCCCccCCcccChhHhCCCCCCee
Confidence 47889999999999999876533 794 568998 999999754 799999999999999 999999999999999
Q ss_pred eccc-CcccCCCCcCcc---cccccccccccceecCCCCCCcCCCCCCcEEEccCCcccccCCCCCCCCccCcCCCCCCC
Q 042825 127 YLEN-NQLRGPIPSLVG---SLEFFSAYEANISGTIPDFIGTDTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLE 202 (631)
Q Consensus 127 ~L~~-N~l~g~lP~~~~---~L~~L~l~~n~l~g~ip~~~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~~~~~~~~l~~L~ 202 (631)
+|++ |.+.+.+|..++ +|++|++++|++++.+|..+. .+++|++|+|++|+++|.+|..+ +++++|+
T Consensus 82 ~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~--~l~~L~~L~Ls~N~l~~~~p~~~-------~~l~~L~ 152 (313)
T 1ogq_A 82 YIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLS--QIKTLVTLDFSYNALSGTLPPSI-------SSLPNLV 152 (313)
T ss_dssp EEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGG--GCTTCCEEECCSSEEESCCCGGG-------GGCTTCC
T ss_pred eCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHh--CCCCCCEEeCCCCccCCcCChHH-------hcCCCCC
Confidence 9995 999999998776 899999999999999999998 89999999999999999998765 5899999
Q ss_pred EEEeecCcCcccCChhhccCCC-CCCEEEccCCCCcccCCCCCCCCceEEeecCCCcccCCCC
Q 042825 203 DLSLGHNKLTGIFPVSSFNNHP-KLTTLNLTNNLLQGPTPRFNNSKLTVDMRTGSNCFCLDDP 264 (631)
Q Consensus 203 ~L~L~~N~l~g~iP~~~~~~l~-~L~~L~ls~N~l~g~~p~~~~~~~~~~l~~~~n~~~~~~~ 264 (631)
+|+|++|+++|.+|.. ++.++ +|+.|++++|.++|.+|..........+++++|.+.+..|
T Consensus 153 ~L~L~~N~l~~~~p~~-l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~L~~L~Ls~N~l~~~~~ 214 (313)
T 1ogq_A 153 GITFDGNRISGAIPDS-YGSFSKLFTSMTISRNRLTGKIPPTFANLNLAFVDLSRNMLEGDAS 214 (313)
T ss_dssp EEECCSSCCEEECCGG-GGCCCTTCCEEECCSSEEEEECCGGGGGCCCSEEECCSSEEEECCG
T ss_pred eEECcCCcccCcCCHH-HhhhhhcCcEEECcCCeeeccCChHHhCCcccEEECcCCcccCcCC
Confidence 9999999999999976 88887 9999999999999998875544335567789999887554
|
| >3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=2e-27 Score=244.34 Aligned_cols=197 Identities=17% Similarity=0.223 Sum_probs=134.4
Q ss_pred CcccceeecCCCceEEEEEEecCCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc--------------------------
Q 042825 419 NFSEENRLGRGGVGTVYKGELKDGTEVGVKRMELGSVTEQGIAQFESEITVLTK-------------------------- 472 (631)
Q Consensus 419 ~f~~~~~iG~G~fg~Vyk~~~~~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~-------------------------- 472 (631)
+|...+.||+|+||+||+|++ +|+.||||++.... .....+++|+..+.+
T Consensus 4 ~i~L~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~~---~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV 79 (303)
T 3hmm_A 4 TIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSRE---ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLV 79 (303)
T ss_dssp GEEEEEEEEECSSSEEEEEEE-TTEEEEEEEECGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEE
T ss_pred EEEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECccc---hhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEE
Confidence 467789999999999999998 58999999996532 222233445554432
Q ss_pred ------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC--------------------------------CCcEEEeec
Q 042825 473 ------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG--------------------------------DDMRVADFG 514 (631)
Q Consensus 473 ------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g--------------------------------~~~kl~DFG 514 (631)
|+|.++++. ..++|..+.+|+.++|+| +.+||+|||
T Consensus 80 ~Ey~~~gsL~~~l~~------~~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFG 153 (303)
T 3hmm_A 80 SDYHEHGSLFDYLNR------YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLG 153 (303)
T ss_dssp EECCTTCBHHHHHHH------CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCT
T ss_pred ecCCCCCcHHHHHHh------CCCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCC
Confidence 777777753 358999999999888765 457999999
Q ss_pred cccccCCCCcc--ccccccccCcccccccccccC------CCCchhhHHHHHHHHHHHHcCCCCCCCCCCC---------
Q 042825 515 LVRLVPENGKH--SILTKVAGTFGYLAPEYIVTG------RITAKVDVYSFGMILMDLITGRKVVDATHSD--------- 577 (631)
Q Consensus 515 la~~~~~~~~~--~~~~~~~gt~~Y~aPE~~~~~------~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~--------- 577 (631)
+|+........ ......+||++|||||++.+. .|+.|+|||||||+||||+||+.||......
T Consensus 154 la~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~ 233 (303)
T 3hmm_A 154 LAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVP 233 (303)
T ss_dssp TCEEEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSC
T ss_pred CCccccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhccc
Confidence 99877533221 122346899999999998754 4788999999999999999998776432110
Q ss_pred -hHHHHHHHHHh-Hhh----h----cC---ChhHHHHHHhhcCCChhhHHhHHHHHHHHHh
Q 042825 578 -PEYIIHLATWF-QKM----H----KN---HDTFQMAIDKTIQLDEENLANVSTVAELGDH 625 (631)
Q Consensus 578 -~~~~~~l~~~~-~~~----~----~~---~~~l~~~id~~L~~d~~~r~~~~~vl~lal~ 625 (631)
......+...+ ... . .. .+.+.+++.+|+..||.+||++.++++.--.
T Consensus 234 ~~~~~~~~~~~~~~~~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~ 294 (303)
T 3hmm_A 234 SDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQ 294 (303)
T ss_dssp SSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHH
T ss_pred ccchHHHHHHHHhcccCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHH
Confidence 00011111111 000 0 00 1257789999999999999999998875443
|
| >4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=1.8e-26 Score=242.67 Aligned_cols=197 Identities=20% Similarity=0.310 Sum_probs=141.0
Q ss_pred HHhhcCCcccceeecCCCceEEEEEEec----CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc----------------
Q 042825 413 LRNATNNFSEENRLGRGGVGTVYKGELK----DGTEVGVKRMELGSVTEQGIAQFESEITVLTK---------------- 472 (631)
Q Consensus 413 l~~~t~~f~~~~~iG~G~fg~Vyk~~~~----~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~---------------- 472 (631)
+.+..+.|+..+.||+|+||+||+|+.+ .++.||||++.... ...++.+|+++|..
T Consensus 16 ~p~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~----~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~ 91 (361)
T 4f9c_A 16 VPQLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS----HPIRIAAELQCLTVAGGQDNVMGVKYCFRK 91 (361)
T ss_dssp SGGGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS----CHHHHHHHHHHHHHTCSBTTBCCCSEEEEE
T ss_pred cCCccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc----CHHHHHHHHHHHHHhcCCCCCceEEEEEEE
Confidence 3456688999999999999999999853 46789999997543 23567889988864
Q ss_pred -------------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC-------------------------CCcEEEeec
Q 042825 473 -------------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG-------------------------DDMRVADFG 514 (631)
Q Consensus 473 -------------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g-------------------------~~~kl~DFG 514 (631)
|+|.+++ ..+++.+...++.+++.| +.+||+|||
T Consensus 92 ~~~~~lvmE~~~g~~L~~~~--------~~l~~~~~~~~~~qll~al~ylH~~gIiHRDiKPeNiLl~~~~~~~kl~DFG 163 (361)
T 4f9c_A 92 NDHVVIAMPYLEHESFLDIL--------NSLSFQEVREYMLNLFKALKRIHQFGIVHRDVKPSNFLYNRRLKKYALVDFG 163 (361)
T ss_dssp TTEEEEEEECCCCCCHHHHH--------TTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTEEEECCCT
T ss_pred CCEEEEEEeCCCcccHHHHH--------cCCCHHHHHHHHHHHHHHHHHHHHCCeEeCcCCHHHeEEeCCCCeEEECcCC
Confidence 4554444 247777777777777766 457899999
Q ss_pred cccccCCCCc--------------------------cccccccccCcccccccccccC-CCCchhhHHHHHHHHHHHHcC
Q 042825 515 LVRLVPENGK--------------------------HSILTKVAGTFGYLAPEYIVTG-RITAKVDVYSFGMILMDLITG 567 (631)
Q Consensus 515 la~~~~~~~~--------------------------~~~~~~~~gt~~Y~aPE~~~~~-~~~~k~DVwS~GvvL~ElltG 567 (631)
+|+....... ....+..+||+.|||||++.+. .|+.++||||+||++|||+||
T Consensus 164 la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G 243 (361)
T 4f9c_A 164 LAQGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSG 243 (361)
T ss_dssp TCEECTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHT
T ss_pred CCcccCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHC
Confidence 9986532211 0122346899999999999876 489999999999999999999
Q ss_pred CCCCCCCCCChHHHHHHHHH---------h----------------------------------------------Hhhh
Q 042825 568 RKVVDATHSDPEYIIHLATW---------F----------------------------------------------QKMH 592 (631)
Q Consensus 568 ~~P~~~~~~~~~~~~~l~~~---------~----------------------------------------------~~~~ 592 (631)
+.||.....+......+... . ....
T Consensus 244 ~~Pf~~~~~~~~~l~~I~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 323 (361)
T 4f9c_A 244 RYPFYKASDDLTALAQIMTIRGSRETIQAAKTFGKSILCSKEVPAQDLRKLCERLRGMDSSTPKLTSDIQGHATNLEGWN 323 (361)
T ss_dssp CSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTEEEEESSCCCCCCHHHHHHHHC----------------------CT
T ss_pred CCCCCCCCCHHHHHHHHHHhcCCccchhhhhhccccccccccCcchhhhHHHHhhccccccccccccccccccccccccc
Confidence 99997544322111111110 0 0001
Q ss_pred cCChhHHHHHHhhcCCChhhHHhHHHHHH
Q 042825 593 KNHDTFQMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 593 ~~~~~l~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
..++++.|+++++|..||.+|+++.++++
T Consensus 324 ~is~~a~DLl~~lL~~dP~~R~ta~eaL~ 352 (361)
T 4f9c_A 324 EVPDEAYDLLDKLLDLNPASRITAEEALL 352 (361)
T ss_dssp TCCHHHHHHHHHHTCSCTTTSCCHHHHHT
T ss_pred cCCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence 23467899999999999999999998775
|
| >3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A | Back alignment and structure |
|---|
Probab=99.92 E-value=1.1e-25 Score=250.94 Aligned_cols=195 Identities=17% Similarity=0.263 Sum_probs=150.7
Q ss_pred cCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc-----------------------
Q 042825 417 TNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK----------------------- 472 (631)
Q Consensus 417 t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~----------------------- 472 (631)
.++|+..+.||+|+||+||+|+.+ +|+.||||++.... ....+.+.+|+++|..
T Consensus 156 l~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~--~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~ 233 (573)
T 3uto_A 156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPH--ESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIY 233 (573)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS--HHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEE
T ss_pred ccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccc--hhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEE
Confidence 468999999999999999999976 59999999997653 3456778999999875
Q ss_pred -----CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC--------------------------CCcEEEeeccccccCC
Q 042825 473 -----GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG--------------------------DDMRVADFGLVRLVPE 521 (631)
Q Consensus 473 -----gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g--------------------------~~~kl~DFGla~~~~~ 521 (631)
|+|.+++. .....+++.+...++.+++.| +.+||+|||+|+.+..
T Consensus 234 E~~~gg~L~~~i~----~~~~~l~e~~~~~~~~qi~~al~ylH~~~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~ 309 (573)
T 3uto_A 234 EFMSGGELFEKVA----DEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDP 309 (573)
T ss_dssp ECCCCCBHHHHHT----CTTSCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCSSCEECCT
T ss_pred eecCCCcHHHHHH----HhCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhccccCCCCCCEEEeeccceeEccC
Confidence 67766663 223457777777777777665 4689999999998753
Q ss_pred CCccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHh----Hh-hhcCCh
Q 042825 522 NGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWF----QK-MHKNHD 596 (631)
Q Consensus 522 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~----~~-~~~~~~ 596 (631)
. ......+||+.|||||++.+..|+.++||||+||++|||++|+.||.+....+ ....+.... .. ....++
T Consensus 310 ~---~~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~-~~~~i~~~~~~~~~~~~~~~s~ 385 (573)
T 3uto_A 310 K---QSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDE-TLRNVKSCDWNMDDSAFSGISE 385 (573)
T ss_dssp T---SEEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHH-HHHHHHTTCCCCCSGGGTTSCH
T ss_pred C---CceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHH-HHHHHHhCCCCCCcccccCCCH
Confidence 2 23345689999999999999999999999999999999999999998654321 111222110 01 112357
Q ss_pred hHHHHHHhhcCCChhhHHhHHHHHH
Q 042825 597 TFQMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 597 ~l~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
+++++|.++|..||.+|+++.++++
T Consensus 386 ~~~dli~~~L~~dp~~R~t~~e~l~ 410 (573)
T 3uto_A 386 DGKDFIRKLLLADPNTRMTIHQALE 410 (573)
T ss_dssp HHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred HHHHHHHHHccCChhHCcCHHHHhc
Confidence 8999999999999999999998876
|
| >3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A | Back alignment and structure |
|---|
Probab=99.91 E-value=7.5e-25 Score=243.41 Aligned_cols=190 Identities=21% Similarity=0.300 Sum_probs=137.2
Q ss_pred cCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCC----HHHHHHHHHHHHHHhc-------------------
Q 042825 417 TNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVT----EQGIAQFESEITVLTK------------------- 472 (631)
Q Consensus 417 t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~----~~~~~~~~~Ei~~l~~------------------- 472 (631)
.++|+..++||+|+||+||+|+.+ +|+.||||++.+.... .........++.++..
T Consensus 188 lddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~l 267 (689)
T 3v5w_A 188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKL 267 (689)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEE
T ss_pred hHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEE
Confidence 367999999999999999999976 5999999999753221 1112222334555542
Q ss_pred ---------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeecccccc
Q 042825 473 ---------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLV 519 (631)
Q Consensus 473 ---------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~ 519 (631)
|+|..++... ..++......++.+++.| +.+||+|||+|+.+
T Consensus 268 ylVmEy~~GGdL~~~l~~~-----~~l~E~~a~~y~~qIl~aL~yLH~~gIiHRDLKPeNILld~~G~vKL~DFGlA~~~ 342 (689)
T 3v5w_A 268 SFILDLMNGGDLHYHLSQH-----GVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDF 342 (689)
T ss_dssp EEEECCCCSCBHHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred EEEEecCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHeEEeCCCCEEecccceeeec
Confidence 7888888531 347777777777776665 67899999999977
Q ss_pred CCCCccccccccccCccccccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHH--HHHHH-hHhhhcCC
Q 042825 520 PENGKHSILTKVAGTFGYLAPEYIVT-GRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYII--HLATW-FQKMHKNH 595 (631)
Q Consensus 520 ~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~--~l~~~-~~~~~~~~ 595 (631)
... .....+||+.|||||++.. ..|+.++||||+||++|||++|+.||.+......... .+... .......+
T Consensus 343 ~~~----~~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~~i~~~i~~~~~~~p~~~S 418 (689)
T 3v5w_A 343 SKK----KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFS 418 (689)
T ss_dssp SSC----CCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHHHHHHHHHHCCCCCCTTSC
T ss_pred CCC----CCCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCccCC
Confidence 422 2345789999999999975 5799999999999999999999999976433321111 11110 11111235
Q ss_pred hhHHHHHHhhcCCChhhHHh
Q 042825 596 DTFQMAIDKTIQLDEENLAN 615 (631)
Q Consensus 596 ~~l~~~id~~L~~d~~~r~~ 615 (631)
++++++|.++|..||.+|.+
T Consensus 419 ~~a~dLI~~lL~~dP~~Rl~ 438 (689)
T 3v5w_A 419 PELRSLLEGLLQRDVNRRLG 438 (689)
T ss_dssp HHHHHHHHHHTCSCGGGCTT
T ss_pred HHHHHHHHHHccCCHhHCCC
Confidence 78999999999999999987
|
| >3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.91 E-value=7.2e-25 Score=229.60 Aligned_cols=203 Identities=18% Similarity=0.263 Sum_probs=148.4
Q ss_pred cCCcccceeecCCCceEEEEEEecCCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc------------------------
Q 042825 417 TNNFSEENRLGRGGVGTVYKGELKDGTEVGVKRMELGSVTEQGIAQFESEITVLTK------------------------ 472 (631)
Q Consensus 417 t~~f~~~~~iG~G~fg~Vyk~~~~~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~------------------------ 472 (631)
.+.|+..+.||+|+||.||++...+++.||||++..........+.+.+|++++.+
T Consensus 8 ~~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv 87 (343)
T 3dbq_A 8 GRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMV 87 (343)
T ss_dssp SCEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred cCEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEE
Confidence 45689999999999999999998889999999998776666677889999998865
Q ss_pred -----CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC-----------------------CCcEEEeeccccccCCCCc
Q 042825 473 -----GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG-----------------------DDMRVADFGLVRLVPENGK 524 (631)
Q Consensus 473 -----gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g-----------------------~~~kl~DFGla~~~~~~~~ 524 (631)
|+|.+++.. ...+++..+..++.+++.| +.+||+|||+++.......
T Consensus 88 ~e~~~~~L~~~l~~-----~~~~~~~~~~~i~~qi~~al~~lH~~~iiHrDikp~NIll~~~~~kl~DFG~a~~~~~~~~ 162 (343)
T 3dbq_A 88 MECGNIDLNSWLKK-----KKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGMLKLIDFGIANQMQPDTT 162 (343)
T ss_dssp ECCCSEEHHHHHHH-----SCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEETTEEEECCCSSSCCC-----
T ss_pred EeCCCCCHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEECCcEEEeecccccccCcccc
Confidence 344444432 2468888888888888876 4578999999987753332
Q ss_pred cccccccccCccccccccccc-----------CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHhHhh--
Q 042825 525 HSILTKVAGTFGYLAPEYIVT-----------GRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQKM-- 591 (631)
Q Consensus 525 ~~~~~~~~gt~~Y~aPE~~~~-----------~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~~~~-- 591 (631)
........||+.|+|||++.+ ..++.++|||||||++|||++|+.||...... ...+.......
T Consensus 163 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~---~~~~~~~~~~~~~ 239 (343)
T 3dbq_A 163 SVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ---ISKLHAIIDPNHE 239 (343)
T ss_dssp -------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSH---HHHHHHHHCTTSC
T ss_pred cccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhH---HHHHHHHhcCCcc
Confidence 223445689999999999864 67899999999999999999999999864332 11222221111
Q ss_pred ----hcCChhHHHHHHhhcCCChhhHHhHHHHHHHHHhhh
Q 042825 592 ----HKNHDTFQMAIDKTIQLDEENLANVSTVAELGDHCC 627 (631)
Q Consensus 592 ----~~~~~~l~~~id~~L~~d~~~r~~~~~vl~lal~C~ 627 (631)
...+.++.+++.+||..||.+|+++.++++--....
T Consensus 240 ~~~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~hp~~~~ 279 (343)
T 3dbq_A 240 IEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQI 279 (343)
T ss_dssp CCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHS
T ss_pred cCCcccCCHHHHHHHHHHcCCChhHCCCHHHHHhCccccc
Confidence 111357899999999999999999999887555443
|
| >3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=1.7e-25 Score=232.38 Aligned_cols=216 Identities=34% Similarity=0.570 Sum_probs=160.0
Q ss_pred CCCcCHHHHHhhcCCcccceeecCCCceEEEEEEecCCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc------------
Q 042825 405 DMAIPIQVLRNATNNFSEENRLGRGGVGTVYKGELKDGTEVGVKRMELGSVTEQGIAQFESEITVLTK------------ 472 (631)
Q Consensus 405 ~~~~~~~~l~~~t~~f~~~~~iG~G~fg~Vyk~~~~~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~------------ 472 (631)
...+++.++..++++|...+.||+|+||.||+|+.++|+.||||++...... ....++.+|++++.+
T Consensus 17 ~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~ 95 (326)
T 3uim_A 17 LKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQ-GGELQFQTEVEMISMAVHRNLLRLRGF 95 (326)
T ss_dssp CEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC------CCCHHHHHHHGGGTCCCTTBCCCCEE
T ss_pred cceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCc-hHHHHHHHHHHHHHhccCCCccceEEE
Confidence 3468899999999999999999999999999999888999999998754321 223368899998876
Q ss_pred ----------------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC---------------------------CCcE
Q 042825 473 ----------------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG---------------------------DDMR 509 (631)
Q Consensus 473 ----------------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g---------------------------~~~k 509 (631)
|+|.+++.... .....++|..+..|+.+++.| +.+|
T Consensus 96 ~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~k 174 (326)
T 3uim_A 96 CMTPTERLLVYPYMANGSVASCLRERP-ESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAV 174 (326)
T ss_dssp ECCSSCCEEEEECCTTCBHHHHHHCCS-TTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEE
T ss_pred EecCCceEEEEEeccCCCHHHHHHhcc-ccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEE
Confidence 57777765321 223458999999888877654 3678
Q ss_pred EEeeccccccCCCCccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHhH
Q 042825 510 VADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQ 589 (631)
Q Consensus 510 l~DFGla~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~~ 589 (631)
|+|||+++..... .........||+.|+|||++.+..++.++|||||||++|||+||+.||+...........+..|+.
T Consensus 175 l~Dfg~~~~~~~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~ 253 (326)
T 3uim_A 175 VGDFGLAKLMDYK-DTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVK 253 (326)
T ss_dssp ECCCSSCEECCSS-SSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHT
T ss_pred eccCccccccCcc-cccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHH
Confidence 9999999876422 222344567999999999998889999999999999999999999999621000000111233433
Q ss_pred hhhcC-------------------ChhHHHHHHhhcCCChhhHHhHHHHHHHH
Q 042825 590 KMHKN-------------------HDTFQMAIDKTIQLDEENLANVSTVAELG 623 (631)
Q Consensus 590 ~~~~~-------------------~~~l~~~id~~L~~d~~~r~~~~~vl~la 623 (631)
..... ..++.+++..|+..||.+||++.++++..
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L 306 (326)
T 3uim_A 254 GLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRML 306 (326)
T ss_dssp TTTSSCCSTTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHH
T ss_pred HHhhchhhhhhcChhhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHh
Confidence 22111 14688999999999999999999998754
|
| >3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A | Back alignment and structure |
|---|
Probab=99.91 E-value=6.2e-25 Score=228.59 Aligned_cols=199 Identities=17% Similarity=0.258 Sum_probs=152.4
Q ss_pred hhcCCcccceeecCCCceEEEEEEe-cCCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc---------------------
Q 042825 415 NATNNFSEENRLGRGGVGTVYKGEL-KDGTEVGVKRMELGSVTEQGIAQFESEITVLTK--------------------- 472 (631)
Q Consensus 415 ~~t~~f~~~~~iG~G~fg~Vyk~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~--------------------- 472 (631)
...++|...+.||+|+||.||+|+. .+|+.||||++..........+++.+|++++.+
T Consensus 12 ~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~l 91 (328)
T 3fe3_A 12 PHIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYL 91 (328)
T ss_dssp CEETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred CccCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEE
Confidence 3457899999999999999999997 479999999998766666677889999999876
Q ss_pred -------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCC
Q 042825 473 -------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPE 521 (631)
Q Consensus 473 -------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~ 521 (631)
|+|.+++.. ...+++.+...++.+++.| +.+||+|||+++....
T Consensus 92 v~e~~~~~~L~~~l~~-----~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~ 166 (328)
T 3fe3_A 92 IMEYASGGEVFDYLVA-----HGRMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTV 166 (328)
T ss_dssp EECCCTTCBHHHHHHH-----HCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECSTTCCGGGSS
T ss_pred EEECCCCCcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCCEeccCCCHHHEEEcCCCCEEEeeccCceecCC
Confidence 566666643 1347788888888887766 5689999999987643
Q ss_pred CCccccccccccCcccccccccccCCCC-chhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHhHhhhcCChhHHH
Q 042825 522 NGKHSILTKVAGTFGYLAPEYIVTGRIT-AKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQKMHKNHDTFQM 600 (631)
Q Consensus 522 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~~-~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~ 600 (631)
.. .....+||+.|+|||++.+..++ .++||||+||++|||++|+.||++.....................+.++.+
T Consensus 167 ~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~ 243 (328)
T 3fe3_A 167 GG---KLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCEN 243 (328)
T ss_dssp SC---GGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCTTSCHHHHH
T ss_pred CC---ccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCCCCHHHHH
Confidence 22 34567899999999999888875 799999999999999999999986542211111111101111223578999
Q ss_pred HHHhhcCCChhhHHhHHHHHH
Q 042825 601 AIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 601 ~id~~L~~d~~~r~~~~~vl~ 621 (631)
++.++|..||.+|+++.++++
T Consensus 244 li~~~L~~dP~~R~t~~eil~ 264 (328)
T 3fe3_A 244 LLKRFLVLNPIKRGTLEQIMK 264 (328)
T ss_dssp HHHHHCCSSTTTSCCHHHHTT
T ss_pred HHHHHCCCChhHCcCHHHHhc
Confidence 999999999999999998875
|
| >2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=1.1e-24 Score=232.26 Aligned_cols=200 Identities=18% Similarity=0.260 Sum_probs=147.7
Q ss_pred CCcccceeecCCCceEEEEEEecCCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc-------------------------
Q 042825 418 NNFSEENRLGRGGVGTVYKGELKDGTEVGVKRMELGSVTEQGIAQFESEITVLTK------------------------- 472 (631)
Q Consensus 418 ~~f~~~~~iG~G~fg~Vyk~~~~~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~------------------------- 472 (631)
+.|...+.||+|+||.||+|...+++.||||++..........+.+.+|++++.+
T Consensus 56 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~ 135 (390)
T 2zmd_A 56 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM 135 (390)
T ss_dssp EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred CceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEE
Confidence 4589999999999999999998889999999998766666677889999998865
Q ss_pred ----CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC-----------------------CCcEEEeeccccccCCCCcc
Q 042825 473 ----GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG-----------------------DDMRVADFGLVRLVPENGKH 525 (631)
Q Consensus 473 ----gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g-----------------------~~~kl~DFGla~~~~~~~~~ 525 (631)
++|.+++.. ...+++..+..|+.+++.| +.+||+|||+++.+......
T Consensus 136 E~~~~~L~~~l~~-----~~~~~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~~~~~kl~DFG~a~~~~~~~~~ 210 (390)
T 2zmd_A 136 ECGNIDLNSWLKK-----KKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGMLKLIDFGIANQMQPDTTS 210 (390)
T ss_dssp ECCSEEHHHHHHH-----CSSCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCCGGGEEESSSCEEECCCSSSCCC------
T ss_pred ecCCCCHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEEECCeEEEEecCccccccCCCcc
Confidence 334444432 2367888888888888776 56789999999877533222
Q ss_pred ccccccccCccccccccccc-----------CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHhHhh---
Q 042825 526 SILTKVAGTFGYLAPEYIVT-----------GRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQKM--- 591 (631)
Q Consensus 526 ~~~~~~~gt~~Y~aPE~~~~-----------~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~~~~--- 591 (631)
......+||+.|+|||++.+ ..++.++|||||||++|||++|+.||....... ..+.......
T Consensus 211 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~---~~~~~~~~~~~~~ 287 (390)
T 2zmd_A 211 VVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQI---SKLHAIIDPNHEI 287 (390)
T ss_dssp ---CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCHH---HHHHHHHCTTSCC
T ss_pred ccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHHH---HHHHHHhCccccC
Confidence 23445689999999999865 368999999999999999999999998643321 1122211111
Q ss_pred ---hcCChhHHHHHHhhcCCChhhHHhHHHHHHHHHh
Q 042825 592 ---HKNHDTFQMAIDKTIQLDEENLANVSTVAELGDH 625 (631)
Q Consensus 592 ---~~~~~~l~~~id~~L~~d~~~r~~~~~vl~lal~ 625 (631)
...+.++.+++.+||..||.+|+++.++++--+.
T Consensus 288 ~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~~ 324 (390)
T 2zmd_A 288 EFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYV 324 (390)
T ss_dssp CCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHH
T ss_pred CCCccchHHHHHHHHHHcccChhhCCCHHHHhhCcCc
Confidence 0113578999999999999999999998865443
|
| >2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=6.7e-25 Score=227.49 Aligned_cols=213 Identities=35% Similarity=0.612 Sum_probs=157.8
Q ss_pred CcCHHHHHhhcCCcccceeecCCCceEEEEEEecCCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc--------------
Q 042825 407 AIPIQVLRNATNNFSEENRLGRGGVGTVYKGELKDGTEVGVKRMELGSVTEQGIAQFESEITVLTK-------------- 472 (631)
Q Consensus 407 ~~~~~~l~~~t~~f~~~~~iG~G~fg~Vyk~~~~~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~-------------- 472 (631)
.+++.++..++++|+..+.||+|+||.||+|+.++|+.||||++..... ...+++.+|++++.+
T Consensus 28 ~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~ 105 (321)
T 2qkw_B 28 RVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESS--QGIEEFETEIETLSFCRHPHLVSLIGFCD 105 (321)
T ss_dssp --CCSCCCCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCS--SHHHHHHHHHHGGGSCCCTTBCCEEEECC
T ss_pred eecHHHHHHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccCh--HHHHHHHHHHHHHHhCCCCCEeeEEEEEc
Confidence 3455566678999999999999999999999988899999999876532 356789999999876
Q ss_pred --------------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeec
Q 042825 473 --------------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFG 514 (631)
Q Consensus 473 --------------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFG 514 (631)
|+|.+++... ......++|..+..++.++++| +.+||+|||
T Consensus 106 ~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg 184 (321)
T 2qkw_B 106 ERNEMILIYKYMENGNLKRHLYGS-DLPTMSMSWEQRLEICIGAARGLHYLHTRAIIHRDVKSINILLDENFVPKITDFG 184 (321)
T ss_dssp CTTCCEEEEECCTTCBTGGGSSSS-CCCSCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCSTTEEECTTCCEEECCCT
T ss_pred CCCeEEEEEEcCCCCcHHHHHhcc-CCCccccCHHHHHHHHHHHHHHHHHhcCCCeecCCCCHHHEEECCCCCEEEeecc
Confidence 4555555321 1112358999999999888876 467899999
Q ss_pred cccccCCCCccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHhHhhh--
Q 042825 515 LVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQKMH-- 592 (631)
Q Consensus 515 la~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~~~~~-- 592 (631)
+++...............||+.|+|||++.+..++.++|||||||++|||+||+.||....... ......|.....
T Consensus 185 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~--~~~~~~~~~~~~~~ 262 (321)
T 2qkw_B 185 ISKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPRE--MVNLAEWAVESHNN 262 (321)
T ss_dssp TCEECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSS--CCCHHHHTHHHHTT
T ss_pred cccccccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHH--HHHHHHHhhhcccc
Confidence 9987542222223345679999999999998899999999999999999999999997543321 111222221100
Q ss_pred -----------------cCChhHHHHHHhhcCCChhhHHhHHHHHHHHH
Q 042825 593 -----------------KNHDTFQMAIDKTIQLDEENLANVSTVAELGD 624 (631)
Q Consensus 593 -----------------~~~~~l~~~id~~L~~d~~~r~~~~~vl~lal 624 (631)
.....+.+++.+|+..||++||++.++++.--
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~ 311 (321)
T 2qkw_B 263 GQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLE 311 (321)
T ss_dssp TCCCSSSSSSCTTCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred ccHHHhcChhhccccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHH
Confidence 01235789999999999999999999887543
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} | Back alignment and structure |
|---|
Probab=99.91 E-value=5.9e-25 Score=249.25 Aligned_cols=198 Identities=16% Similarity=0.214 Sum_probs=141.0
Q ss_pred CChhhHHHHHHHHHhCCCCCC----------CCC-CCCCCCCc---cceeeCCCCCeEEEEeCCCCCcccCcchhcCCcc
Q 042825 57 QSRPDAAVMQDLKASFVIPKR----------LKW-SDPDPCQW---SHVICSDDGQVTNIELQDQNRKGTVPPILKKLSS 122 (631)
Q Consensus 57 ~~~~~~~~l~~~k~~~~~~~~----------~~w-~~~~~C~w---~gv~C~~~~~l~~l~l~~n~l~g~ip~~~~~l~~ 122 (631)
....|..||.+++.++..+.+ .+| .+.++|.| .||+|+..++|+.|+|++++++|.+|+++++|++
T Consensus 27 ~~~~d~~aL~~~~~~~~~~~w~~~~~~~~~~~~W~~~~~~c~w~~~~GV~C~~~~~V~~L~L~~~~l~g~lp~~l~~L~~ 106 (636)
T 4eco_A 27 EYIKDYLALKEIWDALNGKNWSQQGFGTQPGANWNFNKELDMWGAQPGVSLNSNGRVTGLSLEGFGASGRVPDAIGQLTE 106 (636)
T ss_dssp HHHHHHHHHHHHHHHTTGGGCCCCC------CCCCCSSCGGGTTCCTTEEECTTCCEEEEECTTSCCEEEECGGGGGCTT
T ss_pred hHHHHHHHHHHHHHHcCCCCcccCCcCCccCCCCCCCCCcccccCCCCeEEcCCCCEEEEEecCcccCCcCChHHhcCcc
Confidence 345689999999999865432 268 45789999 9999988899999999999999999999999999
Q ss_pred CceeecccCcc---------------------------------------------------------------------
Q 042825 123 MAVMYLENNQL--------------------------------------------------------------------- 133 (631)
Q Consensus 123 L~~L~L~~N~l--------------------------------------------------------------------- 133 (631)
|++|+|++|.+
T Consensus 107 L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~~~~l~l~l~~~~l~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~l~~l 186 (636)
T 4eco_A 107 LEVLALGSHGEKVNERLFGPKGISANMSDEQKQKMRMHYQKTFVDYDPREDFSDLIKDCINSDPQQKSIKKSSRITLKDT 186 (636)
T ss_dssp CCEEESCCGGGGGTCCSBSTTSBCTTCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHHCTTSCCCCCCCCCCCCTT
T ss_pred ceEEECcCCccccCCccccccccccCchHHHHHHHHhhHHHhhhccCchhhHHHHHHHHhhcCccccccccccccchhhh
Confidence 99999999854
Q ss_pred ---------cCCCCcCcc---cccccccccccceec-----------------CCCCCCcCCCCCCcEEEccCCcccccC
Q 042825 134 ---------RGPIPSLVG---SLEFFSAYEANISGT-----------------IPDFIGTDTFPQLSYLDLGNNNLQGTI 184 (631)
Q Consensus 134 ---------~g~lP~~~~---~L~~L~l~~n~l~g~-----------------ip~~~~~~~l~~L~~L~Ls~N~l~g~i 184 (631)
+| ||..++ +|++|+|++|+++|. +|+.++...+++|++|+|++|++.|.+
T Consensus 187 ~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~ 265 (636)
T 4eco_A 187 QIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKL 265 (636)
T ss_dssp TTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSC
T ss_pred hhccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCccC
Confidence 34 666554 677777777777775 777665224677777777777777777
Q ss_pred CCCCCCCccCcCCCCCCCEEEeecCc-Ccc-cCChhhccCC------CCCCEEEccCCCCcccCCC---CCCCCceEEee
Q 042825 185 PSSFGMPFADISNLSTLEDLSLGHNK-LTG-IFPVSSFNNH------PKLTTLNLTNNLLQGPTPR---FNNSKLTVDMR 253 (631)
Q Consensus 185 P~~~~~~~~~~~~l~~L~~L~L~~N~-l~g-~iP~~~~~~l------~~L~~L~ls~N~l~g~~p~---~~~~~~~~~l~ 253 (631)
|..++ ++++|++|+|++|+ ++| .+|.. ++.+ ++|+.|+|++|+++ .+|. +..+.....++
T Consensus 266 p~~l~-------~l~~L~~L~Ls~n~~l~~~~lp~~-~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L~ 336 (636)
T 4eco_A 266 PTFLK-------ALPEMQLINVACNRGISGEQLKDD-WQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGMLE 336 (636)
T ss_dssp CTTTT-------TCSSCCEEECTTCTTSCHHHHHHH-HHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCEEE
T ss_pred hHHHh-------cCCCCCEEECcCCCCCccccchHH-HHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCCEEe
Confidence 76543 66666666666666 666 56644 4443 56666666666666 4444 33333344455
Q ss_pred cCCCcccCCCC
Q 042825 254 TGSNCFCLDDP 264 (631)
Q Consensus 254 ~~~n~~~~~~~ 264 (631)
+++|.+.|.+|
T Consensus 337 L~~N~l~g~ip 347 (636)
T 4eco_A 337 CLYNQLEGKLP 347 (636)
T ss_dssp CCSCCCEEECC
T ss_pred CcCCcCccchh
Confidence 56666665555
|
| >3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=4.7e-24 Score=220.28 Aligned_cols=200 Identities=21% Similarity=0.299 Sum_probs=146.4
Q ss_pred hhcCCcccceeecCCCceEEEEEEecCCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc----------------------
Q 042825 415 NATNNFSEENRLGRGGVGTVYKGELKDGTEVGVKRMELGSVTEQGIAQFESEITVLTK---------------------- 472 (631)
Q Consensus 415 ~~t~~f~~~~~iG~G~fg~Vyk~~~~~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~---------------------- 472 (631)
...++|+..+.||+|+||+||+|+..+|+.||||++..........+.+.+|++++.+
T Consensus 18 ~l~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 97 (311)
T 3niz_A 18 GLMEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLV 97 (311)
T ss_dssp CSSCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEE
T ss_pred chHhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEE
Confidence 3457899999999999999999999889999999997654444445778899999876
Q ss_pred -----CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCC
Q 042825 473 -----GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENG 523 (631)
Q Consensus 473 -----gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~ 523 (631)
|++.+++. .....+++.....++.+++.| +.+||+|||+++.....
T Consensus 98 ~e~~~~~l~~~~~----~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~- 172 (311)
T 3niz_A 98 FEFMEKDLKKVLD----ENKTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIP- 172 (311)
T ss_dssp EECCSEEHHHHHH----TCTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEETTSC-
T ss_pred EcCCCCCHHHHHH----hccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCchHhEEECCCCCEEEccCcCceecCCC-
Confidence 33333332 233458888888888888765 56899999999876422
Q ss_pred ccccccccccCccccccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHh--------------
Q 042825 524 KHSILTKVAGTFGYLAPEYIVT-GRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWF-------------- 588 (631)
Q Consensus 524 ~~~~~~~~~gt~~Y~aPE~~~~-~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~-------------- 588 (631)
........||+.|+|||++.+ ..++.++||||+||++|||++|+.||.+....+.. ..+....
T Consensus 173 -~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~-~~i~~~~~~~~~~~~~~~~~~ 250 (311)
T 3niz_A 173 -VRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQL-PKIFSILGTPNPREWPQVQEL 250 (311)
T ss_dssp -CC---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHH-HHHHHHHCCCCTTTSGGGTTS
T ss_pred -cccccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHH-HHHHHHHCCCChHHhhhhhcc
Confidence 122345678999999999876 56899999999999999999999999876544322 2221110
Q ss_pred -----------------HhhhcCChhHHHHHHhhcCCChhhHHhHHHHHH
Q 042825 589 -----------------QKMHKNHDTFQMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 589 -----------------~~~~~~~~~l~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
......++++.+++.+||..||.+|+++.++++
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 300 (311)
T 3niz_A 251 PLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMN 300 (311)
T ss_dssp HHHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred chhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 001112357889999999999999999998875
|
| >2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=4.3e-24 Score=221.60 Aligned_cols=205 Identities=18% Similarity=0.287 Sum_probs=155.9
Q ss_pred CCcCHHHHHhhcCC----------cccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc--
Q 042825 406 MAIPIQVLRNATNN----------FSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK-- 472 (631)
Q Consensus 406 ~~~~~~~l~~~t~~----------f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~-- 472 (631)
..+++++++.+++. |+..+.||+|+||.||+|+.. +|+.||||++..... ...+.+.+|+.++.+
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~ 100 (321)
T 2c30_A 23 GVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQ--QRRELLFNEVVIMRDYQ 100 (321)
T ss_dssp --CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC--CSHHHHHHHHHHHTTCC
T ss_pred CcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccch--hHHHHHHHHHHHHHhCC
Confidence 35788888888764 777889999999999999976 699999999976542 235678899999876
Q ss_pred --------------------------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC---------------------
Q 042825 473 --------------------------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG--------------------- 505 (631)
Q Consensus 473 --------------------------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g--------------------- 505 (631)
|+|.+++. ...+++..+..++.+++.|
T Consensus 101 h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~------~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll 174 (321)
T 2c30_A 101 HFNVVEMYKSYLVGEELWVLMEFLQGGALTDIVS------QVRLNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDSILL 174 (321)
T ss_dssp CTTBCCEEEEEEETTEEEEEECCCCSCBHHHHHT------TCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE
T ss_pred CCCcceEEEEEEECCEEEEEEecCCCCCHHHHHH------hcCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE
Confidence 45555542 1358999999999888865
Q ss_pred ---CCcEEEeeccccccCCCCccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHH
Q 042825 506 ---DDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYII 582 (631)
Q Consensus 506 ---~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~ 582 (631)
+.+||+|||+++...... .......||+.|+|||++.+..++.++|||||||++|||++|+.||....... ...
T Consensus 175 ~~~~~~kl~Dfg~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~-~~~ 251 (321)
T 2c30_A 175 TLDGRVKLSDFGFCAQISKDV--PKRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQ-AMK 251 (321)
T ss_dssp CTTCCEEECCCTTCEECCSSS--CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH-HHH
T ss_pred CCCCcEEEeeeeeeeecccCc--cccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-HHH
Confidence 568999999998764221 22345689999999999999899999999999999999999999997543211 111
Q ss_pred HHHHHhH----hhhcCChhHHHHHHhhcCCChhhHHhHHHHHH
Q 042825 583 HLATWFQ----KMHKNHDTFQMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 583 ~l~~~~~----~~~~~~~~l~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
.+..... .....++++.+++.+||..||.+|+++.++++
T Consensus 252 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 294 (321)
T 2c30_A 252 RLRDSPPPKLKNSHKVSPVLRDFLERMLVRDPQERATAQELLD 294 (321)
T ss_dssp HHHHSSCCCCTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred HHhcCCCCCcCccccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 1221111 11123467899999999999999999999875
|
| >3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=3.7e-24 Score=220.88 Aligned_cols=204 Identities=26% Similarity=0.367 Sum_probs=144.9
Q ss_pred hhcCCcccceeecCCCceEEEEEEecCCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc----------------------
Q 042825 415 NATNNFSEENRLGRGGVGTVYKGELKDGTEVGVKRMELGSVTEQGIAQFESEITVLTK---------------------- 472 (631)
Q Consensus 415 ~~t~~f~~~~~iG~G~fg~Vyk~~~~~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~---------------------- 472 (631)
...++|+..+.||+|+||+||+|+. .|+.||||++..........++|.+|++++.+
T Consensus 34 i~~~~y~i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 112 (309)
T 3p86_A 34 IPWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIV 112 (309)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEEE
T ss_pred CChhHceeeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEEE
Confidence 4456899999999999999999987 58899999998776666677889999999876
Q ss_pred ------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC--------------------------CCcEEEeeccccccC
Q 042825 473 ------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG--------------------------DDMRVADFGLVRLVP 520 (631)
Q Consensus 473 ------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g--------------------------~~~kl~DFGla~~~~ 520 (631)
|+|.+++.... ....+++..+..++.+++.| +.+||+|||+++...
T Consensus 113 ~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~ 190 (309)
T 3p86_A 113 TEYLSRGSLYRLLHKSG--AREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKA 190 (309)
T ss_dssp EECCTTCBHHHHHHSTT--HHHHSCHHHHHHHHHHHHHHHHHHHTSSSCCCCTTCCGGGEEECTTCCEEECCCC------
T ss_pred EecCCCCcHHHHHhhcC--CCCCCCHHHHHHHHHHHHHHHHHHHcCCCCEECCCCChhhEEEeCCCcEEECCCCCCcccc
Confidence 56766664311 01237888888888777654 357899999998653
Q ss_pred CCCccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHhHh----hhcCCh
Q 042825 521 ENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQK----MHKNHD 596 (631)
Q Consensus 521 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~~~----~~~~~~ 596 (631)
.. ........||+.|+|||++.+..++.++|||||||++|||+||+.||...... ........... ....+.
T Consensus 191 ~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 266 (309)
T 3p86_A 191 ST--FLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPA--QVVAAVGFKCKRLEIPRNLNP 266 (309)
T ss_dssp -------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHH--HHHHHHHHSCCCCCCCTTSCH
T ss_pred cc--ccccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHhcCCCCCCCccCCH
Confidence 21 12234567999999999999999999999999999999999999999865322 11111111111 112246
Q ss_pred hHHHHHHhhcCCChhhHHhHHHHHHHHHh
Q 042825 597 TFQMAIDKTIQLDEENLANVSTVAELGDH 625 (631)
Q Consensus 597 ~l~~~id~~L~~d~~~r~~~~~vl~lal~ 625 (631)
++.+++.+|+..||.+|+++.++++....
T Consensus 267 ~l~~li~~~l~~dP~~Rps~~~ll~~L~~ 295 (309)
T 3p86_A 267 QVAAIIEGCWTNEPWKRPSFATIMDLLRP 295 (309)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred HHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence 89999999999999999999998876443
|
| >2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B | Back alignment and structure |
|---|
Probab=99.90 E-value=6.8e-24 Score=223.88 Aligned_cols=202 Identities=19% Similarity=0.289 Sum_probs=154.9
Q ss_pred hcCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc----------------------
Q 042825 416 ATNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK---------------------- 472 (631)
Q Consensus 416 ~t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~---------------------- 472 (631)
..++|...+.||+|+||.||+|+.+ +|+.||||++..........+.+.+|++++.+
T Consensus 27 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv 106 (362)
T 2bdw_A 27 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLV 106 (362)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred cccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 4567999999999999999999976 58999999998776666677889999999876
Q ss_pred ------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC---------------------------CCcEEEeecccccc
Q 042825 473 ------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG---------------------------DDMRVADFGLVRLV 519 (631)
Q Consensus 473 ------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g---------------------------~~~kl~DFGla~~~ 519 (631)
|+|.+++. ....+++.....++.+++.| ..+||+|||+++..
T Consensus 107 ~e~~~gg~L~~~l~-----~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~ 181 (362)
T 2bdw_A 107 FDLVTGGELFEDIV-----AREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEV 181 (362)
T ss_dssp ECCCCSCBHHHHHT-----TCSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEESCSSTTCCEEECCCTTCBCC
T ss_pred EecCCCCCHHHHHH-----HcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCCCCCCEEEeecCcceEe
Confidence 45555553 12457888888888887765 23899999999876
Q ss_pred CCCCccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHh----H-hhhcC
Q 042825 520 PENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWF----Q-KMHKN 594 (631)
Q Consensus 520 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~----~-~~~~~ 594 (631)
... .......||+.|+|||++.+..++.++||||+||++|||++|+.||.+..... ....+.... . .....
T Consensus 182 ~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~-~~~~i~~~~~~~~~~~~~~~ 257 (362)
T 2bdw_A 182 NDS---EAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHR-LYAQIKAGAYDYPSPEWDTV 257 (362)
T ss_dssp TTC---CSCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHTCCCCCTTGGGGS
T ss_pred cCC---cccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHH-HHHHHHhCCCCCCcccccCC
Confidence 422 12345689999999999998899999999999999999999999998643211 111111110 0 00123
Q ss_pred ChhHHHHHHhhcCCChhhHHhHHHHHHHHHhh
Q 042825 595 HDTFQMAIDKTIQLDEENLANVSTVAELGDHC 626 (631)
Q Consensus 595 ~~~l~~~id~~L~~d~~~r~~~~~vl~lal~C 626 (631)
++++.++|.++|..||.+|+++.++++..+.|
T Consensus 258 ~~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~ 289 (362)
T 2bdw_A 258 TPEAKSLIDSMLTVNPKKRITADQALKVPWIC 289 (362)
T ss_dssp CHHHHHHHHHHSCSSGGGSCCHHHHTTSHHHH
T ss_pred CHHHHHHHHHHcCCChhhCcCHHHHhcCcccC
Confidence 56899999999999999999999988766554
|
| >2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A | Back alignment and structure |
|---|
Probab=99.90 E-value=1.5e-23 Score=221.88 Aligned_cols=207 Identities=21% Similarity=0.287 Sum_probs=154.0
Q ss_pred cCCcccceeecCCCceEEEEEEec--------CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc----------------
Q 042825 417 TNNFSEENRLGRGGVGTVYKGELK--------DGTEVGVKRMELGSVTEQGIAQFESEITVLTK---------------- 472 (631)
Q Consensus 417 t~~f~~~~~iG~G~fg~Vyk~~~~--------~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~---------------- 472 (631)
.++|...+.||+|+||.||+|+.. ++..||||+++... .....+++.+|++++.+
T Consensus 80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~ 158 (370)
T 2psq_A 80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDA-TEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ 158 (370)
T ss_dssp GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTC-BHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECS
T ss_pred HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCc-CHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEcc
Confidence 467889999999999999999852 35689999997653 44567789999998864
Q ss_pred -------------CChhHHhHhhhh-----------cCCCCCCHHHHHHHHHHhhcC-----------------------
Q 042825 473 -------------GTLGRHLFNWEE-----------EGLEPLEWNTRLNIALDVARG----------------------- 505 (631)
Q Consensus 473 -------------gsL~~~L~~~~~-----------~~~~~L~~~~~~~I~~~ia~g----------------------- 505 (631)
|+|.+++..... .....+++.....++.++++|
T Consensus 159 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~ 238 (370)
T 2psq_A 159 DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTE 238 (370)
T ss_dssp SSSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECT
T ss_pred CCCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchhhEEECC
Confidence 678777754211 012358899999999888876
Q ss_pred -CCcEEEeeccccccCCCCccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChHHHHH
Q 042825 506 -DDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT-GRKVVDATHSDPEYIIH 583 (631)
Q Consensus 506 -~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~Ellt-G~~P~~~~~~~~~~~~~ 583 (631)
+.+||+|||+++...............+|+.|+|||++.+..++.++|||||||++|||+| |+.||.+....+. ...
T Consensus 239 ~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~~~-~~~ 317 (370)
T 2psq_A 239 NNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEEL-FKL 317 (370)
T ss_dssp TCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGH-HHH
T ss_pred CCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHHHH-HHH
Confidence 5689999999987643322223344568899999999999999999999999999999999 9999986543321 111
Q ss_pred HHHHhH--hhhcCChhHHHHHHhhcCCChhhHHhHHHHHHHHHh
Q 042825 584 LATWFQ--KMHKNHDTFQMAIDKTIQLDEENLANVSTVAELGDH 625 (631)
Q Consensus 584 l~~~~~--~~~~~~~~l~~~id~~L~~d~~~r~~~~~vl~lal~ 625 (631)
+..... .....+.++.+++.+|+..||.+|+++.++++..-.
T Consensus 318 ~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~ 361 (370)
T 2psq_A 318 LKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDR 361 (370)
T ss_dssp HHTTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred HhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence 111110 111224589999999999999999999998875443
|
| >3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=8e-24 Score=222.67 Aligned_cols=218 Identities=20% Similarity=0.257 Sum_probs=161.4
Q ss_pred cCHHHHHhhcCCcccceeecCCCceEEEEEEec------CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc---------
Q 042825 408 IPIQVLRNATNNFSEENRLGRGGVGTVYKGELK------DGTEVGVKRMELGSVTEQGIAQFESEITVLTK--------- 472 (631)
Q Consensus 408 ~~~~~l~~~t~~f~~~~~iG~G~fg~Vyk~~~~------~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~--------- 472 (631)
+...+++...++|...+.||+|+||.||+|++. +++.||||++.... .....+++.+|++++.+
T Consensus 12 ~~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~hpniv~ 90 (359)
T 3vhe_A 12 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA-THSEHRALMSELKILIHIGHHLNVVN 90 (359)
T ss_dssp CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC-CHHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred CCcccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcC-CHHHHHHHHHHHHHHHhhcCCcceee
Confidence 455666677889999999999999999999842 46899999997643 34456789999998865
Q ss_pred ---------------------CChhHHhHhhhhcC---------------------------------------------
Q 042825 473 ---------------------GTLGRHLFNWEEEG--------------------------------------------- 486 (631)
Q Consensus 473 ---------------------gsL~~~L~~~~~~~--------------------------------------------- 486 (631)
|+|.+++.......
T Consensus 91 ~~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (359)
T 3vhe_A 91 LLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEE 170 (359)
T ss_dssp EEEEECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC-----------------------------------------
T ss_pred eeeeeecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccc
Confidence 56666665321100
Q ss_pred ----------------CCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCCccc
Q 042825 487 ----------------LEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENGKHS 526 (631)
Q Consensus 487 ----------------~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~~~~ 526 (631)
...+++.....++.+++.| +.+||+|||+++.........
T Consensus 171 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~ 250 (359)
T 3vhe_A 171 KSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYV 250 (359)
T ss_dssp -------------CTTTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTTCE
T ss_pred cccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcCCCcEEEEeccceeeecccccch
Confidence 1127888888898888876 457899999998764333333
Q ss_pred cccccccCcccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChHHHHHHHHHhHhh--hcCChhHHHHHH
Q 042825 527 ILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT-GRKVVDATHSDPEYIIHLATWFQKM--HKNHDTFQMAID 603 (631)
Q Consensus 527 ~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~Ellt-G~~P~~~~~~~~~~~~~l~~~~~~~--~~~~~~l~~~id 603 (631)
......||+.|+|||++.+..++.++|||||||++|||+| |+.||.+..........+....... ...++++.+++.
T Consensus 251 ~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 330 (359)
T 3vhe_A 251 RKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTML 330 (359)
T ss_dssp EC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHHTCCCCCCTTCCHHHHHHHH
T ss_pred hccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHHHHHHHHcCCCCCCCCCCCHHHHHHHH
Confidence 3455678999999999999999999999999999999999 9999987655543322222211111 123468999999
Q ss_pred hhcCCChhhHHhHHHHHHHHHhh
Q 042825 604 KTIQLDEENLANVSTVAELGDHC 626 (631)
Q Consensus 604 ~~L~~d~~~r~~~~~vl~lal~C 626 (631)
.|+..||.+|+++.++++..-..
T Consensus 331 ~~l~~dP~~Rps~~ell~~L~~~ 353 (359)
T 3vhe_A 331 DCWHGEPSQRPTFSELVEHLGNL 353 (359)
T ss_dssp HHTCSSGGGSCCHHHHHHHHHHH
T ss_pred HHccCChhhCCCHHHHHHHHHHH
Confidence 99999999999999998765443
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.90 E-value=2e-24 Score=250.38 Aligned_cols=77 Identities=18% Similarity=0.329 Sum_probs=68.3
Q ss_pred CChhhHHHHHHHHHhCCCCCCCCCCC------CCC--CCc------------cceeeCCCCCeEEEEeCCCCCcccCcch
Q 042825 57 QSRPDAAVMQDLKASFVIPKRLKWSD------PDP--CQW------------SHVICSDDGQVTNIELQDQNRKGTVPPI 116 (631)
Q Consensus 57 ~~~~~~~~l~~~k~~~~~~~~~~w~~------~~~--C~w------------~gv~C~~~~~l~~l~l~~n~l~g~ip~~ 116 (631)
....|..||++||.++.+| +|+. .+| |.| .||+|+..++|+.|+|+++++.|.+|+.
T Consensus 266 ~~~~d~~ALl~~k~~l~~~---~W~~~~~~~~~~~~~C~W~~~~~~~~w~~~~GV~C~~~~~V~~L~Ls~~~L~G~ip~~ 342 (876)
T 4ecn_A 266 EYIKDYKALKAIWEALDGK---NWRYYSGTINNTIHSLNWNFNKELDMWGDQPGVDLDNNGRVTGLSLAGFGAKGRVPDA 342 (876)
T ss_dssp HHHHHHHHHHHHHHHTTGG---GCCCCCSSCSSCCCCCSCCCSSCGGGTTCCTTEEECTTSCEEEEECTTTCCEEEECGG
T ss_pred cchHHHHHHHHHHHHcCCC---CCCcCCCcccccCCccccccccccccccCcCceEecCCCCEEEEECccCCCCCcCchH
Confidence 4457999999999999877 6732 356 999 9999987889999999999999999999
Q ss_pred hcCCccCceeec-ccCcccCC
Q 042825 117 LKKLSSMAVMYL-ENNQLRGP 136 (631)
Q Consensus 117 ~~~l~~L~~L~L-~~N~l~g~ 136 (631)
|++|++|++|+| ++|.++|.
T Consensus 343 l~~L~~L~~LdLss~N~lsG~ 363 (876)
T 4ecn_A 343 IGQLTELKVLSFGTHSETVSG 363 (876)
T ss_dssp GGGCTTCCEEESCCTTHHHHT
T ss_pred HhccccceEeeeccccccccc
Confidence 999999999999 88888776
|
| >1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... | Back alignment and structure |
|---|
Probab=99.90 E-value=4.1e-24 Score=223.19 Aligned_cols=197 Identities=19% Similarity=0.265 Sum_probs=145.5
Q ss_pred cCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCC-CHHHHHHHHHHHHHHhc----------------------
Q 042825 417 TNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSV-TEQGIAQFESEITVLTK---------------------- 472 (631)
Q Consensus 417 t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~-~~~~~~~~~~Ei~~l~~---------------------- 472 (631)
.++|+..+.||+|+||+||+|+.+ +|+.||||+++.... .....+.+.+|++++.+
T Consensus 4 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv 83 (337)
T 1o6l_A 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFV 83 (337)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEE
T ss_pred hHHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEE
Confidence 357899999999999999999976 599999999975321 11234678889998876
Q ss_pred ------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCC
Q 042825 473 ------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPEN 522 (631)
Q Consensus 473 ------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~ 522 (631)
|+|..++.. ...+++.....++.+++.| +.+||+|||+++.....
T Consensus 84 ~E~~~gg~L~~~l~~-----~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~ 158 (337)
T 1o6l_A 84 MEYANGGELFFHLSR-----ERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD 158 (337)
T ss_dssp EECCTTCBHHHHHHH-----HSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCT
T ss_pred EeCCCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCcCCHHHEEECCCCCEEEeeccchhhcccC
Confidence 566666642 1356777777777777665 56899999999864322
Q ss_pred CccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHH-HhHhhhcCChhHHHH
Q 042825 523 GKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLAT-WFQKMHKNHDTFQMA 601 (631)
Q Consensus 523 ~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~-~~~~~~~~~~~l~~~ 601 (631)
. ......+||+.|+|||++.+..++.++||||+||++|||++|+.||........ ...+.. ........++++.++
T Consensus 159 ~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~-~~~i~~~~~~~p~~~s~~~~~l 235 (337)
T 1o6l_A 159 G--ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERL-FELILMEEIRFPRTLSPEAKSL 235 (337)
T ss_dssp T--CCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HHHHHHCCCCCCTTSCHHHHHH
T ss_pred C--CcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCHHHH-HHHHHcCCCCCCCCCCHHHHHH
Confidence 1 234567899999999999999999999999999999999999999986432211 111111 111111235789999
Q ss_pred HHhhcCCChhhHH-----hHHHHHH
Q 042825 602 IDKTIQLDEENLA-----NVSTVAE 621 (631)
Q Consensus 602 id~~L~~d~~~r~-----~~~~vl~ 621 (631)
|.++|..||.+|+ ++.++++
T Consensus 236 i~~lL~~dP~~R~g~~~~~~~ei~~ 260 (337)
T 1o6l_A 236 LAGLLKKDPKQRLGGGPSDAKEVME 260 (337)
T ss_dssp HHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred HHHHhhcCHHHhcCCCCCCHHHHHc
Confidence 9999999999998 7887764
|
| >3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A | Back alignment and structure |
|---|
Probab=99.90 E-value=2.3e-23 Score=212.76 Aligned_cols=198 Identities=16% Similarity=0.247 Sum_probs=147.5
Q ss_pred CCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc------------------------
Q 042825 418 NNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK------------------------ 472 (631)
Q Consensus 418 ~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~------------------------ 472 (631)
++|+..+.||+|+||+||+|+.. +|+.||||++..........+.+.+|++++.+
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 81 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE 81 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEe
Confidence 57899999999999999999976 58999999998766555566788999999877
Q ss_pred ---CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCCcc
Q 042825 473 ---GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENGKH 525 (631)
Q Consensus 473 ---gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~~~ 525 (631)
|++.+.+. .....+++.....++.+++.| +.+||+|||+++..... .
T Consensus 82 ~~~~~l~~~~~----~~~~~l~~~~~~~~~~ql~~~l~~lH~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~--~ 155 (292)
T 3o0g_A 82 FCDQDLKKYFD----SCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIP--V 155 (292)
T ss_dssp CCSEEHHHHHH----HTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCSC--C
T ss_pred cCCCCHHHHHH----hCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeecccceecCCc--c
Confidence 23333322 223568888888888888766 56899999999876422 2
Q ss_pred ccccccccCcccccccccccCC-CCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHhHh--------------
Q 042825 526 SILTKVAGTFGYLAPEYIVTGR-ITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQK-------------- 590 (631)
Q Consensus 526 ~~~~~~~gt~~Y~aPE~~~~~~-~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~~~-------------- 590 (631)
.......||+.|+|||++.+.. ++.++||||+||++|||++|+.||............+......
T Consensus 156 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 235 (292)
T 3o0g_A 156 RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPD 235 (292)
T ss_dssp SCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTT
T ss_pred ccccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhhhhhccccc
Confidence 2334567899999999997766 8999999999999999999988865433322222222211100
Q ss_pred ----------------hhcCChhHHHHHHhhcCCChhhHHhHHHHHH
Q 042825 591 ----------------MHKNHDTFQMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 591 ----------------~~~~~~~l~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
....+.++.+++.++|..||.+|+++.++++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 282 (292)
T 3o0g_A 236 YKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ 282 (292)
T ss_dssp CCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred ccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhc
Confidence 0012457889999999999999999998875
|
| >3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.90 E-value=9.3e-24 Score=228.55 Aligned_cols=199 Identities=18% Similarity=0.219 Sum_probs=150.6
Q ss_pred hhcCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc---------------------
Q 042825 415 NATNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK--------------------- 472 (631)
Q Consensus 415 ~~t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~--------------------- 472 (631)
...++|+..+.||+|+||+||+|+.. +|+.||+|++..........+.+.+|++++.+
T Consensus 8 ~~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~l 87 (444)
T 3soa_A 8 RFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYL 87 (444)
T ss_dssp HHHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEE
T ss_pred cccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEE
Confidence 34567999999999999999999865 68999999998776666667789999999876
Q ss_pred -------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC---------------------------CCcEEEeeccccc
Q 042825 473 -------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG---------------------------DDMRVADFGLVRL 518 (631)
Q Consensus 473 -------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g---------------------------~~~kl~DFGla~~ 518 (631)
|+|.+.+.. ...+++.....++.+++.| +.+||+|||+++.
T Consensus 88 v~E~~~gg~L~~~i~~-----~~~~~e~~~~~i~~qil~aL~~lH~~givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~ 162 (444)
T 3soa_A 88 IFDLVTGGELFEDIVA-----REYYSEADASHCIQQILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIE 162 (444)
T ss_dssp EECCCBCCBHHHHHHH-----CSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSSTTEEESBSSTTCCEEECCCSSCBC
T ss_pred EEEeCCCCCHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEeccCCCCcEEEccCceeEE
Confidence 566666542 2457888888888777765 3479999999987
Q ss_pred cCCCCccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHh----Hhh-hc
Q 042825 519 VPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWF----QKM-HK 593 (631)
Q Consensus 519 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~----~~~-~~ 593 (631)
.... ........||+.|+|||++.+..++.++||||+||++|||++|+.||.+..... ....+..-. ... ..
T Consensus 163 ~~~~--~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~~-~~~~i~~~~~~~~~~~~~~ 239 (444)
T 3soa_A 163 VEGE--QQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHR-LYQQIKAGAYDFPSPEWDT 239 (444)
T ss_dssp CCTT--CCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHTCCCCCTTTTTT
T ss_pred ecCC--CceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccHHH-HHHHHHhCCCCCCcccccc
Confidence 6422 223345789999999999998899999999999999999999999997643221 111111100 000 12
Q ss_pred CChhHHHHHHhhcCCChhhHHhHHHHHH
Q 042825 594 NHDTFQMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 594 ~~~~l~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
.++++.++|.++|..||.+|+++.++++
T Consensus 240 ~s~~~~~li~~~L~~dP~~Rpta~e~L~ 267 (444)
T 3soa_A 240 VTPEAKDLINKMLTINPSKRITAAEALK 267 (444)
T ss_dssp SCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred CCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 3578999999999999999999999876
|
| >1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A | Back alignment and structure |
|---|
Probab=99.90 E-value=7.3e-24 Score=216.14 Aligned_cols=197 Identities=20% Similarity=0.315 Sum_probs=142.7
Q ss_pred CCcccceeecCCCceEEEEEEecCCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc-------------------------
Q 042825 418 NNFSEENRLGRGGVGTVYKGELKDGTEVGVKRMELGSVTEQGIAQFESEITVLTK------------------------- 472 (631)
Q Consensus 418 ~~f~~~~~iG~G~fg~Vyk~~~~~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~------------------------- 472 (631)
++|...+.||+|+||+||+|+..+|+.||||++..........+.+.+|++++.+
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH 81 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEe
Confidence 5788999999999999999999889999999997654333334678899999876
Q ss_pred --CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCCccc
Q 042825 473 --GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENGKHS 526 (631)
Q Consensus 473 --gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~~~~ 526 (631)
+++.+++. .....+++.....++.+++.| +.+||+|||+++..... ..
T Consensus 82 ~~~~l~~~~~----~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~--~~ 155 (288)
T 1ob3_A 82 LDQDLKKLLD----VCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIP--VR 155 (288)
T ss_dssp CSEEHHHHHH----TSTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC-----
T ss_pred cCCCHHHHHH----hcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEEeECccccccCcc--cc
Confidence 33333332 223468888888888888776 56899999999876321 12
Q ss_pred cccccccCcccccccccccC-CCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHhH----------------
Q 042825 527 ILTKVAGTFGYLAPEYIVTG-RITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQ---------------- 589 (631)
Q Consensus 527 ~~~~~~gt~~Y~aPE~~~~~-~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~~---------------- 589 (631)
......||+.|+|||++.+. .++.++||||+||++|||++|+.||.+..... ....+.....
T Consensus 156 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (288)
T 1ob3_A 156 KYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEAD-QLMRIFRILGTPNSKNWPNVTELPKY 234 (288)
T ss_dssp ------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCCCCTTTSTTGGGSTTC
T ss_pred ccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHHCCCChhhchhhhccccc
Confidence 23445789999999998764 58999999999999999999999998653221 1111211100
Q ss_pred --------------hhhcCChhHHHHHHhhcCCChhhHHhHHHHHH
Q 042825 590 --------------KMHKNHDTFQMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 590 --------------~~~~~~~~l~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
.....++++.+++.+||..||.+|+++.++++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 280 (288)
T 1ob3_A 235 DPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE 280 (288)
T ss_dssp CTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred ccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 00113467889999999999999999998875
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=4.7e-24 Score=247.16 Aligned_cols=204 Identities=23% Similarity=0.307 Sum_probs=137.4
Q ss_pred CChhhHHHHHHHHHhCCCCCCC-CC-CCCCCCCccceeeCCCCCeEEEEeCCCCCccc---Ccc----------------
Q 042825 57 QSRPDAAVMQDLKASFVIPKRL-KW-SDPDPCQWSHVICSDDGQVTNIELQDQNRKGT---VPP---------------- 115 (631)
Q Consensus 57 ~~~~~~~~l~~~k~~~~~~~~~-~w-~~~~~C~w~gv~C~~~~~l~~l~l~~n~l~g~---ip~---------------- 115 (631)
....|..||++||+.+.+|..+ +| .+.|||.|.||+|+ .++|+.|+|+++++.|. +|+
T Consensus 9 ~~~~~~~all~~k~~~~~~~~l~~W~~~~~~C~w~gv~C~-~~~v~~L~L~~~~l~g~~~~l~~~l~~L~~L~~l~~~~~ 87 (768)
T 3rgz_A 9 SLYREIHQLISFKDVLPDKNLLPDWSSNKNPCTFDGVTCR-DDKVTSIDLSSKPLNVGFSAVSSSLLSLTGLESLFLSNS 87 (768)
T ss_dssp CHHHHHHHHHHHHTTCSCTTSSTTCCTTSCGGGSTTEEEE-TTEEEEEECTTSCCCEEHHHHHHHTTTCTTCCEEECTTS
T ss_pred CCHHHHHHHHHHHhhCCCcccccCCCCCCCCcCCcceEEC-CCcEEEEECCCCCcCCccCccChhHhccCcccccCCcCC
Confidence 4567899999999999877533 89 46799999999997 78999999999999987 654
Q ss_pred -------hhcCCccCceeecccCcccCCCCc--Ccc---cccccccccccceecCCCCC-CcCCCCCCcEEEccCCcccc
Q 042825 116 -------ILKKLSSMAVMYLENNQLRGPIPS--LVG---SLEFFSAYEANISGTIPDFI-GTDTFPQLSYLDLGNNNLQG 182 (631)
Q Consensus 116 -------~~~~l~~L~~L~L~~N~l~g~lP~--~~~---~L~~L~l~~n~l~g~ip~~~-~~~~l~~L~~L~Ls~N~l~g 182 (631)
.++++++|++|+|++|.++|.+|. .++ +|++|++++|++++.+|..+ . .+++|++|||++|+++|
T Consensus 88 ~~~~l~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~--~l~~L~~L~Ls~n~l~~ 165 (768)
T 3rgz_A 88 HINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGL--KLNSLEVLDLSANSISG 165 (768)
T ss_dssp CEEECCCCCCCCTTCCEEECCSSEEEEEGGGGGGGGGCTTCCEEECCSSEEECCSSCCSCC--CCTTCSEEECCSSCCEE
T ss_pred CcCCCchhhccCCCCCEEECCCCcCCCcCCChHHHhCCCCCCEEECcCCccCCcCCHHHhc--cCCCCCEEECCCCccCC
Confidence 556667777777777777776666 444 67777777777777776655 3 56677777777777766
Q ss_pred cCCCC---CCC---------------CccCcCCCCCCCEEEeecCcCcccCChhhccCCCCCCEEEccCCCCcccCCCC-
Q 042825 183 TIPSS---FGM---------------PFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNNLLQGPTPRF- 243 (631)
Q Consensus 183 ~iP~~---~~~---------------~~~~~~~l~~L~~L~L~~N~l~g~iP~~~~~~l~~L~~L~ls~N~l~g~~p~~- 243 (631)
..|.. ++. ....++++++|++|+|++|++++.+|. ++.+++|++|+|++|.+++.+|..
T Consensus 166 ~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~l~~L~~L~Ls~n~l~~~~~~--l~~l~~L~~L~Ls~n~l~~~~~~~l 243 (768)
T 3rgz_A 166 ANVVGWVLSDGCGELKHLAISGNKISGDVDVSRCVNLEFLDVSSNNFSTGIPF--LGDCSALQHLDISGNKLSGDFSRAI 243 (768)
T ss_dssp ETHHHHHHTTCCTTCCEEECCSSEEESCCBCTTCTTCCEEECCSSCCCSCCCB--CTTCCSCCEEECCSSCCCSCHHHHT
T ss_pred cCChhhhhhccCCCCCEEECCCCcccccCCcccCCcCCEEECcCCcCCCCCcc--cccCCCCCEEECcCCcCCCcccHHH
Confidence 55433 110 011124566666666666666665552 566666666666666666655542
Q ss_pred CCCCceEEeecCCCcccCCCCC
Q 042825 244 NNSKLTVDMRTGSNCFCLDDPG 265 (631)
Q Consensus 244 ~~~~~~~~l~~~~n~~~~~~~~ 265 (631)
........+++++|.+.+.+|.
T Consensus 244 ~~l~~L~~L~Ls~n~l~~~~~~ 265 (768)
T 3rgz_A 244 STCTELKLLNISSNQFVGPIPP 265 (768)
T ss_dssp TTCSSCCEEECCSSCCEESCCC
T ss_pred hcCCCCCEEECCCCcccCccCc
Confidence 2223344455666666665544
|
| >3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=1.6e-23 Score=214.73 Aligned_cols=195 Identities=20% Similarity=0.344 Sum_probs=147.5
Q ss_pred hcCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc----------------------
Q 042825 416 ATNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK---------------------- 472 (631)
Q Consensus 416 ~t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~---------------------- 472 (631)
..++|...+.||+|+||+||+|+.. +|+.||||++...... ..+.+.+|+.++.+
T Consensus 18 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 95 (297)
T 3fxz_A 18 PKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQP--KKELIINEILVMRENKNPNIVNYLDSYLVGDELWVV 95 (297)
T ss_dssp GGGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCS--CHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred hhhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeeccccc--HHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEE
Confidence 3467999999999999999999954 6899999999765332 34668889988876
Q ss_pred ------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCC
Q 042825 473 ------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPEN 522 (631)
Q Consensus 473 ------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~ 522 (631)
|+|.+++.. ..+++.....++.+++.| +.+||+|||+++.....
T Consensus 96 ~e~~~~~~L~~~~~~------~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 169 (297)
T 3fxz_A 96 MEYLAGGSLTDVVTE------TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE 169 (297)
T ss_dssp EECCTTCBHHHHHHH------SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCST
T ss_pred EECCCCCCHHHHHhh------cCCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEECCCCCEEEeeCCCceecCCc
Confidence 566666642 247888888888887765 56899999999876432
Q ss_pred CccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHh----HhhhcCChhH
Q 042825 523 GKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWF----QKMHKNHDTF 598 (631)
Q Consensus 523 ~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~----~~~~~~~~~l 598 (631)
. .......||+.|+|||++.+..++.++|||||||++|||+||+.||........ ...+.... ......+..+
T Consensus 170 ~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 246 (297)
T 3fxz_A 170 Q--SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRA-LYLIATNGTPELQNPEKLSAIF 246 (297)
T ss_dssp T--CCBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH-HHHHHHHCSCCCSCGGGSCHHH
T ss_pred c--cccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHhCCCCCCCCccccCHHH
Confidence 2 233456899999999999999999999999999999999999999976432211 11111110 0111234678
Q ss_pred HHHHHhhcCCChhhHHhHHHHHH
Q 042825 599 QMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 599 ~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
.+++.+||..||.+|+++.++++
T Consensus 247 ~~li~~~l~~dp~~Rps~~ell~ 269 (297)
T 3fxz_A 247 RDFLNRCLEMDVEKRGSAKELLQ 269 (297)
T ss_dssp HHHHHHHSCSSTTTSCCHHHHTT
T ss_pred HHHHHHHccCChhHCcCHHHHhh
Confidence 99999999999999999998875
|
| >3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.90 E-value=9.1e-24 Score=218.07 Aligned_cols=192 Identities=20% Similarity=0.244 Sum_probs=142.8
Q ss_pred CCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc------------------------
Q 042825 418 NNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK------------------------ 472 (631)
Q Consensus 418 ~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~------------------------ 472 (631)
++|+..+.||+|+||+||+|+.. +|+.||||++...........++..|+..+.+
T Consensus 57 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv~ 136 (311)
T 3p1a_A 57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQT 136 (311)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEEE
Confidence 57999999999999999999976 69999999987665555555666677665543
Q ss_pred ----CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCCc
Q 042825 473 ----GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENGK 524 (631)
Q Consensus 473 ----gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~~ 524 (631)
+++.+++... ...++|..+..|+.+++.| +.+||+|||+++.....
T Consensus 137 e~~~~~L~~~~~~~----~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~-- 210 (311)
T 3p1a_A 137 ELCGPSLQQHCEAW----GASLPEAQVWGYLRDTLLALAHLHSQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTA-- 210 (311)
T ss_dssp ECCCCBHHHHHHHH----CSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECGGGCEEECCCTTCEECC----
T ss_pred eccCCCHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECCCCCEEEccceeeeecccC--
Confidence 5555555431 3468999999999998876 46789999999876422
Q ss_pred cccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHh---HhhhcCChhHHHH
Q 042825 525 HSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWF---QKMHKNHDTFQMA 601 (631)
Q Consensus 525 ~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~---~~~~~~~~~l~~~ 601 (631)
.......||++|+|||++.+ .++.++|||||||++|||++|+.|+... .....+.... ......++++.++
T Consensus 211 -~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~l~~l 284 (311)
T 3p1a_A 211 -GAGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGG----EGWQQLRQGYLPPEFTAGLSSELRSV 284 (311)
T ss_dssp -----CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSH----HHHHHHTTTCCCHHHHTTSCHHHHHH
T ss_pred -CCCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCc----cHHHHHhccCCCcccccCCCHHHHHH
Confidence 22345679999999998875 7999999999999999999998776532 1111111110 0111235789999
Q ss_pred HHhhcCCChhhHHhHHHHHH
Q 042825 602 IDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 602 id~~L~~d~~~r~~~~~vl~ 621 (631)
+.+||..||.+|+++.++++
T Consensus 285 i~~~L~~dP~~Rpt~~ell~ 304 (311)
T 3p1a_A 285 LVMMLEPDPKLRATAEALLA 304 (311)
T ss_dssp HHHHSCSSTTTSCCHHHHHT
T ss_pred HHHHcCCChhhCcCHHHHHh
Confidence 99999999999999999876
|
| >2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=4e-23 Score=212.41 Aligned_cols=214 Identities=32% Similarity=0.563 Sum_probs=159.4
Q ss_pred CCcCHHHHHhhcCCcccc------eeecCCCceEEEEEEecCCcEEEEEEEecCC--CCHHHHHHHHHHHHHHhc-----
Q 042825 406 MAIPIQVLRNATNNFSEE------NRLGRGGVGTVYKGELKDGTEVGVKRMELGS--VTEQGIAQFESEITVLTK----- 472 (631)
Q Consensus 406 ~~~~~~~l~~~t~~f~~~------~~iG~G~fg~Vyk~~~~~g~~vAvK~l~~~~--~~~~~~~~~~~Ei~~l~~----- 472 (631)
..|++.++.+++++|+.. +.||+|+||.||+|+. +++.||||++.... ......+.+.+|++++.+
T Consensus 13 ~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ 91 (307)
T 2nru_A 13 HSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHEN 91 (307)
T ss_dssp EECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCTT
T ss_pred CcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCCC
Confidence 468999999999999987 8999999999999987 58899999997532 123356789999998875
Q ss_pred -----------------------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------
Q 042825 473 -----------------------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------ 505 (631)
Q Consensus 473 -----------------------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------ 505 (631)
|+|.+++... .....++|..+..|+.+++.|
T Consensus 92 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nili~~~ 169 (307)
T 2nru_A 92 LVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCL--DGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLDEA 169 (307)
T ss_dssp BCCEEEEECSSSSCEEEEECCTTCBHHHHHHTG--GGCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTT
T ss_pred eEEEEEEEecCCceEEEEEecCCCcHHHHHHhc--cCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEcCC
Confidence 5666666432 223468999999999888866
Q ss_pred CCcEEEeeccccccCCCCccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHH-
Q 042825 506 DDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHL- 584 (631)
Q Consensus 506 ~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l- 584 (631)
+.+||+|||+++...............||+.|+|||.+.+ .++.++|||||||++|||++|+.||+....... ...+
T Consensus 170 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~-~~~~~ 247 (307)
T 2nru_A 170 FTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQL-LLDIK 247 (307)
T ss_dssp CCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSB-TTHHH
T ss_pred CcEEEeecccccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcchHH-HHHHH
Confidence 4688999999987643322223345679999999998754 589999999999999999999999986433210 0111
Q ss_pred ----------HHHhHhhhcC-----ChhHHHHHHhhcCCChhhHHhHHHHHHHHH
Q 042825 585 ----------ATWFQKMHKN-----HDTFQMAIDKTIQLDEENLANVSTVAELGD 624 (631)
Q Consensus 585 ----------~~~~~~~~~~-----~~~l~~~id~~L~~d~~~r~~~~~vl~lal 624 (631)
..+....... .+.+.+++..|+..+|.+||++.++++...
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~ 302 (307)
T 2nru_A 248 EEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQ 302 (307)
T ss_dssp HHHHTTSCCHHHHSCSSCSCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHH
T ss_pred HHhhhhhhhhhhhccccccccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHH
Confidence 1111111111 145789999999999999999999887543
|
| >3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=1e-23 Score=218.93 Aligned_cols=199 Identities=19% Similarity=0.275 Sum_probs=146.3
Q ss_pred cCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc-----------------------
Q 042825 417 TNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK----------------------- 472 (631)
Q Consensus 417 t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~----------------------- 472 (631)
.++|+..+.||+|+||+||+|+.. +++.||||++...... ...+.+.+|+.++..
T Consensus 6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~ 84 (323)
T 3tki_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV-DCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFL 84 (323)
T ss_dssp TTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC--------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEccccc-chHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEE
Confidence 468999999999999999999976 6899999999754322 234668889888875
Q ss_pred -----CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCC
Q 042825 473 -----GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENG 523 (631)
Q Consensus 473 -----gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~ 523 (631)
|+|.+++. ....+++.....++.+++.| +.+||+|||+++......
T Consensus 85 e~~~~~~L~~~l~-----~~~~~~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 159 (323)
T 3tki_A 85 EYCSGGELFDRIE-----PDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNN 159 (323)
T ss_dssp ECCTTEEGGGGSB-----TTTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECEETT
T ss_pred EcCCCCcHHHHHh-----hcCCCCHHHHHHHHHHHHHHHHHHHHCCccccccchHHEEEeCCCCEEEEEeeccceeccCC
Confidence 34444442 23458899999999888876 568999999998764333
Q ss_pred ccccccccccCcccccccccccCCC-CchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHh---HhhhcCChhHH
Q 042825 524 KHSILTKVAGTFGYLAPEYIVTGRI-TAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWF---QKMHKNHDTFQ 599 (631)
Q Consensus 524 ~~~~~~~~~gt~~Y~aPE~~~~~~~-~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~---~~~~~~~~~l~ 599 (631)
.........||+.|+|||++.+..+ +.++||||+||++|||++|+.||................. ......+.++.
T Consensus 160 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (323)
T 3tki_A 160 RERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPL 239 (323)
T ss_dssp EECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHHHHHHTTCTTSTTGGGSCHHHH
T ss_pred cccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhcccccCCccccCCHHHH
Confidence 3333456789999999999987775 7799999999999999999999986554322221111110 11122356889
Q ss_pred HHHHhhcCCChhhHHhHHHHHH
Q 042825 600 MAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 600 ~~id~~L~~d~~~r~~~~~vl~ 621 (631)
+++.++|..||.+|+++.++++
T Consensus 240 ~li~~~L~~dP~~R~t~~eil~ 261 (323)
T 3tki_A 240 ALLHKILVENPSARITIPDIKK 261 (323)
T ss_dssp HHHHHHSCSSTTTSCCHHHHTT
T ss_pred HHHHHHccCChhhCcCHHHHhh
Confidence 9999999999999999998865
|
| >3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=99.89 E-value=2e-23 Score=222.35 Aligned_cols=200 Identities=21% Similarity=0.296 Sum_probs=136.9
Q ss_pred hhcCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc---------------------
Q 042825 415 NATNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK--------------------- 472 (631)
Q Consensus 415 ~~t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~--------------------- 472 (631)
...++|+..+.||+|+||.||+|+.. +|+.||||++..........+++.+|+.++.+
T Consensus 6 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~ 85 (388)
T 3oz6_A 6 HVLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRD 85 (388)
T ss_dssp HHHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSC
T ss_pred cccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCE
Confidence 35678999999999999999999965 68999999997655555667788899988875
Q ss_pred ---------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeecccccc
Q 042825 473 ---------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLV 519 (631)
Q Consensus 473 ---------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~ 519 (631)
|+|.+++. . ..+++.+...++.+++.| +.+||+|||+|+..
T Consensus 86 ~~lv~e~~~~~L~~~~~----~--~~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~ 159 (388)
T 3oz6_A 86 VYLVFDYMETDLHAVIR----A--NILEPVHKQYVVYQLIKVIKYLHSGGLLHRDMKPSNILLNAECHVKVADFGLSRSF 159 (388)
T ss_dssp EEEEEECCSEEHHHHHH----H--TCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEES
T ss_pred EEEEecccCcCHHHHHH----c--CCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHeEEcCCCCEEecCCcccccc
Confidence 22222221 1 357888888888887766 56899999999875
Q ss_pred CCCC-------------------ccccccccccCccccccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChH
Q 042825 520 PENG-------------------KHSILTKVAGTFGYLAPEYIVT-GRITAKVDVYSFGMILMDLITGRKVVDATHSDPE 579 (631)
Q Consensus 520 ~~~~-------------------~~~~~~~~~gt~~Y~aPE~~~~-~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~ 579 (631)
.... .....+..+||+.|+|||++.+ ..++.++||||+||++|||++|+.||.+......
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~ 239 (388)
T 3oz6_A 160 VNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQ 239 (388)
T ss_dssp SSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH
T ss_pred cccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence 3210 1122345689999999999876 5799999999999999999999999986532211
Q ss_pred HHHHHHHHh------------------------------------------Hh------hhcCChhHHHHHHhhcCCChh
Q 042825 580 YIIHLATWF------------------------------------------QK------MHKNHDTFQMAIDKTIQLDEE 611 (631)
Q Consensus 580 ~~~~l~~~~------------------------------------------~~------~~~~~~~l~~~id~~L~~d~~ 611 (631)
...+.... .. ....++++.+++.+||..||.
T Consensus 240 -~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~~dP~ 318 (388)
T 3oz6_A 240 -LERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFNPN 318 (388)
T ss_dssp -HHHHHHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCCSSGG
T ss_pred -HHHHHHhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhccCcc
Confidence 11111100 00 002356789999999999999
Q ss_pred hHHhHHHHHH
Q 042825 612 NLANVSTVAE 621 (631)
Q Consensus 612 ~r~~~~~vl~ 621 (631)
+|+++.++++
T Consensus 319 ~R~t~~e~l~ 328 (388)
T 3oz6_A 319 KRISANDALK 328 (388)
T ss_dssp GSCCHHHHTT
T ss_pred cCCCHHHHhC
Confidence 9999998875
|
| >3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.89 E-value=3.8e-24 Score=224.93 Aligned_cols=193 Identities=19% Similarity=0.246 Sum_probs=137.7
Q ss_pred hcCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCC-CHHHHHHHHHHHHHHhc---------------------
Q 042825 416 ATNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSV-TEQGIAQFESEITVLTK--------------------- 472 (631)
Q Consensus 416 ~t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~-~~~~~~~~~~Ei~~l~~--------------------- 472 (631)
..++|+..+.||+|+||+||+|+.+ +|+.||||+++.... .....+.+.+|..++..
T Consensus 21 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~ 100 (353)
T 3txo_A 21 GIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLF 100 (353)
T ss_dssp --CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEE
T ss_pred chhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEE
Confidence 3468999999999999999999976 589999999975321 12234567788877753
Q ss_pred --------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccC
Q 042825 473 --------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVP 520 (631)
Q Consensus 473 --------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~ 520 (631)
|+|..++.. ...+++.....++.+++.| +.+||+|||+++...
T Consensus 101 lv~E~~~gg~L~~~l~~-----~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NILl~~~g~ikL~DFG~a~~~~ 175 (353)
T 3txo_A 101 FVMEFVNGGDLMFHIQK-----SRRFDEARARFYAAEIISALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGI 175 (353)
T ss_dssp EEEECCCSCBHHHHHHH-----HSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSC
T ss_pred EEEeCCCCCcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCHHHEEECCCCCEEEccccceeecc
Confidence 566666643 1357888887787777665 568999999998643
Q ss_pred CCCccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHH-hHhhhcCChhHH
Q 042825 521 ENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATW-FQKMHKNHDTFQ 599 (631)
Q Consensus 521 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~-~~~~~~~~~~l~ 599 (631)
.. .......+||+.|+|||++.+..|+.++||||+||++|||++|+.||.+....+ ....+... .......+.++.
T Consensus 176 ~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~-~~~~i~~~~~~~p~~~~~~~~ 252 (353)
T 3txo_A 176 CN--GVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDD-LFEAILNDEVVYPTWLHEDAT 252 (353)
T ss_dssp C-----------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHCCCCCCTTSCHHHH
T ss_pred cC--CccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHHH-HHHHHHcCCCCCCCCCCHHHH
Confidence 22 223456789999999999998889999999999999999999999998654321 11112111 111112357899
Q ss_pred HHHHhhcCCChhhHHhH
Q 042825 600 MAIDKTIQLDEENLANV 616 (631)
Q Consensus 600 ~~id~~L~~d~~~r~~~ 616 (631)
+++.++|..||.+|+++
T Consensus 253 ~li~~lL~~dP~~R~~~ 269 (353)
T 3txo_A 253 GILKSFMTKNPTMRLGS 269 (353)
T ss_dssp HHHHHHTCSSGGGSTTS
T ss_pred HHHHHHhhhCHHHccCC
Confidence 99999999999999987
|
| >4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=7e-24 Score=228.81 Aligned_cols=207 Identities=20% Similarity=0.246 Sum_probs=150.5
Q ss_pred CHHHHHhhcCCcccceeecCCCceEEEEEEecC-CcEEEEEEEecCCCCH-HHHHHHHHHHHHHhc--------------
Q 042825 409 PIQVLRNATNNFSEENRLGRGGVGTVYKGELKD-GTEVGVKRMELGSVTE-QGIAQFESEITVLTK-------------- 472 (631)
Q Consensus 409 ~~~~l~~~t~~f~~~~~iG~G~fg~Vyk~~~~~-g~~vAvK~l~~~~~~~-~~~~~~~~Ei~~l~~-------------- 472 (631)
.+.+++..+++|+..++||+|+||+||+|+.+. ++.||||++....... .....+.+|+.++.+
T Consensus 65 ~~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~ 144 (437)
T 4aw2_A 65 KVKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQ 144 (437)
T ss_dssp HHHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEE
T ss_pred hhhcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEe
Confidence 455666778999999999999999999999774 8899999997531110 112337788887764
Q ss_pred --------------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeec
Q 042825 473 --------------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFG 514 (631)
Q Consensus 473 --------------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFG 514 (631)
|+|.+++.. ....+++.....++.+++.| +.+||+|||
T Consensus 145 ~~~~~~lV~Ey~~gg~L~~~l~~----~~~~l~e~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILl~~~g~vkL~DFG 220 (437)
T 4aw2_A 145 DDNNLYLVMDYYVGGDLLTLLSK----FEDRLPEEMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFG 220 (437)
T ss_dssp CSSEEEEEECCCTTCBHHHHHHT----TTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCT
T ss_pred eCCEEEEEEecCCCCcHHHHHHH----ccCCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeeEcCCCCEEEcchh
Confidence 677777743 23457888888887777665 568999999
Q ss_pred cccccCCCCccccccccccCcccccccccc-----cCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHhH
Q 042825 515 LVRLVPENGKHSILTKVAGTFGYLAPEYIV-----TGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQ 589 (631)
Q Consensus 515 la~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-----~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~~ 589 (631)
+|+...... .......+||+.|+|||++. ...|+.++|||||||++|||++|+.||.+....+ ....+..+..
T Consensus 221 la~~~~~~~-~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~-~~~~i~~~~~ 298 (437)
T 4aw2_A 221 SCLKLMEDG-TVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVE-TYGKIMNHKE 298 (437)
T ss_dssp TCEECCTTS-CEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHH-HHHHHHTHHH
T ss_pred hhhhcccCC-CcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhH-HHHhhhhccc
Confidence 998764322 22334578999999999987 4579999999999999999999999998654322 2222322221
Q ss_pred h-h-----hcCChhHHHHHHhhcCCChhh--HHhHHHHHH
Q 042825 590 K-M-----HKNHDTFQMAIDKTIQLDEEN--LANVSTVAE 621 (631)
Q Consensus 590 ~-~-----~~~~~~l~~~id~~L~~d~~~--r~~~~~vl~ 621 (631)
. . ...++++.++|.++|..++.. |+++.++++
T Consensus 299 ~~~~p~~~~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~ 338 (437)
T 4aw2_A 299 RFQFPTQVTDVSENAKDLIRRLICSREHRLGQNGIEDFKK 338 (437)
T ss_dssp HCCCCSSCCCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHT
T ss_pred cccCCcccccCCHHHHHHHHHHhcccccccCCCCHHHHhC
Confidence 1 1 123578999999999877766 788887764
|
| >3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=6.2e-24 Score=219.28 Aligned_cols=208 Identities=18% Similarity=0.254 Sum_probs=148.8
Q ss_pred CHHHHHhhcCCcccceeecCCCceEEEEEEecCCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc----------------
Q 042825 409 PIQVLRNATNNFSEENRLGRGGVGTVYKGELKDGTEVGVKRMELGSVTEQGIAQFESEITVLTK---------------- 472 (631)
Q Consensus 409 ~~~~l~~~t~~f~~~~~iG~G~fg~Vyk~~~~~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~---------------- 472 (631)
.++.+....++|...+.||+|+||.||+++..+++.||||++..........+++.+|++++.+
T Consensus 19 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~ 98 (313)
T 3cek_A 19 YFQSMSVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEI 98 (313)
T ss_dssp -CCEEEETTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEE
T ss_pred CeeeeeeccceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEee
Confidence 3333444566799999999999999999998889999999998766666677889999988765
Q ss_pred -------------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC-----------------------CCcEEEeeccc
Q 042825 473 -------------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG-----------------------DDMRVADFGLV 516 (631)
Q Consensus 473 -------------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g-----------------------~~~kl~DFGla 516 (631)
++|.+++.. ...+++..+..++.++++| +.+||+|||++
T Consensus 99 ~~~~~~lv~e~~~~~L~~~l~~-----~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~~~~kL~Dfg~~ 173 (313)
T 3cek_A 99 TDQYIYMVMECGNIDLNSWLKK-----KKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGMLKLIDFGIA 173 (313)
T ss_dssp CSSEEEEEECCCSEEHHHHHHH-----CSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEETTEEEECCCSSS
T ss_pred cCCEEEEEEecCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEEECCeEEEeecccc
Confidence 344444432 2467888888888888876 45789999999
Q ss_pred cccCCCCccccccccccCccccccccccc-----------CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHH
Q 042825 517 RLVPENGKHSILTKVAGTFGYLAPEYIVT-----------GRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLA 585 (631)
Q Consensus 517 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-----------~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~ 585 (631)
+...............||+.|+|||++.+ ..++.++|||||||++|||++|+.||....... ..+.
T Consensus 174 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~---~~~~ 250 (313)
T 3cek_A 174 NQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQI---SKLH 250 (313)
T ss_dssp CC--------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSHH---HHHH
T ss_pred ccccCccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHHH---HHHH
Confidence 87643322222345679999999999865 468899999999999999999999998654321 1222
Q ss_pred HHhHhh------hcCChhHHHHHHhhcCCChhhHHhHHHHHHHHH
Q 042825 586 TWFQKM------HKNHDTFQMAIDKTIQLDEENLANVSTVAELGD 624 (631)
Q Consensus 586 ~~~~~~------~~~~~~l~~~id~~L~~d~~~r~~~~~vl~lal 624 (631)
...... ...+.++.+++.+|+..||.+|+++.++++--.
T Consensus 251 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h~~ 295 (313)
T 3cek_A 251 AIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPY 295 (313)
T ss_dssp HHHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHH
T ss_pred HHHhcccccCCcccchHHHHHHHHHHccCCcccCcCHHHHhcCcc
Confidence 222111 111467999999999999999999999886443
|
| >3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ... | Back alignment and structure |
|---|
Probab=99.89 E-value=3.4e-23 Score=211.26 Aligned_cols=204 Identities=23% Similarity=0.398 Sum_probs=140.2
Q ss_pred hcCCcccceeecCCCceEEEEEEecCCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc-----------------------
Q 042825 416 ATNNFSEENRLGRGGVGTVYKGELKDGTEVGVKRMELGSVTEQGIAQFESEITVLTK----------------------- 472 (631)
Q Consensus 416 ~t~~f~~~~~iG~G~fg~Vyk~~~~~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~----------------------- 472 (631)
..++|...+.||+|+||+||+|+.. ..||||+++.........+.|.+|++++.+
T Consensus 22 ~~~~y~~~~~lG~G~~g~Vy~~~~~--~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~lv~e 99 (289)
T 3og7_A 22 PDGQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTAPQLAIVTQ 99 (289)
T ss_dssp CTTSCEEEEEEEECSSEEEEEEESS--SEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSCEEEEE
T ss_pred CccceeeeeEecCCCCeEEEEEEEc--CceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeeccCCccEEEEE
Confidence 3457899999999999999999864 359999998766666777889999999986
Q ss_pred ----CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCCc
Q 042825 473 ----GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENGK 524 (631)
Q Consensus 473 ----gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~~ 524 (631)
++|.+++. .....+++.....++.+++.| +.+||+|||+++.......
T Consensus 100 ~~~~~~L~~~l~----~~~~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 175 (289)
T 3og7_A 100 WCEGSSLYHHLH----ASETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSG 175 (289)
T ss_dssp CCCEEEHHHHHT----TC---CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTTEEEECCCC----------
T ss_pred ecCCCcHHHHHh----hccCCCCHHHHHHHHHHHHHHHHHHHhCCcccccCccceEEECCCCCEEEccceeccccccccc
Confidence 44444442 233568888888888888766 4578999999986642222
Q ss_pred cccccccccCcccccccccc---cCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHhH-h-----hhcCC
Q 042825 525 HSILTKVAGTFGYLAPEYIV---TGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQ-K-----MHKNH 595 (631)
Q Consensus 525 ~~~~~~~~gt~~Y~aPE~~~---~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~~-~-----~~~~~ 595 (631)
........||+.|+|||.+. ...++.++|||||||++|||++|+.||............+..... . ....+
T Consensus 176 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (289)
T 3og7_A 176 SHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNCP 255 (289)
T ss_dssp --------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHHHHHHHHHHTSCCCCTTSSCTTSC
T ss_pred cccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHHHHHHHhcccccCcchhhccccCC
Confidence 23344567999999999986 566899999999999999999999999865443211111111000 0 01224
Q ss_pred hhHHHHHHhhcCCChhhHHhHHHHHHHHHh
Q 042825 596 DTFQMAIDKTIQLDEENLANVSTVAELGDH 625 (631)
Q Consensus 596 ~~l~~~id~~L~~d~~~r~~~~~vl~lal~ 625 (631)
+++.+++.+|+..+|.+|+++.++++..-.
T Consensus 256 ~~l~~li~~~l~~~p~~Rps~~ell~~L~~ 285 (289)
T 3og7_A 256 KRMKRLMAECLKKKRDERPSFPRILAEIEE 285 (289)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred HHHHHHHHHHccCChhhCCCHHHHHHHHHH
Confidence 679999999999999999999999876543
|
| >2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=3.6e-23 Score=218.04 Aligned_cols=197 Identities=18% Similarity=0.267 Sum_probs=150.1
Q ss_pred hcCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCH----HHHHHHHHHHHHHhc------------------
Q 042825 416 ATNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTE----QGIAQFESEITVLTK------------------ 472 (631)
Q Consensus 416 ~t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~----~~~~~~~~Ei~~l~~------------------ 472 (631)
..+.|...+.||+|+||.||+|+.+ +|+.||||++....... ...+.+.+|+.++.+
T Consensus 10 ~~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~ 89 (361)
T 2yab_A 10 VEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTD 89 (361)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSE
T ss_pred hhhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCE
Confidence 4567999999999999999999976 58999999998654321 135678999999876
Q ss_pred ----------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------C----CcEEEeec
Q 042825 473 ----------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------D----DMRVADFG 514 (631)
Q Consensus 473 ----------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~----~~kl~DFG 514 (631)
|+|.+++. ....+++.....++.+++.| + .+||+|||
T Consensus 90 ~~lv~e~~~gg~L~~~l~-----~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~~~~vkl~DFG 164 (361)
T 2yab_A 90 VVLILELVSGGELFDFLA-----QKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFG 164 (361)
T ss_dssp EEEEEECCCSCBHHHHHT-----TCSCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTTSSSCCEEECCCS
T ss_pred EEEEEEcCCCCcHHHHHH-----hcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEeCCCCCccCEEEEecC
Confidence 56666653 23468888888888887765 2 58999999
Q ss_pred cccccCCCCccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHH----hHh
Q 042825 515 LVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATW----FQK 590 (631)
Q Consensus 515 la~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~----~~~ 590 (631)
+++..... ......+||+.|+|||++.+..++.++||||+||++|||++|+.||.+....+ ....+... ...
T Consensus 165 ~a~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~~-~~~~i~~~~~~~~~~ 240 (361)
T 2yab_A 165 LAHEIEDG---VEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE-TLANITAVSYDFDEE 240 (361)
T ss_dssp SCEECCTT---CCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHH-HHHHHHTTCCCCCHH
T ss_pred CceEcCCC---CccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHhcCCCCCch
Confidence 99876432 12345679999999999998899999999999999999999999998653221 11111110 001
Q ss_pred -hhcCChhHHHHHHhhcCCChhhHHhHHHHHH
Q 042825 591 -MHKNHDTFQMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 591 -~~~~~~~l~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
....++++.++|.++|..||.+|+++.++++
T Consensus 241 ~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~ 272 (361)
T 2yab_A 241 FFSQTSELAKDFIRKLLVKETRKRLTIQEALR 272 (361)
T ss_dssp HHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred hccCCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 1123567899999999999999999998875
|
| >4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=99.89 E-value=3.6e-23 Score=211.84 Aligned_cols=204 Identities=21% Similarity=0.349 Sum_probs=145.6
Q ss_pred cCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCC-CHHHHHHHHHHHHHHhc----------------------
Q 042825 417 TNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSV-TEQGIAQFESEITVLTK---------------------- 472 (631)
Q Consensus 417 t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~-~~~~~~~~~~Ei~~l~~---------------------- 472 (631)
.++|...+.||+|+||.||+|+.. +++.||+|++..... .....++|.+|+.++.+
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 89 (294)
T 4eqm_A 10 NERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLV 89 (294)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEE
T ss_pred hccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEE
Confidence 467999999999999999999965 589999999865432 34456789999999876
Q ss_pred ------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCC
Q 042825 473 ------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPEN 522 (631)
Q Consensus 473 ------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~ 522 (631)
++|.+++.. ...+++.....++.+++.+ +.+||+|||+++.....
T Consensus 90 ~e~~~g~~L~~~l~~-----~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 164 (294)
T 4eqm_A 90 MEYIEGPTLSEYIES-----HGPLSVDTAINFTNQILDGIKHAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSET 164 (294)
T ss_dssp EECCCSCBHHHHHHH-----HCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCSSSTTC---
T ss_pred EeCCCCCCHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEEeCCCccccccc
Confidence 567766643 1358888888888887765 56899999999876422
Q ss_pred CccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHhH----h-hhcCChh
Q 042825 523 GKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQ----K-MHKNHDT 597 (631)
Q Consensus 523 ~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~~----~-~~~~~~~ 597 (631)
.........||+.|+|||.+.+..++.++||||+||++|||+||+.||.+..........+..... . ....++.
T Consensus 165 -~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (294)
T 4eqm_A 165 -SLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKHIQDSVPNVTTDVRKDIPQS 243 (294)
T ss_dssp -----------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHHHHHHHSSCCCCHHHHSCTTSCHH
T ss_pred -cccccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhhccCCCcchhcccCCCHH
Confidence 112234567999999999999999999999999999999999999999865432111111111100 0 1123467
Q ss_pred HHHHHHhhcCCChhhHH-hHHHHHHHHHhh
Q 042825 598 FQMAIDKTIQLDEENLA-NVSTVAELGDHC 626 (631)
Q Consensus 598 l~~~id~~L~~d~~~r~-~~~~vl~lal~C 626 (631)
+.+++.+++..||.+|+ ++.++.+.-..+
T Consensus 244 l~~li~~~l~~dp~~R~~~~~~l~~~l~~~ 273 (294)
T 4eqm_A 244 LSNVILRATEKDKANRYKTIQEMKDDLSSV 273 (294)
T ss_dssp HHHHHHHHSCSSGGGSCSSHHHHHHHHHTS
T ss_pred HHHHHHHHhcCCHhHccccHHHHHHHHHHH
Confidence 99999999999999998 666666544433
|
| >1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=7.3e-23 Score=210.87 Aligned_cols=211 Identities=20% Similarity=0.294 Sum_probs=156.4
Q ss_pred hcCCcccceeecCCCceEEEEEEe------cCCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc-----------------
Q 042825 416 ATNNFSEENRLGRGGVGTVYKGEL------KDGTEVGVKRMELGSVTEQGIAQFESEITVLTK----------------- 472 (631)
Q Consensus 416 ~t~~f~~~~~iG~G~fg~Vyk~~~------~~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~----------------- 472 (631)
..++|...+.||+|+||.||+|+. .+++.||||++.... .....+.+.+|++++.+
T Consensus 21 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~ 99 (313)
T 1t46_A 21 PRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSA-HLTEREALMSELKVLSYLGNHMNIVNLLGACTIG 99 (313)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC-CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred ChhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcch-hHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecC
Confidence 346788999999999999999985 247899999997653 33456789999988764
Q ss_pred ------------CChhHHhHhhhh-------------cCCCCCCHHHHHHHHHHhhcC----------------------
Q 042825 473 ------------GTLGRHLFNWEE-------------EGLEPLEWNTRLNIALDVARG---------------------- 505 (631)
Q Consensus 473 ------------gsL~~~L~~~~~-------------~~~~~L~~~~~~~I~~~ia~g---------------------- 505 (631)
|+|.+++..... .....+++.....++.+++.|
T Consensus 100 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~ 179 (313)
T 1t46_A 100 GPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLT 179 (313)
T ss_dssp SSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEE
T ss_pred CCcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEc
Confidence 477777654211 112358999999999888876
Q ss_pred --CCcEEEeeccccccCCCCccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChHHHH
Q 042825 506 --DDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT-GRKVVDATHSDPEYII 582 (631)
Q Consensus 506 --~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~Ellt-G~~P~~~~~~~~~~~~ 582 (631)
+.+||+|||+++...............||+.|+|||++.+..++.++|||||||++|||+| |+.||...........
T Consensus 180 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~ 259 (313)
T 1t46_A 180 HGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYK 259 (313)
T ss_dssp TTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHHHHH
T ss_pred CCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccchhHHHH
Confidence 4568999999987753333223344568889999999998999999999999999999999 9999987655433222
Q ss_pred HHHHHhHhh--hcCChhHHHHHHhhcCCChhhHHhHHHHHHHHHhhh
Q 042825 583 HLATWFQKM--HKNHDTFQMAIDKTIQLDEENLANVSTVAELGDHCC 627 (631)
Q Consensus 583 ~l~~~~~~~--~~~~~~l~~~id~~L~~d~~~r~~~~~vl~lal~C~ 627 (631)
.+....... ...+.++.+++.+|+..||.+|+++.++++......
T Consensus 260 ~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~ 306 (313)
T 1t46_A 260 MIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQI 306 (313)
T ss_dssp HHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HhccCCCCCCcccCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHH
Confidence 222211111 123468999999999999999999999988655443
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=3.2e-24 Score=248.63 Aligned_cols=236 Identities=21% Similarity=0.297 Sum_probs=151.2
Q ss_pred CCCCCc-eecccceeehhhhcc----ccchhhhhhhhhhhccccccccccCCCCCCCChhhHHHHHHHHHhCCCCCCCCC
Q 042825 6 WHPSNF-QLFGFPRLTFRDCMT----ATSELEREKTERVQGDRRKKRRKIPSASSNQSRPDAAVMQDLKASFVIPKRLKW 80 (631)
Q Consensus 6 ~~~~~~-~~~~~~~~~~~~~~~----~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~k~~~~~~~~~~w 80 (631)
.+|+.| ++.+++.|.+.++.. +.....+++|+.|++.+|.+++.+|.........+. +.... .. .
T Consensus 409 ~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~-----L~L~~---N~--l 478 (768)
T 3rgz_A 409 KIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLET-----LILDF---ND--L 478 (768)
T ss_dssp ECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCE-----EECCS---SC--C
T ss_pred ccCHHHhcCCCCCEEECcCCcccCcccHHHhcCCCCCEEECCCCcccCcCCHHHcCCCCceE-----EEecC---Cc--c
Confidence 356667 677777877777642 223345678888888888888877766544322111 00000 00 0
Q ss_pred CCCCCCCccceeeCCCCCeEEEEeCCCCCcccCcchhcCCccCceeecccCcccCCCCcCcc---cccccccccccce--
Q 042825 81 SDPDPCQWSHVICSDDGQVTNIELQDQNRKGTVPPILKKLSSMAVMYLENNQLRGPIPSLVG---SLEFFSAYEANIS-- 155 (631)
Q Consensus 81 ~~~~~C~w~gv~C~~~~~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~L~~N~l~g~lP~~~~---~L~~L~l~~n~l~-- 155 (631)
.+..|-.+. ...+++.|+|++|.++|.+|..++++++|++|+|++|+++|.+|..++ +|+.|++++|+++
T Consensus 479 ~~~~p~~l~-----~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ 553 (768)
T 3rgz_A 479 TGEIPSGLS-----NCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGT 553 (768)
T ss_dssp CSCCCGGGG-----GCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEEECCGGGGGCTTCCEEECCSSEEESB
T ss_pred cCcCCHHHh-----cCCCCCEEEccCCccCCcCChHHhcCCCCCEEECCCCcccCcCCHHHcCCCCCCEEECCCCccCCc
Confidence 000010000 112344455555555555555555555555555555555544444433 3444444444444
Q ss_pred --------------------------------------------------------------------ecCCCCCCcCCC
Q 042825 156 --------------------------------------------------------------------GTIPDFIGTDTF 167 (631)
Q Consensus 156 --------------------------------------------------------------------g~ip~~~~~~~l 167 (631)
|.+|..++ .+
T Consensus 554 ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~--~l 631 (768)
T 3rgz_A 554 IPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFD--NN 631 (768)
T ss_dssp CCGGGGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCS--SS
T ss_pred CChHHhcccchhhhhccccccccccccccccccccccccccccccccchhhhccccccccccccceecccCchhhh--cc
Confidence 44555555 57
Q ss_pred CCCcEEEccCCcccccCCCCCCCCccCcCCCCCCCEEEeecCcCcccCChhhccCCCCCCEEEccCCCCcccCCCCCC-C
Q 042825 168 PQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNNLLQGPTPRFNN-S 246 (631)
Q Consensus 168 ~~L~~L~Ls~N~l~g~iP~~~~~~~~~~~~l~~L~~L~L~~N~l~g~iP~~~~~~l~~L~~L~ls~N~l~g~~p~~~~-~ 246 (631)
++|+.|||++|+|+|.+|..+ +++++|+.|+|++|+|+|.||.. ++.+++|+.|||++|+|+|.+|.... .
T Consensus 632 ~~L~~LdLs~N~l~g~ip~~l-------~~l~~L~~L~Ls~N~l~g~ip~~-l~~L~~L~~LdLs~N~l~g~ip~~l~~l 703 (768)
T 3rgz_A 632 GSMMFLDMSYNMLSGYIPKEI-------GSMPYLFILNLGHNDISGSIPDE-VGDLRGLNILDLSSNKLDGRIPQAMSAL 703 (768)
T ss_dssp BCCCEEECCSSCCBSCCCGGG-------GGCTTCCEEECCSSCCCSCCCGG-GGGCTTCCEEECCSSCCEECCCGGGGGC
T ss_pred ccccEEECcCCcccccCCHHH-------hccccCCEEeCcCCccCCCCChH-HhCCCCCCEEECCCCcccCcCChHHhCC
Confidence 889999999999999999775 48999999999999999999976 99999999999999999999997543 3
Q ss_pred CceEEeecCCCcccCCCCCC
Q 042825 247 KLTVDMRTGSNCFCLDDPGL 266 (631)
Q Consensus 247 ~~~~~l~~~~n~~~~~~~~~ 266 (631)
.....+++++|+++|.+|..
T Consensus 704 ~~L~~L~ls~N~l~g~iP~~ 723 (768)
T 3rgz_A 704 TMLTEIDLSNNNLSGPIPEM 723 (768)
T ss_dssp CCCSEEECCSSEEEEECCSS
T ss_pred CCCCEEECcCCcccccCCCc
Confidence 44556788999999998864
|
| >3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.89 E-value=3.2e-23 Score=214.83 Aligned_cols=211 Identities=20% Similarity=0.260 Sum_probs=139.6
Q ss_pred hhcCCcccceeecCCCceEEEEEEecC-C---cEEEEEEEecCCCCHHHHHHHHHHHHHHhc------------------
Q 042825 415 NATNNFSEENRLGRGGVGTVYKGELKD-G---TEVGVKRMELGSVTEQGIAQFESEITVLTK------------------ 472 (631)
Q Consensus 415 ~~t~~f~~~~~iG~G~fg~Vyk~~~~~-g---~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~------------------ 472 (631)
...++|...+.||+|+||.||+|+... + ..||||++..........+++.+|++++.+
T Consensus 20 i~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 99 (323)
T 3qup_A 20 IPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRA 99 (323)
T ss_dssp CC---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC--
T ss_pred cChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeecccc
Confidence 345689999999999999999998654 3 279999997665455567889999999876
Q ss_pred ----------------CChhHHhHhhhh-cCCCCCCHHHHHHHHHHhhcC------------------------CCcEEE
Q 042825 473 ----------------GTLGRHLFNWEE-EGLEPLEWNTRLNIALDVARG------------------------DDMRVA 511 (631)
Q Consensus 473 ----------------gsL~~~L~~~~~-~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~ 511 (631)
|+|.+++..... .....+++.....|+.+++.| +.+||+
T Consensus 100 ~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivH~Dikp~NIli~~~~~~kl~ 179 (323)
T 3qup_A 100 KGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRNFIHRDLAARNCMLAEDMTVCVA 179 (323)
T ss_dssp -----CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTSCEEEC
T ss_pred ccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcCCcccCCCCcceEEEcCCCCEEEe
Confidence 355555543211 112358899999999888876 468999
Q ss_pred eeccccccCCCCccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChHHHHHHHHH--h
Q 042825 512 DFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT-GRKVVDATHSDPEYIIHLATW--F 588 (631)
Q Consensus 512 DFGla~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~Ellt-G~~P~~~~~~~~~~~~~l~~~--~ 588 (631)
|||+++...............+|+.|+|||.+.+..++.++|||||||++|||++ |+.||.+........ .+... .
T Consensus 180 Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~-~~~~~~~~ 258 (323)
T 3qup_A 180 DFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYN-YLIGGNRL 258 (323)
T ss_dssp CCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHH-HHHTTCCC
T ss_pred eccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChHHHHH-HHhcCCCC
Confidence 9999987643322223334567889999999999999999999999999999999 999998654432111 11110 0
Q ss_pred HhhhcCChhHHHHHHhhcCCChhhHHhHHHHHHHHHhh
Q 042825 589 QKMHKNHDTFQMAIDKTIQLDEENLANVSTVAELGDHC 626 (631)
Q Consensus 589 ~~~~~~~~~l~~~id~~L~~d~~~r~~~~~vl~lal~C 626 (631)
......++++.+++.+|+..||.+|+++.++++..-..
T Consensus 259 ~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~ 296 (323)
T 3qup_A 259 KQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENI 296 (323)
T ss_dssp CCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHH
T ss_pred CCCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 11122346899999999999999999998887765543
|
| >2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=1.1e-23 Score=221.42 Aligned_cols=198 Identities=20% Similarity=0.277 Sum_probs=144.8
Q ss_pred hcCCcccceeecCCCceEEEEEEecC-CcEEEEEEEecCCC-CHHHHHHHHHHHHHHhc---------------------
Q 042825 416 ATNNFSEENRLGRGGVGTVYKGELKD-GTEVGVKRMELGSV-TEQGIAQFESEITVLTK--------------------- 472 (631)
Q Consensus 416 ~t~~f~~~~~iG~G~fg~Vyk~~~~~-g~~vAvK~l~~~~~-~~~~~~~~~~Ei~~l~~--------------------- 472 (631)
..++|+..+.||+|+||+||+|+.+. |+.||||++..... .....+.+.+|..++..
T Consensus 18 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~ 97 (353)
T 2i0e_A 18 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY 97 (353)
T ss_dssp -CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEE
T ss_pred chHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEE
Confidence 35689999999999999999999764 88999999975321 11234567888888754
Q ss_pred --------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccC
Q 042825 473 --------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVP 520 (631)
Q Consensus 473 --------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~ 520 (631)
|+|.+++.. ...+++.....++.+++.| +.+||+|||+++...
T Consensus 98 lv~E~~~gg~L~~~l~~-----~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~ 172 (353)
T 2i0e_A 98 FVMEYVNGGDLMYHIQQ-----VGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENI 172 (353)
T ss_dssp EEEECCCSCBHHHHHHH-----HSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCC
T ss_pred EEEeCCCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEEcCCCcEEEEeCCcccccc
Confidence 567666643 1357888888888777765 568999999998643
Q ss_pred CCCccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHH-hHhhhcCChhHH
Q 042825 521 ENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATW-FQKMHKNHDTFQ 599 (631)
Q Consensus 521 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~-~~~~~~~~~~l~ 599 (631)
... ......+||+.|+|||++.+..++.++||||+||++|||++|+.||.+....+ ....+... .......+.++.
T Consensus 173 ~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~-~~~~i~~~~~~~p~~~s~~~~ 249 (353)
T 2i0e_A 173 WDG--VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDE-LFQSIMEHNVAYPKSMSKEAV 249 (353)
T ss_dssp CTT--CCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHCCCCCCTTSCHHHH
T ss_pred cCC--cccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCHHH-HHHHHHhCCCCCCCCCCHHHH
Confidence 221 23456789999999999999999999999999999999999999998653221 11111111 111112357899
Q ss_pred HHHHhhcCCChhhHHh-----HHHHHH
Q 042825 600 MAIDKTIQLDEENLAN-----VSTVAE 621 (631)
Q Consensus 600 ~~id~~L~~d~~~r~~-----~~~vl~ 621 (631)
+++.++|..||.+|++ +.++++
T Consensus 250 ~li~~lL~~dP~~R~~~~~~~~~~i~~ 276 (353)
T 2i0e_A 250 AICKGLMTKHPGKRLGCGPEGERDIKE 276 (353)
T ss_dssp HHHHHHTCSCTTSCTTCSTTHHHHHHT
T ss_pred HHHHHHhhcCHHHcCCCCCCCHHHHhc
Confidence 9999999999999984 555543
|
| >3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.89 E-value=3.8e-23 Score=212.87 Aligned_cols=199 Identities=20% Similarity=0.255 Sum_probs=141.9
Q ss_pred hcCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCC---HHHHHHHHHHHHHHhc-------------------
Q 042825 416 ATNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVT---EQGIAQFESEITVLTK------------------- 472 (631)
Q Consensus 416 ~t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~---~~~~~~~~~Ei~~l~~------------------- 472 (631)
.+++|+..+.||+|+||+||+|+.. +|+.||||++...... ......+.+|++++.+
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~ 86 (308)
T 3g33_A 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATS 86 (308)
T ss_dssp ---CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEEC
T ss_pred cccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeecc
Confidence 4678999999999999999999964 6899999999743211 1112345556555432
Q ss_pred ----------------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEe
Q 042825 473 ----------------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVAD 512 (631)
Q Consensus 473 ----------------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~D 512 (631)
|+|.+++.. .....+++.....|+.+++.| +.+||+|
T Consensus 87 ~~~~~~~~~lv~e~~~~~L~~~~~~---~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~~~~~~kl~D 163 (308)
T 3g33_A 87 RTDREIKVTLVFEHVDQDLRTYLDK---APPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLAD 163 (308)
T ss_dssp CSSSEEEEEEEEECCCCBHHHHHHT---CCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCTTTEEECTTSCEEECS
T ss_pred CCCCceeEEEEehhhhcCHHHHHhh---ccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCEEEee
Confidence 444444432 222348999999999888776 4678999
Q ss_pred eccccccCCCCccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHhH---
Q 042825 513 FGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQ--- 589 (631)
Q Consensus 513 FGla~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~~--- 589 (631)
||+++..... .......||+.|+|||++.+..++.++||||+||++|||++|+.||.+..... ....+.....
T Consensus 164 fg~a~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~-~~~~i~~~~~~~~ 239 (308)
T 3g33_A 164 FGLARIYSYQ---MALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEAD-QLGKIFDLIGLPP 239 (308)
T ss_dssp CSCTTTSTTC---CCSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHH-HHHHHHHHHCCCC
T ss_pred CccccccCCC---cccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHhCCCC
Confidence 9999876422 22345679999999999999999999999999999999999999998654321 1111211100
Q ss_pred -------------------------hhhcCChhHHHHHHhhcCCChhhHHhHHHHHH
Q 042825 590 -------------------------KMHKNHDTFQMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 590 -------------------------~~~~~~~~l~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
.....++.+.+++.+||..||.+|+++.++++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 296 (308)
T 3g33_A 240 EDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQ 296 (308)
T ss_dssp TTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred hhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhc
Confidence 00123467899999999999999999998875
|
| >3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.89 E-value=5.8e-23 Score=213.44 Aligned_cols=205 Identities=20% Similarity=0.284 Sum_probs=150.2
Q ss_pred cCCcccceeecCCCceEEEEEEec----CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc--------------------
Q 042825 417 TNNFSEENRLGRGGVGTVYKGELK----DGTEVGVKRMELGSVTEQGIAQFESEITVLTK-------------------- 472 (631)
Q Consensus 417 t~~f~~~~~iG~G~fg~Vyk~~~~----~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~-------------------- 472 (631)
.++|...+.||+|+||+||+|+.. .+..||||++.... .....++|.+|++++.+
T Consensus 48 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 126 (325)
T 3kul_A 48 ASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGY-TERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAM 126 (325)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTC-CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCE
T ss_pred hhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCC-CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccE
Confidence 356888999999999999999975 35579999997643 45566789999999876
Q ss_pred --------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccC
Q 042825 473 --------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVP 520 (631)
Q Consensus 473 --------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~ 520 (631)
|+|.+++.. ....+++..+..|+.+++.| +.+||+|||+++...
T Consensus 127 lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 202 (325)
T 3kul_A 127 IVTEYMENGSLDTFLRT----HDGQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLE 202 (325)
T ss_dssp EEEECCTTCBHHHHHHT----TTTCSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCSSCEECC
T ss_pred EEeeCCCCCcHHHHHHh----cccCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEECCCCCEEECCCCcccccc
Confidence 566666642 23468999999999888876 467899999998774
Q ss_pred CCCcc-ccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChHHHHHHHHHhH--hhhcCCh
Q 042825 521 ENGKH-SILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT-GRKVVDATHSDPEYIIHLATWFQ--KMHKNHD 596 (631)
Q Consensus 521 ~~~~~-~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~Ellt-G~~P~~~~~~~~~~~~~l~~~~~--~~~~~~~ 596 (631)
..... .......+|+.|+|||++.+..++.++|||||||++|||++ |+.||....... ....+..... .....++
T Consensus 203 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 281 (325)
T 3kul_A 203 DDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRD-VISSVEEGYRLPAPMGCPH 281 (325)
T ss_dssp ----CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHHH-HHHHHHTTCCCCCCTTCCH
T ss_pred cCccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHHH-HHHHHHcCCCCCCCCCcCH
Confidence 32211 12233456889999999998899999999999999999999 999997643221 1111111100 1112346
Q ss_pred hHHHHHHhhcCCChhhHHhHHHHHHHHHhhh
Q 042825 597 TFQMAIDKTIQLDEENLANVSTVAELGDHCC 627 (631)
Q Consensus 597 ~l~~~id~~L~~d~~~r~~~~~vl~lal~C~ 627 (631)
++.+++..|+..||.+|+++.++++..-...
T Consensus 282 ~l~~li~~~l~~dp~~Rps~~eil~~L~~l~ 312 (325)
T 3kul_A 282 ALHQLMLDCWHKDRAQRPRFSQIVSVLDALI 312 (325)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 8999999999999999999999988655443
|
| >4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=3.7e-23 Score=208.59 Aligned_cols=198 Identities=21% Similarity=0.325 Sum_probs=149.3
Q ss_pred CCcccceeecCCCceEEEEEEecCCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc-------------------------
Q 042825 418 NNFSEENRLGRGGVGTVYKGELKDGTEVGVKRMELGSVTEQGIAQFESEITVLTK------------------------- 472 (631)
Q Consensus 418 ~~f~~~~~iG~G~fg~Vyk~~~~~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~------------------------- 472 (631)
++|...+.||+|+||.||+|+..+++.||||++...... .+++.+|++++.+
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~---~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 86 (269)
T 4hcu_A 10 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMS---EEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEF 86 (269)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTSBC---HHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEEC
T ss_pred hhceeeheecCCCccEEEEEEecCCCeEEEEEecccccC---HHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEe
Confidence 578889999999999999999988999999999865433 3678999999876
Q ss_pred ---CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCCcc
Q 042825 473 ---GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENGKH 525 (631)
Q Consensus 473 ---gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~~~ 525 (631)
++|.+++. .....+++.....++.+++.+ +.+||+|||+++.... ...
T Consensus 87 ~~~~~L~~~l~----~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~-~~~ 161 (269)
T 4hcu_A 87 MEHGCLSDYLR----TQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLD-DQY 161 (269)
T ss_dssp CTTCBHHHHHH----TTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECGGGCEEECCTTGGGGBCC-HHH
T ss_pred CCCCcHHHHHH----hcCcccCHHHHHHHHHHHHHHHHHHHhCCeecCCcchheEEEcCCCCEEeccccccccccc-ccc
Confidence 45666653 233458888888888888765 4578999999987642 112
Q ss_pred ccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChHHHHHHHHHhHhh--hcCChhHHHHH
Q 042825 526 SILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT-GRKVVDATHSDPEYIIHLATWFQKM--HKNHDTFQMAI 602 (631)
Q Consensus 526 ~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~Ellt-G~~P~~~~~~~~~~~~~l~~~~~~~--~~~~~~l~~~i 602 (631)
.......+|+.|+|||.+.+..++.++||||+|+++|||++ |+.||....... ....+....... ...++++.+++
T Consensus 162 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~li 240 (269)
T 4hcu_A 162 TSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE-VVEDISTGFRLYKPRLASTHVYQIM 240 (269)
T ss_dssp HSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH-HHHHHHTTCCCCCCTTSCHHHHHHH
T ss_pred ccccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHHH-HHHHHhcCccCCCCCcCCHHHHHHH
Confidence 22344567889999999998999999999999999999999 999998643221 111111110111 11246899999
Q ss_pred HhhcCCChhhHHhHHHHHHHHH
Q 042825 603 DKTIQLDEENLANVSTVAELGD 624 (631)
Q Consensus 603 d~~L~~d~~~r~~~~~vl~lal 624 (631)
.+|+..+|.+|+++.++++...
T Consensus 241 ~~~l~~~p~~Rps~~~ll~~l~ 262 (269)
T 4hcu_A 241 NHCWRERPEDRPAFSRLLRQLA 262 (269)
T ss_dssp HHHTCSSGGGSCCHHHHHHHHH
T ss_pred HHHccCCcccCcCHHHHHHHHH
Confidence 9999999999999999887543
|
| >1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B | Back alignment and structure |
|---|
Probab=99.89 E-value=2.4e-23 Score=226.56 Aligned_cols=202 Identities=24% Similarity=0.340 Sum_probs=152.9
Q ss_pred HhhcCCcccceeecCCCceEEEEEEecCCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc---------------------
Q 042825 414 RNATNNFSEENRLGRGGVGTVYKGELKDGTEVGVKRMELGSVTEQGIAQFESEITVLTK--------------------- 472 (631)
Q Consensus 414 ~~~t~~f~~~~~iG~G~fg~Vyk~~~~~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~--------------------- 472 (631)
+...++|...+.||+|+||+||+|+++++..||||+++.... ..++|.+|+++|.+
T Consensus 184 ~i~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~lv 260 (454)
T 1qcf_A 184 EIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSM---SVEAFLAEANVMKTLQHDKLVKLHAVVTKEPIYII 260 (454)
T ss_dssp BCCGGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTSB---CHHHHHHHHHHHTTCCCTTBCCEEEEECSSSCEEE
T ss_pred eechHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCCc---cHHHHHHHHHHHhhCCCCCEeeEEEEEeCCccEEE
Confidence 345678899999999999999999998889999999986542 35789999999876
Q ss_pred ------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCC
Q 042825 473 ------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPEN 522 (631)
Q Consensus 473 ------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~ 522 (631)
|+|.+++.... ...+++.....++.+++.| +.+||+|||+++....
T Consensus 261 ~e~~~~g~L~~~l~~~~---~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~- 336 (454)
T 1qcf_A 261 TEFMAKGSLLDFLKSDE---GSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIED- 336 (454)
T ss_dssp ECCCTTCBHHHHHHSHH---HHTCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEECTTCCEEECSTTGGGGBCC-
T ss_pred EeecCCCcHHHHHHhcc---CCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHEEECCCCcEEEeeCCCceEcCC-
Confidence 67777775321 1357888888888888876 4679999999987642
Q ss_pred CccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChHHHHHHHHHhHh--hhcCChhHH
Q 042825 523 GKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT-GRKVVDATHSDPEYIIHLATWFQK--MHKNHDTFQ 599 (631)
Q Consensus 523 ~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~Ellt-G~~P~~~~~~~~~~~~~l~~~~~~--~~~~~~~l~ 599 (631)
..........+|+.|+|||++....++.++|||||||++|||+| |+.||.+....+ ....+..-.+. ....++++.
T Consensus 337 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~~-~~~~i~~~~~~~~~~~~~~~l~ 415 (454)
T 1qcf_A 337 NEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPE-VIRALERGYRMPRPENCPEELY 415 (454)
T ss_dssp HHHHTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHH-HHHHHHHTCCCCCCTTSCHHHH
T ss_pred CceeccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHHH-HHHHHHcCCCCCCCCCCCHHHH
Confidence 11122334557889999999998999999999999999999999 999998653221 11112111111 112246899
Q ss_pred HHHHhhcCCChhhHHhHHHHHHHH
Q 042825 600 MAIDKTIQLDEENLANVSTVAELG 623 (631)
Q Consensus 600 ~~id~~L~~d~~~r~~~~~vl~la 623 (631)
+++.+|+..||.+||++.++++..
T Consensus 416 ~li~~cl~~dp~~RPt~~~i~~~L 439 (454)
T 1qcf_A 416 NIMMRCWKNRPEERPTFEYIQSVL 439 (454)
T ss_dssp HHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred HHHHHHccCChhHCcCHHHHHHHH
Confidence 999999999999999999987754
|
| >3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.89 E-value=7.2e-23 Score=211.00 Aligned_cols=200 Identities=24% Similarity=0.336 Sum_probs=150.0
Q ss_pred cCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc-----------------------
Q 042825 417 TNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK----------------------- 472 (631)
Q Consensus 417 t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~----------------------- 472 (631)
.++|...+.||+|+||+||+|+.. +++.||+|++... .....+.|.+|++++.+
T Consensus 9 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~--~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 86 (310)
T 3s95_A 9 PSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRF--DEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFIT 86 (310)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCC--CHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hhHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccC--CHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEE
Confidence 357888999999999999999976 5899999998543 45567889999999876
Q ss_pred -----CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCC
Q 042825 473 -----GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENG 523 (631)
Q Consensus 473 -----gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~ 523 (631)
|+|.+++.. ....++|..+..|+.+++.| +.+||+|||+++......
T Consensus 87 e~~~~~~L~~~l~~----~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 162 (310)
T 3s95_A 87 EYIKGGTLRGIIKS----MDSQYPWSQRVSFAKDIASGMAYLHSMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEK 162 (310)
T ss_dssp ECCTTCBHHHHHHH----CCTTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEECTTSCEEECCCTTCEECC---
T ss_pred EecCCCcHHHHHHh----ccCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCcCeEEECCCCCEEEeecccceeccccc
Confidence 567666642 23568999999999988876 468999999998764221
Q ss_pred ccc------------cccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHH-HHHHHHHhHh
Q 042825 524 KHS------------ILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEY-IIHLATWFQK 590 (631)
Q Consensus 524 ~~~------------~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~-~~~l~~~~~~ 590 (631)
... ......||+.|+|||++.+..++.++|||||||++|||++|..|+......... ..........
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~ 242 (310)
T 3s95_A 163 TQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFLDR 242 (310)
T ss_dssp -----------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSBCHHHHHHH
T ss_pred ccccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhhhhhccccc
Confidence 110 112467999999999999999999999999999999999999998753322100 0111122222
Q ss_pred h--hcCChhHHHHHHhhcCCChhhHHhHHHHHHH
Q 042825 591 M--HKNHDTFQMAIDKTIQLDEENLANVSTVAEL 622 (631)
Q Consensus 591 ~--~~~~~~l~~~id~~L~~d~~~r~~~~~vl~l 622 (631)
. ...++.+.+++.+|+..||.+||++.++++.
T Consensus 243 ~~~~~~~~~l~~li~~~l~~dP~~Rps~~~l~~~ 276 (310)
T 3s95_A 243 YCPPNCPPSFFPITVRCCDLDPEKRPSFVKLEHW 276 (310)
T ss_dssp TCCTTCCTTHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred cCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 1 2234679999999999999999999988764
|
| >3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=7.4e-23 Score=223.00 Aligned_cols=202 Identities=14% Similarity=0.180 Sum_probs=141.2
Q ss_pred hcCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhcCChhH-----------------
Q 042825 416 ATNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTKGTLGR----------------- 477 (631)
Q Consensus 416 ~t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~gsL~~----------------- 477 (631)
..++|+..+.||+|+||+||+|+.. +|+.||||++..........+++.+|+.++.+-....
T Consensus 60 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~ 139 (464)
T 3ttj_A 60 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEF 139 (464)
T ss_dssp EETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTC
T ss_pred ecCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccC
Confidence 4578999999999999999999865 5899999999865445566788999999987611100
Q ss_pred ---H-hHhhhh-----cCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCCc
Q 042825 478 ---H-LFNWEE-----EGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENGK 524 (631)
Q Consensus 478 ---~-L~~~~~-----~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~~ 524 (631)
+ +.++.. .....+++.+...++.+++.| +.+||+|||+|+.....
T Consensus 140 ~~~~lv~E~~~~~l~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~iiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~-- 217 (464)
T 3ttj_A 140 QDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS-- 217 (464)
T ss_dssp CEEEEEEECCSEEHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCCCC-----C--
T ss_pred CeEEEEEeCCCCCHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChHhEEEeCCCCEEEEEEEeeeecCCC--
Confidence 0 000000 001347888888888888776 46899999999876422
Q ss_pred cccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHH-----------------
Q 042825 525 HSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATW----------------- 587 (631)
Q Consensus 525 ~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~----------------- 587 (631)
...+..+||+.|+|||++.+..|+.++||||+||++|||++|+.||.+..... ....+...
T Consensus 218 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~-~~~~i~~~lg~p~~~~~~~~~~~~~ 295 (464)
T 3ttj_A 218 -FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYID-QWNKVIEQLGTPCPEFMKKLQPTVR 295 (464)
T ss_dssp -CCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHHHCSCCHHHHTTSCHHHH
T ss_pred -cccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHhcCCCCHHHHHHcchhhh
Confidence 23455789999999999999999999999999999999999999998653221 11111110
Q ss_pred --hHh-----------hhcC-------------ChhHHHHHHhhcCCChhhHHhHHHHHH
Q 042825 588 --FQK-----------MHKN-------------HDTFQMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 588 --~~~-----------~~~~-------------~~~l~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
... ..+. ++++.+++.++|..||.+|+++.++++
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~ 355 (464)
T 3ttj_A 296 NYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQ 355 (464)
T ss_dssp HHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred hHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 000 0000 245889999999999999999999875
|
| >3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.89 E-value=8.4e-23 Score=217.15 Aligned_cols=205 Identities=23% Similarity=0.292 Sum_probs=155.2
Q ss_pred hcCCcccceeecCCCceEEEEEEec--------CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc---------------
Q 042825 416 ATNNFSEENRLGRGGVGTVYKGELK--------DGTEVGVKRMELGSVTEQGIAQFESEITVLTK--------------- 472 (631)
Q Consensus 416 ~t~~f~~~~~iG~G~fg~Vyk~~~~--------~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~--------------- 472 (631)
..++|...+.||+|+||+||+|+.. .+..||||++.... .....+++.+|++++.+
T Consensus 67 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~ 145 (382)
T 3tt0_A 67 PRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDA-TEKDLSDLISEMEMMKMIGKHKNIINLLGACT 145 (382)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTC-CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred chhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeecccc-CHHHHHHHHHHHHHHHHhcCCchhhhheeeec
Confidence 3467889999999999999999852 24689999997653 45566789999988864
Q ss_pred --------------CChhHHhHhhhhc-----------CCCCCCHHHHHHHHHHhhcC----------------------
Q 042825 473 --------------GTLGRHLFNWEEE-----------GLEPLEWNTRLNIALDVARG---------------------- 505 (631)
Q Consensus 473 --------------gsL~~~L~~~~~~-----------~~~~L~~~~~~~I~~~ia~g---------------------- 505 (631)
|+|.+++...... ....+++..+..|+.+++.|
T Consensus 146 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~ 225 (382)
T 3tt0_A 146 QDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVT 225 (382)
T ss_dssp SSSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEC
T ss_pred cCCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCEecCCCCcceEEEc
Confidence 5888877643211 12458999999999998876
Q ss_pred --CCcEEEeeccccccCCCCccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChHHHH
Q 042825 506 --DDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT-GRKVVDATHSDPEYII 582 (631)
Q Consensus 506 --~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~Ellt-G~~P~~~~~~~~~~~~ 582 (631)
+.+||+|||+++...............||+.|+|||++.+..++.++|||||||++|||+| |+.||...... .
T Consensus 226 ~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~~--~-- 301 (382)
T 3tt0_A 226 EDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVE--E-- 301 (382)
T ss_dssp TTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH--H--
T ss_pred CCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHH--H--
Confidence 5679999999987653332233445678899999999999999999999999999999999 99999865322 1
Q ss_pred HHHHHhHhh------hcCChhHHHHHHhhcCCChhhHHhHHHHHHHHHhh
Q 042825 583 HLATWFQKM------HKNHDTFQMAIDKTIQLDEENLANVSTVAELGDHC 626 (631)
Q Consensus 583 ~l~~~~~~~------~~~~~~l~~~id~~L~~d~~~r~~~~~vl~lal~C 626 (631)
+...+... ...++++.+++.+|+..||.+|+++.++++..-..
T Consensus 302 -~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~ 350 (382)
T 3tt0_A 302 -LFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 350 (382)
T ss_dssp -HHHHHHTTCCCCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred -HHHHHHcCCCCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 12222111 12346899999999999999999999988765433
|
| >2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.89 E-value=4.9e-23 Score=216.21 Aligned_cols=195 Identities=22% Similarity=0.279 Sum_probs=132.3
Q ss_pred hcCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc----------------------
Q 042825 416 ATNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK---------------------- 472 (631)
Q Consensus 416 ~t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~---------------------- 472 (631)
..+.|...+.||+|+||.||+|+.. +++.||||++.... ..+.+.+|++++.+
T Consensus 51 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 126 (349)
T 2w4o_A 51 LSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV----DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLV 126 (349)
T ss_dssp GGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC--------------CHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch----hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEE
Confidence 4567999999999999999999976 48899999997542 34567889888875
Q ss_pred ------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC---------------------------CCcEEEeecccccc
Q 042825 473 ------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG---------------------------DDMRVADFGLVRLV 519 (631)
Q Consensus 473 ------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g---------------------------~~~kl~DFGla~~~ 519 (631)
|+|.+++. ....+++.....++.+++.| +.+||+|||+++..
T Consensus 127 ~e~~~~~~L~~~l~-----~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~ 201 (349)
T 2w4o_A 127 LELVTGGELFDRIV-----EKGYYSERDAADAVKQILEAVAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIV 201 (349)
T ss_dssp ECCCCSCBHHHHHT-----TCSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESSSSTTCCEEECCCC-----
T ss_pred EEeCCCCCHHHHHH-----hcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCcccEEEecCCCCCCEEEccCcccccc
Confidence 56655553 12457888888888887765 35789999999876
Q ss_pred CCCCccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHhH----h-hhcC
Q 042825 520 PENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQ----K-MHKN 594 (631)
Q Consensus 520 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~~----~-~~~~ 594 (631)
... .......||+.|+|||++.+..++.++|||||||++|||++|+.||............+..... . ....
T Consensus 202 ~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 278 (349)
T 2w4o_A 202 EHQ---VLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEYYFISPWWDEV 278 (349)
T ss_dssp --------------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHHHHHHHHTTCCCCCTTTTTTS
T ss_pred Ccc---cccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccHHHHHHHHhCCCccCCchhhhC
Confidence 321 2234567999999999999989999999999999999999999999765433211111111100 0 0123
Q ss_pred ChhHHHHHHhhcCCChhhHHhHHHHHHH
Q 042825 595 HDTFQMAIDKTIQLDEENLANVSTVAEL 622 (631)
Q Consensus 595 ~~~l~~~id~~L~~d~~~r~~~~~vl~l 622 (631)
+.++.+++.+||..||.+|+++.++++-
T Consensus 279 ~~~~~~li~~~L~~dP~~Rpt~~e~l~h 306 (349)
T 2w4o_A 279 SLNAKDLVRKLIVLDPKKRLTTFQALQH 306 (349)
T ss_dssp CHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred CHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 4689999999999999999999998763
|
| >2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.89 E-value=6.7e-23 Score=213.09 Aligned_cols=196 Identities=17% Similarity=0.268 Sum_probs=148.7
Q ss_pred cCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCH----HHHHHHHHHHHHHhc-------------------
Q 042825 417 TNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTE----QGIAQFESEITVLTK------------------- 472 (631)
Q Consensus 417 t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~----~~~~~~~~Ei~~l~~------------------- 472 (631)
.+.|...+.||+|+||.||+|+.. +|+.||||++....... ...+.+.+|++++.+
T Consensus 10 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 89 (326)
T 2y0a_A 10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDV 89 (326)
T ss_dssp HHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred ccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEE
Confidence 356889999999999999999976 58999999997654321 135678999999876
Q ss_pred ---------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------C----CcEEEeecc
Q 042825 473 ---------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------D----DMRVADFGL 515 (631)
Q Consensus 473 ---------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~----~~kl~DFGl 515 (631)
|+|.+++. ....+++.....++.+++.| + .+||+|||+
T Consensus 90 ~lv~e~~~~~~L~~~l~-----~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~ 164 (326)
T 2y0a_A 90 ILILELVAGGELFDFLA-----EKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL 164 (326)
T ss_dssp EEEEECCCSCBHHHHHT-----TSSCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCSSSSSCCEEECCCTT
T ss_pred EEEEEcCCCCCHHHHHH-----hcCCcCHHHHHHHHHHHHHHHHHHHHCCeEcCCCCHHHEEEecCCCCCCCEEEEECCC
Confidence 56666653 23468888888888888766 2 589999999
Q ss_pred ccccCCCCccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHH----hHh-
Q 042825 516 VRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATW----FQK- 590 (631)
Q Consensus 516 a~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~----~~~- 590 (631)
++...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||.+....+ ....+... ...
T Consensus 165 a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~ 240 (326)
T 2y0a_A 165 AHKIDFGN---EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE-TLANVSAVNYEFEDEY 240 (326)
T ss_dssp CEECCTTS---CCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHH-HHHHHHHTCCCCCHHH
T ss_pred CeECCCCC---ccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHH-HHHHHHhcCCCcCccc
Confidence 98764221 2345679999999999988899999999999999999999999997643221 11111111 001
Q ss_pred hhcCChhHHHHHHhhcCCChhhHHhHHHHHH
Q 042825 591 MHKNHDTFQMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 591 ~~~~~~~l~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
....+..+.+++.+||..||.+|+++.++++
T Consensus 241 ~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 271 (326)
T 2y0a_A 241 FSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ 271 (326)
T ss_dssp HTTSCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred cccCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 1123567899999999999999999999876
|
| >1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=8.9e-24 Score=221.30 Aligned_cols=195 Identities=19% Similarity=0.288 Sum_probs=142.6
Q ss_pred hhcCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCC-CHHHHHHHHHHHHHHhc--------------------
Q 042825 415 NATNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSV-TEQGIAQFESEITVLTK-------------------- 472 (631)
Q Consensus 415 ~~t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~-~~~~~~~~~~Ei~~l~~-------------------- 472 (631)
...++|...+.||+|+||.||+|+.+ +|+.||||+++.... .....+.+..|.+++..
T Consensus 14 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~ 93 (345)
T 1xjd_A 14 LKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENL 93 (345)
T ss_dssp --CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEE
T ss_pred CChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEE
Confidence 45678999999999999999999976 589999999975321 01234556777777643
Q ss_pred ---------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeecccccc
Q 042825 473 ---------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLV 519 (631)
Q Consensus 473 ---------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~ 519 (631)
|+|.+++.. ...+++.....++.+++.| +.+||+|||+++..
T Consensus 94 ~lv~E~~~gg~L~~~l~~-----~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~ 168 (345)
T 1xjd_A 94 FFVMEYLNGGDLMYHIQS-----CHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKEN 168 (345)
T ss_dssp EEEEECCTTCBHHHHHHH-----HSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCC
T ss_pred EEEEeCCCCCcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCChhhEEECCCCCEEEeEChhhhhc
Confidence 677776643 1357888888888777765 56899999999865
Q ss_pred CCCCccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHh-HhhhcCChhH
Q 042825 520 PENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWF-QKMHKNHDTF 598 (631)
Q Consensus 520 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~-~~~~~~~~~l 598 (631)
... .......+||+.|+|||++.+..++.++||||+||++|||++|+.||.+..... ....+.... ......+.++
T Consensus 169 ~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~-~~~~i~~~~~~~p~~~s~~~ 245 (345)
T 1xjd_A 169 MLG--DAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEE-LFHSIRMDNPFYPRWLEKEA 245 (345)
T ss_dssp CCT--TCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHCCCCCCTTSCHHH
T ss_pred ccC--CCcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHHH-HHHHHHhCCCCCCcccCHHH
Confidence 322 122456789999999999999999999999999999999999999998653221 111121111 0011135789
Q ss_pred HHHHHhhcCCChhhHHhHH
Q 042825 599 QMAIDKTIQLDEENLANVS 617 (631)
Q Consensus 599 ~~~id~~L~~d~~~r~~~~ 617 (631)
.+++.++|..||.+|+++.
T Consensus 246 ~~li~~lL~~dp~~R~~~~ 264 (345)
T 1xjd_A 246 KDLLVKLFVREPEKRLGVR 264 (345)
T ss_dssp HHHHHHHSCSSGGGSBTTB
T ss_pred HHHHHHHhcCCHhHcCCCh
Confidence 9999999999999999875
|
| >2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=7.5e-23 Score=211.77 Aligned_cols=201 Identities=21% Similarity=0.320 Sum_probs=134.5
Q ss_pred cCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc-----------------------
Q 042825 417 TNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK----------------------- 472 (631)
Q Consensus 417 t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~----------------------- 472 (631)
.++|+..+.||+|+||+||+|+.. +|+.||||++..... ....+.+.+|++++.+
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 82 (317)
T 2pmi_A 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSE-EGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVF 82 (317)
T ss_dssp ---------------CEEEEEECSSSCCEEEEEEEECCST-TCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEE
T ss_pred ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccc-cccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEE
Confidence 467889999999999999999965 589999999976432 2234678899999876
Q ss_pred ----CChhHHhHhhhh-cCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCC
Q 042825 473 ----GTLGRHLFNWEE-EGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENG 523 (631)
Q Consensus 473 ----gsL~~~L~~~~~-~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~ 523 (631)
|+|.+++..... .....+++.....++.+++.| +.+||+|||+++......
T Consensus 83 e~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~ 162 (317)
T 2pmi_A 83 EFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPV 162 (317)
T ss_dssp ECCCCBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCSSCEETTSCC
T ss_pred EecCCCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCChHHeEEcCCCCEEECcCccceecCCCc
Confidence 666666654221 122458888888888787765 568999999998764221
Q ss_pred ccccccccccCcccccccccccC-CCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHhH-------------
Q 042825 524 KHSILTKVAGTFGYLAPEYIVTG-RITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQ------------- 589 (631)
Q Consensus 524 ~~~~~~~~~gt~~Y~aPE~~~~~-~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~~------------- 589 (631)
.......||+.|+|||++.+. .++.++|||||||++|||++|+.||.+....+ ....+.....
T Consensus 163 --~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~ 239 (317)
T 2pmi_A 163 --NTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEE-QLKLIFDIMGTPNESLWPSVTKL 239 (317)
T ss_dssp --CCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCSCCTTTCGGGGGC
T ss_pred --ccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHHhCCCChhHhhhhhhh
Confidence 223456789999999998764 68999999999999999999999998654321 1111211100
Q ss_pred --------------------h--hhcCChhHHHHHHhhcCCChhhHHhHHHHHH
Q 042825 590 --------------------K--MHKNHDTFQMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 590 --------------------~--~~~~~~~l~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
. ....++++.+++.++|..||.+|+++.++++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~ 293 (317)
T 2pmi_A 240 PKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALH 293 (317)
T ss_dssp TTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred hhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhC
Confidence 0 0023467899999999999999999998875
|
| >3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=4.3e-23 Score=214.07 Aligned_cols=198 Identities=23% Similarity=0.278 Sum_probs=142.6
Q ss_pred cCCcccceeecCCCceEEEEEEecCCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc------------------------
Q 042825 417 TNNFSEENRLGRGGVGTVYKGELKDGTEVGVKRMELGSVTEQGIAQFESEITVLTK------------------------ 472 (631)
Q Consensus 417 t~~f~~~~~iG~G~fg~Vyk~~~~~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~------------------------ 472 (631)
.++|+..+.||+|+||+||+|+.. ++.||||++... ......+++|+.++.+
T Consensus 23 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 98 (322)
T 3soc_A 23 SMPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQ---DKQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLW 98 (322)
T ss_dssp TEEEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEE
T ss_pred hhhchhhheecccCceEEEEEEEC-CCEEEEEEeecC---chHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEE
Confidence 457899999999999999999875 799999999653 2344566778877755
Q ss_pred --------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC----------------------------------CCcEE
Q 042825 473 --------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG----------------------------------DDMRV 510 (631)
Q Consensus 473 --------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g----------------------------------~~~kl 510 (631)
|+|.+++.. ..++|..+..|+.+++.| +.+||
T Consensus 99 lv~e~~~~g~L~~~l~~------~~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL 172 (322)
T 3soc_A 99 LITAFHEKGSLSDFLKA------NVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACI 172 (322)
T ss_dssp EEEECCTTCBHHHHHHH------CCBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCCEEE
T ss_pred EEEecCCCCCHHHHHHh------cCCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCeEEE
Confidence 466666632 348898888888877653 36789
Q ss_pred EeeccccccCCCCccccccccccCccccccccccc-----CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChH------
Q 042825 511 ADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVT-----GRITAKVDVYSFGMILMDLITGRKVVDATHSDPE------ 579 (631)
Q Consensus 511 ~DFGla~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-----~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~------ 579 (631)
+|||+++...............||+.|+|||++.+ ..++.++|||||||++|||+||+.||.+......
T Consensus 173 ~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~ 252 (322)
T 3soc_A 173 ADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEE 252 (322)
T ss_dssp CCCTTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHH
T ss_pred ccCCcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhh
Confidence 99999987753333223445689999999999876 3467789999999999999999999975432110
Q ss_pred -----HHHHHHHHhHhh---------hcC---ChhHHHHHHhhcCCChhhHHhHHHHHHHHH
Q 042825 580 -----YIIHLATWFQKM---------HKN---HDTFQMAIDKTIQLDEENLANVSTVAELGD 624 (631)
Q Consensus 580 -----~~~~l~~~~~~~---------~~~---~~~l~~~id~~L~~d~~~r~~~~~vl~lal 624 (631)
....+....... +.. .+++.+++.+|+..||.+|+++.++++...
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~ 314 (322)
T 3soc_A 253 IGQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERIT 314 (322)
T ss_dssp HCSSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred hccCCchhhhhhhhhcccCCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 001111111000 000 123899999999999999999999887543
|
| >3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ... | Back alignment and structure |
|---|
Probab=99.89 E-value=2.2e-23 Score=216.84 Aligned_cols=199 Identities=22% Similarity=0.300 Sum_probs=142.4
Q ss_pred CCcccceeecCCCceEEEEEEec-CCc----EEEEEEEecCCCCHHHHHHHHHHHHHHhc--------------------
Q 042825 418 NNFSEENRLGRGGVGTVYKGELK-DGT----EVGVKRMELGSVTEQGIAQFESEITVLTK-------------------- 472 (631)
Q Consensus 418 ~~f~~~~~iG~G~fg~Vyk~~~~-~g~----~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~-------------------- 472 (631)
++|+..+.||+|+||+||+|++. +++ .||+|++.... .....++|.+|++++.+
T Consensus 15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 93 (327)
T 3poz_A 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT-SPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQL 93 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC--------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSSEEE
T ss_pred HHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeeccccc-CHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEE
Confidence 56889999999999999999964 344 36888876432 23355789999999876
Q ss_pred -------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCC
Q 042825 473 -------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPE 521 (631)
Q Consensus 473 -------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~ 521 (631)
|+|.+++.. ....+++.....++.+++.| +.+||+|||+++....
T Consensus 94 v~e~~~~g~L~~~l~~----~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~ 169 (327)
T 3poz_A 94 ITQLMPFGCLLDYVRE----HKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 169 (327)
T ss_dssp EEECCTTCBHHHHHHH----STTSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETTEEEECCTTHHHHHTT
T ss_pred EEEecCCCcHHHHHHh----cCCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCChheEEECCCCCEEEccCcceeEccC
Confidence 666666642 23568899999999888876 4578999999988754
Q ss_pred CCccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChHHHHHHHHHhH---hhhcCChh
Q 042825 522 NGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT-GRKVVDATHSDPEYIIHLATWFQ---KMHKNHDT 597 (631)
Q Consensus 522 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~Ellt-G~~P~~~~~~~~~~~~~l~~~~~---~~~~~~~~ 597 (631)
...........||+.|+|||++.+..++.++|||||||++|||+| |+.||+...... ......... .......+
T Consensus 170 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 247 (327)
T 3poz_A 170 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE--ISSILEKGERLPQPPICTID 247 (327)
T ss_dssp TCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG--HHHHHHTTCCCCCCTTBCHH
T ss_pred CcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHH--HHHHHHcCCCCCCCccCCHH
Confidence 333333345567889999999999999999999999999999999 999998654432 111111111 11122467
Q ss_pred HHHHHHhhcCCChhhHHhHHHHHHHH
Q 042825 598 FQMAIDKTIQLDEENLANVSTVAELG 623 (631)
Q Consensus 598 l~~~id~~L~~d~~~r~~~~~vl~la 623 (631)
+.+++.+|+..+|.+|+++.++++..
T Consensus 248 ~~~li~~~l~~~p~~Rps~~ell~~l 273 (327)
T 3poz_A 248 VYMIMVKCWMIDADSRPKFRELIIEF 273 (327)
T ss_dssp HHHHHHHHTCSCGGGSCCHHHHHHHH
T ss_pred HHHHHHHHcCCChhhCCCHHHHHHHH
Confidence 89999999999999999999988754
|
| >4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A | Back alignment and structure |
|---|
Probab=99.89 E-value=7.2e-23 Score=209.06 Aligned_cols=204 Identities=17% Similarity=0.185 Sum_probs=145.6
Q ss_pred hhcCCcccceeecCCCceEEEEEEe-cCCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc---------------------
Q 042825 415 NATNNFSEENRLGRGGVGTVYKGEL-KDGTEVGVKRMELGSVTEQGIAQFESEITVLTK--------------------- 472 (631)
Q Consensus 415 ~~t~~f~~~~~iG~G~fg~Vyk~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~--------------------- 472 (631)
...++|...+.||+|+||+||+|+. .+++.||||++..... ..++.+|++++.+
T Consensus 6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~----~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~ 81 (296)
T 4hgt_A 6 RVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK----HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNV 81 (296)
T ss_dssp -----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC-------CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEE
T ss_pred ccCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeeccccc----chHHHHHHHHHHHhcCCCCCCeeeeecCCCCceE
Confidence 3557899999999999999999996 4689999998765432 2346667766654
Q ss_pred -------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC---------------------------CCcEEEeeccccc
Q 042825 473 -------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG---------------------------DDMRVADFGLVRL 518 (631)
Q Consensus 473 -------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g---------------------------~~~kl~DFGla~~ 518 (631)
++|.+++.. ....+++.....++.+++.| +.+||+|||+++.
T Consensus 82 lv~e~~~~~L~~~~~~----~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~ 157 (296)
T 4hgt_A 82 MVMELLGPSLEDLFNF----CSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKK 157 (296)
T ss_dssp EEEECCCCBHHHHHHH----TTSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECCGGGTTCEEECCCTTCEE
T ss_pred EEEEccCCCHHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeeeeccCCCCeEEEecCcccee
Confidence 566666542 23468999999999888776 4578999999987
Q ss_pred cCCCCcc-----ccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCh--HHHHHHHH-HhHh
Q 042825 519 VPENGKH-----SILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDP--EYIIHLAT-WFQK 590 (631)
Q Consensus 519 ~~~~~~~-----~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~--~~~~~l~~-~~~~ 590 (631)
....... .......||+.|+|||.+.+..++.++|||||||++|||++|+.||....... .....+.. ....
T Consensus 158 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 237 (296)
T 4hgt_A 158 YRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMST 237 (296)
T ss_dssp CBCTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHS
T ss_pred ccCcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhcccccc
Confidence 6432221 12235679999999999999999999999999999999999999998643321 01111111 1111
Q ss_pred h-----hcCChhHHHHHHhhcCCChhhHHhHHHHHHHHHhh
Q 042825 591 M-----HKNHDTFQMAIDKTIQLDEENLANVSTVAELGDHC 626 (631)
Q Consensus 591 ~-----~~~~~~l~~~id~~L~~d~~~r~~~~~vl~lal~C 626 (631)
. ...++++.+++..|+..||.+||++.++++.....
T Consensus 238 ~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~ 278 (296)
T 4hgt_A 238 PIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNL 278 (296)
T ss_dssp CHHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHH
T ss_pred hhhhhhccCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHH
Confidence 1 12257899999999999999999999988865443
|
| >1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.89 E-value=4.9e-23 Score=213.67 Aligned_cols=197 Identities=14% Similarity=0.165 Sum_probs=149.8
Q ss_pred hcCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc----------------------
Q 042825 416 ATNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK---------------------- 472 (631)
Q Consensus 416 ~t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~---------------------- 472 (631)
..++|...+.||+|+||+||+|+.. +++.||+|.+... ......+.+|++++..
T Consensus 3 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~---~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv 79 (321)
T 1tki_A 3 LYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVK---GTDQVLVKKEISILNIARHRNILHLHESFESMEELVMI 79 (321)
T ss_dssp CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCC---THHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEE
T ss_pred hhhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecC---cccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEE
Confidence 4578999999999999999999976 5889999998753 2345678899999875
Q ss_pred ------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC--------------------------CCcEEEeeccccccC
Q 042825 473 ------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG--------------------------DDMRVADFGLVRLVP 520 (631)
Q Consensus 473 ------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g--------------------------~~~kl~DFGla~~~~ 520 (631)
|+|.+++. .....+++.....++.+++.| +.+||+|||+++...
T Consensus 80 ~e~~~g~~L~~~l~----~~~~~~~~~~~~~i~~qi~~al~~lH~~givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~ 155 (321)
T 1tki_A 80 FEFISGLDIFERIN----TSAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLK 155 (321)
T ss_dssp ECCCCCCBHHHHHT----SSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCTTCEECC
T ss_pred EEeCCCCCHHHHHH----hcCCCCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEccCCCCCEEEEECCCCeECC
Confidence 46665553 223468888888888888765 457899999998874
Q ss_pred CCCccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHH----hHh-hhcCC
Q 042825 521 ENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATW----FQK-MHKNH 595 (631)
Q Consensus 521 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~----~~~-~~~~~ 595 (631)
... ......||+.|+|||++.+..++.++||||+||++|||++|+.||.+..... ....+... ... ....+
T Consensus 156 ~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~-~~~~i~~~~~~~~~~~~~~~s 231 (321)
T 1tki_A 156 PGD---NFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQ-IIENIMNAEYTFDEEAFKEIS 231 (321)
T ss_dssp TTC---EEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHH-HHHHHHHTCCCCCHHHHTTSC
T ss_pred CCC---ccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHHH-HHHHHHcCCCCCChhhhccCC
Confidence 322 2345679999999999988889999999999999999999999998643221 11111110 011 11335
Q ss_pred hhHHHHHHhhcCCChhhHHhHHHHHHHH
Q 042825 596 DTFQMAIDKTIQLDEENLANVSTVAELG 623 (631)
Q Consensus 596 ~~l~~~id~~L~~d~~~r~~~~~vl~la 623 (631)
.++.+++.+||..||.+|+++.++++--
T Consensus 232 ~~~~~li~~~L~~dp~~Rpt~~e~l~hp 259 (321)
T 1tki_A 232 IEAMDFVDRLLVKERKSRMTASEALQHP 259 (321)
T ss_dssp HHHHHHHHTTSCSSGGGSCCHHHHHHSH
T ss_pred HHHHHHHHHHcCCChhHCcCHHHHhcCh
Confidence 7899999999999999999999988743
|
| >3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A | Back alignment and structure |
|---|
Probab=99.89 E-value=8e-23 Score=215.79 Aligned_cols=202 Identities=16% Similarity=0.212 Sum_probs=144.5
Q ss_pred hcCCcccceeecCCCceEEEEEEecC------CcEEEEEEEecCCCCHHHHHHHHHHHHHHh---------------c--
Q 042825 416 ATNNFSEENRLGRGGVGTVYKGELKD------GTEVGVKRMELGSVTEQGIAQFESEITVLT---------------K-- 472 (631)
Q Consensus 416 ~t~~f~~~~~iG~G~fg~Vyk~~~~~------g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~---------------~-- 472 (631)
..++|...+.||+|+||+||+|++.. ++.||||++..... .+.+|++++. +
T Consensus 33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~------~~~~e~~~~~~~~~~~~~~e~~~~~~l~ 106 (364)
T 3op5_A 33 AAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNG------PLFTELKFYQRAAKPEQIQKWIRTRKLK 106 (364)
T ss_dssp TCCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCH------HHHHHHHHHHHHCCHHHHHHHHHHTTCS
T ss_pred CCCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccch------hHHHHHHHHHhhhhhHHHHHHHHHhhcc
Confidence 45689999999999999999998764 47899999876431 2223332222 1
Q ss_pred -----------------------------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------
Q 042825 473 -----------------------------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------ 505 (631)
Q Consensus 473 -----------------------------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------ 505 (631)
++|.+++. .....+++..+..|+.+++.|
T Consensus 107 h~~iv~~~~~~~~~~~~~~~~~lv~e~~g~~L~~~~~----~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~N 182 (364)
T 3op5_A 107 YLGVPKYWGSGLHDKNGKSYRFMIMDRFGSDLQKIYE----ANAKRFSRKTVLQLSLRILDILEYIHEHEYVHGDIKASN 182 (364)
T ss_dssp CCCSCCEEEEEEEEETTEEEEEEEEECEEEEHHHHHH----HTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGG
T ss_pred CCCCCeEEeeeeeccCCcceEEEEEeCCCCCHHHHHH----hccCCCCHHHHHHHHHHHHHHHHHHHHCCeEEecCCHHH
Confidence 33444442 233568999999999998876
Q ss_pred --------CCcEEEeeccccccCCCCcc-----ccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCC
Q 042825 506 --------DDMRVADFGLVRLVPENGKH-----SILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVD 572 (631)
Q Consensus 506 --------~~~kl~DFGla~~~~~~~~~-----~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~ 572 (631)
+.+||+|||+++.+...... .......||+.|+|||++.+..++.++|||||||++|||+||+.||.
T Consensus 183 ill~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~ 262 (364)
T 3op5_A 183 LLLNYKNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWE 262 (364)
T ss_dssp EEEESSCTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTG
T ss_pred EEEecCCCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCcc
Confidence 45789999999876422111 11234569999999999999899999999999999999999999998
Q ss_pred CCCCChHHHHHH--------HHHhHhh---hcCChhHHHHHHhhcCCChhhHHhHHHHHHHHHhhh
Q 042825 573 ATHSDPEYIIHL--------ATWFQKM---HKNHDTFQMAIDKTIQLDEENLANVSTVAELGDHCC 627 (631)
Q Consensus 573 ~~~~~~~~~~~l--------~~~~~~~---~~~~~~l~~~id~~L~~d~~~r~~~~~vl~lal~C~ 627 (631)
+........... ..+.... ...++++.+++..|+..+|.+||++.++++....+.
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~ 328 (364)
T 3op5_A 263 DNLKDPKYVRDSKIRYRENIASLMDKCFPAANAPGEIAKYMETVKLLDYTEKPLYENLRDILLQGL 328 (364)
T ss_dssp GGTTCHHHHHHHHHHHHHCHHHHHHHHSCTTCCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHH
T ss_pred ccccCHHHHHHHHHHhhhhHHHHHHHhcccccCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHH
Confidence 654443222111 1111111 123578999999999999999999999988765554
|
| >2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.89 E-value=1.6e-23 Score=224.32 Aligned_cols=207 Identities=18% Similarity=0.259 Sum_probs=149.9
Q ss_pred cCHHHHHhhcCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCC-CHHHHHHHHHHHHHHhc-------------
Q 042825 408 IPIQVLRNATNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSV-TEQGIAQFESEITVLTK------------- 472 (631)
Q Consensus 408 ~~~~~l~~~t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~-~~~~~~~~~~Ei~~l~~------------- 472 (631)
+.+.+++...++|+..+.||+|+||+||+|+.+ +|+.||||++..... .....+.+.+|.+++.+
T Consensus 51 ~~~~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~ 130 (412)
T 2vd5_A 51 VRLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAF 130 (412)
T ss_dssp HHHHHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEE
T ss_pred hhhhhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEE
Confidence 345566667889999999999999999999976 699999999975321 11123347788887764
Q ss_pred ---------------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEee
Q 042825 473 ---------------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADF 513 (631)
Q Consensus 473 ---------------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DF 513 (631)
|+|.+++... ...+++.....++.+++.| +.+||+||
T Consensus 131 ~~~~~~~lVmE~~~gg~L~~~l~~~----~~~l~~~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILld~~g~vkL~DF 206 (412)
T 2vd5_A 131 QDENYLYLVMEYYVGGDLLTLLSKF----GERIPAEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNILLDRCGHIRLADF 206 (412)
T ss_dssp ECSSEEEEEECCCCSCBHHHHHHHH----SSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCC
T ss_pred eeCCEEEEEEcCCCCCcHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccCHHHeeecCCCCEEEeec
Confidence 6777777532 2357888777777777665 56899999
Q ss_pred ccccccCCCCccccccccccCcccccccccc-------cCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHH
Q 042825 514 GLVRLVPENGKHSILTKVAGTFGYLAPEYIV-------TGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLAT 586 (631)
Q Consensus 514 Gla~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-------~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~ 586 (631)
|+++...... .......+||+.|+|||++. ...|+.++|||||||++|||++|+.||.+....+ ....+..
T Consensus 207 Gla~~~~~~~-~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~-~~~~i~~ 284 (412)
T 2vd5_A 207 GSCLKLRADG-TVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAE-TYGKIVH 284 (412)
T ss_dssp TTCEECCTTS-CEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHH-HHHHHHT
T ss_pred hhheeccCCC-ccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHHH-HHHHHHh
Confidence 9998774322 22234568999999999987 3568999999999999999999999998654322 1222332
Q ss_pred HhHhh------hcCChhHHHHHHhhcCCChhhH---HhHHHHHH
Q 042825 587 WFQKM------HKNHDTFQMAIDKTIQLDEENL---ANVSTVAE 621 (631)
Q Consensus 587 ~~~~~------~~~~~~l~~~id~~L~~d~~~r---~~~~~vl~ 621 (631)
+.... ...+.+++++|.++|. +|.+| +++.++++
T Consensus 285 ~~~~~~~p~~~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~ 327 (412)
T 2vd5_A 285 YKEHLSLPLVDEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRT 327 (412)
T ss_dssp HHHHCCCC----CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHT
T ss_pred cccCcCCCccccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhc
Confidence 21111 1245789999999998 89887 47777654
|
| >1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=1.3e-22 Score=207.35 Aligned_cols=203 Identities=14% Similarity=0.169 Sum_probs=149.6
Q ss_pred cCCcccceeecCCCceEEEEEEe-cCCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc-----------------------
Q 042825 417 TNNFSEENRLGRGGVGTVYKGEL-KDGTEVGVKRMELGSVTEQGIAQFESEITVLTK----------------------- 472 (631)
Q Consensus 417 t~~f~~~~~iG~G~fg~Vyk~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~----------------------- 472 (631)
.++|...+.||+|+||.||+|+. .+|+.||||++...... +.+.+|++++.+
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~----~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv 84 (298)
T 1csn_A 9 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDA----PQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLV 84 (298)
T ss_dssp TTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTTS----CCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCCcc----HHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEE
Confidence 45799999999999999999996 46999999998754322 335556655543
Q ss_pred -----CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CC-----cEEEeeccccc
Q 042825 473 -----GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DD-----MRVADFGLVRL 518 (631)
Q Consensus 473 -----gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~-----~kl~DFGla~~ 518 (631)
++|.+++.. ....+++.....|+.+++.| +. +||+|||+++.
T Consensus 85 ~e~~~~~L~~~l~~----~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~ 160 (298)
T 1csn_A 85 IDLLGPSLEDLLDL----CGRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKF 160 (298)
T ss_dssp EECCCCBHHHHHHH----TTTCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEE
T ss_pred EEecCCCHHHHHHH----hccCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEeccCCCCCCCeEEEEECccccc
Confidence 566666642 23458999999999988876 22 89999999987
Q ss_pred cCCCCcc-----ccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHH--HHHHHHh---
Q 042825 519 VPENGKH-----SILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYI--IHLATWF--- 588 (631)
Q Consensus 519 ~~~~~~~-----~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~--~~l~~~~--- 588 (631)
....... .......||+.|+|||++.+..++.++|||||||++|||++|+.||.......... ..+....
T Consensus 161 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 240 (298)
T 1csn_A 161 YRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQST 240 (298)
T ss_dssp SBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHS
T ss_pred cccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHHhhccCc
Confidence 6532211 12345679999999999999899999999999999999999999998754322111 1111111
Q ss_pred --Hhh-hcCChhHHHHHHhhcCCChhhHHhHHHHHHHHHhhh
Q 042825 589 --QKM-HKNHDTFQMAIDKTIQLDEENLANVSTVAELGDHCC 627 (631)
Q Consensus 589 --~~~-~~~~~~l~~~id~~L~~d~~~r~~~~~vl~lal~C~ 627 (631)
... ...++++.+++..|+..||.+||++.++++......
T Consensus 241 ~~~~~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~ 282 (298)
T 1csn_A 241 PLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVL 282 (298)
T ss_dssp CHHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHH
T ss_pred cHHHHHhhCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHHH
Confidence 011 123568999999999999999999999888765544
|
| >3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.89 E-value=2.6e-23 Score=219.89 Aligned_cols=206 Identities=22% Similarity=0.322 Sum_probs=154.9
Q ss_pred cCCcccceeecCCCceEEEEEEec------CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc------------------
Q 042825 417 TNNFSEENRLGRGGVGTVYKGELK------DGTEVGVKRMELGSVTEQGIAQFESEITVLTK------------------ 472 (631)
Q Consensus 417 t~~f~~~~~iG~G~fg~Vyk~~~~------~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~------------------ 472 (631)
.++|...+.||+|+||+||+|++. +++.||||++... .......++.+|+.++.+
T Consensus 70 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~ 148 (367)
T 3l9p_A 70 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEV-CSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLP 148 (367)
T ss_dssp GGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSS-CCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred HhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccc-cChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCC
Confidence 357889999999999999999853 3678999998653 244566789999998876
Q ss_pred ----------CChhHHhHhhhh--cCCCCCCHHHHHHHHHHhhcC---------------------------CCcEEEee
Q 042825 473 ----------GTLGRHLFNWEE--EGLEPLEWNTRLNIALDVARG---------------------------DDMRVADF 513 (631)
Q Consensus 473 ----------gsL~~~L~~~~~--~~~~~L~~~~~~~I~~~ia~g---------------------------~~~kl~DF 513 (631)
|+|.+++..... .....+.+.....|+.+++.| ..+||+||
T Consensus 149 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~~~~kL~DF 228 (367)
T 3l9p_A 149 RFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDF 228 (367)
T ss_dssp CEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECCC
T ss_pred CEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEEecCCCCceEEECCC
Confidence 577777754221 122458999999999888876 13899999
Q ss_pred ccccccCCCCccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChHHHHHHHHHhHh--
Q 042825 514 GLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT-GRKVVDATHSDPEYIIHLATWFQK-- 590 (631)
Q Consensus 514 Gla~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~Ellt-G~~P~~~~~~~~~~~~~l~~~~~~-- 590 (631)
|+++...............||+.|+|||++.+..++.++|||||||++|||+| |+.||...... . +...+..
T Consensus 229 G~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~--~---~~~~i~~~~ 303 (367)
T 3l9p_A 229 GMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ--E---VLEFVTSGG 303 (367)
T ss_dssp HHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH--H---HHHHHHTTC
T ss_pred ccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH--H---HHHHHHcCC
Confidence 99986532222222344568999999999999999999999999999999998 99999864321 1 1121111
Q ss_pred ----hhcCChhHHHHHHhhcCCChhhHHhHHHHHHHHHhhhc
Q 042825 591 ----MHKNHDTFQMAIDKTIQLDEENLANVSTVAELGDHCCA 628 (631)
Q Consensus 591 ----~~~~~~~l~~~id~~L~~d~~~r~~~~~vl~lal~C~~ 628 (631)
....+..+.+++.+|+..||.+|+++.++++....|.+
T Consensus 304 ~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~~ 345 (367)
T 3l9p_A 304 RMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQ 345 (367)
T ss_dssp CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCCCCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhh
Confidence 11224679999999999999999999999988777654
|
| >3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A | Back alignment and structure |
|---|
Probab=99.89 E-value=1.9e-22 Score=205.99 Aligned_cols=202 Identities=17% Similarity=0.192 Sum_probs=149.7
Q ss_pred hcCCcccceeecCCCceEEEEEEe-cCCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc----------------------
Q 042825 416 ATNNFSEENRLGRGGVGTVYKGEL-KDGTEVGVKRMELGSVTEQGIAQFESEITVLTK---------------------- 472 (631)
Q Consensus 416 ~t~~f~~~~~iG~G~fg~Vyk~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~---------------------- 472 (631)
..++|...+.||+|+||.||+|+. .+|+.||||++...... +++.+|++++.+
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~----~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~l 82 (296)
T 3uzp_A 7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH----PQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVM 82 (296)
T ss_dssp ETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSSC----CHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEE
T ss_pred eccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcch----hHHHHHHHHHHHhhcCCCCCccccccCCCCceEE
Confidence 457899999999999999999996 46999999998765422 357777777654
Q ss_pred ------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC---------------------------CCcEEEeecccccc
Q 042825 473 ------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG---------------------------DDMRVADFGLVRLV 519 (631)
Q Consensus 473 ------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g---------------------------~~~kl~DFGla~~~ 519 (631)
++|.+++.. ....+++.....++.+++.| +.+||+|||+++..
T Consensus 83 v~e~~~~~L~~~~~~----~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~ 158 (296)
T 3uzp_A 83 VMELLGPSLEDLFNF----CSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKY 158 (296)
T ss_dssp EEECCCCBHHHHHHH----TTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECCGGGTTCEEECCCTTCEEC
T ss_pred EEEecCCCHHHHHHh----hccCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHeEEecCCCCCeEEEeeCCCcccc
Confidence 566666642 23468899999998888766 45789999999876
Q ss_pred CCCCcc-----ccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCh--HHHHHHHH-HhHhh
Q 042825 520 PENGKH-----SILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDP--EYIIHLAT-WFQKM 591 (631)
Q Consensus 520 ~~~~~~-----~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~--~~~~~l~~-~~~~~ 591 (631)
...... .......||+.|+|||.+.+..++.++|||||||++|||++|+.||....... .....+.. .....
T Consensus 159 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 238 (296)
T 3uzp_A 159 RDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTP 238 (296)
T ss_dssp BCTTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSC
T ss_pred cccccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccccCCc
Confidence 532221 11245679999999999999999999999999999999999999998643211 11111111 11111
Q ss_pred -----hcCChhHHHHHHhhcCCChhhHHhHHHHHHHHHh
Q 042825 592 -----HKNHDTFQMAIDKTIQLDEENLANVSTVAELGDH 625 (631)
Q Consensus 592 -----~~~~~~l~~~id~~L~~d~~~r~~~~~vl~lal~ 625 (631)
...++++.+++..|+..||.+||++.++++....
T Consensus 239 ~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~ 277 (296)
T 3uzp_A 239 IEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRN 277 (296)
T ss_dssp HHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHH
T ss_pred hHHHHhhCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHH
Confidence 1235789999999999999999999998876443
|
| >1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.88 E-value=3.9e-23 Score=215.87 Aligned_cols=212 Identities=21% Similarity=0.262 Sum_probs=155.1
Q ss_pred HHhhcCCcccceeecCCCceEEEEEEec------CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc--------------
Q 042825 413 LRNATNNFSEENRLGRGGVGTVYKGELK------DGTEVGVKRMELGSVTEQGIAQFESEITVLTK-------------- 472 (631)
Q Consensus 413 l~~~t~~f~~~~~iG~G~fg~Vyk~~~~------~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~-------------- 472 (631)
+....++|...+.||+|+||.||+|+.. +++.||||++.... .....++|.+|++++.+
T Consensus 42 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~ 120 (343)
T 1luf_A 42 LEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEA-SADMQADFQREAALMAEFDNPNIVKLLGVCA 120 (343)
T ss_dssp TBCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTC-CHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC
T ss_pred eEecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEecccc-CHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc
Confidence 3445678999999999999999999975 34899999997643 34556789999999876
Q ss_pred --------------CChhHHhHhhhhc-------------------CCCCCCHHHHHHHHHHhhcC--------------
Q 042825 473 --------------GTLGRHLFNWEEE-------------------GLEPLEWNTRLNIALDVARG-------------- 505 (631)
Q Consensus 473 --------------gsL~~~L~~~~~~-------------------~~~~L~~~~~~~I~~~ia~g-------------- 505 (631)
|+|.+++...... ....+++.....|+.++++|
T Consensus 121 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dl 200 (343)
T 1luf_A 121 VGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDL 200 (343)
T ss_dssp SSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCC
T ss_pred cCCceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCC
Confidence 6888877642111 12568999999999888876
Q ss_pred ----------CCcEEEeeccccccCCCCccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCC
Q 042825 506 ----------DDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT-GRKVVDAT 574 (631)
Q Consensus 506 ----------~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~Ellt-G~~P~~~~ 574 (631)
+.+||+|||+++...............||+.|+|||++.+..++.++|||||||++|||+| |+.||.+.
T Consensus 201 kp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~ 280 (343)
T 1luf_A 201 ATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGM 280 (343)
T ss_dssp SGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTS
T ss_pred CcceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCCC
Confidence 4678999999987642222222344678999999999998899999999999999999999 99999864
Q ss_pred CCChHHHHHHHHHhH--hhhcCChhHHHHHHhhcCCChhhHHhHHHHHHHHHhh
Q 042825 575 HSDPEYIIHLATWFQ--KMHKNHDTFQMAIDKTIQLDEENLANVSTVAELGDHC 626 (631)
Q Consensus 575 ~~~~~~~~~l~~~~~--~~~~~~~~l~~~id~~L~~d~~~r~~~~~vl~lal~C 626 (631)
...+ ....+..... .....+.++.+++..|+..||.+|+++.++++.....
T Consensus 281 ~~~~-~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~ 333 (343)
T 1luf_A 281 AHEE-VIYYVRDGNILACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRM 333 (343)
T ss_dssp CHHH-HHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHT
T ss_pred ChHH-HHHHHhCCCcCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHH
Confidence 3221 1111111000 0112246899999999999999999999988765443
|
| >3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=8.5e-23 Score=220.45 Aligned_cols=194 Identities=17% Similarity=0.211 Sum_probs=144.8
Q ss_pred hcCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc----------------------
Q 042825 416 ATNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK---------------------- 472 (631)
Q Consensus 416 ~t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~---------------------- 472 (631)
...+|+..+.||+|+||+||+|+.. +++.||||++... ....+++.+|++++..
T Consensus 95 ~~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~ 171 (429)
T 3kvw_A 95 VAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNE---KRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFR 171 (429)
T ss_dssp ETTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSC---HHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEET
T ss_pred ccCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCc---cchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccC
Confidence 4567999999999999999999866 5899999999753 3345667778777654
Q ss_pred -----------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CC--cEEEeecc
Q 042825 473 -----------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DD--MRVADFGL 515 (631)
Q Consensus 473 -----------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~--~kl~DFGl 515 (631)
++|.+++.. .....+++.....|+.+++.| +. +||+|||+
T Consensus 172 ~~~~lv~e~~~~~L~~~l~~---~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NILl~~~~~~~vkL~DFG~ 248 (429)
T 3kvw_A 172 NHICMTFELLSMNLYELIKK---NKFQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGS 248 (429)
T ss_dssp TEEEEEECCCCCBHHHHHHH---TTTCCCCHHHHHHHHHHHHHHHHHHHHHTEECSCCSGGGEEESSTTSCCEEECCCTT
T ss_pred CeEEEEEeccCCCHHHHHHh---ccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEccCCCcceEEeeccc
Confidence 445555532 233458999999999888876 23 89999999
Q ss_pred ccccCCCCccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHH--------
Q 042825 516 VRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATW-------- 587 (631)
Q Consensus 516 a~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~-------- 587 (631)
++.... .....+||+.|+|||++.+..++.++|||||||++|||+||+.||.+....+ ....+...
T Consensus 249 a~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~-~l~~i~~~~~~p~~~~ 322 (429)
T 3kvw_A 249 SCYEHQ-----RVYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGD-QLACMIELLGMPSQKL 322 (429)
T ss_dssp CEETTC-----CCCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHHHCCCCHHH
T ss_pred ceecCC-----cccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHcCCCCHHH
Confidence 986532 1234679999999999999999999999999999999999999998654321 11111110
Q ss_pred hHh------h--------------------------------------------h--cCChhHHHHHHhhcCCChhhHHh
Q 042825 588 FQK------M--------------------------------------------H--KNHDTFQMAIDKTIQLDEENLAN 615 (631)
Q Consensus 588 ~~~------~--------------------------------------------~--~~~~~l~~~id~~L~~d~~~r~~ 615 (631)
... . . ..++.+.+++.+||..||.+|++
T Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dli~~~L~~dP~~Rpt 402 (429)
T 3kvw_A 323 LDASKRAKNFVSSKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDPAVRMT 402 (429)
T ss_dssp HHTBTTHHHHBCTTSCBTTSCEECCCC--CEECCEECTTCCEECSTTCSCHHHHTTTCCCHHHHHHHHHHTCSSTTTSCC
T ss_pred HHhhhhhhhccCCCCCcccccccccccccccccccccchhhccCCccchhhHhhccccchHHHHHHHHHHCCCChhhCCC
Confidence 000 0 0 01356789999999999999999
Q ss_pred HHHHHH
Q 042825 616 VSTVAE 621 (631)
Q Consensus 616 ~~~vl~ 621 (631)
+.++++
T Consensus 403 a~e~L~ 408 (429)
T 3kvw_A 403 PGQALR 408 (429)
T ss_dssp HHHHHT
T ss_pred HHHHhC
Confidence 999875
|
| >3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=6.4e-23 Score=208.33 Aligned_cols=202 Identities=19% Similarity=0.281 Sum_probs=153.4
Q ss_pred hcCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc----------------------
Q 042825 416 ATNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK---------------------- 472 (631)
Q Consensus 416 ~t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~---------------------- 472 (631)
..++|+..+.||+|+||.||+|+.. +|+.||+|++..........+++.+|++++.+
T Consensus 4 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v 83 (284)
T 3kk8_A 4 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLV 83 (284)
T ss_dssp TTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEE
Confidence 4578999999999999999999976 58999999998776666677889999998876
Q ss_pred ------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC---------------------------CCcEEEeecccccc
Q 042825 473 ------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG---------------------------DDMRVADFGLVRLV 519 (631)
Q Consensus 473 ------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g---------------------------~~~kl~DFGla~~~ 519 (631)
+++.+++.. ...+++.....++.+++.| ..+||+|||+++..
T Consensus 84 ~e~~~~~~l~~~~~~-----~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~ 158 (284)
T 3kk8_A 84 FDLVTGGELFEDIVA-----REFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEV 158 (284)
T ss_dssp ECCCCSCBHHHHHHH-----HSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSSTTCCEEECCCTTCEEC
T ss_pred EecCCCCCHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCCcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEc
Confidence 455555432 1357888888888887765 22799999999876
Q ss_pred CCCCccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHhHh-h----hcC
Q 042825 520 PENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQK-M----HKN 594 (631)
Q Consensus 520 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~~~-~----~~~ 594 (631)
... .......||+.|+|||++.+..++.++||||+|+++|||++|+.||....... ....+...... . ...
T Consensus 159 ~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 234 (284)
T 3kk8_A 159 NDS---EAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHR-LYAQIKAGAYDYPSPEWDTV 234 (284)
T ss_dssp CSS---CBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHTCCCCCTTTTTTS
T ss_pred ccC---ccccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchhH-HHHHHHhccccCCchhhccc
Confidence 422 22345679999999999999999999999999999999999999997643221 11111111000 0 123
Q ss_pred ChhHHHHHHhhcCCChhhHHhHHHHHHHHHhh
Q 042825 595 HDTFQMAIDKTIQLDEENLANVSTVAELGDHC 626 (631)
Q Consensus 595 ~~~l~~~id~~L~~d~~~r~~~~~vl~lal~C 626 (631)
++++.+++.+||..||.+|+++.++++.-..+
T Consensus 235 ~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~ 266 (284)
T 3kk8_A 235 TPEAKSLIDSMLTVNPKKRITADQALKVPWIC 266 (284)
T ss_dssp CHHHHHHHHHHSCSSTTTSCCHHHHTTSHHHH
T ss_pred CHHHHHHHHHHcccChhhCCCHHHHhcCcccc
Confidence 46899999999999999999999998765544
|
| >3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=4e-23 Score=214.89 Aligned_cols=197 Identities=18% Similarity=0.275 Sum_probs=133.5
Q ss_pred cCCcccceeecCCCceEEEEEEe----cCCcEEEEEEEecCCCC--HHHHHHHHHHHHHHhc------------------
Q 042825 417 TNNFSEENRLGRGGVGTVYKGEL----KDGTEVGVKRMELGSVT--EQGIAQFESEITVLTK------------------ 472 (631)
Q Consensus 417 t~~f~~~~~iG~G~fg~Vyk~~~----~~g~~vAvK~l~~~~~~--~~~~~~~~~Ei~~l~~------------------ 472 (631)
.++|+..+.||+|+||.||+++. .+|+.||||++...... ......+.+|++++.+
T Consensus 16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 95 (327)
T 3a62_A 16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGK 95 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSC
T ss_pred HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCE
Confidence 45799999999999999999987 46899999999765321 2234567889888875
Q ss_pred ----------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccc
Q 042825 473 ----------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRL 518 (631)
Q Consensus 473 ----------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~ 518 (631)
|+|.+++.. ...+.+.....++.+++.| +.+||+|||+++.
T Consensus 96 ~~lv~e~~~~~~L~~~l~~-----~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~ 170 (327)
T 3a62_A 96 LYLILEYLSGGELFMQLER-----EGIFMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKE 170 (327)
T ss_dssp EEEEEECCTTEEHHHHHHH-----HSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEECTTSCEEECCCSCC--
T ss_pred EEEEEeCCCCCcHHHHHHh-----CCCCCHHHHHHHHHHHHHHHHHHHhCCEEcccCCHHHeEECCCCcEEEEeCCcccc
Confidence 455555532 1346777777777777655 5679999999986
Q ss_pred cCCCCccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHh-HhhhcCChh
Q 042825 519 VPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWF-QKMHKNHDT 597 (631)
Q Consensus 519 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~-~~~~~~~~~ 597 (631)
.... .......+||+.|+|||++.+..++.++|||||||++|||++|+.||.+..... ....+.... ......+.+
T Consensus 171 ~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~-~~~~i~~~~~~~p~~~~~~ 247 (327)
T 3a62_A 171 SIHD--GTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKK-TIDKILKCKLNLPPYLTQE 247 (327)
T ss_dssp ----------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHTCCCCCTTSCHH
T ss_pred cccC--CccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHHH-HHHHHHhCCCCCCCCCCHH
Confidence 5322 122345689999999999998899999999999999999999999998653221 111111110 111123468
Q ss_pred HHHHHHhhcCCChhhHH-----hHHHHHH
Q 042825 598 FQMAIDKTIQLDEENLA-----NVSTVAE 621 (631)
Q Consensus 598 l~~~id~~L~~d~~~r~-----~~~~vl~ 621 (631)
+.+++.++|..||.+|+ ++.++++
T Consensus 248 ~~~li~~~L~~dp~~R~~~~~~~~~e~l~ 276 (327)
T 3a62_A 248 ARDLLKKLLKRNAASRLGAGPGDAGEVQA 276 (327)
T ss_dssp HHHHHHHHSCSCGGGSTTSSTTTHHHHHH
T ss_pred HHHHHHHHHhcCHhhccCCCCCCHHHHHc
Confidence 99999999999999998 6666654
|
| >4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.88 E-value=4.2e-23 Score=219.84 Aligned_cols=193 Identities=17% Similarity=0.228 Sum_probs=139.9
Q ss_pred cCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCH-HHHHHHHHHHHHHhc----------------------
Q 042825 417 TNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTE-QGIAQFESEITVLTK---------------------- 472 (631)
Q Consensus 417 t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~-~~~~~~~~Ei~~l~~---------------------- 472 (631)
.++|+..++||+|+||+||+|+.+ +++.||||+++...... ...+.+.+|..++.+
T Consensus 51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l 130 (396)
T 4dc2_A 51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF 130 (396)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEE
T ss_pred hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEE
Confidence 467999999999999999999976 58899999998653322 233456777777643
Q ss_pred -------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCC
Q 042825 473 -------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPE 521 (631)
Q Consensus 473 -------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~ 521 (631)
|+|..++.. ...+++.....++.+++.| +.+||+|||+++....
T Consensus 131 V~E~~~gg~L~~~l~~-----~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl~~~g~ikL~DFGla~~~~~ 205 (396)
T 4dc2_A 131 VIEYVNGGDLMFHMQR-----QRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLR 205 (396)
T ss_dssp EEECCTTCBHHHHHHH-----HSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCC
T ss_pred EEEcCCCCcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEECCCCCEEEeecceeeeccc
Confidence 566666643 1357888888888777765 5689999999986421
Q ss_pred CCccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHH----HHHHHHHh-H----hhh
Q 042825 522 NGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEY----IIHLATWF-Q----KMH 592 (631)
Q Consensus 522 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~----~~~l~~~~-~----~~~ 592 (631)
. .......+||+.|+|||++.+..++.++||||+||++|||++|+.||+........ ...+.... . ...
T Consensus 206 ~--~~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~ 283 (396)
T 4dc2_A 206 P--GDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPR 283 (396)
T ss_dssp T--TCCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHHCCCCCCT
T ss_pred C--CCccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhccccCCCC
Confidence 2 12345678999999999999999999999999999999999999999743221100 01111111 1 111
Q ss_pred cCChhHHHHHHhhcCCChhhHHhH
Q 042825 593 KNHDTFQMAIDKTIQLDEENLANV 616 (631)
Q Consensus 593 ~~~~~l~~~id~~L~~d~~~r~~~ 616 (631)
..+.++.+++.++|..||.+|+++
T Consensus 284 ~~s~~~~~li~~lL~~dP~~R~~~ 307 (396)
T 4dc2_A 284 SLSVKAASVLKSFLNKDPKERLGC 307 (396)
T ss_dssp TSCHHHHHHHHHHTCSCTTTSTTC
T ss_pred cCCHHHHHHHHHHhcCCHhHcCCC
Confidence 235688999999999999999874
|
| >1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.88 E-value=3.3e-23 Score=214.64 Aligned_cols=194 Identities=19% Similarity=0.272 Sum_probs=144.3
Q ss_pred cCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCC-HHHHHHHHHHHHHHhc----------------------
Q 042825 417 TNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVT-EQGIAQFESEITVLTK---------------------- 472 (631)
Q Consensus 417 t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~-~~~~~~~~~Ei~~l~~---------------------- 472 (631)
.++|+..+.||+|+||+||+|+.. +|+.||+|++...... ....+.+.+|+.++..
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv 84 (318)
T 1fot_A 5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMI 84 (318)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEE
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEE
Confidence 357899999999999999999976 6999999999753211 1234567888888865
Q ss_pred ------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCC
Q 042825 473 ------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPEN 522 (631)
Q Consensus 473 ------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~ 522 (631)
|+|.+++.. ...+++.....++.+++.| +.+||+|||+++....
T Consensus 85 ~e~~~gg~L~~~l~~-----~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~- 158 (318)
T 1fot_A 85 MDYIEGGELFSLLRK-----SQRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPD- 158 (318)
T ss_dssp ECCCCSCBHHHHHHH-----TSSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTTSCEEECCCSSCEECSS-
T ss_pred EeCCCCCCHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChheEEEcCCCCEEEeecCcceecCC-
Confidence 567666642 2357787777777777665 5689999999987642
Q ss_pred CccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHH-hHhhhcCChhHHHH
Q 042825 523 GKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATW-FQKMHKNHDTFQMA 601 (631)
Q Consensus 523 ~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~-~~~~~~~~~~l~~~ 601 (631)
.....+||+.|+|||++.+..++.++||||+||++|||++|+.||....... ....+... .......++++.++
T Consensus 159 ----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~-~~~~i~~~~~~~p~~~~~~~~~l 233 (318)
T 1fot_A 159 ----VTYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMK-TYEKILNAELRFPPFFNEDVKDL 233 (318)
T ss_dssp ----CBCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHH-HHHHHHHCCCCCCTTSCHHHHHH
T ss_pred ----ccccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHH-HHHHHHhCCCCCCCCCCHHHHHH
Confidence 1235689999999999999999999999999999999999999998643221 11111111 11111235689999
Q ss_pred HHhhcCCChhhHH-----hHHHHHH
Q 042825 602 IDKTIQLDEENLA-----NVSTVAE 621 (631)
Q Consensus 602 id~~L~~d~~~r~-----~~~~vl~ 621 (631)
+.++|..||.+|+ ++.++++
T Consensus 234 i~~lL~~dp~~R~~~~~~~~~~i~~ 258 (318)
T 1fot_A 234 LSRLITRDLSQRLGNLQNGTEDVKN 258 (318)
T ss_dssp HHHHTCSCTTTCTTSSTTTTHHHHT
T ss_pred HHHHhccCHHHcCCCcCCCHHHHhc
Confidence 9999999999998 7776654
|
| >3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=6.5e-23 Score=214.88 Aligned_cols=193 Identities=18% Similarity=0.252 Sum_probs=141.8
Q ss_pred cCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCC-CHHHHHHHHHHHHHHhc----------------------
Q 042825 417 TNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSV-TEQGIAQFESEITVLTK---------------------- 472 (631)
Q Consensus 417 t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~-~~~~~~~~~~Ei~~l~~---------------------- 472 (631)
.++|+..+.||+|+||.||+|+.+ +++.||||++..... .....+.+.+|+.++.+
T Consensus 8 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~l 87 (345)
T 3a8x_A 8 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF 87 (345)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEE
Confidence 357889999999999999999976 589999999986543 33455678888888754
Q ss_pred -------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCC
Q 042825 473 -------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPE 521 (631)
Q Consensus 473 -------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~ 521 (631)
|+|.+++.. ...+++.....++.+++.| +.+||+|||+++....
T Consensus 88 v~e~~~gg~L~~~l~~-----~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~ 162 (345)
T 3a8x_A 88 VIEYVNGGDLMFHMQR-----QRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLR 162 (345)
T ss_dssp EECCCCSCBHHHHHHH-----HSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCGGGCBCSCC
T ss_pred EEeCCCCCcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEECCCCCEEEEeccccccccC
Confidence 566666642 1357888888887777765 5689999999986432
Q ss_pred CCccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChH----HHHHHHHHh-Hh----hh
Q 042825 522 NGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPE----YIIHLATWF-QK----MH 592 (631)
Q Consensus 522 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~----~~~~l~~~~-~~----~~ 592 (631)
.. ......+||+.|+|||++.+..++.++||||+||++|||++|+.||+....... ....+.... .. ..
T Consensus 163 ~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~ 240 (345)
T 3a8x_A 163 PG--DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPR 240 (345)
T ss_dssp TT--CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHCCCCCCT
T ss_pred CC--CcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcCCCCCCC
Confidence 21 234567899999999999999999999999999999999999999975321110 001111111 11 11
Q ss_pred cCChhHHHHHHhhcCCChhhHHhH
Q 042825 593 KNHDTFQMAIDKTIQLDEENLANV 616 (631)
Q Consensus 593 ~~~~~l~~~id~~L~~d~~~r~~~ 616 (631)
..+.++.+++.++|..||.+|+++
T Consensus 241 ~~s~~~~~li~~lL~~dP~~R~~~ 264 (345)
T 3a8x_A 241 SLSVKAASVLKSFLNKDPKERLGC 264 (345)
T ss_dssp TSCHHHHHHHHHHTCSSTTTSTTC
T ss_pred CCCHHHHHHHHHHhcCCHhHCCCC
Confidence 235688999999999999999874
|
| >3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=99.88 E-value=1.2e-22 Score=221.30 Aligned_cols=202 Identities=18% Similarity=0.228 Sum_probs=132.3
Q ss_pred hcCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc----------------------
Q 042825 416 ATNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK---------------------- 472 (631)
Q Consensus 416 ~t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~---------------------- 472 (631)
..++|...+.||+|+||+||+|+.. +|+.||||++..........+++.+|++++.+
T Consensus 51 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 130 (458)
T 3rp9_A 51 IPDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFD 130 (458)
T ss_dssp SCTTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCC
T ss_pred cCCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCc
Confidence 3468999999999999999999866 68999999997665555667889999999876
Q ss_pred ----------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccc
Q 042825 473 ----------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRL 518 (631)
Q Consensus 473 ----------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~ 518 (631)
|+|.+++ .....+++.+...++.+++.| +.+||+|||+|+.
T Consensus 131 ~~~lv~e~~~~~L~~~~-----~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~ 205 (458)
T 3rp9_A 131 ELYVVLEIADSDFKKLF-----RTPVYLTELHIKTLLYNLLVGVKYVHSAGILHRDLKPANCLVNQDCSVKVCDFGLART 205 (458)
T ss_dssp CEEEEECCCSEEHHHHH-----HSSCCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTCCEEECCCTTCBC
T ss_pred eEEEEEeccccchhhhc-----ccCCCCCHHHHHHHHHHHHHHHHHHHhCCcCCCCCChhhEEECCCCCEeecccccchh
Confidence 2222222 123458888888888888876 5689999999987
Q ss_pred cCCCCcc-------------------------ccccccccCccccccccc-ccCCCCchhhHHHHHHHHHHHHc------
Q 042825 519 VPENGKH-------------------------SILTKVAGTFGYLAPEYI-VTGRITAKVDVYSFGMILMDLIT------ 566 (631)
Q Consensus 519 ~~~~~~~-------------------------~~~~~~~gt~~Y~aPE~~-~~~~~~~k~DVwS~GvvL~Ellt------ 566 (631)
....... ...+..+||+.|+|||++ ....|+.++|||||||++|||+|
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg~~~~~ 285 (458)
T 3rp9_A 206 VDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKENV 285 (458)
T ss_dssp TTSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTTSTTTC
T ss_pred ccCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHhccccc
Confidence 6422110 123456899999999986 45679999999999999999999
Q ss_pred -----CCCCCCCCCCCh----------------HHHHHH---HH--------------------HhH------------h
Q 042825 567 -----GRKVVDATHSDP----------------EYIIHL---AT--------------------WFQ------------K 590 (631)
Q Consensus 567 -----G~~P~~~~~~~~----------------~~~~~l---~~--------------------~~~------------~ 590 (631)
|+++|.+..... .....+ .. +.. .
T Consensus 286 ~~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 365 (458)
T 3rp9_A 286 AYHADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEALEKEDAKRYIRIFPKREGTDLAER 365 (458)
T ss_dssp SSGGGCCCSCC--------------------CHHHHHHHHHHHHHHCCCCHHHHHTSSCHHHHHHHTTSCCCCCCCGGGG
T ss_pred cccccccccCCCCccccccccccccccccccccCCHHHHHHHHHHcCCCCHHHHhhcCCHHHHHHHHhcCCCCCCCHHHH
Confidence 666665432100 000000 00 000 0
Q ss_pred hhcCChhHHHHHHhhcCCChhhHHhHHHHHHH
Q 042825 591 MHKNHDTFQMAIDKTIQLDEENLANVSTVAEL 622 (631)
Q Consensus 591 ~~~~~~~l~~~id~~L~~d~~~r~~~~~vl~l 622 (631)
....+.++.+++.+||..||.+|+++.++++-
T Consensus 366 ~~~~s~~~~dLl~~mL~~dP~~R~t~~e~L~H 397 (458)
T 3rp9_A 366 FPASSADAIHLLKRMLVFNPNKRITINECLAH 397 (458)
T ss_dssp STTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred CCCCCHHHHHHHHHHhccCccccCCHHHHhcC
Confidence 01125678999999999999999999998763
|
| >3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=4.6e-23 Score=212.71 Aligned_cols=204 Identities=20% Similarity=0.287 Sum_probs=141.6
Q ss_pred hcCCcccceeecCCCceEEEEEEe-cCCcEEEEEEEecCCC-CHHHHHHHHHHHHHHhc---------------------
Q 042825 416 ATNNFSEENRLGRGGVGTVYKGEL-KDGTEVGVKRMELGSV-TEQGIAQFESEITVLTK--------------------- 472 (631)
Q Consensus 416 ~t~~f~~~~~iG~G~fg~Vyk~~~-~~g~~vAvK~l~~~~~-~~~~~~~~~~Ei~~l~~--------------------- 472 (631)
..++|...+.||+|+||.||+|+. .+++.||||++..... ......++.+|++++.+
T Consensus 10 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~ 89 (311)
T 3ork_A 10 LSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGP 89 (311)
T ss_dssp ETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEE
T ss_pred ecCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCc
Confidence 356899999999999999999996 4689999999976543 33456678999988765
Q ss_pred -----------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeecccc
Q 042825 473 -----------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVR 517 (631)
Q Consensus 473 -----------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~ 517 (631)
|+|.+++.. ...+++.....++.+++.+ +.+||+|||+++
T Consensus 90 ~~~lv~e~~~g~~L~~~l~~-----~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~ 164 (311)
T 3ork_A 90 LPYIVMEYVDGVTLRDIVHT-----EGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIAR 164 (311)
T ss_dssp EEEEEEECCCEEEHHHHHHH-----HCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEETTSCEEECCCSCC-
T ss_pred ccEEEEecCCCCCHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEcCCCCEEEeeccCcc
Confidence 344444432 1357888888888888765 567899999998
Q ss_pred ccCCCCcc-ccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHh----Hhhh
Q 042825 518 LVPENGKH-SILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWF----QKMH 592 (631)
Q Consensus 518 ~~~~~~~~-~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~----~~~~ 592 (631)
........ .......||+.|+|||++.+..++.++|||||||++|||+||+.||.+............... ....
T Consensus 165 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (311)
T 3ork_A 165 AIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHE 244 (311)
T ss_dssp -----------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCCCCCHHHHST
T ss_pred cccccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCcccccC
Confidence 76432211 223346799999999999999999999999999999999999999986543211111111100 0011
Q ss_pred cCChhHHHHHHhhcCCChhhHHhHHHHHHHHH
Q 042825 593 KNHDTFQMAIDKTIQLDEENLANVSTVAELGD 624 (631)
Q Consensus 593 ~~~~~l~~~id~~L~~d~~~r~~~~~vl~lal 624 (631)
..+.++.+++.+||..||.+|++..++++-.+
T Consensus 245 ~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l 276 (311)
T 3ork_A 245 GLSADLDAVVLKALAKNPENRYQTAAEMRADL 276 (311)
T ss_dssp TCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHH
T ss_pred CCCHHHHHHHHHHHhcCHhhChhhHHHHHHHH
Confidence 23567999999999999999998777665544
|
| >2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=6e-23 Score=207.99 Aligned_cols=201 Identities=21% Similarity=0.292 Sum_probs=149.4
Q ss_pred cCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc-----------------------
Q 042825 417 TNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK----------------------- 472 (631)
Q Consensus 417 t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~----------------------- 472 (631)
.++|+..+.||+|+||.||+|+.. +|+.||+|++..........+.+.+|++++.+
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 84 (279)
T 2w5a_A 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYI 84 (279)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEE
T ss_pred hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEE
Confidence 467899999999999999999976 68999999998776666677889999998875
Q ss_pred -------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC-----------------------------CCcEEEeeccc
Q 042825 473 -------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG-----------------------------DDMRVADFGLV 516 (631)
Q Consensus 473 -------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g-----------------------------~~~kl~DFGla 516 (631)
++|.+++.... .....+++.....|+.+++.| +.+||+|||++
T Consensus 85 v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~~ 163 (279)
T 2w5a_A 85 VMEYCEGGDLASVITKGT-KERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLA 163 (279)
T ss_dssp EEECCTTEEHHHHHHHHH-HTTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEECSSSCEEECCCCHH
T ss_pred EEeCCCCCCHHHHHHhhc-ccCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEEcCCCCEEEecCchh
Confidence 46666664321 223458888888887776543 45789999999
Q ss_pred cccCCCCccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHhH--hhhcC
Q 042825 517 RLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQ--KMHKN 594 (631)
Q Consensus 517 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~~--~~~~~ 594 (631)
+...... .......||..|+|||.+.+..++.++||||||+++|||++|+.||....... ....+..... .....
T Consensus 164 ~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-~~~~i~~~~~~~~~~~~ 240 (279)
T 2w5a_A 164 RILNHDT--SFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKE-LAGKIREGKFRRIPYRY 240 (279)
T ss_dssp HHC---C--HHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHTCCCCCCTTS
T ss_pred eeecccc--ccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCHHH-HHHHHhhcccccCCccc
Confidence 8764221 12234578999999999998899999999999999999999999998653211 1111111110 01123
Q ss_pred ChhHHHHHHhhcCCChhhHHhHHHHHH
Q 042825 595 HDTFQMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 595 ~~~l~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
++++.+++.+|+..||.+|+++.++++
T Consensus 241 ~~~l~~li~~~l~~~p~~Rps~~~ll~ 267 (279)
T 2w5a_A 241 SDELNEIITRMLNLKDYHRPSVEEILE 267 (279)
T ss_dssp CHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred CHHHHHHHHHHcCCCcccCCCHHHHHh
Confidence 568999999999999999999999876
|
| >3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=2.1e-23 Score=223.28 Aligned_cols=204 Identities=18% Similarity=0.183 Sum_probs=146.9
Q ss_pred HHHHHhhcCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCC-HHHHHHHHHHHHHHhc---------------
Q 042825 410 IQVLRNATNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVT-EQGIAQFESEITVLTK--------------- 472 (631)
Q Consensus 410 ~~~l~~~t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~-~~~~~~~~~Ei~~l~~--------------- 472 (631)
+.+++...++|+..+.||+|+||+||+|+.+ +++.||+|++...... ....+.+.+|+.++..
T Consensus 61 ~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~ 140 (410)
T 3v8s_A 61 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQD 140 (410)
T ss_dssp HHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred HHhcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEE
Confidence 4455667789999999999999999999976 5899999999752110 0112346778887765
Q ss_pred -------------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeecc
Q 042825 473 -------------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGL 515 (631)
Q Consensus 473 -------------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGl 515 (631)
|+|.+++.. ..+++.....++.+++.| +.+||+|||+
T Consensus 141 ~~~~~lV~E~~~gg~L~~~l~~------~~~~e~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl~~~g~ikL~DFG~ 214 (410)
T 3v8s_A 141 DRYLYMVMEYMPGGDLVNLMSN------YDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGT 214 (410)
T ss_dssp SSEEEEEECCCTTEEHHHHHHH------CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTT
T ss_pred CCEEEEEEeCCCCCcHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeeECCCCCEEEeccce
Confidence 566666532 246777777777776655 5689999999
Q ss_pred ccccCCCCccccccccccCcccccccccccCC----CCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHhHh-
Q 042825 516 VRLVPENGKHSILTKVAGTFGYLAPEYIVTGR----ITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQK- 590 (631)
Q Consensus 516 a~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~----~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~~~- 590 (631)
++...... .......+||+.|+|||++.+.. |+.++|||||||++|||++|+.||.+..... ....+..+...
T Consensus 215 a~~~~~~~-~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~-~~~~i~~~~~~~ 292 (410)
T 3v8s_A 215 CMKMNKEG-MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVG-TYSKIMNHKNSL 292 (410)
T ss_dssp CEECCTTS-EEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHHH-HHHHHHTHHHHC
T ss_pred eEeeccCC-cccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChhh-HHHHHHhccccc
Confidence 98764222 22334678999999999997665 8899999999999999999999998654322 12222222111
Q ss_pred hh----cCChhHHHHHHhhcCCChhh--HHhHHHHHH
Q 042825 591 MH----KNHDTFQMAIDKTIQLDEEN--LANVSTVAE 621 (631)
Q Consensus 591 ~~----~~~~~l~~~id~~L~~d~~~--r~~~~~vl~ 621 (631)
.. ..+.+++++|.++|..+|.. |+++.++++
T Consensus 293 ~~p~~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~ 329 (410)
T 3v8s_A 293 TFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKR 329 (410)
T ss_dssp CCCTTCCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHT
T ss_pred cCCCcccccHHHHHHHHHHccChhhhCCCCCHHHHhc
Confidence 11 23578999999999877776 888888765
|
| >3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.88 E-value=1.9e-23 Score=220.59 Aligned_cols=197 Identities=12% Similarity=0.149 Sum_probs=141.4
Q ss_pred hhcCCcccceeecCCCceEEEEEE------ecCCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc----------------
Q 042825 415 NATNNFSEENRLGRGGVGTVYKGE------LKDGTEVGVKRMELGSVTEQGIAQFESEITVLTK---------------- 472 (631)
Q Consensus 415 ~~t~~f~~~~~iG~G~fg~Vyk~~------~~~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~---------------- 472 (631)
...++|...+.||+|+||+||+|+ ..+++.||||++.... ..++.+|++++.+
T Consensus 62 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-----~~~~~~e~~~~~~l~~~~~~~iv~~~~~~ 136 (365)
T 3e7e_A 62 LGSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPAN-----PWEFYIGTQLMERLKPSMQHMFMKFYSAH 136 (365)
T ss_dssp CSSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSCC-----HHHHHHHHHHHHHSCGGGGGGBCCEEEEE
T ss_pred ECCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCC-----hhHHHHHHHHHHHhhhhhhhhhhhhheee
Confidence 345789999999999999999994 3468899999997542 2455666655543
Q ss_pred ---------------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC--------------------------------
Q 042825 473 ---------------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG-------------------------------- 505 (631)
Q Consensus 473 ---------------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g-------------------------------- 505 (631)
|+|.+++..+.......++|.....|+.++++|
T Consensus 137 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~ivHrDiKp~NIll~~~~~~~~~~~ 216 (365)
T 3e7e_A 137 LFQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCEIIHGDIKPDNFILGNGFLEQDDED 216 (365)
T ss_dssp ECSSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECGGGTCC----
T ss_pred ecCCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEecccccCccccc
Confidence 788888876444345679999999999988876
Q ss_pred ---CCcEEEeeccccccCCCCccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHH
Q 042825 506 ---DDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYII 582 (631)
Q Consensus 506 ---~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~ 582 (631)
+.+||+|||+|+.+............+||++|+|||++.+..++.++|||||||++|||+||+.||........
T Consensus 217 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~--- 293 (365)
T 3e7e_A 217 DLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGEC--- 293 (365)
T ss_dssp --CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTEE---
T ss_pred cccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCCce---
Confidence 24789999999865422233345667899999999999999999999999999999999999999864322100
Q ss_pred HHHHHhHhhhcCChhHHHHHHhhcCCChhhH-HhHHHHH
Q 042825 583 HLATWFQKMHKNHDTFQMAIDKTIQLDEENL-ANVSTVA 620 (631)
Q Consensus 583 ~l~~~~~~~~~~~~~l~~~id~~L~~d~~~r-~~~~~vl 620 (631)
.+....+. ....+.+.++++.++..+|.+| +.+.++.
T Consensus 294 ~~~~~~~~-~~~~~~~~~~~~~~l~~~p~~r~~~~~~l~ 331 (365)
T 3e7e_A 294 KPEGLFRR-LPHLDMWNEFFHVMLNIPDCHHLPSLDLLR 331 (365)
T ss_dssp EECSCCTT-CSSHHHHHHHHHHHHCCCCTTCCCCHHHHH
T ss_pred eechhccc-cCcHHHHHHHHHHHcCCCCCCcchHHHHHH
Confidence 00000011 1223567889999998888776 3444433
|
| >3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A | Back alignment and structure |
|---|
Probab=99.88 E-value=9.3e-23 Score=207.13 Aligned_cols=203 Identities=18% Similarity=0.273 Sum_probs=149.1
Q ss_pred hcCCcccceeecCCCceEEEEEEecCCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc-----------------------
Q 042825 416 ATNNFSEENRLGRGGVGTVYKGELKDGTEVGVKRMELGSVTEQGIAQFESEITVLTK----------------------- 472 (631)
Q Consensus 416 ~t~~f~~~~~iG~G~fg~Vyk~~~~~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~----------------------- 472 (631)
..++|...+.||+|+||+||+|...++..||||++...... .+++.+|++++.+
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~---~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 98 (283)
T 3gen_A 22 DPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMS---EDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIIT 98 (283)
T ss_dssp CGGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTSBC---HHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEE
T ss_pred CHHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCCC---HHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEE
Confidence 34578899999999999999999988889999999865433 3668899999876
Q ss_pred -----CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCC
Q 042825 473 -----GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENG 523 (631)
Q Consensus 473 -----gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~ 523 (631)
|+|.+++.. ....+++.....++.+++.+ +.+||+|||+++.....
T Consensus 99 e~~~~~~L~~~l~~----~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~- 173 (283)
T 3gen_A 99 EYMANGCLLNYLRE----MRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDD- 173 (283)
T ss_dssp CCCTTCBHHHHHHC----GGGCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCH-
T ss_pred eccCCCcHHHHHHH----hccCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCccceEEEcCCCCEEEcccccccccccc-
Confidence 556666542 12458888999998888765 46899999999876421
Q ss_pred ccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChHHHHHHHHHhHh--hhcCChhHHH
Q 042825 524 KHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT-GRKVVDATHSDPEYIIHLATWFQK--MHKNHDTFQM 600 (631)
Q Consensus 524 ~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~Ellt-G~~P~~~~~~~~~~~~~l~~~~~~--~~~~~~~l~~ 600 (631)
.........+|+.|+|||.+.+..++.++||||+|+++|||+| |+.||....... ....+...... ....++.+.+
T Consensus 174 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~ 252 (283)
T 3gen_A 174 EYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSE-TAEHIAQGLRLYRPHLASEKVYT 252 (283)
T ss_dssp HHHSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHHH-HHHHHHTTCCCCCCTTCCHHHHH
T ss_pred ccccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChhH-HHHHHhcccCCCCCCcCCHHHHH
Confidence 1122334567889999999998899999999999999999999 999998653221 11111111111 1112468999
Q ss_pred HHHhhcCCChhhHHhHHHHHHHHHhhh
Q 042825 601 AIDKTIQLDEENLANVSTVAELGDHCC 627 (631)
Q Consensus 601 ~id~~L~~d~~~r~~~~~vl~lal~C~ 627 (631)
++..|+..+|.+|+++.++++....-.
T Consensus 253 li~~~l~~~p~~Rps~~~ll~~L~~~~ 279 (283)
T 3gen_A 253 IMYSCWHEKADERPTFKILLSNILDVM 279 (283)
T ss_dssp HHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHHccCChhHCcCHHHHHHHHHHHh
Confidence 999999999999999999987655433
|
| >2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... | Back alignment and structure |
|---|
Probab=99.88 E-value=1.7e-22 Score=208.40 Aligned_cols=219 Identities=20% Similarity=0.259 Sum_probs=159.0
Q ss_pred cCHHHHHhhcCCcccceeecCCCceEEEEEEe------cCCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc---------
Q 042825 408 IPIQVLRNATNNFSEENRLGRGGVGTVYKGEL------KDGTEVGVKRMELGSVTEQGIAQFESEITVLTK--------- 472 (631)
Q Consensus 408 ~~~~~l~~~t~~f~~~~~iG~G~fg~Vyk~~~------~~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~--------- 472 (631)
+...+..-..++|...+.||+|+||+||+|+. .+++.||||++.... .....+.+.+|++++.+
T Consensus 17 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~hp~iv~ 95 (316)
T 2xir_A 17 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA-THSEHRALMSELKILIHIGHHLNVVN 95 (316)
T ss_dssp CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC-CHHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred ccccceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCC-CcHHHHHHHHHHHHHHhcccCCCeee
Confidence 34455555678999999999999999999984 246899999997653 34456788999988764
Q ss_pred ---------------------CChhHHhHhhhhc-----------CCCCCCHHHHHHHHHHhhcC---------------
Q 042825 473 ---------------------GTLGRHLFNWEEE-----------GLEPLEWNTRLNIALDVARG--------------- 505 (631)
Q Consensus 473 ---------------------gsL~~~L~~~~~~-----------~~~~L~~~~~~~I~~~ia~g--------------- 505 (631)
|+|.+++...... ....+++.....++.+++.|
T Consensus 96 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dik 175 (316)
T 2xir_A 96 LLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLA 175 (316)
T ss_dssp EEEEECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHTTCCCSCCS
T ss_pred EEEEEecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhCCcccccCc
Confidence 3555555421110 01227888888888888776
Q ss_pred ---------CCcEEEeeccccccCCCCccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCC
Q 042825 506 ---------DDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT-GRKVVDATH 575 (631)
Q Consensus 506 ---------~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~Ellt-G~~P~~~~~ 575 (631)
+.+||+|||+++...............||+.|+|||++.+..++.++|||||||++|||+| |+.||....
T Consensus 176 p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~ 255 (316)
T 2xir_A 176 ARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVK 255 (316)
T ss_dssp GGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC
T ss_pred cceEEECCCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcccc
Confidence 4578999999987643333233345678999999999999999999999999999999998 999998765
Q ss_pred CChHHHHHHHHHhHh--hhcCChhHHHHHHhhcCCChhhHHhHHHHHHHHHhhh
Q 042825 576 SDPEYIIHLATWFQK--MHKNHDTFQMAIDKTIQLDEENLANVSTVAELGDHCC 627 (631)
Q Consensus 576 ~~~~~~~~l~~~~~~--~~~~~~~l~~~id~~L~~d~~~r~~~~~vl~lal~C~ 627 (631)
........+..-... ....+.++.+++..|+..||.+|+++.++++......
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~ 309 (316)
T 2xir_A 256 IDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLL 309 (316)
T ss_dssp CSHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred hhHHHHHHhccCccCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 543322222221111 1123468999999999999999999999987654433
|
| >1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.88 E-value=1e-22 Score=212.95 Aligned_cols=210 Identities=20% Similarity=0.319 Sum_probs=152.1
Q ss_pred hcCCcccceeecCCCceEEEEEEec------CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc-----------------
Q 042825 416 ATNNFSEENRLGRGGVGTVYKGELK------DGTEVGVKRMELGSVTEQGIAQFESEITVLTK----------------- 472 (631)
Q Consensus 416 ~t~~f~~~~~iG~G~fg~Vyk~~~~------~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~----------------- 472 (631)
..++|...+.||+|+||.||+|+.. ++..||||++.... .....+.+.+|+.++.+
T Consensus 43 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~ 121 (344)
T 1rjb_A 43 PRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKA-DSSEREALMSELKMMTQLGSHENIVNLLGACTLS 121 (344)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC-------CHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred CHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEeccccc-CHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeC
Confidence 4578999999999999999999862 46689999997542 23345678899888764
Q ss_pred ------------CChhHHhHhhhhc------------------CCCCCCHHHHHHHHHHhhcC-----------------
Q 042825 473 ------------GTLGRHLFNWEEE------------------GLEPLEWNTRLNIALDVARG----------------- 505 (631)
Q Consensus 473 ------------gsL~~~L~~~~~~------------------~~~~L~~~~~~~I~~~ia~g----------------- 505 (631)
|+|.+++...... ....+++.....++.+++.|
T Consensus 122 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~ 201 (344)
T 1rjb_A 122 GPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAAR 201 (344)
T ss_dssp SSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTTEEETTCSGG
T ss_pred CccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChh
Confidence 5777777542110 11347899999999888876
Q ss_pred -------CCcEEEeeccccccCCCCccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCC
Q 042825 506 -------DDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT-GRKVVDATHSD 577 (631)
Q Consensus 506 -------~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~Ellt-G~~P~~~~~~~ 577 (631)
+.+||+|||+++...............||+.|+|||.+.+..++.++|||||||++|||+| |+.||.+....
T Consensus 202 NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~ 281 (344)
T 1rjb_A 202 NVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVD 281 (344)
T ss_dssp GEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCS
T ss_pred hEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccCCcH
Confidence 4578999999987653333233345668899999999998899999999999999999998 99999876554
Q ss_pred hHHHHHHHHHhHh--hhcCChhHHHHHHhhcCCChhhHHhHHHHHHHHHhh
Q 042825 578 PEYIIHLATWFQK--MHKNHDTFQMAIDKTIQLDEENLANVSTVAELGDHC 626 (631)
Q Consensus 578 ~~~~~~l~~~~~~--~~~~~~~l~~~id~~L~~d~~~r~~~~~vl~lal~C 626 (631)
......+...... ....++++.+++..|+..||.+||++.++++.....
T Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~ 332 (344)
T 1rjb_A 282 ANFYKLIQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQ 332 (344)
T ss_dssp HHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred HHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHH
Confidence 3222222211111 112356899999999999999999999998765443
|
| >3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A | Back alignment and structure |
|---|
Probab=99.88 E-value=3.5e-23 Score=217.48 Aligned_cols=200 Identities=14% Similarity=0.183 Sum_probs=147.7
Q ss_pred CCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCC---CHHHHHHHHHHHHHHhc---------------------
Q 042825 418 NNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSV---TEQGIAQFESEITVLTK--------------------- 472 (631)
Q Consensus 418 ~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~---~~~~~~~~~~Ei~~l~~--------------------- 472 (631)
+.|+..+.||+|+||+||+|+.+ +|+.||||++..... .....+.+.+|++++.+
T Consensus 24 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~l 103 (351)
T 3c0i_A 24 DVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYM 103 (351)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred cceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEE
Confidence 46889999999999999999975 589999999964211 11135678999998875
Q ss_pred -------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC---------------------------CCcEEEeeccccc
Q 042825 473 -------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG---------------------------DDMRVADFGLVRL 518 (631)
Q Consensus 473 -------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g---------------------------~~~kl~DFGla~~ 518 (631)
|+|.+++.... .....+++.....++.+++.| ..+||+|||+++.
T Consensus 104 v~e~~~g~~L~~~l~~~~-~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a~~ 182 (351)
T 3c0i_A 104 VFEFMDGADLCFEIVKRA-DAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQ 182 (351)
T ss_dssp EEECCSSCBHHHHHHHHH-HTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECSSSTTCCEEECCCTTCEE
T ss_pred EEeCCCCCCHHHHHHHhc-ccCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCChHHeEEecCCCCCcEEEecCcceeE
Confidence 56666664322 223457888888888887765 1289999999987
Q ss_pred cCCCCccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHh-----Hhhhc
Q 042825 519 VPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWF-----QKMHK 593 (631)
Q Consensus 519 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~-----~~~~~ 593 (631)
.... .......+||+.|+|||++.+..++.++||||+||++|||++|+.||.+.. ......+.... .....
T Consensus 183 ~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~--~~~~~~i~~~~~~~~~~~~~~ 258 (351)
T 3c0i_A 183 LGES--GLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTK--ERLFEGIIKGKYKMNPRQWSH 258 (351)
T ss_dssp CCTT--SCBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSH--HHHHHHHHHTCCCCCHHHHTT
T ss_pred ecCC--CeeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcH--HHHHHHHHcCCCCCCcccccc
Confidence 7432 222345689999999999998899999999999999999999999998632 11111111110 01122
Q ss_pred CChhHHHHHHhhcCCChhhHHhHHHHHHH
Q 042825 594 NHDTFQMAIDKTIQLDEENLANVSTVAEL 622 (631)
Q Consensus 594 ~~~~l~~~id~~L~~d~~~r~~~~~vl~l 622 (631)
.++++.+++.++|..||.+|+++.++++-
T Consensus 259 ~s~~~~~li~~~L~~dP~~R~s~~e~l~h 287 (351)
T 3c0i_A 259 ISESAKDLVRRMLMLDPAERITVYEALNH 287 (351)
T ss_dssp SCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred CCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 35789999999999999999999998753
|
| >3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=3.8e-23 Score=215.20 Aligned_cols=200 Identities=17% Similarity=0.242 Sum_probs=138.3
Q ss_pred HhhcCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc--------------------
Q 042825 414 RNATNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK-------------------- 472 (631)
Q Consensus 414 ~~~t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~-------------------- 472 (631)
....++|...+.||+|+||+||+|+.. +++.||||++..........+.+.+|++++.+
T Consensus 30 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 109 (329)
T 3gbz_A 30 ATSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLH 109 (329)
T ss_dssp --CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEE
T ss_pred ccchhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEE
Confidence 345678999999999999999999865 68999999997655444455678899999876
Q ss_pred -------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------C-----CcEEEeeccc
Q 042825 473 -------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------D-----DMRVADFGLV 516 (631)
Q Consensus 473 -------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~-----~~kl~DFGla 516 (631)
|+|.+++.. ...+++.....|+.+++.| + .+||+|||++
T Consensus 110 lv~e~~~~~L~~~~~~-----~~~~~~~~~~~i~~ql~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a 184 (329)
T 3gbz_A 110 LIFEYAENDLKKYMDK-----NPDVSMRVIKSFLYQLINGVNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLA 184 (329)
T ss_dssp EEEECCSEEHHHHHHH-----CTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEC-----CCEEEECCTTHH
T ss_pred EEEecCCCCHHHHHhh-----cCCCCHHHHHHHHHHHHHHHHHHHhCCEECCCCCHHHEEEecCCCCccceEEECcCCCc
Confidence 445555432 2357888888888888766 1 2789999999
Q ss_pred cccCCCCccccccccccCcccccccccccC-CCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHhH------
Q 042825 517 RLVPENGKHSILTKVAGTFGYLAPEYIVTG-RITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQ------ 589 (631)
Q Consensus 517 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~~------ 589 (631)
+..... ........||+.|+|||++.+. .++.++|||||||++|||++|+.||....... ....+.....
T Consensus 185 ~~~~~~--~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~ 261 (329)
T 3gbz_A 185 RAFGIP--IRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEID-QLFKIFEVLGLPDDTT 261 (329)
T ss_dssp HHHC-------------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHHHCCCCTTT
T ss_pred cccCCc--ccccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHH-HHHHHHHHhCCCchhh
Confidence 876422 1223456789999999999875 48999999999999999999999998653221 1111111100
Q ss_pred -----------------------h--hhcCChhHHHHHHhhcCCChhhHHhHHHHHH
Q 042825 590 -----------------------K--MHKNHDTFQMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 590 -----------------------~--~~~~~~~l~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
. ....++++.+++.+||..||.+|+++.++++
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 318 (329)
T 3gbz_A 262 WPGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALE 318 (329)
T ss_dssp STTGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred hhhhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhC
Confidence 0 0003467889999999999999999998875
|
| >2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=4.3e-22 Score=205.08 Aligned_cols=203 Identities=20% Similarity=0.336 Sum_probs=141.1
Q ss_pred hcCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCC-CCHHHHHHHHHHHHHHhc---------------------
Q 042825 416 ATNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGS-VTEQGIAQFESEITVLTK--------------------- 472 (631)
Q Consensus 416 ~t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~-~~~~~~~~~~~Ei~~l~~--------------------- 472 (631)
..++|...+.||+|+||.||+|+.. +|+.||||++.... ......+++.+|++++.+
T Consensus 30 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~l 109 (310)
T 2wqm_A 30 TLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNI 109 (310)
T ss_dssp SGGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEE
T ss_pred cccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEE
Confidence 3457899999999999999999964 68999999997643 234566789999999876
Q ss_pred -------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCC
Q 042825 473 -------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPE 521 (631)
Q Consensus 473 -------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~ 521 (631)
|+|.+++.... .....+++.....++.+++.| +.+||+|||+++....
T Consensus 110 v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~~ 188 (310)
T 2wqm_A 110 VLELADAGDLSRMIKHFK-KQKRLIPERTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSS 188 (310)
T ss_dssp EEECCCSCBHHHHHHHHH-HTTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCC--------
T ss_pred EEecCCCCCHHHHHHHhc-ccccCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCcHHHEEEcCCCCEEEEeccceeeecC
Confidence 57777775432 234568888888888888776 4678999999987642
Q ss_pred CCccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHhHh-h------hcC
Q 042825 522 NGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQK-M------HKN 594 (631)
Q Consensus 522 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~~~-~------~~~ 594 (631)
. ........|+..|+|||++.+..++.++|||||||++|||++|+.||.+....... +...... . ...
T Consensus 189 ~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~---~~~~~~~~~~~~~~~~~~ 263 (310)
T 2wqm_A 189 K--TTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYS---LCKKIEQCDYPPLPSDHY 263 (310)
T ss_dssp ------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CCHHH---HHHHHHTTCSCCCCTTTS
T ss_pred C--CccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchhHHH---HHHHhhcccCCCCccccc
Confidence 2 12233457999999999999889999999999999999999999999765433211 1111111 0 112
Q ss_pred ChhHHHHHHhhcCCChhhHHhHHHHHHHHH
Q 042825 595 HDTFQMAIDKTIQLDEENLANVSTVAELGD 624 (631)
Q Consensus 595 ~~~l~~~id~~L~~d~~~r~~~~~vl~lal 624 (631)
++++.+++..|+..||.+|+++.++++...
T Consensus 264 ~~~l~~li~~~l~~dp~~Rps~~~il~~l~ 293 (310)
T 2wqm_A 264 SEELRQLVNMCINPDPEKRPDVTYVYDVAK 293 (310)
T ss_dssp CHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CHHHHHHHHHHcCCChhhCCCHHHHHHHHH
Confidence 467999999999999999999999887653
|
| >4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=2.2e-23 Score=226.35 Aligned_cols=199 Identities=18% Similarity=0.262 Sum_probs=136.4
Q ss_pred hcCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCC-CHHHHHHHHHHHHHHhc---------------------
Q 042825 416 ATNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSV-TEQGIAQFESEITVLTK--------------------- 472 (631)
Q Consensus 416 ~t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~-~~~~~~~~~~Ei~~l~~--------------------- 472 (631)
..++|+..+.||+|+||.||+|+.. +|+.||||++..... .......+.+|++++.+
T Consensus 146 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~l 225 (446)
T 4ejn_A 146 TMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCF 225 (446)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEE
T ss_pred ChHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEE
Confidence 3467999999999999999999965 589999999975321 22334567888887765
Q ss_pred -------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC-------------------------CCcEEEeeccccccC
Q 042825 473 -------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG-------------------------DDMRVADFGLVRLVP 520 (631)
Q Consensus 473 -------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g-------------------------~~~kl~DFGla~~~~ 520 (631)
|+|..++.. ...+++.....++.+++.| +.+||+|||+|+...
T Consensus 226 v~e~~~~~~L~~~l~~-----~~~~~~~~~~~~~~qi~~aL~~LH~~~giiHrDlkp~NIll~~~~~~kl~DFG~a~~~~ 300 (446)
T 4ejn_A 226 VMEYANGGELFFHLSR-----ERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGI 300 (446)
T ss_dssp EECCCSSCBHHHHHHH-----HSCCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCCCGGGEEECSSSCEEECCCCCCCTTC
T ss_pred EEeeCCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHhhcCCEEECCCCHHHEEECCCCCEEEccCCCceecc
Confidence 566666542 1357777777777666544 567999999998653
Q ss_pred CCCccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHhHhhhcCChhHHH
Q 042825 521 ENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQKMHKNHDTFQM 600 (631)
Q Consensus 521 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~ 600 (631)
.. .......+||+.|+|||++.+..++.++|||||||++|||++|+.||.......................++++.+
T Consensus 301 ~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~ 378 (446)
T 4ejn_A 301 KD--GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLGPEAKS 378 (446)
T ss_dssp C-------CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCTTSCHHHHH
T ss_pred CC--CcccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHHhCCCCCCccCCHHHHH
Confidence 22 2234567899999999999999999999999999999999999999976432211111111111111123578999
Q ss_pred HHHhhcCCChhhHH-----hHHHHHH
Q 042825 601 AIDKTIQLDEENLA-----NVSTVAE 621 (631)
Q Consensus 601 ~id~~L~~d~~~r~-----~~~~vl~ 621 (631)
+|.++|..||.+|+ ++.++++
T Consensus 379 li~~~L~~dP~~R~~~~~~t~~ell~ 404 (446)
T 4ejn_A 379 LLSGLLKKDPKQRLGGGSEDAKEIMQ 404 (446)
T ss_dssp HHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred HHHHHcccCHHHhCCCCCCCHHHHHh
Confidence 99999999999998 8888765
|
| >4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.88 E-value=2.2e-22 Score=207.21 Aligned_cols=197 Identities=16% Similarity=0.216 Sum_probs=140.0
Q ss_pred cCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc-----------------------
Q 042825 417 TNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK----------------------- 472 (631)
Q Consensus 417 t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~----------------------- 472 (631)
.++|...+.||+|+||+||+|+.. +|+.||||++..........+.+.+|++++.+
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 81 (311)
T 4agu_A 2 MEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVF 81 (311)
T ss_dssp -CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred cccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEE
Confidence 367999999999999999999976 48999999997765555556778899999876
Q ss_pred -----CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCC
Q 042825 473 -----GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENG 523 (631)
Q Consensus 473 -----gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~ 523 (631)
+++..++ .....+++.....++.+++.| +.+||+|||+++.....
T Consensus 82 e~~~~~~l~~~~-----~~~~~~~~~~~~~i~~~l~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~- 155 (311)
T 4agu_A 82 EYCDHTVLHELD-----RYQRGVPEHLVKSITWQTLQAVNFCHKHNCIHRDVKPENILITKHSVIKLCDFGFARLLTGP- 155 (311)
T ss_dssp ECCSEEHHHHHH-----HTSSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECC---
T ss_pred EeCCCchHHHHH-----hhhcCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCChhhEEEcCCCCEEEeeCCCchhccCc-
Confidence 2222222 123458888888888887765 56789999999876422
Q ss_pred ccccccccccCccccccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHhH-------------
Q 042825 524 KHSILTKVAGTFGYLAPEYIVT-GRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQ------------- 589 (631)
Q Consensus 524 ~~~~~~~~~gt~~Y~aPE~~~~-~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~~------------- 589 (631)
........||..|+|||++.+ ..++.++||||+||++|||++|+.||.+....+ ....+.....
T Consensus 156 -~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 233 (311)
T 4agu_A 156 -SDYYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVD-QLYLIRKTLGDLIPRHQQVFSTN 233 (311)
T ss_dssp -----------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCSCCHHHHHHHHTC
T ss_pred -ccccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHhcccccccccccccc
Confidence 222345679999999999876 568999999999999999999999998653321 1111111100
Q ss_pred -------------------hhhcCChhHHHHHHhhcCCChhhHHhHHHHHH
Q 042825 590 -------------------KMHKNHDTFQMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 590 -------------------~~~~~~~~l~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
.....+.++.+++.+||..||.+|+++.++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 284 (311)
T 4agu_A 234 QYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLH 284 (311)
T ss_dssp GGGTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHT
T ss_pred cccccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhc
Confidence 00123456889999999999999999998875
|
| >4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.88 E-value=6.3e-23 Score=212.37 Aligned_cols=201 Identities=19% Similarity=0.213 Sum_probs=146.2
Q ss_pred cCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc-----------------------
Q 042825 417 TNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK----------------------- 472 (631)
Q Consensus 417 t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~----------------------- 472 (631)
.++|...+.||+|+||+||+|+.. +|+.||||++..... ....+.+.+|++++.+
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 86 (319)
T 4euu_A 8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISF-LRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVL 86 (319)
T ss_dssp SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGG-GSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEE
T ss_pred CCCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccc-cchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEE
Confidence 356889999999999999999976 489999999975432 2235678899988876
Q ss_pred -------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC----------------------------CCcEEEeecccc
Q 042825 473 -------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG----------------------------DDMRVADFGLVR 517 (631)
Q Consensus 473 -------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g----------------------------~~~kl~DFGla~ 517 (631)
|+|.+++... .....+++.....|+.+++.| ..+||+|||+++
T Consensus 87 v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~ 164 (319)
T 4euu_A 87 IMEFCPCGSLYTVLEEP--SNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAR 164 (319)
T ss_dssp EEECCTTCBHHHHHHSG--GGTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEECTTSCEEEEECCCTTCE
T ss_pred EEeCCCCCCHHHHHHHh--ccccCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEeccCCCCceEEEccCCCce
Confidence 4555555431 112348999999999888876 126899999998
Q ss_pred ccCCCCccccccccccCcccccccccc--------cCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHhH
Q 042825 518 LVPENGKHSILTKVAGTFGYLAPEYIV--------TGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQ 589 (631)
Q Consensus 518 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~--------~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~~ 589 (631)
...... ......||..|+|||++. +..++.++|||||||++|||+||+.||............+.....
T Consensus 165 ~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~ 241 (319)
T 4euu_A 165 ELEDDE---QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIIT 241 (319)
T ss_dssp ECCTTC---CBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHH
T ss_pred ecCCCC---ceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHhc
Confidence 764322 234567999999999986 467999999999999999999999999754332211112222211
Q ss_pred hhh-----------------------------cCChhHHHHHHhhcCCChhhHHhHHHHHHHH
Q 042825 590 KMH-----------------------------KNHDTFQMAIDKTIQLDEENLANVSTVAELG 623 (631)
Q Consensus 590 ~~~-----------------------------~~~~~l~~~id~~L~~d~~~r~~~~~vl~la 623 (631)
... .....+.+++.++|..||++|+++.++++-.
T Consensus 242 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~ 304 (319)
T 4euu_A 242 GKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAET 304 (319)
T ss_dssp HCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHH
T ss_pred CCCcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhcc
Confidence 110 0013678999999999999999999988643
|
| >2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.88 E-value=7.1e-23 Score=209.82 Aligned_cols=202 Identities=19% Similarity=0.275 Sum_probs=139.0
Q ss_pred cCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCH------------------------HHHHHHHHHHHHHh
Q 042825 417 TNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTE------------------------QGIAQFESEITVLT 471 (631)
Q Consensus 417 t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~------------------------~~~~~~~~Ei~~l~ 471 (631)
.++|...+.||+|+||.||+|+.. +++.||||++....... ...+++.+|++++.
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 91 (298)
T 2zv2_A 12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK 91 (298)
T ss_dssp ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence 468999999999999999999965 58999999997643211 12356889999988
Q ss_pred cCChhHH-----------------hHhhhh-------cCCCCCCHHHHHHHHHHhhcC----------------------
Q 042825 472 KGTLGRH-----------------LFNWEE-------EGLEPLEWNTRLNIALDVARG---------------------- 505 (631)
Q Consensus 472 ~gsL~~~-----------------L~~~~~-------~~~~~L~~~~~~~I~~~ia~g---------------------- 505 (631)
+-..... +.++.. .....+++.....++.+++.|
T Consensus 92 ~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~ 171 (298)
T 2zv2_A 92 KLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKPLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVG 171 (298)
T ss_dssp TCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCSSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEC
T ss_pred hCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEC
Confidence 7211000 001110 012458888888888888765
Q ss_pred --CCcEEEeeccccccCCCCccccccccccCcccccccccccCC---CCchhhHHHHHHHHHHHHcCCCCCCCCCCChHH
Q 042825 506 --DDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGR---ITAKVDVYSFGMILMDLITGRKVVDATHSDPEY 580 (631)
Q Consensus 506 --~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~---~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~ 580 (631)
+.+||+|||+++..... ........||+.|+|||.+.+.. ++.++|||||||++|||++|+.||....... .
T Consensus 172 ~~~~~kl~Dfg~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~-~ 248 (298)
T 2zv2_A 172 EDGHIKIADFGVSNEFKGS--DALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIMC-L 248 (298)
T ss_dssp TTSCEEECCCTTCEECSSS--SCEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSSHHH-H
T ss_pred CCCCEEEecCCCccccccc--cccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCccHHH-H
Confidence 56899999999876422 22234568999999999987655 4789999999999999999999997543211 1
Q ss_pred HHHHHHHhHh---hhcCChhHHHHHHhhcCCChhhHHhHHHHHH
Q 042825 581 IIHLATWFQK---MHKNHDTFQMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 581 ~~~l~~~~~~---~~~~~~~l~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
...+...... ....++++.+++.+||..||.+|+++.++++
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~ 292 (298)
T 2zv2_A 249 HSKIKSQALEFPDQPDIAEDLKDLITRMLDKNPESRIVVPEIKL 292 (298)
T ss_dssp HHHHHHCCCCCCSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred HHHHhcccCCCCCccccCHHHHHHHHHHhhcChhhCCCHHHHhc
Confidence 1111111000 0123468999999999999999999998765
|
| >3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=2.8e-23 Score=215.94 Aligned_cols=207 Identities=21% Similarity=0.265 Sum_probs=148.3
Q ss_pred cCHHHHHhhcCCcccc-eeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc-------------
Q 042825 408 IPIQVLRNATNNFSEE-NRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK------------- 472 (631)
Q Consensus 408 ~~~~~l~~~t~~f~~~-~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~------------- 472 (631)
+.+...+...+.|... +.||+|+||.||+|+.. +|+.||||++...........++.+|+.++.+
T Consensus 18 ~~~~~~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~ 97 (327)
T 3lm5_A 18 LYFQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEV 97 (327)
T ss_dssp CCSBCHHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEE
T ss_pred hHHHHHHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEE
Confidence 3344445566677776 89999999999999976 58999999998654444446778899888865
Q ss_pred ----------------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC---------------------------CCcE
Q 042825 473 ----------------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG---------------------------DDMR 509 (631)
Q Consensus 473 ----------------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g---------------------------~~~k 509 (631)
|+|.+++. ......+++.....++.+++.| +.+|
T Consensus 98 ~~~~~~~~lv~e~~~~~~L~~~~~---~~~~~~~~~~~~~~i~~ql~~~L~~LH~~givH~Dikp~NIl~~~~~~~~~~k 174 (327)
T 3lm5_A 98 YENTSEIILILEYAAGGEIFSLCL---PELAEMVSENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNILLSSIYPLGDIK 174 (327)
T ss_dssp EECSSEEEEEEECCTTEEGGGGGS---SCC-CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESCBTTBCCEE
T ss_pred EEeCCeEEEEEEecCCCcHHHHHH---HhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCcCChHHEEEecCCCCCcEE
Confidence 34444432 1223568898998888888765 3678
Q ss_pred EEeeccccccCCCCccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHhH
Q 042825 510 VADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQ 589 (631)
Q Consensus 510 l~DFGla~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~~ 589 (631)
|+|||+++..... .......||+.|+|||++.+..++.++||||+||++|||++|+.||....... ....+.....
T Consensus 175 L~Dfg~a~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~-~~~~i~~~~~ 250 (327)
T 3lm5_A 175 IVDFGMSRKIGHA---CELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQE-TYLNISQVNV 250 (327)
T ss_dssp ECCGGGCEEC------------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHTCC
T ss_pred EeeCccccccCCc---cccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchH-HHHHHHhccc
Confidence 9999999876422 12344679999999999999999999999999999999999999998643221 1111211110
Q ss_pred h-----hhcCChhHHHHHHhhcCCChhhHHhHHHHHH
Q 042825 590 K-----MHKNHDTFQMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 590 ~-----~~~~~~~l~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
. ....++.+.+++.++|..||.+|+++.++++
T Consensus 251 ~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~ 287 (327)
T 3lm5_A 251 DYSEETFSSVSQLATDFIQSLLVKNPEKRPTAEICLS 287 (327)
T ss_dssp CCCTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred ccCchhhcccCHHHHHHHHHHcCCChhhCcCHHHHhC
Confidence 0 1123467899999999999999999998865
|
| >3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=7.8e-23 Score=205.98 Aligned_cols=199 Identities=22% Similarity=0.291 Sum_probs=150.0
Q ss_pred cCCcccceeecCCCceEEEEEEecCCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc------------------------
Q 042825 417 TNNFSEENRLGRGGVGTVYKGELKDGTEVGVKRMELGSVTEQGIAQFESEITVLTK------------------------ 472 (631)
Q Consensus 417 t~~f~~~~~iG~G~fg~Vyk~~~~~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~------------------------ 472 (631)
.++|...+.||+|+||.||+|+.+++..||||++...... .+++.+|++++.+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~---~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 83 (268)
T 3sxs_A 7 REEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSMS---EDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTE 83 (268)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTTBC---HHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEE
T ss_pred hhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCCCc---HHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEE
Confidence 4578899999999999999999988889999999765433 3568899988876
Q ss_pred ----CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCCc
Q 042825 473 ----GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENGK 524 (631)
Q Consensus 473 ----gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~~ 524 (631)
++|.+++... ...+++.....++.+++.+ +.+||+|||+++......
T Consensus 84 ~~~~~~L~~~l~~~----~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~- 158 (268)
T 3sxs_A 84 YISNGCLLNYLRSH----GKGLEPSQLLEMCYDVCEGMAFLESHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQ- 158 (268)
T ss_dssp CCTTCBHHHHHHHH----GGGCCHHHHHHHHHHHHHHHHHHHHTTEEESSCSGGGEEECTTCCEEECCTTCEEECCTTC-
T ss_pred ccCCCcHHHHHHHc----CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCcceEEECCCCCEEEccCccceecchhh-
Confidence 5566666431 2358888999998888766 568899999998764322
Q ss_pred cccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChHHHHHHHHHhH--hhhcCChhHHHH
Q 042825 525 HSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT-GRKVVDATHSDPEYIIHLATWFQ--KMHKNHDTFQMA 601 (631)
Q Consensus 525 ~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~Ellt-G~~P~~~~~~~~~~~~~l~~~~~--~~~~~~~~l~~~ 601 (631)
........+|+.|+|||.+.+..++.++||||+|+++|||+| |+.||+...... ....+..... .....++++.++
T Consensus 159 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~l 237 (268)
T 3sxs_A 159 YVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSE-VVLKVSQGHRLYRPHLASDTIYQI 237 (268)
T ss_dssp EEECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHH-HHHHHHTTCCCCCCTTSCHHHHHH
T ss_pred hhcccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChHH-HHHHHHcCCCCCCCCcChHHHHHH
Confidence 222344567788999999988889999999999999999999 999998643221 1111111000 011124679999
Q ss_pred HHhhcCCChhhHHhHHHHHHHHH
Q 042825 602 IDKTIQLDEENLANVSTVAELGD 624 (631)
Q Consensus 602 id~~L~~d~~~r~~~~~vl~lal 624 (631)
+..|+..+|.+|+++.++++..-
T Consensus 238 i~~~l~~~p~~Rps~~~ll~~L~ 260 (268)
T 3sxs_A 238 MYSCWHELPEKRPTFQQLLSSIE 260 (268)
T ss_dssp HHHTTCSSGGGSCCHHHHHHHHG
T ss_pred HHHHcCCChhhCcCHHHHHHHHH
Confidence 99999999999999999988543
|
| >2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... | Back alignment and structure |
|---|
Probab=99.88 E-value=7.3e-23 Score=216.88 Aligned_cols=202 Identities=21% Similarity=0.314 Sum_probs=138.8
Q ss_pred CCcccceeecCCCceEEEEEEec----CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc---------------------
Q 042825 418 NNFSEENRLGRGGVGTVYKGELK----DGTEVGVKRMELGSVTEQGIAQFESEITVLTK--------------------- 472 (631)
Q Consensus 418 ~~f~~~~~iG~G~fg~Vyk~~~~----~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~--------------------- 472 (631)
++|...+.||+|+||.||+|+.. ++..||||+++... .....++|.+|++++.+
T Consensus 45 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 123 (373)
T 2qol_A 45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGY-TEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMI 123 (373)
T ss_dssp GGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTC-CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEE
T ss_pred hhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCcc-CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEE
Confidence 47888999999999999999865 47789999997643 45567789999999876
Q ss_pred -------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCC
Q 042825 473 -------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPE 521 (631)
Q Consensus 473 -------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~ 521 (631)
|+|.+++.. ....+++..+..|+.++++| +.+||+|||+++....
T Consensus 124 v~e~~~~~sL~~~l~~----~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 199 (373)
T 2qol_A 124 VTEYMENGSLDSFLRK----HDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLED 199 (373)
T ss_dssp EEECCTTCBHHHHHHT----TTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCC--------
T ss_pred EEeCCCCCcHHHHHHh----CCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEEcCCCCEEECcCcccccccc
Confidence 577776642 23468999999999988876 4678999999987643
Q ss_pred CCcc-ccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChHHHHHHHHHhH--hhhcCChh
Q 042825 522 NGKH-SILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT-GRKVVDATHSDPEYIIHLATWFQ--KMHKNHDT 597 (631)
Q Consensus 522 ~~~~-~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~Ellt-G~~P~~~~~~~~~~~~~l~~~~~--~~~~~~~~ 597 (631)
.... .......+|+.|+|||++.+..++.++|||||||++|||++ |+.||....... ....+....+ .....+..
T Consensus 200 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~~-~~~~i~~~~~~~~~~~~~~~ 278 (373)
T 2qol_A 200 DPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQD-VIKAVDEGYRLPPPMDCPAA 278 (373)
T ss_dssp --------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHHH-HHHHHHTTEECCCCTTCBHH
T ss_pred CCccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHHH-HHHHHHcCCCCCCCccccHH
Confidence 2211 11223346789999999999999999999999999999998 999997643211 1111111000 01122467
Q ss_pred HHHHHHhhcCCChhhHHhHHHHHHHHHh
Q 042825 598 FQMAIDKTIQLDEENLANVSTVAELGDH 625 (631)
Q Consensus 598 l~~~id~~L~~d~~~r~~~~~vl~lal~ 625 (631)
+.+++..|+..||.+||++.++++..-.
T Consensus 279 l~~li~~cl~~dp~~RPs~~~i~~~L~~ 306 (373)
T 2qol_A 279 LYQLMLDCWQKDRNNRPKFEQIVSILDK 306 (373)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred HHHHHHHHhCcChhhCcCHHHHHHHHHH
Confidence 8999999999999999999998876443
|
| >3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=2.5e-23 Score=220.87 Aligned_cols=197 Identities=22% Similarity=0.305 Sum_probs=148.7
Q ss_pred cCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc-----------------------
Q 042825 417 TNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK----------------------- 472 (631)
Q Consensus 417 t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~----------------------- 472 (631)
.++|...+.||+|+||.||+|++. +++.||||+++.. ......++|.+|++++.+
T Consensus 113 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 191 (377)
T 3cbl_A 113 HEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRET-LPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVM 191 (377)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTT-SCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEE
T ss_pred hHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEcccc-CCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEE
Confidence 457888999999999999999986 6899999998754 334455678999999876
Q ss_pred -----CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCC
Q 042825 473 -----GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENG 523 (631)
Q Consensus 473 -----gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~ 523 (631)
|+|.+++.. ....+++.....++.+++.| +.+||+|||+++......
T Consensus 192 e~~~~g~L~~~l~~----~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~ 267 (377)
T 3cbl_A 192 ELVQGGDFLTFLRT----EGARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGV 267 (377)
T ss_dssp ECCTTCBHHHHHHH----HGGGCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCGGGCEECTTSE
T ss_pred EcCCCCCHHHHHHh----cCCCCCHHHHHHHHHHHHHHHHHHHHCCcCCcccCHHHEEEcCCCcEEECcCCCceecCCCc
Confidence 667776643 12357888899999888876 567999999998753221
Q ss_pred ccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChHHHHHHHHHhHhh------hcCCh
Q 042825 524 KHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT-GRKVVDATHSDPEYIIHLATWFQKM------HKNHD 596 (631)
Q Consensus 524 ~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~Ellt-G~~P~~~~~~~~~~~~~l~~~~~~~------~~~~~ 596 (631)
.........+++.|+|||.+....++.++|||||||++|||+| |+.||...... . ....+... ...++
T Consensus 268 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~--~---~~~~~~~~~~~~~~~~~~~ 342 (377)
T 3cbl_A 268 YAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQ--Q---TREFVEKGGRLPCPELCPD 342 (377)
T ss_dssp EECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHH--H---HHHHHHTTCCCCCCTTCCH
T ss_pred eeecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH--H---HHHHHHcCCCCCCCCCCCH
Confidence 1111122346788999999998899999999999999999999 99999865322 1 11222111 11246
Q ss_pred hHHHHHHhhcCCChhhHHhHHHHHHHH
Q 042825 597 TFQMAIDKTIQLDEENLANVSTVAELG 623 (631)
Q Consensus 597 ~l~~~id~~L~~d~~~r~~~~~vl~la 623 (631)
++.+++.+|+..||.+||++.++++..
T Consensus 343 ~l~~li~~cl~~dP~~Rps~~~i~~~L 369 (377)
T 3cbl_A 343 AVFRLMEQCWAYEPGQRPSFSTIYQEL 369 (377)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred HHHHHHHHHcCCCchhCcCHHHHHHHH
Confidence 789999999999999999999987643
|
| >2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... | Back alignment and structure |
|---|
Probab=99.88 E-value=1.1e-22 Score=214.92 Aligned_cols=201 Identities=20% Similarity=0.272 Sum_probs=132.3
Q ss_pred hcCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhcCC----------------hhH-
Q 042825 416 ATNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTKGT----------------LGR- 477 (631)
Q Consensus 416 ~t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~gs----------------L~~- 477 (631)
..++|...+.||+|+||.||+|+.. +|+.||||++..........+++.+|++++.+-. +..
T Consensus 27 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~ 106 (367)
T 2fst_X 27 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF 106 (367)
T ss_dssp EETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGC
T ss_pred CCCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccC
Confidence 4578999999999999999999865 6899999999765555566778899999987611 000
Q ss_pred ---Hh-Hhhhhc------CCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCC
Q 042825 478 ---HL-FNWEEE------GLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENG 523 (631)
Q Consensus 478 ---~L-~~~~~~------~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~ 523 (631)
++ ..+... ....+++.+...++.++++| +.+||+|||+++....
T Consensus 107 ~~~~lv~e~~~~~L~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kL~DFG~a~~~~~-- 184 (367)
T 2fst_X 107 NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTAD-- 184 (367)
T ss_dssp CCCEEEEECCCEECC-----CCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECC-----------
T ss_pred CeEEEEecccCCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHhhEEECCCCCEEEeeccccccccc--
Confidence 00 000000 01358888888888888876 5689999999987532
Q ss_pred ccccccccccCccccccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHH----------------
Q 042825 524 KHSILTKVAGTFGYLAPEYIVT-GRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLAT---------------- 586 (631)
Q Consensus 524 ~~~~~~~~~gt~~Y~aPE~~~~-~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~---------------- 586 (631)
......||..|+|||++.+ ..++.++||||+||++|||++|+.||.+..... ....+..
T Consensus 185 ---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~-~l~~i~~~~g~p~~~~~~~~~~~ 260 (367)
T 2fst_X 185 ---EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID-QLKLILRLVGTPGAELLKKISSE 260 (367)
T ss_dssp ---------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCSCCHHHHTTCCCH
T ss_pred ---cCCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHhCCCCHHHHHHhhhH
Confidence 1345679999999999877 679999999999999999999999998653221 1111111
Q ss_pred ----HhHh------------hhcCChhHHHHHHhhcCCChhhHHhHHHHHHH
Q 042825 587 ----WFQK------------MHKNHDTFQMAIDKTIQLDEENLANVSTVAEL 622 (631)
Q Consensus 587 ----~~~~------------~~~~~~~l~~~id~~L~~d~~~r~~~~~vl~l 622 (631)
+... ....++.+.+++.+||..||.+|+++.++++-
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~h 312 (367)
T 2fst_X 261 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 312 (367)
T ss_dssp HHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred HHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcC
Confidence 0000 01124578999999999999999999998753
|
| >3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=1.7e-22 Score=208.39 Aligned_cols=212 Identities=23% Similarity=0.276 Sum_probs=145.6
Q ss_pred HhhcCCcccceeecCCCceEEEEEEec----CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc-----------------
Q 042825 414 RNATNNFSEENRLGRGGVGTVYKGELK----DGTEVGVKRMELGSVTEQGIAQFESEITVLTK----------------- 472 (631)
Q Consensus 414 ~~~t~~f~~~~~iG~G~fg~Vyk~~~~----~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~----------------- 472 (631)
....++|...+.||+|+||.||+|+.. .+..||||++..........+.+.+|+.++.+
T Consensus 30 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~ 109 (313)
T 3brb_A 30 VIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMS 109 (313)
T ss_dssp BCCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC--
T ss_pred ccCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeecc
Confidence 345567889999999999999999864 24589999998766566667889999998875
Q ss_pred ----------------CChhHHhHhhh-hcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEE
Q 042825 473 ----------------GTLGRHLFNWE-EEGLEPLEWNTRLNIALDVARG------------------------DDMRVA 511 (631)
Q Consensus 473 ----------------gsL~~~L~~~~-~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~ 511 (631)
|+|.+++.... ......+++.....|+.++++| +.+||+
T Consensus 110 ~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli~~~~~~kl~ 189 (313)
T 3brb_A 110 SQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRNFLHRDLAARNCMLRDDMTVCVA 189 (313)
T ss_dssp -----CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCSGGGEEECTTSCEEEC
T ss_pred ccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCcEEEe
Confidence 35555553211 1233568999999999888876 468999
Q ss_pred eeccccccCCCCccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChHHHHHHHHHh-H
Q 042825 512 DFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT-GRKVVDATHSDPEYIIHLATWF-Q 589 (631)
Q Consensus 512 DFGla~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~Ellt-G~~P~~~~~~~~~~~~~l~~~~-~ 589 (631)
|||+++...............+++.|+|||.+.+..++.++|||||||++|||++ |+.||................. .
T Consensus 190 Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~ 269 (313)
T 3brb_A 190 DFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYDYLLHGHRLK 269 (313)
T ss_dssp SCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTCCCC
T ss_pred ecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHHHcCCCCC
Confidence 9999987643322222334567889999999999999999999999999999999 8999986544321111111110 0
Q ss_pred hhhcCChhHHHHHHhhcCCChhhHHhHHHHHHHHHh
Q 042825 590 KMHKNHDTFQMAIDKTIQLDEENLANVSTVAELGDH 625 (631)
Q Consensus 590 ~~~~~~~~l~~~id~~L~~d~~~r~~~~~vl~lal~ 625 (631)
.....++++.+++..|+..||.+|+++.++++....
T Consensus 270 ~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~ 305 (313)
T 3brb_A 270 QPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEK 305 (313)
T ss_dssp CBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHH
T ss_pred CCccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence 111224679999999999999999999998875443
|
| >1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... | Back alignment and structure |
|---|
Probab=99.88 E-value=3.7e-23 Score=217.16 Aligned_cols=194 Identities=19% Similarity=0.239 Sum_probs=145.6
Q ss_pred cCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCC-CHHHHHHHHHHHHHHhc----------------------
Q 042825 417 TNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSV-TEQGIAQFESEITVLTK---------------------- 472 (631)
Q Consensus 417 t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~-~~~~~~~~~~Ei~~l~~---------------------- 472 (631)
.++|+..+.||+|+||.||+|+.. +|+.||||++..... .....+.+.+|++++.+
T Consensus 40 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 119 (350)
T 1rdq_E 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMV 119 (350)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred HHHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEE
Confidence 357889999999999999999976 599999999975321 11234678889998876
Q ss_pred ------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCC
Q 042825 473 ------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPEN 522 (631)
Q Consensus 473 ------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~ 522 (631)
|+|.+++... ..+++.....++.+++.| +.+||+|||+++.....
T Consensus 120 ~e~~~gg~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~ 194 (350)
T 1rdq_E 120 MEYVAGGEMFSHLRRI-----GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR 194 (350)
T ss_dssp EECCTTCBHHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECSSC
T ss_pred EcCCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCCcccccCccceEEECCCCCEEEcccccceeccCC
Confidence 5666666431 347888888888777765 56899999999876421
Q ss_pred CccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHH-hHhhhcCChhHHHH
Q 042825 523 GKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATW-FQKMHKNHDTFQMA 601 (631)
Q Consensus 523 ~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~-~~~~~~~~~~l~~~ 601 (631)
....+||+.|+|||++.+..++.++|||||||++|||++|+.||....... ....+... .......+.++.++
T Consensus 195 -----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~-~~~~i~~~~~~~p~~~~~~~~~l 268 (350)
T 1rdq_E 195 -----TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ-IYEKIVSGKVRFPSHFSSDLKDL 268 (350)
T ss_dssp -----BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHCCCCCCTTCCHHHHHH
T ss_pred -----cccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCHHH-HHHHHHcCCCCCCCCCCHHHHHH
Confidence 235689999999999999999999999999999999999999998643221 11112111 11111235789999
Q ss_pred HHhhcCCChhhHHh-----HHHHHH
Q 042825 602 IDKTIQLDEENLAN-----VSTVAE 621 (631)
Q Consensus 602 id~~L~~d~~~r~~-----~~~vl~ 621 (631)
|.++|..||.+|++ +.++++
T Consensus 269 i~~lL~~dp~~R~~~~~~~~~ei~~ 293 (350)
T 1rdq_E 269 LRNLLQVDLTKRFGNLKNGVNDIKN 293 (350)
T ss_dssp HHHHSCSCTTTCTTSSTTTTHHHHT
T ss_pred HHHHhhcCHHhccCCccCCHHHHHh
Confidence 99999999999987 776654
|
| >3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=1.2e-22 Score=214.08 Aligned_cols=206 Identities=16% Similarity=0.190 Sum_probs=145.7
Q ss_pred cCHHHHHhhcCCcccceeecCCCceEEEEEEecCCcEEEEEEEecCCCC---------HHHHHHHHHHHHHHhc------
Q 042825 408 IPIQVLRNATNNFSEENRLGRGGVGTVYKGELKDGTEVGVKRMELGSVT---------EQGIAQFESEITVLTK------ 472 (631)
Q Consensus 408 ~~~~~l~~~t~~f~~~~~iG~G~fg~Vyk~~~~~g~~vAvK~l~~~~~~---------~~~~~~~~~Ei~~l~~------ 472 (631)
..++++....++|...+.||+|+||.||+|+..+|+.||||++...... ....+++.+|++++.+
T Consensus 12 ~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i 91 (362)
T 3pg1_A 12 DLIAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNI 91 (362)
T ss_dssp HHHHHHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTB
T ss_pred HHHHHHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCc
Confidence 3467788899999999999999999999999888999999998653221 2234789999999876
Q ss_pred --------------------------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC---------------------
Q 042825 473 --------------------------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG--------------------- 505 (631)
Q Consensus 473 --------------------------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g--------------------- 505 (631)
|++.+++ ......+++.....++.+++.|
T Consensus 92 v~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~----~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~ 167 (362)
T 3pg1_A 92 LGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVI----HDQRIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILL 167 (362)
T ss_dssp CCCSEEEEECCTTTCCEEEEEEECCSEEHHHHH----HCTTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE
T ss_pred cceeeeEEeccCCCcceEEEEEccCCCCHHHHH----HhcccCCCHHHHHHHHHHHHHHHHHHHHCcCEecCCChHHEEE
Confidence 2222222 2233468899998888888776
Q ss_pred ---CCcEEEeeccccccCCCCccccccccccCccccccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHH
Q 042825 506 ---DDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVT-GRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYI 581 (631)
Q Consensus 506 ---~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~ 581 (631)
+.+||+|||+++..... .......||+.|+|||++.+ ..++.++||||+||++|||++|+.||.+..... ..
T Consensus 168 ~~~~~~kl~Dfg~~~~~~~~---~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~-~~ 243 (362)
T 3pg1_A 168 ADNNDITICDFNLAREDTAD---ANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYN-QL 243 (362)
T ss_dssp CTTCCEEECCTTC------------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HH
T ss_pred cCCCCEEEEecCcccccccc---cccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHH-HH
Confidence 56799999999865322 22345679999999999877 679999999999999999999999998653221 11
Q ss_pred HHHHHH---------------------------------hHhhhcCChhHHHHHHhhcCCChhhHHhHHHHHH
Q 042825 582 IHLATW---------------------------------FQKMHKNHDTFQMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 582 ~~l~~~---------------------------------~~~~~~~~~~l~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
..+... .......++.+.+++.+||..||.+|+++.++++
T Consensus 244 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 316 (362)
T 3pg1_A 244 NKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALR 316 (362)
T ss_dssp HHHHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HHHHHHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHc
Confidence 112111 0111122456899999999999999999999875
|
| >3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* | Back alignment and structure |
|---|
Probab=99.88 E-value=1.9e-22 Score=214.83 Aligned_cols=203 Identities=16% Similarity=0.216 Sum_probs=150.7
Q ss_pred hcCCcccceeecCC--CceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc--------------------
Q 042825 416 ATNNFSEENRLGRG--GVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK-------------------- 472 (631)
Q Consensus 416 ~t~~f~~~~~iG~G--~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~-------------------- 472 (631)
..++|+..+.||+| +||+||+|+.. +|+.||||++..........+.+.+|++++++
T Consensus 23 ~~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 102 (389)
T 3gni_B 23 EGGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELW 102 (389)
T ss_dssp CGGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred CCCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEE
Confidence 34578999999999 99999999976 69999999998766666667788999999876
Q ss_pred --------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccC
Q 042825 473 --------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVP 520 (631)
Q Consensus 473 --------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~ 520 (631)
|+|.+++.. .....+++.....|+.+++.| +.+||+|||.+....
T Consensus 103 lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~ 179 (389)
T 3gni_B 103 VVTSFMAYGSAKDLICT---HFMDGMNELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMI 179 (389)
T ss_dssp EEEECCTTCBHHHHHHH---TCTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCGGGCEECE
T ss_pred EEEEccCCCCHHHHHhh---hcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEcccccceeec
Confidence 566666643 223458888888888888876 567899999987543
Q ss_pred CCCcc-----ccccccccCccccccccccc--CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHhH----
Q 042825 521 ENGKH-----SILTKVAGTFGYLAPEYIVT--GRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQ---- 589 (631)
Q Consensus 521 ~~~~~-----~~~~~~~gt~~Y~aPE~~~~--~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~~---- 589 (631)
..... .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||.+..........+.....
T Consensus 180 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 259 (389)
T 3gni_B 180 SHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLD 259 (389)
T ss_dssp ETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHHHC----------
T ss_pred cccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCcccc
Confidence 21111 11233479999999999987 57999999999999999999999999865443221111110000
Q ss_pred ------------------------------------------hhhcCChhHHHHHHhhcCCChhhHHhHHHHHH
Q 042825 590 ------------------------------------------KMHKNHDTFQMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 590 ------------------------------------------~~~~~~~~l~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
.....++++.+++.+||..||.+|+++.++++
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~ 333 (389)
T 3gni_B 260 TSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLN 333 (389)
T ss_dssp ----------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred ccccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhc
Confidence 00112457899999999999999999998874
|
| >1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.88 E-value=1.9e-22 Score=213.13 Aligned_cols=194 Identities=21% Similarity=0.321 Sum_probs=140.2
Q ss_pred hcCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhcC---------------------
Q 042825 416 ATNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTKG--------------------- 473 (631)
Q Consensus 416 ~t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~g--------------------- 473 (631)
..++|...+.||+|+||.||+|+.. +|+.||||++..........+++.+|++++.+-
T Consensus 23 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~ 102 (367)
T 1cm8_A 23 VRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDF 102 (367)
T ss_dssp CBSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTC
T ss_pred ecceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccC
Confidence 3568999999999999999999975 699999999976555555677899999998761
Q ss_pred ------------ChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeecccc
Q 042825 474 ------------TLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVR 517 (631)
Q Consensus 474 ------------sL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~ 517 (631)
+|.+++ .. ..+++.+...++.++++| +.+||+|||+++
T Consensus 103 ~~~~lv~e~~~~~L~~~~----~~--~~l~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 176 (367)
T 1cm8_A 103 TDFYLVMPFMGTDLGKLM----KH--EKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLAR 176 (367)
T ss_dssp CCCEEEEECCSEEHHHHH----HH--CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCE
T ss_pred ceEEEEEecCCCCHHHHH----hc--CCCCHHHHHHHHHHHHHHHHHHHHCCccccCcCHHHEEEcCCCCEEEEeeeccc
Confidence 112222 11 357888888888888776 568999999998
Q ss_pred ccCCCCccccccccccCccccccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHH----------
Q 042825 518 LVPENGKHSILTKVAGTFGYLAPEYIVT-GRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLAT---------- 586 (631)
Q Consensus 518 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~---------- 586 (631)
.... .....+||..|+|||++.+ ..++.++||||+||++|||++|+.||.+..... ....+..
T Consensus 177 ~~~~-----~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~-~l~~i~~~~g~~~~~~~ 250 (367)
T 1cm8_A 177 QADS-----EMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLD-QLKEIMKVTGTPPAEFV 250 (367)
T ss_dssp ECCS-----SCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHHHCCCCHHHH
T ss_pred cccc-----ccCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHhcCCCCHHHH
Confidence 7632 1345679999999999877 679999999999999999999999998653221 1111111
Q ss_pred ----------HhHh------------hhcCChhHHHHHHhhcCCChhhHHhHHHHHH
Q 042825 587 ----------WFQK------------MHKNHDTFQMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 587 ----------~~~~------------~~~~~~~l~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
+... ....++.+.+++.++|..||.+|+++.++++
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~ 307 (367)
T 1cm8_A 251 QRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALA 307 (367)
T ss_dssp HTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred HHhhhHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhc
Confidence 0000 0122467899999999999999999999876
|
| >2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=2.4e-22 Score=213.55 Aligned_cols=151 Identities=19% Similarity=0.283 Sum_probs=117.9
Q ss_pred HhhcCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc--------------------
Q 042825 414 RNATNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK-------------------- 472 (631)
Q Consensus 414 ~~~t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~-------------------- 472 (631)
....++|...+.||+|+||+||+|+.. +++.||||++... .....++.+|+.++..
T Consensus 50 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~ 126 (382)
T 2vx3_A 50 EKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK---KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFM 126 (382)
T ss_dssp CEETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSS---HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEE
T ss_pred CEeeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEecc---HHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeec
Confidence 456789999999999999999999976 5889999999743 3344566677766543
Q ss_pred -------------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC----------------------------CCcEEE
Q 042825 473 -------------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG----------------------------DDMRVA 511 (631)
Q Consensus 473 -------------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g----------------------------~~~kl~ 511 (631)
|+|.+++.. .....+++.....++.+++.| +.+||+
T Consensus 127 ~~~~~~lv~e~~~~~L~~~l~~---~~~~~~~~~~~~~i~~qi~~al~~lH~~~~~ivHrDlkp~NIll~~~~~~~~kL~ 203 (382)
T 2vx3_A 127 FRNHLCLVFEMLSYNLYDLLRN---TNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIV 203 (382)
T ss_dssp ETTEEEEEEECCCCBHHHHHHH---TTTSCCCHHHHHHHHHHHHHHHHHHTSTTTCEECCCCSGGGEEESSTTSCCEEEC
T ss_pred cCCceEEEEecCCCCHHHHHhh---cCcCCCCHHHHHHHHHHHHHHHHHhccCCCCEEcCCCCcccEEEecCCCCcEEEE
Confidence 555555532 223458888888887776654 347899
Q ss_pred eeccccccCCCCccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCC
Q 042825 512 DFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATH 575 (631)
Q Consensus 512 DFGla~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~ 575 (631)
|||+++.... ......||+.|+|||++.+..++.++|||||||++|||+||+.||.+..
T Consensus 204 DFG~a~~~~~-----~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~ 262 (382)
T 2vx3_A 204 DFGSSCQLGQ-----RIYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGAN 262 (382)
T ss_dssp CCTTCEETTC-----CCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred eccCceeccc-----ccccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 9999987642 1235679999999999999999999999999999999999999998653
|
| >4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=5e-22 Score=202.12 Aligned_cols=197 Identities=28% Similarity=0.479 Sum_probs=146.0
Q ss_pred cCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHH-----HHHHHHHHHHHhc------------------
Q 042825 417 TNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQG-----IAQFESEITVLTK------------------ 472 (631)
Q Consensus 417 t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~-----~~~~~~Ei~~l~~------------------ 472 (631)
.++|...+.||+|+||+||+|+.. +++.||||++......... .+++.+|++++.+
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~ 97 (287)
T 4f0f_A 18 DNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPPR 97 (287)
T ss_dssp STTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTTE
T ss_pred hccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCCe
Confidence 467899999999999999999975 6899999998654332211 1678999999876
Q ss_pred --------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC--------------------------CC-----cEEEee
Q 042825 473 --------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG--------------------------DD-----MRVADF 513 (631)
Q Consensus 473 --------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g--------------------------~~-----~kl~DF 513 (631)
|+|.+++. +....+++.....++.+++.| +. +||+||
T Consensus 98 lv~e~~~~~~L~~~l~----~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~ivH~dikp~Nil~~~~~~~~~~~~kl~Df 173 (287)
T 4f0f_A 98 MVMEFVPCGDLYHRLL----DKAHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADF 173 (287)
T ss_dssp EEEECCTTCBHHHHHH----CTTSCCCHHHHHHHHHHHHHHHHHHHTSSSCCBCSCCSGGGEEESCCCTTCSCCEEECCC
T ss_pred EEEEecCCCCHHHHHh----cccCCccHHHHHHHHHHHHHHHHHHHhCCCCeecCCCCcceEEEeccCCCCceeEEeCCC
Confidence 45555443 234568898888888777654 22 799999
Q ss_pred ccccccCCCCccccccccccCcccccccccc--cCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHhH--
Q 042825 514 GLVRLVPENGKHSILTKVAGTFGYLAPEYIV--TGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQ-- 589 (631)
Q Consensus 514 Gla~~~~~~~~~~~~~~~~gt~~Y~aPE~~~--~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~~-- 589 (631)
|+++.... ......||+.|+|||++. ...++.++||||+||++|||++|+.||..................
T Consensus 174 g~~~~~~~-----~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~ 248 (287)
T 4f0f_A 174 GLSQQSVH-----SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLR 248 (287)
T ss_dssp TTCBCCSS-----CEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHHHHHHHHHSCCC
T ss_pred Cccccccc-----cccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHHHHHHHHhccCCC
Confidence 99985431 234567999999999984 455889999999999999999999999876554322121111100
Q ss_pred h--hhcCChhHHHHHHhhcCCChhhHHhHHHHHHH
Q 042825 590 K--MHKNHDTFQMAIDKTIQLDEENLANVSTVAEL 622 (631)
Q Consensus 590 ~--~~~~~~~l~~~id~~L~~d~~~r~~~~~vl~l 622 (631)
. ....++++.+++.+|+..||.+|+++.++++.
T Consensus 249 ~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~ 283 (287)
T 4f0f_A 249 PTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKE 283 (287)
T ss_dssp CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred CCCCcccCHHHHHHHHHHhcCChhhCcCHHHHHHH
Confidence 0 01224679999999999999999999998874
|
| >3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=99.88 E-value=1e-23 Score=219.98 Aligned_cols=197 Identities=19% Similarity=0.249 Sum_probs=145.1
Q ss_pred cCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCH-HHHHHHHHHHHHHhc----------------------
Q 042825 417 TNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTE-QGIAQFESEITVLTK---------------------- 472 (631)
Q Consensus 417 t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~-~~~~~~~~Ei~~l~~---------------------- 472 (631)
.++|...+.||+|+||.||+|+.. +++.||||++....... ...+.+.+|++++..
T Consensus 8 i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv 87 (336)
T 3h4j_B 8 IGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMV 87 (336)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 468999999999999999999964 68999999997532111 123568899999876
Q ss_pred -----CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCC
Q 042825 473 -----GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENG 523 (631)
Q Consensus 473 -----gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~ 523 (631)
|++.+++.. ...+++.....++.+++.| +.+||+|||+++.....
T Consensus 88 ~E~~~g~l~~~l~~-----~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~- 161 (336)
T 3h4j_B 88 IEYAGGELFDYIVE-----KKRMTEDEGRRFFQQIICAIEYCHRHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDG- 161 (336)
T ss_dssp ECCCCEEHHHHHHH-----HCSCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCSTTTEEECTTCCEEECCSSCTBTTTTS-
T ss_pred EECCCCcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCchhhEEEcCCCCEEEEEeccceeccCC-
Confidence 455555532 1357888888888888766 46899999999876422
Q ss_pred ccccccccccCcccccccccccCCC-CchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHH-HhHhhhcCChhHHHH
Q 042825 524 KHSILTKVAGTFGYLAPEYIVTGRI-TAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLAT-WFQKMHKNHDTFQMA 601 (631)
Q Consensus 524 ~~~~~~~~~gt~~Y~aPE~~~~~~~-~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~-~~~~~~~~~~~l~~~ 601 (631)
......+||+.|+|||++.+..+ +.++||||+||++|||++|+.||++....... ..+.. ........++++.++
T Consensus 162 --~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~-~~i~~~~~~~p~~~s~~~~~l 238 (336)
T 3h4j_B 162 --NFLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLF-KKVNSCVYVMPDFLSPGAQSL 238 (336)
T ss_dssp --BTTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTCB-CCCCSSCCCCCTTSCHHHHHH
T ss_pred --cccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHHH-HHHHcCCCCCcccCCHHHHHH
Confidence 22345689999999999988776 78999999999999999999999864322100 00000 000011125688999
Q ss_pred HHhhcCCChhhHHhHHHHHHH
Q 042825 602 IDKTIQLDEENLANVSTVAEL 622 (631)
Q Consensus 602 id~~L~~d~~~r~~~~~vl~l 622 (631)
+.++|..||.+|+++.++++-
T Consensus 239 i~~~L~~dP~~Rpt~~eil~h 259 (336)
T 3h4j_B 239 IRRMIVADPMQRITIQEIRRD 259 (336)
T ss_dssp HHTTSCSSGGGSCCHHHHTTC
T ss_pred HHHHcCCChhHCcCHHHHHhC
Confidence 999999999999999988753
|
| >2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.88 E-value=1.4e-22 Score=214.72 Aligned_cols=192 Identities=20% Similarity=0.262 Sum_probs=140.2
Q ss_pred ccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc---------------------------
Q 042825 421 SEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK--------------------------- 472 (631)
Q Consensus 421 ~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~--------------------------- 472 (631)
...+.||+|+||.||+|+.. +|+.||||++.... ....+++.+|++++.+
T Consensus 92 ~~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~ 169 (373)
T 2x4f_A 92 SKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRG--MKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVD 169 (373)
T ss_dssp EEEEECC-----CEEEEEETTTCCEEEEEEEECCS--HHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCT
T ss_pred ecceEEecCcCEEEEEEEEcCCCcEEEEEEEcccc--cccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCC
Confidence 44678999999999999965 58999999998643 3456789999999976
Q ss_pred -CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC--------------------------CCcEEEeeccccccCCCCcc
Q 042825 473 -GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG--------------------------DDMRVADFGLVRLVPENGKH 525 (631)
Q Consensus 473 -gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g--------------------------~~~kl~DFGla~~~~~~~~~ 525 (631)
|+|.+++.. ....+++..+..++.++++| ..+||+|||+++......
T Consensus 170 ~~~L~~~l~~----~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~-- 243 (373)
T 2x4f_A 170 GGELFDRIID----ESYNLTELDTILFMKQICEGIRHMHQMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPRE-- 243 (373)
T ss_dssp TCEEHHHHHH----TGGGCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTC--
T ss_pred CCcHHHHHHh----cCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEecCCCCcEEEEeCCCceecCCcc--
Confidence 455555532 23458888888888888765 347899999998764322
Q ss_pred ccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHh-----HhhhcCChhHHH
Q 042825 526 SILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWF-----QKMHKNHDTFQM 600 (631)
Q Consensus 526 ~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~-----~~~~~~~~~l~~ 600 (631)
......||+.|+|||++....++.++|||||||++|||++|+.||.+....+ ....+.... ......++++.+
T Consensus 244 -~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~ 321 (373)
T 2x4f_A 244 -KLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAE-TLNNILACRWDLEDEEFQDISEEAKE 321 (373)
T ss_dssp -BCCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHHH-HHHHHHHTCCCSCSGGGTTSCHHHHH
T ss_pred -ccccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHhccCCCChhhhccCCHHHHH
Confidence 2334579999999999988899999999999999999999999998653221 111111110 011123578999
Q ss_pred HHHhhcCCChhhHHhHHHHHHH
Q 042825 601 AIDKTIQLDEENLANVSTVAEL 622 (631)
Q Consensus 601 ~id~~L~~d~~~r~~~~~vl~l 622 (631)
+|.++|..||.+|+++.++++-
T Consensus 322 li~~~L~~dp~~Rps~~e~l~h 343 (373)
T 2x4f_A 322 FISKLLIKEKSWRISASEALKH 343 (373)
T ss_dssp HHHTTSCSSGGGSCCHHHHHHS
T ss_pred HHHHHcCCChhhCCCHHHHhcC
Confidence 9999999999999999998763
|
| >1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... | Back alignment and structure |
|---|
Probab=99.88 E-value=7.4e-23 Score=222.48 Aligned_cols=201 Identities=24% Similarity=0.350 Sum_probs=146.3
Q ss_pred hcCCcccceeecCCCceEEEEEEecCCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc-----------------------
Q 042825 416 ATNNFSEENRLGRGGVGTVYKGELKDGTEVGVKRMELGSVTEQGIAQFESEITVLTK----------------------- 472 (631)
Q Consensus 416 ~t~~f~~~~~iG~G~fg~Vyk~~~~~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~----------------------- 472 (631)
..++|...+.||+|+||.||+|+++++..||||+++..... .++|.+|+++|.+
T Consensus 182 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~---~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~iv~e 258 (452)
T 1fmk_A 182 PRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS---PEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTE 258 (452)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTSSC---HHHHHHHHHHHHHCCCTTBCCEEEEECSSSCEEEEC
T ss_pred ChhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCCCC---HHHHHHHHHHHHhCCCCCEeeEEEEEcCCceEEEeh
Confidence 45678889999999999999999988888999999865432 4679999999876
Q ss_pred ----CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCCc
Q 042825 473 ----GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENGK 524 (631)
Q Consensus 473 ----gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~~ 524 (631)
|+|.+++... ....+++.....++.+++.| +.+||+|||+++..... .
T Consensus 259 ~~~~gsL~~~l~~~---~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~-~ 334 (452)
T 1fmk_A 259 YMSKGSLLDFLKGE---TGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDN-E 334 (452)
T ss_dssp CCTTCBHHHHHSHH---HHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCCTTC-------
T ss_pred hhcCCCHHHHHHhc---CCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEECCCCCEEECCCccceecCCC-c
Confidence 6777777431 12358888999999998876 45799999999876422 1
Q ss_pred cccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChHHHHHHHHHhH--hhhcCChhHHHH
Q 042825 525 HSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT-GRKVVDATHSDPEYIIHLATWFQ--KMHKNHDTFQMA 601 (631)
Q Consensus 525 ~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~Ellt-G~~P~~~~~~~~~~~~~l~~~~~--~~~~~~~~l~~~ 601 (631)
........+|+.|+|||++....++.++|||||||++|||+| |+.||.+....+ ....+..-.+ .....++.+.++
T Consensus 335 ~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~-~~~~i~~~~~~~~~~~~~~~l~~l 413 (452)
T 1fmk_A 335 YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE-VLDQVERGYRMPCPPECPESLHDL 413 (452)
T ss_dssp --------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH-HHHHHHTTCCCCCCTTSCHHHHHH
T ss_pred eecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHHH-HHHHHHcCCCCCCCCCCCHHHHHH
Confidence 122234567889999999998999999999999999999999 999998653221 1111111000 011224678999
Q ss_pred HHhhcCCChhhHHhHHHHHHHHH
Q 042825 602 IDKTIQLDEENLANVSTVAELGD 624 (631)
Q Consensus 602 id~~L~~d~~~r~~~~~vl~lal 624 (631)
+.+|+..||.+||++.++++..-
T Consensus 414 i~~cl~~dP~~Rpt~~~l~~~L~ 436 (452)
T 1fmk_A 414 MCQCWRKEPEERPTFEYLQAFLE 436 (452)
T ss_dssp HHHHTCSSGGGSCCHHHHHHHHH
T ss_pred HHHHccCChhhCcCHHHHHHHHH
Confidence 99999999999999999887543
|
| >2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=2e-22 Score=209.77 Aligned_cols=202 Identities=15% Similarity=0.166 Sum_probs=148.5
Q ss_pred cCCcccceeecCCCceEEEEEEe-cCCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc-----------------------
Q 042825 417 TNNFSEENRLGRGGVGTVYKGEL-KDGTEVGVKRMELGSVTEQGIAQFESEITVLTK----------------------- 472 (631)
Q Consensus 417 t~~f~~~~~iG~G~fg~Vyk~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~----------------------- 472 (631)
.++|...+.||+|+||+||+|+. .+|+.||||++...... +++.+|++++.+
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~----~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv 83 (330)
T 2izr_A 8 GPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRA----PQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMV 83 (330)
T ss_dssp TTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCSS----CCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEE
T ss_pred cCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccch----HHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEE
Confidence 46799999999999999999996 46899999999765322 346777777654
Q ss_pred -----CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CC-----cEEEeeccccc
Q 042825 473 -----GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DD-----MRVADFGLVRL 518 (631)
Q Consensus 473 -----gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~-----~kl~DFGla~~ 518 (631)
++|.+++.. ....+++.....|+.+++.| +. +||+|||+++.
T Consensus 84 ~e~~~~~L~~~~~~----~~~~~~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~ 159 (330)
T 2izr_A 84 LELLGPSLEDLFDL----CDRTFSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKE 159 (330)
T ss_dssp EECCCCBHHHHHHH----TTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEE
T ss_pred EEeCCCCHHHHHHH----cCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeeccCCCCCCceEEEEEccccee
Confidence 566666643 23568999999999998876 22 89999999987
Q ss_pred cCCCCccc-----cccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHH--HHHHHHhH--
Q 042825 519 VPENGKHS-----ILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYI--IHLATWFQ-- 589 (631)
Q Consensus 519 ~~~~~~~~-----~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~--~~l~~~~~-- 589 (631)
........ ......||+.|+|||++.+..++.++|||||||++|||++|+.||.+........ ..+.....
T Consensus 160 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~ 239 (330)
T 2izr_A 160 YIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRAT 239 (330)
T ss_dssp SBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHHHHHHHHHHHHHS
T ss_pred eecCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccHHHHHHHHHhhhccC
Confidence 64322111 1245789999999999999999999999999999999999999998754432111 11111111
Q ss_pred ---hhhcCChhHHHHHHhhcCCChhhHHhHHHHHHHHHhh
Q 042825 590 ---KMHKNHDTFQMAIDKTIQLDEENLANVSTVAELGDHC 626 (631)
Q Consensus 590 ---~~~~~~~~l~~~id~~L~~d~~~r~~~~~vl~lal~C 626 (631)
......+++.+++..|+..||.+||++.++.+.....
T Consensus 240 ~~~~~~~~~p~~~~li~~~l~~~p~~RP~~~~l~~~l~~~ 279 (330)
T 2izr_A 240 PIEVLCENFPEMATYLRYVRRLDFFEKPDYDYLRKLFTDL 279 (330)
T ss_dssp CHHHHTTTCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHH
T ss_pred CHHHHhccChHHHHHHHHHHhCCCCCCCCHHHHHHHHHHH
Confidence 1111124899999999999999999999888765433
|
| >1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.88 E-value=1.6e-22 Score=215.03 Aligned_cols=196 Identities=16% Similarity=0.196 Sum_probs=148.7
Q ss_pred hcCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc----------------------
Q 042825 416 ATNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK---------------------- 472 (631)
Q Consensus 416 ~t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~---------------------- 472 (631)
..++|+..+.||+|+||.||+|+.. +|+.||+|++.... ......+.+|++++.+
T Consensus 49 ~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~--~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv 126 (387)
T 1kob_A 49 VYDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPY--PLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLI 126 (387)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS--HHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEE
T ss_pred cccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccc--hhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEE
Confidence 3467999999999999999999976 58999999997643 3345678999999976
Q ss_pred ------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC--------------------------CCcEEEeeccccccC
Q 042825 473 ------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG--------------------------DDMRVADFGLVRLVP 520 (631)
Q Consensus 473 ------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g--------------------------~~~kl~DFGla~~~~ 520 (631)
|+|.+++. .....+++.....++.+++.| +.+||+|||+++...
T Consensus 127 ~E~~~gg~L~~~l~----~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~ 202 (387)
T 1kob_A 127 LEFLSGGELFDRIA----AEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLN 202 (387)
T ss_dssp EECCCCCBHHHHTT----CTTCCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTCCCEEECCCTTCEECC
T ss_pred EEcCCCCcHHHHHH----hhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccchHHeEEecCCCCceEEEecccceecC
Confidence 55655553 223458888888888888766 348999999998774
Q ss_pred CCCccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHhHh-----hhcCC
Q 042825 521 ENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQK-----MHKNH 595 (631)
Q Consensus 521 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~~~-----~~~~~ 595 (631)
... ......||+.|+|||++.+..++.++|||||||++|||++|+.||.+..... ....+...... ....+
T Consensus 203 ~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~-~~~~i~~~~~~~~~~~~~~~s 278 (387)
T 1kob_A 203 PDE---IVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLE-TLQNVKRCDWEFDEDAFSSVS 278 (387)
T ss_dssp TTS---CEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHH-HHHHHHHCCCCCCSSTTTTSC
T ss_pred CCc---ceeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHHH-HHHHHHhCCCCCCccccccCC
Confidence 322 2334579999999999999899999999999999999999999998643211 11111111000 01235
Q ss_pred hhHHHHHHhhcCCChhhHHhHHHHHH
Q 042825 596 DTFQMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 596 ~~l~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
+++.++|.+||..||.+|+++.++++
T Consensus 279 ~~~~~li~~~L~~dP~~Rpt~~ell~ 304 (387)
T 1kob_A 279 PEAKDFIKNLLQKEPRKRLTVHDALE 304 (387)
T ss_dssp HHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred HHHHHHHHHHcCCChhHCcCHHHHhh
Confidence 68999999999999999999999876
|
| >2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=5e-23 Score=217.87 Aligned_cols=193 Identities=21% Similarity=0.239 Sum_probs=133.6
Q ss_pred cCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCC-HHHHHHHHHHHHHHhc----------------------
Q 042825 417 TNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVT-EQGIAQFESEITVLTK---------------------- 472 (631)
Q Consensus 417 t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~-~~~~~~~~~Ei~~l~~---------------------- 472 (631)
.++|+..+.||+|+||.||+|+.+ +++.||||++...... ....+.+.+|..++.+
T Consensus 37 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~l 116 (373)
T 2r5t_A 37 PSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYF 116 (373)
T ss_dssp GGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEE
Confidence 357899999999999999999976 4889999999765432 2334556777766422
Q ss_pred -------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCC
Q 042825 473 -------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPE 521 (631)
Q Consensus 473 -------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~ 521 (631)
|+|.+++.. ...+.+.....++.+++.| +.+||+|||+++....
T Consensus 117 v~E~~~gg~L~~~l~~-----~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~ikL~DFG~a~~~~~ 191 (373)
T 2r5t_A 117 VLDYINGGELFYHLQR-----ERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIE 191 (373)
T ss_dssp EEECCCSCBHHHHHHH-----HSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCCBCGGGBC
T ss_pred EEeCCCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEECCCCCEEEeeCcccccccc
Confidence 567666643 1346666666677666655 5689999999986432
Q ss_pred CCccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHh-HhhhcCChhHHH
Q 042825 522 NGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWF-QKMHKNHDTFQM 600 (631)
Q Consensus 522 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~-~~~~~~~~~l~~ 600 (631)
.. ......+||+.|+|||++.+..++.++|||||||++|||++|+.||.+....+ ....+.... ......+.++.+
T Consensus 192 ~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~ 268 (373)
T 2r5t_A 192 HN--STTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAE-MYDNILNKPLQLKPNITNSARH 268 (373)
T ss_dssp CC--CCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHHH-HHHHHHHSCCCCCSSSCHHHHH
T ss_pred CC--CccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHH-HHHHHHhcccCCCCCCCHHHHH
Confidence 21 23456789999999999999999999999999999999999999998643221 111222211 111123578999
Q ss_pred HHHhhcCCChhhHHhHH
Q 042825 601 AIDKTIQLDEENLANVS 617 (631)
Q Consensus 601 ~id~~L~~d~~~r~~~~ 617 (631)
+|.++|..||.+|+++.
T Consensus 269 li~~lL~~dp~~R~~~~ 285 (373)
T 2r5t_A 269 LLEGLLQKDRTKRLGAK 285 (373)
T ss_dssp HHHHHTCSSGGGSTTTT
T ss_pred HHHHHcccCHHhCCCCC
Confidence 99999999999998864
|
| >3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A | Back alignment and structure |
|---|
Probab=99.88 E-value=3.2e-23 Score=235.82 Aligned_cols=193 Identities=20% Similarity=0.259 Sum_probs=143.9
Q ss_pred hcCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCC-CHHHHHHHHHHHHHHhc---------------------
Q 042825 416 ATNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSV-TEQGIAQFESEITVLTK--------------------- 472 (631)
Q Consensus 416 ~t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~-~~~~~~~~~~Ei~~l~~--------------------- 472 (631)
..++|+..++||+|+||.||+|+.. +++.||||+++.... .....+.+..|..++..
T Consensus 339 ~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~ 418 (674)
T 3pfq_A 339 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY 418 (674)
T ss_dssp -CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEE
T ss_pred cccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEE
Confidence 4568999999999999999999976 588999999975321 11234567788887764
Q ss_pred --------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccC
Q 042825 473 --------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVP 520 (631)
Q Consensus 473 --------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~ 520 (631)
|+|..++... ..+++.....++.+++.| +.+||+|||+|+...
T Consensus 419 lV~E~~~gg~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH~~gIiHrDLKp~NILl~~~g~ikL~DFGla~~~~ 493 (674)
T 3pfq_A 419 FVMEYVNGGDLMYHIQQV-----GRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENI 493 (674)
T ss_dssp EEEECCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHHTSEECCCCCSTTEEECSSSCEEECCCTTCEECC
T ss_pred EEEeCcCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhCCeEeccCChhhEEEcCCCcEEEeecceeeccc
Confidence 6676666431 357888888888888776 568999999998643
Q ss_pred CCCccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHH-HhHhhhcCChhHH
Q 042825 521 ENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLAT-WFQKMHKNHDTFQ 599 (631)
Q Consensus 521 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~-~~~~~~~~~~~l~ 599 (631)
... ......+||+.|+|||++.+..|+.++|||||||++|||++|+.||.+....+. ...+.. ........+.++.
T Consensus 494 ~~~--~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~~~~-~~~i~~~~~~~p~~~s~~~~ 570 (674)
T 3pfq_A 494 WDG--VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDEL-FQSIMEHNVAYPKSMSKEAV 570 (674)
T ss_dssp CTT--CCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HHHHHSSCCCCCTTSCHHHH
T ss_pred cCC--cccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCHHHH-HHHHHhCCCCCCccCCHHHH
Confidence 222 234567899999999999999999999999999999999999999986533211 111111 1111112357899
Q ss_pred HHHHhhcCCChhhHHhH
Q 042825 600 MAIDKTIQLDEENLANV 616 (631)
Q Consensus 600 ~~id~~L~~d~~~r~~~ 616 (631)
++|.++|..||.+|+++
T Consensus 571 ~li~~lL~~dP~~R~~~ 587 (674)
T 3pfq_A 571 AICKGLMTKHPGKRLGC 587 (674)
T ss_dssp HHHHHHSCSSSTTCTTC
T ss_pred HHHHHHccCCHHHCCCC
Confidence 99999999999999876
|
| >1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=1.2e-22 Score=213.06 Aligned_cols=194 Identities=21% Similarity=0.318 Sum_probs=144.9
Q ss_pred CCcccceeecCCCceEEEEEEe-cCCcEEEEEEEecCCC-CHHHHHHHHHHHHHHhc-----------------------
Q 042825 418 NNFSEENRLGRGGVGTVYKGEL-KDGTEVGVKRMELGSV-TEQGIAQFESEITVLTK----------------------- 472 (631)
Q Consensus 418 ~~f~~~~~iG~G~fg~Vyk~~~-~~g~~vAvK~l~~~~~-~~~~~~~~~~Ei~~l~~----------------------- 472 (631)
+.|...+.||+|+||+||+|+. .+|+.||||++..... .....+++.+|++++.+
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 133 (348)
T 1u5q_A 54 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM 133 (348)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEE
Confidence 4588889999999999999996 4699999999976533 23445778999999876
Q ss_pred ----CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCCc
Q 042825 473 ----GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENGK 524 (631)
Q Consensus 473 ----gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~~ 524 (631)
|++.+.+.. ....+++.....++.++++| +.+||+|||+++....
T Consensus 134 e~~~g~l~~~l~~----~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~--- 206 (348)
T 1u5q_A 134 EYCLGSASDLLEV----HKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP--- 206 (348)
T ss_dssp ECCSEEHHHHHHH----HTSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTTEEEECCCTTCBSSSS---
T ss_pred ecCCCCHHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEeeccCceecCC---
Confidence 444444432 23568999999999888876 4578999999987632
Q ss_pred cccccccccCcccccccccc---cCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHhHhh---hcCChhH
Q 042825 525 HSILTKVAGTFGYLAPEYIV---TGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQKM---HKNHDTF 598 (631)
Q Consensus 525 ~~~~~~~~gt~~Y~aPE~~~---~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~~~~---~~~~~~l 598 (631)
.....||+.|+|||++. ...++.++|||||||++|||++|+.||....... ....+....... ...++.+
T Consensus 207 ---~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l 282 (348)
T 1u5q_A 207 ---ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS-ALYHIAQNESPALQSGHWSEYF 282 (348)
T ss_dssp ---BCCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH-HHHHHHHSCCCCCCCTTSCHHH
T ss_pred ---CCcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHhcCCCCCCCCCCCHHH
Confidence 23457999999999984 5679999999999999999999999997543211 111111111110 1124678
Q ss_pred HHHHHhhcCCChhhHHhHHHHHHH
Q 042825 599 QMAIDKTIQLDEENLANVSTVAEL 622 (631)
Q Consensus 599 ~~~id~~L~~d~~~r~~~~~vl~l 622 (631)
.+++.+||..||.+|+++.++++-
T Consensus 283 ~~li~~~l~~dP~~Rps~~~ll~h 306 (348)
T 1u5q_A 283 RNFVDSCLQKIPQDRPTSEVLLKH 306 (348)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHTTC
T ss_pred HHHHHHHcccChhhCcCHHHHhhC
Confidence 999999999999999999988753
|
| >3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=1.5e-22 Score=212.49 Aligned_cols=201 Identities=18% Similarity=0.257 Sum_probs=145.6
Q ss_pred cCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhcC----------------------
Q 042825 417 TNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTKG---------------------- 473 (631)
Q Consensus 417 t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~g---------------------- 473 (631)
.++|...+.||+|+||+||+|+.. +|+.||||++............+.+|++++.+-
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 95 (351)
T 3mi9_A 16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRC 95 (351)
T ss_dssp GGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC-------
T ss_pred ccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccC
Confidence 467999999999999999999974 689999999876544433446788899888761
Q ss_pred -------------ChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccc
Q 042825 474 -------------TLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLV 516 (631)
Q Consensus 474 -------------sL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla 516 (631)
++.+.+ ......+++.....|+.+++.| +.+||+|||++
T Consensus 96 ~~~~~lv~e~~~~~l~~~l----~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a 171 (351)
T 3mi9_A 96 KGSIYLVFDFCEHDLAGLL----SNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLA 171 (351)
T ss_dssp -CEEEEEEECCSEEHHHHH----HCTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred CceEEEEEeccCCCHHHHH----hhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcCCCCEEEccchhc
Confidence 111111 1223468899999999888876 56899999999
Q ss_pred cccCCCCc--cccccccccCccccccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHhHhhh-
Q 042825 517 RLVPENGK--HSILTKVAGTFGYLAPEYIVT-GRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQKMH- 592 (631)
Q Consensus 517 ~~~~~~~~--~~~~~~~~gt~~Y~aPE~~~~-~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~~~~~- 592 (631)
+....... ........||+.|+|||++.+ ..++.++|||||||++|||+||+.||.+..... ....+........
T Consensus 172 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~-~~~~i~~~~~~~~~ 250 (351)
T 3mi9_A 172 RAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQH-QLALISQLCGSITP 250 (351)
T ss_dssp EECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCCCCT
T ss_pred ccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHHhCCCCh
Confidence 87642211 122345678999999999876 458999999999999999999999998653221 1111221110000
Q ss_pred --------------------------------cCChhHHHHHHhhcCCChhhHHhHHHHHHH
Q 042825 593 --------------------------------KNHDTFQMAIDKTIQLDEENLANVSTVAEL 622 (631)
Q Consensus 593 --------------------------------~~~~~l~~~id~~L~~d~~~r~~~~~vl~l 622 (631)
..++.+.+++.++|..||.+|+++.++++-
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 312 (351)
T 3mi9_A 251 EVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNH 312 (351)
T ss_dssp TTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred hhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhCC
Confidence 013568899999999999999999998763
|
| >2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=1.8e-22 Score=208.00 Aligned_cols=208 Identities=20% Similarity=0.274 Sum_probs=154.3
Q ss_pred hcCCcccceeecCCCceEEEEEEec------CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc-----------------
Q 042825 416 ATNNFSEENRLGRGGVGTVYKGELK------DGTEVGVKRMELGSVTEQGIAQFESEITVLTK----------------- 472 (631)
Q Consensus 416 ~t~~f~~~~~iG~G~fg~Vyk~~~~------~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~----------------- 472 (631)
..++|...+.||+|+||.||+|+.. +++.||||++.... .....+++.+|++++.+
T Consensus 21 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~ 99 (314)
T 2ivs_A 21 PRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENA-SPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDG 99 (314)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTC-CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSS
T ss_pred chhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCC-CHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCC
Confidence 3567889999999999999999862 35889999997543 45566889999999876
Q ss_pred -----------CChhHHhHhhhhc-------------------CCCCCCHHHHHHHHHHhhcC-----------------
Q 042825 473 -----------GTLGRHLFNWEEE-------------------GLEPLEWNTRLNIALDVARG----------------- 505 (631)
Q Consensus 473 -----------gsL~~~L~~~~~~-------------------~~~~L~~~~~~~I~~~ia~g----------------- 505 (631)
|+|.+++...... ....+++.....++.+++.|
T Consensus 100 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~ 179 (314)
T 2ivs_A 100 PLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAAR 179 (314)
T ss_dssp SCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHTTEECCCCSGG
T ss_pred ceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHCCCcccccchh
Confidence 6777777542210 11347888888998888876
Q ss_pred -------CCcEEEeeccccccCCCCccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCC
Q 042825 506 -------DDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT-GRKVVDATHSD 577 (631)
Q Consensus 506 -------~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~Ellt-G~~P~~~~~~~ 577 (631)
+.+||+|||+++...............+|+.|+|||.+.+..++.++||||+||++|||+| |+.||.+....
T Consensus 180 NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~ 259 (314)
T 2ivs_A 180 NILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPE 259 (314)
T ss_dssp GEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGG
T ss_pred eEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCCHH
Confidence 4578999999987653332223344567899999999998889999999999999999999 99999865443
Q ss_pred hHHHHHHHHHh--HhhhcCChhHHHHHHhhcCCChhhHHhHHHHHHHHHh
Q 042825 578 PEYIIHLATWF--QKMHKNHDTFQMAIDKTIQLDEENLANVSTVAELGDH 625 (631)
Q Consensus 578 ~~~~~~l~~~~--~~~~~~~~~l~~~id~~L~~d~~~r~~~~~vl~lal~ 625 (631)
... ..+.... ......++++.+++.+|+..||.+|+++.++++....
T Consensus 260 ~~~-~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~ 308 (314)
T 2ivs_A 260 RLF-NLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEK 308 (314)
T ss_dssp GHH-HHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred HHH-HHhhcCCcCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence 211 1111110 0111235689999999999999999999998876443
|
| >2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... | Back alignment and structure |
|---|
Probab=99.88 E-value=1.9e-22 Score=203.80 Aligned_cols=196 Identities=20% Similarity=0.325 Sum_probs=147.9
Q ss_pred cCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc-----------------------
Q 042825 417 TNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK----------------------- 472 (631)
Q Consensus 417 t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~----------------------- 472 (631)
.++|+..+.||+|+||.||+|+.. +++.||||++...... ...+.+.+|++++.+
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 84 (276)
T 2yex_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV-DCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFL 84 (276)
T ss_dssp HHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCT-THHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred ecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccch-hhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEE
Confidence 457889999999999999999976 6899999999754322 345778999998876
Q ss_pred -----CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCC
Q 042825 473 -----GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENG 523 (631)
Q Consensus 473 -----gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~ 523 (631)
++|.+++. ....+++.....++.+++.| +.+||+|||+++......
T Consensus 85 e~~~~~~L~~~l~-----~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~ 159 (276)
T 2yex_A 85 EYCSGGELFDRIE-----PDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNN 159 (276)
T ss_dssp ECCTTEEGGGGSB-----TTTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECEETT
T ss_pred EecCCCcHHHHHh-----hccCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCChHHEEEccCCCEEEeeCCCccccCCCc
Confidence 24444331 22458888888888888765 567899999998764332
Q ss_pred ccccccccccCcccccccccccCCC-CchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHhHh------hhcCCh
Q 042825 524 KHSILTKVAGTFGYLAPEYIVTGRI-TAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQK------MHKNHD 596 (631)
Q Consensus 524 ~~~~~~~~~gt~~Y~aPE~~~~~~~-~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~~~------~~~~~~ 596 (631)
.........||..|+|||.+.+..+ +.++|||||||++|||++|+.||+........ ...|... ....++
T Consensus 160 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 236 (276)
T 2yex_A 160 RERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE---YSDWKEKKTYLNPWKKIDS 236 (276)
T ss_dssp EECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHH---HHHHHTTCTTSTTGGGSCH
T ss_pred chhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHH---HHHhhhcccccCchhhcCH
Confidence 2223455679999999999987765 78999999999999999999999865543222 2222211 112356
Q ss_pred hHHHHHHhhcCCChhhHHhHHHHHH
Q 042825 597 TFQMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 597 ~l~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
.+.+++.++|..||.+|+++.++++
T Consensus 237 ~~~~li~~~l~~~p~~Rps~~~il~ 261 (276)
T 2yex_A 237 APLALLHKILVENPSARITIPDIKK 261 (276)
T ss_dssp HHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred HHHHHHHHHCCCCchhCCCHHHHhc
Confidence 8899999999999999999998765
|
| >3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7} | Back alignment and structure |
|---|
Probab=99.88 E-value=3.7e-22 Score=210.19 Aligned_cols=202 Identities=17% Similarity=0.205 Sum_probs=147.6
Q ss_pred cCHHHHHhhcCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc--------------
Q 042825 408 IPIQVLRNATNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK-------------- 472 (631)
Q Consensus 408 ~~~~~l~~~t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~-------------- 472 (631)
+++.+.....++|...+.||+|+||+||+|+.. +++.||||++... ....+.+..|++++.+
T Consensus 25 ~~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~ 101 (360)
T 3llt_A 25 FSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNI---KKYTRSAKIEADILKKIQNDDINNNNIVKY 101 (360)
T ss_dssp CCCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC---HHHHHHHHHHHHHHHHTCCCSTTGGGBCCE
T ss_pred eeeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccc---hhhhhhhHHHHHHHHHhcccCCCCCCeecc
Confidence 444445567789999999999999999999975 6899999999642 3445667778877654
Q ss_pred ------------------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC-----------------------------
Q 042825 473 ------------------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG----------------------------- 505 (631)
Q Consensus 473 ------------------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g----------------------------- 505 (631)
++|.+++.. .....+++.....++.+++.|
T Consensus 102 ~~~~~~~~~~~lv~e~~~~~L~~~~~~---~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~~~ 178 (360)
T 3llt_A 102 HGKFMYYDHMCLIFEPLGPSLYEIITR---NNYNGFHIEDIKLYCIEILKALNYLRKMSLTHTDLKPENILLDDPYFEKS 178 (360)
T ss_dssp EEEEEETTEEEEEECCCCCBHHHHHHH---TTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCTTCCEE
T ss_pred cceeeECCeeEEEEcCCCCCHHHHHHh---cCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCcccEEEcccccccc
Confidence 455555532 223458888888888887765
Q ss_pred --------------------CCcEEEeeccccccCCCCccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHH
Q 042825 506 --------------------DDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLI 565 (631)
Q Consensus 506 --------------------~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~Ell 565 (631)
..+||+|||+++.... ......||+.|+|||++.+..++.++|||||||++|||+
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell 253 (360)
T 3llt_A 179 LITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSD-----YHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELY 253 (360)
T ss_dssp EEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTS-----CCCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHH
T ss_pred ccchhcccccccccccccCCCCEEEEeccCceecCC-----CCcCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHH
Confidence 1368999999987532 123567999999999999999999999999999999999
Q ss_pred cCCCCCCCCCCChHHHHHHHHHhH--------h---------------------------------------hhcCChhH
Q 042825 566 TGRKVVDATHSDPEYIIHLATWFQ--------K---------------------------------------MHKNHDTF 598 (631)
Q Consensus 566 tG~~P~~~~~~~~~~~~~l~~~~~--------~---------------------------------------~~~~~~~l 598 (631)
||+.||......+ ....+..... . .....+.+
T Consensus 254 ~g~~pf~~~~~~~-~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l 332 (360)
T 3llt_A 254 TGSLLFRTHEHME-HLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIKHELF 332 (360)
T ss_dssp HSSCSCCCSSHHH-HHHHHHHHTCCCCHHHHHHHTTSGGGGGEETTTTEECTTTTCSCHHHHHHHHTCCCHHHHCCCHHH
T ss_pred HCCCCCCCCcHHH-HHHHHHHhcCCCCHHHHhhhhhccCccccCcccceecCcccccchhhhhhhhhcccccccchHHHH
Confidence 9999998643221 1111111100 0 00012556
Q ss_pred HHHHHhhcCCChhhHHhHHHHHH
Q 042825 599 QMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 599 ~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
.+++.+||..||.+|+++.++++
T Consensus 333 ~~li~~~L~~dP~~Rpta~elL~ 355 (360)
T 3llt_A 333 CDFLYSILQIDPTLRPSPAELLK 355 (360)
T ss_dssp HHHHHHHCCSSGGGSCCHHHHTT
T ss_pred HHHHHHHhcCChhhCCCHHHHhc
Confidence 79999999999999999998864
|
| >1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8 | Back alignment and structure |
|---|
Probab=99.88 E-value=1.6e-23 Score=216.51 Aligned_cols=226 Identities=19% Similarity=0.222 Sum_probs=117.1
Q ss_pred CCCCc-eecccceeehhh--hcc---ccchhhhhhhhhhhccccccccccCCCCCCCChhhHHHHHHHHHhCCCCCCCCC
Q 042825 7 HPSNF-QLFGFPRLTFRD--CMT---ATSELEREKTERVQGDRRKKRRKIPSASSNQSRPDAAVMQDLKASFVIPKRLKW 80 (631)
Q Consensus 7 ~~~~~-~~~~~~~~~~~~--~~~---~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~k~~~~~~~~~~w 80 (631)
+|+.| ++..++.|.+.+ ..+ +.....+.+|+.|++++|++++.+|......... +. ++-
T Consensus 68 ~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L--------~~-------L~L 132 (313)
T 1ogq_A 68 IPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTL--------VT-------LDF 132 (313)
T ss_dssp CCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTC--------CE-------EEC
T ss_pred cChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCC--------CE-------EeC
Confidence 55566 666666666652 222 2223355677777777777776666543322110 00 000
Q ss_pred CCCCCCCccceee---CCCCCeEEEEeCCCCCcccCcchhcCCc-cCceeecccCcccCCCCcCcc--cccccccccccc
Q 042825 81 SDPDPCQWSHVIC---SDDGQVTNIELQDQNRKGTVPPILKKLS-SMAVMYLENNQLRGPIPSLVG--SLEFFSAYEANI 154 (631)
Q Consensus 81 ~~~~~C~w~gv~C---~~~~~l~~l~l~~n~l~g~ip~~~~~l~-~L~~L~L~~N~l~g~lP~~~~--~L~~L~l~~n~l 154 (631)
..|...|... ....+++.|+|++|.++|.+|..++++. +|++|+|++|+++|.+|..+. +|+.|++++|++
T Consensus 133 ---s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~L~~L~Ls~N~l 209 (313)
T 1ogq_A 133 ---SYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLNLAFVDLSRNML 209 (313)
T ss_dssp ---CSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCCCSEEECCSSEE
T ss_pred ---CCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCcccEEECcCCcc
Confidence 0000000000 0123455566666666555555555555 556666666666555555544 355556666666
Q ss_pred eecCCCCCCcCCCCCCcEEEccCCcccccCCCCCCCCccCcCCCCCCCEEEeecCcCcccCChhhccCCCCCCEEEccCC
Q 042825 155 SGTIPDFIGTDTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNN 234 (631)
Q Consensus 155 ~g~ip~~~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~~~~~~~~l~~L~~L~L~~N~l~g~iP~~~~~~l~~L~~L~ls~N 234 (631)
++.+|..+. .+++|+.|+|++|++++.+|. +..+++|++|+|++|+++|.+|.. +..+++|+.|+|++|
T Consensus 210 ~~~~~~~~~--~l~~L~~L~L~~N~l~~~~~~--------~~~l~~L~~L~Ls~N~l~~~~p~~-l~~l~~L~~L~Ls~N 278 (313)
T 1ogq_A 210 EGDASVLFG--SDKNTQKIHLAKNSLAFDLGK--------VGLSKNLNGLDLRNNRIYGTLPQG-LTQLKFLHSLNVSFN 278 (313)
T ss_dssp EECCGGGCC--TTSCCSEEECCSSEECCBGGG--------CCCCTTCCEEECCSSCCEECCCGG-GGGCTTCCEEECCSS
T ss_pred cCcCCHHHh--cCCCCCEEECCCCceeeecCc--------ccccCCCCEEECcCCcccCcCChH-HhcCcCCCEEECcCC
Confidence 555555555 555666666666666544442 234566666666666666666643 556666666666666
Q ss_pred CCcccCCCCCCCCceEEeecCCCc-ccC
Q 042825 235 LLQGPTPRFNNSKLTVDMRTGSNC-FCL 261 (631)
Q Consensus 235 ~l~g~~p~~~~~~~~~~l~~~~n~-~~~ 261 (631)
+|+|.+|..........+++++|+ +||
T Consensus 279 ~l~~~ip~~~~l~~L~~l~l~~N~~lc~ 306 (313)
T 1ogq_A 279 NLCGEIPQGGNLQRFDVSAYANNKCLCG 306 (313)
T ss_dssp EEEEECCCSTTGGGSCGGGTCSSSEEES
T ss_pred cccccCCCCccccccChHHhcCCCCccC
Confidence 666666655333333334455554 555
|
| >4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.88 E-value=2.2e-22 Score=213.45 Aligned_cols=195 Identities=18% Similarity=0.280 Sum_probs=143.9
Q ss_pred cCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCC-CHHHHHHHHHHHHHHhc----------------------
Q 042825 417 TNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSV-TEQGIAQFESEITVLTK---------------------- 472 (631)
Q Consensus 417 t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~-~~~~~~~~~~Ei~~l~~---------------------- 472 (631)
.++|...+.||+|+||.||+|+.. +++.||+|++..... .....+.+.+|++++.+
T Consensus 14 ~~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv 93 (384)
T 4fr4_A 14 FDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMV 93 (384)
T ss_dssp GGGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEE
Confidence 357899999999999999999976 488999999975321 11234678899999876
Q ss_pred ------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCC
Q 042825 473 ------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPEN 522 (631)
Q Consensus 473 ------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~ 522 (631)
|+|..++.. ...+++.....++.+++.| +.+||+|||+++.+...
T Consensus 94 ~e~~~gg~L~~~l~~-----~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~ 168 (384)
T 4fr4_A 94 VDLLLGGDLRYHLQQ-----NVHFKEETVKLFICELVMALDYLQNQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRE 168 (384)
T ss_dssp ECCCTTEEHHHHHHT-----TCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTT
T ss_pred EecCCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEECCCCCEEEeccceeeeccCC
Confidence 455555532 3457888888888887765 56899999999876422
Q ss_pred CccccccccccCccccccccccc---CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHhHh----hhcCC
Q 042825 523 GKHSILTKVAGTFGYLAPEYIVT---GRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQK----MHKNH 595 (631)
Q Consensus 523 ~~~~~~~~~~gt~~Y~aPE~~~~---~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~~~----~~~~~ 595 (631)
......+||+.|+|||++.. ..|+.++|||||||++|||++|+.||.......... ........ ....+
T Consensus 169 ---~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~-~~~~~~~~~~~~p~~~s 244 (384)
T 4fr4_A 169 ---TQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKE-IVHTFETTVVTYPSAWS 244 (384)
T ss_dssp ---CCBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCHHH-HHHHHHHCCCCCCTTSC
T ss_pred ---CceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccHHH-HHHHHhhcccCCCCcCC
Confidence 23456789999999999864 358999999999999999999999997544332111 11111111 11224
Q ss_pred hhHHHHHHhhcCCChhhHHh-HHHHH
Q 042825 596 DTFQMAIDKTIQLDEENLAN-VSTVA 620 (631)
Q Consensus 596 ~~l~~~id~~L~~d~~~r~~-~~~vl 620 (631)
.++.+++.++|..||.+|++ +.++.
T Consensus 245 ~~~~~li~~lL~~dP~~R~s~~~~l~ 270 (384)
T 4fr4_A 245 QEMVSLLKKLLEPNPDQRFSQLSDVQ 270 (384)
T ss_dssp HHHHHHHHHHSCSSGGGSCCSHHHHH
T ss_pred HHHHHHHHHHhcCCHhHhcccHHHHH
Confidence 68999999999999999998 66554
|
| >3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=4.8e-22 Score=214.81 Aligned_cols=151 Identities=25% Similarity=0.309 Sum_probs=113.7
Q ss_pred hcCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc----------------------
Q 042825 416 ATNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK---------------------- 472 (631)
Q Consensus 416 ~t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~---------------------- 472 (631)
..++|...+.||+|+||.||+|+.. +++.||||++..........+++.+|++++.+
T Consensus 24 i~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~ 103 (432)
T 3n9x_A 24 VPDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFD 103 (432)
T ss_dssp CCTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCC
T ss_pred ecCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCC
Confidence 4568999999999999999999976 58899999998655555667889999999876
Q ss_pred ----------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccc
Q 042825 473 ----------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRL 518 (631)
Q Consensus 473 ----------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~ 518 (631)
|+|.+++. ....+++.+...++.++++| +.+||+|||+|+.
T Consensus 104 ~~~lv~e~~~~~L~~~~~-----~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~~kL~DFGla~~ 178 (432)
T 3n9x_A 104 ELYIVLEIADSDLKKLFK-----TPIFLTEEHIKTILYNLLLGENFIHESGIIHRDLKPANCLLNQDCSVKVCDFGLART 178 (432)
T ss_dssp CEEEEEECCSEEHHHHHH-----SSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred eEEEEEecCCcCHHHHHh-----ccCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHeEECCCCCEEEccCCCccc
Confidence 22222221 23458999999999888876 4689999999987
Q ss_pred cCCCCcc--------------------ccccccccCccccccccc-ccCCCCchhhHHHHHHHHHHHHcCCCCC
Q 042825 519 VPENGKH--------------------SILTKVAGTFGYLAPEYI-VTGRITAKVDVYSFGMILMDLITGRKVV 571 (631)
Q Consensus 519 ~~~~~~~--------------------~~~~~~~gt~~Y~aPE~~-~~~~~~~k~DVwS~GvvL~ElltG~~P~ 571 (631)
....... ...+..+||+.|+|||++ ....++.++||||+||++|||++|..||
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~ 252 (432)
T 3n9x_A 179 INSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSH 252 (432)
T ss_dssp C-------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTT
T ss_pred ccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhccccc
Confidence 6422111 123567899999999986 4566999999999999999999854443
|
| >2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... | Back alignment and structure |
|---|
Probab=99.87 E-value=5e-22 Score=210.29 Aligned_cols=197 Identities=17% Similarity=0.226 Sum_probs=137.2
Q ss_pred hcCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhcC---------------------
Q 042825 416 ATNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTKG--------------------- 473 (631)
Q Consensus 416 ~t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~g--------------------- 473 (631)
..++|...+.||+|+||.||+|+.. +++.||||++..........+++.+|+.++..-
T Consensus 23 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~ 102 (371)
T 2xrw_A 23 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEF 102 (371)
T ss_dssp EETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTC
T ss_pred hhhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeeccccccccc
Confidence 3568999999999999999999865 589999999987655566677889999988761
Q ss_pred ------------ChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeecccc
Q 042825 474 ------------TLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVR 517 (631)
Q Consensus 474 ------------sL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~ 517 (631)
++.+.+ ...+++.....++.+++.| +.+||+|||+++
T Consensus 103 ~~~~lv~e~~~~~l~~~~-------~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~ 175 (371)
T 2xrw_A 103 QDVYIVMELMDANLCQVI-------QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 175 (371)
T ss_dssp CEEEEEEECCSEEHHHHH-------HSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCCCC--
T ss_pred cceEEEEEcCCCCHHHHH-------hhccCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEEcCCCCEEEEEeeccc
Confidence 111111 1347888888888888765 468999999998
Q ss_pred ccCCCCccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHH------------
Q 042825 518 LVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLA------------ 585 (631)
Q Consensus 518 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~------------ 585 (631)
..... .......||+.|+|||++.+..++.++||||+||++|||++|+.||.+...... ...+.
T Consensus 176 ~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~-~~~i~~~~~~~~~~~~~ 251 (371)
T 2xrw_A 176 TAGTS---FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQ-WNKVIEQLGTPCPEFMK 251 (371)
T ss_dssp -----------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HHHHHC-CCCCCHHHHT
T ss_pred ccccc---cccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHHhCCCCHHHHH
Confidence 76321 223456799999999999998999999999999999999999999986532111 11110
Q ss_pred -------HHhHhh----------------hc--------CChhHHHHHHhhcCCChhhHHhHHHHHHHH
Q 042825 586 -------TWFQKM----------------HK--------NHDTFQMAIDKTIQLDEENLANVSTVAELG 623 (631)
Q Consensus 586 -------~~~~~~----------------~~--------~~~~l~~~id~~L~~d~~~r~~~~~vl~la 623 (631)
.+.... .+ .+.++.+++.+||..||.+|+++.++++--
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp 320 (371)
T 2xrw_A 252 KLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHP 320 (371)
T ss_dssp TSCHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHSH
T ss_pred HhhhHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCCc
Confidence 000000 00 024678999999999999999999988643
|
| >3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ... | Back alignment and structure |
|---|
Probab=99.87 E-value=4.4e-22 Score=210.13 Aligned_cols=199 Identities=21% Similarity=0.335 Sum_probs=146.5
Q ss_pred hcCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc----------------------
Q 042825 416 ATNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK---------------------- 472 (631)
Q Consensus 416 ~t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~---------------------- 472 (631)
..++|...+.||+|+||.||+|+.. +++.||||++.... .....+++.+|++++.+
T Consensus 25 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 103 (364)
T 3qyz_A 25 VGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFE-HQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMK 103 (364)
T ss_dssp CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTT-CHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCC
T ss_pred ccccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEecccc-CcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccc
Confidence 4568999999999999999999965 68899999997543 34456789999999876
Q ss_pred ----------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccc
Q 042825 473 ----------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRL 518 (631)
Q Consensus 473 ----------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~ 518 (631)
|+|.+++. . ..+++.....|+.+++.| +.+||+|||+++.
T Consensus 104 ~~~iv~e~~~~~L~~~l~----~--~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~ 177 (364)
T 3qyz_A 104 DVYIVQDLMETDLYKLLK----T--QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARV 177 (364)
T ss_dssp CEEEEEECCSEEHHHHHH----H--CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred eEEEEEcccCcCHHHHHH----h--CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChHhEEECCCCCEEEEeCcceEe
Confidence 22222221 1 357888888888888776 4689999999987
Q ss_pred cCCCCcc-ccccccccCcccccccccccC-CCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHH----------
Q 042825 519 VPENGKH-SILTKVAGTFGYLAPEYIVTG-RITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLAT---------- 586 (631)
Q Consensus 519 ~~~~~~~-~~~~~~~gt~~Y~aPE~~~~~-~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~---------- 586 (631)
....... .......||+.|+|||++.+. .++.++||||+||++|||++|+.||.+....... ..+..
T Consensus 178 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~-~~i~~~~~~~~~~~~ 256 (364)
T 3qyz_A 178 ADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQL-NHILGILGSPSQEDL 256 (364)
T ss_dssp CCGGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHH-HHHHHHHCSCCHHHH
T ss_pred cCCCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHH-HHHHHHhCCCCHHHH
Confidence 6422111 123456899999999987654 5899999999999999999999999865433211 11111
Q ss_pred ----------------------HhHhhhcCChhHHHHHHhhcCCChhhHHhHHHHHHH
Q 042825 587 ----------------------WFQKMHKNHDTFQMAIDKTIQLDEENLANVSTVAEL 622 (631)
Q Consensus 587 ----------------------~~~~~~~~~~~l~~~id~~L~~d~~~r~~~~~vl~l 622 (631)
|.......+.++.+++.+||..||.+|+++.++++-
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 314 (364)
T 3qyz_A 257 NCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 314 (364)
T ss_dssp HTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HHhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 011111235678999999999999999999998763
|
| >2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=99.87 E-value=1.1e-22 Score=221.84 Aligned_cols=197 Identities=22% Similarity=0.325 Sum_probs=148.0
Q ss_pred cCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCH-HHHHHHHHHHHHHhc----------------------
Q 042825 417 TNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTE-QGIAQFESEITVLTK---------------------- 472 (631)
Q Consensus 417 t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~-~~~~~~~~Ei~~l~~---------------------- 472 (631)
.++|...+.||+|+||.||+|+.. +|+.||||++....... ...+.+.+|+++++.
T Consensus 15 ~~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv 94 (476)
T 2y94_A 15 IGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMV 94 (476)
T ss_dssp ETTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred ecCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEE
Confidence 467899999999999999999976 69999999997532111 234678899999876
Q ss_pred ------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCC
Q 042825 473 ------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPEN 522 (631)
Q Consensus 473 ------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~ 522 (631)
|+|.+++. ....+++.....++.+++.| +.+||+|||+++.....
T Consensus 95 ~E~~~gg~L~~~l~-----~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~ 169 (476)
T 2y94_A 95 MEYVSGGELFDYIC-----KNGRLDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDG 169 (476)
T ss_dssp EECCSSEEHHHHTT-----SSSSCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEECTTCCEEECCCSSCEECCTT
T ss_pred EeCCCCCcHHHHHH-----hcCCCCHHHHHHHHHHHHHHHHHHHHCCCCcccccHHHEEEecCCCeEEEeccchhhcccc
Confidence 45555552 23468888888888888876 56899999999876422
Q ss_pred CccccccccccCcccccccccccCCC-CchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHh-HhhhcCChhHHH
Q 042825 523 GKHSILTKVAGTFGYLAPEYIVTGRI-TAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWF-QKMHKNHDTFQM 600 (631)
Q Consensus 523 ~~~~~~~~~~gt~~Y~aPE~~~~~~~-~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~-~~~~~~~~~l~~ 600 (631)
......+||+.|+|||++.+..+ +.++||||+||++|||++|+.||++..... ....+.... ......++++.+
T Consensus 170 ---~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~-~~~~i~~~~~~~p~~~s~~~~~ 245 (476)
T 2y94_A 170 ---EFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPT-LFKKICDGIFYTPQYLNPSVIS 245 (476)
T ss_dssp ---CCBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSHH-HHHHHHTTCCCCCTTCCHHHHH
T ss_pred ---ccccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHHH-HHHHHhcCCcCCCccCCHHHHH
Confidence 12345689999999999988765 689999999999999999999998654321 111111111 111123568999
Q ss_pred HHHhhcCCChhhHHhHHHHHHH
Q 042825 601 AIDKTIQLDEENLANVSTVAEL 622 (631)
Q Consensus 601 ~id~~L~~d~~~r~~~~~vl~l 622 (631)
++.++|..||.+|+++.++++-
T Consensus 246 Li~~~L~~dP~~Rpt~~eil~h 267 (476)
T 2y94_A 246 LLKHMLQVDPMKRATIKDIREH 267 (476)
T ss_dssp HHHHHTCSSTTTSCCHHHHHTC
T ss_pred HHHHHcCCCchhCcCHHHHHhC
Confidence 9999999999999999998763
|
| >3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group} | Back alignment and structure |
|---|
Probab=99.87 E-value=6.2e-22 Score=216.19 Aligned_cols=202 Identities=17% Similarity=0.204 Sum_probs=150.2
Q ss_pred hcCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc----------------------
Q 042825 416 ATNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK---------------------- 472 (631)
Q Consensus 416 ~t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~---------------------- 472 (631)
..++|...+.||+|+||.||+|+.. +++.||||++...... .++.+|++++..
T Consensus 5 i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~----~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~l 80 (483)
T 3sv0_A 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH----PQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVL 80 (483)
T ss_dssp ETTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCSS----CCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEE
T ss_pred cCCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEecccccc----HHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEE
Confidence 3468999999999999999999964 6999999998765432 346667776654
Q ss_pred ------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC---------------------------CCcEEEeecccccc
Q 042825 473 ------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG---------------------------DDMRVADFGLVRLV 519 (631)
Q Consensus 473 ------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g---------------------------~~~kl~DFGla~~~ 519 (631)
++|.+++.. ....+++.....|+.+++.| +.+||+|||+++..
T Consensus 81 vme~~g~sL~~ll~~----~~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~ 156 (483)
T 3sv0_A 81 VMDLLGPSLEDLFNF----CSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKY 156 (483)
T ss_dssp EEECCCCBHHHHHHH----TTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCGGGTTCEEECCCTTCEEC
T ss_pred EEECCCCCHHHHHHh----hcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCcceEEEecCCCCCeEEEEeCCcceec
Confidence 566666542 23468999999999888876 45789999999876
Q ss_pred CCCCcc-----ccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHhH-----
Q 042825 520 PENGKH-----SILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQ----- 589 (631)
Q Consensus 520 ~~~~~~-----~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~~----- 589 (631)
...... .......||..|+|||++.+..++.++|||||||+||||++|+.||.+....... ..+.....
T Consensus 157 ~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~-~~~~~i~~~~~~~ 235 (483)
T 3sv0_A 157 RDTSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKK-QKYEKISEKKVAT 235 (483)
T ss_dssp BCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHH-HHHHHHHHHHHHS
T ss_pred cCCccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHH-HHHHHHhhccccc
Confidence 532221 1123568999999999999999999999999999999999999999875443211 11111111
Q ss_pred ---hh-hcCChhHHHHHHhhcCCChhhHHhHHHHHHHHHhh
Q 042825 590 ---KM-HKNHDTFQMAIDKTIQLDEENLANVSTVAELGDHC 626 (631)
Q Consensus 590 ---~~-~~~~~~l~~~id~~L~~d~~~r~~~~~vl~lal~C 626 (631)
.. ....+++.+++..|+..+|++|+++.+++++....
T Consensus 236 ~~~~l~~~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l 276 (483)
T 3sv0_A 236 SIEALCRGYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDL 276 (483)
T ss_dssp CHHHHHTTSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHH
T ss_pred cHHHHhcCCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHH
Confidence 11 12356899999999999999999999888765443
|
| >1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A | Back alignment and structure |
|---|
Probab=99.87 E-value=1.3e-22 Score=223.09 Aligned_cols=201 Identities=20% Similarity=0.319 Sum_probs=153.2
Q ss_pred hcCCcccceeecCCCceEEEEEEecC-CcEEEEEEEecCCCCHHHHHHHHHHHHHHhc----------------------
Q 042825 416 ATNNFSEENRLGRGGVGTVYKGELKD-GTEVGVKRMELGSVTEQGIAQFESEITVLTK---------------------- 472 (631)
Q Consensus 416 ~t~~f~~~~~iG~G~fg~Vyk~~~~~-g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~---------------------- 472 (631)
..++|...+.||+|+||.||+|+++. +..||||+++.... ..++|.+|+++|.+
T Consensus 218 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv 294 (495)
T 1opk_A 218 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM---EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 294 (495)
T ss_dssp CGGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSSS---CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEE
T ss_pred CHHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCccc---chHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEE
Confidence 34578889999999999999999875 88999999976533 35779999999876
Q ss_pred ------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCC
Q 042825 473 ------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPEN 522 (631)
Q Consensus 473 ------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~ 522 (631)
|+|.+++.. .....+++..+..|+.+++.| +.+||+|||+++.....
T Consensus 295 ~E~~~~g~L~~~l~~---~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~ 371 (495)
T 1opk_A 295 TEFMTYGNLLDYLRE---CNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGD 371 (495)
T ss_dssp EECCTTCBHHHHHHH---SCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGGGCEEECCTTCEECCTTC
T ss_pred EEccCCCCHHHHHHh---cCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChhhEEECCCCcEEEeecccceeccCC
Confidence 677777753 233568899999999888876 45789999999976422
Q ss_pred CccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChHHHHHHHHHhH--hhhcCChhHH
Q 042825 523 GKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT-GRKVVDATHSDPEYIIHLATWFQ--KMHKNHDTFQ 599 (631)
Q Consensus 523 ~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~Ellt-G~~P~~~~~~~~~~~~~l~~~~~--~~~~~~~~l~ 599 (631)
.........+++.|+|||++....++.++|||||||++|||+| |+.||.+....... ..+..-.+ .....++++.
T Consensus 372 -~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~ 449 (495)
T 1opk_A 372 -TYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY-ELLEKDYRMERPEGCPEKVY 449 (495)
T ss_dssp -CEECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHH-HHHHTTCCCCCCTTCCHHHH
T ss_pred -ceeecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHHHHH-HHHHcCCCCCCCCCCCHHHH
Confidence 2222334567889999999998899999999999999999999 99999875443211 11111111 0112246899
Q ss_pred HHHHhhcCCChhhHHhHHHHHHHHH
Q 042825 600 MAIDKTIQLDEENLANVSTVAELGD 624 (631)
Q Consensus 600 ~~id~~L~~d~~~r~~~~~vl~lal 624 (631)
+++..|+..||.+||++.++++..-
T Consensus 450 ~li~~cl~~dP~~RPs~~el~~~L~ 474 (495)
T 1opk_A 450 ELMRACWQWNPSDRPSFAEIHQAFE 474 (495)
T ss_dssp HHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred HHHHHHcCcChhHCcCHHHHHHHHH
Confidence 9999999999999999999887543
|
| >3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A | Back alignment and structure |
|---|
Probab=99.87 E-value=2.9e-22 Score=215.59 Aligned_cols=200 Identities=19% Similarity=0.287 Sum_probs=140.2
Q ss_pred hhcCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCC------HHHHHHHHHHHHHHhc---------------
Q 042825 415 NATNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVT------EQGIAQFESEITVLTK--------------- 472 (631)
Q Consensus 415 ~~t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~------~~~~~~~~~Ei~~l~~--------------- 472 (631)
...++|...+.||+|+||+||+|+.. +++.||||++...... ......+.+|++++.+
T Consensus 132 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~ 211 (419)
T 3i6u_A 132 ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA 211 (419)
T ss_dssp HHHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEES
T ss_pred hhhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEec
Confidence 45678999999999999999999875 5899999999764321 1122358899998876
Q ss_pred ------------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC---------------------------CCcEEEee
Q 042825 473 ------------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG---------------------------DDMRVADF 513 (631)
Q Consensus 473 ------------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g---------------------------~~~kl~DF 513 (631)
|+|.+++. ....+++.....++.+++.| ..+||+||
T Consensus 212 ~~~~lv~e~~~~g~L~~~l~-----~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~NIll~~~~~~~~~kl~DF 286 (419)
T 3i6u_A 212 EDYYIVLELMEGGELFDKVV-----GNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDF 286 (419)
T ss_dssp SEEEEEEECCTTCBGGGGTS-----SSCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSSSCCEEECCS
T ss_pred CceEEEEEcCCCCcHHHHHh-----ccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEecCCCcceEEEeec
Confidence 44544442 23468888888888888776 13899999
Q ss_pred ccccccCCCCccccccccccCccccccccccc---CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHH----
Q 042825 514 GLVRLVPENGKHSILTKVAGTFGYLAPEYIVT---GRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLAT---- 586 (631)
Q Consensus 514 Gla~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~---~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~---- 586 (631)
|+++..... ......+||+.|+|||++.+ ..++.++|||||||++|||+||+.||............+..
T Consensus 287 G~a~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~i~~~~~~ 363 (419)
T 3i6u_A 287 GHSKILGET---SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYN 363 (419)
T ss_dssp STTTSCC--------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSCCHHHHHHTTCCC
T ss_pred ccceecCCC---ccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchHHHHHHHhcCCCC
Confidence 999976422 23345789999999999853 56889999999999999999999999764333211111111
Q ss_pred HhHhh-hcCChhHHHHHHhhcCCChhhHHhHHHHHHH
Q 042825 587 WFQKM-HKNHDTFQMAIDKTIQLDEENLANVSTVAEL 622 (631)
Q Consensus 587 ~~~~~-~~~~~~l~~~id~~L~~d~~~r~~~~~vl~l 622 (631)
+.... ...++.+.+++.+||..||.+|+++.++++-
T Consensus 364 ~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h 400 (419)
T 3i6u_A 364 FIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRH 400 (419)
T ss_dssp CCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred CCchhhcccCHHHHHHHHHHccCChhHCcCHHHHhCC
Confidence 01111 2235789999999999999999999998763
|
| >1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... | Back alignment and structure |
|---|
Probab=99.87 E-value=1.2e-22 Score=210.40 Aligned_cols=213 Identities=20% Similarity=0.283 Sum_probs=156.6
Q ss_pred HHHHhhcCCcccceeecCCCceEEEEEEec------CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc------------
Q 042825 411 QVLRNATNNFSEENRLGRGGVGTVYKGELK------DGTEVGVKRMELGSVTEQGIAQFESEITVLTK------------ 472 (631)
Q Consensus 411 ~~l~~~t~~f~~~~~iG~G~fg~Vyk~~~~------~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~------------ 472 (631)
++++...++|...+.||+|+||.||+|+.. +++.||||++.... ......++.+|++++.+
T Consensus 18 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~ 96 (322)
T 1p4o_A 18 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAA-SMRERIEFLNEASVMKEFNCHHVVRLLGV 96 (322)
T ss_dssp CTTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTS-CHHHHHHHHHHHHHGGGCCCTTBCCEEEE
T ss_pred hhhcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEeccccc-CHHHHHHHHHHHHHHHhcCCCCEeeeEEE
Confidence 344556788999999999999999999864 36789999997543 34556779999999876
Q ss_pred ----------------CChhHHhHhhhh-----cCCCCCCHHHHHHHHHHhhcC------------------------CC
Q 042825 473 ----------------GTLGRHLFNWEE-----EGLEPLEWNTRLNIALDVARG------------------------DD 507 (631)
Q Consensus 473 ----------------gsL~~~L~~~~~-----~~~~~L~~~~~~~I~~~ia~g------------------------~~ 507 (631)
|+|.+++..... .....+++.....++.+++.| +.
T Consensus 97 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~NIli~~~~~ 176 (322)
T 1p4o_A 97 VSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFT 176 (322)
T ss_dssp ECSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCSGGGEEECTTCC
T ss_pred EccCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHCCCccCCCccceEEEcCCCe
Confidence 678887764321 123457888888888888766 46
Q ss_pred cEEEeeccccccCCCCccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChHHHHHHHH
Q 042825 508 MRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT-GRKVVDATHSDPEYIIHLAT 586 (631)
Q Consensus 508 ~kl~DFGla~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~Ellt-G~~P~~~~~~~~~~~~~l~~ 586 (631)
+||+|||+++...............||+.|+|||++.+..++.++|||||||++|||+| |+.||....... ....+..
T Consensus 177 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~-~~~~~~~ 255 (322)
T 1p4o_A 177 VKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQ-VLRFVME 255 (322)
T ss_dssp EEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHH-HHHHHHT
T ss_pred EEECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCHHH-HHHHHHc
Confidence 89999999987643222222334567899999999998899999999999999999999 899997643211 1111110
Q ss_pred H--hHhhhcCChhHHHHHHhhcCCChhhHHhHHHHHHHHHh
Q 042825 587 W--FQKMHKNHDTFQMAIDKTIQLDEENLANVSTVAELGDH 625 (631)
Q Consensus 587 ~--~~~~~~~~~~l~~~id~~L~~d~~~r~~~~~vl~lal~ 625 (631)
. .......++.+.+++.+|+..||.+|+++.++++....
T Consensus 256 ~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~ 296 (322)
T 1p4o_A 256 GGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE 296 (322)
T ss_dssp TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGG
T ss_pred CCcCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHH
Confidence 0 00111234679999999999999999999999876443
|
| >2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.87 E-value=1.8e-22 Score=212.14 Aligned_cols=202 Identities=14% Similarity=0.157 Sum_probs=146.6
Q ss_pred cCCcccceeecCCCceEEEEEEecC---------CcEEEEEEEecCCCCHHHHHHHHHHHHHHhc---------------
Q 042825 417 TNNFSEENRLGRGGVGTVYKGELKD---------GTEVGVKRMELGSVTEQGIAQFESEITVLTK--------------- 472 (631)
Q Consensus 417 t~~f~~~~~iG~G~fg~Vyk~~~~~---------g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~--------------- 472 (631)
.++|...+.||+|+||.||+|+... ++.||||++.... .+.+|++++.+
T Consensus 41 ~~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~~-------~~~~E~~~l~~l~h~niv~~~~~~~~ 113 (352)
T 2jii_A 41 GRQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKDG-------RLFNEQNFFQRAAKPLQVNKWKKLYS 113 (352)
T ss_dssp SCEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETTS-------THHHHHHHHHHHCCHHHHHHHHHHTT
T ss_pred CCeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEecccc-------hHHHHHHHHHHhcccchhhhhhhhcc
Confidence 3679999999999999999999763 7899999997542 34445444432
Q ss_pred ----------------------------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC-------------------
Q 042825 473 ----------------------------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------- 505 (631)
Q Consensus 473 ----------------------------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------- 505 (631)
++|.+++... ....+++.....|+.+++.|
T Consensus 114 ~~~~~i~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~---~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NI 190 (352)
T 2jii_A 114 TPLLAIPTCMGFGVHQDKYRFLVLPSLGRSLQSALDVS---PKHVLSERSVLQVACRLLDALEFLHENEYVHGNVTAENI 190 (352)
T ss_dssp CTTCSCCCCCEEEEETTTEEEEEEECCCEEHHHHHHHS---GGGCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCGGGE
T ss_pred CCccCccchhhccccCCcEEEEEecCCCcCHHHHHHhC---CcCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHE
Confidence 4555555321 12568999999999998877
Q ss_pred -----C--CcEEEeeccccccCCCCcc-----ccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCC
Q 042825 506 -----D--DMRVADFGLVRLVPENGKH-----SILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDA 573 (631)
Q Consensus 506 -----~--~~kl~DFGla~~~~~~~~~-----~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~ 573 (631)
+ .+||+|||+++.+...... .......||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 191 l~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~ 270 (352)
T 2jii_A 191 FVDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTN 270 (352)
T ss_dssp EEETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGG
T ss_pred EEcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCccc
Confidence 2 6789999999876422111 112345899999999999998999999999999999999999999986
Q ss_pred CCCChHHHHHHHH-HhHhhh----------cCChhHHHHHHhhcCCChhhHHhHHHHHHHHHhhhc
Q 042825 574 THSDPEYIIHLAT-WFQKMH----------KNHDTFQMAIDKTIQLDEENLANVSTVAELGDHCCA 628 (631)
Q Consensus 574 ~~~~~~~~~~l~~-~~~~~~----------~~~~~l~~~id~~L~~d~~~r~~~~~vl~lal~C~~ 628 (631)
............. +..... ..+.++.+++..|+..||.+|+++.++++....+.+
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~ 336 (352)
T 2jii_A 271 CLPNTEDIMKQKQKFVDKPGPFVGPCGHWIRPSETLQKYLKVVMALTYEEKPPYAMLRNNLEALLQ 336 (352)
T ss_dssp GTTCHHHHHHHHHHHHHSCCCEECTTSCEECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHhccCChhhhhhhccccCCCcHHHHHHHHHHHhCChhhCCCHHHHHHHHHHHHH
Confidence 6534322222222 111110 125789999999999999999999999887665543
|
| >2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... | Back alignment and structure |
|---|
Probab=99.87 E-value=2.7e-22 Score=209.02 Aligned_cols=207 Identities=21% Similarity=0.298 Sum_probs=151.1
Q ss_pred cCCcccceeecCCCceEEEEEEec--------CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc----------------
Q 042825 417 TNNFSEENRLGRGGVGTVYKGELK--------DGTEVGVKRMELGSVTEQGIAQFESEITVLTK---------------- 472 (631)
Q Consensus 417 t~~f~~~~~iG~G~fg~Vyk~~~~--------~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~---------------- 472 (631)
.++|...+.||+|+||.||+|+.. ++..||||++.... .....+++.+|++++.+
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~ 112 (334)
T 2pvf_A 34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDA-TEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ 112 (334)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTC-CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred HhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCC-cHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEcc
Confidence 468899999999999999999863 46789999997543 44566788999988764
Q ss_pred -------------CChhHHhHhhhhc-----------CCCCCCHHHHHHHHHHhhcC-----------------------
Q 042825 473 -------------GTLGRHLFNWEEE-----------GLEPLEWNTRLNIALDVARG----------------------- 505 (631)
Q Consensus 473 -------------gsL~~~L~~~~~~-----------~~~~L~~~~~~~I~~~ia~g----------------------- 505 (631)
|+|.+++...... ....+++..+..++.+++.|
T Consensus 113 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~ 192 (334)
T 2pvf_A 113 DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTE 192 (334)
T ss_dssp SSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECT
T ss_pred CCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCccceEEEcC
Confidence 5777777542110 11348899999999888876
Q ss_pred -CCcEEEeeccccccCCCCccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChHHHHH
Q 042825 506 -DDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT-GRKVVDATHSDPEYIIH 583 (631)
Q Consensus 506 -~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~Ellt-G~~P~~~~~~~~~~~~~ 583 (631)
+.+||+|||+++...............+|+.|+|||++.+..++.++|||||||++|||+| |+.||.+....+ ....
T Consensus 193 ~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~-~~~~ 271 (334)
T 2pvf_A 193 NNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE-LFKL 271 (334)
T ss_dssp TCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCHHH-HHHH
T ss_pred CCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCHHH-HHHH
Confidence 5679999999987653322223344567899999999988889999999999999999999 999998653221 1111
Q ss_pred HHHHhH--hhhcCChhHHHHHHhhcCCChhhHHhHHHHHHHHHh
Q 042825 584 LATWFQ--KMHKNHDTFQMAIDKTIQLDEENLANVSTVAELGDH 625 (631)
Q Consensus 584 l~~~~~--~~~~~~~~l~~~id~~L~~d~~~r~~~~~vl~lal~ 625 (631)
+..... .....+.++.+++..|+..+|.+|+++.++++..-.
T Consensus 272 ~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~ 315 (334)
T 2pvf_A 272 LKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDR 315 (334)
T ss_dssp HHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred HhcCCCCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence 111110 111224689999999999999999999998875443
|
| >3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.87 E-value=2.5e-22 Score=208.79 Aligned_cols=203 Identities=22% Similarity=0.285 Sum_probs=141.9
Q ss_pred cCCcccceeecCCCceEEEEEEec-CCc----EEEEEEEecCCCCHHHHHHHHHHHHHHhc-------------------
Q 042825 417 TNNFSEENRLGRGGVGTVYKGELK-DGT----EVGVKRMELGSVTEQGIAQFESEITVLTK------------------- 472 (631)
Q Consensus 417 t~~f~~~~~iG~G~fg~Vyk~~~~-~g~----~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~------------------- 472 (631)
.++|+..+.||+|+||+||+|+.. +++ .||+|.+.... .....+++.+|+.++.+
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 92 (327)
T 3lzb_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT-SPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ 92 (327)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCS-SCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSSEE
T ss_pred HhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeecccc-CHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCCce
Confidence 357999999999999999999965 344 35778775433 23356789999999876
Q ss_pred --------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccC
Q 042825 473 --------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVP 520 (631)
Q Consensus 473 --------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~ 520 (631)
|+|.+++.. ....+++.....|+.+++.| +.+||+|||+++...
T Consensus 93 ~v~~~~~~g~L~~~l~~----~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~ 168 (327)
T 3lzb_A 93 LITQLMPFGCLLDYVRE----HKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLG 168 (327)
T ss_dssp EEECCCSSCBHHHHHHH----TTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETTEEEECCTTC-----
T ss_pred EEEEecCCCcHHHHHHh----cCCCCCHHHHHHHHHHHHHHHHHHhhCCCcCCCCCHHHEEEcCCCCEEEccCcceeEcc
Confidence 566665542 23468888888888888876 457899999998764
Q ss_pred CCCccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChHHHHHHHHHh--HhhhcCChh
Q 042825 521 ENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT-GRKVVDATHSDPEYIIHLATWF--QKMHKNHDT 597 (631)
Q Consensus 521 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~Ellt-G~~P~~~~~~~~~~~~~l~~~~--~~~~~~~~~ 597 (631)
............+|+.|+|||.+.+..++.++|||||||++|||++ |+.||.+....... ..+.... ......+.+
T Consensus 169 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 247 (327)
T 3lzb_A 169 AEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS-SILEKGERLPQPPICTID 247 (327)
T ss_dssp -----------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHH-HHHHTTCCCCCCTTBCHH
T ss_pred CccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH-HHHHcCCCCCCCccCCHH
Confidence 3333233344567889999999999999999999999999999999 99999876443211 1111110 011122467
Q ss_pred HHHHHHhhcCCChhhHHhHHHHHHHHHh
Q 042825 598 FQMAIDKTIQLDEENLANVSTVAELGDH 625 (631)
Q Consensus 598 l~~~id~~L~~d~~~r~~~~~vl~lal~ 625 (631)
+.+++.+|+..||.+|+++.++++....
T Consensus 248 l~~li~~~l~~dp~~Rps~~ell~~L~~ 275 (327)
T 3lzb_A 248 VYMIMRKCWMIDADSRPKFRELIIEFSK 275 (327)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred HHHHHHHHcCCChhHCcCHHHHHHHHHH
Confidence 9999999999999999999998875443
|
| >1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C | Back alignment and structure |
|---|
Probab=99.87 E-value=4.1e-22 Score=213.11 Aligned_cols=193 Identities=16% Similarity=0.215 Sum_probs=133.9
Q ss_pred cCCcccc-eeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc----------------------
Q 042825 417 TNNFSEE-NRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK---------------------- 472 (631)
Q Consensus 417 t~~f~~~-~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~---------------------- 472 (631)
.++|... ++||+|+||+||+|+.. +|+.||||++... ..+.+|++++.+
T Consensus 60 ~~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~-------~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~ 132 (400)
T 1nxk_A 60 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-------PKARREVELHWRASQCPHIVRIVDVYENLYAGRK 132 (400)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEE
T ss_pred cccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcc-------hhHHHHHHHHHHhcCCCCcceEeEEEeecccCCc
Confidence 3466665 68999999999999976 5899999999642 235566665422
Q ss_pred -----------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC---------------------------CCcEEEeec
Q 042825 473 -----------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG---------------------------DDMRVADFG 514 (631)
Q Consensus 473 -----------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g---------------------------~~~kl~DFG 514 (631)
|+|.+++.. .....+++.....|+.+++.| +.+||+|||
T Consensus 133 ~~~lv~E~~~gg~L~~~l~~---~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~~~~kl~DFG 209 (400)
T 1nxk_A 133 CLLIVMECLDGGELFSRIQD---RGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFG 209 (400)
T ss_dssp EEEEEEECCCSEEHHHHHHC---C---CCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSTTCCEEECCCT
T ss_pred EEEEEEEeCCCCcHHHHHHH---hCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCcCcceEEEecCCCCccEEEEecc
Confidence 455555532 223458899999898888775 347999999
Q ss_pred cccccCCCCccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChH---HHHHHHHHhHh-
Q 042825 515 LVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPE---YIIHLATWFQK- 590 (631)
Q Consensus 515 la~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~---~~~~l~~~~~~- 590 (631)
+++..... ......+||+.|+|||++.+..|+.++|||||||++|||++|+.||........ ....+......
T Consensus 210 ~a~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i~~~~~~~ 286 (400)
T 1nxk_A 210 FAKETTSH---NSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEF 286 (400)
T ss_dssp TCEECC--------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHHHHTCCCC
T ss_pred cccccCCC---CccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHHHcCcccC
Confidence 99876421 223457899999999999999999999999999999999999999976533210 11111111000
Q ss_pred ----hhcCChhHHHHHHhhcCCChhhHHhHHHHHHH
Q 042825 591 ----MHKNHDTFQMAIDKTIQLDEENLANVSTVAEL 622 (631)
Q Consensus 591 ----~~~~~~~l~~~id~~L~~d~~~r~~~~~vl~l 622 (631)
....++++.++|.+||..||.+|+++.++++-
T Consensus 287 ~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~h 322 (400)
T 1nxk_A 287 PNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH 322 (400)
T ss_dssp CTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred CCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 01235689999999999999999999998864
|
| >1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A | Back alignment and structure |
|---|
Probab=99.87 E-value=3.3e-22 Score=217.18 Aligned_cols=193 Identities=22% Similarity=0.322 Sum_probs=147.3
Q ss_pred hcCCcccceeecCCCceEEEEEEecCCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc-----------------------
Q 042825 416 ATNNFSEENRLGRGGVGTVYKGELKDGTEVGVKRMELGSVTEQGIAQFESEITVLTK----------------------- 472 (631)
Q Consensus 416 ~t~~f~~~~~iG~G~fg~Vyk~~~~~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~----------------------- 472 (631)
..++|...+.||+|+||.||+|.+. |+.||||+++... ..++|.+|+++|.+
T Consensus 191 ~~~~~~~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv 265 (450)
T 1k9a_A 191 NMKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA----TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIV 265 (450)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEET-TEEEEEEEESSCT----TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEE
T ss_pred ChHHeEEEeeecCcCCeeEEEEEec-CCeEEEEEeCCch----HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEE
Confidence 3467888999999999999999985 7899999997643 34679999999876
Q ss_pred ------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCC
Q 042825 473 ------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPEN 522 (631)
Q Consensus 473 ------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~ 522 (631)
|+|.+++.. .....+++.....++.+++.| +.+||+|||+++.....
T Consensus 266 ~e~~~~g~L~~~l~~---~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~ 342 (450)
T 1k9a_A 266 TEYMAKGSLVDYLRS---RGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST 342 (450)
T ss_dssp EECCTTCBHHHHHHH---HCTTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTSCEEECCCTTCEECC--
T ss_pred EEecCCCcHHHHHHh---cCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEECCCCCEEEeeCCCccccccc
Confidence 577777753 233457888899999888876 46799999999865311
Q ss_pred CccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChHHHHHHHHHhHh--hhcCChhHH
Q 042825 523 GKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT-GRKVVDATHSDPEYIIHLATWFQK--MHKNHDTFQ 599 (631)
Q Consensus 523 ~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~Ellt-G~~P~~~~~~~~~~~~~l~~~~~~--~~~~~~~l~ 599 (631)
.....+++.|+|||++.+..++.++|||||||++|||+| |+.||......+.. ..+..-.+. ....++++.
T Consensus 343 -----~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~-~~i~~~~~~~~p~~~~~~l~ 416 (450)
T 1k9a_A 343 -----QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVV-PRVEKGYKMDAPDGCPPAVY 416 (450)
T ss_dssp ---------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTTHH-HHHHTTCCCCCCTTCCHHHH
T ss_pred -----ccCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHH-HHHHcCCCCCCCCcCCHHHH
Confidence 122367899999999999999999999999999999999 99999876544321 111111111 112246899
Q ss_pred HHHHhhcCCChhhHHhHHHHHHH
Q 042825 600 MAIDKTIQLDEENLANVSTVAEL 622 (631)
Q Consensus 600 ~~id~~L~~d~~~r~~~~~vl~l 622 (631)
+++.+|+..||.+||++.++++.
T Consensus 417 ~li~~cl~~dp~~Rpt~~~l~~~ 439 (450)
T 1k9a_A 417 DVMKNCWHLDAATRPTFLQLREQ 439 (450)
T ss_dssp HHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHHHcCCChhHCcCHHHHHHH
Confidence 99999999999999999988764
|
| >3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=3e-22 Score=201.36 Aligned_cols=201 Identities=21% Similarity=0.317 Sum_probs=150.2
Q ss_pred CCcccceeecCCCceEEEEEEecCCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc-------------------------
Q 042825 418 NNFSEENRLGRGGVGTVYKGELKDGTEVGVKRMELGSVTEQGIAQFESEITVLTK------------------------- 472 (631)
Q Consensus 418 ~~f~~~~~iG~G~fg~Vyk~~~~~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~------------------------- 472 (631)
++|...+.||+|+||.||+|+..+++.||+|++...... .+++.+|++++.+
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~~---~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 84 (267)
T 3t9t_A 8 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMS---EEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEF 84 (267)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTBC---HHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECC
T ss_pred hheeeeeEecCCCceeEEEEEecCCCeEEEEEccccCCC---HHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeC
Confidence 578889999999999999999988899999999865433 3678899998876
Q ss_pred ---CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCCcc
Q 042825 473 ---GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENGKH 525 (631)
Q Consensus 473 ---gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~~~ 525 (631)
++|.+++.. ....+++.....++.+++.+ +.+||+|||+++.... ...
T Consensus 85 ~~~~~L~~~~~~----~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~-~~~ 159 (267)
T 3t9t_A 85 MEHGCLSDYLRT----QRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLD-DQY 159 (267)
T ss_dssp CTTCBHHHHHHH----TTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECGGGCEEECCTTGGGGBCC-HHH
T ss_pred CCCCcHHHHHhh----CcccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEECCCCCEEEccccccccccc-ccc
Confidence 566666642 23457888888888888765 4578999999987632 111
Q ss_pred ccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChHHHHHHHHHhHh--hhcCChhHHHHH
Q 042825 526 SILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT-GRKVVDATHSDPEYIIHLATWFQK--MHKNHDTFQMAI 602 (631)
Q Consensus 526 ~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~Ellt-G~~P~~~~~~~~~~~~~l~~~~~~--~~~~~~~l~~~i 602 (631)
.......+|..|+|||.+.+..++.++||||+|+++|||++ |+.||....... ....+...... ....+.++.+++
T Consensus 160 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~-~~~~i~~~~~~~~~~~~~~~l~~li 238 (267)
T 3t9t_A 160 TSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE-VVEDISTGFRLYKPRLASTHVYQIM 238 (267)
T ss_dssp HSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH-HHHHHHTTCCCCCCTTSCHHHHHHH
T ss_pred cccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHHH-HHHHHhcCCcCCCCccCcHHHHHHH
Confidence 22334567889999999988899999999999999999999 899998643211 11111111000 111246799999
Q ss_pred HhhcCCChhhHHhHHHHHHHHHhhh
Q 042825 603 DKTIQLDEENLANVSTVAELGDHCC 627 (631)
Q Consensus 603 d~~L~~d~~~r~~~~~vl~lal~C~ 627 (631)
.+|+..||.+|+++.++++......
T Consensus 239 ~~~l~~~p~~Rps~~~ll~~L~~l~ 263 (267)
T 3t9t_A 239 NHCWRERPEDRPAFSRLLRQLAEIA 263 (267)
T ss_dssp HHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHccCChhhCcCHHHHHHHHHHHH
Confidence 9999999999999999988655443
|
| >3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=3.2e-22 Score=201.40 Aligned_cols=197 Identities=15% Similarity=0.169 Sum_probs=146.7
Q ss_pred cCCcccceeecCCCceEEEEEEecCCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc------------------------
Q 042825 417 TNNFSEENRLGRGGVGTVYKGELKDGTEVGVKRMELGSVTEQGIAQFESEITVLTK------------------------ 472 (631)
Q Consensus 417 t~~f~~~~~iG~G~fg~Vyk~~~~~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~------------------------ 472 (631)
.++|...+.||+|+||.||+|+.+ ++.||||++..........++|.+|++++.+
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv 87 (271)
T 3kmu_A 9 FKQLNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLI 87 (271)
T ss_dssp GGGCEEEEEEEEETTEEEEEEEET-TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEE
T ss_pred HHHhHHHHHhcCCCcceEEEEEEC-CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEee
Confidence 357888999999999999999985 8899999998776666677889999998875
Q ss_pred ------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC--------------------------CCcEEEeeccccccC
Q 042825 473 ------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG--------------------------DDMRVADFGLVRLVP 520 (631)
Q Consensus 473 ------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g--------------------------~~~kl~DFGla~~~~ 520 (631)
|+|.+++.. .....+++.....++.+++.| +.++|+|||++....
T Consensus 88 ~e~~~~~~L~~~l~~---~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~ 164 (271)
T 3kmu_A 88 THWMPYGSLYNVLHE---GTNFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVMIDEDMTARISMADVKFSFQ 164 (271)
T ss_dssp EECCTTCBHHHHHHS---CSSCCCCHHHHHHHHHHHHHHHHHHTTSSSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTS
T ss_pred ecccCCCcHHHHHhh---cccCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCccceEEEcCCcceeEEeccceeeec
Confidence 566666642 222358999999998888765 345788888875432
Q ss_pred CCCccccccccccCcccccccccccCCCCc---hhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHhHh--hhcCC
Q 042825 521 ENGKHSILTKVAGTFGYLAPEYIVTGRITA---KVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQK--MHKNH 595 (631)
Q Consensus 521 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~---k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~~~--~~~~~ 595 (631)
.....||+.|+|||.+.+..++. ++|||||||++|||++|+.||................... ....+
T Consensus 165 -------~~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (271)
T 3kmu_A 165 -------SPGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMKVALEGLRPTIPPGIS 237 (271)
T ss_dssp -------CTTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHHHHHHHHSCCCCCCCTTCC
T ss_pred -------ccCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHHHHHHHHhcCCCCCCCCCCC
Confidence 12356899999999998765444 8999999999999999999998653221111111111011 11235
Q ss_pred hhHHHHHHhhcCCChhhHHhHHHHHHHHH
Q 042825 596 DTFQMAIDKTIQLDEENLANVSTVAELGD 624 (631)
Q Consensus 596 ~~l~~~id~~L~~d~~~r~~~~~vl~lal 624 (631)
+++.+++..|+..||.+|+++.++++..-
T Consensus 238 ~~~~~li~~~l~~~p~~Rps~~~il~~L~ 266 (271)
T 3kmu_A 238 PHVSKLMKICMNEDPAKRPKFDMIVPILE 266 (271)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred HHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 68999999999999999999999887543
|
| >3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=3.2e-22 Score=204.88 Aligned_cols=195 Identities=18% Similarity=0.256 Sum_probs=137.2
Q ss_pred hcCCcccceeecCCCceEEEEEEecCCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc-----------------------
Q 042825 416 ATNNFSEENRLGRGGVGTVYKGELKDGTEVGVKRMELGSVTEQGIAQFESEITVLTK----------------------- 472 (631)
Q Consensus 416 ~t~~f~~~~~iG~G~fg~Vyk~~~~~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~----------------------- 472 (631)
..++|...+.||+|+||+||+|+. +|+.||||++... ....+.+|.+++..
T Consensus 6 ~~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~-----~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~ 79 (301)
T 3q4u_A 6 VARDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSR-----DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSST 79 (301)
T ss_dssp CGGGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGG-----GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEE
T ss_pred ccCcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEeccc-----cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCc
Confidence 356899999999999999999988 6899999998653 23445555555432
Q ss_pred -----------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC--------------------------------CCcE
Q 042825 473 -----------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG--------------------------------DDMR 509 (631)
Q Consensus 473 -----------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g--------------------------------~~~k 509 (631)
|+|.+++. ...+++.....|+.+++.| +.+|
T Consensus 80 ~~~lv~e~~~~g~L~~~l~------~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill~~~~~~k 153 (301)
T 3q4u_A 80 QLWLITHYHEMGSLYDYLQ------LTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCC 153 (301)
T ss_dssp EEEEEECCCTTCBHHHHHT------TCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGGEEECTTSCEE
T ss_pred eeEEehhhccCCCHHHHHh------hcccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHhEEEcCCCCEE
Confidence 45555552 2357888888887776543 4578
Q ss_pred EEeeccccccCCCCccc--cccccccCcccccccccccC------CCCchhhHHHHHHHHHHHHcC----------CCCC
Q 042825 510 VADFGLVRLVPENGKHS--ILTKVAGTFGYLAPEYIVTG------RITAKVDVYSFGMILMDLITG----------RKVV 571 (631)
Q Consensus 510 l~DFGla~~~~~~~~~~--~~~~~~gt~~Y~aPE~~~~~------~~~~k~DVwS~GvvL~ElltG----------~~P~ 571 (631)
|+|||+++......... ......||+.|+|||++.+. .++.++|||||||++|||+|| +.||
T Consensus 154 l~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf 233 (301)
T 3q4u_A 154 IADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPF 233 (301)
T ss_dssp ECCCTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTT
T ss_pred EeeCCCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccc
Confidence 99999998764322211 12345799999999999876 456799999999999999999 8888
Q ss_pred CCCCCChHHHHHHHHHhHhh-----hc-------CChhHHHHHHhhcCCChhhHHhHHHHHHH
Q 042825 572 DATHSDPEYIIHLATWFQKM-----HK-------NHDTFQMAIDKTIQLDEENLANVSTVAEL 622 (631)
Q Consensus 572 ~~~~~~~~~~~~l~~~~~~~-----~~-------~~~~l~~~id~~L~~d~~~r~~~~~vl~l 622 (631)
............+....... .+ ...++.+++.+|+..||.+|+++.++++.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~ 296 (301)
T 3q4u_A 234 YDVVPNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKT 296 (301)
T ss_dssp TTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHH
T ss_pred cccCCCCcchhhhhHHHhccCCCCCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHH
Confidence 65433221112222211000 00 11468999999999999999999998875
|
| >1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=1.5e-22 Score=205.45 Aligned_cols=203 Identities=18% Similarity=0.233 Sum_probs=139.7
Q ss_pred hcCCcccceeecCCCceEEEEEEecC----CcEEEEEEEecCCCCHHHHHHHHHHHHHHhc-------------------
Q 042825 416 ATNNFSEENRLGRGGVGTVYKGELKD----GTEVGVKRMELGSVTEQGIAQFESEITVLTK------------------- 472 (631)
Q Consensus 416 ~t~~f~~~~~iG~G~fg~Vyk~~~~~----g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~------------------- 472 (631)
..++|+..+.||+|+||.||+|+... +..||+|++.... .....+.+.+|+.++.+
T Consensus 13 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~ 91 (281)
T 1mp8_A 13 QRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCT-SDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVW 91 (281)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTT-SHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSCE
T ss_pred ehHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccC-CHHHHHHHHHHHHHHHhCCCCccceEEEEEccCccE
Confidence 34678899999999999999998643 5579999986543 34566789999999876
Q ss_pred --------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccC
Q 042825 473 --------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVP 520 (631)
Q Consensus 473 --------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~ 520 (631)
|+|.+++. .....+++.....++.+++.| +.+||+|||+++...
T Consensus 92 lv~e~~~~~~L~~~l~----~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 167 (281)
T 1mp8_A 92 IIMELCTLGELRSFLQ----VRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYME 167 (281)
T ss_dssp EEEECCTTEEHHHHHH----HTTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECC--------
T ss_pred EEEecCCCCCHHHHHH----hcCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHEEECCCCCEEECccccccccC
Confidence 35555553 223468899998888888766 457899999998764
Q ss_pred CCCccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChHHHHHHHHHh--HhhhcCChh
Q 042825 521 ENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT-GRKVVDATHSDPEYIIHLATWF--QKMHKNHDT 597 (631)
Q Consensus 521 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~Ellt-G~~P~~~~~~~~~~~~~l~~~~--~~~~~~~~~ 597 (631)
... ........+|+.|+|||.+....++.++|||||||++|||++ |+.||.+...... ...+.... ......+++
T Consensus 168 ~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~~-~~~i~~~~~~~~~~~~~~~ 245 (281)
T 1mp8_A 168 DST-YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDV-IGRIENGERLPMPPNCPPT 245 (281)
T ss_dssp ------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGH-HHHHHTTCCCCCCTTCCHH
T ss_pred ccc-ccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHHH-HHHHHcCCCCCCCCCCCHH
Confidence 221 112234567889999999998899999999999999999997 9999986544321 11111110 011123468
Q ss_pred HHHHHHhhcCCChhhHHhHHHHHHHHHh
Q 042825 598 FQMAIDKTIQLDEENLANVSTVAELGDH 625 (631)
Q Consensus 598 l~~~id~~L~~d~~~r~~~~~vl~lal~ 625 (631)
+.+++.+|+..||.+|+++.++++..-.
T Consensus 246 l~~li~~~l~~~p~~Rps~~~l~~~l~~ 273 (281)
T 1mp8_A 246 LYSLMTKCWAYDPSRRPRFTELKAQLST 273 (281)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred HHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence 9999999999999999999998876543
|
| >3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ... | Back alignment and structure |
|---|
Probab=99.87 E-value=1.2e-21 Score=200.17 Aligned_cols=203 Identities=22% Similarity=0.385 Sum_probs=144.4
Q ss_pred cCCcccceeecCCCceEEEEEEec-----CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc-------------------
Q 042825 417 TNNFSEENRLGRGGVGTVYKGELK-----DGTEVGVKRMELGSVTEQGIAQFESEITVLTK------------------- 472 (631)
Q Consensus 417 t~~f~~~~~iG~G~fg~Vyk~~~~-----~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~------------------- 472 (631)
.++|+..+.||+|+||+||+|++. +++.||||++... .....++|.+|++++.+
T Consensus 9 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 86 (295)
T 3ugc_A 9 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS--TEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRR 86 (295)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCC--CHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHT
T ss_pred HHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccC--CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCC
Confidence 357889999999999999999852 5889999999754 34566789999999876
Q ss_pred -----------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeecccc
Q 042825 473 -----------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVR 517 (631)
Q Consensus 473 -----------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~ 517 (631)
|+|.+++.. ....+++.....++.+++.| +.+||+|||+++
T Consensus 87 ~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~~~ 162 (295)
T 3ugc_A 87 NLKLIMEYLPYGSLRDYLQK----HKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTK 162 (295)
T ss_dssp SCEEEEECCTTCBHHHHHHH----CGGGCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCCCSCC
T ss_pred ceEEEEEeCCCCCHHHHHHh----cccccCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHhhEEEcCCCeEEEccCcccc
Confidence 455555542 22358888899898888876 457899999998
Q ss_pred ccCCCCcc-ccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCC-----------hHHHHHHH
Q 042825 518 LVPENGKH-SILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSD-----------PEYIIHLA 585 (631)
Q Consensus 518 ~~~~~~~~-~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~-----------~~~~~~l~ 585 (631)
........ .......++..|+|||.+.+..++.++|||||||++|||+||..|+...... ......+.
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (295)
T 3ugc_A 163 VLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLI 242 (295)
T ss_dssp -------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHHHH
T ss_pred cccCCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHHHHH
Confidence 76432211 1223456788899999999999999999999999999999999998642110 00000111
Q ss_pred HHhHh------hhcCChhHHHHHHhhcCCChhhHHhHHHHHHHHHh
Q 042825 586 TWFQK------MHKNHDTFQMAIDKTIQLDEENLANVSTVAELGDH 625 (631)
Q Consensus 586 ~~~~~------~~~~~~~l~~~id~~L~~d~~~r~~~~~vl~lal~ 625 (631)
..... ....++++.+++.+|+..||.+||++.++++....
T Consensus 243 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~ 288 (295)
T 3ugc_A 243 ELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQ 288 (295)
T ss_dssp HHHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHH
T ss_pred HHHhccCcCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHH
Confidence 11111 01124679999999999999999999998875443
|
| >2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.87 E-value=8.9e-22 Score=202.72 Aligned_cols=197 Identities=22% Similarity=0.356 Sum_probs=138.2
Q ss_pred CCcccceeecCCCceEEEEEEecCCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc-------------------------
Q 042825 418 NNFSEENRLGRGGVGTVYKGELKDGTEVGVKRMELGSVTEQGIAQFESEITVLTK------------------------- 472 (631)
Q Consensus 418 ~~f~~~~~iG~G~fg~Vyk~~~~~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~------------------------- 472 (631)
++|+..+.||+|+||+||+|+.. ++.||||++... ...+.|.+|++++.+
T Consensus 8 ~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~----~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~lv~e~~~ 82 (307)
T 2eva_A 8 KEIEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIESE----SERKAFIVELRQLSRVNHPNIVKLYGACLNPVCLVMEYAE 82 (307)
T ss_dssp GGEEEEEEEECCSSSEEEEEEET-TEEEEEEECSST----THHHHHHHHHHHHHHCCCTTBCCEEEBCTTTTEEEEECCT
T ss_pred hHeeeeeEeecCCCceEEEEEEC-CeeEEEEEecCh----hHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCcEEEEEcCC
Confidence 46888999999999999999985 788999998643 245789999998875
Q ss_pred -CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC---------------------------CC-cEEEeeccccccCCCC
Q 042825 473 -GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG---------------------------DD-MRVADFGLVRLVPENG 523 (631)
Q Consensus 473 -gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g---------------------------~~-~kl~DFGla~~~~~~~ 523 (631)
|+|.+++... .....+.+...+.++.++++| +. +||+|||+++.....
T Consensus 83 ~~~L~~~l~~~--~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~- 159 (307)
T 2eva_A 83 GGSLYNVLHGA--EPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH- 159 (307)
T ss_dssp TCBHHHHHHCS--SSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC--------
T ss_pred CCCHHHHHhcc--CCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccccccc-
Confidence 5666666421 112246777777776665543 22 689999999865311
Q ss_pred ccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHH-hH--hhhcCChhHHH
Q 042825 524 KHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATW-FQ--KMHKNHDTFQM 600 (631)
Q Consensus 524 ~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~-~~--~~~~~~~~l~~ 600 (631)
.....||+.|+|||++.+..++.++|||||||++|||+||+.||+............... .. .....+..+.+
T Consensus 160 ----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 235 (307)
T 2eva_A 160 ----MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPLIKNLPKPIES 235 (307)
T ss_dssp ---------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHHHHHHHHTTCCCCCBTTCCHHHHH
T ss_pred ----cccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHHHHHHHHhcCCCCCcccccCHHHHH
Confidence 234569999999999999899999999999999999999999998654432111110000 00 01122468999
Q ss_pred HHHhhcCCChhhHHhHHHHHHHHHhh
Q 042825 601 AIDKTIQLDEENLANVSTVAELGDHC 626 (631)
Q Consensus 601 ~id~~L~~d~~~r~~~~~vl~lal~C 626 (631)
++.+|+..||.+|+++.++++.....
T Consensus 236 li~~~l~~dp~~Rps~~ell~~L~~~ 261 (307)
T 2eva_A 236 LMTRCWSKDPSQRPSMEEIVKIMTHL 261 (307)
T ss_dssp HHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred HHHHHhcCChhhCcCHHHHHHHHHHH
Confidence 99999999999999999998865443
|
| >3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B | Back alignment and structure |
|---|
Probab=99.87 E-value=1.4e-22 Score=223.69 Aligned_cols=197 Identities=21% Similarity=0.332 Sum_probs=145.1
Q ss_pred cCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCH-HHHHHHHHHHHHHhc----------------------
Q 042825 417 TNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTE-QGIAQFESEITVLTK---------------------- 472 (631)
Q Consensus 417 t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~-~~~~~~~~Ei~~l~~---------------------- 472 (631)
.++|...++||+|+||.||+|+.+ +|+.||||++....... ...+.+.+|++++.+
T Consensus 184 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV 263 (543)
T 3c4z_A 184 EDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLV 263 (543)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEE
Confidence 367899999999999999999976 59999999997542211 234668889988875
Q ss_pred ------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCC
Q 042825 473 ------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPEN 522 (631)
Q Consensus 473 ------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~ 522 (631)
|+|..++.... .....+++.....++.+++.| +.+||+|||+++.+...
T Consensus 264 mE~~~gg~L~~~l~~~~-~~~~~l~e~~~~~~~~qi~~aL~~LH~~gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~~~ 342 (543)
T 3c4z_A 264 MTIMNGGDIRYHIYNVD-EDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAG 342 (543)
T ss_dssp ECCCTTCBHHHHHHTSS-TTSCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCTTCEECCTT
T ss_pred EEeccCCCHHHHHHHhh-cccccccHHHHHHHHHHHHHHHHHHHHcCCcccCCChHHEEEeCCCCEEEeecceeeeccCC
Confidence 67777765321 113468888888888887765 57899999999876432
Q ss_pred CccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCh--HHH-HHHHHHh-HhhhcCChhH
Q 042825 523 GKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDP--EYI-IHLATWF-QKMHKNHDTF 598 (631)
Q Consensus 523 ~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~--~~~-~~l~~~~-~~~~~~~~~l 598 (631)
. ......+||+.|+|||++.+..|+.++|||||||++|||+||+.||....... ... ..+.... ......+.++
T Consensus 343 ~--~~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~~~~~~~~i~~~~~~~p~~~s~~~ 420 (543)
T 3c4z_A 343 Q--TKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDKFSPAS 420 (543)
T ss_dssp C--CCBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCCHHHHHHHHHHCCCCCCTTSCHHH
T ss_pred C--cccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccchhHHHHHHHHhhcccCCCcccCHHH
Confidence 2 22345689999999999999999999999999999999999999998653321 111 1111110 1111235789
Q ss_pred HHHHHhhcCCChhhHHhH
Q 042825 599 QMAIDKTIQLDEENLANV 616 (631)
Q Consensus 599 ~~~id~~L~~d~~~r~~~ 616 (631)
.++|.++|..||.+|+++
T Consensus 421 ~~li~~lL~~dP~~R~~~ 438 (543)
T 3c4z_A 421 KDFCEALLQKDPEKRLGF 438 (543)
T ss_dssp HHHHHHHSCSSGGGSCCC
T ss_pred HHHHHHhccCCHhHCCCC
Confidence 999999999999999854
|
| >2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=2.2e-22 Score=222.77 Aligned_cols=200 Identities=24% Similarity=0.381 Sum_probs=148.9
Q ss_pred hcCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCC-HHHHHHHHHHHHHHhc---------------------
Q 042825 416 ATNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVT-EQGIAQFESEITVLTK--------------------- 472 (631)
Q Consensus 416 ~t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~-~~~~~~~~~Ei~~l~~--------------------- 472 (631)
..++|...++||+|+||.||+|+.. +|+.||||++...... ......+.+|++++.+
T Consensus 182 ~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~l 261 (576)
T 2acx_A 182 TKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCL 261 (576)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred cccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEE
Confidence 3467999999999999999999976 6999999999753211 1234567889998875
Q ss_pred -------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCC
Q 042825 473 -------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPE 521 (631)
Q Consensus 473 -------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~ 521 (631)
|+|.+++.. .....+++.....++.+++.| +.+||+|||+++....
T Consensus 262 VmEy~~gg~L~~~l~~---~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIvHrDLKPeNILld~~g~vKL~DFGla~~~~~ 338 (576)
T 2acx_A 262 VLTLMNGGDLKFHIYH---MGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPE 338 (576)
T ss_dssp EECCCCSCBHHHHHHS---SSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCTTCEECCT
T ss_pred EEEcCCCCcHHHHHHh---cCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeccCCchheEEEeCCCCeEEEecccceeccc
Confidence 677776643 223458888888888887765 5689999999987743
Q ss_pred CCccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCh--HHHHH-HHHHhHh-hhcCChh
Q 042825 522 NGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDP--EYIIH-LATWFQK-MHKNHDT 597 (631)
Q Consensus 522 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~--~~~~~-l~~~~~~-~~~~~~~ 597 (631)
.. .....+||+.|+|||++.+..|+.++|||||||++|||++|+.||....... ..... +...... ....+.+
T Consensus 339 ~~---~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~~i~~~i~~~~~~~p~~~s~~ 415 (576)
T 2acx_A 339 GQ---TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEEYSERFSPQ 415 (576)
T ss_dssp TC---CEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHHHHHHHHHHCCCCCCTTSCHH
T ss_pred Cc---cccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchhHHHHHHHhhcccccCCccCCHH
Confidence 22 2345689999999999998899999999999999999999999998654321 11111 1111101 1123578
Q ss_pred HHHHHHhhcCCChhhHH-----hHHHHHH
Q 042825 598 FQMAIDKTIQLDEENLA-----NVSTVAE 621 (631)
Q Consensus 598 l~~~id~~L~~d~~~r~-----~~~~vl~ 621 (631)
+.++|.++|..||.+|+ ++.++++
T Consensus 416 ~~dLI~~lL~~dP~~R~g~~~~sa~eil~ 444 (576)
T 2acx_A 416 ARSLCSQLLCKDPAERLGCRGGSAREVKE 444 (576)
T ss_dssp HHHHHHHHTCSSGGGSTTCSSSHHHHHHT
T ss_pred HHHHHHHhccCCHHHcCCCCCCCHHHHHh
Confidence 99999999999999998 7777764
|
| >3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ... | Back alignment and structure |
|---|
Probab=99.87 E-value=1.5e-22 Score=205.24 Aligned_cols=197 Identities=21% Similarity=0.306 Sum_probs=142.2
Q ss_pred hcCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCH-HHHHHHHHHHHHHhc---------------------
Q 042825 416 ATNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTE-QGIAQFESEITVLTK--------------------- 472 (631)
Q Consensus 416 ~t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~-~~~~~~~~Ei~~l~~--------------------- 472 (631)
+.++|...+.||+|+||+||+|+.. +++.||||++....... .....+.+|++++.+
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 86 (279)
T 3fdn_A 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYL 86 (279)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred ecccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEE
Confidence 4568999999999999999999876 47899999986532111 124568889999876
Q ss_pred -------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCC
Q 042825 473 -------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPE 521 (631)
Q Consensus 473 -------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~ 521 (631)
|++.+++.. ...+++.....++.+++.+ +.+||+|||++.....
T Consensus 87 v~e~~~~~~l~~~l~~-----~~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~ 161 (279)
T 3fdn_A 87 ILEYAPLGTVYRELQK-----LSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPS 161 (279)
T ss_dssp EECCCTTEEHHHHHHH-----HSSCCHHHHHHHHHHHHHHHHHHHTTTCEECCCCGGGEEECTTSCEEECSCCEESCC--
T ss_pred EEecCCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHhCCEecccCChHhEEEcCCCCEEEEeccccccCCc
Confidence 344444432 1357888888888887765 5678999999876532
Q ss_pred CCccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHh-HhhhcCChhHHH
Q 042825 522 NGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWF-QKMHKNHDTFQM 600 (631)
Q Consensus 522 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~-~~~~~~~~~l~~ 600 (631)
. ......||+.|+|||.+.+..++.++||||+|+++|||++|+.||....... ....+.... ......++++.+
T Consensus 162 ~----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 236 (279)
T 3fdn_A 162 S----RRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE-TYKRISRVEFTFPDFVTEGARD 236 (279)
T ss_dssp ----------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHH-HHHHHHHTCCCCCTTSCHHHHH
T ss_pred c----cccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHHH-HHHHHHhCCCCCCCcCCHHHHH
Confidence 1 2344679999999999998899999999999999999999999998543221 111111110 001113467899
Q ss_pred HHHhhcCCChhhHHhHHHHHHH
Q 042825 601 AIDKTIQLDEENLANVSTVAEL 622 (631)
Q Consensus 601 ~id~~L~~d~~~r~~~~~vl~l 622 (631)
++.+||..||.+|+++.++++-
T Consensus 237 li~~~l~~~p~~Rps~~e~l~h 258 (279)
T 3fdn_A 237 LISRLLKHNPSQRPMLREVLEH 258 (279)
T ss_dssp HHHHHCCSSGGGSCCHHHHHHC
T ss_pred HHHHHhccChhhCCCHHHHhhC
Confidence 9999999999999999998864
|
| >1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... | Back alignment and structure |
|---|
Probab=99.87 E-value=1.9e-22 Score=204.34 Aligned_cols=201 Identities=25% Similarity=0.357 Sum_probs=149.2
Q ss_pred hcCCcccceeecCCCceEEEEEEecCCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc-----------------------
Q 042825 416 ATNNFSEENRLGRGGVGTVYKGELKDGTEVGVKRMELGSVTEQGIAQFESEITVLTK----------------------- 472 (631)
Q Consensus 416 ~t~~f~~~~~iG~G~fg~Vyk~~~~~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~----------------------- 472 (631)
..++|...+.||+|+||.||+|+..++..||||++..... ..+.+.+|++++.+
T Consensus 11 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~v~e 87 (279)
T 1qpc_A 11 PRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSM---SPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIITE 87 (279)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTSS---CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCEEEEE
T ss_pred CHHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCcc---cHHHHHHHHHHHHhCCCcCcceEEEEEcCCCcEEEEe
Confidence 3467889999999999999999988888999999976543 34678899998876
Q ss_pred ----CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCCc
Q 042825 473 ----GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENGK 524 (631)
Q Consensus 473 ----gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~~ 524 (631)
++|.+++... ....+++.....++.+++.| +.+||+|||+++......
T Consensus 88 ~~~~~~L~~~l~~~---~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~- 163 (279)
T 1qpc_A 88 YMENGSLVDFLKTP---SGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE- 163 (279)
T ss_dssp CCTTCBHHHHTTSH---HHHTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECSSSC-
T ss_pred cCCCCCHHHHHhcC---CCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHhhEEEcCCCCEEECCCcccccccCcc-
Confidence 5566555321 11258888888888888776 467899999998774322
Q ss_pred cccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChHHHHHHHHHhHh--hhcCChhHHHH
Q 042825 525 HSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT-GRKVVDATHSDPEYIIHLATWFQK--MHKNHDTFQMA 601 (631)
Q Consensus 525 ~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~Ellt-G~~P~~~~~~~~~~~~~l~~~~~~--~~~~~~~l~~~ 601 (631)
........++..|+|||.+.+..++.++|||||||++|||++ |+.||.+....+ ....+..-... ....++++.++
T Consensus 164 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~l 242 (279)
T 1qpc_A 164 YTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPE-VIQNLERGYRMVRPDNCPEELYQL 242 (279)
T ss_dssp EECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH-HHHHHHTTCCCCCCTTCCHHHHHH
T ss_pred cccccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHHH-HHHHHhcccCCCCcccccHHHHHH
Confidence 222334567889999999988889999999999999999999 999997643221 11111110000 11224689999
Q ss_pred HHhhcCCChhhHHhHHHHHHHHH
Q 042825 602 IDKTIQLDEENLANVSTVAELGD 624 (631)
Q Consensus 602 id~~L~~d~~~r~~~~~vl~lal 624 (631)
+..|+..+|.+|+++.++++..-
T Consensus 243 i~~~l~~~p~~Rps~~~l~~~l~ 265 (279)
T 1qpc_A 243 MRLCWKERPEDRPTFDYLRSVLE 265 (279)
T ss_dssp HHHHTCSSGGGSCCHHHHHHHHH
T ss_pred HHHHhccChhhCCCHHHHHHHHH
Confidence 99999999999999999887543
|
| >4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A | Back alignment and structure |
|---|
Probab=99.87 E-value=6e-22 Score=209.67 Aligned_cols=201 Identities=18% Similarity=0.261 Sum_probs=143.3
Q ss_pred hcCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhcCChhH-----------------
Q 042825 416 ATNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTKGTLGR----------------- 477 (631)
Q Consensus 416 ~t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~gsL~~----------------- 477 (631)
..++|...+.||+|+||+||+|+.. +|+.||||++..........+++.+|+.++.+-....
T Consensus 40 l~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 119 (371)
T 4exu_A 40 LPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNF 119 (371)
T ss_dssp EETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTC
T ss_pred ccccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccc
Confidence 4568999999999999999999965 5899999999876556666788999999987611000
Q ss_pred ---Hh-Hhhh-----hcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCCc
Q 042825 478 ---HL-FNWE-----EEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENGK 524 (631)
Q Consensus 478 ---~L-~~~~-----~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~~ 524 (631)
++ .++. ......+++.....++.+++.| +.+||+|||+++....
T Consensus 120 ~~~~lv~e~~~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~--- 196 (371)
T 4exu_A 120 YDFYLVMPFMQTDLQKIMGMEFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHADA--- 196 (371)
T ss_dssp CCCEEEEECCCEEHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECSTTCC--------
T ss_pred eeEEEEEccccccHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCcCHHHeEECCCCCEEEEecCccccccc---
Confidence 00 0000 0012348888888888888776 4689999999986532
Q ss_pred cccccccccCccccccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHH-----------------
Q 042825 525 HSILTKVAGTFGYLAPEYIVT-GRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLAT----------------- 586 (631)
Q Consensus 525 ~~~~~~~~gt~~Y~aPE~~~~-~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~----------------- 586 (631)
......||+.|+|||++.+ ..++.++|||||||++|||++|+.||.+....+ ....+..
T Consensus 197 --~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~ 273 (371)
T 4exu_A 197 --EMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLD-QLTQILKVTGVPGTEFVQKLNDKA 273 (371)
T ss_dssp -----CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCCCCHHHHTTCSCHH
T ss_pred --CcCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHHhCCCcHHHHHHhhhhh
Confidence 2345678999999999887 679999999999999999999999998653221 1111111
Q ss_pred ---HhH------------hhhcCChhHHHHHHhhcCCChhhHHhHHHHHHH
Q 042825 587 ---WFQ------------KMHKNHDTFQMAIDKTIQLDEENLANVSTVAEL 622 (631)
Q Consensus 587 ---~~~------------~~~~~~~~l~~~id~~L~~d~~~r~~~~~vl~l 622 (631)
+.. .....++++.+++.+||..||.+|+++.++++-
T Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 324 (371)
T 4exu_A 274 AKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH 324 (371)
T ss_dssp HHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred hhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcC
Confidence 000 011235688999999999999999999988763
|
| >3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A | Back alignment and structure |
|---|
Probab=99.87 E-value=3.9e-22 Score=203.08 Aligned_cols=197 Identities=17% Similarity=0.248 Sum_probs=130.7
Q ss_pred cCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHH-Hhc----------------------
Q 042825 417 TNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITV-LTK---------------------- 472 (631)
Q Consensus 417 t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~-l~~---------------------- 472 (631)
.++|+..+.||+|+||+||+|+.. +|+.||||++....... ...++..|... +..
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv 84 (290)
T 3fme_A 6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQ-EQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWIC 84 (290)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHH-HHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEE
T ss_pred HHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcH-HHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEE
Confidence 467999999999999999999974 68999999997654333 33334444433 332
Q ss_pred -----CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC-------------------------CCcEEEeeccccccCCC
Q 042825 473 -----GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG-------------------------DDMRVADFGLVRLVPEN 522 (631)
Q Consensus 473 -----gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g-------------------------~~~kl~DFGla~~~~~~ 522 (631)
|++.+++.... .....+++.....|+.+++.| +.+||+|||+++.....
T Consensus 85 ~e~~~~~l~~~l~~~~-~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 163 (290)
T 3fme_A 85 MELMDTSLDKFYKQVI-DKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDD 163 (290)
T ss_dssp EECCSEEHHHHHHHHH-HTTCCCCHHHHHHHHHHHHHHHHHHHHHSCCCCCCCSGGGCEECTTCCEEBCCC---------
T ss_pred EehhccchHHHHHHHH-hcCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEeecCCccccccc
Confidence 45555554322 234568888888888777654 46789999999876422
Q ss_pred CccccccccccCccccccccc----ccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHhHhh------h
Q 042825 523 GKHSILTKVAGTFGYLAPEYI----VTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQKM------H 592 (631)
Q Consensus 523 ~~~~~~~~~~gt~~Y~aPE~~----~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~~~~------~ 592 (631)
. ......||+.|+|||++ .+..++.++||||+||++|||+||+.||+...... ..+....... .
T Consensus 164 ~---~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~---~~~~~~~~~~~~~~~~~ 237 (290)
T 3fme_A 164 V---AKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPF---QQLKQVVEEPSPQLPAD 237 (290)
T ss_dssp ---------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHH---HHHHHHHHSCCCCCCTT
T ss_pred c---cccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchH---HHHHHHhccCCCCcccc
Confidence 1 22335799999999996 45678999999999999999999999998643322 2222222111 1
Q ss_pred cCChhHHHHHHhhcCCChhhHHhHHHHHH
Q 042825 593 KNHDTFQMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 593 ~~~~~l~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
..++++.+++.+|+..||.+|+++.++++
T Consensus 238 ~~~~~~~~li~~~l~~~p~~Rpt~~e~l~ 266 (290)
T 3fme_A 238 KFSAEFVDFTSQCLKKNSKERPTYPELMQ 266 (290)
T ss_dssp TSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred cCCHHHHHHHHHHhhcChhhCcCHHHHHh
Confidence 12467999999999999999999999875
|
| >3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.87 E-value=8.4e-23 Score=212.10 Aligned_cols=196 Identities=19% Similarity=0.308 Sum_probs=136.0
Q ss_pred CCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc------------------------
Q 042825 418 NNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK------------------------ 472 (631)
Q Consensus 418 ~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~------------------------ 472 (631)
++|...+.||+|+||+||+|+.. +++.||||++..... ......+.+|++++.+
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHE-EGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFE 80 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC-------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEE
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccc-cccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEec
Confidence 57899999999999999999976 689999999975431 1122245678888876
Q ss_pred ---CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCCcc
Q 042825 473 ---GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENGKH 525 (631)
Q Consensus 473 ---gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~~~ 525 (631)
|++.+++. .....+++.....++.+++.| +.+||+|||+++..... .
T Consensus 81 ~~~~~l~~~~~----~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~--~ 154 (324)
T 3mtl_A 81 YLDKDLKQYLD----DCGNIINMHNVKLFLFQLLRGLAYCHRQKVLHRDLKPQNLLINERGELKLADFGLARAKSIP--T 154 (324)
T ss_dssp CCSEEHHHHHH----HTTTCCCHHHHHHHHHHHHHHHHHHHHTTEEESSCCGGGEEECTTCCEEECSSSEEECC------
T ss_pred ccccCHHHHHH----hcCCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCcCHHHEEECCCCCEEEccCcccccccCC--c
Confidence 44444443 223468888888888887765 56899999999865322 2
Q ss_pred ccccccccCccccccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHhH---------------
Q 042825 526 SILTKVAGTFGYLAPEYIVT-GRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQ--------------- 589 (631)
Q Consensus 526 ~~~~~~~gt~~Y~aPE~~~~-~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~~--------------- 589 (631)
.......||+.|+|||++.+ ..++.++||||+||++|||++|+.||.+....+ ....+.....
T Consensus 155 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~ 233 (324)
T 3mtl_A 155 KTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEE-QLHFIFRILGTPTEETWPGILSNEE 233 (324)
T ss_dssp --------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCCCCTTTSTTGGGCHH
T ss_pred cccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHhCCCChHhchhhhcchh
Confidence 22345678999999999876 568999999999999999999999998654321 1111111100
Q ss_pred ----------------hhhcCChhHHHHHHhhcCCChhhHHhHHHHHH
Q 042825 590 ----------------KMHKNHDTFQMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 590 ----------------~~~~~~~~l~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
.....++++.+++.+||..||.+|+++.++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 281 (324)
T 3mtl_A 234 FKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMK 281 (324)
T ss_dssp HHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred hcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhc
Confidence 00112467899999999999999999998875
|
| >4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=3.1e-22 Score=208.33 Aligned_cols=197 Identities=18% Similarity=0.280 Sum_probs=141.3
Q ss_pred cCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc-----------------------
Q 042825 417 TNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK----------------------- 472 (631)
Q Consensus 417 t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~----------------------- 472 (631)
.++|...+.||+|+||.||+|+.. +|+.||||++..........+.+.+|++++.+
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 103 (331)
T 4aaa_A 24 MEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVF 103 (331)
T ss_dssp GGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEE
Confidence 457899999999999999999976 48999999998766555566778899998876
Q ss_pred -----CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCC
Q 042825 473 -----GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENG 523 (631)
Q Consensus 473 -----gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~ 523 (631)
+++..++ .....+++.....++.+++.| +.+||+|||+++......
T Consensus 104 e~~~~~~l~~~~-----~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 178 (331)
T 4aaa_A 104 EFVDHTILDDLE-----LFPNGLDYQVVQKYLFQIINGIGFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPG 178 (331)
T ss_dssp ECCSEEHHHHHH-----HSTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCTTC-------
T ss_pred ecCCcchHHHHH-----hhccCCCHHHHHHHHHHHHHHHHHHHHCCEEccCcChheEEEcCCCcEEEEeCCCceeecCCc
Confidence 1111111 123468888888888888765 567899999998764221
Q ss_pred ccccccccccCcccccccccccC-CCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHh--------------
Q 042825 524 KHSILTKVAGTFGYLAPEYIVTG-RITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWF-------------- 588 (631)
Q Consensus 524 ~~~~~~~~~gt~~Y~aPE~~~~~-~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~-------------- 588 (631)
.......||..|+|||++.+. .++.++||||+||++|||++|+.||....... ....+....
T Consensus 179 --~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 255 (331)
T 4aaa_A 179 --EVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDID-QLYHIMMCLGNLIPRHQELFNKN 255 (331)
T ss_dssp -------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCSCCHHHHHHHHHC
T ss_pred --cccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHH-HHHHHHHHhCCCChhhhhHhhhc
Confidence 223456799999999998775 68999999999999999999999998653321 111111100
Q ss_pred ------------------HhhhcCChhHHHHHHhhcCCChhhHHhHHHHHH
Q 042825 589 ------------------QKMHKNHDTFQMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 589 ------------------~~~~~~~~~l~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
......++.+.+++.+||..||.+|+++.++++
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~ 306 (331)
T 4aaa_A 256 PVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLH 306 (331)
T ss_dssp GGGTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred cccccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 000123567899999999999999999988765
|
| >3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A | Back alignment and structure |
|---|
Probab=99.87 E-value=3.5e-22 Score=210.66 Aligned_cols=196 Identities=18% Similarity=0.239 Sum_probs=136.6
Q ss_pred hcCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc----------------------
Q 042825 416 ATNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK---------------------- 472 (631)
Q Consensus 416 ~t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~---------------------- 472 (631)
..++|...+.||+|+||+||+++.. +++.||||++...... .+.+.+|+.++.+
T Consensus 18 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~---~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 94 (361)
T 3uc3_A 18 DSDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAI---DENVQREIINHRSLRHPNIVRFKEVILTPTHLAII 94 (361)
T ss_dssp CTTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTTS---CHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred CCCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCccc---cHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEE
Confidence 3568999999999999999999976 6899999999765432 2567788888765
Q ss_pred ------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC--------------------------CCcEEEeeccccccC
Q 042825 473 ------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG--------------------------DDMRVADFGLVRLVP 520 (631)
Q Consensus 473 ------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g--------------------------~~~kl~DFGla~~~~ 520 (631)
|+|.+++.. ...+++.....++.+++.| ..+||+|||+++...
T Consensus 95 ~e~~~~~~L~~~l~~-----~~~~~~~~~~~i~~ql~~~L~~LH~~~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~ 169 (361)
T 3uc3_A 95 MEYASGGELYERICN-----AGRFSEDEARFFFQQLLSGVSYCHSMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSV 169 (361)
T ss_dssp EECCCSCBHHHHHHH-----HSSCCHHHHHHHHHHHHHHHHHHHHTTCCSCCCCGGGEEECSSSSCCEEECCCCCC----
T ss_pred EEeCCCCCHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCceEEEeecCcccccc
Confidence 566666642 1357888888888887765 238999999998542
Q ss_pred CCCccccccccccCcccccccccccCCCCch-hhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHhHh------hhc
Q 042825 521 ENGKHSILTKVAGTFGYLAPEYIVTGRITAK-VDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQK------MHK 593 (631)
Q Consensus 521 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k-~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~~~------~~~ 593 (631)
.. .......||+.|+|||++.+..++.+ +||||+||++|||++|+.||............+...... ...
T Consensus 170 ~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (361)
T 3uc3_A 170 LH---SQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYSIPDDIR 246 (361)
T ss_dssp --------------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCCHHHHHHHHHTTCCCCCTTSC
T ss_pred cc---CCCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhcCCCCCCCcCC
Confidence 11 12344679999999999988888765 899999999999999999998644322122222221111 112
Q ss_pred CChhHHHHHHhhcCCChhhHHhHHHHHHH
Q 042825 594 NHDTFQMAIDKTIQLDEENLANVSTVAEL 622 (631)
Q Consensus 594 ~~~~l~~~id~~L~~d~~~r~~~~~vl~l 622 (631)
.+.++.+++.++|..||.+|+++.++++-
T Consensus 247 ~s~~~~~li~~~L~~dP~~Rps~~ell~h 275 (361)
T 3uc3_A 247 ISPECCHLISRIFVADPATRISIPEIKTH 275 (361)
T ss_dssp CCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred CCHHHHHHHHHHccCChhHCcCHHHHHhC
Confidence 35789999999999999999999998764
|
| >2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A | Back alignment and structure |
|---|
Probab=99.87 E-value=2.9e-22 Score=207.66 Aligned_cols=196 Identities=18% Similarity=0.271 Sum_probs=148.0
Q ss_pred cCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCH----HHHHHHHHHHHHHhc-------------------
Q 042825 417 TNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTE----QGIAQFESEITVLTK------------------- 472 (631)
Q Consensus 417 t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~----~~~~~~~~Ei~~l~~------------------- 472 (631)
.+.|...+.||+|+||.||+|+.. +|+.||||++....... ...+++.+|++++.+
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 90 (321)
T 2a2a_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDV 90 (321)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred hccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEE
Confidence 456889999999999999999976 58999999997653321 135678999998876
Q ss_pred ---------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------C----CcEEEeecc
Q 042825 473 ---------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------D----DMRVADFGL 515 (631)
Q Consensus 473 ---------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~----~~kl~DFGl 515 (631)
++|.+++.. ...+++.....++.+++.| + .+||+|||+
T Consensus 91 ~lv~e~~~~~~L~~~l~~-----~~~~~~~~~~~i~~qi~~aL~~lH~~~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~ 165 (321)
T 2a2a_A 91 VLILELVSGGELFDFLAQ-----KESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGL 165 (321)
T ss_dssp EEEECCCCSCBHHHHHHT-----CSCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTTSSSCCEEECCCTT
T ss_pred EEEEEcCCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChHHEEEecCCCCcCCEEEccCcc
Confidence 566666632 2457888888888887765 2 589999999
Q ss_pred ccccCCCCccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHH----hHh-
Q 042825 516 VRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATW----FQK- 590 (631)
Q Consensus 516 a~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~----~~~- 590 (631)
++...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||.+....+ ....+... ...
T Consensus 166 ~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-~~~~i~~~~~~~~~~~ 241 (321)
T 2a2a_A 166 AHEIEDGV---EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE-TLANITSVSYDFDEEF 241 (321)
T ss_dssp CEECCTTC---CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHH-HHHHHHTTCCCCCHHH
T ss_pred ceecCccc---cccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHHH-HHHHHHhcccccChhh
Confidence 98764221 2345679999999999998899999999999999999999999998643221 11111110 001
Q ss_pred hhcCChhHHHHHHhhcCCChhhHHhHHHHHH
Q 042825 591 MHKNHDTFQMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 591 ~~~~~~~l~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
....++.+.+++.+||..||.+|+++.++++
T Consensus 242 ~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~ 272 (321)
T 2a2a_A 242 FSHTSELAKDFIRKLLVKETRKRLTIQEALR 272 (321)
T ss_dssp HTTCCHHHHHHHHTTSCSSTTTSCCHHHHHH
T ss_pred hcccCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 1123567899999999999999999999876
|
| >3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.87 E-value=8.3e-23 Score=206.93 Aligned_cols=200 Identities=20% Similarity=0.323 Sum_probs=125.9
Q ss_pred hcCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCH-HHHHHHHHHHHHHhc---------------------
Q 042825 416 ATNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTE-QGIAQFESEITVLTK--------------------- 472 (631)
Q Consensus 416 ~t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~-~~~~~~~~Ei~~l~~--------------------- 472 (631)
..++|...+.||+|+||.||+|+.. +|+.||||++....... ...+++.+|++++.+
T Consensus 9 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 88 (278)
T 3cok_A 9 KIEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYL 88 (278)
T ss_dssp SGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEE
T ss_pred ccccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEE
Confidence 3467999999999999999999974 69999999996532111 124678899998875
Q ss_pred -------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCC
Q 042825 473 -------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPE 521 (631)
Q Consensus 473 -------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~ 521 (631)
++|.+++. .....+++.....++.+++.| +.+||+|||+++....
T Consensus 89 v~e~~~~~~L~~~l~----~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~ 164 (278)
T 3cok_A 89 VLEMCHNGEMNRYLK----NRVKPFSENEARHFMHQIITGMLYLHSHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKM 164 (278)
T ss_dssp EEECCTTEEHHHHHH----TCSSCCCHHHHHHHHHHHHHHHHHHHHTTEECSSCCGGGEEECTTCCEEECCCTTCEECC-
T ss_pred EEecCCCCcHHHHHh----hccCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEEEeecceeeccC
Confidence 34544443 233568899999999888776 5678999999987642
Q ss_pred CCccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHhHhhhcCChhHHHH
Q 042825 522 NGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQKMHKNHDTFQMA 601 (631)
Q Consensus 522 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~ 601 (631)
.. .......||+.|+|||.+.+..++.++|||||||++|||++|+.||...............-.......+.++.++
T Consensus 165 ~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 242 (278)
T 3cok_A 165 PH--EKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLADYEMPSFLSIEAKDL 242 (278)
T ss_dssp -----------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC-----CCSSCCCCCTTSCHHHHHH
T ss_pred CC--CcceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHHHHHHhhcccCCccccCHHHHHH
Confidence 21 1223467999999999998888999999999999999999999999865433211100000000011124678999
Q ss_pred HHhhcCCChhhHHhHHHHHH
Q 042825 602 IDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 602 id~~L~~d~~~r~~~~~vl~ 621 (631)
+.+||..||.+|+++.++++
T Consensus 243 i~~~l~~dp~~Rps~~~~l~ 262 (278)
T 3cok_A 243 IHQLLRRNPADRLSLSSVLD 262 (278)
T ss_dssp HHHHSCSSGGGSCCHHHHTT
T ss_pred HHHHcccCHhhCCCHHHHhc
Confidence 99999999999999998875
|
| >3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=99.87 E-value=2.7e-22 Score=204.29 Aligned_cols=197 Identities=23% Similarity=0.303 Sum_probs=143.5
Q ss_pred cCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc-----------------------
Q 042825 417 TNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK----------------------- 472 (631)
Q Consensus 417 t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~----------------------- 472 (631)
.++|...+.||+|+||+||+++.. ++..||+|++..... ....+++.+|++++.+
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 99 (285)
T 3is5_A 21 DDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRS-QVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVM 99 (285)
T ss_dssp HHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGC-CSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhheeecceeccCCCeEEEEEEEccCCceEEEEEeecccc-chhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEE
Confidence 356888999999999999999975 589999999976532 2245778999999876
Q ss_pred -----CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC---------------------------CCcEEEeeccccccC
Q 042825 473 -----GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG---------------------------DDMRVADFGLVRLVP 520 (631)
Q Consensus 473 -----gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g---------------------------~~~kl~DFGla~~~~ 520 (631)
|+|.+++...... ...+++.....|+.+++.| ..+||+|||+++...
T Consensus 100 e~~~~~~L~~~l~~~~~~-~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~ 178 (285)
T 3is5_A 100 ETCEGGELLERIVSAQAR-GKALSEGYVAELMKQMMNALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFK 178 (285)
T ss_dssp CCCSCCBHHHHHHHHHHH-TCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC--
T ss_pred EeCCCCcHHHHHHhhhhc-ccCCCHHHHHHHHHHHHHHHHHHHhCCEEECCCCHHHEEEecCCCCCCEEEEeeecceecC
Confidence 5777766543222 3568888888888888765 347899999998764
Q ss_pred CCCccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHhHh-----hhcCC
Q 042825 521 ENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQK-----MHKNH 595 (631)
Q Consensus 521 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~~~-----~~~~~ 595 (631)
.. .......||+.|+|||++. ..++.++||||+||++|||++|+.||.+.... .......+... ....+
T Consensus 179 ~~---~~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 252 (285)
T 3is5_A 179 SD---EHSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLE--EVQQKATYKEPNYAVECRPLT 252 (285)
T ss_dssp -----------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHCCCCCCC--CCCC
T ss_pred Cc---ccCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCHH--HHHhhhccCCcccccccCcCC
Confidence 22 1234567999999999875 57899999999999999999999999865322 11111111111 11235
Q ss_pred hhHHHHHHhhcCCChhhHHhHHHHHH
Q 042825 596 DTFQMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 596 ~~l~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
+++.+++.++|..||.+|+++.++++
T Consensus 253 ~~~~~li~~~L~~dP~~Rps~~e~l~ 278 (285)
T 3is5_A 253 PQAVDLLKQMLTKDPERRPSAAQVLH 278 (285)
T ss_dssp HHHHHHHHHHTCSCTTTSCCHHHHHT
T ss_pred HHHHHHHHHHccCChhhCcCHHHHhc
Confidence 68899999999999999999998875
|
| >2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.87 E-value=2.3e-22 Score=210.62 Aligned_cols=203 Identities=14% Similarity=0.120 Sum_probs=139.2
Q ss_pred cCCcccceeecCCCceEEEEEEec----CCcEEEEEEEecCCCCHHH---------HHHHHHHHHHHhc-----------
Q 042825 417 TNNFSEENRLGRGGVGTVYKGELK----DGTEVGVKRMELGSVTEQG---------IAQFESEITVLTK----------- 472 (631)
Q Consensus 417 t~~f~~~~~iG~G~fg~Vyk~~~~----~g~~vAvK~l~~~~~~~~~---------~~~~~~Ei~~l~~----------- 472 (631)
.++|...+.||+|+||.||+|+.. ++..||||++......... ...+.+|+..+..
T Consensus 36 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~ 115 (345)
T 2v62_A 36 GNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYG 115 (345)
T ss_dssp SCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEE
T ss_pred CceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeec
Confidence 357899999999999999999975 5778999999765321111 1234555555543
Q ss_pred --------------------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------C--
Q 042825 473 --------------------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------D-- 506 (631)
Q Consensus 473 --------------------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~-- 506 (631)
++|.+++.. ...+++.....|+.+++.| +
T Consensus 116 ~~~~~~~~~~~~~lv~e~~~~~L~~~l~~-----~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~ 190 (345)
T 2v62_A 116 SGLTEFKGRSYRFMVMERLGIDLQKISGQ-----NGTFKKSTVLQLGIRMLDVLEYIHENEYVHGDIKAANLLLGYKNPD 190 (345)
T ss_dssp EEEEESSSCEEEEEEEECEEEEHHHHCBG-----GGBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEESSSTT
T ss_pred ccccccCCCcEEEEEEeccCCCHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCcCHHHEEEccCCCC
Confidence 334444321 1268999999999998876 3
Q ss_pred CcEEEeeccccccCCCCc-----cccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHH
Q 042825 507 DMRVADFGLVRLVPENGK-----HSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYI 581 (631)
Q Consensus 507 ~~kl~DFGla~~~~~~~~-----~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~ 581 (631)
.+||+|||+++.+..... ........||+.|+|||++.+..++.++|||||||++|||+||+.||..........
T Consensus 191 ~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~ 270 (345)
T 2v62_A 191 QVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPVAV 270 (345)
T ss_dssp SEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHHHH
T ss_pred cEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccccHHH
Confidence 789999999987642211 112245689999999999999899999999999999999999999997544443222
Q ss_pred HHHHHHh--------Hhhh---cCChhHHHHHHhhcCCChhhHHhHHHHHHHHH
Q 042825 582 IHLATWF--------QKMH---KNHDTFQMAIDKTIQLDEENLANVSTVAELGD 624 (631)
Q Consensus 582 ~~l~~~~--------~~~~---~~~~~l~~~id~~L~~d~~~r~~~~~vl~lal 624 (631)
....... .... ..++++.+++..|+..||.+||++.++++...
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~ 324 (345)
T 2v62_A 271 QTAKTNLLDELPQSVLKWAPSGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILN 324 (345)
T ss_dssp HHHHHHHHHTTTHHHHHHSCTTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHC
T ss_pred HHHHHhhcccccHHHHhhccccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHh
Confidence 2221111 1111 34568999999999999999999999887543
|
| >1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... | Back alignment and structure |
|---|
Probab=99.87 E-value=4e-22 Score=214.57 Aligned_cols=193 Identities=16% Similarity=0.236 Sum_probs=138.5
Q ss_pred CCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc------------------------
Q 042825 418 NNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK------------------------ 472 (631)
Q Consensus 418 ~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~------------------------ 472 (631)
..|...+.||+|+||.||+|+.. +|+.||||++..... .+.+|++++.+
T Consensus 54 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~------~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~ 127 (420)
T 1j1b_A 54 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR------FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVY 127 (420)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCTT------SCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEE
T ss_pred ceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccch------hHHHHHHHHHHcCCCCccceeeEEeccCCCCccee
Confidence 46888999999999999999986 599999999975421 23467777765
Q ss_pred ---------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC-------------------------CCcEEEeeccccc
Q 042825 473 ---------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG-------------------------DDMRVADFGLVRL 518 (631)
Q Consensus 473 ---------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g-------------------------~~~kl~DFGla~~ 518 (631)
+++.+.+..+ ......+++.....++.++++| ..+||+|||+++.
T Consensus 128 ~~lv~e~~~~~l~~~~~~~-~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NILl~~~~~~~kl~DFG~a~~ 206 (420)
T 1j1b_A 128 LNLVLDYVPETVYRVARHY-SRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ 206 (420)
T ss_dssp EEEEEECCCEEHHHHHHHH-HHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEEETTTTEEEECCCTTCEE
T ss_pred EEeehhcccccHHHHHHHH-hhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChhhEEEeCCCCeEEeccchhhhh
Confidence 1122222211 1234568888888888888766 2368999999997
Q ss_pred cCCCCccccccccccCcccccccccccC-CCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHH----------
Q 042825 519 VPENGKHSILTKVAGTFGYLAPEYIVTG-RITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATW---------- 587 (631)
Q Consensus 519 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~---------- 587 (631)
+.... ......||+.|+|||++.+. .++.++|||||||++|||++|+.||.+....+ ....+...
T Consensus 207 ~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~-~l~~i~~~lg~p~~~~~~ 282 (420)
T 1j1b_A 207 LVRGE---PNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVD-QLVEIIKVLGTPTREQIR 282 (420)
T ss_dssp CCTTC---CCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHHHCSCCHHHHH
T ss_pred cccCC---CceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHhCCCCHHHHH
Confidence 64222 23456799999999998765 79999999999999999999999998653221 11111110
Q ss_pred -------------------hHhh-hcCChhHHHHHHhhcCCChhhHHhHHHHHH
Q 042825 588 -------------------FQKM-HKNHDTFQMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 588 -------------------~~~~-~~~~~~l~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
.... ...+.++.+++.++|..||.+|+++.++++
T Consensus 283 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~ 336 (420)
T 1j1b_A 283 EMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA 336 (420)
T ss_dssp HHCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred hhChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhC
Confidence 0000 012467899999999999999999998875
|
| >3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... | Back alignment and structure |
|---|
Probab=99.87 E-value=1.6e-22 Score=205.78 Aligned_cols=202 Identities=20% Similarity=0.309 Sum_probs=151.7
Q ss_pred hhcCCcccceeecCCCceEEEEEEecC-CcEEEEEEEecCCCCHHHHHHHHHHHHHHhc---------------------
Q 042825 415 NATNNFSEENRLGRGGVGTVYKGELKD-GTEVGVKRMELGSVTEQGIAQFESEITVLTK--------------------- 472 (631)
Q Consensus 415 ~~t~~f~~~~~iG~G~fg~Vyk~~~~~-g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~--------------------- 472 (631)
...++|...+.||+|+||.||+|+... +..||||++.... ...+++.+|++++.+
T Consensus 10 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 86 (288)
T 3kfa_A 10 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT---MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 86 (288)
T ss_dssp CCGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCS---THHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEE
T ss_pred ccccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCH---HHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEE
Confidence 356688999999999999999999774 8899999997543 345778999998876
Q ss_pred -------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCC
Q 042825 473 -------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPE 521 (631)
Q Consensus 473 -------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~ 521 (631)
++|.+++.. .....+++..+..++.+++.+ +.+||+|||+++....
T Consensus 87 v~e~~~~~~L~~~~~~---~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~ 163 (288)
T 3kfa_A 87 ITEFMTYGNLLDYLRE---CNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG 163 (288)
T ss_dssp EEECCTTEEHHHHHHH---CCTTTSCHHHHHHHHHHHHHHHHHHHHHTCCCSCCSGGGEEECGGGCEEECCCCGGGTSCS
T ss_pred EEEcCCCCcHHHHHHh---cccCCccHhHHHHHHHHHHHHHHHHHHCCccCCCCCcceEEEcCCCCEEEccCccceeccC
Confidence 455555532 234568888888888887765 4578999999987642
Q ss_pred CCccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChHHHHHHHHHhH--hhhcCChhH
Q 042825 522 NGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT-GRKVVDATHSDPEYIIHLATWFQ--KMHKNHDTF 598 (631)
Q Consensus 522 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~Ellt-G~~P~~~~~~~~~~~~~l~~~~~--~~~~~~~~l 598 (631)
. .........+|+.|+|||.+.+..++.++||||+|+++|||++ |+.||......... ..+..... .....++++
T Consensus 164 ~-~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l 241 (288)
T 3kfa_A 164 D-TYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY-ELLEKDYRMERPEGCPEKV 241 (288)
T ss_dssp S-SSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHH-HHHHTTCCCCCCTTCCHHH
T ss_pred C-ccccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHH-HHHhccCCCCCCCCCCHHH
Confidence 2 2223344567889999999998999999999999999999999 99999865433211 11111111 111224679
Q ss_pred HHHHHhhcCCChhhHHhHHHHHHHHH
Q 042825 599 QMAIDKTIQLDEENLANVSTVAELGD 624 (631)
Q Consensus 599 ~~~id~~L~~d~~~r~~~~~vl~lal 624 (631)
.+++..|+..||.+|+++.++++...
T Consensus 242 ~~li~~~l~~dp~~Rps~~~~~~~l~ 267 (288)
T 3kfa_A 242 YELMRACWQWNPSDRPSFAEIHQAFE 267 (288)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred HHHHHHHhCCChhhCcCHHHHHHHHH
Confidence 99999999999999999999887543
|
| >2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 | Back alignment and structure |
|---|
Probab=99.87 E-value=1.6e-22 Score=224.44 Aligned_cols=201 Identities=24% Similarity=0.346 Sum_probs=150.9
Q ss_pred hcCCcccceeecCCCceEEEEEEecCCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc-----------------------
Q 042825 416 ATNNFSEENRLGRGGVGTVYKGELKDGTEVGVKRMELGSVTEQGIAQFESEITVLTK----------------------- 472 (631)
Q Consensus 416 ~t~~f~~~~~iG~G~fg~Vyk~~~~~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~----------------------- 472 (631)
..++|...+.||+|+||.||+|++.++..||||+++..... .++|.+|+++|.+
T Consensus 265 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~---~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~lv~e 341 (535)
T 2h8h_A 265 PRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS---PEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTE 341 (535)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTSSC---HHHHHHHHHHHHHCCCTTBCCEEEEECSSSCEEEEC
T ss_pred chhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCCCC---HHHHHHHHHHHHhCCCCCEeeEEEEEeeccceEeee
Confidence 45678889999999999999999988889999999865432 4679999999876
Q ss_pred ----CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCCc
Q 042825 473 ----GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENGK 524 (631)
Q Consensus 473 ----gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~~ 524 (631)
|+|.+++... ....+++.....|+.+++.| +.+||+|||+++.... ..
T Consensus 342 ~~~~gsL~~~l~~~---~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~-~~ 417 (535)
T 2h8h_A 342 YMSKGSLLDFLKGE---TGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIED-NE 417 (535)
T ss_dssp CCTTEEHHHHHSHH---HHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCTTSTTTCCC-HH
T ss_pred hhcCCcHHHHHhhc---CCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEEcCCCcEEEcccccceecCC-Cc
Confidence 5666666431 12358888999999888876 4578999999987642 11
Q ss_pred cccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChHHHHHHHHHhHh--hhcCChhHHHH
Q 042825 525 HSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT-GRKVVDATHSDPEYIIHLATWFQK--MHKNHDTFQMA 601 (631)
Q Consensus 525 ~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~Ellt-G~~P~~~~~~~~~~~~~l~~~~~~--~~~~~~~l~~~ 601 (631)
........++..|+|||++....++.++|||||||+||||+| |+.||.+....+ ....+..-.+. ....++++.++
T Consensus 418 ~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~~-~~~~i~~~~~~~~~~~~~~~l~~l 496 (535)
T 2h8h_A 418 YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE-VLDQVERGYRMPCPPECPESLHDL 496 (535)
T ss_dssp HHTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHHH-HHHHHHTTCCCCCCTTCCHHHHHH
T ss_pred eecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH-HHHHHHcCCCCCCCCCCCHHHHHH
Confidence 122234567889999999998999999999999999999999 999998653221 11111111000 11224679999
Q ss_pred HHhhcCCChhhHHhHHHHHHHHH
Q 042825 602 IDKTIQLDEENLANVSTVAELGD 624 (631)
Q Consensus 602 id~~L~~d~~~r~~~~~vl~lal 624 (631)
+.+|+..||++|+++.++++...
T Consensus 497 i~~cl~~dP~~RPt~~~l~~~L~ 519 (535)
T 2h8h_A 497 MCQCWRKEPEERPTFEYLQAFLE 519 (535)
T ss_dssp HHHHTCSSGGGSCCHHHHHHHHH
T ss_pred HHHHcCCChhHCcCHHHHHHHHH
Confidence 99999999999999999887543
|
| >2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=2.6e-22 Score=205.11 Aligned_cols=198 Identities=17% Similarity=0.231 Sum_probs=147.9
Q ss_pred cCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCC-CHHHHHHHHHHHHHHhc----------------------
Q 042825 417 TNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSV-TEQGIAQFESEITVLTK---------------------- 472 (631)
Q Consensus 417 t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~-~~~~~~~~~~Ei~~l~~---------------------- 472 (631)
.++|...+.||+|+||.||+++.. +++.||+|++..... .....+.+.+|++++.+
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 93 (294)
T 2rku_A 14 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV 93 (294)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEE
Confidence 457889999999999999999976 488999999976532 34456788999998876
Q ss_pred ------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCC
Q 042825 473 ------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPEN 522 (631)
Q Consensus 473 ------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~ 522 (631)
++|.+++.. ...+++.....++.+++.| +.+||+|||+++.....
T Consensus 94 ~e~~~~~~L~~~~~~-----~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~ 168 (294)
T 2rku_A 94 LELCRRRSLLELHKR-----RKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYD 168 (294)
T ss_dssp EECCTTCBHHHHHHH-----HCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCST
T ss_pred EecCCCCCHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEcCCCCEEEEeccCceecccC
Confidence 444444421 2358888888888888776 46789999999876422
Q ss_pred CccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHH-hHhhhcCChhHHHH
Q 042825 523 GKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATW-FQKMHKNHDTFQMA 601 (631)
Q Consensus 523 ~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~-~~~~~~~~~~l~~~ 601 (631)
. .......||+.|+|||.+.+..++.++||||+|+++|||++|+.||......+ ....+... .......++.+.++
T Consensus 169 ~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l 245 (294)
T 2rku_A 169 G--ERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKE-TYLRIKKNEYSIPKHINPVAASL 245 (294)
T ss_dssp T--CCBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHH-HHHHHHTTCCCCCTTSCHHHHHH
T ss_pred c--cccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHhhccCCCccccCHHHHHH
Confidence 2 12344679999999999998889999999999999999999999998643221 11111110 00011224678999
Q ss_pred HHhhcCCChhhHHhHHHHHHH
Q 042825 602 IDKTIQLDEENLANVSTVAEL 622 (631)
Q Consensus 602 id~~L~~d~~~r~~~~~vl~l 622 (631)
+.+|+..||.+|+++.++++-
T Consensus 246 i~~~l~~~p~~Rps~~~ll~~ 266 (294)
T 2rku_A 246 IQKMLQTDPTARPTINELLND 266 (294)
T ss_dssp HHHHTCSSGGGSCCGGGGGGS
T ss_pred HHHHcccChhhCcCHHHHhhC
Confidence 999999999999999987753
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.87 E-value=1.2e-22 Score=211.21 Aligned_cols=204 Identities=17% Similarity=0.244 Sum_probs=163.5
Q ss_pred CCCChhhHHHHHHHHHhCC-CCCCC--CCC-----CCCCCCccceeeC---------CCCCeEEEEeCCCCCcccCcchh
Q 042825 55 SNQSRPDAAVMQDLKASFV-IPKRL--KWS-----DPDPCQWSHVICS---------DDGQVTNIELQDQNRKGTVPPIL 117 (631)
Q Consensus 55 ~~~~~~~~~~l~~~k~~~~-~~~~~--~w~-----~~~~C~w~gv~C~---------~~~~l~~l~l~~n~l~g~ip~~~ 117 (631)
......+..+|.+||..+. ++..+ .|. ..++|.|.|+.|+ ...+|+.|+|++|+++ .+|+.+
T Consensus 22 ~~~~~~~~~aLl~~k~~~~~~~~~~~~~w~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~l~~L~L~~n~l~-~lp~~l 100 (328)
T 4fcg_A 22 STALRPYHDVLSQWQRHYNADRNRWHSAWRQANSNNPQIETRTGRALKATADLLEDATQPGRVALELRSVPLP-QFPDQA 100 (328)
T ss_dssp -CCCCCHHHHHHHHHHHHHHCCTTHHHHHHHHTTTCTTSCCSHHHHHHHHHHHHHHHTSTTCCEEEEESSCCS-SCCSCG
T ss_pred cccCchHHHHHHHHHHhccCCchhhhhhhcccccccccccccCCcchhhhHHHHhcccccceeEEEccCCCch-hcChhh
Confidence 3345678899999999873 44322 572 4578999999995 2368999999999999 899999
Q ss_pred cCCccCceeecccCcccCCCCcCcc---cccccccccccceecCCCCCCcCCCCCCcEEEccCCcccccCCCCCCC--Cc
Q 042825 118 KKLSSMAVMYLENNQLRGPIPSLVG---SLEFFSAYEANISGTIPDFIGTDTFPQLSYLDLGNNNLQGTIPSSFGM--PF 192 (631)
Q Consensus 118 ~~l~~L~~L~L~~N~l~g~lP~~~~---~L~~L~l~~n~l~g~ip~~~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~--~~ 192 (631)
+++++|++|+|++|.|+ .+|..++ +|++|++++|+++ .+|..++ .+++|++|+|++|++.|.+|..++. ..
T Consensus 101 ~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~--~l~~L~~L~L~~n~~~~~~p~~~~~~~~~ 176 (328)
T 4fcg_A 101 FRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIA--SLNRLRELSIRACPELTELPEPLASTDAS 176 (328)
T ss_dssp GGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGG--GCTTCCEEEEEEETTCCCCCSCSEEEC-C
T ss_pred hhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHh--cCcCCCEEECCCCCCccccChhHhhccch
Confidence 99999999999999999 8998776 8999999999999 8899988 8999999999999999999987631 11
Q ss_pred cCcCCCCCCCEEEeecCcCcccCChhhccCCCCCCEEEccCCCCcccCCCCCCCCceEEeecCCCcccCCCCC
Q 042825 193 ADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNNLLQGPTPRFNNSKLTVDMRTGSNCFCLDDPG 265 (631)
Q Consensus 193 ~~~~~l~~L~~L~L~~N~l~g~iP~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~~~~~~l~~~~n~~~~~~~~ 265 (631)
..++++++|++|+|++|+++ .+|.. ++.+++|+.|+|++|.+++.++.+........+++++|.+.+.+|.
T Consensus 177 ~~~~~l~~L~~L~L~~n~l~-~lp~~-l~~l~~L~~L~L~~N~l~~l~~~l~~l~~L~~L~Ls~n~~~~~~p~ 247 (328)
T 4fcg_A 177 GEHQGLVNLQSLRLEWTGIR-SLPAS-IANLQNLKSLKIRNSPLSALGPAIHHLPKLEELDLRGCTALRNYPP 247 (328)
T ss_dssp CCEEESTTCCEEEEEEECCC-CCCGG-GGGCTTCCEEEEESSCCCCCCGGGGGCTTCCEEECTTCTTCCBCCC
T ss_pred hhhccCCCCCEEECcCCCcC-cchHh-hcCCCCCCEEEccCCCCCcCchhhccCCCCCEEECcCCcchhhhHH
Confidence 12445888888888888888 78865 7888888888888888887666554444555677788888776664
|
| >3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=6.9e-22 Score=200.56 Aligned_cols=203 Identities=20% Similarity=0.266 Sum_probs=147.4
Q ss_pred hcCCcccceeecCCCceEEEEEEecC----CcEEEEEEEecCCCCHHHHHHHHHHHHHHhc-------------------
Q 042825 416 ATNNFSEENRLGRGGVGTVYKGELKD----GTEVGVKRMELGSVTEQGIAQFESEITVLTK------------------- 472 (631)
Q Consensus 416 ~t~~f~~~~~iG~G~fg~Vyk~~~~~----g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~------------------- 472 (631)
..++|...+.||+|+||+||+|+... +..||||++.... .....++|.+|++++.+
T Consensus 10 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~ 88 (281)
T 3cc6_A 10 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDC-TLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEEPTW 88 (281)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTS-CHHHHHHHHHHHHHHHHHCCTTBCCEEEEECSSSCE
T ss_pred cccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEeccccc-CchHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCE
Confidence 45678999999999999999998643 3469999987643 34566789999998875
Q ss_pred --------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccC
Q 042825 473 --------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVP 520 (631)
Q Consensus 473 --------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~ 520 (631)
++|.+++.. ....+++.....++.+++.| +.+||+|||+++...
T Consensus 89 ~v~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 164 (281)
T 3cc6_A 89 IIMELYPYGELGHYLER----NKNSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYIE 164 (281)
T ss_dssp EEEECCTTCBHHHHHHH----HTTTCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEEETTEEEECCCCGGGCC-
T ss_pred EEEecCCCCCHHHHHHh----ccccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEECCCCcEEeCccCCCcccc
Confidence 566666642 22457888888888888766 457899999998764
Q ss_pred CCCccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChHHHHHHHHHhH--hhhcCChh
Q 042825 521 ENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT-GRKVVDATHSDPEYIIHLATWFQ--KMHKNHDT 597 (631)
Q Consensus 521 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~Ellt-G~~P~~~~~~~~~~~~~l~~~~~--~~~~~~~~ 597 (631)
... ........+|+.|+|||++.+..++.++|||||||++|||+| |+.||........ ...+..... .....++.
T Consensus 165 ~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 242 (281)
T 3cc6_A 165 DED-YYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDV-IGVLEKGDRLPKPDLCPPV 242 (281)
T ss_dssp ---------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGGH-HHHHHHTCCCCCCTTCCHH
T ss_pred ccc-ccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHHH-HHHHhcCCCCCCCCCCCHH
Confidence 221 122334567889999999988899999999999999999999 9999976543321 111111110 11122467
Q ss_pred HHHHHHhhcCCChhhHHhHHHHHHHHHh
Q 042825 598 FQMAIDKTIQLDEENLANVSTVAELGDH 625 (631)
Q Consensus 598 l~~~id~~L~~d~~~r~~~~~vl~lal~ 625 (631)
+.+++.+|+..||.+|+++.++++....
T Consensus 243 l~~li~~~l~~~p~~Rps~~ell~~L~~ 270 (281)
T 3cc6_A 243 LYTLMTRCWDYDPSDRPRFTELVCSLSD 270 (281)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred HHHHHHHHccCCchhCcCHHHHHHHHHH
Confidence 9999999999999999999998875443
|
| >3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=1.2e-22 Score=211.08 Aligned_cols=199 Identities=24% Similarity=0.311 Sum_probs=142.6
Q ss_pred CCcccceeecCCCceEEEEEEec-CCcE----EEEEEEecCCCCHHHHHHHHHHHHHHhc--------------------
Q 042825 418 NNFSEENRLGRGGVGTVYKGELK-DGTE----VGVKRMELGSVTEQGIAQFESEITVLTK-------------------- 472 (631)
Q Consensus 418 ~~f~~~~~iG~G~fg~Vyk~~~~-~g~~----vAvK~l~~~~~~~~~~~~~~~Ei~~l~~-------------------- 472 (631)
++|...+.||+|+||+||+|+.. +++. ||+|.+..... ....+++.+|+.++.+
T Consensus 13 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~ 91 (325)
T 3kex_A 13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSG-RQSFQAVTDHMLAIGSLDHAHIVRLLGLCPGSSLQL 91 (325)
T ss_dssp TTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTS-CSCBCSCCHHHHHHHTCCCTTBCCEEEEECBSSEEE
T ss_pred hHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEecccccc-HHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCccEE
Confidence 47889999999999999999965 3443 88888754321 1223456778777764
Q ss_pred -------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCC
Q 042825 473 -------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPE 521 (631)
Q Consensus 473 -------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~ 521 (631)
|+|.+++.. ....+++.....++.+++.| +.+||+|||+++....
T Consensus 92 v~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~ 167 (325)
T 3kex_A 92 VTQYLPLGSLLDHVRQ----HRGALGPQLLLNWGVQIAKGMYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPP 167 (325)
T ss_dssp EEECCTTCBSHHHHHS----SGGGSCTTHHHHHHHHHHHHHHHHHHTTCCCSCCSSTTEEESSSSCEEECSCSGGGGSCC
T ss_pred EEEeCCCCCHHHHHHH----ccccCCHHHHHHHHHHHHHHHHHHHhCCCCCCccchheEEECCCCeEEECCCCcccccCc
Confidence 566666642 22357777888888887765 5678999999998754
Q ss_pred CCccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChHHHHHHHHHhHh---hhcCChh
Q 042825 522 NGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT-GRKVVDATHSDPEYIIHLATWFQK---MHKNHDT 597 (631)
Q Consensus 522 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~Ellt-G~~P~~~~~~~~~~~~~l~~~~~~---~~~~~~~ 597 (631)
...........||..|+|||++.+..++.++|||||||++|||+| |+.||.+...... ......... ....+.+
T Consensus 168 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 245 (325)
T 3kex_A 168 DDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEV--PDLLEKGERLAQPQICTID 245 (325)
T ss_dssp CTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTHH--HHHHHTTCBCCCCTTBCTT
T ss_pred ccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHHHH--HHHHHcCCCCCCCCcCcHH
Confidence 433333455678899999999998999999999999999999999 9999987654421 111111111 1112457
Q ss_pred HHHHHHhhcCCChhhHHhHHHHHHHH
Q 042825 598 FQMAIDKTIQLDEENLANVSTVAELG 623 (631)
Q Consensus 598 l~~~id~~L~~d~~~r~~~~~vl~la 623 (631)
+.+++.+|+..||.+|+++.++++..
T Consensus 246 ~~~li~~~l~~dp~~Rps~~el~~~l 271 (325)
T 3kex_A 246 VYMVMVKCWMIDENIRPTFKELANEF 271 (325)
T ss_dssp TTHHHHHHTCSCTTTSCCHHHHHHHH
T ss_pred HHHHHHHHcCCChhhCcCHHHHHHHH
Confidence 89999999999999999999988753
|
| >3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=99.87 E-value=9.1e-23 Score=213.36 Aligned_cols=210 Identities=16% Similarity=0.193 Sum_probs=143.2
Q ss_pred HHhhcCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCC---CCHHHHHHHHHHHHHHhc----------------
Q 042825 413 LRNATNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGS---VTEQGIAQFESEITVLTK---------------- 472 (631)
Q Consensus 413 l~~~t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~---~~~~~~~~~~~Ei~~l~~---------------- 472 (631)
+....++|...+.||+|+||.||+|+.. +++.||+|++.... ......+++.+|++++.+
T Consensus 21 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~ 100 (345)
T 3hko_A 21 LLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDE 100 (345)
T ss_dssp HHHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred hhhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccC
Confidence 3456678999999999999999999975 58899999986532 123456789999999876
Q ss_pred ------------CChhHHhHhhhhcC-----------------------------------CCCCCHHHHHHHHHHhhcC
Q 042825 473 ------------GTLGRHLFNWEEEG-----------------------------------LEPLEWNTRLNIALDVARG 505 (631)
Q Consensus 473 ------------gsL~~~L~~~~~~~-----------------------------------~~~L~~~~~~~I~~~ia~g 505 (631)
|+|.+++..+.... ...+++.....|+.+++.|
T Consensus 101 ~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~ 180 (345)
T 3hko_A 101 QYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSA 180 (345)
T ss_dssp SEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHH
T ss_pred CeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHH
Confidence 56666553110000 0112344455666666655
Q ss_pred ------------------------C--CcEEEeeccccccCCCCc--cccccccccCccccccccccc--CCCCchhhHH
Q 042825 506 ------------------------D--DMRVADFGLVRLVPENGK--HSILTKVAGTFGYLAPEYIVT--GRITAKVDVY 555 (631)
Q Consensus 506 ------------------------~--~~kl~DFGla~~~~~~~~--~~~~~~~~gt~~Y~aPE~~~~--~~~~~k~DVw 555 (631)
+ .+||+|||+++....... ........||+.|+|||++.+ ..++.++|||
T Consensus 181 l~~LH~~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Diw 260 (345)
T 3hko_A 181 LHYLHNQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAW 260 (345)
T ss_dssp HHHHHHTTEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHHHHH
T ss_pred HHHHHHCCccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHHHHH
Confidence 2 689999999987632211 112345679999999999865 6789999999
Q ss_pred HHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHh-----HhhhcCChhHHHHHHhhcCCChhhHHhHHHHHHHH
Q 042825 556 SFGMILMDLITGRKVVDATHSDPEYIIHLATWF-----QKMHKNHDTFQMAIDKTIQLDEENLANVSTVAELG 623 (631)
Q Consensus 556 S~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~-----~~~~~~~~~l~~~id~~L~~d~~~r~~~~~vl~la 623 (631)
||||++|||++|+.||.+....+. ...+.... ......++++.+++.+||..||.+|+++.++++--
T Consensus 261 slG~il~el~~g~~pf~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~hp 332 (345)
T 3hko_A 261 SAGVLLHLLLMGAVPFPGVNDADT-ISQVLNKKLCFENPNYNVLSPLARDLLSNLLNRNVDERFDAMRALQHP 332 (345)
T ss_dssp HHHHHHHHHHHSSCSSCCSSHHHH-HHHHHHCCCCTTSGGGGGSCHHHHHHHHHHSCSCTTTSCCHHHHHHSH
T ss_pred HHHHHHHHHHHCCCCCCCCChHHH-HHHHHhcccccCCcccccCCHHHHHHHHHHcCCChhHCCCHHHHhcCh
Confidence 999999999999999986543211 11111110 00111356899999999999999999999988643
|
| >3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A | Back alignment and structure |
|---|
Probab=99.87 E-value=7e-23 Score=217.34 Aligned_cols=196 Identities=13% Similarity=0.112 Sum_probs=136.9
Q ss_pred hcCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCC-CHHHHHHHHHHHHHHhc---------------------
Q 042825 416 ATNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSV-TEQGIAQFESEITVLTK--------------------- 472 (631)
Q Consensus 416 ~t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~-~~~~~~~~~~Ei~~l~~--------------------- 472 (631)
..++|...+.||+|+||+||+|+.. +|+.||||++..... .....+.+.+|++++..
T Consensus 71 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~ 150 (377)
T 3byv_A 71 RPRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFD 150 (377)
T ss_dssp CCEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSE
T ss_pred CCceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhh
Confidence 3567889999999999999999964 699999999975422 33456778899854432
Q ss_pred ---------------------------------CChhHHhHhhhh--cCCCCCCHHHHHHHHHHhhcC------------
Q 042825 473 ---------------------------------GTLGRHLFNWEE--EGLEPLEWNTRLNIALDVARG------------ 505 (631)
Q Consensus 473 ---------------------------------gsL~~~L~~~~~--~~~~~L~~~~~~~I~~~ia~g------------ 505 (631)
|+|.+++..... .....+.|..+..|+.+++.|
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHr 230 (377)
T 3byv_A 151 LVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHT 230 (377)
T ss_dssp EEECTTSCSEEEC------CEEESEEEEEECCSEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHTTEECS
T ss_pred hhhccCCccccccccCCCceEEEEEEEEEeccCCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhCCeecC
Confidence 122222221100 001123357777888888876
Q ss_pred ------------CCcEEEeeccccccCCCCccccccccccCcccccccccccC-----------CCCchhhHHHHHHHHH
Q 042825 506 ------------DDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTG-----------RITAKVDVYSFGMILM 562 (631)
Q Consensus 506 ------------~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-----------~~~~k~DVwS~GvvL~ 562 (631)
+.+||+|||+++... . ......| +.|+|||++.+. .++.++|||||||++|
T Consensus 231 Dikp~NIll~~~~~~kL~DFG~a~~~~--~---~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~ 304 (377)
T 3byv_A 231 YLRPVDIVLDQRGGVFLTGFEHLVRDG--A---RVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIY 304 (377)
T ss_dssp CCCGGGEEECTTCCEEECCGGGCEETT--C---EEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHHH
T ss_pred CCCHHHEEEcCCCCEEEEechhheecC--C---cccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHHHH
Confidence 568999999998642 1 2345678 999999999887 8999999999999999
Q ss_pred HHHcCCCCCCCCCCChHHHHHHHHHhHhhhcCChhHHHHHHhhcCCChhhHHhHHHHHH
Q 042825 563 DLITGRKVVDATHSDPEYIIHLATWFQKMHKNHDTFQMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 563 ElltG~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
||+||+.||....... .+..........++++.+++.+||..||.+|+++.++++
T Consensus 305 elltg~~Pf~~~~~~~----~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~ 359 (377)
T 3byv_A 305 WIWCADLPITKDAALG----GSEWIFRSCKNIPQPVRALLEGFLRYPKEDRLLPLQAME 359 (377)
T ss_dssp HHHHSSCCC------C----CSGGGGSSCCCCCHHHHHHHHHHTCSSGGGCCCHHHHHT
T ss_pred HHHHCCCCCccccccc----chhhhhhhccCCCHHHHHHHHHHcCCCchhCCCHHHHhh
Confidence 9999999997543211 011111111233578999999999999999999999875
|
| >2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=9.2e-22 Score=204.76 Aligned_cols=211 Identities=18% Similarity=0.245 Sum_probs=154.2
Q ss_pred HhhcCCcccceeecCCCceEEEEEEecC------CcEEEEEEEecCCCCHHHHHHHHHHHHHHhc---------------
Q 042825 414 RNATNNFSEENRLGRGGVGTVYKGELKD------GTEVGVKRMELGSVTEQGIAQFESEITVLTK--------------- 472 (631)
Q Consensus 414 ~~~t~~f~~~~~iG~G~fg~Vyk~~~~~------g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~--------------- 472 (631)
+-..++|...+.||+|+||.||+|+... +..||||++.... .....+.+.+|++++.+
T Consensus 42 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~ 120 (333)
T 2i1m_A 42 EFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTA-HADEKEALMSELKIMSHLGQHENIVNLLGACT 120 (333)
T ss_dssp BCCTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTC-CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred cCCHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhccccc-ChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEe
Confidence 3456789999999999999999998642 3489999997643 34456788999988864
Q ss_pred --------------CChhHHhHhhhhc---------CCCCCCHHHHHHHHHHhhcC------------------------
Q 042825 473 --------------GTLGRHLFNWEEE---------GLEPLEWNTRLNIALDVARG------------------------ 505 (631)
Q Consensus 473 --------------gsL~~~L~~~~~~---------~~~~L~~~~~~~I~~~ia~g------------------------ 505 (631)
|+|.+++...... ....+++.....++.+++.|
T Consensus 121 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~ 200 (333)
T 2i1m_A 121 HGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNG 200 (333)
T ss_dssp SSSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGCEEEGG
T ss_pred cCCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCcccCCcccceEEECCC
Confidence 4777776542210 12357888888888888876
Q ss_pred CCcEEEeeccccccCCCCccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChHHHHHH
Q 042825 506 DDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT-GRKVVDATHSDPEYIIHL 584 (631)
Q Consensus 506 ~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~Ellt-G~~P~~~~~~~~~~~~~l 584 (631)
+.+||+|||+++...............||+.|+|||.+.+..++.++|||||||++|||+| |+.||.+..........+
T Consensus 201 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~ 280 (333)
T 2i1m_A 201 HVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLV 280 (333)
T ss_dssp GEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSHHHHHHH
T ss_pred CeEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhHHHHHHH
Confidence 3468999999987643332223344567889999999998899999999999999999999 999998765443222111
Q ss_pred HHHhHh--hhcCChhHHHHHHhhcCCChhhHHhHHHHHHHHHh
Q 042825 585 ATWFQK--MHKNHDTFQMAIDKTIQLDEENLANVSTVAELGDH 625 (631)
Q Consensus 585 ~~~~~~--~~~~~~~l~~~id~~L~~d~~~r~~~~~vl~lal~ 625 (631)
..-... ....++++.+++..|+..||.+||++.++++....
T Consensus 281 ~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~ 323 (333)
T 2i1m_A 281 KDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQE 323 (333)
T ss_dssp HHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred hcCCCCCCCCCCCHHHHHHHHHHhccChhhCcCHHHHHHHHHH
Confidence 111110 11124679999999999999999999998875443
|
| >3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ... | Back alignment and structure |
|---|
Probab=99.87 E-value=9.9e-22 Score=204.14 Aligned_cols=189 Identities=17% Similarity=0.264 Sum_probs=139.4
Q ss_pred cCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc-----------------------
Q 042825 417 TNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK----------------------- 472 (631)
Q Consensus 417 t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~----------------------- 472 (631)
.++|+..+.||+|+||+||+|+.. +++.||||++... ..+.+.+|++++.+
T Consensus 35 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-----~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~ 109 (330)
T 3nsz_A 35 QDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV-----KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPA 109 (330)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC-----CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEE
T ss_pred CCceEEEEEecccCCeEEEEEEECCCCcEEEEEEeccc-----chHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceE
Confidence 367899999999999999999864 6899999998743 23668889888765
Q ss_pred --------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC-------------------------CCcEEEeecccccc
Q 042825 473 --------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG-------------------------DDMRVADFGLVRLV 519 (631)
Q Consensus 473 --------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g-------------------------~~~kl~DFGla~~~ 519 (631)
+++.+++ ..+.+.....++.+++.| ..+||+|||+++..
T Consensus 110 lv~e~~~~~~l~~~~--------~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~ 181 (330)
T 3nsz_A 110 LVFEHVNNTDFKQLY--------QTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFY 181 (330)
T ss_dssp EEEECCCCCCHHHHG--------GGCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTTEEEECCCTTCEEC
T ss_pred EEEeccCchhHHHHH--------HhCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEcCCCCEEEEEeCCCceEc
Confidence 1222221 236777777888777765 25789999999876
Q ss_pred CCCCccccccccccCccccccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHH---------HhH
Q 042825 520 PENGKHSILTKVAGTFGYLAPEYIVT-GRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLAT---------WFQ 589 (631)
Q Consensus 520 ~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~---------~~~ 589 (631)
.... ......||..|+|||++.+ ..++.++||||+||++|||++|+.||............+.. +..
T Consensus 182 ~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 258 (330)
T 3nsz_A 182 HPGQ---EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYID 258 (330)
T ss_dssp CTTC---CCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHH
T ss_pred CCCC---ccccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHHH
Confidence 4322 2345679999999999877 66999999999999999999999999654333222111111 110
Q ss_pred hh-----------------------------hcCChhHHHHHHhhcCCChhhHHhHHHHHH
Q 042825 590 KM-----------------------------HKNHDTFQMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 590 ~~-----------------------------~~~~~~l~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
.. ...++++.+++.+||..||.+|+++.++++
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~ 319 (330)
T 3nsz_A 259 KYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAME 319 (330)
T ss_dssp HTTCCCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred HhccccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 00 003578899999999999999999999876
|
| >3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.87 E-value=1e-21 Score=203.79 Aligned_cols=195 Identities=25% Similarity=0.388 Sum_probs=138.0
Q ss_pred cCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhcC----------------------
Q 042825 417 TNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTKG---------------------- 473 (631)
Q Consensus 417 t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~g---------------------- 473 (631)
.++|+..+.||+|+||.||+|+.+ +|+.||||++.... .....+.+.+|++++.+-
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~ 83 (332)
T 3qd2_B 5 LTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPN-RELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQE 83 (332)
T ss_dssp HHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCS-TTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHH
T ss_pred hhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCC-chhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhh
Confidence 457899999999999999999976 69999999997644 334567899999998761
Q ss_pred ---------------------------------------------------------------ChhHHhHhhhhcCCCCC
Q 042825 474 ---------------------------------------------------------------TLGRHLFNWEEEGLEPL 490 (631)
Q Consensus 474 ---------------------------------------------------------------sL~~~L~~~~~~~~~~L 490 (631)
+|.+++.. .......
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~--~~~~~~~ 161 (332)
T 3qd2_B 84 EMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNR--RCSLEDR 161 (332)
T ss_dssp HHHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHT--CCSGGGS
T ss_pred hhhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhc--ccCccch
Confidence 22222211 0111234
Q ss_pred CHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCCcc----------ccccccccCcc
Q 042825 491 EWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENGKH----------SILTKVAGTFG 536 (631)
Q Consensus 491 ~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~~~----------~~~~~~~gt~~ 536 (631)
.+.....|+.+++.| +.+||+|||+++........ .......||+.
T Consensus 162 ~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~ 241 (332)
T 3qd2_B 162 EHGVCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKL 241 (332)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CGG
T ss_pred hhHHHHHHHHHHHHHHHHHHhCCeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCcC
Confidence 555667788777765 56899999999887532211 12244679999
Q ss_pred cccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHhHh------hhcCChhHHHHHHhhcCCCh
Q 042825 537 YLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQK------MHKNHDTFQMAIDKTIQLDE 610 (631)
Q Consensus 537 Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~~~------~~~~~~~l~~~id~~L~~d~ 610 (631)
|+|||++.+..++.++|||||||++|||++|..|+.. ...+...... .....+++.+++.+||..||
T Consensus 242 y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p 314 (332)
T 3qd2_B 242 YMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQME-------RVRIITDVRNLKFPLLFTQKYPQEHMMVQDMLSPSP 314 (332)
T ss_dssp GSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHH-------HHHHHHHHHTTCCCHHHHHHCHHHHHHHHHHHCSSG
T ss_pred ccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhH-------HHHHHHHhhccCCCcccccCChhHHHHHHHHccCCC
Confidence 9999999999999999999999999999998777531 1111111111 11123567899999999999
Q ss_pred hhHHhHHHHHH
Q 042825 611 ENLANVSTVAE 621 (631)
Q Consensus 611 ~~r~~~~~vl~ 621 (631)
.+|+++.++++
T Consensus 315 ~~Rps~~~~l~ 325 (332)
T 3qd2_B 315 TERPEATDIIE 325 (332)
T ss_dssp GGSCCHHHHHH
T ss_pred CcCCCHHHHhh
Confidence 99999999876
|
| >3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.87 E-value=7.6e-23 Score=213.53 Aligned_cols=193 Identities=18% Similarity=0.241 Sum_probs=145.7
Q ss_pred hcCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCH------HHHHHHHHHHHHHhc----------------
Q 042825 416 ATNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTE------QGIAQFESEITVLTK---------------- 472 (631)
Q Consensus 416 ~t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~------~~~~~~~~Ei~~l~~---------------- 472 (631)
..++|...+.||+|+||+||+|+.. +++.||||++....... ...+.+.+|++++.+
T Consensus 22 ~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~ 101 (335)
T 3dls_A 22 YSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQ 101 (335)
T ss_dssp HHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECS
T ss_pred cccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeC
Confidence 4568999999999999999999965 68999999998654321 133457788888876
Q ss_pred ------------C-ChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeecc
Q 042825 473 ------------G-TLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGL 515 (631)
Q Consensus 473 ------------g-sL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGl 515 (631)
| ++.+++. ....+++.....|+.+++.| +.+||+|||+
T Consensus 102 ~~~~lv~e~~~~g~~l~~~~~-----~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~ 176 (335)
T 3dls_A 102 GFFQLVMEKHGSGLDLFAFID-----RHPRLDEPLASYIFRQLVSAVGYLRLKDIIHRDIKDENIVIAEDFTIKLIDFGS 176 (335)
T ss_dssp SEEEEEEECCTTSCBHHHHHH-----TCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTT
T ss_pred CEEEEEEEeCCCCccHHHHHH-----hcCCCCHHHHHHHHHHHHHHHHHHHhCCeEEeccCHHHEEEcCCCcEEEeeccc
Confidence 2 4444442 23458898898898888876 4689999999
Q ss_pred ccccCCCCccccccccccCcccccccccccCCC-CchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHhHhhhcC
Q 042825 516 VRLVPENGKHSILTKVAGTFGYLAPEYIVTGRI-TAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQKMHKN 594 (631)
Q Consensus 516 a~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~-~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~~~~~~~ 594 (631)
++...... ......||+.|+|||++.+..+ +.++|||||||++|||++|+.||...... ...........
T Consensus 177 a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~------~~~~~~~~~~~ 247 (335)
T 3dls_A 177 AAYLERGK---LFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEET------VEAAIHPPYLV 247 (335)
T ss_dssp CEECCTTC---CBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGG------TTTCCCCSSCC
T ss_pred ceECCCCC---ceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHHH------HhhccCCCccc
Confidence 98764322 2344679999999999988776 88999999999999999999999742210 00001111223
Q ss_pred ChhHHHHHHhhcCCChhhHHhHHHHHHH
Q 042825 595 HDTFQMAIDKTIQLDEENLANVSTVAEL 622 (631)
Q Consensus 595 ~~~l~~~id~~L~~d~~~r~~~~~vl~l 622 (631)
++++.+++.++|..||.+|+++.++++-
T Consensus 248 ~~~l~~li~~~L~~dP~~Rps~~ell~h 275 (335)
T 3dls_A 248 SKELMSLVSGLLQPVPERRTTLEKLVTD 275 (335)
T ss_dssp CHHHHHHHHHHTCSSGGGSCCHHHHHHC
T ss_pred CHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 5789999999999999999999988763
|
| >1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B | Back alignment and structure |
|---|
Probab=99.87 E-value=5.5e-22 Score=205.61 Aligned_cols=200 Identities=20% Similarity=0.263 Sum_probs=143.9
Q ss_pred hhcCCcccceeecCCCceEEEEEEec--CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc--------------------
Q 042825 415 NATNNFSEENRLGRGGVGTVYKGELK--DGTEVGVKRMELGSVTEQGIAQFESEITVLTK-------------------- 472 (631)
Q Consensus 415 ~~t~~f~~~~~iG~G~fg~Vyk~~~~--~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~-------------------- 472 (631)
.+.++|...+.||+|+||.||+|+.. +|+.||||++............+.+|++++..
T Consensus 8 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~ 87 (326)
T 1blx_A 8 RADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSR 87 (326)
T ss_dssp CGGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEE
T ss_pred CchhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecc
Confidence 45678999999999999999999973 58899999987543222122334555554432
Q ss_pred ---------------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEee
Q 042825 473 ---------------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADF 513 (631)
Q Consensus 473 ---------------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DF 513 (631)
|+|.+++.. .....+++.....++.+++.| +.+||+||
T Consensus 88 ~~~~~~~~lv~e~~~~~L~~~l~~---~~~~~~~~~~~~~~~~qi~~~l~~lH~~gi~H~dlkp~Nili~~~~~~kl~Df 164 (326)
T 1blx_A 88 TDRETKLTLVFEHVDQDLTTYLDK---VPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADF 164 (326)
T ss_dssp CSSEEEEEEEEECCSCBHHHHHHH---SCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECSC
T ss_pred cCCCceEEEEEecCCCCHHHHHHh---cccCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHHHeEEcCCCCEEEecC
Confidence 445555532 222348888888888888765 56789999
Q ss_pred ccccccCCCCccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHh-----
Q 042825 514 GLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWF----- 588 (631)
Q Consensus 514 Gla~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~----- 588 (631)
|+++.... ........||..|+|||++.+..++.++|||||||++|||++|+.||.+..... ....+....
T Consensus 165 g~~~~~~~---~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-~~~~i~~~~~~~~~ 240 (326)
T 1blx_A 165 GLARIYSF---QMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVD-QLGKILDVIGLPGE 240 (326)
T ss_dssp CSCCCCCG---GGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCCCCG
T ss_pred cccccccC---CCCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHH-HHHHHHHHcCCCCc
Confidence 99987631 123445679999999999998899999999999999999999999998653221 111121110
Q ss_pred ----H-------------------hhhcCChhHHHHHHhhcCCChhhHHhHHHHHH
Q 042825 589 ----Q-------------------KMHKNHDTFQMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 589 ----~-------------------~~~~~~~~l~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
. .....++.+.+++.+||..||.+|+++.++++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 296 (326)
T 1blx_A 241 EDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 296 (326)
T ss_dssp GGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred ccCccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 0 00112457889999999999999999998875
|
| >1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.87 E-value=8.7e-22 Score=200.55 Aligned_cols=204 Identities=17% Similarity=0.296 Sum_probs=150.9
Q ss_pred CCcccce-eecCCCceEEEEEEec---CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc---------------------
Q 042825 418 NNFSEEN-RLGRGGVGTVYKGELK---DGTEVGVKRMELGSVTEQGIAQFESEITVLTK--------------------- 472 (631)
Q Consensus 418 ~~f~~~~-~iG~G~fg~Vyk~~~~---~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~--------------------- 472 (631)
++|...+ .||+|+||.||+|+.. ++..||||++.... .....+++.+|++++.+
T Consensus 9 ~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~lv 87 (287)
T 1u59_A 9 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGT-EKADTEEMMREAQIMHQLDNPYIVRLIGVCQAEALMLV 87 (287)
T ss_dssp GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSC-CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEESSSEEEE
T ss_pred HHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCcc-chhHHHHHHHHHHHHHhCCCCCEeEEEEEecCCCcEEE
Confidence 4555555 9999999999999864 57889999997653 44567789999999876
Q ss_pred ------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCC
Q 042825 473 ------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPEN 522 (631)
Q Consensus 473 ------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~ 522 (631)
++|.+++. .....+++.....++.+++.| +.+||+|||+++.....
T Consensus 88 ~e~~~~~~L~~~l~----~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~ 163 (287)
T 1u59_A 88 MEMAGGGPLHKFLV----GKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGAD 163 (287)
T ss_dssp EECCTTEEHHHHHT----TCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEEETTEEEECCCTTCEECTTC
T ss_pred EEeCCCCCHHHHHH----hCCccCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCchheEEEcCCCCEEECcccceeeeccC
Confidence 35555442 234568999999999888876 45789999999877432
Q ss_pred Ccc-ccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChHHHHHHHHHh--HhhhcCChhH
Q 042825 523 GKH-SILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT-GRKVVDATHSDPEYIIHLATWF--QKMHKNHDTF 598 (631)
Q Consensus 523 ~~~-~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~Ellt-G~~P~~~~~~~~~~~~~l~~~~--~~~~~~~~~l 598 (631)
... .......||+.|+|||++.+..++.++|||||||++|||+| |+.||....... ....+.... ......++++
T Consensus 164 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~-~~~~i~~~~~~~~~~~~~~~l 242 (287)
T 1u59_A 164 DSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPE-VMAFIEQGKRMECPPECPPEL 242 (287)
T ss_dssp SCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHH-HHHHHHTTCCCCCCTTCCHHH
T ss_pred cceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHH-HHHHHhcCCcCCCCCCcCHHH
Confidence 221 12233467899999999988889999999999999999999 999998654321 111111110 0111235789
Q ss_pred HHHHHhhcCCChhhHHhHHHHHHHHHhhh
Q 042825 599 QMAIDKTIQLDEENLANVSTVAELGDHCC 627 (631)
Q Consensus 599 ~~~id~~L~~d~~~r~~~~~vl~lal~C~ 627 (631)
.+++..|+..+|.+|+++.++++....+.
T Consensus 243 ~~li~~~l~~~p~~Rps~~~l~~~l~~~~ 271 (287)
T 1u59_A 243 YALMSDCWIYKWEDRPDFLTVEQRMRACY 271 (287)
T ss_dssp HHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 99999999999999999999988766554
|
| >1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A | Back alignment and structure |
|---|
Probab=99.87 E-value=1.5e-21 Score=199.02 Aligned_cols=193 Identities=20% Similarity=0.311 Sum_probs=144.0
Q ss_pred CcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc-------------------------
Q 042825 419 NFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK------------------------- 472 (631)
Q Consensus 419 ~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~------------------------- 472 (631)
.|...+.||+|+||+||+|... ++..||+|++..........+.+.+|++++.+
T Consensus 27 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~l 106 (290)
T 1t4h_A 27 FLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVL 106 (290)
T ss_dssp EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEE
T ss_pred eEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEE
Confidence 4677889999999999999875 58899999998776666777889999999876
Q ss_pred -------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC---------------------------CCcEEEeeccccc
Q 042825 473 -------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG---------------------------DDMRVADFGLVRL 518 (631)
Q Consensus 473 -------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g---------------------------~~~kl~DFGla~~ 518 (631)
|+|.+++.. ...+++.....++.+++.| +.+||+|||+++.
T Consensus 107 v~e~~~~~~L~~~l~~-----~~~~~~~~~~~~~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~ 181 (290)
T 1t4h_A 107 VTELMTSGTLKTYLKR-----FKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATL 181 (290)
T ss_dssp EEECCCSCBHHHHHHH-----HSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGG
T ss_pred EEEecCCCCHHHHHHH-----ccCCCHHHHHHHHHHHHHHHHHHHcCCCCEEECCCCHHHEEEECCCCCEEEeeCCCccc
Confidence 455555532 1357777777777666644 3578999999976
Q ss_pred cCCCCccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHh---HhhhcCC
Q 042825 519 VPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWF---QKMHKNH 595 (631)
Q Consensus 519 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~---~~~~~~~ 595 (631)
.... ......||+.|+|||++. ..++.++||||+||++|||++|+.||............+.... .......
T Consensus 182 ~~~~----~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (290)
T 1t4h_A 182 KRAS----FAKAVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAI 256 (290)
T ss_dssp CCTT----SBEESCSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCCGGGGGCCC
T ss_pred cccc----ccccccCCcCcCCHHHHh-ccCCCcchHHHHHHHHHHHHhCCCCCCCcCcHHHHHHHHhccCCccccCCCCC
Confidence 5321 233467999999999876 5699999999999999999999999986543221111111110 0111223
Q ss_pred hhHHHHHHhhcCCChhhHHhHHHHHH
Q 042825 596 DTFQMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 596 ~~l~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
+++.+++.+||..||.+|+++.++++
T Consensus 257 ~~l~~li~~~l~~dp~~Rps~~ell~ 282 (290)
T 1t4h_A 257 PEVKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp HHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HHHHHHHHHHccCChhhCCCHHHHhh
Confidence 67999999999999999999998875
|
| >2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=3.8e-22 Score=208.14 Aligned_cols=198 Identities=17% Similarity=0.216 Sum_probs=148.4
Q ss_pred cCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCC-CHHHHHHHHHHHHHHhc----------------------
Q 042825 417 TNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSV-TEQGIAQFESEITVLTK---------------------- 472 (631)
Q Consensus 417 t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~-~~~~~~~~~~Ei~~l~~---------------------- 472 (631)
.++|...+.||+|+||.||+++.. +++.||+|++..... .....+.+.+|+.++.+
T Consensus 40 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 119 (335)
T 2owb_A 40 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV 119 (335)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred CCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEE
Confidence 457889999999999999999976 488999999976432 34556788999998876
Q ss_pred ------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCC
Q 042825 473 ------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPEN 522 (631)
Q Consensus 473 ------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~ 522 (631)
++|.+++.. ...+++.....++.+++.| +.+||+|||+++.....
T Consensus 120 ~e~~~~~~L~~~~~~-----~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~ 194 (335)
T 2owb_A 120 LELCRRRSLLELHKR-----RKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYD 194 (335)
T ss_dssp ECCCTTCBHHHHHHH-----HCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEECCST
T ss_pred EecCCCCCHHHHHhc-----cCCCCHHHHHHHHHHHHHHHHHHHHCCCEecCCCchhEEEcCCCCEEEeeccCceecccC
Confidence 445444422 2457888888888888776 46899999999876422
Q ss_pred CccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHh-HhhhcCChhHHHH
Q 042825 523 GKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWF-QKMHKNHDTFQMA 601 (631)
Q Consensus 523 ~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~-~~~~~~~~~l~~~ 601 (631)
. .......||..|+|||++.+..++.++|||||||++|||++|+.||......+ ....+.... ......+.++.++
T Consensus 195 ~--~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l 271 (335)
T 2owb_A 195 G--ERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKE-TYLRIKKNEYSIPKHINPVAASL 271 (335)
T ss_dssp T--CCBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHH-HHHHHHHTCCCCCTTSCHHHHHH
T ss_pred c--ccccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHHH-HHHHHhcCCCCCCccCCHHHHHH
Confidence 2 22345679999999999998899999999999999999999999998643221 111111110 0111224678999
Q ss_pred HHhhcCCChhhHHhHHHHHHH
Q 042825 602 IDKTIQLDEENLANVSTVAEL 622 (631)
Q Consensus 602 id~~L~~d~~~r~~~~~vl~l 622 (631)
+.+|+..||.+|+++.++++-
T Consensus 272 i~~~l~~dp~~Rps~~ell~~ 292 (335)
T 2owb_A 272 IQKMLQTDPTARPTINELLND 292 (335)
T ss_dssp HHHHTCSSGGGSCCGGGGGGS
T ss_pred HHHHccCChhHCcCHHHHhcC
Confidence 999999999999999988764
|
| >1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.86 E-value=4.7e-22 Score=208.43 Aligned_cols=201 Identities=19% Similarity=0.228 Sum_probs=137.2
Q ss_pred hhcCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCH---HHHHHHHHHHHHHhc------------------
Q 042825 415 NATNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTE---QGIAQFESEITVLTK------------------ 472 (631)
Q Consensus 415 ~~t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~---~~~~~~~~Ei~~l~~------------------ 472 (631)
...++|...+.||+|+||.||+|+.. +|+.||||++....... ...+.+.+|++++.+
T Consensus 7 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 86 (346)
T 1ua2_A 7 SRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSN 86 (346)
T ss_dssp ------CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTC
T ss_pred HHhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCc
Confidence 44578999999999999999999975 58999999987543211 112467889998876
Q ss_pred ---------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeecccccc
Q 042825 473 ---------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLV 519 (631)
Q Consensus 473 ---------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~ 519 (631)
+++..++ ......+++.....++.+++.| +.+||+|||+++..
T Consensus 87 ~~lv~e~~~~~l~~~~----~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~ 162 (346)
T 1ua2_A 87 ISLVFDFMETDLEVII----KDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSF 162 (346)
T ss_dssp CEEEEECCSEEHHHHH----TTCCSSCCSSHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCCGGGSTT
T ss_pred eEEEEEcCCCCHHHHH----HhcCcCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHEEEcCCCCEEEEecccceec
Confidence 2232222 2223457777777788777765 56899999999876
Q ss_pred CCCCccccccccccCcccccccccccC-CCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHhH---------
Q 042825 520 PENGKHSILTKVAGTFGYLAPEYIVTG-RITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQ--------- 589 (631)
Q Consensus 520 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~~--------- 589 (631)
... ........||+.|+|||++.+. .++.++|||||||++|||++|+.||.+..... ....+.....
T Consensus 163 ~~~--~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~ 239 (346)
T 1ua2_A 163 GSP--NRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLD-QLTRIFETLGTPTEEQWPD 239 (346)
T ss_dssp TSC--CCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHHHCCCCTTTSSS
T ss_pred cCC--cccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHH-HHHHHHHHcCCCChhhhhh
Confidence 422 2233456799999999998764 48999999999999999999999998653221 1111111100
Q ss_pred --------------------hhhcCChhHHHHHHhhcCCChhhHHhHHHHHHH
Q 042825 590 --------------------KMHKNHDTFQMAIDKTIQLDEENLANVSTVAEL 622 (631)
Q Consensus 590 --------------------~~~~~~~~l~~~id~~L~~d~~~r~~~~~vl~l 622 (631)
.....++++.+++.+||..||.+|+++.++++.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 292 (346)
T 1ua2_A 240 MCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKM 292 (346)
T ss_dssp TTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred hccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcC
Confidence 001123678999999999999999999998764
|
| >2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A | Back alignment and structure |
|---|
Probab=99.86 E-value=1.7e-22 Score=211.41 Aligned_cols=194 Identities=19% Similarity=0.297 Sum_probs=141.5
Q ss_pred hcCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc----------------------
Q 042825 416 ATNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK---------------------- 472 (631)
Q Consensus 416 ~t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~---------------------- 472 (631)
..++|+..+.||+|+||.||+|+.+ +|+.||||++...... +.+|++++.+
T Consensus 20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~------~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~l 93 (342)
T 2qr7_A 20 FTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRD------PTEEIEILLRYGQHPNIITLKDVYDDGKYVYV 93 (342)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTCC------CHHHHHHHHHHTTSTTBCCEEEEEECSSEEEE
T ss_pred ccccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccCC------hHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEE
Confidence 4567999999999999999999976 5899999999765422 2345555433
Q ss_pred -------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC-------------------------C---CcEEEeecccc
Q 042825 473 -------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG-------------------------D---DMRVADFGLVR 517 (631)
Q Consensus 473 -------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g-------------------------~---~~kl~DFGla~ 517 (631)
|+|.+++.. ...+++.....++.+++.| + .+||+|||+++
T Consensus 94 v~E~~~gg~L~~~i~~-----~~~~~~~~~~~~~~qi~~al~~lH~~givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~ 168 (342)
T 2qr7_A 94 VTELMKGGELLDKILR-----QKFFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAK 168 (342)
T ss_dssp EECCCCSCBHHHHHHT-----CTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSSCSGGGEEECCCTTCE
T ss_pred EEeCCCCCcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCCcEeccCCHHHEEEecCCCCcCeEEEEECCCcc
Confidence 566666532 2457888888888887765 1 27999999998
Q ss_pred ccCCCCccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCh-HHHH-HHHHHhHh-----
Q 042825 518 LVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDP-EYII-HLATWFQK----- 590 (631)
Q Consensus 518 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~-~~~~-~l~~~~~~----- 590 (631)
...... ......+||+.|+|||++.+..|+.++||||+||++|||++|+.||....... .... .+......
T Consensus 169 ~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~ 246 (342)
T 2qr7_A 169 QLRAEN--GLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKFSLSGGY 246 (342)
T ss_dssp ECBCTT--CCBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCHHHHHHHHHHCCCCCCSTT
T ss_pred cCcCCC--CceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCHHHHHHHHccCCcccCccc
Confidence 764222 23345689999999999988889999999999999999999999998643221 1111 11110000
Q ss_pred hhcCChhHHHHHHhhcCCChhhHHhHHHHHHH
Q 042825 591 MHKNHDTFQMAIDKTIQLDEENLANVSTVAEL 622 (631)
Q Consensus 591 ~~~~~~~l~~~id~~L~~d~~~r~~~~~vl~l 622 (631)
....++++.++|.++|..||.+|+++.++++-
T Consensus 247 ~~~~s~~~~~li~~~L~~dP~~R~t~~~il~h 278 (342)
T 2qr7_A 247 WNSVSDTAKDLVSKMLHVDPHQRLTAALVLRH 278 (342)
T ss_dssp TTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred cccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 01235789999999999999999999987753
|
| >1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.86 E-value=1.4e-22 Score=213.16 Aligned_cols=198 Identities=18% Similarity=0.267 Sum_probs=138.8
Q ss_pred cCCcccceeecCCCceEEEEEEe----cCCcEEEEEEEecCCC--CHHHHHHHHHHHHHHhc------------------
Q 042825 417 TNNFSEENRLGRGGVGTVYKGEL----KDGTEVGVKRMELGSV--TEQGIAQFESEITVLTK------------------ 472 (631)
Q Consensus 417 t~~f~~~~~iG~G~fg~Vyk~~~----~~g~~vAvK~l~~~~~--~~~~~~~~~~Ei~~l~~------------------ 472 (631)
.++|...+.||+|+||.||+|+. .+|+.||||+++.... .....+.+.+|++++.+
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 132 (355)
T 1vzo_A 53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTET 132 (355)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETT
T ss_pred ccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCc
Confidence 35789999999999999999997 3689999999864321 01122345556655543
Q ss_pred -----------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeecccc
Q 042825 473 -----------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVR 517 (631)
Q Consensus 473 -----------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~ 517 (631)
|+|.+++.. ...+++.....++.+++.| +.+||+|||+++
T Consensus 133 ~~~lv~e~~~~~~L~~~l~~-----~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~ 207 (355)
T 1vzo_A 133 KLHLILDYINGGELFTHLSQ-----RERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSK 207 (355)
T ss_dssp EEEEEECCCCSCBHHHHHHH-----HSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEESCSSEEE
T ss_pred eEEEEeecCCCCCHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCcEEEeeCCCCe
Confidence 577777643 1357888888888887766 567999999998
Q ss_pred ccCCCCccccccccccCccccccccccc--CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHhH-h----
Q 042825 518 LVPENGKHSILTKVAGTFGYLAPEYIVT--GRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQ-K---- 590 (631)
Q Consensus 518 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~--~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~~-~---- 590 (631)
..... ........+||+.|+|||++.+ ..++.++|||||||++|||++|+.||......... ..+..... .
T Consensus 208 ~~~~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~-~~~~~~~~~~~~~~ 285 (355)
T 1vzo_A 208 EFVAD-ETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQ-AEISRRILKSEPPY 285 (355)
T ss_dssp ECCGG-GGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCH-HHHHHHHHHCCCCC
T ss_pred ecccC-CCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccchH-HHHHHHHhccCCCC
Confidence 76322 2223345689999999999985 34789999999999999999999999754322111 11111111 1
Q ss_pred hhcCChhHHHHHHhhcCCChhhHH-----hHHHHHH
Q 042825 591 MHKNHDTFQMAIDKTIQLDEENLA-----NVSTVAE 621 (631)
Q Consensus 591 ~~~~~~~l~~~id~~L~~d~~~r~-----~~~~vl~ 621 (631)
....+..+.+++.+||..||.+|+ ++.++++
T Consensus 286 ~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~ 321 (355)
T 1vzo_A 286 PQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKE 321 (355)
T ss_dssp CTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHT
T ss_pred CcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHc
Confidence 112246789999999999999999 8888765
|
| >2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A | Back alignment and structure |
|---|
Probab=99.86 E-value=8.8e-22 Score=207.95 Aligned_cols=202 Identities=21% Similarity=0.275 Sum_probs=148.1
Q ss_pred HHHHhhcCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCC--CH----HHHHHHHHHHHHHhc-----------
Q 042825 411 QVLRNATNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSV--TE----QGIAQFESEITVLTK----------- 472 (631)
Q Consensus 411 ~~l~~~t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~--~~----~~~~~~~~Ei~~l~~----------- 472 (631)
.......++|...+.||+|+||.||+|+.. +|+.||||++..... .. ...+.+.+|+.++.+
T Consensus 87 ~~~~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~ 166 (365)
T 2y7j_A 87 AAAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLI 166 (365)
T ss_dssp HHHHHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEE
T ss_pred hhhhhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEE
Confidence 334455678999999999999999999986 699999999976431 11 224567888888754
Q ss_pred ------------------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEE
Q 042825 473 ------------------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRV 510 (631)
Q Consensus 473 ------------------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl 510 (631)
++|.+++.. ...+++.....++.+++.| +.+||
T Consensus 167 ~~~~~~~~~~lv~e~~~g~~L~~~l~~-----~~~l~~~~~~~i~~qi~~~L~~LH~~gi~H~Dlkp~NIl~~~~~~ikl 241 (365)
T 2y7j_A 167 DSYESSSFMFLVFDLMRKGELFDYLTE-----KVALSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILLDDNMQIRL 241 (365)
T ss_dssp EEEEBSSEEEEEECCCTTCBHHHHHHH-----HSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEE
T ss_pred EEEeeCCEEEEEEEeCCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEE
Confidence 456665532 2358888888888888875 56899
Q ss_pred EeeccccccCCCCccccccccccCccccccccccc------CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHH
Q 042825 511 ADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVT------GRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHL 584 (631)
Q Consensus 511 ~DFGla~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~------~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l 584 (631)
+|||+++.+.... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||....... ....+
T Consensus 242 ~DfG~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~-~~~~i 317 (365)
T 2y7j_A 242 SDFGFSCHLEPGE---KLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQIL-MLRMI 317 (365)
T ss_dssp CCCTTCEECCTTC---CBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHH
T ss_pred EecCcccccCCCc---ccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHHH-HHHHH
Confidence 9999998774322 2345689999999999863 358899999999999999999999997543211 11111
Q ss_pred HHHh-----HhhhcCChhHHHHHHhhcCCChhhHHhHHHHHH
Q 042825 585 ATWF-----QKMHKNHDTFQMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 585 ~~~~-----~~~~~~~~~l~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
.... ......+..+.+++.+||..||.+|+++.++++
T Consensus 318 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~ 359 (365)
T 2y7j_A 318 MEGQYQFSSPEWDDRSSTVKDLISRLLQVDPEARLTAEQALQ 359 (365)
T ss_dssp HHTCCCCCHHHHSSSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred HhCCCCCCCcccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 1110 011123467999999999999999999999876
|
| >3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... | Back alignment and structure |
|---|
Probab=99.86 E-value=8e-22 Score=200.10 Aligned_cols=196 Identities=18% Similarity=0.291 Sum_probs=145.4
Q ss_pred CCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCH----HHHHHHHHHHHHHhc--------------------
Q 042825 418 NNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTE----QGIAQFESEITVLTK-------------------- 472 (631)
Q Consensus 418 ~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~----~~~~~~~~Ei~~l~~-------------------- 472 (631)
++|...+.||+|+||.||+|+.. +|+.||||++....... ...+.+.+|++++.+
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 84 (283)
T 3bhy_A 5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVV 84 (283)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred hhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeEE
Confidence 46889999999999999999976 58999999997654321 135778999998876
Q ss_pred --------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------C----CcEEEeeccc
Q 042825 473 --------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------D----DMRVADFGLV 516 (631)
Q Consensus 473 --------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~----~~kl~DFGla 516 (631)
++|.+++.. ...+++.....++.+++.| + .+||+|||++
T Consensus 85 lv~e~~~~~~L~~~l~~-----~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~ 159 (283)
T 3bhy_A 85 LILELVSGGELFDFLAE-----KESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIA 159 (283)
T ss_dssp EEEECCCSCBHHHHHHH-----HSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSSSSCCEEECCCTTC
T ss_pred EEEeecCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChHHEEEecCCCCCCceEEEecccc
Confidence 566666632 2358888888888888776 2 5899999999
Q ss_pred cccCCCCccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHH-----hHhh
Q 042825 517 RLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATW-----FQKM 591 (631)
Q Consensus 517 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~-----~~~~ 591 (631)
+...... ......||+.|+|||++.+..++.++||||||+++|||++|+.||....... ....+... ....
T Consensus 160 ~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~ 235 (283)
T 3bhy_A 160 HKIEAGN---EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQE-TLTNISAVNYDFDEEYF 235 (283)
T ss_dssp EECC-----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHHH-HHHHHHTTCCCCCHHHH
T ss_pred eeccCCC---cccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchHH-HHHHhHhcccCCcchhc
Confidence 8764221 2344579999999999998899999999999999999999999998643211 11111110 0011
Q ss_pred hcCChhHHHHHHhhcCCChhhHHhHHHHHHH
Q 042825 592 HKNHDTFQMAIDKTIQLDEENLANVSTVAEL 622 (631)
Q Consensus 592 ~~~~~~l~~~id~~L~~d~~~r~~~~~vl~l 622 (631)
...++.+.+++.+|+..||.+|+++.++++-
T Consensus 236 ~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 266 (283)
T 3bhy_A 236 SNTSELAKDFIRRLLVKDPKRRMTIAQSLEH 266 (283)
T ss_dssp TTCCHHHHHHHHTTSCSSGGGSCCHHHHHHC
T ss_pred ccCCHHHHHHHHHHccCCHhHCcCHHHHHhC
Confidence 2235678999999999999999999998863
|
| >3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=8.8e-22 Score=202.07 Aligned_cols=196 Identities=20% Similarity=0.336 Sum_probs=147.0
Q ss_pred cCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc-----------------------
Q 042825 417 TNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK----------------------- 472 (631)
Q Consensus 417 t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~----------------------- 472 (631)
.+.|...+.||+|+||.||+|+.. +++.||||++...... ...+.+.+|+.++.+
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 99 (303)
T 3a7i_A 21 EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAE-DEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIM 99 (303)
T ss_dssp GGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCS-TTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred HHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccH-HHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEE
Confidence 456889999999999999999865 5899999999765432 346788999998875
Q ss_pred -----CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCC
Q 042825 473 -----GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENG 523 (631)
Q Consensus 473 -----gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~ 523 (631)
++|.+++. ...+++.....++.+++.+ +.+||+|||+++.....
T Consensus 100 e~~~~~~L~~~~~------~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~- 172 (303)
T 3a7i_A 100 EYLGGGSALDLLE------PGPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDT- 172 (303)
T ss_dssp ECCTTEEHHHHHT------TSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECBTT-
T ss_pred EeCCCCcHHHHHh------cCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChheEEECCCCCEEEeecccceecCcc-
Confidence 34444442 2468899999898888765 56789999999876422
Q ss_pred ccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHhHhh--hcCChhHHHH
Q 042825 524 KHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQKM--HKNHDTFQMA 601 (631)
Q Consensus 524 ~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~~~~--~~~~~~l~~~ 601 (631)
........||..|+|||++.+..++.++|||||||++|||++|+.||....... ....+....... ...+.++.++
T Consensus 173 -~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~l 250 (303)
T 3a7i_A 173 -QIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMK-VLFLIPKNNPPTLEGNYSKPLKEF 250 (303)
T ss_dssp -BCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH-HHHHHHHSCCCCCCSSCCHHHHHH
T ss_pred -ccccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHHH-HHHHhhcCCCCCCccccCHHHHHH
Confidence 122345679999999999999999999999999999999999999997543211 111111100000 1224679999
Q ss_pred HHhhcCCChhhHHhHHHHHHH
Q 042825 602 IDKTIQLDEENLANVSTVAEL 622 (631)
Q Consensus 602 id~~L~~d~~~r~~~~~vl~l 622 (631)
+..|+..||.+|+++.++++-
T Consensus 251 i~~~l~~dp~~Rps~~~ll~~ 271 (303)
T 3a7i_A 251 VEACLNKEPSFRPTAKELLKH 271 (303)
T ss_dssp HHHHCCSSGGGSCCHHHHTTC
T ss_pred HHHHcCCChhhCcCHHHHhhC
Confidence 999999999999999998763
|
| >3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=4.2e-22 Score=218.65 Aligned_cols=197 Identities=22% Similarity=0.287 Sum_probs=145.6
Q ss_pred hcCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc----------------------
Q 042825 416 ATNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK---------------------- 472 (631)
Q Consensus 416 ~t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~---------------------- 472 (631)
..++|...+.||+|+||+||+|+.. +++.||||++............+.+|++++.+
T Consensus 20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 99 (486)
T 3mwu_A 20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIV 99 (486)
T ss_dssp HHHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEE
Confidence 3457899999999999999999976 68999999996532222345678999999876
Q ss_pred ------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC---------------------------CCcEEEeecccccc
Q 042825 473 ------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG---------------------------DDMRVADFGLVRLV 519 (631)
Q Consensus 473 ------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g---------------------------~~~kl~DFGla~~~ 519 (631)
|+|.+++.. ...+++.....|+.+++.| ..+||+|||+++..
T Consensus 100 ~e~~~~~~L~~~~~~-----~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~ 174 (486)
T 3mwu_A 100 GELYTGGELFDEIIK-----RKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCF 174 (486)
T ss_dssp ECCCCSCBHHHHHHH-----HSSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTB
T ss_pred EEcCCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCCCCCCEEEEECCcCeEC
Confidence 556555532 1357888888888887765 34899999999876
Q ss_pred CCCCccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHh-----HhhhcC
Q 042825 520 PENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWF-----QKMHKN 594 (631)
Q Consensus 520 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~-----~~~~~~ 594 (631)
... ......+||+.|+|||++.+ .|+.++||||+||++|||++|+.||.+....+ ....+.... ......
T Consensus 175 ~~~---~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~-~~~~i~~~~~~~~~~~~~~~ 249 (486)
T 3mwu_A 175 QQN---TKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYD-ILKRVETGKYAFDLPQWRTI 249 (486)
T ss_dssp CCC-------CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHTCCCSCSGGGGGS
T ss_pred CCC---CccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHhCCCCCCCcccCCC
Confidence 422 22345679999999999865 59999999999999999999999998653221 111111110 111223
Q ss_pred ChhHHHHHHhhcCCChhhHHhHHHHHHH
Q 042825 595 HDTFQMAIDKTIQLDEENLANVSTVAEL 622 (631)
Q Consensus 595 ~~~l~~~id~~L~~d~~~r~~~~~vl~l 622 (631)
++++.++|.++|..||.+|+++.++++-
T Consensus 250 s~~~~~li~~~L~~dp~~R~t~~~~l~h 277 (486)
T 3mwu_A 250 SDDAKDLIRKMLTFHPSLRITATQCLEH 277 (486)
T ss_dssp CHHHHHHHHHHTCSSTTTSCCHHHHHHC
T ss_pred CHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 5789999999999999999999998864
|
| >2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.86 E-value=7.2e-22 Score=202.71 Aligned_cols=205 Identities=13% Similarity=0.129 Sum_probs=146.4
Q ss_pred hcCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCC--HHHHHHHHHHHHHHhc--------------------
Q 042825 416 ATNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVT--EQGIAQFESEITVLTK-------------------- 472 (631)
Q Consensus 416 ~t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~--~~~~~~~~~Ei~~l~~-------------------- 472 (631)
..++|...+.||+|+||.||+|+.. +++.||||++...... ....+.+.+|++++.+
T Consensus 3 l~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 82 (305)
T 2wtk_C 3 LIGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQK 82 (305)
T ss_dssp --CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---C
T ss_pred cccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCe
Confidence 3468999999999999999999975 5899999999753211 1245778999999876
Q ss_pred ---------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeecccccc
Q 042825 473 ---------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLV 519 (631)
Q Consensus 473 ---------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~ 519 (631)
+.+.+++.. .....+++.....++.+++.| +.+||+|||+++..
T Consensus 83 ~~lv~e~~~~~l~~~~~~---~~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~ 159 (305)
T 2wtk_C 83 MYMVMEYCVCGMQEMLDS---VPEKRFPVCQAHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLLTTGGTLKISALGVAEAL 159 (305)
T ss_dssp EEEEEECCSEEHHHHHHH---STTCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEEehhccCCHHHHHHh---CcccccCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEcCCCcEEeecccccccc
Confidence 122222221 123468888888888888766 56789999999876
Q ss_pred CCCCccccccccccCcccccccccccCC--CCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHhHh-hhcCCh
Q 042825 520 PENGKHSILTKVAGTFGYLAPEYIVTGR--ITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQK-MHKNHD 596 (631)
Q Consensus 520 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~--~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~~~-~~~~~~ 596 (631)
.............||..|+|||++.+.. ++.++|||||||++|||++|+.||....... ....+...... ....++
T Consensus 160 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-~~~~i~~~~~~~~~~~~~ 238 (305)
T 2wtk_C 160 HPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYK-LFENIGKGSYAIPGDCGP 238 (305)
T ss_dssp CTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHCCCCCCSSSCH
T ss_pred CccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchHHH-HHHHHhcCCCCCCCccCH
Confidence 4322223334567999999999987644 4789999999999999999999998643211 11111111101 112246
Q ss_pred hHHHHHHhhcCCChhhHHhHHHHHHHHH
Q 042825 597 TFQMAIDKTIQLDEENLANVSTVAELGD 624 (631)
Q Consensus 597 ~l~~~id~~L~~d~~~r~~~~~vl~lal 624 (631)
++.+++.+|+..||.+|+++.++++--.
T Consensus 239 ~l~~li~~~l~~dp~~Rps~~~ll~~~~ 266 (305)
T 2wtk_C 239 PLSDLLKGMLEYEPAKRFSIRQIRQHSW 266 (305)
T ss_dssp HHHHHHHHHTCSSTTTSCCHHHHHHSHH
T ss_pred HHHHHHHHHccCChhhCCCHHHHhcCcc
Confidence 7999999999999999999999886433
|
| >3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.86 E-value=1.2e-21 Score=203.59 Aligned_cols=201 Identities=21% Similarity=0.252 Sum_probs=128.9
Q ss_pred cCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc-----------------------
Q 042825 417 TNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK----------------------- 472 (631)
Q Consensus 417 t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~----------------------- 472 (631)
..+|...+.||+|+||.||+|+.. +++.||||++... .....+.+.+|+.++.+
T Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~ 104 (337)
T 3ll6_A 27 ELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSN--EEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDT 104 (337)
T ss_dssp TEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEES--SHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTT
T ss_pred CceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCC--chHHHHHHHHHHHHHHHhccCCChhhcccccccccccccc
Confidence 457889999999999999999965 6899999998654 23455678888887754
Q ss_pred -------------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC--------------------------CCcEEEee
Q 042825 473 -------------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG--------------------------DDMRVADF 513 (631)
Q Consensus 473 -------------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g--------------------------~~~kl~DF 513 (631)
|+|.+++... .....+++.....|+.+++.| +.+||+||
T Consensus 105 ~~~~~~lv~e~~~g~L~~~l~~~--~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~ivH~Dikp~NIl~~~~~~~kl~Df 182 (337)
T 3ll6_A 105 GQAEFLLLTELCKGQLVEFLKKM--ESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDF 182 (337)
T ss_dssp SSEEEEEEEECCSEEHHHHHHHH--HTTCSCCHHHHHHHHHHHHHHHHHHHTSSSCCBCCCCCGGGCEECTTSCEEBCCC
T ss_pred CCceEEEEEEecCCCHHHHHHHh--hccCCCCHHHHHHHHHHHHHHHHHHHhCCCCEEEccCCcccEEECCCCCEEEecC
Confidence 3444444322 123458998888888877764 45789999
Q ss_pred ccccccCCCCcc----------ccccccccCccccccccc---ccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHH
Q 042825 514 GLVRLVPENGKH----------SILTKVAGTFGYLAPEYI---VTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEY 580 (631)
Q Consensus 514 Gla~~~~~~~~~----------~~~~~~~gt~~Y~aPE~~---~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~ 580 (631)
|+++........ .......||+.|+|||++ .+..++.++|||||||++|||+||+.||......
T Consensus 183 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~--- 259 (337)
T 3ll6_A 183 GSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKL--- 259 (337)
T ss_dssp TTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC---------
T ss_pred ccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHH---
Confidence 999876432111 011245699999999998 5667899999999999999999999999753221
Q ss_pred HHHHHHHhH--hhhcCChhHHHHHHhhcCCChhhHHhHHHHHHHHHh
Q 042825 581 IIHLATWFQ--KMHKNHDTFQMAIDKTIQLDEENLANVSTVAELGDH 625 (631)
Q Consensus 581 ~~~l~~~~~--~~~~~~~~l~~~id~~L~~d~~~r~~~~~vl~lal~ 625 (631)
..+..... ........+.+++.+|+..||.+|+++.++++....
T Consensus 260 -~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~ 305 (337)
T 3ll6_A 260 -RIVNGKYSIPPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQE 305 (337)
T ss_dssp -------CCCCTTCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHH
T ss_pred -HhhcCcccCCcccccchHHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence 11111111 111223578999999999999999999998875443
|
| >4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=5.6e-22 Score=201.88 Aligned_cols=196 Identities=17% Similarity=0.255 Sum_probs=143.2
Q ss_pred cCCcccceeecCCCceEEEEEEecC-C-------cEEEEEEEecCCCCHHHHHHHHHHHHHHhc----------------
Q 042825 417 TNNFSEENRLGRGGVGTVYKGELKD-G-------TEVGVKRMELGSVTEQGIAQFESEITVLTK---------------- 472 (631)
Q Consensus 417 t~~f~~~~~iG~G~fg~Vyk~~~~~-g-------~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~---------------- 472 (631)
.++|...+.||+|+||+||+|+... + ..||+|++.... ....+++.+|++++.+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 84 (289)
T 4fvq_A 7 NEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAH--RNYSESFFEAASMMSKLSHKHLVLNYGVCVCG 84 (289)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGG--GGGHHHHHHHHHHHHTSCCTTBCCEEEEECCT
T ss_pred hhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhccccc--HHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeC
Confidence 3578889999999999999998653 3 579999986542 3355789999999876
Q ss_pred ------------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CC--------c
Q 042825 473 ------------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DD--------M 508 (631)
Q Consensus 473 ------------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~--------~ 508 (631)
|+|.+++.. ....+++..+..++.+++.| +. +
T Consensus 85 ~~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~ 160 (289)
T 4fvq_A 85 DENILVQEFVKFGSLDTYLKK----NKNCINILWKLEVAKQLAAAMHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFI 160 (289)
T ss_dssp TCCEEEEECCTTCBHHHHHHH----TGGGCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEEECCBGGGTBCCEE
T ss_pred CCCEEEEECCCCCCHHHHHHh----CCCCCCHHHHHHHHHHHHHHHHHHhhCCeECCCcCcceEEEecCCccccccccee
Confidence 577776643 22348888888888888876 22 8
Q ss_pred EEEeeccccccCCCCccccccccccCccccccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHH
Q 042825 509 RVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVT-GRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATW 587 (631)
Q Consensus 509 kl~DFGla~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~ 587 (631)
||+|||+++.... .....||+.|+|||++.+ ..++.++|||||||++|||++|..|+....... ........
T Consensus 161 kl~Dfg~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~-~~~~~~~~ 233 (289)
T 4fvq_A 161 KLSDPGISITVLP------KDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQ-RKLQFYED 233 (289)
T ss_dssp EECCCCSCTTTSC------HHHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHH-HHHHHHHT
T ss_pred eeccCcccccccC------ccccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchH-HHHHHhhc
Confidence 9999999976531 123458899999999987 679999999999999999999655554332221 11111111
Q ss_pred h-HhhhcCChhHHHHHHhhcCCChhhHHhHHHHHHHHHh
Q 042825 588 F-QKMHKNHDTFQMAIDKTIQLDEENLANVSTVAELGDH 625 (631)
Q Consensus 588 ~-~~~~~~~~~l~~~id~~L~~d~~~r~~~~~vl~lal~ 625 (631)
. ......+.++.+++.+|+..||.+|+++.++++..-.
T Consensus 234 ~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~ 272 (289)
T 4fvq_A 234 RHQLPAPKAAELANLINNCMDYEPDHRPSFRAIIRDLNS 272 (289)
T ss_dssp TCCCCCCSSCTTHHHHHHHSCSSGGGSCCHHHHHHHHHT
T ss_pred cCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHH
Confidence 1 1111234678999999999999999999998876443
|
| >2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=6.2e-22 Score=205.65 Aligned_cols=206 Identities=22% Similarity=0.317 Sum_probs=148.9
Q ss_pred cCCcccceeecCCCceEEEEEEec------CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc------------------
Q 042825 417 TNNFSEENRLGRGGVGTVYKGELK------DGTEVGVKRMELGSVTEQGIAQFESEITVLTK------------------ 472 (631)
Q Consensus 417 t~~f~~~~~iG~G~fg~Vyk~~~~------~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~------------------ 472 (631)
.++|...+.||+|+||.||+|++. +++.||||++.... ......++.+|+.++.+
T Consensus 29 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 107 (327)
T 2yfx_A 29 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVC-SEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLP 107 (327)
T ss_dssp GGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSC-CHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred hhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEecccc-chhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCC
Confidence 467899999999999999999842 47789999996443 44566789999998875
Q ss_pred ----------CChhHHhHhhhh--cCCCCCCHHHHHHHHHHhhcC---------------------------CCcEEEee
Q 042825 473 ----------GTLGRHLFNWEE--EGLEPLEWNTRLNIALDVARG---------------------------DDMRVADF 513 (631)
Q Consensus 473 ----------gsL~~~L~~~~~--~~~~~L~~~~~~~I~~~ia~g---------------------------~~~kl~DF 513 (631)
|+|.+++..... .....+++.....++.+++.| ..+||+||
T Consensus 108 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~i~H~dlkp~NIli~~~~~~~~~kl~Df 187 (327)
T 2yfx_A 108 RFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDF 187 (327)
T ss_dssp CEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECCC
T ss_pred cEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeecCcCCHhHEEEecCCCcceEEECcc
Confidence 567666654211 112458898899898888765 23789999
Q ss_pred ccccccCCCCccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChHHHHHHHHHhHh--
Q 042825 514 GLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT-GRKVVDATHSDPEYIIHLATWFQK-- 590 (631)
Q Consensus 514 Gla~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~Ellt-G~~P~~~~~~~~~~~~~l~~~~~~-- 590 (631)
|+++...............||+.|+|||++.+..++.++|||||||++|||+| |+.||...... .+..+...
T Consensus 188 g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~-----~~~~~~~~~~ 262 (327)
T 2yfx_A 188 GMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ-----EVLEFVTSGG 262 (327)
T ss_dssp HHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH-----HHHHHHHTTC
T ss_pred ccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHH-----HHHHHHhcCC
Confidence 99986542222222334568999999999998899999999999999999999 99999754321 11222211
Q ss_pred ----hhcCChhHHHHHHhhcCCChhhHHhHHHHHHHHHhhhc
Q 042825 591 ----MHKNHDTFQMAIDKTIQLDEENLANVSTVAELGDHCCA 628 (631)
Q Consensus 591 ----~~~~~~~l~~~id~~L~~d~~~r~~~~~vl~lal~C~~ 628 (631)
....+..+.+++..|+..||.+|+++.++++.-..|.+
T Consensus 263 ~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~~ 304 (327)
T 2yfx_A 263 RMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQ 304 (327)
T ss_dssp CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHhc
Confidence 11224679999999999999999999999987666543
|
| >2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=2e-21 Score=203.81 Aligned_cols=199 Identities=22% Similarity=0.306 Sum_probs=143.6
Q ss_pred hcCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc----------------------
Q 042825 416 ATNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK---------------------- 472 (631)
Q Consensus 416 ~t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~---------------------- 472 (631)
..++|...+.||+|+||.||+|+.. +|+.||||++.... ......++.+|++++.+
T Consensus 9 i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 87 (353)
T 2b9h_A 9 ISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFD-KPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFN 87 (353)
T ss_dssp SCTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCS-SHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCC
T ss_pred cccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccc-cchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccc
Confidence 4578999999999999999999976 58999999996532 34456778899998876
Q ss_pred ----------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccc
Q 042825 473 ----------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRL 518 (631)
Q Consensus 473 ----------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~ 518 (631)
|+|.+++. . ..+++.....++.+++.| +.+||+|||+++.
T Consensus 88 ~~~lv~e~~~~~L~~~~~----~--~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~ 161 (353)
T 2b9h_A 88 EVYIIQELMQTDLHRVIS----T--QMLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARI 161 (353)
T ss_dssp CEEEEECCCSEEHHHHHH----H--CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred eEEEEEeccCccHHHHHh----h--cCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEcCCCcEEEEecccccc
Confidence 22222221 1 357888888888888776 4689999999987
Q ss_pred cCCCCcc--------ccccccccCccccccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHH----
Q 042825 519 VPENGKH--------SILTKVAGTFGYLAPEYIVT-GRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLA---- 585 (631)
Q Consensus 519 ~~~~~~~--------~~~~~~~gt~~Y~aPE~~~~-~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~---- 585 (631)
....... .......||+.|+|||++.. ..++.++|||||||++|||++|+.||.+..... ....+.
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-~~~~~~~~~~ 240 (353)
T 2b9h_A 162 IDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRH-QLLLIFGIIG 240 (353)
T ss_dssp CC----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHC
T ss_pred cccccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHH-HHHHHHHHhC
Confidence 6422111 11234578999999998765 679999999999999999999999998653211 111111
Q ss_pred -----------------HHhHh------------hhcCChhHHHHHHhhcCCChhhHHhHHHHHHH
Q 042825 586 -----------------TWFQK------------MHKNHDTFQMAIDKTIQLDEENLANVSTVAEL 622 (631)
Q Consensus 586 -----------------~~~~~------------~~~~~~~l~~~id~~L~~d~~~r~~~~~vl~l 622 (631)
.+... ....++++.+++.+||..||.+|+++.++++-
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 306 (353)
T 2b9h_A 241 TPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEH 306 (353)
T ss_dssp CCCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred CCchhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 11110 01235678999999999999999999998763
|
| >2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.86 E-value=7.6e-22 Score=222.30 Aligned_cols=203 Identities=17% Similarity=0.298 Sum_probs=145.4
Q ss_pred CCcccce-eecCCCceEEEEEEec---CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc---------------------
Q 042825 418 NNFSEEN-RLGRGGVGTVYKGELK---DGTEVGVKRMELGSVTEQGIAQFESEITVLTK--------------------- 472 (631)
Q Consensus 418 ~~f~~~~-~iG~G~fg~Vyk~~~~---~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~--------------------- 472 (631)
+++...+ .||+|+||.||+|.++ ++..||||+++... .....++|.+|+++|.+
T Consensus 335 ~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~-~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~~~~~lv 413 (613)
T 2ozo_A 335 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGT-EKADTEEMMREAQIMHQLDNPYIVRLIGVCQAEALMLV 413 (613)
T ss_dssp TSEEEEEEEEEECSSSEEEEEEEECSSCEEEEEEEECCCCC-SSTTHHHHHHHHHHHTTCCCTTBCCEEEEEESSSEEEE
T ss_pred cceeEcCcEEecCCCcEEEEEEEecCCCcEEEEEEEcCCCC-ChHHHHHHHHHHHHHHhCCCCCEeeEEEEeccCCeEEE
Confidence 3444444 7999999999999864 46689999997653 23356789999999986
Q ss_pred ------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCC
Q 042825 473 ------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPEN 522 (631)
Q Consensus 473 ------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~ 522 (631)
|+|.+++. .....+++.....|+.+++.| +.+||+|||+++.+...
T Consensus 414 ~E~~~~g~L~~~l~----~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~ 489 (613)
T 2ozo_A 414 MEMAGGGPLHKFLV----GKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRNLAARNVLLVNRHYAKISDFGLSKALGAD 489 (613)
T ss_dssp EECCTTCBHHHHHT----TCTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCCSTTTTCC--
T ss_pred EEeCCCCcHHHHHh----hccCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCcCCHHHEEEcCCCcEEEeeccCcccccCC
Confidence 56666663 234568999999999998877 45789999999876422
Q ss_pred Ccc-ccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChHHHHHHHHHhH--hhhcCChhH
Q 042825 523 GKH-SILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT-GRKVVDATHSDPEYIIHLATWFQ--KMHKNHDTF 598 (631)
Q Consensus 523 ~~~-~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~Ellt-G~~P~~~~~~~~~~~~~l~~~~~--~~~~~~~~l 598 (631)
... .......+|+.|+|||++.+..++.++|||||||++|||+| |+.||.+....+ ....+....+ .....++++
T Consensus 490 ~~~~~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~-~~~~i~~~~~~~~p~~~~~~l 568 (613)
T 2ozo_A 490 DSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPE-VMAFIEQGKRMECPPECPPEL 568 (613)
T ss_dssp ------------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSHH-HHHHHHTTCCCCCCTTCCHHH
T ss_pred CceeeeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHHH-HHHHHHcCCCCCCCCcCCHHH
Confidence 211 11223456789999999998999999999999999999998 999998764432 1111111111 011234789
Q ss_pred HHHHHhhcCCChhhHHhHHHHHHHHHhh
Q 042825 599 QMAIDKTIQLDEENLANVSTVAELGDHC 626 (631)
Q Consensus 599 ~~~id~~L~~d~~~r~~~~~vl~lal~C 626 (631)
.+++..|+..+|.+||++.++++..-.+
T Consensus 569 ~~li~~cl~~dP~~RPs~~~l~~~L~~~ 596 (613)
T 2ozo_A 569 YALMSDCWIYKWEDRPDFLTVEQRMRAC 596 (613)
T ss_dssp HHHHHHTTCSSTTTSCCHHHHHHHHHHH
T ss_pred HHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence 9999999999999999999988765444
|
| >2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... | Back alignment and structure |
|---|
Probab=99.86 E-value=4.5e-22 Score=202.28 Aligned_cols=196 Identities=20% Similarity=0.265 Sum_probs=144.9
Q ss_pred cCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCH-HHHHHHHHHHHHHhc----------------------
Q 042825 417 TNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTE-QGIAQFESEITVLTK---------------------- 472 (631)
Q Consensus 417 t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~-~~~~~~~~Ei~~l~~---------------------- 472 (631)
.++|...+.||+|+||.||+|+.. +++.||||++....... ...+.+.+|++++.+
T Consensus 13 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 92 (284)
T 2vgo_A 13 IDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLM 92 (284)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEE
Confidence 357899999999999999999976 58899999996532111 124578899998876
Q ss_pred ------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCC
Q 042825 473 ------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPEN 522 (631)
Q Consensus 473 ------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~ 522 (631)
|+|.+++.. ...+++.....++.+++.| +.+||+|||+++.....
T Consensus 93 ~e~~~~~~L~~~l~~-----~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~ 167 (284)
T 2vgo_A 93 LEFAPRGELYKELQK-----HGRFDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSL 167 (284)
T ss_dssp ECCCTTEEHHHHHHH-----HSSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECTTCCEEECCCTTCEECSSS
T ss_pred EEeCCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEEcCCCCEEEecccccccCccc
Confidence 355555532 1357888888888887765 56899999999765321
Q ss_pred CccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHh-HhhhcCChhHHHH
Q 042825 523 GKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWF-QKMHKNHDTFQMA 601 (631)
Q Consensus 523 ~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~-~~~~~~~~~l~~~ 601 (631)
......|++.|+|||++.+..++.++||||||+++|||++|+.||....... ....+.... ......++++.++
T Consensus 168 ----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l 242 (284)
T 2vgo_A 168 ----RRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTE-THRRIVNVDLKFPPFLSDGSKDL 242 (284)
T ss_dssp ----CBCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHH-HHHHHHTTCCCCCTTSCHHHHHH
T ss_pred ----ccccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHhH-HHHHHhccccCCCCcCCHHHHHH
Confidence 1234679999999999999899999999999999999999999998643211 111111100 0011235688999
Q ss_pred HHhhcCCChhhHHhHHHHHHH
Q 042825 602 IDKTIQLDEENLANVSTVAEL 622 (631)
Q Consensus 602 id~~L~~d~~~r~~~~~vl~l 622 (631)
+.+++..||.+|+++.++++-
T Consensus 243 i~~~l~~~p~~Rps~~~ll~h 263 (284)
T 2vgo_A 243 ISKLLRYHPPQRLPLKGVMEH 263 (284)
T ss_dssp HHHHSCSSGGGSCCHHHHHTC
T ss_pred HHHHhhcCHhhCCCHHHHhhC
Confidence 999999999999999998763
|
| >3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=99.86 E-value=1e-22 Score=218.69 Aligned_cols=196 Identities=13% Similarity=0.092 Sum_probs=136.9
Q ss_pred hcCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCC-CHHHHHHHHHHHHHHhcC--------------------
Q 042825 416 ATNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSV-TEQGIAQFESEITVLTKG-------------------- 473 (631)
Q Consensus 416 ~t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~-~~~~~~~~~~Ei~~l~~g-------------------- 473 (631)
.+..|...++||+|+||+||+|+.. +|+.||||++..... .....+.|.+|+.++..-
T Consensus 76 ~~~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~ 155 (413)
T 3dzo_A 76 RPRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFD 155 (413)
T ss_dssp CCEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCE
T ss_pred CceeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchh
Confidence 3456778899999999999999955 699999999874322 222356678887766541
Q ss_pred ----------------------------------ChhHHhHhhh--hcCCCCCCHHHHHHHHHHhhcC------------
Q 042825 474 ----------------------------------TLGRHLFNWE--EEGLEPLEWNTRLNIALDVARG------------ 505 (631)
Q Consensus 474 ----------------------------------sL~~~L~~~~--~~~~~~L~~~~~~~I~~~ia~g------------ 505 (631)
+|.+++.... ......++|..++.|+.++++|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~iiHr 235 (413)
T 3dzo_A 156 LVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHT 235 (413)
T ss_dssp EEECCC---------------CCSEEEEEECCSEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEECS
T ss_pred hcccCCCCccccccCCCccccccceEEEeehhcCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhCCcccC
Confidence 1222221100 1112346677888888888876
Q ss_pred ------------CCcEEEeeccccccCCCCccccccccccCccccccccc----------ccCCCCchhhHHHHHHHHHH
Q 042825 506 ------------DDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYI----------VTGRITAKVDVYSFGMILMD 563 (631)
Q Consensus 506 ------------~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~Y~aPE~~----------~~~~~~~k~DVwS~GvvL~E 563 (631)
+.+||+|||+++.... .....+| +.|+|||++ ....++.++|||||||++||
T Consensus 236 DiKp~NILl~~~~~~kL~DFG~a~~~~~-----~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~e 309 (413)
T 3dzo_A 236 YLRPVDIVLDQRGGVFLTGFEHLVRDGA-----SAVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYW 309 (413)
T ss_dssp CCCGGGEEECTTCCEEECCGGGCEETTE-----EECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHH
T ss_pred CcccceEEEecCCeEEEEeccceeecCC-----ccccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHHH
Confidence 5689999999987531 1345678 999999999 55568999999999999999
Q ss_pred HHcCCCCCCCCCCChHHHHHHHHHhHhhhcCChhHHHHHHhhcCCChhhHHhHHHHHH
Q 042825 564 LITGRKVVDATHSDPEYIIHLATWFQKMHKNHDTFQMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 564 lltG~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
|+||+.||........ ...........++++.+++.+||..||.+|+++.++++
T Consensus 310 lltg~~Pf~~~~~~~~----~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~~l~ 363 (413)
T 3dzo_A 310 IWCADLPNTDDAALGG----SEWIFRSCKNIPQPVRALLEGFLRYPKEDRLLPLQAME 363 (413)
T ss_dssp HHHSSCCCCTTGGGSC----SGGGGSSCCCCCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred HHHCCCCCCCcchhhh----HHHHHhhcccCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 9999999975432110 00001111234578999999999999999999877653
|
| >1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=5e-22 Score=202.76 Aligned_cols=199 Identities=21% Similarity=0.265 Sum_probs=144.7
Q ss_pred cCCcccce-eecCCCceEEEEEEec---CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc--------------------
Q 042825 417 TNNFSEEN-RLGRGGVGTVYKGELK---DGTEVGVKRMELGSVTEQGIAQFESEITVLTK-------------------- 472 (631)
Q Consensus 417 t~~f~~~~-~iG~G~fg~Vyk~~~~---~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~-------------------- 472 (631)
.++|...+ .||+|+||+||+|... +++.||||++..........+++.+|++++.+
T Consensus 15 ~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~l 94 (291)
T 1xbb_A 15 RKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAESWML 94 (291)
T ss_dssp GGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEESSSEEE
T ss_pred chhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEECCCCcEE
Confidence 45677777 9999999999999643 47899999997654444456789999999876
Q ss_pred -------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCC
Q 042825 473 -------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPE 521 (631)
Q Consensus 473 -------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~ 521 (631)
++|.+++.. ...+++.....++.+++.| +.+||+|||+++....
T Consensus 95 v~e~~~~~~L~~~l~~-----~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~ 169 (291)
T 1xbb_A 95 VMEMAELGPLNKYLQQ-----NRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRA 169 (291)
T ss_dssp EEECCTTEEHHHHHHH-----CTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCTTCEECCT
T ss_pred EEEeCCCCCHHHHHHh-----CcCCCHHHHHHHHHHHHHHHHHHHhCCeEcCCCCcceEEEeCCCcEEEccCCcceeecc
Confidence 455555532 2358888888898888876 4578999999987643
Q ss_pred CCcc-ccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChHHHHHHHHHhHhh------hc
Q 042825 522 NGKH-SILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT-GRKVVDATHSDPEYIIHLATWFQKM------HK 593 (631)
Q Consensus 522 ~~~~-~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~Ellt-G~~P~~~~~~~~~~~~~l~~~~~~~------~~ 593 (631)
.... .......+|+.|+|||.+.+..++.++||||||+++|||+| |+.||...... . +...+... ..
T Consensus 170 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~--~---~~~~~~~~~~~~~~~~ 244 (291)
T 1xbb_A 170 DENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS--E---VTAMLEKGERMGCPAG 244 (291)
T ss_dssp TCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHH--H---HHHHHHTTCCCCCCTT
T ss_pred CCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHH--H---HHHHHHcCCCCCCCCC
Confidence 3221 12233457789999999988889999999999999999999 99999864322 1 11211111 12
Q ss_pred CChhHHHHHHhhcCCChhhHHhHHHHHHHHHh
Q 042825 594 NHDTFQMAIDKTIQLDEENLANVSTVAELGDH 625 (631)
Q Consensus 594 ~~~~l~~~id~~L~~d~~~r~~~~~vl~lal~ 625 (631)
.++++.+++..|+..||.+||++.++++....
T Consensus 245 ~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~ 276 (291)
T 1xbb_A 245 CPREMYDLMNLCWTYDVENRPGFAAVELRLRN 276 (291)
T ss_dssp CCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHH
T ss_pred CCHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence 34689999999999999999999998875443
|
| >3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.86 E-value=1.5e-21 Score=209.07 Aligned_cols=200 Identities=22% Similarity=0.330 Sum_probs=126.5
Q ss_pred Cccc-ceeecCCCceEEEEEEec---CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc----------------------
Q 042825 419 NFSE-ENRLGRGGVGTVYKGELK---DGTEVGVKRMELGSVTEQGIAQFESEITVLTK---------------------- 472 (631)
Q Consensus 419 ~f~~-~~~iG~G~fg~Vyk~~~~---~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~---------------------- 472 (631)
.|+. .++||+|+||+||+|+.+ +++.||||++...... ..+.+|++++.+
T Consensus 21 ~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~~----~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~ 96 (405)
T 3rgf_A 21 LFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGIS----MSACREIALLRELKHPNVISLQKVFLSHADRKVW 96 (405)
T ss_dssp HEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSSCC----HHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEE
T ss_pred hhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCCC----HHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEE
Confidence 3544 458999999999999976 4789999999765432 467889988876
Q ss_pred -------CChhHHhHhhhhc----CCCCCCHHHHHHHHHHhhcC----------------------------CCcEEEee
Q 042825 473 -------GTLGRHLFNWEEE----GLEPLEWNTRLNIALDVARG----------------------------DDMRVADF 513 (631)
Q Consensus 473 -------gsL~~~L~~~~~~----~~~~L~~~~~~~I~~~ia~g----------------------------~~~kl~DF 513 (631)
|++.+++...... ....+++.....|+.+++.| +.+||+||
T Consensus 97 lv~e~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Df 176 (405)
T 3rgf_A 97 LLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADM 176 (405)
T ss_dssp EEEECCSEEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECCSSTTTTCEEECCT
T ss_pred EEEeCCCCCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCEeCCCcCHHHeEEecCCCCCCcEEEEEC
Confidence 3333333221111 11248888888888887765 35789999
Q ss_pred ccccccCCCCc-cccccccccCcccccccccccC-CCCchhhHHHHHHHHHHHHcCCCCCCCCCCCh--------HHHHH
Q 042825 514 GLVRLVPENGK-HSILTKVAGTFGYLAPEYIVTG-RITAKVDVYSFGMILMDLITGRKVVDATHSDP--------EYIIH 583 (631)
Q Consensus 514 Gla~~~~~~~~-~~~~~~~~gt~~Y~aPE~~~~~-~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~--------~~~~~ 583 (631)
|+|+....... .......+||+.|+|||++.+. .++.++|||||||++|||++|+.||....... .....
T Consensus 177 g~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~l~~ 256 (405)
T 3rgf_A 177 GFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDR 256 (405)
T ss_dssp TCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCCCHHHHHH
T ss_pred CCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccccccccccchHHHHHH
Confidence 99987642211 1223456899999999998874 58999999999999999999999997543320 11111
Q ss_pred HHH---------H-----------------------------hHhh-hcCChhHHHHHHhhcCCChhhHHhHHHHHHH
Q 042825 584 LAT---------W-----------------------------FQKM-HKNHDTFQMAIDKTIQLDEENLANVSTVAEL 622 (631)
Q Consensus 584 l~~---------~-----------------------------~~~~-~~~~~~l~~~id~~L~~d~~~r~~~~~vl~l 622 (631)
+.. | .... ...+.++.++|.+||..||.+|+++.++++-
T Consensus 257 i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e~L~h 334 (405)
T 3rgf_A 257 IFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQD 334 (405)
T ss_dssp HHHHHCCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred HHHhhCCCChhhcchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 111 0 0000 0114578899999999999999999998764
|
| >1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=2e-21 Score=202.06 Aligned_cols=194 Identities=22% Similarity=0.308 Sum_probs=142.8
Q ss_pred hcCCcccceeecCCCceEEEEEEe-c-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc---------------------
Q 042825 416 ATNNFSEENRLGRGGVGTVYKGEL-K-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK--------------------- 472 (631)
Q Consensus 416 ~t~~f~~~~~iG~G~fg~Vyk~~~-~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~--------------------- 472 (631)
..++|+..+.||+|+||+||+|+. . +++.||||++... ....+.+.+|++++.+
T Consensus 12 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~ 88 (339)
T 1z57_A 12 LSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV---DRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEH 88 (339)
T ss_dssp ETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSS---HHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEE
T ss_pred ccCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecC---CchhHHHHHHHHHHHHhhhcCCCCceeeEeeeccccc
Confidence 346899999999999999999986 3 5889999999643 3455678888877754
Q ss_pred ------------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC----------------------C------------
Q 042825 473 ------------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG----------------------D------------ 506 (631)
Q Consensus 473 ------------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g----------------------~------------ 506 (631)
+++.+++.. .....+++.....++.+++.| .
T Consensus 89 ~~~~~lv~e~~~~~l~~~l~~---~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~~~~~ 165 (339)
T 1z57_A 89 HGHICIVFELLGLSTYDFIKE---NGFLPFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIK 165 (339)
T ss_dssp TTEEEEEEECCCCBHHHHHHH---TTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCCCEEEEEC----
T ss_pred CCcEEEEEcCCCCCHHHHHHh---cCCCCCcHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHEEEeccccccccCCccc
Confidence 455555532 233468888888888888776 1
Q ss_pred ---------CcEEEeeccccccCCCCccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCC
Q 042825 507 ---------DMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSD 577 (631)
Q Consensus 507 ---------~~kl~DFGla~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~ 577 (631)
.+||+|||+++..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||......
T Consensus 166 ~~~~~~~~~~~kl~Dfg~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~ 240 (339)
T 1z57_A 166 RDERTLINPDIKVVDFGSATYDDEH-----HSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSK 240 (339)
T ss_dssp CEEEEESCCCEEECCCSSCEETTSC-----CCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHH
T ss_pred cccccccCCCceEeeCcccccCccc-----cccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChH
Confidence 3789999999875321 23467999999999999989999999999999999999999999864322
Q ss_pred hHHHHHHHHHhHh----------------------------------h-------h----cCChhHHHHHHhhcCCChhh
Q 042825 578 PEYIIHLATWFQK----------------------------------M-------H----KNHDTFQMAIDKTIQLDEEN 612 (631)
Q Consensus 578 ~~~~~~l~~~~~~----------------------------------~-------~----~~~~~l~~~id~~L~~d~~~ 612 (631)
+ ....+...... . . ..++++.+++.+||..||.+
T Consensus 241 ~-~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~ 319 (339)
T 1z57_A 241 E-HLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAK 319 (339)
T ss_dssp H-HHHHHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTT
T ss_pred H-HHHHHHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCccc
Confidence 1 11111110000 0 0 00245789999999999999
Q ss_pred HHhHHHHHH
Q 042825 613 LANVSTVAE 621 (631)
Q Consensus 613 r~~~~~vl~ 621 (631)
|+++.++++
T Consensus 320 Rpt~~ell~ 328 (339)
T 1z57_A 320 RITLREALK 328 (339)
T ss_dssp SCCHHHHTT
T ss_pred ccCHHHHhc
Confidence 999998765
|
| >1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=2.1e-21 Score=206.77 Aligned_cols=194 Identities=19% Similarity=0.233 Sum_probs=141.0
Q ss_pred cCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc-----------------------
Q 042825 417 TNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK----------------------- 472 (631)
Q Consensus 417 t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~----------------------- 472 (631)
.++|...+.||+|+||+||+|+.. +++.||||++... ....+.+.+|++++.+
T Consensus 36 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~ 112 (397)
T 1wak_A 36 NGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA---EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKI 112 (397)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC---HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEE
T ss_pred CCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC---CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceee
Confidence 468999999999999999999865 5899999999743 3455678888887754
Q ss_pred ----------------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC-------------------------C-----
Q 042825 473 ----------------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG-------------------------D----- 506 (631)
Q Consensus 473 ----------------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g-------------------------~----- 506 (631)
+++.+++. ......+++.....|+.+++.| +
T Consensus 113 ~~~~~~~~~lv~e~~~~~l~~~~~---~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~givHrDikp~NIll~~~~~~~~~ 189 (397)
T 1wak_A 113 SGVNGTHICMVFEVLGHHLLKWII---KSNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRR 189 (397)
T ss_dssp EETTEEEEEEEECCCCCBHHHHHH---HTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECCCCSGGGEEECCCHHHHHH
T ss_pred cCCCCceEEEEEeccCccHHHHHH---hcccCCCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHeeEeccchhhhh
Confidence 22222221 1223468888888888777654 1
Q ss_pred --------------------------------------------CcEEEeeccccccCCCCccccccccccCcccccccc
Q 042825 507 --------------------------------------------DMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEY 542 (631)
Q Consensus 507 --------------------------------------------~~kl~DFGla~~~~~~~~~~~~~~~~gt~~Y~aPE~ 542 (631)
.+||+|||+++..... .....||+.|+|||+
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~-----~~~~~gt~~y~aPE~ 264 (397)
T 1wak_A 190 LAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH-----FTEDIQTRQYRSLEV 264 (397)
T ss_dssp HHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC-----SCSCCSCGGGCCHHH
T ss_pred hhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc-----CccCCCCCcccCChh
Confidence 5899999999876421 344579999999999
Q ss_pred cccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCh----H-HHHHHHHHhHhh--------------------------
Q 042825 543 IVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDP----E-YIIHLATWFQKM-------------------------- 591 (631)
Q Consensus 543 ~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~----~-~~~~l~~~~~~~-------------------------- 591 (631)
+.+..++.++|||||||++|||+||+.||....... . ....+.......
T Consensus 265 ~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (397)
T 1wak_A 265 LIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITK 344 (397)
T ss_dssp HHTSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCC
T ss_pred hcCCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCccccccccc
Confidence 999999999999999999999999999997644321 1 111111110000
Q ss_pred -----------------hcCChhHHHHHHhhcCCChhhHHhHHHHHH
Q 042825 592 -----------------HKNHDTFQMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 592 -----------------~~~~~~l~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
......+.+++.+||..||.+|+++.++++
T Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 391 (397)
T 1wak_A 345 LKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLR 391 (397)
T ss_dssp CCCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHT
T ss_pred cCCcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhh
Confidence 000135789999999999999999998875
|
| >2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.86 E-value=2.2e-21 Score=199.92 Aligned_cols=201 Identities=19% Similarity=0.269 Sum_probs=139.2
Q ss_pred hcCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCC-CHHHHHHHHHHHHHHhc---------------------
Q 042825 416 ATNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSV-TEQGIAQFESEITVLTK--------------------- 472 (631)
Q Consensus 416 ~t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~-~~~~~~~~~~Ei~~l~~--------------------- 472 (631)
..++|...+.||+|+||.||+|+.. +++.||||++..... .....+.+.+|+.++.+
T Consensus 32 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~l 111 (309)
T 2h34_A 32 QFGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYV 111 (309)
T ss_dssp --CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEE
T ss_pred EeccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEE
Confidence 3578999999999999999999976 689999999875432 23345778999999876
Q ss_pred -------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCC
Q 042825 473 -------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPE 521 (631)
Q Consensus 473 -------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~ 521 (631)
++|.+++.. ...+++.....++.+++.+ +.+||+|||+++....
T Consensus 112 v~e~~~~~~L~~~l~~-----~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~ 186 (309)
T 2h34_A 112 DMRLINGVDLAAMLRR-----QGPLAPPRAVAIVRQIGSALDAAHAAGATHRDVKPENILVSADDFAYLVDFGIASATTD 186 (309)
T ss_dssp EEECCCCEEHHHHHHH-----HCSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECSCCC------
T ss_pred EEEecCCCCHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCcCCcCCCChHHEEEcCCCCEEEecCccCccccc
Confidence 356665542 1358888888888888765 5678999999987642
Q ss_pred CCccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHhHh--------hhc
Q 042825 522 NGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQK--------MHK 593 (631)
Q Consensus 522 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~~~--------~~~ 593 (631)
. .........||+.|+|||.+.+..++.++||||||+++|||++|+.||...... .+...... ...
T Consensus 187 ~-~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-----~~~~~~~~~~~~~~~~~~~ 260 (309)
T 2h34_A 187 E-KLTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLS-----VMGAHINQAIPRPSTVRPG 260 (309)
T ss_dssp -----------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHH-----HHHHHHHSCCCCGGGTSTT
T ss_pred c-ccccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHH-----HHHHHhccCCCCccccCCC
Confidence 2 112234567999999999999889999999999999999999999999854211 11111111 112
Q ss_pred CChhHHHHHHhhcCCChhhHH-hHHHHHHHHHhhh
Q 042825 594 NHDTFQMAIDKTIQLDEENLA-NVSTVAELGDHCC 627 (631)
Q Consensus 594 ~~~~l~~~id~~L~~d~~~r~-~~~~vl~lal~C~ 627 (631)
.+.++.+++.+++..||.+|+ ++.++++......
T Consensus 261 ~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l 295 (309)
T 2h34_A 261 IPVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAAL 295 (309)
T ss_dssp CCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTC
T ss_pred CCHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHH
Confidence 346799999999999999998 8888877655443
|
| >3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ... | Back alignment and structure |
|---|
Probab=99.86 E-value=3.6e-21 Score=196.92 Aligned_cols=204 Identities=23% Similarity=0.253 Sum_probs=146.2
Q ss_pred CCcccceeecCCCceEEEEEEecC----CcEEEEEEEecCCCCHHHHHHHHHHHHHHhc---------------------
Q 042825 418 NNFSEENRLGRGGVGTVYKGELKD----GTEVGVKRMELGSVTEQGIAQFESEITVLTK--------------------- 472 (631)
Q Consensus 418 ~~f~~~~~iG~G~fg~Vyk~~~~~----g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~--------------------- 472 (631)
..|...+.||+|+||+||+|+..+ +..||||++.... .....+++.+|++++.+
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 103 (298)
T 3f66_A 25 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRIT-DIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPL 103 (298)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCC-SHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCE
T ss_pred eehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCC-CHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceE
Confidence 457888999999999999998643 3368999987533 44566789999999876
Q ss_pred --------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccC
Q 042825 473 --------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVP 520 (631)
Q Consensus 473 --------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~ 520 (631)
|+|.+++. .....+++.....++.+++.| +.+||+|||+++...
T Consensus 104 ~v~e~~~~~~L~~~l~----~~~~~~~~~~~~~i~~ql~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~ 179 (298)
T 3f66_A 104 VVLPYMKHGDLRNFIR----NETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMY 179 (298)
T ss_dssp EEEECCTTCBHHHHHH----CTTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEECSCGGGCCCS
T ss_pred EEEeCCCCCCHHHHHH----hcccCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEECCCCCEEECccccccccc
Confidence 46666653 234567888888888888765 468999999998764
Q ss_pred CCCc--cccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChHHHHHHHHHhHhh--hcCC
Q 042825 521 ENGK--HSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT-GRKVVDATHSDPEYIIHLATWFQKM--HKNH 595 (631)
Q Consensus 521 ~~~~--~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~Ellt-G~~P~~~~~~~~~~~~~l~~~~~~~--~~~~ 595 (631)
.... ........||+.|+|||.+.+..++.++||||+||++|||++ |..||......... ..+....... ...+
T Consensus 180 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 258 (298)
T 3f66_A 180 DKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDIT-VYLLQGRRLLQPEYCP 258 (298)
T ss_dssp CGGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTTHH-HHHHTTCCCCCCTTCC
T ss_pred ccchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHHHH-HHHhcCCCCCCCccCC
Confidence 2211 112344568889999999999999999999999999999999 55666654433211 1111111111 1124
Q ss_pred hhHHHHHHhhcCCChhhHHhHHHHHHHHHhhh
Q 042825 596 DTFQMAIDKTIQLDEENLANVSTVAELGDHCC 627 (631)
Q Consensus 596 ~~l~~~id~~L~~d~~~r~~~~~vl~lal~C~ 627 (631)
+++.+++.+|+..+|.+|+++.++++......
T Consensus 259 ~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~ 290 (298)
T 3f66_A 259 DPLYEVMLKCWHPKAEMRPSFSELVSRISAIF 290 (298)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 67999999999999999999999988655443
|
| >3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=7.4e-22 Score=199.82 Aligned_cols=194 Identities=18% Similarity=0.253 Sum_probs=144.5
Q ss_pred hcCCcccceeecCCCceEEEEEEecC-CcEEEEEEEecCCCCHHHHHHHHHHHHHHhc----------------------
Q 042825 416 ATNNFSEENRLGRGGVGTVYKGELKD-GTEVGVKRMELGSVTEQGIAQFESEITVLTK---------------------- 472 (631)
Q Consensus 416 ~t~~f~~~~~iG~G~fg~Vyk~~~~~-g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~---------------------- 472 (631)
..++|...+.||+|+||.||+|+... +..||+|++...... ..+++.+|++++.+
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~--~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv 84 (277)
T 3f3z_A 7 INQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVE--DVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLV 84 (277)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCS--CHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccc--hHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEE
Confidence 34578999999999999999999764 789999999764322 35678999999876
Q ss_pred ------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC---------------------------CCcEEEeecccccc
Q 042825 473 ------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG---------------------------DDMRVADFGLVRLV 519 (631)
Q Consensus 473 ------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g---------------------------~~~kl~DFGla~~~ 519 (631)
++|.+++.. ...+++.....|+.+++.| ..+||+|||+++..
T Consensus 85 ~e~~~~~~L~~~~~~-----~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~ 159 (277)
T 3f3z_A 85 MELCTGGELFERVVH-----KRVFRESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARF 159 (277)
T ss_dssp EECCCSCBHHHHHHH-----HCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEEC
T ss_pred EeccCCCcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEecCCCCCcEEEEecccceec
Confidence 455555532 2347888888888887765 35789999999876
Q ss_pred CCCCccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHh----H-hhhcC
Q 042825 520 PENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWF----Q-KMHKN 594 (631)
Q Consensus 520 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~----~-~~~~~ 594 (631)
.... ......||+.|+|||.+.+ .++.++||||+|+++|||++|+.||......+ ....+.... . .....
T Consensus 160 ~~~~---~~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 234 (277)
T 3f3z_A 160 KPGK---MMRTKVGTPYYVSPQVLEG-LYGPECDEWSAGVMMYVLLCGYPPFSAPTDSE-VMLKIREGTFTFPEKDWLNV 234 (277)
T ss_dssp CTTS---CBCCCCSCTTTCCHHHHTT-CBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHCCCCCCHHHHTTS
T ss_pred cCcc---chhccCCCCCccChHHhcc-cCCchhhehhHHHHHHHHHHCCCCCCCCCHHH-HHHHHHhCCCCCCchhhhcC
Confidence 4222 2345679999999999865 49999999999999999999999998643221 111111100 0 01123
Q ss_pred ChhHHHHHHhhcCCChhhHHhHHHHHH
Q 042825 595 HDTFQMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 595 ~~~l~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
++++.+++.++|..||.+|+++.++++
T Consensus 235 ~~~~~~li~~~l~~dp~~R~s~~~~l~ 261 (277)
T 3f3z_A 235 SPQAESLIRRLLTKSPKQRITSLQALE 261 (277)
T ss_dssp CHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred CHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 568999999999999999999998875
|
| >3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=6.2e-22 Score=217.18 Aligned_cols=196 Identities=21% Similarity=0.288 Sum_probs=147.1
Q ss_pred cCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCC-HHHHHHHHHHHHHHhc----------------------
Q 042825 417 TNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVT-EQGIAQFESEITVLTK---------------------- 472 (631)
Q Consensus 417 t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~-~~~~~~~~~Ei~~l~~---------------------- 472 (631)
.++|...+.||+|+||.||+|+.. +|+.||||++...... ....+.+.+|++++.+
T Consensus 25 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 104 (484)
T 3nyv_A 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLV 104 (484)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEE
Confidence 457889999999999999999976 6899999999765432 2345779999999876
Q ss_pred ------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC---------------------------CCcEEEeecccccc
Q 042825 473 ------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG---------------------------DDMRVADFGLVRLV 519 (631)
Q Consensus 473 ------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g---------------------------~~~kl~DFGla~~~ 519 (631)
|+|.+++.. ...+++.....|+.+++.| +.+||+|||+++..
T Consensus 105 ~e~~~~~~L~~~~~~-----~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~ 179 (484)
T 3nyv_A 105 GEVYTGGELFDEIIS-----RKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF 179 (484)
T ss_dssp ECCCCSCBHHHHHHT-----CSCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSTTCCEEECCTTHHHHB
T ss_pred EecCCCCCHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEc
Confidence 455555532 2457888888888887765 35789999999876
Q ss_pred CCCCccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHh-----HhhhcC
Q 042825 520 PENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWF-----QKMHKN 594 (631)
Q Consensus 520 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~-----~~~~~~ 594 (631)
.... ......||+.|+|||++.+ .++.++||||+||++|||++|+.||.+....+ ....+.... ......
T Consensus 180 ~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~-~~~~i~~~~~~~~~~~~~~~ 254 (484)
T 3nyv_A 180 EASK---KMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEYD-ILKKVEKGKYTFELPQWKKV 254 (484)
T ss_dssp CCCC---SHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHCCCCCCSGGGGGS
T ss_pred cccc---ccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCHHH-HHHHHHcCCCCCCCcccccC
Confidence 4222 2344579999999999865 69999999999999999999999998653221 111111100 111123
Q ss_pred ChhHHHHHHhhcCCChhhHHhHHHHHHH
Q 042825 595 HDTFQMAIDKTIQLDEENLANVSTVAEL 622 (631)
Q Consensus 595 ~~~l~~~id~~L~~d~~~r~~~~~vl~l 622 (631)
++++.++|.+||..+|.+|+++.++++-
T Consensus 255 s~~~~~li~~~L~~dp~~R~s~~e~l~h 282 (484)
T 3nyv_A 255 SESAKDLIRKMLTYVPSMRISARDALDH 282 (484)
T ss_dssp CHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred CHHHHHHHHHHCCCChhHCcCHHHHhhC
Confidence 5789999999999999999999998764
|
| >3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.86 E-value=2.7e-21 Score=197.65 Aligned_cols=202 Identities=22% Similarity=0.250 Sum_probs=144.1
Q ss_pred CcccceeecCCCceEEEEEEecC----CcEEEEEEEecCCCCHHHHHHHHHHHHHHhc----------------------
Q 042825 419 NFSEENRLGRGGVGTVYKGELKD----GTEVGVKRMELGSVTEQGIAQFESEITVLTK---------------------- 472 (631)
Q Consensus 419 ~f~~~~~iG~G~fg~Vyk~~~~~----g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~---------------------- 472 (631)
.|...+.||+|+||+||+|+..+ +..||+|++.... .....+.+.+|++++.+
T Consensus 22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 100 (298)
T 3pls_A 22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRIT-EMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHV 100 (298)
T ss_dssp EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCC-SHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEE
T ss_pred EEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccc-cHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEE
Confidence 45567899999999999998542 3379999987533 44566789999999876
Q ss_pred -------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCC
Q 042825 473 -------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPE 521 (631)
Q Consensus 473 -------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~ 521 (631)
|+|.+++. .....+++.....++.+++.| +.+||+|||+++....
T Consensus 101 v~e~~~~~~L~~~~~----~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~ 176 (298)
T 3pls_A 101 LLPYMCHGDLLQFIR----SPQRNPTVKDLISFGLQVARGMEYLAEQKFVHRDLAARNCMLDESFTVKVADFGLARDILD 176 (298)
T ss_dssp EECCCTTCBHHHHHH----CTTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEECCTTSSCTTTT
T ss_pred EEecccCCCHHHHHh----ccccCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCcEEeCcCCCcccccC
Confidence 45555553 234567888888888888776 4689999999986632
Q ss_pred CCc--cccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHhH--hhhcCChh
Q 042825 522 NGK--HSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQ--KMHKNHDT 597 (631)
Q Consensus 522 ~~~--~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~~--~~~~~~~~ 597 (631)
... ........+|..|+|||.+.+..++.++|||||||++|||++|..|+............+..... .....++.
T Consensus 177 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (298)
T 3pls_A 177 REYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLAQGRRLPQPEYCPDS 256 (298)
T ss_dssp GGGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCGGGHHHHHHTTCCCCCCTTCCHH
T ss_pred CcccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCHHHHHHHhhcCCCCCCCccchHH
Confidence 211 11223457889999999999999999999999999999999966655433222111111111110 11122467
Q ss_pred HHHHHHhhcCCChhhHHhHHHHHHHHHh
Q 042825 598 FQMAIDKTIQLDEENLANVSTVAELGDH 625 (631)
Q Consensus 598 l~~~id~~L~~d~~~r~~~~~vl~lal~ 625 (631)
+.+++..|+..||.+|+++.++++....
T Consensus 257 l~~li~~~l~~~p~~Rps~~~ll~~l~~ 284 (298)
T 3pls_A 257 LYQVMQQCWEADPAVRPTFRVLVGEVEQ 284 (298)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred HHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence 9999999999999999999998876543
|
| >3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.86 E-value=1.7e-21 Score=204.65 Aligned_cols=199 Identities=18% Similarity=0.271 Sum_probs=141.8
Q ss_pred cCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhcCChhH------------------
Q 042825 417 TNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTKGTLGR------------------ 477 (631)
Q Consensus 417 t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~gsL~~------------------ 477 (631)
.++|...+.||+|+||.||+|+.. +|+.||||++..........+++.+|+.++.+-....
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 102 (353)
T 3coi_A 23 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY 102 (353)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred CceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccce
Confidence 467899999999999999999975 5999999999776555556778999999987611000
Q ss_pred --Hh-Hhhh-----hcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCCcc
Q 042825 478 --HL-FNWE-----EEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENGKH 525 (631)
Q Consensus 478 --~L-~~~~-----~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~~~ 525 (631)
++ .++. ......+++.....++.+++.| +.+||+|||+++....
T Consensus 103 ~~~lv~e~~~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~---- 178 (353)
T 3coi_A 103 DFYLVMPFMQTDLQKIMGLKFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHADA---- 178 (353)
T ss_dssp CCEEEEECCSEEGGGTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECTTCCEEECSTTCTTC-------
T ss_pred eEEEEeccccCCHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEeECCCCcEEEeecccccCCCC----
Confidence 00 0000 0012357888888888888765 4689999999986531
Q ss_pred ccccccccCccccccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHH------------------
Q 042825 526 SILTKVAGTFGYLAPEYIVT-GRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLAT------------------ 586 (631)
Q Consensus 526 ~~~~~~~gt~~Y~aPE~~~~-~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~------------------ 586 (631)
......||+.|+|||++.+ ..++.++|||||||++|||++|+.||.+..... ....+..
T Consensus 179 -~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~ 256 (353)
T 3coi_A 179 -EMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLD-QLTQILKVTGVPGTEFVQKLNDKAA 256 (353)
T ss_dssp ------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHH-HHHHHHHHHCBCCHHHHTTCSCHHH
T ss_pred -CccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHhCCCCHHHHHHHhhHHH
Confidence 1234678999999999876 678999999999999999999999998653221 1111111
Q ss_pred --HhHh------------hhcCChhHHHHHHhhcCCChhhHHhHHHHHH
Q 042825 587 --WFQK------------MHKNHDTFQMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 587 --~~~~------------~~~~~~~l~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
+... ....+.++.+++.+||..||.+|+++.++++
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~ 305 (353)
T 3coi_A 257 KSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALT 305 (353)
T ss_dssp HHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred HHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 0000 0122567899999999999999999998875
|
| >3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=6.8e-22 Score=217.43 Aligned_cols=195 Identities=21% Similarity=0.293 Sum_probs=141.5
Q ss_pred cCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc-----------------------
Q 042825 417 TNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK----------------------- 472 (631)
Q Consensus 417 t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~----------------------- 472 (631)
.+.|...+.||+|+||+||+|+.. ++..||||++............+.+|++++.+
T Consensus 36 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 115 (494)
T 3lij_A 36 SEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVM 115 (494)
T ss_dssp HHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 446889999999999999999976 58999999998654434445778999999876
Q ss_pred -----CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC---------------------------CCcEEEeeccccccC
Q 042825 473 -----GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG---------------------------DDMRVADFGLVRLVP 520 (631)
Q Consensus 473 -----gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g---------------------------~~~kl~DFGla~~~~ 520 (631)
|+|.+++.. ...+++.....|+.+++.| ..+||+|||+++...
T Consensus 116 e~~~~g~L~~~~~~-----~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~ 190 (494)
T 3lij_A 116 ECYKGGELFDEIIH-----RMKFNEVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFE 190 (494)
T ss_dssp ECCCSCBHHHHHHH-----HSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEECB
T ss_pred ecCCCCcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCChhhEEEeCCCCCCcEEEEECCCCeECC
Confidence 566555532 1357888888888887765 237999999998764
Q ss_pred CCCccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHh-----HhhhcCC
Q 042825 521 ENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWF-----QKMHKNH 595 (631)
Q Consensus 521 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~-----~~~~~~~ 595 (631)
.. ......+||+.|+|||++. ..|+.++||||+||++|||++|+.||.+....+ ....+.... ......+
T Consensus 191 ~~---~~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~-~~~~i~~~~~~~~~~~~~~~s 265 (494)
T 3lij_A 191 NQ---KKMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTDQE-ILRKVEKGKYTFDSPEWKNVS 265 (494)
T ss_dssp TT---BCBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHTCCCCCSGGGTTSC
T ss_pred CC---ccccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHhCCCCCCchhcccCC
Confidence 22 2234567999999999875 569999999999999999999999998653221 111111110 0011235
Q ss_pred hhHHHHHHhhcCCChhhHHhHHHHHH
Q 042825 596 DTFQMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 596 ~~l~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
+++.++|.++|..||.+|+++.++++
T Consensus 266 ~~~~~li~~~L~~dp~~R~s~~e~l~ 291 (494)
T 3lij_A 266 EGAKDLIKQMLQFDSQRRISAQQALE 291 (494)
T ss_dssp HHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred HHHHHHHHHHCCCChhhCccHHHHhc
Confidence 68999999999999999999999875
|
| >3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.86 E-value=1.1e-21 Score=207.80 Aligned_cols=201 Identities=23% Similarity=0.259 Sum_probs=136.9
Q ss_pred CcccceeecCCCceEEEEEEec--C--CcEEEEEEEecCCCCHHHHHHHHHHHHHHhc----------------------
Q 042825 419 NFSEENRLGRGGVGTVYKGELK--D--GTEVGVKRMELGSVTEQGIAQFESEITVLTK---------------------- 472 (631)
Q Consensus 419 ~f~~~~~iG~G~fg~Vyk~~~~--~--g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~---------------------- 472 (631)
.|...+.||+|+||+||+|++. + +..||||.++... .....++|.+|+.++.+
T Consensus 90 ~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~l 168 (373)
T 3c1x_A 90 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRIT-DIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLV 168 (373)
T ss_dssp EEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCS-CSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEE
T ss_pred eeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCC-CHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEE
Confidence 4667789999999999999864 2 2468999886532 33466889999998876
Q ss_pred -------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCC
Q 042825 473 -------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPE 521 (631)
Q Consensus 473 -------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~ 521 (631)
|+|.+++. .....+++.....++.++++| +.+||+|||+++....
T Consensus 169 v~e~~~~g~L~~~l~----~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~ 244 (373)
T 3c1x_A 169 VLPYMKHGDLRNFIR----NETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYD 244 (373)
T ss_dssp EEECCTTCBHHHHHH----CTTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCC--------
T ss_pred EEECCCCCCHHHHHh----hcccCCCHHHHHHHHHHHHHHHHHHHHCCEecCccchheEEECCCCCEEEeeccccccccc
Confidence 46666653 233457888888888888876 4689999999987642
Q ss_pred CCcc--ccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChHHHHHHHHHhHh--hhcCCh
Q 042825 522 NGKH--SILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT-GRKVVDATHSDPEYIIHLATWFQK--MHKNHD 596 (631)
Q Consensus 522 ~~~~--~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~Ellt-G~~P~~~~~~~~~~~~~l~~~~~~--~~~~~~ 596 (631)
.... .......+|+.|+|||++.+..++.++|||||||++|||+| |..||......+.. ..+...... ....++
T Consensus 245 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~~~-~~~~~~~~~~~p~~~~~ 323 (373)
T 3c1x_A 245 KEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDIT-VYLLQGRRLLQPEYCPD 323 (373)
T ss_dssp -------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSCHH-HHHHTTCCCCCCTTCCH
T ss_pred cccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHHHH-HHHHcCCCCCCCCCCCH
Confidence 2211 12234567889999999999999999999999999999999 67788765443221 111111111 111346
Q ss_pred hHHHHHHhhcCCChhhHHhHHHHHHHHHh
Q 042825 597 TFQMAIDKTIQLDEENLANVSTVAELGDH 625 (631)
Q Consensus 597 ~l~~~id~~L~~d~~~r~~~~~vl~lal~ 625 (631)
++.+++.+|+..||.+||++.++++....
T Consensus 324 ~l~~li~~cl~~dp~~RPs~~ell~~L~~ 352 (373)
T 3c1x_A 324 PLYEVMLKCWHPKAEMRPSFSELVSRISA 352 (373)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred HHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence 79999999999999999999998875443
|
| >3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} | Back alignment and structure |
|---|
Probab=99.86 E-value=1.1e-21 Score=216.33 Aligned_cols=197 Identities=21% Similarity=0.308 Sum_probs=144.9
Q ss_pred hcCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCH-----------HHHHHHHHHHHHHhc-----------
Q 042825 416 ATNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTE-----------QGIAQFESEITVLTK----------- 472 (631)
Q Consensus 416 ~t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~-----------~~~~~~~~Ei~~l~~----------- 472 (631)
..++|...+.||+|+||+||+|+.. +++.||||++....... ...+.+.+|++++.+
T Consensus 34 i~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~ 113 (504)
T 3q5i_A 34 IGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFD 113 (504)
T ss_dssp GGGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEE
T ss_pred cccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEE
Confidence 4678999999999999999999976 58899999997643221 234678999999876
Q ss_pred -----------------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC---------------------------CCc
Q 042825 473 -----------------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG---------------------------DDM 508 (631)
Q Consensus 473 -----------------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g---------------------------~~~ 508 (631)
|+|.+++.. ...+++.....|+.+++.| ..+
T Consensus 114 ~~~~~~~~~lv~e~~~gg~L~~~l~~-----~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~ 188 (504)
T 3q5i_A 114 VFEDKKYFYLVTEFYEGGELFEQIIN-----RHKFDECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNI 188 (504)
T ss_dssp EEECSSEEEEEEECCTTCBHHHHHHH-----HSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESSTTCCSSE
T ss_pred EEEcCCEEEEEEecCCCCcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCcHHHEEEecCCCCccE
Confidence 566665542 1358888888888888766 147
Q ss_pred EEEeeccccccCCCCccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHH-
Q 042825 509 RVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATW- 587 (631)
Q Consensus 509 kl~DFGla~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~- 587 (631)
||+|||+++..... .......||+.|+|||++. ..++.++||||+||++|||++|+.||.+....+ ....+...
T Consensus 189 kl~Dfg~a~~~~~~---~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~-~~~~i~~~~ 263 (504)
T 3q5i_A 189 KIVDFGLSSFFSKD---YKLRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQD-IIKKVEKGK 263 (504)
T ss_dssp EECCCTTCEECCTT---SCBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHCC
T ss_pred EEEECCCCEEcCCC---CccccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHcCC
Confidence 99999999876422 2234567999999999986 569999999999999999999999998653321 11111110
Q ss_pred ----hHhhhcCChhHHHHHHhhcCCChhhHHhHHHHHHH
Q 042825 588 ----FQKMHKNHDTFQMAIDKTIQLDEENLANVSTVAEL 622 (631)
Q Consensus 588 ----~~~~~~~~~~l~~~id~~L~~d~~~r~~~~~vl~l 622 (631)
.......++++.++|.++|..||.+|+++.++++-
T Consensus 264 ~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~h 302 (504)
T 3q5i_A 264 YYFDFNDWKNISDEAKELIKLMLTYDYNKRCTAEEALNS 302 (504)
T ss_dssp CCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred CCCCccccCCCCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 01112335789999999999999999999998753
|
| >3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0 | Back alignment and structure |
|---|
Probab=99.86 E-value=8.5e-22 Score=198.59 Aligned_cols=191 Identities=24% Similarity=0.355 Sum_probs=132.6
Q ss_pred cCCcccceeecCCCceEEEEEEecCCcEEEEEEEecCCCC--HHHHHHHHHHHHHHhc----------------------
Q 042825 417 TNNFSEENRLGRGGVGTVYKGELKDGTEVGVKRMELGSVT--EQGIAQFESEITVLTK---------------------- 472 (631)
Q Consensus 417 t~~f~~~~~iG~G~fg~Vyk~~~~~g~~vAvK~l~~~~~~--~~~~~~~~~Ei~~l~~---------------------- 472 (631)
.++|+..+.||+|+||.||+|+.. |+.||||++...... ....+.+.+|++++.+
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 84 (271)
T 3dtc_A 6 FAELTLEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLV 84 (271)
T ss_dssp TTSEEEEEEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEE
T ss_pred hhheeeeeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEE
Confidence 457889999999999999999975 889999998654321 1234678899988875
Q ss_pred ------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC-----------------------------------CCcEEE
Q 042825 473 ------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG-----------------------------------DDMRVA 511 (631)
Q Consensus 473 ------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g-----------------------------------~~~kl~ 511 (631)
++|.+++. ...+++.....++.+++.| +.+||+
T Consensus 85 ~e~~~~~~L~~~~~------~~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~ 158 (271)
T 3dtc_A 85 MEFARGGPLNRVLS------GKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKIT 158 (271)
T ss_dssp EECCTTEEHHHHHT------SSCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEEC
T ss_pred EEcCCCCCHHHHhh------cCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEc
Confidence 33333331 2467888888887776654 237899
Q ss_pred eeccccccCCCCccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHhHh-
Q 042825 512 DFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQK- 590 (631)
Q Consensus 512 DFGla~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~~~- 590 (631)
|||+++..... ......||+.|+|||.+.+..++.++||||||+++|||++|+.||...... . ........
T Consensus 159 Dfg~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~--~--~~~~~~~~~ 230 (271)
T 3dtc_A 159 DFGLAREWHRT----TKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGL--A--VAYGVAMNK 230 (271)
T ss_dssp CCCC-----------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHH--H--HHHHHHTSC
T ss_pred cCCcccccccc----cccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--H--HHHhhhcCC
Confidence 99999876422 123457999999999999889999999999999999999999999864321 1 11111111
Q ss_pred -----hhcCChhHHHHHHhhcCCChhhHHhHHHHHHH
Q 042825 591 -----MHKNHDTFQMAIDKTIQLDEENLANVSTVAEL 622 (631)
Q Consensus 591 -----~~~~~~~l~~~id~~L~~d~~~r~~~~~vl~l 622 (631)
....++++.+++.+|+..||.+|+++.++++.
T Consensus 231 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~ 267 (271)
T 3dtc_A 231 LALPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQ 267 (271)
T ss_dssp CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred CCCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHHHH
Confidence 11224679999999999999999999998874
|
| >2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.86 E-value=5.1e-22 Score=205.99 Aligned_cols=202 Identities=21% Similarity=0.300 Sum_probs=139.7
Q ss_pred CHHHHHhhcCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc---------------
Q 042825 409 PIQVLRNATNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK--------------- 472 (631)
Q Consensus 409 ~~~~l~~~t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~--------------- 472 (631)
++.++....++|...+.||+|+||.||+|+.. +|+.||||++..... ..+.+.+|+.++.+
T Consensus 15 ~~~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~---~~~~~~~e~~~l~~l~~h~~i~~~~~~~~ 91 (326)
T 2x7f_A 15 DLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGD---EEEEIKQEINMLKKYSHHRNIATYYGAFI 91 (326)
T ss_dssp -CCCCCCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSS---TTHHHHHHHHHHHHHCCSTTBCCEEEEEE
T ss_pred cchhccCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCcc---cHHHHHHHHHHHHhccCCCCeeeeeeEEe
Confidence 33445567889999999999999999999975 689999999975432 23567788877654
Q ss_pred --------------------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCc
Q 042825 473 --------------------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDM 508 (631)
Q Consensus 473 --------------------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~ 508 (631)
|+|.+++... ....+++.....++.+++.| +.+
T Consensus 92 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~ 168 (326)
T 2x7f_A 92 KKNPPGMDDQLWLVMEFCGAGSVTDLIKNT---KGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEV 168 (326)
T ss_dssp ECC--CCCCEEEEEEECCTTEEHHHHHHHS---GGGCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTCCE
T ss_pred eccCccccceEEEEEEcCCCCcHHHHHHhc---ccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCcHHHEEEcCCCCE
Confidence 2444444321 12457788888888777765 568
Q ss_pred EEEeeccccccCCCCccccccccccCcccccccccc-----cCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHH
Q 042825 509 RVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIV-----TGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIH 583 (631)
Q Consensus 509 kl~DFGla~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-----~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~ 583 (631)
||+|||+++..... ........||+.|+|||++. ...++.++|||||||++|||++|+.||...... . .
T Consensus 169 kl~Dfg~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--~--~ 242 (326)
T 2x7f_A 169 KLVDFGVSAQLDRT--VGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPM--R--A 242 (326)
T ss_dssp EECCCTTTC---------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHH--H--H
T ss_pred EEeeCcCceecCcC--ccccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHH--H--H
Confidence 99999999876321 11234457999999999986 556899999999999999999999999754321 1 1
Q ss_pred HHHHhHhh------hcCChhHHHHHHhhcCCChhhHHhHHHHHHH
Q 042825 584 LATWFQKM------HKNHDTFQMAIDKTIQLDEENLANVSTVAEL 622 (631)
Q Consensus 584 l~~~~~~~------~~~~~~l~~~id~~L~~d~~~r~~~~~vl~l 622 (631)
+....... ...+..+.+++.+||..||.+|+++.++++-
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 287 (326)
T 2x7f_A 243 LFLIPRNPAPRLKSKKWSKKFQSFIESCLVKNHSQRPATEQLMKH 287 (326)
T ss_dssp HHHHHHSCCCCCSCSCSCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred HHHhhcCccccCCccccCHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 11111111 1124689999999999999999999998763
|
| >3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A | Back alignment and structure |
|---|
Probab=99.86 E-value=3.5e-22 Score=207.61 Aligned_cols=187 Identities=19% Similarity=0.259 Sum_probs=120.5
Q ss_pred ceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc-----------------------------
Q 042825 423 ENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK----------------------------- 472 (631)
Q Consensus 423 ~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~----------------------------- 472 (631)
.+.||+|+||+||+|+.. +++.||||++... ....+.+|+.++.+
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-----~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~ 90 (325)
T 3kn6_A 16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKR-----MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNG 90 (325)
T ss_dssp SCCSEEETTEEEEEEEETTTCCEEEEEEEEGG-----GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCS
T ss_pred CCccccCCCeEEEEEEECCCCCEEEEEEEChh-----hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCC
Confidence 478999999999999976 5899999999753 34567788877754
Q ss_pred CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------C---CcEEEeeccccccCCCCcc
Q 042825 473 GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------D---DMRVADFGLVRLVPENGKH 525 (631)
Q Consensus 473 gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~---~~kl~DFGla~~~~~~~~~ 525 (631)
|+|.+++.. ...+++.....|+.+++.| + .+||+|||+++..... .
T Consensus 91 ~~L~~~l~~-----~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~--~ 163 (325)
T 3kn6_A 91 GELFERIKK-----KKHFSETEASYIMRKLVSAVSHMHDVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPD--N 163 (325)
T ss_dssp CBHHHHHHH-----CSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEC----CEEEECCCTTCEECCC----
T ss_pred CcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCHHHEEEecCCCcccEEEeccccceecCCC--C
Confidence 566666642 2468888888888888776 1 5789999999876422 2
Q ss_pred ccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCh---HHHHHHHHHhHhh--------hcC
Q 042825 526 SILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDP---EYIIHLATWFQKM--------HKN 594 (631)
Q Consensus 526 ~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~---~~~~~l~~~~~~~--------~~~ 594 (631)
......+||+.|+|||++.+..++.++||||+||++|||++|+.||....... .....+....... ...
T Consensus 164 ~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 243 (325)
T 3kn6_A 164 QPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEGEAWKNV 243 (325)
T ss_dssp --------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHHHTTTCCCCCSHHHHTS
T ss_pred CcccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHHHHcCCCCCCcccccCC
Confidence 23345678999999999999999999999999999999999999997543210 0011111111100 123
Q ss_pred ChhHHHHHHhhcCCChhhHHhHHHHHH
Q 042825 595 HDTFQMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 595 ~~~l~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
++++.+++.++|..||.+|+++.++++
T Consensus 244 s~~~~~li~~~L~~dP~~Rpt~~ell~ 270 (325)
T 3kn6_A 244 SQEAKDLIQGLLTVDPNKRLKMSGLRY 270 (325)
T ss_dssp CHHHHHHHHHHHCCCTTTCCCTTTSTT
T ss_pred CHHHHHHHHHHCCCChhHCCCHHHHhc
Confidence 578999999999999999999887654
|
| >1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.86 E-value=1.9e-21 Score=202.75 Aligned_cols=202 Identities=21% Similarity=0.322 Sum_probs=141.6
Q ss_pred CCcccceeecCCCceEEEEEEecC-----CcEEEEEEEecCCCCHHHHHHHHHHHHHHhc--------------------
Q 042825 418 NNFSEENRLGRGGVGTVYKGELKD-----GTEVGVKRMELGSVTEQGIAQFESEITVLTK-------------------- 472 (631)
Q Consensus 418 ~~f~~~~~iG~G~fg~Vyk~~~~~-----g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~-------------------- 472 (631)
++|...+.||+|+||+||+|+... +..||||++.... ......++.+|++++.+
T Consensus 44 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 122 (333)
T 1mqb_A 44 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGY-TEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMM 122 (333)
T ss_dssp TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTC-CHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEE
T ss_pred HHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCC-CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcE
Confidence 467778999999999999998653 3469999997543 44566789999999876
Q ss_pred --------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccC
Q 042825 473 --------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVP 520 (631)
Q Consensus 473 --------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~ 520 (631)
|+|.+++.. ....+++.....++.+++.| +.+||+|||+++...
T Consensus 123 lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~ 198 (333)
T 1mqb_A 123 IITEYMENGALDKFLRE----KDGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLE 198 (333)
T ss_dssp EEEECCTTEEHHHHHHH----TTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCCCC-----
T ss_pred EEEeCCCCCcHHHHHHh----CCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChheEEECCCCcEEECCCCcchhhc
Confidence 466666642 23468899999999888876 467899999998764
Q ss_pred CCCcc-ccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChHHHHHHHHHhH--hhhcCCh
Q 042825 521 ENGKH-SILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT-GRKVVDATHSDPEYIIHLATWFQ--KMHKNHD 596 (631)
Q Consensus 521 ~~~~~-~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~Ellt-G~~P~~~~~~~~~~~~~l~~~~~--~~~~~~~ 596 (631)
..... .......+|+.|+|||.+.+..++.++|||||||++|||++ |+.||......+ ....+....+ .....++
T Consensus 199 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~ 277 (333)
T 1mqb_A 199 DDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHE-VMKAINDGFRLPTPMDCPS 277 (333)
T ss_dssp ------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH-HHHHHHTTCCCCCCTTCBH
T ss_pred cccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHHH-HHHHHHCCCcCCCcccCCH
Confidence 22111 11223456889999999998899999999999999999999 999997543211 1111111100 0112246
Q ss_pred hHHHHHHhhcCCChhhHHhHHHHHHHHHh
Q 042825 597 TFQMAIDKTIQLDEENLANVSTVAELGDH 625 (631)
Q Consensus 597 ~l~~~id~~L~~d~~~r~~~~~vl~lal~ 625 (631)
.+.+++.+|+..+|.+||++.++++....
T Consensus 278 ~l~~li~~~l~~~p~~Rps~~~l~~~L~~ 306 (333)
T 1mqb_A 278 AIYQLMMQCWQQERARRPKFADIVSILDK 306 (333)
T ss_dssp HHHHHHHHHTCSSTTTSCCHHHHHHHHHH
T ss_pred HHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence 79999999999999999999998876443
|
| >3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} | Back alignment and structure |
|---|
Probab=99.86 E-value=3.2e-21 Score=202.87 Aligned_cols=203 Identities=19% Similarity=0.215 Sum_probs=129.1
Q ss_pred HHHHhhcCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHh---c--------------
Q 042825 411 QVLRNATNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLT---K-------------- 472 (631)
Q Consensus 411 ~~l~~~t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~---~-------------- 472 (631)
.+.....++|...+.||+|+||+||+|+.. +|+.||||++....... .++.+|++.+. +
T Consensus 16 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~~~~l~~l~h~niv~~~~~~~~~~ 92 (360)
T 3e3p_A 16 ERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFR---NRELQIMQDLAVLHHPNIVQLQSYFYTLG 92 (360)
T ss_dssp HHHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCTTCC---CHHHHHHHHHHHHCCTTBCCEEEEEEEEC
T ss_pred hhchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCcccc---HHHHHHHHHHHhcCCCCcccHHHhhhccc
Confidence 456677889999999999999999999975 58999999986543222 23344444433 2
Q ss_pred -----------------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC---------------------------CCc
Q 042825 473 -----------------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG---------------------------DDM 508 (631)
Q Consensus 473 -----------------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g---------------------------~~~ 508 (631)
+++...+..+. .....+.+.....++.+++.+ +.+
T Consensus 93 ~~~~~~~~~~lv~e~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~ivH~Dlkp~NIll~~~~~~~ 171 (360)
T 3e3p_A 93 ERDRRDIYLNVVMEYVPDTLHRCCRNYY-RRQVAPPPILIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTL 171 (360)
T ss_dssp SSCTTCEEEEEEEECCSCBHHHHHHHHH-TTTCCCCHHHHHHHHHHHHHHHHHHTSTTTCCBCSCCCGGGEEEETTTTEE
T ss_pred cccccceeEEEEeecccccHHHHHHHHh-hcccCCCHHHHHHHHHHHHHHHHHHhCCCCCeecCcCCHHHEEEeCCCCcE
Confidence 22222222211 223456676666666555432 357
Q ss_pred EEEeeccccccCCCCccccccccccCcccccccccccCC-CCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHH
Q 042825 509 RVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGR-ITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATW 587 (631)
Q Consensus 509 kl~DFGla~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~ 587 (631)
||+|||+++...... ......||+.|+|||++.+.. ++.++|||||||++|||++|+.||.+..... ....+...
T Consensus 172 kl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~-~~~~~~~~ 247 (360)
T 3e3p_A 172 KLCDFGSAKKLSPSE---PNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAG-QLHEIVRV 247 (360)
T ss_dssp EECCCTTCBCCCTTS---CCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHH
T ss_pred EEeeCCCceecCCCC---CcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHH-HHHHHHHH
Confidence 899999998764222 234567899999999986654 8999999999999999999999998654321 11112111
Q ss_pred h--------Hh---------------------hhc----CChhHHHHHHhhcCCChhhHHhHHHHHH
Q 042825 588 F--------QK---------------------MHK----NHDTFQMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 588 ~--------~~---------------------~~~----~~~~l~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
. .. ... .++++.+++.+||..||.+|+++.++++
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 314 (360)
T 3e3p_A 248 LGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALC 314 (360)
T ss_dssp HCCCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred cCCCCHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhc
Confidence 0 00 000 2357899999999999999999998875
|
| >2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.85 E-value=2.6e-21 Score=199.81 Aligned_cols=204 Identities=18% Similarity=0.233 Sum_probs=146.1
Q ss_pred cCCcccceeecCCCceEEEEEEe-cCCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc-----------------------
Q 042825 417 TNNFSEENRLGRGGVGTVYKGEL-KDGTEVGVKRMELGSVTEQGIAQFESEITVLTK----------------------- 472 (631)
Q Consensus 417 t~~f~~~~~iG~G~fg~Vyk~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~----------------------- 472 (631)
.++|...+.||+|+||.||+++. .+|+.||||++... .....+.+.+|++++.+
T Consensus 28 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 105 (317)
T 2buj_A 28 NKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCH--EQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEA 105 (317)
T ss_dssp TEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEES--SHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEE
T ss_pred CeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecC--CHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCcee
Confidence 45789999999999999999997 46999999998754 34566788999998876
Q ss_pred ---------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeecccccc
Q 042825 473 ---------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLV 519 (631)
Q Consensus 473 ---------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~ 519 (631)
|+|.+++.... .....+++.....++.+++.| +.+||+|||+++..
T Consensus 106 ~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~ 184 (317)
T 2buj_A 106 WLLLPFFKRGTLWNEIERLK-DKGNFLTEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQA 184 (317)
T ss_dssp EEEEECCTTCBHHHHHHHHH-TTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCSSCEES
T ss_pred EEEEEeCCCCcHHHHHHHHH-hcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcCCCCEEEEecCcchhc
Confidence 46666665422 234568999999999888876 56789999998765
Q ss_pred CCCCcc-------ccccccccCcccccccccccCC---CCchhhHHHHHHHHHHHHcCCCCCCCCC--CChHHHHHHHHH
Q 042825 520 PENGKH-------SILTKVAGTFGYLAPEYIVTGR---ITAKVDVYSFGMILMDLITGRKVVDATH--SDPEYIIHLATW 587 (631)
Q Consensus 520 ~~~~~~-------~~~~~~~gt~~Y~aPE~~~~~~---~~~k~DVwS~GvvL~ElltG~~P~~~~~--~~~~~~~~l~~~ 587 (631)
...... .......||+.|+|||.+.... ++.++|||||||++|||++|+.||+... ... ....+..-
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~-~~~~~~~~ 263 (317)
T 2buj_A 185 CIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDS-VALAVQNQ 263 (317)
T ss_dssp CEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSC-HHHHHHCC
T ss_pred ccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccch-hhHHhhcc
Confidence 311100 0112346799999999987554 7899999999999999999999996311 010 11111110
Q ss_pred h--HhhhcCChhHHHHHHhhcCCChhhHHhHHHHHHHHH
Q 042825 588 F--QKMHKNHDTFQMAIDKTIQLDEENLANVSTVAELGD 624 (631)
Q Consensus 588 ~--~~~~~~~~~l~~~id~~L~~d~~~r~~~~~vl~lal 624 (631)
. ......+.++.+++.+||..||.+|+++.++++...
T Consensus 264 ~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~ 302 (317)
T 2buj_A 264 LSIPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLE 302 (317)
T ss_dssp --CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CCCCccccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhh
Confidence 0 011123468999999999999999999999988543
|
| >2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=8.7e-22 Score=199.09 Aligned_cols=197 Identities=22% Similarity=0.303 Sum_probs=137.5
Q ss_pred cCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCC-HHHHHHHHHHHHHHhc----------------------
Q 042825 417 TNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVT-EQGIAQFESEITVLTK---------------------- 472 (631)
Q Consensus 417 t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~-~~~~~~~~~Ei~~l~~---------------------- 472 (631)
.++|...+.||+|+||.||+|+.. +|+.||||++...... ....+.+.+|++++.+
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 89 (276)
T 2h6d_A 10 IGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMV 89 (276)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred eccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEE
Confidence 467999999999999999999976 6999999999753211 1234578899988876
Q ss_pred ------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCC
Q 042825 473 ------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPEN 522 (631)
Q Consensus 473 ------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~ 522 (631)
++|.+++.. ...+++.....++.+++.| +.+||+|||+++.....
T Consensus 90 ~e~~~~~~L~~~l~~-----~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~ 164 (276)
T 2h6d_A 90 MEYVSGGELFDYICK-----HGRVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDG 164 (276)
T ss_dssp EECCCSCBHHHHHHH-----HCSCCHHHHHHHHHHHHHHHHHHHHHCSSCCCCCGGGEEECTTSCEEECCCCGGGCCCC-
T ss_pred EeccCCCcHHHHHhc-----cCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChhhEEECCCCCEEEeecccccccCCC
Confidence 566666642 1357888888888888765 46789999999876422
Q ss_pred CccccccccccCcccccccccccCCC-CchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHhH-hhhcCChhHHH
Q 042825 523 GKHSILTKVAGTFGYLAPEYIVTGRI-TAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQ-KMHKNHDTFQM 600 (631)
Q Consensus 523 ~~~~~~~~~~gt~~Y~aPE~~~~~~~-~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~~-~~~~~~~~l~~ 600 (631)
.......||+.|+|||.+.+..+ +.++||||+|+++|||++|+.||+...... ....+..... .....+..+.+
T Consensus 165 ---~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~ 240 (276)
T 2h6d_A 165 ---EFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPT-LFKKIRGGVFYIPEYLNRSVAT 240 (276)
T ss_dssp ---------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHCCCCCCTTSCHHHHH
T ss_pred ---cceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcHHH-HHHHhhcCcccCchhcCHHHHH
Confidence 12334578999999999987765 689999999999999999999997643211 1111111100 01112468999
Q ss_pred HHHhhcCCChhhHHhHHHHHHH
Q 042825 601 AIDKTIQLDEENLANVSTVAEL 622 (631)
Q Consensus 601 ~id~~L~~d~~~r~~~~~vl~l 622 (631)
++.+|+..||.+|+++.++++-
T Consensus 241 li~~~l~~~p~~Rps~~~~l~h 262 (276)
T 2h6d_A 241 LLMHMLQVDPLKRATIKDIREH 262 (276)
T ss_dssp HHHHHTCSSGGGSCCHHHHHHS
T ss_pred HHHHHccCChhhCCCHHHHHhC
Confidence 9999999999999999998874
|
| >4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=6.2e-22 Score=223.68 Aligned_cols=197 Identities=20% Similarity=0.237 Sum_probs=142.7
Q ss_pred eeecCCCceEEEEEEec---CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc---------------------------C
Q 042825 424 NRLGRGGVGTVYKGELK---DGTEVGVKRMELGSVTEQGIAQFESEITVLTK---------------------------G 473 (631)
Q Consensus 424 ~~iG~G~fg~Vyk~~~~---~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~---------------------------g 473 (631)
+.||+|+||+||+|.+. .++.||||+++.........++|.+|+++|.+ |
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~lv~E~~~~g 454 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELG 454 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEESSSEEEEEECCTTE
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEEEccCCC
Confidence 57999999999999753 46789999998655444556889999999876 5
Q ss_pred ChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCCc-cccc
Q 042825 474 TLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENGK-HSIL 528 (631)
Q Consensus 474 sL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~~-~~~~ 528 (631)
+|.+++.. ...+++..+..|+.+++.| +.+||+|||+++.+..... ....
T Consensus 455 ~L~~~l~~-----~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~ 529 (635)
T 4fl3_A 455 PLNKYLQQ-----NRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ 529 (635)
T ss_dssp EHHHHHHH-----CTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC--------
T ss_pred CHHHHHhh-----CCCCCHHHHHHHHHHHHHHHHHHHHCCEeCCCCChHhEEEeCCCCEEEEEcCCccccccCccccccc
Confidence 56666632 2468899999999988876 4578999999987743221 1223
Q ss_pred cccccCcccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChHHHHHHHHHhH--hhhcCChhHHHHHHhh
Q 042825 529 TKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT-GRKVVDATHSDPEYIIHLATWFQ--KMHKNHDTFQMAIDKT 605 (631)
Q Consensus 529 ~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~Ellt-G~~P~~~~~~~~~~~~~l~~~~~--~~~~~~~~l~~~id~~ 605 (631)
....+|+.|+|||++.+..++.++|||||||++|||+| |+.||.+....+ ....+..... .....++++.+++..|
T Consensus 530 ~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~-~~~~i~~~~~~~~p~~~~~~l~~li~~c 608 (635)
T 4fl3_A 530 THGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE-VTAMLEKGERMGCPAGCPREMYDLMNLC 608 (635)
T ss_dssp -----CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH-HHHHHHTTCCCCCCTTCCHHHHHHHHHH
T ss_pred cCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHH-HHHHHHcCCCCCCCCCCCHHHHHHHHHH
Confidence 34567889999999999999999999999999999999 999998654321 1111111100 0112246899999999
Q ss_pred cCCChhhHHhHHHHHHHHHhh
Q 042825 606 IQLDEENLANVSTVAELGDHC 626 (631)
Q Consensus 606 L~~d~~~r~~~~~vl~lal~C 626 (631)
+..||++|+++.++++....+
T Consensus 609 l~~dP~~RPs~~~l~~~L~~~ 629 (635)
T 4fl3_A 609 WTYDVENRPGFAAVELRLRNY 629 (635)
T ss_dssp TCSSTTTSCCHHHHHHHHHHH
T ss_pred cCCCHhHCcCHHHHHHHHHHH
Confidence 999999999999988765443
|
| >3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=99.85 E-value=2.9e-21 Score=205.28 Aligned_cols=197 Identities=15% Similarity=0.216 Sum_probs=138.4
Q ss_pred HhhcCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc--------------------
Q 042825 414 RNATNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK-------------------- 472 (631)
Q Consensus 414 ~~~t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~-------------------- 472 (631)
+...++|...+.||+|+||+||+|+.. +|+.||||++..... ...+|+++++.
T Consensus 3 ~~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~------~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 76 (383)
T 3eb0_A 3 ETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR------YKNRELDIMKVLDHVNIIKLVDYFYTTGDEE 76 (383)
T ss_dssp ---CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTT------SCCHHHHHHTTCCCTTBCCEEEEEEEC----
T ss_pred ccccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcc------hHHHHHHHHHHcCCCCccchhheeeecCccc
Confidence 456778999999999999999999864 699999999975432 12356666654
Q ss_pred ---------------------------------------------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC--
Q 042825 473 ---------------------------------------------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG-- 505 (631)
Q Consensus 473 ---------------------------------------------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g-- 505 (631)
|+|.+.+..+. .....+++.....++.++++|
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~-~~~~~l~~~~~~~i~~qi~~aL~ 155 (383)
T 3eb0_A 77 PKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPDTLHKVLKSFI-RSGRSIPMNLISIYIYQLFRAVG 155 (383)
T ss_dssp ---------------------------------CCEEEEEECCCSEEHHHHHHHHH-HTTCCCCHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccccccccccCCCceEEEEEEecCCccHHHHHHHHH-hcCCCCCHHHHHHHHHHHHHHHH
Confidence 12222332222 223568888888888888765
Q ss_pred -----------------------CCcEEEeeccccccCCCCccccccccccCcccccccccccC-CCCchhhHHHHHHHH
Q 042825 506 -----------------------DDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTG-RITAKVDVYSFGMIL 561 (631)
Q Consensus 506 -----------------------~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~k~DVwS~GvvL 561 (631)
+.+||+|||+|+...... ......||..|+|||.+.+. .++.++||||+||++
T Consensus 156 ~LH~~gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il 232 (383)
T 3eb0_A 156 FIHSLGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSE---PSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVF 232 (383)
T ss_dssp HHHTTTEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTS---CCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHH
T ss_pred HHHHCcCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCC---CCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHH
Confidence 347899999998764222 23456789999999998765 499999999999999
Q ss_pred HHHHcCCCCCCCCCCChHHHHHHHHH-----------------------------hHhhh-cCChhHHHHHHhhcCCChh
Q 042825 562 MDLITGRKVVDATHSDPEYIIHLATW-----------------------------FQKMH-KNHDTFQMAIDKTIQLDEE 611 (631)
Q Consensus 562 ~ElltG~~P~~~~~~~~~~~~~l~~~-----------------------------~~~~~-~~~~~l~~~id~~L~~d~~ 611 (631)
|||++|+.||.+....+ ....+... ..... ..+.++.+++.++|..||.
T Consensus 233 ~ell~g~~pf~~~~~~~-~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~ 311 (383)
T 3eb0_A 233 GELILGKPLFSGETSID-QLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPD 311 (383)
T ss_dssp HHHHHSSCSSCCSSHHH-HHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGG
T ss_pred HHHHhCCCCCCCCChHH-HHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCChh
Confidence 99999999998653321 11111110 00000 1245689999999999999
Q ss_pred hHHhHHHHHH
Q 042825 612 NLANVSTVAE 621 (631)
Q Consensus 612 ~r~~~~~vl~ 621 (631)
+|+++.++++
T Consensus 312 ~R~t~~e~l~ 321 (383)
T 3eb0_A 312 LRINPYEAMA 321 (383)
T ss_dssp GSCCHHHHHT
T ss_pred hCCCHHHHhc
Confidence 9999998874
|
| >2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=6.7e-21 Score=199.54 Aligned_cols=194 Identities=20% Similarity=0.273 Sum_probs=141.4
Q ss_pred hcCCcccceeecCCCceEEEEEEec-CC-cEEEEEEEecCCCCHHHHHHHHHHHHHHhc---------------------
Q 042825 416 ATNNFSEENRLGRGGVGTVYKGELK-DG-TEVGVKRMELGSVTEQGIAQFESEITVLTK--------------------- 472 (631)
Q Consensus 416 ~t~~f~~~~~iG~G~fg~Vyk~~~~-~g-~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~--------------------- 472 (631)
..++|...+.||+|+||+||+|+.. ++ +.||||+++.. ....+.+.+|++++.+
T Consensus 17 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~ 93 (355)
T 2eu9_A 17 LQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNV---GKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNF 93 (355)
T ss_dssp ETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSC---HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEE
T ss_pred ecccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEccc---ccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeee
Confidence 3468999999999999999999975 34 78999999643 3445677888877765
Q ss_pred ------------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC-----------------------------------
Q 042825 473 ------------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG----------------------------------- 505 (631)
Q Consensus 473 ------------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g----------------------------------- 505 (631)
+++.+++. ......+++.....|+.+++.|
T Consensus 94 ~~~~~lv~e~~~~~l~~~l~---~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~ 170 (355)
T 2eu9_A 94 HGHMCIAFELLGKNTFEFLK---ENNFQPYPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKS 170 (355)
T ss_dssp TTEEEEEEECCCCBHHHHHH---HTTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEESCCCEEEEECCC-C
T ss_pred CCeEEEEEeccCCChHHHHH---hccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEeccccccccccccc
Confidence 33444432 2233468899999898888765
Q ss_pred --------CCcEEEeeccccccCCCCccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCC
Q 042825 506 --------DDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSD 577 (631)
Q Consensus 506 --------~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~ 577 (631)
..+||+|||+++..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||......
T Consensus 171 ~~~~~~~~~~~kl~Dfg~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~ 245 (355)
T 2eu9_A 171 CEEKSVKNTSIRVADFGSATFDHEH-----HTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENR 245 (355)
T ss_dssp CCEEEESCCCEEECCCTTCEETTSC-----CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH
T ss_pred ccccccCCCcEEEeecCcccccccc-----ccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCHH
Confidence 23689999999875321 23467999999999999999999999999999999999999999864322
Q ss_pred hHHHHHHHHHhHh--------h----------------------------------hc---CChhHHHHHHhhcCCChhh
Q 042825 578 PEYIIHLATWFQK--------M----------------------------------HK---NHDTFQMAIDKTIQLDEEN 612 (631)
Q Consensus 578 ~~~~~~l~~~~~~--------~----------------------------------~~---~~~~l~~~id~~L~~d~~~ 612 (631)
. ....+...... . .. .+.++.+++.+||..||.+
T Consensus 246 ~-~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~ 324 (355)
T 2eu9_A 246 E-HLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQ 324 (355)
T ss_dssp H-HHHHHHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTT
T ss_pred H-HHHHHHHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhh
Confidence 1 11111111000 0 00 0136789999999999999
Q ss_pred HHhHHHHHH
Q 042825 613 LANVSTVAE 621 (631)
Q Consensus 613 r~~~~~vl~ 621 (631)
|+++.++++
T Consensus 325 Rpt~~e~l~ 333 (355)
T 2eu9_A 325 RITLAEALL 333 (355)
T ss_dssp SCCHHHHTT
T ss_pred CcCHHHHhc
Confidence 999998864
|
| >4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.85 E-value=3.4e-22 Score=213.52 Aligned_cols=201 Identities=19% Similarity=0.214 Sum_probs=143.6
Q ss_pred cCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc-----------------------
Q 042825 417 TNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK----------------------- 472 (631)
Q Consensus 417 t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~----------------------- 472 (631)
.+.|...+.||+|+||+||+|+.. +|+.||||++..... ....+.+.+|++++.+
T Consensus 8 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~l 86 (396)
T 4eut_A 8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISF-LRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVL 86 (396)
T ss_dssp SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGG-GSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEE
T ss_pred CCceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccc-cchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEE
Confidence 357889999999999999999976 489999999975432 2235678899998876
Q ss_pred -------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC----------------------------CCcEEEeecccc
Q 042825 473 -------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG----------------------------DDMRVADFGLVR 517 (631)
Q Consensus 473 -------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g----------------------------~~~kl~DFGla~ 517 (631)
|+|.+++... .....+++.....++.+++.| ..+||+|||+++
T Consensus 87 v~e~~~~g~L~~~l~~~--~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~ 164 (396)
T 4eut_A 87 IMEFCPCGSLYTVLEEP--SNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAR 164 (396)
T ss_dssp EECCCTTEEHHHHTTSG--GGTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEECTTSCEEEEECCGGGCE
T ss_pred EEecCCCCCHHHHHHhh--hcccCCCHHHHHHHHHHHHHHHHHHHHCCEEECCcCHHHEEEeecCCCceeEEEecCCCce
Confidence 3444444321 112238899999998888776 126899999998
Q ss_pred ccCCCCccccccccccCccccccccccc--------CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHhH
Q 042825 518 LVPENGKHSILTKVAGTFGYLAPEYIVT--------GRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQ 589 (631)
Q Consensus 518 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~--------~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~~ 589 (631)
..... .......||..|+|||++.+ ..++.++|||||||++|||++|+.||............+.....
T Consensus 165 ~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~ 241 (396)
T 4eut_A 165 ELEDD---EQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIIT 241 (396)
T ss_dssp ECCCG---GGSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHHH
T ss_pred EccCC---CccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHhc
Confidence 76422 22345679999999999865 56888999999999999999999999753322111111222111
Q ss_pred hhh-----------------------------cCChhHHHHHHhhcCCChhhHHhHHHHHHHH
Q 042825 590 KMH-----------------------------KNHDTFQMAIDKTIQLDEENLANVSTVAELG 623 (631)
Q Consensus 590 ~~~-----------------------------~~~~~l~~~id~~L~~d~~~r~~~~~vl~la 623 (631)
... .....+.+++.++|..||++|+++.++++-.
T Consensus 242 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l 304 (396)
T 4eut_A 242 GKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAET 304 (396)
T ss_dssp SCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHH
T ss_pred CCCcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHH
Confidence 100 0113578999999999999999999887654
|
| >3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=6.6e-21 Score=197.19 Aligned_cols=198 Identities=20% Similarity=0.286 Sum_probs=144.9
Q ss_pred cccceeecCCCceEEEEEEec-----CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc----------------------
Q 042825 420 FSEENRLGRGGVGTVYKGELK-----DGTEVGVKRMELGSVTEQGIAQFESEITVLTK---------------------- 472 (631)
Q Consensus 420 f~~~~~iG~G~fg~Vyk~~~~-----~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~---------------------- 472 (631)
|...+.||+|+||+||++.+. +++.||||++.... .....+.+.+|++++.+
T Consensus 33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 111 (318)
T 3lxp_A 33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADA-GPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQ 111 (318)
T ss_dssp EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTC-CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEE
T ss_pred HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEecccc-ChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEE
Confidence 488899999999999998753 58899999997653 44567789999999876
Q ss_pred --------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccC
Q 042825 473 --------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVP 520 (631)
Q Consensus 473 --------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~ 520 (631)
|+|.+++.. ..+++.....++.+++.+ +.+||+|||+++...
T Consensus 112 lv~e~~~~~~L~~~l~~------~~~~~~~~~~i~~~l~~~l~~LH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~ 185 (318)
T 3lxp_A 112 LVMEYVPLGSLRDYLPR------HSIGLAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVP 185 (318)
T ss_dssp EEECCCTTCBHHHHGGG------SCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCGGGCEECC
T ss_pred EEEecccCCcHHHHHhh------CCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEEcCCCCEEECCcccccccc
Confidence 355555421 248889999998888776 457999999998875
Q ss_pred CCCcc-ccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCC----------hHHHHHHHHHhH
Q 042825 521 ENGKH-SILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSD----------PEYIIHLATWFQ 589 (631)
Q Consensus 521 ~~~~~-~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~----------~~~~~~l~~~~~ 589 (631)
..... .......||..|+|||++.+..++.++|||||||++|||+||+.||...... ......+.....
T Consensus 186 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (318)
T 3lxp_A 186 EGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLE 265 (318)
T ss_dssp TTCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHHHH
T ss_pred ccccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHHHHh
Confidence 33221 2234456889999999999889999999999999999999999999742110 000011111111
Q ss_pred hh------hcCChhHHHHHHhhcCCChhhHHhHHHHHHHHH
Q 042825 590 KM------HKNHDTFQMAIDKTIQLDEENLANVSTVAELGD 624 (631)
Q Consensus 590 ~~------~~~~~~l~~~id~~L~~d~~~r~~~~~vl~lal 624 (631)
.. ...+.++.+++..|+..||.+|+++.++++...
T Consensus 266 ~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~ 306 (318)
T 3lxp_A 266 RGERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILK 306 (318)
T ss_dssp TTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred cccCCCCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHH
Confidence 11 112467999999999999999999999887543
|
| >1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=1e-21 Score=199.31 Aligned_cols=195 Identities=16% Similarity=0.218 Sum_probs=146.8
Q ss_pred hcCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc----------------------
Q 042825 416 ATNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK---------------------- 472 (631)
Q Consensus 416 ~t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~---------------------- 472 (631)
..++|...+.||+|+||+||+|+.. +++.||||++...........++.+|+..+.+
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~l 88 (289)
T 1x8b_A 9 YTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLI 88 (289)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEE
T ss_pred ccchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEE
Confidence 4567999999999999999999976 69999999998765545566778888877754
Q ss_pred -------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC---------------------C------------------
Q 042825 473 -------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG---------------------D------------------ 506 (631)
Q Consensus 473 -------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g---------------------~------------------ 506 (631)
|+|.+++..... ....+++.....|+.+++.| .
T Consensus 89 v~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~~ 167 (289)
T 1x8b_A 89 QNEYCNGGSLADAISENYR-IMSYFKEAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWA 167 (289)
T ss_dssp EEECCTTCBHHHHHHHHHH-HTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC------------------
T ss_pred EEEecCCCcHHHHHHhhcc-cccCCCHHHHHHHHHHHHHHHHHHHhCCEeecCCCHHHEEEcCCCCCccccccccccccc
Confidence 578777754221 22468888999999888876 1
Q ss_pred ----CcEEEeeccccccCCCCccccccccccCcccccccccccC-CCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHH
Q 042825 507 ----DMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTG-RITAKVDVYSFGMILMDLITGRKVVDATHSDPEYI 581 (631)
Q Consensus 507 ----~~kl~DFGla~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~ 581 (631)
.+||+|||+++..... ....||..|+|||.+.+. .++.++|||||||++|||++|+.|+... . ..
T Consensus 168 ~~~~~~kl~Dfg~~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~---~-~~ 237 (289)
T 1x8b_A 168 SNKVMFKIGDLGHVTRISSP------QVEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNG---D-QW 237 (289)
T ss_dssp --CCCEEECCCTTCEETTCS------CCCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSS---H-HH
T ss_pred CCceEEEEcccccccccCCc------cccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcch---h-HH
Confidence 4789999999876421 234599999999999766 5678999999999999999999877532 1 11
Q ss_pred HHHHHH-hHh-hhcCChhHHHHHHhhcCCChhhHHhHHHHHH
Q 042825 582 IHLATW-FQK-MHKNHDTFQMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 582 ~~l~~~-~~~-~~~~~~~l~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
..+..- ... ....++++.+++.+||..||.+|+++.++++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 279 (289)
T 1x8b_A 238 HEIRQGRLPRIPQVLSQEFTELLKVMIHPDPERRPSAMALVK 279 (289)
T ss_dssp HHHHTTCCCCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HHHHcCCCCCCCcccCHHHHHHHHHHhCCCcccCCCHHHHhh
Confidence 111111 101 1123578999999999999999999998875
|
| >3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ... | Back alignment and structure |
|---|
Probab=99.85 E-value=1.6e-21 Score=205.41 Aligned_cols=195 Identities=21% Similarity=0.337 Sum_probs=143.0
Q ss_pred cCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc-----------------------
Q 042825 417 TNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK----------------------- 472 (631)
Q Consensus 417 t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~----------------------- 472 (631)
.++|...+.||+|+||+||+|+.. +++.||+|++.... .....+.+.+|++++.+
T Consensus 32 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 110 (360)
T 3eqc_A 32 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEI-KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICM 110 (360)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCC-CHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEE
T ss_pred cccceeeeeecCCCCeEEEEEEECCCCcEEEEEEecccc-CHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEE
Confidence 357899999999999999999976 58999999997653 44566789999998876
Q ss_pred -----CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC-------------------------CCcEEEeeccccccCCC
Q 042825 473 -----GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG-------------------------DDMRVADFGLVRLVPEN 522 (631)
Q Consensus 473 -----gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g-------------------------~~~kl~DFGla~~~~~~ 522 (631)
|+|.+++... ..+++.....|+.+++.| +.+||+|||+++....
T Consensus 111 e~~~~~~L~~~l~~~-----~~~~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~- 184 (360)
T 3eqc_A 111 EHMDGGSLDQVLKKA-----GRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID- 184 (360)
T ss_dssp CCCTTCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHH-
T ss_pred ECCCCCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHhCCEEcCCccHHHEEECCCCCEEEEECCCCccccc-
Confidence 5676666431 246777777776665543 5678999999976531
Q ss_pred CccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHH--------------------
Q 042825 523 GKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYII-------------------- 582 (631)
Q Consensus 523 ~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~-------------------- 582 (631)
.......||+.|+|||++.+..++.++|||||||++|||++|+.||...........
T Consensus 185 ---~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (360)
T 3eqc_A 185 ---SMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPG 261 (360)
T ss_dssp ---HC----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC------------------
T ss_pred ---ccccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCC
Confidence 123446799999999999999999999999999999999999999975432111000
Q ss_pred -----------------HHHHHhHhh-------hcCChhHHHHHHhhcCCChhhHHhHHHHHH
Q 042825 583 -----------------HLATWFQKM-------HKNHDTFQMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 583 -----------------~l~~~~~~~-------~~~~~~l~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
....+.... ...+.++.+++.+||..||.+|+++.++++
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 324 (360)
T 3eqc_A 262 RPLNKFGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMV 324 (360)
T ss_dssp ------------CCCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred CcccccccCCCCcccchhhhhHHhccCCCCCCcccccHHHHHHHHHHhhcChhhCCCHHHHhh
Confidence 000111000 012457899999999999999999999875
|
| >3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.85 E-value=1.9e-21 Score=200.47 Aligned_cols=196 Identities=21% Similarity=0.323 Sum_probs=141.1
Q ss_pred hhcCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc---------------------
Q 042825 415 NATNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK--------------------- 472 (631)
Q Consensus 415 ~~t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~--------------------- 472 (631)
...+.|+..+.||+|+||.||+|+.. +|+.||||++.... ..+++.+|++++.+
T Consensus 26 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 101 (314)
T 3com_A 26 QPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES----DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWI 101 (314)
T ss_dssp ----CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS----CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEE
T ss_pred cchhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH----HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEE
Confidence 34568999999999999999999976 48999999997643 23568889998876
Q ss_pred -------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCC
Q 042825 473 -------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPE 521 (631)
Q Consensus 473 -------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~ 521 (631)
++|.+++.. ....+++.....++.+++.| +.+||+|||+++....
T Consensus 102 v~e~~~~~~L~~~~~~----~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~ 177 (314)
T 3com_A 102 VMEYCGAGSVSDIIRL----RNKTLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTD 177 (314)
T ss_dssp EEECCTTEEHHHHHHH----HTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECBT
T ss_pred EeecCCCCCHHHHHHh----cCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCcCHHHEEECCCCCEEEeecccchhhhh
Confidence 355555531 23468888888888887765 5688999999987642
Q ss_pred CCccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHhH----hhhcCChh
Q 042825 522 NGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQ----KMHKNHDT 597 (631)
Q Consensus 522 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~~----~~~~~~~~ 597 (631)
. ........||..|+|||.+.+..++.++|||||||++|||++|+.||....... ....+..... .....++.
T Consensus 178 ~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 254 (314)
T 3com_A 178 T--MAKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMR-AIFMIPTNPPPTFRKPELWSDN 254 (314)
T ss_dssp T--BSCBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHH-HHHHHHHSCCCCCSSGGGSCHH
T ss_pred h--ccccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHhcCCCcccCCcccCCHH
Confidence 2 122345679999999999998899999999999999999999999998543211 1111111100 01112467
Q ss_pred HHHHHHhhcCCChhhHHhHHHHHH
Q 042825 598 FQMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 598 l~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
+.+++.+|+..||.+|+++.++++
T Consensus 255 l~~li~~~l~~dp~~Rpt~~~ll~ 278 (314)
T 3com_A 255 FTDFVKQCLVKSPEQRATATQLLQ 278 (314)
T ss_dssp HHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred HHHHHHHHccCChhhCcCHHHHHh
Confidence 899999999999999999998875
|
| >2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.85 E-value=5.1e-21 Score=197.43 Aligned_cols=197 Identities=19% Similarity=0.291 Sum_probs=137.0
Q ss_pred cCCcccceeecCCCceEEEEEEecC-CcEEEEEEEecCCCCHHHHHHHHHHHHHHhcC----------------------
Q 042825 417 TNNFSEENRLGRGGVGTVYKGELKD-GTEVGVKRMELGSVTEQGIAQFESEITVLTKG---------------------- 473 (631)
Q Consensus 417 t~~f~~~~~iG~G~fg~Vyk~~~~~-g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~g---------------------- 473 (631)
.++|...+.||+|+||.||+|+... |+.||||++... .....+++.+|++++.+-
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 87 (320)
T 2i6l_A 10 GSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLT--DPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDD 87 (320)
T ss_dssp TTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECC--SHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC-
T ss_pred CCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecC--ChHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccc
Confidence 4678999999999999999999764 899999999754 345667899999998761
Q ss_pred -------------------ChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC-------------------------CCcE
Q 042825 474 -------------------TLGRHLFNWEEEGLEPLEWNTRLNIALDVARG-------------------------DDMR 509 (631)
Q Consensus 474 -------------------sL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g-------------------------~~~k 509 (631)
+|.+++ . ...+.+.....++.+++.| ..+|
T Consensus 88 ~~~~~~~~~~~lv~e~~~~~L~~~~----~--~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~k 161 (320)
T 2i6l_A 88 VGSLTELNSVYIVQEYMETDLANVL----E--QGPLLEEHARLFMYQLLRGLKYIHSANVLHRDLKPANLFINTEDLVLK 161 (320)
T ss_dssp ---CCSCSEEEEEEECCSEEHHHHH----T--TCCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTTTEEE
T ss_pred cccccccCceeEEeeccCCCHHHHh----h--cCCccHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCeEE
Confidence 111111 1 2357888888888887765 3578
Q ss_pred EEeeccccccCCCCc-cccccccccCccccccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHH
Q 042825 510 VADFGLVRLVPENGK-HSILTKVAGTFGYLAPEYIVT-GRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATW 587 (631)
Q Consensus 510 l~DFGla~~~~~~~~-~~~~~~~~gt~~Y~aPE~~~~-~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~ 587 (631)
|+|||+++....... ........+|..|+|||.+.. ..++.++|||||||++|||++|+.||.+..... ....+...
T Consensus 162 l~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~-~~~~~~~~ 240 (320)
T 2i6l_A 162 IGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELE-QMQLILES 240 (320)
T ss_dssp ECCCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHH
T ss_pred EccCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHh
Confidence 999999987642211 112234567999999998865 679999999999999999999999998654221 11111110
Q ss_pred h-------------------------------HhhhcCChhHHHHHHhhcCCChhhHHhHHHHHHH
Q 042825 588 F-------------------------------QKMHKNHDTFQMAIDKTIQLDEENLANVSTVAEL 622 (631)
Q Consensus 588 ~-------------------------------~~~~~~~~~l~~~id~~L~~d~~~r~~~~~vl~l 622 (631)
. ......+.++.+++.++|..||.+|+++.++++-
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 306 (320)
T 2i6l_A 241 IPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSH 306 (320)
T ss_dssp SCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred cCCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhCC
Confidence 0 0001235789999999999999999999998763
|
| >2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.85 E-value=3.6e-21 Score=196.42 Aligned_cols=198 Identities=18% Similarity=0.254 Sum_probs=139.1
Q ss_pred CCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc------------------------
Q 042825 418 NNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK------------------------ 472 (631)
Q Consensus 418 ~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~------------------------ 472 (631)
++|....+||+|+||.||+|+.. +++.||||++.... ....+.+.+|+.++.+
T Consensus 22 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 99 (295)
T 2clq_A 22 DENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERD--SRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFME 99 (295)
T ss_dssp CTTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCC--C---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred cCCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCc--hHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEE
Confidence 34556679999999999999965 58899999997653 2345778899998876
Q ss_pred ----CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC-------------------------CCcEEEeeccccccCCCC
Q 042825 473 ----GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG-------------------------DDMRVADFGLVRLVPENG 523 (631)
Q Consensus 473 ----gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g-------------------------~~~kl~DFGla~~~~~~~ 523 (631)
++|.+++... .....+.+.....++.+++.| +.+||+|||+++.....
T Consensus 100 ~~~~~~L~~~l~~~--~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~- 176 (295)
T 2clq_A 100 QVPGGSLSALLRSK--WGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGI- 176 (295)
T ss_dssp CCSEEEHHHHHHHT--TCCCTTCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTCCEEECCTTTCEESCC--
T ss_pred eCCCCCHHHHHHhh--ccCCCccHHHHHHHHHHHHHHHHHHHhCCEEccCCChhhEEEECCCCCEEEeecccccccCCC-
Confidence 4566555421 122345677777777777654 46789999999876421
Q ss_pred ccccccccccCcccccccccccCC--CCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHh--Hh-hhcCChhH
Q 042825 524 KHSILTKVAGTFGYLAPEYIVTGR--ITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWF--QK-MHKNHDTF 598 (631)
Q Consensus 524 ~~~~~~~~~gt~~Y~aPE~~~~~~--~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~--~~-~~~~~~~l 598 (631)
........||+.|+|||++.+.. ++.++|||||||++|||++|+.||................. .. ....++++
T Consensus 177 -~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (295)
T 2clq_A 177 -NPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPEIPESMSAEA 255 (295)
T ss_dssp -----CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHHHHHHHHCCCCCCCTTSCHHH
T ss_pred -CCcccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHHHhhccccccccccccCCHHH
Confidence 12234567999999999987643 89999999999999999999999975433211111111100 00 11224688
Q ss_pred HHHHHhhcCCChhhHHhHHHHHH
Q 042825 599 QMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 599 ~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
.+++.+|+..||++|+++.++++
T Consensus 256 ~~li~~~l~~dp~~Rps~~~ll~ 278 (295)
T 2clq_A 256 KAFILKCFEPDPDKRACANDLLV 278 (295)
T ss_dssp HHHHHHTTCSSTTTSCCHHHHHT
T ss_pred HHHHHHHccCChhhCCCHHHHhc
Confidence 99999999999999999998875
|
| >2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=2.1e-21 Score=201.13 Aligned_cols=198 Identities=20% Similarity=0.289 Sum_probs=141.1
Q ss_pred hcCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCC------HHHHHHHHHHHHHHhc----------------
Q 042825 416 ATNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVT------EQGIAQFESEITVLTK---------------- 472 (631)
Q Consensus 416 ~t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~------~~~~~~~~~Ei~~l~~---------------- 472 (631)
..++|...+.||+|+||.||+|+.. +++.||||++...... ......+.+|++++.+
T Consensus 8 l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~ 87 (322)
T 2ycf_A 8 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAE 87 (322)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESS
T ss_pred hhhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCC
Confidence 3457999999999999999999976 5899999999754321 1223458889998876
Q ss_pred -----------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------C---CcEEEeec
Q 042825 473 -----------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------D---DMRVADFG 514 (631)
Q Consensus 473 -----------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~---~~kl~DFG 514 (631)
++|.+++. ....+++.....++.+++.| + .+||+|||
T Consensus 88 ~~~lv~e~~~~~~L~~~~~-----~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg 162 (322)
T 2ycf_A 88 DYYIVLELMEGGELFDKVV-----GNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFG 162 (322)
T ss_dssp SEEEEEECCTTEETHHHHS-----TTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSSSCCEEECCCT
T ss_pred ceEEEEecCCCCcHHHHHh-----ccCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEecCCCCCeEEEccCc
Confidence 34444332 23467888888888887765 1 28999999
Q ss_pred cccccCCCCccccccccccCcccccccccc---cCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHH----
Q 042825 515 LVRLVPENGKHSILTKVAGTFGYLAPEYIV---TGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATW---- 587 (631)
Q Consensus 515 la~~~~~~~~~~~~~~~~gt~~Y~aPE~~~---~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~---- 587 (631)
+++..... .......||+.|+|||++. ...++.++|||||||++|||++|+.||............+..-
T Consensus 163 ~~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~ 239 (322)
T 2ycf_A 163 HSKILGET---SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNF 239 (322)
T ss_dssp TCEECCCC---HHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSSCHHHHHHHTCCCC
T ss_pred cceecccc---cccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHHHHHHHHHhCcccc
Confidence 99876421 2233467999999999974 4568999999999999999999999997654332111112110
Q ss_pred hHh-hhcCChhHHHHHHhhcCCChhhHHhHHHHHH
Q 042825 588 FQK-MHKNHDTFQMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 588 ~~~-~~~~~~~l~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
... ....++++.+++.+||..||.+|+++.++++
T Consensus 240 ~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~ 274 (322)
T 2ycf_A 240 IPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALR 274 (322)
T ss_dssp CHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred CchhhhhcCHHHHHHHHHHcccCHhhCCCHHHHhh
Confidence 011 1223578999999999999999999998875
|
| >3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=1.4e-21 Score=203.05 Aligned_cols=202 Identities=20% Similarity=0.286 Sum_probs=149.1
Q ss_pred CCcccceeecCCCceEEEEEEe-----cCCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc--------------------
Q 042825 418 NNFSEENRLGRGGVGTVYKGEL-----KDGTEVGVKRMELGSVTEQGIAQFESEITVLTK-------------------- 472 (631)
Q Consensus 418 ~~f~~~~~iG~G~fg~Vyk~~~-----~~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~-------------------- 472 (631)
++|+..+.||+|+||.||+|++ .+++.||||++... .....+.+.+|++++.+
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 100 (327)
T 3lxl_A 23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHS--GPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQS 100 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSC--CHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCE
T ss_pred hhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccC--CHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCce
Confidence 5788999999999999999984 35889999999754 34556779999999876
Q ss_pred ----------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccc
Q 042825 473 ----------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRL 518 (631)
Q Consensus 473 ----------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~ 518 (631)
++|.+++... ...+++.....|+.+++.+ +.+||+|||+++.
T Consensus 101 ~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~ 176 (327)
T 3lxl_A 101 LRLVMEYLPSGCLRDFLQRH----RARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKL 176 (327)
T ss_dssp EEEEEECCTTCBHHHHHHHH----GGGCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCGGGCEE
T ss_pred EEEEEeecCCCCHHHHHHhc----ccCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChhhEEECCCCCEEEccccccee
Confidence 5566665431 2358899999998888776 4578999999987
Q ss_pred cCCCCcc-ccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChH----------HHHHHHHH
Q 042825 519 VPENGKH-SILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPE----------YIIHLATW 587 (631)
Q Consensus 519 ~~~~~~~-~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~----------~~~~l~~~ 587 (631)
....... .......||..|+|||++.+..++.++|||||||++|||++|+.||........ ....+...
T Consensus 177 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (327)
T 3lxl_A 177 LPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLEL 256 (327)
T ss_dssp CCTTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHHHHH
T ss_pred cccCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHHHHH
Confidence 7433221 223345688999999999988899999999999999999999999864211000 00111111
Q ss_pred hHhh------hcCChhHHHHHHhhcCCChhhHHhHHHHHHHHHh
Q 042825 588 FQKM------HKNHDTFQMAIDKTIQLDEENLANVSTVAELGDH 625 (631)
Q Consensus 588 ~~~~------~~~~~~l~~~id~~L~~d~~~r~~~~~vl~lal~ 625 (631)
.... ...++++.+++.+|+..||.+|+++.++++..-.
T Consensus 257 ~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~ 300 (327)
T 3lxl_A 257 LEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDM 300 (327)
T ss_dssp HHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred hhcccCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence 1111 1224679999999999999999999999876443
|
| >3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=1.5e-21 Score=202.71 Aligned_cols=198 Identities=21% Similarity=0.272 Sum_probs=122.4
Q ss_pred cCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc-----------------------
Q 042825 417 TNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK----------------------- 472 (631)
Q Consensus 417 t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~----------------------- 472 (631)
.++|...+.||+|+||.||+|+.. +|+.||||++.... ......++..|+..+.+
T Consensus 21 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv 99 (327)
T 3aln_A 21 AEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTV-DEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWIC 99 (327)
T ss_dssp SCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCC-CHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEE
T ss_pred HHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeeccc-CchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEE
Confidence 367888999999999999999975 68999999998653 33445667777764332
Q ss_pred -----CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC-------------------------CCcEEEeeccccccCCC
Q 042825 473 -----GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG-------------------------DDMRVADFGLVRLVPEN 522 (631)
Q Consensus 473 -----gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g-------------------------~~~kl~DFGla~~~~~~ 522 (631)
|++.+++..........+++.....++.+++.| +.+||+|||+++.....
T Consensus 100 ~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~ 179 (327)
T 3aln_A 100 MELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDS 179 (327)
T ss_dssp ECCCSEEHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHSCCCSCCCGGGEEEETTTEEEECCCSSSCC----
T ss_pred EeecCCChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccCCEeECCCCHHHEEEcCCCCEEEccCCCceecccc
Confidence 444444432222234567888888887776654 45789999999876422
Q ss_pred CccccccccccCccccccccc----ccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHhHh----h---
Q 042825 523 GKHSILTKVAGTFGYLAPEYI----VTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQK----M--- 591 (631)
Q Consensus 523 ~~~~~~~~~~gt~~Y~aPE~~----~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~~~----~--- 591 (631)
. ......||..|+|||++ .+..++.++|||||||++|||++|+.||....... ..+...... .
T Consensus 180 ~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~---~~~~~~~~~~~~~~~~~ 253 (327)
T 3aln_A 180 I---AKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVF---DQLTQVVKGDPPQLSNS 253 (327)
T ss_dssp -----------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC----------CCCCCSCCCCCCCC
T ss_pred c---ccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHH---HHHHHHhcCCCCCCCCc
Confidence 1 22344799999999998 45668999999999999999999999997543211 111111100 0
Q ss_pred --hcCChhHHHHHHhhcCCChhhHHhHHHHHH
Q 042825 592 --HKNHDTFQMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 592 --~~~~~~l~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
...+.++.+++..|+..||.+|+++.++++
T Consensus 254 ~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 285 (327)
T 3aln_A 254 EEREFSPSFINFVNLCLTKDESKRPKYKELLK 285 (327)
T ss_dssp SSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred ccccCCHHHHHHHHHHhhCChhhCcCHHHHHh
Confidence 113467999999999999999999998865
|
| >2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A | Back alignment and structure |
|---|
Probab=99.85 E-value=3.1e-21 Score=199.08 Aligned_cols=199 Identities=20% Similarity=0.218 Sum_probs=138.3
Q ss_pred cCCcccc-eeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc----------------------
Q 042825 417 TNNFSEE-NRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK---------------------- 472 (631)
Q Consensus 417 t~~f~~~-~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~---------------------- 472 (631)
.+.|... +.||+|+||+||+|+.. +++.||||++..... ...+++.+|++++.+
T Consensus 11 ~~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~l 88 (316)
T 2ac3_A 11 EDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPG--HIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYL 88 (316)
T ss_dssp TTSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSS--CCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEE
T ss_pred ceeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcc--hhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEE
Confidence 4567764 78999999999999955 689999999976532 235678899988754
Q ss_pred -------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------C---CcEEEeeccccc
Q 042825 473 -------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------D---DMRVADFGLVRL 518 (631)
Q Consensus 473 -------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~---~~kl~DFGla~~ 518 (631)
|+|.+++.. ...+++.....++.+++.| + .+||+|||+++.
T Consensus 89 v~e~~~~~~L~~~l~~-----~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~ 163 (316)
T 2ac3_A 89 VFEKMRGGSILSHIHK-----RRHFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSG 163 (316)
T ss_dssp EEECCTTCBHHHHHHH-----HSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESCSSSSCSEEECCTTCCC-
T ss_pred EEEcCCCCcHHHHHhc-----cCCCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEEccCCCcCceEEEEccCccc
Confidence 556665542 1357888888888888765 2 279999999986
Q ss_pred cCCCCc-----cccccccccCccccccccccc-----CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCh----------
Q 042825 519 VPENGK-----HSILTKVAGTFGYLAPEYIVT-----GRITAKVDVYSFGMILMDLITGRKVVDATHSDP---------- 578 (631)
Q Consensus 519 ~~~~~~-----~~~~~~~~gt~~Y~aPE~~~~-----~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~---------- 578 (631)
...... ........||+.|+|||++.. ..++.++|||||||++|||++|+.||.......
T Consensus 164 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~ 243 (316)
T 2ac3_A 164 IKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACP 243 (316)
T ss_dssp ------------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCH
T ss_pred cccCCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccch
Confidence 532211 111234569999999999875 458999999999999999999999997653221
Q ss_pred HHHHHHHHHhHh---------hhcCChhHHHHHHhhcCCChhhHHhHHHHHHH
Q 042825 579 EYIIHLATWFQK---------MHKNHDTFQMAIDKTIQLDEENLANVSTVAEL 622 (631)
Q Consensus 579 ~~~~~l~~~~~~---------~~~~~~~l~~~id~~L~~d~~~r~~~~~vl~l 622 (631)
.....+...... ....+.++.+++.+||..||.+|+++.++++-
T Consensus 244 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h 296 (316)
T 2ac3_A 244 ACQNMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQH 296 (316)
T ss_dssp HHHHHHHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred hHHHHHHHHHhccCcccCchhcccCCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence 000111111110 01235678999999999999999999998763
|
| >2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A | Back alignment and structure |
|---|
Probab=99.85 E-value=1.6e-21 Score=200.21 Aligned_cols=194 Identities=19% Similarity=0.271 Sum_probs=142.0
Q ss_pred cCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc-----------------------
Q 042825 417 TNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK----------------------- 472 (631)
Q Consensus 417 t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~----------------------- 472 (631)
.++|...+.||+|+||.||+|+.. +|+.||||++..... ...+.+.+|++++.+
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 85 (304)
T 2jam_A 8 RKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPA--FRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVM 85 (304)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC--------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccc--cchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEE
Confidence 457889999999999999999976 689999999986432 234568899988876
Q ss_pred -----CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC---------------------------CCcEEEeeccccccC
Q 042825 473 -----GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG---------------------------DDMRVADFGLVRLVP 520 (631)
Q Consensus 473 -----gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g---------------------------~~~kl~DFGla~~~~ 520 (631)
++|.+++.. ...+++.....++.+++.| ..+||+|||+++...
T Consensus 86 e~~~~~~L~~~l~~-----~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~ 160 (304)
T 2jam_A 86 QLVSGGELFDRILE-----RGVYTEKDASLVIQQVLSAVKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQ 160 (304)
T ss_dssp CCCCSCBHHHHHHH-----HSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCC
T ss_pred EcCCCccHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEecCCCCCCEEEccCCcceecC
Confidence 466665532 1347777777787777654 357899999998653
Q ss_pred CCCccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHh-H---h-hhcCC
Q 042825 521 ENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWF-Q---K-MHKNH 595 (631)
Q Consensus 521 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~-~---~-~~~~~ 595 (631)
.. ......||+.|+|||++.+..++.++||||+||++|||++|+.||....... ....+.... . . ....+
T Consensus 161 ~~----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-~~~~i~~~~~~~~~~~~~~~~ 235 (304)
T 2jam_A 161 NG----IMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESK-LFEKIKEGYYEFESPFWDDIS 235 (304)
T ss_dssp CB----TTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHHH-HHHHHHHCCCCCCTTTTTTSC
T ss_pred CC----ccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHH-HHHHHHcCCCCCCccccccCC
Confidence 11 2234569999999999998899999999999999999999999997643211 111111110 0 0 01234
Q ss_pred hhHHHHHHhhcCCChhhHHhHHHHHHH
Q 042825 596 DTFQMAIDKTIQLDEENLANVSTVAEL 622 (631)
Q Consensus 596 ~~l~~~id~~L~~d~~~r~~~~~vl~l 622 (631)
+++.+++.++|..||.+|+++.++++-
T Consensus 236 ~~~~~li~~~l~~dp~~Rps~~~~l~h 262 (304)
T 2jam_A 236 ESAKDFICHLLEKDPNERYTCEKALSH 262 (304)
T ss_dssp HHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred HHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 689999999999999999999998763
|
| >4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=4.5e-21 Score=196.50 Aligned_cols=202 Identities=20% Similarity=0.322 Sum_probs=145.5
Q ss_pred CCcccceeecCCCceEEEEEEe-----cCCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc--------------------
Q 042825 418 NNFSEENRLGRGGVGTVYKGEL-----KDGTEVGVKRMELGSVTEQGIAQFESEITVLTK-------------------- 472 (631)
Q Consensus 418 ~~f~~~~~iG~G~fg~Vyk~~~-----~~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~-------------------- 472 (631)
+.|+..+.||+|+||.||+|++ .+++.||||++.... .....+++.+|++++.+
T Consensus 21 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 99 (302)
T 4e5w_A 21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPES-GGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNG 99 (302)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC------CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CC
T ss_pred hhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccc-cchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCce
Confidence 4588899999999999999984 358899999997543 22345778999999876
Q ss_pred ----------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccc
Q 042825 473 ----------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRL 518 (631)
Q Consensus 473 ----------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~ 518 (631)
|+|.+++.. ....+++.....++.+++.+ +.+||+|||+++.
T Consensus 100 ~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~ 175 (302)
T 4e5w_A 100 IKLIMEFLPSGSLKEYLPK----NKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKA 175 (302)
T ss_dssp EEEEEECCTTCBHHHHHHH----HTTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCTTCEE
T ss_pred EEEEEEeCCCCcHHHHHHh----ccccCCHHHHHHHHHHHHHHHHHhhcCCcccCCCchheEEEcCCCCEEECccccccc
Confidence 466666532 22458888888888888776 4578999999987
Q ss_pred cCCCCcc-ccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCC----------CChHHHHHHHHH
Q 042825 519 VPENGKH-SILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATH----------SDPEYIIHLATW 587 (631)
Q Consensus 519 ~~~~~~~-~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~----------~~~~~~~~l~~~ 587 (631)
....... .......||..|+|||++.+..++.++||||+||++|||+||+.|+.... ........+...
T Consensus 176 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (302)
T 4e5w_A 176 IETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNT 255 (302)
T ss_dssp CCTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHHHH
T ss_pred ccCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHHHHH
Confidence 7533221 22345678899999999999899999999999999999999999864211 000011111111
Q ss_pred hHhh------hcCChhHHHHHHhhcCCChhhHHhHHHHHHHHH
Q 042825 588 FQKM------HKNHDTFQMAIDKTIQLDEENLANVSTVAELGD 624 (631)
Q Consensus 588 ~~~~------~~~~~~l~~~id~~L~~d~~~r~~~~~vl~lal 624 (631)
.... ...++++.+++.+|+..||.+|+++.++++..-
T Consensus 256 ~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~ 298 (302)
T 4e5w_A 256 LKEGKRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFE 298 (302)
T ss_dssp HHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHH
T ss_pred HhccCCCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHH
Confidence 1110 122468999999999999999999999887543
|
| >2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=1.3e-21 Score=199.19 Aligned_cols=198 Identities=22% Similarity=0.282 Sum_probs=147.0
Q ss_pred hhcCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc---------------------
Q 042825 415 NATNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK--------------------- 472 (631)
Q Consensus 415 ~~t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~--------------------- 472 (631)
...++|...+.||+|+||.||+|+.. +++.||||++..........+.+.+|++++.+
T Consensus 19 ~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 98 (287)
T 2wei_A 19 TFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYI 98 (287)
T ss_dssp HHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred HHhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEE
Confidence 34568999999999999999999976 68999999997654434456788999999876
Q ss_pred -------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC---------------------------CCcEEEeeccccc
Q 042825 473 -------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG---------------------------DDMRVADFGLVRL 518 (631)
Q Consensus 473 -------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g---------------------------~~~kl~DFGla~~ 518 (631)
++|.+++.. ...+++.....++.+++.+ ..+||+|||+++.
T Consensus 99 v~e~~~~~~L~~~l~~-----~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~ 173 (287)
T 2wei_A 99 VGELYTGGELFDEIIK-----RKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTC 173 (287)
T ss_dssp EECCCCSCBHHHHHHH-----HSSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECSTTGGGT
T ss_pred EEEccCCCCHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCChhhEEEecCCCcccEEEeccCccee
Confidence 455555432 1357888888888888765 2478999999987
Q ss_pred cCCCCccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHh-----Hhhhc
Q 042825 519 VPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWF-----QKMHK 593 (631)
Q Consensus 519 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~-----~~~~~ 593 (631)
..... ......||+.|+|||.+.+ .++.++||||||+++|||++|+.||....... ....+.... .....
T Consensus 174 ~~~~~---~~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 248 (287)
T 2wei_A 174 FQQNT---KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYD-ILKRVETGKYAFDLPQWRT 248 (287)
T ss_dssp BCCCS---SCSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHCCCCCCSGGGTT
T ss_pred ecCCC---ccccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCCHHH-HHHHHHcCCCCCCchhhhh
Confidence 64221 1234468999999998865 58999999999999999999999998643211 111111100 00112
Q ss_pred CChhHHHHHHhhcCCChhhHHhHHHHHHH
Q 042825 594 NHDTFQMAIDKTIQLDEENLANVSTVAEL 622 (631)
Q Consensus 594 ~~~~l~~~id~~L~~d~~~r~~~~~vl~l 622 (631)
.++++.+++.+|+..||.+|+++.++++-
T Consensus 249 ~~~~~~~li~~~l~~dp~~Rps~~ell~h 277 (287)
T 2wei_A 249 ISDDAKDLIRKMLTFHPSLRITATQCLEH 277 (287)
T ss_dssp SCHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred cCHHHHHHHHHHcccChhhCcCHHHHhcC
Confidence 35689999999999999999999998864
|
| >1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=1.2e-21 Score=198.36 Aligned_cols=193 Identities=21% Similarity=0.305 Sum_probs=137.3
Q ss_pred cCCcccceeecCCCceEEEEEEecCCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc------------------------
Q 042825 417 TNNFSEENRLGRGGVGTVYKGELKDGTEVGVKRMELGSVTEQGIAQFESEITVLTK------------------------ 472 (631)
Q Consensus 417 t~~f~~~~~iG~G~fg~Vyk~~~~~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~------------------------ 472 (631)
.++|+..+.||+|+||+||+|+.+ |+.||||++.... ..+++.+|++++.+
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~----~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~ 94 (278)
T 1byg_A 20 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA----TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVT 94 (278)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEET-TEEEEEEECCCCC------HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEE
T ss_pred hhhceEEeEEecCCCceEEEEEEc-CCEEEEEEecchh----HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEE
Confidence 467899999999999999999875 8899999987543 45678999999876
Q ss_pred -----CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCC
Q 042825 473 -----GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENG 523 (631)
Q Consensus 473 -----gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~ 523 (631)
|+|.+++.... ...+++.....++.+++.+ +.+||+|||+++.....
T Consensus 95 e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~- 170 (278)
T 1byg_A 95 EYMAKGSLVDYLRSRG---RSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST- 170 (278)
T ss_dssp CCCTTEEHHHHHHHHH---HHHCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTSCEEECCCCC--------
T ss_pred ecCCCCCHHHHHHhcc---cccCCHHHHHHHHHHHHHHHHHHHhCCccccCCCcceEEEeCCCcEEEeecccccccccc-
Confidence 35555553211 1236777788888777765 46789999999865321
Q ss_pred ccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChHHHHHHHHHhH--hhhcCChhHHH
Q 042825 524 KHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT-GRKVVDATHSDPEYIIHLATWFQ--KMHKNHDTFQM 600 (631)
Q Consensus 524 ~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~Ellt-G~~P~~~~~~~~~~~~~l~~~~~--~~~~~~~~l~~ 600 (631)
.....++..|+|||.+.+..++.++||||||+++|||+| |+.||........ ...+..... .....++.+.+
T Consensus 171 ----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~ 245 (278)
T 1byg_A 171 ----QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDV-VPRVEKGYKMDAPDGCPPAVYE 245 (278)
T ss_dssp ---------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGH-HHHHTTTCCCCCCTTCCHHHHH
T ss_pred ----ccCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHH-HHHHhcCCCCCCcccCCHHHHH
Confidence 223467889999999998899999999999999999998 9999986543321 111111100 01122468999
Q ss_pred HHHhhcCCChhhHHhHHHHHHHH
Q 042825 601 AIDKTIQLDEENLANVSTVAELG 623 (631)
Q Consensus 601 ~id~~L~~d~~~r~~~~~vl~la 623 (631)
++.+|+..||.+|+++.++++..
T Consensus 246 li~~~l~~~p~~Rps~~~l~~~L 268 (278)
T 1byg_A 246 VMKNCWHLDAAMRPSFLQLREQL 268 (278)
T ss_dssp HHHHHTCSSGGGSCCHHHHHHHH
T ss_pred HHHHHhcCChhhCCCHHHHHHHH
Confidence 99999999999999999988754
|
| >3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=3.4e-21 Score=201.07 Aligned_cols=197 Identities=16% Similarity=0.200 Sum_probs=122.3
Q ss_pred hcCCcccc-eeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc---------------------
Q 042825 416 ATNNFSEE-NRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK--------------------- 472 (631)
Q Consensus 416 ~t~~f~~~-~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~--------------------- 472 (631)
..++|... ++||+|+||+||+|+.. +|+.||||++... ....+++..+...+..
T Consensus 26 ~~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~ 102 (336)
T 3fhr_A 26 VTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDS---PKARQEVDHHWQASGGPHIVCILDVYENMHHGKRCLL 102 (336)
T ss_dssp GGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESS---HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred ccceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCc---HHHHHHHHHHHHhcCCCChHHHHHHHhhccCCCceEE
Confidence 45678885 46999999999999976 6999999999753 3334444444444433
Q ss_pred --------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC---------------------------CCcEEEeecccc
Q 042825 473 --------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG---------------------------DDMRVADFGLVR 517 (631)
Q Consensus 473 --------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g---------------------------~~~kl~DFGla~ 517 (631)
|+|.+++.. .....+++.....++.+++.| ..+||+|||+++
T Consensus 103 lv~e~~~gg~L~~~l~~---~~~~~l~~~~~~~i~~ql~~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~ 179 (336)
T 3fhr_A 103 IIMECMEGGELFSRIQE---RGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAK 179 (336)
T ss_dssp EEEECCTTEEHHHHHHT---C-CCCCBHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSTTCCEEECCCTTCE
T ss_pred EEEeccCCCCHHHHHHh---cCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEEecCCCceEEEeccccce
Confidence 466666642 223468999999999888876 237999999998
Q ss_pred ccCCCCccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHH---HHHHHHhH-----
Q 042825 518 LVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYI---IHLATWFQ----- 589 (631)
Q Consensus 518 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~---~~l~~~~~----- 589 (631)
..... ......||+.|+|||++.+..++.++|||||||++|||++|+.||.......... ..+.....
T Consensus 180 ~~~~~----~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (336)
T 3fhr_A 180 ETTQN----ALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNP 255 (336)
T ss_dssp EC--------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC---------------------CCCTT
T ss_pred ecccc----ccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhhHHHhhhccccccCch
Confidence 76421 2334678999999999988889999999999999999999999997543321100 00000000
Q ss_pred hhhcCChhHHHHHHhhcCCChhhHHhHHHHHHH
Q 042825 590 KMHKNHDTFQMAIDKTIQLDEENLANVSTVAEL 622 (631)
Q Consensus 590 ~~~~~~~~l~~~id~~L~~d~~~r~~~~~vl~l 622 (631)
.....++++.+++.+||..||.+|+++.++++-
T Consensus 256 ~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 288 (336)
T 3fhr_A 256 EWSEVSEDAKQLIRLLLKTDPTERLTITQFMNH 288 (336)
T ss_dssp TSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred hhccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 001235689999999999999999999998863
|
| >3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... | Back alignment and structure |
|---|
Probab=99.85 E-value=4.6e-22 Score=206.12 Aligned_cols=194 Identities=20% Similarity=0.296 Sum_probs=140.0
Q ss_pred HHhhcCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCH----HHHHHHHHHHHHHhc---------------
Q 042825 413 LRNATNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTE----QGIAQFESEITVLTK--------------- 472 (631)
Q Consensus 413 l~~~t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~----~~~~~~~~Ei~~l~~--------------- 472 (631)
.....++|...+.||+|+||.||+|+.. +++.||||++....... ...+++.+|++++.+
T Consensus 38 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~ 117 (320)
T 3a99_A 38 KEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWF 117 (320)
T ss_dssp --CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEE
T ss_pred cCCccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEE
Confidence 3445678999999999999999999864 68999999997643221 112345566666543
Q ss_pred ----------------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC-------------------------CCcEEE
Q 042825 473 ----------------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG-------------------------DDMRVA 511 (631)
Q Consensus 473 ----------------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g-------------------------~~~kl~ 511 (631)
++|.+++.. ...+++.....++.+++.| +.+||+
T Consensus 118 ~~~~~~~lv~e~~~~~~~L~~~l~~-----~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~kL~ 192 (320)
T 3a99_A 118 ERPDSFVLILERPEPVQDLFDFITE-----RGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLI 192 (320)
T ss_dssp ECSSEEEEEEECCSSEEEHHHHHHH-----HCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTTEEEEC
T ss_pred ecCCcEEEEEEcCCCCccHHHHHhc-----cCCCCHHHHHHHHHHHHHHHHHHHHCCcEeCCCCHHHEEEeCCCCCEEEe
Confidence 334444432 2357888888888887765 457899
Q ss_pred eeccccccCCCCccccccccccCcccccccccccCCC-CchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHhHh
Q 042825 512 DFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRI-TAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQK 590 (631)
Q Consensus 512 DFGla~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~-~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~~~ 590 (631)
|||+++..... ......||+.|+|||++.+..+ +.++|||||||++|||++|+.||... ..........
T Consensus 193 Dfg~~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~------~~~~~~~~~~ 262 (320)
T 3a99_A 193 DFGSGALLKDT----VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIRGQVFF 262 (320)
T ss_dssp CCTTCEECCSS----CBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSH------HHHHHCCCCC
T ss_pred eCccccccccc----cccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCCh------hhhhcccccc
Confidence 99999876422 2344679999999999887765 68899999999999999999999742 1111111111
Q ss_pred hhcCChhHHHHHHhhcCCChhhHHhHHHHHH
Q 042825 591 MHKNHDTFQMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 591 ~~~~~~~l~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
....++++.+++.+|+..||.+|+++.++++
T Consensus 263 ~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 293 (320)
T 3a99_A 263 RQRVSSECQHLIRWCLALRPSDRPTFEEIQN 293 (320)
T ss_dssp SSCCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred cccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 1223578999999999999999999998875
|
| >2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=1.1e-21 Score=200.99 Aligned_cols=206 Identities=19% Similarity=0.315 Sum_probs=131.2
Q ss_pred hhcCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc---------------------
Q 042825 415 NATNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK--------------------- 472 (631)
Q Consensus 415 ~~t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~--------------------- 472 (631)
...++|...+.||+|+||.||+|+.. +++.||||++..... ....+++.+|++++.+
T Consensus 12 i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 90 (303)
T 2vwi_A 12 INRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKC-QTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWL 90 (303)
T ss_dssp -CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC-----------------CCCCCCCTTBCCEEEEEESSSCEEE
T ss_pred cchhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhc-chhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEE
Confidence 34578999999999999999999864 689999998865432 2345678889888765
Q ss_pred -------CChhHHhHhhhhc---CCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccc
Q 042825 473 -------GTLGRHLFNWEEE---GLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRL 518 (631)
Q Consensus 473 -------gsL~~~L~~~~~~---~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~ 518 (631)
++|.+++...... ....+++.....++.+++.| +.+||+|||+++.
T Consensus 91 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~ 170 (303)
T 2vwi_A 91 VMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAF 170 (303)
T ss_dssp EEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTCCEEECCCHHHHH
T ss_pred EehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCCChhhEEEcCCCCEEEEeccchhe
Confidence 5777777543222 23458899999998888776 5678999999987
Q ss_pred cCCCCc---cccccccccCccccccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHhHh----
Q 042825 519 VPENGK---HSILTKVAGTFGYLAPEYIVT-GRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQK---- 590 (631)
Q Consensus 519 ~~~~~~---~~~~~~~~gt~~Y~aPE~~~~-~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~~~---- 590 (631)
...... ........||+.|+|||++.+ ..++.++|||||||++|||++|+.||............+......
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 250 (303)
T 2vwi_A 171 LATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLETG 250 (303)
T ss_dssp CC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHHTSSCCCTTC-
T ss_pred eccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhHHHHHhccCCCccccc
Confidence 642211 112234579999999999875 568999999999999999999999998654432221111111000
Q ss_pred ------hhcCChhHHHHHHhhcCCChhhHHhHHHHHH
Q 042825 591 ------MHKNHDTFQMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 591 ------~~~~~~~l~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
....+.++.+++.+|+..||.+|+++.++++
T Consensus 251 ~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 287 (303)
T 2vwi_A 251 VQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLR 287 (303)
T ss_dssp ----CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred cccchhhhhhhHHHHHHHHHHccCChhhCcCHHHHhh
Confidence 0112457899999999999999999998875
|
| >4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} | Back alignment and structure |
|---|
Probab=99.84 E-value=3.8e-21 Score=205.22 Aligned_cols=194 Identities=14% Similarity=0.222 Sum_probs=137.7
Q ss_pred cCCcccceeecCCCceEEEEEEecCCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc------------------------
Q 042825 417 TNNFSEENRLGRGGVGTVYKGELKDGTEVGVKRMELGSVTEQGIAQFESEITVLTK------------------------ 472 (631)
Q Consensus 417 t~~f~~~~~iG~G~fg~Vyk~~~~~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~------------------------ 472 (631)
..+|...+.||+|+||+||+|+...+..||+|++...... ..+|++++..
T Consensus 39 ~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~~------~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~ 112 (394)
T 4e7w_A 39 EIAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRF------KNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVF 112 (394)
T ss_dssp EEEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTTS------CCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEE
T ss_pred cceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcch------HHHHHHHHHhCCCCCcceEEEEEEecCCCCCceE
Confidence 3468899999999999999999887777999998754321 2357777765
Q ss_pred ---------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC-------------------------CCcEEEeeccccc
Q 042825 473 ---------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG-------------------------DDMRVADFGLVRL 518 (631)
Q Consensus 473 ---------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g-------------------------~~~kl~DFGla~~ 518 (631)
+++.+.+..+ ......+++.....++.++++| +.+||+|||+|+.
T Consensus 113 ~~lv~e~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~~kL~DFG~a~~ 191 (394)
T 4e7w_A 113 LNLVLEYVPETVYRASRHY-AKLKQTMPMLLIKLYMYQLLRSLAYIHSIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKI 191 (394)
T ss_dssp EEEEEECCSEEHHHHHHHH-HHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTEEEECCCTTCEE
T ss_pred EEEEeeccCccHHHHHHHH-HhhcCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEcCCCCcEEEeeCCCccc
Confidence 1111111111 1223567888888888887765 4578999999987
Q ss_pred cCCCCccccccccccCcccccccccccC-CCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHh---------
Q 042825 519 VPENGKHSILTKVAGTFGYLAPEYIVTG-RITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWF--------- 588 (631)
Q Consensus 519 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~--------- 588 (631)
..... ......||+.|+|||++.+. .++.++||||+||++|||++|+.||.+..... ....+....
T Consensus 192 ~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~-~l~~i~~~~g~p~~~~~~ 267 (394)
T 4e7w_A 192 LIAGE---PNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGID-QLVEIIKVLGTPSREQIK 267 (394)
T ss_dssp CCTTC---CCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHHHCCCCHHHHH
T ss_pred ccCCC---CCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHhCCCCHHHHH
Confidence 64222 23456789999999998765 59999999999999999999999998654221 111111110
Q ss_pred --------------------Hhh-hcCChhHHHHHHhhcCCChhhHHhHHHHHH
Q 042825 589 --------------------QKM-HKNHDTFQMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 589 --------------------~~~-~~~~~~l~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
... ...++++.+++.++|..||.+|+++.++++
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 321 (394)
T 4e7w_A 268 TMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALC 321 (394)
T ss_dssp HHCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred hhChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhc
Confidence 000 013468999999999999999999998875
|
| >1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=5.1e-21 Score=195.68 Aligned_cols=198 Identities=21% Similarity=0.231 Sum_probs=145.8
Q ss_pred hhcCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCC---C----HHHHHHHHHHHHHHhc--------------
Q 042825 415 NATNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSV---T----EQGIAQFESEITVLTK-------------- 472 (631)
Q Consensus 415 ~~t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~---~----~~~~~~~~~Ei~~l~~-------------- 472 (631)
...++|...+.||+|+||.||+|+.. +|+.||||++..... . ....+.+.+|++++.+
T Consensus 14 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~ 93 (298)
T 1phk_A 14 GFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTY 93 (298)
T ss_dssp -CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEE
T ss_pred chhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeee
Confidence 44578999999999999999999976 589999999976431 1 1234567889888764
Q ss_pred ---------------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEee
Q 042825 473 ---------------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADF 513 (631)
Q Consensus 473 ---------------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DF 513 (631)
++|.+++.. ...+++.....++.+++.| +.+||+||
T Consensus 94 ~~~~~~~lv~e~~~~~~L~~~l~~-----~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~df 168 (298)
T 1phk_A 94 ETNTFFFLVFDLMKKGELFDYLTE-----KVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDF 168 (298)
T ss_dssp ECSSEEEEEEECCTTCBHHHHHHH-----HSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCC
T ss_pred ccCCeEEEEEeccCCCcHHHHHhc-----cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEcCCCcEEEecc
Confidence 566666642 2357888888888888765 56899999
Q ss_pred ccccccCCCCccccccccccCcccccccccc------cCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHH
Q 042825 514 GLVRLVPENGKHSILTKVAGTFGYLAPEYIV------TGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATW 587 (631)
Q Consensus 514 Gla~~~~~~~~~~~~~~~~gt~~Y~aPE~~~------~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~ 587 (631)
|+++...... ......||+.|+|||++. ...++.++||||||+++|||++|+.||....... ....+...
T Consensus 169 g~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~-~~~~~~~~ 244 (298)
T 1phk_A 169 GFSCQLDPGE---KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQML-MLRMIMSG 244 (298)
T ss_dssp TTCEECCTTC---CBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHT
T ss_pred cchhhcCCCc---ccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHHH-HHHHHhcC
Confidence 9998764222 234567999999999985 4568999999999999999999999997643211 11111110
Q ss_pred h-H----hhhcCChhHHHHHHhhcCCChhhHHhHHHHHH
Q 042825 588 F-Q----KMHKNHDTFQMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 588 ~-~----~~~~~~~~l~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
. . .....+.++.+++.+||..||.+|+++.++++
T Consensus 245 ~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (298)
T 1phk_A 245 NYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA 283 (298)
T ss_dssp CCCCCTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred CcccCcccccccCHHHHHHHHHHccCCcccCCCHHHHHh
Confidence 0 0 00123467999999999999999999998875
|
| >3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.84 E-value=1e-20 Score=196.94 Aligned_cols=205 Identities=19% Similarity=0.235 Sum_probs=138.0
Q ss_pred CHHHHHhhcCCcccceeecCCCceEEEEEEecCCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc----------------
Q 042825 409 PIQVLRNATNNFSEENRLGRGGVGTVYKGELKDGTEVGVKRMELGSVTEQGIAQFESEITVLTK---------------- 472 (631)
Q Consensus 409 ~~~~l~~~t~~f~~~~~iG~G~fg~Vyk~~~~~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~---------------- 472 (631)
+...-....++|...+.||+|+||.||+|+.. ++.||||++... ....+.+|.+++..
T Consensus 28 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~-----~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~ 101 (337)
T 3mdy_A 28 PLLVQRTIAKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTT-----EEASWFRETEIYQTVLMRHENILGFIAADI 101 (337)
T ss_dssp CHHHHTTHHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGG-----GHHHHHHHHHHHTSTTCCCTTBCCEEEEEE
T ss_pred CcccccccccceEEEeEeecCCCeEEEEEEEC-CceEEEEEEecc-----ccchhhhHHHHHHHHhhcCCCeeeEEEEEc
Confidence 33334455678999999999999999999985 899999998653 22344445544432
Q ss_pred ------------------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC-----------------------------
Q 042825 473 ------------------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG----------------------------- 505 (631)
Q Consensus 473 ------------------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g----------------------------- 505 (631)
|+|.+++.. ..+++.....++.+++.|
T Consensus 102 ~~~~~~~~~~lv~e~~~~g~L~~~l~~------~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill 175 (337)
T 3mdy_A 102 KGTGSWTQLYLITDYHENGSLYDYLKS------TTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILV 175 (337)
T ss_dssp ESCGGGCEEEEEECCCTTCBHHHHHHH------CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEE
T ss_pred cCCCCCCceEEEEeccCCCcHHHHhhc------cCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEE
Confidence 456555532 247888888777766542
Q ss_pred ---CCcEEEeeccccccCCCCcc--ccccccccCcccccccccccCCCCch------hhHHHHHHHHHHHHcC-------
Q 042825 506 ---DDMRVADFGLVRLVPENGKH--SILTKVAGTFGYLAPEYIVTGRITAK------VDVYSFGMILMDLITG------- 567 (631)
Q Consensus 506 ---~~~kl~DFGla~~~~~~~~~--~~~~~~~gt~~Y~aPE~~~~~~~~~k------~DVwS~GvvL~ElltG------- 567 (631)
+.+||+|||+++........ .......||+.|+|||++.+..++.+ +|||||||++|||+||
T Consensus 176 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~ 255 (337)
T 3mdy_A 176 KKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIV 255 (337)
T ss_dssp CTTSCEEECCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBC
T ss_pred CCCCCEEEEeCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCccccc
Confidence 45789999999876422211 11234679999999999987766554 9999999999999999
Q ss_pred ---CCCCCCCCCChHHHHHHHHHhHh-----hh-------cCChhHHHHHHhhcCCChhhHHhHHHHHHHHHh
Q 042825 568 ---RKVVDATHSDPEYIIHLATWFQK-----MH-------KNHDTFQMAIDKTIQLDEENLANVSTVAELGDH 625 (631)
Q Consensus 568 ---~~P~~~~~~~~~~~~~l~~~~~~-----~~-------~~~~~l~~~id~~L~~d~~~r~~~~~vl~lal~ 625 (631)
+.||............+...... .. ...+++.+++.+|+..||.+|+++.++++..-.
T Consensus 256 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~ 328 (337)
T 3mdy_A 256 EEYQLPYHDLVPSDPSYEDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAK 328 (337)
T ss_dssp CCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHH
T ss_pred ccccccHhhhcCCCCchhhhHHHHhhhccCccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHH
Confidence 67775432221111122221100 00 012358899999999999999999998876443
|
| >2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* | Back alignment and structure |
|---|
Probab=99.84 E-value=4.6e-21 Score=194.37 Aligned_cols=191 Identities=25% Similarity=0.399 Sum_probs=142.9
Q ss_pred hcCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc----------------------
Q 042825 416 ATNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK---------------------- 472 (631)
Q Consensus 416 ~t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~---------------------- 472 (631)
..++|+..+.||+|+||.||+|+.. +++.||||++.... +.+.+|++++.+
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~------~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 82 (284)
T 2a19_B 9 FGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN------EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPET 82 (284)
T ss_dssp HHHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS------GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC---
T ss_pred hccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc------HHHHHHHHHHHhCCCCCEEEEeeeEeccccCccc
Confidence 3457899999999999999999976 69999999997643 245667776643
Q ss_pred ----------------------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------C
Q 042825 473 ----------------------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------D 506 (631)
Q Consensus 473 ----------------------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~ 506 (631)
|+|.+++.. .....+++.....++.+++.| +
T Consensus 83 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~ 159 (284)
T 2a19_B 83 SSKNSSRSKTKCLFIQMEFCDKGTLEQWIEK---RRGEKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFLVDTK 159 (284)
T ss_dssp ------CCEEEEEEEEECCCCSCBHHHHHHH---GGGSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETT
T ss_pred ccccccccCcceEEEEEeccCCCCHHHHHhh---ccCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCHHHEEEcCCC
Confidence 355555532 122468888888888888876 4
Q ss_pred CcEEEeeccccccCCCCccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHH
Q 042825 507 DMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLAT 586 (631)
Q Consensus 507 ~~kl~DFGla~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~ 586 (631)
.+||+|||+++...... ......||+.|+|||.+.+..++.++|||||||++|||++|..|+... ......
T Consensus 160 ~~kl~Dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~------~~~~~~ 230 (284)
T 2a19_B 160 QVKIGDFGLVTSLKNDG---KRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFET------SKFFTD 230 (284)
T ss_dssp EEEECCCTTCEESSCCS---CCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHH------HHHHHH
T ss_pred CEEECcchhheeccccc---cccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhH------HHHHHH
Confidence 57899999998764322 234457999999999999989999999999999999999999987521 111111
Q ss_pred HhHhhh--cCChhHHHHHHhhcCCChhhHHhHHHHHHHHH
Q 042825 587 WFQKMH--KNHDTFQMAIDKTIQLDEENLANVSTVAELGD 624 (631)
Q Consensus 587 ~~~~~~--~~~~~l~~~id~~L~~d~~~r~~~~~vl~lal 624 (631)
...... ..+.++.+++.+||..||.+|+++.++++...
T Consensus 231 ~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~ 270 (284)
T 2a19_B 231 LRDGIISDIFDKKEKTLLQKLLSKKPEDRPNTSEILRTLT 270 (284)
T ss_dssp HHTTCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred hhcccccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 111111 12467899999999999999999999887543
|
| >3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.84 E-value=5.5e-21 Score=199.05 Aligned_cols=195 Identities=25% Similarity=0.376 Sum_probs=130.7
Q ss_pred cCCcccceeecCCCceEEEEEEecCCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc------------------------
Q 042825 417 TNNFSEENRLGRGGVGTVYKGELKDGTEVGVKRMELGSVTEQGIAQFESEITVLTK------------------------ 472 (631)
Q Consensus 417 t~~f~~~~~iG~G~fg~Vyk~~~~~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~------------------------ 472 (631)
.++|...+.||+|+||.||+|+. +++.||||++... ....+..|.+++..
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~-----~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~ 85 (336)
T 3g2f_A 12 LDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFA-----NRQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRM 85 (336)
T ss_dssp TTSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGG-----GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCE
T ss_pred hHHhheeeecccCCCeEEEEEEE-CCeEEEEEEeecc-----chhhHHHHHHHHHHHhccCcchhhheecccccccCCCc
Confidence 46899999999999999999987 5899999999753 22344444444321
Q ss_pred -----------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC---------------------------------CCc
Q 042825 473 -----------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG---------------------------------DDM 508 (631)
Q Consensus 473 -----------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g---------------------------------~~~ 508 (631)
|+|.+++.. ...+|.....|+.++++| +.+
T Consensus 86 ~~~lv~e~~~~g~L~~~l~~------~~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~ 159 (336)
T 3g2f_A 86 EYLLVMEYYPNGSLXKYLSL------HTSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTC 159 (336)
T ss_dssp EEEEEECCCTTCBHHHHHHH------CCBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCE
T ss_pred eEEEEEecCCCCcHHHHHhh------cccchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcE
Confidence 455555532 234777777777766542 457
Q ss_pred EEEeeccccccCCCCc------cccccccccCccccccccccc-------CCCCchhhHHHHHHHHHHHHcCCCCCCCCC
Q 042825 509 RVADFGLVRLVPENGK------HSILTKVAGTFGYLAPEYIVT-------GRITAKVDVYSFGMILMDLITGRKVVDATH 575 (631)
Q Consensus 509 kl~DFGla~~~~~~~~------~~~~~~~~gt~~Y~aPE~~~~-------~~~~~k~DVwS~GvvL~ElltG~~P~~~~~ 575 (631)
||+|||+++.+..... ........||+.|+|||++.+ ..++.++|||||||++|||++|+.||....
T Consensus 160 kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~ 239 (336)
T 3g2f_A 160 VISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGE 239 (336)
T ss_dssp EECCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTS
T ss_pred EEeeccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCcc
Confidence 8999999987642211 122334579999999999876 457789999999999999999987764322
Q ss_pred CChHH-------------HHHHHHHhHh-----hhcC--------ChhHHHHHHhhcCCChhhHHhHHHHHHHH
Q 042825 576 SDPEY-------------IIHLATWFQK-----MHKN--------HDTFQMAIDKTIQLDEENLANVSTVAELG 623 (631)
Q Consensus 576 ~~~~~-------------~~~l~~~~~~-----~~~~--------~~~l~~~id~~L~~d~~~r~~~~~vl~la 623 (631)
..... ...+...+.. ..+. +.++.+++.+||..||.+|+++.++++..
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L 313 (336)
T 3g2f_A 240 SVPEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERM 313 (336)
T ss_dssp CCCCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHH
T ss_pred chhHHHHhhhcccCCCchHHHHHhhhcccccCCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHH
Confidence 11000 0001111100 0000 12589999999999999999999987753
|
| >2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.84 E-value=5.7e-21 Score=197.13 Aligned_cols=198 Identities=21% Similarity=0.335 Sum_probs=122.4
Q ss_pred cCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHH-HHhc----------------------
Q 042825 417 TNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEIT-VLTK---------------------- 472 (631)
Q Consensus 417 t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~-~l~~---------------------- 472 (631)
.++|+..+.||+|+||.||+|+.. +|+.||||++....... ...++..|.. ++..
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv 102 (318)
T 2dyl_A 24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKE-ENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIA 102 (318)
T ss_dssp GGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHH-HHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred hccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccch-HHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEE
Confidence 467888999999999999999976 68999999998654333 3333444433 3432
Q ss_pred ----CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC-------------------------CCcEEEeeccccccCCCC
Q 042825 473 ----GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG-------------------------DDMRVADFGLVRLVPENG 523 (631)
Q Consensus 473 ----gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g-------------------------~~~kl~DFGla~~~~~~~ 523 (631)
+.+...+.. .....+++.....++.+++.| +.+||+|||+++.....
T Consensus 103 ~e~~~~~~~~l~~---~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~- 178 (318)
T 2dyl_A 103 MELMGTCAEKLKK---RMQGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDD- 178 (318)
T ss_dssp ECCCSEEHHHHHH---HHTSCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCGGGEEECTTSCEEECCCTTC-------
T ss_pred EeccCCcHHHHHH---HhccCCCHHHHHHHHHHHHHHHHHHHhhCCEEeCCCCHHHEEECCCCCEEEEECCCchhccCC-
Confidence 122222211 112457777777777666554 46789999999876422
Q ss_pred ccccccccccCcccccccccc-----cCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHhHhhh----cC
Q 042825 524 KHSILTKVAGTFGYLAPEYIV-----TGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQKMH----KN 594 (631)
Q Consensus 524 ~~~~~~~~~gt~~Y~aPE~~~-----~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~~~~~----~~ 594 (631)
.......||+.|+|||++. ...++.++|||||||++|||++|+.||............+........ ..
T Consensus 179 --~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (318)
T 2dyl_A 179 --KAKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEEPPLLPGHMGF 256 (318)
T ss_dssp ----------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHHSCCCCCCSSSCC
T ss_pred --ccccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccHHHHHHHhccCCCCCCccCCC
Confidence 1233457999999999984 456899999999999999999999999864332222212211111111 13
Q ss_pred ChhHHHHHHhhcCCChhhHHhHHHHHH
Q 042825 595 HDTFQMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 595 ~~~l~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
+.++.+++.+||..||.+|+++.++++
T Consensus 257 ~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (318)
T 2dyl_A 257 SGDFQSFVKDCLTKDHRKRPKYNKLLE 283 (318)
T ss_dssp CHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred CHHHHHHHHHHccCChhHCcCHHHHhh
Confidence 568999999999999999999998775
|
| >1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A | Back alignment and structure |
|---|
Probab=99.84 E-value=1.5e-20 Score=198.70 Aligned_cols=194 Identities=19% Similarity=0.249 Sum_probs=136.4
Q ss_pred cCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc-----------------------
Q 042825 417 TNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK----------------------- 472 (631)
Q Consensus 417 t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~----------------------- 472 (631)
.++|...+.||+|+||+||+|+.. +++.||||++... ....+.+.+|++++.+
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~ 94 (373)
T 1q8y_A 18 DARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGD---KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDH 94 (373)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC---HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEE
T ss_pred CCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCC---ccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHH
Confidence 357999999999999999999964 6899999999743 3345667777776653
Q ss_pred -------------------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC-------------------------C--
Q 042825 473 -------------------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG-------------------------D-- 506 (631)
Q Consensus 473 -------------------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g-------------------------~-- 506 (631)
++|.+++.. .....+++.....|+.+++.| +
T Consensus 95 ~~~~~~~~~~~~lv~e~~~~~L~~~~~~---~~~~~~~~~~~~~i~~qi~~aL~~lH~~~~ivH~Dikp~NIll~~~~~~ 171 (373)
T 1q8y_A 95 FNHKGPNGVHVVMVFEVLGENLLALIKK---YEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSP 171 (373)
T ss_dssp EEEEETTEEEEEEEECCCCEEHHHHHHH---TTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGEEEEEEETT
T ss_pred hhccCCCCceEEEEEecCCCCHHHHHHH---hhccCCcHHHHHHHHHHHHHHHHHHHhcCCEEecCCChHHeEEeccCCC
Confidence 233333322 122347888888888777654 0
Q ss_pred ----CcEEEeeccccccCCCCccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCh----
Q 042825 507 ----DMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDP---- 578 (631)
Q Consensus 507 ----~~kl~DFGla~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~---- 578 (631)
.+||+|||+++..... .....||+.|+|||++.+..++.++|||||||++|||+||+.||.......
T Consensus 172 ~~~~~~kl~Dfg~a~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~ 246 (373)
T 1q8y_A 172 ENLIQIKIADLGNACWYDEH-----YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKD 246 (373)
T ss_dssp TTEEEEEECCCTTCEETTBC-----CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CH
T ss_pred cCcceEEEcccccccccCCC-----CCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCCh
Confidence 4789999999876421 234579999999999999999999999999999999999999998543211
Q ss_pred -HHHHHHHHHh---------------------------------------Hhhh----cCChhHHHHHHhhcCCChhhHH
Q 042825 579 -EYIIHLATWF---------------------------------------QKMH----KNHDTFQMAIDKTIQLDEENLA 614 (631)
Q Consensus 579 -~~~~~l~~~~---------------------------------------~~~~----~~~~~l~~~id~~L~~d~~~r~ 614 (631)
.....+.... .... ..+.++.++|.+||..||.+|+
T Consensus 247 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp 326 (373)
T 1q8y_A 247 DDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRA 326 (373)
T ss_dssp HHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCB
T ss_pred HHHHHHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccC
Confidence 0111111100 0000 1124678999999999999999
Q ss_pred hHHHHHH
Q 042825 615 NVSTVAE 621 (631)
Q Consensus 615 ~~~~vl~ 621 (631)
++.++++
T Consensus 327 t~~ell~ 333 (373)
T 1q8y_A 327 DAGGLVN 333 (373)
T ss_dssp CHHHHHT
T ss_pred CHHHHhh
Confidence 9999875
|
| >2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.84 E-value=1.9e-20 Score=194.36 Aligned_cols=199 Identities=22% Similarity=0.381 Sum_probs=146.5
Q ss_pred CCcccceeecCCCceEEEEEEe-----cCCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc--------------------
Q 042825 418 NNFSEENRLGRGGVGTVYKGEL-----KDGTEVGVKRMELGSVTEQGIAQFESEITVLTK-------------------- 472 (631)
Q Consensus 418 ~~f~~~~~iG~G~fg~Vyk~~~-----~~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~-------------------- 472 (631)
++|...+.||+|+||.||+|++ .+|+.||||++... .....+++.+|++++.+
T Consensus 41 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 118 (326)
T 2w1i_A 41 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS--TEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRN 118 (326)
T ss_dssp GGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSC--CSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----C
T ss_pred HHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccC--CHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCc
Confidence 4688899999999999999984 35889999999764 23456789999999876
Q ss_pred ----------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccc
Q 042825 473 ----------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRL 518 (631)
Q Consensus 473 ----------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~ 518 (631)
++|.+++.. ....+++.....++.+++.| +.+||+|||+++.
T Consensus 119 ~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli~~~~~~kL~Dfg~~~~ 194 (326)
T 2w1i_A 119 LKLIMEYLPYGSLRDYLQK----HKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKV 194 (326)
T ss_dssp CEEEECCCTTCBHHHHHHH----STTSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETTEEEECCCTTCEE
T ss_pred eEEEEECCCCCCHHHHHHh----cccCCCHHHHHHHHHHHHHHHHHHHhCCEeccCCCcceEEEcCCCcEEEecCcchhh
Confidence 455555532 23458899999998888876 4578999999987
Q ss_pred cCCCCcc-ccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCC----------CC-hHHHHHHHH
Q 042825 519 VPENGKH-SILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATH----------SD-PEYIIHLAT 586 (631)
Q Consensus 519 ~~~~~~~-~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~----------~~-~~~~~~l~~ 586 (631)
....... .......++..|+|||.+.+..++.++|||||||++|||+||+.|+.... .. ......+..
T Consensus 195 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (326)
T 2w1i_A 195 LPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIE 274 (326)
T ss_dssp CCSSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHHHHH
T ss_pred ccccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHHHHHH
Confidence 7533221 11233567888999999988889999999999999999999999986321 00 000111222
Q ss_pred HhHhh------hcCChhHHHHHHhhcCCChhhHHhHHHHHHH
Q 042825 587 WFQKM------HKNHDTFQMAIDKTIQLDEENLANVSTVAEL 622 (631)
Q Consensus 587 ~~~~~------~~~~~~l~~~id~~L~~d~~~r~~~~~vl~l 622 (631)
.+... ...++++.+++.+|+..||.+||++.++++.
T Consensus 275 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~ 316 (326)
T 2w1i_A 275 LLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALR 316 (326)
T ss_dssp HHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHH
T ss_pred HhhcCCCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 22111 1224689999999999999999999998764
|
| >2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* | Back alignment and structure |
|---|
Probab=99.84 E-value=2.7e-21 Score=202.46 Aligned_cols=201 Identities=14% Similarity=0.168 Sum_probs=146.6
Q ss_pred hcCCcccceeecCCCceEEEEEEecCCcEEEEEEEecCCCCH---------------HHHHHHHHHHHHHhc--------
Q 042825 416 ATNNFSEENRLGRGGVGTVYKGELKDGTEVGVKRMELGSVTE---------------QGIAQFESEITVLTK-------- 472 (631)
Q Consensus 416 ~t~~f~~~~~iG~G~fg~Vyk~~~~~g~~vAvK~l~~~~~~~---------------~~~~~~~~Ei~~l~~-------- 472 (631)
..++|...+.||+|+||.||+|+. +|+.||||++....... ...+.+.+|++++.+
T Consensus 29 ~~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~ 107 (348)
T 2pml_X 29 YINDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLT 107 (348)
T ss_dssp EETTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCC
T ss_pred ccCceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcce
Confidence 356899999999999999999999 89999999997532111 112789999999876
Q ss_pred --------------------CChhHHhHh---hhhcCCCCCCHHHHHHHHHHhhcC------------------------
Q 042825 473 --------------------GTLGRHLFN---WEEEGLEPLEWNTRLNIALDVARG------------------------ 505 (631)
Q Consensus 473 --------------------gsL~~~L~~---~~~~~~~~L~~~~~~~I~~~ia~g------------------------ 505 (631)
|+|.+++.. ........+++.....++.+++.|
T Consensus 108 ~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dl~p~Nil~~~ 187 (348)
T 2pml_X 108 CEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMDK 187 (348)
T ss_dssp CSEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTSCEECCCCCGGGEEECT
T ss_pred EEEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhccCCEeecCCChHhEEEcC
Confidence 355554210 011114568888888888777654
Q ss_pred -CCcEEEeeccccccCCCCccccccccccCcccccccccccC-CCCc-hhhHHHHHHHHHHHHcCCCCCCCCCCChHHHH
Q 042825 506 -DDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTG-RITA-KVDVYSFGMILMDLITGRKVVDATHSDPEYII 582 (631)
Q Consensus 506 -~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~-k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~ 582 (631)
+.+||+|||+++..... ......||..|+|||.+.+. .++. ++|||||||++|||++|+.||...........
T Consensus 188 ~~~~kl~dfg~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~ 263 (348)
T 2pml_X 188 NGRVKLSDFGESEYMVDK----KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELFN 263 (348)
T ss_dssp TSCEEECCCTTCEECBTT----EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCSHHHHH
T ss_pred CCcEEEeccccccccccc----cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHH
Confidence 46789999999876422 23456799999999999877 6766 99999999999999999999987654322222
Q ss_pred HHHHHhHh-h-------------------hcCChhHHHHHHhhcCCChhhHHhHHHHHH
Q 042825 583 HLATWFQK-M-------------------HKNHDTFQMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 583 ~l~~~~~~-~-------------------~~~~~~l~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
.+...... . ...+.++.+++.+||..||.+|+++.++++
T Consensus 264 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~ 322 (348)
T 2pml_X 264 NIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALK 322 (348)
T ss_dssp HHTSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred HHhccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 22111000 0 123568899999999999999999998875
|
| >1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* | Back alignment and structure |
|---|
Probab=99.84 E-value=2.3e-21 Score=197.48 Aligned_cols=204 Identities=21% Similarity=0.327 Sum_probs=138.1
Q ss_pred cCCcccceeecCCCceEEEEEEec--CCc--EEEEEEEecCCC-CHHHHHHHHHHHHHHhc-------------------
Q 042825 417 TNNFSEENRLGRGGVGTVYKGELK--DGT--EVGVKRMELGSV-TEQGIAQFESEITVLTK------------------- 472 (631)
Q Consensus 417 t~~f~~~~~iG~G~fg~Vyk~~~~--~g~--~vAvK~l~~~~~-~~~~~~~~~~Ei~~l~~------------------- 472 (631)
.++|+..+.||+|+||+||+|++. +++ .||||++..... .....+++.+|++++.+
T Consensus 17 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 96 (291)
T 1u46_A 17 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMK 96 (291)
T ss_dssp GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCE
T ss_pred hhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCCce
Confidence 357889999999999999999864 233 689999875432 22456789999998875
Q ss_pred --------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccC
Q 042825 473 --------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVP 520 (631)
Q Consensus 473 --------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~ 520 (631)
|+|.+++... ...+++.....++.+++.+ +.+||+|||+++...
T Consensus 97 ~v~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~ 172 (291)
T 1u46_A 97 MVTELAPLGSLLDRLRKH----QGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALP 172 (291)
T ss_dssp EEEECCTTCBHHHHHHHH----GGGSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETTEEEECCCTTCEECC
T ss_pred eeEecccCCCHHHHHHhc----cCCcCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEEcCCCCEEEcccccccccc
Confidence 5666665431 2347888888888888765 457899999998774
Q ss_pred CCCcc-ccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChHHHHHHHHHh---HhhhcCC
Q 042825 521 ENGKH-SILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT-GRKVVDATHSDPEYIIHLATWF---QKMHKNH 595 (631)
Q Consensus 521 ~~~~~-~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~Ellt-G~~P~~~~~~~~~~~~~l~~~~---~~~~~~~ 595 (631)
..... .......+|..|+|||++.+..++.++||||||+++|||++ |+.||....... ....+.... ......+
T Consensus 173 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 251 (291)
T 1u46_A 173 QNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQ-ILHKIDKEGERLPRPEDCP 251 (291)
T ss_dssp C-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH-HHHHHHTSCCCCCCCTTCC
T ss_pred ccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHHH-HHHHHHccCCCCCCCcCcC
Confidence 33221 12234568889999999988889999999999999999999 999998653221 111111100 0011234
Q ss_pred hhHHHHHHhhcCCChhhHHhHHHHHHHHHh
Q 042825 596 DTFQMAIDKTIQLDEENLANVSTVAELGDH 625 (631)
Q Consensus 596 ~~l~~~id~~L~~d~~~r~~~~~vl~lal~ 625 (631)
.++.+++..|+..||.+|+++.++++....
T Consensus 252 ~~l~~li~~~l~~~p~~Rps~~~l~~~l~~ 281 (291)
T 1u46_A 252 QDIYNVMVQCWAHKPEDRPTFVALRDFLLE 281 (291)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred HHHHHHHHHHccCCcccCcCHHHHHHHHHH
Confidence 689999999999999999999999876543
|
| >1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=4e-21 Score=199.51 Aligned_cols=201 Identities=23% Similarity=0.275 Sum_probs=144.4
Q ss_pred CCcccceeecCCCceEEEEEEec-CCcE--EEEEEEecCCCCHHHHHHHHHHHHHHhc----------------------
Q 042825 418 NNFSEENRLGRGGVGTVYKGELK-DGTE--VGVKRMELGSVTEQGIAQFESEITVLTK---------------------- 472 (631)
Q Consensus 418 ~~f~~~~~iG~G~fg~Vyk~~~~-~g~~--vAvK~l~~~~~~~~~~~~~~~Ei~~l~~---------------------- 472 (631)
++|...+.||+|+||.||+|+.. ++.. ||||++.... .....+++.+|++++.+
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~-~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~l 103 (327)
T 1fvr_A 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYA-SKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYL 103 (327)
T ss_dssp GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC-------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEE
T ss_pred HHccceeeeecCCCceEEEEEEccCCcccceeeeeecccc-chHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEE
Confidence 57889999999999999999965 4664 4999987532 23345678999998865
Q ss_pred -------CChhHHhHhhh-----------hcCCCCCCHHHHHHHHHHhhcC------------------------CCcEE
Q 042825 473 -------GTLGRHLFNWE-----------EEGLEPLEWNTRLNIALDVARG------------------------DDMRV 510 (631)
Q Consensus 473 -------gsL~~~L~~~~-----------~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl 510 (631)
|+|.+++.... ......+++.....++.+++.| +.+||
T Consensus 104 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~~~~~kL 183 (327)
T 1fvr_A 104 AIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKI 183 (327)
T ss_dssp EECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGGGCEEE
T ss_pred EEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCccCCCCccceEEEcCCCeEEE
Confidence 57777665321 0123468999999999888876 46789
Q ss_pred EeeccccccCCCCccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChHHHHHHHHHhH
Q 042825 511 ADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT-GRKVVDATHSDPEYIIHLATWFQ 589 (631)
Q Consensus 511 ~DFGla~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~Ellt-G~~P~~~~~~~~~~~~~l~~~~~ 589 (631)
+|||+++.... ........+++.|+|||++.+..++.++|||||||++|||+| |+.||.+.... .+.....
T Consensus 184 ~Dfg~~~~~~~---~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~-----~~~~~~~ 255 (327)
T 1fvr_A 184 ADFGLSRGQEV---YVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA-----ELYEKLP 255 (327)
T ss_dssp CCTTCEESSCE---ECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHH-----HHHHHGG
T ss_pred cccCcCccccc---cccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcHH-----HHHHHhh
Confidence 99999975421 112233467889999999988889999999999999999998 99999865321 1111111
Q ss_pred h------hhcCChhHHHHHHhhcCCChhhHHhHHHHHHHHHhhh
Q 042825 590 K------MHKNHDTFQMAIDKTIQLDEENLANVSTVAELGDHCC 627 (631)
Q Consensus 590 ~------~~~~~~~l~~~id~~L~~d~~~r~~~~~vl~lal~C~ 627 (631)
. ....++++.+++.+|+..||.+|+++.++++......
T Consensus 256 ~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~ 299 (327)
T 1fvr_A 256 QGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRML 299 (327)
T ss_dssp GTCCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred cCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 1 1122468999999999999999999999987655443
|
| >2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=7.7e-21 Score=215.51 Aligned_cols=204 Identities=18% Similarity=0.234 Sum_probs=148.2
Q ss_pred hcCCcccceeecCCCceEEEEEEecC----CcEEEEEEEecCCCCHHHHHHHHHHHHHHhc-------------------
Q 042825 416 ATNNFSEENRLGRGGVGTVYKGELKD----GTEVGVKRMELGSVTEQGIAQFESEITVLTK------------------- 472 (631)
Q Consensus 416 ~t~~f~~~~~iG~G~fg~Vyk~~~~~----g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~------------------- 472 (631)
..++|...+.||+|+||.||+|++.. +..||||++.... .....++|.+|+.++.+
T Consensus 388 ~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~ 466 (656)
T 2j0j_A 388 QRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCT-SDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVW 466 (656)
T ss_dssp CGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTT-CHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCE
T ss_pred ccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccC-CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCceE
Confidence 45678889999999999999998742 5679999986543 34556789999998875
Q ss_pred --------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccC
Q 042825 473 --------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVP 520 (631)
Q Consensus 473 --------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~ 520 (631)
|+|.+++.. ....+++..+..++.+++.| +.+||+|||+++...
T Consensus 467 lv~E~~~~g~L~~~l~~----~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDikp~NILl~~~~~vkL~DFG~a~~~~ 542 (656)
T 2j0j_A 467 IIMELCTLGELRSFLQV----RKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYME 542 (656)
T ss_dssp EEEECCTTCBHHHHHHH----TTTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCCCCCCSCC
T ss_pred EEEEcCCCCcHHHHHHh----ccCCCCHHHHHHHHHHHHHHHHHHHhCCccccccchHhEEEeCCCCEEEEecCCCeecC
Confidence 667666642 23468899999998888876 457899999998764
Q ss_pred CCCccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChHHHHHHHHHhH--hhhcCChh
Q 042825 521 ENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT-GRKVVDATHSDPEYIIHLATWFQ--KMHKNHDT 597 (631)
Q Consensus 521 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~Ellt-G~~P~~~~~~~~~~~~~l~~~~~--~~~~~~~~ 597 (631)
.. .........+|+.|+|||++.+..++.++|||||||++|||++ |+.||.+....+ ....+..... .....++.
T Consensus 543 ~~-~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~-~~~~i~~~~~~~~~~~~~~~ 620 (656)
T 2j0j_A 543 DS-TYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND-VIGRIENGERLPMPPNCPPT 620 (656)
T ss_dssp C-----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH-HHHHHHHTCCCCCCTTCCHH
T ss_pred CC-cceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHHH-HHHHHHcCCCCCCCccccHH
Confidence 22 2222334567889999999998899999999999999999997 999998653221 1111111110 11122468
Q ss_pred HHHHHHhhcCCChhhHHhHHHHHHHHHhh
Q 042825 598 FQMAIDKTIQLDEENLANVSTVAELGDHC 626 (631)
Q Consensus 598 l~~~id~~L~~d~~~r~~~~~vl~lal~C 626 (631)
+.+++.+|+..||.+||++.++++.....
T Consensus 621 l~~li~~~l~~dP~~RPs~~el~~~L~~i 649 (656)
T 2j0j_A 621 LYSLMTKCWAYDPSRRPRFTELKAQLSTI 649 (656)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred HHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence 99999999999999999999988765444
|
| >3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=4.2e-21 Score=203.15 Aligned_cols=196 Identities=10% Similarity=0.051 Sum_probs=134.8
Q ss_pred cCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCC-HHHHHHHHHH---HHHHhc-------------------
Q 042825 417 TNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVT-EQGIAQFESE---ITVLTK------------------- 472 (631)
Q Consensus 417 t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~-~~~~~~~~~E---i~~l~~------------------- 472 (631)
...|...+.||+|+||+||+|+.. +|+.||||++...... ....+.+.+| +..+.+
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~ 140 (371)
T 3q60_A 61 ERKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAV 140 (371)
T ss_dssp EEEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEE
T ss_pred ceeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehhe
Confidence 445889999999999999999976 6899999999876542 2345566677 445542
Q ss_pred -------------------------------CChhHHhHhhhhcCCCCCCHHHH------HHHHHHhhcC----------
Q 042825 473 -------------------------------GTLGRHLFNWEEEGLEPLEWNTR------LNIALDVARG---------- 505 (631)
Q Consensus 473 -------------------------------gsL~~~L~~~~~~~~~~L~~~~~------~~I~~~ia~g---------- 505 (631)
|+|.+++... ...+.+..+ ..|+.+++.|
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~----~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~~iv 216 (371)
T 3q60_A 141 AVQSQPPFAQLSPGQDDYAVANYLLLMPAASVDLELLFSTL----DFVYVFRGDEGILALHILTAQLIRLAANLQSKGLV 216 (371)
T ss_dssp EETTSCSSSBCSCC---CCEEEEEEEECCCSEEHHHHHHHH----HHSCCCCHHHHHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred ecCCCCCeeeccCCcccceeeeEEEEecCCCCCHHHHHHHh----ccccchhhhhhhhhHHHHHHHHHHHHHHHHHCCCc
Confidence 2222222211 112344444 5666676665
Q ss_pred --------------CCcEEEeeccccccCCCCccccccccccCccccccccccc--CCCCchhhHHHHHHHHHHHHcCCC
Q 042825 506 --------------DDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVT--GRITAKVDVYSFGMILMDLITGRK 569 (631)
Q Consensus 506 --------------~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~--~~~~~k~DVwS~GvvL~ElltG~~ 569 (631)
+.+||+|||+|+.... ......+|+.|+|||++.+ ..++.++|||||||++|||+||+.
T Consensus 217 HrDikp~NIll~~~~~~kL~DFG~a~~~~~-----~~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~ 291 (371)
T 3q60_A 217 HGHFTPDNLFIMPDGRLMLGDVSALWKVGT-----RGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFL 291 (371)
T ss_dssp ETTCSGGGEEECTTSCEEECCGGGEEETTC-----EEEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSC
T ss_pred cCcCCHHHEEECCCCCEEEEecceeeecCC-----CccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCC
Confidence 5689999999987631 1124457799999999987 679999999999999999999999
Q ss_pred CCCCCCCChHHHHHH---H-----HH-hHhhhcCChhHHHHHHhhcCCChhhHHhHHHHHH
Q 042825 570 VVDATHSDPEYIIHL---A-----TW-FQKMHKNHDTFQMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 570 P~~~~~~~~~~~~~l---~-----~~-~~~~~~~~~~l~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
||............. . .+ .......++++.+++.+||..||.+|+++.++++
T Consensus 292 Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 352 (371)
T 3q60_A 292 PFGLVTPGIKGSWKRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAME 352 (371)
T ss_dssp STTBCCTTCTTCCCBCCTTSCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTT
T ss_pred CCCCcCcccccchhhhhhhhccccccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 998653221000000 0 00 0001123578999999999999999999998764
|
| >2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=2.2e-21 Score=198.79 Aligned_cols=194 Identities=20% Similarity=0.266 Sum_probs=139.5
Q ss_pred hcCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc----------------------
Q 042825 416 ATNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK---------------------- 472 (631)
Q Consensus 416 ~t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~---------------------- 472 (631)
..+.|+..+.||+|+||.||+|+.. +++.||+|++.... ....+++.+|++++.+
T Consensus 17 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 94 (302)
T 2j7t_A 17 PNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKS--EEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIM 94 (302)
T ss_dssp GGGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC------CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEE
T ss_pred CccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCC--HHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEE
Confidence 4567999999999999999999976 48999999986543 2345778899998875
Q ss_pred ------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCC
Q 042825 473 ------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPEN 522 (631)
Q Consensus 473 ------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~ 522 (631)
+++.+++.. ....+++.....++.+++.| +.+||+|||+++....
T Consensus 95 ~e~~~~~~l~~~~~~----~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~- 169 (302)
T 2j7t_A 95 IEFCPGGAVDAIMLE----LDRGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLK- 169 (302)
T ss_dssp EECCTTEEHHHHHHH----HTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTSCEEECCCHHHHHHHH-
T ss_pred EEeCCCCcHHHHHHh----hccCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEECCCCCEEEEECCCCccccc-
Confidence 344444432 23458888888888888765 5678999999864321
Q ss_pred CccccccccccCcccccccccc-----cCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHhHh-------
Q 042825 523 GKHSILTKVAGTFGYLAPEYIV-----TGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQK------- 590 (631)
Q Consensus 523 ~~~~~~~~~~gt~~Y~aPE~~~-----~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~~~------- 590 (631)
.........||..|+|||++. ...++.++|||||||++|||++|+.||...... ..+......
T Consensus 170 -~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~----~~~~~~~~~~~~~~~~ 244 (302)
T 2j7t_A 170 -TLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPM----RVLLKIAKSDPPTLLT 244 (302)
T ss_dssp -HHHC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHH----HHHHHHHHSCCCCCSS
T ss_pred -cccccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHH----HHHHHHhccCCcccCC
Confidence 111223457999999999983 567899999999999999999999999864322 111111111
Q ss_pred hhcCChhHHHHHHhhcCCChhhHHhHHHHHH
Q 042825 591 MHKNHDTFQMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 591 ~~~~~~~l~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
....+.++.+++.+|+..||.+|+++.++++
T Consensus 245 ~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 275 (302)
T 2j7t_A 245 PSKWSVEFRDFLKIALDKNPETRPSAAQLLE 275 (302)
T ss_dssp GGGSCHHHHHHHHHHSCSCTTTSCCHHHHTT
T ss_pred ccccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 1122457899999999999999999998765
|
| >1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=1.7e-20 Score=195.79 Aligned_cols=204 Identities=17% Similarity=0.237 Sum_probs=141.9
Q ss_pred CHHHHHhhcCCcccceeecCCCceEEEEEEecCCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc----------------
Q 042825 409 PIQVLRNATNNFSEENRLGRGGVGTVYKGELKDGTEVGVKRMELGSVTEQGIAQFESEITVLTK---------------- 472 (631)
Q Consensus 409 ~~~~l~~~t~~f~~~~~iG~G~fg~Vyk~~~~~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~---------------- 472 (631)
++..-....++|...+.||+|+||.||+|+. +|+.||||++... ....+.+|++++..
T Consensus 33 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~-----~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~ 106 (342)
T 1b6c_B 33 PLLVQRTIARTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR-----EERSWFREAEIYQTVMLRHENILGFIAADN 106 (342)
T ss_dssp CHHHHHHHHHHCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECGG-----GHHHHHHHHHHHHHSCCCCTTBCCEEEEEE
T ss_pred ceeecccccccEEEEeeecCCCCcEEEEEEE-cCccEEEEEeCch-----hHHHHHHHHHHHHHhhcCCCcEEEEEeeec
Confidence 3333445567899999999999999999998 4899999998643 34567777777643
Q ss_pred ------------------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC-----------------------------
Q 042825 473 ------------------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG----------------------------- 505 (631)
Q Consensus 473 ------------------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g----------------------------- 505 (631)
|+|.+++.. ..+++.....++.+++.|
T Consensus 107 ~~~~~~~~~~lv~e~~~~g~L~~~l~~------~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIll 180 (342)
T 1b6c_B 107 KDNGTWTQLWLVSDYHEHGSLFDYLNR------YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILV 180 (342)
T ss_dssp CCCSSCCCEEEEECCCTTCBHHHHHHH------CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSGGGEEE
T ss_pred ccCCccceeEEEEeecCCCcHHHHHhc------cCccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCHHHEEE
Confidence 355555532 247888888877776543
Q ss_pred ---CCcEEEeeccccccCCCCcc--ccccccccCcccccccccccC------CCCchhhHHHHHHHHHHHHcC-------
Q 042825 506 ---DDMRVADFGLVRLVPENGKH--SILTKVAGTFGYLAPEYIVTG------RITAKVDVYSFGMILMDLITG------- 567 (631)
Q Consensus 506 ---~~~kl~DFGla~~~~~~~~~--~~~~~~~gt~~Y~aPE~~~~~------~~~~k~DVwS~GvvL~ElltG------- 567 (631)
+.+||+|||+++........ .......||+.|+|||++.+. .++.++|||||||++|||+||
T Consensus 181 ~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~ 260 (342)
T 1b6c_B 181 KKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIH 260 (342)
T ss_dssp CTTSCEEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBC
T ss_pred CCCCCEEEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcc
Confidence 45789999999876432211 123456799999999998765 244789999999999999999
Q ss_pred ---CCCCCCCCCChHHHHHHHHHh-Hhhh----c-------CChhHHHHHHhhcCCChhhHHhHHHHHHHHH
Q 042825 568 ---RKVVDATHSDPEYIIHLATWF-QKMH----K-------NHDTFQMAIDKTIQLDEENLANVSTVAELGD 624 (631)
Q Consensus 568 ---~~P~~~~~~~~~~~~~l~~~~-~~~~----~-------~~~~l~~~id~~L~~d~~~r~~~~~vl~lal 624 (631)
+.||............+...+ .... + ..+.+.+++.+|+..||.+|+++.++++...
T Consensus 261 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~ 332 (342)
T 1b6c_B 261 EDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLS 332 (342)
T ss_dssp CCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHH
T ss_pred cccccCccccCcCcccHHHHHHHHHHHHhCCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHH
Confidence 788865432211111111111 1000 0 0136889999999999999999999887544
|
| >2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.83 E-value=4.6e-21 Score=197.57 Aligned_cols=193 Identities=20% Similarity=0.238 Sum_probs=135.1
Q ss_pred HhhcCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCH----HHHHHHHHHHHHHhc----------------
Q 042825 414 RNATNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTE----QGIAQFESEITVLTK---------------- 472 (631)
Q Consensus 414 ~~~t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~----~~~~~~~~Ei~~l~~---------------- 472 (631)
....++|...+.||+|+||.||+|+.. +++.||||++....... .....+.+|++++.+
T Consensus 27 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~ 106 (312)
T 2iwi_A 27 EAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDW 106 (312)
T ss_dssp ------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEE
T ss_pred hhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEE
Confidence 445678999999999999999999864 68999999997543221 122234556655532
Q ss_pred -----------------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC-------------------------CCcEE
Q 042825 473 -----------------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG-------------------------DDMRV 510 (631)
Q Consensus 473 -----------------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g-------------------------~~~kl 510 (631)
++|.+++.. ...+++.....++.+++.| +.+||
T Consensus 107 ~~~~~~~~~v~e~~~~~~~L~~~l~~-----~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~kl 181 (312)
T 2iwi_A 107 FETQEGFMLVLERPLPAQDLFDYITE-----KGPLGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDENILIDLRRGCAKL 181 (312)
T ss_dssp C-----CEEEEECCSSEEEHHHHHHH-----HCSCCHHHHHHHHHHHHHHHHHHHHHTEECCCCSGGGEEEETTTTEEEE
T ss_pred EecCCeEEEEEEecCCCCCHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChhhEEEeCCCCeEEE
Confidence 344444432 2357888888888888765 34789
Q ss_pred EeeccccccCCCCccccccccccCcccccccccccCCCC-chhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHhH
Q 042825 511 ADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRIT-AKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQ 589 (631)
Q Consensus 511 ~DFGla~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~-~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~~ 589 (631)
+|||+++..... ......||..|+|||++.+..+. .++|||||||++|||++|+.||... .........
T Consensus 182 ~dfg~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~------~~~~~~~~~ 251 (312)
T 2iwi_A 182 IDFGSGALLHDE----PYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERD------QEILEAELH 251 (312)
T ss_dssp CCCSSCEECCSS----CBCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSH------HHHHHTCCC
T ss_pred EEcchhhhcccC----cccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCCh------HHHhhhccC
Confidence 999999876422 23456799999999998877764 5899999999999999999999742 111111111
Q ss_pred hhhcCChhHHHHHHhhcCCChhhHHhHHHHHH
Q 042825 590 KMHKNHDTFQMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 590 ~~~~~~~~l~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
.....+.++.+++.+|+..||.+|+++.++++
T Consensus 252 ~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~ 283 (312)
T 2iwi_A 252 FPAHVSPDCCALIRRCLAPKPSSRPSLEEILL 283 (312)
T ss_dssp CCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred CcccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 11123568999999999999999999999876
|
| >2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.83 E-value=1.7e-21 Score=201.31 Aligned_cols=203 Identities=18% Similarity=0.276 Sum_probs=141.8
Q ss_pred hhcCCcccceeecCCCceEEEEEEecCCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc----------------------
Q 042825 415 NATNNFSEENRLGRGGVGTVYKGELKDGTEVGVKRMELGSVTEQGIAQFESEITVLTK---------------------- 472 (631)
Q Consensus 415 ~~t~~f~~~~~iG~G~fg~Vyk~~~~~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~---------------------- 472 (631)
-..++|...+.||+|+||.||+|+.+. .||||++..........+.+.+|++++.+
T Consensus 30 i~~~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~iv 107 (319)
T 2y4i_B 30 IPFEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAII 107 (319)
T ss_dssp SCCSCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEEE
T ss_pred CCHHHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEEE
Confidence 346789999999999999999999753 49999987554333334567788887765
Q ss_pred ------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC-----------------------CCcEEEeeccccccCCCC
Q 042825 473 ------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG-----------------------DDMRVADFGLVRLVPENG 523 (631)
Q Consensus 473 ------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g-----------------------~~~kl~DFGla~~~~~~~ 523 (631)
++|.+++. .....+++.....++.+++.| +.+||+|||+++......
T Consensus 108 ~e~~~~~~L~~~l~----~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~NIl~~~~~~~l~Dfg~~~~~~~~~ 183 (319)
T 2y4i_B 108 TSLCKGRTLYSVVR----DAKIVLDVNKTRQIAQEIVKGMGYLHAKGILHKDLKSKNVFYDNGKVVITDFGLFSISGVLQ 183 (319)
T ss_dssp CBCCCSEEHHHHTT----SSCCCCCSHHHHHHHHHHHHHHHHHHHTTCCCCCCCSTTEEEC--CCEECCCSCCC------
T ss_pred eecccCCcHHHHHH----hcCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChhhEEEeCCCEEEeecCCcccccccc
Confidence 34444442 223468888888888888876 457899999987653111
Q ss_pred ---ccccccccccCccccccccccc---------CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHhHhh
Q 042825 524 ---KHSILTKVAGTFGYLAPEYIVT---------GRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQKM 591 (631)
Q Consensus 524 ---~~~~~~~~~gt~~Y~aPE~~~~---------~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~~~~ 591 (631)
.........||+.|+|||++.. ..++.++|||||||++|||++|+.||....... ....+.......
T Consensus 184 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~-~~~~~~~~~~~~ 262 (319)
T 2y4i_B 184 AGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEA-IIWQMGTGMKPN 262 (319)
T ss_dssp ----CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHHH-HHHHHHTTCCCC
T ss_pred ccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHhccCCCCC
Confidence 1112334569999999999864 357899999999999999999999998643221 111111111111
Q ss_pred h---cCChhHHHHHHhhcCCChhhHHhHHHHHHHHH
Q 042825 592 H---KNHDTFQMAIDKTIQLDEENLANVSTVAELGD 624 (631)
Q Consensus 592 ~---~~~~~l~~~id~~L~~d~~~r~~~~~vl~lal 624 (631)
. ..+.++.+++..|+..||.+|+++.++++...
T Consensus 263 ~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~ 298 (319)
T 2y4i_B 263 LSQIGMGKEISDILLFCWAFEQEERPTFTKLMDMLE 298 (319)
T ss_dssp CCCSSCCTTHHHHHHHHHCSSTTTSCCHHHHHHHHT
T ss_pred CCcCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHH
Confidence 1 12468999999999999999999999987643
|
| >2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=2.2e-20 Score=201.88 Aligned_cols=196 Identities=22% Similarity=0.269 Sum_probs=127.2
Q ss_pred CCcccceeecCCCceEEEEEEecCCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc-------------------------
Q 042825 418 NNFSEENRLGRGGVGTVYKGELKDGTEVGVKRMELGSVTEQGIAQFESEITVLTK------------------------- 472 (631)
Q Consensus 418 ~~f~~~~~iG~G~fg~Vyk~~~~~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~------------------------- 472 (631)
+.|...++||+|+||+||.+...+|+.||||++... ..+.+.+|++++.+
T Consensus 15 ~~~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~-----~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E 89 (434)
T 2rio_A 15 NLVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLID-----FCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALE 89 (434)
T ss_dssp SCEEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGG-----GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEEC
T ss_pred heeeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHH-----HHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEe
Confidence 345557889999999998776667999999998753 23457788887754
Q ss_pred ---CChhHHhHhhhhcC--CCCCCHHHHHHHHHHhhcC----------------------C---------------CcEE
Q 042825 473 ---GTLGRHLFNWEEEG--LEPLEWNTRLNIALDVARG----------------------D---------------DMRV 510 (631)
Q Consensus 473 ---gsL~~~L~~~~~~~--~~~L~~~~~~~I~~~ia~g----------------------~---------------~~kl 510 (631)
|+|.+++....... .....+.....|+.+++.| . .+||
T Consensus 90 ~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL 169 (434)
T 2rio_A 90 LCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILI 169 (434)
T ss_dssp CCSEEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEE
T ss_pred cCCCCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHCCccccCCChHhEEEecCcccccccccCCCceEEEE
Confidence 55666654311100 0111222334566666654 1 4789
Q ss_pred EeeccccccCCCCcc--ccccccccCccccccccccc-------CCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChHH
Q 042825 511 ADFGLVRLVPENGKH--SILTKVAGTFGYLAPEYIVT-------GRITAKVDVYSFGMILMDLIT-GRKVVDATHSDPEY 580 (631)
Q Consensus 511 ~DFGla~~~~~~~~~--~~~~~~~gt~~Y~aPE~~~~-------~~~~~k~DVwS~GvvL~Ellt-G~~P~~~~~~~~~~ 580 (631)
+|||+++........ .......||++|+|||++.+ ..++.++|||||||++|||+| |+.||......
T Consensus 170 ~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~--- 246 (434)
T 2rio_A 170 SDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSR--- 246 (434)
T ss_dssp CCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTH---
T ss_pred cccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhh---
Confidence 999999987532211 12234679999999999865 568999999999999999999 99999754332
Q ss_pred HHHHHHHhHhhhc--------CChhHHHHHHhhcCCChhhHHhHHHHHH
Q 042825 581 IIHLATWFQKMHK--------NHDTFQMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 581 ~~~l~~~~~~~~~--------~~~~l~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
...+......... .+.++.+++.+||..||.+|+++.++++
T Consensus 247 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 295 (434)
T 2rio_A 247 ESNIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLR 295 (434)
T ss_dssp HHHHHHTCCCCCCCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HHHHhcCCCCcccccccccccchHHHHHHHHHHhhCChhhCCCHHHHHh
Confidence 1222221100000 0256899999999999999999998875
|
| >1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A | Back alignment and structure |
|---|
Probab=99.81 E-value=5.2e-20 Score=188.18 Aligned_cols=192 Identities=21% Similarity=0.311 Sum_probs=132.0
Q ss_pred hcCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc----------------------
Q 042825 416 ATNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK---------------------- 472 (631)
Q Consensus 416 ~t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~---------------------- 472 (631)
..++|+..+.||+|+||.||+|+.. +|+.||||++... ....+.+.+|++++.+
T Consensus 4 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 80 (303)
T 1zy4_A 4 YASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT---EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKP 80 (303)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE---HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC-
T ss_pred ccccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc---HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhh
Confidence 3457899999999999999999975 6999999999653 3456788999998865
Q ss_pred -------------------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcE
Q 042825 473 -------------------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMR 509 (631)
Q Consensus 473 -------------------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~k 509 (631)
|+|.+++.. ....+++.....++.+++.| +.+|
T Consensus 81 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dlkp~Nil~~~~~~~k 156 (303)
T 1zy4_A 81 MTAVKKKSTLFIQMEYCENGTLYDLIHS----ENLNQQRDEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVK 156 (303)
T ss_dssp -----CEEEEEEEEECCCSCBHHHHHHH----SCGGGCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEE
T ss_pred hcccccCCceEEEEecCCCCCHHHhhhc----cccccchHHHHHHHHHHHHHHHHHHhCCeecccCCHHhEEEcCCCCEE
Confidence 244444431 22346677777788777765 5678
Q ss_pred EEeeccccccCCCCc------------cccccccccCcccccccccccC-CCCchhhHHHHHHHHHHHHcCCCCCCCCCC
Q 042825 510 VADFGLVRLVPENGK------------HSILTKVAGTFGYLAPEYIVTG-RITAKVDVYSFGMILMDLITGRKVVDATHS 576 (631)
Q Consensus 510 l~DFGla~~~~~~~~------------~~~~~~~~gt~~Y~aPE~~~~~-~~~~k~DVwS~GvvL~ElltG~~P~~~~~~ 576 (631)
|+|||+++....... ........||..|+|||++.+. .++.++|||||||++|||++ ||....
T Consensus 157 l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~~- 232 (303)
T 1zy4_A 157 IGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGM- 232 (303)
T ss_dssp ECCCCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSHH-
T ss_pred EeeCcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCch-
Confidence 999999987632110 1123346799999999998764 68999999999999999998 554211
Q ss_pred ChHHHHHHHHHhHhh-------h--cCChhHHHHHHhhcCCChhhHHhHHHHHH
Q 042825 577 DPEYIIHLATWFQKM-------H--KNHDTFQMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 577 ~~~~~~~l~~~~~~~-------~--~~~~~l~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
....+....... . .....+.+++.+||..||.+|+++.++++
T Consensus 233 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 283 (303)
T 1zy4_A 233 ---ERVNILKKLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLN 283 (303)
T ss_dssp ---HHHHHHHHHHSTTCCCCTTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred ---hHHHHHHhccccccccCccccccchHHHHHHHHHHHhcCcccCcCHHHHhC
Confidence 111111111110 0 11245899999999999999999999875
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.80 E-value=8.6e-20 Score=189.72 Aligned_cols=156 Identities=16% Similarity=0.185 Sum_probs=116.7
Q ss_pred CCeEEEEeCCCCCcccCcchhcCCccCceeecccCcccCCCCcCc------------ccccccccccccceecCCCCCCc
Q 042825 97 GQVTNIELQDQNRKGTVPPILKKLSSMAVMYLENNQLRGPIPSLV------------GSLEFFSAYEANISGTIPDFIGT 164 (631)
Q Consensus 97 ~~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~L~~N~l~g~lP~~~------------~~L~~L~l~~n~l~g~ip~~~~~ 164 (631)
.+++.|+|++|.++ .+|..++++++|++|+|++|++.+.+|..+ .+|+.|++++|+++ .+|..++
T Consensus 127 ~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~- 203 (328)
T 4fcg_A 127 AGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIR-SLPASIA- 203 (328)
T ss_dssp TTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCC-CCCGGGG-
T ss_pred CCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCCCCccccChhHhhccchhhhccCCCCCEEECcCCCcC-cchHhhc-
Confidence 46778888888887 778788888888888888877777777653 36788888888887 7777776
Q ss_pred CCCCCCcEEEccCCcccccCCCCCCCCccCcCCCCCCCEEEeecCcCcccCChhhccCCCCCCEEEccCCCCcccCCCCC
Q 042825 165 DTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNNLLQGPTPRFN 244 (631)
Q Consensus 165 ~~l~~L~~L~Ls~N~l~g~iP~~~~~~~~~~~~l~~L~~L~L~~N~l~g~iP~~~~~~l~~L~~L~ls~N~l~g~~p~~~ 244 (631)
.+++|++|+|++|+++ .+|+. ++++++|++|+|++|++.+.+|.. ++.+++|+.|+|++|.+.+.+|...
T Consensus 204 -~l~~L~~L~L~~N~l~-~l~~~-------l~~l~~L~~L~Ls~n~~~~~~p~~-~~~l~~L~~L~L~~n~~~~~~p~~~ 273 (328)
T 4fcg_A 204 -NLQNLKSLKIRNSPLS-ALGPA-------IHHLPKLEELDLRGCTALRNYPPI-FGGRAPLKRLILKDCSNLLTLPLDI 273 (328)
T ss_dssp -GCTTCCEEEEESSCCC-CCCGG-------GGGCTTCCEEECTTCTTCCBCCCC-TTCCCCCCEEECTTCTTCCBCCTTG
T ss_pred -CCCCCCEEEccCCCCC-cCchh-------hccCCCCCEEECcCCcchhhhHHH-hcCCCCCCEEECCCCCchhhcchhh
Confidence 7778888888888887 46644 347788888888888888888764 7788888888888888888777543
Q ss_pred C-CCceEEeecCCCcccCCCCC
Q 042825 245 N-SKLTVDMRTGSNCFCLDDPG 265 (631)
Q Consensus 245 ~-~~~~~~l~~~~n~~~~~~~~ 265 (631)
. +.....+++++|++.+.+|.
T Consensus 274 ~~l~~L~~L~L~~n~~~~~iP~ 295 (328)
T 4fcg_A 274 HRLTQLEKLDLRGCVNLSRLPS 295 (328)
T ss_dssp GGCTTCCEEECTTCTTCCCCCG
T ss_pred hcCCCCCEEeCCCCCchhhccH
Confidence 2 33445566788887777764
|
| >3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.80 E-value=1.3e-20 Score=203.44 Aligned_cols=195 Identities=21% Similarity=0.258 Sum_probs=125.4
Q ss_pred hcCCcccceeecCCCceEEEEEEecCCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc-----------------------
Q 042825 416 ATNNFSEENRLGRGGVGTVYKGELKDGTEVGVKRMELGSVTEQGIAQFESEITVLTK----------------------- 472 (631)
Q Consensus 416 ~t~~f~~~~~iG~G~fg~Vyk~~~~~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~----------------------- 472 (631)
...+|...++||+|+||+||.....+|+.||||++..... ..+.+|++++.+
T Consensus 22 ~~~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~-----~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv 96 (432)
T 3p23_A 22 GKISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECF-----SFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIA 96 (432)
T ss_dssp TTEEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTE-----EECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEE
T ss_pred ccEEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHH-----HHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEE
Confidence 3456889999999999997655556799999999975432 224567777654
Q ss_pred -----CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC-----------------------------CCcEEEeeccccc
Q 042825 473 -----GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG-----------------------------DDMRVADFGLVRL 518 (631)
Q Consensus 473 -----gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g-----------------------------~~~kl~DFGla~~ 518 (631)
|+|.+++.. ....+.+.....++.+++.| ..+||+|||+++.
T Consensus 97 ~E~~~g~L~~~l~~----~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~ 172 (432)
T 3p23_A 97 IELCAATLQEYVEQ----KDFAHLGLEPITLLQQTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKK 172 (432)
T ss_dssp EECCSEEHHHHHHS----SSCCCCSSCHHHHHHHHHHHHHHHHHTTCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEEC
T ss_pred EECCCCCHHHHHHh----cCCCccchhHHHHHHHHHHHHHHHHHCcCEeCCCCHHHEEEecCCCCCceeEEEecccceee
Confidence 455555532 11222333334555555544 1356999999987
Q ss_pred cCCCCcc-ccccccccCcccccccccc---cCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChHHHHHHHH-HhHhhh
Q 042825 519 VPENGKH-SILTKVAGTFGYLAPEYIV---TGRITAKVDVYSFGMILMDLIT-GRKVVDATHSDPEYIIHLAT-WFQKMH 592 (631)
Q Consensus 519 ~~~~~~~-~~~~~~~gt~~Y~aPE~~~---~~~~~~k~DVwS~GvvL~Ellt-G~~P~~~~~~~~~~~~~l~~-~~~~~~ 592 (631)
....... .......||++|+|||++. ...++.++|||||||++|||+| |+.||...... ....+.. +.....
T Consensus 173 ~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~--~~~~~~~~~~~~~~ 250 (432)
T 3p23_A 173 LAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQR--QANILLGACSLDCL 250 (432)
T ss_dssp C------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTH--HHHHHTTCCCCTTS
T ss_pred ccCCCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHH--HHHHHhccCCcccc
Confidence 6422211 2234578999999999997 4567889999999999999999 99999654322 1111110 000000
Q ss_pred c----CChhHHHHHHhhcCCChhhHHhHHHHHH
Q 042825 593 K----NHDTFQMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 593 ~----~~~~l~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
. .+..+.+++.+||..||.+|+++.++++
T Consensus 251 ~~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~ 283 (432)
T 3p23_A 251 HPEKHEDVIARELIEKMIAMDPQKRPSAKHVLK 283 (432)
T ss_dssp CTTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred CccccccHHHHHHHHHHHhCCHhhCCCHHHHHh
Confidence 0 0134789999999999999999998874
|
| >3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A | Back alignment and structure |
|---|
Probab=99.80 E-value=6e-19 Score=176.08 Aligned_cols=155 Identities=22% Similarity=0.304 Sum_probs=128.3
Q ss_pred CeEEEEeCCCCCcccCcchhcCCccCceeecccCcccCCCCcCcc---cccccccccccceecCCCCCCcCCCCCCcEEE
Q 042825 98 QVTNIELQDQNRKGTVPPILKKLSSMAVMYLENNQLRGPIPSLVG---SLEFFSAYEANISGTIPDFIGTDTFPQLSYLD 174 (631)
Q Consensus 98 ~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~L~~N~l~g~lP~~~~---~L~~L~l~~n~l~g~ip~~~~~~~l~~L~~L~ 174 (631)
.++.|+|++|++++..|..|.++++|++|+|++|+|++..|..+. +|+.|++++|++++..|..+. .+++|++|+
T Consensus 36 ~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~--~l~~L~~L~ 113 (251)
T 3m19_A 36 DTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFD--HLTQLDKLY 113 (251)
T ss_dssp TCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTT--TCTTCCEEE
T ss_pred CCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECCCCcccccChhHhc--ccCCCCEEE
Confidence 688999999999988888899999999999999999987776554 899999999999976667777 789999999
Q ss_pred ccCCcccccCCCCCCCCccCcCCCCCCCEEEeecCcCcccCChhhccCCCCCCEEEccCCCCcccCCCCC-CCCceEEee
Q 042825 175 LGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNNLLQGPTPRFN-NSKLTVDMR 253 (631)
Q Consensus 175 Ls~N~l~g~iP~~~~~~~~~~~~l~~L~~L~L~~N~l~g~iP~~~~~~l~~L~~L~ls~N~l~g~~p~~~-~~~~~~~l~ 253 (631)
|++|+|+ .+|+.. +.++++|++|+|++|+|++ +|...|..+++|+.|+|++|+|++.+|... .......++
T Consensus 114 L~~N~l~-~~~~~~------~~~l~~L~~L~Ls~N~l~~-~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 185 (251)
T 3m19_A 114 LGGNQLK-SLPSGV------FDRLTKLKELRLNTNQLQS-IPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTIT 185 (251)
T ss_dssp CCSSCCC-CCCTTT------TTTCTTCCEEECCSSCCCC-CCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEE
T ss_pred cCCCcCC-CcChhH------hccCCcccEEECcCCcCCc-cCHHHcCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEEE
Confidence 9999999 555442 4589999999999999994 555558899999999999999998887543 334455677
Q ss_pred cCCCcccCC
Q 042825 254 TGSNCFCLD 262 (631)
Q Consensus 254 ~~~n~~~~~ 262 (631)
+++|.+...
T Consensus 186 l~~N~~~c~ 194 (251)
T 3m19_A 186 LFGNQFDCS 194 (251)
T ss_dssp CCSCCBCTT
T ss_pred eeCCceeCC
Confidence 899998763
|
| >3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus} | Back alignment and structure |
|---|
Probab=99.78 E-value=6.9e-19 Score=173.18 Aligned_cols=157 Identities=23% Similarity=0.316 Sum_probs=75.8
Q ss_pred CCCCCCCCCccceeeCCCCCeEEEEeCCCCCcccCcchhcCCccCceeecccCcccCCCCcCcc---cccccccccccce
Q 042825 79 KWSDPDPCQWSHVICSDDGQVTNIELQDQNRKGTVPPILKKLSSMAVMYLENNQLRGPIPSLVG---SLEFFSAYEANIS 155 (631)
Q Consensus 79 ~w~~~~~C~w~gv~C~~~~~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~L~~N~l~g~lP~~~~---~L~~L~l~~n~l~ 155 (631)
.|.+...|+|.+|.|... +++ .+|..+. ++|++|+|++|+|++..|..+. +|+.|+|++|+++
T Consensus 12 ~~~~~~~Cs~~~v~c~~~-----------~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~ 77 (229)
T 3e6j_A 12 ACPSQCSCSGTTVDCRSK-----------RHA-SVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLG 77 (229)
T ss_dssp CCCTTCEEETTEEECTTS-----------CCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC
T ss_pred cCCCCCEEeCCEeEccCC-----------CcC-ccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCC
Confidence 356778899999999532 122 3333222 4455555555555544443332 4455555555554
Q ss_pred ecCCCCCCcCCCCCCcEEEccCCcccccCCCCCCCCccCcCCCCCCCEEEeecCcCcccCChhhccCCCCCCEEEccCCC
Q 042825 156 GTIPDFIGTDTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNNL 235 (631)
Q Consensus 156 g~ip~~~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~~~~~~~~l~~L~~L~L~~N~l~g~iP~~~~~~l~~L~~L~ls~N~ 235 (631)
+..+..+. .+++|++|+|++|+|+ .+|... +..+++|++|+|++|+|+ .+|.. +..+++|++|+|++|+
T Consensus 78 ~i~~~~~~--~l~~L~~L~Ls~N~l~-~l~~~~------~~~l~~L~~L~Ls~N~l~-~lp~~-~~~l~~L~~L~L~~N~ 146 (229)
T 3e6j_A 78 ALPVGVFD--SLTQLTVLDLGTNQLT-VLPSAV------FDRLVHLKELFMCCNKLT-ELPRG-IERLTHLTHLALDQNQ 146 (229)
T ss_dssp CCCTTTTT--TCTTCCEEECCSSCCC-CCCTTT------TTTCTTCCEEECCSSCCC-SCCTT-GGGCTTCSEEECCSSC
T ss_pred CcChhhcc--cCCCcCEEECCCCcCC-ccChhH------hCcchhhCeEeccCCccc-ccCcc-cccCCCCCEEECCCCc
Confidence 22222333 4555555555555555 333221 234555555555555555 45543 4555555555555555
Q ss_pred CcccCCCCCC-CCceEEeecCCCccc
Q 042825 236 LQGPTPRFNN-SKLTVDMRTGSNCFC 260 (631)
Q Consensus 236 l~g~~p~~~~-~~~~~~l~~~~n~~~ 260 (631)
|++..+.... ......+++++|.+.
T Consensus 147 l~~~~~~~~~~l~~L~~L~l~~N~~~ 172 (229)
T 3e6j_A 147 LKSIPHGAFDRLSSLTHAYLFGNPWD 172 (229)
T ss_dssp CCCCCTTTTTTCTTCCEEECTTSCBC
T ss_pred CCccCHHHHhCCCCCCEEEeeCCCcc
Confidence 5544443221 222333444555443
|
| >2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.77 E-value=7.6e-19 Score=170.01 Aligned_cols=164 Identities=23% Similarity=0.333 Sum_probs=128.2
Q ss_pred CCccceeeCCC----------CCeEEEEeCCCCCcccCcchhcCCccCceeecccCcccCCCCcCcc---cccccccccc
Q 042825 86 CQWSHVICSDD----------GQVTNIELQDQNRKGTVPPILKKLSSMAVMYLENNQLRGPIPSLVG---SLEFFSAYEA 152 (631)
Q Consensus 86 C~w~gv~C~~~----------~~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~L~~N~l~g~lP~~~~---~L~~L~l~~n 152 (631)
|.|.+|.|... .+++.|+|++|++++..+..+.++++|++|+|++|+|++..+..+. +|++|++++|
T Consensus 7 C~~~~v~c~~~~l~~~p~~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n 86 (208)
T 2o6s_A 7 CSGTTVECYSQGRTSVPTGIPAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTN 86 (208)
T ss_dssp EETTEEECCSSCCSSCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred ECCCEEEecCCCccCCCCCCCCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCC
Confidence 67999999642 3688999999999966666688999999999999999854444443 8999999999
Q ss_pred cceecCCCCCCcCCCCCCcEEEccCCcccccCCCCCCCCccCcCCCCCCCEEEeecCcCcccCChhhccCCCCCCEEEcc
Q 042825 153 NISGTIPDFIGTDTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLT 232 (631)
Q Consensus 153 ~l~g~ip~~~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~~~~~~~~l~~L~~L~L~~N~l~g~iP~~~~~~l~~L~~L~ls 232 (631)
++++..+..+. .+++|++|+|++|+++ .+|+.. +.++++|++|+|++|++++ +|...+..+++|+.|+++
T Consensus 87 ~l~~~~~~~~~--~l~~L~~L~L~~N~l~-~~~~~~------~~~l~~L~~L~l~~N~l~~-~~~~~~~~l~~L~~L~l~ 156 (208)
T 2o6s_A 87 QLQSLPNGVFD--KLTQLKELALNTNQLQ-SLPDGV------FDKLTQLKDLRLYQNQLKS-VPDGVFDRLTSLQYIWLH 156 (208)
T ss_dssp CCCCCCTTTTT--TCTTCCEEECCSSCCC-CCCTTT------TTTCTTCCEEECCSSCCSC-CCTTTTTTCTTCCEEECC
T ss_pred cCCccCHhHhc--CccCCCEEEcCCCcCc-ccCHhH------hccCCcCCEEECCCCccce-eCHHHhccCCCccEEEec
Confidence 99865555566 7889999999999998 455432 4588999999999999994 555558889999999999
Q ss_pred CCCCcccCCCCCCCCceEEeecCCCcccCCCCC
Q 042825 233 NNLLQGPTPRFNNSKLTVDMRTGSNCFCLDDPG 265 (631)
Q Consensus 233 ~N~l~g~~p~~~~~~~~~~l~~~~n~~~~~~~~ 265 (631)
+|.+.+..|.. ..+++..|.+.|.+|.
T Consensus 157 ~N~~~~~~~~l------~~L~~~~n~~~g~ip~ 183 (208)
T 2o6s_A 157 DNPWDCTCPGI------RYLSEWINKHSGVVRN 183 (208)
T ss_dssp SCCBCCCTTTT------HHHHHHHHHCTTTBBC
T ss_pred CCCeecCCCCH------HHHHHHHHhCCceeec
Confidence 99988877643 2234577888887765
|
| >2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.77 E-value=2.9e-19 Score=204.14 Aligned_cols=191 Identities=18% Similarity=0.238 Sum_probs=137.5
Q ss_pred cCCcccceeecCCCceEEEEEEec--CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhcCChhH-----------------
Q 042825 417 TNNFSEENRLGRGGVGTVYKGELK--DGTEVGVKRMELGSVTEQGIAQFESEITVLTKGTLGR----------------- 477 (631)
Q Consensus 417 t~~f~~~~~iG~G~fg~Vyk~~~~--~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~gsL~~----------------- 477 (631)
.++|...+.||+|+||+||+|+.. +|+.||||++.... .....+.|.+|++++.+-....
T Consensus 79 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~ 157 (681)
T 2pzi_A 79 AGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSG-DAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDP 157 (681)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSC-CHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCE
T ss_pred CCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccC-CHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCc
Confidence 468999999999999999999975 58999999986542 3445678899999987611100
Q ss_pred --H-hHhhhh------cCCCCCCHHHHHHHHHHhhcC-----------------------CCcEEEeeccccccCCCCcc
Q 042825 478 --H-LFNWEE------EGLEPLEWNTRLNIALDVARG-----------------------DDMRVADFGLVRLVPENGKH 525 (631)
Q Consensus 478 --~-L~~~~~------~~~~~L~~~~~~~I~~~ia~g-----------------------~~~kl~DFGla~~~~~~~~~ 525 (631)
+ +.++.. .....++|.+...|+.+++.| +.+||+|||+++.....
T Consensus 158 ~~~lv~E~~~g~~L~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~giiHrDlkp~NIll~~~~~kl~DFG~a~~~~~~--- 234 (681)
T 2pzi_A 158 VGYIVMEYVGGQSLKRSKGQKLPVAEAIAYLLEILPALSYLHSIGLVYNDLKPENIMLTEEQLKLIDLGAVSRINSF--- 234 (681)
T ss_dssp EEEEEEECCCCEECC----CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECSSCEEECCCTTCEETTCC---
T ss_pred eeEEEEEeCCCCcHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccChHHeEEeCCcEEEEecccchhcccC---
Confidence 1 111110 011368999999999998876 56789999999876421
Q ss_pred ccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHhHhhhcCChhHHHHHHhh
Q 042825 526 SILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQKMHKNHDTFQMAIDKT 605 (631)
Q Consensus 526 ~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~id~~ 605 (631)
....||++|+|||++.+. ++.++|||||||++|||++|..||.+...... .... ......+.+.++|.+|
T Consensus 235 ---~~~~gt~~y~aPE~~~~~-~~~~sDi~slG~~l~~l~~g~~~~~~~~~~~~-----~~~~-~~~~~~~~l~~li~~~ 304 (681)
T 2pzi_A 235 ---GYLYGTPGFQAPEIVRTG-PTVATDIYTVGRTLAALTLDLPTRNGRYVDGL-----PEDD-PVLKTYDSYGRLLRRA 304 (681)
T ss_dssp ---SCCCCCTTTSCTTHHHHC-SCHHHHHHHHHHHHHHHHSCCCEETTEECSSC-----CTTC-HHHHHCHHHHHHHHHH
T ss_pred ---CccCCCccccCHHHHcCC-CCCceehhhhHHHHHHHHhCCCCCcccccccc-----cccc-cccccCHHHHHHHhhh
Confidence 346799999999998765 48999999999999999999999864322100 0000 0011235789999999
Q ss_pred cCCChhhHHhHHHHHH
Q 042825 606 IQLDEENLANVSTVAE 621 (631)
Q Consensus 606 L~~d~~~r~~~~~vl~ 621 (631)
|..||.+|++..+.+.
T Consensus 305 l~~dP~~R~~~~~~l~ 320 (681)
T 2pzi_A 305 IDPDPRQRFTTAEEMS 320 (681)
T ss_dssp TCSSGGGSCSSHHHHH
T ss_pred ccCChhhCCCHHHHHH
Confidence 9999999986555444
|
| >3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* | Back alignment and structure |
|---|
Probab=99.76 E-value=1.2e-19 Score=203.19 Aligned_cols=197 Identities=20% Similarity=0.316 Sum_probs=135.5
Q ss_pred cCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc-----------------------
Q 042825 417 TNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK----------------------- 472 (631)
Q Consensus 417 t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~----------------------- 472 (631)
.++|...+.||+|+||.||+|+.. +|+.||||++... ......+++.+|++++.+
T Consensus 13 ~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~-~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~ 91 (676)
T 3qa8_A 13 CGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQE-LSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPND 91 (676)
T ss_dssp ----CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSC-CCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTS
T ss_pred CCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEeccc-CCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCC
Confidence 367999999999999999999975 5899999998754 345567789999999875
Q ss_pred -----------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CC---cEEEeec
Q 042825 473 -----------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DD---MRVADFG 514 (631)
Q Consensus 473 -----------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~---~kl~DFG 514 (631)
|+|.+++... .....+++.....|+.+++.| +. +||+|||
T Consensus 92 ~~~LVmEy~~ggsL~~~L~~~--~~~~~lse~~i~~I~~QLl~aL~yLHs~gIVHrDLKP~NILl~~~g~~~~vKL~DFG 169 (676)
T 3qa8_A 92 LPLLAMEYCEGGDLRKYLNQF--ENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLG 169 (676)
T ss_dssp SCCCEEECCSSCBHHHHHHSS--SCTTCCCSSHHHHHHHHHHHHHHHHHHTTBCCCCCCSTTEEEECCSSSCEEEECSCC
T ss_pred eEEEEEEeCCCCCHHHHHHhc--ccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEeecCCCceeEEEcccc
Confidence 3455444321 112257777778888777765 12 6899999
Q ss_pred cccccCCCCccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChH--------HHHHHH-
Q 042825 515 LVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPE--------YIIHLA- 585 (631)
Q Consensus 515 la~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~--------~~~~l~- 585 (631)
+++...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||........ ......
T Consensus 170 ~a~~~~~~~---~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~~~~~~~i~~~~~~~~~~ 246 (676)
T 3qa8_A 170 YAKELDQGE---LCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHIVV 246 (676)
T ss_dssp CCCBTTSCC---CCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHHHHSSTTCC------CCS
T ss_pred ccccccccc---ccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccchhhhhhhhhcccchhhhh
Confidence 998764222 23456899999999999999999999999999999999999999975311000 000000
Q ss_pred --------HHhHhhh-------cCChhHHHHHHhhcCCChhhHHhHHHH
Q 042825 586 --------TWFQKMH-------KNHDTFQMAIDKTIQLDEENLANVSTV 619 (631)
Q Consensus 586 --------~~~~~~~-------~~~~~l~~~id~~L~~d~~~r~~~~~v 619 (631)
.|..... ..++.+.+++..+|..||.+|+++.++
T Consensus 247 ~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~el 295 (676)
T 3qa8_A 247 YDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQN 295 (676)
T ss_dssp CCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTC
T ss_pred hhhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHH
Confidence 0000000 012568999999999999999988653
|
| >2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.76 E-value=6.3e-18 Score=170.52 Aligned_cols=168 Identities=20% Similarity=0.328 Sum_probs=78.2
Q ss_pred CCCCCccceeeCCCCCeEEEEeCC---------------------CCCcccCcchhcCCccCceeecccCcccCCCCc-C
Q 042825 83 PDPCQWSHVICSDDGQVTNIELQD---------------------QNRKGTVPPILKKLSSMAVMYLENNQLRGPIPS-L 140 (631)
Q Consensus 83 ~~~C~w~gv~C~~~~~l~~l~l~~---------------------n~l~g~ip~~~~~l~~L~~L~L~~N~l~g~lP~-~ 140 (631)
.+.|.|.|+.|...++++.+++++ |++++..+..|.++++|++|+|++|+++. +|. .
T Consensus 2 ~~~C~~~~~~C~c~~~~~~l~~~~~~l~~ip~~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~-i~~~~ 80 (270)
T 2o6q_A 2 EALCKKDGGVCSCNNNKNSVDCSSKKLTAIPSNIPADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQT-LPAGI 80 (270)
T ss_dssp CCCBGGGTCSBEEETTTTEEECTTSCCSSCCSCCCTTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSC-CCTTT
T ss_pred CccCCCCCCCCEeCCCCCEEEccCCCCCccCCCCCCCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCe-eChhh
Confidence 367888887774333344444444 44443333344455555555555555542 222 1
Q ss_pred c---ccccccccccccceecCCCCCCcCCCCCCcEEEccCCcccccCCCCCCCCccCcCCCCCCCEEEeecCcCcccCCh
Q 042825 141 V---GSLEFFSAYEANISGTIPDFIGTDTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPV 217 (631)
Q Consensus 141 ~---~~L~~L~l~~n~l~g~ip~~~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~~~~~~~~l~~L~~L~L~~N~l~g~iP~ 217 (631)
+ .+|+.|++++|++++..+..+. .+++|++|+|++|++++..|.. ++++++|++|+|++|+++ .+|.
T Consensus 81 ~~~l~~L~~L~l~~n~l~~~~~~~~~--~l~~L~~L~l~~n~l~~~~~~~-------~~~l~~L~~L~Ls~n~l~-~~~~ 150 (270)
T 2o6q_A 81 FKELKNLETLWVTDNKLQALPIGVFD--QLVNLAELRLDRNQLKSLPPRV-------FDSLTKLTYLSLGYNELQ-SLPK 150 (270)
T ss_dssp TSSCTTCCEEECCSSCCCCCCTTTTT--TCSSCCEEECCSSCCCCCCTTT-------TTTCTTCCEEECCSSCCC-CCCT
T ss_pred hcCCCCCCEEECCCCcCCcCCHhHcc--cccCCCEEECCCCccCeeCHHH-------hCcCcCCCEEECCCCcCC-ccCH
Confidence 1 2455555555555433333333 4445555555555554222211 234555555555555555 2333
Q ss_pred hhccCCCCCCEEEccCCCCcccCCCC-CCCCceEEeecCCCcccC
Q 042825 218 SSFNNHPKLTTLNLTNNLLQGPTPRF-NNSKLTVDMRTGSNCFCL 261 (631)
Q Consensus 218 ~~~~~l~~L~~L~ls~N~l~g~~p~~-~~~~~~~~l~~~~n~~~~ 261 (631)
..|..+++|+.|+|++|.+++..+.. ........+++++|.+..
T Consensus 151 ~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 195 (270)
T 2o6q_A 151 GVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKR 195 (270)
T ss_dssp TTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSC
T ss_pred hHccCCcccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCc
Confidence 33455555555555555555544432 222233334445555443
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} | Back alignment and structure |
|---|
Probab=99.76 E-value=6.1e-19 Score=199.84 Aligned_cols=155 Identities=21% Similarity=0.328 Sum_probs=108.3
Q ss_pred CCeEEEEeCCCCCcccCcchhcCCccCceeecccCc-ccC-CCCcCc---------ccccccccccccceecCCC--CCC
Q 042825 97 GQVTNIELQDQNRKGTVPPILKKLSSMAVMYLENNQ-LRG-PIPSLV---------GSLEFFSAYEANISGTIPD--FIG 163 (631)
Q Consensus 97 ~~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~L~~N~-l~g-~lP~~~---------~~L~~L~l~~n~l~g~ip~--~~~ 163 (631)
.+++.|+|++|.+.|.+|..|+++++|++|+|++|+ |+| .+|..+ .+|+.|++++|+++ .+|. .++
T Consensus 249 ~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~ 327 (636)
T 4eco_A 249 KDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQ 327 (636)
T ss_dssp TTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHT
T ss_pred CCCCEEEecCCcCCccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhc
Confidence 467778888888888888778888888888888887 777 777654 46777888888877 7777 676
Q ss_pred cCCCCCCcEEEccCCcccccCCCCCCCCccCcCCCCCCCEEEeecCcCcccCChhhccCCCC-CCEEEccCCCCcccCCC
Q 042825 164 TDTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPK-LTTLNLTNNLLQGPTPR 242 (631)
Q Consensus 164 ~~~l~~L~~L~Ls~N~l~g~iP~~~~~~~~~~~~l~~L~~L~L~~N~l~g~iP~~~~~~l~~-L~~L~ls~N~l~g~~p~ 242 (631)
.+++|++|+|++|+++|.+| .+ +++++|++|+|++|+++ .+|.. +..+++ |+.|++++|.++ .+|.
T Consensus 328 --~l~~L~~L~L~~N~l~g~ip-~~-------~~l~~L~~L~L~~N~l~-~lp~~-l~~l~~~L~~L~Ls~N~l~-~lp~ 394 (636)
T 4eco_A 328 --KMKKLGMLECLYNQLEGKLP-AF-------GSEIKLASLNLAYNQIT-EIPAN-FCGFTEQVENLSFAHNKLK-YIPN 394 (636)
T ss_dssp --TCTTCCEEECCSCCCEEECC-CC-------EEEEEESEEECCSSEEE-ECCTT-SEEECTTCCEEECCSSCCS-SCCS
T ss_pred --cCCCCCEEeCcCCcCccchh-hh-------CCCCCCCEEECCCCccc-cccHh-hhhhcccCcEEEccCCcCc-ccch
Confidence 67788888888888887777 54 36667777777777777 66654 666666 777777777776 4554
Q ss_pred CCCC-C--ceEEeecCCCcccCCCCC
Q 042825 243 FNNS-K--LTVDMRTGSNCFCLDDPG 265 (631)
Q Consensus 243 ~~~~-~--~~~~l~~~~n~~~~~~~~ 265 (631)
.... . ....+++++|.+++..|.
T Consensus 395 ~~~~~~l~~L~~L~Ls~N~l~~~~p~ 420 (636)
T 4eco_A 395 IFDAKSVSVMSAIDFSYNEIGSVDGK 420 (636)
T ss_dssp CCCTTCSSCEEEEECCSSCTTTTTTC
T ss_pred hhhhcccCccCEEECcCCcCCCcchh
Confidence 3322 1 344566677776665543
|
| >1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A* | Back alignment and structure |
|---|
Probab=99.76 E-value=6.5e-18 Score=171.70 Aligned_cols=155 Identities=19% Similarity=0.307 Sum_probs=117.2
Q ss_pred CCeEEEEeCCCC-CcccCcchhcCCccCceeecccCcccCCCCcCcc---cccccccccccceecCCCCCCcCCCCCCcE
Q 042825 97 GQVTNIELQDQN-RKGTVPPILKKLSSMAVMYLENNQLRGPIPSLVG---SLEFFSAYEANISGTIPDFIGTDTFPQLSY 172 (631)
Q Consensus 97 ~~l~~l~l~~n~-l~g~ip~~~~~l~~L~~L~L~~N~l~g~lP~~~~---~L~~L~l~~n~l~g~ip~~~~~~~l~~L~~ 172 (631)
.+++.|+|++|. +....|..+..+++|++|+|++|.+++..|..+. +|+.|++++|++++..+..++ .+++|++
T Consensus 80 ~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~--~l~~L~~ 157 (285)
T 1ozn_A 80 ALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFR--DLGNLTH 157 (285)
T ss_dssp TTCCEEECCSCTTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTT--TCTTCCE
T ss_pred cCCCEEeCCCCCCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhc--cCCCccE
Confidence 468888888887 6655577788888888888888888876666554 788888888888865556676 7888888
Q ss_pred EEccCCcccccCCCCCCCCccCcCCCCCCCEEEeecCcCcccCChhhccCCCCCCEEEccCCCCcccCCC-CCCCCceEE
Q 042825 173 LDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNNLLQGPTPR-FNNSKLTVD 251 (631)
Q Consensus 173 L~Ls~N~l~g~iP~~~~~~~~~~~~l~~L~~L~L~~N~l~g~iP~~~~~~l~~L~~L~ls~N~l~g~~p~-~~~~~~~~~ 251 (631)
|+|++|+++ .+|... +.++++|++|+|++|++++..|.. +..+++|+.|++++|.+++.++. +........
T Consensus 158 L~l~~n~l~-~~~~~~------~~~l~~L~~L~l~~n~l~~~~~~~-~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~ 229 (285)
T 1ozn_A 158 LFLHGNRIS-SVPERA------FRGLHSLDRLLLHQNRVAHVHPHA-FRDLGRLMTLYLFANNLSALPTEALAPLRALQY 229 (285)
T ss_dssp EECCSSCCC-EECTTT------TTTCTTCCEEECCSSCCCEECTTT-TTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCE
T ss_pred EECCCCccc-ccCHHH------hcCccccCEEECCCCcccccCHhH-ccCcccccEeeCCCCcCCcCCHHHcccCcccCE
Confidence 888888888 455331 457888889999999888766754 88888899999999988886654 333344455
Q ss_pred eecCCCcccC
Q 042825 252 MRTGSNCFCL 261 (631)
Q Consensus 252 l~~~~n~~~~ 261 (631)
+++++|.+..
T Consensus 230 L~l~~N~~~c 239 (285)
T 1ozn_A 230 LRLNDNPWVC 239 (285)
T ss_dssp EECCSSCEEC
T ss_pred EeccCCCccC
Confidence 6778887754
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.75 E-value=2.1e-18 Score=199.99 Aligned_cols=155 Identities=18% Similarity=0.292 Sum_probs=131.3
Q ss_pred CCeEEEEeCCCCCcccCcchhcCCccCceeecccCc-ccC-CCCcCcc----------cccccccccccceecCCC--CC
Q 042825 97 GQVTNIELQDQNRKGTVPPILKKLSSMAVMYLENNQ-LRG-PIPSLVG----------SLEFFSAYEANISGTIPD--FI 162 (631)
Q Consensus 97 ~~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~L~~N~-l~g-~lP~~~~----------~L~~L~l~~n~l~g~ip~--~~ 162 (631)
.+++.|+|++|++.|.+|..|++|++|++|+|++|+ |+| .+|..++ +|+.|++++|+++ .+|. .+
T Consensus 491 ~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l 569 (876)
T 4ecn_A 491 KDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASL 569 (876)
T ss_dssp TTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHH
T ss_pred CCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhh
Confidence 478999999999999999999999999999999998 998 8887543 7899999999999 8998 88
Q ss_pred CcCCCCCCcEEEccCCcccccCCCCCCCCccCcCCCCCCCEEEeecCcCcccCChhhccCCCC-CCEEEccCCCCcccCC
Q 042825 163 GTDTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPK-LTTLNLTNNLLQGPTP 241 (631)
Q Consensus 163 ~~~~l~~L~~L~Ls~N~l~g~iP~~~~~~~~~~~~l~~L~~L~L~~N~l~g~iP~~~~~~l~~-L~~L~ls~N~l~g~~p 241 (631)
+ .+++|+.|+|++|+++ .+| .+ +++++|+.|+|++|+++ .+|.. +..+++ |+.|+|++|.|+ .+|
T Consensus 570 ~--~L~~L~~L~Ls~N~l~-~lp-~~-------~~L~~L~~L~Ls~N~l~-~lp~~-l~~l~~~L~~L~Ls~N~L~-~lp 635 (876)
T 4ecn_A 570 Q--KMVKLGLLDCVHNKVR-HLE-AF-------GTNVKLTDLKLDYNQIE-EIPED-FCAFTDQVEGLGFSHNKLK-YIP 635 (876)
T ss_dssp T--TCTTCCEEECTTSCCC-BCC-CC-------CTTSEESEEECCSSCCS-CCCTT-SCEECTTCCEEECCSSCCC-SCC
T ss_pred h--cCCCCCEEECCCCCcc-cch-hh-------cCCCcceEEECcCCccc-cchHH-HhhccccCCEEECcCCCCC-cCc
Confidence 8 8999999999999999 888 54 48899999999999999 88866 888888 999999999998 666
Q ss_pred CCCCC-C--ceEEeecCCCcccCCCCCC
Q 042825 242 RFNNS-K--LTVDMRTGSNCFCLDDPGL 266 (631)
Q Consensus 242 ~~~~~-~--~~~~l~~~~n~~~~~~~~~ 266 (631)
..... . ....+++++|.+++.+|..
T Consensus 636 ~~~~~~~~~~L~~L~Ls~N~l~g~ip~l 663 (876)
T 4ecn_A 636 NIFNAKSVYVMGSVDFSYNKIGSEGRNI 663 (876)
T ss_dssp SCCCTTCSSCEEEEECCSSCTTTTSSSC
T ss_pred hhhhccccCCCCEEECcCCcCCCccccc
Confidence 65433 2 2566788999998876654
|
| >3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* | Back alignment and structure |
|---|
Probab=99.75 E-value=1.1e-18 Score=189.52 Aligned_cols=158 Identities=20% Similarity=0.194 Sum_probs=113.1
Q ss_pred CCeEEEEeCCCCCcccCcchhcCC---------------------------------------ccCceeecccCcccCCC
Q 042825 97 GQVTNIELQDQNRKGTVPPILKKL---------------------------------------SSMAVMYLENNQLRGPI 137 (631)
Q Consensus 97 ~~l~~l~l~~n~l~g~ip~~~~~l---------------------------------------~~L~~L~L~~N~l~g~l 137 (631)
.+++.|+|++|.+++.+|..+..+ ++|++|+|++|++++.+
T Consensus 212 ~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~ 291 (455)
T 3v47_A 212 TSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSSFGHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALL 291 (455)
T ss_dssp CEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECTTCTTTSCCTTCCSSCCCCTTTTGGGTTSCCCEEECCSSCCCEEC
T ss_pred ceeeeEecCCCcccccchhhhhccccccceeeEeeccccccccccchhhhccCcccccccccccCceEEEecCccccccc
Confidence 468888888888887776655432 46777777777777666
Q ss_pred CcCcc---cccccccccccceecCCCCCCcCCCCCCcEEEccCCcccccCCCCCCCCccCcCCCCCCCEEEeecCcCccc
Q 042825 138 PSLVG---SLEFFSAYEANISGTIPDFIGTDTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGI 214 (631)
Q Consensus 138 P~~~~---~L~~L~l~~n~l~g~ip~~~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~~~~~~~~l~~L~~L~L~~N~l~g~ 214 (631)
|..++ +|+.|++++|++++..|..+. .+++|++|+|++|++++..|.. ++++++|++|+|++|++++.
T Consensus 292 ~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~--~l~~L~~L~Ls~N~l~~~~~~~-------~~~l~~L~~L~Ls~N~l~~~ 362 (455)
T 3v47_A 292 KSVFSHFTDLEQLTLAQNEINKIDDNAFW--GLTHLLKLNLSQNFLGSIDSRM-------FENLDKLEVLDLSYNHIRAL 362 (455)
T ss_dssp TTTTTTCTTCCEEECTTSCCCEECTTTTT--TCTTCCEEECCSSCCCEECGGG-------GTTCTTCCEEECCSSCCCEE
T ss_pred hhhcccCCCCCEEECCCCcccccChhHhc--CcccCCEEECCCCccCCcChhH-------hcCcccCCEEECCCCccccc
Confidence 66554 677777777777777777776 6777888888887777544443 45788888888888888866
Q ss_pred CChhhccCCCCCCEEEccCCCCcccCCCCC-CCCceEEeecCCCcccCCCC
Q 042825 215 FPVSSFNNHPKLTTLNLTNNLLQGPTPRFN-NSKLTVDMRTGSNCFCLDDP 264 (631)
Q Consensus 215 iP~~~~~~l~~L~~L~ls~N~l~g~~p~~~-~~~~~~~l~~~~n~~~~~~~ 264 (631)
.|.. |..+++|++|+|++|++++.++... .......+++++|++.+..|
T Consensus 363 ~~~~-~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 412 (455)
T 3v47_A 363 GDQS-FLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 412 (455)
T ss_dssp CTTT-TTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTT
T ss_pred Chhh-ccccccccEEECCCCccccCCHhHhccCCcccEEEccCCCcccCCC
Confidence 6644 7788888888888888887666543 33445566778888877544
|
| >2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.74 E-value=7.5e-18 Score=173.05 Aligned_cols=229 Identities=16% Similarity=0.190 Sum_probs=155.5
Q ss_pred cCCCCCCceecccceeehhhhcc--ccc--hhhhhhhhhhhccccccccc--cCCCCCCCChhhHHHHHHHHHhCCCCCC
Q 042825 4 IPWHPSNFQLFGFPRLTFRDCMT--ATS--ELEREKTERVQGDRRKKRRK--IPSASSNQSRPDAAVMQDLKASFVIPKR 77 (631)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~--~~~--~~~~~~l~~l~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~k~~~~~~~~ 77 (631)
+..+|..+. -+++.|.+.++.. .+. .....+|+.|++++|.++.. +|... . .. + .
T Consensus 19 l~~ip~~~~-~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~-----------~----~~--~-~ 79 (306)
T 2z66_A 19 LTSVPTGIP-SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSD-----------F----GT--T-S 79 (306)
T ss_dssp CSSCCSCCC-TTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHH-----------H----SC--S-C
T ss_pred cccCCCCCC-CCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCccccc-----------c----cc--c-c
Confidence 455666552 3566666666532 111 23678999999999998732 11110 0 00 0 0
Q ss_pred CCCCCCCCCCcccee--eCCCCCeEEEEeCCCCCcccCc-chhcCCccCceeecccCcccCCCCcCcc---ccccccccc
Q 042825 78 LKWSDPDPCQWSHVI--CSDDGQVTNIELQDQNRKGTVP-PILKKLSSMAVMYLENNQLRGPIPSLVG---SLEFFSAYE 151 (631)
Q Consensus 78 ~~w~~~~~C~w~gv~--C~~~~~l~~l~l~~n~l~g~ip-~~~~~l~~L~~L~L~~N~l~g~lP~~~~---~L~~L~l~~ 151 (631)
+.+-.-..|....+. .....+++.|+|++|.+++..+ ..+.++++|++|+|++|.+++..|..+. +|+.|++++
T Consensus 80 L~~L~Ls~n~i~~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 159 (306)
T 2z66_A 80 LKYLDLSFNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAG 159 (306)
T ss_dssp CCEEECCSCSEEEEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTT
T ss_pred cCEEECCCCccccChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCC
Confidence 111000111111111 1134578899999998886544 5788899999999999998877776654 788899999
Q ss_pred cccee-cCCCCCCcCCCCCCcEEEccCCcccccCCCCCCCCccCcCCCCCCCEEEeecCcCcccCChhhccCCCCCCEEE
Q 042825 152 ANISG-TIPDFIGTDTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLN 230 (631)
Q Consensus 152 n~l~g-~ip~~~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~~~~~~~~l~~L~~L~L~~N~l~g~iP~~~~~~l~~L~~L~ 230 (631)
|++++ .+|..+. .+++|++|+|++|++++..|..+ .++++|++|+|++|++++ +|...+..+++|+.|+
T Consensus 160 n~l~~~~~~~~~~--~l~~L~~L~Ls~n~l~~~~~~~~-------~~l~~L~~L~L~~N~l~~-~~~~~~~~l~~L~~L~ 229 (306)
T 2z66_A 160 NSFQENFLPDIFT--ELRNLTFLDLSQCQLEQLSPTAF-------NSLSSLQVLNMSHNNFFS-LDTFPYKCLNSLQVLD 229 (306)
T ss_dssp CEEGGGEECSCCT--TCTTCCEEECTTSCCCEECTTTT-------TTCTTCCEEECTTSCCSB-CCSGGGTTCTTCCEEE
T ss_pred CccccccchhHHh--hCcCCCEEECCCCCcCCcCHHHh-------cCCCCCCEEECCCCccCc-cChhhccCcccCCEeE
Confidence 99887 5788887 78899999999999986656554 488999999999999985 4444488899999999
Q ss_pred ccCCCCcccCCCCCCC--CceEEeecCCCcccC
Q 042825 231 LTNNLLQGPTPRFNNS--KLTVDMRTGSNCFCL 261 (631)
Q Consensus 231 ls~N~l~g~~p~~~~~--~~~~~l~~~~n~~~~ 261 (631)
|++|.+++.+|..... .....+++++|.+.+
T Consensus 230 L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~ 262 (306)
T 2z66_A 230 YSLNHIMTSKKQELQHFPSSLAFLNLTQNDFAC 262 (306)
T ss_dssp CTTSCCCBCSSSSCCCCCTTCCEEECTTCCEEC
T ss_pred CCCCCCcccCHHHHHhhhccCCEEEccCCCeec
Confidence 9999999988764432 244567778998865
|
| >3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A | Back alignment and structure |
|---|
Probab=99.73 E-value=8.3e-18 Score=169.88 Aligned_cols=155 Identities=22% Similarity=0.334 Sum_probs=113.0
Q ss_pred CeEEEEeCCCCCcccCcchhcCCccCceeecccCcccCCCCcCcc---cccccccccccceecCCCCCCcCCCCCCcEEE
Q 042825 98 QVTNIELQDQNRKGTVPPILKKLSSMAVMYLENNQLRGPIPSLVG---SLEFFSAYEANISGTIPDFIGTDTFPQLSYLD 174 (631)
Q Consensus 98 ~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~L~~N~l~g~lP~~~~---~L~~L~l~~n~l~g~ip~~~~~~~l~~L~~L~ 174 (631)
+++.|+|++|.+++ + +.+.++++|++|+|++|.+++..|..++ +|+.|++++|++++..|..++ .+++|++|+
T Consensus 64 ~L~~L~l~~n~l~~-~-~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~--~l~~L~~L~ 139 (272)
T 3rfs_A 64 NVRYLALGGNKLHD-I-SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFD--KLTNLTYLN 139 (272)
T ss_dssp TCCEEECTTSCCCC-C-GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTT--TCTTCCEEE
T ss_pred CCcEEECCCCCCCC-c-hhhcCCCCCCEEECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhc--cCCCCCEEE
Confidence 67888888888876 3 4678888888888888888865554443 788888888888866666666 778888888
Q ss_pred ccCCcccccCCCCCCCCccCcCCCCCCCEEEeecCcCcccCChhhccCCCCCCEEEccCCCCcccCCCCC-CCCceEEee
Q 042825 175 LGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNNLLQGPTPRFN-NSKLTVDMR 253 (631)
Q Consensus 175 Ls~N~l~g~iP~~~~~~~~~~~~l~~L~~L~L~~N~l~g~iP~~~~~~l~~L~~L~ls~N~l~g~~p~~~-~~~~~~~l~ 253 (631)
|++|+++ .+|+.. ++++++|++|+|++|++++ +|...+..+++|+.|++++|.+++.+|... .......++
T Consensus 140 L~~n~l~-~~~~~~------~~~l~~L~~L~l~~n~l~~-~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 211 (272)
T 3rfs_A 140 LAHNQLQ-SLPKGV------FDKLTNLTELDLSYNQLQS-LPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIW 211 (272)
T ss_dssp CCSSCCC-CCCTTT------TTTCTTCCEEECCSSCCCC-CCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEE
T ss_pred CCCCccC-ccCHHH------hccCccCCEEECCCCCcCc-cCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEE
Confidence 8888888 444332 3478888888888888885 443447788888888888888888777643 334455567
Q ss_pred cCCCcccCCCC
Q 042825 254 TGSNCFCLDDP 264 (631)
Q Consensus 254 ~~~n~~~~~~~ 264 (631)
+++|.+.+..|
T Consensus 212 l~~N~~~~~~~ 222 (272)
T 3rfs_A 212 LHDNPWDCTCP 222 (272)
T ss_dssp CCSSCBCCCTT
T ss_pred ccCCCccccCc
Confidence 78888776544
|
| >3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A | Back alignment and structure |
|---|
Probab=99.73 E-value=7.6e-18 Score=168.03 Aligned_cols=136 Identities=23% Similarity=0.323 Sum_probs=116.5
Q ss_pred CCeEEEEeCCCCCcccCcchhcCCccCceeecccCcccCCCCcCcc---cccccccccccceecCCCCCCcCCCCCCcEE
Q 042825 97 GQVTNIELQDQNRKGTVPPILKKLSSMAVMYLENNQLRGPIPSLVG---SLEFFSAYEANISGTIPDFIGTDTFPQLSYL 173 (631)
Q Consensus 97 ~~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~L~~N~l~g~lP~~~~---~L~~L~l~~n~l~g~ip~~~~~~~l~~L~~L 173 (631)
.+++.|+|++|.+++..|..+.++++|++|+|++|+|++..|..+. +|+.|++++|++++..+..+. .+++|++|
T Consensus 59 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~--~l~~L~~L 136 (251)
T 3m19_A 59 TKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFD--RLTKLKEL 136 (251)
T ss_dssp TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTT--TCTTCCEE
T ss_pred ccCCEEECCCCcCCccCHhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhc--cCCcccEE
Confidence 5799999999999988888899999999999999999965555544 899999999999976666666 79999999
Q ss_pred EccCCcccccCCCCCCCCccCcCCCCCCCEEEeecCcCcccCChhhccCCCCCCEEEccCCCCcccCCC
Q 042825 174 DLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNNLLQGPTPR 242 (631)
Q Consensus 174 ~Ls~N~l~g~iP~~~~~~~~~~~~l~~L~~L~L~~N~l~g~iP~~~~~~l~~L~~L~ls~N~l~g~~p~ 242 (631)
+|++|+|+ .+|+. .++++++|++|+|++|+|++ +|...+..+++|+.|+|++|.+++....
T Consensus 137 ~Ls~N~l~-~~~~~------~~~~l~~L~~L~L~~N~l~~-~~~~~~~~l~~L~~L~l~~N~~~c~~~~ 197 (251)
T 3m19_A 137 RLNTNQLQ-SIPAG------AFDKLTNLQTLSLSTNQLQS-VPHGAFDRLGKLQTITLFGNQFDCSRCE 197 (251)
T ss_dssp ECCSSCCC-CCCTT------TTTTCTTCCEEECCSSCCSC-CCTTTTTTCTTCCEEECCSCCBCTTSTT
T ss_pred ECcCCcCC-ccCHH------HcCcCcCCCEEECCCCcCCc-cCHHHHhCCCCCCEEEeeCCceeCCccc
Confidence 99999999 55542 14589999999999999995 4545589999999999999999987544
|
| >3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* | Back alignment and structure |
|---|
Probab=99.73 E-value=4e-17 Score=177.12 Aligned_cols=108 Identities=19% Similarity=0.206 Sum_probs=61.8
Q ss_pred ccccccccccceecCCCCCCcCCCCCCcEEEccCCcccccCCCCCCCCccCcCCCCCCCEEEeecCcCcccCChhhccCC
Q 042825 144 LEFFSAYEANISGTIPDFIGTDTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNH 223 (631)
Q Consensus 144 L~~L~l~~n~l~g~ip~~~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~~~~~~~~l~~L~~L~L~~N~l~g~iP~~~~~~l 223 (631)
|+.|++++|++++.+|..++ .+++|++|+|++|++++..|.. ++++++|++|+|++|++++..| ..+..+
T Consensus 277 L~~L~l~~n~l~~~~~~~~~--~l~~L~~L~Ls~n~l~~~~~~~-------~~~l~~L~~L~Ls~N~l~~~~~-~~~~~l 346 (455)
T 3v47_A 277 VKTCDLSKSKIFALLKSVFS--HFTDLEQLTLAQNEINKIDDNA-------FWGLTHLLKLNLSQNFLGSIDS-RMFENL 346 (455)
T ss_dssp CCEEECCSSCCCEECTTTTT--TCTTCCEEECTTSCCCEECTTT-------TTTCTTCCEEECCSSCCCEECG-GGGTTC
T ss_pred ceEEEecCccccccchhhcc--cCCCCCEEECCCCcccccChhH-------hcCcccCCEEECCCCccCCcCh-hHhcCc
Confidence 34444444444444455554 4555566666666555444433 3466777777777777764444 336677
Q ss_pred CCCCEEEccCCCCcccCCCCC-CCCceEEeecCCCcccC
Q 042825 224 PKLTTLNLTNNLLQGPTPRFN-NSKLTVDMRTGSNCFCL 261 (631)
Q Consensus 224 ~~L~~L~ls~N~l~g~~p~~~-~~~~~~~l~~~~n~~~~ 261 (631)
++|+.|+|++|++++.+|... .......+++++|.+.+
T Consensus 347 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 385 (455)
T 3v47_A 347 DKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKS 385 (455)
T ss_dssp TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSC
T ss_pred ccCCEEECCCCcccccChhhccccccccEEECCCCcccc
Confidence 777777777777776665432 23344455667776665
|
| >1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A* | Back alignment and structure |
|---|
Probab=99.72 E-value=4.2e-17 Score=165.68 Aligned_cols=155 Identities=20% Similarity=0.235 Sum_probs=129.4
Q ss_pred CCeEEEEeCCCCCcccCcchhcCCccCceeecccCc-ccCCCCcCcc---cccccccccccceecCCCCCCcCCCCCCcE
Q 042825 97 GQVTNIELQDQNRKGTVPPILKKLSSMAVMYLENNQ-LRGPIPSLVG---SLEFFSAYEANISGTIPDFIGTDTFPQLSY 172 (631)
Q Consensus 97 ~~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~L~~N~-l~g~lP~~~~---~L~~L~l~~n~l~g~ip~~~~~~~l~~L~~ 172 (631)
.+++.|+|++|.+++..|..+.++++|++|+|++|. ++...|..+. +|+.|++++|++++..|..+. .+++|++
T Consensus 56 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~--~l~~L~~ 133 (285)
T 1ozn_A 56 RNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFR--GLAALQY 133 (285)
T ss_dssp TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTT--TCTTCCE
T ss_pred CCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhh--CCcCCCE
Confidence 478999999999998888899999999999999997 7655466554 899999999999987788887 8999999
Q ss_pred EEccCCcccccCCCCCCCCccCcCCCCCCCEEEeecCcCcccCChhhccCCCCCCEEEccCCCCcccCCCCCC-CCceEE
Q 042825 173 LDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNNLLQGPTPRFNN-SKLTVD 251 (631)
Q Consensus 173 L~Ls~N~l~g~iP~~~~~~~~~~~~l~~L~~L~L~~N~l~g~iP~~~~~~l~~L~~L~ls~N~l~g~~p~~~~-~~~~~~ 251 (631)
|+|++|+++ .+|... ++++++|++|+|++|+++ .+|...+..+++|+.|+|++|.+++..|.... ......
T Consensus 134 L~l~~n~l~-~~~~~~------~~~l~~L~~L~l~~n~l~-~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~ 205 (285)
T 1ozn_A 134 LYLQDNALQ-ALPDDT------FRDLGNLTHLFLHGNRIS-SVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMT 205 (285)
T ss_dssp EECCSSCCC-CCCTTT------TTTCTTCCEEECCSSCCC-EECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCE
T ss_pred EECCCCccc-ccCHhH------hccCCCccEEECCCCccc-ccCHHHhcCccccCEEECCCCcccccCHhHccCcccccE
Confidence 999999999 455331 458999999999999999 45555588999999999999999998776443 345566
Q ss_pred eecCCCcccC
Q 042825 252 MRTGSNCFCL 261 (631)
Q Consensus 252 l~~~~n~~~~ 261 (631)
+++++|.+.+
T Consensus 206 L~l~~n~l~~ 215 (285)
T 1ozn_A 206 LYLFANNLSA 215 (285)
T ss_dssp EECCSSCCSC
T ss_pred eeCCCCcCCc
Confidence 7789998876
|
| >2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.72 E-value=1.4e-17 Score=162.75 Aligned_cols=149 Identities=17% Similarity=0.160 Sum_probs=116.7
Q ss_pred EEEEeCCCCCcccCcchhcCCccCceeecccCcccCCCCcC-c---ccccccccccccceecCCCCCCcCCCCCCcEEEc
Q 042825 100 TNIELQDQNRKGTVPPILKKLSSMAVMYLENNQLRGPIPSL-V---GSLEFFSAYEANISGTIPDFIGTDTFPQLSYLDL 175 (631)
Q Consensus 100 ~~l~l~~n~l~g~ip~~~~~l~~L~~L~L~~N~l~g~lP~~-~---~~L~~L~l~~n~l~g~ip~~~~~~~l~~L~~L~L 175 (631)
+.+++++|.++ .+|..+.. .+++|+|++|+|++..|.. + .+|+.|++++|++++..|..+. .+++|++|+|
T Consensus 14 ~~l~~s~n~l~-~iP~~~~~--~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~--~l~~L~~L~L 88 (220)
T 2v70_A 14 TTVDCSNQKLN-KIPEHIPQ--YTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFE--GASGVNEILL 88 (220)
T ss_dssp TEEECCSSCCS-SCCSCCCT--TCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTT--TCTTCCEEEC
T ss_pred CEeEeCCCCcc-cCccCCCC--CCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhC--CCCCCCEEEC
Confidence 36778888887 57876643 4689999999998765542 3 3899999999999987777887 8899999999
Q ss_pred cCCcccccCCCCCCCCccCcCCCCCCCEEEeecCcCcccCChhhccCCCCCCEEEccCCCCcccCCCCCC-CCceEEeec
Q 042825 176 GNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNNLLQGPTPRFNN-SKLTVDMRT 254 (631)
Q Consensus 176 s~N~l~g~iP~~~~~~~~~~~~l~~L~~L~L~~N~l~g~iP~~~~~~l~~L~~L~ls~N~l~g~~p~~~~-~~~~~~l~~ 254 (631)
++|++++..|.. +.++++|++|+|++|++++..|.. |..+++|+.|+|++|+|++.+|.... ......+++
T Consensus 89 s~N~l~~~~~~~-------~~~l~~L~~L~Ls~N~l~~~~~~~-~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 160 (220)
T 2v70_A 89 TSNRLENVQHKM-------FKGLESLKTLMLRSNRITCVGNDS-FIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNL 160 (220)
T ss_dssp CSSCCCCCCGGG-------GTTCSSCCEEECTTSCCCCBCTTS-STTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEEC
T ss_pred CCCccCccCHhH-------hcCCcCCCEEECCCCcCCeECHhH-cCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEe
Confidence 999998444433 458899999999999999766654 88999999999999999998776443 344556777
Q ss_pred CCCcccC
Q 042825 255 GSNCFCL 261 (631)
Q Consensus 255 ~~n~~~~ 261 (631)
++|.+..
T Consensus 161 ~~N~l~c 167 (220)
T 2v70_A 161 LANPFNC 167 (220)
T ss_dssp CSCCEEC
T ss_pred cCcCCcC
Confidence 8998765
|
| >1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.72 E-value=2.9e-18 Score=176.80 Aligned_cols=159 Identities=19% Similarity=0.214 Sum_probs=95.4
Q ss_pred CeEEEEeCCCCCcccCcchh--cCCccCceeecccCcccCCCCcCc--------ccccccccccccceecCCCCCCcCCC
Q 042825 98 QVTNIELQDQNRKGTVPPIL--KKLSSMAVMYLENNQLRGPIPSLV--------GSLEFFSAYEANISGTIPDFIGTDTF 167 (631)
Q Consensus 98 ~l~~l~l~~n~l~g~ip~~~--~~l~~L~~L~L~~N~l~g~lP~~~--------~~L~~L~l~~n~l~g~ip~~~~~~~l 167 (631)
+++.|+|++|.++|.+|..+ ..+++|++|+|++|++++. |..+ .+|++|++++|++++..|..++ .+
T Consensus 96 ~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~--~l 172 (312)
T 1wwl_A 96 GLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVR--VF 172 (312)
T ss_dssp CCCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCC--CC
T ss_pred CccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhc--cC
Confidence 56677777777777777665 6777777777777777755 5432 3567777777777766666666 66
Q ss_pred CCCcEEEccCCcccccC--CCCCCCCccCcCCCCCCCEEEeecCcCcc--cCChhhccCCCCCCEEEccCCCCcccCC--
Q 042825 168 PQLSYLDLGNNNLQGTI--PSSFGMPFADISNLSTLEDLSLGHNKLTG--IFPVSSFNNHPKLTTLNLTNNLLQGPTP-- 241 (631)
Q Consensus 168 ~~L~~L~Ls~N~l~g~i--P~~~~~~~~~~~~l~~L~~L~L~~N~l~g--~iP~~~~~~l~~L~~L~ls~N~l~g~~p-- 241 (631)
++|++|+|++|++.|.+ |..+. ++++++|++|+|++|++++ .++...+..+++|+.|+|++|++++.+|
T Consensus 173 ~~L~~L~Ls~N~l~~~~~~~~~~~-----~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~ 247 (312)
T 1wwl_A 173 PALSTLDLSDNPELGERGLISALC-----PLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAP 247 (312)
T ss_dssp SSCCEEECCSCTTCHHHHHHHHSC-----TTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCS
T ss_pred CCCCEEECCCCCcCcchHHHHHHH-----hccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchh
Confidence 77777777777766542 22210 2456666666666666662 2333334556666666666666666553
Q ss_pred CCCCCCceEEeecCCCcccCCCCC
Q 042825 242 RFNNSKLTVDMRTGSNCFCLDDPG 265 (631)
Q Consensus 242 ~~~~~~~~~~l~~~~n~~~~~~~~ 265 (631)
.+........+++++|.++ .+|.
T Consensus 248 ~~~~l~~L~~L~Ls~N~l~-~ip~ 270 (312)
T 1wwl_A 248 SCDWPSQLNSLNLSFTGLK-QVPK 270 (312)
T ss_dssp CCCCCTTCCEEECTTSCCS-SCCS
T ss_pred hhhhcCCCCEEECCCCccC-hhhh
Confidence 2222233344555666665 3443
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* | Back alignment and structure |
|---|
Probab=99.72 E-value=3.9e-17 Score=183.87 Aligned_cols=160 Identities=16% Similarity=0.190 Sum_probs=125.3
Q ss_pred CCCeEEEEeCCCCCcccCcchhcCCccCceeecccCcccCCCCcC-c---ccccccccccccceecCCCCCCcCCCCCCc
Q 042825 96 DGQVTNIELQDQNRKGTVPPILKKLSSMAVMYLENNQLRGPIPSL-V---GSLEFFSAYEANISGTIPDFIGTDTFPQLS 171 (631)
Q Consensus 96 ~~~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~L~~N~l~g~lP~~-~---~~L~~L~l~~n~l~g~ip~~~~~~~l~~L~ 171 (631)
..+++.|++++|.+.+..|..+..+++|++|+|++|++++..|.. + .+|+.|++++|++++..|..++ .+++|+
T Consensus 375 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~--~l~~L~ 452 (606)
T 3t6q_A 375 LSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFD--GLPALQ 452 (606)
T ss_dssp CTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEECCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTT--TCTTCC
T ss_pred CCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCCCcccchhhhCcccCCEEECCCCccCCcCHHHHh--CCCCCC
Confidence 357888889888888888888888888999999999888766643 3 3788888999988888888887 788899
Q ss_pred EEEccCCccccc-CCCCCCCCccCcCCCCCCCEEEeecCcCcccCChhhccCCCCCCEEEccCCCCcccCCCCCCC-Cce
Q 042825 172 YLDLGNNNLQGT-IPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNNLLQGPTPRFNNS-KLT 249 (631)
Q Consensus 172 ~L~Ls~N~l~g~-iP~~~~~~~~~~~~l~~L~~L~L~~N~l~g~iP~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~-~~~ 249 (631)
+|+|++|++++. +|.. ..+.++++|++|+|++|++++..|.. |..+++|+.|+|++|++++.+|..... ...
T Consensus 453 ~L~L~~n~l~~~~~~~~-----~~~~~l~~L~~L~Ls~n~l~~~~~~~-~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L 526 (606)
T 3t6q_A 453 HLNLQGNHFPKGNIQKT-----NSLQTLGRLEILVLSFCDLSSIDQHA-FTSLKMMNHVDLSHNRLTSSSIEALSHLKGI 526 (606)
T ss_dssp EEECTTCBCGGGEECSS-----CGGGGCTTCCEEECTTSCCCEECTTT-TTTCTTCCEEECCSSCCCGGGGGGGTTCCSC
T ss_pred EEECCCCCCCccccccc-----hhhccCCCccEEECCCCccCccChhh-hccccCCCEEECCCCccCcCChhHhCccccc
Confidence 999999988863 2321 12568899999999999999766754 888999999999999999888764443 333
Q ss_pred EEeecCCCcccCCCC
Q 042825 250 VDMRTGSNCFCLDDP 264 (631)
Q Consensus 250 ~~l~~~~n~~~~~~~ 264 (631)
.+++++|.+++..|
T Consensus 527 -~L~L~~N~l~~~~~ 540 (606)
T 3t6q_A 527 -YLNLASNHISIILP 540 (606)
T ss_dssp -EEECCSSCCCCCCG
T ss_pred -EEECcCCcccccCH
Confidence 77789998887433
|
| >1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A | Back alignment and structure |
|---|
Probab=99.72 E-value=4.5e-17 Score=166.12 Aligned_cols=151 Identities=25% Similarity=0.281 Sum_probs=105.4
Q ss_pred CCeEEEEeCCCCCcccCcchhcCCccCceeecccCcccCCCCcCcc---cccccccccccceecCCCCCCcCCCCCCcEE
Q 042825 97 GQVTNIELQDQNRKGTVPPILKKLSSMAVMYLENNQLRGPIPSLVG---SLEFFSAYEANISGTIPDFIGTDTFPQLSYL 173 (631)
Q Consensus 97 ~~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~L~~N~l~g~lP~~~~---~L~~L~l~~n~l~g~ip~~~~~~~l~~L~~L 173 (631)
.+++.|+|++|.+++ ++.. +.+++|++|+|++|+|+ .+|..+. +|+.|++++|++++..|..+. .+++|++|
T Consensus 55 ~~L~~L~L~~n~l~~-~~~~-~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~--~l~~L~~L 129 (290)
T 1p9a_G 55 TRLTQLNLDRAELTK-LQVD-GTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALR--GLGELQEL 129 (290)
T ss_dssp TTCCEEECTTSCCCE-EECC-SCCTTCCEEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTT--TCTTCCEE
T ss_pred CCCCEEECCCCccCc-ccCC-CCCCcCCEEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHc--CCCCCCEE
Confidence 467778888888775 3332 67778888888888887 5666443 777888888888765556666 67788888
Q ss_pred EccCCcccccCCCCCCCCccCcCCCCCCCEEEeecCcCcccCChhhccCCCCCCEEEccCCCCcccCCCCCCCCceEEee
Q 042825 174 DLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNNLLQGPTPRFNNSKLTVDMR 253 (631)
Q Consensus 174 ~Ls~N~l~g~iP~~~~~~~~~~~~l~~L~~L~L~~N~l~g~iP~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~~~~~~l~ 253 (631)
+|++|+|+ .+|... +.++++|+.|+|++|+|+ .+|...|..+++|+.|+|++|+|+..++.+........++
T Consensus 130 ~L~~N~l~-~~~~~~------~~~l~~L~~L~L~~N~l~-~l~~~~~~~l~~L~~L~L~~N~l~~ip~~~~~~~~L~~l~ 201 (290)
T 1p9a_G 130 YLKGNELK-TLPPGL------LTPTPKLEKLSLANNNLT-ELPAGLLNGLENLDTLLLQENSLYTIPKGFFGSHLLPFAF 201 (290)
T ss_dssp ECTTSCCC-CCCTTT------TTTCTTCCEEECTTSCCS-CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCCCSEEE
T ss_pred ECCCCCCC-ccChhh------cccccCCCEEECCCCcCC-ccCHHHhcCcCCCCEEECCCCcCCccChhhcccccCCeEE
Confidence 88888887 455432 347788888888888887 5665656778888888888888875555544443444456
Q ss_pred cCCCccc
Q 042825 254 TGSNCFC 260 (631)
Q Consensus 254 ~~~n~~~ 260 (631)
+++|.+.
T Consensus 202 L~~Np~~ 208 (290)
T 1p9a_G 202 LHGNPWL 208 (290)
T ss_dssp CCSCCBC
T ss_pred eCCCCcc
Confidence 6777653
|
| >2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.72 E-value=8.5e-17 Score=162.24 Aligned_cols=155 Identities=22% Similarity=0.350 Sum_probs=127.4
Q ss_pred CCeEEEEeCCCCCcccCcchhcCCccCceeecccCcccCCCCcCcc---cccccccccccceecCCCCCCcCCCCCCcEE
Q 042825 97 GQVTNIELQDQNRKGTVPPILKKLSSMAVMYLENNQLRGPIPSLVG---SLEFFSAYEANISGTIPDFIGTDTFPQLSYL 173 (631)
Q Consensus 97 ~~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~L~~N~l~g~lP~~~~---~L~~L~l~~n~l~g~ip~~~~~~~l~~L~~L 173 (631)
.+++.|+|++|.++...+..+.++++|++|+|++|++++..+..+. +|+.|++++|++++..|..+. .+++|++|
T Consensus 61 ~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~--~l~~L~~L 138 (270)
T 2o6q_A 61 TKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFD--SLTKLTYL 138 (270)
T ss_dssp TTCCEEECCSSCCSCCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTT--TCTTCCEE
T ss_pred CCCCEEECCCCccCeeChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhC--cCcCCCEE
Confidence 5799999999999954444568999999999999999965444443 899999999999987777777 89999999
Q ss_pred EccCCcccccCCCCCCCCccCcCCCCCCCEEEeecCcCcccCChhhccCCCCCCEEEccCCCCcccCCCCCC-CCceEEe
Q 042825 174 DLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNNLLQGPTPRFNN-SKLTVDM 252 (631)
Q Consensus 174 ~Ls~N~l~g~iP~~~~~~~~~~~~l~~L~~L~L~~N~l~g~iP~~~~~~l~~L~~L~ls~N~l~g~~p~~~~-~~~~~~l 252 (631)
+|++|+++ .+|... +.++++|++|+|++|++++ +|...|..+++|+.|+|++|.+++..+.... ......+
T Consensus 139 ~Ls~n~l~-~~~~~~------~~~l~~L~~L~L~~n~l~~-~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 210 (270)
T 2o6q_A 139 SLGYNELQ-SLPKGV------FDKLTSLKELRLYNNQLKR-VPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKML 210 (270)
T ss_dssp ECCSSCCC-CCCTTT------TTTCTTCCEEECCSSCCSC-CCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEE
T ss_pred ECCCCcCC-ccCHhH------ccCCcccceeEecCCcCcE-eChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEE
Confidence 99999999 566442 4689999999999999995 5555588999999999999999987776433 3445567
Q ss_pred ecCCCcccC
Q 042825 253 RTGSNCFCL 261 (631)
Q Consensus 253 ~~~~n~~~~ 261 (631)
++++|.+..
T Consensus 211 ~l~~N~~~c 219 (270)
T 2o6q_A 211 QLQENPWDC 219 (270)
T ss_dssp ECCSSCBCC
T ss_pred EecCCCeeC
Confidence 789998754
|
| >2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A | Back alignment and structure |
|---|
Probab=99.72 E-value=2.7e-17 Score=160.72 Aligned_cols=147 Identities=22% Similarity=0.271 Sum_probs=115.3
Q ss_pred EEEeCCCCCcccCcchhcCCccCceeecccCcccCCCCcCcc---cccccccccccceecCCCCCCcCCCCCCcEEEccC
Q 042825 101 NIELQDQNRKGTVPPILKKLSSMAVMYLENNQLRGPIPSLVG---SLEFFSAYEANISGTIPDFIGTDTFPQLSYLDLGN 177 (631)
Q Consensus 101 ~l~l~~n~l~g~ip~~~~~l~~L~~L~L~~N~l~g~lP~~~~---~L~~L~l~~n~l~g~ip~~~~~~~l~~L~~L~Ls~ 177 (631)
.+++++++++ .+|..+. ++|+.|+|++|+|++..|..+. +|+.|+|++|++++..|..+. .+++|++|+|++
T Consensus 15 ~v~c~~~~l~-~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~--~l~~L~~L~Ls~ 89 (220)
T 2v9t_B 15 IVDCRGKGLT-EIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQ--GLRSLNSLVLYG 89 (220)
T ss_dssp EEECTTSCCS-SCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTT--TCSSCCEEECCS
T ss_pred EEEcCCCCcC-cCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhh--CCcCCCEEECCC
Confidence 3555666776 5776554 6889999999999865554544 789999999999988888888 889999999999
Q ss_pred CcccccCCCCCCCCccCcCCCCCCCEEEeecCcCcccCChhhccCCCCCCEEEccCCCCcccCCCCCC-CCceEEeecCC
Q 042825 178 NNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNNLLQGPTPRFNN-SKLTVDMRTGS 256 (631)
Q Consensus 178 N~l~g~iP~~~~~~~~~~~~l~~L~~L~L~~N~l~g~iP~~~~~~l~~L~~L~ls~N~l~g~~p~~~~-~~~~~~l~~~~ 256 (631)
|+|+ .+|..+ +.++++|++|+|++|++++..|. .|..+++|+.|+|++|+|++..+.... ......+++++
T Consensus 90 N~l~-~l~~~~------f~~l~~L~~L~L~~N~l~~~~~~-~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~ 161 (220)
T 2v9t_B 90 NKIT-ELPKSL------FEGLFSLQLLLLNANKINCLRVD-AFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQ 161 (220)
T ss_dssp SCCC-CCCTTT------TTTCTTCCEEECCSSCCCCCCTT-TTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCS
T ss_pred CcCC-ccCHhH------ccCCCCCCEEECCCCCCCEeCHH-HcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCC
Confidence 9999 677553 45889999999999999965564 488999999999999999988876433 34445677788
Q ss_pred Cccc
Q 042825 257 NCFC 260 (631)
Q Consensus 257 n~~~ 260 (631)
|.+.
T Consensus 162 N~~~ 165 (220)
T 2v9t_B 162 NPFI 165 (220)
T ss_dssp SCEE
T ss_pred CCcC
Confidence 8874
|
| >2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.71 E-value=2.8e-17 Score=168.76 Aligned_cols=159 Identities=16% Similarity=0.226 Sum_probs=131.9
Q ss_pred CCCeEEEEeCCCCCcccCcchhcCCccCceeecccCcccCCCC-cCc---ccccccccccccceecCCCCCCcCCCCCCc
Q 042825 96 DGQVTNIELQDQNRKGTVPPILKKLSSMAVMYLENNQLRGPIP-SLV---GSLEFFSAYEANISGTIPDFIGTDTFPQLS 171 (631)
Q Consensus 96 ~~~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~L~~N~l~g~lP-~~~---~~L~~L~l~~n~l~g~ip~~~~~~~l~~L~ 171 (631)
..+++.|+|++|.+. .+|..+..+++|++|+|++|++++..+ ..+ .+|+.|++++|++++..|..+. .+++|+
T Consensus 77 ~~~L~~L~Ls~n~i~-~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~--~l~~L~ 153 (306)
T 2z66_A 77 TTSLKYLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFN--GLSSLE 153 (306)
T ss_dssp CSCCCEEECCSCSEE-EEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTT--TCTTCC
T ss_pred ccccCEEECCCCccc-cChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcc--cCcCCC
Confidence 357999999999998 588889999999999999999986443 333 3899999999999998888887 889999
Q ss_pred EEEccCCcccc-cCCCCCCCCccCcCCCCCCCEEEeecCcCcccCChhhccCCCCCCEEEccCCCCcccCCC-CCCCCce
Q 042825 172 YLDLGNNNLQG-TIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNNLLQGPTPR-FNNSKLT 249 (631)
Q Consensus 172 ~L~Ls~N~l~g-~iP~~~~~~~~~~~~l~~L~~L~L~~N~l~g~iP~~~~~~l~~L~~L~ls~N~l~g~~p~-~~~~~~~ 249 (631)
+|+|++|.+++ .+|..+ .++++|++|+|++|++++..|. .+..+++|+.|+|++|.+++..+. +......
T Consensus 154 ~L~l~~n~l~~~~~~~~~-------~~l~~L~~L~Ls~n~l~~~~~~-~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 225 (306)
T 2z66_A 154 VLKMAGNSFQENFLPDIF-------TELRNLTFLDLSQCQLEQLSPT-AFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSL 225 (306)
T ss_dssp EEECTTCEEGGGEECSCC-------TTCTTCCEEECTTSCCCEECTT-TTTTCTTCCEEECTTSCCSBCCSGGGTTCTTC
T ss_pred EEECCCCccccccchhHH-------hhCcCCCEEECCCCCcCCcCHH-HhcCCCCCCEEECCCCccCccChhhccCcccC
Confidence 99999999997 467654 5899999999999999976665 488999999999999999987764 3334455
Q ss_pred EEeecCCCcccCCCCC
Q 042825 250 VDMRTGSNCFCLDDPG 265 (631)
Q Consensus 250 ~~l~~~~n~~~~~~~~ 265 (631)
..+++++|.+.+..+.
T Consensus 226 ~~L~L~~N~l~~~~~~ 241 (306)
T 2z66_A 226 QVLDYSLNHIMTSKKQ 241 (306)
T ss_dssp CEEECTTSCCCBCSSS
T ss_pred CEeECCCCCCcccCHH
Confidence 5677899999885553
|
| >3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A | Back alignment and structure |
|---|
Probab=99.71 E-value=1.3e-16 Score=161.11 Aligned_cols=155 Identities=19% Similarity=0.245 Sum_probs=126.2
Q ss_pred CCCeEEEEeCCCCCcccCcchhcCCccCceeecccCcccCCCCcCcc---cccccccccccceecCCCCCCcCCCCCCcE
Q 042825 96 DGQVTNIELQDQNRKGTVPPILKKLSSMAVMYLENNQLRGPIPSLVG---SLEFFSAYEANISGTIPDFIGTDTFPQLSY 172 (631)
Q Consensus 96 ~~~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~L~~N~l~g~lP~~~~---~L~~L~l~~n~l~g~ip~~~~~~~l~~L~~ 172 (631)
..+++.|+|++|.+++..+..+.++++|++|+|++|++++..|..++ +|+.|++++|++++..|..++ .+++|+.
T Consensus 84 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~--~l~~L~~ 161 (272)
T 3rfs_A 84 LTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFD--KLTNLTE 161 (272)
T ss_dssp CTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTT--TCTTCCE
T ss_pred CCCCCEEECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhc--cCccCCE
Confidence 45799999999999977777789999999999999999976665544 899999999999976666667 7899999
Q ss_pred EEccCCcccccCCCCCCCCccCcCCCCCCCEEEeecCcCcccCChhhccCCCCCCEEEccCCCCcccCCCCCCCCceEEe
Q 042825 173 LDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNNLLQGPTPRFNNSKLTVDM 252 (631)
Q Consensus 173 L~Ls~N~l~g~iP~~~~~~~~~~~~l~~L~~L~L~~N~l~g~iP~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~~~~~~l 252 (631)
|+|++|++++ +|+.. ++++++|++|+|++|++++..| ..+..+++|+.|+|++|.+++..|... .+
T Consensus 162 L~l~~n~l~~-~~~~~------~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~l~~N~~~~~~~~l~------~l 227 (272)
T 3rfs_A 162 LDLSYNQLQS-LPEGV------FDKLTQLKDLRLYQNQLKSVPD-GVFDRLTSLQYIWLHDNPWDCTCPGIR------YL 227 (272)
T ss_dssp EECCSSCCCC-CCTTT------TTTCTTCCEEECCSSCCSCCCT-TTTTTCTTCCEEECCSSCBCCCTTTTH------HH
T ss_pred EECCCCCcCc-cCHHH------hcCCccCCEEECCCCcCCccCH-HHHhCCcCCCEEEccCCCccccCcHHH------HH
Confidence 9999999994 44332 4589999999999999996555 458899999999999999999887532 23
Q ss_pred ecCCCcccCCCCCC
Q 042825 253 RTGSNCFCLDDPGL 266 (631)
Q Consensus 253 ~~~~n~~~~~~~~~ 266 (631)
++..|.++|.+|..
T Consensus 228 ~~~~n~~~g~ip~~ 241 (272)
T 3rfs_A 228 SEWINKHSGVVRNS 241 (272)
T ss_dssp HHHHHHTGGGBBCT
T ss_pred HHHHHhCCCcccCc
Confidence 45778888877753
|
| >3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* | Back alignment and structure |
|---|
Probab=99.70 E-value=2.6e-17 Score=168.42 Aligned_cols=172 Identities=15% Similarity=0.207 Sum_probs=121.2
Q ss_pred hcCCcccc-eeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc---------------------
Q 042825 416 ATNNFSEE-NRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK--------------------- 472 (631)
Q Consensus 416 ~t~~f~~~-~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~--------------------- 472 (631)
..++|... +.||+|+||.||+|+.. +++.||||++... ..+.+|++++.+
T Consensus 15 ~~~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-------~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~ 87 (299)
T 3m2w_A 15 IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-------PKARREVELHWRASQCPHIVRIVDVYENLYAGR 87 (299)
T ss_dssp GGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTE
T ss_pred cccchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEeccc-------HHHHHHHHHHHHhccCCCchhHHhhhhhhcCCC
Confidence 34567776 78999999999999975 6899999999642 345566666522
Q ss_pred ------------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC---------------------------CCcEEEee
Q 042825 473 ------------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG---------------------------DDMRVADF 513 (631)
Q Consensus 473 ------------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g---------------------------~~~kl~DF 513 (631)
|+|.+++.. .....+++.....++.+++.| ..+||+||
T Consensus 88 ~~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~~~kl~Df 164 (299)
T 3m2w_A 88 KCLLIVMECLDGGELFSRIQD---RGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDF 164 (299)
T ss_dssp EEEEEEECCCCSCBHHHHHHH---CTTCCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSTTCCEEECCC
T ss_pred ceEEEEEeecCCCcHHHHHHh---ccCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEecCCCCCcEEEecc
Confidence 466666643 223468899999998888765 34789999
Q ss_pred ccccccCCCCccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHH------
Q 042825 514 GLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATW------ 587 (631)
Q Consensus 514 Gla~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~------ 587 (631)
|+++... +..++.++||||+||++|||+||+.||......... ..+...
T Consensus 165 g~a~~~~------------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~-~~~~~~~~~~~~ 219 (299)
T 3m2w_A 165 GFAKETT------------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAIS-PGMKTRIRMGQY 219 (299)
T ss_dssp TTCEECT------------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC--------CCSCCSSCTTCC
T ss_pred ccccccc------------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhh-HHHHHHHhhccc
Confidence 9987542 134678999999999999999999999754321100 000000
Q ss_pred --h-HhhhcCChhHHHHHHhhcCCChhhHHhHHHHHHH
Q 042825 588 --F-QKMHKNHDTFQMAIDKTIQLDEENLANVSTVAEL 622 (631)
Q Consensus 588 --~-~~~~~~~~~l~~~id~~L~~d~~~r~~~~~vl~l 622 (631)
. ......++++.+++.+||..||.+|+++.++++-
T Consensus 220 ~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~h 257 (299)
T 3m2w_A 220 EFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH 257 (299)
T ss_dssp SSCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred cCCchhcccCCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 0 0001235789999999999999999999998863
|
| >2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A | Back alignment and structure |
|---|
Probab=99.70 E-value=1.3e-16 Score=155.84 Aligned_cols=144 Identities=23% Similarity=0.287 Sum_probs=122.6
Q ss_pred CCccceeeCCC----------CCeEEEEeCCCCCcccCcchhcCCccCceeecccCcccCCCCcCcc---cccccccccc
Q 042825 86 CQWSHVICSDD----------GQVTNIELQDQNRKGTVPPILKKLSSMAVMYLENNQLRGPIPSLVG---SLEFFSAYEA 152 (631)
Q Consensus 86 C~w~gv~C~~~----------~~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~L~~N~l~g~lP~~~~---~L~~L~l~~n 152 (631)
|.|..|.|... .+++.|+|++|++++..+..|..+++|++|+|++|+|++..|..+. +|++|+|++|
T Consensus 11 C~~~~v~c~~~~l~~iP~~l~~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N 90 (220)
T 2v9t_B 11 CSNNIVDCRGKGLTEIPTNLPETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGN 90 (220)
T ss_dssp EETTEEECTTSCCSSCCSSCCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSS
T ss_pred ECCCEEEcCCCCcCcCCCccCcCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCC
Confidence 56899999642 3789999999999977777899999999999999999987787765 8999999999
Q ss_pred cceecCCCCCCcCCCCCCcEEEccCCcccccCCCCCCCCccCcCCCCCCCEEEeecCcCcccCChhhccCCCCCCEEEcc
Q 042825 153 NISGTIPDFIGTDTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLT 232 (631)
Q Consensus 153 ~l~g~ip~~~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~~~~~~~~l~~L~~L~L~~N~l~g~iP~~~~~~l~~L~~L~ls 232 (631)
+++...+..+. .+++|++|+|++|++++..|.. +.++++|++|+|++|+|++ +|...|..+++|+.|+|+
T Consensus 91 ~l~~l~~~~f~--~l~~L~~L~L~~N~l~~~~~~~-------~~~l~~L~~L~L~~N~l~~-~~~~~~~~l~~L~~L~L~ 160 (220)
T 2v9t_B 91 KITELPKSLFE--GLFSLQLLLLNANKINCLRVDA-------FQDLHNLNLLSLYDNKLQT-IAKGTFSPLRAIQTMHLA 160 (220)
T ss_dssp CCCCCCTTTTT--TCTTCCEEECCSSCCCCCCTTT-------TTTCTTCCEEECCSSCCSC-CCTTTTTTCTTCCEEECC
T ss_pred cCCccCHhHcc--CCCCCCEEECCCCCCCEeCHHH-------cCCCCCCCEEECCCCcCCE-ECHHHHhCCCCCCEEEeC
Confidence 99954444456 7999999999999999655655 4589999999999999995 554558999999999999
Q ss_pred CCCCccc
Q 042825 233 NNLLQGP 239 (631)
Q Consensus 233 ~N~l~g~ 239 (631)
+|.++..
T Consensus 161 ~N~~~c~ 167 (220)
T 2v9t_B 161 QNPFICD 167 (220)
T ss_dssp SSCEECS
T ss_pred CCCcCCC
Confidence 9998763
|
| >2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A* | Back alignment and structure |
|---|
Probab=99.69 E-value=8.5e-17 Score=162.63 Aligned_cols=155 Identities=17% Similarity=0.224 Sum_probs=109.2
Q ss_pred CCeEEEEeCCCCCcccCcchhcCCccCceeecccCcccCCCCcCcc---ccccccccccccee-cCCCCCCcCCCCCCcE
Q 042825 97 GQVTNIELQDQNRKGTVPPILKKLSSMAVMYLENNQLRGPIPSLVG---SLEFFSAYEANISG-TIPDFIGTDTFPQLSY 172 (631)
Q Consensus 97 ~~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~L~~N~l~g~lP~~~~---~L~~L~l~~n~l~g-~ip~~~~~~~l~~L~~ 172 (631)
.+++.|+|++|.+++..|..+.++++|++|++++|++++..+..++ +|+.|++++|++++ .+|..+. .+++|++
T Consensus 76 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~--~l~~L~~ 153 (276)
T 2z62_A 76 SHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFS--NLTNLEH 153 (276)
T ss_dssp TTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGG--GCTTCCE
T ss_pred cCCCEEECCCCccCccChhhhcCCccccEEECCCCCccccCchhcccCCCCCEEECcCCccceecCchhhc--cCCCCCE
Confidence 4678888888888877777788888888888888888765443443 78888888888876 3677777 7788888
Q ss_pred EEccCCcccccCCCCCCCCccCcCCCCCCC----EEEeecCcCcccCChhhccCCCCCCEEEccCCCCcccCCCCCC-CC
Q 042825 173 LDLGNNNLQGTIPSSFGMPFADISNLSTLE----DLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNNLLQGPTPRFNN-SK 247 (631)
Q Consensus 173 L~Ls~N~l~g~iP~~~~~~~~~~~~l~~L~----~L~L~~N~l~g~iP~~~~~~l~~L~~L~ls~N~l~g~~p~~~~-~~ 247 (631)
|+|++|++++..+.. +..+.+|+ .|+|++|++++ +|...+ ...+|+.|+|++|++++.++.... ..
T Consensus 154 L~Ls~N~l~~~~~~~-------~~~l~~L~~l~l~L~ls~n~l~~-~~~~~~-~~~~L~~L~L~~n~l~~~~~~~~~~l~ 224 (276)
T 2z62_A 154 LDLSSNKIQSIYCTD-------LRVLHQMPLLNLSLDLSLNPMNF-IQPGAF-KEIRLKELALDTNQLKSVPDGIFDRLT 224 (276)
T ss_dssp EECCSSCCCEECGGG-------GHHHHTCTTCCEEEECCSSCCCE-ECTTSS-CSCCEEEEECCSSCCSCCCTTTTTTCC
T ss_pred EECCCCCCCcCCHHH-------hhhhhhccccceeeecCCCcccc-cCcccc-CCCcccEEECCCCceeecCHhHhcccc
Confidence 888888888543333 33445555 78888888884 444433 444788888888888877665433 33
Q ss_pred ceEEeecCCCcccCC
Q 042825 248 LTVDMRTGSNCFCLD 262 (631)
Q Consensus 248 ~~~~l~~~~n~~~~~ 262 (631)
....+++++|.+.+.
T Consensus 225 ~L~~L~l~~N~~~c~ 239 (276)
T 2z62_A 225 SLQKIWLHTNPWDCS 239 (276)
T ss_dssp SCCEEECCSSCBCCC
T ss_pred cccEEEccCCccccc
Confidence 445566788887753
|
| >2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A* | Back alignment and structure |
|---|
Probab=99.69 E-value=8e-17 Score=162.83 Aligned_cols=155 Identities=21% Similarity=0.260 Sum_probs=116.0
Q ss_pred CCeEEEEeCCCCCcccCcchhcCCccCceeecccCcccCCCCcCcc---cccccccccccceecCCCCCCcCCCCCCcEE
Q 042825 97 GQVTNIELQDQNRKGTVPPILKKLSSMAVMYLENNQLRGPIPSLVG---SLEFFSAYEANISGTIPDFIGTDTFPQLSYL 173 (631)
Q Consensus 97 ~~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~L~~N~l~g~lP~~~~---~L~~L~l~~n~l~g~ip~~~~~~~l~~L~~L 173 (631)
.+++.|+|++|.+++..+..+.++++|++|+|++|.+++..|..+. +|+.|++++|++++..+..++ .+++|++|
T Consensus 52 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~--~l~~L~~L 129 (276)
T 2z62_A 52 PELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIG--HLKTLKEL 129 (276)
T ss_dssp TTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTSCCCCSTTCCCT--TCTTCCEE
T ss_pred cCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEECCCCCccccCchhcc--cCCCCCEE
Confidence 3678888888888866666788888888888888888866555554 788888888888876665676 78888888
Q ss_pred EccCCcccc-cCCCCCCCCccCcCCCCCCCEEEeecCcCcccCChhhccCCCCCC----EEEccCCCCcccCCCCCCCCc
Q 042825 174 DLGNNNLQG-TIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLT----TLNLTNNLLQGPTPRFNNSKL 248 (631)
Q Consensus 174 ~Ls~N~l~g-~iP~~~~~~~~~~~~l~~L~~L~L~~N~l~g~iP~~~~~~l~~L~----~L~ls~N~l~g~~p~~~~~~~ 248 (631)
+|++|++++ .+|.. ++++++|++|+|++|++++..+ ..+..+++|+ .|++++|.+++..+.......
T Consensus 130 ~l~~n~l~~~~l~~~-------~~~l~~L~~L~Ls~N~l~~~~~-~~~~~l~~L~~l~l~L~ls~n~l~~~~~~~~~~~~ 201 (276)
T 2z62_A 130 NVAHNLIQSFKLPEY-------FSNLTNLEHLDLSSNKIQSIYC-TDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEIR 201 (276)
T ss_dssp ECCSSCCCCCCCCGG-------GGGCTTCCEEECCSSCCCEECG-GGGHHHHTCTTCCEEEECCSSCCCEECTTSSCSCC
T ss_pred ECcCCccceecCchh-------hccCCCCCEEECCCCCCCcCCH-HHhhhhhhccccceeeecCCCcccccCccccCCCc
Confidence 888888874 35644 4578888888888888885433 3466666666 788888888887777665555
Q ss_pred eEEeecCCCcccC
Q 042825 249 TVDMRTGSNCFCL 261 (631)
Q Consensus 249 ~~~l~~~~n~~~~ 261 (631)
...+++++|.+.+
T Consensus 202 L~~L~L~~n~l~~ 214 (276)
T 2z62_A 202 LKELALDTNQLKS 214 (276)
T ss_dssp EEEEECCSSCCSC
T ss_pred ccEEECCCCceee
Confidence 6667788888776
|
| >3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.69 E-value=1.7e-16 Score=171.76 Aligned_cols=151 Identities=19% Similarity=0.250 Sum_probs=87.8
Q ss_pred CCeEEEEeCCCCCcccCcchhcCCccCceeecccCcccCCCCc-Cc---ccccccccccccceecCCCCCCcCCCCCCcE
Q 042825 97 GQVTNIELQDQNRKGTVPPILKKLSSMAVMYLENNQLRGPIPS-LV---GSLEFFSAYEANISGTIPDFIGTDTFPQLSY 172 (631)
Q Consensus 97 ~~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~L~~N~l~g~lP~-~~---~~L~~L~l~~n~l~g~ip~~~~~~~l~~L~~ 172 (631)
.+++.|+|++|.+++..+..|.++++|++|+|++|+..+.+|. .+ .+|+.|++++|+++ .+|. +. .+++|+.
T Consensus 136 ~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~-~~~~-~~--~l~~L~~ 211 (440)
T 3zyj_A 136 SKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLR-EIPN-LT--PLIKLDE 211 (440)
T ss_dssp SSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCS-SCCC-CT--TCSSCCE
T ss_pred ccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCc-cccc-cC--CCcccCE
Confidence 3566666666666644444566666666666666443334443 22 25666666666666 4453 33 5666666
Q ss_pred EEccCCcccccCCCCCCCCccCcCCCCCCCEEEeecCcCcccCChhhccCCCCCCEEEccCCCCcccCCCCCC-CCceEE
Q 042825 173 LDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNNLLQGPTPRFNN-SKLTVD 251 (631)
Q Consensus 173 L~Ls~N~l~g~iP~~~~~~~~~~~~l~~L~~L~L~~N~l~g~iP~~~~~~l~~L~~L~ls~N~l~g~~p~~~~-~~~~~~ 251 (631)
|+|++|++++..|.. +.++++|+.|+|++|++++..| ..|..+++|+.|+|++|+|++..+.... ......
T Consensus 212 L~Ls~N~l~~~~~~~-------~~~l~~L~~L~L~~n~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 283 (440)
T 3zyj_A 212 LDLSGNHLSAIRPGS-------FQGLMHLQKLWMIQSQIQVIER-NAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLER 283 (440)
T ss_dssp EECTTSCCCEECTTT-------TTTCTTCCEEECTTCCCCEECT-TSSTTCTTCCEEECTTSCCCCCCTTTTSSCTTCCE
T ss_pred EECCCCccCccChhh-------hccCccCCEEECCCCceeEECh-hhhcCCCCCCEEECCCCCCCccChhHhccccCCCE
Confidence 666666666444443 3466777777777777764444 3366677777777777777766555332 223334
Q ss_pred eecCCCcc
Q 042825 252 MRTGSNCF 259 (631)
Q Consensus 252 l~~~~n~~ 259 (631)
+++++|.+
T Consensus 284 L~L~~Np~ 291 (440)
T 3zyj_A 284 IHLHHNPW 291 (440)
T ss_dssp EECCSSCE
T ss_pred EEcCCCCc
Confidence 55566655
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=99.69 E-value=1.4e-16 Score=179.25 Aligned_cols=229 Identities=15% Similarity=0.099 Sum_probs=117.4
Q ss_pred CCceecccceeehhhhcc--ccc--hhhhhhhhhhhccccccccccCCCCCCCChhhHHHHHHHHHhCCCCCCCCCCCCC
Q 042825 9 SNFQLFGFPRLTFRDCMT--ATS--ELEREKTERVQGDRRKKRRKIPSASSNQSRPDAAVMQDLKASFVIPKRLKWSDPD 84 (631)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~--~~~--~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~k~~~~~~~~~~w~~~~ 84 (631)
.++.+-++..+.+.++.. .++ ...+.+|+.|++.+|.+++..|.....+.... .+. +++
T Consensus 46 ~~l~l~~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~-----~L~--------L~~---- 108 (597)
T 3oja_B 46 EDITLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQ-----KLY--------MGF---- 108 (597)
T ss_dssp SSGGGCCCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCC-----EEE--------CCS----
T ss_pred ccccCCCceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCC-----EEE--------CCC----
Confidence 344555556665555532 111 12457788888888888765554444332100 000 000
Q ss_pred CCCccceee---CCCCCeEEEEeCCCCCcccCcchhcCCccCceeecccCcccCCCCcCcc---cccccccccccceecC
Q 042825 85 PCQWSHVIC---SDDGQVTNIELQDQNRKGTVPPILKKLSSMAVMYLENNQLRGPIPSLVG---SLEFFSAYEANISGTI 158 (631)
Q Consensus 85 ~C~w~gv~C---~~~~~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~L~~N~l~g~lP~~~~---~L~~L~l~~n~l~g~i 158 (631)
|...++.- ....+++.|+|++|.+++..+..|+++++|++|+|++|.|++..|..++ +|+.|++++|++++.
T Consensus 109 -n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~- 186 (597)
T 3oja_B 109 -NAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHV- 186 (597)
T ss_dssp -SCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBC-
T ss_pred -CcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCc-
Confidence 00111100 1224566667776666633333346666677777777766665555443 566666666666642
Q ss_pred CCCCCcCCCCCCcEEEccCCcccc-cCCCCCC------------------------------CCccCcCCCCCCCEEEee
Q 042825 159 PDFIGTDTFPQLSYLDLGNNNLQG-TIPSSFG------------------------------MPFADISNLSTLEDLSLG 207 (631)
Q Consensus 159 p~~~~~~~l~~L~~L~Ls~N~l~g-~iP~~~~------------------------------~~~~~~~~l~~L~~L~L~ 207 (631)
+ ++ .+++|+.|++++|.+++ ..|..+. ..++.++++++|+.|+|+
T Consensus 187 ~--~~--~l~~L~~L~l~~n~l~~l~~~~~L~~L~ls~n~l~~~~~~~~~~L~~L~L~~n~l~~~~~l~~l~~L~~L~Ls 262 (597)
T 3oja_B 187 D--LS--LIPSLFHANVSYNLLSTLAIPIAVEELDASHNSINVVRGPVNVELTILKLQHNNLTDTAWLLNYPGLVEVDLS 262 (597)
T ss_dssp C--GG--GCTTCSEEECCSSCCSEEECCTTCSEEECCSSCCCEEECSCCSCCCEEECCSSCCCCCGGGGGCTTCSEEECC
T ss_pred C--hh--hhhhhhhhhcccCccccccCCchhheeeccCCcccccccccCCCCCEEECCCCCCCCChhhccCCCCCEEECC
Confidence 2 11 23344443333333332 1111110 012235566777777777
Q ss_pred cCcCcccCChhhccCCCCCCEEEccCCCCcccCCCCCCCCceEEeecCCCcccC
Q 042825 208 HNKLTGIFPVSSFNNHPKLTTLNLTNNLLQGPTPRFNNSKLTVDMRTGSNCFCL 261 (631)
Q Consensus 208 ~N~l~g~iP~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~~~~~~l~~~~n~~~~ 261 (631)
+|.+++.+|.. |+.+++|+.|+|++|.+++..+..........+++++|.+..
T Consensus 263 ~N~l~~~~~~~-~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~L~~L~Ls~N~l~~ 315 (597)
T 3oja_B 263 YNELEKIMYHP-FVKMQRLERLYISNNRLVALNLYGQPIPTLKVLDLSHNHLLH 315 (597)
T ss_dssp SSCCCEEESGG-GTTCSSCCEEECTTSCCCEEECSSSCCTTCCEEECCSSCCCC
T ss_pred CCccCCCCHHH-hcCccCCCEEECCCCCCCCCCcccccCCCCcEEECCCCCCCc
Confidence 77777666644 667777777777777777654433333344455667776663
|
| >3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A | Back alignment and structure |
|---|
Probab=99.69 E-value=2.9e-16 Score=170.50 Aligned_cols=150 Identities=18% Similarity=0.241 Sum_probs=72.3
Q ss_pred CeEEEEeCCCCCcccCcchhcCCccCceeecccCcccCCCCcC-c---ccccccccccccceecCCCCCCcCCCCCCcEE
Q 042825 98 QVTNIELQDQNRKGTVPPILKKLSSMAVMYLENNQLRGPIPSL-V---GSLEFFSAYEANISGTIPDFIGTDTFPQLSYL 173 (631)
Q Consensus 98 ~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~L~~N~l~g~lP~~-~---~~L~~L~l~~n~l~g~ip~~~~~~~l~~L~~L 173 (631)
+++.|+|++|.+++..+..|.++++|+.|+|++|+..+.+|.. + .+|+.|++++|++++ +|. +. .+++|+.|
T Consensus 148 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~-~~~-~~--~l~~L~~L 223 (452)
T 3zyi_A 148 KLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKD-MPN-LT--PLVGLEEL 223 (452)
T ss_dssp TCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSS-CCC-CT--TCTTCCEE
T ss_pred CCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCcccc-ccc-cc--ccccccEE
Confidence 4455555555555333334455555555555553332233321 1 245555555555553 332 33 45555555
Q ss_pred EccCCcccccCCCCCCCCccCcCCCCCCCEEEeecCcCcccCChhhccCCCCCCEEEccCCCCcccCCCCCC-CCceEEe
Q 042825 174 DLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNNLLQGPTPRFNN-SKLTVDM 252 (631)
Q Consensus 174 ~Ls~N~l~g~iP~~~~~~~~~~~~l~~L~~L~L~~N~l~g~iP~~~~~~l~~L~~L~ls~N~l~g~~p~~~~-~~~~~~l 252 (631)
+|++|+|++..|.. +.++++|+.|+|++|++++..|. .|..+++|+.|+|++|+|++.++.... ......+
T Consensus 224 ~Ls~N~l~~~~~~~-------~~~l~~L~~L~L~~n~l~~~~~~-~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 295 (452)
T 3zyi_A 224 EMSGNHFPEIRPGS-------FHGLSSLKKLWVMNSQVSLIERN-AFDGLASLVELNLAHNNLSSLPHDLFTPLRYLVEL 295 (452)
T ss_dssp ECTTSCCSEECGGG-------GTTCTTCCEEECTTSCCCEECTT-TTTTCTTCCEEECCSSCCSCCCTTSSTTCTTCCEE
T ss_pred ECcCCcCcccCccc-------ccCccCCCEEEeCCCcCceECHH-HhcCCCCCCEEECCCCcCCccChHHhccccCCCEE
Confidence 55555555433332 33555666666666666544343 255556666666666666555444322 2223334
Q ss_pred ecCCCcc
Q 042825 253 RTGSNCF 259 (631)
Q Consensus 253 ~~~~n~~ 259 (631)
++++|.+
T Consensus 296 ~L~~Np~ 302 (452)
T 3zyi_A 296 HLHHNPW 302 (452)
T ss_dssp ECCSSCE
T ss_pred EccCCCc
Confidence 4455544
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* | Back alignment and structure |
|---|
Probab=99.68 E-value=4.5e-17 Score=181.08 Aligned_cols=165 Identities=18% Similarity=0.229 Sum_probs=136.5
Q ss_pred CCCccceeeCCC------------CCeEEEEeCCCCCcccCcchhcCCccCceeecccCcccCCCCcCcc---ccccccc
Q 042825 85 PCQWSHVICSDD------------GQVTNIELQDQNRKGTVPPILKKLSSMAVMYLENNQLRGPIPSLVG---SLEFFSA 149 (631)
Q Consensus 85 ~C~w~gv~C~~~------------~~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~L~~N~l~g~lP~~~~---~L~~L~l 149 (631)
.|.|.|+ |+.. .+++.|+|++|.+++..|..|.++++|++|+|++|++++..|..++ +|++|++
T Consensus 3 ~C~~~~~-c~~~~~~l~~ip~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L 81 (549)
T 2z81_A 3 SCDASGV-CDGRSRSFTSIPSGLTAAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDL 81 (549)
T ss_dssp EECTTSE-EECTTSCCSSCCSCCCTTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEC
T ss_pred cCCCCce-EECCCCccccccccCCCCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEEC
Confidence 4899988 8532 3799999999999988889999999999999999999987777665 8999999
Q ss_pred ccccceecCCCCCCcCCCCCCcEEEccCCcccc-cCCCCCCCCccCcCCCCCCCEEEeecCcCcccCChhhccCCCCCCE
Q 042825 150 YEANISGTIPDFIGTDTFPQLSYLDLGNNNLQG-TIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTT 228 (631)
Q Consensus 150 ~~n~l~g~ip~~~~~~~l~~L~~L~Ls~N~l~g-~iP~~~~~~~~~~~~l~~L~~L~L~~N~l~g~iP~~~~~~l~~L~~ 228 (631)
++|++++..|..++ .+++|++|+|++|++++ .+|.. ++++++|++|+|++|++.+.+|...+..+++|++
T Consensus 82 s~n~l~~~~~~~~~--~l~~L~~L~Ls~n~l~~~~~~~~-------~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~ 152 (549)
T 2z81_A 82 SDNHLSSLSSSWFG--PLSSLKYLNLMGNPYQTLGVTSL-------FPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNE 152 (549)
T ss_dssp TTSCCCSCCHHHHT--TCTTCCEEECTTCCCSSSCSSCS-------CTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEE
T ss_pred CCCccCccCHHHhc--cCCCCcEEECCCCcccccchhhh-------hhccCCccEEECCCCccccccCHhhhhcccccCe
Confidence 99999987777687 89999999999999995 34544 4589999999999999777888666999999999
Q ss_pred EEccCCCCcccCCCCCCC-CceEEeecCCCcc
Q 042825 229 LNLTNNLLQGPTPRFNNS-KLTVDMRTGSNCF 259 (631)
Q Consensus 229 L~ls~N~l~g~~p~~~~~-~~~~~l~~~~n~~ 259 (631)
|++++|.+++.+|..... .....+++++|.+
T Consensus 153 L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~~ 184 (549)
T 2z81_A 153 LEIKALSLRNYQSQSLKSIRDIHHLTLHLSES 184 (549)
T ss_dssp EEEEETTCCEECTTTTTTCSEEEEEEEECSBS
T ss_pred eeccCCcccccChhhhhccccCceEecccCcc
Confidence 999999999988765432 3333444455543
|
| >2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.68 E-value=1.9e-16 Score=154.64 Aligned_cols=146 Identities=22% Similarity=0.270 Sum_probs=125.2
Q ss_pred CCccceeeCCC----------CCeEEEEeCCCCCcccCcc-hhcCCccCceeecccCcccCCCCcCcc---ccccccccc
Q 042825 86 CQWSHVICSDD----------GQVTNIELQDQNRKGTVPP-ILKKLSSMAVMYLENNQLRGPIPSLVG---SLEFFSAYE 151 (631)
Q Consensus 86 C~w~gv~C~~~----------~~l~~l~l~~n~l~g~ip~-~~~~l~~L~~L~L~~N~l~g~lP~~~~---~L~~L~l~~ 151 (631)
|.|..+.|... ..++.|+|++|.+++..|. .|.++++|++|+|++|+|++..|..+. +|+.|+|++
T Consensus 11 C~~~~l~~s~n~l~~iP~~~~~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 90 (220)
T 2v70_A 11 CEGTTVDCSNQKLNKIPEHIPQYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTS 90 (220)
T ss_dssp EETTEEECCSSCCSSCCSCCCTTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred ECCCEeEeCCCCcccCccCCCCCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCC
Confidence 56888888632 3578999999999987654 589999999999999999976665555 899999999
Q ss_pred ccceecCCCCCCcCCCCCCcEEEccCCcccccCCCCCCCCccCcCCCCCCCEEEeecCcCcccCChhhccCCCCCCEEEc
Q 042825 152 ANISGTIPDFIGTDTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNL 231 (631)
Q Consensus 152 n~l~g~ip~~~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~~~~~~~~l~~L~~L~L~~N~l~g~iP~~~~~~l~~L~~L~l 231 (631)
|++++..|..+. .+++|++|+|++|+|++..|..+ .++++|++|+|++|+|++..|.. |..+++|+.|+|
T Consensus 91 N~l~~~~~~~~~--~l~~L~~L~Ls~N~l~~~~~~~~-------~~l~~L~~L~L~~N~l~~~~~~~-~~~l~~L~~L~L 160 (220)
T 2v70_A 91 NRLENVQHKMFK--GLESLKTLMLRSNRITCVGNDSF-------IGLSSVRLLSLYDNQITTVAPGA-FDTLHSLSTLNL 160 (220)
T ss_dssp SCCCCCCGGGGT--TCSSCCEEECTTSCCCCBCTTSS-------TTCTTCSEEECTTSCCCCBCTTT-TTTCTTCCEEEC
T ss_pred CccCccCHhHhc--CCcCCCEEECCCCcCCeECHhHc-------CCCccCCEEECCCCcCCEECHHH-hcCCCCCCEEEe
Confidence 999987777787 89999999999999997667654 58999999999999999766754 999999999999
Q ss_pred cCCCCcccCC
Q 042825 232 TNNLLQGPTP 241 (631)
Q Consensus 232 s~N~l~g~~p 241 (631)
++|.+++..+
T Consensus 161 ~~N~l~c~c~ 170 (220)
T 2v70_A 161 LANPFNCNCY 170 (220)
T ss_dssp CSCCEECSGG
T ss_pred cCcCCcCCCc
Confidence 9999998655
|
| >3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A | Back alignment and structure |
|---|
Probab=99.68 E-value=7.1e-17 Score=164.31 Aligned_cols=181 Identities=13% Similarity=0.003 Sum_probs=124.5
Q ss_pred CCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCC-HHHHHHHHHHHHHHhc-----------------------
Q 042825 418 NNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVT-EQGIAQFESEITVLTK----------------------- 472 (631)
Q Consensus 418 ~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~-~~~~~~~~~Ei~~l~~----------------------- 472 (631)
++|...+.||+|+||.||+|+.. +|+.||||++...... ....++|.+|++++.+
T Consensus 31 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 110 (286)
T 3uqc_A 31 GRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVVA 110 (286)
T ss_dssp TTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred CcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEEE
Confidence 57999999999999999999976 4899999999865433 4556789999998876
Q ss_pred -----CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC-----------CC-----cEEEeeccccccCCCCcccccccc
Q 042825 473 -----GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG-----------DD-----MRVADFGLVRLVPENGKHSILTKV 531 (631)
Q Consensus 473 -----gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g-----------~~-----~kl~DFGla~~~~~~~~~~~~~~~ 531 (631)
++|.+++. . .....+..+|+.+++.| .+ +-|.+.|..+
T Consensus 111 e~~~g~~L~~~l~----~---~~~~~~~~~i~~ql~~aL~~lH~~givH~Dikp~NIll~~~g~~k-------------- 169 (286)
T 3uqc_A 111 EWIRGGSLQEVAD----T---SPSPVGAIRAMQSLAAAADAAHRAGVALSIDHPSRVRVSIDGDVV-------------- 169 (286)
T ss_dssp ECCCEEEHHHHHT----T---CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEETTSCEE--------------
T ss_pred EecCCCCHHHHHh----c---CCChHHHHHHHHHHHHHHHHHHHCCCccCCCCcccEEEcCCCCEE--------------
Confidence 45555542 1 13444567778777766 22 2233333222
Q ss_pred ccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHH---HHHHHH----HhHhhhcCChhHHHHHHh
Q 042825 532 AGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEY---IIHLAT----WFQKMHKNHDTFQMAIDK 604 (631)
Q Consensus 532 ~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~---~~~l~~----~~~~~~~~~~~l~~~id~ 604 (631)
.++.+|++| ++.++|||||||++|||+||+.||.+....... ...+.. ........++++.+++.+
T Consensus 170 l~~~~~~~~-------~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 242 (286)
T 3uqc_A 170 LAYPATMPD-------ANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPAERDTAGQPIEPADIDRDIPFQISAVAAR 242 (286)
T ss_dssp ECSCCCCTT-------CCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEECCBCTTSCBCCHHHHCTTSCHHHHHHHHH
T ss_pred EEeccccCC-------CCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHHHHHHhccCCCChhhcccCCCHHHHHHHHH
Confidence 235567764 789999999999999999999999865432100 000000 001112235689999999
Q ss_pred hcCCChhhHHhHHHHHHHHHhhh
Q 042825 605 TIQLDEENLANVSTVAELGDHCC 627 (631)
Q Consensus 605 ~L~~d~~~r~~~~~vl~lal~C~ 627 (631)
||..||.+| ++.++++......
T Consensus 243 ~l~~dP~~R-s~~el~~~L~~~~ 264 (286)
T 3uqc_A 243 SVQGDGGIR-SASTLLNLMQQAT 264 (286)
T ss_dssp HHCTTSSCC-CHHHHHHHHHHHH
T ss_pred HcccCCccC-CHHHHHHHHHHHh
Confidence 999999999 9999887655443
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A | Back alignment and structure |
|---|
Probab=99.68 E-value=3.1e-16 Score=170.18 Aligned_cols=204 Identities=18% Similarity=0.241 Sum_probs=123.4
Q ss_pred CCCCCceecccceeehhhhcc---ccchhhhhhhhhhhccccccccccCCCCCCCChhhHHHHHHHHHhCCCCCCCCCCC
Q 042825 6 WHPSNFQLFGFPRLTFRDCMT---ATSELEREKTERVQGDRRKKRRKIPSASSNQSRPDAAVMQDLKASFVIPKRLKWSD 82 (631)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~k~~~~~~~~~~w~~ 82 (631)
..|+|++.-.++.+.+.++.. +.....+++|+.|++++|.+++.+|.........+...+......- -..++.+
T Consensus 3 ~~p~~~~~~~L~~L~l~~n~l~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~~~--l~~L~l~- 79 (454)
T 1jl5_A 3 INPRNVSNTFLQEPLRHSSNLTEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDRQ--AHELELN- 79 (454)
T ss_dssp -------------------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHHHT--CSEEECT-
T ss_pred ccccccccccchhhhcccCchhhCChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhccC--CCEEEec-
Confidence 369999888888888777643 3334578999999999999999999998877665544444433211 0001111
Q ss_pred CCCCCccceeeCCCCCeEEEEeCCCCCcccCcchhcCCccCceeecccCcccCCCCcCcccccccccccccceecCCCCC
Q 042825 83 PDPCQWSHVICSDDGQVTNIELQDQNRKGTVPPILKKLSSMAVMYLENNQLRGPIPSLVGSLEFFSAYEANISGTIPDFI 162 (631)
Q Consensus 83 ~~~C~w~gv~C~~~~~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~L~~N~l~g~lP~~~~~L~~L~l~~n~l~g~ip~~~ 162 (631)
.|...++.- -..+++.|++++|.+++ +|+. +++|++|++++|++++ +|....+|++|++++|++++ +| .+
T Consensus 80 --~~~l~~lp~-~~~~L~~L~l~~n~l~~-lp~~---~~~L~~L~l~~n~l~~-l~~~~~~L~~L~L~~n~l~~-lp-~~ 149 (454)
T 1jl5_A 80 --NLGLSSLPE-LPPHLESLVASCNSLTE-LPEL---PQSLKSLLVDNNNLKA-LSDLPPLLEYLGVSNNQLEK-LP-EL 149 (454)
T ss_dssp --TSCCSCCCS-CCTTCSEEECCSSCCSS-CCCC---CTTCCEEECCSSCCSC-CCSCCTTCCEEECCSSCCSS-CC-CC
T ss_pred --CCccccCCC-CcCCCCEEEccCCcCCc-cccc---cCCCcEEECCCCccCc-ccCCCCCCCEEECcCCCCCC-Cc-cc
Confidence 122222211 12578999999999997 7754 4789999999999985 66555689999999999996 88 47
Q ss_pred CcCCCCCCcEEEccCCcccccCCCCCCCCccCcCCCCCCCEEEeecCcCcccCChhhccCCCCCCEEEccCCCCcc
Q 042825 163 GTDTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNNLLQG 238 (631)
Q Consensus 163 ~~~~l~~L~~L~Ls~N~l~g~iP~~~~~~~~~~~~l~~L~~L~L~~N~l~g~iP~~~~~~l~~L~~L~ls~N~l~g 238 (631)
+ .+++|++|++++|+++ .+|..+ .+|++|+|++|++++ +| . ++.+++|+.|++++|.+++
T Consensus 150 ~--~l~~L~~L~l~~N~l~-~lp~~~----------~~L~~L~L~~n~l~~-l~-~-~~~l~~L~~L~l~~N~l~~ 209 (454)
T 1jl5_A 150 Q--NSSFLKIIDVDNNSLK-KLPDLP----------PSLEFIAAGNNQLEE-LP-E-LQNLPFLTAIYADNNSLKK 209 (454)
T ss_dssp T--TCTTCCEEECCSSCCS-CCCCCC----------TTCCEEECCSSCCSS-CC-C-CTTCTTCCEEECCSSCCSS
T ss_pred C--CCCCCCEEECCCCcCc-ccCCCc----------ccccEEECcCCcCCc-Cc-c-ccCCCCCCEEECCCCcCCc
Confidence 7 8899999999999999 477543 366666666666664 55 2 5666666666666666665
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.67 E-value=2.9e-16 Score=175.23 Aligned_cols=159 Identities=16% Similarity=0.229 Sum_probs=131.7
Q ss_pred CCCeEEEEeCCCCCcccCcchhcCCccCceeecccCcccCCCCc-Cc---ccccccccccccceecCCCCCCcCCCCCCc
Q 042825 96 DGQVTNIELQDQNRKGTVPPILKKLSSMAVMYLENNQLRGPIPS-LV---GSLEFFSAYEANISGTIPDFIGTDTFPQLS 171 (631)
Q Consensus 96 ~~~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~L~~N~l~g~lP~-~~---~~L~~L~l~~n~l~g~ip~~~~~~~l~~L~ 171 (631)
..+++.|++++|.+.+ +|+.+..+++|+.|++++|.+++..|. .+ .+|+.|++++|++++.+|..+. .+++|+
T Consensus 372 ~~~L~~L~l~~n~l~~-~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~--~l~~L~ 448 (570)
T 2z63_A 372 TTSLKYLDLSFNGVIT-MSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFN--GLSSLE 448 (570)
T ss_dssp CSCCCEEECCSCSEEE-EEEEEETCTTCCEEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTT--TCTTCC
T ss_pred cCccCEEECCCCcccc-ccccccccCCCCEEEccCCccccccchhhhhcCCCCCEEeCcCCcccccchhhhh--cCCcCc
Confidence 3578899999999885 444589999999999999999876663 33 3899999999999998888887 889999
Q ss_pred EEEccCCccc-ccCCCCCCCCccCcCCCCCCCEEEeecCcCcccCChhhccCCCCCCEEEccCCCCcccCCCCC-CCCce
Q 042825 172 YLDLGNNNLQ-GTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNNLLQGPTPRFN-NSKLT 249 (631)
Q Consensus 172 ~L~Ls~N~l~-g~iP~~~~~~~~~~~~l~~L~~L~L~~N~l~g~iP~~~~~~l~~L~~L~ls~N~l~g~~p~~~-~~~~~ 249 (631)
+|+|++|.++ +.+|..+ ..+++|++|+|++|++++..|.. +..+++|+.|++++|++++.+|... .....
T Consensus 449 ~L~l~~n~l~~~~~p~~~-------~~l~~L~~L~l~~n~l~~~~~~~-~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L 520 (570)
T 2z63_A 449 VLKMAGNSFQENFLPDIF-------TELRNLTFLDLSQCQLEQLSPTA-FNSLSSLQVLNMASNQLKSVPDGIFDRLTSL 520 (570)
T ss_dssp EEECTTCEEGGGEECSCC-------TTCTTCCEEECTTSCCCEECTTT-TTTCTTCCEEECCSSCCSCCCTTTTTTCTTC
T ss_pred EEECcCCcCccccchhhh-------hcccCCCEEECCCCccccCChhh-hhcccCCCEEeCCCCcCCCCCHHHhhcccCC
Confidence 9999999998 6788664 48999999999999999777755 8899999999999999999888643 34455
Q ss_pred EEeecCCCcccCCCCC
Q 042825 250 VDMRTGSNCFCLDDPG 265 (631)
Q Consensus 250 ~~l~~~~n~~~~~~~~ 265 (631)
..+++++|.+.+..|.
T Consensus 521 ~~L~l~~N~~~~~~~~ 536 (570)
T 2z63_A 521 QKIWLHTNPWDCSCPR 536 (570)
T ss_dssp CEEECCSSCBCCCTTT
T ss_pred cEEEecCCcccCCCcc
Confidence 6677899999876553
|
| >3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.67 E-value=3.6e-16 Score=169.06 Aligned_cols=208 Identities=21% Similarity=0.204 Sum_probs=158.7
Q ss_pred cCCCCCCceecccceeehhhhcc----ccchhhhhhhhhhhccccccccccCCCCCCCChhhHHHHHHHHHhCCCCCCCC
Q 042825 4 IPWHPSNFQLFGFPRLTFRDCMT----ATSELEREKTERVQGDRRKKRRKIPSASSNQSRPDAAVMQDLKASFVIPKRLK 79 (631)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~k~~~~~~~~~~ 79 (631)
+..+|.++. -+++.|.+.++.. ......+.+|+.|++++|++++..+.+..
T Consensus 55 l~~iP~~~~-~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~------------------------ 109 (440)
T 3zyj_A 55 LREVPDGIS-TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFN------------------------ 109 (440)
T ss_dssp CSSCCSCCC-TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGT------------------------
T ss_pred cCcCCCCCC-CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhcc------------------------
Confidence 456676662 3455566655532 22334679999999999999843332211
Q ss_pred CCCCCCCCccceeeCCCCCeEEEEeCCCCCcccCcchhcCCccCceeecccCcccCCCCcCcc---ccccccccccccee
Q 042825 80 WSDPDPCQWSHVICSDDGQVTNIELQDQNRKGTVPPILKKLSSMAVMYLENNQLRGPIPSLVG---SLEFFSAYEANISG 156 (631)
Q Consensus 80 w~~~~~C~w~gv~C~~~~~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~L~~N~l~g~lP~~~~---~L~~L~l~~n~l~g 156 (631)
...+++.|+|++|.+++..+..|..+++|++|+|++|+|++..+..+. +|+.|++++|+..+
T Consensus 110 ---------------~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~ 174 (440)
T 3zyj_A 110 ---------------GLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLS 174 (440)
T ss_dssp ---------------TCSSCCEEECCSSCCSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCC
T ss_pred ---------------CCccCCEEECCCCcCCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcc
Confidence 123689999999999965556799999999999999999954444443 89999999966555
Q ss_pred cCCC-CCCcCCCCCCcEEEccCCcccccCCCCCCCCccCcCCCCCCCEEEeecCcCcccCChhhccCCCCCCEEEccCCC
Q 042825 157 TIPD-FIGTDTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNNL 235 (631)
Q Consensus 157 ~ip~-~~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~~~~~~~~l~~L~~L~L~~N~l~g~iP~~~~~~l~~L~~L~ls~N~ 235 (631)
.+|. .+. .+++|++|+|++|+++ .+|. +.++++|++|+|++|++++..|. .|..+++|+.|+|++|+
T Consensus 175 ~i~~~~~~--~l~~L~~L~L~~n~l~-~~~~--------~~~l~~L~~L~Ls~N~l~~~~~~-~~~~l~~L~~L~L~~n~ 242 (440)
T 3zyj_A 175 YISEGAFE--GLSNLRYLNLAMCNLR-EIPN--------LTPLIKLDELDLSGNHLSAIRPG-SFQGLMHLQKLWMIQSQ 242 (440)
T ss_dssp EECTTTTT--TCSSCCEEECTTSCCS-SCCC--------CTTCSSCCEEECTTSCCCEECTT-TTTTCTTCCEEECTTCC
T ss_pred eeCcchhh--cccccCeecCCCCcCc-cccc--------cCCCcccCEEECCCCccCccChh-hhccCccCCEEECCCCc
Confidence 6665 566 8999999999999999 7773 45899999999999999976665 49999999999999999
Q ss_pred CcccCCCCCC-CCceEEeecCCCcccCCC
Q 042825 236 LQGPTPRFNN-SKLTVDMRTGSNCFCLDD 263 (631)
Q Consensus 236 l~g~~p~~~~-~~~~~~l~~~~n~~~~~~ 263 (631)
+++..|.... ......+++++|+++...
T Consensus 243 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 271 (440)
T 3zyj_A 243 IQVIERNAFDNLQSLVEINLAHNNLTLLP 271 (440)
T ss_dssp CCEECTTSSTTCTTCCEEECTTSCCCCCC
T ss_pred eeEEChhhhcCCCCCCEEECCCCCCCccC
Confidence 9998876443 345566788999998633
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=99.67 E-value=1.4e-17 Score=182.46 Aligned_cols=148 Identities=20% Similarity=0.135 Sum_probs=69.1
Q ss_pred CeEEEEeCCCCCcccCcchhcCCccCceeecccCcccCCCCcCcccccccccccccceecCCCCCCcCCCCCCcEEEccC
Q 042825 98 QVTNIELQDQNRKGTVPPILKKLSSMAVMYLENNQLRGPIPSLVGSLEFFSAYEANISGTIPDFIGTDTFPQLSYLDLGN 177 (631)
Q Consensus 98 ~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~L~~N~l~g~lP~~~~~L~~L~l~~n~l~g~ip~~~~~~~l~~L~~L~Ls~ 177 (631)
+++.|+|++|.+++. |+ .++|++|+|++|.|++..+..+.+|+.|++++|++++..|..++ .+++|+.|+|++
T Consensus 81 ~L~~L~Ls~N~l~~l-~~----~~~L~~L~L~~N~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~--~l~~L~~L~Ls~ 153 (487)
T 3oja_A 81 TLRTLDLNNNYVQEL-LV----GPSIETLHAANNNISRVSCSRGQGKKNIYLANNKITMLRDLDEG--CRSRVQYLDLKL 153 (487)
T ss_dssp TCCEEECCSSEEEEE-EE----CTTCCEEECCSSCCCCEEECCCSSCEEEECCSSCCCSGGGBCGG--GGSSEEEEECTT
T ss_pred CCCEEEecCCcCCCC-CC----CCCcCEEECcCCcCCCCCccccCCCCEEECCCCCCCCCCchhhc--CCCCCCEEECCC
Confidence 444455555444431 11 14444455555554444344444555555555555554454444 455555555555
Q ss_pred CcccccCCCCCCCCccCcCCCCCCCEEEeecCcCcccCChhhccCCCCCCEEEccCCCCcccCCCCCCCCceEEeecCCC
Q 042825 178 NNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNNLLQGPTPRFNNSKLTVDMRTGSN 257 (631)
Q Consensus 178 N~l~g~iP~~~~~~~~~~~~l~~L~~L~L~~N~l~g~iP~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~~~~~~l~~~~n 257 (631)
|.|++.+|..+. .++++|++|+|++|.|++. |. ...+++|+.|+|++|.|++.+|.+........+++++|
T Consensus 154 N~l~~~~~~~l~------~~l~~L~~L~Ls~N~l~~~-~~--~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N 224 (487)
T 3oja_A 154 NEIDTVNFAELA------ASSDTLEHLNLQYNFIYDV-KG--QVVFAKLKTLDLSSNKLAFMGPEFQSAAGVTWISLRNN 224 (487)
T ss_dssp SCCCEEEGGGGG------GGTTTCCEEECTTSCCCEE-EC--CCCCTTCCEEECCSSCCCEECGGGGGGTTCSEEECTTS
T ss_pred CCCCCcChHHHh------hhCCcccEEecCCCccccc-cc--cccCCCCCEEECCCCCCCCCCHhHcCCCCccEEEecCC
Confidence 555544443321 2345555555555555533 21 22355555555555555554444333333333444555
Q ss_pred cccC
Q 042825 258 CFCL 261 (631)
Q Consensus 258 ~~~~ 261 (631)
.+++
T Consensus 225 ~l~~ 228 (487)
T 3oja_A 225 KLVL 228 (487)
T ss_dssp CCCE
T ss_pred cCcc
Confidence 5543
|
| >1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* | Back alignment and structure |
|---|
Probab=99.67 E-value=2.8e-16 Score=163.14 Aligned_cols=222 Identities=18% Similarity=0.181 Sum_probs=157.9
Q ss_pred CCCC-Cc-eecccceeehhhhcc----ccchhhhhhhhhhhccccccccccCCCCCCCChhhHHHHHHHHHhCCCCCCCC
Q 042825 6 WHPS-NF-QLFGFPRLTFRDCMT----ATSELEREKTERVQGDRRKKRRKIPSASSNQSRPDAAVMQDLKASFVIPKRLK 79 (631)
Q Consensus 6 ~~~~-~~-~~~~~~~~~~~~~~~----~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~k~~~~~~~~~~ 79 (631)
.+|. .| ++.+++.|.+.++.. +.....+.+|+.|++++|+++ .+|...... |..+.
T Consensus 66 ~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~~-------L~~L~---------- 127 (330)
T 1xku_A 66 EIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLK-ELPEKMPKT-------LQELR---------- 127 (330)
T ss_dssp CBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCS-BCCSSCCTT-------CCEEE----------
T ss_pred EeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECCCCcCC-ccChhhccc-------ccEEE----------
Confidence 4444 56 788899998887742 223446799999999999998 455443210 00000
Q ss_pred CCCCCCCCcccee---eCCCCCeEEEEeCCCCCc--ccCcchhcCCccCceeecccCcccCCCCcCcc-ccccccccccc
Q 042825 80 WSDPDPCQWSHVI---CSDDGQVTNIELQDQNRK--GTVPPILKKLSSMAVMYLENNQLRGPIPSLVG-SLEFFSAYEAN 153 (631)
Q Consensus 80 w~~~~~C~w~gv~---C~~~~~l~~l~l~~n~l~--g~ip~~~~~l~~L~~L~L~~N~l~g~lP~~~~-~L~~L~l~~n~ 153 (631)
- ..|...++. .....+++.|++++|.+. |..+..+.++++|++|++++|.++ .+|..+. +|+.|++++|+
T Consensus 128 l---~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~-~l~~~~~~~L~~L~l~~n~ 203 (330)
T 1xku_A 128 V---HENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNIT-TIPQGLPPSLTELHLDGNK 203 (330)
T ss_dssp C---CSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCC-SCCSSCCTTCSEEECTTSC
T ss_pred C---CCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCccc-cCCccccccCCEEECCCCc
Confidence 0 011111111 113357889999999885 467778899999999999999998 4666554 89999999999
Q ss_pred ceecCCCCCCcCCCCCCcEEEccCCcccccCCCCCCCCccCcCCCCCCCEEEeecCcCcccCChhhccCCCCCCEEEccC
Q 042825 154 ISGTIPDFIGTDTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTN 233 (631)
Q Consensus 154 l~g~ip~~~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~~~~~~~~l~~L~~L~L~~N~l~g~iP~~~~~~l~~L~~L~ls~ 233 (631)
+++..|..+. .+++|+.|+|++|++++..|.. +.++++|++|+|++|+++ .+|.. +..+++|++|++++
T Consensus 204 l~~~~~~~~~--~l~~L~~L~Ls~n~l~~~~~~~-------~~~l~~L~~L~L~~N~l~-~lp~~-l~~l~~L~~L~l~~ 272 (330)
T 1xku_A 204 ITKVDAASLK--GLNNLAKLGLSFNSISAVDNGS-------LANTPHLRELHLNNNKLV-KVPGG-LADHKYIQVVYLHN 272 (330)
T ss_dssp CCEECTGGGT--TCTTCCEEECCSSCCCEECTTT-------GGGSTTCCEEECCSSCCS-SCCTT-TTTCSSCCEEECCS
T ss_pred CCccCHHHhc--CCCCCCEEECCCCcCceeChhh-------ccCCCCCCEEECCCCcCc-cCChh-hccCCCcCEEECCC
Confidence 9988788887 7889999999999998655544 458899999999999998 78865 88889999999999
Q ss_pred CCCcccCCCCCCC-------CceEEeecCCCccc
Q 042825 234 NLLQGPTPRFNNS-------KLTVDMRTGSNCFC 260 (631)
Q Consensus 234 N~l~g~~p~~~~~-------~~~~~l~~~~n~~~ 260 (631)
|.+++..+..+.. .....+++++|.+.
T Consensus 273 N~i~~~~~~~f~~~~~~~~~~~l~~l~l~~N~~~ 306 (330)
T 1xku_A 273 NNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQ 306 (330)
T ss_dssp SCCCCCCTTSSSCSSCCTTSCCCSEEECCSSSSC
T ss_pred CcCCccChhhcCCcccccccccccceEeecCccc
Confidence 9998876654321 12234556777653
|
| >1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A | Back alignment and structure |
|---|
Probab=99.67 E-value=6.5e-16 Score=157.51 Aligned_cols=157 Identities=21% Similarity=0.255 Sum_probs=129.4
Q ss_pred CCeEEEEeCCCCCcccCcchhcCCccCceeecccCcccCCCC-cCcccccccccccccceecCCCCCCcCCCCCCcEEEc
Q 042825 97 GQVTNIELQDQNRKGTVPPILKKLSSMAVMYLENNQLRGPIP-SLVGSLEFFSAYEANISGTIPDFIGTDTFPQLSYLDL 175 (631)
Q Consensus 97 ~~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~L~~N~l~g~lP-~~~~~L~~L~l~~n~l~g~ip~~~~~~~l~~L~~L~L 175 (631)
..++.|+|++|.+++..|..|.++++|++|+|++|+|++.-+ ..+.+|+.|++++|+++ .+|..+. .+++|++|+|
T Consensus 31 ~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~l~~L~~L~Ls~N~l~-~l~~~~~--~l~~L~~L~l 107 (290)
T 1p9a_G 31 KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVDGTLPVLGTLDLSHNQLQ-SLPLLGQ--TLPALTVLDV 107 (290)
T ss_dssp TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEECCSCCTTCCEEECCSSCCS-SCCCCTT--TCTTCCEEEC
T ss_pred CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccCCCCCCcCCEEECCCCcCC-cCchhhc--cCCCCCEEEC
Confidence 478999999999998888899999999999999999985322 23448999999999998 7888887 8999999999
Q ss_pred cCCcccccCCCCCCCCccCcCCCCCCCEEEeecCcCcccCChhhccCCCCCCEEEccCCCCcccCCCCCC-CCceEEeec
Q 042825 176 GNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNNLLQGPTPRFNN-SKLTVDMRT 254 (631)
Q Consensus 176 s~N~l~g~iP~~~~~~~~~~~~l~~L~~L~L~~N~l~g~iP~~~~~~l~~L~~L~ls~N~l~g~~p~~~~-~~~~~~l~~ 254 (631)
++|+|+ .+|+.. +.++++|++|+|++|+++ .+|...|..+++|+.|+|++|+|++.++.... ......+++
T Consensus 108 ~~N~l~-~l~~~~------~~~l~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L 179 (290)
T 1p9a_G 108 SFNRLT-SLPLGA------LRGLGELQELYLKGNELK-TLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLL 179 (290)
T ss_dssp CSSCCC-CCCSST------TTTCTTCCEEECTTSCCC-CCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEEC
T ss_pred CCCcCc-ccCHHH------HcCCCCCCEEECCCCCCC-ccChhhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEEEC
Confidence 999999 555321 458999999999999999 46656688999999999999999987776543 445556778
Q ss_pred CCCcccCCCCC
Q 042825 255 GSNCFCLDDPG 265 (631)
Q Consensus 255 ~~n~~~~~~~~ 265 (631)
++|.+.. +|.
T Consensus 180 ~~N~l~~-ip~ 189 (290)
T 1p9a_G 180 QENSLYT-IPK 189 (290)
T ss_dssp CSSCCCC-CCT
T ss_pred CCCcCCc-cCh
Confidence 9999884 553
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* | Back alignment and structure |
|---|
Probab=99.67 E-value=1.3e-16 Score=179.65 Aligned_cols=222 Identities=14% Similarity=0.111 Sum_probs=152.6
Q ss_pred eecccceeehhhhc-c-ccchhhhhhhhhhhcccccccccc--CCCCCCCChhhHHHHHHHHHhCCCCCCCCCCCCCCCC
Q 042825 12 QLFGFPRLTFRDCM-T-ATSELEREKTERVQGDRRKKRRKI--PSASSNQSRPDAAVMQDLKASFVIPKRLKWSDPDPCQ 87 (631)
Q Consensus 12 ~~~~~~~~~~~~~~-~-~~~~~~~~~l~~l~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~k~~~~~~~~~~w~~~~~C~ 87 (631)
++.++..+.+.++. . ..+.....+|+.|++++|.+++.. |........ + ..++- ..|.
T Consensus 326 ~l~~L~~L~l~~n~~~~~~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~--------L-------~~L~L---~~n~ 387 (606)
T 3vq2_A 326 DLPFLKSLTLTMNKGSISFKKVALPSLSYLDLSRNALSFSGCCSYSDLGTNS--------L-------RHLDL---SFNG 387 (606)
T ss_dssp CCSSCCEEEEESCSSCEECCCCCCTTCCEEECCSSCEEEEEECCHHHHCCSC--------C-------CEEEC---CSCS
T ss_pred CCCccceeeccCCcCccchhhccCCCCCEEECcCCccCCCcchhhhhccCCc--------c-------cEeEC---CCCc
Confidence 66677777777662 2 223446789999999999998542 221111100 0 00000 1111
Q ss_pred cccee--eCCCCCeEEEEeCCCCCcccCc-chhcCCccCceeecccCcccCCCCcCcc---ccccccccccccee-cCCC
Q 042825 88 WSHVI--CSDDGQVTNIELQDQNRKGTVP-PILKKLSSMAVMYLENNQLRGPIPSLVG---SLEFFSAYEANISG-TIPD 160 (631)
Q Consensus 88 w~gv~--C~~~~~l~~l~l~~n~l~g~ip-~~~~~l~~L~~L~L~~N~l~g~lP~~~~---~L~~L~l~~n~l~g-~ip~ 160 (631)
..++. .....+++.|++++|.+.+..| ..+.++++|++|++++|.+++.+|..+. +|+.|++++|++++ .+|.
T Consensus 388 l~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~ 467 (606)
T 3vq2_A 388 AIIMSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSN 467 (606)
T ss_dssp EEEECCCCTTCTTCCEEECTTSEEESTTTTTTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECS
T ss_pred cccchhhccCCCCCCeeECCCCccCCccChhhhhccccCCEEECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHH
Confidence 11111 0123578888888888887777 5788888888899988888887777665 78888888888887 4777
Q ss_pred CCCcCCCCCCcEEEccCCcccccCCCCCCCCccCcCCCCCCCEEEeecCcCcccCChhhccCCCCCCEEEccCCCCcccC
Q 042825 161 FIGTDTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNNLLQGPT 240 (631)
Q Consensus 161 ~~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~~~~~~~~l~~L~~L~L~~N~l~g~iP~~~~~~l~~L~~L~ls~N~l~g~~ 240 (631)
.++ .+++|+.|+|++|++++..|..+ +++++|++|+|++|++++.+|.. +..+++|+.|+|++|+|+..+
T Consensus 468 ~~~--~l~~L~~L~Ls~n~l~~~~~~~~-------~~l~~L~~L~Ls~N~l~~~~~~~-~~~l~~L~~L~l~~N~l~~~p 537 (606)
T 3vq2_A 468 VFA--NTTNLTFLDLSKCQLEQISWGVF-------DTLHRLQLLNMSHNNLLFLDSSH-YNQLYSLSTLDCSFNRIETSK 537 (606)
T ss_dssp CCT--TCTTCCEEECTTSCCCEECTTTT-------TTCTTCCEEECCSSCCSCEEGGG-TTTCTTCCEEECTTSCCCCEE
T ss_pred hhc--cCCCCCEEECCCCcCCccChhhh-------cccccCCEEECCCCcCCCcCHHH-ccCCCcCCEEECCCCcCcccC
Confidence 777 78888999999998887666554 48888999999999988776754 888888999999999888544
Q ss_pred CCCCCCC-ceEEeecCCCcccC
Q 042825 241 PRFNNSK-LTVDMRTGSNCFCL 261 (631)
Q Consensus 241 p~~~~~~-~~~~l~~~~n~~~~ 261 (631)
+.+.... ....+++++|.+..
T Consensus 538 ~~~~~l~~~L~~l~l~~N~~~c 559 (606)
T 3vq2_A 538 GILQHFPKSLAFFNLTNNSVAC 559 (606)
T ss_dssp SCGGGSCTTCCEEECCSCCCCC
T ss_pred HhHhhhcccCcEEEccCCCccc
Confidence 4433322 24556678887754
|
| >3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus} | Back alignment and structure |
|---|
Probab=99.67 E-value=5.2e-16 Score=152.53 Aligned_cols=134 Identities=20% Similarity=0.264 Sum_probs=117.5
Q ss_pred CCeEEEEeCCCCCcccCcchhcCCccCceeecccCcccCCCCcCc---ccccccccccccceecCCCCCCcCCCCCCcEE
Q 042825 97 GQVTNIELQDQNRKGTVPPILKKLSSMAVMYLENNQLRGPIPSLV---GSLEFFSAYEANISGTIPDFIGTDTFPQLSYL 173 (631)
Q Consensus 97 ~~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~L~~N~l~g~lP~~~---~~L~~L~l~~n~l~g~ip~~~~~~~l~~L~~L 173 (631)
.+++.|+|++|.+++..|..|.++++|++|+|++|+|++..+..+ .+|+.|+|++|++++..+..+. .+++|++|
T Consensus 40 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~--~l~~L~~L 117 (229)
T 3e6j_A 40 TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTNQLTVLPSAVFD--RLVHLKEL 117 (229)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTT--TCTTCCEE
T ss_pred CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCCCcCCccChhHhC--cchhhCeE
Confidence 589999999999999889999999999999999999974433433 3899999999999976666677 89999999
Q ss_pred EccCCcccccCCCCCCCCccCcCCCCCCCEEEeecCcCcccCChhhccCCCCCCEEEccCCCCcccCC
Q 042825 174 DLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNNLLQGPTP 241 (631)
Q Consensus 174 ~Ls~N~l~g~iP~~~~~~~~~~~~l~~L~~L~L~~N~l~g~iP~~~~~~l~~L~~L~ls~N~l~g~~p 241 (631)
+|++|+|+ .+|..+ .++++|++|+|++|+|+ .+|...|..+++|+.|+|++|.+++..+
T Consensus 118 ~Ls~N~l~-~lp~~~-------~~l~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 176 (229)
T 3e6j_A 118 FMCCNKLT-ELPRGI-------ERLTHLTHLALDQNQLK-SIPHGAFDRLSSLTHAYLFGNPWDCECR 176 (229)
T ss_dssp ECCSSCCC-SCCTTG-------GGCTTCSEEECCSSCCC-CCCTTTTTTCTTCCEEECTTSCBCTTBG
T ss_pred eccCCccc-ccCccc-------ccCCCCCEEECCCCcCC-ccCHHHHhCCCCCCEEEeeCCCccCCcc
Confidence 99999999 898765 58999999999999999 5665668999999999999999998765
|
| >1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.67 E-value=5.1e-17 Score=167.50 Aligned_cols=158 Identities=18% Similarity=0.178 Sum_probs=127.8
Q ss_pred CCCeEEEEeCCCCCcccCcchhcCC-----ccCceeecccCcccCCCCcCcc---cccccccccccceec--CCCCCCcC
Q 042825 96 DGQVTNIELQDQNRKGTVPPILKKL-----SSMAVMYLENNQLRGPIPSLVG---SLEFFSAYEANISGT--IPDFIGTD 165 (631)
Q Consensus 96 ~~~l~~l~l~~n~l~g~ip~~~~~l-----~~L~~L~L~~N~l~g~lP~~~~---~L~~L~l~~n~l~g~--ip~~~~~~ 165 (631)
..+++.|+|++|.+++. |..++.+ ++|++|+|++|++++..|..++ +|+.|++++|++.|. +|..+...
T Consensus 120 l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~ 198 (312)
T 1wwl_A 120 GPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISALCPL 198 (312)
T ss_dssp SCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHHHSCTT
T ss_pred CCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHHHHHhc
Confidence 45899999999999987 8888887 9999999999999987777765 899999999999876 34444112
Q ss_pred CCCCCcEEEccCCcccc--cCCCCCCCCccCcCCCCCCCEEEeecCcCcccCChhhccCCCCCCEEEccCCCCcccCCCC
Q 042825 166 TFPQLSYLDLGNNNLQG--TIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNNLLQGPTPRF 243 (631)
Q Consensus 166 ~l~~L~~L~Ls~N~l~g--~iP~~~~~~~~~~~~l~~L~~L~L~~N~l~g~iP~~~~~~l~~L~~L~ls~N~l~g~~p~~ 243 (631)
.+++|++|+|++|++++ .+|..+ +.++++|++|+|++|++++.+|...+..+++|++|+|++|.|+ .+|..
T Consensus 199 ~l~~L~~L~L~~N~l~~~~~~~~~~------~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~ 271 (312)
T 1wwl_A 199 KFPTLQVLALRNAGMETPSGVCSAL------AAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKG 271 (312)
T ss_dssp SCTTCCEEECTTSCCCCHHHHHHHH------HHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCCSS
T ss_pred cCCCCCEEECCCCcCcchHHHHHHH------HhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC-hhhhh
Confidence 78999999999999983 233221 3477999999999999998776555777899999999999999 56654
Q ss_pred CCCCceEEeecCCCcccCC
Q 042825 244 NNSKLTVDMRTGSNCFCLD 262 (631)
Q Consensus 244 ~~~~~~~~l~~~~n~~~~~ 262 (631)
.. .....+++++|++++.
T Consensus 272 ~~-~~L~~L~Ls~N~l~~~ 289 (312)
T 1wwl_A 272 LP-AKLSVLDLSYNRLDRN 289 (312)
T ss_dssp CC-SEEEEEECCSSCCCSC
T ss_pred cc-CCceEEECCCCCCCCC
Confidence 43 4566788899999874
|
| >1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* | Back alignment and structure |
|---|
Probab=99.66 E-value=9.7e-16 Score=159.06 Aligned_cols=153 Identities=22% Similarity=0.306 Sum_probs=119.9
Q ss_pred CCeEEEEeCCCCCcccCcchhcCCccCceeecccCcccC--CCCcCcc---cccccccccccceecCCCCCCcCCCCCCc
Q 042825 97 GQVTNIELQDQNRKGTVPPILKKLSSMAVMYLENNQLRG--PIPSLVG---SLEFFSAYEANISGTIPDFIGTDTFPQLS 171 (631)
Q Consensus 97 ~~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~L~~N~l~g--~lP~~~~---~L~~L~l~~n~l~g~ip~~~~~~~l~~L~ 171 (631)
.+++.|++++|.+++..+..+.++++|++|+|++|.++. ..|..+. +|+.|++++|+++ .+|..+. ++|+
T Consensus 121 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~-~l~~~~~----~~L~ 195 (330)
T 1xku_A 121 KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNIT-TIPQGLP----PSLT 195 (330)
T ss_dssp TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCC-SCCSSCC----TTCS
T ss_pred ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCccc-cCCcccc----ccCC
Confidence 478889999999987777778899999999999998853 5555544 7889999999988 4776543 6899
Q ss_pred EEEccCCcccccCCCCCCCCccCcCCCCCCCEEEeecCcCcccCChhhccCCCCCCEEEccCCCCcccCCCCCCCCceEE
Q 042825 172 YLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNNLLQGPTPRFNNSKLTVD 251 (631)
Q Consensus 172 ~L~Ls~N~l~g~iP~~~~~~~~~~~~l~~L~~L~L~~N~l~g~iP~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~~~~~~ 251 (631)
+|+|++|++++..|.. +.++++|++|+|++|++++..|. .+..+++|+.|+|++|.++..+..+........
T Consensus 196 ~L~l~~n~l~~~~~~~-------~~~l~~L~~L~Ls~n~l~~~~~~-~~~~l~~L~~L~L~~N~l~~lp~~l~~l~~L~~ 267 (330)
T 1xku_A 196 ELHLDGNKITKVDAAS-------LKGLNNLAKLGLSFNSISAVDNG-SLANTPHLRELHLNNNKLVKVPGGLADHKYIQV 267 (330)
T ss_dssp EEECTTSCCCEECTGG-------GTTCTTCCEEECCSSCCCEECTT-TGGGSTTCCEEECCSSCCSSCCTTTTTCSSCCE
T ss_pred EEECCCCcCCccCHHH-------hcCCCCCCEEECCCCcCceeChh-hccCCCCCCEEECCCCcCccCChhhccCCCcCE
Confidence 9999999998665644 45889999999999999965554 488899999999999999954444444455566
Q ss_pred eecCCCcccCC
Q 042825 252 MRTGSNCFCLD 262 (631)
Q Consensus 252 l~~~~n~~~~~ 262 (631)
+++++|.+++-
T Consensus 268 L~l~~N~i~~~ 278 (330)
T 1xku_A 268 VYLHNNNISAI 278 (330)
T ss_dssp EECCSSCCCCC
T ss_pred EECCCCcCCcc
Confidence 77899998873
|
| >3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A | Back alignment and structure |
|---|
Probab=99.66 E-value=4.4e-16 Score=169.03 Aligned_cols=163 Identities=20% Similarity=0.264 Sum_probs=110.9
Q ss_pred ccceeeCCC----------CCeEEEEeCCCCCcccCcchhcCCccCceeecccCcccCCCCcCcc---cccccccccccc
Q 042825 88 WSHVICSDD----------GQVTNIELQDQNRKGTVPPILKKLSSMAVMYLENNQLRGPIPSLVG---SLEFFSAYEANI 154 (631)
Q Consensus 88 w~gv~C~~~----------~~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~L~~N~l~g~lP~~~~---~L~~L~l~~n~l 154 (631)
|..|.|... .+++.|+|++|++++..|..|.++++|++|+|++|+|++..|..+. +|+.|+|++|++
T Consensus 56 ~~~v~c~~~~l~~iP~~~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l 135 (452)
T 3zyi_A 56 FSKVVCTRRGLSEVPQGIPSNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWL 135 (452)
T ss_dssp SCEEECCSSCCSSCCSCCCTTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCC
T ss_pred CcEEEECCCCcCccCCCCCCCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcC
Confidence 568888642 3789999999999998899999999999999999999977766665 899999999999
Q ss_pred eecCCCCCCcCCCCCCcEEEccCCcccccCCCCCCCCccCcCCCCCCCEEEeecCcCcccCChhhccCCCCCCEEEccCC
Q 042825 155 SGTIPDFIGTDTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNN 234 (631)
Q Consensus 155 ~g~ip~~~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~~~~~~~~l~~L~~L~L~~N~l~g~iP~~~~~~l~~L~~L~ls~N 234 (631)
++..+..+. .+++|++|+|++|+++ .+|... +.++++|+.|+|++|+..+.+|...|..+++|++|+|++|
T Consensus 136 ~~~~~~~~~--~l~~L~~L~L~~N~l~-~~~~~~------~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n 206 (452)
T 3zyi_A 136 TVIPSGAFE--YLSKLRELWLRNNPIE-SIPSYA------FNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMC 206 (452)
T ss_dssp SBCCTTTSS--SCTTCCEEECCSCCCC-EECTTT------TTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTS
T ss_pred CccChhhhc--ccCCCCEEECCCCCcc-eeCHhH------HhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCC
Confidence 976666677 8999999999999999 565432 2344455555555433333444333444444455554444
Q ss_pred CCcccCCCCCCCCceEEeecCCCccc
Q 042825 235 LLQGPTPRFNNSKLTVDMRTGSNCFC 260 (631)
Q Consensus 235 ~l~g~~p~~~~~~~~~~l~~~~n~~~ 260 (631)
.+++. |.+........+++++|.+.
T Consensus 207 ~l~~~-~~~~~l~~L~~L~Ls~N~l~ 231 (452)
T 3zyi_A 207 NIKDM-PNLTPLVGLEELEMSGNHFP 231 (452)
T ss_dssp CCSSC-CCCTTCTTCCEEECTTSCCS
T ss_pred ccccc-ccccccccccEEECcCCcCc
Confidence 44432 33322222333344444443
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.66 E-value=1.1e-16 Score=174.78 Aligned_cols=155 Identities=16% Similarity=0.113 Sum_probs=89.0
Q ss_pred CCeEEEEeCCCCCcccCcchhcCCccCceeecccCcccCCCCcCc---ccccccccccccceecCCCCCCcCCCCCCcEE
Q 042825 97 GQVTNIELQDQNRKGTVPPILKKLSSMAVMYLENNQLRGPIPSLV---GSLEFFSAYEANISGTIPDFIGTDTFPQLSYL 173 (631)
Q Consensus 97 ~~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~L~~N~l~g~lP~~~---~~L~~L~l~~n~l~g~ip~~~~~~~l~~L~~L 173 (631)
.+++.|+|++|.+++..|..|.++++|+.|+|++|++++..+..+ .+|+.|++++|++++..+..+. .+++|+.|
T Consensus 128 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~--~l~~L~~L 205 (477)
T 2id5_A 128 YNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFK--RLYRLKVL 205 (477)
T ss_dssp TTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHHHHTTCTTCCEEEEESCCCCEECTTCSC--SCTTCCEE
T ss_pred ccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCcccChhHhcccCCCcEEeCCCCcCcEeChhhcc--cCccccee
Confidence 356666666666666666666666667777777766664332222 3667777777777766565665 66777777
Q ss_pred EccCCcccccCCCCCCCCccCcCCCCCCCEEEeecCcCcccCChhhccCCCCCCEEEccCCCCcccCCCCC-CCCceEEe
Q 042825 174 DLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNNLLQGPTPRFN-NSKLTVDM 252 (631)
Q Consensus 174 ~Ls~N~l~g~iP~~~~~~~~~~~~l~~L~~L~L~~N~l~g~iP~~~~~~l~~L~~L~ls~N~l~g~~p~~~-~~~~~~~l 252 (631)
+|++|.+.+.+|..+. ...+|+.|+|++|+++ .+|...+..+++|+.|+|++|.+++..+... .......+
T Consensus 206 ~l~~~~~~~~~~~~~~-------~~~~L~~L~l~~n~l~-~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L 277 (477)
T 2id5_A 206 EISHWPYLDTMTPNCL-------YGLNLTSLSITHCNLT-AVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEI 277 (477)
T ss_dssp EEECCTTCCEECTTTT-------TTCCCSEEEEESSCCC-SCCHHHHTTCTTCCEEECCSSCCCEECTTSCTTCTTCCEE
T ss_pred eCCCCccccccCcccc-------cCccccEEECcCCccc-ccCHHHhcCccccCeeECCCCcCCccChhhccccccCCEE
Confidence 7777766666665432 2335555555555555 3444345555555555555555555444322 22223334
Q ss_pred ecCCCcccC
Q 042825 253 RTGSNCFCL 261 (631)
Q Consensus 253 ~~~~n~~~~ 261 (631)
++++|.+.+
T Consensus 278 ~L~~n~l~~ 286 (477)
T 2id5_A 278 QLVGGQLAV 286 (477)
T ss_dssp ECCSSCCSE
T ss_pred ECCCCccce
Confidence 445555544
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=99.66 E-value=8.4e-17 Score=176.26 Aligned_cols=209 Identities=16% Similarity=0.102 Sum_probs=154.2
Q ss_pred ccceeehhhhcc----ccchhhhhhhhhhhccccccccccCCCCCCCChhhHHHHHHHHHhCCCCCCCCCCCCCCCCccc
Q 042825 15 GFPRLTFRDCMT----ATSELEREKTERVQGDRRKKRRKIPSASSNQSRPDAAVMQDLKASFVIPKRLKWSDPDPCQWSH 90 (631)
Q Consensus 15 ~~~~~~~~~~~~----~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~k~~~~~~~~~~w~~~~~C~w~g 90 (631)
+++.|.+.++.. +.....+.+|+.|++++|.+++.+| ..... .+..-.-+.|...+
T Consensus 35 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~------------------~L~~L~Ls~N~l~~ 94 (487)
T 3oja_A 35 NVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLS------------------TLRTLDLNNNYVQE 94 (487)
T ss_dssp GCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCT------------------TCCEEECCSSEEEE
T ss_pred CccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCC------------------CCCEEEecCCcCCC
Confidence 677777777642 2234467999999999999997665 22111 01110011233444
Q ss_pred eeeCCCCCeEEEEeCCCCCcccCcchhcCCccCceeecccCcccCCCCcCcc---cccccccccccceecCCCCCCcCCC
Q 042825 91 VICSDDGQVTNIELQDQNRKGTVPPILKKLSSMAVMYLENNQLRGPIPSLVG---SLEFFSAYEANISGTIPDFIGTDTF 167 (631)
Q Consensus 91 v~C~~~~~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~L~~N~l~g~lP~~~~---~L~~L~l~~n~l~g~ip~~~~~~~l 167 (631)
+.- ..+++.|+|++|.+++..+. .+++|+.|+|++|.|++..|..++ +|+.|++++|++++.+|..+.. .+
T Consensus 95 l~~--~~~L~~L~L~~N~l~~~~~~---~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~-~l 168 (487)
T 3oja_A 95 LLV--GPSIETLHAANNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAA-SS 168 (487)
T ss_dssp EEE--CTTCCEEECCSSCCCCEEEC---CCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGG-GT
T ss_pred CCC--CCCcCEEECcCCcCCCCCcc---ccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhh-hC
Confidence 332 25799999999999976554 467899999999999988777664 8999999999999988887742 58
Q ss_pred CCCcEEEccCCcccccCCCCCCCCccCcCCCCCCCEEEeecCcCcccCChhhccCCCCCCEEEccCCCCcccCCCCCCCC
Q 042825 168 PQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNNLLQGPTPRFNNSK 247 (631)
Q Consensus 168 ~~L~~L~Ls~N~l~g~iP~~~~~~~~~~~~l~~L~~L~L~~N~l~g~iP~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~~ 247 (631)
++|+.|+|++|.|++. |.. ..+++|+.|+|++|+|++ +|+. +..+++|+.|+|++|.|++.++.+....
T Consensus 169 ~~L~~L~Ls~N~l~~~-~~~--------~~l~~L~~L~Ls~N~l~~-~~~~-~~~l~~L~~L~Ls~N~l~~lp~~l~~l~ 237 (487)
T 3oja_A 169 DTLEHLNLQYNFIYDV-KGQ--------VVFAKLKTLDLSSNKLAF-MGPE-FQSAAGVTWISLRNNKLVLIEKALRFSQ 237 (487)
T ss_dssp TTCCEEECTTSCCCEE-ECC--------CCCTTCCEEECCSSCCCE-ECGG-GGGGTTCSEEECTTSCCCEECTTCCCCT
T ss_pred CcccEEecCCCccccc-ccc--------ccCCCCCEEECCCCCCCC-CCHh-HcCCCCccEEEecCCcCcccchhhccCC
Confidence 9999999999999954 432 368999999999999996 5555 8899999999999999998655554444
Q ss_pred ceEEeecCCCccc
Q 042825 248 LTVDMRTGSNCFC 260 (631)
Q Consensus 248 ~~~~l~~~~n~~~ 260 (631)
....+++++|.+.
T Consensus 238 ~L~~L~l~~N~l~ 250 (487)
T 3oja_A 238 NLEHFDLRGNGFH 250 (487)
T ss_dssp TCCEEECTTCCBC
T ss_pred CCCEEEcCCCCCc
Confidence 5556777888875
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.66 E-value=2.8e-17 Score=181.60 Aligned_cols=211 Identities=16% Similarity=0.160 Sum_probs=155.5
Q ss_pred hhhhhhhccccccccccCCCC-----CCCChhhH------------HHHHHHHHhCCCCCCCCCCCCCCCCccceee-CC
Q 042825 34 EKTERVQGDRRKKRRKIPSAS-----SNQSRPDA------------AVMQDLKASFVIPKRLKWSDPDPCQWSHVIC-SD 95 (631)
Q Consensus 34 ~~l~~l~~~~~~~~~~~~~~~-----~~~~~~~~------------~~l~~~k~~~~~~~~~~w~~~~~C~w~gv~C-~~ 95 (631)
.+|+.|++++|++++.+|... ......+. ..+..+-... .-..++- +.|...++.| ..
T Consensus 247 ~~L~~L~l~~n~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~~~~p~~~~~~~~~~~-~L~~L~l---~~n~l~~~~~~~~ 322 (520)
T 2z7x_B 247 TTVWYFSISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVFGFPQSYIYEIFSNM-NIKNFTV---SGTRMVHMLCPSK 322 (520)
T ss_dssp SSCSEEEEEEEEEESCCCCCCCCCCSCCCCEEEEEEEEECCCCSCTHHHHHHHHTC-CCSEEEE---ESSCCCCCCCCSS
T ss_pred CcccEEEeecccccCccccchhhcccccCceeEeccccccceecchhhhhcccccC-ceeEEEc---CCCccccccchhh
Confidence 489999999999999999876 33221100 1111110000 0000000 1122222333 24
Q ss_pred CCCeEEEEeCCCCCcccCcchhcCCccCceeecccCcccC--CCCcCc---ccccccccccccceecCCCC-CCcCCCCC
Q 042825 96 DGQVTNIELQDQNRKGTVPPILKKLSSMAVMYLENNQLRG--PIPSLV---GSLEFFSAYEANISGTIPDF-IGTDTFPQ 169 (631)
Q Consensus 96 ~~~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~L~~N~l~g--~lP~~~---~~L~~L~l~~n~l~g~ip~~-~~~~~l~~ 169 (631)
..+++.|+|++|.+++.+|..++++++|++|+|++|++++ .+|..+ .+|+.|++++|++++.+|.. +. .+++
T Consensus 323 l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~--~l~~ 400 (520)
T 2z7x_B 323 ISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCS--WTKS 400 (520)
T ss_dssp CCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCC--CCTT
T ss_pred CCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhc--cCcc
Confidence 4689999999999999999999999999999999999996 566544 48999999999999878865 55 7899
Q ss_pred CcEEEccCCcccccCCCCCCCCccCcCCCCCCCEEEeecCcCcccCChhhccCCCCCCEEEccCCCCcccCCC-CCCCCc
Q 042825 170 LSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNNLLQGPTPR-FNNSKL 248 (631)
Q Consensus 170 L~~L~Ls~N~l~g~iP~~~~~~~~~~~~l~~L~~L~L~~N~l~g~iP~~~~~~l~~L~~L~ls~N~l~g~~p~-~~~~~~ 248 (631)
|+.|+|++|++++.+|..++ ++|++|+|++|+++ .+|.. +..+++|+.|+|++|+|+...+. +.....
T Consensus 401 L~~L~Ls~N~l~~~~~~~l~---------~~L~~L~Ls~N~l~-~ip~~-~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~ 469 (520)
T 2z7x_B 401 LLSLNMSSNILTDTIFRCLP---------PRIKVLDLHSNKIK-SIPKQ-VVKLEALQELNVASNQLKSVPDGIFDRLTS 469 (520)
T ss_dssp CCEEECCSSCCCGGGGGSCC---------TTCCEEECCSSCCC-CCCGG-GGGCTTCCEEECCSSCCCCCCTTTTTTCTT
T ss_pred CCEEECcCCCCCcchhhhhc---------ccCCEEECCCCccc-ccchh-hhcCCCCCEEECCCCcCCccCHHHhccCCc
Confidence 99999999999988886542 79999999999999 89976 56999999999999999965554 444445
Q ss_pred eEEeecCCCcccC
Q 042825 249 TVDMRTGSNCFCL 261 (631)
Q Consensus 249 ~~~l~~~~n~~~~ 261 (631)
...+++++|++.+
T Consensus 470 L~~L~l~~N~~~c 482 (520)
T 2z7x_B 470 LQKIWLHTNPWDC 482 (520)
T ss_dssp CCEEECCSSCBCC
T ss_pred ccEEECcCCCCcc
Confidence 5667889998875
|
| >2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus} | Back alignment and structure |
|---|
Probab=99.66 E-value=7.6e-16 Score=160.03 Aligned_cols=153 Identities=24% Similarity=0.327 Sum_probs=113.6
Q ss_pred CCeEEEEeCCCCCcccCcchhcCCccCceeecccCccc--CCCCcCcc--cccccccccccceecCCCCCCcCCCCCCcE
Q 042825 97 GQVTNIELQDQNRKGTVPPILKKLSSMAVMYLENNQLR--GPIPSLVG--SLEFFSAYEANISGTIPDFIGTDTFPQLSY 172 (631)
Q Consensus 97 ~~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~L~~N~l~--g~lP~~~~--~L~~L~l~~n~l~g~ip~~~~~~~l~~L~~ 172 (631)
.+++.|++++|.+++..+..+.++++|++|++++|.++ +..|..+. +|+.|++++|++++ +|..+. ++|++
T Consensus 123 ~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~L~~L~l~~n~l~~-l~~~~~----~~L~~ 197 (332)
T 2ft3_A 123 SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGLKLNYLRISEAKLTG-IPKDLP----ETLNE 197 (332)
T ss_dssp TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSCCCSCCBCCSSBCSS-CCSSSC----SSCSC
T ss_pred ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCCccCEEECcCCCCCc-cCcccc----CCCCE
Confidence 46888888888888655556888888888888888885 35555555 78888888888875 676543 57888
Q ss_pred EEccCCcccccCCCCCCCCccCcCCCCCCCEEEeecCcCcccCChhhccCCCCCCEEEccCCCCcccCCCCCCCCceEEe
Q 042825 173 LDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNNLLQGPTPRFNNSKLTVDM 252 (631)
Q Consensus 173 L~Ls~N~l~g~iP~~~~~~~~~~~~l~~L~~L~L~~N~l~g~iP~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~~~~~~l 252 (631)
|+|++|.+++..|.. +.++++|++|+|++|++++..| ..+..+++|+.|+|++|+++..++.+........+
T Consensus 198 L~l~~n~i~~~~~~~-------l~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~~lp~~l~~l~~L~~L 269 (332)
T 2ft3_A 198 LHLDHNKIQAIELED-------LLRYSKLYRLGLGHNQIRMIEN-GSLSFLPTLRELHLDNNKLSRVPAGLPDLKLLQVV 269 (332)
T ss_dssp CBCCSSCCCCCCTTS-------STTCTTCSCCBCCSSCCCCCCT-TGGGGCTTCCEEECCSSCCCBCCTTGGGCTTCCEE
T ss_pred EECCCCcCCccCHHH-------hcCCCCCCEEECCCCcCCcCCh-hHhhCCCCCCEEECCCCcCeecChhhhcCccCCEE
Confidence 888888888554444 4588889999999999986544 34888889999999999988433334334445567
Q ss_pred ecCCCcccCC
Q 042825 253 RTGSNCFCLD 262 (631)
Q Consensus 253 ~~~~n~~~~~ 262 (631)
++++|.++..
T Consensus 270 ~l~~N~l~~~ 279 (332)
T 2ft3_A 270 YLHTNNITKV 279 (332)
T ss_dssp ECCSSCCCBC
T ss_pred ECCCCCCCcc
Confidence 7788888763
|
| >2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A | Back alignment and structure |
|---|
Probab=99.66 E-value=9.1e-17 Score=167.26 Aligned_cols=147 Identities=16% Similarity=0.192 Sum_probs=105.2
Q ss_pred cCCcccceeecCCCceEEEEEEecCCcEEEEEEEecCCC------CHHHHHHHHHHHHHHhcCCh---------------
Q 042825 417 TNNFSEENRLGRGGVGTVYKGELKDGTEVGVKRMELGSV------TEQGIAQFESEITVLTKGTL--------------- 475 (631)
Q Consensus 417 t~~f~~~~~iG~G~fg~Vyk~~~~~g~~vAvK~l~~~~~------~~~~~~~~~~Ei~~l~~gsL--------------- 475 (631)
.++|...+.||+|+||+||+|+. +|+.||||++..... .....+.+.+|++++++-..
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l 97 (336)
T 2vuw_A 19 TEKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGL 97 (336)
T ss_dssp HHHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCE
T ss_pred cccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhh
Confidence 35688899999999999999998 689999999986532 12234667788777654110
Q ss_pred ----------hHHhHh-----------------------------hhhcC-------CCCCCHHHHHHHHHHhhcC----
Q 042825 476 ----------GRHLFN-----------------------------WEEEG-------LEPLEWNTRLNIALDVARG---- 505 (631)
Q Consensus 476 ----------~~~L~~-----------------------------~~~~~-------~~~L~~~~~~~I~~~ia~g---- 505 (631)
+.++.. +...+ ...+++.....|+.+++.|
T Consensus 98 ~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~~~~~~~~~~~i~~qi~~aL~~l 177 (336)
T 2vuw_A 98 NSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRTKLSSLATAKSILHQLTASLAVA 177 (336)
T ss_dssp EEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTTTCCCHHHHHHHHHHHHHHHHHH
T ss_pred cceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHhcCCCHHHHHHHHHHHHHHHHHH
Confidence 011100 00000 1346777777777776654
Q ss_pred ---------------------C--------------------CcEEEeeccccccCCCCccccccccccCcccccccccc
Q 042825 506 ---------------------D--------------------DMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIV 544 (631)
Q Consensus 506 ---------------------~--------------------~~kl~DFGla~~~~~~~~~~~~~~~~gt~~Y~aPE~~~ 544 (631)
+ .+||+|||+|+.... ...+||+.|+|||++.
T Consensus 178 H~~~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~-------~~~~gt~~y~aPE~~~ 250 (336)
T 2vuw_A 178 EASLRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERD-------GIVVFCDVSMDEDLFT 250 (336)
T ss_dssp HHHHCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEET-------TEEECCCCTTCSGGGC
T ss_pred HHhCCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCC-------CcEEEeecccChhhhc
Confidence 3 689999999997642 1347999999999998
Q ss_pred cCCCCchhhHHHHHHH-HHHHHcCCCCCC
Q 042825 545 TGRITAKVDVYSFGMI-LMDLITGRKVVD 572 (631)
Q Consensus 545 ~~~~~~k~DVwS~Gvv-L~ElltG~~P~~ 572 (631)
+.. +.++||||+|++ .+++++|..||.
T Consensus 251 g~~-~~~~Diwsl~~~~~~~~~~g~~p~~ 278 (336)
T 2vuw_A 251 GDG-DYQFDIYRLMKKENNNRWGEYHPYS 278 (336)
T ss_dssp CCS-SHHHHHHHHHHHHHTTCTTSCCTHH
T ss_pred CCC-ccceehhhhhCCCCcccccccCCCc
Confidence 666 899999998777 778899999985
|
| >2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.66 E-value=1.1e-16 Score=168.43 Aligned_cols=165 Identities=19% Similarity=0.229 Sum_probs=126.1
Q ss_pred CCccceeeCCC----------CCeEEEEeCCCCCcccCcchhc-CCccCceeecccCcccCCCCcCcc---ccccccccc
Q 042825 86 CQWSHVICSDD----------GQVTNIELQDQNRKGTVPPILK-KLSSMAVMYLENNQLRGPIPSLVG---SLEFFSAYE 151 (631)
Q Consensus 86 C~w~gv~C~~~----------~~l~~l~l~~n~l~g~ip~~~~-~l~~L~~L~L~~N~l~g~lP~~~~---~L~~L~l~~ 151 (631)
|.+..+.|... ..++.|+|++|++++..+..+. ++++|++|+|++|+|++..|..+. +|+.|+|++
T Consensus 18 C~~~~l~c~~~~l~~iP~~~~~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 97 (361)
T 2xot_A 18 CASNILSCSKQQLPNVPQSLPSYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSS 97 (361)
T ss_dssp EETTEEECCSSCCSSCCSSCCTTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred ECCCEEEeCCCCcCccCccCCCCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCC
Confidence 45777888531 3578999999999976666777 899999999999999966555554 899999999
Q ss_pred ccceecCCCCCCcCCCCCCcEEEccCCcccccCCCCCCCCccCcCCCCCCCEEEeecCcCcccCChhhc---cCCCCCCE
Q 042825 152 ANISGTIPDFIGTDTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSF---NNHPKLTT 228 (631)
Q Consensus 152 n~l~g~ip~~~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~~~~~~~~l~~L~~L~L~~N~l~g~iP~~~~---~~l~~L~~ 228 (631)
|++++..+..+. .+++|+.|+|++|++++..|.. +.++++|+.|+|++|+|+ .+|...| ..+++|+.
T Consensus 98 N~l~~~~~~~~~--~l~~L~~L~L~~N~i~~~~~~~-------~~~l~~L~~L~L~~N~l~-~l~~~~~~~~~~l~~L~~ 167 (361)
T 2xot_A 98 NHLHTLDEFLFS--DLQALEVLLLYNNHIVVVDRNA-------FEDMAQLQKLYLSQNQIS-RFPVELIKDGNKLPKLML 167 (361)
T ss_dssp SCCCEECTTTTT--TCTTCCEEECCSSCCCEECTTT-------TTTCTTCCEEECCSSCCC-SCCGGGTC----CTTCCE
T ss_pred CcCCcCCHHHhC--CCcCCCEEECCCCcccEECHHH-------hCCcccCCEEECCCCcCC-eeCHHHhcCcccCCcCCE
Confidence 999977677777 8899999999999999655555 458999999999999999 5776655 56899999
Q ss_pred EEccCCCCcccCCCCCC-CCc--eEEeecCCCccc
Q 042825 229 LNLTNNLLQGPTPRFNN-SKL--TVDMRTGSNCFC 260 (631)
Q Consensus 229 L~ls~N~l~g~~p~~~~-~~~--~~~l~~~~n~~~ 260 (631)
|+|++|+|++..+.... ... ...+++++|.+.
T Consensus 168 L~L~~N~l~~l~~~~~~~l~~~~l~~l~l~~N~~~ 202 (361)
T 2xot_A 168 LDLSSNKLKKLPLTDLQKLPAWVKNGLYLHNNPLE 202 (361)
T ss_dssp EECCSSCCCCCCHHHHHHSCHHHHTTEECCSSCEE
T ss_pred EECCCCCCCccCHHHhhhccHhhcceEEecCCCcc
Confidence 99999999876543211 111 123556888764
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* | Back alignment and structure |
|---|
Probab=99.66 E-value=1.2e-16 Score=179.92 Aligned_cols=158 Identities=15% Similarity=0.128 Sum_probs=95.3
Q ss_pred CCeEEEEeCCCCCcccC--cchhcCCccCceeecccCcccCCCCcCcc---cccccccccccceecCCCC-CCcCCCCCC
Q 042825 97 GQVTNIELQDQNRKGTV--PPILKKLSSMAVMYLENNQLRGPIPSLVG---SLEFFSAYEANISGTIPDF-IGTDTFPQL 170 (631)
Q Consensus 97 ~~l~~l~l~~n~l~g~i--p~~~~~l~~L~~L~L~~N~l~g~lP~~~~---~L~~L~l~~n~l~g~ip~~-~~~~~l~~L 170 (631)
.+++.|++++|.+++.. |..+.++++|++|+|++|.+++..|..+. +|+.|++++|++++..|.. +. .+++|
T Consensus 350 ~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~--~l~~L 427 (606)
T 3t6q_A 350 ENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQ--NLHLL 427 (606)
T ss_dssp TTCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEECCTTCCTTT--TCTTC
T ss_pred CcCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCCCcccchhhh--CcccC
Confidence 35666666666666543 55566666666666666666655555443 5666666666666555443 44 56666
Q ss_pred cEEEccCCcccccCCCCCCCCccCcCCCCCCCEEEeecCcCccc-CCh-hhccCCCCCCEEEccCCCCcccCCCCC-CCC
Q 042825 171 SYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGI-FPV-SSFNNHPKLTTLNLTNNLLQGPTPRFN-NSK 247 (631)
Q Consensus 171 ~~L~Ls~N~l~g~iP~~~~~~~~~~~~l~~L~~L~L~~N~l~g~-iP~-~~~~~l~~L~~L~ls~N~l~g~~p~~~-~~~ 247 (631)
+.|+|++|.+++..|.. ++++++|++|+|++|++++. +|. ..+..+++|+.|++++|.+++.+|... ...
T Consensus 428 ~~L~l~~n~l~~~~~~~-------~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~ 500 (606)
T 3t6q_A 428 KVLNLSHSLLDISSEQL-------FDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLK 500 (606)
T ss_dssp CEEECTTCCCBTTCTTT-------TTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTTTTTTCT
T ss_pred CEEECCCCccCCcCHHH-------HhCCCCCCEEECCCCCCCccccccchhhccCCCccEEECCCCccCccChhhhcccc
Confidence 66666666666554544 34677777777777777652 221 236667777777777777777666533 233
Q ss_pred ceEEeecCCCcccCCC
Q 042825 248 LTVDMRTGSNCFCLDD 263 (631)
Q Consensus 248 ~~~~l~~~~n~~~~~~ 263 (631)
....+++++|.+.+..
T Consensus 501 ~L~~L~Ls~N~l~~~~ 516 (606)
T 3t6q_A 501 MMNHVDLSHNRLTSSS 516 (606)
T ss_dssp TCCEEECCSSCCCGGG
T ss_pred CCCEEECCCCccCcCC
Confidence 4445666777766543
|
| >1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7 | Back alignment and structure |
|---|
Probab=99.65 E-value=3.6e-16 Score=149.25 Aligned_cols=129 Identities=22% Similarity=0.339 Sum_probs=107.3
Q ss_pred EEEEeCCCCCcccCcchhcCCccCceeecccCcccCCCCc-Ccc---cccccccccccceecCCCCCCcCCCCCCcEEEc
Q 042825 100 TNIELQDQNRKGTVPPILKKLSSMAVMYLENNQLRGPIPS-LVG---SLEFFSAYEANISGTIPDFIGTDTFPQLSYLDL 175 (631)
Q Consensus 100 ~~l~l~~n~l~g~ip~~~~~l~~L~~L~L~~N~l~g~lP~-~~~---~L~~L~l~~n~l~g~ip~~~~~~~l~~L~~L~L 175 (631)
+.+++++|+++ .+|..+.. +|++|+|++|+|++..|. .++ +|+.|+|++|++++..|..+. .+++|++|+|
T Consensus 11 ~~l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~--~l~~L~~L~L 85 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFE--GASHIQELQL 85 (192)
T ss_dssp TEEECTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTT--TCTTCCEEEC
T ss_pred CEEEcCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcC--CcccCCEEEC
Confidence 46777888885 78876654 899999999999865554 243 899999999999988888888 8899999999
Q ss_pred cCCcccccCCCCCCCCccCcCCCCCCCEEEeecCcCcccCChhhccCCCCCCEEEccCCCCcccCC
Q 042825 176 GNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNNLLQGPTP 241 (631)
Q Consensus 176 s~N~l~g~iP~~~~~~~~~~~~l~~L~~L~L~~N~l~g~iP~~~~~~l~~L~~L~ls~N~l~g~~p 241 (631)
++|+|++..|.. +.++++|++|+|++|+|++.+|.. +..+++|++|+|++|.+++..+
T Consensus 86 s~N~l~~~~~~~-------~~~l~~L~~L~L~~N~l~~~~~~~-~~~l~~L~~L~L~~N~l~c~c~ 143 (192)
T 1w8a_A 86 GENKIKEISNKM-------FLGLHQLKTLNLYDNQISCVMPGS-FEHLNSLTSLNLASNPFNCNCH 143 (192)
T ss_dssp CSCCCCEECSSS-------STTCTTCCEEECCSSCCCEECTTS-STTCTTCCEEECTTCCBCCSGG
T ss_pred CCCcCCccCHHH-------hcCCCCCCEEECCCCcCCeeCHHH-hhcCCCCCEEEeCCCCccCcCc
Confidence 999999665544 458899999999999999877754 8899999999999999988765
|
| >2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus} | Back alignment and structure |
|---|
Probab=99.65 E-value=1.7e-16 Score=165.00 Aligned_cols=152 Identities=20% Similarity=0.214 Sum_probs=127.4
Q ss_pred CCCeEEEEeCCCCCc--ccCcchhcCCccCceeecccCcccCCCCcCcc-cccccccccccceecCCCCCCcCCCCCCcE
Q 042825 96 DGQVTNIELQDQNRK--GTVPPILKKLSSMAVMYLENNQLRGPIPSLVG-SLEFFSAYEANISGTIPDFIGTDTFPQLSY 172 (631)
Q Consensus 96 ~~~l~~l~l~~n~l~--g~ip~~~~~l~~L~~L~L~~N~l~g~lP~~~~-~L~~L~l~~n~l~g~ip~~~~~~~l~~L~~ 172 (631)
..+++.|++++|.++ |..|..+..+ +|++|++++|++++ +|..+. +|+.|++++|++++..|..+. .+++|+.
T Consensus 146 l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~-l~~~~~~~L~~L~l~~n~i~~~~~~~l~--~l~~L~~ 221 (332)
T 2ft3_A 146 LRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTG-IPKDLPETLNELHLDHNKIQAIELEDLL--RYSKLYR 221 (332)
T ss_dssp CSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCSS-CCSSSCSSCSCCBCCSSCCCCCCTTSST--TCTTCSC
T ss_pred CccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCCCc-cCccccCCCCEEECCCCcCCccCHHHhc--CCCCCCE
Confidence 458999999999996 4677888888 99999999999995 777665 999999999999988888888 8999999
Q ss_pred EEccCCcccccCCCCCCCCccCcCCCCCCCEEEeecCcCcccCChhhccCCCCCCEEEccCCCCcccCCCCCCC------
Q 042825 173 LDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNNLLQGPTPRFNNS------ 246 (631)
Q Consensus 173 L~Ls~N~l~g~iP~~~~~~~~~~~~l~~L~~L~L~~N~l~g~iP~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~------ 246 (631)
|+|++|++++..|.. +..+++|++|+|++|+++ .+|.. +..+++|+.|++++|.+++..+.....
T Consensus 222 L~L~~N~l~~~~~~~-------~~~l~~L~~L~L~~N~l~-~lp~~-l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~ 292 (332)
T 2ft3_A 222 LGLGHNQIRMIENGS-------LSFLPTLRELHLDNNKLS-RVPAG-LPDLKLLQVVYLHTNNITKVGVNDFCPVGFGVK 292 (332)
T ss_dssp CBCCSSCCCCCCTTG-------GGGCTTCCEEECCSSCCC-BCCTT-GGGCTTCCEEECCSSCCCBCCTTSSSCSSCCSS
T ss_pred EECCCCcCCcCChhH-------hhCCCCCCEEECCCCcCe-ecChh-hhcCccCCEEECCCCCCCccChhHccccccccc
Confidence 999999999644434 458999999999999999 89976 899999999999999999877654322
Q ss_pred -CceEEeecCCCccc
Q 042825 247 -KLTVDMRTGSNCFC 260 (631)
Q Consensus 247 -~~~~~l~~~~n~~~ 260 (631)
.....+++++|.+.
T Consensus 293 ~~~l~~L~l~~N~~~ 307 (332)
T 2ft3_A 293 RAYYNGISLFNNPVP 307 (332)
T ss_dssp SCCBSEEECCSSSSC
T ss_pred cccccceEeecCccc
Confidence 12335667888764
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=99.65 E-value=3.9e-17 Score=183.74 Aligned_cols=226 Identities=16% Similarity=0.177 Sum_probs=147.3
Q ss_pred CCCCCCc--eecccceeehhhhcc----ccchhhhhhhhhhhccccccccccCCCCCCCChhhHHHHHHHHHhCCCCCCC
Q 042825 5 PWHPSNF--QLFGFPRLTFRDCMT----ATSELEREKTERVQGDRRKKRRKIPSASSNQSRPDAAVMQDLKASFVIPKRL 78 (631)
Q Consensus 5 ~~~~~~~--~~~~~~~~~~~~~~~----~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~k~~~~~~~~~ 78 (631)
..+|..+ .+.++..|.+.++.. +.....+.+|+.|++++|.+++..|.......... .+
T Consensus 64 ~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~-----~L---------- 128 (597)
T 3oja_B 64 RKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLT-----VL---------- 128 (597)
T ss_dssp SEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCC-----EE----------
T ss_pred CCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCC-----EE----------
Confidence 3456654 567788888877742 12344678999999999999987666554432210 00
Q ss_pred CCCCCCCCCcccee---eCCCCCeEEEEeCCCCCcccCcchhcCCccCceeecccCcccCCCCcCcc-------------
Q 042825 79 KWSDPDPCQWSHVI---CSDDGQVTNIELQDQNRKGTVPPILKKLSSMAVMYLENNQLRGPIPSLVG------------- 142 (631)
Q Consensus 79 ~w~~~~~C~w~gv~---C~~~~~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~L~~N~l~g~lP~~~~------------- 142 (631)
+.++ |...++. .....+++.|+|++|.+++..|..|+++++|++|+|++|.|++.-+..+.
T Consensus 129 ~L~~---n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~L~l~~n~l~ 205 (597)
T 3oja_B 129 VLER---NDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVDLSLIPSLFHANVSYNLLS 205 (597)
T ss_dssp ECCS---SCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBCCGGGCTTCSEEECCSSCCS
T ss_pred EeeC---CCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCcChhhhhhhhhhhcccCccc
Confidence 0000 1111111 01235788899999888887777888888888898888888753222222
Q ss_pred ---------------------------cccccccccccceecCCCCCCcCCCCCCcEEEccCCcccccCCCCCCCCccCc
Q 042825 143 ---------------------------SLEFFSAYEANISGTIPDFIGTDTFPQLSYLDLGNNNLQGTIPSSFGMPFADI 195 (631)
Q Consensus 143 ---------------------------~L~~L~l~~n~l~g~ip~~~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~~~~~~ 195 (631)
+|+.|++++|++++ +..++ .+++|+.|+|++|.+++.+|..+
T Consensus 206 ~l~~~~~L~~L~ls~n~l~~~~~~~~~~L~~L~L~~n~l~~--~~~l~--~l~~L~~L~Ls~N~l~~~~~~~~------- 274 (597)
T 3oja_B 206 TLAIPIAVEELDASHNSINVVRGPVNVELTILKLQHNNLTD--TAWLL--NYPGLVEVDLSYNELEKIMYHPF------- 274 (597)
T ss_dssp EEECCTTCSEEECCSSCCCEEECSCCSCCCEEECCSSCCCC--CGGGG--GCTTCSEEECCSSCCCEEESGGG-------
T ss_pred cccCCchhheeeccCCcccccccccCCCCCEEECCCCCCCC--Chhhc--cCCCCCEEECCCCccCCCCHHHh-------
Confidence 24445555555554 23444 67888888888888887767554
Q ss_pred CCCCCCCEEEeecCcCcccCChhhccCCCCCCEEEccCCCCcccCCCCCCCCceEEeecCCCcccC
Q 042825 196 SNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNNLLQGPTPRFNNSKLTVDMRTGSNCFCL 261 (631)
Q Consensus 196 ~~l~~L~~L~L~~N~l~g~iP~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~~~~~~l~~~~n~~~~ 261 (631)
+++++|+.|+|++|++++ +|.. +..+++|+.|+|++|.+++.++.+........+++++|.+.+
T Consensus 275 ~~l~~L~~L~Ls~N~l~~-l~~~-~~~l~~L~~L~Ls~N~l~~i~~~~~~l~~L~~L~L~~N~l~~ 338 (597)
T 3oja_B 275 VKMQRLERLYISNNRLVA-LNLY-GQPIPTLKVLDLSHNHLLHVERNQPQFDRLENLYLDHNSIVT 338 (597)
T ss_dssp TTCSSCCEEECTTSCCCE-EECS-SSCCTTCCEEECCSSCCCCCGGGHHHHTTCSEEECCSSCCCC
T ss_pred cCccCCCEEECCCCCCCC-CCcc-cccCCCCcEEECCCCCCCccCcccccCCCCCEEECCCCCCCC
Confidence 478888888888888885 5644 667888888888888888544443333344456678888765
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=99.65 E-value=8.1e-16 Score=163.49 Aligned_cols=228 Identities=14% Similarity=0.096 Sum_probs=108.9
Q ss_pred CCCceecccceeehhhhcc-ccc---hhhhhhhhhhhccccccccccCCCCCCCChhhHHHHHHHHHhCCCCCCCCCCCC
Q 042825 8 PSNFQLFGFPRLTFRDCMT-ATS---ELEREKTERVQGDRRKKRRKIPSASSNQSRPDAAVMQDLKASFVIPKRLKWSDP 83 (631)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~-~~~---~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~k~~~~~~~~~~w~~~ 83 (631)
++++.+-++..+.+.++.. ..+ .....+|+.|++.+|.+++..+......... ..+. +++
T Consensus 39 ~~~~~l~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L-----~~L~--------L~~--- 102 (390)
T 3o6n_A 39 FEDITLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTI-----QKLY--------MGF--- 102 (390)
T ss_dssp CSSGGGCCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTC-----CEEE--------CCS---
T ss_pred ccccccCCceEEEecCCchhhCChhHhcccccCcEEECCCCcccccChhhccCCCCc-----CEEE--------CCC---
Confidence 4455666667776666532 111 2245788888888888875444443322110 0000 000
Q ss_pred CCCCccceee---CCCCCeEEEEeCCCCCcccCcch-hcCCccCceeecccCcccCCCCcCcc---ccccccccccccee
Q 042825 84 DPCQWSHVIC---SDDGQVTNIELQDQNRKGTVPPI-LKKLSSMAVMYLENNQLRGPIPSLVG---SLEFFSAYEANISG 156 (631)
Q Consensus 84 ~~C~w~gv~C---~~~~~l~~l~l~~n~l~g~ip~~-~~~l~~L~~L~L~~N~l~g~lP~~~~---~L~~L~l~~n~l~g 156 (631)
|...++.- ....+++.|+|++|.++ .+|+. +.++++|++|+|++|.+++..|..+. +|+.|++++|++++
T Consensus 103 --n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 179 (390)
T 3o6n_A 103 --NAIRYLPPHVFQNVPLLTVLVLERNDLS-SLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTH 179 (390)
T ss_dssp --SCCCCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSB
T ss_pred --CCCCcCCHHHhcCCCCCCEEECCCCccC-cCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCc
Confidence 00000000 12235666666666666 34443 46666666666666666654444443 56666666666654
Q ss_pred cCCCCCCcCCCCCCcEEEccCCcccc------------------cCCCCCC-------------CCccCcCCCCCCCEEE
Q 042825 157 TIPDFIGTDTFPQLSYLDLGNNNLQG------------------TIPSSFG-------------MPFADISNLSTLEDLS 205 (631)
Q Consensus 157 ~ip~~~~~~~l~~L~~L~Ls~N~l~g------------------~iP~~~~-------------~~~~~~~~l~~L~~L~ 205 (631)
. + ++ .+++|+.|++++|.+++ .+|.... ..++.+.++++|++|+
T Consensus 180 ~-~--~~--~l~~L~~L~l~~n~l~~~~~~~~L~~L~l~~n~l~~~~~~~~~~L~~L~l~~n~l~~~~~l~~l~~L~~L~ 254 (390)
T 3o6n_A 180 V-D--LS--LIPSLFHANVSYNLLSTLAIPIAVEELDASHNSINVVRGPVNVELTILKLQHNNLTDTAWLLNYPGLVEVD 254 (390)
T ss_dssp C-C--GG--GCTTCSEEECCSSCCSEEECCSSCSEEECCSSCCCEEECCCCSSCCEEECCSSCCCCCGGGGGCTTCSEEE
T ss_pred c-c--cc--cccccceeecccccccccCCCCcceEEECCCCeeeeccccccccccEEECCCCCCcccHHHcCCCCccEEE
Confidence 2 1 11 23333333333333331 1111100 0112244555566666
Q ss_pred eecCcCcccCChhhccCCCCCCEEEccCCCCcccCCCCCCCCceEEeecCCCccc
Q 042825 206 LGHNKLTGIFPVSSFNNHPKLTTLNLTNNLLQGPTPRFNNSKLTVDMRTGSNCFC 260 (631)
Q Consensus 206 L~~N~l~g~iP~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~~~~~~l~~~~n~~~ 260 (631)
|++|++++..|.. +..+++|+.|+|++|++++..+..........+++++|.+.
T Consensus 255 Ls~n~l~~~~~~~-~~~l~~L~~L~L~~n~l~~~~~~~~~l~~L~~L~L~~n~l~ 308 (390)
T 3o6n_A 255 LSYNELEKIMYHP-FVKMQRLERLYISNNRLVALNLYGQPIPTLKVLDLSHNHLL 308 (390)
T ss_dssp CCSSCCCEEESGG-GTTCSSCCEEECCSSCCCEEECSSSCCTTCCEEECCSSCCC
T ss_pred CCCCcCCCcChhH-ccccccCCEEECCCCcCcccCcccCCCCCCCEEECCCCcce
Confidence 6666665444433 55556666666666665554333322233334455555554
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.65 E-value=1.7e-16 Score=175.36 Aligned_cols=151 Identities=16% Similarity=0.175 Sum_probs=97.8
Q ss_pred CeEEEEeCCCCCcccCcchh-----cCCccCceeecccCcccCCCC-----------------------------cCccc
Q 042825 98 QVTNIELQDQNRKGTVPPIL-----KKLSSMAVMYLENNQLRGPIP-----------------------------SLVGS 143 (631)
Q Consensus 98 ~l~~l~l~~n~l~g~ip~~~-----~~l~~L~~L~L~~N~l~g~lP-----------------------------~~~~~ 143 (631)
+++.|++++|.++|.+|..+ +++++|+.+++++|.+ .+| ..+.+
T Consensus 248 ~L~~L~l~~n~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~~--~~p~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~l~~ 325 (520)
T 2z7x_B 248 TVWYFSISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVF--GFPQSYIYEIFSNMNIKNFTVSGTRMVHMLCPSKISP 325 (520)
T ss_dssp SCSEEEEEEEEEESCCCCCCCCCCSCCCCEEEEEEEEECCC--CSCTHHHHHHHHTCCCSEEEEESSCCCCCCCCSSCCC
T ss_pred cccEEEeecccccCccccchhhcccccCceeEeccccccce--ecchhhhhcccccCceeEEEcCCCccccccchhhCCc
Confidence 68888888888888888887 7777777777777776 444 33346
Q ss_pred ccccccccccceecCCCCCCcCCCCCCcEEEccCCcccc--cCCCCCCCCccCcCCCCCCCEEEeecCcCcccCChhhcc
Q 042825 144 LEFFSAYEANISGTIPDFIGTDTFPQLSYLDLGNNNLQG--TIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFN 221 (631)
Q Consensus 144 L~~L~l~~n~l~g~ip~~~~~~~l~~L~~L~Ls~N~l~g--~iP~~~~~~~~~~~~l~~L~~L~L~~N~l~g~iP~~~~~ 221 (631)
|+.|++++|++++.+|..++ .+++|++|+|++|++++ .+|.. ++++++|++|+|++|++++.+|...+.
T Consensus 326 L~~L~Ls~n~l~~~~~~~~~--~l~~L~~L~L~~N~l~~l~~~~~~-------~~~l~~L~~L~Ls~N~l~~~l~~~~~~ 396 (520)
T 2z7x_B 326 FLHLDFSNNLLTDTVFENCG--HLTELETLILQMNQLKELSKIAEM-------TTQMKSLQQLDISQNSVSYDEKKGDCS 396 (520)
T ss_dssp CCEEECCSSCCCTTTTTTCC--CCSSCCEEECCSSCCCBHHHHHHH-------HTTCTTCCEEECCSSCCBCCGGGCSCC
T ss_pred ccEEEeECCccChhhhhhhc--cCCCCCEEEccCCccCccccchHH-------HhhCCCCCEEECCCCcCCcccccchhc
Confidence 66666666666666666665 56666666666666664 33332 346667777777777776556655466
Q ss_pred CCCCCCEEEccCCCCcccCCCCCCCCceEEeecCCCccc
Q 042825 222 NHPKLTTLNLTNNLLQGPTPRFNNSKLTVDMRTGSNCFC 260 (631)
Q Consensus 222 ~l~~L~~L~ls~N~l~g~~p~~~~~~~~~~l~~~~n~~~ 260 (631)
.+++|+.|++++|.+++.+|.... .....+++++|.+.
T Consensus 397 ~l~~L~~L~Ls~N~l~~~~~~~l~-~~L~~L~Ls~N~l~ 434 (520)
T 2z7x_B 397 WTKSLLSLNMSSNILTDTIFRCLP-PRIKVLDLHSNKIK 434 (520)
T ss_dssp CCTTCCEEECCSSCCCGGGGGSCC-TTCCEEECCSSCCC
T ss_pred cCccCCEEECcCCCCCcchhhhhc-ccCCEEECCCCccc
Confidence 666777777777777666554332 12334455666665
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* | Back alignment and structure |
|---|
Probab=99.65 E-value=4e-16 Score=175.61 Aligned_cols=155 Identities=18% Similarity=0.137 Sum_probs=132.8
Q ss_pred CCeEEEEeCCCCCcccCcchhcCCccCceeecccCcccCCCCcCcc---cccccccccccceecCCCCCCcCCCCCCcEE
Q 042825 97 GQVTNIELQDQNRKGTVPPILKKLSSMAVMYLENNQLRGPIPSLVG---SLEFFSAYEANISGTIPDFIGTDTFPQLSYL 173 (631)
Q Consensus 97 ~~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~L~~N~l~g~lP~~~~---~L~~L~l~~n~l~g~ip~~~~~~~l~~L~~L 173 (631)
.+++.|+|++|.+++..+..|.++++|++|+|++|++++..|..++ +|++|++++|++++..|..++ .+++|++|
T Consensus 32 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~--~l~~L~~L 109 (606)
T 3vq2_A 32 SSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFS--GLTSLENL 109 (606)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSST--TCTTCCEE
T ss_pred CCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcC--CcccCCEE
Confidence 4799999999999988888999999999999999999987777665 899999999999988899998 89999999
Q ss_pred EccCCcccccCCCCCCCCccCcCCCCCCCEEEeecCcCcc-cCChhhccCCCCCCEEEccCCCCcccCCCCCCCCc----
Q 042825 174 DLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTG-IFPVSSFNNHPKLTTLNLTNNLLQGPTPRFNNSKL---- 248 (631)
Q Consensus 174 ~Ls~N~l~g~iP~~~~~~~~~~~~l~~L~~L~L~~N~l~g-~iP~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~~~---- 248 (631)
+|++|++++..|.. ++++++|++|+|++|++++ .+|.. ++.+++|++|++++|.+++..|.......
T Consensus 110 ~L~~n~l~~~~~~~-------~~~l~~L~~L~L~~n~l~~~~lp~~-~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~ 181 (606)
T 3vq2_A 110 VAVETKLASLESFP-------IGQLITLKKLNVAHNFIHSCKLPAY-FSNLTNLVHVDLSYNYIQTITVNDLQFLRENPQ 181 (606)
T ss_dssp ECTTSCCCCSSSSC-------CTTCTTCCEEECCSSCCCCCCCCGG-GGTCTTCCEEECCSSCCCEECTTTTHHHHHCTT
T ss_pred EccCCccccccccc-------cCCCCCCCEEeCCCCcccceechHh-HhhcCCCCEEEccCCcceecChhhhhhhhcccc
Confidence 99999999544444 4699999999999999986 67865 99999999999999999998876433211
Q ss_pred -eEEeecCCCcccC
Q 042825 249 -TVDMRTGSNCFCL 261 (631)
Q Consensus 249 -~~~l~~~~n~~~~ 261 (631)
...+++++|.+.+
T Consensus 182 ~l~~L~l~~n~l~~ 195 (606)
T 3vq2_A 182 VNLSLDMSLNPIDF 195 (606)
T ss_dssp CCCEEECTTCCCCE
T ss_pred ccceeeccCCCcce
Confidence 2356678888875
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.65 E-value=4.2e-16 Score=173.97 Aligned_cols=20 Identities=5% Similarity=0.008 Sum_probs=11.1
Q ss_pred CeEEEEeCCCCCcccCcchh
Q 042825 98 QVTNIELQDQNRKGTVPPIL 117 (631)
Q Consensus 98 ~l~~l~l~~n~l~g~ip~~~ 117 (631)
+++.|++++|.++|.+|..+
T Consensus 277 ~L~~L~l~~n~l~~~ip~~~ 296 (562)
T 3a79_B 277 PVEYLNIYNLTITERIDREE 296 (562)
T ss_dssp SEEEEEEEEEEECSCCCCCC
T ss_pred cccEEEEeccEeeccccchh
Confidence 45555555555555555544
|
| >4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.64 E-value=1.5e-16 Score=163.80 Aligned_cols=205 Identities=16% Similarity=0.194 Sum_probs=138.8
Q ss_pred hhhhhhhhccccccccccCCCC--CCCChhhHHHHHHHHHhCCCCCCCCCCCCCCCCcc-ceeeCCCCCeEEEEeCCCCC
Q 042825 33 REKTERVQGDRRKKRRKIPSAS--SNQSRPDAAVMQDLKASFVIPKRLKWSDPDPCQWS-HVICSDDGQVTNIELQDQNR 109 (631)
Q Consensus 33 ~~~l~~l~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~k~~~~~~~~~~w~~~~~C~w~-gv~C~~~~~l~~l~l~~n~l 109 (631)
..+|++|++.+|.+++.+|... ..... |..+..... ...+ ...|- ...-....+++.|+|++|.+
T Consensus 90 ~~~L~~L~l~~n~l~~~~~~~~~~~~~~~-----L~~L~Ls~n-----~i~~--~~~~~~~~~~~~~~~L~~L~Ls~n~l 157 (310)
T 4glp_A 90 YSRLKELTLEDLKITGTMPPLPLEATGLA-----LSSLRLRNV-----SWAT--GRSWLAELQQWLKPGLKVLSIAQAHS 157 (310)
T ss_dssp HSCCCEEEEESCCCBSCCCCCSSSCCCBC-----CSSCEEESC-----CCSS--TTSSHHHHHTTBCSCCCEEEEECCSS
T ss_pred cCceeEEEeeCCEeccchhhhhhhccCCC-----CCEEEeecc-----cccc--hhhhhHHHHhhhccCCCEEEeeCCCc
Confidence 4669999999999998888765 22211 000000000 0000 00100 00001235789999999999
Q ss_pred cccCcchhcCCccCceeecccCcccCC--CC-----cCcccccccccccccceecCCC---C-CCcCCCCCCcEEEccCC
Q 042825 110 KGTVPPILKKLSSMAVMYLENNQLRGP--IP-----SLVGSLEFFSAYEANISGTIPD---F-IGTDTFPQLSYLDLGNN 178 (631)
Q Consensus 110 ~g~ip~~~~~l~~L~~L~L~~N~l~g~--lP-----~~~~~L~~L~l~~n~l~g~ip~---~-~~~~~l~~L~~L~Ls~N 178 (631)
.+..|..++++++|++|+|++|++.+. ++ ..+.+|++|++++|+++. +|. . ++ .+++|++|||++|
T Consensus 158 ~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~--~l~~L~~L~Ls~N 234 (310)
T 4glp_A 158 PAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMET-PTGVCAALAA--AGVQPHSLDLSHN 234 (310)
T ss_dssp CCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCC-HHHHHHHHHH--HTCCCSSEECTTS
T ss_pred chhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCc-hHHHHHHHHh--cCCCCCEEECCCC
Confidence 888888899999999999999998652 22 234589999999999972 332 2 24 6789999999999
Q ss_pred cccccCCCCCCCCccCcCCCCCCCEEEeecCcCcccCChhhccCCCCCCEEEccCCCCcccCCCCCCCCceEEeecCCCc
Q 042825 179 NLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNNLLQGPTPRFNNSKLTVDMRTGSNC 258 (631)
Q Consensus 179 ~l~g~iP~~~~~~~~~~~~l~~L~~L~L~~N~l~g~iP~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~~~~~~l~~~~n~ 258 (631)
++++.+|..++ .+..+++|++|+|++|+|+ .+|.. +. ++|+.|+|++|+|++. |..........+++++|+
T Consensus 235 ~l~~~~p~~~~----~~~~~~~L~~L~Ls~N~l~-~lp~~-~~--~~L~~L~Ls~N~l~~~-~~~~~l~~L~~L~L~~N~ 305 (310)
T 4glp_A 235 SLRATVNPSAP----RCMWSSALNSLNLSFAGLE-QVPKG-LP--AKLRVLDLSSNRLNRA-PQPDELPEVDNLTLDGNP 305 (310)
T ss_dssp CCCCCCCSCCS----SCCCCTTCCCEECCSSCCC-SCCSC-CC--SCCSCEECCSCCCCSC-CCTTSCCCCSCEECSSTT
T ss_pred CCCccchhhHH----hccCcCcCCEEECCCCCCC-chhhh-hc--CCCCEEECCCCcCCCC-chhhhCCCccEEECcCCC
Confidence 99977787654 1223379999999999999 78865 32 7899999999999984 223333344456778998
Q ss_pred ccC
Q 042825 259 FCL 261 (631)
Q Consensus 259 ~~~ 261 (631)
++.
T Consensus 306 l~~ 308 (310)
T 4glp_A 306 FLV 308 (310)
T ss_dssp TSC
T ss_pred CCC
Confidence 764
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.64 E-value=3.3e-16 Score=164.25 Aligned_cols=134 Identities=16% Similarity=0.208 Sum_probs=92.5
Q ss_pred CCeEEEEeCCCCCcccCcchhcCCccCceeecccCcccCCCCc--Ccc---ccccccccccc-ceecCCCCCCcCCCCCC
Q 042825 97 GQVTNIELQDQNRKGTVPPILKKLSSMAVMYLENNQLRGPIPS--LVG---SLEFFSAYEAN-ISGTIPDFIGTDTFPQL 170 (631)
Q Consensus 97 ~~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~L~~N~l~g~lP~--~~~---~L~~L~l~~n~-l~g~ip~~~~~~~l~~L 170 (631)
.+++.|+|++|.+++..+..+.++++|++|+|++|+++ .+|. .+. +|+.|++++|+ +++..|..+. .+++|
T Consensus 100 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~--~l~~L 176 (353)
T 2z80_A 100 GSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYK-TLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFA--GLTFL 176 (353)
T ss_dssp TTCCEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCS-SSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTT--TCCEE
T ss_pred CCCCEEECCCCcCCcCCHhHhCCCccCCEEECCCCCCc-ccCchhhhccCCCCcEEECCCCccccccCHHHcc--CCCCC
Confidence 46778888888887533334778888888888888887 4554 333 77888888874 5555556666 67788
Q ss_pred cEEEccCCcccccCCCCCCCCccCcCCCCCCCEEEeecCcCcccCChhhccCCCCCCEEEccCCCCcccCC
Q 042825 171 SYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNNLLQGPTP 241 (631)
Q Consensus 171 ~~L~Ls~N~l~g~iP~~~~~~~~~~~~l~~L~~L~L~~N~l~g~iP~~~~~~l~~L~~L~ls~N~l~g~~p 241 (631)
++|+|++|++++..|..+ .++++|++|+|++|+++ .+|...+..+++|+.|++++|.+++..+
T Consensus 177 ~~L~l~~n~l~~~~~~~l-------~~l~~L~~L~l~~n~l~-~~~~~~~~~~~~L~~L~L~~n~l~~~~~ 239 (353)
T 2z80_A 177 EELEIDASDLQSYEPKSL-------KSIQNVSHLILHMKQHI-LLLEIFVDVTSSVECLELRDTDLDTFHF 239 (353)
T ss_dssp EEEEEEETTCCEECTTTT-------TTCSEEEEEEEECSCST-THHHHHHHHTTTEEEEEEESCBCTTCCC
T ss_pred CEEECCCCCcCccCHHHH-------hccccCCeecCCCCccc-cchhhhhhhcccccEEECCCCccccccc
Confidence 888888888886666554 36777777777777775 5555545556777777777777776543
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.64 E-value=2.6e-16 Score=164.99 Aligned_cols=168 Identities=17% Similarity=0.234 Sum_probs=135.0
Q ss_pred CCCCCCccceeeCC------------CCCeEEEEeCCCCCcccCcchhcCCccCceeecccCcccCCCCcCcc---cccc
Q 042825 82 DPDPCQWSHVICSD------------DGQVTNIELQDQNRKGTVPPILKKLSSMAVMYLENNQLRGPIPSLVG---SLEF 146 (631)
Q Consensus 82 ~~~~C~w~gv~C~~------------~~~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~L~~N~l~g~lP~~~~---~L~~ 146 (631)
....|.|.|+ |+. ..+++.|+|++|++++..+..+.++++|++|+|++|++++..|..+. +|++
T Consensus 26 ~~~~C~~~~~-c~~~~~~l~~iP~~~~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 104 (353)
T 2z80_A 26 ASLSCDRNGI-CKGSSGSLNSIPSGLTEAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEH 104 (353)
T ss_dssp -CCEECTTSE-EECCSTTCSSCCTTCCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCE
T ss_pred cCCCCCCCeE-eeCCCCCcccccccccccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCE
Confidence 3567999987 642 13799999999999976666899999999999999999977676665 8999
Q ss_pred cccccccceecCCCCCCcCCCCCCcEEEccCCcccccCCC-CCCCCccCcCCCCCCCEEEeecCc-CcccCChhhccCCC
Q 042825 147 FSAYEANISGTIPDFIGTDTFPQLSYLDLGNNNLQGTIPS-SFGMPFADISNLSTLEDLSLGHNK-LTGIFPVSSFNNHP 224 (631)
Q Consensus 147 L~l~~n~l~g~ip~~~~~~~l~~L~~L~Ls~N~l~g~iP~-~~~~~~~~~~~l~~L~~L~L~~N~-l~g~iP~~~~~~l~ 224 (631)
|++++|++++..+..++ .+++|++|+|++|+++ .+|. .. +.++++|++|+|++|+ ++ .++...+..++
T Consensus 105 L~Ls~n~l~~~~~~~~~--~l~~L~~L~L~~n~l~-~l~~~~~------~~~l~~L~~L~l~~n~~~~-~~~~~~~~~l~ 174 (353)
T 2z80_A 105 LDLSYNYLSNLSSSWFK--PLSSLTFLNLLGNPYK-TLGETSL------FSHLTKLQILRVGNMDTFT-KIQRKDFAGLT 174 (353)
T ss_dssp EECCSSCCSSCCHHHHT--TCTTCSEEECTTCCCS-SSCSSCS------CTTCTTCCEEEEEESSSCC-EECTTTTTTCC
T ss_pred EECCCCcCCcCCHhHhC--CCccCCEEECCCCCCc-ccCchhh------hccCCCCcEEECCCCcccc-ccCHHHccCCC
Confidence 99999999954333366 7899999999999999 7775 21 5689999999999995 55 55545589999
Q ss_pred CCCEEEccCCCCcccCCCCCC-CCceEEeecCCCccc
Q 042825 225 KLTTLNLTNNLLQGPTPRFNN-SKLTVDMRTGSNCFC 260 (631)
Q Consensus 225 ~L~~L~ls~N~l~g~~p~~~~-~~~~~~l~~~~n~~~ 260 (631)
+|+.|++++|.+++..|.... ......+++++|.+.
T Consensus 175 ~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~ 211 (353)
T 2z80_A 175 FLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHI 211 (353)
T ss_dssp EEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCST
T ss_pred CCCEEECCCCCcCccCHHHHhccccCCeecCCCCccc
Confidence 999999999999998776544 345566777888764
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.64 E-value=1.1e-15 Score=167.07 Aligned_cols=134 Identities=21% Similarity=0.278 Sum_probs=82.4
Q ss_pred CeEEEEeCCCCCcccCcchhcCCccCceeecccCcccCCCCcCc---ccccccccccccceecCCCCCCcCCCCCCcEEE
Q 042825 98 QVTNIELQDQNRKGTVPPILKKLSSMAVMYLENNQLRGPIPSLV---GSLEFFSAYEANISGTIPDFIGTDTFPQLSYLD 174 (631)
Q Consensus 98 ~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~L~~N~l~g~lP~~~---~~L~~L~l~~n~l~g~ip~~~~~~~l~~L~~L~ 174 (631)
+++.|+|++|.+++..|..|.++++|++|+|++|++++..+..+ .+|+.|++++|++++..|..+. .+++|+.|+
T Consensus 57 ~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~--~l~~L~~L~ 134 (477)
T 2id5_A 57 HLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQ--DLYNLKSLE 134 (477)
T ss_dssp TCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTT--TCTTCCEEE
T ss_pred CCCEEECCCCccCEeChhhhhCCccCCEEECCCCcCCccCcccccCCCCCCEEECCCCccccCChhHcc--ccccCCEEE
Confidence 56666777666666666666666677777777666663322223 2666666776766666666665 666677777
Q ss_pred ccCCcccccCCCCCCCCccCcCCCCCCCEEEeecCcCcccCChhhccCCCCCCEEEccCCCCcccCC
Q 042825 175 LGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNNLLQGPTP 241 (631)
Q Consensus 175 Ls~N~l~g~iP~~~~~~~~~~~~l~~L~~L~L~~N~l~g~iP~~~~~~l~~L~~L~ls~N~l~g~~p 241 (631)
|++|.+++..|..+ .++++|++|+|++|+++ .+|...+..+++|+.|+|++|.+++..+
T Consensus 135 l~~n~l~~~~~~~~-------~~l~~L~~L~l~~n~l~-~~~~~~l~~l~~L~~L~l~~n~i~~~~~ 193 (477)
T 2id5_A 135 VGDNDLVYISHRAF-------SGLNSLEQLTLEKCNLT-SIPTEALSHLHGLIVLRLRHLNINAIRD 193 (477)
T ss_dssp ECCTTCCEECTTSS-------TTCTTCCEEEEESCCCS-SCCHHHHTTCTTCCEEEEESCCCCEECT
T ss_pred CCCCccceeChhhc-------cCCCCCCEEECCCCcCc-ccChhHhcccCCCcEEeCCCCcCcEeCh
Confidence 77666664444333 35666666666666666 3444446666666666666666665544
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.64 E-value=5.3e-16 Score=181.44 Aligned_cols=149 Identities=16% Similarity=0.148 Sum_probs=126.7
Q ss_pred CCccceeeCCCCCeEEEEeCCCCCcccCcchhcCCccCceeecccCcccCCC-CcCcc---cccccccccccceecCCCC
Q 042825 86 CQWSHVICSDDGQVTNIELQDQNRKGTVPPILKKLSSMAVMYLENNQLRGPI-PSLVG---SLEFFSAYEANISGTIPDF 161 (631)
Q Consensus 86 C~w~gv~C~~~~~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~L~~N~l~g~l-P~~~~---~L~~L~l~~n~l~g~ip~~ 161 (631)
|.|..|.+ -..+++.|+|++|.+++..|..|.++++|++|+|++|.+.+.+ |..+. +|++|+|++|++++..|..
T Consensus 14 ~~L~~vP~-lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~ 92 (844)
T 3j0a_A 14 CNLTQVPQ-VLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDA 92 (844)
T ss_dssp CCSSCCCS-SCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTS
T ss_pred CCCCCCCC-CCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhH
Confidence 45666666 5578999999999999888999999999999999999887777 55555 8999999999999999999
Q ss_pred CCcCCCCCCcEEEccCCcccccCCCCCCCCccCcCCCCCCCEEEeecCcCcccCChhhccCCCCCCEEEccCCCCcccCC
Q 042825 162 IGTDTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNNLLQGPTP 241 (631)
Q Consensus 162 ~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~~~~~~~~l~~L~~L~L~~N~l~g~iP~~~~~~l~~L~~L~ls~N~l~g~~p 241 (631)
++ .+++|++|+|++|.+++.+|... .++++++|++|+|++|++++..|...|+.+++|++|+|++|.+++..|
T Consensus 93 ~~--~l~~L~~L~Ls~n~l~~~~~~~~-----~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~ 165 (844)
T 3j0a_A 93 FQ--GLFHLFELRLYFCGLSDAVLKDG-----YFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCE 165 (844)
T ss_dssp SC--SCSSCCCEECTTCCCSSCCSTTC-----CCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCS
T ss_pred cc--CCcccCEeeCcCCCCCcccccCc-----cccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCH
Confidence 98 89999999999999998777541 156899999999999999876664458899999999999999988766
Q ss_pred C
Q 042825 242 R 242 (631)
Q Consensus 242 ~ 242 (631)
.
T Consensus 166 ~ 166 (844)
T 3j0a_A 166 H 166 (844)
T ss_dssp G
T ss_pred H
Confidence 5
|
| >3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A} | Back alignment and structure |
|---|
Probab=99.63 E-value=6.1e-16 Score=171.50 Aligned_cols=156 Identities=27% Similarity=0.409 Sum_probs=122.0
Q ss_pred CC-CCCCCC-----Cccce-eeCCCCCeEEEEeCCCCCcccCcchhcCCccCceeecccCcccCCCCcCccccccccccc
Q 042825 79 KW-SDPDPC-----QWSHV-ICSDDGQVTNIELQDQNRKGTVPPILKKLSSMAVMYLENNQLRGPIPSLVGSLEFFSAYE 151 (631)
Q Consensus 79 ~w-~~~~~C-----~w~gv-~C~~~~~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~L~~N~l~g~lP~~~~~L~~L~l~~ 151 (631)
+| .+.++| .|.|+ .|. .++++.|+|++|++++ +|..+. ++|++|+|++|+|+ .+|..+.+|+.|++++
T Consensus 35 ~W~~~~~~~~~~~~~~~~l~~C~-~~~L~~L~Ls~n~L~~-lp~~l~--~~L~~L~Ls~N~l~-~ip~~l~~L~~L~Ls~ 109 (571)
T 3cvr_A 35 KWEKQALPGENRNEAVSLLKECL-INQFSELQLNRLNLSS-LPDNLP--PQITVLEITQNALI-SLPELPASLEYLDACD 109 (571)
T ss_dssp HHHTTCCTTCCHHHHHHHHHHHH-HTTCSEEECCSSCCSC-CCSCCC--TTCSEEECCSSCCS-CCCCCCTTCCEEECCS
T ss_pred HHhccCCccccccchhhhccccc-cCCccEEEeCCCCCCc-cCHhHc--CCCCEEECcCCCCc-ccccccCCCCEEEccC
Confidence 46 455788 69999 784 3589999999999997 888764 78999999999999 7886566999999999
Q ss_pred ccceecCCCCCCcCCCCCCcEEEccCCcccccCCCCCCCCccCcCCCCCCCEEEeecCcCcccCChhhccCCCCCCEEEc
Q 042825 152 ANISGTIPDFIGTDTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNL 231 (631)
Q Consensus 152 n~l~g~ip~~~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~~~~~~~~l~~L~~L~L~~N~l~g~iP~~~~~~l~~L~~L~l 231 (631)
|++++ +|. +. . +|++|+|++|+|++ +|. .+++|+.|+|++|+|++ +|. .+++|+.|+|
T Consensus 110 N~l~~-ip~-l~--~--~L~~L~Ls~N~l~~-lp~----------~l~~L~~L~Ls~N~l~~-lp~----~l~~L~~L~L 167 (571)
T 3cvr_A 110 NRLST-LPE-LP--A--SLKHLDVDNNQLTM-LPE----------LPALLEYINADNNQLTM-LPE----LPTSLEVLSV 167 (571)
T ss_dssp SCCSC-CCC-CC--T--TCCEEECCSSCCSC-CCC----------CCTTCCEEECCSSCCSC-CCC----CCTTCCEEEC
T ss_pred CCCCC-cch-hh--c--CCCEEECCCCcCCC-CCC----------cCccccEEeCCCCccCc-CCC----cCCCcCEEEC
Confidence 99997 888 66 3 89999999999995 775 35778888888888884 774 4677888888
Q ss_pred cCCCCcccCCCCCCCCceEEeecCCCcccCCCCC
Q 042825 232 TNNLLQGPTPRFNNSKLTVDMRTGSNCFCLDDPG 265 (631)
Q Consensus 232 s~N~l~g~~p~~~~~~~~~~l~~~~n~~~~~~~~ 265 (631)
++|+|++ +|.+. .....+++++|.++. +|.
T Consensus 168 s~N~L~~-lp~l~--~~L~~L~Ls~N~L~~-lp~ 197 (571)
T 3cvr_A 168 RNNQLTF-LPELP--ESLEALDVSTNLLES-LPA 197 (571)
T ss_dssp CSSCCSC-CCCCC--TTCCEEECCSSCCSS-CCC
T ss_pred CCCCCCC-cchhh--CCCCEEECcCCCCCc-hhh
Confidence 8888887 45433 344456668887773 554
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* | Back alignment and structure |
|---|
Probab=99.63 E-value=2.4e-15 Score=171.60 Aligned_cols=232 Identities=19% Similarity=0.158 Sum_probs=164.7
Q ss_pred Cc-eecccceeehhhhcc---ccc---h--hhhhhhhhhhccccccccccCCCCCCCChhhHHHHHHHHHhCCCCCCCCC
Q 042825 10 NF-QLFGFPRLTFRDCMT---ATS---E--LEREKTERVQGDRRKKRRKIPSASSNQSRPDAAVMQDLKASFVIPKRLKW 80 (631)
Q Consensus 10 ~~-~~~~~~~~~~~~~~~---~~~---~--~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~k~~~~~~~~~~w 80 (631)
-| ++.++..+.+.++.. ..+ . ....+|+.|++++|++++..|.+...+...+. + +-
T Consensus 348 ~~~~l~~L~~L~Ls~n~~~~~~l~~~~f~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~-----L----------~L 412 (680)
T 1ziw_A 348 MFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLGHLEV-----L----------DL 412 (680)
T ss_dssp TTTTCTTCCEEECTTCBSCCCEECTTTTGGGTTSCCCEEECTTSCCCEECTTTTTTCTTCCE-----E----------EC
T ss_pred HhccccCCcEEECCCCchhhhhcchhhhcccccCcCceEECCCCCCCeEChhhhhCCCCCCE-----E----------eC
Confidence 35 667788888776632 111 1 11258999999999999877766554322100 0 00
Q ss_pred CCCCCCCccc----eeeCCCCCeEEEEeCCCCCcccCcchhcCCccCceeecccCccc--CCCCcCcc---ccccccccc
Q 042825 81 SDPDPCQWSH----VICSDDGQVTNIELQDQNRKGTVPPILKKLSSMAVMYLENNQLR--GPIPSLVG---SLEFFSAYE 151 (631)
Q Consensus 81 ~~~~~C~w~g----v~C~~~~~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~L~~N~l~--g~lP~~~~---~L~~L~l~~ 151 (631)
+ .|...+ .......+++.|+|++|.+.+..+..+..+++|+.|++++|.++ +.+|..+. +|+.|++++
T Consensus 413 ~---~N~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~p~~~~~l~~L~~L~Ls~ 489 (680)
T 1ziw_A 413 G---LNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSN 489 (680)
T ss_dssp C---SSCCEEECCSGGGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEECTTSCCBCTTCSSCTTTTCTTCCEEECCS
T ss_pred C---CCcCccccCcccccCcccccEEecCCCCcceeChhhhhcCcccccchhccccccccccCCcccccCCCCCEEECCC
Confidence 0 011111 11123357889999999998888888999999999999999887 56777665 789999999
Q ss_pred ccceecCCCCCCcCCCCCCcEEEccCCcccccCCCCCCC-CccCcCCCCCCCEEEeecCcCcccCChhhccCCCCCCEEE
Q 042825 152 ANISGTIPDFIGTDTFPQLSYLDLGNNNLQGTIPSSFGM-PFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLN 230 (631)
Q Consensus 152 n~l~g~ip~~~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~-~~~~~~~l~~L~~L~L~~N~l~g~iP~~~~~~l~~L~~L~ 230 (631)
|++++..|..+. .+++|++|+|++|++++..+..+.. .+..+.++++|++|+|++|+++ .+|...|..+++|+.|+
T Consensus 490 N~l~~i~~~~~~--~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~-~i~~~~~~~l~~L~~L~ 566 (680)
T 1ziw_A 490 NNIANINDDMLE--GLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFD-EIPVEVFKDLFELKIID 566 (680)
T ss_dssp SCCCCCCTTTTT--TCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEE
T ss_pred CCCCcCChhhhc--cccccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECCCCCCC-CCCHHHcccccCcceeE
Confidence 999976667777 7899999999999998532222211 1123678999999999999999 78876689999999999
Q ss_pred ccCCCCcccCCCCC-CCCceEEeecCCCcccCC
Q 042825 231 LTNNLLQGPTPRFN-NSKLTVDMRTGSNCFCLD 262 (631)
Q Consensus 231 ls~N~l~g~~p~~~-~~~~~~~l~~~~n~~~~~ 262 (631)
|++|+|++.++..+ .......+++++|.+++.
T Consensus 567 Ls~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~ 599 (680)
T 1ziw_A 567 LGLNNLNTLPASVFNNQVSLKSLNLQKNLITSV 599 (680)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECTTSCCCBC
T ss_pred CCCCCCCcCCHhHhCCCCCCCEEECCCCcCCcc
Confidence 99999998777643 334555677899988874
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=99.63 E-value=1.2e-16 Score=169.95 Aligned_cols=227 Identities=16% Similarity=0.172 Sum_probs=145.7
Q ss_pred cCCCCCCc--eecccceeehhhhcc-c---cchhhhhhhhhhhccccccccccCCCCCCCChhhHHHHHHHHHhCCCCCC
Q 042825 4 IPWHPSNF--QLFGFPRLTFRDCMT-A---TSELEREKTERVQGDRRKKRRKIPSASSNQSRPDAAVMQDLKASFVIPKR 77 (631)
Q Consensus 4 ~~~~~~~~--~~~~~~~~~~~~~~~-~---~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~k~~~~~~~~ 77 (631)
+..+|..+ ++.+++.|.+.++.. . .....+.+|+.|++++|.+++..|.........+ .+..
T Consensus 57 l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~-----~L~L------- 124 (390)
T 3o6n_A 57 MRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLT-----VLVL------- 124 (390)
T ss_dssp ESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCC-----EEEC-------
T ss_pred hhhCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCC-----EEEC-------
Confidence 34567664 677888888887742 1 1234678999999999999976666544332210 0000
Q ss_pred CCCCCCCCCCcccee---eCCCCCeEEEEeCCCCCcccCcchhcCCccCceeecccCcccCCCCcCcc------------
Q 042825 78 LKWSDPDPCQWSHVI---CSDDGQVTNIELQDQNRKGTVPPILKKLSSMAVMYLENNQLRGPIPSLVG------------ 142 (631)
Q Consensus 78 ~~w~~~~~C~w~gv~---C~~~~~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~L~~N~l~g~lP~~~~------------ 142 (631)
+. |....+. .....+++.|+|++|.+++..|..+.++++|++|+|++|++++.-...+.
T Consensus 125 -~~-----n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~L~~L~l~~n~l 198 (390)
T 3o6n_A 125 -ER-----NDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVDLSLIPSLFHANVSYNLL 198 (390)
T ss_dssp -CS-----SCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBCCGGGCTTCSEEECCSSCC
T ss_pred -CC-----CccCcCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCccccccccccceeecccccc
Confidence 00 0000000 01234688888888888876677788888888888888887753112222
Q ss_pred ----------------------------cccccccccccceecCCCCCCcCCCCCCcEEEccCCcccccCCCCCCCCccC
Q 042825 143 ----------------------------SLEFFSAYEANISGTIPDFIGTDTFPQLSYLDLGNNNLQGTIPSSFGMPFAD 194 (631)
Q Consensus 143 ----------------------------~L~~L~l~~n~l~g~ip~~~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~~~~~ 194 (631)
+|+.|++++|++++. ..+. .+++|++|+|++|.+++..|..
T Consensus 199 ~~~~~~~~L~~L~l~~n~l~~~~~~~~~~L~~L~l~~n~l~~~--~~l~--~l~~L~~L~Ls~n~l~~~~~~~------- 267 (390)
T 3o6n_A 199 STLAIPIAVEELDASHNSINVVRGPVNVELTILKLQHNNLTDT--AWLL--NYPGLVEVDLSYNELEKIMYHP------- 267 (390)
T ss_dssp SEEECCSSCSEEECCSSCCCEEECCCCSSCCEEECCSSCCCCC--GGGG--GCTTCSEEECCSSCCCEEESGG-------
T ss_pred cccCCCCcceEEECCCCeeeeccccccccccEEECCCCCCccc--HHHc--CCCCccEEECCCCcCCCcChhH-------
Confidence 344455555555432 2344 6778888888888888666654
Q ss_pred cCCCCCCCEEEeecCcCcccCChhhccCCCCCCEEEccCCCCcccCCCCCCCCceEEeecCCCcccC
Q 042825 195 ISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNNLLQGPTPRFNNSKLTVDMRTGSNCFCL 261 (631)
Q Consensus 195 ~~~l~~L~~L~L~~N~l~g~iP~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~~~~~~l~~~~n~~~~ 261 (631)
+.++++|+.|+|++|++++ +|.. +..+++|+.|+|++|++++.++.+........+++++|.+..
T Consensus 268 ~~~l~~L~~L~L~~n~l~~-~~~~-~~~l~~L~~L~L~~n~l~~~~~~~~~l~~L~~L~L~~N~i~~ 332 (390)
T 3o6n_A 268 FVKMQRLERLYISNNRLVA-LNLY-GQPIPTLKVLDLSHNHLLHVERNQPQFDRLENLYLDHNSIVT 332 (390)
T ss_dssp GTTCSSCCEEECCSSCCCE-EECS-SSCCTTCCEEECCSSCCCCCGGGHHHHTTCSEEECCSSCCCC
T ss_pred ccccccCCEEECCCCcCcc-cCcc-cCCCCCCCEEECCCCcceecCccccccCcCCEEECCCCccce
Confidence 4588899999999999984 6644 677889999999999988655443333344556678888765
|
| >2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.62 E-value=3.8e-15 Score=143.83 Aligned_cols=152 Identities=23% Similarity=0.333 Sum_probs=122.6
Q ss_pred EEEEeCCCCCcccCcchhcCCccCceeecccCcccCCCCcCcc---cccccccccccceecCCCCCCcCCCCCCcEEEcc
Q 042825 100 TNIELQDQNRKGTVPPILKKLSSMAVMYLENNQLRGPIPSLVG---SLEFFSAYEANISGTIPDFIGTDTFPQLSYLDLG 176 (631)
Q Consensus 100 ~~l~l~~n~l~g~ip~~~~~l~~L~~L~L~~N~l~g~lP~~~~---~L~~L~l~~n~l~g~ip~~~~~~~l~~L~~L~Ls 176 (631)
+.++.++++++ .+|..+ .++|++|+|++|++++..+..+. +|+.|++++|++++..+..+. .+++|++|+|+
T Consensus 10 ~~v~c~~~~l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~--~l~~L~~L~Ls 84 (208)
T 2o6s_A 10 TTVECYSQGRT-SVPTGI--PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFN--KLTSLTYLNLS 84 (208)
T ss_dssp TEEECCSSCCS-SCCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTT--TCTTCCEEECC
T ss_pred CEEEecCCCcc-CCCCCC--CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcC--CCCCcCEEECC
Confidence 57889999988 577654 46899999999999965554443 899999999999965555566 79999999999
Q ss_pred CCcccccCCCCCCCCccCcCCCCCCCEEEeecCcCcccCChhhccCCCCCCEEEccCCCCcccCCCC-CCCCceEEeecC
Q 042825 177 NNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNNLLQGPTPRF-NNSKLTVDMRTG 255 (631)
Q Consensus 177 ~N~l~g~iP~~~~~~~~~~~~l~~L~~L~L~~N~l~g~iP~~~~~~l~~L~~L~ls~N~l~g~~p~~-~~~~~~~~l~~~ 255 (631)
+|+++ .+|... +.++++|++|+|++|++++ +|...|..+++|+.|+|++|.+++.++.. ........++++
T Consensus 85 ~n~l~-~~~~~~------~~~l~~L~~L~L~~N~l~~-~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~ 156 (208)
T 2o6s_A 85 TNQLQ-SLPNGV------FDKLTQLKELALNTNQLQS-LPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLH 156 (208)
T ss_dssp SSCCC-CCCTTT------TTTCTTCCEEECCSSCCCC-CCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECC
T ss_pred CCcCC-ccCHhH------hcCccCCCEEEcCCCcCcc-cCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEec
Confidence 99999 555432 4589999999999999995 55555889999999999999999887764 334455667889
Q ss_pred CCcccCCCC
Q 042825 256 SNCFCLDDP 264 (631)
Q Consensus 256 ~n~~~~~~~ 264 (631)
+|.+.+..+
T Consensus 157 ~N~~~~~~~ 165 (208)
T 2o6s_A 157 DNPWDCTCP 165 (208)
T ss_dssp SCCBCCCTT
T ss_pred CCCeecCCC
Confidence 999887544
|
| >4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C} | Back alignment and structure |
|---|
Probab=99.62 E-value=3e-17 Score=188.21 Aligned_cols=193 Identities=16% Similarity=0.116 Sum_probs=125.5
Q ss_pred hhhHHHHHHHHHhCCCC---CCCCCCC--CCCCCccceeeCCCCCeEEE------------------EeCCCCCcc----
Q 042825 59 RPDAAVMQDLKASFVIP---KRLKWSD--PDPCQWSHVICSDDGQVTNI------------------ELQDQNRKG---- 111 (631)
Q Consensus 59 ~~~~~~l~~~k~~~~~~---~~~~w~~--~~~C~w~gv~C~~~~~l~~l------------------~l~~n~l~g---- 111 (631)
..+..+|.++....... ....|.. ...+.|.++.+.. ++++.| +|+.|.+.+
T Consensus 131 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~-~~~~~l~L~~n~~~~~~~~~l~~l~Ls~~~i~~~~~~ 209 (727)
T 4b8c_D 131 DCTKQALMEMADTLTDSKTAKKQQPTGDSTPSGTATNSAVST-PLTPKIELFANGKDEANQALLQHKKLSQYSIDEDDDI 209 (727)
T ss_dssp -CCCHHHHHHHHHHHHHHTTC-----------------------------------------------------------
T ss_pred ccchhhhhhhhhhcccccCcccCCCcCCCCccccCCCceecC-CccceEEeeCCCCCcchhhHhhcCccCcccccCcccc
Confidence 34566777776554221 1124522 2446788776643 334443 444444433
Q ss_pred -----cCcchhcCCccCceeecccCcccCCCCcCcc---cccccccccccceecCCCCCCcCCCCCCcEEEccCCccccc
Q 042825 112 -----TVPPILKKLSSMAVMYLENNQLRGPIPSLVG---SLEFFSAYEANISGTIPDFIGTDTFPQLSYLDLGNNNLQGT 183 (631)
Q Consensus 112 -----~ip~~~~~l~~L~~L~L~~N~l~g~lP~~~~---~L~~L~l~~n~l~g~ip~~~~~~~l~~L~~L~Ls~N~l~g~ 183 (631)
..|..+..+..|+.|+|++|.+. .+|..+. +|+.|+|++|+|+ .+|..++ .|++|++|||++|+|+ .
T Consensus 210 ~n~~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~--~l~~L~~L~Ls~N~l~-~ 284 (727)
T 4b8c_D 210 ENRMVMPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIK--NLSNLRVLDLSHNRLT-S 284 (727)
T ss_dssp ------------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGG--GGTTCCEEECTTSCCS-S
T ss_pred ccceecChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhh--CCCCCCEEeCcCCcCC-c
Confidence 23667889999999999999998 7887654 8999999999999 8999998 8999999999999999 8
Q ss_pred CCCCCCCCccCcCCCCCCCEEEeecCcCcccCChhhccCCCCCCEEEccCCCCcccCCCCCCC--CceEEeecCCCcccC
Q 042825 184 IPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNNLLQGPTPRFNNS--KLTVDMRTGSNCFCL 261 (631)
Q Consensus 184 iP~~~~~~~~~~~~l~~L~~L~L~~N~l~g~iP~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~--~~~~~l~~~~n~~~~ 261 (631)
||..+ ++|++|++|+|++|.|+ .||.. |+.+++|+.|+|++|.|+|.+|..... .....+++++|.+.+
T Consensus 285 lp~~~-------~~l~~L~~L~L~~N~l~-~lp~~-~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~ 355 (727)
T 4b8c_D 285 LPAEL-------GSCFQLKYFYFFDNMVT-TLPWE-FGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEI 355 (727)
T ss_dssp CCSSG-------GGGTTCSEEECCSSCCC-CCCSS-TTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_pred cChhh-------cCCCCCCEEECCCCCCC-ccChh-hhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccC
Confidence 99775 48999999999999998 89976 999999999999999999999875432 112235578999999
Q ss_pred CCCCC
Q 042825 262 DDPGL 266 (631)
Q Consensus 262 ~~~~~ 266 (631)
.+|..
T Consensus 356 ~~p~~ 360 (727)
T 4b8c_D 356 PLPHE 360 (727)
T ss_dssp CCCCC
T ss_pred cCccc
Confidence 88764
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.62 E-value=1.1e-15 Score=178.69 Aligned_cols=137 Identities=16% Similarity=0.089 Sum_probs=81.5
Q ss_pred CCCc-eecccceeehhhhcc-----ccchhhhhhhhhhhccccccccccCCCCCCCChhhHHHHHHHHHhCCCCCCCCCC
Q 042825 8 PSNF-QLFGFPRLTFRDCMT-----ATSELEREKTERVQGDRRKKRRKIPSASSNQSRPDAAVMQDLKASFVIPKRLKWS 81 (631)
Q Consensus 8 ~~~~-~~~~~~~~~~~~~~~-----~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~k~~~~~~~~~~w~ 81 (631)
|+.| ++.+|+.|.+.++.. +.....+.+|+.|++++|.+++..|.+...+...+...|.
T Consensus 41 ~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls--------------- 105 (844)
T 3j0a_A 41 ASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAFQGLFHLFELRLY--------------- 105 (844)
T ss_dssp SSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTSSCSCSSCCCEECT---------------
T ss_pred hhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhHccCCcccCEeeCc---------------
Confidence 5556 666777777766621 1223456788888888888887777766654321111000
Q ss_pred CCCCCCccce-----eeCCCCCeEEEEeCCCCCcccCc-chhcCCccCceeecccCcccCCCCcCcc-----cccccccc
Q 042825 82 DPDPCQWSHV-----ICSDDGQVTNIELQDQNRKGTVP-PILKKLSSMAVMYLENNQLRGPIPSLVG-----SLEFFSAY 150 (631)
Q Consensus 82 ~~~~C~w~gv-----~C~~~~~l~~l~l~~n~l~g~ip-~~~~~l~~L~~L~L~~N~l~g~lP~~~~-----~L~~L~l~ 150 (631)
.|...+. ......+++.|+|++|.+++..+ +.|++|++|++|+|++|.+++..|..+. +|+.|+++
T Consensus 106 ---~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~l~~~~L~~L~L~ 182 (844)
T 3j0a_A 106 ---FCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQGKTLSFFSLA 182 (844)
T ss_dssp ---TCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGHHHHHCSSCCCEEC
T ss_pred ---CCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHcccccCCccceEECC
Confidence 0111110 01233578888888888876654 4688888888888888888776665543 45555555
Q ss_pred cccceecCCCCC
Q 042825 151 EANISGTIPDFI 162 (631)
Q Consensus 151 ~n~l~g~ip~~~ 162 (631)
.|++.+.+|..+
T Consensus 183 ~n~l~~~~~~~~ 194 (844)
T 3j0a_A 183 ANSLYSRVSVDW 194 (844)
T ss_dssp CSBSCCCCCCCC
T ss_pred CCccccccccch
Confidence 555555555443
|
| >4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.62 E-value=3.6e-16 Score=160.93 Aligned_cols=159 Identities=17% Similarity=0.212 Sum_probs=122.9
Q ss_pred CeEEEEeCCCCCcccCcchh--cCCccCceeecccCcccCCCCc-------CcccccccccccccceecCCCCCCcCCCC
Q 042825 98 QVTNIELQDQNRKGTVPPIL--KKLSSMAVMYLENNQLRGPIPS-------LVGSLEFFSAYEANISGTIPDFIGTDTFP 168 (631)
Q Consensus 98 ~l~~l~l~~n~l~g~ip~~~--~~l~~L~~L~L~~N~l~g~lP~-------~~~~L~~L~l~~n~l~g~ip~~~~~~~l~ 168 (631)
+++.|+|++|.+++.+|..+ ..+++|++|+|++|++++..|. .+.+|+.|++++|++++..|..++ .++
T Consensus 92 ~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~--~l~ 169 (310)
T 4glp_A 92 RLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVR--AFP 169 (310)
T ss_dssp CCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCC--CCT
T ss_pred ceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhc--cCC
Confidence 58999999999999999888 8999999999999999986662 144899999999999988888887 889
Q ss_pred CCcEEEccCCccccc--CCCCCCCCccCcCCCCCCCEEEeecCcCcccCCh---hhccCCCCCCEEEccCCCCcccCCCC
Q 042825 169 QLSYLDLGNNNLQGT--IPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPV---SSFNNHPKLTTLNLTNNLLQGPTPRF 243 (631)
Q Consensus 169 ~L~~L~Ls~N~l~g~--iP~~~~~~~~~~~~l~~L~~L~L~~N~l~g~iP~---~~~~~l~~L~~L~ls~N~l~g~~p~~ 243 (631)
+|++|||++|++.+. +|.... ++++++|++|+|++|+++ .+|. ..+..+++|++|+|++|++++.+|..
T Consensus 170 ~L~~L~Ls~N~l~~~~~~~~~~~-----~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~ 243 (310)
T 4glp_A 170 ALTSLDLSDNPGLGERGLMAALC-----PHKFPAIQNLALRNTGME-TPTGVCAALAAAGVQPHSLDLSHNSLRATVNPS 243 (310)
T ss_dssp TCCEEECCSCTTCHHHHHHTTSC-----TTSSCCCCSCBCCSSCCC-CHHHHHHHHHHHTCCCSSEECTTSCCCCCCCSC
T ss_pred CCCEEECCCCCCccchhhhHHHh-----hhcCCCCCEEECCCCCCC-chHHHHHHHHhcCCCCCEEECCCCCCCccchhh
Confidence 999999999998753 433221 357888888899988887 3442 23567788888999998888886543
Q ss_pred C-CC---CceEEeecCCCcccCCCCC
Q 042825 244 N-NS---KLTVDMRTGSNCFCLDDPG 265 (631)
Q Consensus 244 ~-~~---~~~~~l~~~~n~~~~~~~~ 265 (631)
. .. .....+++++|.+. .+|.
T Consensus 244 ~~~~~~~~~L~~L~Ls~N~l~-~lp~ 268 (310)
T 4glp_A 244 APRCMWSSALNSLNLSFAGLE-QVPK 268 (310)
T ss_dssp CSSCCCCTTCCCEECCSSCCC-SCCS
T ss_pred HHhccCcCcCCEEECCCCCCC-chhh
Confidence 2 22 24455677888887 3554
|
| >2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C* | Back alignment and structure |
|---|
Probab=99.61 E-value=2.2e-15 Score=148.86 Aligned_cols=153 Identities=18% Similarity=0.235 Sum_probs=124.4
Q ss_pred CCeEEEEeCCCCCcccCcchhcCCccCceeecccCc-ccCCCCcCc---cccccccccc-ccceecCCCCCCcCCCCCCc
Q 042825 97 GQVTNIELQDQNRKGTVPPILKKLSSMAVMYLENNQ-LRGPIPSLV---GSLEFFSAYE-ANISGTIPDFIGTDTFPQLS 171 (631)
Q Consensus 97 ~~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~L~~N~-l~g~lP~~~---~~L~~L~l~~-n~l~g~ip~~~~~~~l~~L~ 171 (631)
..++.|+|++|++++..+..|.++++|++|+|++|. +++..+..+ .+|+.|++++ |++++..+..+. .+++|+
T Consensus 31 ~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~--~l~~L~ 108 (239)
T 2xwt_C 31 PSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALK--ELPLLK 108 (239)
T ss_dssp TTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEE--CCTTCC
T ss_pred CcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhC--CCCCCC
Confidence 478999999999997666689999999999999997 874434344 3899999999 999976667777 799999
Q ss_pred EEEccCCcccccCCCCCCCCccCcCCCCCCC---EEEeecC-cCcccCChhhccCCCCCC-EEEccCCCCcccCCCCCCC
Q 042825 172 YLDLGNNNLQGTIPSSFGMPFADISNLSTLE---DLSLGHN-KLTGIFPVSSFNNHPKLT-TLNLTNNLLQGPTPRFNNS 246 (631)
Q Consensus 172 ~L~Ls~N~l~g~iP~~~~~~~~~~~~l~~L~---~L~L~~N-~l~g~iP~~~~~~l~~L~-~L~ls~N~l~g~~p~~~~~ 246 (631)
+|+|++|++++ +|. + +++++|+ +|+|++| +++ .+|...|..+++|+ .|++++|.++...+.....
T Consensus 109 ~L~l~~n~l~~-lp~-~-------~~l~~L~~L~~L~l~~N~~l~-~i~~~~~~~l~~L~~~L~l~~n~l~~i~~~~~~~ 178 (239)
T 2xwt_C 109 FLGIFNTGLKM-FPD-L-------TKVYSTDIFFILEITDNPYMT-SIPVNAFQGLCNETLTLKLYNNGFTSVQGYAFNG 178 (239)
T ss_dssp EEEEEEECCCS-CCC-C-------TTCCBCCSEEEEEEESCTTCC-EECTTTTTTTBSSEEEEECCSCCCCEECTTTTTT
T ss_pred EEeCCCCCCcc-ccc-c-------ccccccccccEEECCCCcchh-hcCcccccchhcceeEEEcCCCCCcccCHhhcCC
Confidence 99999999994 885 3 3667776 9999999 998 56656689999999 9999999999555444444
Q ss_pred CceEEeecCCCc-ccC
Q 042825 247 KLTVDMRTGSNC-FCL 261 (631)
Q Consensus 247 ~~~~~l~~~~n~-~~~ 261 (631)
.....+++++|. +..
T Consensus 179 ~~L~~L~L~~n~~l~~ 194 (239)
T 2xwt_C 179 TKLDAVYLNKNKYLTV 194 (239)
T ss_dssp CEEEEEECTTCTTCCE
T ss_pred CCCCEEEcCCCCCccc
Confidence 456678889995 765
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.61 E-value=1.9e-15 Score=168.58 Aligned_cols=154 Identities=17% Similarity=0.199 Sum_probs=129.7
Q ss_pred CCCCeEEEEeCCCCCcccCcchhcCCccCceeecccCcccC--CCCcCc---ccccccccccccceecCCCC-CCcCCCC
Q 042825 95 DDGQVTNIELQDQNRKGTVPPILKKLSSMAVMYLENNQLRG--PIPSLV---GSLEFFSAYEANISGTIPDF-IGTDTFP 168 (631)
Q Consensus 95 ~~~~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~L~~N~l~g--~lP~~~---~~L~~L~l~~n~l~g~ip~~-~~~~~l~ 168 (631)
...+++.|+|++|.+++.+|..++++++|++|+|++|++++ .+|..+ .+|+.|++++|++++.+|.. +. .++
T Consensus 351 ~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~--~l~ 428 (562)
T 3a79_B 351 SPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCA--WAE 428 (562)
T ss_dssp SCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCC--CCT
T ss_pred CCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhc--Ccc
Confidence 44689999999999999999999999999999999999996 334444 48999999999999878875 44 789
Q ss_pred CCcEEEccCCcccccCCCCCCCCccCcCCCCCCCEEEeecCcCcccCChhhccCCCCCCEEEccCCCCcccCCC-CCCCC
Q 042825 169 QLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNNLLQGPTPR-FNNSK 247 (631)
Q Consensus 169 ~L~~L~Ls~N~l~g~iP~~~~~~~~~~~~l~~L~~L~L~~N~l~g~iP~~~~~~l~~L~~L~ls~N~l~g~~p~-~~~~~ 247 (631)
+|++|+|++|++++.+|..++ ++|++|+|++|+++ .||.. +..+++|+.|+|++|+|++.++. +....
T Consensus 429 ~L~~L~l~~n~l~~~~~~~l~---------~~L~~L~L~~N~l~-~ip~~-~~~l~~L~~L~L~~N~l~~l~~~~~~~l~ 497 (562)
T 3a79_B 429 SILVLNLSSNMLTGSVFRCLP---------PKVKVLDLHNNRIM-SIPKD-VTHLQALQELNVASNQLKSVPDGVFDRLT 497 (562)
T ss_dssp TCCEEECCSSCCCGGGGSSCC---------TTCSEEECCSSCCC-CCCTT-TTSSCCCSEEECCSSCCCCCCTTSTTTCT
T ss_pred cCCEEECCCCCCCcchhhhhc---------CcCCEEECCCCcCc-ccChh-hcCCCCCCEEECCCCCCCCCCHHHHhcCC
Confidence 999999999999988886541 78999999999999 89977 55999999999999999965555 44444
Q ss_pred ceEEeecCCCcccC
Q 042825 248 LTVDMRTGSNCFCL 261 (631)
Q Consensus 248 ~~~~l~~~~n~~~~ 261 (631)
....+++++|.+.+
T Consensus 498 ~L~~L~l~~N~~~c 511 (562)
T 3a79_B 498 SLQYIWLHDNPWDC 511 (562)
T ss_dssp TCCCEECCSCCBCC
T ss_pred CCCEEEecCCCcCC
Confidence 55567789998875
|
| >2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.61 E-value=2e-15 Score=141.86 Aligned_cols=132 Identities=24% Similarity=0.383 Sum_probs=92.0
Q ss_pred CCccceeeCCCCCeEEEEeCCCCCcccCcchhcCCccCceeecccCcccCCCCcCcc---cccccccccccceecCCCCC
Q 042825 86 CQWSHVICSDDGQVTNIELQDQNRKGTVPPILKKLSSMAVMYLENNQLRGPIPSLVG---SLEFFSAYEANISGTIPDFI 162 (631)
Q Consensus 86 C~w~gv~C~~~~~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~L~~N~l~g~lP~~~~---~L~~L~l~~n~l~g~ip~~~ 162 (631)
|.|.++.| ++++++ .+|..+ .++|++|+|++|++++..+..++ +|+.|++++|++++..+..+
T Consensus 7 C~~~~l~~-----------~~~~l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~ 72 (177)
T 2o6r_A 7 CSGTEIRC-----------NSKGLT-SVPTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVF 72 (177)
T ss_dssp EETTEEEC-----------CSSCCS-SCCTTC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTT
T ss_pred eCCCEEEe-----------cCCCCc-cCCCCC--CCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHc
Confidence 45666666 445555 466443 36888999999998854444433 77788888888875545555
Q ss_pred CcCCCCCCcEEEccCCcccccCCCCCCCCccCcCCCCCCCEEEeecCcCcccCChhhccCCCCCCEEEccCCCCcccCC
Q 042825 163 GTDTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNNLLQGPTP 241 (631)
Q Consensus 163 ~~~~l~~L~~L~Ls~N~l~g~iP~~~~~~~~~~~~l~~L~~L~L~~N~l~g~iP~~~~~~l~~L~~L~ls~N~l~g~~p 241 (631)
. .+++|++|+|++|+++ .+|... +.++++|++|+|++|+++ .+|...+..+++|++|+|++|.+++..|
T Consensus 73 ~--~l~~L~~L~l~~N~l~-~~~~~~------~~~l~~L~~L~l~~N~l~-~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 73 D--KLTKLTILYLHENKLQ-SLPNGV------FDKLTQLKELALDTNQLK-SVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp T--TCTTCCEEECCSSCCC-CCCTTT------TTTCTTCCEEECCSSCCS-CCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred c--CCCccCEEECCCCCcc-ccCHHH------hhCCcccCEEECcCCcce-EeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 6 6788888888888888 444322 347788888888888888 4555556778888888888888877665
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* | Back alignment and structure |
|---|
Probab=99.61 E-value=1.1e-15 Score=170.00 Aligned_cols=133 Identities=16% Similarity=0.175 Sum_probs=102.8
Q ss_pred CCeEEEEeCCCCCcccCcchhcCCccCceeecccCcccC-CCCcCcc---cccccccccccceecCC-CCCCcCCCCCCc
Q 042825 97 GQVTNIELQDQNRKGTVPPILKKLSSMAVMYLENNQLRG-PIPSLVG---SLEFFSAYEANISGTIP-DFIGTDTFPQLS 171 (631)
Q Consensus 97 ~~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~L~~N~l~g-~lP~~~~---~L~~L~l~~n~l~g~ip-~~~~~~~l~~L~ 171 (631)
.+++.|+|++|.+++..|..|+++++|++|+|++|++++ .+|..++ +|+.|++++|++.+.+| ..+. .+++|+
T Consensus 74 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~--~l~~L~ 151 (549)
T 2z81_A 74 GSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFA--GLTSLN 151 (549)
T ss_dssp TTCCEEECTTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTT--TCCEEE
T ss_pred ccCCEEECCCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhh--cccccC
Confidence 468888888888887666678888888888888888876 4555554 78888888888655665 4566 788888
Q ss_pred EEEccCCcccccCCCCCCCCccCcCCCCCCCEEEeecCcCcccCChhhccCCCCCCEEEccCCCCccc
Q 042825 172 YLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNNLLQGP 239 (631)
Q Consensus 172 ~L~Ls~N~l~g~iP~~~~~~~~~~~~l~~L~~L~L~~N~l~g~iP~~~~~~l~~L~~L~ls~N~l~g~ 239 (631)
+|+|++|++++.+|..+ +++++|++|++++|.+. .+|...+..+++|++|++++|++++.
T Consensus 152 ~L~L~~n~l~~~~~~~l-------~~l~~L~~L~l~~n~~~-~~~~~~~~~l~~L~~L~L~~n~l~~~ 211 (549)
T 2z81_A 152 ELEIKALSLRNYQSQSL-------KSIRDIHHLTLHLSESA-FLLEIFADILSSVRYLELRDTNLARF 211 (549)
T ss_dssp EEEEEETTCCEECTTTT-------TTCSEEEEEEEECSBST-THHHHHHHSTTTBSEEEEESCBCTTC
T ss_pred eeeccCCcccccChhhh-------hccccCceEecccCccc-ccchhhHhhcccccEEEccCCccccc
Confidence 88888888887777665 47888888888888876 56665556788888888888888874
|
| >1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7 | Back alignment and structure |
|---|
Probab=99.61 E-value=7.1e-16 Score=147.22 Aligned_cols=124 Identities=23% Similarity=0.338 Sum_probs=108.3
Q ss_pred CCccceeeCCC----------CCeEEEEeCCCCCcccCcc-hhcCCccCceeecccCcccCCCCcCcc---ccccccccc
Q 042825 86 CQWSHVICSDD----------GQVTNIELQDQNRKGTVPP-ILKKLSSMAVMYLENNQLRGPIPSLVG---SLEFFSAYE 151 (631)
Q Consensus 86 C~w~gv~C~~~----------~~l~~l~l~~n~l~g~ip~-~~~~l~~L~~L~L~~N~l~g~lP~~~~---~L~~L~l~~ 151 (631)
|.|..+.|... .+++.|+|++|.+++..+. .++++++|++|+|++|+|++..|..+. +|+.|+|++
T Consensus 8 C~~~~l~~s~~~l~~ip~~~~~~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 8 CEGTTVDCTGRGLKEIPRDIPLHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp EETTEEECTTSCCSSCCSCCCTTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred ECCCEEEcCCCCcCcCccCCCCCCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 57888888632 3789999999999976654 489999999999999999988888775 899999999
Q ss_pred ccceecCCCCCCcCCCCCCcEEEccCCcccccCCCCCCCCccCcCCCCCCCEEEeecCcCcccCChh
Q 042825 152 ANISGTIPDFIGTDTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVS 218 (631)
Q Consensus 152 n~l~g~ip~~~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~~~~~~~~l~~L~~L~L~~N~l~g~iP~~ 218 (631)
|++++..|..+. .+++|++|+|++|+|++.+|..+ ..+++|++|+|++|.|++..+..
T Consensus 88 N~l~~~~~~~~~--~l~~L~~L~L~~N~l~~~~~~~~-------~~l~~L~~L~L~~N~l~c~c~l~ 145 (192)
T 1w8a_A 88 NKIKEISNKMFL--GLHQLKTLNLYDNQISCVMPGSF-------EHLNSLTSLNLASNPFNCNCHLA 145 (192)
T ss_dssp CCCCEECSSSST--TCTTCCEEECCSSCCCEECTTSS-------TTCTTCCEEECTTCCBCCSGGGH
T ss_pred CcCCccCHHHhc--CCCCCCEEECCCCcCCeeCHHHh-------hcCCCCCEEEeCCCCccCcCcch
Confidence 999998888888 89999999999999998878665 48999999999999999887743
|
| >4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A* | Back alignment and structure |
|---|
Probab=99.61 E-value=1.3e-15 Score=171.81 Aligned_cols=155 Identities=17% Similarity=0.154 Sum_probs=126.0
Q ss_pred CCeEEEEeCCCCCcccCcchhcCCccCceeecccCcccCCCCcCcc---cccccccccccceecCCCCCCcCCCCCCcEE
Q 042825 97 GQVTNIELQDQNRKGTVPPILKKLSSMAVMYLENNQLRGPIPSLVG---SLEFFSAYEANISGTIPDFIGTDTFPQLSYL 173 (631)
Q Consensus 97 ~~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~L~~N~l~g~lP~~~~---~L~~L~l~~n~l~g~ip~~~~~~~l~~L~~L 173 (631)
..++.|||++|++++..|..|.++++|++|+|++|+|++..|..|. +|++|+|++|++++..|..|. .+++|++|
T Consensus 52 ~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~--~L~~L~~L 129 (635)
T 4g8a_A 52 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFS--GLSSLQKL 129 (635)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGT--TCTTCCEE
T ss_pred cCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhc--CCCCCCEE
Confidence 3789999999999976667899999999999999999965555554 899999999999976666777 89999999
Q ss_pred EccCCcccccCCCCCCCCccCcCCCCCCCEEEeecCcCcc-cCChhhccCCCCCCEEEccCCCCcccCCCCCCC-----C
Q 042825 174 DLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTG-IFPVSSFNNHPKLTTLNLTNNLLQGPTPRFNNS-----K 247 (631)
Q Consensus 174 ~Ls~N~l~g~iP~~~~~~~~~~~~l~~L~~L~L~~N~l~g-~iP~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~-----~ 247 (631)
+|++|+|+ .+|+.. |+++++|++|+|++|++++ .+|. .++.+++|++|+|++|+|++..|..... .
T Consensus 130 ~Ls~N~l~-~l~~~~------~~~L~~L~~L~Ls~N~l~~~~~~~-~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~l~~ 201 (635)
T 4g8a_A 130 VAVETNLA-SLENFP------IGHLKTLKELNVAHNLIQSFKLPE-YFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPL 201 (635)
T ss_dssp ECTTSCCC-CSTTCC------CTTCTTCCEEECCSSCCCCCCCCG-GGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTT
T ss_pred ECCCCcCC-CCChhh------hhcCcccCeeccccCccccCCCch-hhccchhhhhhcccCccccccccccccchhhhhh
Confidence 99999999 555432 5699999999999999985 3565 4889999999999999999987763221 1
Q ss_pred ceEEeecCCCcccC
Q 042825 248 LTVDMRTGSNCFCL 261 (631)
Q Consensus 248 ~~~~l~~~~n~~~~ 261 (631)
....++++.|.+..
T Consensus 202 ~~~~~~ls~n~l~~ 215 (635)
T 4g8a_A 202 LNLSLDLSLNPMNF 215 (635)
T ss_dssp CCCEEECTTCCCCE
T ss_pred hhhhhhcccCcccc
Confidence 22344567777765
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=99.61 E-value=5.2e-16 Score=160.29 Aligned_cols=210 Identities=16% Similarity=0.121 Sum_probs=151.5
Q ss_pred cccceeehhhhcc----ccchhhhhhhhhhhccccccccccCCCCCCCChhhHHHHHHHHHhCCCCCCCCCCCCCCCCcc
Q 042825 14 FGFPRLTFRDCMT----ATSELEREKTERVQGDRRKKRRKIPSASSNQSRPDAAVMQDLKASFVIPKRLKWSDPDPCQWS 89 (631)
Q Consensus 14 ~~~~~~~~~~~~~----~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~k~~~~~~~~~~w~~~~~C~w~ 89 (631)
.+++.|.+.++.. +.....+.+|+.|++++|++++..+ ..... .+..-.-..|...
T Consensus 34 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~------------------~L~~L~Ls~n~l~ 93 (317)
T 3o53_A 34 WNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLS------------------TLRTLDLNNNYVQ 93 (317)
T ss_dssp GGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCT------------------TCCEEECCSSEEE
T ss_pred CCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcC------------------CCCEEECcCCccc
Confidence 3677787777743 1223467999999999999986554 11110 0111001123333
Q ss_pred ceeeCCCCCeEEEEeCCCCCcccCcchhcCCccCceeecccCcccCCCCcCcc---cccccccccccceecCCCCCCcCC
Q 042825 90 HVICSDDGQVTNIELQDQNRKGTVPPILKKLSSMAVMYLENNQLRGPIPSLVG---SLEFFSAYEANISGTIPDFIGTDT 166 (631)
Q Consensus 90 gv~C~~~~~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~L~~N~l~g~lP~~~~---~L~~L~l~~n~l~g~ip~~~~~~~ 166 (631)
++.- ..+++.|++++|.+++..+. .+++|++|+|++|++++..|..++ +|+.|++++|++++..|..+.. .
T Consensus 94 ~l~~--~~~L~~L~l~~n~l~~~~~~---~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~-~ 167 (317)
T 3o53_A 94 ELLV--GPSIETLHAANNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAA-S 167 (317)
T ss_dssp EEEE--CTTCCEEECCSSCCSEEEEC---CCSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGG-G
T ss_pred cccC--CCCcCEEECCCCccCCcCcc---ccCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhh-c
Confidence 3332 25789999999999875543 367899999999999976665554 8999999999999877776631 5
Q ss_pred CCCCcEEEccCCcccccCCCCCCCCccCcCCCCCCCEEEeecCcCcccCChhhccCCCCCCEEEccCCCCcccCCCCCCC
Q 042825 167 FPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNNLLQGPTPRFNNS 246 (631)
Q Consensus 167 l~~L~~L~Ls~N~l~g~iP~~~~~~~~~~~~l~~L~~L~L~~N~l~g~iP~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~ 246 (631)
+++|++|+|++|+++ .+|.. ..+++|++|+|++|+++ .+|.. +..+++|+.|+|++|.+++..+.+...
T Consensus 168 l~~L~~L~L~~N~l~-~~~~~--------~~l~~L~~L~Ls~N~l~-~l~~~-~~~l~~L~~L~L~~N~l~~l~~~~~~l 236 (317)
T 3o53_A 168 SDTLEHLNLQYNFIY-DVKGQ--------VVFAKLKTLDLSSNKLA-FMGPE-FQSAAGVTWISLRNNKLVLIEKALRFS 236 (317)
T ss_dssp TTTCCEEECTTSCCC-EEECC--------CCCTTCCEEECCSSCCC-EECGG-GGGGTTCSEEECTTSCCCEECTTCCCC
T ss_pred cCcCCEEECCCCcCc-ccccc--------cccccCCEEECCCCcCC-cchhh-hcccCcccEEECcCCcccchhhHhhcC
Confidence 789999999999998 45533 25899999999999999 46655 888999999999999999765555444
Q ss_pred CceEEeecCCCccc
Q 042825 247 KLTVDMRTGSNCFC 260 (631)
Q Consensus 247 ~~~~~l~~~~n~~~ 260 (631)
.....+++++|.+.
T Consensus 237 ~~L~~L~l~~N~~~ 250 (317)
T 3o53_A 237 QNLEHFDLRGNGFH 250 (317)
T ss_dssp TTCCEEECTTCCCB
T ss_pred CCCCEEEccCCCcc
Confidence 55566778999876
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.60 E-value=1.1e-15 Score=146.56 Aligned_cols=150 Identities=13% Similarity=0.150 Sum_probs=121.1
Q ss_pred CCeEEEEeCCCCCcccCcchhcCCccCceeecccCcccCCCCc--CcccccccccccccceecCCCCCCcCCCCCCcEEE
Q 042825 97 GQVTNIELQDQNRKGTVPPILKKLSSMAVMYLENNQLRGPIPS--LVGSLEFFSAYEANISGTIPDFIGTDTFPQLSYLD 174 (631)
Q Consensus 97 ~~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~L~~N~l~g~lP~--~~~~L~~L~l~~n~l~g~ip~~~~~~~l~~L~~L~ 174 (631)
.+++.|++++|.++ .+| .+..+++|++|++++|.++ .++. .+.+|+.|++++|++++..|..++ .+++|++|+
T Consensus 44 ~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~-~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~--~l~~L~~L~ 118 (197)
T 4ezg_A 44 NSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT-NYNPISGLSNLERLRIMGKDVTSDKIPNLS--GLTSLTLLD 118 (197)
T ss_dssp HTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS-CCGGGTTCTTCCEEEEECTTCBGGGSCCCT--TCTTCCEEE
T ss_pred CCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC-cchhhhcCCCCCEEEeECCccCcccChhhc--CCCCCCEEE
Confidence 47899999999999 777 6999999999999999776 3332 234899999999999988899888 899999999
Q ss_pred ccCCcccccCCCCCCCCccCcCCCCCCCEEEeecCcCcccCChhhccCCCCCCEEEccCCCCcccCCCCCCCCceEEeec
Q 042825 175 LGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNNLLQGPTPRFNNSKLTVDMRT 254 (631)
Q Consensus 175 Ls~N~l~g~iP~~~~~~~~~~~~l~~L~~L~L~~N~l~g~iP~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~~~~~~l~~ 254 (631)
|++|++++..|.. ++++++|++|+|++|++.+.+| . +..+++|+.|++++|.+++.. .+........+++
T Consensus 119 Ls~n~i~~~~~~~-------l~~l~~L~~L~L~~n~~i~~~~-~-l~~l~~L~~L~l~~n~i~~~~-~l~~l~~L~~L~l 188 (197)
T 4ezg_A 119 ISHSAHDDSILTK-------INTLPKVNSIDLSYNGAITDIM-P-LKTLPELKSLNIQFDGVHDYR-GIEDFPKLNQLYA 188 (197)
T ss_dssp CCSSBCBGGGHHH-------HTTCSSCCEEECCSCTBCCCCG-G-GGGCSSCCEEECTTBCCCCCT-TGGGCSSCCEEEE
T ss_pred ecCCccCcHhHHH-------HhhCCCCCEEEccCCCCccccH-h-hcCCCCCCEEECCCCCCcChH-HhccCCCCCEEEe
Confidence 9999999767754 4589999999999999444777 3 889999999999999998844 4444444556677
Q ss_pred CCCcccC
Q 042825 255 GSNCFCL 261 (631)
Q Consensus 255 ~~n~~~~ 261 (631)
++|++.+
T Consensus 189 ~~N~i~~ 195 (197)
T 4ezg_A 189 FSQTIGG 195 (197)
T ss_dssp CBC----
T ss_pred eCcccCC
Confidence 8888754
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A | Back alignment and structure |
|---|
Probab=99.60 E-value=7.9e-15 Score=159.09 Aligned_cols=141 Identities=26% Similarity=0.409 Sum_probs=114.3
Q ss_pred CCeEEEEeCCCCCcccCcchhcCCccCceeecccCcccCCCCcCcccccccccccccceecCCCCCCcCCCCCCcEEEcc
Q 042825 97 GQVTNIELQDQNRKGTVPPILKKLSSMAVMYLENNQLRGPIPSLVGSLEFFSAYEANISGTIPDFIGTDTFPQLSYLDLG 176 (631)
Q Consensus 97 ~~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~L~~N~l~g~lP~~~~~L~~L~l~~n~l~g~ip~~~~~~~l~~L~~L~Ls 176 (631)
.+++.|+|++|.+++ +| .++++++|++|++++|++++ +|..+.+|+.|++++|++++ +| .++ .+++|++|+++
T Consensus 131 ~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l~~N~l~~-lp~~~~~L~~L~L~~n~l~~-l~-~~~--~l~~L~~L~l~ 203 (454)
T 1jl5_A 131 PLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDVDNNSLKK-LPDLPPSLEFIAAGNNQLEE-LP-ELQ--NLPFLTAIYAD 203 (454)
T ss_dssp TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSC-CCCCCTTCCEEECCSSCCSS-CC-CCT--TCTTCCEEECC
T ss_pred CCCCEEECcCCCCCC-Cc-ccCCCCCCCEEECCCCcCcc-cCCCcccccEEECcCCcCCc-Cc-ccc--CCCCCCEEECC
Confidence 479999999999996 88 59999999999999999995 88888899999999999997 77 576 89999999999
Q ss_pred CCcccccCCCCCCCCccCcCCCCCCCEEEeecCcCcccCChhhccCCCCCCEEEccCCCCcccCCCCCCCCceEEeecCC
Q 042825 177 NNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNNLLQGPTPRFNNSKLTVDMRTGS 256 (631)
Q Consensus 177 ~N~l~g~iP~~~~~~~~~~~~l~~L~~L~L~~N~l~g~iP~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~~~~~~l~~~~ 256 (631)
+|++++ +|.. .++|++|+|++|+++ .+| . ++.+++|++|++++|++++ +|.... ....+++++
T Consensus 204 ~N~l~~-l~~~----------~~~L~~L~l~~n~l~-~lp-~-~~~l~~L~~L~l~~N~l~~-l~~~~~--~L~~L~l~~ 266 (454)
T 1jl5_A 204 NNSLKK-LPDL----------PLSLESIVAGNNILE-ELP-E-LQNLPFLTTIYADNNLLKT-LPDLPP--SLEALNVRD 266 (454)
T ss_dssp SSCCSS-CCCC----------CTTCCEEECCSSCCS-SCC-C-CTTCTTCCEEECCSSCCSS-CCSCCT--TCCEEECCS
T ss_pred CCcCCc-CCCC----------cCcccEEECcCCcCC-ccc-c-cCCCCCCCEEECCCCcCCc-cccccc--ccCEEECCC
Confidence 999994 7743 257888888888888 677 3 7788888888888888876 333322 233455677
Q ss_pred CcccC
Q 042825 257 NCFCL 261 (631)
Q Consensus 257 n~~~~ 261 (631)
|.+.+
T Consensus 267 N~l~~ 271 (454)
T 1jl5_A 267 NYLTD 271 (454)
T ss_dssp SCCSC
T ss_pred Ccccc
Confidence 77766
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* | Back alignment and structure |
|---|
Probab=99.60 E-value=3.2e-15 Score=170.59 Aligned_cols=159 Identities=18% Similarity=0.160 Sum_probs=132.2
Q ss_pred CCeEEEEeCCCCCcccCcchhcCCccCceeecccCcccCCCCcCcc---cccccccccccceecCCCCCCcCCCCCCcEE
Q 042825 97 GQVTNIELQDQNRKGTVPPILKKLSSMAVMYLENNQLRGPIPSLVG---SLEFFSAYEANISGTIPDFIGTDTFPQLSYL 173 (631)
Q Consensus 97 ~~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~L~~N~l~g~lP~~~~---~L~~L~l~~n~l~g~ip~~~~~~~l~~L~~L 173 (631)
.+++.|+|++|.+++..+..|.++++|++|+|++|.+++..|..++ +|++|++++|++++..+..++ .+++|++|
T Consensus 25 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~--~l~~L~~L 102 (680)
T 1ziw_A 25 TNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFA--FCTNLTEL 102 (680)
T ss_dssp TTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTT--TCTTCSEE
T ss_pred CCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhc--cCCCCCEE
Confidence 4799999999999987777899999999999999999988887654 899999999999964444687 89999999
Q ss_pred EccCCcccccCCCCCCCCccCcCCCCCCCEEEeecCcCcccCChhhccCCCCCCEEEccCCCCcccCCCCC---CCCceE
Q 042825 174 DLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNNLLQGPTPRFN---NSKLTV 250 (631)
Q Consensus 174 ~Ls~N~l~g~iP~~~~~~~~~~~~l~~L~~L~L~~N~l~g~iP~~~~~~l~~L~~L~ls~N~l~g~~p~~~---~~~~~~ 250 (631)
+|++|++++..|.. ++++++|++|+|++|++++..|.. ++.+++|++|++++|.+++..|... ......
T Consensus 103 ~L~~n~l~~~~~~~-------~~~l~~L~~L~Ls~n~l~~~~~~~-~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~ 174 (680)
T 1ziw_A 103 HLMSNSIQKIKNNP-------FVKQKNLITLDLSHNGLSSTKLGT-QVQLENLQELLLSNNKIQALKSEELDIFANSSLK 174 (680)
T ss_dssp ECCSSCCCCCCSCT-------TTTCTTCCEEECCSSCCSCCCCCS-SSCCTTCCEEECCSSCCCCBCHHHHGGGTTCEES
T ss_pred ECCCCccCccChhH-------ccccCCCCEEECCCCcccccCchh-hcccccCCEEEccCCcccccCHHHhhcccccccc
Confidence 99999998444444 458999999999999999877754 8899999999999999999877532 223455
Q ss_pred EeecCCCcccCCCCC
Q 042825 251 DMRTGSNCFCLDDPG 265 (631)
Q Consensus 251 ~l~~~~n~~~~~~~~ 265 (631)
.+++++|.+.+..|.
T Consensus 175 ~L~L~~n~l~~~~~~ 189 (680)
T 1ziw_A 175 KLELSSNQIKEFSPG 189 (680)
T ss_dssp EEECTTCCCCCBCTT
T ss_pred EEECCCCcccccChh
Confidence 677899988875543
|
| >2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C* | Back alignment and structure |
|---|
Probab=99.59 E-value=2.8e-15 Score=148.05 Aligned_cols=152 Identities=17% Similarity=0.192 Sum_probs=117.3
Q ss_pred CCeEEEEeCCCC-CcccCcchhcCCccCceeeccc-CcccCCCCcCcc---cccccccccccceecCCCCCCcCCCCCCc
Q 042825 97 GQVTNIELQDQN-RKGTVPPILKKLSSMAVMYLEN-NQLRGPIPSLVG---SLEFFSAYEANISGTIPDFIGTDTFPQLS 171 (631)
Q Consensus 97 ~~l~~l~l~~n~-l~g~ip~~~~~l~~L~~L~L~~-N~l~g~lP~~~~---~L~~L~l~~n~l~g~ip~~~~~~~l~~L~ 171 (631)
.+++.|+|++|. +++..+..|.++++|++|+|++ |++++..|..+. +|+.|++++|++++ +|. +. .+++|+
T Consensus 55 ~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~l~~n~l~~-lp~-~~--~l~~L~ 130 (239)
T 2xwt_C 55 PNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLGIFNTGLKM-FPD-LT--KVYSTD 130 (239)
T ss_dssp TTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEEEEEECCCS-CCC-CT--TCCBCC
T ss_pred CCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEeCCCCCCcc-ccc-cc--cccccc
Confidence 368899999997 7755555788999999999998 999854444443 78999999999986 776 65 677887
Q ss_pred ---EEEccCC-cccccCCCCCCCCccCcCCCCCCC-EEEeecCcCcccCChhhccCCCCCCEEEccCCC-CcccCCCCCC
Q 042825 172 ---YLDLGNN-NLQGTIPSSFGMPFADISNLSTLE-DLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNNL-LQGPTPRFNN 245 (631)
Q Consensus 172 ---~L~Ls~N-~l~g~iP~~~~~~~~~~~~l~~L~-~L~L~~N~l~g~iP~~~~~~l~~L~~L~ls~N~-l~g~~p~~~~ 245 (631)
+|+|++| +++ .+|... +.++++|+ +|+|++|+++ .+|...|.. ++|+.|+|++|. +++..+....
T Consensus 131 ~L~~L~l~~N~~l~-~i~~~~------~~~l~~L~~~L~l~~n~l~-~i~~~~~~~-~~L~~L~L~~n~~l~~i~~~~~~ 201 (239)
T 2xwt_C 131 IFFILEITDNPYMT-SIPVNA------FQGLCNETLTLKLYNNGFT-SVQGYAFNG-TKLDAVYLNKNKYLTVIDKDAFG 201 (239)
T ss_dssp SEEEEEEESCTTCC-EECTTT------TTTTBSSEEEEECCSCCCC-EECTTTTTT-CEEEEEECTTCTTCCEECTTTTT
T ss_pred cccEEECCCCcchh-hcCccc------ccchhcceeEEEcCCCCCc-ccCHhhcCC-CCCCEEEcCCCCCcccCCHHHhh
Confidence 9999999 888 555432 45889999 9999999998 788765555 789999999995 8877666433
Q ss_pred -C-CceEEeecCCCcccC
Q 042825 246 -S-KLTVDMRTGSNCFCL 261 (631)
Q Consensus 246 -~-~~~~~l~~~~n~~~~ 261 (631)
. .....+++++|.+..
T Consensus 202 ~l~~~L~~L~l~~N~l~~ 219 (239)
T 2xwt_C 202 GVYSGPSLLDVSQTSVTA 219 (239)
T ss_dssp TCSBCCSEEECTTCCCCC
T ss_pred ccccCCcEEECCCCcccc
Confidence 3 345567778998875
|
| >3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A} | Back alignment and structure |
|---|
Probab=99.59 E-value=2.5e-15 Score=166.63 Aligned_cols=126 Identities=21% Similarity=0.294 Sum_probs=59.3
Q ss_pred CeEEEEeCCCCCcccCcchhcCCccCceeecccCcccCCCCcCcccccccccccccceecCCCCCCcCCCCCCcEEEccC
Q 042825 98 QVTNIELQDQNRKGTVPPILKKLSSMAVMYLENNQLRGPIPSLVGSLEFFSAYEANISGTIPDFIGTDTFPQLSYLDLGN 177 (631)
Q Consensus 98 ~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~L~~N~l~g~lP~~~~~L~~L~l~~n~l~g~ip~~~~~~~l~~L~~L~Ls~ 177 (631)
+++.|+|++|.+++ +|. .+++|+.|+|++|+|++ +|..+.+|+.|++++|++++ +|. +. ++|+.|+|++
T Consensus 121 ~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~~l~~L~~L~Ls~N~L~~-lp~-l~----~~L~~L~Ls~ 189 (571)
T 3cvr_A 121 SLKHLDVDNNQLTM-LPE---LPALLEYINADNNQLTM-LPELPTSLEVLSVRNNQLTF-LPE-LP----ESLEALDVST 189 (571)
T ss_dssp TCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCCCCTTCCEEECCSSCCSC-CCC-CC----TTCCEEECCS
T ss_pred CCCEEECCCCcCCC-CCC---cCccccEEeCCCCccCc-CCCcCCCcCEEECCCCCCCC-cch-hh----CCCCEEECcC
Confidence 45555555555554 444 34555555555555553 44433455555555555554 444 32 4555555555
Q ss_pred CcccccCCCCCCCCccC-cCCCCCCCEEEeecCcCcccCChhhccCCCCCCEEEccCCCCcccCC
Q 042825 178 NNLQGTIPSSFGMPFAD-ISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNNLLQGPTP 241 (631)
Q Consensus 178 N~l~g~iP~~~~~~~~~-~~~l~~L~~L~L~~N~l~g~iP~~~~~~l~~L~~L~ls~N~l~g~~p 241 (631)
|+|+ .+|. ++. . ......|+.|+|++|+|+ .||.. +..+++|+.|+|++|.|++.+|
T Consensus 190 N~L~-~lp~-~~~---~L~~~~~~L~~L~Ls~N~l~-~lp~~-l~~l~~L~~L~L~~N~l~~~~p 247 (571)
T 3cvr_A 190 NLLE-SLPA-VPV---RNHHSEETEIFFRCRENRIT-HIPEN-ILSLDPTCTIILEDNPLSSRIR 247 (571)
T ss_dssp SCCS-SCCC-CC-----------CCEEEECCSSCCC-CCCGG-GGGSCTTEEEECCSSSCCHHHH
T ss_pred CCCC-chhh-HHH---hhhcccccceEEecCCCcce-ecCHH-HhcCCCCCEEEeeCCcCCCcCH
Confidence 5555 4544 320 0 000111155555555555 45543 3335555555555555555444
|
| >2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A | Back alignment and structure |
|---|
Probab=99.58 E-value=1.4e-15 Score=141.67 Aligned_cols=134 Identities=22% Similarity=0.281 Sum_probs=111.3
Q ss_pred CCeEEEEeCCCCCc-ccCcchhcCCccCceeecccCcccCCCCcCcc---cccccccccccceecCCCCCCcCCCCCCcE
Q 042825 97 GQVTNIELQDQNRK-GTVPPILKKLSSMAVMYLENNQLRGPIPSLVG---SLEFFSAYEANISGTIPDFIGTDTFPQLSY 172 (631)
Q Consensus 97 ~~l~~l~l~~n~l~-g~ip~~~~~l~~L~~L~L~~N~l~g~lP~~~~---~L~~L~l~~n~l~g~ip~~~~~~~l~~L~~ 172 (631)
.+++.|+|++|.++ |.+|..+..+++|++|+|++|.+++. ..+. +|+.|++++|++++.+|..+. .+++|++
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~--~l~~L~~ 99 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAE--KLPNLTH 99 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHH--HCTTCCE
T ss_pred ccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHh--hCCCCCE
Confidence 47899999999998 89999999999999999999999865 4333 899999999999987887766 6899999
Q ss_pred EEccCCcccccCCCCCCCCccCcCCCCCCCEEEeecCcCcccCCh---hhccCCCCCCEEEccCCCCcccCC
Q 042825 173 LDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPV---SSFNNHPKLTTLNLTNNLLQGPTP 241 (631)
Q Consensus 173 L~Ls~N~l~g~iP~~~~~~~~~~~~l~~L~~L~L~~N~l~g~iP~---~~~~~l~~L~~L~ls~N~l~g~~p 241 (631)
|+|++|+++ .+|.. ..+.++++|++|+|++|++++ +|. ..+..+++|++|++++|.+.....
T Consensus 100 L~Ls~N~l~-~~~~~-----~~l~~l~~L~~L~l~~N~l~~-~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~ 164 (168)
T 2ell_A 100 LNLSGNKLK-DISTL-----EPLKKLECLKSLDLFNCEVTN-LNDYRESVFKLLPQLTYLDGYDREDQEAPD 164 (168)
T ss_dssp EECBSSSCC-SSGGG-----GGGSSCSCCCEEECCSSGGGT-STTHHHHHHTTCSSCCEETTEETTSCBCCS
T ss_pred EeccCCccC-cchhH-----HHHhcCCCCCEEEeeCCcCcc-hHHHHHHHHHhCccCcEecCCCCChhhccc
Confidence 999999998 45410 125689999999999999994 554 348899999999999998876543
|
| >2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.57 E-value=8.5e-15 Score=139.84 Aligned_cols=125 Identities=25% Similarity=0.356 Sum_probs=88.1
Q ss_pred EEEEeCCCCCcccCcchhcCCccCceeecccCcccCCCCcCcc---cccccccccccceecCCCCCCcCCCCCCcEEEcc
Q 042825 100 TNIELQDQNRKGTVPPILKKLSSMAVMYLENNQLRGPIPSLVG---SLEFFSAYEANISGTIPDFIGTDTFPQLSYLDLG 176 (631)
Q Consensus 100 ~~l~l~~n~l~g~ip~~~~~l~~L~~L~L~~N~l~g~lP~~~~---~L~~L~l~~n~l~g~ip~~~~~~~l~~L~~L~Ls 176 (631)
+.+++++|+++ .+|..+. .+|++|+|++|+|+ .+|..+. +|+.|+|++|++++..|..|. .+++|++|+|+
T Consensus 13 ~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~--~l~~L~~L~Ls 86 (193)
T 2wfh_A 13 TVVRCSNKGLK-VLPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFS--NMTQLLTLILS 86 (193)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTT--TCTTCCEEECC
T ss_pred CEEEcCCCCCC-cCCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHcc--CCCCCCEEECC
Confidence 35677788877 6776553 57888899999887 6776554 677777777777766666666 67777777777
Q ss_pred CCcccccCCCCCCCCccCcCCCCCCCEEEeecCcCcccCChhhccCCCCCCEEEccCCCCcc
Q 042825 177 NNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNNLLQG 238 (631)
Q Consensus 177 ~N~l~g~iP~~~~~~~~~~~~l~~L~~L~L~~N~l~g~iP~~~~~~l~~L~~L~ls~N~l~g 238 (631)
+|+|++..|.. +.++++|++|+|++|+|+ .+|...|..+++|+.|+|++|.+..
T Consensus 87 ~N~l~~i~~~~-------f~~l~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~L~~N~~~C 140 (193)
T 2wfh_A 87 YNRLRCIPPRT-------FDGLKSLRLLSLHGNDIS-VVPEGAFNDLSALSHLAIGANPLYC 140 (193)
T ss_dssp SSCCCBCCTTT-------TTTCTTCCEEECCSSCCC-BCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred CCccCEeCHHH-------hCCCCCCCEEECCCCCCC-eeChhhhhcCccccEEEeCCCCeec
Confidence 77777433333 346777777777777777 4555557777777777777776654
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.57 E-value=2.5e-14 Score=155.31 Aligned_cols=205 Identities=15% Similarity=0.111 Sum_probs=123.2
Q ss_pred eecccceeehhhhcc--ccchhhhhhhhhhhccccccccccCCCCCCCChhhHHHHHHHHHhCCCCCCCCCCCCCCCCcc
Q 042825 12 QLFGFPRLTFRDCMT--ATSELEREKTERVQGDRRKKRRKIPSASSNQSRPDAAVMQDLKASFVIPKRLKWSDPDPCQWS 89 (631)
Q Consensus 12 ~~~~~~~~~~~~~~~--~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~k~~~~~~~~~~w~~~~~C~w~ 89 (631)
++-.++.+.+.++.. .+....+.+|+.|++++|++++. | ...... ++. ++- ..|...
T Consensus 40 ~l~~L~~L~Ls~n~l~~~~~l~~l~~L~~L~Ls~n~l~~~-~--~~~l~~--------L~~-------L~L---s~N~l~ 98 (457)
T 3bz5_A 40 QLATLTSLDCHNSSITDMTGIEKLTGLTKLICTSNNITTL-D--LSQNTN--------LTY-------LAC---DSNKLT 98 (457)
T ss_dssp HHTTCCEEECCSSCCCCCTTGGGCTTCSEEECCSSCCSCC-C--CTTCTT--------CSE-------EEC---CSSCCS
T ss_pred HcCCCCEEEccCCCcccChhhcccCCCCEEEccCCcCCeE-c--cccCCC--------CCE-------EEC---cCCCCc
Confidence 455566666655532 22334568899999999988852 3 111110 000 000 112222
Q ss_pred ceeeCCCCCeEEEEeCCCCCcccCcchhcCCccCceeecccCcccCCCC-cCcccccccccccccceecCCCCCCcCCCC
Q 042825 90 HVICSDDGQVTNIELQDQNRKGTVPPILKKLSSMAVMYLENNQLRGPIP-SLVGSLEFFSAYEANISGTIPDFIGTDTFP 168 (631)
Q Consensus 90 gv~C~~~~~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~L~~N~l~g~lP-~~~~~L~~L~l~~n~l~g~ip~~~~~~~l~ 168 (631)
++......+++.|+|++|.+++ +| ++++++|++|++++|+|++ +| ..+.+|+.|++++|+..+.++ ++ .++
T Consensus 99 ~~~~~~l~~L~~L~L~~N~l~~-l~--~~~l~~L~~L~l~~N~l~~-l~l~~l~~L~~L~l~~n~~~~~~~--~~--~l~ 170 (457)
T 3bz5_A 99 NLDVTPLTKLTYLNCDTNKLTK-LD--VSQNPLLTYLNCARNTLTE-IDVSHNTQLTELDCHLNKKITKLD--VT--PQT 170 (457)
T ss_dssp CCCCTTCTTCCEEECCSSCCSC-CC--CTTCTTCCEEECTTSCCSC-CCCTTCTTCCEEECTTCSCCCCCC--CT--TCT
T ss_pred eeecCCCCcCCEEECCCCcCCe-ec--CCCCCcCCEEECCCCccce-eccccCCcCCEEECCCCCcccccc--cc--cCC
Confidence 2222234577888888888876 44 7788888888888888876 33 223377778888886666663 44 677
Q ss_pred CCcEEEccCCcccccCCCCCCCCccCcCCCCCCCEEEeecCcCcccCChhhccCCCCCCEEEccCCCCcccCCCCCCCCc
Q 042825 169 QLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNNLLQGPTPRFNNSKL 248 (631)
Q Consensus 169 ~L~~L~Ls~N~l~g~iP~~~~~~~~~~~~l~~L~~L~L~~N~l~g~iP~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~~~ 248 (631)
+|+.|+|++|++++ +| + +++++|+.|+|++|++++ ++ ++.+++|+.|++++|++++ +| +.....
T Consensus 171 ~L~~L~ls~n~l~~-l~--l-------~~l~~L~~L~l~~N~l~~-~~---l~~l~~L~~L~Ls~N~l~~-ip-~~~l~~ 234 (457)
T 3bz5_A 171 QLTTLDCSFNKITE-LD--V-------SQNKLLNRLNCDTNNITK-LD---LNQNIQLTFLDCSSNKLTE-ID-VTPLTQ 234 (457)
T ss_dssp TCCEEECCSSCCCC-CC--C-------TTCTTCCEEECCSSCCSC-CC---CTTCTTCSEEECCSSCCSC-CC-CTTCTT
T ss_pred cCCEEECCCCccce-ec--c-------ccCCCCCEEECcCCcCCe-ec---cccCCCCCEEECcCCcccc-cC-ccccCC
Confidence 78888888888874 55 2 356667777777777664 33 5566667777777777766 34 333333
Q ss_pred eEEeecCCCcccC
Q 042825 249 TVDMRTGSNCFCL 261 (631)
Q Consensus 249 ~~~l~~~~n~~~~ 261 (631)
...+++++|.+++
T Consensus 235 L~~L~l~~N~l~~ 247 (457)
T 3bz5_A 235 LTYFDCSVNPLTE 247 (457)
T ss_dssp CSEEECCSSCCSC
T ss_pred CCEEEeeCCcCCC
Confidence 4445566666665
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=99.57 E-value=1e-15 Score=158.00 Aligned_cols=147 Identities=19% Similarity=0.124 Sum_probs=72.6
Q ss_pred CeEEEEeCCCCCcccCcchhcCCccCceeecccCcccCCCCcCcccccccccccccceecCCCCCCcCCCCCCcEEEccC
Q 042825 98 QVTNIELQDQNRKGTVPPILKKLSSMAVMYLENNQLRGPIPSLVGSLEFFSAYEANISGTIPDFIGTDTFPQLSYLDLGN 177 (631)
Q Consensus 98 ~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~L~~N~l~g~lP~~~~~L~~L~l~~n~l~g~ip~~~~~~~l~~L~~L~Ls~ 177 (631)
+++.|+|++|.+++ +| .+++|++|++++|++++..+..+.+|+.|++++|++++..|..++ .+++|++|+|++
T Consensus 81 ~L~~L~Ls~n~l~~-l~----~~~~L~~L~l~~n~l~~~~~~~~~~L~~L~l~~N~l~~~~~~~~~--~l~~L~~L~Ls~ 153 (317)
T 3o53_A 81 TLRTLDLNNNYVQE-LL----VGPSIETLHAANNNISRVSCSRGQGKKNIYLANNKITMLRDLDEG--CRSRVQYLDLKL 153 (317)
T ss_dssp TCCEEECCSSEEEE-EE----ECTTCCEEECCSSCCSEEEECCCSSCEEEECCSSCCCSGGGBCTG--GGSSEEEEECTT
T ss_pred CCCEEECcCCcccc-cc----CCCCcCEEECCCCccCCcCccccCCCCEEECCCCCCCCccchhhh--ccCCCCEEECCC
Confidence 44555555554442 11 124455555555555444344444555555555555554444444 455555555555
Q ss_pred CcccccCCCCCCCCccCcCCCCCCCEEEeecCcCcccCChhhccCCCCCCEEEccCCCCcccCCCCCCCCceEEeecCCC
Q 042825 178 NNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNNLLQGPTPRFNNSKLTVDMRTGSN 257 (631)
Q Consensus 178 N~l~g~iP~~~~~~~~~~~~l~~L~~L~L~~N~l~g~iP~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~~~~~~l~~~~n 257 (631)
|.+++..|..+ ..++++|++|+|++|++++ +|. ...+++|+.|+|++|.+++.++.+........+++++|
T Consensus 154 N~l~~~~~~~~------~~~l~~L~~L~L~~N~l~~-~~~--~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~L~~L~L~~N 224 (317)
T 3o53_A 154 NEIDTVNFAEL------AASSDTLEHLNLQYNFIYD-VKG--QVVFAKLKTLDLSSNKLAFMGPEFQSAAGVTWISLRNN 224 (317)
T ss_dssp SCCCEEEGGGG------GGGTTTCCEEECTTSCCCE-EEC--CCCCTTCCEEECCSSCCCEECGGGGGGTTCSEEECTTS
T ss_pred CCCCcccHHHH------hhccCcCCEEECCCCcCcc-ccc--ccccccCCEEECCCCcCCcchhhhcccCcccEEECcCC
Confidence 55554333222 1245556666666666553 332 22355566666666666555444333333344455555
Q ss_pred ccc
Q 042825 258 CFC 260 (631)
Q Consensus 258 ~~~ 260 (631)
.+.
T Consensus 225 ~l~ 227 (317)
T 3o53_A 225 KLV 227 (317)
T ss_dssp CCC
T ss_pred ccc
Confidence 554
|
| >1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 | Back alignment and structure |
|---|
Probab=99.56 E-value=5.9e-15 Score=151.76 Aligned_cols=146 Identities=21% Similarity=0.359 Sum_probs=97.8
Q ss_pred CCCeEEEEeCCCCCcccCcchhcCCccCceeecccCcccCCCCc--CcccccccccccccceecCCCCCCcCCCCCCcEE
Q 042825 96 DGQVTNIELQDQNRKGTVPPILKKLSSMAVMYLENNQLRGPIPS--LVGSLEFFSAYEANISGTIPDFIGTDTFPQLSYL 173 (631)
Q Consensus 96 ~~~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~L~~N~l~g~lP~--~~~~L~~L~l~~n~l~g~ip~~~~~~~l~~L~~L 173 (631)
..+++.|+|++|.+++ +| .+..+++|++|+|++|++++ +|. .+.+|+.|++++|++++..+ +. .+++|++|
T Consensus 84 l~~L~~L~L~~n~l~~-~~-~~~~l~~L~~L~l~~n~l~~-~~~l~~l~~L~~L~l~~n~l~~~~~--l~--~l~~L~~L 156 (308)
T 1h6u_A 84 LTKITELELSGNPLKN-VS-AIAGLQSIKTLDLTSTQITD-VTPLAGLSNLQVLYLDLNQITNISP--LA--GLTNLQYL 156 (308)
T ss_dssp CCSCCEEECCSCCCSC-CG-GGTTCTTCCEEECTTSCCCC-CGGGTTCTTCCEEECCSSCCCCCGG--GG--GCTTCCEE
T ss_pred CCCCCEEEccCCcCCC-ch-hhcCCCCCCEEECCCCCCCC-chhhcCCCCCCEEECCCCccCcCcc--cc--CCCCccEE
Confidence 3467777777777775 33 57777777777777777774 443 12377777777777775433 44 67777788
Q ss_pred EccCCcccccCCCCCCCCccCcCCCCCCCEEEeecCcCcccCChhhccCCCCCCEEEccCCCCcccCCCCCCCCceEEee
Q 042825 174 DLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNNLLQGPTPRFNNSKLTVDMR 253 (631)
Q Consensus 174 ~Ls~N~l~g~iP~~~~~~~~~~~~l~~L~~L~L~~N~l~g~iP~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~~~~~~l~ 253 (631)
+|++|+++ .+|. +.++++|+.|+|++|++++ +|. +..+++|+.|+|++|++++..| +........++
T Consensus 157 ~l~~n~l~-~~~~--------l~~l~~L~~L~l~~n~l~~-~~~--l~~l~~L~~L~L~~N~l~~~~~-l~~l~~L~~L~ 223 (308)
T 1h6u_A 157 SIGNAQVS-DLTP--------LANLSKLTTLKADDNKISD-ISP--LASLPNLIEVHLKNNQISDVSP-LANTSNLFIVT 223 (308)
T ss_dssp ECCSSCCC-CCGG--------GTTCTTCCEEECCSSCCCC-CGG--GGGCTTCCEEECTTSCCCBCGG-GTTCTTCCEEE
T ss_pred EccCCcCC-CChh--------hcCCCCCCEEECCCCccCc-Chh--hcCCCCCCEEEccCCccCcccc-ccCCCCCCEEE
Confidence 88877777 3442 3477778888888888774 442 6677778888888888777654 33344444556
Q ss_pred cCCCcccC
Q 042825 254 TGSNCFCL 261 (631)
Q Consensus 254 ~~~n~~~~ 261 (631)
+++|.+++
T Consensus 224 l~~N~i~~ 231 (308)
T 1h6u_A 224 LTNQTITN 231 (308)
T ss_dssp EEEEEEEC
T ss_pred ccCCeeec
Confidence 67777765
|
| >1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A | Back alignment and structure |
|---|
Probab=99.55 E-value=5.3e-15 Score=165.58 Aligned_cols=145 Identities=28% Similarity=0.370 Sum_probs=106.2
Q ss_pred CCeEEEEeCCCCCcccCcchhcCCccCceeecccCcccCCCCcC--cccccccccccccceecCCCCCCcCCCCCCcEEE
Q 042825 97 GQVTNIELQDQNRKGTVPPILKKLSSMAVMYLENNQLRGPIPSL--VGSLEFFSAYEANISGTIPDFIGTDTFPQLSYLD 174 (631)
Q Consensus 97 ~~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~L~~N~l~g~lP~~--~~~L~~L~l~~n~l~g~ip~~~~~~~l~~L~~L~ 174 (631)
.+|+.|+|++|.+++..| +..|++|+.|+|++|.|++ +|.. +.+|+.|+|++|++++ +| .+. .+++|+.|+
T Consensus 65 ~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~-l~~l~~l~~L~~L~Ls~N~l~~-l~-~l~--~l~~L~~L~ 137 (605)
T 1m9s_A 65 PNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIKD-LSSLKDLKKLKSLSLEHNGISD-IN-GLV--HLPQLESLY 137 (605)
T ss_dssp TTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCC-CTTSTTCTTCCEEECTTSCCCC-CG-GGG--GCTTCSEEE
T ss_pred CCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCCCCC-ChhhccCCCCCEEEecCCCCCC-Cc-ccc--CCCccCEEE
Confidence 467888888888886443 8888888888888888874 4432 2378888888888875 33 355 678888888
Q ss_pred ccCCcccccCCCCCCCCccCcCCCCCCCEEEeecCcCcccCChhhccCCCCCCEEEccCCCCcccCCCCCCCCceEEeec
Q 042825 175 LGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNNLLQGPTPRFNNSKLTVDMRT 254 (631)
Q Consensus 175 Ls~N~l~g~iP~~~~~~~~~~~~l~~L~~L~L~~N~l~g~iP~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~~~~~~l~~ 254 (631)
|++|+|++ ++ . ++++++|+.|+|++|+|++..| +..+++|+.|+|++|.|++. |.+..+..+..|++
T Consensus 138 Ls~N~l~~-l~-~-------l~~l~~L~~L~Ls~N~l~~~~~---l~~l~~L~~L~Ls~N~i~~l-~~l~~l~~L~~L~L 204 (605)
T 1m9s_A 138 LGNNKITD-IT-V-------LSRLTKLDTLSLEDNQISDIVP---LAGLTKLQNLYLSKNHISDL-RALAGLKNLDVLEL 204 (605)
T ss_dssp CCSSCCCC-CG-G-------GGSCTTCSEEECCSSCCCCCGG---GTTCTTCCEEECCSSCCCBC-GGGTTCTTCSEEEC
T ss_pred CCCCccCC-ch-h-------hcccCCCCEEECcCCcCCCchh---hccCCCCCEEECcCCCCCCC-hHHccCCCCCEEEc
Confidence 88888884 32 2 4578888888888888886544 67888888888888888874 55555555556677
Q ss_pred CCCcccC
Q 042825 255 GSNCFCL 261 (631)
Q Consensus 255 ~~n~~~~ 261 (631)
++|.+++
T Consensus 205 ~~N~l~~ 211 (605)
T 1m9s_A 205 FSQECLN 211 (605)
T ss_dssp CSEEEEC
T ss_pred cCCcCcC
Confidence 8888776
|
| >4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A* | Back alignment and structure |
|---|
Probab=99.55 E-value=8.3e-15 Score=165.15 Aligned_cols=177 Identities=19% Similarity=0.171 Sum_probs=137.9
Q ss_pred hhhhhhhccccccccccCCCCCCCChhhHHHHHHHHHhCCCCCCCCCCCCCCCCccceeeCCCCCeEEEEeCCCCCcccC
Q 042825 34 EKTERVQGDRRKKRRKIPSASSNQSRPDAAVMQDLKASFVIPKRLKWSDPDPCQWSHVICSDDGQVTNIELQDQNRKGTV 113 (631)
Q Consensus 34 ~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~k~~~~~~~~~~w~~~~~C~w~gv~C~~~~~l~~l~l~~n~l~g~i 113 (631)
.++++|+++.|++++..|.+.. ...+++.|+|++|.+++..
T Consensus 52 ~~~~~LdLs~N~i~~l~~~~f~---------------------------------------~l~~L~~L~Ls~N~i~~i~ 92 (635)
T 4g8a_A 52 FSTKNLDLSFNPLRHLGSYSFF---------------------------------------SFPELQVLDLSRCEIQTIE 92 (635)
T ss_dssp TTCCEEECTTSCCCEECTTTTT---------------------------------------TCTTCCEEECTTCCCCEEC
T ss_pred cCCCEEEeeCCCCCCCCHHHHh---------------------------------------CCCCCCEEECCCCcCCCcC
Confidence 5788999999999843333322 1247899999999999766
Q ss_pred cchhcCCccCceeecccCcccCCCCcCcc---cccccccccccceecCCCCCCcCCCCCCcEEEccCCcccc-cCCCCCC
Q 042825 114 PPILKKLSSMAVMYLENNQLRGPIPSLVG---SLEFFSAYEANISGTIPDFIGTDTFPQLSYLDLGNNNLQG-TIPSSFG 189 (631)
Q Consensus 114 p~~~~~l~~L~~L~L~~N~l~g~lP~~~~---~L~~L~l~~n~l~g~ip~~~~~~~l~~L~~L~Ls~N~l~g-~iP~~~~ 189 (631)
|..|.+|++|++|+|++|+|++..|..+. +|++|++++|++++..+..++ .+++|++|+|++|++++ .+|..
T Consensus 93 ~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~--~L~~L~~L~Ls~N~l~~~~~~~~-- 168 (635)
T 4g8a_A 93 DGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIG--HLKTLKELNVAHNLIQSFKLPEY-- 168 (635)
T ss_dssp TTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEECTTSCCCCSTTCCCT--TCTTCCEEECCSSCCCCCCCCGG--
T ss_pred hhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEECCCCcCCCCChhhhh--cCcccCeeccccCccccCCCchh--
Confidence 77899999999999999999964444444 899999999999976666788 89999999999999984 34443
Q ss_pred CCccCcCCCCCCCEEEeecCcCcccCChhhccCCCC----CCEEEccCCCCcccCCCCCCCCceEEeecCCCcc
Q 042825 190 MPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPK----LTTLNLTNNLLQGPTPRFNNSKLTVDMRTGSNCF 259 (631)
Q Consensus 190 ~~~~~~~~l~~L~~L~L~~N~l~g~iP~~~~~~l~~----L~~L~ls~N~l~g~~p~~~~~~~~~~l~~~~n~~ 259 (631)
++++++|++|+|++|++++..|.. +..+.+ +..++++.|.++...|..........+++.+|..
T Consensus 169 -----~~~l~~L~~L~L~~N~l~~~~~~~-l~~L~~l~~~~~~~~ls~n~l~~i~~~~~~~~~~~~l~l~~n~~ 236 (635)
T 4g8a_A 169 -----FSNLTNLEHLDLSSNKIQSIYCTD-LRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEIRLHKLTLRNNFD 236 (635)
T ss_dssp -----GGGCTTCCEEECCSSCCCEECGGG-GHHHHTCTTCCCEEECTTCCCCEECTTTTTTCEEEEEEEESCCS
T ss_pred -----hccchhhhhhcccCcccccccccc-ccchhhhhhhhhhhhcccCcccccCcccccchhhhhhhhhcccc
Confidence 568999999999999999765543 655443 3579999999999888766654455555566643
|
| >2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.55 E-value=2.3e-14 Score=150.72 Aligned_cols=159 Identities=22% Similarity=0.278 Sum_probs=126.8
Q ss_pred CCCccceeeCCCCCeEEEEeCCCCCcccCcchhcCCccCceeecccCcccCCCCcCc----ccccccccccccceecCCC
Q 042825 85 PCQWSHVICSDDGQVTNIELQDQNRKGTVPPILKKLSSMAVMYLENNQLRGPIPSLV----GSLEFFSAYEANISGTIPD 160 (631)
Q Consensus 85 ~C~w~gv~C~~~~~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~L~~N~l~g~lP~~~----~~L~~L~l~~n~l~g~ip~ 160 (631)
.|. ....|.. ..+++++++|+ .+|..+. ..|+.|+|++|+|++..+..+ .+|+.|+|++|++++..|.
T Consensus 11 ~Cp-~~C~C~~----~~l~c~~~~l~-~iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~ 82 (361)
T 2xot_A 11 SCP-ANCLCAS----NILSCSKQQLP-NVPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSE 82 (361)
T ss_dssp TCC-TTCEEET----TEEECCSSCCS-SCCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTT
T ss_pred CCC-CCCEECC----CEEEeCCCCcC-ccCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChh
Confidence 454 3456742 47899999999 5887664 358999999999997555543 4899999999999988778
Q ss_pred CCCcCCCCCCcEEEccCCcccccCCCCCCCCccCcCCCCCCCEEEeecCcCcccCChhhccCCCCCCEEEccCCCCcccC
Q 042825 161 FIGTDTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNNLLQGPT 240 (631)
Q Consensus 161 ~~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~~~~~~~~l~~L~~L~L~~N~l~g~iP~~~~~~l~~L~~L~ls~N~l~g~~ 240 (631)
.+. .+++|++|+|++|+|+ .+|... |.++++|++|+|++|++++..|. .|..+++|+.|+|++|+|++..
T Consensus 83 ~~~--~l~~L~~L~Ls~N~l~-~~~~~~------~~~l~~L~~L~L~~N~i~~~~~~-~~~~l~~L~~L~L~~N~l~~l~ 152 (361)
T 2xot_A 83 AFV--PVPNLRYLDLSSNHLH-TLDEFL------FSDLQALEVLLLYNNHIVVVDRN-AFEDMAQLQKLYLSQNQISRFP 152 (361)
T ss_dssp TTT--TCTTCCEEECCSSCCC-EECTTT------TTTCTTCCEEECCSSCCCEECTT-TTTTCTTCCEEECCSSCCCSCC
T ss_pred hcc--CCCCCCEEECCCCcCC-cCCHHH------hCCCcCCCEEECCCCcccEECHH-HhCCcccCCEEECCCCcCCeeC
Confidence 888 8999999999999999 455432 45899999999999999965564 5999999999999999999876
Q ss_pred CCCC----CCCceEEeecCCCcccC
Q 042825 241 PRFN----NSKLTVDMRTGSNCFCL 261 (631)
Q Consensus 241 p~~~----~~~~~~~l~~~~n~~~~ 261 (631)
+... .......+++++|.+..
T Consensus 153 ~~~~~~~~~l~~L~~L~L~~N~l~~ 177 (361)
T 2xot_A 153 VELIKDGNKLPKLMLLDLSSNKLKK 177 (361)
T ss_dssp GGGTC----CTTCCEEECCSSCCCC
T ss_pred HHHhcCcccCCcCCEEECCCCCCCc
Confidence 6543 23445567789999886
|
| >2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A | Back alignment and structure |
|---|
Probab=99.53 E-value=2.1e-15 Score=137.42 Aligned_cols=126 Identities=18% Similarity=0.284 Sum_probs=94.1
Q ss_pred CCeEEEEeCCCCCc-ccCcchhcCCccCceeecccCcccCCCCcCcc---cccccccccccceecCCCCCCcCCCCCCcE
Q 042825 97 GQVTNIELQDQNRK-GTVPPILKKLSSMAVMYLENNQLRGPIPSLVG---SLEFFSAYEANISGTIPDFIGTDTFPQLSY 172 (631)
Q Consensus 97 ~~l~~l~l~~n~l~-g~ip~~~~~l~~L~~L~L~~N~l~g~lP~~~~---~L~~L~l~~n~l~g~ip~~~~~~~l~~L~~ 172 (631)
.+++.|++++|.++ +.+|..+..+++|++|+|++|.+++. ..++ +|+.|++++|++++.+|..+. .+++|++
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~--~l~~L~~ 92 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAE--KCPNLTH 92 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHH--HCTTCCE
T ss_pred ccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhh--hCCCCCE
Confidence 46889999999998 88999889999999999999999864 3332 778888888888776776665 5778888
Q ss_pred EEccCCccccc-CCCCCCCCccCcCCCCCCCEEEeecCcCcccCC--hhhccCCCCCCEEEccC
Q 042825 173 LDLGNNNLQGT-IPSSFGMPFADISNLSTLEDLSLGHNKLTGIFP--VSSFNNHPKLTTLNLTN 233 (631)
Q Consensus 173 L~Ls~N~l~g~-iP~~~~~~~~~~~~l~~L~~L~L~~N~l~g~iP--~~~~~~l~~L~~L~ls~ 233 (631)
|+|++|++++. .|.. ++++++|++|+|++|++++..+ ...+..+++|+.|++++
T Consensus 93 L~ls~N~i~~~~~~~~-------~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~d 149 (149)
T 2je0_A 93 LNLSGNKIKDLSTIEP-------LKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGYD 149 (149)
T ss_dssp EECTTSCCCSHHHHGG-------GGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTBC
T ss_pred EECCCCcCCChHHHHH-------HhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCCC
Confidence 88888888741 2233 4577888888888888874333 13477778888887763
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.53 E-value=1.6e-14 Score=160.98 Aligned_cols=158 Identities=17% Similarity=0.161 Sum_probs=128.8
Q ss_pred CCeEEEEeCCCCCcccCcchhcCCccCceeecccCcccCCCCcCcc---cccccccccccceecCCCCCCcCCCCCCcEE
Q 042825 97 GQVTNIELQDQNRKGTVPPILKKLSSMAVMYLENNQLRGPIPSLVG---SLEFFSAYEANISGTIPDFIGTDTFPQLSYL 173 (631)
Q Consensus 97 ~~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~L~~N~l~g~lP~~~~---~L~~L~l~~n~l~g~ip~~~~~~~l~~L~~L 173 (631)
.+++.|+|++|.+++..+..|.++++|++|+|++|++++..|..+. +|++|++++|++++..|..++ .+++|++|
T Consensus 28 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~--~l~~L~~L 105 (570)
T 2z63_A 28 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFS--GLSSLQKL 105 (570)
T ss_dssp SSCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTT--TCTTCCEE
T ss_pred ccccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhc--Cccccccc
Confidence 3689999999999987788899999999999999999976666554 899999999999988788888 89999999
Q ss_pred EccCCcccccCCCCCCCCccCcCCCCCCCEEEeecCcCcc-cCChhhccCCCCCCEEEccCCCCcccCCCCCCC-Cc---
Q 042825 174 DLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTG-IFPVSSFNNHPKLTTLNLTNNLLQGPTPRFNNS-KL--- 248 (631)
Q Consensus 174 ~Ls~N~l~g~iP~~~~~~~~~~~~l~~L~~L~L~~N~l~g-~iP~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~-~~--- 248 (631)
+|++|+++ .+|.. .++++++|++|+|++|++++ .+|.. ++.+++|+.|++++|.+++..|..... ..
T Consensus 106 ~L~~n~l~-~l~~~------~~~~l~~L~~L~L~~n~l~~~~lp~~-~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~ 177 (570)
T 2z63_A 106 VAVETNLA-SLENF------PIGHLKTLKELNVAHNLIQSFKLPEY-FSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPL 177 (570)
T ss_dssp ECTTSCCC-CSTTC------SCTTCTTCCEEECCSSCCCCCCCCGG-GGGCTTCCEEECTTSCCCEECGGGGHHHHTCTT
T ss_pred cccccccc-cCCCc------cccccccccEEecCCCccceecChhh-hcccCCCCEEeCcCCccceecHHHccchhccch
Confidence 99999999 55542 15689999999999999986 57865 899999999999999999877653221 11
Q ss_pred -eEEeecCCCcccCCCC
Q 042825 249 -TVDMRTGSNCFCLDDP 264 (631)
Q Consensus 249 -~~~l~~~~n~~~~~~~ 264 (631)
...+++++|.+.+..+
T Consensus 178 ~~~~L~l~~n~l~~~~~ 194 (570)
T 2z63_A 178 LNLSLDLSLNPMNFIQP 194 (570)
T ss_dssp CCCEEECTTCCCCEECT
T ss_pred hhhhcccCCCCceecCH
Confidence 1356778888876444
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.52 E-value=4.2e-14 Score=153.49 Aligned_cols=216 Identities=13% Similarity=0.070 Sum_probs=147.7
Q ss_pred CCCCCCc-eecccceeehhhhcc-ccchhhhhhhhhhhccccccccccCCCCCCCChhhHHHHHHHHHhCCCCCCCCCCC
Q 042825 5 PWHPSNF-QLFGFPRLTFRDCMT-ATSELEREKTERVQGDRRKKRRKIPSASSNQSRPDAAVMQDLKASFVIPKRLKWSD 82 (631)
Q Consensus 5 ~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~k~~~~~~~~~~w~~ 82 (631)
..+| .| ++.+++.|.+.++.. ..+...+.+|+.|++++|.+++. + ...... ++.-. +
T Consensus 55 ~~~~-~l~~l~~L~~L~Ls~n~l~~~~~~~l~~L~~L~Ls~N~l~~~-~--~~~l~~--------L~~L~-----L---- 113 (457)
T 3bz5_A 55 TDMT-GIEKLTGLTKLICTSNNITTLDLSQNTNLTYLACDSNKLTNL-D--VTPLTK--------LTYLN-----C---- 113 (457)
T ss_dssp CCCT-TGGGCTTCSEEECCSSCCSCCCCTTCTTCSEEECCSSCCSCC-C--CTTCTT--------CCEEE-----C----
T ss_pred ccCh-hhcccCCCCEEEccCCcCCeEccccCCCCCEEECcCCCCcee-e--cCCCCc--------CCEEE-----C----
Confidence 3455 45 777888888877742 33355679999999999999863 2 211111 00000 0
Q ss_pred CCCCCccceeeCCCCCeEEEEeCCCCCcccCcchhcCCccCceeecccCcccCCCCc-CcccccccccccccceecCCCC
Q 042825 83 PDPCQWSHVICSDDGQVTNIELQDQNRKGTVPPILKKLSSMAVMYLENNQLRGPIPS-LVGSLEFFSAYEANISGTIPDF 161 (631)
Q Consensus 83 ~~~C~w~gv~C~~~~~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~L~~N~l~g~lP~-~~~~L~~L~l~~n~l~g~ip~~ 161 (631)
..|...++.-....+++.|++++|.+++ ++ ++++++|++|++++|++.+.++- .+.+|+.|++++|++++ +|
T Consensus 114 -~~N~l~~l~~~~l~~L~~L~l~~N~l~~-l~--l~~l~~L~~L~l~~n~~~~~~~~~~l~~L~~L~ls~n~l~~-l~-- 186 (457)
T 3bz5_A 114 -DTNKLTKLDVSQNPLLTYLNCARNTLTE-ID--VSHNTQLTELDCHLNKKITKLDVTPQTQLTTLDCSFNKITE-LD-- 186 (457)
T ss_dssp -CSSCCSCCCCTTCTTCCEEECTTSCCSC-CC--CTTCTTCCEEECTTCSCCCCCCCTTCTTCCEEECCSSCCCC-CC--
T ss_pred -CCCcCCeecCCCCCcCCEEECCCCccce-ec--cccCCcCCEEECCCCCcccccccccCCcCCEEECCCCccce-ec--
Confidence 1112222222234578999999999987 44 88899999999999976666642 23488999999999987 55
Q ss_pred CCcCCCCCCcEEEccCCcccccCCCCCCCCccCcCCCCCCCEEEeecCcCcccCChhhccCCCCCCEEEccCCCCcccCC
Q 042825 162 IGTDTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNNLLQGPTP 241 (631)
Q Consensus 162 ~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~~~~~~~~l~~L~~L~L~~N~l~g~iP~~~~~~l~~L~~L~ls~N~l~g~~p 241 (631)
++ .+++|+.|+|++|++++ ++ ++++++|++|+|++|++++ +| ++.+++|+.|++++|+|++..+
T Consensus 187 l~--~l~~L~~L~l~~N~l~~-~~---------l~~l~~L~~L~Ls~N~l~~-ip---~~~l~~L~~L~l~~N~l~~~~~ 250 (457)
T 3bz5_A 187 VS--QNKLLNRLNCDTNNITK-LD---------LNQNIQLTFLDCSSNKLTE-ID---VTPLTQLTYFDCSVNPLTELDV 250 (457)
T ss_dssp CT--TCTTCCEEECCSSCCSC-CC---------CTTCTTCSEEECCSSCCSC-CC---CTTCTTCSEEECCSSCCSCCCC
T ss_pred cc--cCCCCCEEECcCCcCCe-ec---------cccCCCCCEEECcCCcccc-cC---ccccCCCCEEEeeCCcCCCcCH
Confidence 55 78899999999999984 43 4578899999999999996 77 6788899999999999988765
Q ss_pred CCCCCCc--------eEEeecCCCcccCCCC
Q 042825 242 RFNNSKL--------TVDMRTGSNCFCLDDP 264 (631)
Q Consensus 242 ~~~~~~~--------~~~l~~~~n~~~~~~~ 264 (631)
....... ...+++++|.+.+.+|
T Consensus 251 ~~l~~L~~L~l~~n~L~~L~l~~n~~~~~~~ 281 (457)
T 3bz5_A 251 STLSKLTTLHCIQTDLLEIDLTHNTQLIYFQ 281 (457)
T ss_dssp TTCTTCCEEECTTCCCSCCCCTTCTTCCEEE
T ss_pred HHCCCCCEEeccCCCCCEEECCCCccCCccc
Confidence 4322211 1234556666665554
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} | Back alignment and structure |
|---|
Probab=99.51 E-value=2.4e-14 Score=149.34 Aligned_cols=213 Identities=18% Similarity=0.250 Sum_probs=111.3
Q ss_pred eecccceeehhhhcc--ccchhhhhhhhhhhccccccccccCCCCCCCChhhHHHHHHHHHhCCCCCCCCCCCCCCCCcc
Q 042825 12 QLFGFPRLTFRDCMT--ATSELEREKTERVQGDRRKKRRKIPSASSNQSRPDAAVMQDLKASFVIPKRLKWSDPDPCQWS 89 (631)
Q Consensus 12 ~~~~~~~~~~~~~~~--~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~k~~~~~~~~~~w~~~~~C~w~ 89 (631)
++.+++.+.+.++.. ..+....++|+.|++++|.....++. ...... ++. ++- ..|...
T Consensus 108 ~l~~L~~L~l~~n~i~~~~~~~~l~~L~~L~l~~n~~~~~~~~-~~~l~~--------L~~-------L~l---~~~~~~ 168 (347)
T 4fmz_A 108 NLTNLRELYLNEDNISDISPLANLTKMYSLNLGANHNLSDLSP-LSNMTG--------LNY-------LTV---TESKVK 168 (347)
T ss_dssp TCTTCSEEECTTSCCCCCGGGTTCTTCCEEECTTCTTCCCCGG-GTTCTT--------CCE-------EEC---CSSCCC
T ss_pred CCCcCCEEECcCCcccCchhhccCCceeEEECCCCCCcccccc-hhhCCC--------CcE-------EEe---cCCCcC
Confidence 677778887777642 22344678899999998865543332 111110 000 000 001111
Q ss_pred cee-eCCCCCeEEEEeCCCCCcccCcchhcCCccCceeecccCcccCCCC-cCcccccccccccccceecCCCCCCcCCC
Q 042825 90 HVI-CSDDGQVTNIELQDQNRKGTVPPILKKLSSMAVMYLENNQLRGPIP-SLVGSLEFFSAYEANISGTIPDFIGTDTF 167 (631)
Q Consensus 90 gv~-C~~~~~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~L~~N~l~g~lP-~~~~~L~~L~l~~n~l~g~ip~~~~~~~l 167 (631)
++. .....+++.|++++|.+.+ +++ +..+++|+.|++++|.+++..+ ..+.+|+.|++++|++++..+ +. .+
T Consensus 169 ~~~~~~~l~~L~~L~l~~n~l~~-~~~-~~~l~~L~~L~l~~n~l~~~~~~~~~~~L~~L~l~~n~l~~~~~--~~--~l 242 (347)
T 4fmz_A 169 DVTPIANLTDLYSLSLNYNQIED-ISP-LASLTSLHYFTAYVNQITDITPVANMTRLNSLKIGNNKITDLSP--LA--NL 242 (347)
T ss_dssp CCGGGGGCTTCSEEECTTSCCCC-CGG-GGGCTTCCEEECCSSCCCCCGGGGGCTTCCEEECCSSCCCCCGG--GT--TC
T ss_pred CchhhccCCCCCEEEccCCcccc-ccc-ccCCCccceeecccCCCCCCchhhcCCcCCEEEccCCccCCCcc--hh--cC
Confidence 110 0122456677777776663 333 6666666666666666664332 112266666666666664322 44 56
Q ss_pred CCCcEEEccCCcccccCCCCCCCCccCcCCCCCCCEEEeecCcCcccCChhhccCCCCCCEEEccCCCCcccCCCC-CCC
Q 042825 168 PQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNNLLQGPTPRF-NNS 246 (631)
Q Consensus 168 ~~L~~L~Ls~N~l~g~iP~~~~~~~~~~~~l~~L~~L~L~~N~l~g~iP~~~~~~l~~L~~L~ls~N~l~g~~p~~-~~~ 246 (631)
++|++|+|++|.++ .++ . +..+++|++|+|++|++++ +| .+..+++|+.|++++|.+++..|.. ...
T Consensus 243 ~~L~~L~l~~n~l~-~~~-~-------~~~l~~L~~L~l~~n~l~~-~~--~~~~l~~L~~L~L~~n~l~~~~~~~l~~l 310 (347)
T 4fmz_A 243 SQLTWLEIGTNQIS-DIN-A-------VKDLTKLKMLNVGSNQISD-IS--VLNNLSQLNSLFLNNNQLGNEDMEVIGGL 310 (347)
T ss_dssp TTCCEEECCSSCCC-CCG-G-------GTTCTTCCEEECCSSCCCC-CG--GGGGCTTCSEEECCSSCCCGGGHHHHHTC
T ss_pred CCCCEEECCCCccC-CCh-h-------HhcCCCcCEEEccCCccCC-Ch--hhcCCCCCCEEECcCCcCCCcChhHhhcc
Confidence 66666666666666 232 1 3355666666666666663 33 2555666666666666665554432 112
Q ss_pred CceEEeecCCCcccC
Q 042825 247 KLTVDMRTGSNCFCL 261 (631)
Q Consensus 247 ~~~~~l~~~~n~~~~ 261 (631)
.....+++++|.+.+
T Consensus 311 ~~L~~L~L~~n~l~~ 325 (347)
T 4fmz_A 311 TNLTTLFLSQNHITD 325 (347)
T ss_dssp TTCSEEECCSSSCCC
T ss_pred ccCCEEEccCCcccc
Confidence 223344456666554
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A | Back alignment and structure |
|---|
Probab=99.51 E-value=4.6e-14 Score=153.71 Aligned_cols=146 Identities=26% Similarity=0.327 Sum_probs=77.7
Q ss_pred CCeEEEEeCCCCCcccCcchhcCCccCceeecccCcccCCCC-cCcccccccccccccceecCCCCCCcCCCCCCcEEEc
Q 042825 97 GQVTNIELQDQNRKGTVPPILKKLSSMAVMYLENNQLRGPIP-SLVGSLEFFSAYEANISGTIPDFIGTDTFPQLSYLDL 175 (631)
Q Consensus 97 ~~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~L~~N~l~g~lP-~~~~~L~~L~l~~n~l~g~ip~~~~~~~l~~L~~L~L 175 (631)
.+++.|++++|.+++ + +.+..+++|++|++++|.+++..| ..+.+|+.|++++|++++..| +. .+++|+.|+|
T Consensus 221 ~~L~~L~l~~n~l~~-~-~~l~~l~~L~~L~l~~n~l~~~~~~~~l~~L~~L~l~~n~l~~~~~--~~--~l~~L~~L~L 294 (466)
T 1o6v_A 221 TNLDELSLNGNQLKD-I-GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISP--LA--GLTALTNLEL 294 (466)
T ss_dssp TTCCEEECCSSCCCC-C-GGGGGCTTCSEEECCSSCCCCCGGGTTCTTCSEEECCSSCCCCCGG--GT--TCTTCSEEEC
T ss_pred CCCCEEECCCCCccc-c-hhhhcCCCCCEEECCCCccccchhhhcCCCCCEEECCCCccCcccc--cc--CCCccCeEEc
Confidence 356666666666653 2 245566666666666666654333 112256666666666654332 33 5566666666
Q ss_pred cCCcccccCCCCCCCCccCcCCCCCCCEEEeecCcCcccCChhhccCCCCCCEEEccCCCCcccCCCCCCCCceEEeecC
Q 042825 176 GNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNNLLQGPTPRFNNSKLTVDMRTG 255 (631)
Q Consensus 176 s~N~l~g~iP~~~~~~~~~~~~l~~L~~L~L~~N~l~g~iP~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~~~~~~l~~~ 255 (631)
++|++++ +|+ ++++++|+.|+|++|++++..| +..+++|+.|++++|.+++. +.+..+.....++++
T Consensus 295 ~~n~l~~-~~~--------~~~l~~L~~L~L~~n~l~~~~~---~~~l~~L~~L~l~~n~l~~~-~~l~~l~~L~~L~l~ 361 (466)
T 1o6v_A 295 NENQLED-ISP--------ISNLKNLTYLTLYFNNISDISP---VSSLTKLQRLFFYNNKVSDV-SSLANLTNINWLSAG 361 (466)
T ss_dssp CSSCCSC-CGG--------GGGCTTCSEEECCSSCCSCCGG---GGGCTTCCEEECCSSCCCCC-GGGTTCTTCCEEECC
T ss_pred CCCcccC-chh--------hcCCCCCCEEECcCCcCCCchh---hccCccCCEeECCCCccCCc-hhhccCCCCCEEeCC
Confidence 6666653 221 2355666666666666664433 44555666666666666554 333333333444555
Q ss_pred CCcccC
Q 042825 256 SNCFCL 261 (631)
Q Consensus 256 ~n~~~~ 261 (631)
+|.+.+
T Consensus 362 ~n~l~~ 367 (466)
T 1o6v_A 362 HNQISD 367 (466)
T ss_dssp SSCCCB
T ss_pred CCccCc
Confidence 555554
|
| >3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=99.50 E-value=1.8e-13 Score=153.52 Aligned_cols=144 Identities=19% Similarity=0.299 Sum_probs=89.8
Q ss_pred CCeEEEEeCCCCCcccCcchhcCCccCceeecccCcccCCCCcCcccccccccccccceecCCCCCCcCCCCCCcEEEcc
Q 042825 97 GQVTNIELQDQNRKGTVPPILKKLSSMAVMYLENNQLRGPIPSLVGSLEFFSAYEANISGTIPDFIGTDTFPQLSYLDLG 176 (631)
Q Consensus 97 ~~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~L~~N~l~g~lP~~~~~L~~L~l~~n~l~g~ip~~~~~~~l~~L~~L~Ls 176 (631)
.+++.|+|++|.+++ +|.. +++|++|+|++|+|+ .+|..+.+|+.|++++|++++ +| . .+++|+.|+|+
T Consensus 121 ~~L~~L~L~~N~l~~-lp~~---l~~L~~L~Ls~N~l~-~l~~~~~~L~~L~L~~N~l~~-l~---~--~~~~L~~L~Ls 189 (622)
T 3g06_A 121 SGLCKLWIFGNQLTS-LPVL---PPGLQELSVSDNQLA-SLPALPSELCKLWAYNNQLTS-LP---M--LPSGLQELSVS 189 (622)
T ss_dssp TTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCS-CCCCCCTTCCEEECCSSCCSC-CC---C--CCTTCCEEECC
T ss_pred CCcCEEECCCCCCCc-CCCC---CCCCCEEECcCCcCC-CcCCccCCCCEEECCCCCCCC-Cc---c--cCCCCcEEECC
Confidence 467888888888874 6653 477888888888887 467666778888888888874 56 2 45788888888
Q ss_pred CCcccccCCCCCCC---------CccCc-CCCCCCCEEEeecCcCcccCChhhccCCCCCCEEEccCCCCcccCCCCCCC
Q 042825 177 NNNLQGTIPSSFGM---------PFADI-SNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNNLLQGPTPRFNNS 246 (631)
Q Consensus 177 ~N~l~g~iP~~~~~---------~~~~~-~~l~~L~~L~L~~N~l~g~iP~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~ 246 (631)
+|+|+ .+|..+.. .+..+ ..+++|+.|+|++|+|++ +| ..+++|+.|+|++|.|+.. |.. .
T Consensus 190 ~N~l~-~l~~~~~~L~~L~L~~N~l~~l~~~~~~L~~L~Ls~N~L~~-lp----~~l~~L~~L~Ls~N~L~~l-p~~--~ 260 (622)
T 3g06_A 190 DNQLA-SLPTLPSELYKLWAYNNRLTSLPALPSGLKELIVSGNRLTS-LP----VLPSELKELMVSGNRLTSL-PML--P 260 (622)
T ss_dssp SSCCS-CCCCCCTTCCEEECCSSCCSSCCCCCTTCCEEECCSSCCSC-CC----CCCTTCCEEECCSSCCSCC-CCC--C
T ss_pred CCCCC-CCCCccchhhEEECcCCcccccCCCCCCCCEEEccCCccCc-CC----CCCCcCcEEECCCCCCCcC-Ccc--c
Confidence 88888 46643210 00000 012556666666666663 55 2345666666666666643 321 1
Q ss_pred CceEEeecCCCccc
Q 042825 247 KLTVDMRTGSNCFC 260 (631)
Q Consensus 247 ~~~~~l~~~~n~~~ 260 (631)
.....+++++|.++
T Consensus 261 ~~L~~L~Ls~N~L~ 274 (622)
T 3g06_A 261 SGLLSLSVYRNQLT 274 (622)
T ss_dssp TTCCEEECCSSCCC
T ss_pred ccCcEEeCCCCCCC
Confidence 22333455666665
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A | Back alignment and structure |
|---|
Probab=99.50 E-value=5.6e-14 Score=152.97 Aligned_cols=211 Identities=19% Similarity=0.271 Sum_probs=154.9
Q ss_pred eecccceeehhhhcc--ccchhhhhhhhhhhccccccccccCCCCCCCChhhHHHHHHHHHhCCCCCCCCCCCCCCCCcc
Q 042825 12 QLFGFPRLTFRDCMT--ATSELEREKTERVQGDRRKKRRKIPSASSNQSRPDAAVMQDLKASFVIPKRLKWSDPDPCQWS 89 (631)
Q Consensus 12 ~~~~~~~~~~~~~~~--~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~k~~~~~~~~~~w~~~~~C~w~ 89 (631)
++.++..|.+.++.. ......+.+|+.|++++|.+++..|... .. .++. ++-+ .|...
T Consensus 175 ~l~~L~~L~l~~n~l~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~--l~--------~L~~-------L~l~---~n~l~ 234 (466)
T 1o6v_A 175 NLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGI--LT--------NLDE-------LSLN---GNQLK 234 (466)
T ss_dssp TCTTCCEEECCSSCCCCCGGGGGCTTCSEEECCSSCCCCCGGGGG--CT--------TCCE-------EECC---SSCCC
T ss_pred cCCCCCEEECcCCcCCCChhhccCCCCCEEEecCCcccccccccc--cC--------CCCE-------EECC---CCCcc
Confidence 566677777766642 2234467899999999999986554211 10 0000 0000 01111
Q ss_pred cee-eCCCCCeEEEEeCCCCCcccCcchhcCCccCceeecccCcccCCCC-cCcccccccccccccceecCCCCCCcCCC
Q 042825 90 HVI-CSDDGQVTNIELQDQNRKGTVPPILKKLSSMAVMYLENNQLRGPIP-SLVGSLEFFSAYEANISGTIPDFIGTDTF 167 (631)
Q Consensus 90 gv~-C~~~~~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~L~~N~l~g~lP-~~~~~L~~L~l~~n~l~g~ip~~~~~~~l 167 (631)
++. .....+++.|++++|.+++..| +..+++|+.|+|++|.+++..| ..+.+|+.|++++|++++..| ++ .+
T Consensus 235 ~~~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~~~~l~~L~~L~L~~n~l~~~~~--~~--~l 308 (466)
T 1o6v_A 235 DIGTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISP--IS--NL 308 (466)
T ss_dssp CCGGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCGGGTTCTTCSEEECCSSCCSCCGG--GG--GC
T ss_pred cchhhhcCCCCCEEECCCCccccchh--hhcCCCCCEEECCCCccCccccccCCCccCeEEcCCCcccCchh--hc--CC
Confidence 110 0123579999999999997554 8999999999999999996443 123389999999999997554 55 79
Q ss_pred CCCcEEEccCCcccccCCCCCCCCccCcCCCCCCCEEEeecCcCcccCChhhccCCCCCCEEEccCCCCcccCCCCCCCC
Q 042825 168 PQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNNLLQGPTPRFNNSK 247 (631)
Q Consensus 168 ~~L~~L~Ls~N~l~g~iP~~~~~~~~~~~~l~~L~~L~L~~N~l~g~iP~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~~ 247 (631)
++|+.|+|++|++++..| +..+++|+.|++++|++++. + .+..+++|+.|++++|++++.+| .....
T Consensus 309 ~~L~~L~L~~n~l~~~~~---------~~~l~~L~~L~l~~n~l~~~-~--~l~~l~~L~~L~l~~n~l~~~~~-~~~l~ 375 (466)
T 1o6v_A 309 KNLTYLTLYFNNISDISP---------VSSLTKLQRLFFYNNKVSDV-S--SLANLTNINWLSAGHNQISDLTP-LANLT 375 (466)
T ss_dssp TTCSEEECCSSCCSCCGG---------GGGCTTCCEEECCSSCCCCC-G--GGTTCTTCCEEECCSSCCCBCGG-GTTCT
T ss_pred CCCCEEECcCCcCCCchh---------hccCccCCEeECCCCccCCc-h--hhccCCCCCEEeCCCCccCccch-hhcCC
Confidence 999999999999996554 35899999999999999964 4 38899999999999999999988 55555
Q ss_pred ceEEeecCCCcccC
Q 042825 248 LTVDMRTGSNCFCL 261 (631)
Q Consensus 248 ~~~~l~~~~n~~~~ 261 (631)
....+++++|.+++
T Consensus 376 ~L~~L~l~~n~~~~ 389 (466)
T 1o6v_A 376 RITQLGLNDQAWTN 389 (466)
T ss_dssp TCCEEECCCEEEEC
T ss_pred CCCEEeccCCcccC
Confidence 56677889999987
|
| >2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.49 E-value=1.1e-13 Score=132.05 Aligned_cols=125 Identities=22% Similarity=0.291 Sum_probs=104.9
Q ss_pred ceeecccCcccCCCCcCcc-cccccccccccceecCCCCCCcCCCCCCcEEEccCCcccccCCCCCCCCccCcCCCCCCC
Q 042825 124 AVMYLENNQLRGPIPSLVG-SLEFFSAYEANISGTIPDFIGTDTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLE 202 (631)
Q Consensus 124 ~~L~L~~N~l~g~lP~~~~-~L~~L~l~~n~l~g~ip~~~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~~~~~~~~l~~L~ 202 (631)
+++++++|.|+ .+|..+. +|+.|++++|+++ .+|..+. .+++|+.|+|++|++++..|.. |.++++|+
T Consensus 13 ~~l~~~~~~l~-~ip~~~~~~l~~L~L~~n~i~-~ip~~~~--~l~~L~~L~Ls~N~i~~i~~~~-------f~~l~~L~ 81 (193)
T 2wfh_A 13 TVVRCSNKGLK-VLPKGIPRDVTELYLDGNQFT-LVPKELS--NYKHLTLIDLSNNRISTLSNQS-------FSNMTQLL 81 (193)
T ss_dssp TEEECTTSCCS-SCCSCCCTTCCEEECCSSCCC-SCCGGGG--GCTTCCEEECCSSCCCCCCTTT-------TTTCTTCC
T ss_pred CEEEcCCCCCC-cCCCCCCCCCCEEECCCCcCc-hhHHHhh--cccCCCEEECCCCcCCEeCHhH-------ccCCCCCC
Confidence 67999999998 7887665 9999999999998 7888887 8999999999999999544434 45899999
Q ss_pred EEEeecCcCcccCChhhccCCCCCCEEEccCCCCcccCCCCC-CCCceEEeecCCCccc
Q 042825 203 DLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNNLLQGPTPRFN-NSKLTVDMRTGSNCFC 260 (631)
Q Consensus 203 ~L~L~~N~l~g~iP~~~~~~l~~L~~L~ls~N~l~g~~p~~~-~~~~~~~l~~~~n~~~ 260 (631)
+|+|++|+|++..| ..|..+++|++|+|++|.|++..+... .......+++++|.+.
T Consensus 82 ~L~Ls~N~l~~i~~-~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 139 (193)
T 2wfh_A 82 TLILSYNRLRCIPP-RTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLY 139 (193)
T ss_dssp EEECCSSCCCBCCT-TTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEE
T ss_pred EEECCCCccCEeCH-HHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCee
Confidence 99999999996544 459999999999999999998877643 3445556778999875
|
| >3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=99.49 E-value=9.6e-14 Score=155.67 Aligned_cols=139 Identities=20% Similarity=0.272 Sum_probs=100.6
Q ss_pred CeEEEEeCCCCCcccCcchhcCCccCceeecccCcccCCCCcCcccccccccccccceecCCCCCCcCCCCCCcEEEccC
Q 042825 98 QVTNIELQDQNRKGTVPPILKKLSSMAVMYLENNQLRGPIPSLVGSLEFFSAYEANISGTIPDFIGTDTFPQLSYLDLGN 177 (631)
Q Consensus 98 ~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~L~~N~l~g~lP~~~~~L~~L~l~~n~l~g~ip~~~~~~~l~~L~~L~Ls~ 177 (631)
+++.|++++|.+++ +| ..+++|+.|+|++|+|+ .+|..+.+|+.|++++|+++ .+|. .+++|+.|+|++
T Consensus 162 ~L~~L~L~~N~l~~-l~---~~~~~L~~L~Ls~N~l~-~l~~~~~~L~~L~L~~N~l~-~l~~-----~~~~L~~L~Ls~ 230 (622)
T 3g06_A 162 ELCKLWAYNNQLTS-LP---MLPSGLQELSVSDNQLA-SLPTLPSELYKLWAYNNRLT-SLPA-----LPSGLKELIVSG 230 (622)
T ss_dssp TCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCS-CCCCCCTTCCEEECCSSCCS-SCCC-----CCTTCCEEECCS
T ss_pred CCCEEECCCCCCCC-Cc---ccCCCCcEEECCCCCCC-CCCCccchhhEEECcCCccc-ccCC-----CCCCCCEEEccC
Confidence 45555555555553 44 33477778888888877 46666677888888888777 4554 246899999999
Q ss_pred CcccccCCCCCCCCccCcCCCCCCCEEEeecCcCcccCChhhccCCCCCCEEEccCCCCcccCCCCCCCCceEEeecCCC
Q 042825 178 NNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNNLLQGPTPRFNNSKLTVDMRTGSN 257 (631)
Q Consensus 178 N~l~g~iP~~~~~~~~~~~~l~~L~~L~L~~N~l~g~iP~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~~~~~~l~~~~n 257 (631)
|+|+ .+|. .+++|+.|+|++|+|+ .+|. .+++|+.|+|++|+|+..++.+..+.....+++++|
T Consensus 231 N~L~-~lp~----------~l~~L~~L~Ls~N~L~-~lp~----~~~~L~~L~Ls~N~L~~lp~~l~~l~~L~~L~L~~N 294 (622)
T 3g06_A 231 NRLT-SLPV----------LPSELKELMVSGNRLT-SLPM----LPSGLLSLSVYRNQLTRLPESLIHLSSETTVNLEGN 294 (622)
T ss_dssp SCCS-CCCC----------CCTTCCEEECCSSCCS-CCCC----CCTTCCEEECCSSCCCSCCGGGGGSCTTCEEECCSC
T ss_pred CccC-cCCC----------CCCcCcEEECCCCCCC-cCCc----ccccCcEEeCCCCCCCcCCHHHhhccccCEEEecCC
Confidence 9998 4772 4689999999999999 6884 578999999999999944333444444556778999
Q ss_pred cccCCC
Q 042825 258 CFCLDD 263 (631)
Q Consensus 258 ~~~~~~ 263 (631)
.+++..
T Consensus 295 ~l~~~~ 300 (622)
T 3g06_A 295 PLSERT 300 (622)
T ss_dssp CCCHHH
T ss_pred CCCCcC
Confidence 988743
|
| >3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D | Back alignment and structure |
|---|
Probab=99.48 E-value=1e-13 Score=129.37 Aligned_cols=90 Identities=30% Similarity=0.483 Sum_probs=68.9
Q ss_pred cccccccccccceecCCCCCCcCCCCCCcEEEccCCcccccCCCCCCCCccCcCCCCCCCEEEeecCcCcccCChhhccC
Q 042825 143 SLEFFSAYEANISGTIPDFIGTDTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNN 222 (631)
Q Consensus 143 ~L~~L~l~~n~l~g~ip~~~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~~~~~~~~l~~L~~L~L~~N~l~g~iP~~~~~~ 222 (631)
+|+.|+|++|++++..|..+. .+++|++|+|++|+|+ .+|+.. +.++++|++|+|++|+|++ +|...|..
T Consensus 31 ~l~~L~L~~N~i~~~~~~~~~--~l~~L~~L~Ls~N~l~-~l~~~~------f~~l~~L~~L~L~~N~l~~-~~~~~~~~ 100 (170)
T 3g39_A 31 TTQVLYLYDNQITKLEPGVFD--RLTQLTRLDLDNNQLT-VLPAGV------FDKLTQLTQLSLNDNQLKS-IPRGAFDN 100 (170)
T ss_dssp TCSEEECCSSCCCCCCTTTTT--TCTTCSEEECCSSCCC-CCCTTT------TTTCTTCCEEECCSSCCCC-CCTTTTTT
T ss_pred CCcEEEcCCCcCCccChhhhc--CcccCCEEECCCCCcC-ccChhh------ccCCCCCCEEECCCCccCE-eCHHHhcC
Confidence 444444444444445566677 7899999999999999 566543 4589999999999999995 55555889
Q ss_pred CCCCCEEEccCCCCcccCCC
Q 042825 223 HPKLTTLNLTNNLLQGPTPR 242 (631)
Q Consensus 223 l~~L~~L~ls~N~l~g~~p~ 242 (631)
+++|++|+|++|.++...+.
T Consensus 101 l~~L~~L~L~~N~~~c~c~~ 120 (170)
T 3g39_A 101 LKSLTHIWLLNNPWDCACSD 120 (170)
T ss_dssp CTTCCEEECCSSCBCTTBGG
T ss_pred CCCCCEEEeCCCCCCCCchh
Confidence 99999999999999877653
|
| >1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A* | Back alignment and structure |
|---|
Probab=99.48 E-value=1.5e-15 Score=168.97 Aligned_cols=152 Identities=20% Similarity=0.248 Sum_probs=123.5
Q ss_pred CCeEEEEeCCCCCcccCcchhcCCccCceeecccCc-------------ccCCCCcCcc---------------------
Q 042825 97 GQVTNIELQDQNRKGTVPPILKKLSSMAVMYLENNQ-------------LRGPIPSLVG--------------------- 142 (631)
Q Consensus 97 ~~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~L~~N~-------------l~g~lP~~~~--------------------- 142 (631)
..++.|+|++|.++ .+|+++++|++|+.|++++|. +.|.+|..++
T Consensus 349 ~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~~~L~~ 427 (567)
T 1dce_A 349 EQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYLDDLRS 427 (567)
T ss_dssp TTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHHHHHHH
T ss_pred ccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhcccchhhh
Confidence 35667888999887 899999999999999998775 4444443221
Q ss_pred --------------cccccccccccceecCCCCCCcCCCCCCcEEEccCCcccccCCCCCCCCccCcCCCCCCCEEEeec
Q 042825 143 --------------SLEFFSAYEANISGTIPDFIGTDTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGH 208 (631)
Q Consensus 143 --------------~L~~L~l~~n~l~g~ip~~~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~~~~~~~~l~~L~~L~L~~ 208 (631)
.|+.|+|++|++++ +|. ++ .+++|+.|+|++|+|+ .+|..+ +++++|+.|+|++
T Consensus 428 l~l~~n~i~~l~~~~L~~L~Ls~n~l~~-lp~-~~--~l~~L~~L~Ls~N~l~-~lp~~~-------~~l~~L~~L~Ls~ 495 (567)
T 1dce_A 428 KFLLENSVLKMEYADVRVLHLAHKDLTV-LCH-LE--QLLLVTHLDLSHNRLR-ALPPAL-------AALRCLEVLQASD 495 (567)
T ss_dssp HHHHHHHHHHHHHTTCSEEECTTSCCSS-CCC-GG--GGTTCCEEECCSSCCC-CCCGGG-------GGCTTCCEEECCS
T ss_pred hhhhcccccccCccCceEEEecCCCCCC-CcC-cc--ccccCcEeecCccccc-ccchhh-------hcCCCCCEEECCC
Confidence 36678999999986 786 77 8999999999999999 888764 5899999999999
Q ss_pred CcCcccCChhhccCCCCCCEEEccCCCCcccC-CC-CCCCCceEEeecCCCcccCCCC
Q 042825 209 NKLTGIFPVSSFNNHPKLTTLNLTNNLLQGPT-PR-FNNSKLTVDMRTGSNCFCLDDP 264 (631)
Q Consensus 209 N~l~g~iP~~~~~~l~~L~~L~ls~N~l~g~~-p~-~~~~~~~~~l~~~~n~~~~~~~ 264 (631)
|+|++ +| . ++.+++|+.|+|++|+|++.+ |. +..+..+..+++++|.+++..+
T Consensus 496 N~l~~-lp-~-l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~ 550 (567)
T 1dce_A 496 NALEN-VD-G-VANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEG 550 (567)
T ss_dssp SCCCC-CG-G-GTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSS
T ss_pred CCCCC-Cc-c-cCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCcc
Confidence 99996 78 4 899999999999999999985 55 4444555667889999998544
|
| >1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.48 E-value=1e-13 Score=139.08 Aligned_cols=144 Identities=22% Similarity=0.232 Sum_probs=95.2
Q ss_pred CeEEEEeCCCCCcccCcchhcCCccCceeecccCcccCCCC-cCcccccccccccccceecCCCCCCcCCCCCCcEEEcc
Q 042825 98 QVTNIELQDQNRKGTVPPILKKLSSMAVMYLENNQLRGPIP-SLVGSLEFFSAYEANISGTIPDFIGTDTFPQLSYLDLG 176 (631)
Q Consensus 98 ~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~L~~N~l~g~lP-~~~~~L~~L~l~~n~l~g~ip~~~~~~~l~~L~~L~Ls 176 (631)
+++.|++++|+++ .+| .+..+++|++|+|++|+|++..| ..+.+|+.|++++|++++ +|.. . . ++|+.|+|+
T Consensus 42 ~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~L~~N~i~~~~~l~~l~~L~~L~L~~N~l~~-l~~~-~--~-~~L~~L~L~ 114 (263)
T 1xeu_A 42 GVQNFNGDNSNIQ-SLA-GMQFFTNLKELHLSHNQISDLSPLKDLTKLEELSVNRNRLKN-LNGI-P--S-ACLSRLFLD 114 (263)
T ss_dssp TCSEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCCGGGTTCSSCCEEECCSSCCSC-CTTC-C--C-SSCCEEECC
T ss_pred cCcEEECcCCCcc-cch-HHhhCCCCCEEECCCCccCCChhhccCCCCCEEECCCCccCC-cCcc-c--c-CcccEEEcc
Confidence 5677777777776 455 57777777777777777774332 112267777777777775 4432 2 2 677788888
Q ss_pred CCcccccCCCCCCCCccCcCCCCCCCEEEeecCcCcccCChhhccCCCCCCEEEccCCCCcccCCCCCCCCceEEeecCC
Q 042825 177 NNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNNLLQGPTPRFNNSKLTVDMRTGS 256 (631)
Q Consensus 177 ~N~l~g~iP~~~~~~~~~~~~l~~L~~L~L~~N~l~g~iP~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~~~~~~l~~~~ 256 (631)
+|++++ +| . +.++++|+.|+|++|++++ +| . +..+++|+.|+|++|.+++. +.+........+++++
T Consensus 115 ~N~l~~-~~-~-------l~~l~~L~~L~Ls~N~i~~-~~-~-l~~l~~L~~L~L~~N~i~~~-~~l~~l~~L~~L~l~~ 181 (263)
T 1xeu_A 115 NNELRD-TD-S-------LIHLKNLEILSIRNNKLKS-IV-M-LGFLSKLEVLDLHGNEITNT-GGLTRLKKVNWIDLTG 181 (263)
T ss_dssp SSCCSB-SG-G-------GTTCTTCCEEECTTSCCCB-CG-G-GGGCTTCCEEECTTSCCCBC-TTSTTCCCCCEEEEEE
T ss_pred CCccCC-Ch-h-------hcCcccccEEECCCCcCCC-Ch-H-HccCCCCCEEECCCCcCcch-HHhccCCCCCEEeCCC
Confidence 887773 43 1 4477777888888887774 44 2 67777788888888877776 4444444444556677
Q ss_pred CcccC
Q 042825 257 NCFCL 261 (631)
Q Consensus 257 n~~~~ 261 (631)
|.++.
T Consensus 182 N~~~~ 186 (263)
T 1xeu_A 182 QKCVN 186 (263)
T ss_dssp EEEEC
T ss_pred CcccC
Confidence 77665
|
| >4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C} | Back alignment and structure |
|---|
Probab=99.48 E-value=5.5e-15 Score=169.42 Aligned_cols=135 Identities=21% Similarity=0.321 Sum_probs=118.4
Q ss_pred CCCeEEEEeCCCCCcccCcchhcCCccCceeecccCcccCCCCcCcc---cccccccccccceecCCCCCCcCCCCCCcE
Q 042825 96 DGQVTNIELQDQNRKGTVPPILKKLSSMAVMYLENNQLRGPIPSLVG---SLEFFSAYEANISGTIPDFIGTDTFPQLSY 172 (631)
Q Consensus 96 ~~~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~L~~N~l~g~lP~~~~---~L~~L~l~~n~l~g~ip~~~~~~~l~~L~~ 172 (631)
...++.|+|++|.+. .+|+.+++|++|++|+|++|.|+ .+|..++ +|+.|+|++|+|+ .+|..++ .|++|++
T Consensus 223 l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~--~l~~L~~ 297 (727)
T 4b8c_D 223 DQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELG--SCFQLKY 297 (727)
T ss_dssp CCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGG--GGTTCSE
T ss_pred CCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhc--CCCCCCE
Confidence 457999999999999 89999999999999999999999 8998766 8999999999999 8999998 8999999
Q ss_pred EEccCCcccccCCCCCCCCccCcCCCCCCCEEEeecCcCcccCChhhccCCC-CCCEEEccCCCCcccCCCCC
Q 042825 173 LDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHP-KLTTLNLTNNLLQGPTPRFN 244 (631)
Q Consensus 173 L~Ls~N~l~g~iP~~~~~~~~~~~~l~~L~~L~L~~N~l~g~iP~~~~~~l~-~L~~L~ls~N~l~g~~p~~~ 244 (631)
|+|++|.|+ .||..+ ++|++|++|+|++|+|+|.+|.. +..+. .+..|+|++|.++|.+|...
T Consensus 298 L~L~~N~l~-~lp~~~-------~~l~~L~~L~L~~N~l~~~~p~~-~~~~~~~~~~l~l~~N~l~~~~p~~l 361 (727)
T 4b8c_D 298 FYFFDNMVT-TLPWEF-------GNLCNLQFLGVEGNPLEKQFLKI-LTEKSVTGLIFYLRDNRPEIPLPHER 361 (727)
T ss_dssp EECCSSCCC-CCCSST-------TSCTTCCCEECTTSCCCSHHHHH-HHHHHHHHHHHHHHHCCCCCCCCCC-
T ss_pred EECCCCCCC-ccChhh-------hcCCCccEEeCCCCccCCCChHH-HhhcchhhhHHhhccCcccCcCcccc
Confidence 999999998 899765 49999999999999999988865 54432 23357899999999999754
|
| >2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A | Back alignment and structure |
|---|
Probab=99.48 E-value=5.8e-14 Score=130.59 Aligned_cols=132 Identities=20% Similarity=0.255 Sum_probs=107.2
Q ss_pred cCCccCceeecccCccc-CCCCcCcc---cccccccccccceecCCCCCCcCCCCCCcEEEccCCcccccCCCCCCCCcc
Q 042825 118 KKLSSMAVMYLENNQLR-GPIPSLVG---SLEFFSAYEANISGTIPDFIGTDTFPQLSYLDLGNNNLQGTIPSSFGMPFA 193 (631)
Q Consensus 118 ~~l~~L~~L~L~~N~l~-g~lP~~~~---~L~~L~l~~n~l~g~ip~~~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~~~~ 193 (631)
...++|+.|+|++|.++ +.+|..+. +|+.|++++|++++. ..+. .+++|++|+|++|++++.+|..
T Consensus 21 ~~~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~--~l~~L~~L~Ls~N~l~~~~~~~------ 90 (168)
T 2ell_A 21 RTPAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLP--KLPKLKKLELSENRIFGGLDML------ 90 (168)
T ss_dssp SCTTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCC--CCSSCCEEEEESCCCCSCCCHH------
T ss_pred CCcccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhc--cCCCCCEEECcCCcCchHHHHH------
Confidence 34478999999999998 88998754 899999999999875 6676 7999999999999999766644
Q ss_pred CcCCCCCCCEEEeecCcCcccCCh-hhccCCCCCCEEEccCCCCcccCC----CCCCCCceEEeecCCCcccC
Q 042825 194 DISNLSTLEDLSLGHNKLTGIFPV-SSFNNHPKLTTLNLTNNLLQGPTP----RFNNSKLTVDMRTGSNCFCL 261 (631)
Q Consensus 194 ~~~~l~~L~~L~L~~N~l~g~iP~-~~~~~l~~L~~L~ls~N~l~g~~p----~~~~~~~~~~l~~~~n~~~~ 261 (631)
+.++++|++|+|++|++++ +|. ..+..+++|+.|++++|.+++..+ .+........+++++|.+..
T Consensus 91 -~~~l~~L~~L~Ls~N~l~~-~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~~ 161 (168)
T 2ell_A 91 -AEKLPNLTHLNLSGNKLKD-ISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQE 161 (168)
T ss_dssp -HHHCTTCCEEECBSSSCCS-SGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSCB
T ss_pred -HhhCCCCCEEeccCCccCc-chhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChhh
Confidence 3469999999999999995 442 348899999999999999998877 34444455566677776654
|
| >2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.47 E-value=3.4e-13 Score=126.58 Aligned_cols=129 Identities=19% Similarity=0.255 Sum_probs=105.8
Q ss_pred CceeecccCcccCCCCcCcc-cccccccccccceecCCCCCCcCCCCCCcEEEccCCcccccCCCCCCCCccCcCCCCCC
Q 042825 123 MAVMYLENNQLRGPIPSLVG-SLEFFSAYEANISGTIPDFIGTDTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTL 201 (631)
Q Consensus 123 L~~L~L~~N~l~g~lP~~~~-~L~~L~l~~n~l~g~ip~~~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~~~~~~~~l~~L 201 (631)
.+.+++++|+++ .+|..+. +|+.|++++|++++..+..+. .+++|++|+|++|+++ .+|... ++++++|
T Consensus 9 ~~~l~~~~~~l~-~~p~~~~~~l~~L~l~~n~l~~~~~~~~~--~l~~L~~L~l~~n~l~-~~~~~~------~~~l~~L 78 (177)
T 2o6r_A 9 GTEIRCNSKGLT-SVPTGIPSSATRLELESNKLQSLPHGVFD--KLTQLTKLSLSQNQIQ-SLPDGV------FDKLTKL 78 (177)
T ss_dssp TTEEECCSSCCS-SCCTTCCTTCSEEECCSSCCCCCCTTTTT--TCTTCSEEECCSSCCC-CCCTTT------TTTCTTC
T ss_pred CCEEEecCCCCc-cCCCCCCCCCcEEEeCCCcccEeCHHHhc--CcccccEEECCCCcce-EeChhH------ccCCCcc
Confidence 578999999998 6776554 999999999999976666667 8999999999999999 555432 4589999
Q ss_pred CEEEeecCcCcccCChhhccCCCCCCEEEccCCCCcccCCCCCC-CCceEEeecCCCcccCC
Q 042825 202 EDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNNLLQGPTPRFNN-SKLTVDMRTGSNCFCLD 262 (631)
Q Consensus 202 ~~L~L~~N~l~g~iP~~~~~~l~~L~~L~ls~N~l~g~~p~~~~-~~~~~~l~~~~n~~~~~ 262 (631)
++|+|++|++++ +|...+..+++|++|+|++|.|++.++.... ......+++++|.+.+.
T Consensus 79 ~~L~l~~N~l~~-~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~ 139 (177)
T 2o6r_A 79 TILYLHENKLQS-LPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCS 139 (177)
T ss_dssp CEEECCSSCCCC-CCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCC
T ss_pred CEEECCCCCccc-cCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeecc
Confidence 999999999995 5545588999999999999999987776533 44455677899998763
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.47 E-value=4.2e-14 Score=135.33 Aligned_cols=127 Identities=16% Similarity=0.280 Sum_probs=106.8
Q ss_pred CCeEEEEeCCCCCcccCcchhcCCccCceeecccCcccCCCCcCcc---cccccccccccceecCCCCCCcCCCCCCcEE
Q 042825 97 GQVTNIELQDQNRKGTVPPILKKLSSMAVMYLENNQLRGPIPSLVG---SLEFFSAYEANISGTIPDFIGTDTFPQLSYL 173 (631)
Q Consensus 97 ~~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~L~~N~l~g~lP~~~~---~L~~L~l~~n~l~g~ip~~~~~~~l~~L~~L 173 (631)
.+++.|++++|.++ .++.+..+++|++|+|++|++++..|..++ +|+.|++++|++++..|..++ .+++|++|
T Consensus 66 ~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~i~~~~~~~l~--~l~~L~~L 141 (197)
T 4ezg_A 66 HNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSILTKIN--TLPKVNSI 141 (197)
T ss_dssp TTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEECCSSBCBGGGHHHHT--TCSSCCEE
T ss_pred CCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEEecCCccCcHhHHHHh--hCCCCCEE
Confidence 37899999999665 345799999999999999999987777665 899999999999988888887 89999999
Q ss_pred EccCCcccccCCCCCCCCccCcCCCCCCCEEEeecCcCcccCChhhccCCCCCCEEEccCCCCcc
Q 042825 174 DLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNNLLQG 238 (631)
Q Consensus 174 ~Ls~N~l~g~iP~~~~~~~~~~~~l~~L~~L~L~~N~l~g~iP~~~~~~l~~L~~L~ls~N~l~g 238 (631)
+|++|.+.+.+| . +.++++|+.|+|++|++++ ++ . +..+++|+.|++++|++.+
T Consensus 142 ~L~~n~~i~~~~-~-------l~~l~~L~~L~l~~n~i~~-~~-~-l~~l~~L~~L~l~~N~i~~ 195 (197)
T 4ezg_A 142 DLSYNGAITDIM-P-------LKTLPELKSLNIQFDGVHD-YR-G-IEDFPKLNQLYAFSQTIGG 195 (197)
T ss_dssp ECCSCTBCCCCG-G-------GGGCSSCCEEECTTBCCCC-CT-T-GGGCSSCCEEEECBC----
T ss_pred EccCCCCccccH-h-------hcCCCCCCEEECCCCCCcC-hH-H-hccCCCCCEEEeeCcccCC
Confidence 999998433776 2 4589999999999999995 66 3 8899999999999999865
|
| >1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 | Back alignment and structure |
|---|
Probab=99.47 E-value=1.4e-13 Score=141.45 Aligned_cols=145 Identities=21% Similarity=0.396 Sum_probs=117.5
Q ss_pred CCeEEEEeCCCCCcccCcchhcCCccCceeecccCcccCCCCcC--cccccccccccccceecCCCCCCcCCCCCCcEEE
Q 042825 97 GQVTNIELQDQNRKGTVPPILKKLSSMAVMYLENNQLRGPIPSL--VGSLEFFSAYEANISGTIPDFIGTDTFPQLSYLD 174 (631)
Q Consensus 97 ~~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~L~~N~l~g~lP~~--~~~L~~L~l~~n~l~g~ip~~~~~~~l~~L~~L~ 174 (631)
.+++.|+|++|.+++ +++ +..+++|++|+|++|++++ +|.. +.+|+.|++++|++++ +|. +. .+++|++|+
T Consensus 63 ~~L~~L~L~~n~i~~-~~~-~~~l~~L~~L~L~~n~l~~-~~~~~~l~~L~~L~l~~n~l~~-~~~-l~--~l~~L~~L~ 135 (308)
T 1h6u_A 63 NNLIGLELKDNQITD-LAP-LKNLTKITELELSGNPLKN-VSAIAGLQSIKTLDLTSTQITD-VTP-LA--GLSNLQVLY 135 (308)
T ss_dssp TTCCEEECCSSCCCC-CGG-GTTCCSCCEEECCSCCCSC-CGGGTTCTTCCEEECTTSCCCC-CGG-GT--TCTTCCEEE
T ss_pred CCCCEEEccCCcCCC-Chh-HccCCCCCEEEccCCcCCC-chhhcCCCCCCEEECCCCCCCC-chh-hc--CCCCCCEEE
Confidence 478999999999985 555 9999999999999999985 4532 2389999999999986 443 65 789999999
Q ss_pred ccCCcccccCCCCCCCCccCcCCCCCCCEEEeecCcCcccCChhhccCCCCCCEEEccCCCCcccCCCCCCCCceEEeec
Q 042825 175 LGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNNLLQGPTPRFNNSKLTVDMRT 254 (631)
Q Consensus 175 Ls~N~l~g~iP~~~~~~~~~~~~l~~L~~L~L~~N~l~g~iP~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~~~~~~l~~ 254 (631)
|++|+++ .+|. ++++++|+.|+|++|++++ +|. +..+++|+.|++++|.+++..+ +........+++
T Consensus 136 l~~n~l~-~~~~--------l~~l~~L~~L~l~~n~l~~-~~~--l~~l~~L~~L~l~~n~l~~~~~-l~~l~~L~~L~L 202 (308)
T 1h6u_A 136 LDLNQIT-NISP--------LAGLTNLQYLSIGNAQVSD-LTP--LANLSKLTTLKADDNKISDISP-LASLPNLIEVHL 202 (308)
T ss_dssp CCSSCCC-CCGG--------GGGCTTCCEEECCSSCCCC-CGG--GTTCTTCCEEECCSSCCCCCGG-GGGCTTCCEEEC
T ss_pred CCCCccC-cCcc--------ccCCCCccEEEccCCcCCC-Chh--hcCCCCCCEEECCCCccCcChh-hcCCCCCCEEEc
Confidence 9999998 4442 4589999999999999995 553 7899999999999999988655 444445566778
Q ss_pred CCCcccC
Q 042825 255 GSNCFCL 261 (631)
Q Consensus 255 ~~n~~~~ 261 (631)
++|.+.+
T Consensus 203 ~~N~l~~ 209 (308)
T 1h6u_A 203 KNNQISD 209 (308)
T ss_dssp TTSCCCB
T ss_pred cCCccCc
Confidence 9998876
|
| >2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus} | Back alignment and structure |
|---|
Probab=99.46 E-value=1.9e-13 Score=128.18 Aligned_cols=109 Identities=27% Similarity=0.395 Sum_probs=79.9
Q ss_pred EEEEeCCCCCcccCcchhcCCccCceeecccCcccCCCCcCcccccccccccccceecCCCCCCcCCCCCCcEEEccCCc
Q 042825 100 TNIELQDQNRKGTVPPILKKLSSMAVMYLENNQLRGPIPSLVGSLEFFSAYEANISGTIPDFIGTDTFPQLSYLDLGNNN 179 (631)
Q Consensus 100 ~~l~l~~n~l~g~ip~~~~~l~~L~~L~L~~N~l~g~lP~~~~~L~~L~l~~n~l~g~ip~~~~~~~l~~L~~L~Ls~N~ 179 (631)
+.+++++|+++ .+|..+. ++|++|+|++|+|+ +..|..+. .+++|++|+|++|+
T Consensus 15 ~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~---------------------~~~~~~~~--~l~~L~~L~Ls~N~ 68 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQIT---------------------KLEPGVFD--HLVNLQQLYFNSNK 68 (174)
T ss_dssp SEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCC---------------------CCCTTTTT--TCTTCCEEECCSSC
T ss_pred cEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCcc---------------------ccCHHHhc--CCcCCCEEECCCCC
Confidence 45666666664 5555443 45555555555554 45566676 78999999999999
Q ss_pred ccccCCCCCCCCccCcCCCCCCCEEEeecCcCcccCChhhccCCCCCCEEEccCCCCcccCCC
Q 042825 180 LQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNNLLQGPTPR 242 (631)
Q Consensus 180 l~g~iP~~~~~~~~~~~~l~~L~~L~L~~N~l~g~iP~~~~~~l~~L~~L~ls~N~l~g~~p~ 242 (631)
|+ .+|..+ +.++++|++|+|++|+|+ .+|...|..+++|++|+|++|.++...+.
T Consensus 69 l~-~i~~~~------~~~l~~L~~L~L~~N~l~-~l~~~~~~~l~~L~~L~L~~N~~~c~~~~ 123 (174)
T 2r9u_A 69 LT-AIPTGV------FDKLTQLTQLDLNDNHLK-SIPRGAFDNLKSLTHIYLYNNPWDCECRD 123 (174)
T ss_dssp CC-CCCTTT------TTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCSEEECCSSCBCTTBGG
T ss_pred CC-ccChhH------hCCcchhhEEECCCCccc-eeCHHHhccccCCCEEEeCCCCccccccc
Confidence 99 566543 458999999999999999 56655688999999999999998876543
|
| >1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A | Back alignment and structure |
|---|
Probab=99.46 E-value=8.6e-14 Score=141.78 Aligned_cols=145 Identities=26% Similarity=0.351 Sum_probs=111.6
Q ss_pred CCeEEEEeCCCCCcccCcchhcCCccCceeecccCcccCCCCcC--cccccccccccccceecCCCCCCcCCCCCCcEEE
Q 042825 97 GQVTNIELQDQNRKGTVPPILKKLSSMAVMYLENNQLRGPIPSL--VGSLEFFSAYEANISGTIPDFIGTDTFPQLSYLD 174 (631)
Q Consensus 97 ~~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~L~~N~l~g~lP~~--~~~L~~L~l~~n~l~g~ip~~~~~~~l~~L~~L~ 174 (631)
.+++.|+|++|.+++ +++ +.++++|++|+|++|++++ +|.. +.+|+.|++++|++++ + +.+. .+++|+.|+
T Consensus 68 ~~L~~L~L~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~-~~~l~~l~~L~~L~L~~n~i~~-~-~~l~--~l~~L~~L~ 140 (291)
T 1h6t_A 68 PNVTKLFLNGNKLTD-IKP-LANLKNLGWLFLDENKVKD-LSSLKDLKKLKSLSLEHNGISD-I-NGLV--HLPQLESLY 140 (291)
T ss_dssp TTCCEEECCSSCCCC-CGG-GTTCTTCCEEECCSSCCCC-GGGGTTCTTCCEEECTTSCCCC-C-GGGG--GCTTCCEEE
T ss_pred CCCCEEEccCCccCC-Ccc-cccCCCCCEEECCCCcCCC-ChhhccCCCCCEEECCCCcCCC-C-hhhc--CCCCCCEEE
Confidence 478899999999986 444 8899999999999999885 4542 2388999999999886 3 3455 788999999
Q ss_pred ccCCcccccCCCCCCCCccCcCCCCCCCEEEeecCcCcccCChhhccCCCCCCEEEccCCCCcccCCCCCCCCceEEeec
Q 042825 175 LGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNNLLQGPTPRFNNSKLTVDMRT 254 (631)
Q Consensus 175 Ls~N~l~g~iP~~~~~~~~~~~~l~~L~~L~L~~N~l~g~iP~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~~~~~~l~~ 254 (631)
|++|++++ ++ . ++++++|++|+|++|++++ ++. +..+++|+.|+|++|.+++. |.+........+++
T Consensus 141 l~~n~l~~-~~-~-------l~~l~~L~~L~L~~N~l~~-~~~--l~~l~~L~~L~L~~N~i~~l-~~l~~l~~L~~L~l 207 (291)
T 1h6t_A 141 LGNNKITD-IT-V-------LSRLTKLDTLSLEDNQISD-IVP--LAGLTKLQNLYLSKNHISDL-RALAGLKNLDVLEL 207 (291)
T ss_dssp CCSSCCCC-CG-G-------GGGCTTCSEEECCSSCCCC-CGG--GTTCTTCCEEECCSSCCCBC-GGGTTCTTCSEEEE
T ss_pred ccCCcCCc-ch-h-------hccCCCCCEEEccCCcccc-chh--hcCCCccCEEECCCCcCCCC-hhhccCCCCCEEEC
Confidence 99999984 43 2 5688999999999999985 442 77889999999999998874 44555545556667
Q ss_pred CCCcccC
Q 042825 255 GSNCFCL 261 (631)
Q Consensus 255 ~~n~~~~ 261 (631)
++|.++.
T Consensus 208 ~~n~i~~ 214 (291)
T 1h6t_A 208 FSQECLN 214 (291)
T ss_dssp EEEEEEC
T ss_pred cCCcccC
Confidence 8888765
|
| >1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A | Back alignment and structure |
|---|
Probab=99.45 E-value=1.9e-13 Score=139.21 Aligned_cols=146 Identities=22% Similarity=0.352 Sum_probs=120.9
Q ss_pred CCeEEEEeCCCCCcccCcchhcCCccCceeecccCcccCCCC-cCcccccccccccccceecCCCCCCcCCCCCCcEEEc
Q 042825 97 GQVTNIELQDQNRKGTVPPILKKLSSMAVMYLENNQLRGPIP-SLVGSLEFFSAYEANISGTIPDFIGTDTFPQLSYLDL 175 (631)
Q Consensus 97 ~~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~L~~N~l~g~lP-~~~~~L~~L~l~~n~l~g~ip~~~~~~~l~~L~~L~L 175 (631)
.+++.|++++|.+.. +| .+..+++|++|+|++|++++..| ..+.+|+.|++++|++++ +|. +. .+++|++|+|
T Consensus 46 ~~L~~L~l~~~~i~~-~~-~~~~l~~L~~L~L~~n~l~~~~~l~~l~~L~~L~l~~n~l~~-~~~-l~--~l~~L~~L~L 119 (291)
T 1h6t_A 46 NSIDQIIANNSDIKS-VQ-GIQYLPNVTKLFLNGNKLTDIKPLANLKNLGWLFLDENKVKD-LSS-LK--DLKKLKSLSL 119 (291)
T ss_dssp HTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGGGTTCTTCCEEECCSSCCCC-GGG-GT--TCTTCCEEEC
T ss_pred CcccEEEccCCCccc-Ch-hHhcCCCCCEEEccCCccCCCcccccCCCCCEEECCCCcCCC-Chh-hc--cCCCCCEEEC
Confidence 368999999999984 54 48999999999999999996443 123389999999999986 443 66 8999999999
Q ss_pred cCCcccccCCCCCCCCccCcCCCCCCCEEEeecCcCcccCChhhccCCCCCCEEEccCCCCcccCCCCCCCCceEEeecC
Q 042825 176 GNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNNLLQGPTPRFNNSKLTVDMRTG 255 (631)
Q Consensus 176 s~N~l~g~iP~~~~~~~~~~~~l~~L~~L~L~~N~l~g~iP~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~~~~~~l~~~ 255 (631)
++|++++ ++ .+.++++|+.|+|++|++++ ++ .+..+++|+.|++++|.+++..| +........++++
T Consensus 120 ~~n~i~~-~~--------~l~~l~~L~~L~l~~n~l~~-~~--~l~~l~~L~~L~L~~N~l~~~~~-l~~l~~L~~L~L~ 186 (291)
T 1h6t_A 120 EHNGISD-IN--------GLVHLPQLESLYLGNNKITD-IT--VLSRLTKLDTLSLEDNQISDIVP-LAGLTKLQNLYLS 186 (291)
T ss_dssp TTSCCCC-CG--------GGGGCTTCCEEECCSSCCCC-CG--GGGGCTTCSEEECCSSCCCCCGG-GTTCTTCCEEECC
T ss_pred CCCcCCC-Ch--------hhcCCCCCCEEEccCCcCCc-ch--hhccCCCCCEEEccCCccccchh-hcCCCccCEEECC
Confidence 9999994 44 25689999999999999995 44 48899999999999999998776 5555556677889
Q ss_pred CCcccC
Q 042825 256 SNCFCL 261 (631)
Q Consensus 256 ~n~~~~ 261 (631)
+|.++.
T Consensus 187 ~N~i~~ 192 (291)
T 1h6t_A 187 KNHISD 192 (291)
T ss_dssp SSCCCB
T ss_pred CCcCCC
Confidence 998876
|
| >2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A | Back alignment and structure |
|---|
Probab=99.43 E-value=4.4e-14 Score=128.61 Aligned_cols=111 Identities=21% Similarity=0.329 Sum_probs=91.6
Q ss_pred CCccCceeecccCccc-CCCCcCcc---cccccccccccceecCCCCCCcCCCCCCcEEEccCCcccccCCCCCCCCccC
Q 042825 119 KLSSMAVMYLENNQLR-GPIPSLVG---SLEFFSAYEANISGTIPDFIGTDTFPQLSYLDLGNNNLQGTIPSSFGMPFAD 194 (631)
Q Consensus 119 ~l~~L~~L~L~~N~l~-g~lP~~~~---~L~~L~l~~n~l~g~ip~~~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~~~~~ 194 (631)
..++|+.|++++|.++ +.+|..+. +|+.|++++|++++. ..++ .+++|++|+|++|++++.+|..
T Consensus 15 ~~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~--~l~~L~~L~Ls~n~i~~~~~~~------- 83 (149)
T 2je0_A 15 TPSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLP--KLNKLKKLELSDNRVSGGLEVL------- 83 (149)
T ss_dssp CGGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCC--CCTTCCEEECCSSCCCSCTHHH-------
T ss_pred CCccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhh--cCCCCCEEECCCCcccchHHHH-------
Confidence 3478999999999998 78887654 899999999999865 6666 7899999999999999767754
Q ss_pred cCCCCCCCEEEeecCcCccc-CChhhccCCCCCCEEEccCCCCcccCC
Q 042825 195 ISNLSTLEDLSLGHNKLTGI-FPVSSFNNHPKLTTLNLTNNLLQGPTP 241 (631)
Q Consensus 195 ~~~l~~L~~L~L~~N~l~g~-iP~~~~~~l~~L~~L~ls~N~l~g~~p 241 (631)
+.++++|++|+|++|++++. .|. .+..+++|++|++++|.+++..+
T Consensus 84 ~~~l~~L~~L~ls~N~i~~~~~~~-~~~~l~~L~~L~l~~N~l~~~~~ 130 (149)
T 2je0_A 84 AEKCPNLTHLNLSGNKIKDLSTIE-PLKKLENLKSLDLFNCEVTNLND 130 (149)
T ss_dssp HHHCTTCCEEECTTSCCCSHHHHG-GGGGCTTCCEEECTTCGGGGSTT
T ss_pred hhhCCCCCEEECCCCcCCChHHHH-HHhhCCCCCEEeCcCCcccchHH
Confidence 34689999999999999863 233 48899999999999999988766
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} | Back alignment and structure |
|---|
Probab=99.42 E-value=1.5e-13 Score=143.38 Aligned_cols=144 Identities=24% Similarity=0.417 Sum_probs=76.5
Q ss_pred CeEEEEeCCCCCcccCcchhcCCccCceeecccCcccCCCCc--CcccccccccccccceecCCCCCCcCCCCCCcEEEc
Q 042825 98 QVTNIELQDQNRKGTVPPILKKLSSMAVMYLENNQLRGPIPS--LVGSLEFFSAYEANISGTIPDFIGTDTFPQLSYLDL 175 (631)
Q Consensus 98 ~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~L~~N~l~g~lP~--~~~~L~~L~l~~n~l~g~ip~~~~~~~l~~L~~L~L 175 (631)
+++.|++++|.+.+..+ +..+++|+.|++++|.+++ ++. .+.+|+.|++++|++++..+ +. .+++|+.|+|
T Consensus 156 ~L~~L~l~~~~~~~~~~--~~~l~~L~~L~l~~n~l~~-~~~~~~l~~L~~L~l~~n~l~~~~~--~~--~~~~L~~L~l 228 (347)
T 4fmz_A 156 GLNYLTVTESKVKDVTP--IANLTDLYSLSLNYNQIED-ISPLASLTSLHYFTAYVNQITDITP--VA--NMTRLNSLKI 228 (347)
T ss_dssp TCCEEECCSSCCCCCGG--GGGCTTCSEEECTTSCCCC-CGGGGGCTTCCEEECCSSCCCCCGG--GG--GCTTCCEEEC
T ss_pred CCcEEEecCCCcCCchh--hccCCCCCEEEccCCcccc-cccccCCCccceeecccCCCCCCch--hh--cCCcCCEEEc
Confidence 45555555555543222 5555555555555555553 222 12255555555555554322 33 4556666666
Q ss_pred cCCcccccCCCCCCCCccCcCCCCCCCEEEeecCcCcccCChhhccCCCCCCEEEccCCCCcccCCCCCCCCceEEeecC
Q 042825 176 GNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNNLLQGPTPRFNNSKLTVDMRTG 255 (631)
Q Consensus 176 s~N~l~g~iP~~~~~~~~~~~~l~~L~~L~L~~N~l~g~iP~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~~~~~~l~~~ 255 (631)
++|+++ .+|. +..+++|++|+|++|++++ ++ .+..+++|+.|++++|.+++. |.+........++++
T Consensus 229 ~~n~l~-~~~~--------~~~l~~L~~L~l~~n~l~~-~~--~~~~l~~L~~L~l~~n~l~~~-~~~~~l~~L~~L~L~ 295 (347)
T 4fmz_A 229 GNNKIT-DLSP--------LANLSQLTWLEIGTNQISD-IN--AVKDLTKLKMLNVGSNQISDI-SVLNNLSQLNSLFLN 295 (347)
T ss_dssp CSSCCC-CCGG--------GTTCTTCCEEECCSSCCCC-CG--GGTTCTTCCEEECCSSCCCCC-GGGGGCTTCSEEECC
T ss_pred cCCccC-CCcc--------hhcCCCCCEEECCCCccCC-Ch--hHhcCCCcCEEEccCCccCCC-hhhcCCCCCCEEECc
Confidence 666665 3332 3356666666776666663 33 256666677777776666654 333333334445556
Q ss_pred CCcccC
Q 042825 256 SNCFCL 261 (631)
Q Consensus 256 ~n~~~~ 261 (631)
+|.+.+
T Consensus 296 ~n~l~~ 301 (347)
T 4fmz_A 296 NNQLGN 301 (347)
T ss_dssp SSCCCG
T ss_pred CCcCCC
Confidence 666554
|
| >1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A | Back alignment and structure |
|---|
Probab=99.42 E-value=3.3e-13 Score=151.01 Aligned_cols=145 Identities=23% Similarity=0.351 Sum_probs=121.4
Q ss_pred CeEEEEeCCCCCcccCcchhcCCccCceeecccCcccCCCC-cCcccccccccccccceecCCCCCCcCCCCCCcEEEcc
Q 042825 98 QVTNIELQDQNRKGTVPPILKKLSSMAVMYLENNQLRGPIP-SLVGSLEFFSAYEANISGTIPDFIGTDTFPQLSYLDLG 176 (631)
Q Consensus 98 ~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~L~~N~l~g~lP-~~~~~L~~L~l~~n~l~g~ip~~~~~~~l~~L~~L~Ls 176 (631)
+|+.|+|++|.+. .+| .+..|++|+.|+|++|+|++..| ..+.+|+.|+|++|++++ +| .+. .+++|+.|+|+
T Consensus 44 ~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~Ls~N~l~~~~~l~~l~~L~~L~Ls~N~l~~-l~-~l~--~l~~L~~L~Ls 117 (605)
T 1m9s_A 44 SIDQIIANNSDIK-SVQ-GIQYLPNVTKLFLNGNKLTDIKPLTNLKNLGWLFLDENKIKD-LS-SLK--DLKKLKSLSLE 117 (605)
T ss_dssp TCCCCBCTTCCCC-CCT-TGGGCTTCCEEECTTSCCCCCGGGGGCTTCCEEECCSSCCCC-CT-TST--TCTTCCEEECT
T ss_pred CCCEEECcCCCCC-CCh-HHccCCCCCEEEeeCCCCCCChhhccCCCCCEEECcCCCCCC-Ch-hhc--cCCCCCEEEec
Confidence 5778899999988 455 59999999999999999996544 123389999999999986 44 566 89999999999
Q ss_pred CCcccccCCCCCCCCccCcCCCCCCCEEEeecCcCcccCChhhccCCCCCCEEEccCCCCcccCCCCCCCCceEEeecCC
Q 042825 177 NNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNNLLQGPTPRFNNSKLTVDMRTGS 256 (631)
Q Consensus 177 ~N~l~g~iP~~~~~~~~~~~~l~~L~~L~L~~N~l~g~iP~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~~~~~~l~~~~ 256 (631)
+|+|++ +| .+.+|++|+.|+|++|+|++ ++ .+..+++|+.|+|++|.|++.+| +..+..+..|++++
T Consensus 118 ~N~l~~-l~--------~l~~l~~L~~L~Ls~N~l~~-l~--~l~~l~~L~~L~Ls~N~l~~~~~-l~~l~~L~~L~Ls~ 184 (605)
T 1m9s_A 118 HNGISD-IN--------GLVHLPQLESLYLGNNKITD-IT--VLSRLTKLDTLSLEDNQISDIVP-LAGLTKLQNLYLSK 184 (605)
T ss_dssp TSCCCC-CG--------GGGGCTTCSEEECCSSCCCC-CG--GGGSCTTCSEEECCSSCCCCCGG-GTTCTTCCEEECCS
T ss_pred CCCCCC-Cc--------cccCCCccCEEECCCCccCC-ch--hhcccCCCCEEECcCCcCCCchh-hccCCCCCEEECcC
Confidence 999994 44 25689999999999999996 44 48999999999999999999877 55555666788899
Q ss_pred CcccC
Q 042825 257 NCFCL 261 (631)
Q Consensus 257 n~~~~ 261 (631)
|.+++
T Consensus 185 N~i~~ 189 (605)
T 1m9s_A 185 NHISD 189 (605)
T ss_dssp SCCCB
T ss_pred CCCCC
Confidence 99887
|
| >2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A | Back alignment and structure |
|---|
Probab=99.42 E-value=4.7e-15 Score=157.38 Aligned_cols=155 Identities=19% Similarity=0.258 Sum_probs=118.2
Q ss_pred CCeEEEEeCCCCCcc----cCcchhcCCccCceeecccCcccCC----CCcCc------------ccccccccccccce-
Q 042825 97 GQVTNIELQDQNRKG----TVPPILKKLSSMAVMYLENNQLRGP----IPSLV------------GSLEFFSAYEANIS- 155 (631)
Q Consensus 97 ~~l~~l~l~~n~l~g----~ip~~~~~l~~L~~L~L~~N~l~g~----lP~~~------------~~L~~L~l~~n~l~- 155 (631)
.+++.|+|++|.+++ .+|..+.++++|++|+|++|.|++. ++..+ .+|+.|++++|+++
T Consensus 94 ~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~ 173 (386)
T 2ca6_A 94 PKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLEN 173 (386)
T ss_dssp TTCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTG
T ss_pred CcccEEECCCCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCc
Confidence 578999999999987 5888899999999999999998643 22222 58899999999987
Q ss_pred ecCC---CCCCcCCCCCCcEEEccCCccc--c---cCCCCCCCCccCcCCCCCCCEEEeecCcCc----ccCChhhccCC
Q 042825 156 GTIP---DFIGTDTFPQLSYLDLGNNNLQ--G---TIPSSFGMPFADISNLSTLEDLSLGHNKLT----GIFPVSSFNNH 223 (631)
Q Consensus 156 g~ip---~~~~~~~l~~L~~L~Ls~N~l~--g---~iP~~~~~~~~~~~~l~~L~~L~L~~N~l~----g~iP~~~~~~l 223 (631)
+.+| ..+. .+++|+.|+|++|+++ | .+|.. +.++++|++|+|++|+++ +.+|.. +..+
T Consensus 174 ~~~~~l~~~l~--~~~~L~~L~L~~n~l~~~g~~~l~~~~-------l~~~~~L~~L~Ls~n~l~~~g~~~l~~~-l~~~ 243 (386)
T 2ca6_A 174 GSMKEWAKTFQ--SHRLLHTVKMVQNGIRPEGIEHLLLEG-------LAYCQELKVLDLQDNTFTHLGSSALAIA-LKSW 243 (386)
T ss_dssp GGHHHHHHHHH--HCTTCCEEECCSSCCCHHHHHHHHHTT-------GGGCTTCCEEECCSSCCHHHHHHHHHHH-GGGC
T ss_pred HHHHHHHHHHH--hCCCcCEEECcCCCCCHhHHHHHHHHH-------hhcCCCccEEECcCCCCCcHHHHHHHHH-HccC
Confidence 4455 3454 6789999999999987 3 23323 458899999999999996 678864 8889
Q ss_pred CCCCEEEccCCCCccc----CCCC---CCCCceEEeecCCCcccC
Q 042825 224 PKLTTLNLTNNLLQGP----TPRF---NNSKLTVDMRTGSNCFCL 261 (631)
Q Consensus 224 ~~L~~L~ls~N~l~g~----~p~~---~~~~~~~~l~~~~n~~~~ 261 (631)
++|+.|+|++|.+++. +|.. ........+++++|.++.
T Consensus 244 ~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~ 288 (386)
T 2ca6_A 244 PNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIEL 288 (386)
T ss_dssp TTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBH
T ss_pred CCcCEEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCH
Confidence 9999999999999875 3332 113334556778888765
|
| >1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A* | Back alignment and structure |
|---|
Probab=99.40 E-value=2.2e-13 Score=151.45 Aligned_cols=106 Identities=21% Similarity=0.298 Sum_probs=74.7
Q ss_pred CceeecccCcccCCCCcCcc---cccccccccccceecCCCCCCcCCCCCCcEEEccCCcccccCCCCCCCCccCcCCCC
Q 042825 123 MAVMYLENNQLRGPIPSLVG---SLEFFSAYEANISGTIPDFIGTDTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLS 199 (631)
Q Consensus 123 L~~L~L~~N~l~g~lP~~~~---~L~~L~l~~n~l~g~ip~~~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~~~~~~~~l~ 199 (631)
|+.|+|++|+|++ +|. ++ +|+.|+|++|+++ .+|..++ .+++|+.|+|++|+|++ +| . +++++
T Consensus 443 L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~--~l~~L~~L~Ls~N~l~~-lp-~-------l~~l~ 508 (567)
T 1dce_A 443 VRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALA--ALRCLEVLQASDNALEN-VD-G-------VANLP 508 (567)
T ss_dssp CSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGG--GCTTCCEEECCSSCCCC-CG-G-------GTTCS
T ss_pred ceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhh--cCCCCCEEECCCCCCCC-Cc-c-------cCCCC
Confidence 5666666666663 554 33 5666666666666 6677776 77888888888888884 66 3 34788
Q ss_pred CCCEEEeecCcCcccC-ChhhccCCCCCCEEEccCCCCcccCCCC
Q 042825 200 TLEDLSLGHNKLTGIF-PVSSFNNHPKLTTLNLTNNLLQGPTPRF 243 (631)
Q Consensus 200 ~L~~L~L~~N~l~g~i-P~~~~~~l~~L~~L~ls~N~l~g~~p~~ 243 (631)
+|++|+|++|+|++.+ |.. ++.+++|+.|+|++|.|++.+|..
T Consensus 509 ~L~~L~Ls~N~l~~~~~p~~-l~~l~~L~~L~L~~N~l~~~~~~~ 552 (567)
T 1dce_A 509 RLQELLLCNNRLQQSAAIQP-LVSCPRLVLLNLQGNSLCQEEGIQ 552 (567)
T ss_dssp SCCEEECCSSCCCSSSTTGG-GGGCTTCCEEECTTSGGGGSSSCT
T ss_pred CCcEEECCCCCCCCCCCcHH-HhcCCCCCEEEecCCcCCCCccHH
Confidence 8888888888888655 654 778888888888888888877653
|
| >4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C* | Back alignment and structure |
|---|
Probab=99.40 E-value=8.2e-13 Score=138.20 Aligned_cols=168 Identities=14% Similarity=0.173 Sum_probs=114.9
Q ss_pred CCccceeeCCC----------CCeEEEEeCCCCCcccCcc-hhcCCccCceeecccCcccCCCCcC-cc---ccc-cccc
Q 042825 86 CQWSHVICSDD----------GQVTNIELQDQNRKGTVPP-ILKKLSSMAVMYLENNQLRGPIPSL-VG---SLE-FFSA 149 (631)
Q Consensus 86 C~w~gv~C~~~----------~~l~~l~l~~n~l~g~ip~-~~~~l~~L~~L~L~~N~l~g~lP~~-~~---~L~-~L~l 149 (631)
|.|..|.|.+. .+++.|+|++|+++ .||+ .|.+|++|++|+|++|++.+.+|.. +. +|. .+.+
T Consensus 9 C~~~~v~C~~~~Lt~iP~~l~~~l~~L~Ls~N~i~-~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~ 87 (350)
T 4ay9_X 9 CSNRVFLCQESKVTEIPSDLPRNAIELRFVLTKLR-VIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIE 87 (350)
T ss_dssp EETTEEEEESTTCCSCCTTCCTTCSEEEEESCCCS-EECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEE
T ss_pred eeCCEEEecCCCCCccCcCcCCCCCEEEccCCcCC-CcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcc
Confidence 67888999531 36899999999999 5654 6899999999999999998888764 33 333 4667
Q ss_pred ccccceecCCCCCCcCCCCCCcEEEccCCcccccCCCCCCCCccCcCCCCCCCEEEeec-CcCcccCChhhccCCC-CCC
Q 042825 150 YEANISGTIPDFIGTDTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGH-NKLTGIFPVSSFNNHP-KLT 227 (631)
Q Consensus 150 ~~n~l~g~ip~~~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~~~~~~~~l~~L~~L~L~~-N~l~g~iP~~~~~~l~-~L~ 227 (631)
..|+++...|..+. .+++|++|++++|+++ .+|... +.+..++..|++.+ |++. .+|...|..+. .++
T Consensus 88 ~~N~l~~l~~~~f~--~l~~L~~L~l~~n~l~-~~~~~~------~~~~~~l~~l~l~~~~~i~-~l~~~~f~~~~~~l~ 157 (350)
T 4ay9_X 88 KANNLLYINPEAFQ--NLPNLQYLLISNTGIK-HLPDVH------KIHSLQKVLLDIQDNINIH-TIERNSFVGLSFESV 157 (350)
T ss_dssp EETTCCEECTTSBC--CCTTCCEEEEEEECCS-SCCCCT------TCCBSSCEEEEEESCTTCC-EECTTSSTTSBSSCE
T ss_pred cCCcccccCchhhh--hccccccccccccccc-cCCchh------hcccchhhhhhhccccccc-cccccchhhcchhhh
Confidence 78999987788887 8999999999999999 555432 22444566666654 3444 45544454443 466
Q ss_pred EEEccCCCCcccCCCCCCCCceEEeecCCCcccCCCC
Q 042825 228 TLNLTNNLLQGPTPRFNNSKLTVDMRTGSNCFCLDDP 264 (631)
Q Consensus 228 ~L~ls~N~l~g~~p~~~~~~~~~~l~~~~n~~~~~~~ 264 (631)
.|+|++|+|+...+..+.......+++++|+.-..+|
T Consensus 158 ~L~L~~N~i~~i~~~~f~~~~L~~l~l~~~n~l~~i~ 194 (350)
T 4ay9_X 158 ILWLNKNGIQEIHNSAFNGTQLDELNLSDNNNLEELP 194 (350)
T ss_dssp EEECCSSCCCEECTTSSTTEEEEEEECTTCTTCCCCC
T ss_pred hhccccccccCCChhhccccchhHHhhccCCcccCCC
Confidence 6777777776655554444344445555433333344
|
| >4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C* | Back alignment and structure |
|---|
Probab=99.40 E-value=1.4e-12 Score=136.34 Aligned_cols=136 Identities=15% Similarity=0.094 Sum_probs=99.0
Q ss_pred EEEEeCCCCCcccCcchhcCCccCceeecccCcccCCCCcCcc---cccccccccc-cceecCCCCCCcCCC-CCCcEEE
Q 042825 100 TNIELQDQNRKGTVPPILKKLSSMAVMYLENNQLRGPIPSLVG---SLEFFSAYEA-NISGTIPDFIGTDTF-PQLSYLD 174 (631)
Q Consensus 100 ~~l~l~~n~l~g~ip~~~~~l~~L~~L~L~~N~l~g~lP~~~~---~L~~L~l~~n-~l~g~ip~~~~~~~l-~~L~~L~ 174 (631)
+.+.+..|+++...|..|..+++|++|++++|+|++..+..+. ++..|++.++ ++...-+..+. .+ ..|+.|+
T Consensus 83 ~~l~~~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~--~~~~~l~~L~ 160 (350)
T 4ay9_X 83 EIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFV--GLSFESVILW 160 (350)
T ss_dssp EEEEEEETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSST--TSBSSCEEEE
T ss_pred hhhcccCCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccccccccchh--hcchhhhhhc
Confidence 4567778888876677889999999999999999854443332 5667777654 55533333444 33 4688999
Q ss_pred ccCCcccccCCCCCCCCccCcCCCCCCCEEEeecCcCcccCChhhccCCCCCCEEEccCCCCcccCCCCCC
Q 042825 175 LGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNNLLQGPTPRFNN 245 (631)
Q Consensus 175 Ls~N~l~g~iP~~~~~~~~~~~~l~~L~~L~L~~N~l~g~iP~~~~~~l~~L~~L~ls~N~l~g~~p~~~~ 245 (631)
|++|+|+ .||..+. ...+|+.|++++|+..+.||...|..+++|+.|+|++|+|+..++....
T Consensus 161 L~~N~i~-~i~~~~f-------~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~~lp~~~~~ 223 (350)
T 4ay9_X 161 LNKNGIQ-EIHNSAF-------NGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGLE 223 (350)
T ss_dssp CCSSCCC-EECTTSS-------TTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCCCCCSSSCT
T ss_pred ccccccc-CCChhhc-------cccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcCccChhhhc
Confidence 9999998 7776542 5678999999864433488877788999999999999999877665443
|
| >1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4 | Back alignment and structure |
|---|
Probab=99.39 E-value=1.9e-13 Score=128.22 Aligned_cols=127 Identities=17% Similarity=0.191 Sum_probs=78.5
Q ss_pred CCeEEEEeCCCCCcccCcchhcCCc-cCceeecccCcccCCCCcCc---ccccccccccccceecCCCCC-CcCCCCCCc
Q 042825 97 GQVTNIELQDQNRKGTVPPILKKLS-SMAVMYLENNQLRGPIPSLV---GSLEFFSAYEANISGTIPDFI-GTDTFPQLS 171 (631)
Q Consensus 97 ~~l~~l~l~~n~l~g~ip~~~~~l~-~L~~L~L~~N~l~g~lP~~~---~~L~~L~l~~n~l~g~ip~~~-~~~~l~~L~ 171 (631)
.+++.|+|++|+++ .+|. +..+. +|++|+|++|+|++. + .+ .+|+.|++++|++++. |..+ . .+++|+
T Consensus 19 ~~L~~L~l~~n~l~-~i~~-~~~~~~~L~~L~Ls~N~l~~~-~-~l~~l~~L~~L~Ls~N~l~~~-~~~~~~--~l~~L~ 91 (176)
T 1a9n_A 19 VRDRELDLRGYKIP-VIEN-LGATLDQFDAIDFSDNEIRKL-D-GFPLLRRLKTLLVNNNRICRI-GEGLDQ--ALPDLT 91 (176)
T ss_dssp TSCEEEECTTSCCC-SCCC-GGGGTTCCSEEECCSSCCCEE-C-CCCCCSSCCEEECCSSCCCEE-CSCHHH--HCTTCC
T ss_pred CCceEEEeeCCCCc-hhHH-hhhcCCCCCEEECCCCCCCcc-c-ccccCCCCCEEECCCCccccc-Ccchhh--cCCCCC
Confidence 36777888888777 4544 44444 778888888877753 2 22 2666777777777643 3333 4 566777
Q ss_pred EEEccCCcccccCCCCCCCCccCcCCCCCCCEEEeecCcCcccCChh---hccCCCCCCEEEccCCCCc
Q 042825 172 YLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVS---SFNNHPKLTTLNLTNNLLQ 237 (631)
Q Consensus 172 ~L~Ls~N~l~g~iP~~~~~~~~~~~~l~~L~~L~L~~N~l~g~iP~~---~~~~l~~L~~L~ls~N~l~ 237 (631)
+|+|++|+++ .+|.. ..+.++++|+.|+|++|.++ .+|.. .+..+++|+.|++++|.+.
T Consensus 92 ~L~L~~N~i~-~~~~~-----~~l~~l~~L~~L~l~~N~i~-~~~~~~~~~~~~l~~L~~Ld~~~n~~~ 153 (176)
T 1a9n_A 92 ELILTNNSLV-ELGDL-----DPLASLKSLTYLCILRNPVT-NKKHYRLYVIYKVPQVRVLDFQKVKLK 153 (176)
T ss_dssp EEECCSCCCC-CGGGG-----GGGGGCTTCCEEECCSSGGG-GSTTHHHHHHHHCTTCSEETTEECCHH
T ss_pred EEECCCCcCC-cchhh-----HhhhcCCCCCEEEecCCCCC-CcHhHHHHHHHHCCccceeCCCcCCHH
Confidence 7777777775 55530 12346667777777777776 45532 3566677777777666554
|
| >1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A | Back alignment and structure |
|---|
Probab=99.38 E-value=2.3e-15 Score=144.28 Aligned_cols=130 Identities=23% Similarity=0.298 Sum_probs=109.3
Q ss_pred CeEEEEeCCCCCcccCcc------hhcCCccCceeecccCcccCCCCcCcc---cccccccccccceecCCCCCCcCCCC
Q 042825 98 QVTNIELQDQNRKGTVPP------ILKKLSSMAVMYLENNQLRGPIPSLVG---SLEFFSAYEANISGTIPDFIGTDTFP 168 (631)
Q Consensus 98 ~l~~l~l~~n~l~g~ip~------~~~~l~~L~~L~L~~N~l~g~lP~~~~---~L~~L~l~~n~l~g~ip~~~~~~~l~ 168 (631)
+++.++++.+.++|.+|. .+..+++|++|+|++|++++ +| .+. +|+.|++++|+++ .+|..+. .++
T Consensus 19 ~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~--~~~ 93 (198)
T 1ds9_A 19 SVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDA--VAD 93 (198)
T ss_dssp CCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHH--HHH
T ss_pred cccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhh--cCC
Confidence 566677777777777776 89999999999999999996 77 544 8999999999998 6887766 678
Q ss_pred CCcEEEccCCcccccCCCCCCCCccCcCCCCCCCEEEeecCcCcccCCh-hhccCCCCCCEEEccCCCCcccCCC
Q 042825 169 QLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPV-SSFNNHPKLTTLNLTNNLLQGPTPR 242 (631)
Q Consensus 169 ~L~~L~Ls~N~l~g~iP~~~~~~~~~~~~l~~L~~L~L~~N~l~g~iP~-~~~~~l~~L~~L~ls~N~l~g~~p~ 242 (631)
+|++|+|++|++++ +| . +.++++|++|+|++|++++ +|. ..+..+++|++|++++|.+++.+|.
T Consensus 94 ~L~~L~L~~N~l~~-l~-~-------~~~l~~L~~L~l~~N~i~~-~~~~~~l~~l~~L~~L~l~~N~l~~~~~~ 158 (198)
T 1ds9_A 94 TLEELWISYNQIAS-LS-G-------IEKLVNLRVLYMSNNKITN-WGEIDKLAALDKLEDLLLAGNPLYNDYKE 158 (198)
T ss_dssp HCSEEEEEEEECCC-HH-H-------HHHHHHSSEEEESEEECCC-HHHHHHHTTTTTCSEEEECSCHHHHHHHT
T ss_pred cCCEEECcCCcCCc-CC-c-------cccCCCCCEEECCCCcCCc-hhHHHHHhcCCCCCEEEecCCcccccccc
Confidence 99999999999994 65 2 4589999999999999994 443 3488999999999999999988765
|
| >2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A | Back alignment and structure |
|---|
Probab=99.38 E-value=4.2e-15 Score=157.81 Aligned_cols=236 Identities=14% Similarity=0.130 Sum_probs=156.3
Q ss_pred CCCCCc-eecccceeehhhhcc----c----cchhhhhhhhhhhccccccc---cccCCCCCCCChhhHHHHHHHHHhCC
Q 042825 6 WHPSNF-QLFGFPRLTFRDCMT----A----TSELEREKTERVQGDRRKKR---RKIPSASSNQSRPDAAVMQDLKASFV 73 (631)
Q Consensus 6 ~~~~~~-~~~~~~~~~~~~~~~----~----~~~~~~~~l~~l~~~~~~~~---~~~~~~~~~~~~~~~~~l~~~k~~~~ 73 (631)
.++..+ ++.+++.|.+.++.. + .......+|+.|++++|.+. +.+|. .+..+...+.
T Consensus 23 ~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~-----------~~~~l~~~l~ 91 (386)
T 2ca6_A 23 SVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPE-----------ALRLLLQALL 91 (386)
T ss_dssp TTSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHH-----------HHHHHHHHHT
T ss_pred HHHHHHhcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhH-----------HHHHHHHHHh
Confidence 445555 566788888887742 1 11335789999999986544 33332 2223333332
Q ss_pred CCCCCCCCCCCCCCccc--ee--e---CCCCCeEEEEeCCCCCcccCcc----hhcCC---------ccCceeecccCcc
Q 042825 74 IPKRLKWSDPDPCQWSH--VI--C---SDDGQVTNIELQDQNRKGTVPP----ILKKL---------SSMAVMYLENNQL 133 (631)
Q Consensus 74 ~~~~~~w~~~~~C~w~g--v~--C---~~~~~l~~l~l~~n~l~g~ip~----~~~~l---------~~L~~L~L~~N~l 133 (631)
....+..-.-..|...+ +. + ....+++.|+|++|.+++..+. .+..+ ++|++|+|++|++
T Consensus 92 ~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l 171 (386)
T 2ca6_A 92 KCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRL 171 (386)
T ss_dssp TCTTCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCC
T ss_pred hCCcccEEECCCCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCC
Confidence 21111100000111111 00 0 1235899999999999754443 34444 8999999999999
Q ss_pred c-CCCCc---C---cccccccccccccce--e---cCCCCCCcCCCCCCcEEEccCCccc----ccCCCCCCCCccCcCC
Q 042825 134 R-GPIPS---L---VGSLEFFSAYEANIS--G---TIPDFIGTDTFPQLSYLDLGNNNLQ----GTIPSSFGMPFADISN 197 (631)
Q Consensus 134 ~-g~lP~---~---~~~L~~L~l~~n~l~--g---~ip~~~~~~~l~~L~~L~Ls~N~l~----g~iP~~~~~~~~~~~~ 197 (631)
+ +.+|. . ..+|+.|++++|+++ | .+|..+. .+++|+.|+|++|.++ +.+|.. +.+
T Consensus 172 ~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~--~~~~L~~L~Ls~n~l~~~g~~~l~~~-------l~~ 242 (386)
T 2ca6_A 172 ENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLA--YCQELKVLDLQDNTFTHLGSSALAIA-------LKS 242 (386)
T ss_dssp TGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGG--GCTTCCEEECCSSCCHHHHHHHHHHH-------GGG
T ss_pred CcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhh--cCCCccEEECcCCCCCcHHHHHHHHH-------Hcc
Confidence 8 55663 2 338999999999998 4 4565776 7899999999999996 577755 458
Q ss_pred CCCCCEEEeecCcCccc----CChhhc--cCCCCCCEEEccCCCCcc----cCCCCC-C-CCceEEeecCCCcccCC
Q 042825 198 LSTLEDLSLGHNKLTGI----FPVSSF--NNHPKLTTLNLTNNLLQG----PTPRFN-N-SKLTVDMRTGSNCFCLD 262 (631)
Q Consensus 198 l~~L~~L~L~~N~l~g~----iP~~~~--~~l~~L~~L~ls~N~l~g----~~p~~~-~-~~~~~~l~~~~n~~~~~ 262 (631)
+++|++|+|++|++++. +|.. + +.+++|+.|+|++|.+++ .+|... . +.....+++++|.+++.
T Consensus 243 ~~~L~~L~L~~n~i~~~~~~~l~~~-l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~~ 318 (386)
T 2ca6_A 243 WPNLRELGLNDCLLSARGAAAVVDA-FSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEE 318 (386)
T ss_dssp CTTCCEEECTTCCCCHHHHHHHHHH-HHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTT
T ss_pred CCCcCEEECCCCCCchhhHHHHHHH-HhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCcc
Confidence 99999999999999875 5544 5 448999999999999998 465432 1 23445667799998863
|
| >1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.36 E-value=1.1e-12 Score=131.46 Aligned_cols=127 Identities=20% Similarity=0.297 Sum_probs=108.3
Q ss_pred CCeEEEEeCCCCCcccCcchhcCCccCceeecccCcccCCCCcCc-ccccccccccccceecCCCCCCcCCCCCCcEEEc
Q 042825 97 GQVTNIELQDQNRKGTVPPILKKLSSMAVMYLENNQLRGPIPSLV-GSLEFFSAYEANISGTIPDFIGTDTFPQLSYLDL 175 (631)
Q Consensus 97 ~~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~L~~N~l~g~lP~~~-~~L~~L~l~~n~l~g~ip~~~~~~~l~~L~~L~L 175 (631)
.+++.|+|++|.+++ +|+ +.++++|++|+|++|++++ +|... .+|+.|++++|++++ +| .+. .+++|+.|+|
T Consensus 63 ~~L~~L~L~~N~i~~-~~~-l~~l~~L~~L~L~~N~l~~-l~~~~~~~L~~L~L~~N~l~~-~~-~l~--~l~~L~~L~L 135 (263)
T 1xeu_A 63 TNLKELHLSHNQISD-LSP-LKDLTKLEELSVNRNRLKN-LNGIPSACLSRLFLDNNELRD-TD-SLI--HLKNLEILSI 135 (263)
T ss_dssp TTCCEEECCSSCCCC-CGG-GTTCSSCCEEECCSSCCSC-CTTCCCSSCCEEECCSSCCSB-SG-GGT--TCTTCCEEEC
T ss_pred CCCCEEECCCCccCC-Chh-hccCCCCCEEECCCCccCC-cCccccCcccEEEccCCccCC-Ch-hhc--CcccccEEEC
Confidence 579999999999996 455 9999999999999999996 44433 599999999999996 44 466 8999999999
Q ss_pred cCCcccccCCCCCCCCccCcCCCCCCCEEEeecCcCcccCChhhccCCCCCCEEEccCCCCcccCCC
Q 042825 176 GNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNNLLQGPTPR 242 (631)
Q Consensus 176 s~N~l~g~iP~~~~~~~~~~~~l~~L~~L~L~~N~l~g~iP~~~~~~l~~L~~L~ls~N~l~g~~p~ 242 (631)
++|+++ .+| . ++.+++|++|+|++|++++. + .+..+++|+.|++++|.+++....
T Consensus 136 s~N~i~-~~~-~-------l~~l~~L~~L~L~~N~i~~~-~--~l~~l~~L~~L~l~~N~~~~~~~~ 190 (263)
T 1xeu_A 136 RNNKLK-SIV-M-------LGFLSKLEVLDLHGNEITNT-G--GLTRLKKVNWIDLTGQKCVNEPVK 190 (263)
T ss_dssp TTSCCC-BCG-G-------GGGCTTCCEEECTTSCCCBC-T--TSTTCCCCCEEEEEEEEEECCCEE
T ss_pred CCCcCC-CCh-H-------HccCCCCCEEECCCCcCcch-H--HhccCCCCCEEeCCCCcccCCccc
Confidence 999999 455 2 56899999999999999965 3 488999999999999999887443
|
| >1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4 | Back alignment and structure |
|---|
Probab=99.35 E-value=4.7e-13 Score=125.57 Aligned_cols=114 Identities=18% Similarity=0.155 Sum_probs=94.8
Q ss_pred chhcCCccCceeecccCcccCCCCcCcc---cccccccccccceecCCCCCCcCCCCCCcEEEccCCcccccCCCCCCCC
Q 042825 115 PILKKLSSMAVMYLENNQLRGPIPSLVG---SLEFFSAYEANISGTIPDFIGTDTFPQLSYLDLGNNNLQGTIPSSFGMP 191 (631)
Q Consensus 115 ~~~~~l~~L~~L~L~~N~l~g~lP~~~~---~L~~L~l~~n~l~g~ip~~~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~~ 191 (631)
+.+.++.+|+.|+|++|+++ .+|.... +|+.|++++|++++. ..+. .+++|++|+|++|+++ .+|+.+
T Consensus 13 ~~~~~~~~L~~L~l~~n~l~-~i~~~~~~~~~L~~L~Ls~N~l~~~--~~l~--~l~~L~~L~Ls~N~l~-~~~~~~--- 83 (176)
T 1a9n_A 13 AQYTNAVRDRELDLRGYKIP-VIENLGATLDQFDAIDFSDNEIRKL--DGFP--LLRRLKTLLVNNNRIC-RIGEGL--- 83 (176)
T ss_dssp CEEECTTSCEEEECTTSCCC-SCCCGGGGTTCCSEEECCSSCCCEE--CCCC--CCSSCCEEECCSSCCC-EECSCH---
T ss_pred HhcCCcCCceEEEeeCCCCc-hhHHhhhcCCCCCEEECCCCCCCcc--cccc--cCCCCCEEECCCCccc-ccCcch---
Confidence 34678899999999999999 5665322 899999999999975 5676 8999999999999999 566543
Q ss_pred ccCcCCCCCCCEEEeecCcCcccCCh-hhccCCCCCCEEEccCCCCcccCC
Q 042825 192 FADISNLSTLEDLSLGHNKLTGIFPV-SSFNNHPKLTTLNLTNNLLQGPTP 241 (631)
Q Consensus 192 ~~~~~~l~~L~~L~L~~N~l~g~iP~-~~~~~l~~L~~L~ls~N~l~g~~p 241 (631)
+.++++|++|+|++|+++ .+|. ..+..+++|+.|++++|.++...+
T Consensus 84 ---~~~l~~L~~L~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~~~~~ 130 (176)
T 1a9n_A 84 ---DQALPDLTELILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVTNKKH 130 (176)
T ss_dssp ---HHHCTTCCEEECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGGGSTT
T ss_pred ---hhcCCCCCEEECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCCCcHh
Confidence 358999999999999997 6775 248899999999999999986543
|
| >2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus} | Back alignment and structure |
|---|
Probab=99.32 E-value=6.2e-12 Score=117.73 Aligned_cols=88 Identities=25% Similarity=0.431 Sum_probs=72.6
Q ss_pred CCeEEEEeCCCCCcccCcchhcCCccCceeecccCcccCCCCcCcccccccccccccceecCCCCCCcCCCCCCcEEEcc
Q 042825 97 GQVTNIELQDQNRKGTVPPILKKLSSMAVMYLENNQLRGPIPSLVGSLEFFSAYEANISGTIPDFIGTDTFPQLSYLDLG 176 (631)
Q Consensus 97 ~~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~L~~N~l~g~lP~~~~~L~~L~l~~n~l~g~ip~~~~~~~l~~L~~L~Ls 176 (631)
.+++.|+|++|.+++..|..|.++++|++|+|++|+|++ +| +..+. .+++|++|+|+
T Consensus 33 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-i~--------------------~~~~~--~l~~L~~L~L~ 89 (174)
T 2r9u_A 33 TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTA-IP--------------------TGVFD--KLTQLTQLDLN 89 (174)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCC-CC--------------------TTTTT--TCTTCCEEECC
T ss_pred CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCc-cC--------------------hhHhC--CcchhhEEECC
Confidence 478999999999998888899999999999999999984 22 12234 78899999999
Q ss_pred CCcccccCCCCCCCCccCcCCCCCCCEEEeecCcCccc
Q 042825 177 NNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGI 214 (631)
Q Consensus 177 ~N~l~g~iP~~~~~~~~~~~~l~~L~~L~L~~N~l~g~ 214 (631)
+|+|+ .+|+.. +.++++|++|+|++|.++..
T Consensus 90 ~N~l~-~l~~~~------~~~l~~L~~L~L~~N~~~c~ 120 (174)
T 2r9u_A 90 DNHLK-SIPRGA------FDNLKSLTHIYLYNNPWDCE 120 (174)
T ss_dssp SSCCC-CCCTTT------TTTCTTCSEEECCSSCBCTT
T ss_pred CCccc-eeCHHH------hccccCCCEEEeCCCCcccc
Confidence 99999 566542 45899999999999999843
|
| >3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D | Back alignment and structure |
|---|
Probab=99.32 E-value=3.8e-12 Score=118.69 Aligned_cols=105 Identities=22% Similarity=0.336 Sum_probs=87.9
Q ss_pred EEEEeCCCCCcccCcchhcCCccCceeecccCcccCCCCcCcc---cccccccccccceecCCCCCCcCCCCCCcEEEcc
Q 042825 100 TNIELQDQNRKGTVPPILKKLSSMAVMYLENNQLRGPIPSLVG---SLEFFSAYEANISGTIPDFIGTDTFPQLSYLDLG 176 (631)
Q Consensus 100 ~~l~l~~n~l~g~ip~~~~~l~~L~~L~L~~N~l~g~lP~~~~---~L~~L~l~~n~l~g~ip~~~~~~~l~~L~~L~Ls 176 (631)
+.+++++|.++ .+|..+. ++|++|+|++|+|++..|..+. +|+.|+|++|++++..|..+. .+++|++|+|+
T Consensus 12 ~~l~~s~n~l~-~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~--~l~~L~~L~L~ 86 (170)
T 3g39_A 12 TTVDCSGKSLA-SVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFD--KLTQLTQLSLN 86 (170)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTT--TCTTCCEEECC
T ss_pred CEEEeCCCCcC-ccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhcc--CCCCCCEEECC
Confidence 56888889998 5887664 8899999999999987787665 899999999999976666666 89999999999
Q ss_pred CCcccccCCCCCCCCccCcCCCCCCCEEEeecCcCcccCC
Q 042825 177 NNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFP 216 (631)
Q Consensus 177 ~N~l~g~iP~~~~~~~~~~~~l~~L~~L~L~~N~l~g~iP 216 (631)
+|+|+ .+|+.. +.++++|++|+|++|.++...+
T Consensus 87 ~N~l~-~~~~~~------~~~l~~L~~L~L~~N~~~c~c~ 119 (170)
T 3g39_A 87 DNQLK-SIPRGA------FDNLKSLTHIWLLNNPWDCACS 119 (170)
T ss_dssp SSCCC-CCCTTT------TTTCTTCCEEECCSSCBCTTBG
T ss_pred CCccC-EeCHHH------hcCCCCCCEEEeCCCCCCCCch
Confidence 99999 555432 4589999999999999986544
|
| >2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7 | Back alignment and structure |
|---|
Probab=99.26 E-value=1e-11 Score=129.47 Aligned_cols=108 Identities=19% Similarity=0.237 Sum_probs=72.1
Q ss_pred CCccceeeCCCCCeEEEEeCCC-CCcccCcchhcCCccCceeeccc-CcccCCCCcCcccccccccccccceecCCCCCC
Q 042825 86 CQWSHVICSDDGQVTNIELQDQ-NRKGTVPPILKKLSSMAVMYLEN-NQLRGPIPSLVGSLEFFSAYEANISGTIPDFIG 163 (631)
Q Consensus 86 C~w~gv~C~~~~~l~~l~l~~n-~l~g~ip~~~~~l~~L~~L~L~~-N~l~g~lP~~~~~L~~L~l~~n~l~g~ip~~~~ 163 (631)
|.|..|.| +++ +|+ .||. |..+++|+.|+|++ |+|++..| ..|+
T Consensus 8 C~~~~v~~-----------~~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~---------------------~~~~ 53 (347)
T 2ifg_A 8 HGSSGLRC-----------TRDGALD-SLHH-LPGAENLTELYIENQQHLQHLEL---------------------RDLR 53 (347)
T ss_dssp SSSSCEEC-----------CSSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECG---------------------GGSC
T ss_pred ccCCEEEc-----------CCCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcCh---------------------hHhc
Confidence 66666666 444 677 4888 99999999999986 88874332 3344
Q ss_pred cCCCCCCcEEEccCCcccccCCCCCCCCccCcCCCCCCCEEEeecCcCcccCChhhccCCCCCCEEEccCCCCcc
Q 042825 164 TDTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNNLLQG 238 (631)
Q Consensus 164 ~~~l~~L~~L~Ls~N~l~g~iP~~~~~~~~~~~~l~~L~~L~L~~N~l~g~iP~~~~~~l~~L~~L~ls~N~l~g 238 (631)
.|++|+.|+|++|+|+|..|.. |++|++|+.|+|++|+|+ .+|...|..++ |+.|+|++|.|..
T Consensus 54 --~l~~L~~L~l~~N~l~~~~~~~-------~~~l~~L~~L~l~~N~l~-~~~~~~~~~~~-L~~l~l~~N~~~c 117 (347)
T 2ifg_A 54 --GLGELRNLTIVKSGLRFVAPDA-------FHFTPRLSRLNLSFNALE-SLSWKTVQGLS-LQELVLSGNPLHC 117 (347)
T ss_dssp --SCCCCSEEECCSSCCCEECTTG-------GGSCSCCCEEECCSSCCS-CCCSTTTCSCC-CCEEECCSSCCCC
T ss_pred --cccCCCEEECCCCccceeCHHH-------hcCCcCCCEEeCCCCccc-eeCHHHcccCC-ceEEEeeCCCccC
Confidence 5667777777777777544433 346777777777777777 34544454444 7777777777654
|
| >2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A | Back alignment and structure |
|---|
Probab=99.22 E-value=2.6e-13 Score=140.80 Aligned_cols=152 Identities=17% Similarity=0.259 Sum_probs=99.7
Q ss_pred CCeEEEEeCCCCCccc-CcchhcCCccCceeecccCcccCCCCcCcc---cccccccccc-cceec-CCCCCCcCCCCCC
Q 042825 97 GQVTNIELQDQNRKGT-VPPILKKLSSMAVMYLENNQLRGPIPSLVG---SLEFFSAYEA-NISGT-IPDFIGTDTFPQL 170 (631)
Q Consensus 97 ~~l~~l~l~~n~l~g~-ip~~~~~l~~L~~L~L~~N~l~g~lP~~~~---~L~~L~l~~n-~l~g~-ip~~~~~~~l~~L 170 (631)
.+++.|+|++|.+++. +|..+..+++|++|+|++|.+++..|..++ +|+.|++++| .+++. +|..+. .+++|
T Consensus 93 ~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~--~~~~L 170 (336)
T 2ast_B 93 FRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLS--SCSRL 170 (336)
T ss_dssp BCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHH--HCTTC
T ss_pred CCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHh--cCCCC
Confidence 4677788888777765 777777788888888888877765555443 6777888877 56652 555555 67778
Q ss_pred cEEEccCC-ccccc-CCCCCCCCccCcCCCC-CCCEEEeecC--cCc-ccCChhhccCCCCCCEEEccCCC-CcccCC-C
Q 042825 171 SYLDLGNN-NLQGT-IPSSFGMPFADISNLS-TLEDLSLGHN--KLT-GIFPVSSFNNHPKLTTLNLTNNL-LQGPTP-R 242 (631)
Q Consensus 171 ~~L~Ls~N-~l~g~-iP~~~~~~~~~~~~l~-~L~~L~L~~N--~l~-g~iP~~~~~~l~~L~~L~ls~N~-l~g~~p-~ 242 (631)
++|+|++| .+++. +|.. +.+++ +|++|+|++| .++ +.+|.. +..+++|+.|++++|. +++..+ .
T Consensus 171 ~~L~l~~~~~l~~~~~~~~-------~~~l~~~L~~L~l~~~~~~~~~~~l~~~-~~~~~~L~~L~l~~~~~l~~~~~~~ 242 (336)
T 2ast_B 171 DELNLSWCFDFTEKHVQVA-------VAHVSETITQLNLSGYRKNLQKSDLSTL-VRRCPNLVHLDLSDSVMLKNDCFQE 242 (336)
T ss_dssp CEEECCCCTTCCHHHHHHH-------HHHSCTTCCEEECCSCGGGSCHHHHHHH-HHHCTTCSEEECTTCTTCCGGGGGG
T ss_pred CEEcCCCCCCcChHHHHHH-------HHhcccCCCEEEeCCCcccCCHHHHHHH-HhhCCCCCEEeCCCCCcCCHHHHHH
Confidence 88888887 77643 3432 34677 7888888877 454 455543 6677778888888777 554433 3
Q ss_pred CCCCCceEEeecCCCc
Q 042825 243 FNNSKLTVDMRTGSNC 258 (631)
Q Consensus 243 ~~~~~~~~~l~~~~n~ 258 (631)
+........+++++|.
T Consensus 243 l~~l~~L~~L~l~~~~ 258 (336)
T 2ast_B 243 FFQLNYLQHLSLSRCY 258 (336)
T ss_dssp GGGCTTCCEEECTTCT
T ss_pred HhCCCCCCEeeCCCCC
Confidence 3333344455566664
|
| >2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A | Back alignment and structure |
|---|
Probab=99.22 E-value=3e-13 Score=140.35 Aligned_cols=138 Identities=14% Similarity=0.265 Sum_probs=67.9
Q ss_pred CccceeeCCCCCeEEEEeCCCCCcccCcchhcCC--ccCceeecccCcccCCCCcCcc--cccccccccccceec-CCCC
Q 042825 87 QWSHVICSDDGQVTNIELQDQNRKGTVPPILKKL--SSMAVMYLENNQLRGPIPSLVG--SLEFFSAYEANISGT-IPDF 161 (631)
Q Consensus 87 ~w~gv~C~~~~~l~~l~l~~n~l~g~ip~~~~~l--~~L~~L~L~~N~l~g~lP~~~~--~L~~L~l~~n~l~g~-ip~~ 161 (631)
.|.++.|+ ...++.|+++++.+. |..+..+ ++|+.|++++|.+++..|..+. +|+.|++++|++++. +|..
T Consensus 38 ~W~~~~~~-~~~~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~~ 113 (336)
T 2ast_B 38 RWYRLASD-ESLWQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAEHFSPFRVQHMDLSNSVIEVSTLHGI 113 (336)
T ss_dssp HHHHHHTC-STTSSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCSCCCCBCCCEEECTTCEECHHHHHHH
T ss_pred HHHHHhcC-chhheeeccccccCC---HHHHHhhhhccceEEEcCCccccccchhhccCCCCCEEEccCCCcCHHHHHHH
Confidence 36665553 223455555555544 3334444 4555555555555554444322 555555555555443 4444
Q ss_pred CCcCCCCCCcEEEccCCcccccCCCCCCCCccCcCCCCCCCEEEeecC-cCccc-CChhhccCCCCCCEEEccCC-CCcc
Q 042825 162 IGTDTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHN-KLTGI-FPVSSFNNHPKLTTLNLTNN-LLQG 238 (631)
Q Consensus 162 ~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~~~~~~~~l~~L~~L~L~~N-~l~g~-iP~~~~~~l~~L~~L~ls~N-~l~g 238 (631)
+. .+++|++|+|++|.+++.+|..+ +++++|++|+|++| .+++. +|. .+..+++|++|++++| .+++
T Consensus 114 ~~--~~~~L~~L~L~~~~l~~~~~~~l-------~~~~~L~~L~L~~~~~l~~~~l~~-~~~~~~~L~~L~l~~~~~l~~ 183 (336)
T 2ast_B 114 LS--QCSKLQNLSLEGLRLSDPIVNTL-------AKNSNLVRLNLSGCSGFSEFALQT-LLSSCSRLDELNLSWCFDFTE 183 (336)
T ss_dssp HT--TBCCCSEEECTTCBCCHHHHHHH-------TTCTTCSEEECTTCBSCCHHHHHH-HHHHCTTCCEEECCCCTTCCH
T ss_pred Hh--hCCCCCEEeCcCcccCHHHHHHH-------hcCCCCCEEECCCCCCCCHHHHHH-HHhcCCCCCEEcCCCCCCcCh
Confidence 44 45555555555555554444332 24555555555555 44432 332 2444555555555555 4543
|
| >3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=99.18 E-value=1.5e-12 Score=136.85 Aligned_cols=140 Identities=21% Similarity=0.205 Sum_probs=71.1
Q ss_pred CeEEEEeCCCCCcccCc----chhcCCc-cCceeecccCcccCCCCcCc--------ccccccccccccceecCCCCCCc
Q 042825 98 QVTNIELQDQNRKGTVP----PILKKLS-SMAVMYLENNQLRGPIPSLV--------GSLEFFSAYEANISGTIPDFIGT 164 (631)
Q Consensus 98 ~l~~l~l~~n~l~g~ip----~~~~~l~-~L~~L~L~~N~l~g~lP~~~--------~~L~~L~l~~n~l~g~ip~~~~~ 164 (631)
+++.|+|++|.+++.-+ ..+.+++ +|++|+|++|.+++..+..+ .+|+.|++++|++++..+..+..
T Consensus 23 ~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~ 102 (362)
T 3goz_A 23 GVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANVTSLNLSGNFLSYKSSDELVK 102 (362)
T ss_dssp TCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHH
T ss_pred CceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCccEEECcCCcCChHHHHHHHH
Confidence 36666666666664444 4555565 66666666666665443322 35666666666666544433220
Q ss_pred --CCC-CCCcEEEccCCcccccCCCCCCCCccCcCC-CCCCCEEEeecCcCccc----CChhhccCCC-CCCEEEccCCC
Q 042825 165 --DTF-PQLSYLDLGNNNLQGTIPSSFGMPFADISN-LSTLEDLSLGHNKLTGI----FPVSSFNNHP-KLTTLNLTNNL 235 (631)
Q Consensus 165 --~~l-~~L~~L~Ls~N~l~g~iP~~~~~~~~~~~~-l~~L~~L~L~~N~l~g~----iP~~~~~~l~-~L~~L~ls~N~ 235 (631)
..+ ++|++|+|++|++++..+..+. ..+.. .++|++|+|++|++++. ++.. +..++ +|+.|+|++|.
T Consensus 103 ~l~~~~~~L~~L~Ls~N~l~~~~~~~l~---~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~-l~~~~~~L~~L~Ls~n~ 178 (362)
T 3goz_A 103 TLAAIPFTITVLDLGWNDFSSKSSSEFK---QAFSNLPASITSLNLRGNDLGIKSSDELIQI-LAAIPANVNSLNLRGNN 178 (362)
T ss_dssp HHHTSCTTCCEEECCSSCGGGSCHHHHH---HHHTTSCTTCCEEECTTSCGGGSCHHHHHHH-HHTSCTTCCEEECTTSC
T ss_pred HHHhCCCCccEEECcCCcCCcHHHHHHH---HHHHhCCCceeEEEccCCcCCHHHHHHHHHH-HhcCCccccEeeecCCC
Confidence 022 5666666666666533222111 00112 24666666666666532 2211 23333 56666666666
Q ss_pred CcccCC
Q 042825 236 LQGPTP 241 (631)
Q Consensus 236 l~g~~p 241 (631)
+++..+
T Consensus 179 l~~~~~ 184 (362)
T 3goz_A 179 LASKNC 184 (362)
T ss_dssp GGGSCH
T ss_pred CchhhH
Confidence 655443
|
| >1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A | Back alignment and structure |
|---|
Probab=99.13 E-value=3e-13 Score=129.43 Aligned_cols=132 Identities=20% Similarity=0.259 Sum_probs=108.5
Q ss_pred hcCCccCceeecccCcccCCCCc------Ccc---cccccccccccceecCCCCCCcCCCCCCcEEEccCCcccccCCCC
Q 042825 117 LKKLSSMAVMYLENNQLRGPIPS------LVG---SLEFFSAYEANISGTIPDFIGTDTFPQLSYLDLGNNNLQGTIPSS 187 (631)
Q Consensus 117 ~~~l~~L~~L~L~~N~l~g~lP~------~~~---~L~~L~l~~n~l~g~ip~~~~~~~l~~L~~L~Ls~N~l~g~iP~~ 187 (631)
+.....++.++++.|.|+|.+|. .+. +|+.|++++|++++ +| .+. .+++|++|+|++|+++ .+|..
T Consensus 14 ~~~~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~--~l~~L~~L~l~~n~l~-~l~~~ 88 (198)
T 1ds9_A 14 FEERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLS--GMENLRILSLGRNLIK-KIENL 88 (198)
T ss_dssp HHHTTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHH--HHTTCCEEEEEEEEEC-SCSSH
T ss_pred HHhcccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccc--cCCCCCEEECCCCCcc-cccch
Confidence 66778899999999999999886 443 89999999999997 78 776 7999999999999999 78864
Q ss_pred CCCCccCcCCCCCCCEEEeecCcCcccCChhhccCCCCCCEEEccCCCCcccCC--CCCCCCceEEeecCCCcccCCC
Q 042825 188 FGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNNLLQGPTP--RFNNSKLTVDMRTGSNCFCLDD 263 (631)
Q Consensus 188 ~~~~~~~~~~l~~L~~L~L~~N~l~g~iP~~~~~~l~~L~~L~ls~N~l~g~~p--~~~~~~~~~~l~~~~n~~~~~~ 263 (631)
+ ..+++|++|+|++|++++ +| . +..+++|+.|++++|++++..+ .+........+++++|.+++..
T Consensus 89 ~-------~~~~~L~~L~L~~N~l~~-l~-~-~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~ 156 (198)
T 1ds9_A 89 D-------AVADTLEELWISYNQIAS-LS-G-IEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDY 156 (198)
T ss_dssp H-------HHHHHCSEEEEEEEECCC-HH-H-HHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHH
T ss_pred h-------hcCCcCCEEECcCCcCCc-CC-c-cccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCcccccc
Confidence 3 467999999999999995 66 4 8889999999999999986432 3444444556677999987643
|
| >3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=99.11 E-value=5e-12 Score=132.84 Aligned_cols=157 Identities=17% Similarity=0.123 Sum_probs=116.1
Q ss_pred EEEeCCCCCcccCcchhcCCccCceeecccCcccCCCC----cCc---c-cccccccccccceecCCCCCCcCCC-----
Q 042825 101 NIELQDQNRKGTVPPILKKLSSMAVMYLENNQLRGPIP----SLV---G-SLEFFSAYEANISGTIPDFIGTDTF----- 167 (631)
Q Consensus 101 ~l~l~~n~l~g~ip~~~~~l~~L~~L~L~~N~l~g~lP----~~~---~-~L~~L~l~~n~l~g~ip~~~~~~~l----- 167 (631)
.++|+.|+++|.+|..+....+|++|+|++|.+++.-+ ..+ . +|+.|++++|++++..+..+. .+
T Consensus 2 ~~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~--~~l~~~~ 79 (362)
T 3goz_A 2 NYKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELV--QILAAIP 79 (362)
T ss_dssp EEECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHH--HHHHTSC
T ss_pred ccccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHH--HHHhccC
Confidence 46889999999999988888889999999999996555 333 3 799999999999987676665 33
Q ss_pred CCCcEEEccCCcccccCCCCCCCCccCcCCC-CCCCEEEeecCcCcccCChhh---ccC-CCCCCEEEccCCCCcccCCC
Q 042825 168 PQLSYLDLGNNNLQGTIPSSFGMPFADISNL-STLEDLSLGHNKLTGIFPVSS---FNN-HPKLTTLNLTNNLLQGPTPR 242 (631)
Q Consensus 168 ~~L~~L~Ls~N~l~g~iP~~~~~~~~~~~~l-~~L~~L~L~~N~l~g~iP~~~---~~~-l~~L~~L~ls~N~l~g~~p~ 242 (631)
++|++|+|++|++++..+..+. ..+..+ ++|++|+|++|++++..+... +.. .++|++|+|++|.+++..+.
T Consensus 80 ~~L~~L~Ls~n~l~~~~~~~l~---~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~ 156 (362)
T 3goz_A 80 ANVTSLNLSGNFLSYKSSDELV---KTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSD 156 (362)
T ss_dssp TTCCEEECCSSCGGGSCHHHHH---HHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHH
T ss_pred CCccEEECcCCcCChHHHHHHH---HHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHH
Confidence 8999999999999965554332 013344 899999999999985444221 233 36999999999999854322
Q ss_pred C-----CCC-CceEEeecCCCcccCC
Q 042825 243 F-----NNS-KLTVDMRTGSNCFCLD 262 (631)
Q Consensus 243 ~-----~~~-~~~~~l~~~~n~~~~~ 262 (631)
. ... .....+++++|.+.+.
T Consensus 157 ~l~~~l~~~~~~L~~L~Ls~n~l~~~ 182 (362)
T 3goz_A 157 ELIQILAAIPANVNSLNLRGNNLASK 182 (362)
T ss_dssp HHHHHHHTSCTTCCEEECTTSCGGGS
T ss_pred HHHHHHhcCCccccEeeecCCCCchh
Confidence 1 111 1344567799988763
|
| >2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7 | Back alignment and structure |
|---|
Probab=99.10 E-value=1.6e-10 Score=120.49 Aligned_cols=101 Identities=19% Similarity=0.229 Sum_probs=80.1
Q ss_pred ccccc-cceecCCCCCCcCCCCCCcEEEccC-CcccccCCCCCCCCccCcCCCCCCCEEEeecCcCcccCChhhccCCCC
Q 042825 148 SAYEA-NISGTIPDFIGTDTFPQLSYLDLGN-NNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPK 225 (631)
Q Consensus 148 ~l~~n-~l~g~ip~~~~~~~l~~L~~L~Ls~-N~l~g~iP~~~~~~~~~~~~l~~L~~L~L~~N~l~g~iP~~~~~~l~~ 225 (631)
+++++ +|+ .||. +. .+++|+.|+|++ |+|++..|.. |++|++|+.|+|++|+|+|..|. .|..+++
T Consensus 14 ~~~~~n~l~-~ip~-l~--~~~~L~~L~l~~~n~l~~~~~~~-------~~~l~~L~~L~l~~N~l~~~~~~-~~~~l~~ 81 (347)
T 2ifg_A 14 RCTRDGALD-SLHH-LP--GAENLTELYIENQQHLQHLELRD-------LRGLGELRNLTIVKSGLRFVAPD-AFHFTPR 81 (347)
T ss_dssp ECCSSCCCT-TTTT-SC--SCSCCSEEECCSCSSCCEECGGG-------SCSCCCCSEEECCSSCCCEECTT-GGGSCSC
T ss_pred EcCCCCCCC-ccCC-CC--CCCCeeEEEccCCCCCCCcChhH-------hccccCCCEEECCCCccceeCHH-HhcCCcC
Confidence 44444 444 4787 77 788999999996 9999544444 45999999999999999976664 5999999
Q ss_pred CCEEEccCCCCcccCCCCCCCCceEEeecCCCccc
Q 042825 226 LTTLNLTNNLLQGPTPRFNNSKLTVDMRTGSNCFC 260 (631)
Q Consensus 226 L~~L~ls~N~l~g~~p~~~~~~~~~~l~~~~n~~~ 260 (631)
|+.|+|++|+|++.+|..+....+..|++.+|.+.
T Consensus 82 L~~L~l~~N~l~~~~~~~~~~~~L~~l~l~~N~~~ 116 (347)
T 2ifg_A 82 LSRLNLSFNALESLSWKTVQGLSLQELVLSGNPLH 116 (347)
T ss_dssp CCEEECCSSCCSCCCSTTTCSCCCCEEECCSSCCC
T ss_pred CCEEeCCCCccceeCHHHcccCCceEEEeeCCCcc
Confidence 99999999999998887665534556778888875
|
| >1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I | Back alignment and structure |
|---|
Probab=99.08 E-value=4.3e-12 Score=137.53 Aligned_cols=135 Identities=17% Similarity=0.194 Sum_probs=69.0
Q ss_pred CeEEEEeCCCCCccc----CcchhcCCccCceeecccCcccCCCCcCc--------ccccccccccccceec----CCCC
Q 042825 98 QVTNIELQDQNRKGT----VPPILKKLSSMAVMYLENNQLRGPIPSLV--------GSLEFFSAYEANISGT----IPDF 161 (631)
Q Consensus 98 ~l~~l~l~~n~l~g~----ip~~~~~l~~L~~L~L~~N~l~g~lP~~~--------~~L~~L~l~~n~l~g~----ip~~ 161 (631)
+++.|+|++|.+++. ++..+.++++|++|+|++|.+++..+..+ .+|+.|++++|++++. +|..
T Consensus 257 ~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~ 336 (461)
T 1z7x_W 257 RLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSV 336 (461)
T ss_dssp CCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHH
T ss_pred CceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHHHH
Confidence 556666666666543 45555556666666666666543211111 2566666666665543 3333
Q ss_pred CCcCCCCCCcEEEccCCcccccCCCCCCCCccCcC-CCCCCCEEEeecCcCcc----cCChhhccCCCCCCEEEccCCCC
Q 042825 162 IGTDTFPQLSYLDLGNNNLQGTIPSSFGMPFADIS-NLSTLEDLSLGHNKLTG----IFPVSSFNNHPKLTTLNLTNNLL 236 (631)
Q Consensus 162 ~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~~~~~~~-~l~~L~~L~L~~N~l~g----~iP~~~~~~l~~L~~L~ls~N~l 236 (631)
+. .+++|++|||++|.+++..+..+. ..+. ..++|++|+|++|++++ .+|.. +..+++|++|+|++|.+
T Consensus 337 l~--~~~~L~~L~Ls~n~i~~~~~~~l~---~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~-l~~~~~L~~L~l~~N~i 410 (461)
T 1z7x_W 337 LA--QNRFLLELQISNNRLEDAGVRELC---QGLGQPGSVLRVLWLADCDVSDSSCSSLAAT-LLANHSLRELDLSNNCL 410 (461)
T ss_dssp HH--HCSSCCEEECCSSBCHHHHHHHHH---HHHTSTTCCCCEEECTTSCCCHHHHHHHHHH-HHHCCCCCEEECCSSSC
T ss_pred Hh--hCCCccEEEccCCccccccHHHHH---HHHcCCCCceEEEECCCCCCChhhHHHHHHH-HHhCCCccEEECCCCCC
Confidence 33 445666666666665533222111 0000 13456666666666654 45533 45556666666666665
Q ss_pred cc
Q 042825 237 QG 238 (631)
Q Consensus 237 ~g 238 (631)
++
T Consensus 411 ~~ 412 (461)
T 1z7x_W 411 GD 412 (461)
T ss_dssp CH
T ss_pred CH
Confidence 54
|
| >3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A* | Back alignment and structure |
|---|
Probab=99.02 E-value=5.1e-11 Score=131.73 Aligned_cols=138 Identities=16% Similarity=0.136 Sum_probs=89.0
Q ss_pred ccceeecCCCceEEEEEEecCCcEEEEEEEecCCCCH------HHHHHHHHHHHHHhc----------------------
Q 042825 421 SEENRLGRGGVGTVYKGELKDGTEVGVKRMELGSVTE------QGIAQFESEITVLTK---------------------- 472 (631)
Q Consensus 421 ~~~~~iG~G~fg~Vyk~~~~~g~~vAvK~l~~~~~~~------~~~~~~~~Ei~~l~~---------------------- 472 (631)
...++||+|+||+||+|.. .++.+|+|+........ ...++|.+|++++.+
T Consensus 339 ~~~~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lV 417 (540)
T 3en9_A 339 IPEHLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIM 417 (540)
T ss_dssp ---------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEE
T ss_pred CCCCEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEE
Confidence 3467999999999999954 47889999876543321 124568999999876
Q ss_pred ------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC----------------------CCcEEEeeccccccCCCCc
Q 042825 473 ------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG----------------------DDMRVADFGLVRLVPENGK 524 (631)
Q Consensus 473 ------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g----------------------~~~kl~DFGla~~~~~~~~ 524 (631)
++|.+++.. +..++.+++++ ..+||+|||+++.......
T Consensus 418 mE~~~ggsL~~~l~~-------------~~~i~~qi~~aL~~LH~~gIiHrDiKp~NILl~~~~kL~DFGla~~~~~~~~ 484 (540)
T 3en9_A 418 MSYINGKLAKDVIED-------------NLDIAYKIGEIVGKLHKNDVIHNDLTTSNFIFDKDLYIIDFGLGKISNLDED 484 (540)
T ss_dssp EECCCSEEHHHHSTT-------------CTHHHHHHHHHHHHHHHTTEECTTCCTTSEEESSSEEECCCTTCEECCCHHH
T ss_pred EECCCCCCHHHHHHH-------------HHHHHHHHHHHHHHHHHCcCccCCCCHHHEEECCeEEEEECccCEECCCccc
Confidence 333333321 22333333332 2578999999998742211
Q ss_pred cc-----cccccccCccccccccccc--CCCCchhhHHHHHHHHHHHHcCCCCCC
Q 042825 525 HS-----ILTKVAGTFGYLAPEYIVT--GRITAKVDVYSFGMILMDLITGRKVVD 572 (631)
Q Consensus 525 ~~-----~~~~~~gt~~Y~aPE~~~~--~~~~~k~DVwS~GvvL~ElltG~~P~~ 572 (631)
.. ......||+.|||||++.. ..|+.++|+||..+-.+|.+.++.+|.
T Consensus 485 ~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY~ 539 (540)
T 3en9_A 485 KAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARYV 539 (540)
T ss_dssp HHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCCC
T ss_pred cccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccccC
Confidence 11 1245789999999999976 568889999999999999988887764
|
| >4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A* | Back alignment and structure |
|---|
Probab=99.00 E-value=2.3e-11 Score=135.33 Aligned_cols=135 Identities=17% Similarity=0.099 Sum_probs=73.6
Q ss_pred eecCCCceEEEEEEe-cCCcEEEEEEEecCCC--------CHHHHHHHHHHHHHHhc-----------------------
Q 042825 425 RLGRGGVGTVYKGEL-KDGTEVGVKRMELGSV--------TEQGIAQFESEITVLTK----------------------- 472 (631)
Q Consensus 425 ~iG~G~fg~Vyk~~~-~~g~~vAvK~l~~~~~--------~~~~~~~~~~Ei~~l~~----------------------- 472 (631)
..+.|+.|.+++++. --|+.+|||.+..... .+...++|.+|+++|.+
T Consensus 241 ~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLV 320 (569)
T 4azs_A 241 QPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLV 320 (569)
T ss_dssp C-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEE
T ss_pred ccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEE
Confidence 456677777766552 2489999999976421 12345679999999987
Q ss_pred ------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCC
Q 042825 473 ------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPEN 522 (631)
Q Consensus 473 ------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~ 522 (631)
++|.+.+.. ...++.. +|+.+++.| +.+||+|||+|+....+
T Consensus 321 MEyv~G~~L~d~i~~-----~~~l~~~---~I~~QIl~AL~ylH~~GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~ 392 (569)
T 4azs_A 321 MEKLPGRLLSDMLAA-----GEEIDRE---KILGSLLRSLAALEKQGFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQD 392 (569)
T ss_dssp EECCCSEEHHHHHHT-----TCCCCHH---HHHHHHHHHHHHHHHTTCEESCCCGGGEEECTTSCEEECCCTTEESCC--
T ss_pred EecCCCCcHHHHHHh-----CCCCCHH---HHHHHHHHHHHHHHHCCceeccCchHhEEECCCCCEEEeecccCeeCCCC
Confidence 566666642 2344443 366666655 67899999999977432
Q ss_pred CccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCC
Q 042825 523 GKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKV 570 (631)
Q Consensus 523 ~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P 570 (631)
. ......+||++|||||++.+ .+..++|+||+|++++++.++..+
T Consensus 393 ~--~~~~t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~~~ 437 (569)
T 4azs_A 393 C--SWPTNLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPWSN 437 (569)
T ss_dssp ---CCSHHHHHHHHHHHHHHC------------------CCCCTTHHH
T ss_pred C--ccccCceechhhccHHHhCC-CCCCcccccccccchhhhccccch
Confidence 2 23455789999999999865 567789999999998877665443
|
| >1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I | Back alignment and structure |
|---|
Probab=98.93 E-value=2.4e-11 Score=131.63 Aligned_cols=158 Identities=18% Similarity=0.183 Sum_probs=110.7
Q ss_pred CeEEEEeCCCCCcc----cCcchhcCCccCceeecccCcccCCCCcC--------cccccccccccccceec----CCCC
Q 042825 98 QVTNIELQDQNRKG----TVPPILKKLSSMAVMYLENNQLRGPIPSL--------VGSLEFFSAYEANISGT----IPDF 161 (631)
Q Consensus 98 ~l~~l~l~~n~l~g----~ip~~~~~l~~L~~L~L~~N~l~g~lP~~--------~~~L~~L~l~~n~l~g~----ip~~ 161 (631)
+++.|+|++|.++. .+|..+..+++|++|+|++|.+++..+.. ..+|+.|++++|++++. ++..
T Consensus 86 ~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~ 165 (461)
T 1z7x_W 86 KIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLASV 165 (461)
T ss_dssp CCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHH
T ss_pred ceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHHHHHH
Confidence 68999999999983 67888999999999999999987543322 22699999999998863 3444
Q ss_pred CCcCCCCCCcEEEccCCcccccCCCCCCCCccCc-CCCCCCCEEEeecCcCccc----CChhhccCCCCCCEEEccCCCC
Q 042825 162 IGTDTFPQLSYLDLGNNNLQGTIPSSFGMPFADI-SNLSTLEDLSLGHNKLTGI----FPVSSFNNHPKLTTLNLTNNLL 236 (631)
Q Consensus 162 ~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~~~~~~-~~l~~L~~L~L~~N~l~g~----iP~~~~~~l~~L~~L~ls~N~l 236 (631)
+. .+++|++|+|++|.++...+..+. ..+ ..+++|++|+|++|++++. +|.. +..+++|+.|++++|.+
T Consensus 166 l~--~~~~L~~L~L~~n~i~~~~~~~l~---~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~-l~~~~~L~~L~Ls~n~l 239 (461)
T 1z7x_W 166 LR--AKPDFKELTVSNNDINEAGVRVLC---QGLKDSPCQLEALKLESCGVTSDNCRDLCGI-VASKASLRELALGSNKL 239 (461)
T ss_dssp HH--HCTTCCEEECCSSBCHHHHHHHHH---HHHHHSCCCCCEEECTTSCCBTTHHHHHHHH-HHHCTTCCEEECCSSBC
T ss_pred Hh--hCCCCCEEECcCCCcchHHHHHHH---HHHhcCCCCceEEEccCCCCcHHHHHHHHHH-HHhCCCccEEeccCCcC
Confidence 54 578999999999998754332221 000 1245889999999988853 5543 67788899999999988
Q ss_pred cccC-----CCCC-CCCceEEeecCCCcccC
Q 042825 237 QGPT-----PRFN-NSKLTVDMRTGSNCFCL 261 (631)
Q Consensus 237 ~g~~-----p~~~-~~~~~~~l~~~~n~~~~ 261 (631)
++.. +... .......+++++|.++.
T Consensus 240 ~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~ 270 (461)
T 1z7x_W 240 GDVGMAELCPGLLHPSSRLRTLWIWECGITA 270 (461)
T ss_dssp HHHHHHHHHHHHTSTTCCCCEEECTTSCCCH
T ss_pred ChHHHHHHHHHHhcCCCCceEEECcCCCCCH
Confidence 7531 1111 12234456667776654
|
| >3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.73 E-value=1.6e-10 Score=121.74 Aligned_cols=156 Identities=13% Similarity=0.089 Sum_probs=96.7
Q ss_pred CeEEEEeCCCCCcccCcchhcC-----CccCceeecccCcccCCCC----cCcccccccccccccceecCCCCCCc---C
Q 042825 98 QVTNIELQDQNRKGTVPPILKK-----LSSMAVMYLENNQLRGPIP----SLVGSLEFFSAYEANISGTIPDFIGT---D 165 (631)
Q Consensus 98 ~l~~l~l~~n~l~g~ip~~~~~-----l~~L~~L~L~~N~l~g~lP----~~~~~L~~L~l~~n~l~g~ip~~~~~---~ 165 (631)
.++.|+|++|.++..-...+.. ..+|+.|+|++|.|+..-. ..+.+|+.|+|++|+++..-...+.. .
T Consensus 73 ~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~~ 152 (372)
T 3un9_A 73 SLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLLH 152 (372)
T ss_dssp TCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHHS
T ss_pred hCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHHh
Confidence 5788888888887543333332 2688888888888864222 22337888888888876432222210 1
Q ss_pred CCCCCcEEEccCCccccc----CCCCCCCCccCcCCCCCCCEEEeecCcCccc----CChhhccCCCCCCEEEccCCCCc
Q 042825 166 TFPQLSYLDLGNNNLQGT----IPSSFGMPFADISNLSTLEDLSLGHNKLTGI----FPVSSFNNHPKLTTLNLTNNLLQ 237 (631)
Q Consensus 166 ~l~~L~~L~Ls~N~l~g~----iP~~~~~~~~~~~~l~~L~~L~L~~N~l~g~----iP~~~~~~l~~L~~L~ls~N~l~ 237 (631)
..++|+.|+|++|.|+.. ++.. +..+++|++|+|++|+|++. ++.. +...++|+.|+|++|.|+
T Consensus 153 ~~~~L~~L~Ls~n~l~~~~~~~l~~~-------L~~~~~L~~L~Ls~N~l~~~g~~~L~~~-L~~~~~L~~L~Ls~N~i~ 224 (372)
T 3un9_A 153 DQCQITTLRLSNNPLTAAGVAVLMEG-------LAGNTSVTHLSLLHTGLGDEGLELLAAQ-LDRNRQLQELNVAYNGAG 224 (372)
T ss_dssp TTCCCCEEECCSSCCHHHHHHHHHHH-------HHTCSSCCEEECTTSSCHHHHHHHHHHH-GGGCSCCCEEECCSSCCC
T ss_pred cCCccceeeCCCCCCChHHHHHHHHH-------HhcCCCcCEEeCCCCCCCcHHHHHHHHH-HhcCCCcCeEECCCCCCC
Confidence 346788889988888631 2211 34677888889988888742 2322 566678888999888886
Q ss_pred ccC----CC-CCCCCceEEeecCCCcccC
Q 042825 238 GPT----PR-FNNSKLTVDMRTGSNCFCL 261 (631)
Q Consensus 238 g~~----p~-~~~~~~~~~l~~~~n~~~~ 261 (631)
..- +. .........+++++|.+..
T Consensus 225 ~~g~~~l~~~L~~~~~L~~L~Ls~N~i~~ 253 (372)
T 3un9_A 225 DTAALALARAAREHPSLELLHLYFNELSS 253 (372)
T ss_dssp HHHHHHHHHHHHHCSSCCEEECTTSSCCH
T ss_pred HHHHHHHHHHHHhCCCCCEEeccCCCCCH
Confidence 531 11 0011223456678887653
|
| >3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.71 E-value=3.9e-10 Score=118.64 Aligned_cols=137 Identities=14% Similarity=0.099 Sum_probs=98.3
Q ss_pred CCeEEEEeCCCCCcccCcchh-cCCccCceeecccCcccCCCCcC--------ccccccccccccccee----cCCCCCC
Q 042825 97 GQVTNIELQDQNRKGTVPPIL-KKLSSMAVMYLENNQLRGPIPSL--------VGSLEFFSAYEANISG----TIPDFIG 163 (631)
Q Consensus 97 ~~l~~l~l~~n~l~g~ip~~~-~~l~~L~~L~L~~N~l~g~lP~~--------~~~L~~L~l~~n~l~g----~ip~~~~ 163 (631)
.+++.|+|++|.++..-...+ ..+.+|+.|+|++|.|+..-... ..+|+.|+|++|+++. .++..+.
T Consensus 101 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~ 180 (372)
T 3un9_A 101 HALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLLHDQCQITTLRLSNNPLTAAGVAVLMEGLA 180 (372)
T ss_dssp SCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHHSTTCCCCEEECCSSCCHHHHHHHHHHHHH
T ss_pred CCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHHhcCCccceeeCCCCCCChHHHHHHHHHHh
Confidence 479999999999975433333 35678999999999997432222 2379999999999864 2333344
Q ss_pred cCCCCCCcEEEccCCcccccCCCCCCCCccCcCCCCCCCEEEeecCcCccc----CChhhccCCCCCCEEEccCCCCccc
Q 042825 164 TDTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGI----FPVSSFNNHPKLTTLNLTNNLLQGP 239 (631)
Q Consensus 164 ~~~l~~L~~L~Ls~N~l~g~iP~~~~~~~~~~~~l~~L~~L~L~~N~l~g~----iP~~~~~~l~~L~~L~ls~N~l~g~ 239 (631)
.+++|++|||++|.|+..-...+. ..+..+++|++|+|++|+++.. ++.. +...++|++|+|++|.|+..
T Consensus 181 --~~~~L~~L~Ls~N~l~~~g~~~L~---~~L~~~~~L~~L~Ls~N~i~~~g~~~l~~~-L~~~~~L~~L~Ls~N~i~~~ 254 (372)
T 3un9_A 181 --GNTSVTHLSLLHTGLGDEGLELLA---AQLDRNRQLQELNVAYNGAGDTAALALARA-AREHPSLELLHLYFNELSSE 254 (372)
T ss_dssp --TCSSCCEEECTTSSCHHHHHHHHH---HHGGGCSCCCEEECCSSCCCHHHHHHHHHH-HHHCSSCCEEECTTSSCCHH
T ss_pred --cCCCcCEEeCCCCCCCcHHHHHHH---HHHhcCCCcCeEECCCCCCCHHHHHHHHHH-HHhCCCCCEEeccCCCCCHH
Confidence 578999999999999842110000 1134678999999999999852 3322 45678999999999998754
|
| >3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A | Back alignment and structure |
|---|
Probab=98.69 E-value=3.9e-10 Score=112.21 Aligned_cols=144 Identities=18% Similarity=0.168 Sum_probs=85.3
Q ss_pred CCCCccceeeCCCC-CeEEEEeCC---CCCcccCcc-hhcCCccCceeecccCcccCCCCcC-cc---cccc--cccccc
Q 042825 84 DPCQWSHVICSDDG-QVTNIELQD---QNRKGTVPP-ILKKLSSMAVMYLENNQLRGPIPSL-VG---SLEF--FSAYEA 152 (631)
Q Consensus 84 ~~C~w~gv~C~~~~-~l~~l~l~~---n~l~g~ip~-~~~~l~~L~~L~L~~N~l~g~lP~~-~~---~L~~--L~l~~n 152 (631)
..|.|.|+.|+..+ +|..+...+ ..+.|.+++ .+..|.. .|...+|..++.++-. +. .|.. ++++.|
T Consensus 76 ~l~~~~g~i~~~~~~ki~~~v~~~~~~~~~~~~l~~~~~~~Lk~--~l~~ryn~~~~~LdLs~l~~dp~L~~~~l~l~~N 153 (267)
T 3rw6_A 76 ALKAVNYKILDRENRRISIIINSSAPPHTILNELKPEQVEQLKL--IMSKRYDGSQQALDLKGLRSDPDLVAQNIDVVLN 153 (267)
T ss_dssp HHHHTTSSCBCTTSCBCCCEEEECCCCHHHHTSCCHHHHHHHHH--HHHHTEETTTTEEECTTGGGCHHHHHTTCCCCTT
T ss_pred HHHhcCcEEECCCCCEEEEEEecCCCcccccccCCHHHHHHHHH--HHHhccchhccccCHHHcCCCcchhhcCccccCC
Confidence 45889999997543 565555444 233445543 3333332 3344445444443321 22 3333 556666
Q ss_pred cc---eecCCCCCCcCCCCCCcEEEccCCcccc--cCCCCCCCCccCcCCCCCCCEEEeecCcCcccCChhhccCCC--C
Q 042825 153 NI---SGTIPDFIGTDTFPQLSYLDLGNNNLQG--TIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHP--K 225 (631)
Q Consensus 153 ~l---~g~ip~~~~~~~l~~L~~L~Ls~N~l~g--~iP~~~~~~~~~~~~l~~L~~L~L~~N~l~g~iP~~~~~~l~--~ 225 (631)
+. .+.++.... ++++|+.|+|++|+|++ .+|.. +..+++|+.|+|++|+|++. . . +..+. +
T Consensus 154 ~~~~~~~~l~i~~~--~l~~L~~L~Ls~N~l~~l~~l~~~-------~~~l~~L~~L~Ls~N~i~~~-~-~-l~~l~~l~ 221 (267)
T 3rw6_A 154 RRSCMAATLRIIEE--NIPELLSLNLSNNRLYRLDDMSSI-------VQKAPNLKILNLSGNELKSE-R-E-LDKIKGLK 221 (267)
T ss_dssp SHHHHHHHHHHHHH--HCTTCCEEECTTSCCCCCGGGTTH-------HHHSTTCCEEECTTSCCCSG-G-G-GGGGTTSC
T ss_pred HHHHHHHHHHHHHh--hCCCCCEEECCCCCCCCCccchhH-------HhhCCCCCEEECCCCccCCc-h-h-hhhcccCC
Confidence 32 222221112 57889999999999986 44433 34788899999999998854 2 1 34444 8
Q ss_pred CCEEEccCCCCcccCC
Q 042825 226 LTTLNLTNNLLQGPTP 241 (631)
Q Consensus 226 L~~L~ls~N~l~g~~p 241 (631)
|+.|+|++|.+++.+|
T Consensus 222 L~~L~L~~Npl~~~~~ 237 (267)
T 3rw6_A 222 LEELWLDGNSLCDTFR 237 (267)
T ss_dssp CSEEECTTSTTGGGCS
T ss_pred cceEEccCCcCccccC
Confidence 8888888888887766
|
| >3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B* | Back alignment and structure |
|---|
Probab=98.62 E-value=1.8e-09 Score=120.61 Aligned_cols=135 Identities=12% Similarity=0.117 Sum_probs=76.2
Q ss_pred CCeEEEEeCCCCCcccCcchhcC-CccCceeecc----cCcccCC-----CCc---Ccccccccccccc--cceecCCCC
Q 042825 97 GQVTNIELQDQNRKGTVPPILKK-LSSMAVMYLE----NNQLRGP-----IPS---LVGSLEFFSAYEA--NISGTIPDF 161 (631)
Q Consensus 97 ~~l~~l~l~~n~l~g~ip~~~~~-l~~L~~L~L~----~N~l~g~-----lP~---~~~~L~~L~l~~n--~l~g~ip~~ 161 (631)
.+++.|+++.|.+++..+..++. +++|+.|+|+ .|++++. ++. .+.+|+.|++++| .+++..+..
T Consensus 378 ~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~~ 457 (592)
T 3ogk_B 378 QELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSY 457 (592)
T ss_dssp TTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCCCHHHHHHHHHHCTTCCEEEEECCGGGCCHHHHHH
T ss_pred ccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCchHHHHHHHHHHhCCCCCEEEEecCCCCccHHHHHH
Confidence 35666666666666655555554 6666666664 5556542 111 1236666666532 244444433
Q ss_pred CCcCCCCCCcEEEccCCcccc-cCCCCCCCCccCcCCCCCCCEEEeecCcCcccCChhhccCCCCCCEEEccCCCCccc
Q 042825 162 IGTDTFPQLSYLDLGNNNLQG-TIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNNLLQGP 239 (631)
Q Consensus 162 ~~~~~l~~L~~L~Ls~N~l~g-~iP~~~~~~~~~~~~l~~L~~L~L~~N~l~g~iP~~~~~~l~~L~~L~ls~N~l~g~ 239 (631)
++. .+++|++|+|++|++++ .++.. +.++++|++|+|++|.+++......+..+++|++|+|++|++++.
T Consensus 458 ~~~-~~~~L~~L~L~~n~l~~~~~~~~-------~~~~~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ls~n~it~~ 528 (592)
T 3ogk_B 458 IGQ-YSPNVRWMLLGYVGESDEGLMEF-------SRGCPNLQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYRASMT 528 (592)
T ss_dssp HHH-SCTTCCEEEECSCCSSHHHHHHH-------HTCCTTCCEEEEESCCCBHHHHHHHHHHCSSCCEEEEESCBCCTT
T ss_pred HHH-hCccceEeeccCCCCCHHHHHHH-------HhcCcccCeeeccCCCCcHHHHHHHHHhcCccCeeECcCCcCCHH
Confidence 331 35667777777777664 22221 235677777777777766543323345667777777777776654
|
| >1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A* | Back alignment and structure |
|---|
Probab=98.56 E-value=3.3e-08 Score=99.82 Aligned_cols=63 Identities=19% Similarity=0.158 Sum_probs=47.1
Q ss_pred HHHHHhhcCCcccceeecCCCceEEEEEEecCCcEEEEEEEecCCCCH----------------HHHHHHHHHHHHHhc
Q 042825 410 IQVLRNATNNFSEENRLGRGGVGTVYKGELKDGTEVGVKRMELGSVTE----------------QGIAQFESEITVLTK 472 (631)
Q Consensus 410 ~~~l~~~t~~f~~~~~iG~G~fg~Vyk~~~~~g~~vAvK~l~~~~~~~----------------~~~~~~~~Ei~~l~~ 472 (631)
+..+......|...+.||+|+||.||+|+..+|+.||||.++...... ....++.+|++++.+
T Consensus 82 l~~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~ 160 (282)
T 1zar_A 82 LHRLVRSGKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQK 160 (282)
T ss_dssp HHHHHHTTSCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhCCeEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHh
Confidence 344455566777889999999999999999779999999996432111 135678999999876
|
| >3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=98.55 E-value=1.6e-07 Score=96.95 Aligned_cols=153 Identities=17% Similarity=0.210 Sum_probs=102.0
Q ss_pred CCeEEEEeCCCCCcccCcchhcCCccCceeecccCcccCCCCc-Ccc---ccccccccccc------------cee----
Q 042825 97 GQVTNIELQDQNRKGTVPPILKKLSSMAVMYLENNQLRGPIPS-LVG---SLEFFSAYEAN------------ISG---- 156 (631)
Q Consensus 97 ~~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~L~~N~l~g~lP~-~~~---~L~~L~l~~n~------------l~g---- 156 (631)
.+++.|+|++ +++..-+..|.++++|+.|+|++|.++ .|+. .|. ++..+.+..+. |.+
T Consensus 101 ~~L~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~-~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~~~L 178 (329)
T 3sb4_A 101 QTLEKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAP-NLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEGEPL 178 (329)
T ss_dssp TTCCC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCC-EECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEESCCC
T ss_pred CCCcEEECCc-cccchhHHHhhcCcccceEEcCCCCcc-ccchhhhcCCCceEEecCcchhhhhcccccccccccccccc
Confidence 4788999998 787444457889999999999999886 3433 232 23333322211 100
Q ss_pred ----------cCCC----------C---------CC-------cCCCCCCcEEEccCCcccccCCCCCCCCccCcCCCCC
Q 042825 157 ----------TIPD----------F---------IG-------TDTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLST 200 (631)
Q Consensus 157 ----------~ip~----------~---------~~-------~~~l~~L~~L~Ls~N~l~g~iP~~~~~~~~~~~~l~~ 200 (631)
.+|. . +. ...+++|+.|+|++|+++ .||... |.+|++
T Consensus 179 ~~~i~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~l~~~~~~L~~l~L~~n~i~-~I~~~a------F~~~~~ 251 (329)
T 3sb4_A 179 ETTIQVGAMGKLEDEIMKAGLQPRDINFLTIEGKLDNADFKLIRDYMPNLVSLDISKTNAT-TIPDFT------FAQKKY 251 (329)
T ss_dssp EEEEEECTTCCHHHHHHHTTCCGGGCSEEEEEECCCHHHHHHHHHHCTTCCEEECTTBCCC-EECTTT------TTTCTT
T ss_pred ceeEEecCCCcHHHHHhhcccCccccceEEEeeeecHHHHHHHHHhcCCCeEEECCCCCcc-eecHhh------hhCCCC
Confidence 0000 0 00 002678999999999998 888653 678999
Q ss_pred CCEEEeecCcCcccCChhhccCCCCCC-EEEccCCCCcccCCC-CCCCCceEEeecCCCcccC
Q 042825 201 LEDLSLGHNKLTGIFPVSSFNNHPKLT-TLNLTNNLLQGPTPR-FNNSKLTVDMRTGSNCFCL 261 (631)
Q Consensus 201 L~~L~L~~N~l~g~iP~~~~~~l~~L~-~L~ls~N~l~g~~p~-~~~~~~~~~l~~~~n~~~~ 261 (631)
|+.|+|++| ++ .|+...|.++.+|+ .+++.+ .++..-+. +..+..+..+++.+|.+..
T Consensus 252 L~~l~l~~n-i~-~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~ 311 (329)
T 3sb4_A 252 LLKIKLPHN-LK-TIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVLATGDKITT 311 (329)
T ss_dssp CCEEECCTT-CC-EECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEEECSSCCCE
T ss_pred CCEEECCcc-cc-eehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEEeCCCccCc
Confidence 999999998 76 78888899999999 999988 66655444 4444555666677777654
|
| >3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=98.54 E-value=2.2e-07 Score=95.86 Aligned_cols=57 Identities=21% Similarity=0.327 Sum_probs=43.5
Q ss_pred CCCCCEEEeecCcCcccCChhhccCCCCCCEEEccCCCCcccCCC-CCCCCceE-EeecCC
Q 042825 198 LSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNNLLQGPTPR-FNNSKLTV-DMRTGS 256 (631)
Q Consensus 198 l~~L~~L~L~~N~l~g~iP~~~~~~l~~L~~L~ls~N~l~g~~p~-~~~~~~~~-~l~~~~ 256 (631)
+++|+.|+|++|+++ .||...|..+.+|+.|+|++| ++...+. +..+.... .+.+.+
T Consensus 225 ~~~L~~l~L~~n~i~-~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~ 283 (329)
T 3sb4_A 225 MPNLVSLDISKTNAT-TIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA 283 (329)
T ss_dssp CTTCCEEECTTBCCC-EECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT
T ss_pred cCCCeEEECCCCCcc-eecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc
Confidence 789999999999999 899888999999999999998 6654444 33333333 444454
|
| >3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A | Back alignment and structure |
|---|
Probab=98.30 E-value=5e-08 Score=96.93 Aligned_cols=79 Identities=25% Similarity=0.371 Sum_probs=55.3
Q ss_pred ccccccccccccee--cCCCCCCcCCCCCCcEEEccCCcccccCCCCCCCCccCcCCCCCCCEEEeecCcCcccCCh---
Q 042825 143 SLEFFSAYEANISG--TIPDFIGTDTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPV--- 217 (631)
Q Consensus 143 ~L~~L~l~~n~l~g--~ip~~~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~~~~~~~~l~~L~~L~L~~N~l~g~iP~--- 217 (631)
+|+.|+|++|++++ .+|..+. .+++|+.|+|++|+|++. . .+. .+..+ +|++|+|++|.+++.+|.
T Consensus 171 ~L~~L~Ls~N~l~~l~~l~~~~~--~l~~L~~L~Ls~N~i~~~-~-~l~----~l~~l-~L~~L~L~~Npl~~~~~~~~~ 241 (267)
T 3rw6_A 171 ELLSLNLSNNRLYRLDDMSSIVQ--KAPNLKILNLSGNELKSE-R-ELD----KIKGL-KLEELWLDGNSLCDTFRDQST 241 (267)
T ss_dssp TCCEEECTTSCCCCCGGGTTHHH--HSTTCCEEECTTSCCCSG-G-GGG----GGTTS-CCSEEECTTSTTGGGCSSHHH
T ss_pred CCCEEECCCCCCCCCccchhHHh--hCCCCCEEECCCCccCCc-h-hhh----hcccC-CcceEEccCCcCccccCcchh
Confidence 45555555555554 4555555 789999999999999943 2 221 13334 899999999999988873
Q ss_pred ---hhccCCCCCCEEE
Q 042825 218 ---SSFNNHPKLTTLN 230 (631)
Q Consensus 218 ---~~~~~l~~L~~L~ 230 (631)
..+..+++|+.||
T Consensus 242 y~~~il~~~P~L~~LD 257 (267)
T 3rw6_A 242 YISAIRERFPKLLRLD 257 (267)
T ss_dssp HHHHHHHHCTTCCEES
T ss_pred HHHHHHHHCcccCeEC
Confidence 2367889998886
|
| >2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B* | Back alignment and structure |
|---|
Probab=98.30 E-value=2.2e-08 Score=111.84 Aligned_cols=130 Identities=11% Similarity=0.089 Sum_probs=62.2
Q ss_pred CeEEEEeCCCCCcccCcchhc-CCccCceeecc--c----CcccCCCCc---------CcccccccccccccceecCCCC
Q 042825 98 QVTNIELQDQNRKGTVPPILK-KLSSMAVMYLE--N----NQLRGPIPS---------LVGSLEFFSAYEANISGTIPDF 161 (631)
Q Consensus 98 ~l~~l~l~~n~l~g~ip~~~~-~l~~L~~L~L~--~----N~l~g~lP~---------~~~~L~~L~l~~n~l~g~ip~~ 161 (631)
+++.|.+..|++++.....+. ++++|+.|+|+ + |+++. .|. .+.+|+.|++++ ++++..+..
T Consensus 373 ~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~-~~~~~~~~~l~~~~~~L~~L~L~~-~l~~~~~~~ 450 (594)
T 2p1m_B 373 KLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTL-EPLDIGFGAIVEHCKDLRRLSLSG-LLTDKVFEY 450 (594)
T ss_dssp TCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTC-CCTHHHHHHHHHHCTTCCEEECCS-SCCHHHHHH
T ss_pred hHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccC-CchhhHHHHHHhhCCCccEEeecC-cccHHHHHH
Confidence 556666666666655444444 46666666666 2 34431 111 112455555544 443333333
Q ss_pred CCcCCCCCCcEEEccCCcccccCCCCCCCCccCcCCCCCCCEEEeecCcCcccCChhhccCCCCCCEEEccCCCC
Q 042825 162 IGTDTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNNLL 236 (631)
Q Consensus 162 ~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~~~~~~~~l~~L~~L~L~~N~l~g~iP~~~~~~l~~L~~L~ls~N~l 236 (631)
++. .+++|+.|+|++|.+++..+..+ ..++++|++|+|++|.+++..+......+++|+.|++++|.+
T Consensus 451 l~~-~~~~L~~L~L~~~~i~~~~~~~l------~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~l~~~~~ 518 (594)
T 2p1m_B 451 IGT-YAKKMEMLSVAFAGDSDLGMHHV------LSGCDSLRKLEIRDCPFGDKALLANASKLETMRSLWMSSCSV 518 (594)
T ss_dssp HHH-HCTTCCEEEEESCCSSHHHHHHH------HHHCTTCCEEEEESCSCCHHHHHHTGGGGGGSSEEEEESSCC
T ss_pred HHH-hchhccEeeccCCCCcHHHHHHH------HhcCCCcCEEECcCCCCcHHHHHHHHHhCCCCCEEeeeCCCC
Confidence 321 24556666666665543322111 124555666666666654333222233455566666666555
|
| >3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B* | Back alignment and structure |
|---|
Probab=98.29 E-value=1.2e-07 Score=105.73 Aligned_cols=132 Identities=14% Similarity=0.177 Sum_probs=56.1
Q ss_pred CeEEEEeCCCCCccc----CcchhcCCccCceeecccCcccC----CCCcC---cccccccccccccceecCCCCCCcCC
Q 042825 98 QVTNIELQDQNRKGT----VPPILKKLSSMAVMYLENNQLRG----PIPSL---VGSLEFFSAYEANISGTIPDFIGTDT 166 (631)
Q Consensus 98 ~l~~l~l~~n~l~g~----ip~~~~~l~~L~~L~L~~N~l~g----~lP~~---~~~L~~L~l~~n~l~g~ip~~~~~~~ 166 (631)
+++.|+|++|.+++. ++..+.++++|++|+|++|.+++ .++.. ..+|+.|++++|.+.+ +|..+. .
T Consensus 165 ~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~-l~~~~~--~ 241 (592)
T 3ogk_B 165 KIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILE-LVGFFK--A 241 (592)
T ss_dssp TCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGGG-GHHHHH--H
T ss_pred CCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHHH-HHHHHh--h
Confidence 445555555544433 33333444555555555555541 11111 1245555555555443 333333 3
Q ss_pred CCCCcEEEccCCcccccCCCCCCCCccCcCCCCCCCEEEeecCcCcccCChhhccCCCCCCEEEccCCCCcc
Q 042825 167 FPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNNLLQG 238 (631)
Q Consensus 167 l~~L~~L~Ls~N~l~g~iP~~~~~~~~~~~~l~~L~~L~L~~N~l~g~iP~~~~~~l~~L~~L~ls~N~l~g 238 (631)
+++|+.|+++.+.. .++.. .....+..+++|+.|+++++... .+|.. +..+++|++|+|++|.+++
T Consensus 242 ~~~L~~L~l~~~~~--~~~~~--~~~~~l~~~~~L~~L~l~~~~~~-~l~~~-~~~~~~L~~L~Ls~~~l~~ 307 (592)
T 3ogk_B 242 AANLEEFCGGSLNE--DIGMP--EKYMNLVFPRKLCRLGLSYMGPN-EMPIL-FPFAAQIRKLDLLYALLET 307 (592)
T ss_dssp CTTCCEEEECBCCC--CTTCT--TSSSCCCCCTTCCEEEETTCCTT-TGGGG-GGGGGGCCEEEETTCCCCH
T ss_pred hhHHHhhccccccc--ccchH--HHHHHhhccccccccCccccchh-HHHHH-HhhcCCCcEEecCCCcCCH
Confidence 44455554443111 11100 00012334555555555554322 34432 4455555555555555443
|
| >2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=98.07 E-value=9.2e-07 Score=92.24 Aligned_cols=139 Identities=13% Similarity=0.170 Sum_probs=78.4
Q ss_pred CCeEEEEeCCCCC---------cccCcchhcCCccCceeecccCc-ccCCCCc-CcccccccccccccceecCCCCCCcC
Q 042825 97 GQVTNIELQDQNR---------KGTVPPILKKLSSMAVMYLENNQ-LRGPIPS-LVGSLEFFSAYEANISGTIPDFIGTD 165 (631)
Q Consensus 97 ~~l~~l~l~~n~l---------~g~ip~~~~~l~~L~~L~L~~N~-l~g~lP~-~~~~L~~L~l~~n~l~g~ip~~~~~~ 165 (631)
.+|+.|.+.++.. .+.++..+..+++|+.|+|++|. + .+|. ...+|+.|++..+.++...-..+...
T Consensus 139 ~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~l--~l~~~~~~~L~~L~L~~~~l~~~~l~~l~~~ 216 (362)
T 2ra8_A 139 AHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNNL--SIGKKPRPNLKSLEIISGGLPDSVVEDILGS 216 (362)
T ss_dssp TTCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBTC--BCCSCBCTTCSEEEEECSBCCHHHHHHHHHS
T ss_pred chhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCCc--eeccccCCCCcEEEEecCCCChHHHHHHHHc
Confidence 4677777765432 12455666777888888887763 2 2332 23478888887776653322222222
Q ss_pred CCCCCcEEEccC--CcccccCC-CCCCCCccCcCCCCCCCEEEeecCcCcccCChhhc--cCCCCCCEEEccCCCCcc
Q 042825 166 TFPQLSYLDLGN--NNLQGTIP-SSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSF--NNHPKLTTLNLTNNLLQG 238 (631)
Q Consensus 166 ~l~~L~~L~Ls~--N~l~g~iP-~~~~~~~~~~~~l~~L~~L~L~~N~l~g~iP~~~~--~~l~~L~~L~ls~N~l~g 238 (631)
.+++|+.|+|+. |...|... ..+.. .-....+++|++|+|++|.+++..+..++ ..+++|+.|+|+.|.|++
T Consensus 217 ~lp~L~~L~L~~~~~~~~~~~~~~~l~~-~l~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d 293 (362)
T 2ra8_A 217 DLPNLEKLVLYVGVEDYGFDGDMNVFRP-LFSKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTD 293 (362)
T ss_dssp BCTTCCEEEEECBCGGGTCCSCGGGTGG-GSCTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBH
T ss_pred cCCCCcEEEEeccccccccchhHHHHHH-HHhcCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCCh
Confidence 577888888753 23222110 00000 00012467888888888887754433222 246778888888888766
|
| >1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1 | Back alignment and structure |
|---|
Probab=97.90 E-value=3.4e-07 Score=86.17 Aligned_cols=67 Identities=12% Similarity=0.118 Sum_probs=41.2
Q ss_pred CCCCcEEEccCCcccccCCCCCCCCccCcCCCCCCCEEEe--ecCcCccc----CChhhccCCCCCCEEEccCCCCc
Q 042825 167 FPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSL--GHNKLTGI----FPVSSFNNHPKLTTLNLTNNLLQ 237 (631)
Q Consensus 167 l~~L~~L~Ls~N~l~g~iP~~~~~~~~~~~~l~~L~~L~L--~~N~l~g~----iP~~~~~~l~~L~~L~ls~N~l~ 237 (631)
.++|++|+|++|.++..--..+. ..+...++|++|+| ++|.++.. +-. .+...++|+.|+|++|.+.
T Consensus 92 n~~L~~L~L~~N~i~~~g~~~l~---~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~-~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 92 NNTLKSLNVESNFISGSGILALV---EALQSNTSLIELRIDNQSQPLGNNVEMEIAN-MLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp CSSCCEEECCSSCCCHHHHHHHH---HGGGGCSSCCEEECCCCSSCCCHHHHHHHHH-HHHHCSSCCEEECCCSSHH
T ss_pred CCCcCEEECcCCcCCHHHHHHHH---HHHHhCCCceEEEecCCCCCCCHHHHHHHHH-HHHhCCCcCEEeccCCCCC
Confidence 35788888888887632100000 11346677888888 77888643 222 2445577888888888764
|
| >2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B* | Back alignment and structure |
|---|
Probab=97.83 E-value=1.1e-06 Score=97.95 Aligned_cols=131 Identities=14% Similarity=0.236 Sum_probs=87.2
Q ss_pred CCeEEEEeCCCCCcccCcchhc-CCccCceeecccC-cccCC-CCc---CcccccccccccccceecCCCCCCc--CCCC
Q 042825 97 GQVTNIELQDQNRKGTVPPILK-KLSSMAVMYLENN-QLRGP-IPS---LVGSLEFFSAYEANISGTIPDFIGT--DTFP 168 (631)
Q Consensus 97 ~~l~~l~l~~n~l~g~ip~~~~-~l~~L~~L~L~~N-~l~g~-lP~---~~~~L~~L~l~~n~l~g~ip~~~~~--~~l~ 168 (631)
.+++.|+|+++.+++..+..+. .+++|++|+|++| .++.. ++. ...+|+.|++++|.+++..+..+.. ..++
T Consensus 105 ~~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~ 184 (594)
T 2p1m_B 105 TWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYT 184 (594)
T ss_dssp TTCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCC
T ss_pred CCCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCC
Confidence 4788899999888877777775 6889999999888 55431 333 2348888999988877644333320 1567
Q ss_pred CCcEEEccCCcccccCCCCCCCCccC-cCCCCCCCEEEeecC-cCcccCChhhccCCCCCCEEEccCC
Q 042825 169 QLSYLDLGNNNLQGTIPSSFGMPFAD-ISNLSTLEDLSLGHN-KLTGIFPVSSFNNHPKLTTLNLTNN 234 (631)
Q Consensus 169 ~L~~L~Ls~N~l~g~iP~~~~~~~~~-~~~l~~L~~L~L~~N-~l~g~iP~~~~~~l~~L~~L~ls~N 234 (631)
+|+.|+|++|. +.++... +.. +.++++|++|+|++| .++ .+|.. +..+++|+.|+++.+
T Consensus 185 ~L~~L~l~~~~--~~~~~~~---l~~l~~~~~~L~~L~L~~~~~~~-~l~~~-~~~~~~L~~L~l~~~ 245 (594)
T 2p1m_B 185 SLVSLNISCLA--SEVSFSA---LERLVTRCPNLKSLKLNRAVPLE-KLATL-LQRAPQLEELGTGGY 245 (594)
T ss_dssp CCCEEECTTCC--SCCCHHH---HHHHHHHCTTCCEEECCTTSCHH-HHHHH-HHHCTTCSEEECSBC
T ss_pred cCcEEEecccC--CcCCHHH---HHHHHHhCCCCcEEecCCCCcHH-HHHHH-HhcCCcceEcccccc
Confidence 89999998886 2232110 001 235688888888888 444 36643 777888888886554
|
| >4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A | Back alignment and structure |
|---|
Probab=97.80 E-value=0.00013 Score=77.16 Aligned_cols=123 Identities=12% Similarity=0.157 Sum_probs=74.0
Q ss_pred CeEEEEeCCCCCcccCcchhcCCccCceeecccCcccCCCCc-Ccc--cccccccccccceecCCCCCCcCCCCCCcEEE
Q 042825 98 QVTNIELQDQNRKGTVPPILKKLSSMAVMYLENNQLRGPIPS-LVG--SLEFFSAYEANISGTIPDFIGTDTFPQLSYLD 174 (631)
Q Consensus 98 ~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~L~~N~l~g~lP~-~~~--~L~~L~l~~n~l~g~ip~~~~~~~l~~L~~L~ 174 (631)
.++.+.|.+ +++..-...|.++.+|+.++|.+| ++ .|+. .|. +|+.+.+ .++++..-+..|. .+++|+.++
T Consensus 204 ~L~~l~lp~-~l~~I~~~aF~~~~~L~~l~l~~~-l~-~I~~~aF~~~~L~~i~l-p~~i~~I~~~aF~--~c~~L~~l~ 277 (401)
T 4fdw_A 204 GIEEVLLPV-TLKEIGSQAFLKTSQLKTIEIPEN-VS-TIGQEAFRESGITTVKL-PNGVTNIASRAFY--YCPELAEVT 277 (401)
T ss_dssp CCSEEECCT-TCCEECTTTTTTCTTCCCEECCTT-CC-EECTTTTTTCCCSEEEE-ETTCCEECTTTTT--TCTTCCEEE
T ss_pred ccCEEEeCC-chheehhhHhhCCCCCCEEecCCC-cc-CccccccccCCccEEEe-CCCccEEChhHhh--CCCCCCEEE
Confidence 566677763 355333345677777777777664 33 2332 222 5666666 3445432234444 677888888
Q ss_pred ccCCcccc----cCCCCCCCCccCcCCCCCCCEEEeecCcCcccCChhhccCCCCCCEEEccCC
Q 042825 175 LGNNNLQG----TIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNN 234 (631)
Q Consensus 175 Ls~N~l~g----~iP~~~~~~~~~~~~l~~L~~L~L~~N~l~g~iP~~~~~~l~~L~~L~ls~N 234 (631)
|.+|.+.. .|+.. .|.+|++|+.++|. |.++ .|+...|.++.+|+.++|.+|
T Consensus 278 l~~~~~~~~~~~~I~~~------aF~~c~~L~~l~l~-~~i~-~I~~~aF~~c~~L~~l~lp~~ 333 (401)
T 4fdw_A 278 TYGSTFNDDPEAMIHPY------CLEGCPKLARFEIP-ESIR-ILGQGLLGGNRKVTQLTIPAN 333 (401)
T ss_dssp EESSCCCCCTTCEECTT------TTTTCTTCCEECCC-TTCC-EECTTTTTTCCSCCEEEECTT
T ss_pred eCCccccCCcccEECHH------HhhCCccCCeEEeC-CceE-EEhhhhhcCCCCccEEEECcc
Confidence 87776641 23322 25677788888887 4466 677666777788888887555
|
| >2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=97.80 E-value=2.3e-06 Score=89.22 Aligned_cols=135 Identities=17% Similarity=0.240 Sum_probs=89.9
Q ss_pred CCCeEEEEeCCCCCcccCcchhcCCccCceeecccCcccCCCC-----cCccccccccccc--ccceec-----CCCCCC
Q 042825 96 DGQVTNIELQDQNRKGTVPPILKKLSSMAVMYLENNQLRGPIP-----SLVGSLEFFSAYE--ANISGT-----IPDFIG 163 (631)
Q Consensus 96 ~~~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~L~~N~l~g~lP-----~~~~~L~~L~l~~--n~l~g~-----ip~~~~ 163 (631)
..+++.|+|+++.-. .+++ + .+++|+.|+|..+.++...- ..+.+|+.|+|+. |+..|. +...+.
T Consensus 171 ~P~L~~L~L~g~~~l-~l~~-~-~~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~ 247 (362)
T 2ra8_A 171 MPLLNNLKIKGTNNL-SIGK-K-PRPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFS 247 (362)
T ss_dssp CTTCCEEEEECCBTC-BCCS-C-BCTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGGGSC
T ss_pred CCCCcEEEEeCCCCc-eecc-c-cCCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHHHHHHHHh
Confidence 358999999887311 3444 4 38899999999888764211 1245899998863 332221 111121
Q ss_pred cCCCCCCcEEEccCCcccccCCCCCCCCccCcCCCCCCCEEEeecCcCccc----CChhhccCCCCCCEEEccCCCCcc
Q 042825 164 TDTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGI----FPVSSFNNHPKLTTLNLTNNLLQG 238 (631)
Q Consensus 164 ~~~l~~L~~L~Ls~N~l~g~iP~~~~~~~~~~~~l~~L~~L~L~~N~l~g~----iP~~~~~~l~~L~~L~ls~N~l~g 238 (631)
...+++|+.|+|++|.+++..+..+. +...+++|++|+|+.|.+++. ++.. +..+++|+.|+|++|.++.
T Consensus 248 ~~~~p~Lr~L~L~~~~i~~~~~~~la----~a~~~~~L~~LdLs~n~L~d~G~~~L~~~-L~~l~~L~~L~L~~n~i~d 321 (362)
T 2ra8_A 248 KDRFPNLKWLGIVDAEEQNVVVEMFL----ESDILPQLETMDISAGVLTDEGARLLLDH-VDKIKHLKFINMKYNYLSD 321 (362)
T ss_dssp TTTCTTCCEEEEESCTTHHHHHHHHH----HCSSGGGCSEEECCSSCCBHHHHHHHHTT-HHHHTTCSEEECCSBBCCH
T ss_pred cCCCCCcCEEeCCCCCCchHHHHHHH----hCccCCCCCEEECCCCCCChHHHHHHHhh-cccCCcceEEECCCCcCCH
Confidence 12579999999999999854432221 112578999999999999863 3322 3467899999999998864
|
| >1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1 | Back alignment and structure |
|---|
Probab=97.75 E-value=9.6e-07 Score=83.01 Aligned_cols=111 Identities=13% Similarity=0.187 Sum_probs=80.6
Q ss_pred CCeEEEEeCCC-CCcc----cCcchhcCCccCceeecccCcccCC----CCcCc---ccccccccccccceec----CCC
Q 042825 97 GQVTNIELQDQ-NRKG----TVPPILKKLSSMAVMYLENNQLRGP----IPSLV---GSLEFFSAYEANISGT----IPD 160 (631)
Q Consensus 97 ~~l~~l~l~~n-~l~g----~ip~~~~~l~~L~~L~L~~N~l~g~----lP~~~---~~L~~L~l~~n~l~g~----ip~ 160 (631)
..++.|+|++| .+.. .+...+...++|++|+|++|.|... +...+ .+|+.|+|++|+++.. +..
T Consensus 36 ~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~~~l~~ 115 (185)
T 1io0_A 36 PDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILALVE 115 (185)
T ss_dssp TTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHHHH
T ss_pred CCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHHHHHHH
Confidence 47899999999 8863 3556677889999999999999642 22222 2799999999998743 344
Q ss_pred CCCcCCCCCCcEEEc--cCCcccccCCCCCCCCccCcCCCCCCCEEEeecCcCc
Q 042825 161 FIGTDTFPQLSYLDL--GNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLT 212 (631)
Q Consensus 161 ~~~~~~l~~L~~L~L--s~N~l~g~iP~~~~~~~~~~~~l~~L~~L~L~~N~l~ 212 (631)
.+. ..+.|++|+| ++|.++..--..+. ..+...++|++|+|++|.+.
T Consensus 116 ~L~--~n~~L~~L~L~~~~N~i~~~g~~~l~---~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 116 ALQ--SNTSLIELRIDNQSQPLGNNVEMEIA---NMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp GGG--GCSSCCEEECCCCSSCCCHHHHHHHH---HHHHHCSSCCEEECCCSSHH
T ss_pred HHH--hCCCceEEEecCCCCCCCHHHHHHHH---HHHHhCCCcCEEeccCCCCC
Confidence 454 5678999999 88999743211110 11345689999999999986
|
| >4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A | Back alignment and structure |
|---|
Probab=97.71 E-value=0.00019 Score=75.88 Aligned_cols=124 Identities=15% Similarity=0.152 Sum_probs=79.2
Q ss_pred CeEEEEeCCCCCcccCcchhcCCccCceeecccCcccCCCCcC-cc--cccccccccccceecCCCCCCcCCCCCCcEEE
Q 042825 98 QVTNIELQDQNRKGTVPPILKKLSSMAVMYLENNQLRGPIPSL-VG--SLEFFSAYEANISGTIPDFIGTDTFPQLSYLD 174 (631)
Q Consensus 98 ~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~L~~N~l~g~lP~~-~~--~L~~L~l~~n~l~g~ip~~~~~~~l~~L~~L~ 174 (631)
+++.+.|.+ ++...-+..|.++.+|+.++|++|+++ .+|.. +. +|+.+.+.++ ++..-...|. .+++|+.++
T Consensus 158 ~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l~~n~l~-~I~~~aF~~~~L~~l~lp~~-l~~I~~~aF~--~~~~L~~l~ 232 (401)
T 4fdw_A 158 TVQEIVFPS-TLEQLKEDIFYYCYNLKKADLSKTKIT-KLPASTFVYAGIEEVLLPVT-LKEIGSQAFL--KTSQLKTIE 232 (401)
T ss_dssp CCCEEECCT-TCCEECSSTTTTCTTCCEEECTTSCCS-EECTTTTTTCCCSEEECCTT-CCEECTTTTT--TCTTCCCEE
T ss_pred CceEEEeCC-CccEehHHHhhCcccCCeeecCCCcce-EechhhEeecccCEEEeCCc-hheehhhHhh--CCCCCCEEe
Confidence 477777775 555333457888888888888888887 45543 22 6777777643 5432233444 677888888
Q ss_pred ccCCcccccCCCCCCCCccCcCCCCCCCEEEeecCcCcccCChhhccCCCCCCEEEccCCCCc
Q 042825 175 LGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNNLLQ 237 (631)
Q Consensus 175 Ls~N~l~g~iP~~~~~~~~~~~~l~~L~~L~L~~N~l~g~iP~~~~~~l~~L~~L~ls~N~l~ 237 (631)
|..| ++ .|+... |.+ .+|+.+.| .|.++ .|+...|..+++|+.+++.+|.+.
T Consensus 233 l~~~-l~-~I~~~a------F~~-~~L~~i~l-p~~i~-~I~~~aF~~c~~L~~l~l~~~~~~ 284 (401)
T 4fdw_A 233 IPEN-VS-TIGQEA------FRE-SGITTVKL-PNGVT-NIASRAFYYCPELAEVTTYGSTFN 284 (401)
T ss_dssp CCTT-CC-EECTTT------TTT-CCCSEEEE-ETTCC-EECTTTTTTCTTCCEEEEESSCCC
T ss_pred cCCC-cc-Cccccc------ccc-CCccEEEe-CCCcc-EEChhHhhCCCCCCEEEeCCcccc
Confidence 8765 44 455432 334 56777777 34455 566566777777777777776654
|
| >3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A* | Back alignment and structure |
|---|
Probab=97.35 E-value=0.00028 Score=61.81 Aligned_cols=57 Identities=28% Similarity=0.469 Sum_probs=43.9
Q ss_pred cEEEccCCccc-ccCCCCCCCCccCcCCCCCCCEEEeecCcCcccCChhhccCCCCCCEEEccCCCCc
Q 042825 171 SYLDLGNNNLQ-GTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNNLLQ 237 (631)
Q Consensus 171 ~~L~Ls~N~l~-g~iP~~~~~~~~~~~~l~~L~~L~L~~N~l~g~iP~~~~~~l~~L~~L~ls~N~l~ 237 (631)
..+|.+++.|+ ..+|..+. .+|++|+|++|+|+ .||...|..+++|+.|+|++|.+.
T Consensus 11 ~~v~Cs~~~L~~~~vP~~lp---------~~l~~L~Ls~N~l~-~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 11 TLVDCGRRGLTWASLPTAFP---------VDTTELVLTGNNLT-ALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp TEEECCSSCCCTTTSCSCCC---------TTCSEEECTTSCCS-SCCTTTGGGCTTCCEEECCSSCCB
T ss_pred CEEEeCCCCCccccCCCCCC---------cCCCEEECCCCcCC-ccChhhhhhccccCEEEecCCCee
Confidence 36788888886 46776543 56888888888888 677777888888888888888654
|
| >3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A* | Back alignment and structure |
|---|
Probab=96.84 E-value=0.0012 Score=57.83 Aligned_cols=38 Identities=29% Similarity=0.435 Sum_probs=30.9
Q ss_pred CCCcEEEccCCcccccCCCCCCCCccCcCCCCCCCEEEeecCcCc
Q 042825 168 PQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLT 212 (631)
Q Consensus 168 ~~L~~L~Ls~N~l~g~iP~~~~~~~~~~~~l~~L~~L~L~~N~l~ 212 (631)
++|+.|||++|+|+ .||... |..+++|+.|+|++|.+.
T Consensus 31 ~~l~~L~Ls~N~l~-~l~~~~------f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 31 VDTTELVLTGNNLT-ALPPGL------LDALPALRTAHLGANPWR 68 (130)
T ss_dssp TTCSEEECTTSCCS-SCCTTT------GGGCTTCCEEECCSSCCB
T ss_pred cCCCEEECCCCcCC-ccChhh------hhhccccCEEEecCCCee
Confidence 46889999999998 787654 567888999999999774
|
| >4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus} | Back alignment and structure |
|---|
Probab=95.88 E-value=0.026 Score=59.07 Aligned_cols=118 Identities=18% Similarity=0.197 Sum_probs=67.3
Q ss_pred CeEEEEeCCCCCcccCcchhcCCccCceeecccCcccCCCCc-Ccc---cccccccccccceecCCC-CCCcCCCCCCcE
Q 042825 98 QVTNIELQDQNRKGTVPPILKKLSSMAVMYLENNQLRGPIPS-LVG---SLEFFSAYEANISGTIPD-FIGTDTFPQLSY 172 (631)
Q Consensus 98 ~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~L~~N~l~g~lP~-~~~---~L~~L~l~~n~l~g~ip~-~~~~~~l~~L~~ 172 (631)
.++.+.+.+. ++-.-...+.++..|+.+.+..|... ++. .+. .++.+....+. ++. .+. .+.+|+.
T Consensus 231 ~l~~i~ip~~-~~~i~~~~f~~~~~l~~~~~~~~~~~--i~~~~F~~~~~l~~~~~~~~~----i~~~~F~--~~~~L~~ 301 (394)
T 4fs7_A 231 GVKNIIIPDS-FTELGKSVFYGCTDLESISIQNNKLR--IGGSLFYNCSGLKKVIYGSVI----VPEKTFY--GCSSLTE 301 (394)
T ss_dssp CCCEEEECTT-CCEECSSTTTTCSSCCEEEECCTTCE--ECSCTTTTCTTCCEEEECSSE----ECTTTTT--TCTTCCE
T ss_pred CCceEEECCC-ceecccccccccccceeEEcCCCcce--eeccccccccccceeccCcee----ecccccc--ccccccc
Confidence 5666766543 23122345677888888888776543 221 121 34444333322 232 222 5677777
Q ss_pred EEccCCcccccCCCCCCCCccCcCCCCCCCEEEeecCcCcccCChhhccCCCCCCEEEccCC
Q 042825 173 LDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNN 234 (631)
Q Consensus 173 L~Ls~N~l~g~iP~~~~~~~~~~~~l~~L~~L~L~~N~l~g~iP~~~~~~l~~L~~L~ls~N 234 (631)
+.+..| ++ .|+... |.++.+|+.++|.++ ++ .|+...|.++.+|+.+++..|
T Consensus 302 i~l~~~-i~-~I~~~a------F~~c~~L~~i~lp~~-v~-~I~~~aF~~c~~L~~i~lp~~ 353 (394)
T 4fs7_A 302 VKLLDS-VK-FIGEEA------FESCTSLVSIDLPYL-VE-EIGKRSFRGCTSLSNINFPLS 353 (394)
T ss_dssp EEECTT-CC-EECTTT------TTTCTTCCEECCCTT-CC-EECTTTTTTCTTCCEECCCTT
T ss_pred cccccc-cc-eechhh------hcCCCCCCEEEeCCc-cc-EEhHHhccCCCCCCEEEECcc
Confidence 777654 44 454332 557777777777644 55 566666777777777777665
|
| >1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A* | Back alignment and structure |
|---|
Probab=95.86 E-value=0.0099 Score=58.40 Aligned_cols=35 Identities=17% Similarity=0.198 Sum_probs=29.9
Q ss_pred CcccceeecCCCceEEEEEEe-cCCcE--EEEEEEecC
Q 042825 419 NFSEENRLGRGGVGTVYKGEL-KDGTE--VGVKRMELG 453 (631)
Q Consensus 419 ~f~~~~~iG~G~fg~Vyk~~~-~~g~~--vAvK~l~~~ 453 (631)
-|+..+.||+|+||.||+|+. .+|+. ||||+++..
T Consensus 48 ~~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~ 85 (258)
T 1zth_A 48 ITAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIE 85 (258)
T ss_dssp EEEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC
T ss_pred chhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECC
Confidence 366788999999999999997 67988 999987543
|
| >4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum} | Back alignment and structure |
|---|
Probab=94.75 E-value=0.073 Score=55.11 Aligned_cols=107 Identities=11% Similarity=0.157 Sum_probs=63.6
Q ss_pred cchhcCCccCceeecccCcccCCCCc-Cc---ccccccccccccceecCCCCCCcCCCCCCcEEEccCCcccccCCCCCC
Q 042825 114 PPILKKLSSMAVMYLENNQLRGPIPS-LV---GSLEFFSAYEANISGTIPDFIGTDTFPQLSYLDLGNNNLQGTIPSSFG 189 (631)
Q Consensus 114 p~~~~~l~~L~~L~L~~N~l~g~lP~-~~---~~L~~L~l~~n~l~g~ip~~~~~~~l~~L~~L~Ls~N~l~g~iP~~~~ 189 (631)
...+....+|+.+.+..+- . .++. .+ .+|+.+.+..+ ++..-...+. .+.+|+.+++..+ +. .++...
T Consensus 210 ~~~f~~~~~l~~i~~~~~~-~-~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~--~~~~l~~i~l~~~-i~-~i~~~a- 281 (379)
T 4h09_A 210 AYGFSYGKNLKKITITSGV-T-TLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQ--NCTALKTLNFYAK-VK-TVPYLL- 281 (379)
T ss_dssp TTTTTTCSSCSEEECCTTC-C-EECTTTTTTCSSCCEEEECTT-CCEECTTTTT--TCTTCCEEEECCC-CS-EECTTT-
T ss_pred ecccccccccceeeeccce-e-EEccccccCCccceEEEcCCC-ccEeCccccc--eeehhcccccccc-ce-eccccc-
Confidence 3455666777777765442 1 1221 11 15665555443 3311122333 5677888877543 44 455432
Q ss_pred CCccCcCCCCCCCEEEeecCcCcccCChhhccCCCCCCEEEccCC
Q 042825 190 MPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNN 234 (631)
Q Consensus 190 ~~~~~~~~l~~L~~L~L~~N~l~g~iP~~~~~~l~~L~~L~ls~N 234 (631)
+.+|++|+.+.+.+|.++ .|+...|.++.+|+.+.|..+
T Consensus 282 -----F~~c~~L~~i~l~~~~i~-~I~~~aF~~c~~L~~i~lp~~ 320 (379)
T 4h09_A 282 -----CSGCSNLTKVVMDNSAIE-TLEPRVFMDCVKLSSVTLPTA 320 (379)
T ss_dssp -----TTTCTTCCEEEECCTTCC-EECTTTTTTCTTCCEEECCTT
T ss_pred -----cccccccccccccccccc-eehhhhhcCCCCCCEEEcCcc
Confidence 567888888888888777 677777888888888888654
|
| >2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=94.70 E-value=0.018 Score=39.26 Aligned_cols=30 Identities=27% Similarity=0.464 Sum_probs=19.1
Q ss_pred EEeehhhhhHHHHHHHHHHhhhhhcccCCC
Q 042825 351 ITLGSVIGDFCGLFVVGLGVFLYIRNKKSS 380 (631)
Q Consensus 351 ~ii~~v~~~~~~~~~~~~~~~~~~~~~~~~ 380 (631)
.|++.|++.+++++++++++++++|||+.+
T Consensus 12 ~IA~gVVgGv~~~~ii~~~~~~~~RRr~~~ 41 (44)
T 2ks1_B 12 SIATGMVGALLLLLVVALGIGLFMRRRHIV 41 (44)
T ss_dssp SSTHHHHHHHHHHHHHHHHHHHHHHTTTCC
T ss_pred eEEeehhHHHHHHHHHHHHHHHHhhhhHhh
Confidence 356667776666666666666666666553
|
| >2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=94.63 E-value=0.016 Score=39.42 Aligned_cols=31 Identities=32% Similarity=0.550 Sum_probs=19.4
Q ss_pred EEeehhhhhHHHHHHHHHHhhhhhcccCCCC
Q 042825 351 ITLGSVIGDFCGLFVVGLGVFLYIRNKKSSE 381 (631)
Q Consensus 351 ~ii~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (631)
.|++.|++.+++++++++.+++|+|||+.++
T Consensus 11 aIA~gVVgGv~~v~ii~~~~~~~~RRRr~~~ 41 (44)
T 2l2t_A 11 LIAAGVIGGLFILVIVGLTFAVYVRRKSIKK 41 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCSSC
T ss_pred eEEEeehHHHHHHHHHHHHHHHHhhhhhhhh
Confidence 3566666666666666666666666665443
|
| >4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A | Back alignment and structure |
|---|
Probab=94.61 E-value=0.035 Score=57.82 Aligned_cols=35 Identities=20% Similarity=0.248 Sum_probs=31.5
Q ss_pred CCcccceeecCCCceEEEEEEecCCcEEEEEEEec
Q 042825 418 NNFSEENRLGRGGVGTVYKGELKDGTEVGVKRMEL 452 (631)
Q Consensus 418 ~~f~~~~~iG~G~fg~Vyk~~~~~g~~vAvK~l~~ 452 (631)
.-|+..+.||+|+||.||+|...+|+.||||+++.
T Consensus 95 ~iY~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~ 129 (397)
T 4gyi_A 95 DVYSVGSRIGVGKESDIMIVADEKGKQKVLKIHRL 129 (397)
T ss_dssp SCSEEEEEEEECSSEEEEEEECTTCCEEEEEEECT
T ss_pred CEEEecCEeeeCCceEEEEEECCCCCEEEEEEEec
Confidence 34889999999999999999998999999998753
|
| >4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165} | Back alignment and structure |
|---|
Probab=94.55 E-value=0.16 Score=52.97 Aligned_cols=104 Identities=15% Similarity=0.289 Sum_probs=51.9
Q ss_pred hhcCCccCceeecccCcccCCCCc-Cc---ccccccccccccceecCCC-CCCcCCCCCCcEEEccCCcccccCCCCCCC
Q 042825 116 ILKKLSSMAVMYLENNQLRGPIPS-LV---GSLEFFSAYEANISGTIPD-FIGTDTFPQLSYLDLGNNNLQGTIPSSFGM 190 (631)
Q Consensus 116 ~~~~l~~L~~L~L~~N~l~g~lP~-~~---~~L~~L~l~~n~l~g~ip~-~~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~ 190 (631)
.|.++..|+.+.+.++..+ +.. .+ .+|+.+.+. ++++ .|++ .|. .+.+|+.++|..| ++ .|...
T Consensus 260 aF~~c~~L~~i~lp~~~~~--I~~~aF~~c~~L~~i~l~-~~i~-~I~~~aF~--~c~~L~~i~lp~~-v~-~I~~~--- 328 (394)
T 4gt6_A 260 AFDSCAYLASVKMPDSVVS--IGTGAFMNCPALQDIEFS-SRIT-ELPESVFA--GCISLKSIDIPEG-IT-QILDD--- 328 (394)
T ss_dssp TTTTCSSCCEEECCTTCCE--ECTTTTTTCTTCCEEECC-TTCC-EECTTTTT--TCTTCCEEECCTT-CC-EECTT---
T ss_pred eeeecccccEEecccccce--ecCcccccccccccccCC-Cccc-ccCceeec--CCCCcCEEEeCCc-cc-EehHh---
Confidence 3555566666666544321 111 11 145555443 2233 2332 222 4566666666543 33 34332
Q ss_pred CccCcCCCCCCCEEEeecCcCcccCChhhccCCCCCCEEEccCCC
Q 042825 191 PFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNNL 235 (631)
Q Consensus 191 ~~~~~~~l~~L~~L~L~~N~l~g~iP~~~~~~l~~L~~L~ls~N~ 235 (631)
.|.+|.+|+.+.|..+ ++ .|....|.++.+|+.+++.+|.
T Consensus 329 ---aF~~C~~L~~i~ip~s-v~-~I~~~aF~~C~~L~~i~~~~~~ 368 (394)
T 4gt6_A 329 ---AFAGCEQLERIAIPSS-VT-KIPESAFSNCTALNNIEYSGSR 368 (394)
T ss_dssp ---TTTTCTTCCEEEECTT-CC-BCCGGGGTTCTTCCEEEESSCH
T ss_pred ---HhhCCCCCCEEEECcc-cC-EEhHhHhhCCCCCCEEEECCce
Confidence 1456666666666543 44 5665556666666666666554
|
| >3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A | Back alignment and structure |
|---|
Probab=94.43 E-value=0.0066 Score=55.80 Aligned_cols=62 Identities=11% Similarity=0.128 Sum_probs=39.6
Q ss_pred CCCCCcEEEccCCc-ccccCCCCCCCCccCcCCC----CCCCEEEeecCc-CcccCChhhccCCCCCCEEEccCCC
Q 042825 166 TFPQLSYLDLGNNN-LQGTIPSSFGMPFADISNL----STLEDLSLGHNK-LTGIFPVSSFNNHPKLTTLNLTNNL 235 (631)
Q Consensus 166 ~l~~L~~L~Ls~N~-l~g~iP~~~~~~~~~~~~l----~~L~~L~L~~N~-l~g~iP~~~~~~l~~L~~L~ls~N~ 235 (631)
.+++|+.|+|+++. ++..- +..++.+ ++|++|+|+++. +|..== ..+..+++|+.|+|++..
T Consensus 83 ~~~~L~~L~L~~C~~ItD~g-------L~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl-~~L~~~~~L~~L~L~~c~ 150 (176)
T 3e4g_A 83 GLQYVEKIRLCKCHYIEDGC-------LERLSQLENLQKSMLEMEIISCGNVTDKGI-IALHHFRNLKYLFLSDLP 150 (176)
T ss_dssp TCSCCCEEEEESCTTCCHHH-------HHHHHTCHHHHHHCCEEEEESCTTCCHHHH-HHGGGCTTCCEEEEESCT
T ss_pred CCCCCCEEEeCCCCccCHHH-------HHHHHhcccccCCCCEEEcCCCCcCCHHHH-HHHhcCCCCCEEECCCCC
Confidence 67889999998884 55210 0112332 478999998874 663211 125678889999988763
|
| >3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A | Back alignment and structure |
|---|
Probab=94.42 E-value=0.0072 Score=55.51 Aligned_cols=85 Identities=11% Similarity=0.107 Sum_probs=52.8
Q ss_pred CeEEEEeCCCCCcccCcchhcCCccCceeecccCc-ccCCCCcCcccccccccccccceecCCCCCCcCC----CCCCcE
Q 042825 98 QVTNIELQDQNRKGTVPPILKKLSSMAVMYLENNQ-LRGPIPSLVGSLEFFSAYEANISGTIPDFIGTDT----FPQLSY 172 (631)
Q Consensus 98 ~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~L~~N~-l~g~lP~~~~~L~~L~l~~n~l~g~ip~~~~~~~----l~~L~~ 172 (631)
++++|||+++.++..==..+.++++|+.|+|+++. ++.. .|. .+. . .++|++
T Consensus 62 ~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~------gL~---------------~L~--~~~~~~~~L~~ 118 (176)
T 3e4g_A 62 KIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDG------CLE---------------RLS--QLENLQKSMLE 118 (176)
T ss_dssp CEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHH------HHH---------------HHH--TCHHHHHHCCE
T ss_pred eEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHH------HHH---------------HHH--hcccccCCCCE
Confidence 68888888888764322346778888888888874 5421 000 011 1 246888
Q ss_pred EEccCCc-ccccCCCCCCCCccCcCCCCCCCEEEeecCc-Cc
Q 042825 173 LDLGNNN-LQGTIPSSFGMPFADISNLSTLEDLSLGHNK-LT 212 (631)
Q Consensus 173 L~Ls~N~-l~g~iP~~~~~~~~~~~~l~~L~~L~L~~N~-l~ 212 (631)
|||+++. +|.. .+..+.++++|+.|+|++.. ++
T Consensus 119 L~Ls~C~~ITD~-------Gl~~L~~~~~L~~L~L~~c~~It 153 (176)
T 3e4g_A 119 MEIISCGNVTDK-------GIIALHHFRNLKYLFLSDLPGVK 153 (176)
T ss_dssp EEEESCTTCCHH-------HHHHGGGCTTCCEEEEESCTTCC
T ss_pred EEcCCCCcCCHH-------HHHHHhcCCCCCEEECCCCCCCC
Confidence 8888864 6521 01124578888888888875 44
|
| >1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1 | Back alignment and structure |
|---|
Probab=93.97 E-value=0.0046 Score=57.95 Aligned_cols=117 Identities=9% Similarity=0.154 Sum_probs=62.4
Q ss_pred CCeEEEEeCCC-CCcc----cCcchhcCCccCceeecccCcccCCCCcCcccccccccccccceecCCCCCCcCCCCCCc
Q 042825 97 GQVTNIELQDQ-NRKG----TVPPILKKLSSMAVMYLENNQLRGPIPSLVGSLEFFSAYEANISGTIPDFIGTDTFPQLS 171 (631)
Q Consensus 97 ~~l~~l~l~~n-~l~g----~ip~~~~~l~~L~~L~L~~N~l~g~lP~~~~~L~~L~l~~n~l~g~ip~~~~~~~l~~L~ 171 (631)
..++.|+|++| .+.. .+-..+..-+.|+.|+|++|+|...--.. |-..+. .-+.|+
T Consensus 41 ~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~a-----------------lA~aL~--~N~tL~ 101 (197)
T 1pgv_A 41 TDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARG-----------------LIELIE--TSPSLR 101 (197)
T ss_dssp SSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTT-----------------HHHHHH--HCSSCC
T ss_pred CCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHH-----------------HHHHHh--cCCccC
Confidence 35777787775 5542 24445566667777777777775210000 111111 124688
Q ss_pred EEEccCCcccccCCCCCCCCccCcCCCCCCCEEEeecCc---Cccc----CChhhccCCCCCCEEEccCCCC
Q 042825 172 YLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNK---LTGI----FPVSSFNNHPKLTTLNLTNNLL 236 (631)
Q Consensus 172 ~L~Ls~N~l~g~iP~~~~~~~~~~~~l~~L~~L~L~~N~---l~g~----iP~~~~~~l~~L~~L~ls~N~l 236 (631)
.|+|++|+|+..--..+. ..+..-+.|++|+|++|. +... |-. .+..-+.|+.|+++.|..
T Consensus 102 ~L~L~~N~Ig~~Ga~ala---~aL~~N~tL~~L~L~n~~~~~ig~~g~~~ia~-aL~~N~tL~~L~l~~~~~ 169 (197)
T 1pgv_A 102 VLNVESNFLTPELLARLL---RSTLVTQSIVEFKADNQRQSVLGNQVEMDMMM-AIEENESLLRVGISFASM 169 (197)
T ss_dssp EEECCSSBCCHHHHHHHH---HHTTTTCCCSEEECCCCSSCCCCHHHHHHHHH-HHHHCSSCCEEECCCCCH
T ss_pred eEecCCCcCCHHHHHHHH---HHHhhCCceeEEECCCCcCcCcCHHHHHHHHH-HHHhCCCcCeEeccCCCc
Confidence 888888887632110000 012344568888887653 3211 222 244557788888887754
|
| >1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1 | Back alignment and structure |
|---|
Probab=92.98 E-value=0.004 Score=58.37 Aligned_cols=63 Identities=16% Similarity=0.127 Sum_probs=42.8
Q ss_pred CCCcEEEccCCcccccCCCCCCCCccCcCCCCCCCEEEeecCcCccc----CChhhccCCCCCCEEEccCC
Q 042825 168 PQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGI----FPVSSFNNHPKLTTLNLTNN 234 (631)
Q Consensus 168 ~~L~~L~Ls~N~l~g~iP~~~~~~~~~~~~l~~L~~L~L~~N~l~g~----iP~~~~~~l~~L~~L~ls~N 234 (631)
+.|+.|+|++|++...--..+. ..+..-++|+.|+|++|+|+.. |-. .+..-+.|+.|+|++|
T Consensus 70 ~~L~~L~L~~n~igd~ga~alA---~aL~~N~tL~~L~L~~N~Ig~~Ga~ala~-aL~~N~tL~~L~L~n~ 136 (197)
T 1pgv_A 70 KHIEKFSLANTAISDSEARGLI---ELIETSPSLRVLNVESNFLTPELLARLLR-STLVTQSIVEFKADNQ 136 (197)
T ss_dssp SCCCEEECTTSCCBHHHHTTHH---HHHHHCSSCCEEECCSSBCCHHHHHHHHH-HTTTTCCCSEEECCCC
T ss_pred CCcCEEEccCCCCChHHHHHHH---HHHhcCCccCeEecCCCcCCHHHHHHHHH-HHhhCCceeEEECCCC
Confidence 5799999999999732111110 0133457899999999999843 111 2445567999999976
|
| >4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165} | Back alignment and structure |
|---|
Probab=92.65 E-value=0.24 Score=51.57 Aligned_cols=122 Identities=14% Similarity=0.245 Sum_probs=71.7
Q ss_pred CeEEEEeCCCCCcccCcchhcCCccCceeecccCcccCCCCcC-cc---cccccccccccceecCCCCCCcCCCCCCcEE
Q 042825 98 QVTNIELQDQNRKGTVPPILKKLSSMAVMYLENNQLRGPIPSL-VG---SLEFFSAYEANISGTIPDFIGTDTFPQLSYL 173 (631)
Q Consensus 98 ~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~L~~N~l~g~lP~~-~~---~L~~L~l~~n~l~g~ip~~~~~~~l~~L~~L 173 (631)
.++.+.+.++... .-...|.++..|+.+.+. +.++ .|+.. |. +|+.+.+.++ ++-.-...|. .+.+|+.+
T Consensus 266 ~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~-~~i~-~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~--~C~~L~~i 339 (394)
T 4gt6_A 266 YLASVKMPDSVVS-IGTGAFMNCPALQDIEFS-SRIT-ELPESVFAGCISLKSIDIPEG-ITQILDDAFA--GCEQLERI 339 (394)
T ss_dssp SCCEEECCTTCCE-ECTTTTTTCTTCCEEECC-TTCC-EECTTTTTTCTTCCEEECCTT-CCEECTTTTT--TCTTCCEE
T ss_pred cccEEecccccce-ecCcccccccccccccCC-Cccc-ccCceeecCCCCcCEEEeCCc-ccEehHhHhh--CCCCCCEE
Confidence 3445555443222 223467889999999986 3444 45543 32 7888888654 4422234455 78999999
Q ss_pred EccCCcccccCCCCCCCCccCcCCCCCCCEEEeecCcCcccCChhhccCCCCCCEEEccCCCCc
Q 042825 174 DLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNNLLQ 237 (631)
Q Consensus 174 ~Ls~N~l~g~iP~~~~~~~~~~~~l~~L~~L~L~~N~l~g~iP~~~~~~l~~L~~L~ls~N~l~ 237 (631)
.|..+ ++ .|... .|.+|++|+.+++.+|.... ..+....+|+.+.+..|.+.
T Consensus 340 ~ip~s-v~-~I~~~------aF~~C~~L~~i~~~~~~~~~----~~~~~~~~L~~i~i~~~~~~ 391 (394)
T 4gt6_A 340 AIPSS-VT-KIPES------AFSNCTALNNIEYSGSRSQW----NAISTDSGLQNLPVAPGSID 391 (394)
T ss_dssp EECTT-CC-BCCGG------GGTTCTTCCEEEESSCHHHH----HTCBCCCCC-----------
T ss_pred EECcc-cC-EEhHh------HhhCCCCCCEEEECCceeeh----hhhhccCCCCEEEeCCCCEE
Confidence 99654 65 56543 27799999999999987542 23667788999988777553
|
| >2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A | Back alignment and structure |
|---|
Probab=92.19 E-value=0.054 Score=36.73 Aligned_cols=29 Identities=17% Similarity=0.363 Sum_probs=16.0
Q ss_pred EEeehhhhhHHHHHHHHHHhhhhhcccCCC
Q 042825 351 ITLGSVIGDFCGLFVVGLGVFLYIRNKKSS 380 (631)
Q Consensus 351 ~ii~~v~~~~~~~~~~~~~~~~~~~~~~~~ 380 (631)
.++++++| +++++++++++++|.|||+.+
T Consensus 13 ~Ia~~vVG-vll~vi~~l~~~~~~RRR~~~ 41 (44)
T 2jwa_A 13 SIISAVVG-ILLVVVLGVVFGILIKRRQQK 41 (44)
T ss_dssp HHHHHHHH-HHHHHHHHHHHHHHHHHHCSC
T ss_pred chHHHHHH-HHHHHHHHHHHHhheehhhhh
Confidence 35566666 444445555555566665543
|
| >4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus} | Back alignment and structure |
|---|
Probab=91.77 E-value=0.77 Score=47.59 Aligned_cols=105 Identities=12% Similarity=0.125 Sum_probs=62.4
Q ss_pred chhcCCccCceeecccCc--ccCCCCcCcccccccccccccceecCCCCCCcCCCCCCcEEEccCCcccccCCCCCCCCc
Q 042825 115 PILKKLSSMAVMYLENNQ--LRGPIPSLVGSLEFFSAYEANISGTIPDFIGTDTFPQLSYLDLGNNNLQGTIPSSFGMPF 192 (631)
Q Consensus 115 ~~~~~l~~L~~L~L~~N~--l~g~lP~~~~~L~~L~l~~n~l~g~ip~~~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~~~ 192 (631)
.......+|+.+.+..+. +....-....+|+.+.+..+..+ .-...+. .+..|+.+.+..+. +|...
T Consensus 224 ~~~~~~~~l~~i~ip~~~~~i~~~~f~~~~~l~~~~~~~~~~~-i~~~~F~--~~~~l~~~~~~~~~----i~~~~---- 292 (394)
T 4fs7_A 224 DFALSKTGVKNIIIPDSFTELGKSVFYGCTDLESISIQNNKLR-IGGSLFY--NCSGLKKVIYGSVI----VPEKT---- 292 (394)
T ss_dssp TTTTTTCCCCEEEECTTCCEECSSTTTTCSSCCEEEECCTTCE-ECSCTTT--TCTTCCEEEECSSE----ECTTT----
T ss_pred hhhcccCCCceEEECCCceecccccccccccceeEEcCCCcce-eeccccc--cccccceeccCcee----ecccc----
Confidence 334445677777765432 11111111225666666665443 2223333 66788888776654 33221
Q ss_pred cCcCCCCCCCEEEeecCcCcccCChhhccCCCCCCEEEccCC
Q 042825 193 ADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNN 234 (631)
Q Consensus 193 ~~~~~l~~L~~L~L~~N~l~g~iP~~~~~~l~~L~~L~ls~N 234 (631)
+..+.+|+.+.+..| ++ .|+...|.++.+|+.++|.++
T Consensus 293 --F~~~~~L~~i~l~~~-i~-~I~~~aF~~c~~L~~i~lp~~ 330 (394)
T 4fs7_A 293 --FYGCSSLTEVKLLDS-VK-FIGEEAFESCTSLVSIDLPYL 330 (394)
T ss_dssp --TTTCTTCCEEEECTT-CC-EECTTTTTTCTTCCEECCCTT
T ss_pred --ccccccccccccccc-cc-eechhhhcCCCCCCEEEeCCc
Confidence 557888888888765 55 677777888888999988654
|
| >4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum} | Back alignment and structure |
|---|
Probab=91.72 E-value=1.1 Score=45.92 Aligned_cols=66 Identities=18% Similarity=0.292 Sum_probs=44.9
Q ss_pred CCCCCcEEEccCCcccccCCCCCCCCccCcCCCCCCCEEEeecCcCcccCChhhccCCCCCCEEEccCCCCcccCC
Q 042825 166 TFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNNLLQGPTP 241 (631)
Q Consensus 166 ~l~~L~~L~Ls~N~l~g~iP~~~~~~~~~~~~l~~L~~L~L~~N~l~g~iP~~~~~~l~~L~~L~ls~N~l~g~~p 241 (631)
.+.+|+.+.+..+ ++ .|.... +.++.+|+.+.+..+ ++ .++...|..+.+|+.+.+.+|.++..-.
T Consensus 238 ~~~~L~~i~lp~~-v~-~I~~~a------F~~~~~l~~i~l~~~-i~-~i~~~aF~~c~~L~~i~l~~~~i~~I~~ 303 (379)
T 4h09_A 238 GMKALDEIAIPKN-VT-SIGSFL------LQNCTALKTLNFYAK-VK-TVPYLLCSGCSNLTKVVMDNSAIETLEP 303 (379)
T ss_dssp TCSSCCEEEECTT-CC-EECTTT------TTTCTTCCEEEECCC-CS-EECTTTTTTCTTCCEEEECCTTCCEECT
T ss_pred CCccceEEEcCCC-cc-EeCccc------cceeehhcccccccc-ce-eccccccccccccccccccccccceehh
Confidence 5677888877655 44 444332 567788888888654 55 5666668888888888888777765433
|
| >2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A | Back alignment and structure |
|---|
Probab=90.12 E-value=0.076 Score=35.02 Aligned_cols=29 Identities=14% Similarity=0.068 Sum_probs=18.4
Q ss_pred EEEEeehhhhhHHHHHHHHHHhhhhhccc
Q 042825 349 LGITLGSVIGDFCGLFVVGLGVFLYIRNK 377 (631)
Q Consensus 349 ~~~ii~~v~~~~~~~~~~~~~~~~~~~~~ 377 (631)
.+.++++++|.++++++++.++++++|||
T Consensus 10 ~GaIAGiVvG~v~gv~li~~l~~~~~rrr 38 (38)
T 2k1k_A 10 GGEIVAVIFGLLLGAALLLGILVFRSRRA 38 (38)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_pred CCceeeeehHHHHHHHHHHHHHHHHeecC
Confidence 45567777777777666666666555543
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 631 | ||||
| d1uwha_ | 276 | d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) | 3e-29 | |
| d1qpca_ | 272 | d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom | 1e-25 | |
| d1sm2a_ | 263 | d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu | 1e-23 | |
| d1s9ja_ | 322 | d.144.1.7 (A:) Dual specificity mitogen-activated | 1e-23 | |
| d1k2pa_ | 258 | d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum | 2e-23 | |
| d1fmka3 | 285 | d.144.1.7 (A:249-533) c-src tyrosine kinase {Human | 3e-23 | |
| d1xbba_ | 277 | d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human | 2e-22 | |
| d2java1 | 269 | d.144.1.7 (A:3-271) Serine/threonine-protein kinas | 3e-22 | |
| d1lufa_ | 301 | d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n | 7e-22 | |
| d1t4ha_ | 270 | d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa | 2e-21 | |
| d2j4za1 | 263 | d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur | 4e-21 | |
| d1nvra_ | 271 | d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 { | 5e-21 | |
| d1mqba_ | 283 | d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum | 7e-21 | |
| d1u59a_ | 285 | d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum | 1e-20 | |
| d1jpaa_ | 299 | d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou | 2e-20 | |
| d1fvra_ | 309 | d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [ | 3e-20 | |
| d1byga_ | 262 | d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) | 8e-20 | |
| d1r0pa_ | 311 | d.144.1.7 (A:) Hepatocyte growth factor receptor, | 2e-19 | |
| d1xkka_ | 317 | d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb- | 2e-19 | |
| d1vjya_ | 303 | d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human | 3e-19 | |
| d1p4oa_ | 308 | d.144.1.7 (A:) Insulin-like growth factor 1 recept | 3e-19 | |
| d1opja_ | 287 | d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou | 4e-19 | |
| d1u46a_ | 273 | d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum | 7e-19 | |
| d1u5ra_ | 309 | d.144.1.7 (A:) Serine/threonine protein kinase TAO | 4e-18 | |
| d2jfla1 | 288 | d.144.1.7 (A:21-308) STE20-like serine/threonine-p | 6e-18 | |
| d1t46a_ | 311 | d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens | 1e-17 | |
| d1yhwa1 | 293 | d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [ | 2e-17 | |
| d1rjba_ | 325 | d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s | 2e-17 | |
| d1uu3a_ | 288 | d.144.1.7 (A:) 3-phosphoinositide dependent protei | 3e-17 | |
| d1o6ya_ | 277 | d.144.1.7 (A:) Mycobacterial protein kinase PknB, | 9e-17 | |
| d1mp8a_ | 273 | d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma | 4e-16 | |
| d2omza2 | 384 | c.10.2.1 (A:33-416) Internalin A {Listeria monocyt | 5e-16 | |
| d2omza2 | 384 | c.10.2.1 (A:33-416) Internalin A {Listeria monocyt | 9e-12 | |
| d2omza2 | 384 | c.10.2.1 (A:33-416) Internalin A {Listeria monocyt | 6e-07 | |
| d2omza2 | 384 | c.10.2.1 (A:33-416) Internalin A {Listeria monocyt | 1e-06 | |
| d2omza2 | 384 | c.10.2.1 (A:33-416) Internalin A {Listeria monocyt | 9e-05 | |
| d1fgka_ | 299 | d.144.1.7 (A:) Fibroblast growth factor receptor 1 | 7e-16 | |
| d1ywna1 | 299 | d.144.1.7 (A:818-1166) Vascular endothelial growth | 8e-16 | |
| d1ob3a_ | 286 | d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod | 1e-15 | |
| d1ckia_ | 299 | d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n | 2e-15 | |
| d1koaa2 | 350 | d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C | 2e-15 | |
| d1xjda_ | 320 | d.144.1.7 (A:) Protein kinase C, theta type {Human | 5e-15 | |
| d1a06a_ | 307 | d.144.1.7 (A:) Calmodulin-dependent protein kinase | 6e-15 | |
| d1csna_ | 293 | d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast | 7e-15 | |
| d1koba_ | 352 | d.144.1.7 (A:) Twitchin, kinase domain {California | 4e-14 | |
| d1blxa_ | 305 | d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H | 4e-14 | |
| d1gz8a_ | 298 | d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H | 6e-14 | |
| d1omwa3 | 364 | d.144.1.7 (A:186-549) G-protein coupled receptor k | 1e-13 | |
| d1jksa_ | 293 | d.144.1.7 (A:) Death-associated protein kinase, Da | 1e-13 | |
| d1fota_ | 316 | d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni | 3e-13 | |
| d3blha1 | 318 | d.144.1.7 (A:8-325) Cell division protein kinase 9 | 4e-13 | |
| d1xwsa_ | 273 | d.144.1.7 (A:) Proto-oncogene serine/threonine-pro | 5e-13 | |
| d1pmea_ | 345 | d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien | 1e-12 | |
| d1phka_ | 277 | d.144.1.7 (A:) gamma-subunit of glycogen phosphory | 1e-12 | |
| d1tkia_ | 321 | d.144.1.7 (A:) Titin, kinase domain {Human (Homo s | 2e-12 | |
| d1o6la_ | 337 | d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap | 2e-12 | |
| d1ua2a_ | 299 | d.144.1.7 (A:) Cell division protein kinase 7, CDK | 2e-11 | |
| d1cm8a_ | 346 | d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s | 2e-11 | |
| d1q5ka_ | 350 | d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs | 4e-11 | |
| d1unla_ | 292 | d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H | 5e-11 | |
| d2b1pa1 | 355 | d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3 | 2e-10 | |
| d2ozaa1 | 335 | d.144.1.7 (A:51-385) MAP kinase activated protein | 6e-10 | |
| d1ogqa_ | 313 | c.10.2.8 (A:) Polygalacturonase inhibiting protein | 2e-09 | |
| d1ogqa_ | 313 | c.10.2.8 (A:) Polygalacturonase inhibiting protein | 4e-09 | |
| d1ogqa_ | 313 | c.10.2.8 (A:) Polygalacturonase inhibiting protein | 1e-06 | |
| d1ogqa_ | 313 | c.10.2.8 (A:) Polygalacturonase inhibiting protein | 2e-06 | |
| d1ogqa_ | 313 | c.10.2.8 (A:) Polygalacturonase inhibiting protein | 5e-05 | |
| d1ogqa_ | 313 | c.10.2.8 (A:) Polygalacturonase inhibiting protein | 2e-04 | |
| d1rdqe_ | 350 | d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni | 3e-09 | |
| d1dcea3 | 124 | c.10.2.2 (A:444-567) Rab geranylgeranyltransferase | 6e-09 | |
| d1dcea3 | 124 | c.10.2.2 (A:444-567) Rab geranylgeranyltransferase | 1e-07 | |
| d1dcea3 | 124 | c.10.2.2 (A:444-567) Rab geranylgeranyltransferase | 3e-04 | |
| d2gfsa1 | 348 | d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa | 2e-08 | |
| d3bqca1 | 328 | d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu | 2e-08 | |
| d1xkua_ | 305 | c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 99 | 2e-08 | |
| d1xkua_ | 305 | c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 99 | 8e-08 | |
| d1xkua_ | 305 | c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 99 | 1e-07 | |
| d1xkua_ | 305 | c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 99 | 2e-07 | |
| d1vzoa_ | 322 | d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5 | 5e-08 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 5e-07 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 1e-05 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 4e-05 | |
| d1jl5a_ | 353 | c.10.2.6 (A:) Leucine rich effector protein YopM { | 4e-06 | |
| d1jl5a_ | 353 | c.10.2.6 (A:) Leucine rich effector protein YopM { | 3e-05 | |
| d1h6ua2 | 227 | c.10.2.1 (A:36-262) Internalin H {Listeria monocyt | 9e-06 | |
| d1h6ua2 | 227 | c.10.2.1 (A:36-262) Internalin H {Listeria monocyt | 2e-04 | |
| d1h6ua2 | 227 | c.10.2.1 (A:36-262) Internalin H {Listeria monocyt | 8e-04 | |
| d1h6ua2 | 227 | c.10.2.1 (A:36-262) Internalin H {Listeria monocyt | 0.004 | |
| d1q8ya_ | 362 | d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces | 1e-05 | |
| d1q8ya_ | 362 | d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces | 0.002 | |
| d1m9la_ | 198 | c.10.3.1 (A:) Outer arm dynein light chain 1 {Gree | 1e-05 | |
| d2ca6a1 | 344 | c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal dom | 2e-05 | |
| d2ca6a1 | 344 | c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal dom | 2e-04 | |
| d1zara2 | 191 | d.144.1.9 (A:91-281) Rio2 serine protein kinase C- | 7e-05 | |
| d2astb2 | 284 | c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p1 | 7e-05 | |
| d2astb2 | 284 | c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p1 | 0.003 | |
| d1p9ag_ | 266 | c.10.2.7 (G:) von Willebrand factor binding domain | 8e-05 | |
| d1xwdc1 | 242 | c.10.2.7 (C:18-259) Follicle-stimulating hormone r | 8e-05 | |
| d1h6ta2 | 210 | c.10.2.1 (A:31-240) Internalin B {Listeria monocyt | 4e-04 | |
| d1a9na_ | 162 | c.10.2.4 (A:) Splicesomal U2A' protein {Human (Hom | 0.001 |
| >d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: B-Raf kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 115 bits (288), Expect = 3e-29
Identities = 48/222 (21%), Positives = 85/222 (38%), Gaps = 60/222 (27%)
Query: 418 NNFSEENRLGRGGVGTVYKGELKDGTEVGVKRMELGSVTEQGIAQFESEITVLTK----- 472
+ R+G G GTVYKG+ +V VK + + + T Q + F++E+ VL K
Sbjct: 8 GQITVGQRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVN 65
Query: 473 ----------------------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARGDD--- 507
+L HL E E ++IA A+G D
Sbjct: 66 ILLFMGYSTAPQLAIVTQWCEGSSLYHHLHIIE----TKFEMIKLIDIARQTAQGMDYLH 121
Query: 508 ---------------------MRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVT- 545
+++ DFGL + +++G+ ++APE I
Sbjct: 122 AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQ 181
Query: 546 --GRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLA 585
+ + DVY+FG++L +L+TG+ ++ + I +
Sbjct: 182 DKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVG 223
|
| >d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Lymphocyte kinase (lck) species: Human (Homo sapiens) [TaxId: 9606]
Score = 104 bits (261), Expect = 1e-25
Identities = 50/223 (22%), Positives = 83/223 (37%), Gaps = 58/223 (26%)
Query: 418 NNFSEENRLGRGGVGTVYKGELKDGTEVGVKRMELGSVTEQGIAQFESEITVLTK----- 472
RLG G G V+ G T+V VK ++ GS++ F +E ++ +
Sbjct: 13 ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD---AFLAEANLMKQLQHQR 69
Query: 473 ----------------------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG----- 505
G+L L L N L++A +A G
Sbjct: 70 LVRLYAVVTQEPIYIITEYMENGSLVDFLKT---PSGIKLTINKLLDMAAQIAEGMAFIE 126
Query: 506 -------------------DDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTG 546
++ADFGL RL+ +N + + APE I G
Sbjct: 127 ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTA-REGAKFPIKWTAPEAINYG 185
Query: 547 RITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQ 589
T K DV+SFG++L +++T ++ ++PE I +L ++
Sbjct: 186 TFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYR 228
|
| >d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase Itk/Tsk species: Human (Homo sapiens) [TaxId: 9606]
Score = 99.0 bits (246), Expect = 1e-23
Identities = 40/220 (18%), Positives = 84/220 (38%), Gaps = 52/220 (23%)
Query: 418 NNFSEENRLGRGGVGTVYKGELKDGTEVGVKRMELGSVTEQGIAQFESEITVL------- 470
+ + +G G G V+ G + +V +K + G+++E+ F E V+
Sbjct: 5 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEE---DFIEEAEVMMKLSHPK 61
Query: 471 ---------TKGTL--------GRHLFNWEEEGLEPLEWNTRLNIALDVARG-------- 505
+ + L ++ T L + LDV G
Sbjct: 62 LVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC 121
Query: 506 ----------------DDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRIT 549
++V+DFG+ R V ++ +++ T + +PE R +
Sbjct: 122 VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD-QYTSSTGTKFPVKWASPEVFSFSRYS 180
Query: 550 AKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQ 589
+K DV+SFG+++ ++ + K+ S+ E + ++T F+
Sbjct: 181 SKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFR 220
|
| >d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 100 bits (249), Expect = 1e-23
Identities = 40/266 (15%), Positives = 86/266 (32%), Gaps = 57/266 (21%)
Query: 416 ATNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVL---- 470
++F + + LG G G V+K K G + K + L + Q E+ VL
Sbjct: 4 KDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHL-EIKPAIRNQIIRELQVLHECN 62
Query: 471 ------------TKGTL--------GRHLFNWEEEGLEPLEWNTRLNIALDVARG----- 505
+ G + G L ++ + +++ V +G
Sbjct: 63 SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKA-GRIPEQILGKVSIAVIKGLTYLR 121
Query: 506 --------------------DDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVT 545
++++ DFG+ + + S+ GT Y++PE +
Sbjct: 122 EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID----SMANSFVGTRSYMSPERLQG 177
Query: 546 GRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQKMHKNHDTFQMAIDKT 605
+ + D++S G+ L+++ GR + + E + + +
Sbjct: 178 THYSVQSDIWSMGLSLVEMAVGRYPIPPPDAK-ELELMFGCQVEGDAAETPPRPRTPGRP 236
Query: 606 IQLDEENLANVSTVAELGDHCCANEP 631
+ + + EL D+ P
Sbjct: 237 LSSYGMDSRPPMAIFELLDYIVNEPP 262
|
| >d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Bruton's tyrosine kinase (Btk) species: Human (Homo sapiens) [TaxId: 9606]
Score = 97.5 bits (242), Expect = 2e-23
Identities = 39/238 (16%), Positives = 83/238 (34%), Gaps = 61/238 (25%)
Query: 418 NNFSEENRLGRGGVGTVYKGELKDGTEVGVKRMELGSVTEQGIAQFESEITVLTK----- 472
+ + LG G G V G+ + +V +K ++ GS++E +F E V+
Sbjct: 4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSED---EFIEEAKVMMNLSHEK 60
Query: 473 -----------------------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG---- 505
G L +L + L + DV
Sbjct: 61 LVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRH----RFQTQQLLEMCKDVCEAMEYL 116
Query: 506 --------------------DDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVT 545
++V+DFGL R V ++ S + PE ++
Sbjct: 117 ESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTS-SVGSKFPVRWSPPEVLMY 175
Query: 546 GRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQKMHKNHDTFQMAID 603
+ ++K D+++FG+++ ++ + K+ ++ E H+A ++++ H +
Sbjct: 176 SKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGL-RLYRPHLASEKVYT 232
|
| >d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-src tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 97.9 bits (243), Expect = 3e-23
Identities = 48/212 (22%), Positives = 83/212 (39%), Gaps = 52/212 (24%)
Query: 418 NNFSEENRLGRGGVGTVYKGELKDGTEVGVKRMELGSVTEQGIAQFESEITVLTKG---- 473
+ E +LG+G G V+ G T V +K ++ G+++ + F E V+ K
Sbjct: 17 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE---AFLQEAQVMKKLRHEK 73
Query: 474 --------------------TLGRHLFNWEEEGLEPLEWNTRLNIALDVAR--------- 504
+ G L + E + L +++A +A
Sbjct: 74 LVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN 133
Query: 505 -------------GDDM--RVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRIT 549
G+++ +VADFGL RL+ +N + + APE + GR T
Sbjct: 134 YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTA-RQGAKFPIKWTAPEAALYGRFT 192
Query: 550 AKVDVYSFGMILMDLITGRKVVDATHSDPEYI 581
K DV+SFG++L +L T +V + E +
Sbjct: 193 IKSDVWSFGILLTELTTKGRVPYPGMVNREVL 224
|
| >d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase SYK species: Human (Homo sapiens) [TaxId: 9606]
Score = 95.2 bits (236), Expect = 2e-22
Identities = 34/203 (16%), Positives = 68/203 (33%), Gaps = 60/203 (29%)
Query: 422 EENRLGRGGVGTVYKGELKD---GTEVGVKRMELGSVTEQGIAQFESEITVLTK------ 472
E+ LG G GTV KG + V VK ++ + + +E V+ +
Sbjct: 11 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 70
Query: 473 ---------------------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------ 505
G L ++L ++ + + V+ G
Sbjct: 71 VRMIGICEAESWMLVMEMAELGPLNKYLQQNR-----HVKDKNIIELVHQVSMGMKYLEE 125
Query: 506 ------------------DDMRVADFGLVRLVPENGKH-SILTKVAGTFGYLAPEYIVTG 546
+++DFGL + + + + T + APE I
Sbjct: 126 SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYY 185
Query: 547 RITAKVDVYSFGMILMDLITGRK 569
+ ++K DV+SFG+++ + + +
Sbjct: 186 KFSSKSDVWSFGVLMWEAFSYGQ 208
|
| >d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine-protein kinase Nek2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 94.7 bits (235), Expect = 3e-22
Identities = 36/210 (17%), Positives = 67/210 (31%), Gaps = 63/210 (30%)
Query: 419 NFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK----- 472
++ +G G G K K DG + K ++ GS+TE SE+ +L +
Sbjct: 5 DYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPN 64
Query: 473 -------------------------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG-- 505
G L + +E + L+ L + +
Sbjct: 65 IVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKER-QYLDEEFVLRVMTQLTLALK 123
Query: 506 ---------------------------DDMRVADFGLVRLVPENGKHSILTKVAGTFGYL 538
++++ DFGL R++ + + GT Y+
Sbjct: 124 ECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFA--KAFVGTPYYM 181
Query: 539 APEYIVTGRITAKVDVYSFGMILMDLITGR 568
+PE + K D++S G +L +L
Sbjct: 182 SPEQMNRMSYNEKSDIWSLGCLLYELCALM 211
|
| >d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Musk tyrosine kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 94.1 bits (233), Expect = 7e-22
Identities = 44/252 (17%), Positives = 76/252 (30%), Gaps = 78/252 (30%)
Query: 410 IQVLRNATNNFSEENRLGRGGVGTVYKGELK------DGTEVGVKRMELGSVTEQGIAQF 463
+ L NN +G G G V++ T V VK ++ + A F
Sbjct: 5 LLSLEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKE-EASADMQADF 63
Query: 464 ESEITVLTK----------------------------GTLGRHLFN-------------- 481
+ E ++ + G L L +
Sbjct: 64 QREAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDL 123
Query: 482 -----WEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVAD 512
G PL +L IA VA G +++AD
Sbjct: 124 STRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIAD 183
Query: 513 FGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVD 572
FGL R + + A ++ PE I R T + DV+++G++L ++ +
Sbjct: 184 FGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPY 243
Query: 573 ATHSDPEYIIHL 584
+ E I ++
Sbjct: 244 YGMAHEEVIYYV 255
|
| >d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase wnk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 92.0 bits (228), Expect = 2e-21
Identities = 38/241 (15%), Positives = 74/241 (30%), Gaps = 70/241 (29%)
Query: 423 ENRLGRGGVGTVYKGELKD-GTEVGVKRMELGSVTEQGIAQFESEITVLTK--------- 472
+ +GRG TVYKG + EV ++ +T+ +F+ E +L
Sbjct: 14 DIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRF 73
Query: 473 -----------------------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARGDDM- 508
GTL +L ++ ++ + + +G
Sbjct: 74 YDSWESTVKGKKCIVLVTELMTSGTLKTYLKRFK-----VMKIKVLRSWCRQILKGLQFL 128
Query: 509 --------------------------RVADFGLVRLVPENGKHSILTKVAGTFGYLAPEY 542
++ D GL L + S V GT ++APE
Sbjct: 129 HTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLK----RASFAKAVIGTPEFMAPEM 184
Query: 543 IVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQKMHKNHDTFQMAI 602
+ VDVY+FGM ++++ T + + + + + +
Sbjct: 185 Y-EEKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEVK 243
Query: 603 D 603
+
Sbjct: 244 E 244
|
| >d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Aurora-related kinase 1 (aurora-2) species: Human (Homo sapiens) [TaxId: 9606]
Score = 91.2 bits (226), Expect = 4e-21
Identities = 35/205 (17%), Positives = 65/205 (31%), Gaps = 63/205 (30%)
Query: 418 NNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGI-AQFESEITVLTK--- 472
+F LG+G G VY K + +K + + + G+ Q E+ + +
Sbjct: 6 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 65
Query: 473 -------------------------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG-- 505
GT+ R L + ++A
Sbjct: 66 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL-----SKFDEQRTATYITELANALS 120
Query: 506 ----------------------DDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYI 543
++++ADFG P + + + + GT YL PE I
Sbjct: 121 YCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTT----LCGTLDYLPPEMI 176
Query: 544 VTGRITAKVDVYSFGMILMDLITGR 568
KVD++S G++ + + G+
Sbjct: 177 EGRMHDEKVDLWSLGVLCYEFLVGK 201
|
| >d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell cycle checkpoint kinase chk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 91.2 bits (226), Expect = 5e-21
Identities = 36/235 (15%), Positives = 69/235 (29%), Gaps = 50/235 (21%)
Query: 418 NNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK---- 472
++ LG G G V + V VK +++ + + EI +
Sbjct: 5 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDC-PENIKKEICINKMLNHE 63
Query: 473 --------GTLGRHLFNWEE-----------EGLEPLEWNTRLNIALDVARG-------- 505
G + + E E + + G
Sbjct: 64 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 123
Query: 506 ----------------DDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRI- 548
D+++++DFGL + N + +L K+ GT Y+APE +
Sbjct: 124 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 183
Query: 549 TAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQKMHKNHDTFQMAID 603
VDV+S G++L ++ G D + ++ +
Sbjct: 184 AEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLA 238
|
| >d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: epha2 receptor tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 91.1 bits (225), Expect = 7e-21
Identities = 39/221 (17%), Positives = 78/221 (35%), Gaps = 55/221 (24%)
Query: 418 NNFSEENRLGRGGVGTVYKGELKDGTE-----VGVKRMELGSVTEQGIAQFESEITVLTK 472
+ + + +G G G VYKG LK + V +K ++ G TE+ F E ++ +
Sbjct: 7 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGY-TEKQRVDFLGEAGIMGQ 65
Query: 473 ------------------------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARGDDM 508
L + E + + +A G
Sbjct: 66 FSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKY 125
Query: 509 ------------------------RVADFGLVRLVPENGKHSI-LTKVAGTFGYLAPEYI 543
+V+DFGL R++ ++ + + + + APE I
Sbjct: 126 LANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAI 185
Query: 544 VTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHL 584
+ T+ DV+SFG+++ +++T + S+ E + +
Sbjct: 186 SYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAI 226
|
| >d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase ZAP-70 species: Human (Homo sapiens) [TaxId: 9606]
Score = 90.2 bits (223), Expect = 1e-20
Identities = 37/273 (13%), Positives = 85/273 (31%), Gaps = 65/273 (23%)
Query: 413 LRNATNNFS-EENRLGRGGVGTVYKGELK---DGTEVGVKRMELGSVTEQGIAQFESEIT 468
L +N + LG G G+V +G + +V +K ++ G+ + + E
Sbjct: 3 LFLKRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGT-EKADTEEMMREAQ 61
Query: 469 VLTK---------------------------GTLGRHLFNWEEEGLEPLEWNTRLNIALD 501
++ + G L + L E + + +
Sbjct: 62 IMHQLDNPYIVRLIGVCQAEALMLVMEMAGGGPLHKFLVGKRE----EIPVSNVAELLHQ 117
Query: 502 VARG------------------------DDMRVADFGLVRLVPENGKHSILTK-VAGTFG 536
V+ G +++DFGL + + + +
Sbjct: 118 VSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLK 177
Query: 537 YLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQKMHKNHD 596
+ APE I + +++ DV+S+G+ + + ++ + PE ++ ++M +
Sbjct: 178 WYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPE-VMAFIEQGKRMECPPE 236
Query: 597 TFQMAID---KTIQLDEENLANVSTVAELGDHC 626
E+ + TV + C
Sbjct: 237 CPPELYALMSDCWIYKWEDRPDFLTVEQRMRAC 269
|
| >d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: ephb2 receptor tyrosine kinase species: Mouse (Mus musculus) [TaxId: 10090]
Score = 90.2 bits (223), Expect = 2e-20
Identities = 39/233 (16%), Positives = 78/233 (33%), Gaps = 65/233 (27%)
Query: 413 LRNATNNFSEE---------NRLGRGGVGTVYKGELKDGTE----VGVKRMELGSVTEQG 459
A F++E +G G G V G LK + V +K ++ G TE+
Sbjct: 12 PNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSG-YTEKQ 70
Query: 460 IAQFESEITVL----------------TKGTL--------GRHLFNWEEEGLEPLEWNTR 495
F SE +++ + L ++ +
Sbjct: 71 RRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQL 130
Query: 496 LNIALDVARGDDM------------------------RVADFGLVRLVPENGKHSILTKV 531
+ + +A G +V+DFGL R + ++ T
Sbjct: 131 VGMLRGIAAGMKYLADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSA 190
Query: 532 AG---TFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYI 581
G + APE I + T+ DV+S+G+++ ++++ + ++ + I
Sbjct: 191 LGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVI 243
|
| >d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tie2 kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 89.5 bits (221), Expect = 3e-20
Identities = 53/281 (18%), Positives = 90/281 (32%), Gaps = 90/281 (32%)
Query: 418 NNFSEENRLGRGGVGTVYKGELKDG---TEVGVKRMELGSVTEQGIAQFESEITVLTK-- 472
N+ ++ +G G G V K +K + +KRM+ ++ F E+ VL K
Sbjct: 10 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKE-YASKDDHRDFAGELEVLCKLG 68
Query: 473 ---------------------------GTLGRHL-----------FNWEEEGLEPLEWNT 494
G L L F L
Sbjct: 69 HHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQ 128
Query: 495 RLNIALDVARG------------------------DDMRVADFGLVRLVPENGKHSILTK 530
L+ A DVARG ++ADFGL R K T
Sbjct: 129 LLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKK---TM 185
Query: 531 VAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQK 590
++A E + T DV+S+G++L ++++ P + A ++K
Sbjct: 186 GRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGT-------PYCGMTCAELYEK 238
Query: 591 MHKNHDTFQMAIDKTIQLDEENLANVSTVAELGDHCCANEP 631
+ + + ++K + D+E V +L C +P
Sbjct: 239 LPQGYR-----LEKPLNCDDE-------VYDLMRQCWREKP 267
|
| >d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Carboxyl-terminal src kinase (csk) species: Human (Homo sapiens) [TaxId: 9606]
Score = 87.4 bits (216), Expect = 8e-20
Identities = 39/217 (17%), Positives = 72/217 (33%), Gaps = 66/217 (30%)
Query: 418 NNFSEENRLGRGGVGTVYKGELKDGTEVGVKRMELGSVTEQGIAQFESEITVLTK----- 472
+G+G G V G+ + G +V VK ++ + F +E +V+T+
Sbjct: 7 KELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIK----NDATAQAFLAEASVMTQLRHSN 61
Query: 473 ------------------------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG--- 505
G+L +L + G L + L +LDV
Sbjct: 62 LVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRS---RGRSVLGGDCLLKFSLDVCEAMEY 118
Query: 506 -------------------DDMRV--ADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIV 544
+D +DFGL + S + APE +
Sbjct: 119 LEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEA-----SSTQDTGKLPVKWTAPEALR 173
Query: 545 TGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYI 581
+ + K DV+SFG++L ++ + +V + +
Sbjct: 174 EKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVV 210
|
| >d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Hepatocyte growth factor receptor, c-MET species: Human (Homo sapiens) [TaxId: 9606]
Score = 87.1 bits (215), Expect = 2e-19
Identities = 46/232 (19%), Positives = 80/232 (34%), Gaps = 65/232 (28%)
Query: 419 NFSEENRLGRGGVGTVYKGELKD----GTEVGVKRMELGSVTEQGIAQFESEITVL---- 470
+F+E +GRG G VY G L D VK + + ++QF +E ++
Sbjct: 30 HFNEV--IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRIT-DIGEVSQFLTEGIIMKDFS 86
Query: 471 -------------TKGTL--------GRHLFNWEEEGLEPLEWNTRLNIALDVARG---- 505
++G+ L N+ + L VA+G
Sbjct: 87 HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL 146
Query: 506 --------------------DDMRVADFGLVRLVPENGKHSI--LTKVAGTFGYLAPEYI 543
++VADFGL R + + S+ T ++A E +
Sbjct: 147 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESL 206
Query: 544 VTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQKMHKNH 595
T + T K DV+SFG++L +L+T P ++ + +
Sbjct: 207 QTQKFTTKSDVWSFGVLLWELMTRGAP-------PYPDVNTFDITVYLLQGR 251
|
| >d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: EGF receptor tyrosine kinase, Erbb-1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 87.2 bits (215), Expect = 2e-19
Identities = 37/212 (17%), Positives = 71/212 (33%), Gaps = 55/212 (25%)
Query: 410 IQVLRNATNNFSEENRLGRGGVGTVYKGELKD-----GTEVGVKRMELGSVTEQGIAQFE 464
+++L+ F + LG G GTVYKG V +K + + + + +
Sbjct: 3 LRILKE--TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT-SPKANKEIL 59
Query: 465 SEITVLTK-----------------------GTLGRHLFNWEEEGLEPLEWNTRLNIALD 501
E V+ L ++ E + + LN +
Sbjct: 60 DEAYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ 119
Query: 502 VARG------------------------DDMRVADFGLVRLVPENGKHSILTKVAGTFGY 537
+A+G +++ DFGL +L+ K +
Sbjct: 120 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 179
Query: 538 LAPEYIVTGRITAKVDVYSFGMILMDLITGRK 569
+A E I+ T + DV+S+G+ + +L+T
Sbjct: 180 MALESILHRIYTHQSDVWSYGVTVWELMTFGS 211
|
| >d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Type I TGF-beta receptor R4 species: Human (Homo sapiens) [TaxId: 9606]
Score = 86.4 bits (213), Expect = 3e-19
Identities = 39/283 (13%), Positives = 76/283 (26%), Gaps = 85/283 (30%)
Query: 423 ENRLGRGGVGTVYKGELKDGTEVGVKRMELGSVTEQGIAQFESEITVLTK---------- 472
+ +G+G G V++G+ + G EV VK E+EI
Sbjct: 8 QESIGKGRFGEVWRGKWR-GEEVAVKIFSSREERSW---FREAEIYQTVMLRHENILGFI 63
Query: 473 ----------------------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG----- 505
G+L +L + + +AL A G
Sbjct: 64 AADNKDNGTWTQLWLVSDYHEHGSLFDYLNR------YTVTVEGMIKLALSTASGLAHLH 117
Query: 506 ---------------------------DDMRVADFGLVRLVPENGKHS--ILTKVAGTFG 536
+AD GL GT
Sbjct: 118 MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKR 177
Query: 537 YLAPEYIVT------GRITAKVDVYSFGMILMDLITGRKV--VDATHSDPEYIIHLATWF 588
Y+APE + + D+Y+ G++ ++ + + + P Y + +
Sbjct: 178 YMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPS 237
Query: 589 QKMHKNHDTFQMAIDKTIQLDEENLANVSTVAELGDHCCANEP 631
+ + Q + I ++ + +A++ C
Sbjct: 238 VEEMRKVVCEQK-LRPNIPNRWQSCEALRVMAKIMRECWYANG 279
|
| >d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Insulin-like growth factor 1 receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 86.5 bits (213), Expect = 3e-19
Identities = 40/227 (17%), Positives = 78/227 (34%), Gaps = 64/227 (28%)
Query: 418 NNFSEENRLGRGGVGTVYKGELK------DGTEVGVKRMELGSVTEQGIAQFESEITVLT 471
+ LG+G G VY+G K T V +K + + + + +F +E +V+
Sbjct: 20 EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNE-AASMRERIEFLNEASVMK 78
Query: 472 K----------------------------GTLGRHLFNW-----EEEGLEPLEWNTRLNI 498
+ G L +L + L P + + +
Sbjct: 79 EFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQM 138
Query: 499 ALDVARGDDM------------------------RVADFGLVRLVPENGKHSILTKVAGT 534
A ++A G ++ DFG+ R + E + K
Sbjct: 139 AGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLP 198
Query: 535 FGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYI 581
+++PE + G T DV+SFG++L ++ T + S+ + +
Sbjct: 199 VRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVL 245
|
| >d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Abelsone tyrosine kinase (abl) species: Mouse (Mus musculus) [TaxId: 10090]
Score = 85.9 bits (212), Expect = 4e-19
Identities = 36/202 (17%), Positives = 71/202 (35%), Gaps = 54/202 (26%)
Query: 418 NNFSEENRLGRGGVGTVYKGELKD-GTEVGVKRMELGSVTEQGIAQFESEITVLTK---- 472
+ + +++LG G G VY+G K V VK ++ ++ + +F E V+ +
Sbjct: 17 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE---EFLKEAAVMKEIKHP 73
Query: 473 --------GTLGRHLFNWEEE-------------GLEPLEWNTRLNIALDVARGDDM--- 508
T + E + + L +A ++ +
Sbjct: 74 NLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEK 133
Query: 509 ---------------------RVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGR 547
+VADFGL RL+ + + + APE + +
Sbjct: 134 KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTA-HAGAKFPIKWTAPESLAYNK 192
Query: 548 ITAKVDVYSFGMILMDLITGRK 569
+ K DV++FG++L ++ T
Sbjct: 193 FSIKSDVWAFGVLLWEIATYGM 214
|
| >d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Activated CDC42 kinase 1, ACK1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 84.8 bits (209), Expect = 7e-19
Identities = 39/239 (16%), Positives = 79/239 (33%), Gaps = 53/239 (22%)
Query: 418 NNFSEENRLGRGGVGTVYKGELK----DGTEVGVKRMELGSVT-EQGIAQFESEITVLTK 472
+ +LG G G V +GE V VK ++ ++ + + F E+ +
Sbjct: 8 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 67
Query: 473 ---------------GTL--------GRHLFNWEEEGLEPLEWNTRLNIALDVARG---- 505
+ L + + T A+ VA G
Sbjct: 68 LDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYL 127
Query: 506 --------------------DDMRVADFGLVRLVPENGKHSIL-TKVAGTFGYLAPEYIV 544
D +++ DFGL+R +P+N H ++ F + APE +
Sbjct: 128 ESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLK 187
Query: 545 TGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQKMHKNHDTFQMAID 603
T + D + FG+ L ++ T + + + + + +++ + D Q +
Sbjct: 188 TRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIYN 246
|
| >d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine protein kinase TAO2 species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 83.1 bits (205), Expect = 4e-18
Identities = 35/202 (17%), Positives = 64/202 (31%), Gaps = 60/202 (29%)
Query: 420 FSEENRLGRGGVGTVYKGE-LKDGTEVGVKRMELGSV-TEQGIAQFESEITVL------- 470
FS+ +G G G VY +++ V +K+M + + E+ L
Sbjct: 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 76
Query: 471 ---------TKGTL--------GRHLFNWEEEGLEPLEWNTRLNIALDVARG-------- 505
+ T G E +PL+ + +G
Sbjct: 77 TIQYRGCYLREHTAWLVMEYCLGSASDLLEVHK-KPLQEVEIAAVTHGALQGLAYLHSHN 135
Query: 506 ----------------DDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVT---G 546
+++ DFG ++ GT ++APE I+ G
Sbjct: 136 MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA------NSFVGTPYWMAPEVILAMDEG 189
Query: 547 RITAKVDVYSFGMILMDLITGR 568
+ KVDV+S G+ ++L +
Sbjct: 190 QYDGKVDVWSLGITCIELAERK 211
|
| >d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: STE20-like serine/threonine-protein kinase, SLK species: Human (Homo sapiens) [TaxId: 9606]
Score = 82.3 bits (203), Expect = 6e-18
Identities = 36/208 (17%), Positives = 64/208 (30%), Gaps = 58/208 (27%)
Query: 415 NATNNFSEENRLGRGGVGTVYKGELKD-GTEVGVKRMELGSVTEQGIAQFESEITVL--- 470
N + + LG G G VYK + K+ K ++ S E+ + + EI +L
Sbjct: 9 NPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKS--EEELEDYMVEIDILASC 66
Query: 471 -------------TKGTL--------GRHLFNWEEEGLEPLEWNTRLNIALDVARG---- 505
+ L G + E PL + +
Sbjct: 67 DHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYL 126
Query: 506 --------------------DDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVT 545
D+++ADFG+ + GT ++APE ++
Sbjct: 127 HDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQR--RDSFIGTPYWMAPEVVMC 184
Query: 546 -----GRITAKVDVYSFGMILMDLITGR 568
K DV+S G+ L+++
Sbjct: 185 ETSKDRPYDYKADVWSLGITLIEMAEIE 212
|
| >d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-KIT receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 82.2 bits (202), Expect = 1e-17
Identities = 41/258 (15%), Positives = 68/258 (26%), Gaps = 73/258 (28%)
Query: 418 NNFSEENRLGRGGVGTVYKGELK------DGTEVGVKRMELGSVTEQGIAQFESEITVLT 471
N S LG G G V + V VK ++ + SE+ VL+
Sbjct: 23 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSA-HLTEREALMSELKVLS 81
Query: 472 K-----------------------------GTLGRHLFN-------------WEEEGLEP 489
G L L E+
Sbjct: 82 YLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELA 141
Query: 490 LEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENGKH 525
L+ L+ + VA+G ++ DFGL R + + +
Sbjct: 142 LDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNY 201
Query: 526 SILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLA 585
+ ++APE I T + DV+S+G+ L +L + +
Sbjct: 202 VVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMI 261
Query: 586 TWFQKMHKNHDTFQMAID 603
+M D
Sbjct: 262 KEGFRMLSPEHAPAEMYD 279
|
| >d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: pak1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 81.2 bits (200), Expect = 2e-17
Identities = 36/208 (17%), Positives = 68/208 (32%), Gaps = 55/208 (26%)
Query: 410 IQVLRNATNNFSEENRLGRGGVGTVYKG-ELKDGTEVGVKRMELGSVTEQGIAQFESEIT 468
I + + ++ ++G+G GTVY ++ G EV +++M L + +EI
Sbjct: 12 IVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQ--QPKKELIINEIL 69
Query: 469 VL----------------TKGTL--------GRHLFNWEEEGLEPLEWNTRLNIALDVAR 504
V+ L G L + E + + +
Sbjct: 70 VMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMD--EGQIAAVCRECLQ 127
Query: 505 G----------------------DDMRV--ADFGLVRLVPENGKHSILTKVAGTFGYLAP 540
D V DFG + + + GT ++AP
Sbjct: 128 ALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK--RSTMVGTPYWMAP 185
Query: 541 EYIVTGRITAKVDVYSFGMILMDLITGR 568
E + KVD++S G++ +++I G
Sbjct: 186 EVVTRKAYGPKVDIWSLGIMAIEMIEGE 213
|
| >d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fl cytokine receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 81.4 bits (200), Expect = 2e-17
Identities = 41/229 (17%), Positives = 70/229 (30%), Gaps = 78/229 (34%)
Query: 418 NNFSEENRLGRGGVGTVYKGELKD------GTEVGVKRMELGSVTEQGIAQFESEITVLT 471
N LG G G V +V VK ++ + SE+ ++T
Sbjct: 37 ENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKA-DSSEREALMSELKMMT 95
Query: 472 K-----------------------------GTLGRHLFN------------------WEE 484
+ G L +L + EE
Sbjct: 96 QLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEE 155
Query: 485 EGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVP 520
E L L + L A VA+G +++ DFGL R +
Sbjct: 156 EDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVVKICDFGLARDIM 215
Query: 521 ENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRK 569
+ + + ++APE + G T K DV+S+G++L ++ +
Sbjct: 216 SDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGV 264
|
| >d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: 3-phosphoinositide dependent protein kinase-1 Pdk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 80.4 bits (198), Expect = 3e-17
Identities = 32/209 (15%), Positives = 61/209 (29%), Gaps = 59/209 (28%)
Query: 414 RNATNNFSEENRLGRGGVGTVYKG-ELKDGTEVGVKRMELGSVT-EQGIAQFESEITVLT 471
+ +F LG G TV EL E +K +E + E + E V++
Sbjct: 4 KKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMS 63
Query: 472 K----------------------------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVA 503
+ G L +++ + ++
Sbjct: 64 RLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG-----SFDETCTRFYTAEIV 118
Query: 504 RG----------------------DDMRV--ADFGLVRLVPENGKHSILTKVAGTFGYLA 539
+DM + DFG +++ K + GT Y++
Sbjct: 119 SALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVS 178
Query: 540 PEYIVTGRITAKVDVYSFGMILMDLITGR 568
PE + D+++ G I+ L+ G
Sbjct: 179 PELLTEKSACKSSDLWALGCIIYQLVAGL 207
|
| >d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Mycobacterial protein kinase PknB, catalytic domain species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 78.6 bits (193), Expect = 9e-17
Identities = 38/211 (18%), Positives = 67/211 (31%), Gaps = 64/211 (30%)
Query: 417 TNNFSEENRLGRGGVGTVYKGE-LKDGTEVGVKRMELGSVTEQG-IAQFESEITVLTK-- 472
++ + LG GG+ V+ L+ +V VK + + +F E
Sbjct: 6 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 65
Query: 473 ------------------------------GTLGRHLFNWEEEGLEPLEWNTRLNIALDV 502
TL + P+ + + D
Sbjct: 66 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG-----PMTPKRAIEVIADA 120
Query: 503 ARG------------------------DDMRVADFGLVRLVPENGKHSILTK-VAGTFGY 537
+ + ++V DFG+ R + ++G T V GT Y
Sbjct: 121 CQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQY 180
Query: 538 LAPEYIVTGRITAKVDVYSFGMILMDLITGR 568
L+PE + A+ DVYS G +L +++TG
Sbjct: 181 LSPEQARGDSVDARSDVYSLGCVLYEVLTGE 211
|
| >d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Focal adhesion kinase 1 (fak) species: Human (Homo sapiens) [TaxId: 9606]
Score = 76.7 bits (188), Expect = 4e-16
Identities = 31/215 (14%), Positives = 70/215 (32%), Gaps = 53/215 (24%)
Query: 418 NNFSEENRLGRGGVGTVYKGELKD----GTEVGVKRMELGSVTEQGIAQFESEITVL--- 470
+G G G V++G V +K + + ++ +F E +
Sbjct: 7 ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCT-SDSVREKFLQEALTMRQF 65
Query: 471 ------------TKGTL--------GRHLFNWEEEGLEPLEWNTRLNIALDVARG----- 505
T+ + L ++ + L+ + + A ++
Sbjct: 66 DHPHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE 125
Query: 506 -------------------DDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTG 546
D +++ DFGL R + ++ + +K ++APE I
Sbjct: 126 SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYK-ASKGKLPIKWMAPESINFR 184
Query: 547 RITAKVDVYSFGMILMDLITGRKVVDATHSDPEYI 581
R T+ DV+ FG+ + +++ + + I
Sbjct: 185 RFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVI 219
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} Length = 384 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Score = 78.1 bits (191), Expect = 5e-16
Identities = 37/167 (22%), Positives = 61/167 (36%), Gaps = 31/167 (18%)
Query: 103 ELQDQNRKGTVPPILKKLSSMAVMYLENNQLRGPIP-SLVGSLEFFSAYEANISGTIP-- 159
EL + L L+++ + L NNQ+ P S + L IS P
Sbjct: 223 ELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLA 282
Query: 160 ----------------DFIGTDTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLED 203
D L+YL L NN+ P +S+L+ L+
Sbjct: 283 GLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISP---------VSSLTKLQR 333
Query: 204 LSLGHNKLTGIFPVSSFNNHPKLTTLNLTNNLLQGPTPRFNNSKLTV 250
L +NK++ + SS N + L+ +N + TP N +++T
Sbjct: 334 LFFANNKVSDV---SSLANLTNINWLSAGHNQISDLTPLANLTRITQ 377
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} Length = 384 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Score = 64.6 bits (156), Expect = 9e-12
Identities = 34/165 (20%), Positives = 64/165 (38%), Gaps = 18/165 (10%)
Query: 71 SFVIPKRLKWSDPDPCQWSHVI-CSDDGQVTNIELQDQNRKGTVPPILKKLSSMAVMYLE 129
+ L D Q S++ S ++T ++L + P+ + + E
Sbjct: 236 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN-ISPLAGLTALTNLELNE 294
Query: 130 NNQLRGPIPSLVGSLEFFSAYEANISGTIPDFIGTDTFPQLSYLDLGNNNLQGTIPSSFG 189
N S + +L + + Y NIS P + +L L NN + SS
Sbjct: 295 NQLEDISPISNLKNLTYLTLYFNNISDISP----VSSLTKLQRLFFANNKVSD--VSSLA 348
Query: 190 MPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNN 234
NL+ + LS GHN+++ + P+++ ++T L L +
Sbjct: 349 -------NLTNINWLSAGHNQISDLTPLANL---TRITQLGLNDQ 383
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} Length = 384 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Score = 49.6 bits (117), Expect = 6e-07
Identities = 20/107 (18%), Positives = 33/107 (30%), Gaps = 16/107 (14%)
Query: 154 ISGTIPDFIGTDTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTG 213
I+ D + LG N+ T+ ++L + L +
Sbjct: 12 INQIFTD----TALAEKMKTVLGKTNVTDTVS---------QTDLDQVTTLQADRLGIKS 58
Query: 214 IFPVSSFNNHPKLTTLNLTNNLLQGPTPRFNNSKLTVDMRTGSNCFC 260
I LT +N +NN L TP N +KL + +
Sbjct: 59 I---DGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIAD 102
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} Length = 384 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Score = 48.5 bits (114), Expect = 1e-06
Identities = 25/108 (23%), Positives = 40/108 (37%), Gaps = 16/108 (14%)
Query: 153 NISGTIPDFIGTDTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLT 212
IS P I L L L N L+ +++L+ L DL L +N+++
Sbjct: 208 QISDITPLGI----LTNLDELSLNGNQLKD---------IGTLASLTNLTDLDLANNQIS 254
Query: 213 GIFPVSSFNNHPKLTTLNLTNNLLQGPTPRFNNSKLTVDMRTGSNCFC 260
+ P + KLT L L N + +P + LT +
Sbjct: 255 NLAP---LSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLED 299
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} Length = 384 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Score = 42.7 bits (99), Expect = 9e-05
Identities = 21/79 (26%), Positives = 31/79 (39%), Gaps = 12/79 (15%)
Query: 172 YLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNL 231
L NN + P + L++LSL N+L I + + LT L+L
Sbjct: 201 SLIATNNQISDITPLGIL---------TNLDELSLNGNQLKDI---GTLASLTNLTDLDL 248
Query: 232 TNNLLQGPTPRFNNSKLTV 250
NN + P +KLT
Sbjct: 249 ANNQISNLAPLSGLTKLTE 267
|
| >d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fibroblast growth factor receptor 1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 76.4 bits (187), Expect = 7e-16
Identities = 45/224 (20%), Positives = 72/224 (32%), Gaps = 73/224 (32%)
Query: 418 NNFSEENRLGRGGVGTVYKGELK--------DGTEVGVKRMELGSVTEQGIAQFESEITV 469
+ LG G G V E T+V VK ++ TE+ ++ SE+ +
Sbjct: 13 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKS-DATEKDLSDLISEMEM 71
Query: 470 LTK-----------------------------GTLGRHLFNWEEEGLE-----------P 489
+ G L +L GLE
Sbjct: 72 MKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQ 131
Query: 490 LEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENGKH 525
L ++ A VARG + M++ADFGL R + +
Sbjct: 132 LSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYY 191
Query: 526 SILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRK 569
T ++APE + T + DV+SFG++L ++ T
Sbjct: 192 KKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGG 235
|
| >d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Vascular endothelial growth factor receptor 2 (kdr) species: Human (Homo sapiens) [TaxId: 9606]
Score = 76.1 bits (186), Expect = 8e-16
Identities = 45/279 (16%), Positives = 82/279 (29%), Gaps = 72/279 (25%)
Query: 418 NNFSEENRLGRGGVGTVYKGELK------DGTEVGVKRMELGSVTEQGIAQFESEITVLT 471
+ LGRG G V + + V VK ++ G+ T SE+ +L
Sbjct: 13 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA-THSEHRALMSELKILI 71
Query: 472 K------------------------------GTLGRHLFN-----------WEEEGLEPL 490
G L +L + E+ + L
Sbjct: 72 HIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFL 131
Query: 491 EWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENGKHS 526
+ + VA+G + +++ DFGL R + ++ +
Sbjct: 132 TLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYV 191
Query: 527 ILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLAT 586
++APE I T + DV+SFG++L ++ + E
Sbjct: 192 RKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLK 251
Query: 587 WFQKMHKNHDTFQMAIDKTIQLDEENLANVSTVAELGDH 625
+M T + + T +EL +H
Sbjct: 252 EGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 290
|
| >d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: (Plasmodium falciparum) [TaxId: 5833]
Score = 75.7 bits (185), Expect = 1e-15
Identities = 31/198 (15%), Positives = 64/198 (32%), Gaps = 48/198 (24%)
Query: 418 NNFSEENRLGRGGVGTVYKGELKDGTEVGVKRMELGSVTEQGIAQFESEITVLTK----- 472
+ ++G G G VYK + G +K++ L E + EI++L +
Sbjct: 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSN 61
Query: 473 ------------------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG--------- 505
L + L + LE T + L + G
Sbjct: 62 IVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRV 121
Query: 506 ---------------DDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITA 550
++++ADFGL R + ++ + + + + +
Sbjct: 122 LHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYT-HEIVTLWYRAPDVLMGSKKYST 180
Query: 551 KVDVYSFGMILMDLITGR 568
+D++S G I +++ G
Sbjct: 181 TIDIWSVGCIFAEMVNGT 198
|
| >d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 75.3 bits (184), Expect = 2e-15
Identities = 38/278 (13%), Positives = 76/278 (27%), Gaps = 69/278 (24%)
Query: 418 NNFSEENRLGRGGVGTVYKGE-LKDGTEVGVKRMELGSVTEQGIAQFESEITVLTKGT-- 474
N + ++G G G +Y G + G EV +K + + Q E +
Sbjct: 7 NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECV----KTKHPQLHIESKIYKMMQGG 62
Query: 475 ----------------------LGRHLFNWEEEGLEPLEWNTRLNIALDVARG------- 505
LG L + T L +A +
Sbjct: 63 VGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSK 122
Query: 506 --------------------DDMRVADFGLVRLVPENGKHSI-----LTKVAGTFGYLAP 540
+ + + DFGL + + H + GT Y +
Sbjct: 123 NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASI 182
Query: 541 EYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQKMHKNHDT--- 597
+ + + D+ S G +LM G + + + +KM +
Sbjct: 183 NTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCK 242
Query: 598 -----FQMAIDKTIQLDEENLANVSTVAELGDHCCANE 630
F ++ L ++ + S + +L + +
Sbjct: 243 GYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQ 280
|
| >d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: Caenorhabditis elegans, pjk4 [TaxId: 6239]
Score = 75.9 bits (186), Expect = 2e-15
Identities = 31/202 (15%), Positives = 59/202 (29%), Gaps = 56/202 (27%)
Query: 418 NNFSEENRLGRGGVGTVYKG-ELKDGTEVGVKRMELGSVTEQGIAQFESEITVL------ 470
+++ LG G G V++ E G K + E EI +
Sbjct: 26 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPH--ESDKETVRKEIQTMSVLRHP 83
Query: 471 ----------TKGTL--------GRHLFNWEEEGLEPLEWNTRLNIALDVARG------- 505
+ G LF + + + + V +G
Sbjct: 84 TLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHEN 143
Query: 506 -------------------DDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTG 546
+++++ DFGL + + T GT + APE
Sbjct: 144 NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTT---GTAEFAAPEVAEGK 200
Query: 547 RITAKVDVYSFGMILMDLITGR 568
+ D++S G++ L++G
Sbjct: 201 PVGYYTDMWSVGVLSYILLSGL 222
|
| >d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase C, theta type species: Human (Homo sapiens) [TaxId: 9606]
Score = 74.4 bits (182), Expect = 5e-15
Identities = 35/201 (17%), Positives = 67/201 (33%), Gaps = 52/201 (25%)
Query: 418 NNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSV-TEQGIAQFESEITVLTK--- 472
+F LG+G G V+ E K +K ++ V + + E VL+
Sbjct: 2 EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWE 61
Query: 473 ----------GTLGRHLFNWEE-----------EGLEPLEWNTRLNIALDVARG------ 505
+LF E + + + A ++ G
Sbjct: 62 HPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHS 121
Query: 506 ------------------DDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGR 547
+++ADFG+ + + GT Y+APE ++ +
Sbjct: 122 KGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKT--NTFCGTPDYIAPEILLGQK 179
Query: 548 ITAKVDVYSFGMILMDLITGR 568
VD +SFG++L +++ G+
Sbjct: 180 YNHSVDWWSFGVLLYEMLIGQ 200
|
| >d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Calmodulin-dependent protein kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 73.9 bits (181), Expect = 6e-15
Identities = 38/205 (18%), Positives = 70/205 (34%), Gaps = 55/205 (26%)
Query: 415 NATNNFSEENRLGRGGVGTVYKGE-LKDGTEVGVKRMELGSVTEQGIAQFESEITVLTK- 472
+ + + + LG G V E + V +K + ++ + E+EI VL K
Sbjct: 6 DIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGK-EGSMENEIAVLHKI 64
Query: 473 ---------------------------GTLGRHL-----FNWEE---------EGLEPLE 491
G L + + + + ++ L
Sbjct: 65 KHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLH 124
Query: 492 WNTRL-------NIALDVARGD-DMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYI 543
+ N+ D + ++DFGL ++ S+L+ GT GY+APE +
Sbjct: 125 DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPG---SVLSTACGTPGYVAPEVL 181
Query: 544 VTGRITAKVDVYSFGMILMDLITGR 568
+ VD +S G+I L+ G
Sbjct: 182 AQKPYSKAVDCWSIGVIAYILLCGY 206
|
| >d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Score = 73.3 bits (179), Expect = 7e-15
Identities = 29/222 (13%), Positives = 66/222 (29%), Gaps = 57/222 (25%)
Query: 418 NNFSEENRLGRGGVGTVYKGE-LKDGTEVGVKRMELGSVTEQGIAQFESEITVLTKGTLG 476
++ R+G G G +++G L + +V +K S Q ++ +L T
Sbjct: 5 VHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDAPQLRDEYR-TYKLLAGCTGI 63
Query: 477 RHLFNWEEEGLE---------------------PLEWNTRLNIALDVARG---------- 505
+++ + +EGL T A +
Sbjct: 64 PNVYYFGQEGLHNVLVIDLLGPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSLV 123
Query: 506 -------------------DDMRVADFGLVRLVPENGKHSIL-----TKVAGTFGYLAPE 541
+ + V DFG+V+ + + ++GT Y++
Sbjct: 124 YRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSIN 183
Query: 542 YIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIH 583
+ + + D+ + G + M + G + +
Sbjct: 184 THLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKY 225
|
| >d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]
Score = 72.0 bits (176), Expect = 4e-14
Identities = 38/266 (14%), Positives = 78/266 (29%), Gaps = 75/266 (28%)
Query: 418 NNFSEENRLGRGGVGTVYKG-ELKDGTEVGVKRMELGSVTEQGIAQFESEITVL------ 470
+ + LG G G V++ E G K + ++ ++EI+++
Sbjct: 29 DYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDK--YTVKNEISIMNQLHHP 86
Query: 471 ----------TKGTL--------GRHLFNWEEEGLEPLEWNTRLNIALDVARG------- 505
K + G LF+ + +N G
Sbjct: 87 KLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEH 146
Query: 506 -------------------DDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTG 546
+++ DFGL + + I+ T + APE +
Sbjct: 147 SIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPD---EIVKVTTATAEFAAPEIVDRE 203
Query: 547 RITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQKMHKNHDTFQMAIDKTI 606
+ D+++ G++ L++G + +T Q
Sbjct: 204 PVGFYTDMWAIGVLGYVLLSGLSPFAGED------------------DLETLQNVKRCDW 245
Query: 607 QLDEENLANVSTVA-ELGDHCCANEP 631
+ DE+ ++VS A + + EP
Sbjct: 246 EFDEDAFSSVSPEAKDFIKNLLQKEP 271
|
| >d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK6 species: Human (Homo sapiens) [TaxId: 9606]
Score = 71.4 bits (174), Expect = 4e-14
Identities = 36/211 (17%), Positives = 61/211 (28%), Gaps = 61/211 (28%)
Query: 416 ATNNFSEENRLGRGGVGTVYKGELK--DGTEVGVKRMELGSVTEQGIAQFESEITVLTKG 473
A + +G G G V+K G V +KR+ + + E E+ VL
Sbjct: 5 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHL 64
Query: 474 TLGRH--------------------------------LFNWEEEGLEPLEWNTRLNIALD 501
H ++ + T ++
Sbjct: 65 ETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQ 124
Query: 502 VARG------------------------DDMRVADFGLVRLVPENGKHSILTKVAGTFGY 537
+ RG +++ADFGL R+ T V T Y
Sbjct: 125 LLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMAL---TSVVVTLWY 181
Query: 538 LAPEYIVTGRITAKVDVYSFGMILMDLITGR 568
APE ++ VD++S G I ++ +
Sbjct: 182 RAPEVLLQSSYATPVDLWSVGCIFAEMFRRK 212
|
| >d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 70.7 bits (172), Expect = 6e-14
Identities = 41/200 (20%), Positives = 68/200 (34%), Gaps = 52/200 (26%)
Query: 419 NFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK----- 472
NF + ++G G G VYK K G V +K++ L + TE + EI++L +
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 473 -------GTLGRHLFNWEE------------EGLEPLEWNTRLNIALDVARG-------- 505
L+ E L + + + +G
Sbjct: 63 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 122
Query: 506 ----------------DDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPE-YIVTGRI 548
+++ADFGL R + T T Y APE +
Sbjct: 123 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVTLWYRAPEILLGCKYY 180
Query: 549 TAKVDVYSFGMILMDLITGR 568
+ VD++S G I +++T R
Sbjct: 181 STAVDIWSLGCIFAEMVTRR 200
|
| >d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: G-protein coupled receptor kinase 2 species: Cow (Bos taurus) [TaxId: 9913]
Score = 70.1 bits (171), Expect = 1e-13
Identities = 41/239 (17%), Positives = 71/239 (29%), Gaps = 57/239 (23%)
Query: 418 NNFSEENRLGRGGVGTVYKGELKD-GTEVGVKRMELGSVT-EQGIAQFESEITVLTKGTL 475
N+FS +GRGG G VY D G +K ++ + +QG +E +L+ +
Sbjct: 4 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST 63
Query: 476 GRH-----LFNWEEEG------LEPLE---------------WNTRLNIALDVARG---- 505
G + L+ + A ++ G
Sbjct: 64 GDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHM 123
Query: 506 --------------------DDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVT 545
+R++D GL + GT GY+APE +
Sbjct: 124 HNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSK----KKPHASVGTHGYMAPEVLQK 179
Query: 546 GR-ITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQKMHKNHDTFQMAID 603
G + D +S G +L L+ G + ++ I T +
Sbjct: 180 GVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRS 238
|
| >d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Death-associated protein kinase, Dap species: Human (Homo sapiens) [TaxId: 9606]
Score = 69.4 bits (169), Expect = 1e-13
Identities = 41/275 (14%), Positives = 77/275 (28%), Gaps = 80/275 (29%)
Query: 415 NATNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQ----GIAQFESEITV 469
N + + LG G V K K G + K ++ E E+++
Sbjct: 7 NVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSI 66
Query: 470 L----------------TKGTL--------GRHLFNWEEEGLEPLEWNTRLNIALDVARG 505
L K + G LF++ E E L + G
Sbjct: 67 LKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK-ESLTEEEATEFLKQILNG 125
Query: 506 ----------------------------DDMRVADFGLVRLVPENGKHSILTKVAGTFGY 537
+++ DFGL + + + GT +
Sbjct: 126 VYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF---KNIFGTPEF 182
Query: 538 LAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQKMHKNHDT 597
+APE + + + D++S G+I L++G +T
Sbjct: 183 VAPEIVNYEPLGLEADMWSIGVITYILLSGA------------------SPFLGDTKQET 224
Query: 598 FQMAIDKTIQLDEENLANVSTVA-ELGDHCCANEP 631
+ ++E +N S +A + +P
Sbjct: 225 LANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDP 259
|
| >d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 69.0 bits (168), Expect = 3e-13
Identities = 40/261 (15%), Positives = 84/261 (32%), Gaps = 60/261 (22%)
Query: 418 NNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTE-QGIAQFESEITVLTK--- 472
+F LG G G V+ + +G +K ++ V + + E +L+
Sbjct: 4 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTH 63
Query: 473 ---------------------GTLGRHLFNWEEEGLEPLEWNTRL--------------- 496
G LF+ + +
Sbjct: 64 PFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSK 123
Query: 497 ----------NIALDVARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTG 546
NI LD + +++ DFG + VP+ + GT Y+APE + T
Sbjct: 124 DIIYRDLKPENILLD--KNGHIKITDFGFAKYVPDVT-----YTLCGTPDYIAPEVVSTK 176
Query: 547 RITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQKMHKNHDTFQMAIDKTI 606
+D +SFG+++ +++ G +++ Y L + ++ + + + I
Sbjct: 177 PYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFPPFFNEDVKDLLSRLI 236
Query: 607 QLDEEN--LANVSTVAELGDH 625
D + ++ +H
Sbjct: 237 TRDLSQRLGNLQNGTEDVKNH 257
|
| >d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 9, CDK9 species: Human (Homo sapiens) [TaxId: 9606]
Score = 68.4 bits (166), Expect = 4e-13
Identities = 38/210 (18%), Positives = 69/210 (32%), Gaps = 59/210 (28%)
Query: 418 NNFSEENRLGRGGVGTVYKGE-LKDGTEVGVKRMELGSVTEQGIAQFESEITVLTK---- 472
+ + + ++G+G G V+K K G +V +K++ + + E EI +L
Sbjct: 10 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHE 69
Query: 473 --------------------------------GTLGRHL-----FNWEE------EGLEP 489
G F E L
Sbjct: 70 NVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNG 129
Query: 490 LEWNTRLNIA--------LDVARGDDMRVADFGLVRLV--PENGKHSILTKVAGTFGYLA 539
L + R I + + R +++ADFGL R +N + + T T Y
Sbjct: 130 LYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRP 189
Query: 540 PEYIVTGR-ITAKVDVYSFGMILMDLITGR 568
PE ++ R +D++ G I+ ++ T
Sbjct: 190 PELLLGERDYGPPIDLWGAGCIMAEMWTRS 219
|
| >d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Proto-oncogene serine/threonine-protein kinase Pim-1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 67.4 bits (164), Expect = 5e-13
Identities = 38/208 (18%), Positives = 66/208 (31%), Gaps = 61/208 (29%)
Query: 418 NNFSEENRLGRGGVGTVYKG-ELKDGTEVGVKRMELGSVTEQG----IAQFESEITVLTK 472
+ + LG GG G+VY G + D V +K +E +++ G + E+ +L K
Sbjct: 4 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 63
Query: 473 ---------------GTLGRHLFNWEEEGLE-----------PLEWNTRLNIALDVARG- 505
+ E L+ + V
Sbjct: 64 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAV 123
Query: 506 ------------------------DDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPE 541
++++ DFG L+ K ++ T GT Y PE
Sbjct: 124 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPE 179
Query: 542 YIVTGR-ITAKVDVYSFGMILMDLITGR 568
+I R V+S G++L D++ G
Sbjct: 180 WIRYHRYHGRSAAVWSLGILLYDMVCGD 207
|
| >d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase Erk2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 67.6 bits (164), Expect = 1e-12
Identities = 35/209 (16%), Positives = 71/209 (33%), Gaps = 58/209 (27%)
Query: 415 NATNNFSEENRLGRGGVGTVYKG-ELKDGTEVGVKRMELGSVTEQGIAQFESEITVLTK- 472
+ ++ + +G G G V + + V +K++ + + EI +L +
Sbjct: 5 DVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFE-HQTYCQRTLREIKILLRF 63
Query: 473 ---------------------------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG 505
+G L+ + L + + RG
Sbjct: 64 RHENIIGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQ--HLSNDHICYFLYQILRG 121
Query: 506 ------------------------DDMRVADFGLVRLV-PENGKHSILTKVAGTFGYLAP 540
D+++ DFGL R+ P++ LT+ T Y AP
Sbjct: 122 LKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 181
Query: 541 EYIVTGRI-TAKVDVYSFGMILMDLITGR 568
E ++ + T +D++S G IL ++++ R
Sbjct: 182 EIMLNSKGYTKSIDIWSVGCILAEMLSNR 210
|
| >d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: gamma-subunit of glycogen phosphorylase kinase (Phk) species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 66.6 bits (162), Expect = 1e-12
Identities = 38/214 (17%), Positives = 63/214 (29%), Gaps = 69/214 (32%)
Query: 419 NFSEENRLGRGGVGTVYKGE-LKDGTEVGVKRMELGSVT-------EQGIAQFESEITVL 470
N+ + LGRG V + E VK +++ ++ E+ +L
Sbjct: 4 NYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDIL 63
Query: 471 TKGTLGRH-----LFNWEEEGLE---------------------PLEWNTRLNIALDVAR 504
K + H L + E L I +
Sbjct: 64 RK--VSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLE 121
Query: 505 G------------------------DDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAP 540
++++ DFG + K L +V GT YLAP
Sbjct: 122 VICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEK---LREVCGTPSYLAP 178
Query: 541 EYIVTGR------ITAKVDVYSFGMILMDLITGR 568
E I +VD++S G+I+ L+ G
Sbjct: 179 EIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGS 212
|
| >d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Titin, kinase domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 66.6 bits (162), Expect = 2e-12
Identities = 28/195 (14%), Positives = 55/195 (28%), Gaps = 57/195 (29%)
Query: 425 RLGRGGVGTVYKG-ELKDGTEVGVKRMELGSVTEQGIAQFESEITVL------------- 470
LGRG G V++ E K +++ + + EI++L
Sbjct: 12 DLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQV---LVKKEISILNIARHRNILHLHE 68
Query: 471 ---TKGTL--------GRHLFNWEEEGLEPLEWNTRLNIALDVARG-------------- 505
+ L G +F L ++ V
Sbjct: 69 SFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIGHFDI 128
Query: 506 ------------DDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVD 553
+++ +FG R + + Y APE ++ D
Sbjct: 129 RPENIIYQTRRSSTIKIIEFGQARQLKPGDNF---RLLFTAPEYYAPEVHQHDVVSTATD 185
Query: 554 VYSFGMILMDLITGR 568
++S G ++ L++G
Sbjct: 186 MWSLGTLVYVLLSGI 200
|
| >d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Pkb kinase (Akt-2) species: Human (Homo sapiens) [TaxId: 9606]
Score = 66.3 bits (161), Expect = 2e-12
Identities = 41/260 (15%), Positives = 76/260 (29%), Gaps = 55/260 (21%)
Query: 418 NNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVT-EQGIAQFESEITVLTK--- 472
N+F LG+G G V K G +K + + + +A +E VL
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 473 ---------------------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARGDDM--- 508
G LF E R ++ +
Sbjct: 65 PFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERAR-FYGAEIVSALEYLHS 123
Query: 509 ---------------------RVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGR 547
++ DFGL + +G + GT YLAPE +
Sbjct: 124 RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT--MKTFCGTPEYLAPEVLEDND 181
Query: 548 ITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQKMHKNHDTFQMAIDKTIQ 607
VD + G+++ +++ GR + + + L + + + ++
Sbjct: 182 YGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKSLLAGLLK 241
Query: 608 LDEEN--LANVSTVAELGDH 625
D + S E+ +H
Sbjct: 242 KDPKQRLGGGPSDAKEVMEH 261
|
| >d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 7, CDK7 species: Human (Homo sapiens) [TaxId: 9606]
Score = 63.3 bits (153), Expect = 2e-11
Identities = 39/198 (19%), Positives = 62/198 (31%), Gaps = 56/198 (28%)
Query: 424 NRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTE---QGIAQFESEITVL--------- 470
+ LG G TVYK K V +K+++LG +E EI +L
Sbjct: 4 DFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNII 63
Query: 471 -------TKGTL--------GRHLFNWEEEGLEPLEWNTRLNIALDVARG---------- 505
K + ++ L L + L +G
Sbjct: 64 GLLDAFGHKSNISLVFDFMETDLEVIIKDNSL-VLTPSHIKAYMLMTLQGLEYLHQHWIL 122
Query: 506 --------------DDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGR-ITA 550
+++ADFGL + + T T Y APE + R
Sbjct: 123 HRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAY--THQVVTRWYRAPELLFGARMYGV 180
Query: 551 KVDVYSFGMILMDLITGR 568
VD+++ G IL +L+
Sbjct: 181 GVDMWAVGCILAELLLRV 198
|
| >d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38-gamma species: Human (Homo sapiens) [TaxId: 9606]
Score = 63.7 bits (154), Expect = 2e-11
Identities = 38/204 (18%), Positives = 70/204 (34%), Gaps = 58/204 (28%)
Query: 418 NNFSEENRLGRGGVGTVYKG-ELKDGTEVGVKRMELGSVTEQGIAQFESEITVLTK---- 472
+ + +G G G V + + G +V +K++ +E + E+ +L
Sbjct: 18 AVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHE 77
Query: 473 --------GTLGRHLFNWEEEGL---------------EPLEWNTRLNIALDVARG---- 505
T L ++ + L E L + + + +G
Sbjct: 78 NVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYI 137
Query: 506 --------------------DDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIV- 544
++++ DFGL R +T T Y APE I+
Sbjct: 138 HAAGIIHRDLKPGNLAVNEDCELKILDFGLARQADSE-----MTGYVVTRWYRAPEVILN 192
Query: 545 TGRITAKVDVYSFGMILMDLITGR 568
R T VD++S G I+ ++ITG+
Sbjct: 193 WMRYTQTVDIWSVGCIMAEMITGK 216
|
| >d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Glycogen synthase kinase-3 beta (Gsk3b) species: Human (Homo sapiens) [TaxId: 9606]
Score = 62.5 bits (151), Expect = 4e-11
Identities = 34/284 (11%), Positives = 76/284 (26%), Gaps = 74/284 (26%)
Query: 414 RNATNNFSEENRLGRGGVGTVYKGELKD-GTEVGVKRMELGSVTEQGIAQFESEITVLTK 472
R ++++ +G G G VY+ +L D G V +K++ Q E+ ++ K
Sbjct: 16 RPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL------QDKRFKNRELQIMRK 69
Query: 473 --------------------------------GTLGRHLFNWEEEGLEPLEWNTRLNIAL 500
+ + L
Sbjct: 70 LDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY 129
Query: 501 DVARG-------------------------DDMRVADFGLVRLVPENGKHSILTKVAGTF 535
+ R +++ DFG + + + + + +
Sbjct: 130 QLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV--SYICSRY 187
Query: 536 GYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLAT-------WF 588
T+ +DV+S G +L +L+ G+ + + + +
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI 247
Query: 589 QKMHKNHDTFQMAIDKTIQLDEENLANVSTVA-ELGDHCCANEP 631
++M+ N+ F+ K + A L P
Sbjct: 248 REMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTP 291
|
| >d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK5 species: Human (Homo sapiens) [TaxId: 9606]
Score = 61.5 bits (148), Expect = 5e-11
Identities = 28/212 (13%), Positives = 65/212 (30%), Gaps = 49/212 (23%)
Query: 418 NNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK---- 472
+ + ++G G GTV+K + + V +KR+ L E + EI +L +
Sbjct: 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHK 61
Query: 473 -------------------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG-------- 505
+ L + + L+ + + +G
Sbjct: 62 NIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRN 121
Query: 506 ----------------DDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRIT 549
++++A+FGL R + +V + +
Sbjct: 122 VLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYS-AEVVTLWYRPPDVLFGAKLYS 180
Query: 550 AKVDVYSFGMILMDLITGRKVVDATHSDPEYI 581
+D++S G I +L + + + + +
Sbjct: 181 TSIDMWSAGCIFAELANAGRPLFPGNDVDDQL 212
|
| >d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-jun N-terminal kinase (jnk3s) species: Human (Homo sapiens) [TaxId: 9606]
Score = 60.7 bits (146), Expect = 2e-10
Identities = 33/221 (14%), Positives = 65/221 (29%), Gaps = 60/221 (27%)
Query: 399 HSVDFGDMAIPIQVLRNATNNFSEENRLGRGGVGTVYKG-ELKDGTEVGVKRMELGSVTE 457
+SV+ GD + + +G G G V + V +K++ +
Sbjct: 4 YSVEVGDSTFTV------LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQ 57
Query: 458 QGIAQFESEITVLTK----------------------------------GTLGRHLFNWE 483
+ E+ ++ +
Sbjct: 58 THAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELD 117
Query: 484 EE-----------GLEPLEWNTRLNIAL-----DVARGDDMRVADFGLVRLVPENGKHSI 527
E G++ L ++ L V +++ DFGL R +
Sbjct: 118 HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFM--- 174
Query: 528 LTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGR 568
+T T Y APE I+ VD++S G I+ +++ +
Sbjct: 175 MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 215
|
| >d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase activated protein kinase 2, mapkap2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 59.0 bits (142), Expect = 6e-10
Identities = 27/203 (13%), Positives = 55/203 (27%), Gaps = 72/203 (35%)
Query: 426 LGRGGVGTVYKGE-LKDGTEVGVKRMELGSVTEQGIAQFESEITVLTKGTLGRH------ 478
LG G G V + + + +K + Q + E+ + + +
Sbjct: 20 LGLGINGKVLQIFNKRTQEKFALKML-------QDCPKARREVELHWR--ASQCPHIVRI 70
Query: 479 -------------------------LFNW-EEEGLEPLEWNTRLNIALDVARG------- 505
LF+ ++ G + I +
Sbjct: 71 VDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI 130
Query: 506 --------------------DDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVT 545
+++ DFG + + T T Y+APE +
Sbjct: 131 NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSL---TTPCYTPYYVAPEVLGP 187
Query: 546 GRITAKVDVYSFGMILMDLITGR 568
+ D++S G+I+ L+ G
Sbjct: 188 EKYDKSCDMWSLGVIMYILLCGY 210
|
| >d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 313 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Polygalacturonase inhibiting protein PGIP domain: Polygalacturonase inhibiting protein PGIP species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Score = 57.1 bits (136), Expect = 2e-09
Identities = 21/74 (28%), Positives = 27/74 (36%), Gaps = 10/74 (13%)
Query: 167 FPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKL 226
L+ LDL NN + GT+P L L L++ N L G P N +
Sbjct: 243 SKNLNGLDLRNNRIYGTLPQGLT-------QLKFLHSLNVSFNNLCGEIP--QGGNLQRF 293
Query: 227 TTLNLTNN-LLQGP 239
NN L G
Sbjct: 294 DVSAYANNKCLCGS 307
|
| >d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 313 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Polygalacturonase inhibiting protein PGIP domain: Polygalacturonase inhibiting protein PGIP species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Score = 55.9 bits (133), Expect = 4e-09
Identities = 17/67 (25%), Positives = 26/67 (38%), Gaps = 10/67 (14%)
Query: 153 NISGTIPDFIGTDTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLT 212
I GT+P + L L++ NNL G IP NL + + +NK
Sbjct: 255 RIYGTLPQGLTQ--LKFLHSLNVSFNNLCGEIPQ--------GGNLQRFDVSAYANNKCL 304
Query: 213 GIFPVSS 219
P+ +
Sbjct: 305 CGSPLPA 311
|
| >d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 313 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Polygalacturonase inhibiting protein PGIP domain: Polygalacturonase inhibiting protein PGIP species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Score = 48.2 bits (113), Expect = 1e-06
Identities = 15/56 (26%), Positives = 24/56 (42%), Gaps = 2/56 (3%)
Query: 206 LGHNKLTGIFPVSSFNNHPKLTTLNLTNNLLQGPTPRFNN-SKLTVDMRTGSNCFC 260
L +N++ G P L +LN++ N L G P+ N + V + C C
Sbjct: 251 LRNNRIYGTLP-QGLTQLKFLHSLNVSFNNLCGEIPQGGNLQRFDVSAYANNKCLC 305
|
| >d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 313 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Polygalacturonase inhibiting protein PGIP domain: Polygalacturonase inhibiting protein PGIP species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Score = 48.2 bits (113), Expect = 2e-06
Identities = 19/81 (23%), Positives = 29/81 (35%), Gaps = 9/81 (11%)
Query: 61 DAAVMQDLKASFVIPKRLK-W---SDPDPCQWSHVICSDDGQ---VTNIELQDQNRKG-- 111
D + +K P L W +D W V+C D Q V N++L N
Sbjct: 7 DKQALLQIKKDLGNPTTLSSWLPTTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPY 66
Query: 112 TVPPILKKLSSMAVMYLENNQ 132
+P L L + +Y+
Sbjct: 67 PIPSSLANLPYLNFLYIGGIN 87
|
| >d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 313 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Polygalacturonase inhibiting protein PGIP domain: Polygalacturonase inhibiting protein PGIP species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Score = 43.2 bits (100), Expect = 5e-05
Identities = 14/108 (12%), Positives = 27/108 (25%), Gaps = 24/108 (22%)
Query: 78 LKWSDPDPCQWSHVICSDDGQVTNIELQDQNRKGTVPPILKKLSSMAVMYLENNQLRGPI 137
+ + + ++L++ GT+P L +L + + + N L G I
Sbjct: 225 KIHLAKNSLAFDLGKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEI 284
Query: 138 PSLVGSLEFFSAYEANISGTIPDFIGTDTFPQLSYLDLGNNNLQGTIP 185
P + NN P
Sbjct: 285 PQG------------------------GNLQRFDVSAYANNKCLCGSP 308
|
| >d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 313 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Polygalacturonase inhibiting protein PGIP domain: Polygalacturonase inhibiting protein PGIP species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Score = 41.3 bits (95), Expect = 2e-04
Identities = 13/48 (27%), Positives = 19/48 (39%), Gaps = 3/48 (6%)
Query: 268 CDSR-VNILLSIAESMGYPEVLAESRKGNDPCPTYKYWKGISCDIGGN 314
C+ + LL I + +G P L+ D C W G+ CD
Sbjct: 3 CNPQDKQALLQIKKDLGNPTTLSSWLPTTDCCNR--TWLGVLCDTDTQ 48
|
| >d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Mouse (Mus musculus) [TaxId: 10090]
Score = 56.7 bits (136), Expect = 3e-09
Identities = 36/259 (13%), Positives = 73/259 (28%), Gaps = 56/259 (21%)
Query: 418 NNFSEENRLGRGGVGTVYKGE-LKDGTEVGVKRMELGSVT-EQGIAQFESEITVL----- 470
+ F LG G G V + + G +K ++ V + I +E +L
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 471 -----------TKGTLGRHLFNWEEEGL-------EPLEWNTRLNIALDVARG------- 505
L + + A +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 506 -----------------DDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRI 548
++V DFG + + GT LAPE I++
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFAKR-----VKGRTWTLCGTPEALAPEIILSKGY 215
Query: 549 TAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQKMHKNHDTFQMAIDKTIQL 608
VD ++ G+++ ++ G A Y ++ + + + +Q+
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQV 275
Query: 609 D-EENLANVS-TVAELGDH 625
D + N+ V ++ +H
Sbjct: 276 DLTKRFGNLKNGVNDIKNH 294
|
| >d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 124 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain domain: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 52.4 bits (125), Expect = 6e-09
Identities = 25/120 (20%), Positives = 43/120 (35%), Gaps = 10/120 (8%)
Query: 112 TVPPILKKLSSMAVMYLENNQLRGPIPSLVGSLEFFSAYEANISGTIPDFIGTDTFPQLS 171
TV L++L + + L +N+LR P+L + + G P+L
Sbjct: 11 TVLCHLEQLLLVTHLDLSHNRLRALPPALAALRCLEVLQ--ASDNALENVDGVANLPRLQ 68
Query: 172 YLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGI--FPVSSFNNHPKLTTL 229
L L NN LQ + + + L L+L N L P ++++
Sbjct: 69 ELLLCNNRLQQSAAIQP------LVSCPRLVLLNLQGNSLCQEEGIQERLAEMLPSVSSI 122
|
| >d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 124 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain domain: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 48.2 bits (114), Expect = 1e-07
Identities = 19/88 (21%), Positives = 36/88 (40%), Gaps = 14/88 (15%)
Query: 165 DTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLST--------------LEDLSLGHNK 210
+ +++LDL +N L+ P+ + ++ S L++L L +N+
Sbjct: 17 EQLLLVTHLDLSHNRLRALPPALAALRCLEVLQASDNALENVDGVANLPRLQELLLCNNR 76
Query: 211 LTGIFPVSSFNNHPKLTTLNLTNNLLQG 238
L + + P+L LNL N L
Sbjct: 77 LQQSAAIQPLVSCPRLVLLNLQGNSLCQ 104
|
| >d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 124 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain domain: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 38.9 bits (90), Expect = 3e-04
Identities = 15/74 (20%), Positives = 25/74 (33%), Gaps = 3/74 (4%)
Query: 204 LSLGHNKLTGIFPVSSFNNHPKLTTLNLTNNLLQGPTPRFNNSKLTVDMRTGSNCFCLDD 263
L L H LT + +T L+L++N L+ P + ++ N D
Sbjct: 3 LHLAHKDLTVL---CHLEQLLLVTHLDLSHNRLRALPPALAALRCLEVLQASDNALENVD 59
Query: 264 PGLACDSRVNILLS 277
+LL
Sbjct: 60 GVANLPRLQELLLC 73
|
| >d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38 species: Human (Homo sapiens) [TaxId: 9606]
Score = 54.1 bits (129), Expect = 2e-08
Identities = 34/200 (17%), Positives = 59/200 (29%), Gaps = 48/200 (24%)
Query: 417 TNNFSEENRLGRGGVGTVYKGE-LKDGTEVGVKRMELGSVTEQGIAQFESEITVLTK--- 472
+ + +G G G+V K G V VK++ + + E+ +L
Sbjct: 17 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 76
Query: 473 ---------GTLGRHLFNWEEEGL---------------EPLEWNTRLNIALDVARG-DD 507
T R L + + L + L + + + RG
Sbjct: 77 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 136
Query: 508 MRVADFGLVRLVPENG-------------------KHSILTKVAGTFGYLAPEYIVTGRI 548
+ AD L P N + VA + +
Sbjct: 137 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHY 196
Query: 549 TAKVDVYSFGMILMDLITGR 568
VD++S G I+ +L+TGR
Sbjct: 197 NQTVDIWSVGCIMAELLTGR 216
|
| >d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase CK2, alpha subunit species: Rattus norvegicus [TaxId: 10116]
Score = 54.1 bits (129), Expect = 2e-08
Identities = 28/219 (12%), Positives = 70/219 (31%), Gaps = 60/219 (27%)
Query: 418 NNFSEENRLGRGGVGTVYKGE-LKDGTEVGVKRMELGSVTEQGIAQFESEITVLTK---- 472
+++ +LGRG V++ + + +V VK ++ + + EI +L
Sbjct: 35 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILK-----PVKKKKIKREIKILENLRGG 89
Query: 473 ---------------------------GTLGRHL--FNWEE---------EGLEPLEWNT 494
+ + + L+
Sbjct: 90 PNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMG 149
Query: 495 RL-------NIALDVARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGR 547
+ N+ +D +R+ D+GL ++ + + PE +V +
Sbjct: 150 IMHRDVKPHNVMID-HEHRKLRLIDWGLAEFYHPGQEY---NVRVASRYFKGPELLVDYQ 205
Query: 548 -ITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLA 585
+D++S G +L +I ++ H + + ++ +A
Sbjct: 206 MYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIA 244
|
| >d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Decorin species: Cow (Bos taurus) [TaxId: 9913]
Score = 53.9 bits (128), Expect = 2e-08
Identities = 24/89 (26%), Positives = 35/89 (39%), Gaps = 12/89 (13%)
Query: 157 TIPDFIGTDTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFP 216
+P + D + LDL NN + F NL L L L +NK++ I P
Sbjct: 24 KVPKDLPPD----TALLDLQNNKITEIKDGDF-------KNLKNLHTLILINNKISKISP 72
Query: 217 VSSFNNHPKLTTLNLTNNLLQGPTPRFNN 245
+F KL L L+ N L+ +
Sbjct: 73 -GAFAPLVKLERLYLSKNQLKELPEKMPK 100
|
| >d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Decorin species: Cow (Bos taurus) [TaxId: 9913]
Score = 52.0 bits (123), Expect = 8e-08
Identities = 26/162 (16%), Positives = 53/162 (32%), Gaps = 2/162 (1%)
Query: 71 SFVIPKRLKWSDPDPCQWSHVICSDDGQVTNIELQDQNRKGTVPPILKKLSSMAVMYLEN 130
+F K+L + + + +T + L LK L+++A + L
Sbjct: 145 AFQGMKKLSYIRIADTNITTIPQGLPPSLTELHLDGNKITKVDAASLKGLNNLAKLGLSF 204
Query: 131 NQLRGPIPSLVGSLEFFSAYEANISGTIPDFIGTDTFPQLSYLDLGNNNLQGTIPSSFGM 190
N + + + N + + G + + L NNN+ I S+
Sbjct: 205 NSISAVDNGSLANTPHLRELHLNNNKLVKVPGGLADHKYIQVVYLHNNNIS-AIGSNDFC 263
Query: 191 PFADISNLSTLEDLSLGHNKLTGI-FPVSSFNNHPKLTTLNL 231
P + ++ +SL N + S+F + L
Sbjct: 264 PPGYNTKKASYSGVSLFSNPVQYWEIQPSTFRCVYVRAAVQL 305
|
| >d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Decorin species: Cow (Bos taurus) [TaxId: 9913]
Score = 51.6 bits (122), Expect = 1e-07
Identities = 22/186 (11%), Positives = 58/186 (31%), Gaps = 25/186 (13%)
Query: 75 PKRLKWSDPDPCQWSHVICSDDGQVTNIELQDQNRK--GTVPPILKKLSSMAVMYLENNQ 132
+ L+ + + + + + Q+ +EL K G + + ++ + + +
Sbjct: 102 LQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTN 161
Query: 133 LRGPIPSLVGSLEFFSAYEANISGTIPDFIGTDTFPQLSYLDLGNNNLQGTIPSS----- 187
+ L SL I+ + L+ L L N++ S
Sbjct: 162 ITTIPQGLPPSLTELHLDGNKITKVDAASL--KGLNNLAKLGLSFNSISAVDNGSLANTP 219
Query: 188 -----------FGMPFADISNLSTLEDLSLGHNKLTGI-----FPVSSFNNHPKLTTLNL 231
+++ ++ + L +N ++ I P + ++L
Sbjct: 220 HLRELHLNNNKLVKVPGGLADHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSL 279
Query: 232 TNNLLQ 237
+N +Q
Sbjct: 280 FSNPVQ 285
|
| >d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Decorin species: Cow (Bos taurus) [TaxId: 9913]
Score = 51.2 bits (121), Expect = 2e-07
Identities = 33/180 (18%), Positives = 50/180 (27%), Gaps = 45/180 (25%)
Query: 86 CQWSHVICSDDGQVTNIELQDQNRKGTVPPILKKLSSMAVMYLENNQLRGPIPSLVGSLE 145
C V CSD VP L A++ L+NN++ +L
Sbjct: 10 CHLRVVQCSD------------LGLEKVPKDL--PPDTALLDLQNNKITEIKDGDFKNL- 54
Query: 146 FFSAYEANISGTIPDFIGTDTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLS 205
L L L NN + P +F L LE L
Sbjct: 55 ----------------------KNLHTLILINNKISKISPGAFA-------PLVKLERLY 85
Query: 206 LGHNKLTGIFPVSSFNNHPKLTTLNLTNNLLQGPTPRFNNSKLTVDMRTGSNCFCLDDPG 265
L N+L + P +L ++ N + V++ T + G
Sbjct: 86 LSKNQLKEL-PEKMPKTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENG 144
|
| >d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Ribosomal protein S6 kinase alpha 5, Msk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 52.9 bits (126), Expect = 5e-08
Identities = 39/207 (18%), Positives = 66/207 (31%), Gaps = 57/207 (27%)
Query: 418 NNFSEENRLGRGGVGTVYKGEL----KDGTEVGVKRMELGSVTE--QGIAQFESEITVLT 471
NF LG G G V+ G +K ++ ++ + + +E VL
Sbjct: 24 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLE 83
Query: 472 K-----------------------------GTLGRHLFNWEE-----------EGLEPLE 491
G L HL E E + LE
Sbjct: 84 HIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALE 143
Query: 492 WNTRLNIA--------LDVARGDDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYI 543
+L I + + + + DFGL + + + GT Y+AP+ +
Sbjct: 144 HLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVAD-ETERAYDFCGTIEYMAPDIV 202
Query: 544 VTGR--ITAKVDVYSFGMILMDLITGR 568
G VD +S G+++ +L+TG
Sbjct: 203 RGGDSGHDKAVDWWSLGVLMYELLTGA 229
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 50.4 bits (118), Expect = 5e-07
Identities = 18/94 (19%), Positives = 29/94 (30%), Gaps = 13/94 (13%)
Query: 167 FPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLT--GIFPVSSF--NN 222
L L L + ++ + SS A + +L +L L +N L GI +
Sbjct: 368 GSVLRVLWLADCDVSDSSCSSLA---ATLLANHSLRELDLSNNCLGDAGILQLVESVRQP 424
Query: 223 HPKLTTLNLTNNLLQGPTPRF------NNSKLTV 250
L L L + + L V
Sbjct: 425 GCLLEQLVLYDIYWSEEMEDRLQALEKDKPSLRV 458
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 46.1 bits (107), Expect = 1e-05
Identities = 15/76 (19%), Positives = 24/76 (31%), Gaps = 9/76 (11%)
Query: 170 LSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFP---VSSFNNHPKL 226
+ LD+ L + + L + + L LT S+ +P L
Sbjct: 4 IQSLDIQCEELSDARWAEL------LPLLQQCQVVRLDDCGLTEARCKDISSALRVNPAL 57
Query: 227 TTLNLTNNLLQGPTPR 242
LNL +N L
Sbjct: 58 AELNLRSNELGDVGVH 73
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 44.2 bits (102), Expect = 4e-05
Identities = 12/72 (16%), Positives = 22/72 (30%), Gaps = 7/72 (9%)
Query: 167 FPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGI----FPVSSFNN 222
Q + L + L + + L +L+L N+L +
Sbjct: 26 LQQCQVVRLDDCGLTEARCKDIS---SALRVNPALAELNLRSNELGDVGVHCVLQGLQTP 82
Query: 223 HPKLTTLNLTNN 234
K+ L+L N
Sbjct: 83 SCKIQKLSLQNC 94
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} Length = 353 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Score = 46.7 bits (109), Expect = 4e-06
Identities = 16/72 (22%), Positives = 25/72 (34%), Gaps = 16/72 (22%)
Query: 167 FPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKL 226
P L L++ NN L +P+ LE L N L + + L
Sbjct: 283 PPSLEELNVSNNKLI-ELPALPP----------RLERLIASFNHLAEVPELP-----QNL 326
Query: 227 TTLNLTNNLLQG 238
L++ N L+
Sbjct: 327 KQLHVEYNPLRE 338
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} Length = 353 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Score = 44.0 bits (102), Expect = 3e-05
Identities = 19/154 (12%), Positives = 38/154 (24%), Gaps = 43/154 (27%)
Query: 80 WSDPDPCQWSHVICSDDGQVTNIELQDQNRKGTVPPILKKLSSMAVMYLENNQLRGPIPS 139
S I S ++ + + S+ + + NN+L
Sbjct: 243 PQSLTFLDVSENIFSGLSELPPNLYYLNASSNEIRSLCDLPPSLEELNVSNNKLI----- 297
Query: 140 LVGSLEFFSAYEANISGTIPDFIGTDTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLS 199
+P P+L L N+L +P
Sbjct: 298 -----------------ELPALP-----PRLERLIASFNHLA-EVPEL----------PQ 324
Query: 200 TLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTN 233
L+ L + +N L + + L + +
Sbjct: 325 NLKQLHVEYNPLREFPDIPE-----SVEDLRMNS 353
|
| >d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]} Length = 227 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin H species: Listeria monocytogenes [TaxId: 1639]
Score = 45.0 bits (105), Expect = 9e-06
Identities = 14/67 (20%), Positives = 29/67 (43%), Gaps = 12/67 (17%)
Query: 167 FPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKL 226
+L+ L +N + P +++L L ++ L +N+++ + P N L
Sbjct: 172 LSKLTTLKADDNKISDISP---------LASLPNLIEVHLKNNQISDVSP---LANTSNL 219
Query: 227 TTLNLTN 233
+ LTN
Sbjct: 220 FIVTLTN 226
|
| >d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]} Length = 227 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin H species: Listeria monocytogenes [TaxId: 1639]
Score = 40.8 bits (94), Expect = 2e-04
Identities = 20/109 (18%), Positives = 35/109 (32%), Gaps = 16/109 (14%)
Query: 152 ANISGTIPDFIGTDTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKL 211
I+ PD + G +N+ T+ ++L + LS +
Sbjct: 7 TAINVIFPD----PALANAIKIAAGKSNVTDTVT---------QADLDGITTLSAFGTGV 53
Query: 212 TGIFPVSSFNNHPKLTTLNLTNNLLQGPTPRFNNSKLTVDMRTGSNCFC 260
T I L L L +N + P N +K+T +G+
Sbjct: 54 TTI---EGVQYLNNLIGLELKDNQITDLAPLKNLTKITELELSGNPLKN 99
|
| >d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]} Length = 227 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin H species: Listeria monocytogenes [TaxId: 1639]
Score = 39.2 bits (90), Expect = 8e-04
Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Query: 195 ISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNNLLQGPTPRFNNSKLTV 250
++NLS L L NK++ I P++S P L ++L NN + +P N S L +
Sbjct: 169 LANLSKLTTLKADDNKISDISPLASL---PNLIEVHLKNNQISDVSPLANTSNLFI 221
|
| >d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]} Length = 227 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin H species: Listeria monocytogenes [TaxId: 1639]
Score = 36.9 bits (84), Expect = 0.004
Identities = 12/51 (23%), Positives = 20/51 (39%), Gaps = 9/51 (17%)
Query: 158 IPDFIGTDTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGH 208
I D + P L + L NN + P ++N S L ++L +
Sbjct: 185 ISDISPLASLPNLIEVHLKNNQISDVSP---------LANTSNLFIVTLTN 226
|
| >d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Sky1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 45.8 bits (107), Expect = 1e-05
Identities = 19/127 (14%), Positives = 43/127 (33%), Gaps = 11/127 (8%)
Query: 477 RHLFNWEEEGLEPLEWN--------TRLNIALDVARGDDMRVADFGLVRLVPENGKHSIL 528
+ + GL+ + N+ ++ + + L
Sbjct: 128 KQISKQLLLGLDYMHRRCGIIHTDIKPENVLME-IVDSPENLIQIKIADLGNACWYDEHY 186
Query: 529 TKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDA--THSDPEYIIHLAT 586
T T Y +PE ++ D++S ++ +LITG + + HS + H+A
Sbjct: 187 TNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQ 246
Query: 587 WFQKMHK 593
+ + +
Sbjct: 247 IIELLGE 253
|
| >d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Sky1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 38.1 bits (87), Expect = 0.002
Identities = 13/51 (25%), Positives = 23/51 (45%), Gaps = 4/51 (7%)
Query: 423 ENRLGRGGVGTVYKGE-LKDGTEVGVKRMELGSVTEQGIAQFESEITVLTK 472
+LG G TV+ + + + T V +K + V + E EI +L +
Sbjct: 18 VRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTE---AAEDEIKLLQR 65
|
| >d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]} Length = 198 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: Outer arm dynein light chain 1 family: Outer arm dynein light chain 1 domain: Outer arm dynein light chain 1 species: Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]
Score = 44.3 bits (103), Expect = 1e-05
Identities = 20/75 (26%), Positives = 28/75 (37%), Gaps = 5/75 (6%)
Query: 157 TIPDFIGTDT-FPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIF 215
TI D I + + L G IP M A +S L + L+L N + I
Sbjct: 6 TIKDAIRIFEERKSVVATEAEKVELHGMIPPIEKMD-ATLSTLKACKHLALSTNNIEKI- 63
Query: 216 PVSSFNNHPKLTTLN 230
SS + L L+
Sbjct: 64 --SSLSGMENLRILS 76
|
| >d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 344 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Rna1p (RanGAP1), N-terminal domain domain: Rna1p (RanGAP1), N-terminal domain species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Score = 44.9 bits (104), Expect = 2e-05
Identities = 13/66 (19%), Positives = 23/66 (34%), Gaps = 5/66 (7%)
Query: 175 LGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTG----IFPVSSFNNHPKLTTLN 230
L + L ++ F+ + N+ L+ L L +N++ P L L
Sbjct: 250 LNDCLLSARGAAAVVDAFSKLENIG-LQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLE 308
Query: 231 LTNNLL 236
L N
Sbjct: 309 LNGNRF 314
|
| >d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 344 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Rna1p (RanGAP1), N-terminal domain domain: Rna1p (RanGAP1), N-terminal domain species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Score = 41.8 bits (96), Expect = 2e-04
Identities = 9/55 (16%), Positives = 16/55 (29%), Gaps = 2/55 (3%)
Query: 158 IPDFIGTDTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLT 212
+ D L L L N ++ + + L L L N+ +
Sbjct: 263 VVDAFSKLENIGLQTLRLQYNEIELDAVRTL--KTVIDEKMPDLLFLELNGNRFS 315
|
| >d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} Length = 191 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: RIO1-like kinases domain: Rio2 serine protein kinase C-terminal domain species: Archaeoglobus fulgidus [TaxId: 2234]
Score = 42.1 bits (98), Expect = 7e-05
Identities = 27/173 (15%), Positives = 54/173 (31%), Gaps = 10/173 (5%)
Query: 424 NRLGRGGVGTVYKGELKDGTEVGVKRMELGSVTEQGIAQFESEITVLTKGTLGRHLFNWE 483
+G G V+ + E VK ++G + + + + + L L E
Sbjct: 6 KLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKR-DYGDLHFSVLAIRSARNE 64
Query: 484 EEGLEPLEWNTRLNIALDVARGD-DMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEY 542
L+ L + M + D + V +L +
Sbjct: 65 FRALQKL-QGLAVPKVYAWEGNAVLMELIDAKELYRVRVENPDEVLDMILEEVAKFYHRG 123
Query: 543 IVTGRIT-AKVDVYSFGMILMDLITGRKVVDATHSDPEY----IIHLATWFQK 590
IV G ++ V V G+ ++D + V E + ++ T+F +
Sbjct: 124 IVHGDLSQYNVLVSEEGIWIIDF--PQSVEVGEEGWREILERDVRNIITYFSR 174
|
| >d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]} Length = 284 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Cyclin A/CDK2-associated p19, Skp2 domain: Cyclin A/CDK2-associated p19, Skp2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 42.8 bits (99), Expect = 7e-05
Identities = 17/105 (16%), Positives = 40/105 (38%), Gaps = 12/105 (11%)
Query: 128 LENNQLRGPIPSLVGSLEF--FSAYEANISGTIPDFIGTDTFPQLSYLDLGNNNLQGTIP 185
L L + + S F + + + + + ++ ++DL N+ ++ +
Sbjct: 7 LTGKNLHPDVTGRLLSQGVIAFRCPRSFMDQPLAEHF---SPFRVQHMDLSNSVIEVSTL 63
Query: 186 SSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLN 230
+S S L++LSL +L+ ++ + L LN
Sbjct: 64 HGI------LSQCSKLQNLSLEGLRLSDPIV-NTLAKNSNLVRLN 101
|
| >d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]} Length = 284 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Cyclin A/CDK2-associated p19, Skp2 domain: Cyclin A/CDK2-associated p19, Skp2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 37.4 bits (85), Expect = 0.003
Identities = 18/94 (19%), Positives = 29/94 (30%), Gaps = 17/94 (18%)
Query: 173 LDLGNNNLQGTIP---------------SSFGMPFADISNLSTLEDLSLGHNKLTGIFPV 217
LDL NL + S P A+ + ++ + L ++ +
Sbjct: 5 LDLTGKNLHPDVTGRLLSQGVIAFRCPRSFMDQPLAEHFSPFRVQHMDLSNSVIEVSTLH 64
Query: 218 SSFNNHPKLTTLNLTNNLLQGPTPRF--NNSKLT 249
+ KL L+L L P NS L
Sbjct: 65 GILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLV 98
|
| >d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 266 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: von Willebrand factor binding domain of glycoprotein Ib alpha species: Human (Homo sapiens) [TaxId: 9606]
Score = 42.4 bits (98), Expect = 8e-05
Identities = 14/88 (15%), Positives = 24/88 (27%), Gaps = 11/88 (12%)
Query: 173 LDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLT 232
++ NL +P L L N L +++ + +LT LNL
Sbjct: 15 VNCDKRNLT-ALPPDLP---------KDTTILHLSENLLYTF-SLATLMPYTRLTQLNLD 63
Query: 233 NNLLQGPTPRFNNSKLTVDMRTGSNCFC 260
L L + +
Sbjct: 64 RAELTKLQVDGTLPVLGTLDLSHNQLQS 91
|
| >d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 242 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Follicle-stimulating hormone receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 42.2 bits (97), Expect = 8e-05
Identities = 8/45 (17%), Positives = 14/45 (31%), Gaps = 1/45 (2%)
Query: 190 MPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNN 234
+P S L + ++ + P N KL + N
Sbjct: 192 LPNDVFHGASGPVILDISRTRIHSL-PSYGLENLKKLRARSTYNL 235
|
| >d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]} Length = 210 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Score = 39.6 bits (91), Expect = 4e-04
Identities = 8/40 (20%), Positives = 18/40 (45%), Gaps = 3/40 (7%)
Query: 194 DISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTN 233
++ L+ L++L L N ++ + + L L L +
Sbjct: 173 PLAGLTKLQNLYLSKNHISDL---RALAGLKNLDVLELFS 209
|
| >d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]} Length = 162 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: U2A'-like domain: Splicesomal U2A' protein species: Human (Homo sapiens) [TaxId: 9606]
Score = 38.0 bits (87), Expect = 0.001
Identities = 7/57 (12%), Positives = 20/57 (35%), Gaps = 2/57 (3%)
Query: 196 SNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNNLLQGPTPRFNNSKLTVDM 252
+N +L L K+ I + + ++ ++N ++ +L +
Sbjct: 15 TNAVRDRELDLRGYKIPVI--ENLGATLDQFDAIDFSDNEIRKLDGFPLLRRLKTLL 69
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 631 | |||
| d1uwha_ | 276 | B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} | 99.96 | |
| d2java1 | 269 | Serine/threonine-protein kinase Nek2 {Human (Homo | 99.96 | |
| d1ogqa_ | 313 | Polygalacturonase inhibiting protein PGIP {Kidney | 99.96 | |
| d1qpca_ | 272 | Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax | 99.96 | |
| d1sm2a_ | 263 | Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie | 99.96 | |
| d1nvra_ | 271 | Cell cycle checkpoint kinase chk1 {Human (Homo sap | 99.96 | |
| d1lufa_ | 301 | Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax | 99.96 | |
| d2j4za1 | 263 | Aurora-related kinase 1 (aurora-2) {Human (Homo sa | 99.96 | |
| d1k2pa_ | 258 | Bruton's tyrosine kinase (Btk) {Human (Homo sapien | 99.96 | |
| d1yhwa1 | 293 | pak1 {Human (Homo sapiens) [TaxId: 9606]} | 99.96 | |
| d1t4ha_ | 270 | Protein kinase wnk1 {Human (Homo sapiens) [TaxId: | 99.95 | |
| d1opja_ | 287 | Abelsone tyrosine kinase (abl) {Mouse (Mus musculu | 99.95 | |
| d1uu3a_ | 288 | 3-phosphoinositide dependent protein kinase-1 Pdk1 | 99.95 | |
| d1u59a_ | 285 | Tyrosine-protein kinase ZAP-70 {Human (Homo sapien | 99.95 | |
| d1jpaa_ | 299 | ephb2 receptor tyrosine kinase {Mouse (Mus musculu | 99.95 | |
| d1rjba_ | 325 | Fl cytokine receptor {Human (Homo sapiens) [TaxId: | 99.95 | |
| d1mqba_ | 283 | epha2 receptor tyrosine kinase {Human (Homo sapien | 99.95 | |
| d1ywna1 | 299 | Vascular endothelial growth factor receptor 2 (kdr | 99.95 | |
| d1a06a_ | 307 | Calmodulin-dependent protein kinase {Rat (Rattus n | 99.95 | |
| d1fmka3 | 285 | c-src tyrosine kinase {Human (Homo sapiens) [TaxId | 99.95 | |
| d1s9ja_ | 322 | Dual specificity mitogen-activated protein kinase | 99.95 | |
| d1xbba_ | 277 | Tyrosine-protein kinase SYK {Human (Homo sapiens) | 99.95 | |
| d2jfla1 | 288 | STE20-like serine/threonine-protein kinase, SLK {H | 99.95 | |
| d1xkka_ | 317 | EGF receptor tyrosine kinase, Erbb-1 {Human (Homo | 99.95 | |
| d1koaa2 | 350 | Twitchin, kinase domain {Caenorhabditis elegans, p | 99.95 | |
| d1u5ra_ | 309 | Serine/threonine protein kinase TAO2 {Rat (Rattus | 99.95 | |
| d1jksa_ | 293 | Death-associated protein kinase, Dap {Human (Homo | 99.94 | |
| d1o6la_ | 337 | Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9 | 99.94 | |
| d1mp8a_ | 273 | Focal adhesion kinase 1 (fak) {Human (Homo sapiens | 99.94 | |
| d1fota_ | 316 | cAMP-dependent PK, catalytic subunit {Baker's yeas | 99.94 | |
| d1rdqe_ | 350 | cAMP-dependent PK, catalytic subunit {Mouse (Mus m | 99.94 | |
| d1p4oa_ | 308 | Insulin-like growth factor 1 receptor {Human (Homo | 99.94 | |
| d1byga_ | 262 | Carboxyl-terminal src kinase (csk) {Human (Homo sa | 99.94 | |
| d1koba_ | 352 | Twitchin, kinase domain {California sea hare (Aply | 99.94 | |
| d1o6ya_ | 277 | Mycobacterial protein kinase PknB, catalytic domai | 99.94 | |
| d1t46a_ | 311 | c-KIT receptor {Human (Homo sapiens) [TaxId: 9606] | 99.93 | |
| d1xjda_ | 320 | Protein kinase C, theta type {Human (Homo sapiens) | 99.93 | |
| d1u46a_ | 273 | Activated CDC42 kinase 1, ACK1 {Human (Homo sapien | 99.93 | |
| d1fvra_ | 309 | Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} | 99.93 | |
| d1r0pa_ | 311 | Hepatocyte growth factor receptor, c-MET {Human (H | 99.93 | |
| d1phka_ | 277 | gamma-subunit of glycogen phosphorylase kinase (Ph | 99.93 | |
| d1blxa_ | 305 | Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T | 99.93 | |
| d1gz8a_ | 298 | Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T | 99.93 | |
| d2ozaa1 | 335 | MAP kinase activated protein kinase 2, mapkap2 {Hu | 99.93 | |
| d1tkia_ | 321 | Titin, kinase domain {Human (Homo sapiens) [TaxId: | 99.93 | |
| d1omwa3 | 364 | G-protein coupled receptor kinase 2 {Cow (Bos taur | 99.93 | |
| d1xwsa_ | 273 | Proto-oncogene serine/threonine-protein kinase Pim | 99.93 | |
| d1ob3a_ | 286 | Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) | 99.93 | |
| d1ua2a_ | 299 | Cell division protein kinase 7, CDK7 {Human (Homo | 99.92 | |
| d1ckia_ | 299 | Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax | 99.92 | |
| d1fgka_ | 299 | Fibroblast growth factor receptor 1 {Human (Homo s | 99.92 | |
| d1pmea_ | 345 | MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606 | 99.92 | |
| d1vjya_ | 303 | Type I TGF-beta receptor R4 {Human (Homo sapiens) | 99.92 | |
| d3blha1 | 318 | Cell division protein kinase 9, CDK9 {Human (Homo | 99.92 | |
| d1csna_ | 293 | Casein kinase-1, CK1 {Fission yeast (Schizosacchar | 99.91 | |
| d1unla_ | 292 | Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T | 99.91 | |
| d1cm8a_ | 346 | MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: | 99.91 | |
| d1vzoa_ | 322 | Ribosomal protein S6 kinase alpha 5, Msk1 {Human ( | 99.9 | |
| d2gfsa1 | 348 | MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606] | 99.9 | |
| d1q5ka_ | 350 | Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho | 99.9 | |
| d3bqca1 | 328 | Protein kinase CK2, alpha subunit {Rattus norvegic | 99.89 | |
| d2b1pa1 | 355 | c-jun N-terminal kinase (jnk3s) {Human (Homo sapie | 99.89 | |
| d1q8ya_ | 362 | Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T | 99.85 | |
| d1ogqa_ | 313 | Polygalacturonase inhibiting protein PGIP {Kidney | 99.74 | |
| d1p9ag_ | 266 | von Willebrand factor binding domain of glycoprote | 99.64 | |
| d1w8aa_ | 192 | Slit {Fruit fly (Drosophila melanogaster) [TaxId: | 99.62 | |
| d1p9ag_ | 266 | von Willebrand factor binding domain of glycoprote | 99.61 | |
| d1ozna_ | 284 | Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Huma | 99.6 | |
| d1w8aa_ | 192 | Slit {Fruit fly (Drosophila melanogaster) [TaxId: | 99.59 | |
| d1ozna_ | 284 | Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Huma | 99.52 | |
| d1xkua_ | 305 | Decorin {Cow (Bos taurus) [TaxId: 9913]} | 99.47 | |
| d1xkua_ | 305 | Decorin {Cow (Bos taurus) [TaxId: 9913]} | 99.47 | |
| d1dcea3 | 124 | Rab geranylgeranyltransferase alpha-subunit, C-ter | 99.39 | |
| d2omxa2 | 199 | Internalin B {Listeria monocytogenes [TaxId: 1639] | 99.34 | |
| d2omza2 | 384 | Internalin A {Listeria monocytogenes [TaxId: 1639] | 99.3 | |
| d1a9na_ | 162 | Splicesomal U2A' protein {Human (Homo sapiens) [Ta | 99.3 | |
| d1a9na_ | 162 | Splicesomal U2A' protein {Human (Homo sapiens) [Ta | 99.28 | |
| d1h6ua2 | 227 | Internalin H {Listeria monocytogenes [TaxId: 1639] | 99.26 | |
| d1h6ta2 | 210 | Internalin B {Listeria monocytogenes [TaxId: 1639] | 99.25 | |
| d2omxa2 | 199 | Internalin B {Listeria monocytogenes [TaxId: 1639] | 99.25 | |
| d1h6ta2 | 210 | Internalin B {Listeria monocytogenes [TaxId: 1639] | 99.25 | |
| d1dcea3 | 124 | Rab geranylgeranyltransferase alpha-subunit, C-ter | 99.23 | |
| d2omza2 | 384 | Internalin A {Listeria monocytogenes [TaxId: 1639] | 99.2 | |
| d1h6ua2 | 227 | Internalin H {Listeria monocytogenes [TaxId: 1639] | 99.2 | |
| d2ifga3 | 156 | High affinity nerve growth factor receptor, N-term | 99.1 | |
| d1xwdc1 | 242 | Follicle-stimulating hormone receptor {Human (Homo | 99.06 | |
| d1m9la_ | 198 | Outer arm dynein light chain 1 {Green algae (Chlam | 99.04 | |
| d1xwdc1 | 242 | Follicle-stimulating hormone receptor {Human (Homo | 99.01 | |
| d2ifga3 | 156 | High affinity nerve growth factor receptor, N-term | 99.0 | |
| d1m9la_ | 198 | Outer arm dynein light chain 1 {Green algae (Chlam | 98.89 | |
| d1jl5a_ | 353 | Leucine rich effector protein YopM {Yersinia pesti | 98.88 | |
| d1jl5a_ | 353 | Leucine rich effector protein YopM {Yersinia pesti | 98.79 | |
| d1zara2 | 191 | Rio2 serine protein kinase C-terminal domain {Arch | 98.58 | |
| d2astb2 | 284 | Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sa | 98.09 | |
| d2ca6a1 | 344 | Rna1p (RanGAP1), N-terminal domain {Fission yeast | 98.05 | |
| d1z7xw1 | 460 | Ribonuclease inhibitor {Human (Homo sapiens) [TaxI | 97.87 | |
| d2ca6a1 | 344 | Rna1p (RanGAP1), N-terminal domain {Fission yeast | 97.86 | |
| d1koha1 | 162 | mRNA export factor tap {Human (Homo sapiens) [TaxI | 97.83 | |
| d1z7xw1 | 460 | Ribonuclease inhibitor {Human (Homo sapiens) [TaxI | 97.83 | |
| d2astb2 | 284 | Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sa | 97.79 | |
| d1koha1 | 162 | mRNA export factor tap {Human (Homo sapiens) [TaxI | 97.76 | |
| d1pgva_ | 167 | Tropomodulin C-terminal domain {nematode (Caenorha | 96.2 | |
| d1pgva_ | 167 | Tropomodulin C-terminal domain {nematode (Caenorha | 94.72 | |
| d1io0a_ | 166 | Tropomodulin C-terminal domain {Chicken (Gallus ga | 93.02 |
| >d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: B-Raf kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.96 E-value=3e-30 Score=259.27 Aligned_cols=200 Identities=24% Similarity=0.403 Sum_probs=149.6
Q ss_pred cCCcccceeecCCCceEEEEEEecCCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc------------------------
Q 042825 417 TNNFSEENRLGRGGVGTVYKGELKDGTEVGVKRMELGSVTEQGIAQFESEITVLTK------------------------ 472 (631)
Q Consensus 417 t~~f~~~~~iG~G~fg~Vyk~~~~~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~------------------------ 472 (631)
.++|...+.||+|+||+||+|+++ ..||||+++.........++|.+|++++.+
T Consensus 7 ~~~~~~~~~lG~G~fg~Vy~~~~~--~~vAvK~~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~~~~~~~~~~lv~Ey 84 (276)
T d1uwha_ 7 DGQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTAPQLAIVTQW 84 (276)
T ss_dssp TTCCCCCSEEEECSSCEEEEEESS--SEEEEEECCCSSCCTTHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSCEEEEEC
T ss_pred cccEEEEEEEeeCCCcEEEEEEEC--CEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeeeEEEeccEEEEEEec
Confidence 457888899999999999999875 369999998766566678899999999987
Q ss_pred ---CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCCcc
Q 042825 473 ---GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENGKH 525 (631)
Q Consensus 473 ---gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~~~ 525 (631)
|+|.++++. ....++|..++.|+.++|+| +.+||+|||+|+........
T Consensus 85 ~~~g~L~~~l~~----~~~~~~~~~~~~i~~qi~~gl~yLH~~~ivHrDlKp~NiLl~~~~~~Kl~DFGla~~~~~~~~~ 160 (276)
T d1uwha_ 85 CEGSSLYHHLHI----IETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGS 160 (276)
T ss_dssp CCEEEHHHHHHT----SCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTSSEEECCCCCSCC-------
T ss_pred CCCCCHHHHHhh----ccCCCCHHHHHHHHHHHHHHHHHHhcCCEeccccCHHHEEEcCCCCEEEccccceeeccccCCc
Confidence 677777742 23468999999999999988 56799999999887533333
Q ss_pred ccccccccCccccccccccc---CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHh-H----h-hhcCCh
Q 042825 526 SILTKVAGTFGYLAPEYIVT---GRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWF-Q----K-MHKNHD 596 (631)
Q Consensus 526 ~~~~~~~gt~~Y~aPE~~~~---~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~-~----~-~~~~~~ 596 (631)
.......||+.|||||++.+ ..|+.++|||||||++|||+||+.||.+..........+..-. . . ....++
T Consensus 161 ~~~~~~~gt~~y~APE~l~~~~~~~~~~~sDiwS~Gv~l~el~tg~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 240 (276)
T d1uwha_ 161 HQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPK 240 (276)
T ss_dssp -----CCCCGGGCCHHHHTTCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHHTSCCCCGGGSCTTCCH
T ss_pred ccccccccCcccCCHHHHhcccCCCCCchhhhhhhHHHHHHHHHCCCCCCCCChHHHHHHHHhcCCCCCcchhccccchH
Confidence 34456789999999999864 3589999999999999999999999987544322222221111 0 0 111246
Q ss_pred hHHHHHHhhcCCChhhHHhHHHHHHH
Q 042825 597 TFQMAIDKTIQLDEENLANVSTVAEL 622 (631)
Q Consensus 597 ~l~~~id~~L~~d~~~r~~~~~vl~l 622 (631)
++.+++.+|+..||.+||++.++++.
T Consensus 241 ~l~~li~~cl~~dp~~RPt~~~il~~ 266 (276)
T d1uwha_ 241 AMKRLMAECLKKKRDERPLFPQILAS 266 (276)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence 89999999999999999999998864
|
| >d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine-protein kinase Nek2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.96 E-value=9.3e-31 Score=262.00 Aligned_cols=200 Identities=21% Similarity=0.308 Sum_probs=150.0
Q ss_pred CCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc------------------------
Q 042825 418 NNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK------------------------ 472 (631)
Q Consensus 418 ~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~------------------------ 472 (631)
++|+..+.||+|+||+||+|+.+ +|+.||||++......+...+.+.+|++++.+
T Consensus 4 edy~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~iv 83 (269)
T d2java1 4 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIV 83 (269)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCTTSCHHHHHHHHHHHHHTTSCCCTTBCCEEEEEEC----CEEEE
T ss_pred hhCEEeEEEecCCCeEEEEEEECCCCCEEEEEEEChhhCCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEeCCCCEEEEE
Confidence 67999999999999999999975 69999999998877777777889999999976
Q ss_pred ------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC-----------------------------CCcEEEeecccc
Q 042825 473 ------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG-----------------------------DDMRVADFGLVR 517 (631)
Q Consensus 473 ------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g-----------------------------~~~kl~DFGla~ 517 (631)
|+|.+++..... ....+++.....++.+++.| +.+||+|||+|+
T Consensus 84 mEy~~~g~L~~~i~~~~~-~~~~l~e~~~~~i~~qi~~al~ylH~~~~~~~~IiHrDiKp~NIll~~~~~vkl~DFG~a~ 162 (269)
T d2java1 84 MEYCEGGDLASVITKGTK-ERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLAR 162 (269)
T ss_dssp EECCTTEEHHHHHHHHHH-HTCCCCHHHHHHHHHHHHHHHHHHHHHCC---------CCGGGEEECTTSCEEECCHHHHH
T ss_pred EecCCCCcHHHHHHhccc-cCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCEEeCcCchhhcCcCCCCcEEEeecccee
Confidence 677776654322 23467787777777666654 567999999999
Q ss_pred ccCCCCccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHh-Hh-hhcCC
Q 042825 518 LVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWF-QK-MHKNH 595 (631)
Q Consensus 518 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~-~~-~~~~~ 595 (631)
.+... .......+||+.|||||++.+..|+.++|||||||++|||+||+.||.+....+ ....+.... .. ....+
T Consensus 163 ~~~~~--~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyel~tg~~Pf~~~~~~~-~~~~i~~~~~~~~~~~~s 239 (269)
T d2java1 163 ILNHD--TSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKE-LAGKIREGKFRRIPYRYS 239 (269)
T ss_dssp HC-------------CCCSCCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHTCCCCCCTTSC
T ss_pred ecccC--CCccccCCCCcccCCHHHHcCCCCChHHHHHhhCHHHHHHhhCCCCCCCCCHHH-HHHHHHcCCCCCCCcccC
Confidence 87422 223456789999999999999999999999999999999999999998653321 111122111 11 11235
Q ss_pred hhHHHHHHhhcCCChhhHHhHHHHHH
Q 042825 596 DTFQMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 596 ~~l~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
+++.+++.+||..||.+|+++.++++
T Consensus 240 ~~l~~li~~~L~~dp~~Rps~~ell~ 265 (269)
T d2java1 240 DELNEIITRMLNLKDYHRPSVEEILE 265 (269)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HHHHHHHHHHcCCChhHCcCHHHHHh
Confidence 78999999999999999999998864
|
| >d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Polygalacturonase inhibiting protein PGIP domain: Polygalacturonase inhibiting protein PGIP species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Probab=99.96 E-value=2.7e-30 Score=264.89 Aligned_cols=205 Identities=26% Similarity=0.484 Sum_probs=143.1
Q ss_pred CChhhHHHHHHHHHhCCCCCCC-CC-CCCCCCC--ccceeeCCCC---CeEEEEeCCCCCcc--cCcchhcCCccCceee
Q 042825 57 QSRPDAAVMQDLKASFVIPKRL-KW-SDPDPCQ--WSHVICSDDG---QVTNIELQDQNRKG--TVPPILKKLSSMAVMY 127 (631)
Q Consensus 57 ~~~~~~~~l~~~k~~~~~~~~~-~w-~~~~~C~--w~gv~C~~~~---~l~~l~l~~n~l~g--~ip~~~~~l~~L~~L~ 127 (631)
|.+.|.+||++||+++.++..+ +| .++|||. |.||+|+..+ +|+.|+|++++++| .+|+++++|++|++|+
T Consensus 3 c~~~e~~aLl~~k~~~~~~~~l~sW~~~~d~C~~~w~gv~C~~~~~~~~v~~L~L~~~~l~g~~~lp~~l~~L~~L~~L~ 82 (313)
T d1ogqa_ 3 CNPQDKQALLQIKKDLGNPTTLSSWLPTTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLY 82 (313)
T ss_dssp SCHHHHHHHHHHHHHTTCCGGGTTCCTTSCTTTTCSTTEEECCSSSCCCEEEEEEECCCCSSCEECCGGGGGCTTCSEEE
T ss_pred CCHHHHHHHHHHHHHCCCCCcCCCCCCCCCCCCCcCCCeEEeCCCCcEEEEEEECCCCCCCCCCCCChHHhcCccccccc
Confidence 7889999999999999887654 78 5679994 9999998643 79999999999998 5899999999999999
Q ss_pred ccc-CcccCCCCcCcc---cccccccccccceecCC------------------------CCCCcCCCCCCcEEEccCCc
Q 042825 128 LEN-NQLRGPIPSLVG---SLEFFSAYEANISGTIP------------------------DFIGTDTFPQLSYLDLGNNN 179 (631)
Q Consensus 128 L~~-N~l~g~lP~~~~---~L~~L~l~~n~l~g~ip------------------------~~~~~~~l~~L~~L~Ls~N~ 179 (631)
|++ |+|+|.+|..++ +|++|+|++|++.+..| ..++ .+++|+.+++++|.
T Consensus 83 Ls~~N~l~g~iP~~i~~L~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~l~l~~N~~~~~~p~~l~--~l~~L~~l~l~~n~ 160 (313)
T d1ogqa_ 83 IGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSIS--SLPNLVGITFDGNR 160 (313)
T ss_dssp EEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGG--GCTTCCEEECCSSC
T ss_pred cccccccccccccccccccccchhhhccccccccccccccchhhhcccccccccccccCchhhc--cCcccceeeccccc
Confidence 986 899999998876 67777777777665544 3444 56677777777777
Q ss_pred ccccCCCCCCC-----------------------------------------CccCcCCCCCCCEEEeecCcCcccCChh
Q 042825 180 LQGTIPSSFGM-----------------------------------------PFADISNLSTLEDLSLGHNKLTGIFPVS 218 (631)
Q Consensus 180 l~g~iP~~~~~-----------------------------------------~~~~~~~l~~L~~L~L~~N~l~g~iP~~ 218 (631)
++|.+|..++. .+..++.+++|+.|++++|.++|.+| .
T Consensus 161 l~~~ip~~~~~l~~l~~~l~~~~n~l~~~~~~~~~~l~~~~l~l~~~~~~~~~~~~~~~~~~l~~l~~~~~~l~~~~~-~ 239 (313)
T d1ogqa_ 161 ISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLNLAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLG-K 239 (313)
T ss_dssp CEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCCCSEEECCSSEEEECCGGGCCTTSCCSEEECCSSEECCBGG-G
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc-c
Confidence 77777764420 11123445555555555555555444 2
Q ss_pred hccCCCCCCEEEccCCCCcccCCCCCC-CCceEEeecCCCcccCCCCC
Q 042825 219 SFNNHPKLTTLNLTNNLLQGPTPRFNN-SKLTVDMRTGSNCFCLDDPG 265 (631)
Q Consensus 219 ~~~~l~~L~~L~ls~N~l~g~~p~~~~-~~~~~~l~~~~n~~~~~~~~ 265 (631)
++.+++|+.|+|++|+|+|.+|.... +.....+++++|+++|.+|.
T Consensus 240 -~~~~~~L~~L~Ls~N~l~g~iP~~l~~L~~L~~L~Ls~N~l~g~iP~ 286 (313)
T d1ogqa_ 240 -VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQ 286 (313)
T ss_dssp -CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCC
T ss_pred -cccccccccccCccCeecccCChHHhCCCCCCEEECcCCcccccCCC
Confidence 45555566666666666655554322 22333445566666655553
|
| >d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Lymphocyte kinase (lck) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.96 E-value=2.3e-30 Score=259.79 Aligned_cols=199 Identities=26% Similarity=0.384 Sum_probs=153.0
Q ss_pred cCCcccceeecCCCceEEEEEEecCCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc------------------------
Q 042825 417 TNNFSEENRLGRGGVGTVYKGELKDGTEVGVKRMELGSVTEQGIAQFESEITVLTK------------------------ 472 (631)
Q Consensus 417 t~~f~~~~~iG~G~fg~Vyk~~~~~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~------------------------ 472 (631)
.++|+..+.||+|+||+||+|++++++.||||+++.... ..++|.+|++++.+
T Consensus 12 ~~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~---~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~iv~Ey 88 (272)
T d1qpca_ 12 RETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSM---SPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIITEY 88 (272)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTSS---CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCEEEEEC
T ss_pred HHHeEEeEEEecCCCcEEEEEEECCCCEEEEEEEccCcC---CHHHHHHHHHHHHhCCCCCEeEEEeeeccCCeEEEEEe
Confidence 457888999999999999999998889999999976543 34679999999977
Q ss_pred ---CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCCcc
Q 042825 473 ---GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENGKH 525 (631)
Q Consensus 473 ---gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~~~ 525 (631)
|+|.+++.... ...++|..+++|+.++|+| +.+||+|||+|+.+... ..
T Consensus 89 ~~~g~L~~~~~~~~---~~~l~~~~~~~i~~qi~~gl~~lH~~~ivHrDiKp~NIll~~~~~~Kl~DFGla~~~~~~-~~ 164 (272)
T d1qpca_ 89 MENGSLVDFLKTPS---GIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDN-EY 164 (272)
T ss_dssp CTTCBHHHHTTSHH---HHTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECSSS-CE
T ss_pred CCCCcHHHHHhhcC---CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCccchhheeeecccceeeccccceEEccCC-cc
Confidence 67776664321 2358999999999999987 56799999999987532 22
Q ss_pred ccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHhHhhh--cCChhHHHHHH
Q 042825 526 SILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQKMH--KNHDTFQMAID 603 (631)
Q Consensus 526 ~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~~~~~--~~~~~l~~~id 603 (631)
.......||+.|||||++.+..++.++|||||||++|||+||..|+............+....+... ..++++.+++.
T Consensus 165 ~~~~~~~gt~~y~APE~~~~~~~~~~sDvwS~Gvvl~ellt~~~~~~~~~~~~~~~~~i~~~~~~~~p~~~~~~l~~li~ 244 (272)
T d1qpca_ 165 TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMR 244 (272)
T ss_dssp ECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCCCTTCCHHHHHHHH
T ss_pred ccccccCCcccccChHHHhCCCCCchhhhhhhHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCCCCcccChHHHHHHHH
Confidence 3345568999999999999899999999999999999999976665543332222222222211111 22468999999
Q ss_pred hhcCCChhhHHhHHHHHHH
Q 042825 604 KTIQLDEENLANVSTVAEL 622 (631)
Q Consensus 604 ~~L~~d~~~r~~~~~vl~l 622 (631)
+|+..||++||++.++++.
T Consensus 245 ~cl~~~P~~Rpt~~ei~~~ 263 (272)
T d1qpca_ 245 LCWKERPEDRPTFDYLRSV 263 (272)
T ss_dssp HHTCSSGGGSCCHHHHHHH
T ss_pred HHcCCCHhHCcCHHHHHHH
Confidence 9999999999999998764
|
| >d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase Itk/Tsk species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.96 E-value=7.3e-30 Score=254.88 Aligned_cols=198 Identities=22% Similarity=0.329 Sum_probs=141.7
Q ss_pred CCcccceeecCCCceEEEEEEecCCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc-------------------------
Q 042825 418 NNFSEENRLGRGGVGTVYKGELKDGTEVGVKRMELGSVTEQGIAQFESEITVLTK------------------------- 472 (631)
Q Consensus 418 ~~f~~~~~iG~G~fg~Vyk~~~~~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~------------------------- 472 (631)
++|+..+.||+|+||+||+|++.+++.||||+++..... .++|.+|++++.+
T Consensus 5 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~~~~---~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~lv~E~ 81 (263)
T d1sm2a_ 5 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMS---EEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEF 81 (263)
T ss_dssp SCEEEEEEEECCSSCCEEEEEETTTEEEEEEECCSSSSC---HHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred HHcEEEEEEeeCCCeEEEEEEECCCCEEEEEEECCCcCc---HHHHHHHHHHHHhcCCCCcccccceeccCCceEEEEEe
Confidence 468889999999999999999988999999999765433 3679999999877
Q ss_pred ---CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCCcc
Q 042825 473 ---GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENGKH 525 (631)
Q Consensus 473 ---gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~~~ 525 (631)
|+|.+++.. ....++|..+..|+.++|+| +.+||+|||+|+...... .
T Consensus 82 ~~~g~L~~~l~~----~~~~~~~~~~~~i~~qia~gl~~lH~~~iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~~-~ 156 (263)
T d1sm2a_ 82 MEHGCLSDYLRT----QRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQ-Y 156 (263)
T ss_dssp CTTCBHHHHHHT----TTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCTTCSGGGEEECGGGCEEECSCC-----------
T ss_pred cCCCcHHHHhhc----cccCCCHHHHHHHHHHHHHHHHhhhccceeecccchhheeecCCCCeEecccchheeccCCC-c
Confidence 777777642 34568999999999999987 567999999998774322 2
Q ss_pred ccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHhHhhh--cCChhHHHHHH
Q 042825 526 SILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQKMH--KNHDTFQMAID 603 (631)
Q Consensus 526 ~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~~~~~--~~~~~l~~~id 603 (631)
.......||+.|+|||++.+..|+.++|||||||++|||+|+..|+............+....+... ..++++.+++.
T Consensus 157 ~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvil~el~t~~~~~~~~~~~~~~~~~i~~~~~~~~p~~~~~~l~~li~ 236 (263)
T d1sm2a_ 157 TSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTHVYQIMN 236 (263)
T ss_dssp --------CTTSCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSCCHHHHHHHHHHTCCCCCCTTSCHHHHHHHH
T ss_pred eeecceecCcccCChHHhcCCCCCchhhhcchHHHHHHHHHCCCCCCCCCCHHHHHHHHHhcCCCCCccccCHHHHHHHH
Confidence 2234467999999999999999999999999999999999965444333222211222222111111 12468999999
Q ss_pred hhcCCChhhHHhHHHHHHHH
Q 042825 604 KTIQLDEENLANVSTVAELG 623 (631)
Q Consensus 604 ~~L~~d~~~r~~~~~vl~la 623 (631)
+|+..||++||++.++++.-
T Consensus 237 ~cl~~~p~~Rps~~~il~~L 256 (263)
T d1sm2a_ 237 HCWKERPEDRPAFSRLLRQL 256 (263)
T ss_dssp HHTCSSGGGSCCHHHHHHHH
T ss_pred HHccCCHhHCcCHHHHHHHH
Confidence 99999999999999988753
|
| >d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell cycle checkpoint kinase chk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.96 E-value=4.7e-30 Score=256.88 Aligned_cols=199 Identities=19% Similarity=0.275 Sum_probs=150.9
Q ss_pred cCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc-----------------------
Q 042825 417 TNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK----------------------- 472 (631)
Q Consensus 417 t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~----------------------- 472 (631)
.++|+..+.||+|+||+||+|+.+ +|+.||||++...... ...+++.+|++++++
T Consensus 4 ~~dy~~~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~-~~~~~~~~Ei~~l~~l~HpnIv~~~~~~~~~~~~~ivm 82 (271)
T d1nvra_ 4 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV-DCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFL 82 (271)
T ss_dssp TTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC--------CHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred CcceEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcc-hHHHHHHHHHHHHHhCCCCCEeeEeeeeccCceeEEEE
Confidence 457999999999999999999975 6999999999765322 244678999999977
Q ss_pred -----CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCC
Q 042825 473 -----GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENG 523 (631)
Q Consensus 473 -----gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~ 523 (631)
|+|.+++. ....+++.....++.+++.| +.+||+|||+|+.+....
T Consensus 83 Ey~~gg~L~~~l~-----~~~~l~e~~~~~i~~qi~~al~ylH~~~IiHrDiKp~NILl~~~~~~KL~DFG~a~~~~~~~ 157 (271)
T d1nvra_ 83 EYCSGGELFDRIE-----PDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNN 157 (271)
T ss_dssp ECCTTEEGGGGSB-----TTTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEECEETT
T ss_pred eccCCCcHHHHHh-----cCCCCCHHHHHHHHHHHHHHHHHHHHcCCccCcccHHHEEECCCCCEEEccchhheeeccCC
Confidence 56766663 23468899999999998877 578999999999875443
Q ss_pred ccccccccccCcccccccccccCCC-CchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHh---HhhhcCChhHH
Q 042825 524 KHSILTKVAGTFGYLAPEYIVTGRI-TAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWF---QKMHKNHDTFQ 599 (631)
Q Consensus 524 ~~~~~~~~~gt~~Y~aPE~~~~~~~-~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~---~~~~~~~~~l~ 599 (631)
........+||+.|||||++.+..+ +.++||||+||++|||+||+.||+................ ......++++.
T Consensus 158 ~~~~~~~~~GT~~Y~APE~~~~~~~~~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~ 237 (271)
T d1nvra_ 158 RERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPL 237 (271)
T ss_dssp EECCBCCCCSCGGGSCTHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSSTTSHHHHHHHTTCTTSTTGGGSCHHHH
T ss_pred ccccccceeeCcCccCHhHhcCCCCCCCceeeeHhHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCccccCCHHHH
Confidence 3344566789999999999988876 5789999999999999999999986544332222221111 11122357889
Q ss_pred HHHHhhcCCChhhHHhHHHHHH
Q 042825 600 MAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 600 ~~id~~L~~d~~~r~~~~~vl~ 621 (631)
+++.+||..||.+|+++.++++
T Consensus 238 ~li~~~L~~dP~~R~t~~eil~ 259 (271)
T d1nvra_ 238 ALLHKILVENPSARITIPDIKK 259 (271)
T ss_dssp HHHHHHSCSSTTTSCCHHHHTT
T ss_pred HHHHHHcCCChhHCcCHHHHhc
Confidence 9999999999999999998764
|
| >d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Musk tyrosine kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.96 E-value=2e-29 Score=256.86 Aligned_cols=213 Identities=21% Similarity=0.250 Sum_probs=158.3
Q ss_pred HHHHhhcCCcccceeecCCCceEEEEEEec------CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc------------
Q 042825 411 QVLRNATNNFSEENRLGRGGVGTVYKGELK------DGTEVGVKRMELGSVTEQGIAQFESEITVLTK------------ 472 (631)
Q Consensus 411 ~~l~~~t~~f~~~~~iG~G~fg~Vyk~~~~------~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~------------ 472 (631)
.+++-..++|+..+.||+|+||+||+|+++ +++.||||++.... .....++|.+|++++++
T Consensus 6 ~~~e~p~~~~~~~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~~-~~~~~~~~~~E~~il~~l~h~niv~~~~~ 84 (301)
T d1lufa_ 6 LSLEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEA-SADMQADFQREAALMAEFDNPNIVKLLGV 84 (301)
T ss_dssp HHTBCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTC-CHHHHHHHHHHHHHHHTCCCTTBCCEEEE
T ss_pred hhccCCHHHcEEeEEEeeCCCeEEEEEEECCCccCCCCeEEEEEEEChhc-ChHHHHHHHHHHHHHHhcCCCCcccceee
Confidence 345556778999999999999999999864 35789999997543 44567789999999987
Q ss_pred ----------------CChhHHhHhhh-------------------hcCCCCCCHHHHHHHHHHhhcC------------
Q 042825 473 ----------------GTLGRHLFNWE-------------------EEGLEPLEWNTRLNIALDVARG------------ 505 (631)
Q Consensus 473 ----------------gsL~~~L~~~~-------------------~~~~~~L~~~~~~~I~~~ia~g------------ 505 (631)
|+|.++++... ......++|.+++.|+.++|.|
T Consensus 85 ~~~~~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~ylH~~~ivHr 164 (301)
T d1lufa_ 85 CAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHR 164 (301)
T ss_dssp ECSSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCS
T ss_pred eccCCceEEEEEecCCCcHHHHHHhcCccccccccccccchhhhccccCCCCCCHHHHHHHHHHHHHHhhhcccCCeEee
Confidence 78888876421 1123468999999999999987
Q ss_pred ------------CCcEEEeeccccccCCCCccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCC-CCCC
Q 042825 506 ------------DDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGR-KVVD 572 (631)
Q Consensus 506 ------------~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~-~P~~ 572 (631)
+.+||+|||+|+.+.........+...||+.|+|||++.+..|+.++|||||||++|||++|. .||.
T Consensus 165 DlKp~NILld~~~~~Kl~DFGls~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~t~ksDVwS~Gvvl~ell~~~~~p~~ 244 (301)
T d1lufa_ 165 DLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYY 244 (301)
T ss_dssp CCSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTT
T ss_pred EEcccceEECCCCcEEEccchhheeccCCccccccCCCCcCcCcCCHHHHccCCCChhhhhccchhhHHHHHccCCCCCC
Confidence 467999999998775333333445678999999999999999999999999999999999986 5676
Q ss_pred CCCCChHHHHHHHHHhHh--hhcCChhHHHHHHhhcCCChhhHHhHHHHHHHHHh
Q 042825 573 ATHSDPEYIIHLATWFQK--MHKNHDTFQMAIDKTIQLDEENLANVSTVAELGDH 625 (631)
Q Consensus 573 ~~~~~~~~~~~l~~~~~~--~~~~~~~l~~~id~~L~~d~~~r~~~~~vl~lal~ 625 (631)
+.... +....+...... ....++++.+++..|+..+|.+||++.++++.--+
T Consensus 245 ~~~~~-e~~~~v~~~~~~~~p~~~~~~~~~li~~cl~~~P~~RPt~~ev~~~L~~ 298 (301)
T d1lufa_ 245 GMAHE-EVIYYVRDGNILACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQR 298 (301)
T ss_dssp TSCHH-HHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred CCCHH-HHHHHHHcCCCCCCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHH
Confidence 54322 111122211111 11234689999999999999999999999876543
|
| >d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Aurora-related kinase 1 (aurora-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.96 E-value=1.1e-29 Score=253.32 Aligned_cols=193 Identities=21% Similarity=0.319 Sum_probs=149.8
Q ss_pred CCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCC-HHHHHHHHHHHHHHhc-----------------------
Q 042825 418 NNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVT-EQGIAQFESEITVLTK----------------------- 472 (631)
Q Consensus 418 ~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~-~~~~~~~~~Ei~~l~~----------------------- 472 (631)
++|+..+.||+|+||+||+|+.+ +|+.||||++...... ....+.+.+|++++++
T Consensus 6 ~dy~i~~~iG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~ivm 85 (263)
T d2j4za1 6 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLIL 85 (263)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hHeEEEEEEecCCCcEEEEEEECCCCcEEEEEEEchHHccChHHHHHHHHHHHHHHhcCCCCCCeEEEEEEECCEEEEEE
Confidence 57899999999999999999976 5899999999753221 1234678999999986
Q ss_pred -----CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCC
Q 042825 473 -----GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENG 523 (631)
Q Consensus 473 -----gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~ 523 (631)
|+|.+++.. ...+++.....++.+++.| +.+||+|||+|+.....
T Consensus 86 Ey~~~g~L~~~l~~-----~~~l~e~~~~~i~~qi~~al~~lH~~~ivHrDiKp~Nill~~~~~~kl~DFG~a~~~~~~- 159 (263)
T d2j4za1 86 EYAPLGTVYRELQK-----LSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS- 159 (263)
T ss_dssp ECCTTCBHHHHHHH-----HSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCCSCSCCCCC-
T ss_pred eecCCCcHHHHHhh-----cCCCCHHHHHHHHHHHHHHHHHHHHCCeeeeeeccccceecCCCCEeecccceeeecCCC-
Confidence 777777753 2358888888898888877 56899999999876422
Q ss_pred ccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHhHhh--hcCChhHHHH
Q 042825 524 KHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQKM--HKNHDTFQMA 601 (631)
Q Consensus 524 ~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~~~~--~~~~~~l~~~ 601 (631)
......||+.|||||++.+..|+.++|||||||++|||+||+.||.+.... ............ ...++++.++
T Consensus 160 ---~~~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~--~~~~~i~~~~~~~p~~~s~~~~~l 234 (263)
T d2j4za1 160 ---RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ--ETYKRISRVEFTFPDFVTEGARDL 234 (263)
T ss_dssp ---CCEETTEEGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHH--HHHHHHHTTCCCCCTTSCHHHHHH
T ss_pred ---cccccCCCCcccCHHHHcCCCCCchhhhhhHhHHHHHHhcCCCCCCCCCHH--HHHHHHHcCCCCCCccCCHHHHHH
Confidence 234568999999999999999999999999999999999999999864322 111111111111 1135789999
Q ss_pred HHhhcCCChhhHHhHHHHHH
Q 042825 602 IDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 602 id~~L~~d~~~r~~~~~vl~ 621 (631)
+.+||..||.+|+++.++++
T Consensus 235 i~~~L~~dp~~R~t~~eil~ 254 (263)
T d2j4za1 235 ISRLLKHNPSQRPMLREVLE 254 (263)
T ss_dssp HHHHTCSSGGGSCCHHHHHT
T ss_pred HHHHccCCHhHCcCHHHHHc
Confidence 99999999999999999875
|
| >d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Bruton's tyrosine kinase (Btk) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.96 E-value=3.5e-29 Score=248.89 Aligned_cols=196 Identities=19% Similarity=0.303 Sum_probs=152.9
Q ss_pred CCcccceeecCCCceEEEEEEecCCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc-------------------------
Q 042825 418 NNFSEENRLGRGGVGTVYKGELKDGTEVGVKRMELGSVTEQGIAQFESEITVLTK------------------------- 472 (631)
Q Consensus 418 ~~f~~~~~iG~G~fg~Vyk~~~~~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~------------------------- 472 (631)
++|+..+.||+|+||+||+|++++++.||||+++..... .++|.+|++++.+
T Consensus 4 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~~~---~~~~~~Ev~~~~~l~HpnIv~~~g~~~~~~~~~iv~Ey 80 (258)
T d1k2pa_ 4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMS---EDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEY 80 (258)
T ss_dssp CCCCCCCCCCEETTEEEEEEEETTTEEEEEEEEESSSSC---HHHHHHHHHHHHTCCCTTBCCEEEEECCSSSEEEEEEC
T ss_pred HHCEEeEEEecCCCeEEEEEEECCCCEEEEEEECcCcCC---HHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEc
Confidence 578889999999999999999988999999999876543 3679999999987
Q ss_pred ---CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCCcc
Q 042825 473 ---GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENGKH 525 (631)
Q Consensus 473 ---gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~~~ 525 (631)
|++..++. .....+.+..+.+++.++|+| +.+||+|||+++...... .
T Consensus 81 ~~~g~l~~~~~----~~~~~~~~~~~~~i~~qi~~gl~~LH~~~iiH~dlk~~Nill~~~~~~kl~DfG~a~~~~~~~-~ 155 (258)
T d1k2pa_ 81 MANGCLLNYLR----EMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE-Y 155 (258)
T ss_dssp CTTEEHHHHHH----SGGGCCCHHHHHHHHHHHHHHHHHHHHTTBCCSCCSGGGEEECTTCCEEECCCSSCCBCSSSS-C
T ss_pred cCCCcHHHhhh----ccccCCcHHHHHHHHHHHHHHHHHHhhcCcccccccceeEEEcCCCcEEECcchhheeccCCC-c
Confidence 44554443 233568999999999999988 567899999998775332 2
Q ss_pred ccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChHHHHHHHHHhHhh--hcCChhHHHHH
Q 042825 526 SILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT-GRKVVDATHSDPEYIIHLATWFQKM--HKNHDTFQMAI 602 (631)
Q Consensus 526 ~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~Ellt-G~~P~~~~~~~~~~~~~l~~~~~~~--~~~~~~l~~~i 602 (631)
.......||+.|+|||.+....++.|+|||||||++|||+| |+.||.+....+ ....+....+.. ...++++.+++
T Consensus 156 ~~~~~~~~t~~y~aPE~~~~~~~~~ksDiwS~G~~l~el~t~g~~Pf~~~~~~~-~~~~i~~~~~~~~p~~~~~~l~~li 234 (258)
T d1k2pa_ 156 TSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSE-TAEHIAQGLRLYRPHLASEKVYTIM 234 (258)
T ss_dssp CCCCCSCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCHHH-HHHHHHTTCCCCCCTTCCHHHHHHH
T ss_pred eeecccCCCCCcCCcHHhcCCCCCcceeecccchhhHhHHhcCCCCCCCCCHHH-HHHHHHhCCCCCCcccccHHHHHHH
Confidence 23345679999999999999999999999999999999998 899998664321 111222211111 11246899999
Q ss_pred HhhcCCChhhHHhHHHHHHH
Q 042825 603 DKTIQLDEENLANVSTVAEL 622 (631)
Q Consensus 603 d~~L~~d~~~r~~~~~vl~l 622 (631)
.+|+..||++||++.++++.
T Consensus 235 ~~cl~~dP~~RPt~~eil~~ 254 (258)
T d1k2pa_ 235 YSCWHEKADERPTFKILLSN 254 (258)
T ss_dssp HHTTCSSGGGSCCHHHHHHH
T ss_pred HHHccCCHhHCcCHHHHHHH
Confidence 99999999999999998875
|
| >d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: pak1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.96 E-value=7.7e-29 Score=250.77 Aligned_cols=194 Identities=19% Similarity=0.334 Sum_probs=149.9
Q ss_pred CCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc------------------------
Q 042825 418 NNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK------------------------ 472 (631)
Q Consensus 418 ~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~------------------------ 472 (631)
++|+..+.||+|+||+||+|+.. +|+.||||++...... ..+.+.+|++++++
T Consensus 20 ~~Y~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~~~~~~~~--~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmE 97 (293)
T d1yhwa1 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQP--KKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVME 97 (293)
T ss_dssp TTBCSCEECCCSSSCEEEEEEBTTTCCEEEEEEEEGGGCS--CHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred cccEEEEEEecCcCcEEEEEEECCCCCEEEEEEEecccCh--HHHHHHHHHHHHHhCCCCCEeeEeEEEEECCEEEEEEE
Confidence 47999999999999999999965 6999999999765432 34679999999876
Q ss_pred ----CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCCc
Q 042825 473 ----GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENGK 524 (631)
Q Consensus 473 ----gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~~ 524 (631)
|+|.+++.. ..++......++.+++.| +.+||+|||+|+.+....
T Consensus 98 y~~gg~L~~~~~~------~~l~~~~~~~i~~qi~~aL~yLH~~~iiHrDiKp~NILl~~~~~vkl~DFG~a~~~~~~~- 170 (293)
T d1yhwa1 98 YLAGGSLTDVVTE------TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ- 170 (293)
T ss_dssp CCTTCBHHHHHHH------SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSTT-
T ss_pred ecCCCcHHHHhhc------cCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCcHHHeEECCCCcEeeccchhheeecccc-
Confidence 677665532 358888888898888877 578999999999874322
Q ss_pred cccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHh---HhhhcCChhHHHH
Q 042825 525 HSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWF---QKMHKNHDTFQMA 601 (631)
Q Consensus 525 ~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~---~~~~~~~~~l~~~ 601 (631)
......+||+.|||||++.+..|+.++||||+||++|||+||+.||.+............... ......+++++++
T Consensus 171 -~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l 249 (293)
T d1yhwa1 171 -SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDF 249 (293)
T ss_dssp -CCBCCCCSCGGGCCHHHHSSSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHHCSCCCSSGGGSCHHHHHH
T ss_pred -ccccccccCCCccChhhhcCCCCCchhceehHhHHHHHHhhCCCCCCCCCHHHHHHHHHhCCCCCCCCcccCCHHHHHH
Confidence 234567899999999999999999999999999999999999999976432211111111110 1111235789999
Q ss_pred HHhhcCCChhhHHhHHHHHH
Q 042825 602 IDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 602 id~~L~~d~~~r~~~~~vl~ 621 (631)
|.+||..||.+|+++.++++
T Consensus 250 i~~~L~~dP~~R~s~~eil~ 269 (293)
T d1yhwa1 250 LNRCLDMDVEKRGSAKELLQ 269 (293)
T ss_dssp HHHHTCSSTTTSCCHHHHTT
T ss_pred HHHHccCChhHCcCHHHHhc
Confidence 99999999999999998865
|
| >d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase wnk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.95 E-value=9.6e-29 Score=247.29 Aligned_cols=191 Identities=20% Similarity=0.320 Sum_probs=146.9
Q ss_pred ccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc---------------------------
Q 042825 421 SEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK--------------------------- 472 (631)
Q Consensus 421 ~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~--------------------------- 472 (631)
+..+.||+|+||+||+|+.. +++.||||++..........++|.+|+++|++
T Consensus 12 ~~~~~iG~G~fg~Vy~~~~~~~~~~va~K~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~~~ivm 91 (270)
T d1t4ha_ 12 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT 91 (270)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEEE
T ss_pred EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEeeccccCCEEEEEE
Confidence 45568999999999999976 58899999998776666677889999999987
Q ss_pred -----CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC---------------------------CCcEEEeeccccccC
Q 042825 473 -----GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG---------------------------DDMRVADFGLVRLVP 520 (631)
Q Consensus 473 -----gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g---------------------------~~~kl~DFGla~~~~ 520 (631)
|+|.+++.. ...+++.....++.++++| +.+||+|||+|+...
T Consensus 92 E~~~~g~L~~~l~~-----~~~~~~~~~~~~~~qi~~gl~yLH~~~~~IiHrDiKp~NILl~~~~~~~Kl~DFGla~~~~ 166 (270)
T d1t4ha_ 92 ELMTSGTLKTYLKR-----FKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKR 166 (270)
T ss_dssp ECCCSCBHHHHHHH-----HSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCC
T ss_pred eCCCCCcHHHHHhc-----cccccHHHHHHHHHHHHHHHHHHHHCCCCEEeCCcChhhceeeCCCCCEEEeecCcceecc
Confidence 566666643 2357888888888887766 457999999998753
Q ss_pred CCCccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHhH---hhhcCChh
Q 042825 521 ENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQ---KMHKNHDT 597 (631)
Q Consensus 521 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~~---~~~~~~~~ 597 (631)
.. .....+||+.|||||++.+ +|+.++|||||||++|||+||+.||............+..... .....+++
T Consensus 167 ~~----~~~~~~GT~~Y~aPE~~~~-~~~~~~DIwSlGvilyel~~g~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 241 (270)
T d1t4ha_ 167 AS----FAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPE 241 (270)
T ss_dssp TT----SBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCCGGGGGCCCHH
T ss_pred CC----ccCCcccCccccCHHHhCC-CCCCcCchhhHHHHHHHHHHCCCCCCCcccHHHHHHHHHcCCCCcccCccCCHH
Confidence 21 2345789999999998864 6999999999999999999999999765433222222221111 11123568
Q ss_pred HHHHHHhhcCCChhhHHhHHHHHH
Q 042825 598 FQMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 598 l~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
+.+++.+||..||++|+++.++++
T Consensus 242 ~~~li~~~l~~dp~~R~s~~ell~ 265 (270)
T d1t4ha_ 242 VKEIIEGCIRQNKDERYSIKDLLN 265 (270)
T ss_dssp HHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HHHHHHHHccCCHhHCcCHHHHhC
Confidence 999999999999999999998875
|
| >d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Abelsone tyrosine kinase (abl) species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.95 E-value=3.5e-29 Score=253.01 Aligned_cols=200 Identities=20% Similarity=0.279 Sum_probs=153.4
Q ss_pred hcCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc----------------------
Q 042825 416 ATNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK---------------------- 472 (631)
Q Consensus 416 ~t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~---------------------- 472 (631)
..++|+..+.||+|+||+||+|+++ +|+.||||+++.... ..++|.+|+++|.+
T Consensus 15 ~~~~~~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~---~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~iv 91 (287)
T d1opja_ 15 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM---EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 91 (287)
T ss_dssp CGGGEEEEEETTTTTTSSEEEEEEGGGTEEEEEEECCTTCS---CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEE
T ss_pred cHHHeEEeeEEeeCCCeEEEEEEECCCCeEEEEEEECCccc---hHHHHHHHHHHHHhCCCCCEecCCccEeeCCeeEEE
Confidence 3467888999999999999999976 588999999976543 34679999999977
Q ss_pred ------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCC
Q 042825 473 ------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPEN 522 (631)
Q Consensus 473 ------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~ 522 (631)
|++.+++.. .....++|..+..|+.++|+| +.+||+|||+|+.....
T Consensus 92 ~E~~~~g~l~~~l~~---~~~~~~~~~~~~~i~~qi~~gL~yLH~~~iiHrDlKp~NILl~~~~~~Kl~DFG~a~~~~~~ 168 (287)
T d1opja_ 92 TEFMTYGNLLDYLRE---CNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD 168 (287)
T ss_dssp EECCTTCBHHHHHHH---SCTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCCCTTTCCSS
T ss_pred eecccCcchHHHhhh---ccccchHHHHHHHHHHHHHHHHHHHHHCCcccCccccCeEEECCCCcEEEccccceeecCCC
Confidence 777777743 344678999999999999988 56799999999987532
Q ss_pred CccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHhH--hhhcCChhHHH
Q 042825 523 GKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQ--KMHKNHDTFQM 600 (631)
Q Consensus 523 ~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~~--~~~~~~~~l~~ 600 (631)
.........||+.|+|||++.+..|+.|+|||||||++|||++|+.|+............+..-.+ .....++++.+
T Consensus 169 -~~~~~~~~~g~~~y~aPE~~~~~~~~~k~DiwS~Gv~l~ell~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~ 247 (287)
T d1opja_ 169 -TYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYE 247 (287)
T ss_dssp -SSEEETTEEECGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTCCCCCCTTCCHHHHH
T ss_pred -CceeeccccccccccChHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCcchHHHHHHHHhcCCCCCCCccchHHHHH
Confidence 223344557899999999999999999999999999999999987776543322111111111111 01123468999
Q ss_pred HHHhhcCCChhhHHhHHHHHHH
Q 042825 601 AIDKTIQLDEENLANVSTVAEL 622 (631)
Q Consensus 601 ~id~~L~~d~~~r~~~~~vl~l 622 (631)
++.+|+..||.+||++.++++.
T Consensus 248 li~~cl~~dP~~Rps~~ei~~~ 269 (287)
T d1opja_ 248 LMRACWQWNPSDRPSFAEIHQA 269 (287)
T ss_dssp HHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHHcCCCHhHCcCHHHHHHH
Confidence 9999999999999999998774
|
| >d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: 3-phosphoinositide dependent protein kinase-1 Pdk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.95 E-value=8.3e-30 Score=257.41 Aligned_cols=198 Identities=17% Similarity=0.264 Sum_probs=146.4
Q ss_pred CCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCC-CHHHHHHHHHHHHHHhc-----------------------
Q 042825 418 NNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSV-TEQGIAQFESEITVLTK----------------------- 472 (631)
Q Consensus 418 ~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~-~~~~~~~~~~Ei~~l~~----------------------- 472 (631)
++|+..+.||+|+||+||+|+.. +|+.||||++..... .....+.+.+|++++++
T Consensus 8 ~dy~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ivm 87 (288)
T d1uu3a_ 8 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL 87 (288)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCSTTBCCEEEEEECSSEEEEEE
T ss_pred CCCEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccCHHHHHHHHHHHHHHHHcCCCCeeEEEEEEEECCEEEEEE
Confidence 57999999999999999999975 699999999975321 11234678999999876
Q ss_pred -----CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCC
Q 042825 473 -----GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENG 523 (631)
Q Consensus 473 -----gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~ 523 (631)
|+|.+++.. ...+++.....++.+++.| +.+||+|||+|+.+....
T Consensus 88 Ey~~gg~L~~~~~~-----~~~l~e~~~~~~~~qi~~al~ylH~~~iiHrDiKp~NIll~~~~~vkl~DFG~a~~~~~~~ 162 (288)
T d1uu3a_ 88 SYAKNGELLKYIRK-----IGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 162 (288)
T ss_dssp CCCTTEEHHHHHHH-----HSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECC---
T ss_pred EccCCCCHHHhhhc-----cCCCCHHHHHHHHHHHHHHHHhhccccEEcCcCCccccccCCCceEEecccccceecccCC
Confidence 566666542 2357888888888888776 568999999999875333
Q ss_pred ccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHh-HhhhcCChhHHHHH
Q 042825 524 KHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWF-QKMHKNHDTFQMAI 602 (631)
Q Consensus 524 ~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~-~~~~~~~~~l~~~i 602 (631)
........+||+.|||||++.+..|+.++||||+||++|||+||+.||.+..... ....+...- ......+++++++|
T Consensus 163 ~~~~~~~~~GT~~Y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~-~~~~i~~~~~~~p~~~s~~~~~li 241 (288)
T d1uu3a_ 163 KQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYL-IFQKIIKLEYDFPEKFFPKARDLV 241 (288)
T ss_dssp -------CCCCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHTTCCCCCTTCCHHHHHHH
T ss_pred cccccccccCCccccCceeeccCCCCcccceehhhHHHHHHhhCCCCCCCcCHHH-HHHHHHcCCCCCCccCCHHHHHHH
Confidence 3334456789999999999999999999999999999999999999998653221 111121111 11122357899999
Q ss_pred HhhcCCChhhHHhHHHHHH
Q 042825 603 DKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 603 d~~L~~d~~~r~~~~~vl~ 621 (631)
.+||..||.+|+++.++++
T Consensus 242 ~~~L~~dP~~R~t~~e~~~ 260 (288)
T d1uu3a_ 242 EKLLVLDATKRLGCEEMEG 260 (288)
T ss_dssp HTTSCSSGGGSTTSGGGTC
T ss_pred HHHccCCHhHCcCHHHHcC
Confidence 9999999999999887643
|
| >d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase ZAP-70 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.95 E-value=1.2e-28 Score=248.54 Aligned_cols=204 Identities=18% Similarity=0.298 Sum_probs=154.4
Q ss_pred CCccccee-ecCCCceEEEEEEec---CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc---------------------
Q 042825 418 NNFSEENR-LGRGGVGTVYKGELK---DGTEVGVKRMELGSVTEQGIAQFESEITVLTK--------------------- 472 (631)
Q Consensus 418 ~~f~~~~~-iG~G~fg~Vyk~~~~---~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~--------------------- 472 (631)
++|...+. ||+|+||+||+|.++ ++..||||+++... .....++|.+|+++|.+
T Consensus 8 ~~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vAvK~l~~~~-~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~~~~~lv 86 (285)
T d1u59a_ 8 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGT-EKADTEEMMREAQIMHQLDNPYIVRLIGVCQAEALMLV 86 (285)
T ss_dssp GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSC-CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEESSSEEEE
T ss_pred cCeEECCcEEecccCeEEEEEEEecCCCcEEEEEEEEChhc-CHHHHHHHHHHHHHHHhCCCCCEeeEeeeeccCeEEEE
Confidence 45666664 999999999999864 35689999997643 45567889999999987
Q ss_pred ------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCC
Q 042825 473 ------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPEN 522 (631)
Q Consensus 473 ------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~ 522 (631)
|+|.+++. .....+++..+.+|+.++|+| +.+||+|||+|+.+...
T Consensus 87 mE~~~~g~L~~~l~----~~~~~l~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~ 162 (285)
T d1u59a_ 87 MEMAGGGPLHKFLV----GKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGAD 162 (285)
T ss_dssp EECCTTEEHHHHHT----TCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEEETTEEEECCCTTCEECTTC
T ss_pred EEeCCCCcHHHHhh----ccccCCCHHHHHHHHHHHHHHHHHHHhCCeecCcCchhheeeccCCceeeccchhhhccccc
Confidence 56666553 234568999999999999988 45789999999987533
Q ss_pred Ccc-ccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChHHHHHHHHHhH--hhhcCChhH
Q 042825 523 GKH-SILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT-GRKVVDATHSDPEYIIHLATWFQ--KMHKNHDTF 598 (631)
Q Consensus 523 ~~~-~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~Ellt-G~~P~~~~~~~~~~~~~l~~~~~--~~~~~~~~l 598 (631)
... .......||+.|||||++.+..++.++|||||||++|||+| |+.||.+.... +....+..-.+ .....++++
T Consensus 163 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwS~Gv~l~E~lt~G~~Pf~~~~~~-~~~~~i~~~~~~~~p~~~~~~l 241 (285)
T d1u59a_ 163 DSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGP-EVMAFIEQGKRMECPPECPPEL 241 (285)
T ss_dssp SCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTH-HHHHHHHTTCCCCCCTTCCHHH
T ss_pred ccccccccccccCccccChHHHhCCCCCccchhhcchHHHHHHHhCCCCCCCCCCHH-HHHHHHHcCCCCCCCCcCCHHH
Confidence 222 22344678999999999999999999999999999999998 99999875432 12222221111 111234689
Q ss_pred HHHHHhhcCCChhhHHhHHHHHHHHHhhh
Q 042825 599 QMAIDKTIQLDEENLANVSTVAELGDHCC 627 (631)
Q Consensus 599 ~~~id~~L~~d~~~r~~~~~vl~lal~C~ 627 (631)
.+++.+|+..||++||++.++.+....|.
T Consensus 242 ~~li~~cl~~~p~~RPs~~~i~~~L~~~~ 270 (285)
T d1u59a_ 242 YALMSDCWIYKWEDRPDFLTVEQRMRACY 270 (285)
T ss_dssp HHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCHhHCcCHHHHHHHHHHHH
Confidence 99999999999999999999887655553
|
| >d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: ephb2 receptor tyrosine kinase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.95 E-value=4.5e-29 Score=253.70 Aligned_cols=200 Identities=21% Similarity=0.294 Sum_probs=140.7
Q ss_pred CCcccceeecCCCceEEEEEEecC-C---cEEEEEEEecCCCCHHHHHHHHHHHHHHhc---------------------
Q 042825 418 NNFSEENRLGRGGVGTVYKGELKD-G---TEVGVKRMELGSVTEQGIAQFESEITVLTK--------------------- 472 (631)
Q Consensus 418 ~~f~~~~~iG~G~fg~Vyk~~~~~-g---~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~--------------------- 472 (631)
++|+..++||+|+||+||+|+++. + ..||||++.... .....++|.+|+++|.+
T Consensus 26 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~i 104 (299)
T d1jpaa_ 26 SCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGY-TEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMI 104 (299)
T ss_dssp GGEEEEEEEEECSSSEEEEEEECC---CCEEEEEEECCSSC-CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEE
T ss_pred hhcEEeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEECccc-CHHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEE
Confidence 345567899999999999999753 3 368999886543 45567889999999987
Q ss_pred -------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCC
Q 042825 473 -------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPE 521 (631)
Q Consensus 473 -------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~ 521 (631)
|+|.+++. .....++|.++..|+.++|+| +.+||+|||+|+.+..
T Consensus 105 v~Ey~~~g~L~~~~~----~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHrDlKp~NILl~~~~~~Kl~DFGla~~~~~ 180 (299)
T d1jpaa_ 105 ITEFMENGSLDSFLR----QNDGQFTVIQLVGMLRGIAAGMKYLADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLED 180 (299)
T ss_dssp EEECCTTEEHHHHHH----TTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCC--------
T ss_pred EEEecCCCcceeeec----cccCCCCHHHHHHHHHHHHHHHHHHhhCCCccCccccceEEECCCCcEEECCcccceEccC
Confidence 56666553 233468999999999999988 5689999999998753
Q ss_pred CCccc---cccccccCcccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChHHHHHHHHHhHh------h
Q 042825 522 NGKHS---ILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT-GRKVVDATHSDPEYIIHLATWFQK------M 591 (631)
Q Consensus 522 ~~~~~---~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~Ellt-G~~P~~~~~~~~~~~~~l~~~~~~------~ 591 (631)
..... ......||+.|||||++.+..|+.++|||||||++|||+| |+.||.+.... . +...+.. .
T Consensus 181 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~sDvwS~Gvvl~el~t~g~~Pf~~~~~~--~---~~~~i~~~~~~~~~ 255 (299)
T d1jpaa_ 181 DTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQ--D---VINAIEQDYRLPPP 255 (299)
T ss_dssp ---------------CGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH--H---HHHHHHTTCCCCCC
T ss_pred CCCcceeeecccccCCccccCHHHHhcCCCCcccccccchHHHHHHHhCCCCCCCCCCHH--H---HHHHHHcCCCCCCC
Confidence 22211 1223568999999999999999999999999999999998 89999865322 1 2222211 1
Q ss_pred hcCChhHHHHHHhhcCCChhhHHhHHHHHHHHHhhh
Q 042825 592 HKNHDTFQMAIDKTIQLDEENLANVSTVAELGDHCC 627 (631)
Q Consensus 592 ~~~~~~l~~~id~~L~~d~~~r~~~~~vl~lal~C~ 627 (631)
...++++.+++.+|+..||.+||++.++++..-...
T Consensus 256 ~~~~~~l~~li~~cl~~~P~~RPs~~ei~~~L~~~l 291 (299)
T d1jpaa_ 256 MDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKMI 291 (299)
T ss_dssp TTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHH
T ss_pred ccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHh
Confidence 123468999999999999999999999987644443
|
| >d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fl cytokine receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.95 E-value=9.2e-29 Score=254.57 Aligned_cols=208 Identities=22% Similarity=0.357 Sum_probs=153.5
Q ss_pred cCCcccceeecCCCceEEEEEEecC------CcEEEEEEEecCCCCHHHHHHHHHHHHHHhc------------------
Q 042825 417 TNNFSEENRLGRGGVGTVYKGELKD------GTEVGVKRMELGSVTEQGIAQFESEITVLTK------------------ 472 (631)
Q Consensus 417 t~~f~~~~~iG~G~fg~Vyk~~~~~------g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~------------------ 472 (631)
.++|+..++||+|+||+||+|++.. ...||||++.... .......|.+|+.+|.+
T Consensus 36 ~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~ 114 (325)
T d1rjba_ 36 RENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKA-DSSEREALMSELKMMTQLGSHENIVNLLGACTLSG 114 (325)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC-------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred HHHeEEeeEEeeCCCeEEEEEEEcCCCcccceeEEEEEEecccc-CHHHHHHHHHHHHHHHHhcCCCcEeEEEEEEeeCC
Confidence 3578899999999999999998653 2369999986543 23345678899888764
Q ss_pred -----------CChhHHhHhhhh------------------cCCCCCCHHHHHHHHHHhhcC------------------
Q 042825 473 -----------GTLGRHLFNWEE------------------EGLEPLEWNTRLNIALDVARG------------------ 505 (631)
Q Consensus 473 -----------gsL~~~L~~~~~------------------~~~~~L~~~~~~~I~~~ia~g------------------ 505 (631)
|+|.++++.... .....++|..++.|+.++++|
T Consensus 115 ~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~IiHRDlKp~N 194 (325)
T d1rjba_ 115 PIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARN 194 (325)
T ss_dssp SCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTTEEETTCSGGG
T ss_pred eEEEEEEcCCCCcHHHHHHhccCCCcchhhhhccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCchhc
Confidence 788888864211 112468999999999999987
Q ss_pred ------CCcEEEeeccccccCCCCccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCh
Q 042825 506 ------DDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT-GRKVVDATHSDP 578 (631)
Q Consensus 506 ------~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~Ellt-G~~P~~~~~~~~ 578 (631)
+.+||+|||+|+...............||+.|||||++.+..|+.++|||||||++|||+| |+.||.+.....
T Consensus 195 ill~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DiwS~Gvil~emlt~g~~Pf~~~~~~~ 274 (325)
T d1rjba_ 195 VLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDA 274 (325)
T ss_dssp EEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSH
T ss_pred cccccCCeEEEeeccccccccCCCceeeeccccCCCccCChHHHcCCCCCcceeccchhHHHHHHHhCCCCCCCCCCHHH
Confidence 4579999999998754433334455678999999999999999999999999999999998 899998765553
Q ss_pred HHHHHHHHHhH--hhhcCChhHHHHHHhhcCCChhhHHhHHHHHHHHHhh
Q 042825 579 EYIIHLATWFQ--KMHKNHDTFQMAIDKTIQLDEENLANVSTVAELGDHC 626 (631)
Q Consensus 579 ~~~~~l~~~~~--~~~~~~~~l~~~id~~L~~d~~~r~~~~~vl~lal~C 626 (631)
.....+..-.+ .....++++.+++.+|+..||.+||++.++++. |.|
T Consensus 275 ~~~~~~~~~~~~~~p~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~-L~~ 323 (325)
T d1rjba_ 275 NFYKLIQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSF-LGC 323 (325)
T ss_dssp HHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH-HHH
T ss_pred HHHHHHhcCCCCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHH-HhC
Confidence 22222221111 111235789999999999999999999999874 555
|
| >d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: epha2 receptor tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.95 E-value=2.1e-28 Score=246.87 Aligned_cols=204 Identities=22% Similarity=0.309 Sum_probs=141.8
Q ss_pred CCcccceeecCCCceEEEEEEecCC-----cEEEEEEEecCCCCHHHHHHHHHHHHHHhc--------------------
Q 042825 418 NNFSEENRLGRGGVGTVYKGELKDG-----TEVGVKRMELGSVTEQGIAQFESEITVLTK-------------------- 472 (631)
Q Consensus 418 ~~f~~~~~iG~G~fg~Vyk~~~~~g-----~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~-------------------- 472 (631)
+.|+..++||+|+||+||+|.++.. ..||||++.... ......+|.+|++++.+
T Consensus 7 ~~~~~~~~iG~G~fG~Vy~~~~~~~~~~~~~~vAvK~~~~~~-~~~~~~~~~~E~~il~~l~H~nIv~~~g~~~~~~~~~ 85 (283)
T d1mqba_ 7 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGY-TEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMM 85 (283)
T ss_dssp TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTC-CHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEE
T ss_pred HHeEeeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEEECccc-ChHHHHHHHHHHHHHHhcCCCCEeeeeEEEecCCceE
Confidence 4688899999999999999987642 479999997543 45566789999999987
Q ss_pred --------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccC
Q 042825 473 --------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVP 520 (631)
Q Consensus 473 --------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~ 520 (631)
|++.+.+ ......++|.++++++.++|+| +.+||+|||+|+.+.
T Consensus 86 ~v~e~~~~~~l~~~~----~~~~~~~~~~~~~~i~~~i~~gl~~lH~~~iiHrDlKp~NILl~~~~~~Kl~DFGla~~~~ 161 (283)
T d1mqba_ 86 IITEYMENGALDKFL----REKDGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLE 161 (283)
T ss_dssp EEEECCTTEEHHHHH----HHTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCCCC-----
T ss_pred EEEEecccCcchhhh----hcccccccHHHHHHHHHHHHHhhhhccccccccCccccceEEECCCCeEEEcccchhhccc
Confidence 2333322 2334579999999999999988 568999999999874
Q ss_pred CCCcc-ccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHhHhh--hcCChh
Q 042825 521 ENGKH-SILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQKM--HKNHDT 597 (631)
Q Consensus 521 ~~~~~-~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~~~~--~~~~~~ 597 (631)
..... .......||+.|||||++.+..++.++|||||||++|||+||..|+............+..-.+.. ...+.+
T Consensus 162 ~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~sDI~S~Gvil~el~t~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 241 (283)
T d1mqba_ 162 DDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGFRLPTPMDCPSA 241 (283)
T ss_dssp ------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCCCCCTTCBHH
T ss_pred CCCccceEeccCCCCccccCHHHHccCCCCCcccccccHHHHHHHHhCCCCccccCCHHHHHHHHhccCCCCCchhhHHH
Confidence 32221 223345789999999999999999999999999999999997666654332211111111111111 112367
Q ss_pred HHHHHHhhcCCChhhHHhHHHHHHHHHhh
Q 042825 598 FQMAIDKTIQLDEENLANVSTVAELGDHC 626 (631)
Q Consensus 598 l~~~id~~L~~d~~~r~~~~~vl~lal~C 626 (631)
+.+++..|+..||.+||++.++++.--.+
T Consensus 242 l~~li~~cl~~~p~~RPt~~eil~~L~~l 270 (283)
T d1mqba_ 242 IYQLMMQCWQQERARRPKFADIVSILDKL 270 (283)
T ss_dssp HHHHHHHHTCSSTTTSCCHHHHHHHHHHH
T ss_pred HHHHHHHHCcCCHhHCcCHHHHHHHHHHH
Confidence 99999999999999999999998754333
|
| >d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Vascular endothelial growth factor receptor 2 (kdr) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.95 E-value=2.3e-28 Score=248.75 Aligned_cols=211 Identities=20% Similarity=0.257 Sum_probs=149.9
Q ss_pred hcCCcccceeecCCCceEEEEEEec------CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc-----------------
Q 042825 416 ATNNFSEENRLGRGGVGTVYKGELK------DGTEVGVKRMELGSVTEQGIAQFESEITVLTK----------------- 472 (631)
Q Consensus 416 ~t~~f~~~~~iG~G~fg~Vyk~~~~------~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~----------------- 472 (631)
..++|+..+.||+|+||+||+|++. +++.||||+++... .....+.+.+|+..+.+
T Consensus 11 ~~~~y~~~~~iG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~-~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~ 89 (299)
T d1ywna1 11 PRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA-THSEHRALMSELKILIHIGHHLNVVNLLGACTKP 89 (299)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEEESTTSSSCEEEEEEEEC-----CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECST
T ss_pred cHHHEEEeeEEeecCCeEEEEEEEcCCCcccCCeEEEEEEEcccc-CcHHHHHHHHHHHHHHhhcCCCeEEEeeeeeccC
Confidence 3467999999999999999999864 25689999987543 34456678888877754
Q ss_pred -------------CChhHHhHhhhhc-----------CCCCCCHHHHHHHHHHhhcC-----------------------
Q 042825 473 -------------GTLGRHLFNWEEE-----------GLEPLEWNTRLNIALDVARG----------------------- 505 (631)
Q Consensus 473 -------------gsL~~~L~~~~~~-----------~~~~L~~~~~~~I~~~ia~g----------------------- 505 (631)
|+|.++++..... ....++|.++..++.++|+|
T Consensus 90 ~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~ivHrDlKp~NILl~~ 169 (299)
T d1ywna1 90 GGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSE 169 (299)
T ss_dssp TSCCEEEEECCTTCBHHHHHHHTGGGBCC-----------CBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECG
T ss_pred CCeEEEEEEecCCCcHHHHHHhccccccccccchhhhhcccCCHHHHHHHHHHHHHHHHHHHhCCCcCCcCCccceeECC
Confidence 7888888643211 12458999999999999988
Q ss_pred -CCcEEEeeccccccCCCCccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcC-CCCCCCCCCChHHHHH
Q 042825 506 -DDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITG-RKVVDATHSDPEYIIH 583 (631)
Q Consensus 506 -~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG-~~P~~~~~~~~~~~~~ 583 (631)
+.+||+|||+|+...............||+.|||||++.+..++.++|||||||++|||+|| +.||.+..........
T Consensus 170 ~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gvil~ellt~~~~p~~~~~~~~~~~~~ 249 (299)
T d1ywna1 170 KNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRR 249 (299)
T ss_dssp GGCEEECC------CCSCTTSCCTTSCCCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSHHHHHH
T ss_pred CCcEEEccCcchhhccccccccccCceeeCccccchhHhhcCCCCcccceeehHHHHHHHHhCCCCCCCCCCHHHHHHHH
Confidence 56899999999976544333344567899999999999999999999999999999999997 4578765544333233
Q ss_pred HHHHhHhhh--cCChhHHHHHHhhcCCChhhHHhHHHHHHHHHhhh
Q 042825 584 LATWFQKMH--KNHDTFQMAIDKTIQLDEENLANVSTVAELGDHCC 627 (631)
Q Consensus 584 l~~~~~~~~--~~~~~l~~~id~~L~~d~~~r~~~~~vl~lal~C~ 627 (631)
+....+... ..++++.+++.+|+..||.+|+++.++++..-..+
T Consensus 250 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~eil~~L~~il 295 (299)
T d1ywna1 250 LKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLL 295 (299)
T ss_dssp HHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HhcCCCCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence 332221111 23468999999999999999999999987544333
|
| >d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Calmodulin-dependent protein kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.95 E-value=6.4e-29 Score=253.31 Aligned_cols=196 Identities=21% Similarity=0.275 Sum_probs=135.8
Q ss_pred hcCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc----------------------
Q 042825 416 ATNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK---------------------- 472 (631)
Q Consensus 416 ~t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~---------------------- 472 (631)
..+.|+..+.||+|+||+||+|+.+ +|+.||||++...... ...+.+.+|+++|.+
T Consensus 7 i~d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~-~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv 85 (307)
T d1a06a_ 7 IRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALE-GKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLI 85 (307)
T ss_dssp GGGTEEEEEESBSGGGGGEEEEEETTTCCEEEEEEEEC-----------CHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred CccceEEEEEEeeccCeEEEEEEECCCCCEEEEEEEchHHhh-hHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEE
Confidence 4567999999999999999999976 5899999999865433 234678899999976
Q ss_pred ------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC---------------------------CCcEEEeecccccc
Q 042825 473 ------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG---------------------------DDMRVADFGLVRLV 519 (631)
Q Consensus 473 ------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g---------------------------~~~kl~DFGla~~~ 519 (631)
|+|.+++.. ...+++.....++.+++.| +.+||+|||+|+..
T Consensus 86 mE~~~gg~L~~~l~~-----~~~l~e~~~~~~~~qi~~al~ylH~~~iiHrDiKp~Nil~~~~~~~~~vkl~DFG~a~~~ 160 (307)
T d1a06a_ 86 MQLVSGGELFDRIVE-----KGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKME 160 (307)
T ss_dssp ECCCCSCBHHHHHHT-----CSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSTTCCEEECCC------
T ss_pred EeccCCCcHHHhhhc-----ccCCCHHHHHHHHHHHHHHHHhhhhceeeeEEecccceeecccCCCceEEEeccceeEEc
Confidence 788777742 3468898888898888877 35899999999876
Q ss_pred CCCCccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHh-H---h-hhcC
Q 042825 520 PENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWF-Q---K-MHKN 594 (631)
Q Consensus 520 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~-~---~-~~~~ 594 (631)
... ......+||+.|||||++.+..|+.++||||+||++|||+||+.||.+..... ....+.... . . ....
T Consensus 161 ~~~---~~~~~~~GT~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~-~~~~i~~~~~~~~~~~~~~~ 236 (307)
T d1a06a_ 161 DPG---SVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAK-LFEQILKAEYEFDSPYWDDI 236 (307)
T ss_dssp ---------------CTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHTTCCCCCTTTTTTS
T ss_pred cCC---CeeeeeeeCccccCcHHHcCCCCCcHHHhhhhhHHHHHHHhCCCCCCCCCHHH-HHHHHhccCCCCCCccccCC
Confidence 422 22345789999999999999999999999999999999999999998653221 111111110 0 0 0123
Q ss_pred ChhHHHHHHhhcCCChhhHHhHHHHHH
Q 042825 595 HDTFQMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 595 ~~~l~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
++++.+++.+||..||.+|+++.++++
T Consensus 237 s~~~~~li~~~L~~dP~~R~s~~eil~ 263 (307)
T d1a06a_ 237 SDSAKDFIRHLMEKDPEKRFTCEQALQ 263 (307)
T ss_dssp CHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred CHHHHHHHHHHccCCHhHCcCHHHHhc
Confidence 568999999999999999999999876
|
| >d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-src tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.95 E-value=1.4e-28 Score=247.91 Aligned_cols=199 Identities=25% Similarity=0.345 Sum_probs=145.9
Q ss_pred CCcccceeecCCCceEEEEEEecCCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc-------------------------
Q 042825 418 NNFSEENRLGRGGVGTVYKGELKDGTEVGVKRMELGSVTEQGIAQFESEITVLTK------------------------- 472 (631)
Q Consensus 418 ~~f~~~~~iG~G~fg~Vyk~~~~~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~------------------------- 472 (631)
++|+..+.||+|+||+||+|++++++.||||++...... .++|.+|++++.+
T Consensus 17 ~~~~i~~~iG~G~fg~Vy~~~~~~~~~vAiK~l~~~~~~---~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~lv~Ey~ 93 (285)
T d1fmka3 17 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS---PEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYM 93 (285)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTSSC---HHHHHHHHHHHHHCCCTTBCCEEEEECSSSCEEEECCC
T ss_pred HHEEEeeEEeeCCCeEEEEEEECCCCEEEEEEECcccCC---HHHHHHHHHHHHhcccCCEeEEEEEEecCCeEEEEEec
Confidence 578899999999999999999988889999999765433 3679999999986
Q ss_pred --CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCCccc
Q 042825 473 --GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENGKHS 526 (631)
Q Consensus 473 --gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~~~~ 526 (631)
|++..++.. +....++|.+++.|+.++|+| +++||+|||+|+..... ...
T Consensus 94 ~~g~l~~~~~~---~~~~~l~~~~~~~i~~~i~~gl~~LH~~~ivH~DlKp~NIll~~~~~~kl~DfGla~~~~~~-~~~ 169 (285)
T d1fmka3 94 SKGSLLDFLKG---ETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDN-EYT 169 (285)
T ss_dssp TTCBHHHHHSH---HHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCCTTC---------
T ss_pred CCCchhhhhhh---cccccchHHHHHHHHHHHHHHHHHHhhhheecccccceEEEECCCCcEEEcccchhhhccCC-Cce
Confidence 566655543 222458999999999999988 56799999999977422 222
Q ss_pred cccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHh-H--hhhcCChhHHHHHH
Q 042825 527 ILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWF-Q--KMHKNHDTFQMAID 603 (631)
Q Consensus 527 ~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~-~--~~~~~~~~l~~~id 603 (631)
......||+.|+|||++..+.++.++|||||||++|||+||..|+....... .......+. + .....++++.+++.
T Consensus 170 ~~~~~~gt~~y~aPE~~~~~~~~~ksDI~S~Giil~el~t~~~p~~~~~~~~-~~~~~i~~~~~~~~~~~~~~~l~~li~ 248 (285)
T d1fmka3 170 ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR-EVLDQVERGYRMPCPPECPESLHDLMC 248 (285)
T ss_dssp ------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHH-HHHHHHHTTCCCCCCTTSCHHHHHHHH
T ss_pred eeccccccccccChHHHhCCCCCcHHhhhcchHHHHHHHhCCCCCCCCCCHH-HHHHHHHhcCCCCCCcccCHHHHHHHH
Confidence 3345679999999999999999999999999999999999777765443321 122211111 0 11122468999999
Q ss_pred hhcCCChhhHHhHHHHHHHHH
Q 042825 604 KTIQLDEENLANVSTVAELGD 624 (631)
Q Consensus 604 ~~L~~d~~~r~~~~~vl~lal 624 (631)
+|+..||++||++.+|++.--
T Consensus 249 ~cl~~dP~~Rps~~~i~~~L~ 269 (285)
T d1fmka3 249 QCWRKEPEERPTFEYLQAFLE 269 (285)
T ss_dssp HHTCSSGGGSCCHHHHHHHHH
T ss_pred HHcccCHhHCcCHHHHHHHHh
Confidence 999999999999999876443
|
| >d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.95 E-value=1.2e-28 Score=253.31 Aligned_cols=196 Identities=20% Similarity=0.323 Sum_probs=148.4
Q ss_pred hcCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc----------------------
Q 042825 416 ATNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK---------------------- 472 (631)
Q Consensus 416 ~t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~---------------------- 472 (631)
..++|+..+.||+|+||+||+|+.. +|+.||||+++... .....+++.+|+.+|++
T Consensus 4 ~~d~y~~~~~iG~G~fg~V~~~~~~~~~~~vAiK~i~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~iV 82 (322)
T d1s9ja_ 4 KDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEI-KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISIC 82 (322)
T ss_dssp CGGGEEEEEEEECCSSCCEEEEEETTTTEEEEEEEEECCC-CTTHHHHHHHHGGGGGGCCCTTBCCEEEEEECSSEEEEE
T ss_pred CccCCEEEEEEecCCCeEEEEEEECCCCcEEEEEEEChhh-CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEE
Confidence 3568999999999999999999975 68999999997653 33456789999999876
Q ss_pred ------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC-------------------------CCcEEEeeccccccCC
Q 042825 473 ------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG-------------------------DDMRVADFGLVRLVPE 521 (631)
Q Consensus 473 ------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g-------------------------~~~kl~DFGla~~~~~ 521 (631)
|+|.+++.. ...+++.....++.+++.| +.+||+|||+|+....
T Consensus 83 mEy~~gg~L~~~l~~-----~~~l~~~~~~~~~~qil~aL~yLH~~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~ 157 (322)
T d1s9ja_ 83 MEHMDGGSLDQVLKK-----AGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID 157 (322)
T ss_dssp EECCTTEEHHHHHHH-----HSSCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHH
T ss_pred EEcCCCCcHHHHHhh-----cCCCCHHHHHHHHHHHHHHHHHHHHhCCEEccccCHHHeeECCCCCEEEeeCCCccccCC
Confidence 577777753 1357888887777777766 5789999999987632
Q ss_pred CCccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHH-----------------
Q 042825 522 NGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHL----------------- 584 (631)
Q Consensus 522 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l----------------- 584 (631)
......+||+.|||||++.+..|+.++||||+||++|||++|+.||.+...........
T Consensus 158 ----~~~~~~~GT~~Y~APEvl~~~~y~~~~DiWSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (322)
T d1s9ja_ 158 ----SMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTP 233 (322)
T ss_dssp ----HTC---CCSSCCCCHHHHHCSCCCTTHHHHHHHHHHHHHHHSSCCSSCCCTTHHHHHC------------------
T ss_pred ----CccccccCCccccCchHHcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhcCCcccCCcccccc
Confidence 22345789999999999999999999999999999999999999998654432111000
Q ss_pred --------------------HHHhHhh----h---cCChhHHHHHHhhcCCChhhHHhHHHHHH
Q 042825 585 --------------------ATWFQKM----H---KNHDTFQMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 585 --------------------~~~~~~~----~---~~~~~l~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
..+.... . ..+.++.+++.+||..||.+|+++.++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~L~ 297 (322)
T d1s9ja_ 234 GRPLSSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMV 297 (322)
T ss_dssp ------------CCCCHHHHHHHHHTSCCCCCCBTTBCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred cccccccccccccchhHHHHHhhhhccCCccCccccCCHHHHHHHHHHcCCChhHCcCHHHHhh
Confidence 0000000 0 01357899999999999999999999876
|
| >d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase SYK species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.95 E-value=1e-28 Score=248.20 Aligned_cols=192 Identities=21% Similarity=0.256 Sum_probs=142.4
Q ss_pred eeecCCCceEEEEEEecC---CcEEEEEEEecCCCCHHHHHHHHHHHHHHhc---------------------------C
Q 042825 424 NRLGRGGVGTVYKGELKD---GTEVGVKRMELGSVTEQGIAQFESEITVLTK---------------------------G 473 (631)
Q Consensus 424 ~~iG~G~fg~Vyk~~~~~---g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~---------------------------g 473 (631)
+.||+|+||+||+|.+++ ++.||||+++.........++|.+|+++|.+ |
T Consensus 13 k~iG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~g~~~~~~~~lvmE~~~~g 92 (277)
T d1xbba_ 13 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELG 92 (277)
T ss_dssp EEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEESSSEEEEEECCTTE
T ss_pred CCcccCCCeEEEEEEEccCCcCeEEEEEEEChhhCCHHHHHHHHHHHHHHHhCCCCCCceEEEEeccCCEEEEEEcCCCC
Confidence 579999999999998653 5689999997655445566789999999987 6
Q ss_pred ChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCCcc-ccc
Q 042825 474 TLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENGKH-SIL 528 (631)
Q Consensus 474 sL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~~~-~~~ 528 (631)
+|.+++.. ...++|..++.|+.++|+| +.+||+|||+|+.+...... ...
T Consensus 93 ~L~~~l~~-----~~~l~~~~~~~i~~qi~~gl~ylH~~~iiHrDlKp~Nill~~~~~~kl~DFGla~~~~~~~~~~~~~ 167 (277)
T d1xbba_ 93 PLNKYLQQ-----NRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ 167 (277)
T ss_dssp EHHHHHHH-----CTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCTTCEECCTTCSEEEC-
T ss_pred cHHHHHhh-----ccCCCHHHHHHHHHHHHHHHhhHHhCCcccCCCcchhhcccccCcccccchhhhhhccccccccccc
Confidence 77776642 3468999999999999988 45689999999987533222 223
Q ss_pred cccccCcccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChHHHHHHHHHhHh--hhcCChhHHHHHHhh
Q 042825 529 TKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT-GRKVVDATHSDPEYIIHLATWFQK--MHKNHDTFQMAIDKT 605 (631)
Q Consensus 529 ~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~Ellt-G~~P~~~~~~~~~~~~~l~~~~~~--~~~~~~~l~~~id~~ 605 (631)
....||+.|||||.+.+..++.++|||||||++|||+| |+.||.+....+ ....+..-.+. ....++++.+++.+|
T Consensus 168 ~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gv~l~ellt~g~~Pf~~~~~~~-~~~~i~~~~~~~~p~~~~~~~~~li~~c 246 (277)
T d1xbba_ 168 THGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE-VTAMLEKGERMGCPAGCPREMYDLMNLC 246 (277)
T ss_dssp ---CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH-HHHHHHTTCCCCCCTTCCHHHHHHHHHH
T ss_pred cccCCCceecCchhhcCCCCCchhhhccchhhhhHHhhCCCCCCCCCCHHH-HHHHHHcCCCCCCCcccCHHHHHHHHHH
Confidence 44679999999999999999999999999999999998 899998653221 11111111111 111247899999999
Q ss_pred cCCChhhHHhHHHHHH
Q 042825 606 IQLDEENLANVSTVAE 621 (631)
Q Consensus 606 L~~d~~~r~~~~~vl~ 621 (631)
+..||.+||++.++.+
T Consensus 247 l~~dp~~RPs~~~i~~ 262 (277)
T d1xbba_ 247 WTYDVENRPGFAAVEL 262 (277)
T ss_dssp TCSSTTTSCCHHHHHH
T ss_pred cCCCHhHCcCHHHHHH
Confidence 9999999999998765
|
| >d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: STE20-like serine/threonine-protein kinase, SLK species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.95 E-value=9.1e-29 Score=249.83 Aligned_cols=195 Identities=19% Similarity=0.275 Sum_probs=150.1
Q ss_pred CCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc------------------------
Q 042825 418 NNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK------------------------ 472 (631)
Q Consensus 418 ~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~------------------------ 472 (631)
+.|+..+.||+|+||+||+|+.. +|+.||||++.... ....++|.+|+++|++
T Consensus 12 d~Y~i~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~--~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lvmE 89 (288)
T d2jfla1 12 DFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKS--EEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIE 89 (288)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECSS--SGGGGGTHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred cCeEEeEEEeeCCCcEEEEEEECCCCeEEEEEEECcCC--HHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCeEEEEEe
Confidence 46888999999999999999975 58999999997653 2345778999999976
Q ss_pred ----CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCCc
Q 042825 473 ----GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENGK 524 (631)
Q Consensus 473 ----gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~~ 524 (631)
|+|.+++.. ....+++.+...++.+++.| +.+||+|||+|+.... .
T Consensus 90 y~~~g~L~~~~~~----~~~~l~e~~~~~i~~qi~~gL~ylH~~~ivHrDiKp~NIll~~~~~~Kl~DFG~a~~~~~--~ 163 (288)
T d2jfla1 90 FCAGGAVDAVMLE----LERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTR--T 163 (288)
T ss_dssp CCTTEEHHHHHHH----HTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECHH--H
T ss_pred cCCCCcHHHHHHh----cCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEeecChhheeECCCCCEEEEechhhhccCC--C
Confidence 666666542 23468999999999998887 5689999999986531 1
Q ss_pred cccccccccCcccccccccc-----cCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHh----HhhhcCC
Q 042825 525 HSILTKVAGTFGYLAPEYIV-----TGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWF----QKMHKNH 595 (631)
Q Consensus 525 ~~~~~~~~gt~~Y~aPE~~~-----~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~----~~~~~~~ 595 (631)
.......+||+.|||||++. ...|+.++|||||||++|||+||+.||.+....+... .+.... ......+
T Consensus 164 ~~~~~~~~Gt~~y~APE~l~~~~~~~~~y~~k~DiwSlGvilyemltg~~Pf~~~~~~~~~~-~i~~~~~~~~~~~~~~s 242 (288)
T d2jfla1 164 IQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLL-KIAKSEPPTLAQPSRWS 242 (288)
T ss_dssp HHHHTCCCSCCTTCCHHHHTTCSTTTSSTTTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHH-HHHHSCCCCCSSGGGSC
T ss_pred cccccccccccccCCHHHHhhcccCCCCCChhhhHHHHHHHHHHHhhCCCCCCCCCHHHHHH-HHHcCCCCCCCccccCC
Confidence 22344678999999999984 4568999999999999999999999998765433221 222111 1112235
Q ss_pred hhHHHHHHhhcCCChhhHHhHHHHHH
Q 042825 596 DTFQMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 596 ~~l~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
+++.+++.+||..||.+|+++.++++
T Consensus 243 ~~~~~li~~~L~~dp~~R~t~~ell~ 268 (288)
T d2jfla1 243 SNFKDFLKKCLEKNVDARWTTSQLLQ 268 (288)
T ss_dssp HHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred HHHHHHHHHHccCChhHCcCHHHHhc
Confidence 78999999999999999999998875
|
| >d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: EGF receptor tyrosine kinase, Erbb-1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.95 E-value=3e-28 Score=249.93 Aligned_cols=199 Identities=23% Similarity=0.295 Sum_probs=145.8
Q ss_pred CCcccceeecCCCceEEEEEEec-CCc----EEEEEEEecCCCCHHHHHHHHHHHHHHhc--------------------
Q 042825 418 NNFSEENRLGRGGVGTVYKGELK-DGT----EVGVKRMELGSVTEQGIAQFESEITVLTK-------------------- 472 (631)
Q Consensus 418 ~~f~~~~~iG~G~fg~Vyk~~~~-~g~----~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~-------------------- 472 (631)
++|+..++||+|+||+||+|++. +|+ .||||+++... .....++|.+|++++.+
T Consensus 9 ~dy~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~ 87 (317)
T d1xkka_ 9 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT-SPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQL 87 (317)
T ss_dssp TTEEEEEEEEECSSEEEEEEEECC----CCEEEEEEEECC-----CTHHHHHHHHHHHHHCCCTTBCCEEEEEESSSEEE
T ss_pred HHCEEeeEEecCCCeEEEEEEEcCCCCEEEEEEEEEEecccc-CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeeE
Confidence 36999999999999999999865 344 68999886542 33456789999999977
Q ss_pred -------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCC
Q 042825 473 -------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPE 521 (631)
Q Consensus 473 -------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~ 521 (631)
|+|.+++. .....++|..+.+|+.++|+| +.+||+|||+|+....
T Consensus 88 v~e~~~~~~l~~~~~----~~~~~~~~~~~~~i~~qi~~gl~yLH~~~iiHrDlKp~NIll~~~~~~kl~DFGla~~~~~ 163 (317)
T d1xkka_ 88 ITQLMPFGCLLDYVR----EHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 163 (317)
T ss_dssp EEECCTTCBHHHHHH----HTSSSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETTEEEECCCSHHHHTTT
T ss_pred EEEeccCCccccccc----ccccCCCHHHHHHHHHHHHHHHHHHHHcCcccCcchhhcceeCCCCCeEeeccccceeccc
Confidence 55555543 335678999999999999987 4578999999998754
Q ss_pred CCccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChHHHHHHHHHhHhh--hcCChhH
Q 042825 522 NGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT-GRKVVDATHSDPEYIIHLATWFQKM--HKNHDTF 598 (631)
Q Consensus 522 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~Ellt-G~~P~~~~~~~~~~~~~l~~~~~~~--~~~~~~l 598 (631)
...........||+.|||||++.++.|+.++|||||||++|||+| |+.||++....+. ...+....+.. ...++++
T Consensus 164 ~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDvwS~Gvil~el~t~g~~p~~~~~~~~~-~~~i~~~~~~~~p~~~~~~~ 242 (317)
T d1xkka_ 164 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI-SSILEKGERLPQPPICTIDV 242 (317)
T ss_dssp TCC--------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCGGGH-HHHHHHTCCCCCCTTBCHHH
T ss_pred ccccccccccccCccccChHHHhcCCCChhhhhhhHHHHHHHHHHCCCCCCCCCCHHHH-HHHHHcCCCCCCCcccCHHH
Confidence 443334455679999999999999999999999999999999999 7899886544321 12222211111 1124679
Q ss_pred HHHHHhhcCCChhhHHhHHHHHHH
Q 042825 599 QMAIDKTIQLDEENLANVSTVAEL 622 (631)
Q Consensus 599 ~~~id~~L~~d~~~r~~~~~vl~l 622 (631)
.+++.+|+..||.+||++.++++-
T Consensus 243 ~~li~~cl~~dP~~RPs~~eil~~ 266 (317)
T d1xkka_ 243 YMIMVKCWMIDADSRPKFRELIIE 266 (317)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHHHhCCCChhhCcCHHHHHHH
Confidence 999999999999999999998764
|
| >d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: Caenorhabditis elegans, pjk4 [TaxId: 6239]
Probab=99.95 E-value=7.8e-28 Score=249.52 Aligned_cols=195 Identities=17% Similarity=0.263 Sum_probs=153.1
Q ss_pred cCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc-----------------------
Q 042825 417 TNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK----------------------- 472 (631)
Q Consensus 417 t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~----------------------- 472 (631)
.++|+..+.||+|+||+||+|+.. +|+.||||++.... ....+.+.+|+++|.+
T Consensus 25 l~~Y~i~~~lG~G~fg~Vy~~~~~~~g~~vAvK~i~~~~--~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivm 102 (350)
T d1koaa2 25 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPH--ESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIY 102 (350)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECCCS--HHHHHHHHHHHHHHHHTCCTTBCCEEEEEEETTEEEEEE
T ss_pred ccCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEcccc--hhhHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence 458999999999999999999975 69999999997643 3456789999999876
Q ss_pred -----CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC--------------------------CCcEEEeeccccccCC
Q 042825 473 -----GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG--------------------------DDMRVADFGLVRLVPE 521 (631)
Q Consensus 473 -----gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g--------------------------~~~kl~DFGla~~~~~ 521 (631)
|+|.+++. .....+++.....|+.+++.| +.+||+|||+|+.+..
T Consensus 103 E~~~gg~L~~~l~----~~~~~l~e~~~~~i~~qi~~aL~ylH~~~iiHrDiKp~NIll~~~~~~~vkL~DFG~a~~~~~ 178 (350)
T d1koaa2 103 EFMSGGELFEKVA----DEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDP 178 (350)
T ss_dssp CCCCSCBHHHHHT----CTTSCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTSCCEEECCCTTCEECCT
T ss_pred EcCCCCCHHHHHH----hhcCCCCHHHHHHHHHHHHHHHHHHHhcCCeeeeechhHeeeccCCCCeEEEeecchheeccc
Confidence 67777663 223468999999999998876 4589999999998743
Q ss_pred CCccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHh----H-hhhcCCh
Q 042825 522 NGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWF----Q-KMHKNHD 596 (631)
Q Consensus 522 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~----~-~~~~~~~ 596 (631)
. .......||+.|||||++.+..|+.++||||+||++|||+||+.||.+....+ ....+.... . .....++
T Consensus 179 ~---~~~~~~~gT~~Y~aPEv~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~-~~~~i~~~~~~~~~~~~~~~s~ 254 (350)
T d1koaa2 179 K---QSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDE-TLRNVKSCDWNMDDSAFSGISE 254 (350)
T ss_dssp T---SCEEEECSCTTTCCHHHHHTCCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHTCCCSCCGGGGGCCH
T ss_pred c---cccceecCcccccCHHHHcCCCCChhHhhhhhhHHHHHHHhCCCCCCCCCHHH-HHHHHHhCCCCCCcccccCCCH
Confidence 2 22345689999999999999999999999999999999999999998653321 112222211 0 1112357
Q ss_pred hHHHHHHhhcCCChhhHHhHHHHHH
Q 042825 597 TFQMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 597 ~l~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
+++++|.+||..||.+|+++.++++
T Consensus 255 ~~~~li~~~L~~dP~~R~t~~eil~ 279 (350)
T d1koaa2 255 DGKDFIRKLLLADPNTRMTIHQALE 279 (350)
T ss_dssp HHHHHHHHHCCSSGGGSCCHHHHHH
T ss_pred HHHHHHHHHccCChhHCcCHHHHhc
Confidence 8999999999999999999999876
|
| >d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine protein kinase TAO2 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.95 E-value=5.5e-28 Score=246.45 Aligned_cols=191 Identities=20% Similarity=0.293 Sum_probs=145.3
Q ss_pred CcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCC-HHHHHHHHHHHHHHhc------------------------
Q 042825 419 NFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVT-EQGIAQFESEITVLTK------------------------ 472 (631)
Q Consensus 419 ~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~-~~~~~~~~~Ei~~l~~------------------------ 472 (631)
.|+..+.||+|+||+||+|+.. +|+.||||++...... ....+++.+|+++|.+
T Consensus 16 ~y~~l~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~iv~E 95 (309)
T d1u5ra_ 16 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVME 95 (309)
T ss_dssp HEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEECCSSCHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred hcEeeEEEecCCCeEEEEEEECCCCcEEEEEEEchhhccCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEECCEEEEEEE
Confidence 4889999999999999999965 6899999999865443 3455779999999987
Q ss_pred ----CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCCc
Q 042825 473 ----GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENGK 524 (631)
Q Consensus 473 ----gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~~ 524 (631)
|++..++ .....+++.+...++.+++.| +.+||+|||+|+....
T Consensus 96 ~~~~g~l~~~~-----~~~~~l~e~~~~~i~~qi~~aL~yLH~~~iiHrDiKp~NILl~~~~~~Kl~DFG~a~~~~~--- 167 (309)
T d1u5ra_ 96 YCLGSASDLLE-----VHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP--- 167 (309)
T ss_dssp CCSEEHHHHHH-----HHTSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTTEEEECCCTTCBSSSS---
T ss_pred ecCCCchHHHH-----HhCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccCCCcceEEECCCCCEEEeecccccccCC---
Confidence 3332222 123568999999999999887 4579999999987632
Q ss_pred cccccccccCccccccccccc---CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHhHhhh---cCChhH
Q 042825 525 HSILTKVAGTFGYLAPEYIVT---GRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQKMH---KNHDTF 598 (631)
Q Consensus 525 ~~~~~~~~gt~~Y~aPE~~~~---~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~~~~~---~~~~~l 598 (631)
.....||+.|||||++.+ ..|+.++|||||||++|||++|+.||.+..... ....+........ ..++++
T Consensus 168 ---~~~~~GT~~Y~APE~~~~~~~~~y~~~~DiwSlGvilyel~~g~~Pf~~~~~~~-~~~~i~~~~~~~~~~~~~s~~~ 243 (309)
T d1u5ra_ 168 ---ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS-ALYHIAQNESPALQSGHWSEYF 243 (309)
T ss_dssp ---BCCCCSCGGGCCHHHHTTTTSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH-HHHHHHHSCCCCCSCTTSCHHH
T ss_pred ---CCccccCccccCHHHHhccCCCCcCchhhhhhHHHHHHHHHHCCCCCCCCCHHH-HHHHHHhCCCCCCCCCCCCHHH
Confidence 234679999999999864 458999999999999999999999997643221 1111211111111 125689
Q ss_pred HHHHHhhcCCChhhHHhHHHHHH
Q 042825 599 QMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 599 ~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
.+++.+||..||.+|+++.++++
T Consensus 244 ~~li~~~L~~dP~~Rpt~~ell~ 266 (309)
T d1u5ra_ 244 RNFVDSCLQKIPQDRPTSEVLLK 266 (309)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHTT
T ss_pred HHHHHHHCcCChhHCcCHHHHHh
Confidence 99999999999999999998865
|
| >d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Death-associated protein kinase, Dap species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.94 E-value=1.3e-27 Score=242.37 Aligned_cols=196 Identities=17% Similarity=0.266 Sum_probs=152.2
Q ss_pred cCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCH----HHHHHHHHHHHHHhc-------------------
Q 042825 417 TNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTE----QGIAQFESEITVLTK------------------- 472 (631)
Q Consensus 417 t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~----~~~~~~~~Ei~~l~~------------------- 472 (631)
.+.|+..+.||+|+||+||+|+.+ +|+.||||++....... ...+.|.+|+++|++
T Consensus 9 ~d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~ 88 (293)
T d1jksa_ 9 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDV 88 (293)
T ss_dssp GGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred ccCEEEeEEEecCCCeEEEEEEECCCCCEEEEEEEEhhhcchhhhhHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEE
Confidence 467999999999999999999975 69999999997643322 235789999999876
Q ss_pred ---------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC----------------------------CCcEEEeecc
Q 042825 473 ---------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG----------------------------DDMRVADFGL 515 (631)
Q Consensus 473 ---------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g----------------------------~~~kl~DFGl 515 (631)
|+|.+++.. ...+++.....++.+++.| ..+|++|||+
T Consensus 89 ~iv~E~~~gg~L~~~i~~-----~~~l~~~~~~~~~~qi~~al~yLH~~~ivHrDiKp~Nill~~~~~~~~~vkl~DfG~ 163 (293)
T d1jksa_ 89 ILILELVAGGELFDFLAE-----KESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL 163 (293)
T ss_dssp EEEEECCCSCBHHHHHHH-----HSSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCSSSSSCCEEECCCTT
T ss_pred EEEEEcCCCccccchhcc-----ccccchhHHHHHHHHHHHHHHhhhhcceeecccccceEEEecCCCcccceEecchhh
Confidence 788887753 1368898888898888877 1479999999
Q ss_pred ccccCCCCccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHH----hHh-
Q 042825 516 VRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATW----FQK- 590 (631)
Q Consensus 516 a~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~----~~~- 590 (631)
|+...... ......||+.|+|||++.+..++.++||||+||++|||+||+.||.+....+ ....+... ...
T Consensus 164 a~~~~~~~---~~~~~~~t~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~-~~~~i~~~~~~~~~~~ 239 (293)
T d1jksa_ 164 AHKIDFGN---EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE-TLANVSAVNYEFEDEY 239 (293)
T ss_dssp CEECTTSC---BCSCCCCCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHTTCCCCCHHH
T ss_pred hhhcCCCc---cccccCCCCcccCHHHHcCCCCCCcccchhhhHHHHHHHcCCCCCCCCCHHH-HHHHHHhcCCCCCchh
Confidence 98874222 2345679999999999999999999999999999999999999998654321 11111111 011
Q ss_pred hhcCChhHHHHHHhhcCCChhhHHhHHHHHH
Q 042825 591 MHKNHDTFQMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 591 ~~~~~~~l~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
....+.+++++|.+||..||.+|+++.++++
T Consensus 240 ~~~~s~~~~~li~~~L~~dP~~R~s~~eil~ 270 (293)
T d1jksa_ 240 FSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ 270 (293)
T ss_dssp HTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred cCCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 1223568899999999999999999999875
|
| >d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Pkb kinase (Akt-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.94 E-value=5.7e-28 Score=249.07 Aligned_cols=198 Identities=19% Similarity=0.262 Sum_probs=146.9
Q ss_pred cCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCC-CHHHHHHHHHHHHHHhc----------------------
Q 042825 417 TNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSV-TEQGIAQFESEITVLTK---------------------- 472 (631)
Q Consensus 417 t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~-~~~~~~~~~~Ei~~l~~---------------------- 472 (631)
.++|+..+.||+|+||.||+|+.+ +|+.||||++.+... .....+.+.+|+.+|++
T Consensus 4 l~dy~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~iv 83 (337)
T d1o6la_ 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFV 83 (337)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEE
T ss_pred hHhcEEEEEEecCcCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhCCCCCEEEEEeeeccccccccc
Confidence 357999999999999999999975 699999999975422 11235678999999977
Q ss_pred ------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCC
Q 042825 473 ------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPEN 522 (631)
Q Consensus 473 ------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~ 522 (631)
|+|.+++.. ...++......++.+++.| +.+||+|||+|+.....
T Consensus 84 ~ey~~gg~L~~~~~~-----~~~~~e~~~~~~~~qil~al~ylH~~~iiHRDlKP~NILl~~~g~vkl~DFG~a~~~~~~ 158 (337)
T d1o6la_ 84 MEYANGGELFFHLSR-----ERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD 158 (337)
T ss_dssp EECCTTCBHHHHHHH-----HSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCT
T ss_pred eeccCCCchhhhhhc-----ccCCcHHHHHHHHHHHhhhhhhhhhcCccccccCHHHeEecCCCCEEEeecccccccccC
Confidence 677776643 1345666666666666655 67899999999976422
Q ss_pred CccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHhHhhhcCChhHHHHH
Q 042825 523 GKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQKMHKNHDTFQMAI 602 (631)
Q Consensus 523 ~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~i 602 (631)
.......+||+.|||||++.+..|+.++||||+||++|||++|+.||.+.....................+++++++|
T Consensus 159 --~~~~~~~~GT~~Y~aPE~~~~~~y~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~dli 236 (337)
T d1o6la_ 159 --GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKSLL 236 (337)
T ss_dssp --TCCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCTTSCHHHHHHH
T ss_pred --CcccccceeCHHHhhhhhccCCCCChhhcccchhhHHHHHHHCCCCCCCcCHHHHHHHHhcCCCCCCccCCHHHHHHH
Confidence 223456789999999999999999999999999999999999999998654322111111111111122357899999
Q ss_pred HhhcCCChhhHHh-----HHHHHH
Q 042825 603 DKTIQLDEENLAN-----VSTVAE 621 (631)
Q Consensus 603 d~~L~~d~~~r~~-----~~~vl~ 621 (631)
.++|+.||.+|++ +.++++
T Consensus 237 ~~~L~~dP~~R~~~~~~~~~eil~ 260 (337)
T d1o6la_ 237 AGLLKKDPKQRLGGGPSDAKEVME 260 (337)
T ss_dssp HHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred HhhccCCchhhcccccccHHHHHc
Confidence 9999999999984 666654
|
| >d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Focal adhesion kinase 1 (fak) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.94 E-value=1.6e-27 Score=239.18 Aligned_cols=199 Identities=18% Similarity=0.239 Sum_probs=140.2
Q ss_pred cCCcccceeecCCCceEEEEEEecC----CcEEEEEEEecCCCCHHHHHHHHHHHHHHhc--------------------
Q 042825 417 TNNFSEENRLGRGGVGTVYKGELKD----GTEVGVKRMELGSVTEQGIAQFESEITVLTK-------------------- 472 (631)
Q Consensus 417 t~~f~~~~~iG~G~fg~Vyk~~~~~----g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~-------------------- 472 (631)
.++|+..+.||+|+||+||+|++.. +..||||+++... .....+.|.+|++++++
T Consensus 6 ~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~vaik~~~~~~-~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~i 84 (273)
T d1mp8a_ 6 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCT-SDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWI 84 (273)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTT-SHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSCEE
T ss_pred HHHeEEEEEEeeCCCcEEEEEEEecCCceeEEEEEEEecccc-CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCeEEE
Confidence 3578899999999999999998653 4578999886533 44567789999999987
Q ss_pred -------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCC
Q 042825 473 -------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPE 521 (631)
Q Consensus 473 -------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~ 521 (631)
|++.+++. .....+++..+..++.++++| +.+||+|||+|+.+..
T Consensus 85 v~E~~~~g~l~~~~~----~~~~~l~~~~~~~~~~qi~~gl~ylH~~~iiHrDlKp~NIll~~~~~~Kl~DfG~a~~~~~ 160 (273)
T d1mp8a_ 85 IMELCTLGELRSFLQ----VRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMED 160 (273)
T ss_dssp EEECCTTEEHHHHHH----HTTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECC---------
T ss_pred EEEeccCCcHHhhhh----ccCCCCCHHHHHHHHHHHHHHhhhhcccCeeccccchhheeecCCCcEEEccchhheeccC
Confidence 44444432 234568999999999999987 5679999999987642
Q ss_pred CCccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChHHHHHHHHHh--HhhhcCChhH
Q 042825 522 NGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT-GRKVVDATHSDPEYIIHLATWF--QKMHKNHDTF 598 (631)
Q Consensus 522 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~Ellt-G~~P~~~~~~~~~~~~~l~~~~--~~~~~~~~~l 598 (631)
. .........||+.|+|||++.+..|+.++|||||||++|||+| |+.||.+....+... .+.... ......++++
T Consensus 161 ~-~~~~~~~~~gt~~y~apE~l~~~~~~~~~DiwSlGvil~e~lt~g~~P~~~~~~~~~~~-~i~~~~~~~~~~~~~~~~ 238 (273)
T d1mp8a_ 161 S-TYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIG-RIENGERLPMPPNCPPTL 238 (273)
T ss_dssp -----------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHH-HHHTTCCCCCCTTCCHHH
T ss_pred C-cceeccceecCcccchhhHhccCCCCCccccccchHHHHHHHhcCCCCCCCCCHHHHHH-HHHcCCCCCCCCCCCHHH
Confidence 2 2223445678999999999999999999999999999999998 899998765443221 121111 1111234789
Q ss_pred HHHHHhhcCCChhhHHhHHHHHHH
Q 042825 599 QMAIDKTIQLDEENLANVSTVAEL 622 (631)
Q Consensus 599 ~~~id~~L~~d~~~r~~~~~vl~l 622 (631)
.+++.+|+..||.+||++.++++.
T Consensus 239 ~~li~~cl~~dp~~Rps~~ei~~~ 262 (273)
T d1mp8a_ 239 YSLMTKCWAYDPSRRPRFTELKAQ 262 (273)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHHHHcCCCHhHCcCHHHHHHH
Confidence 999999999999999999998875
|
| >d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.94 E-value=1.1e-27 Score=245.15 Aligned_cols=193 Identities=19% Similarity=0.279 Sum_probs=143.5
Q ss_pred CCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCC-HHHHHHHHHHHHHHhc-----------------------
Q 042825 418 NNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVT-EQGIAQFESEITVLTK----------------------- 472 (631)
Q Consensus 418 ~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~-~~~~~~~~~Ei~~l~~----------------------- 472 (631)
++|+..+.||+|+||+||+|+.+ +|+.||||+++..... ....+.+.+|+.++++
T Consensus 4 ~dy~i~~~lG~G~fg~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivm 83 (316)
T d1fota_ 4 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIM 83 (316)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEE
T ss_pred hHeEEEEEEecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHhccCcChhheeeeEeeCCeeeeEe
Confidence 57999999999999999999975 5999999999753211 1235678999999986
Q ss_pred -----CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCC
Q 042825 473 -----GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENG 523 (631)
Q Consensus 473 -----gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~ 523 (631)
|++..++.. ...+.+.....++.+++.| +.+||+|||+|+....
T Consensus 84 E~~~gg~l~~~~~~-----~~~~~~~~~~~~~~qi~~al~~lH~~~iiHrDiKp~NILl~~~g~vkL~DFG~a~~~~~-- 156 (316)
T d1fota_ 84 DYIEGGELFSLLRK-----SQRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPD-- 156 (316)
T ss_dssp CCCCSCBHHHHHHH-----TSSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTTSCEEECCCSSCEECSS--
T ss_pred eecCCccccccccc-----cccccccHHHHHHHHHHHhhhhhccCcEEccccCchheeEcCCCCEEEecCccceEecc--
Confidence 444444421 2346666666777777765 6789999999998742
Q ss_pred ccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHH-hHhhhcCChhHHHHH
Q 042825 524 KHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATW-FQKMHKNHDTFQMAI 602 (631)
Q Consensus 524 ~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~-~~~~~~~~~~l~~~i 602 (631)
.....+||+.|||||++.+..|+.++||||+||++|||+||+.||.+....+. ...+... .......++++.+++
T Consensus 157 ---~~~~~~Gt~~Y~APE~l~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~-~~~i~~~~~~~p~~~s~~~~~li 232 (316)
T d1fota_ 157 ---VTYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKT-YEKILNAELRFPPFFNEDVKDLL 232 (316)
T ss_dssp ---CBCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHH-HHHHHHCCCCCCTTSCHHHHHHH
T ss_pred ---ccccccCcccccCHHHHcCCCCCchhhccccchhHHHHHhCCCCCCCcCHHHH-HHHHHcCCCCCCCCCCHHHHHHH
Confidence 23457899999999999999999999999999999999999999986533211 1111111 111122357899999
Q ss_pred HhhcCCChhhHH-----hHHHHHH
Q 042825 603 DKTIQLDEENLA-----NVSTVAE 621 (631)
Q Consensus 603 d~~L~~d~~~r~-----~~~~vl~ 621 (631)
.++|..||.+|+ ++.++++
T Consensus 233 ~~~L~~dp~~R~~~~r~t~~~il~ 256 (316)
T d1fota_ 233 SRLITRDLSQRLGNLQNGTEDVKN 256 (316)
T ss_dssp HHHTCSCTTTCTTSSTTTTHHHHT
T ss_pred HHHhhhCHHhccccchhhHHHHHc
Confidence 999999999985 7777653
|
| >d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.94 E-value=7e-28 Score=250.03 Aligned_cols=193 Identities=19% Similarity=0.247 Sum_probs=147.4
Q ss_pred CCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCC-CHHHHHHHHHHHHHHhc-----------------------
Q 042825 418 NNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSV-TEQGIAQFESEITVLTK----------------------- 472 (631)
Q Consensus 418 ~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~-~~~~~~~~~~Ei~~l~~----------------------- 472 (631)
++|+..+.||+|+||+||+|+.+ +|+.||||++..... .....+.+.+|+++|..
T Consensus 41 d~y~i~~~lG~G~fg~Vy~a~~~~~g~~~AvK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~v~ 120 (350)
T d1rdqe_ 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 120 (350)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cCeEEEEEeecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHHcCCCcEeeccccccccccccccc
Confidence 57999999999999999999975 699999999975321 11235678999999976
Q ss_pred -----CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCC
Q 042825 473 -----GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENG 523 (631)
Q Consensus 473 -----gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~ 523 (631)
|++..++.. ...++..+...++.+++.| +.+||+|||+|+.+..
T Consensus 121 e~~~~g~l~~~l~~-----~~~l~e~~~~~i~~qi~~aL~yLH~~~iiHRDIKP~NILl~~~g~ikL~DFG~a~~~~~-- 193 (350)
T d1rdqe_ 121 EYVAGGEMFSHLRR-----IGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-- 193 (350)
T ss_dssp ECCTTCBHHHHHHH-----HCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECSS--
T ss_pred ccccccchhhhHhh-----cCCCCHHHHHHHHHHHHHHHHHHHhCCEecCcCCHHHcccCCCCCEEeeeceeeeeccc--
Confidence 666666643 1357888888888888877 5789999999998742
Q ss_pred ccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHH-HhHhhhcCChhHHHHH
Q 042825 524 KHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLAT-WFQKMHKNHDTFQMAI 602 (631)
Q Consensus 524 ~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~-~~~~~~~~~~~l~~~i 602 (631)
......||+.|||||++.+..|+.++||||+||++|||+||+.||.+..... ....+.. ........++++.++|
T Consensus 194 ---~~~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~-~~~~i~~~~~~~p~~~s~~~~~li 269 (350)
T d1rdqe_ 194 ---RTWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ-IYEKIVSGKVRFPSHFSSDLKDLL 269 (350)
T ss_dssp ---CBCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHCCCCCCTTCCHHHHHHH
T ss_pred ---ccccccCccccCCHHHHcCCCCCccccccchhHHHHHHHhCCCCCCCcCHHH-HHHHHhcCCCCCCccCCHHHHHHH
Confidence 1345689999999999999999999999999999999999999998653221 1111111 1112223457899999
Q ss_pred HhhcCCChhhHH-----hHHHHHH
Q 042825 603 DKTIQLDEENLA-----NVSTVAE 621 (631)
Q Consensus 603 d~~L~~d~~~r~-----~~~~vl~ 621 (631)
.+||..||.+|. ++.++++
T Consensus 270 ~~~L~~dP~kR~~~~r~t~~ell~ 293 (350)
T d1rdqe_ 270 RNLLQVDLTKRFGNLKNGVNDIKN 293 (350)
T ss_dssp HHHSCSCTTTCTTSSTTTTHHHHT
T ss_pred HHHhhhCHHhccccccccHHHHHc
Confidence 999999999884 7777764
|
| >d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Insulin-like growth factor 1 receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.94 E-value=4e-27 Score=240.34 Aligned_cols=210 Identities=20% Similarity=0.249 Sum_probs=159.1
Q ss_pred cCCcccceeecCCCceEEEEEEec------CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc------------------
Q 042825 417 TNNFSEENRLGRGGVGTVYKGELK------DGTEVGVKRMELGSVTEQGIAQFESEITVLTK------------------ 472 (631)
Q Consensus 417 t~~f~~~~~iG~G~fg~Vyk~~~~------~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~------------------ 472 (631)
.++|...+.||+|+||+||+|++. +++.||||+++... .......|.+|++++.+
T Consensus 19 ~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~~-~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~ 97 (308)
T d1p4oa_ 19 REKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAA-SMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQP 97 (308)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTS-CHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSSS
T ss_pred HHHeEEeeEEeeCCCeEEEEEEECCcccCCCCcEEEEEEECccc-ChHHHHHHHHHHHHHHHcCCCCEeeeeeEEecCCc
Confidence 467888999999999999999864 25789999997543 45566789999999987
Q ss_pred ----------CChhHHhHhhhh-----cCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEee
Q 042825 473 ----------GTLGRHLFNWEE-----EGLEPLEWNTRLNIALDVARG------------------------DDMRVADF 513 (631)
Q Consensus 473 ----------gsL~~~L~~~~~-----~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DF 513 (631)
|++.++++.... .....++|.++.+|+.++|+| ..+||+||
T Consensus 98 ~~lv~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~gl~~LH~~~ivHrDlk~~NiLld~~~~~Kl~DF 177 (308)
T d1p4oa_ 98 TLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDF 177 (308)
T ss_dssp CEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCSGGGEEECTTCCEEECCT
T ss_pred eeEEEeecCCCCHHHHHHhcccccccccccCCCCHHHHHHHHHHHHHHHHHHhhCCeeeceEcCCceeecCCceEEEeec
Confidence 788887764321 234568999999999999987 56799999
Q ss_pred ccccccCCCCccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCC-CCCCCCCCChHHHHHHHHHhHh--
Q 042825 514 GLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGR-KVVDATHSDPEYIIHLATWFQK-- 590 (631)
Q Consensus 514 Gla~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~-~P~~~~~~~~~~~~~l~~~~~~-- 590 (631)
|+|+.+.............||+.|+|||.+.+..++.++|||||||++|||+||+ .||.+....+ ....+.+....
T Consensus 178 Gla~~~~~~~~~~~~~~~~~t~~y~aPe~l~~~~~~~~~Dv~S~G~il~El~t~~~~p~~~~~~~~-~~~~i~~~~~~~~ 256 (308)
T d1p4oa_ 178 GMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQ-VLRFVMEGGLLDK 256 (308)
T ss_dssp TCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHH-HHHHHHTTCCCCC
T ss_pred ccceeccCCcceeeccceecccccCCHHHHccCCCCcccccccHHHHHHHHHhCCCCCCCCCCHHH-HHHHHHhCCCCCC
Confidence 9999875433333445567999999999999999999999999999999999985 6666543221 11112111111
Q ss_pred hhcCChhHHHHHHhhcCCChhhHHhHHHHHHHHHhhhc
Q 042825 591 MHKNHDTFQMAIDKTIQLDEENLANVSTVAELGDHCCA 628 (631)
Q Consensus 591 ~~~~~~~l~~~id~~L~~d~~~r~~~~~vl~lal~C~~ 628 (631)
....++.+.+++.+|+..+|.+||++.++++......+
T Consensus 257 p~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~~~~ 294 (308)
T d1p4oa_ 257 PDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEME 294 (308)
T ss_dssp CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSC
T ss_pred cccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcC
Confidence 11224689999999999999999999999986555444
|
| >d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Carboxyl-terminal src kinase (csk) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.94 E-value=1.1e-27 Score=238.38 Aligned_cols=188 Identities=23% Similarity=0.327 Sum_probs=141.6
Q ss_pred CCcccceeecCCCceEEEEEEecCCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc-------------------------
Q 042825 418 NNFSEENRLGRGGVGTVYKGELKDGTEVGVKRMELGSVTEQGIAQFESEITVLTK------------------------- 472 (631)
Q Consensus 418 ~~f~~~~~iG~G~fg~Vyk~~~~~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~------------------------- 472 (631)
++|+..+.||+|+||.||+|+++ |+.||||+++... ..++|.+|++++++
T Consensus 7 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~vAvK~i~~~~----~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~e 81 (262)
T d1byga_ 7 KELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA----TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTE 81 (262)
T ss_dssp GGEEEEEEEEECSSCEEEEEEET-TEEEEEEECCCCC------HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEEC
T ss_pred HHeEEeEEEecCCCeEEEEEEEC-CeEEEEEEECcHH----HHHHHHHHHHHHHhCCCCCEeeEEEEEEecCCcEEEEEe
Confidence 46778899999999999999985 7899999997543 34679999999987
Q ss_pred ----CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCCc
Q 042825 473 ----GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENGK 524 (631)
Q Consensus 473 ----gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~~ 524 (631)
|+|.++++.. ....++|..+++|+.++|.| +.+|++|||+++....
T Consensus 82 y~~~g~L~~~l~~~---~~~~l~~~~~~~i~~~i~~al~ylH~~~ivH~dlkp~Nil~~~~~~~kl~dfg~s~~~~~--- 155 (262)
T d1byga_ 82 YMAKGSLVDYLRSR---GRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASS--- 155 (262)
T ss_dssp CCTTEEHHHHHHHH---HHHHCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTSCEEECCCCC---------
T ss_pred ccCCCCHHHHHHhc---CCCCCCHHHHHHHHHHHHhhccccccCceeccccchHhheecCCCCEeecccccceecCC---
Confidence 6777777532 22358999999999999988 5678999999987632
Q ss_pred cccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChHHHHHHHHHhHhh------hcCChh
Q 042825 525 HSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT-GRKVVDATHSDPEYIIHLATWFQKM------HKNHDT 597 (631)
Q Consensus 525 ~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~Ellt-G~~P~~~~~~~~~~~~~l~~~~~~~------~~~~~~ 597 (631)
......+|..|+|||++.+..++.++|||||||++|||+| |+.||....... +..++... ...+++
T Consensus 156 --~~~~~~~~~~y~aPE~l~~~~~t~~sDIwSfG~il~el~t~~~~p~~~~~~~~-----~~~~i~~~~~~~~~~~~~~~ 228 (262)
T d1byga_ 156 --TQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD-----VVPRVEKGYKMDAPDGCPPA 228 (262)
T ss_dssp --------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGG-----HHHHHTTTCCCCCCTTCCHH
T ss_pred --CCccccccccCCChHHHhCCCCChHHHHHhHHHHHHHHHHCCCCCCCCCCHHH-----HHHHHHcCCCCCCCccCCHH
Confidence 1234568999999999999999999999999999999999 688877654332 22222211 112468
Q ss_pred HHHHHHhhcCCChhhHHhHHHHHHHH
Q 042825 598 FQMAIDKTIQLDEENLANVSTVAELG 623 (631)
Q Consensus 598 l~~~id~~L~~d~~~r~~~~~vl~la 623 (631)
+.+++.+|+..||.+||++.++++..
T Consensus 229 ~~~li~~cl~~dP~~Rps~~~l~~~L 254 (262)
T d1byga_ 229 VYEVMKNCWHLDAAMRPSFLQLREQL 254 (262)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred HHHHHHHHcccCHhHCcCHHHHHHHH
Confidence 99999999999999999999988753
|
| >d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]
Probab=99.94 E-value=3.9e-27 Score=244.38 Aligned_cols=195 Identities=16% Similarity=0.200 Sum_probs=150.7
Q ss_pred cCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc-----------------------
Q 042825 417 TNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK----------------------- 472 (631)
Q Consensus 417 t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~----------------------- 472 (631)
.++|+..+.||+|+||+||+|+.. +|+.||||++.... ....+.+.+|+++|.+
T Consensus 28 ~d~Y~i~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~--~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivm 105 (352)
T d1koba_ 28 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPY--PLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLIL 105 (352)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS--HHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEE
T ss_pred ccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEECCcc--hhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence 457999999999999999999965 69999999997653 3445678999999987
Q ss_pred -----CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC--------------------------CCcEEEeeccccccCC
Q 042825 473 -----GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG--------------------------DDMRVADFGLVRLVPE 521 (631)
Q Consensus 473 -----gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g--------------------------~~~kl~DFGla~~~~~ 521 (631)
|+|.+++. .....++......|+.+++.| +.+||+|||+|+.+..
T Consensus 106 E~~~gg~L~~~~~----~~~~~l~e~~~~~i~~qi~~aL~ylH~~~iiHRDiKp~NILl~~~~~~~vkL~DFGla~~~~~ 181 (352)
T d1koba_ 106 EFLSGGELFDRIA----AEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNP 181 (352)
T ss_dssp ECCCCCBHHHHTT----CTTCCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCT
T ss_pred EcCCCChHHHHHH----hcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccccccccccccCCCeEEEeecccceecCC
Confidence 56655542 233468888888888888876 4679999999998753
Q ss_pred CCccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHH----hHhh-hcCCh
Q 042825 522 NGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATW----FQKM-HKNHD 596 (631)
Q Consensus 522 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~----~~~~-~~~~~ 596 (631)
.. ......||+.|||||++.+..|+.++||||+||++|||+||+.||.+..... ....+..- .... ...++
T Consensus 182 ~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~-~~~~i~~~~~~~~~~~~~~~s~ 257 (352)
T d1koba_ 182 DE---IVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLE-TLQNVKRCDWEFDEDAFSSVSP 257 (352)
T ss_dssp TS---CEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHH-HHHHHHHCCCCCCSSTTTTSCH
T ss_pred CC---ceeeccCcccccCHHHHcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHhCCCCCCcccccCCCH
Confidence 22 2345679999999999999999999999999999999999999998653221 11111110 0001 12357
Q ss_pred hHHHHHHhhcCCChhhHHhHHHHHH
Q 042825 597 TFQMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 597 ~l~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
++.++|.+||..||.+|+++.++++
T Consensus 258 ~~~~li~~~L~~dp~~R~s~~eil~ 282 (352)
T d1koba_ 258 EAKDFIKNLLQKEPRKRLTVHDALE 282 (352)
T ss_dssp HHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred HHHHHHHHHccCChhHCcCHHHHhc
Confidence 8999999999999999999999875
|
| >d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Mycobacterial protein kinase PknB, catalytic domain species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.94 E-value=7.4e-27 Score=234.81 Aligned_cols=200 Identities=20% Similarity=0.279 Sum_probs=141.7
Q ss_pred cCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCC-CHHHHHHHHHHHHHHhc----------------------
Q 042825 417 TNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSV-TEQGIAQFESEITVLTK---------------------- 472 (631)
Q Consensus 417 t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~-~~~~~~~~~~Ei~~l~~---------------------- 472 (631)
.++|+..+.||+|+||+||+|+.. +|+.||||+++.... .....++|.+|++++.+
T Consensus 6 ~drY~i~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~~l~~~~hpniv~~~~~~~~~~~~~~~ 85 (277)
T d1o6ya_ 6 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPL 85 (277)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTTTCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEECSSSEE
T ss_pred cceeEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhcCCCCCCcccceeeeccCCCce
Confidence 467999999999999999999964 699999999986544 34456789999999977
Q ss_pred ----------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccc
Q 042825 473 ----------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRL 518 (631)
Q Consensus 473 ----------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~ 518 (631)
|+|.+++.. ...+++.....|+.+++.| +..+|+|||.++.
T Consensus 86 ~~lvmE~~~g~~L~~~~~~-----~~~l~~~~~~~i~~qi~~al~~lH~~~iiHrDiKP~NIll~~~~~~~l~d~~~~~~ 160 (277)
T d1o6ya_ 86 PYIVMEYVDGVTLRDIVHT-----EGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARA 160 (277)
T ss_dssp EEEEEECCCEEEHHHHHHH-----HCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTSCEEECCCTTCEE
T ss_pred EEEEEECCCCCEehhhhcc-----cCCCCHHHHHHHHHHHHHHHHHHHhCCccCccccCcccccCccccceeehhhhhhh
Confidence 333333321 2468999999999999887 4567999999876
Q ss_pred cCCCCc-cccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHhH----hhhc
Q 042825 519 VPENGK-HSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQ----KMHK 593 (631)
Q Consensus 519 ~~~~~~-~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~~----~~~~ 593 (631)
...... .......+||+.|||||++.+..|+.++||||+||++|||+||+.||.+....+.....+..... ....
T Consensus 161 ~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (277)
T d1o6ya_ 161 IADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEG 240 (277)
T ss_dssp CC----------------TTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCCCCCGGGTSSS
T ss_pred hccccccccccccccCcccccCHHHHcCCCCCcceecccchHHHHHHHhCCCCCCCcCHHHHHHHHHhcCCCCCchhccC
Confidence 532221 12344578999999999999999999999999999999999999999865432211122221111 0112
Q ss_pred CChhHHHHHHhhcCCChhhHH-hHHHHHH
Q 042825 594 NHDTFQMAIDKTIQLDEENLA-NVSTVAE 621 (631)
Q Consensus 594 ~~~~l~~~id~~L~~d~~~r~-~~~~vl~ 621 (631)
.++++.++|.+||..||.+|+ ++.++++
T Consensus 241 ~s~~l~~li~~~L~~dp~~R~~sa~~l~~ 269 (277)
T d1o6ya_ 241 LSADLDAVVLKALAKNPENRYQTAAEMRA 269 (277)
T ss_dssp CCHHHHHHHHHHTCSSGGGSCSSHHHHHH
T ss_pred CCHHHHHHHHHHccCCHhHCHhHHHHHHH
Confidence 357899999999999999998 6766543
|
| >d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-KIT receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.93 E-value=1.7e-26 Score=236.01 Aligned_cols=205 Identities=21% Similarity=0.297 Sum_probs=154.7
Q ss_pred cCCcccceeecCCCceEEEEEEec------CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc------------------
Q 042825 417 TNNFSEENRLGRGGVGTVYKGELK------DGTEVGVKRMELGSVTEQGIAQFESEITVLTK------------------ 472 (631)
Q Consensus 417 t~~f~~~~~iG~G~fg~Vyk~~~~------~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~------------------ 472 (631)
.++|+..+.||+|+||.||+|++. +++.||||+++... ......+|.+|+.++.+
T Consensus 22 ~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~~-~~~~~~~~~~E~~~~~~l~~HpnIv~~~g~~~~~~ 100 (311)
T d1t46a_ 22 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSA-HLTEREALMSELKVLSYLGNHMNIVNLLGACTIGG 100 (311)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC-CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred HHHeEEeeEEeecCCeEEEEEEEeccccCCCCeEEEEEEECccc-CHHHHHHHHHHHHHHHhccCCCCEEEEEEEEeeCC
Confidence 467888999999999999999852 46789999997654 34556789999988875
Q ss_pred -----------CChhHHhHhhhh-------------cCCCCCCHHHHHHHHHHhhcC-----------------------
Q 042825 473 -----------GTLGRHLFNWEE-------------EGLEPLEWNTRLNIALDVARG----------------------- 505 (631)
Q Consensus 473 -----------gsL~~~L~~~~~-------------~~~~~L~~~~~~~I~~~ia~g----------------------- 505 (631)
|++.++++.... .....+++..+.+++.++|+|
T Consensus 101 ~~~lvmE~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~~LH~~~ivHrDLKp~NIl~~~ 180 (311)
T d1t46a_ 101 PTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTH 180 (311)
T ss_dssp SCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEET
T ss_pred EEEEEEEcCCCCCHHHHHHhccccccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCeeecccccccccccc
Confidence 677777754221 123468999999999999988
Q ss_pred -CCcEEEeeccccccCCCCccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChHHHHH
Q 042825 506 -DDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT-GRKVVDATHSDPEYIIH 583 (631)
Q Consensus 506 -~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~Ellt-G~~P~~~~~~~~~~~~~ 583 (631)
+.+|++|||+++...............||+.|+|||++....++.++|||||||++|||+| |++||......+. ...
T Consensus 181 ~~~~ki~DfG~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwS~G~~l~ellt~g~p~~~~~~~~~~-~~~ 259 (311)
T d1t46a_ 181 GRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSK-FYK 259 (311)
T ss_dssp TTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHH-HHH
T ss_pred cCcccccccchheeccCCCcceEeeecccChHHcCHHHhcCCCCCCcccccchHHHHHHHHhCCCCCCCCCCHHHH-HHH
Confidence 4568999999998764444444556789999999999999999999999999999999999 5555655444432 222
Q ss_pred HHHH-hHhhh--cCChhHHHHHHhhcCCChhhHHhHHHHHHHH
Q 042825 584 LATW-FQKMH--KNHDTFQMAIDKTIQLDEENLANVSTVAELG 623 (631)
Q Consensus 584 l~~~-~~~~~--~~~~~l~~~id~~L~~d~~~r~~~~~vl~la 623 (631)
+... .+... ..++++.+++..|+..||.+||++.++++..
T Consensus 260 ~i~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~~il~~L 302 (311)
T d1t46a_ 260 MIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLI 302 (311)
T ss_dssp HHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred HHhcCCCCCCcccccHHHHHHHHHHcCCChhHCcCHHHHHHHH
Confidence 2222 11111 2247899999999999999999999988753
|
| >d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase C, theta type species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.93 E-value=2.7e-27 Score=242.55 Aligned_cols=192 Identities=20% Similarity=0.302 Sum_probs=143.7
Q ss_pred CCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCC-CHHHHHHHHHHHHHHhc-----------------------
Q 042825 418 NNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSV-TEQGIAQFESEITVLTK----------------------- 472 (631)
Q Consensus 418 ~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~-~~~~~~~~~~Ei~~l~~----------------------- 472 (631)
++|...+.||+|+||+||+|+.+ +|+.||||+++.... .....+.+..|+.++.+
T Consensus 2 ddy~i~~~iG~G~fg~Vy~~~~~~t~~~vAvK~i~k~~~~~~~~~~~~~~e~~~l~~~~~hp~Iv~~~~~~~~~~~~yiv 81 (320)
T d1xjda_ 2 EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFV 81 (320)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEE
T ss_pred CCeEEeeEEecCCCcEEEEEEECCCCCEEEEEEEchhhccChHHHHHHHHHHHHHHHhCCCCcEEEEEEEEccCCceeEE
Confidence 67999999999999999999976 599999999975321 11234567777766543
Q ss_pred ------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCC
Q 042825 473 ------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPEN 522 (631)
Q Consensus 473 ------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~ 522 (631)
|+|.+++.. ...++..+...++.+++.| +.+||+|||+|+.....
T Consensus 82 mEy~~~g~L~~~i~~-----~~~~~e~~~~~~~~qi~~al~ylH~~~iiHrDikp~NiL~~~~~~~kl~DFG~a~~~~~~ 156 (320)
T d1xjda_ 82 MEYLNGGDLMYHIQS-----CHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLG 156 (320)
T ss_dssp EECCTTCBHHHHHHH-----HSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCT
T ss_pred EeecCCCcHHHHhhc-----cCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCcccceeecCCCceeccccchhhhcccc
Confidence 788887753 1346777778888888776 56899999999876422
Q ss_pred CccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHhHh-hhcCChhHHHH
Q 042825 523 GKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQK-MHKNHDTFQMA 601 (631)
Q Consensus 523 ~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~~~-~~~~~~~l~~~ 601 (631)
........||+.|+|||++.+..|+.++||||+||++|||+||+.||.+..... ....+...... ....++++.++
T Consensus 157 --~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~PF~~~~~~~-~~~~i~~~~~~~p~~~s~~~~dl 233 (320)
T d1xjda_ 157 --DAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEE-LFHSIRMDNPFYPRWLEKEAKDL 233 (320)
T ss_dssp --TCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHCCCCCCTTSCHHHHHH
T ss_pred --cccccccCCCCCcCCHHHHcCCCCCchhhhhhhhHHHHHHHhCCCCCCCCCHHH-HHHHHHcCCCCCCccCCHHHHHH
Confidence 223455789999999999999999999999999999999999999998654321 11112111111 11235789999
Q ss_pred HHhhcCCChhhHHhHH
Q 042825 602 IDKTIQLDEENLANVS 617 (631)
Q Consensus 602 id~~L~~d~~~r~~~~ 617 (631)
|.+||..||.+|+++.
T Consensus 234 i~~~L~~dP~~R~s~~ 249 (320)
T d1xjda_ 234 LVKLFVREPEKRLGVR 249 (320)
T ss_dssp HHHHSCSSGGGSBTTB
T ss_pred HHHhcccCCCCCcCHH
Confidence 9999999999999874
|
| >d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Activated CDC42 kinase 1, ACK1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.93 E-value=2.9e-27 Score=237.04 Aligned_cols=201 Identities=21% Similarity=0.338 Sum_probs=139.6
Q ss_pred CCcccceeecCCCceEEEEEEecC--C--cEEEEEEEecCCC-CHHHHHHHHHHHHHHhc--------------------
Q 042825 418 NNFSEENRLGRGGVGTVYKGELKD--G--TEVGVKRMELGSV-TEQGIAQFESEITVLTK-------------------- 472 (631)
Q Consensus 418 ~~f~~~~~iG~G~fg~Vyk~~~~~--g--~~vAvK~l~~~~~-~~~~~~~~~~Ei~~l~~-------------------- 472 (631)
++|+..+.||+|+||+||+|++.. + ..||||++..... .....++|.+|+++|.+
T Consensus 8 ~d~~~~~~iG~G~fg~Vy~~~~~~~~~~~~~vAiK~l~~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~~~g~~~~~~~~l 87 (273)
T d1u46a_ 8 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKM 87 (273)
T ss_dssp GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCEE
T ss_pred HHeEEEEEEecCCCeEEEEEEEECCCCcEEEEEEEEEChhhcCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeecchhe
Confidence 468889999999999999998642 2 3789999876543 23446789999999976
Q ss_pred -------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCC
Q 042825 473 -------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPE 521 (631)
Q Consensus 473 -------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~ 521 (631)
|++.+++.. ....++|..+++++.++|+| ..+||+|||+++.+..
T Consensus 88 v~e~~~~~~l~~~~~~----~~~~l~~~~~~~~~~qi~~gl~ylH~~~iiHrDikp~NIll~~~~~vkl~DfGl~~~~~~ 163 (273)
T d1u46a_ 88 VTELAPLGSLLDRLRK----HQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQ 163 (273)
T ss_dssp EEECCTTCBHHHHHHH----HGGGSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETTEEEECCCTTCEECCC
T ss_pred eeeeecCcchhhhhhc----ccCCCCHHHHHHHHHHHHHHHHHhhhCCEeeeeecHHHhccccccceeeccchhhhhccc
Confidence 555555432 12458999999999999988 4578999999998754
Q ss_pred CCccc-cccccccCcccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChHHHHHHHHHhHh---hhcCCh
Q 042825 522 NGKHS-ILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT-GRKVVDATHSDPEYIIHLATWFQK---MHKNHD 596 (631)
Q Consensus 522 ~~~~~-~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~Ellt-G~~P~~~~~~~~~~~~~l~~~~~~---~~~~~~ 596 (631)
..... ......||..|+|||++.+..++.++|||||||++|||+| |+.||.+....+ ....+...-.. ....++
T Consensus 164 ~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~S~Gvil~emlt~G~~Pf~~~~~~~-~~~~i~~~~~~~~~~~~~~~ 242 (273)
T d1u46a_ 164 NDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQ-ILHKIDKEGERLPRPEDCPQ 242 (273)
T ss_dssp -CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH-HHHHHHTSCCCCCCCTTCCH
T ss_pred CCCcceecCccccCcccCCHHHHhCCCCCcchhhhhhHHHHHHHHhCCCCCCCCcCHHH-HHHHHHhCCCCCCCcccccH
Confidence 33222 2334568899999999999999999999999999999998 899998653321 11111111111 112246
Q ss_pred hHHHHHHhhcCCChhhHHhHHHHHHHH
Q 042825 597 TFQMAIDKTIQLDEENLANVSTVAELG 623 (631)
Q Consensus 597 ~l~~~id~~L~~d~~~r~~~~~vl~la 623 (631)
++.+++.+|+..||.+||++.++.+.-
T Consensus 243 ~l~~li~~cl~~dp~~RPt~~ei~~~L 269 (273)
T d1u46a_ 243 DIYNVMVQCWAHKPEDRPTFVALRDFL 269 (273)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred HHHHHHHHHcCCChhHCcCHHHHHHHH
Confidence 899999999999999999999987753
|
| >d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tie2 kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.93 E-value=7e-27 Score=238.71 Aligned_cols=206 Identities=22% Similarity=0.253 Sum_probs=148.3
Q ss_pred CCcccceeecCCCceEEEEEEecC-Cc--EEEEEEEecCCCCHHHHHHHHHHHHHHhc----------------------
Q 042825 418 NNFSEENRLGRGGVGTVYKGELKD-GT--EVGVKRMELGSVTEQGIAQFESEITVLTK---------------------- 472 (631)
Q Consensus 418 ~~f~~~~~iG~G~fg~Vyk~~~~~-g~--~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~---------------------- 472 (631)
++|+..++||+|+||+||+|++++ |. .||||++.... .....++|.+|+++|.+
T Consensus 10 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~i 88 (309)
T d1fvra_ 10 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYA-SKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYL 88 (309)
T ss_dssp GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC-------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEE
T ss_pred HHcEEEEEEeeCCCcEEEEEEECCCCeEEEEEEEEECccc-ChHHHHHHHHHHHHHHhccCCCCEeeEEEEEecCCeeEE
Confidence 578888999999999999999763 44 57888886433 23356789999999975
Q ss_pred -------CChhHHhHhhh-----------hcCCCCCCHHHHHHHHHHhhcC------------------------CCcEE
Q 042825 473 -------GTLGRHLFNWE-----------EEGLEPLEWNTRLNIALDVARG------------------------DDMRV 510 (631)
Q Consensus 473 -------gsL~~~L~~~~-----------~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl 510 (631)
|+|.++++... ......++|.++.+++.|+|+| ..+||
T Consensus 89 V~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~~lH~~~iiHrDlkp~NIL~~~~~~~kl 168 (309)
T d1fvra_ 89 AIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKI 168 (309)
T ss_dssp EECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGGGCEEE
T ss_pred EEEecCCCcHHHHHhhccccccchhhhccccccCCCCHHHHHHHHHHHHHHHHhhhcCCccccccccceEEEcCCCceEE
Confidence 78888876421 2234679999999999999988 45789
Q ss_pred EeeccccccCCCCccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCC-CCCCCCCChHHHHHHHHHhH
Q 042825 511 ADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRK-VVDATHSDPEYIIHLATWFQ 589 (631)
Q Consensus 511 ~DFGla~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~-P~~~~~~~~~~~~~l~~~~~ 589 (631)
+|||+|+..... .......||..|+|||.+....|+.++|||||||++|||++|.. ||.+.... .....+....+
T Consensus 169 ~DfG~a~~~~~~---~~~~~~~gt~~y~aPE~l~~~~~~~~sDvwSfGvil~ell~~~~~p~~~~~~~-~~~~~i~~~~~ 244 (309)
T d1fvra_ 169 ADFGLSRGQEVY---VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA-ELYEKLPQGYR 244 (309)
T ss_dssp CCTTCEESSCEE---CCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHH-HHHHHGGGTCC
T ss_pred cccccccccccc---ccccceecCCcccchHHhccCCCCccceeehhHHHHHHHHhcCCCCCCCCCHH-HHHHHHHhcCC
Confidence 999999865321 12234578999999999999999999999999999999999765 66644321 11111222111
Q ss_pred hh--hcCChhHHHHHHhhcCCChhhHHhHHHHHHHHHhhhc
Q 042825 590 KM--HKNHDTFQMAIDKTIQLDEENLANVSTVAELGDHCCA 628 (631)
Q Consensus 590 ~~--~~~~~~l~~~id~~L~~d~~~r~~~~~vl~lal~C~~ 628 (631)
.. ...++++.+++.+|+..||++||++.++++.--.+.+
T Consensus 245 ~~~~~~~~~~~~~li~~cl~~dP~~RPs~~eil~~L~~i~~ 285 (309)
T d1fvra_ 245 LEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLE 285 (309)
T ss_dssp CCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHh
Confidence 11 1224789999999999999999999999876444443
|
| >d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Hepatocyte growth factor receptor, c-MET species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.93 E-value=1.9e-26 Score=235.37 Aligned_cols=195 Identities=23% Similarity=0.290 Sum_probs=145.7
Q ss_pred ceeecCCCceEEEEEEecC----CcEEEEEEEecCCCCHHHHHHHHHHHHHHhc--------------------------
Q 042825 423 ENRLGRGGVGTVYKGELKD----GTEVGVKRMELGSVTEQGIAQFESEITVLTK-------------------------- 472 (631)
Q Consensus 423 ~~~iG~G~fg~Vyk~~~~~----g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~-------------------------- 472 (631)
.++||+|+||+||+|++.+ ...||||+++.. ......++|.+|+++|.+
T Consensus 32 ~~~iG~G~fg~Vyk~~~~~~~~~~~~vAvK~~~~~-~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~E~ 110 (311)
T d1r0pa_ 32 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI-TDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPY 110 (311)
T ss_dssp EEEEEEETTEEEEEEEECC----CEEEEEEEECCC-CCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEETTTEEEEEEEC
T ss_pred ceEEeecCCeEEEEEEEECCCCEEEEEEEEEECcc-cCHHHHHHHHHHHHHHHhCCCCCEeEEeEEEEecCCceEEEEEE
Confidence 4689999999999999754 236899999753 345667889999999987
Q ss_pred ---CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCCcc
Q 042825 473 ---GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENGKH 525 (631)
Q Consensus 473 ---gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~~~ 525 (631)
|++.++++ .....+.+..+++++.++|+| +.+||+|||+++.+......
T Consensus 111 ~~~g~l~~~~~----~~~~~~~~~~~~~i~~qia~gL~~lH~~~iiHrDLK~~NILl~~~~~~kL~DFG~~~~~~~~~~~ 186 (311)
T d1r0pa_ 111 MKHGDLRNFIR----NETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFD 186 (311)
T ss_dssp CTTCBHHHHHH----CTTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEECSSGGGCCTTTTTCC
T ss_pred eecCchhhhhc----cccccchHHHHHHHHHHHHHhhhhhcccCcccCCccHHhEeECCCCCEEEecccchhhccccccc
Confidence 55555543 334567888999999999987 56799999999987533221
Q ss_pred --ccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHhHhh------hcCChh
Q 042825 526 --SILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQKM------HKNHDT 597 (631)
Q Consensus 526 --~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~~~~------~~~~~~ 597 (631)
.......||+.|+|||.+.+..++.++|||||||++|||+||+.||...... ..+..++... ...+++
T Consensus 187 ~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDI~SfGivl~El~t~~~p~~~~~~~----~~~~~~i~~g~~~~~p~~~~~~ 262 (311)
T d1r0pa_ 187 SVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT----FDITVYLLQGRRLLQPEYCPDP 262 (311)
T ss_dssp CTTCTTCSSCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCC----------CHHHHHTTCCCCCCTTCCHH
T ss_pred cceecccccccccccChHHHhcCCCCChhHhhhhHHHHHHHHHCCCCCCCCCCH----HHHHHHHHcCCCCCCcccCcHH
Confidence 2233467999999999999999999999999999999999988887643322 1122222111 112468
Q ss_pred HHHHHHhhcCCChhhHHhHHHHHHHHHhh
Q 042825 598 FQMAIDKTIQLDEENLANVSTVAELGDHC 626 (631)
Q Consensus 598 l~~~id~~L~~d~~~r~~~~~vl~lal~C 626 (631)
+.+++.+|+..||++||++.++++---..
T Consensus 263 l~~li~~cl~~dP~~RPs~~ei~~~L~~i 291 (311)
T d1r0pa_ 263 LYEVMLKCWHPKAEMRPSFSELVSRISAI 291 (311)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCHhHCcCHHHHHHHHHHH
Confidence 99999999999999999999998764443
|
| >d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: gamma-subunit of glycogen phosphorylase kinase (Phk) species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.93 E-value=2.1e-26 Score=231.05 Aligned_cols=196 Identities=20% Similarity=0.222 Sum_probs=150.4
Q ss_pred cCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCH-------HHHHHHHHHHHHHhc----------------
Q 042825 417 TNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTE-------QGIAQFESEITVLTK---------------- 472 (631)
Q Consensus 417 t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~-------~~~~~~~~Ei~~l~~---------------- 472 (631)
.++|+..+.||+|+||+||+|+.. +|+.||||++....... ...+++.+|+.++.+
T Consensus 2 ~~~y~~~~~iG~G~~g~V~~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~ 81 (277)
T d1phka_ 2 YENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYET 81 (277)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEC
T ss_pred cccCEEceEEecCcCeEEEEEEECCCCCEEEEEEEecccccchhHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeeccc
Confidence 368999999999999999999965 69999999997654321 234568899998865
Q ss_pred -------------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeecc
Q 042825 473 -------------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGL 515 (631)
Q Consensus 473 -------------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGl 515 (631)
|+|.+++.. ...+++.....++.+++.| +.+||+|||+
T Consensus 82 ~~~~~ivmE~~~~g~L~~~l~~-----~~~l~e~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~~~~~~kl~DFG~ 156 (277)
T d1phka_ 82 NTFFFLVFDLMKKGELFDYLTE-----KVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGF 156 (277)
T ss_dssp SSEEEEEEECCTTCBHHHHHHH-----HSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTT
T ss_pred CcceEEEEEcCCCchHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHcCCcccccccceEEEcCCCCeEEccchh
Confidence 788888753 2368999999999998887 5679999999
Q ss_pred ccccCCCCccccccccccCccccccccccc------CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHh-
Q 042825 516 VRLVPENGKHSILTKVAGTFGYLAPEYIVT------GRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWF- 588 (631)
Q Consensus 516 a~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~------~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~- 588 (631)
++.+.... ......||..|+|||++.+ ..++.++||||+||++|||+||+.||.+...... ...+...-
T Consensus 157 a~~~~~~~---~~~~~~gt~~y~~PE~~~~~~~~~~~~~~~~~DiwslGvilyeml~g~~Pf~~~~~~~~-~~~i~~~~~ 232 (277)
T d1phka_ 157 SCQLDPGE---KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLM-LRMIMSGNY 232 (277)
T ss_dssp CEECCTTC---CBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HHHHHHTCC
T ss_pred eeEccCCC---ceeeeeccCCCCCHHHhhccccccCCCCCchheEcccchhhhhhccCCCCCCCCCHHHH-HHHHHhCCC
Confidence 99874322 2345789999999999863 3478999999999999999999999986543221 11122111
Q ss_pred ---H-hhhcCChhHHHHHHhhcCCChhhHHhHHHHHH
Q 042825 589 ---Q-KMHKNHDTFQMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 589 ---~-~~~~~~~~l~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
. .....++++.+++.++|..||.+|+++.++++
T Consensus 233 ~~~~~~~~~~s~~~~~li~~~L~~~p~~R~s~~eil~ 269 (277)
T d1phka_ 233 QFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA 269 (277)
T ss_dssp CCCTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred CCCCcccccCCHHHHHHHHHHccCChhHCcCHHHHHc
Confidence 0 11134578999999999999999999998764
|
| >d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK6 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.93 E-value=1.8e-26 Score=235.34 Aligned_cols=199 Identities=20% Similarity=0.281 Sum_probs=143.1
Q ss_pred hcCCcccceeecCCCceEEEEEEec-C-CcEEEEEEEecCCCCHHHHHHHHHHHHHHhc---------------------
Q 042825 416 ATNNFSEENRLGRGGVGTVYKGELK-D-GTEVGVKRMELGSVTEQGIAQFESEITVLTK--------------------- 472 (631)
Q Consensus 416 ~t~~f~~~~~iG~G~fg~Vyk~~~~-~-g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~--------------------- 472 (631)
..++|+..+.||+|+||+||+|+.. + ++.||||+++...........+.+|+++++.
T Consensus 5 ~~~~Y~i~~~LG~G~fg~V~~a~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~~l~~l~~~~HpnIv~~~~~~~~~~~ 84 (305)
T d1blxa_ 5 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT 84 (305)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEEC
T ss_pred CcCCEEEEEEEecccCeEEEEEEEECCCCEEEEEEEEehhhccchHHHHHHHHHHHHHHHhhcCCCCcceeeeeeccccc
Confidence 4578999999999999999999964 4 6789999997543333223345667666543
Q ss_pred --------------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeec
Q 042825 473 --------------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFG 514 (631)
Q Consensus 473 --------------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFG 514 (631)
|....+. .......+++.....++.+++.| +.+||+|||
T Consensus 85 ~~~~~~~~~~e~~~~~~~~~~---~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~ivHrDiKp~NILi~~~~~~kl~dfg 161 (305)
T d1blxa_ 85 DRETKLTLVFEHVDQDLTTYL---DKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFG 161 (305)
T ss_dssp SSEEEEEEEEECCSCBHHHHH---HHSCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECSCC
T ss_pred ccCceEEEEEEeccCCchhhh---hhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEEecCCCccEEEEcCCCCeeecchh
Confidence 1111111 12234567888888888888877 567899999
Q ss_pred cccccCCCCccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHh------
Q 042825 515 LVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWF------ 588 (631)
Q Consensus 515 la~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~------ 588 (631)
+++... .........||+.|+|||++.+..|+.++||||+||++|||+||+.||.+....+ ....+....
T Consensus 162 ~~~~~~---~~~~~~~~~gT~~Y~APE~~~~~~y~~~~DiwSlG~il~ell~g~~pf~~~~~~~-~~~~i~~~~~~~~~~ 237 (305)
T d1blxa_ 162 LARIYS---FQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVD-QLGKILDVIGLPGEE 237 (305)
T ss_dssp SCCCCC---GGGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCCCCGG
T ss_pred hhhhhc---ccccCCCcccChhhcCcchhcCCCCChhehhhchHHHHHHHHHCCCCCCCCCHHH-HHHHHHHhhCCCchh
Confidence 998653 2234456789999999999999999999999999999999999999998653221 111121110
Q ss_pred ---H-------------------hhhcCChhHHHHHHhhcCCChhhHHhHHHHHH
Q 042825 589 ---Q-------------------KMHKNHDTFQMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 589 ---~-------------------~~~~~~~~l~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
. .....++.+.+++.+||+.||.+|+++.++++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~sa~e~L~ 292 (305)
T d1blxa_ 238 DWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 292 (305)
T ss_dssp GSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred cccccccchhhhhccccccchhhccccCCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence 0 00112457899999999999999999998865
|
| >d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.93 E-value=2.9e-26 Score=232.94 Aligned_cols=199 Identities=22% Similarity=0.347 Sum_probs=145.2
Q ss_pred CCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc------------------------
Q 042825 418 NNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK------------------------ 472 (631)
Q Consensus 418 ~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~------------------------ 472 (631)
++|+..+.||+|+||+||+|+.. +|+.||||+++.....+...+++.+|++++++
T Consensus 2 d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~Hp~Iv~~~~~~~~~~~~~iv~e 81 (298)
T d1gz8a_ 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE 81 (298)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEC-------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred CCCEeccEEecCcCeEEEEEEECCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEEeccccccccceeEEEe
Confidence 68999999999999999999964 69999999997654443445789999999987
Q ss_pred ---CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCCcc
Q 042825 473 ---GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENGKH 525 (631)
Q Consensus 473 ---gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~~~ 525 (631)
|.+...+. ......+++.....++.+++.| +.+||+|||+|+..... .
T Consensus 82 ~~~~~~~~~~~---~~~~~~l~e~~~~~~~~qil~~L~yLH~~~IiHrDiKpeNIl~~~~~~~kl~DFG~a~~~~~~--~ 156 (298)
T d1gz8a_ 82 FLHQDLKKFMD---ASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP--V 156 (298)
T ss_dssp CCSEEHHHHHH---HTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECSTTHHHHHCCC--S
T ss_pred ecCCchhhhhh---hhcccCCCHHHHHHHHHHHHHHHHHhhcCCEEccccCchheeecccCcceeccCCcceeccCC--c
Confidence 22223221 2334568999999999998887 56789999999877422 2
Q ss_pred ccccccccCcccccccccccCC-CCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHH--------Hh--------
Q 042825 526 SILTKVAGTFGYLAPEYIVTGR-ITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLAT--------WF-------- 588 (631)
Q Consensus 526 ~~~~~~~gt~~Y~aPE~~~~~~-~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~--------~~-------- 588 (631)
.......||+.|+|||.+.... ++.++||||+||++|||++|+.||.+....+........ |.
T Consensus 157 ~~~~~~~gt~~y~apE~~~~~~~~~~~~DiwSlGvily~m~~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 236 (298)
T d1gz8a_ 157 RTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 236 (298)
T ss_dssp BCTTCCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTC
T ss_pred ccceeecccceeeehhhhccccCCCccccccccchhhhHHhhCCCCCCCCCHHHHHHHHHHhcCCCchhhcccccccccc
Confidence 3345568999999999887665 578999999999999999999999865322111111100 00
Q ss_pred -------------HhhhcCChhHHHHHHhhcCCChhhHHhHHHHHH
Q 042825 589 -------------QKMHKNHDTFQMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 589 -------------~~~~~~~~~l~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
......+.++.+++.+||..||.+|+++.++++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~t~~ell~ 282 (298)
T d1gz8a_ 237 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 282 (298)
T ss_dssp CTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred ccccccccccchhhhccCCCHHHHHHHHHHccCChhHCcCHHHHhC
Confidence 001122467899999999999999999999875
|
| >d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase activated protein kinase 2, mapkap2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.93 E-value=2e-26 Score=237.60 Aligned_cols=191 Identities=17% Similarity=0.233 Sum_probs=143.4
Q ss_pred cCCcccce-eecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc----------------------
Q 042825 417 TNNFSEEN-RLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK---------------------- 472 (631)
Q Consensus 417 t~~f~~~~-~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~---------------------- 472 (631)
.++|.... +||+|+||+||+|+.. +|+.||||+++.. ..+.+|++++.+
T Consensus 10 ~~~y~i~~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~-------~~~~~E~~~~~~~~~hpnIv~l~~~~~~~~~~~~ 82 (335)
T d2ozaa1 10 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-------PKARREVELHWRASQCPHIVRIVDVYENLYAGRK 82 (335)
T ss_dssp GGTEEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECS-------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEE
T ss_pred ccCEEEeeEEeeeccCeEEEEEEECCCCCEEEEEEECCc-------HHHHHHHHHHHHhcCCCCCCeEEEEEeecccCCC
Confidence 46788764 6999999999999964 6999999999743 345667766543
Q ss_pred -----------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC---------------------------CCcEEEeec
Q 042825 473 -----------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG---------------------------DDMRVADFG 514 (631)
Q Consensus 473 -----------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g---------------------------~~~kl~DFG 514 (631)
|+|.+++.. .+...+++.+...|+.+++.| +.+||+|||
T Consensus 83 ~~~ivmEy~~gg~L~~~i~~---~~~~~l~e~~~~~i~~qi~~al~ylH~~~iiHRDiKp~NIll~~~~~~~~~Kl~DFG 159 (335)
T d2ozaa1 83 CLLIVMECLDGGELFSRIQD---RGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFG 159 (335)
T ss_dssp EEEEEEECCCSEEHHHHHHS---CSCCCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCSSTTCCEEECCCT
T ss_pred EEEEEEECCCCCcHHHHHHh---cCCCCcCHHHHHHHHHHHHHHHHHHHHcCCccccccccccccccccccccccccccc
Confidence 567776642 233568999999999888877 247999999
Q ss_pred cccccCCCCccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHh------
Q 042825 515 LVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWF------ 588 (631)
Q Consensus 515 la~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~------ 588 (631)
+|+...... .....+||+.|||||++.+..|+.++||||+||++|||+||+.||.+....... ..+....
T Consensus 160 ~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~y~~~~DiwSlGvily~lltg~~Pf~~~~~~~~~-~~~~~~i~~~~~~ 235 (335)
T d2ozaa1 160 FAKETTSHN---SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAIS-PGMKTRIRMGQYE 235 (335)
T ss_dssp TCEECCCCC---CCCCCSCCCSSCCCCCCCGGGGSHHHHHHHHHHHHHHHTTSSCSCEETTCC---------CCCSCSSS
T ss_pred eeeeccCCC---ccccccCCcccCCcHHHcCCCCCHHHHHHhhchhHHHHhhCCCCCCCCCHHHHH-HHHHHHHhcCCCC
Confidence 999774322 235578999999999999999999999999999999999999999765433211 1111110
Q ss_pred ---HhhhcCChhHHHHHHhhcCCChhhHHhHHHHHH
Q 042825 589 ---QKMHKNHDTFQMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 589 ---~~~~~~~~~l~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
......++++.++|.+||..||.+|+++.++++
T Consensus 236 ~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~ 271 (335)
T d2ozaa1 236 FPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMN 271 (335)
T ss_dssp CCTTHHHHSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred CCCcccccCCHHHHHHHHHHccCChhHCcCHHHHHc
Confidence 001123568999999999999999999999876
|
| >d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Titin, kinase domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.93 E-value=4.2e-26 Score=233.85 Aligned_cols=196 Identities=14% Similarity=0.168 Sum_probs=151.4
Q ss_pred hcCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc----------------------
Q 042825 416 ATNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK---------------------- 472 (631)
Q Consensus 416 ~t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~---------------------- 472 (631)
..++|...+.||+|+||+||+|+.. +|+.||||+++... .....+.+|+++|..
T Consensus 3 ~~~rY~i~~~lG~G~fg~Vy~~~~~~~~~~~AiK~i~~~~---~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~lv 79 (321)
T d1tkia_ 3 LYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG---TDQVLVKKEISILNIARHRNILHLHESFESMEELVMI 79 (321)
T ss_dssp CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT---HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEE
T ss_pred CccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEcCCc---ccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEE
Confidence 3578999999999999999999976 58999999997643 334568899999876
Q ss_pred ------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC--------------------------CCcEEEeeccccccC
Q 042825 473 ------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG--------------------------DDMRVADFGLVRLVP 520 (631)
Q Consensus 473 ------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g--------------------------~~~kl~DFGla~~~~ 520 (631)
|+|.+++. +....++..+...|+.+++.| ..+||+|||+++...
T Consensus 80 mE~~~gg~L~~~i~----~~~~~l~e~~~~~i~~qi~~al~yLH~~~iiHrDlKp~NIll~~~~~~~ikl~DFG~~~~~~ 155 (321)
T d1tkia_ 80 FEFISGLDIFERIN----TSAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLK 155 (321)
T ss_dssp ECCCCCCBHHHHHT----SSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCTTCEECC
T ss_pred EecCCCCcHHHHHH----hcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCcccccccceeecCCCceEEEEcccchhhccc
Confidence 56766663 223468888888898888877 357899999998764
Q ss_pred CCCccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHh----Hhh-hcCC
Q 042825 521 ENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWF----QKM-HKNH 595 (631)
Q Consensus 521 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~----~~~-~~~~ 595 (631)
... ......||+.|+|||...+..|+.++||||+||++|||++|+.||....... ....+...- ... ...+
T Consensus 156 ~~~---~~~~~~~t~~y~ape~~~~~~~~~~~DiWSlGvily~ll~G~~Pf~~~~~~~-~~~~i~~~~~~~~~~~~~~~s 231 (321)
T d1tkia_ 156 PGD---NFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQ-IIENIMNAEYTFDEEAFKEIS 231 (321)
T ss_dssp TTC---EEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHH-HHHHHHHTCCCCCHHHHTTSC
T ss_pred cCC---cccccccccccccchhccCCCCCchhhcccHHHHHHHHHhCCCCCCCCCHHH-HHHHHHhCCCCCChhhccCCC
Confidence 222 2344679999999999999999999999999999999999999998654321 111222211 111 1235
Q ss_pred hhHHHHHHhhcCCChhhHHhHHHHHHH
Q 042825 596 DTFQMAIDKTIQLDEENLANVSTVAEL 622 (631)
Q Consensus 596 ~~l~~~id~~L~~d~~~r~~~~~vl~l 622 (631)
+++.++|.+||..||.+|+++.++++-
T Consensus 232 ~~~~~li~~~L~~dp~~R~s~~eil~h 258 (321)
T d1tkia_ 232 IEAMDFVDRLLVKERKSRMTASEALQH 258 (321)
T ss_dssp HHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred HHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 789999999999999999999998863
|
| >d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: G-protein coupled receptor kinase 2 species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.93 E-value=5.1e-26 Score=237.11 Aligned_cols=194 Identities=21% Similarity=0.307 Sum_probs=141.5
Q ss_pred cCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCH-HHHHHHH---HHHHHHhc-------------------
Q 042825 417 TNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTE-QGIAQFE---SEITVLTK------------------- 472 (631)
Q Consensus 417 t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~-~~~~~~~---~Ei~~l~~------------------- 472 (631)
.++|+..++||+|+||+||+|+.. +|+.||||++....... .....+. .|+++++.
T Consensus 3 lddy~i~~~lG~G~fg~Vy~~~~~~t~~~vAiK~i~~~~~~~~~~~~~~~~e~~~~~~l~~~~hpnIv~l~~~~~~~~~~ 82 (364)
T d1omwa3 3 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKL 82 (364)
T ss_dssp STTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEE
T ss_pred HHhCeeeeEEecCCCeEEEEEEECCCCCEEEEEEEchHHcchhhHHHHHHHHHHHHHHHhcCCCCcEEEEEEEEEECCEE
Confidence 368999999999999999999976 59999999996532211 1122233 34555543
Q ss_pred ---------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeecccccc
Q 042825 473 ---------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLV 519 (631)
Q Consensus 473 ---------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~ 519 (631)
|+|.+++.. ...+.+.....++.+++.| +.+||+|||+|+..
T Consensus 83 ~ivmE~~~gg~L~~~l~~-----~~~~~e~~~~~~~~qi~~aL~ylH~~~iiHrDlKP~NILl~~~g~iKl~DFGla~~~ 157 (364)
T d1omwa3 83 SFILDLMNGGDLHYHLSQ-----HGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDF 157 (364)
T ss_dssp EEEECCCCSCBHHHHHHH-----HCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECSSSCEEECCCTTCEEC
T ss_pred EEEEEecCCCcHHHHHHh-----cccccHHHHHHHHHHHHHHHHHHHHCCccceeeccceeEEcCCCcEEEeeeceeeec
Confidence 777777743 1356777788888888776 56899999999976
Q ss_pred CCCCccccccccccCccccccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHhH-h----hhc
Q 042825 520 PENGKHSILTKVAGTFGYLAPEYIVT-GRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQ-K----MHK 593 (631)
Q Consensus 520 ~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~~-~----~~~ 593 (631)
... .....+||+.|||||++.. ..|+.++||||+||++|||+||+.||......... .+..... . ...
T Consensus 158 ~~~----~~~~~~GT~~y~APE~~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~--~~~~~~~~~~~~~~~~ 231 (364)
T d1omwa3 158 SKK----KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKH--EIDRMTLTMAVELPDS 231 (364)
T ss_dssp SSS----CCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCSSCSSCSSCHH--HHHHHSSSCCCCCCSS
T ss_pred CCC----cccccccccccchhHHhhcCCCCCcccchhHHHHHHHHHHhCCCCCCCCCHHHHH--HHHHhcccCCCCCCCC
Confidence 422 2345689999999999875 46899999999999999999999999865443221 1211111 0 112
Q ss_pred CChhHHHHHHhhcCCChhhHHh-----HHHHHH
Q 042825 594 NHDTFQMAIDKTIQLDEENLAN-----VSTVAE 621 (631)
Q Consensus 594 ~~~~l~~~id~~L~~d~~~r~~-----~~~vl~ 621 (631)
.+++++++|.+||..||.+|++ +.++++
T Consensus 232 ~s~~~~~li~~~L~~dP~~R~t~~~~~a~eil~ 264 (364)
T d1omwa3 232 FSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE 264 (364)
T ss_dssp SCHHHHHHHHHHTCSSTTTSTTTSSSTHHHHHT
T ss_pred CCHHHHHHHHHHcccCHHHhCCCcccCHHHHHc
Confidence 3578999999999999999998 566653
|
| >d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Proto-oncogene serine/threonine-protein kinase Pim-1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.93 E-value=4.9e-27 Score=235.53 Aligned_cols=189 Identities=21% Similarity=0.316 Sum_probs=139.9
Q ss_pred CCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCH----HHHHHHHHHHHHHhc--------------------
Q 042825 418 NNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTE----QGIAQFESEITVLTK-------------------- 472 (631)
Q Consensus 418 ~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~----~~~~~~~~Ei~~l~~-------------------- 472 (631)
++|+..++||+|+||+||+|+.. +|+.||||++....... ....++.+|++++++
T Consensus 4 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~~~h~nIv~~~~~~~~~~~ 83 (273)
T d1xwsa_ 4 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDS 83 (273)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSSE
T ss_pred CeEEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccchhhhhHHHHHHHHHHHHHHhccCCCCccEEEEEEeeCCe
Confidence 57999999999999999999965 69999999997543221 112346678888754
Q ss_pred -----------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC-------------------------CCcEEEeeccc
Q 042825 473 -----------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG-------------------------DDMRVADFGLV 516 (631)
Q Consensus 473 -----------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g-------------------------~~~kl~DFGla 516 (631)
+++.+++.. ...+++.....++.+++.| +.+||+|||+|
T Consensus 84 ~~lv~e~~~~~~~l~~~~~~-----~~~l~e~~~~~~~~qi~~al~~lH~~~iiHrDiKp~NIll~~~~~~vkl~DFG~a 158 (273)
T d1xwsa_ 84 FVLILERPEPVQDLFDFITE-----RGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSG 158 (273)
T ss_dssp EEEEEECCSSEEEHHHHHHH-----HCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTEEEECCCTTC
T ss_pred EEEEEEeccCcchHHHHHhc-----cCCCCHHHHHHHHHHHHHHHHHHHHCCCccccCcccceEEecCCCeEEECccccc
Confidence 122222211 2468888888888888877 35789999999
Q ss_pred cccCCCCccccccccccCcccccccccccCCC-CchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHhHhhhcCC
Q 042825 517 RLVPENGKHSILTKVAGTFGYLAPEYIVTGRI-TAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQKMHKNH 595 (631)
Q Consensus 517 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~-~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~~~~~~~~ 595 (631)
+..... ..+...||+.|+|||++.+..+ +.++||||+||++|||+||+.||.... . .+..-.......+
T Consensus 159 ~~~~~~----~~~~~~GT~~y~aPE~~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~----~--i~~~~~~~~~~~s 228 (273)
T d1xwsa_ 159 ALLKDT----VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE----E--IIRGQVFFRQRVS 228 (273)
T ss_dssp EECCSS----CBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH----H--HHHCCCCCSSCCC
T ss_pred eecccc----cccccccCCCcCCHHHHcCCCCCCcccccccceeeehhHhhCCCCCCCch----H--HhhcccCCCCCCC
Confidence 876422 2345789999999999987775 567999999999999999999997421 1 1111111112336
Q ss_pred hhHHHHHHhhcCCChhhHHhHHHHHH
Q 042825 596 DTFQMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 596 ~~l~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
+++.++|.+||..||.+|+++.++++
T Consensus 229 ~~~~~li~~~L~~dp~~R~s~~eil~ 254 (273)
T d1xwsa_ 229 SECQHLIRWCLALRPSDRPTFEEIQN 254 (273)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HHHHHHHHHHccCCHhHCcCHHHHhc
Confidence 78999999999999999999999875
|
| >d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: (Plasmodium falciparum) [TaxId: 5833]
Probab=99.93 E-value=3.1e-26 Score=231.38 Aligned_cols=197 Identities=21% Similarity=0.352 Sum_probs=144.2
Q ss_pred CCcccceeecCCCceEEEEEEecCCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc-------------------------
Q 042825 418 NNFSEENRLGRGGVGTVYKGELKDGTEVGVKRMELGSVTEQGIAQFESEITVLTK------------------------- 472 (631)
Q Consensus 418 ~~f~~~~~iG~G~fg~Vyk~~~~~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~------------------------- 472 (631)
++|+..+.||+|+||+||+|+.++|+.||||++..........+++.+|+.+|++
T Consensus 2 ~~Y~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~i~~e~ 81 (286)
T d1ob3a_ 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH 81 (286)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred CCceeccEEecCCCcEEEEEEeCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEeeeeecccCCceeEEEEe
Confidence 6899999999999999999999999999999997665444446789999999987
Q ss_pred --CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCCccc
Q 042825 473 --GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENGKHS 526 (631)
Q Consensus 473 --gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~~~~ 526 (631)
+.+...+ ......++......|+.+++.| +.+|++|||+|...... ..
T Consensus 82 ~~~~~~~~~----~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~IvHrDiKp~NIll~~~~~~kl~DfG~a~~~~~~--~~ 155 (286)
T d1ob3a_ 82 LDQDLKKLL----DVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIP--VR 155 (286)
T ss_dssp CSEEHHHHH----HTSTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC-----
T ss_pred ehhhhHHHH----HhhcCCcchhhhHHHHHHHHHHHHHhccCcEEecCCCCceeeEcCCCCEEecccccceecccC--cc
Confidence 2222222 1234568999999999998887 56789999999876422 12
Q ss_pred cccccccCcccccccccccC-CCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHH---------Hh--------
Q 042825 527 ILTKVAGTFGYLAPEYIVTG-RITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLAT---------WF-------- 588 (631)
Q Consensus 527 ~~~~~~gt~~Y~aPE~~~~~-~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~---------~~-------- 588 (631)
......|++.|+|||.+... .++.++||||+||++|||++|+.||.+....+. ...+.. |.
T Consensus 156 ~~~~~~~~~~y~~pE~~~~~~~~~~~~DiwslGv~l~el~~G~~pf~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~ 234 (286)
T d1ob3a_ 156 KYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQ-LMRIFRILGTPNSKNWPNVTELPKY 234 (286)
T ss_dssp ------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-HHHHHHHHCCCCTTTSTTGGGSTTC
T ss_pred ccceecccchhhhHHHHhCCCCCCcceeehhcCcHHHHHHHCCCCCCCCCHHHH-HHHHHHhhCCCChhhccchhhhhhc
Confidence 23445789999999998765 479999999999999999999999986532211 111111 00
Q ss_pred -------------HhhhcCChhHHHHHHhhcCCChhhHHhHHHHHH
Q 042825 589 -------------QKMHKNHDTFQMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 589 -------------~~~~~~~~~l~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
......++++.++|++||+.||++|+++.++++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~ell~ 280 (286)
T d1ob3a_ 235 DPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE 280 (286)
T ss_dssp CTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred ccccccccCcchhhhcccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 000112457889999999999999999998864
|
| >d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 7, CDK7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.92 E-value=4.7e-26 Score=231.54 Aligned_cols=193 Identities=20% Similarity=0.223 Sum_probs=135.0
Q ss_pred cceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCH---HHHHHHHHHHHHHhc-------------------------
Q 042825 422 EENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTE---QGIAQFESEITVLTK------------------------- 472 (631)
Q Consensus 422 ~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~---~~~~~~~~Ei~~l~~------------------------- 472 (631)
..++||+|+||+||+|+.+ +|+.||||+++...... ...+.+.+|++++++
T Consensus 2 ~l~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~~~~~~~~~ivmE~ 81 (299)
T d1ua2a_ 2 KLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDF 81 (299)
T ss_dssp EEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCEEEEEC
T ss_pred cceEeccCcCeEEEEEEECCCCcEEEEEEEehhhhhhhhHHHHHHHHHHHHHHHhCCCCCEeEEEeeeccCCceeehhhh
Confidence 4689999999999999975 59999999987543221 123568899999876
Q ss_pred --CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCCccc
Q 042825 473 --GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENGKHS 526 (631)
Q Consensus 473 --gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~~~~ 526 (631)
|.....+ ......+++.....++.+++.| +.+||+|||+|+...... .
T Consensus 82 ~~~~~~~~~----~~~~~~l~~~~~~~~~~qil~aL~~lH~~~iiHrDiKp~NIli~~~~~~KL~DFG~a~~~~~~~--~ 155 (299)
T d1ua2a_ 82 METDLEVII----KDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPN--R 155 (299)
T ss_dssp CSEEHHHHH----TTCCSSCCSSHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCCGGGSTTTSCC--C
T ss_pred hcchHHhhh----hhcccCCCHHHHHHHHHHHHHHHHHhhccceecccCCcceEEecCCCccccccCccccccCCCc--c
Confidence 1111111 1223456777777777777766 567999999998764322 2
Q ss_pred cccccccCcccccccccccC-CCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHh-----------------
Q 042825 527 ILTKVAGTFGYLAPEYIVTG-RITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWF----------------- 588 (631)
Q Consensus 527 ~~~~~~gt~~Y~aPE~~~~~-~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~----------------- 588 (631)
.....+||+.|+|||++... .|+.++||||+||++|||+||+.||.+....+ ....+.+..
T Consensus 156 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~-~l~~i~~~~~~~~~~~~~~~~~~~~~ 234 (299)
T d1ua2a_ 156 AYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLD-QLTRIFETLGTPTEEQWPDMCSLPDY 234 (299)
T ss_dssp CCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHHHCCCCTTTSSSTTSSTTC
T ss_pred cccceecChhhccHHHHccCCCCChhhhhhhcchHHHHHHhCcCCCCCCCHHH-HHHHHHHhcCCCChhhccchhccchh
Confidence 33456899999999998754 58999999999999999999999998643221 111121110
Q ss_pred ------------HhhhcCChhHHHHHHhhcCCChhhHHhHHHHHH
Q 042825 589 ------------QKMHKNHDTFQMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 589 ------------~~~~~~~~~l~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
......++++.+++.+||+.||++|+++.++++
T Consensus 235 ~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~dP~~R~sa~e~L~ 279 (299)
T d1ua2a_ 235 VTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALK 279 (299)
T ss_dssp CCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred hhhccCCCCChHHhcccCCHHHHHHHHHHccCChhhCcCHHHHhC
Confidence 001123468899999999999999999999875
|
| >d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.92 E-value=1.5e-25 Score=227.75 Aligned_cols=197 Identities=17% Similarity=0.188 Sum_probs=144.4
Q ss_pred CCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc------------------------
Q 042825 418 NNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK------------------------ 472 (631)
Q Consensus 418 ~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~------------------------ 472 (631)
++|+..+.||+|+||+||+|+.. +|+.||||++..... ..++.+|++++..
T Consensus 7 ~rY~l~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~----~~~~~~E~~i~~~l~~~~~i~~~~~~~~~~~~~~ivm 82 (299)
T d1ckia_ 7 NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK----HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVM 82 (299)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEESCTT----SCCHHHHHHHHHHSTTSTTCCCEEEEEEETTEEEEEE
T ss_pred CEEEEeEEEeeCCCcEEEEEEECCCCCEEEEEEEchhcc----CHHHHHHHHHHHHccCCCcccEEEEEEecCCEEEEEE
Confidence 56999999999999999999965 689999999876432 2346778888765
Q ss_pred ----CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC---------------------------CCcEEEeeccccccCC
Q 042825 473 ----GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG---------------------------DDMRVADFGLVRLVPE 521 (631)
Q Consensus 473 ----gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g---------------------------~~~kl~DFGla~~~~~ 521 (631)
+++...+. .....+++.....++.+++.| ..+||+|||+|+.+..
T Consensus 83 e~~~~~l~~~~~----~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDiKp~NIl~~~~~~~~~vkl~DFG~a~~~~~ 158 (299)
T d1ckia_ 83 ELLGPSLEDLFN----FCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRD 158 (299)
T ss_dssp ECCCCBHHHHHH----HTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECCGGGTTCEEECCCSSCEECBC
T ss_pred EEcCCchhhhhh----hccCCCcHHHHHHHHHHHHHHHHHHHHCCeeeccCCHhhccccccCCCceeeeeccCcceeccc
Confidence 34433332 233568999999999998877 2478999999998753
Q ss_pred CCcc-----ccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHhH-------
Q 042825 522 NGKH-----SILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQ------- 589 (631)
Q Consensus 522 ~~~~-----~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~~------- 589 (631)
.... .......||+.|||||.+.+..++.++|||||||++|||+||+.||.......... ....+..
T Consensus 159 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~~l~el~tg~~P~~~~~~~~~~~-~~~~~~~~~~~~~~ 237 (299)
T d1ckia_ 159 ARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQ-KYERISEKKMSTPI 237 (299)
T ss_dssp TTTCCBCCCCBCCSCCCCSSSCCHHHHTTBCCCHHHHHHHHHHHHHHHHHSSCTTCCCC--------HHHHHHHHHHSCH
T ss_pred cccccceeccccCCcCCCccccCHHHHhCCCCCChhhEEecCHHHHHHHhCCCcccccchHHHHH-HHHHhhcccCCCCh
Confidence 2221 12345689999999999999999999999999999999999999997654332111 1111111
Q ss_pred -hh-hcCChhHHHHHHhhcCCChhhHHhHHHHHHHH
Q 042825 590 -KM-HKNHDTFQMAIDKTIQLDEENLANVSTVAELG 623 (631)
Q Consensus 590 -~~-~~~~~~l~~~id~~L~~d~~~r~~~~~vl~la 623 (631)
.. ...++++.+++..|+..+|.+||++.++.++-
T Consensus 238 ~~~~~~~p~~~~~li~~cl~~~p~~RP~~~~i~~~l 273 (299)
T d1ckia_ 238 EVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLF 273 (299)
T ss_dssp HHHTTTSCHHHHHHHHHHHHSCTTCCCCHHHHHHHH
T ss_pred hHhccCCCHHHHHHHHHHccCChhHCcCHHHHHHHH
Confidence 11 12346789999999999999999887766543
|
| >d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fibroblast growth factor receptor 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.92 E-value=1.1e-25 Score=228.70 Aligned_cols=204 Identities=24% Similarity=0.301 Sum_probs=149.9
Q ss_pred cCCcccceeecCCCceEEEEEEecC--------CcEEEEEEEecCCCCHHHHHHHHHHHHHHhc----------------
Q 042825 417 TNNFSEENRLGRGGVGTVYKGELKD--------GTEVGVKRMELGSVTEQGIAQFESEITVLTK---------------- 472 (631)
Q Consensus 417 t~~f~~~~~iG~G~fg~Vyk~~~~~--------g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~---------------- 472 (631)
.++|...+.||+|+||.||+|+... +..||||+++... ......++.+|...+.+
T Consensus 12 ~~~~~l~~~iG~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~-~~~~~~~~~~e~~~l~~~~~HpnIv~~~~~~~~ 90 (299)
T d1fgka_ 12 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDA-TEKDLSDLISEMEMMKMIGKHKNIINLLGACTQ 90 (299)
T ss_dssp GGGEEEEEECC-----CEEEEEEECC----CCCEEEEEEECCCTTC-CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred HHHeEEeeEEeecCCcEEEEEEEcCCCcccccCceEEEEEEECccc-ChHHHHHHHHHHHHHHHhcCCCeEEeccccccc
Confidence 3578889999999999999998532 3579999997643 44566788888877754
Q ss_pred -------------CChhHHhHhhhh-----------cCCCCCCHHHHHHHHHHhhcC-----------------------
Q 042825 473 -------------GTLGRHLFNWEE-----------EGLEPLEWNTRLNIALDVARG----------------------- 505 (631)
Q Consensus 473 -------------gsL~~~L~~~~~-----------~~~~~L~~~~~~~I~~~ia~g----------------------- 505 (631)
|++.+++..... .....+++..++.++.++|.|
T Consensus 91 ~~~~~~v~e~~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~ylH~~~ivHrDiKp~NiLl~~ 170 (299)
T d1fgka_ 91 DGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTE 170 (299)
T ss_dssp SSSCEEEECCCTTCBHHHHHHTTSCC------------CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECT
T ss_pred CCeEEEEEEccCCCcHHHHHHhhcCCccccccccccCccccCCHHHHHHHHHHHHHHHHHhhhCCEEeeeecccceeecC
Confidence 788888754211 123468999999999999988
Q ss_pred -CCcEEEeeccccccCCCCccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCChHHHHH
Q 042825 506 -DDMRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLIT-GRKVVDATHSDPEYIIH 583 (631)
Q Consensus 506 -~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~Ellt-G~~P~~~~~~~~~~~~~ 583 (631)
+.+||+|||+++...............||+.|+|||++.++.|+.|+|||||||++|||+| |+.||.+.... .
T Consensus 171 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~y~~k~DiwS~Gvvl~ell~~g~~p~~~~~~~-----~ 245 (299)
T d1fgka_ 171 DNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVE-----E 245 (299)
T ss_dssp TCCEEECSTTCCCCGGGCCTTCCCTTSCCGGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH-----H
T ss_pred CCCeEeccchhhccccccccccccccCCCChhhhhhhHhcCCCCCchhhhHHhHHHHHHhccCCCCCCCCCCHH-----H
Confidence 5678999999998754433333455789999999999999999999999999999999998 68888754322 1
Q ss_pred HHHHhHhh------hcCChhHHHHHHhhcCCChhhHHhHHHHHHHHHhh
Q 042825 584 LATWFQKM------HKNHDTFQMAIDKTIQLDEENLANVSTVAELGDHC 626 (631)
Q Consensus 584 l~~~~~~~------~~~~~~l~~~id~~L~~d~~~r~~~~~vl~lal~C 626 (631)
+...+... ...++++.+++.+|+..||.+||++.++++.--+.
T Consensus 246 ~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~dP~~Rps~~eil~~L~~i 294 (299)
T d1fgka_ 246 LFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 294 (299)
T ss_dssp HHHHHHTTCCCCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred HHHHHHcCCCCCCCccchHHHHHHHHHHccCCHhHCcCHHHHHHHHHHH
Confidence 22222111 12247899999999999999999999988755443
|
| >d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase Erk2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.92 E-value=4.8e-25 Score=228.58 Aligned_cols=199 Identities=20% Similarity=0.317 Sum_probs=145.1
Q ss_pred hcCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc----------------------
Q 042825 416 ATNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK---------------------- 472 (631)
Q Consensus 416 ~t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~---------------------- 472 (631)
.+++|+..+.||+|+||+||+|+.. +|+.||||++.... .....+++.+|+++|.+
T Consensus 6 i~~rY~~~~~LG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~-~~~~~~~~~~Ei~il~~l~hp~iv~~~~~~~~~~~~~~~ 84 (345)
T d1pmea_ 6 VGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFE-HQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMK 84 (345)
T ss_dssp CCTTEEEEEECC---CCCEEEEEETTTCSEEEEEEECCTT-CHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCC
T ss_pred cCCCeEEEEEEeeccCeEEEEEEECCCCcEEEEEEEehhc-ChHHHHHHHHHHHHHHHcCCCCCCcEEEEEeeccccccc
Confidence 3467999999999999999999864 79999999997543 34456789999999977
Q ss_pred ----------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccc
Q 042825 473 ----------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRL 518 (631)
Q Consensus 473 ----------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~ 518 (631)
|+|.+++.. ..+++.....++.+++.| +.+||+|||+|+.
T Consensus 85 ~~~l~~~~~~g~L~~~l~~------~~l~~~~i~~i~~qil~al~yLH~~~iiHRDIKp~NILl~~~~~~kl~DfG~a~~ 158 (345)
T d1pmea_ 85 DVYLVTHLMGADLYKLLKT------QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARV 158 (345)
T ss_dssp CEEEEEECCCEEHHHHHHH------CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred eEEEEEeecCCchhhhhhc------CCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCCcceEEECCCCCEEEcccCceee
Confidence 455555431 358888888899888877 5679999999987
Q ss_pred cCCCCc-cccccccccCccccccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHH----------
Q 042825 519 VPENGK-HSILTKVAGTFGYLAPEYIVT-GRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLAT---------- 586 (631)
Q Consensus 519 ~~~~~~-~~~~~~~~gt~~Y~aPE~~~~-~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~---------- 586 (631)
...... .......+||+.|+|||++.. ..++.++||||+||++|||++|+.||...............
T Consensus 159 ~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~eml~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (345)
T d1pmea_ 159 ADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLN 238 (345)
T ss_dssp CCGGGCBCCTTCCCCSCGGGCCGGGTTTBCSCSTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHH
T ss_pred ccCCCccceeeccccccceechHHHhhcCCCCCchhhhhccCceehHHhhCCCCCCCCCHHHHHHHHhhhccCCChhhhh
Confidence 642211 122355789999999999855 45789999999999999999999999864322111111100
Q ss_pred ---------------------HhHhhhcCChhHHHHHHhhcCCChhhHHhHHHHHH
Q 042825 587 ---------------------WFQKMHKNHDTFQMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 587 ---------------------~~~~~~~~~~~l~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
|.......+.++.+++.+||..||.+|+++.++++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~ta~e~L~ 294 (345)
T d1pmea_ 239 CIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA 294 (345)
T ss_dssp TCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred hhhhhhhhcccccCCccCCCCHHHhCCCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 00111122457899999999999999999999875
|
| >d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Type I TGF-beta receptor R4 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.92 E-value=3.3e-25 Score=225.39 Aligned_cols=198 Identities=16% Similarity=0.229 Sum_probs=136.7
Q ss_pred CCcccceeecCCCceEEEEEEecCCcEEEEEEEecCCCCHHHHHHHHHHHHHHh--c-----------------------
Q 042825 418 NNFSEENRLGRGGVGTVYKGELKDGTEVGVKRMELGSVTEQGIAQFESEITVLT--K----------------------- 472 (631)
Q Consensus 418 ~~f~~~~~iG~G~fg~Vyk~~~~~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~--~----------------------- 472 (631)
.+|...+.||+|+||+||+|++ +|+.||||+++.. ..+++.+|.+++. +
T Consensus 3 ~~~~l~~~iG~G~fg~Vy~~~~-~g~~vAvK~~~~~-----~~~~~~~e~ei~~~~~~~HpnIv~~~~~~~~~~~~~~~~ 76 (303)
T d1vjya_ 3 RTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR-----EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQL 76 (303)
T ss_dssp GGEEEEEEEECCSSSEEEEEEE-TTEEEEEEEECGG-----GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEE
T ss_pred cEEEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECcc-----chhHHHHHHHHHHHhhCCCCcCcceEEEEEeCCCcceEE
Confidence 3566788999999999999997 5899999998643 2344445554442 2
Q ss_pred ---------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC--------------------------------CCcEEE
Q 042825 473 ---------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG--------------------------------DDMRVA 511 (631)
Q Consensus 473 ---------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g--------------------------------~~~kl~ 511 (631)
|+|.++++. ..++|..+..++.++|.| +.+||+
T Consensus 77 ~lv~Ey~~~g~L~~~l~~------~~l~~~~~~~~~~~ia~gl~~lH~~~~~~~~~~~IvHrDlKp~NILl~~~~~~Kl~ 150 (303)
T d1vjya_ 77 WLVSDYHEHGSLFDYLNR------YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIA 150 (303)
T ss_dssp EEEEECCTTCBHHHHHHH------CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCCGGGEEECTTSCEEEC
T ss_pred EEEEecccCCCHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCeeccccCccceEEcCCCCeEEE
Confidence 677777753 358999999999998865 567999
Q ss_pred eeccccccCCCCcc--ccccccccCcccccccccccC------CCCchhhHHHHHHHHHHHHcCCCCCCCCCCCh-----
Q 042825 512 DFGLVRLVPENGKH--SILTKVAGTFGYLAPEYIVTG------RITAKVDVYSFGMILMDLITGRKVVDATHSDP----- 578 (631)
Q Consensus 512 DFGla~~~~~~~~~--~~~~~~~gt~~Y~aPE~~~~~------~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~----- 578 (631)
|||+++........ .......||++|||||++... .++.|+|||||||+||||+||..|+.......
T Consensus 151 DFGl~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~k~Di~S~Gvvl~el~tg~~~~~~~~~~~~~~~~ 230 (303)
T d1vjya_ 151 DLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYD 230 (303)
T ss_dssp CCTTCEEEETTTTEECC----CCSCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTT
T ss_pred ecCccccccCCCcceeccccceecccCcCChhhccccccccCCCcCcchhhhhhHHHHHHHhhCCCCCCcccccccchhh
Confidence 99999987533222 123457899999999998654 26789999999999999999988874321110
Q ss_pred -----HHHHHHHHHh-Hh--------hhcC---ChhHHHHHHhhcCCChhhHHhHHHHHHHHHhhh
Q 042825 579 -----EYIIHLATWF-QK--------MHKN---HDTFQMAIDKTIQLDEENLANVSTVAELGDHCC 627 (631)
Q Consensus 579 -----~~~~~l~~~~-~~--------~~~~---~~~l~~~id~~L~~d~~~r~~~~~vl~lal~C~ 627 (631)
.....+..-. .. .... ...+.+++.+|+..||.+||++.++++.-..+.
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ei~~~L~~i~ 296 (303)
T d1vjya_ 231 LVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLS 296 (303)
T ss_dssp TSCSSCCHHHHHHHHTTSCCCCCCCGGGGGCHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHH
T ss_pred cccccchHHHHHHHHhccccCCCCCcccCChHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHH
Confidence 0001111111 00 0000 124789999999999999999999887554443
|
| >d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 9, CDK9 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.92 E-value=2.2e-25 Score=228.61 Aligned_cols=205 Identities=17% Similarity=0.228 Sum_probs=142.1
Q ss_pred cCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhcCChhH------------------
Q 042825 417 TNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTKGTLGR------------------ 477 (631)
Q Consensus 417 t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~gsL~~------------------ 477 (631)
.++|+..+.||+|+||+||+|+.. +|+.||||++......+...+++.+|+++|++-+...
T Consensus 9 ~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~nii~~~~~~~~~~~~~~~~ 88 (318)
T d3blha1 9 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRC 88 (318)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC----CTTSSCHHHHHHHHHHHHCCCTTBCCEEEEEEC--------
T ss_pred cCCEEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHHhcCCCccceEeeeeccccccccc
Confidence 468999999999999999999975 6999999998765544445677899999997711000
Q ss_pred --Hh-----------HhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccC
Q 042825 478 --HL-----------FNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVP 520 (631)
Q Consensus 478 --~L-----------~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~ 520 (631)
++ ..........+.......|+.+++.| +.+||+|||+++...
T Consensus 89 ~~~~~iv~e~~~~~~~~~~~~~~~~~~~~~~~~i~~qil~~l~~lH~~~ivHrDlKp~NILl~~~~~~kl~dfg~~~~~~ 168 (318)
T d3blha1 89 KGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFS 168 (318)
T ss_dssp --CEEEEEECCCEEHHHHHTCTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCTTCEECC
T ss_pred CceEEEEEeccCCCccchhhhcccccccHHHHHHHHHHHHHHHHhccCCEEecCcCchheeecCCCcEEeeecceeeecc
Confidence 00 00111223456777777888888776 567899999998764
Q ss_pred CCCcc--ccccccccCcccccccccccC-CCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHhHh-------
Q 042825 521 ENGKH--SILTKVAGTFGYLAPEYIVTG-RITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQK------- 590 (631)
Q Consensus 521 ~~~~~--~~~~~~~gt~~Y~aPE~~~~~-~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~~~------- 590 (631)
..... ......+||+.|+|||++.+. .|+.++||||+||++|||++|+.||++..... ....+......
T Consensus 169 ~~~~~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~k~DiwSlGvil~el~~g~~pf~~~~~~~-~~~~i~~~~~~~~~~~~~ 247 (318)
T d3blha1 169 LAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQH-QLALISQLCGSITPEVWP 247 (318)
T ss_dssp C-----CCCCCSCCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCCCCTTTST
T ss_pred cccccccccccceecCHHHhhHHHHcCCCCCCcHHHcccCCceeeeHhhCCCCCCCCCHHH-HHHHHHHhcCCCChhhcc
Confidence 22211 122346799999999998765 58999999999999999999999998643221 11111111100
Q ss_pred --------------------------hhcCChhHHHHHHhhcCCChhhHHhHHHHHHH
Q 042825 591 --------------------------MHKNHDTFQMAIDKTIQLDEENLANVSTVAEL 622 (631)
Q Consensus 591 --------------------------~~~~~~~l~~~id~~L~~d~~~r~~~~~vl~l 622 (631)
....++++.+++.+||+.||++|+++.++++-
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~sa~elL~H 305 (318)
T d3blha1 248 NVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNH 305 (318)
T ss_dssp TCCCC-------CCSSCCBCHHHHHHHHHCCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred ccchhhhhhhhcccccccccchhhhccccCCHHHHHHHHHHCcCChhHCcCHHHHHcC
Confidence 01123567889999999999999999998864
|
| >d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Probab=99.91 E-value=4.1e-24 Score=216.23 Aligned_cols=202 Identities=14% Similarity=0.155 Sum_probs=142.7
Q ss_pred CCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc------------------------
Q 042825 418 NNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK------------------------ 472 (631)
Q Consensus 418 ~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~------------------------ 472 (631)
++|+..+.||+|+||+||+|+.. +|+.||||++....... ..++..+++..+.+
T Consensus 5 ~~Y~i~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~~-~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~~vme~~ 83 (293)
T d1csna_ 5 VHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDAP-QLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDLL 83 (293)
T ss_dssp TTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTTSC-CHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEECC
T ss_pred CceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEccccCcH-HHHHHHHHHHHhcCCCCCCEEEEEeecCCccEEEEEec
Confidence 57999999999999999999965 68999999986543222 22222334444433
Q ss_pred -CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC-----------------------------CCcEEEeeccccccCCC
Q 042825 473 -GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG-----------------------------DDMRVADFGLVRLVPEN 522 (631)
Q Consensus 473 -gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g-----------------------------~~~kl~DFGla~~~~~~ 522 (631)
++|.+++.. ....+++.....++.+++.| +.+||+|||+|+.....
T Consensus 84 ~~~l~~~~~~----~~~~~~~~~~~~i~~q~~~~l~~lH~~giiHrDiKp~Nili~~~~~~~~~~vkl~DFG~a~~~~~~ 159 (293)
T d1csna_ 84 GPSLEDLLDL----CGRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDP 159 (293)
T ss_dssp CCBHHHHHHH----TTTCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCT
T ss_pred CCCHHHHHHh----hccchhhHHHHHHHHHHHHHHHHHHHCCceeccCCccceeecCcccccCCceEEcccceeEEcccC
Confidence 566655532 23468888888898888876 24789999999976432
Q ss_pred Ccc-----ccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHH--HHHHHHh-----Hh
Q 042825 523 GKH-----SILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYI--IHLATWF-----QK 590 (631)
Q Consensus 523 ~~~-----~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~--~~l~~~~-----~~ 590 (631)
... ......+||+.|||||++.+..++.++|||||||++|||+||+.||.+........ ..+.... +.
T Consensus 160 ~~~~~~~~~~~~~~~GT~~y~aPE~~~~~~~~~~~DiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~ 239 (293)
T d1csna_ 160 VTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPLRE 239 (293)
T ss_dssp TTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHSCHHH
T ss_pred ccccceeecccCceEEchhhcCHHHhcCCCCChHHHHHHhhHHHHHHHhCCCcCCCccchhHHHHHHHHHhccCCCChHH
Confidence 111 12335689999999999999999999999999999999999999998654432211 1111111 11
Q ss_pred h-hcCChhHHHHHHhhcCCChhhHHhHHHHHHHHH
Q 042825 591 M-HKNHDTFQMAIDKTIQLDEENLANVSTVAELGD 624 (631)
Q Consensus 591 ~-~~~~~~l~~~id~~L~~d~~~r~~~~~vl~lal 624 (631)
. ...++++.+++..++..+|.+||....+.++..
T Consensus 240 l~~~~p~~l~~ii~~~~~~~~~~rP~y~~l~~~l~ 274 (293)
T d1csna_ 240 LCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFS 274 (293)
T ss_dssp HTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHH
T ss_pred hcCCCCHHHHHHHHHHhcCCcccCcCHHHHHHHHH
Confidence 1 123467999999999889999987766655443
|
| >d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK5 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.91 E-value=2.3e-24 Score=218.06 Aligned_cols=197 Identities=16% Similarity=0.229 Sum_probs=146.0
Q ss_pred CCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc------------------------
Q 042825 418 NNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK------------------------ 472 (631)
Q Consensus 418 ~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~------------------------ 472 (631)
++|+..+.||+|+||+||+|+.. +|+.||||+++.........+++.+|+.++++
T Consensus 2 ~ry~~i~~LG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~iv~~ 81 (292)
T d1unla_ 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE 81 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred CCCEeeeEEecCcCeEEEEEEECCCCcEEEEEEEehhhCChHHHHHHHHHHHHHHhcCcCCEEeeccccccccceeEEee
Confidence 57999999999999999999965 68999999998766555667889999999987
Q ss_pred ----CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCCc
Q 042825 473 ----GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENGK 524 (631)
Q Consensus 473 ----gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~~ 524 (631)
+++..++ .....+.+.....++.+++.| +++||+|||.|+......
T Consensus 82 ~~~~~~l~~~~-----~~~~~~~~~~~~~~~~q~~~aL~~lH~~~IvHrDiKP~NIli~~~~~~kl~DFG~a~~~~~~~- 155 (292)
T d1unla_ 82 FCDQDLKKYFD-----SCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPV- 155 (292)
T ss_dssp CCSEEHHHHHH-----HTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSCC-
T ss_pred ecccccccccc-----ccccccchhHHHHHHHHHHHHHHHhhcCCEeeecccCcccccccCCceeeeecchhhcccCCC-
Confidence 2222222 223467788888888888876 567899999999874322
Q ss_pred cccccccccCcccccccccccCC-CCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHhHh-------------
Q 042825 525 HSILTKVAGTFGYLAPEYIVTGR-ITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQK------------- 590 (631)
Q Consensus 525 ~~~~~~~~gt~~Y~aPE~~~~~~-~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~~~------------- 590 (631)
.......++..|+|||.+.... ++.++||||+||++|||++|+.||............+......
T Consensus 156 -~~~~~~~~~~~~~~pe~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (292)
T d1unla_ 156 -RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLP 234 (292)
T ss_dssp -SCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGST
T ss_pred -ccceeeccccchhhhhHhccCCCCCchhhccccchHHHHHhhCCCCCCCCCCHHHHHHHHHhhcCCCChhhhhhhhhcc
Confidence 2234456788999999987665 6899999999999999999999976443322222222211100
Q ss_pred -----------------hhcCChhHHHHHHhhcCCChhhHHhHHHHHH
Q 042825 591 -----------------MHKNHDTFQMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 591 -----------------~~~~~~~l~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
....++.+.+++.+||+.||.+|+++.++++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~sa~e~L~ 282 (292)
T d1unla_ 235 DYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ 282 (292)
T ss_dssp TCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred cccccccccccchhhhccccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 0011356889999999999999999998764
|
| >d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38-gamma species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.91 E-value=4.7e-24 Score=221.19 Aligned_cols=198 Identities=20% Similarity=0.277 Sum_probs=141.1
Q ss_pred hcCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhcCChhHH----------------
Q 042825 416 ATNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTKGTLGRH---------------- 478 (631)
Q Consensus 416 ~t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~gsL~~~---------------- 478 (631)
..+.|+..+.||+|+||+||+|+.. +|+.||||+++.........+++.+|+++|++-+....
T Consensus 16 ~~~~Y~~i~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~hpniv~l~~~~~~~~~~~~~ 95 (346)
T d1cm8a_ 16 VRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDF 95 (346)
T ss_dssp CBSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTC
T ss_pred cCCcEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEchhhcChHHHHHHHHHHHHHHhcCCCCeeEEEEEeccCcccccc
Confidence 4578999999999999999999965 59999999998766666677889999999987111000
Q ss_pred -------------hHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCC
Q 042825 479 -------------LFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPE 521 (631)
Q Consensus 479 -------------L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~ 521 (631)
+..... ...+++.....++.+++.| +.+|++|||+|+....
T Consensus 96 ~~~~lv~e~~~~~l~~~~~--~~~l~~~~~~~~~~qi~~aL~~LH~~~IiHrDiKp~NIL~~~~~~~kl~Dfg~a~~~~~ 173 (346)
T d1cm8a_ 96 TDFYLVMPFMGTDLGKLMK--HEKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQADS 173 (346)
T ss_dssp CCCEEEEECCSEEHHHHHH--HCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCS
T ss_pred ceEEEEEecccccHHHHHH--hccccHHHHHHHHHHHHHHHHHHHhCCCcccccCcchhhcccccccccccccceeccCC
Confidence 000111 1358888888899888877 5678999999987642
Q ss_pred CCccccccccccCcccccccccccC-CCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHH--------------
Q 042825 522 NGKHSILTKVAGTFGYLAPEYIVTG-RITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLAT-------------- 586 (631)
Q Consensus 522 ~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~-------------- 586 (631)
..+...||+.|+|||.+.+. .++.++||||+||++|||++|+.||.+...... ...+..
T Consensus 174 -----~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~ell~g~~pf~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 247 (346)
T d1cm8a_ 174 -----EMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQ-LKEIMKVTGTPPAEFVQRLQ 247 (346)
T ss_dssp -----SCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HHHHHHHHCCCCHHHHHTCS
T ss_pred -----ccccccccccccCHHHHcCCCCCCccchhhcchHHHHHHHHCcCCCCCCChHHH-HHHHHhccCCCcHHHHhhhc
Confidence 23456899999999998764 578999999999999999999999986532111 000100
Q ss_pred ------HhH------------hhhcCChhHHHHHHhhcCCChhhHHhHHHHHH
Q 042825 587 ------WFQ------------KMHKNHDTFQMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 587 ------~~~------------~~~~~~~~l~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
+.. .....++++.++|.+||..||.+|+++.++++
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~eiL~ 300 (346)
T d1cm8a_ 248 SDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALA 300 (346)
T ss_dssp CHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred chhhhhhhccCCcccccchHHhccCCCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence 000 00112467889999999999999999999876
|
| >d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Ribosomal protein S6 kinase alpha 5, Msk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.90 E-value=1.1e-24 Score=223.15 Aligned_cols=198 Identities=19% Similarity=0.259 Sum_probs=138.7
Q ss_pred CCcccceeecCCCceEEEEEEec----CCcEEEEEEEecCCC--CHHHHHHHHHHHHHHhc-------------------
Q 042825 418 NNFSEENRLGRGGVGTVYKGELK----DGTEVGVKRMELGSV--TEQGIAQFESEITVLTK------------------- 472 (631)
Q Consensus 418 ~~f~~~~~iG~G~fg~Vyk~~~~----~g~~vAvK~l~~~~~--~~~~~~~~~~Ei~~l~~------------------- 472 (631)
++|+..+.||+|+||+||+|+.. +|+.||||+++.... .....+.+.+|++++.+
T Consensus 24 ~~y~~~~~IG~G~fg~Vy~~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~~E~~il~~l~h~pnIv~~~~~~~~~~~ 103 (322)
T d1vzoa_ 24 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETK 103 (322)
T ss_dssp GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTE
T ss_pred hceEEEEEEecCCCeEEEEEEECccCCCCcEEEEEEEehHHhccchHHHHHHHHHHHHHHhccCCCeEEEeeeeeccCCc
Confidence 57999999999999999999852 488999999864321 11223567788888876
Q ss_pred ----------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccc
Q 042825 473 ----------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRL 518 (631)
Q Consensus 473 ----------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~ 518 (631)
|+|.+++... ..+.......++.+++.| +.+||+|||+|+.
T Consensus 104 ~~~v~e~~~~~~L~~~i~~~-----~~~~e~~~~~~~~Qi~~al~~lH~~~ivHrDiKp~Nill~~~~~vkL~DFG~a~~ 178 (322)
T d1vzoa_ 104 LHLILDYINGGELFTHLSQR-----ERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKE 178 (322)
T ss_dssp EEEEECCCCSCBHHHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEESCSSEEEE
T ss_pred eeeeeecccccHHHHHHHhc-----ccccHHHHHHHHHHHHHHHHHhhcCCEEeccCCccceeecCCCCEEEeeccchhh
Confidence 6676666431 123444445555555554 5689999999987
Q ss_pred cCCCCccccccccccCcccccccccccC--CCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHhHhh----h
Q 042825 519 VPENGKHSILTKVAGTFGYLAPEYIVTG--RITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWFQKM----H 592 (631)
Q Consensus 519 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~--~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~~~~----~ 592 (631)
+... .........|++.|+|||.+.+. .++.++||||+||+||||+||+.||.+.................. .
T Consensus 179 ~~~~-~~~~~~~~~g~~~~~~pe~~~~~~~~~~~ksDIWSlG~iLyelltG~~PF~~~~~~~~~~~i~~~~~~~~~~~~~ 257 (322)
T d1vzoa_ 179 FVAD-ETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQ 257 (322)
T ss_dssp CCGG-GGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHHHCCCCCCT
T ss_pred hccc-ccccccccccccccchhHHhhcCCcCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcccCCCCCcc
Confidence 6422 22234456899999999998754 478899999999999999999999986644332222222222211 1
Q ss_pred cCChhHHHHHHhhcCCChhhHHh-----HHHHHH
Q 042825 593 KNHDTFQMAIDKTIQLDEENLAN-----VSTVAE 621 (631)
Q Consensus 593 ~~~~~l~~~id~~L~~d~~~r~~-----~~~vl~ 621 (631)
..++++.+++.+||..||.+|++ +.++++
T Consensus 258 ~~s~~~~~li~~~l~~dP~~R~s~~~~t~~eil~ 291 (322)
T d1vzoa_ 258 EMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKE 291 (322)
T ss_dssp TSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHT
T ss_pred cCCHHHHHHHHHHcccCHHHcCCCCcccHHHHHc
Confidence 23578999999999999999984 666653
|
| >d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.90 E-value=4.4e-24 Score=221.62 Aligned_cols=195 Identities=20% Similarity=0.260 Sum_probs=144.5
Q ss_pred hcCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc----------------------
Q 042825 416 ATNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK---------------------- 472 (631)
Q Consensus 416 ~t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~---------------------- 472 (631)
..++|+..+.||+|+||+||+|+.. +|+.||||++..........+++.+|++++++
T Consensus 16 ~~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~h~~iv~~~~~~~~~~~~~~~ 95 (348)
T d2gfsa1 16 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF 95 (348)
T ss_dssp EETTEEEEEECGGGTTSSEEEEEETTTTEEEEEEECSCTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSTTTC
T ss_pred CCCCeEEEEEEecCCCeEEEEEEECCCCCEEEEEEECchhcChHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeccccccC
Confidence 4578999999999999999999964 69999999998766666677789999999876
Q ss_pred -----------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeecccc
Q 042825 473 -----------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVR 517 (631)
Q Consensus 473 -----------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~ 517 (631)
|+|.+++. ...++......++.+++.| +.+|++|||++.
T Consensus 96 ~~~~i~~~~~gg~L~~~~~------~~~l~e~~~~~i~~qil~aL~~LH~~giiHrDiKp~NILi~~~~~~kl~dfg~a~ 169 (348)
T d2gfsa1 96 NDVYLVTHLMGADLNNIVK------CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR 169 (348)
T ss_dssp CCCEEEEECCSEEHHHHHT------TCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCC----
T ss_pred ceEEEEEeecCCchhhhcc------cccccHHHHHHHHHHHHHHHHHHHhCCCcccccCCccccccccccccccccchhc
Confidence 34444332 2358888888888888876 567899999997
Q ss_pred ccCCCCccccccccccCcccccccccccCC-CCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHHHh--------
Q 042825 518 LVPENGKHSILTKVAGTFGYLAPEYIVTGR-ITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLATWF-------- 588 (631)
Q Consensus 518 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~~~-------- 588 (631)
... .......||..|+|||...+.. ++.++||||+||++|||++|+.||.+..........+....
T Consensus 170 ~~~-----~~~~~~~g~~~y~apE~~~~~~~~~~~~DiwSlGv~l~~ll~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~ 244 (348)
T d2gfsa1 170 HTD-----DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLK 244 (348)
T ss_dssp CCT-----GGGSSSCHHHHTSCHHHHTTCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHT
T ss_pred ccC-----cccccccccccccCchhhcCCccCCcccchhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChHHhh
Confidence 652 2234567999999999877654 68999999999999999999999986532211111111000
Q ss_pred -----------------------HhhhcCChhHHHHHHhhcCCChhhHHhHHHHHH
Q 042825 589 -----------------------QKMHKNHDTFQMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 589 -----------------------~~~~~~~~~l~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
......++++.++|.+||..||.+|+++.++++
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~elL~ 300 (348)
T d2gfsa1 245 KISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA 300 (348)
T ss_dssp TCCCHHHHHHHTTSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred hccchhhhhhhhhcccCCCcchhhhcCCCCHHHHHHHHHHCcCChhhCcCHHHHhc
Confidence 001123567899999999999999999999876
|
| >d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Glycogen synthase kinase-3 beta (Gsk3b) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.90 E-value=7e-24 Score=220.16 Aligned_cols=192 Identities=17% Similarity=0.242 Sum_probs=139.0
Q ss_pred CcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhc-------------------------
Q 042825 419 NFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTK------------------------- 472 (631)
Q Consensus 419 ~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~------------------------- 472 (631)
+|...++||+|+||+||+|+.. +|+.||||++..... .+.+|+++|.+
T Consensus 21 ~Y~~~k~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~------~~~~Ei~il~~l~h~niv~~~~~~~~~~~~~~~~~~ 94 (350)
T d1q5ka_ 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR------FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYL 94 (350)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSS------SCCHHHHHHHHCCCTTBCCEEEEEEEC--CCSCCEE
T ss_pred CcEeeeEEeeCcCeEEEEEEECCCCCEEEEEEECccch------HHHHHHHHHHhcCCCCCCcEEEEEEecCccCCceEE
Confidence 5888899999999999999976 599999999976532 23467887765
Q ss_pred --------CChhHHhHhhhhcCCCCCCHHHHHHHHHHhhcC-------------------------CCcEEEeecccccc
Q 042825 473 --------GTLGRHLFNWEEEGLEPLEWNTRLNIALDVARG-------------------------DDMRVADFGLVRLV 519 (631)
Q Consensus 473 --------gsL~~~L~~~~~~~~~~L~~~~~~~I~~~ia~g-------------------------~~~kl~DFGla~~~ 519 (631)
+++...+.. .......+++.+...++.+++.| ..+||+|||+++..
T Consensus 95 ~lv~Ey~~~~~~~~l~~-~~~~~~~l~~~~~~~i~~qil~aL~yLH~~~IiHrDiKp~NILl~~~~~~~kl~DFG~a~~~ 173 (350)
T d1q5ka_ 95 NLVLDYVPETVYRVARH-YSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 173 (350)
T ss_dssp EEEEECCSEEHHHHHHH-HHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTTTCCEEECCCTTCEEC
T ss_pred EEEEeccCCccHHHHHh-hhhccCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCcceEEEecCCCceeEecccchhhc
Confidence 112222221 11234568998888899888877 35789999999876
Q ss_pred CCCCccccccccccCccccccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHH--------HhHh
Q 042825 520 PENGKHSILTKVAGTFGYLAPEYIVT-GRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLAT--------WFQK 590 (631)
Q Consensus 520 ~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~--------~~~~ 590 (631)
.... ......||..|+|||.+.+ ..|+.++||||+||++|||++|+.||....... ....+.+ +...
T Consensus 174 ~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~DIwSlG~il~el~~g~~pf~~~~~~~-~l~~i~~~~g~~~~~~~~~ 249 (350)
T d1q5ka_ 174 VRGE---PNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVD-QLVEIIKVLGTPTREQIRE 249 (350)
T ss_dssp CTTS---CCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHH-HHHHHHHHHCCCCHHHHHH
T ss_pred cCCc---ccccccccccccChHHhhcccCCCcceeecccceEEEehhhCCCCCCCCCHHH-HHHHHHHHhCCChHHhhhh
Confidence 4222 2345689999999998765 468999999999999999999999997643221 1111111 0000
Q ss_pred h----------------------hcCChhHHHHHHhhcCCChhhHHhHHHHHH
Q 042825 591 M----------------------HKNHDTFQMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 591 ~----------------------~~~~~~l~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
. ...++++.+++.+||..||.+|+++.++++
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~ 302 (350)
T d1q5ka_ 250 MNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA 302 (350)
T ss_dssp HCC---CCCCCCCCCCCGGGTSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred hccchhhccccccccCchhhhcccCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 0 012457899999999999999999999875
|
| >d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase CK2, alpha subunit species: Rattus norvegicus [TaxId: 10116]
Probab=99.89 E-value=1.7e-23 Score=215.38 Aligned_cols=196 Identities=17% Similarity=0.262 Sum_probs=141.3
Q ss_pred CCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhcCChhHHh-----------------
Q 042825 418 NNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTKGTLGRHL----------------- 479 (631)
Q Consensus 418 ~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~gsL~~~L----------------- 479 (631)
++|+..++||+|+||+||+|+.. +|+.||||+++.. ..+++.+|+++|.+-.-+..+
T Consensus 35 d~y~i~~~LG~G~fg~V~~a~~~~~~~~vAiK~i~~~-----~~~~~~~Ei~il~~l~~hpnIv~~~~~~~~~~~~~~~~ 109 (328)
T d3bqca1 35 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV-----KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPAL 109 (328)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSS-----CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCSEEE
T ss_pred cCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEECHH-----HHHHHHHHHHHHHhccCCCCCcEEEEEEEecCCCceeE
Confidence 57999999999999999999974 6999999999753 246788999988761100000
Q ss_pred -Hhhh-----hcCCCCCCHHHHHHHHHHhhcC-------------------------CCcEEEeeccccccCCCCccccc
Q 042825 480 -FNWE-----EEGLEPLEWNTRLNIALDVARG-------------------------DDMRVADFGLVRLVPENGKHSIL 528 (631)
Q Consensus 480 -~~~~-----~~~~~~L~~~~~~~I~~~ia~g-------------------------~~~kl~DFGla~~~~~~~~~~~~ 528 (631)
.++. ......++......++.+++.| ..+||+|||+|+...... ..
T Consensus 110 v~e~~~~~~L~~~~~~l~e~~i~~i~~qil~aL~~LH~~gIvHrDiKp~NILi~~~~~~vkl~DFG~a~~~~~~~---~~ 186 (328)
T d3bqca1 110 VFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQ---EY 186 (328)
T ss_dssp EEECCCSCBGGGTTTSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTTEEEECCGGGCEECCTTC---CC
T ss_pred EEeecCCCcHHHHhcCCCHHHHHHHHHHHHHHHHHHhhcccccccccccceEEcCCCCeeeecccccceeccCCC---cc
Confidence 0000 1113467888888888888876 237899999998764322 23
Q ss_pred cccccCcccccccccccCC-CCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHH---------HhHh--------
Q 042825 529 TKVAGTFGYLAPEYIVTGR-ITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLAT---------WFQK-------- 590 (631)
Q Consensus 529 ~~~~gt~~Y~aPE~~~~~~-~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~---------~~~~-------- 590 (631)
...+||+.|+|||.+.+.. ++.++||||+||++|||++|+.||............+.. |...
T Consensus 187 ~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~~l~e~~~g~~pf~~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~ 266 (328)
T d3bqca1 187 NVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPR 266 (328)
T ss_dssp CSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCCCGG
T ss_pred cccccCccccCcccccCCCCCCcccchhhhhhhhHHhccCCCCCCCCchhHHHHHHHHHHHCCchhhhhhhhcccccCcc
Confidence 5567999999999987654 799999999999999999999999765433222111111 1100
Q ss_pred ---------------------hhcCChhHHHHHHhhcCCChhhHHhHHHHHH
Q 042825 591 ---------------------MHKNHDTFQMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 591 ---------------------~~~~~~~l~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
....++++.++|.+||..||.+|+++.++++
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~e~L~ 318 (328)
T d3bqca1 267 FNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAME 318 (328)
T ss_dssp GGGTCCCCCCCCGGGGCCTTTGGGCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred cchhcccccccchhhcccccccccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 0112356899999999999999999999875
|
| >d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-jun N-terminal kinase (jnk3s) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.89 E-value=1.4e-23 Score=218.36 Aligned_cols=202 Identities=14% Similarity=0.190 Sum_probs=136.2
Q ss_pred cCCcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhcCChhHHh----------------
Q 042825 417 TNNFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTKGTLGRHL---------------- 479 (631)
Q Consensus 417 t~~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~gsL~~~L---------------- 479 (631)
.++|+..++||+|+||+||+|+.. +|+.||||++..........+++.+|+.++++-.....+
T Consensus 16 ~~~Y~i~~~LG~G~fg~V~~~~d~~t~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~f~~~~~~~~~~ 95 (355)
T d2b1pa1 16 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQ 95 (355)
T ss_dssp ETTEEEEEECSCC--CEEEEEEETTTTEEEEEEEEESTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCC
T ss_pred cCCeEEEEEeecCcCeEEEEEEECCCCCEEEEEEEChhhcCHHHHHHHHHHHHHHHhcCCCCeeEEEEEEecccccccCc
Confidence 468999999999999999999976 699999999987766666777899999998771110000
Q ss_pred -----Hhhh-----hcCCCCCCHHHHHHHHHHhhcC------------------------CCcEEEeeccccccCCCCcc
Q 042825 480 -----FNWE-----EEGLEPLEWNTRLNIALDVARG------------------------DDMRVADFGLVRLVPENGKH 525 (631)
Q Consensus 480 -----~~~~-----~~~~~~L~~~~~~~I~~~ia~g------------------------~~~kl~DFGla~~~~~~~~~ 525 (631)
.++. ......+++.....++.+++.| +.+|++|||+++.... .
T Consensus 96 ~~~iv~Ey~~~~l~~~~~~~~~~~~i~~~~~qil~gl~~LH~~giiHrDlKP~Nil~~~~~~~kl~df~~~~~~~~---~ 172 (355)
T d2b1pa1 96 DVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT---S 172 (355)
T ss_dssp EEEEEEECCSEEHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCCCC----------
T ss_pred eeEEEEeccchHHHHhhhcCCCHHHHHHHHHHHHHHHHHhhhcccccccCCccccccccccceeeechhhhhcccc---c
Confidence 0000 0012357888888888888877 4578999999987642 2
Q ss_pred ccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChHHHHHHHH-------Hh----------
Q 042825 526 SILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPEYIIHLAT-------WF---------- 588 (631)
Q Consensus 526 ~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~~~~~l~~-------~~---------- 588 (631)
......+||+.|+|||++.+..++.++||||+||++|||++|+.||.+..........+.. +.
T Consensus 173 ~~~~~~~~t~~y~aPE~l~~~~~~~~~DiwSlG~~l~ell~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 252 (355)
T d2b1pa1 173 FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNY 252 (355)
T ss_dssp --------CCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHTTSCHHHHHH
T ss_pred cccccccccccccChhhhcCCCCCCCcccccccchHHHHhhCCCCCCCCCHHHHHHHHHHhccCCCHHHHHHhhhhHHHH
Confidence 2345568999999999999999999999999999999999999999754322111111100 00
Q ss_pred -Hh------------------------hhcCChhHHHHHHhhcCCChhhHHhHHHHHH
Q 042825 589 -QK------------------------MHKNHDTFQMAIDKTIQLDEENLANVSTVAE 621 (631)
Q Consensus 589 -~~------------------------~~~~~~~l~~~id~~L~~d~~~r~~~~~vl~ 621 (631)
.. ....++++.+++.+||..||++|+++.++++
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~ta~elL~ 310 (355)
T d2b1pa1 253 VENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQ 310 (355)
T ss_dssp HHTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred hhcCccccccccccccccccccccccccccCCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence 00 0001246789999999999999999999874
|
| >d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Sky1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.85 E-value=2.1e-21 Score=202.12 Aligned_cols=195 Identities=18% Similarity=0.217 Sum_probs=131.9
Q ss_pred CcccceeecCCCceEEEEEEec-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHhcCC-----h-----hHHh--------
Q 042825 419 NFSEENRLGRGGVGTVYKGELK-DGTEVGVKRMELGSVTEQGIAQFESEITVLTKGT-----L-----GRHL-------- 479 (631)
Q Consensus 419 ~f~~~~~iG~G~fg~Vyk~~~~-~g~~vAvK~l~~~~~~~~~~~~~~~Ei~~l~~gs-----L-----~~~L-------- 479 (631)
+|+..++||+|+||+||+|+.. +|+.||||+++.. ....+.+.+|+.++.+-. . +.++
T Consensus 14 rY~i~~~LG~G~fg~Vy~~~~~~~g~~vAvKvi~~~---~~~~~~~~~Ei~~l~~l~~~~~~~~~~~~~~~iv~~~~~~~ 90 (362)
T d1q8ya_ 14 RYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGD---KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFN 90 (362)
T ss_dssp TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC---HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEE
T ss_pred cEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEecc---ccchHHHHHHHHHHHHhcchhhhhhhhcCcCceEEEEEEee
Confidence 4899999999999999999965 6999999999754 233456778887765400 0 0000
Q ss_pred ---------------------HhhhhcCCCCCCHHHHHHHHHHhhcC-------------------------------CC
Q 042825 480 ---------------------FNWEEEGLEPLEWNTRLNIALDVARG-------------------------------DD 507 (631)
Q Consensus 480 ---------------------~~~~~~~~~~L~~~~~~~I~~~ia~g-------------------------------~~ 507 (631)
..........+.......++.++++| ..
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~qil~al~~lh~~~~IvHrDlKp~NIll~~~~~~~~~~~ 170 (362)
T d1q8ya_ 91 HKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQ 170 (362)
T ss_dssp EEETTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGEEEEEEETTTTEEE
T ss_pred eccccceeeeeeecccccccccccccccccCCcHHHHHHHHHHHHHHHHHHhhhcCcccccCChhHeeeeccCcccccce
Confidence 00011223456666667777776654 12
Q ss_pred cEEEeeccccccCCCCccccccccccCcccccccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCChH--HHHHHH
Q 042825 508 MRVADFGLVRLVPENGKHSILTKVAGTFGYLAPEYIVTGRITAKVDVYSFGMILMDLITGRKVVDATHSDPE--YIIHLA 585 (631)
Q Consensus 508 ~kl~DFGla~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~k~DVwS~GvvL~ElltG~~P~~~~~~~~~--~~~~l~ 585 (631)
++++|||.++.... .....+||+.|+|||++....++.++||||+||+++||++|+.||........ ....+.
T Consensus 171 ~kl~dfg~s~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~g~~pF~~~~~~~~~~~~~~~~ 245 (362)
T d1q8ya_ 171 IKIADLGNACWYDE-----HYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIA 245 (362)
T ss_dssp EEECCCTTCEETTB-----CCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHH
T ss_pred eeEeeccccccccc-----ccccccccccccChhhccccCCCccccccchHHHHHHHHHCCCCCCCCccccccchhHHHH
Confidence 67999999986532 22456799999999999999999999999999999999999999975422110 000111
Q ss_pred HHhH------------------------------------------hhh----cCChhHHHHHHhhcCCChhhHHhHHHH
Q 042825 586 TWFQ------------------------------------------KMH----KNHDTFQMAIDKTIQLDEENLANVSTV 619 (631)
Q Consensus 586 ~~~~------------------------------------------~~~----~~~~~l~~~id~~L~~d~~~r~~~~~v 619 (631)
.... ... ..++++.+++.+||..||.+|+++.++
T Consensus 246 ~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~Rpta~e~ 325 (362)
T d1q8ya_ 246 QIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGL 325 (362)
T ss_dssp HHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHH
T ss_pred HHHHHhCCCCHHHhhcccccccccccchhhhccccccCCchhhhcccccccCcccCHHHHHHHHHHCCCChhHCcCHHHH
Confidence 1000 000 012467899999999999999999998
Q ss_pred HH
Q 042825 620 AE 621 (631)
Q Consensus 620 l~ 621 (631)
++
T Consensus 326 L~ 327 (362)
T d1q8ya_ 326 VN 327 (362)
T ss_dssp HT
T ss_pred hc
Confidence 65
|
| >d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Polygalacturonase inhibiting protein PGIP domain: Polygalacturonase inhibiting protein PGIP species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Probab=99.74 E-value=6.2e-20 Score=186.91 Aligned_cols=155 Identities=21% Similarity=0.321 Sum_probs=130.8
Q ss_pred CCeEEEEeCCCCCcccCcchhcCCccC-ceeecccCcccCCCCcCcc--cccccccccccceecCCCCCCcCCCCCCcEE
Q 042825 97 GQVTNIELQDQNRKGTVPPILKKLSSM-AVMYLENNQLRGPIPSLVG--SLEFFSAYEANISGTIPDFIGTDTFPQLSYL 173 (631)
Q Consensus 97 ~~l~~l~l~~n~l~g~ip~~~~~l~~L-~~L~L~~N~l~g~lP~~~~--~L~~L~l~~n~l~g~ip~~~~~~~l~~L~~L 173 (631)
..++.+++++|.+.|.+|..++.+..+ +.+++++|+++|..|..+. .+..+++..|.+.|.+|..++ .+++|+.|
T Consensus 149 ~~L~~l~l~~n~l~~~ip~~~~~l~~l~~~l~~~~n~l~~~~~~~~~~l~~~~l~l~~~~~~~~~~~~~~--~~~~l~~l 226 (313)
T d1ogqa_ 149 PNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLNLAFVDLSRNMLEGDASVLFG--SDKNTQKI 226 (313)
T ss_dssp TTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCCCSEEECCSSEEEECCGGGCC--TTSCCSEE
T ss_pred cccceeeccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc--cccccccc
Confidence 467888888888888888888888776 7788888888888887776 445678888889999998887 88999999
Q ss_pred EccCCcccccCCCCCCCCccCcCCCCCCCEEEeecCcCcccCChhhccCCCCCCEEEccCCCCcccCCCCCCCCceEEee
Q 042825 174 DLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNNLLQGPTPRFNNSKLTVDMR 253 (631)
Q Consensus 174 ~Ls~N~l~g~iP~~~~~~~~~~~~l~~L~~L~L~~N~l~g~iP~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~~~~~~l~ 253 (631)
++++|.++|.+|. ++.+++|++|+|++|+|+|.+|.. ++.+++|++|+|++|+|+|.+|....+.....++
T Consensus 227 ~~~~~~l~~~~~~--------~~~~~~L~~L~Ls~N~l~g~iP~~-l~~L~~L~~L~Ls~N~l~g~iP~~~~L~~L~~l~ 297 (313)
T d1ogqa_ 227 HLAKNSLAFDLGK--------VGLSKNLNGLDLRNNRIYGTLPQG-LTQLKFLHSLNVSFNNLCGEIPQGGNLQRFDVSA 297 (313)
T ss_dssp ECCSSEECCBGGG--------CCCCTTCCEEECCSSCCEECCCGG-GGGCTTCCEEECCSSEEEEECCCSTTGGGSCGGG
T ss_pred ccccccccccccc--------cccccccccccCccCeecccCChH-HhCCCCCCEEECcCCcccccCCCcccCCCCCHHH
Confidence 9999999987663 347899999999999999999976 9999999999999999999999875554444566
Q ss_pred cCCCc-ccCC
Q 042825 254 TGSNC-FCLD 262 (631)
Q Consensus 254 ~~~n~-~~~~ 262 (631)
+++|+ +||.
T Consensus 298 l~~N~~l~g~ 307 (313)
T d1ogqa_ 298 YANNKCLCGS 307 (313)
T ss_dssp TCSSSEEEST
T ss_pred hCCCccccCC
Confidence 78886 7884
|
| >d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: von Willebrand factor binding domain of glycoprotein Ib alpha species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.64 E-value=5.4e-16 Score=153.60 Aligned_cols=150 Identities=25% Similarity=0.291 Sum_probs=109.4
Q ss_pred CCeEEEEeCCCCCcccCcchhcCCccCceeecccCcccCCCCcCc---ccccccccccccceecCCCCCCcCCCCCCcEE
Q 042825 97 GQVTNIELQDQNRKGTVPPILKKLSSMAVMYLENNQLRGPIPSLV---GSLEFFSAYEANISGTIPDFIGTDTFPQLSYL 173 (631)
Q Consensus 97 ~~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~L~~N~l~g~lP~~~---~~L~~L~l~~n~l~g~ip~~~~~~~l~~L~~L 173 (631)
.+++.|+|++|+++ .+|. ++.+++|++|+|++|++++ +|..+ .+|+.|++++|.+.+..+..+. .+.+|+.|
T Consensus 55 ~~L~~L~L~~N~l~-~l~~-~~~l~~L~~L~Ls~N~l~~-~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~--~l~~l~~L 129 (266)
T d1p9ag_ 55 TRLTQLNLDRAELT-KLQV-DGTLPVLGTLDLSHNQLQS-LPLLGQTLPALTVLDVSFNRLTSLPLGALR--GLGELQEL 129 (266)
T ss_dssp TTCCEEECTTSCCC-EEEC-CSCCTTCCEEECCSSCCSS-CCCCTTTCTTCCEEECCSSCCCCCCSSTTT--TCTTCCEE
T ss_pred cccccccccccccc-cccc-ccccccccccccccccccc-cccccccccccccccccccccceeeccccc--cccccccc
Confidence 36788888888887 4553 5678888888888888874 34333 3778888888887765555555 67788888
Q ss_pred EccCCcccccCCCCCCCCccCcCCCCCCCEEEeecCcCcccCChhhccCCCCCCEEEccCCCCcccCCCCCCCCceEEee
Q 042825 174 DLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNNLLQGPTPRFNNSKLTVDMR 253 (631)
Q Consensus 174 ~Ls~N~l~g~iP~~~~~~~~~~~~l~~L~~L~L~~N~l~g~iP~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~~~~~~l~ 253 (631)
++++|.++ .+|+.+ +..+++|+.|++++|+|++ +|...|..+++|++|+|++|+|+...+.+........++
T Consensus 130 ~l~~n~l~-~l~~~~------~~~l~~l~~l~l~~N~l~~-~~~~~~~~l~~L~~L~Ls~N~L~~lp~~~~~~~~L~~L~ 201 (266)
T d1p9ag_ 130 YLKGNELK-TLPPGL------LTPTPKLEKLSLANNNLTE-LPAGLLNGLENLDTLLLQENSLYTIPKGFFGSHLLPFAF 201 (266)
T ss_dssp ECTTSCCC-CCCTTT------TTTCTTCCEEECTTSCCSC-CCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCCCSEEE
T ss_pred cccccccc-eecccc------ccccccchhcccccccccc-cCccccccccccceeecccCCCcccChhHCCCCCCCEEE
Confidence 88888887 565443 4578899999999999995 554558889999999999999994444455554455667
Q ss_pred cCCCcc
Q 042825 254 TGSNCF 259 (631)
Q Consensus 254 ~~~n~~ 259 (631)
+++|.+
T Consensus 202 L~~Np~ 207 (266)
T d1p9ag_ 202 LHGNPW 207 (266)
T ss_dssp CCSCCB
T ss_pred ecCCCC
Confidence 788865
|
| >d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Slit species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=99.62 E-value=4.9e-16 Score=146.02 Aligned_cols=128 Identities=20% Similarity=0.293 Sum_probs=102.5
Q ss_pred EEEeCCCCCcccCcchhcCCccCceeecccCcccCCCCcC-c---ccccccccccccceecCCCCCCcCCCCCCcEEEcc
Q 042825 101 NIELQDQNRKGTVPPILKKLSSMAVMYLENNQLRGPIPSL-V---GSLEFFSAYEANISGTIPDFIGTDTFPQLSYLDLG 176 (631)
Q Consensus 101 ~l~l~~n~l~g~ip~~~~~l~~L~~L~L~~N~l~g~lP~~-~---~~L~~L~l~~n~l~g~ip~~~~~~~l~~L~~L~Ls 176 (631)
.++.++++|+ .||..+. +++++|+|++|+|++.++.. + .+|+.|++++|++.+..+..+. .+++|++|+|+
T Consensus 12 ~v~Cs~~~L~-~iP~~lp--~~l~~L~Ls~N~i~~~~~~~~f~~l~~L~~L~L~~N~i~~~~~~~~~--~~~~L~~L~Ls 86 (192)
T d1w8aa_ 12 TVDCTGRGLK-EIPRDIP--LHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFE--GASHIQELQLG 86 (192)
T ss_dssp EEECTTSCCS-SCCSCCC--TTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTT--TCTTCCEEECC
T ss_pred EEEEeCCCcC-ccCCCCC--CCCCEEEeCCCCCcccccccccCCCceEeeeeccccccccccccccc--cccccceeeec
Confidence 4566777888 7887664 68999999999998766543 3 3889999999999988888877 78899999999
Q ss_pred CCcccccCCCCCCCCccCcCCCCCCCEEEeecCcCcccCChhhccCCCCCCEEEccCCCCcccCC
Q 042825 177 NNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNNLLQGPTP 241 (631)
Q Consensus 177 ~N~l~g~iP~~~~~~~~~~~~l~~L~~L~L~~N~l~g~iP~~~~~~l~~L~~L~ls~N~l~g~~p 241 (631)
+|+|+ .+|+.. |.++++|++|+|++|+|+ .||+..|..+++|++|+|++|.+....+
T Consensus 87 ~N~l~-~l~~~~------F~~l~~L~~L~L~~N~l~-~i~~~~f~~l~~L~~l~L~~N~~~~~~~ 143 (192)
T d1w8aa_ 87 ENKIK-EISNKM------FLGLHQLKTLNLYDNQIS-CVMPGSFEHLNSLTSLNLASNPFNCNCH 143 (192)
T ss_dssp SCCCC-EECSSS------STTCTTCCEEECCSSCCC-EECTTSSTTCTTCCEEECTTCCBCCSGG
T ss_pred ccccc-ccCHHH------HhCCCcccccccCCcccc-ccCHHHhcCCcccccccccccccccccc
Confidence 99999 555432 568999999999999999 4555668899999999999998876543
|
| >d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: von Willebrand factor binding domain of glycoprotein Ib alpha species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.61 E-value=2.7e-15 Score=148.43 Aligned_cols=156 Identities=21% Similarity=0.273 Sum_probs=128.4
Q ss_pred CCeEEEEeCCCCCcccCcchhcCCccCceeecccCcccCCCCc--CcccccccccccccceecCCCCCCcCCCCCCcEEE
Q 042825 97 GQVTNIELQDQNRKGTVPPILKKLSSMAVMYLENNQLRGPIPS--LVGSLEFFSAYEANISGTIPDFIGTDTFPQLSYLD 174 (631)
Q Consensus 97 ~~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~L~~N~l~g~lP~--~~~~L~~L~l~~n~l~g~ip~~~~~~~l~~L~~L~ 174 (631)
..++.|+|++|.+++..+..|.++++|++|+|++|+|+ .+|. .+.+|+.|++++|++++ +|..+. .+++|+.|+
T Consensus 31 ~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~L~~N~l~-~l~~~~~l~~L~~L~Ls~N~l~~-~~~~~~--~l~~L~~L~ 106 (266)
T d1p9ag_ 31 KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELT-KLQVDGTLPVLGTLDLSHNQLQS-LPLLGQ--TLPALTVLD 106 (266)
T ss_dssp TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCC-EEECCSCCTTCCEEECCSSCCSS-CCCCTT--TCTTCCEEE
T ss_pred cCCCEEECcCCcCCCcCHHHhhcccccccccccccccc-ccccccccccccccccccccccc-cccccc--ccccccccc
Confidence 36899999999999755678999999999999999998 5554 34489999999999985 566666 789999999
Q ss_pred ccCCcccccCCCCCCCCccCcCCCCCCCEEEeecCcCcccCChhhccCCCCCCEEEccCCCCcccCCCCCC-CCceEEee
Q 042825 175 LGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNNLLQGPTPRFNN-SKLTVDMR 253 (631)
Q Consensus 175 Ls~N~l~g~iP~~~~~~~~~~~~l~~L~~L~L~~N~l~g~iP~~~~~~l~~L~~L~ls~N~l~g~~p~~~~-~~~~~~l~ 253 (631)
+++|.+. .++... +..+.+|++|++++|.++ .+|...+..+++|+.|++++|+|++.++.... ......|+
T Consensus 107 l~~~~~~-~~~~~~------~~~l~~l~~L~l~~n~l~-~l~~~~~~~l~~l~~l~l~~N~l~~~~~~~~~~l~~L~~L~ 178 (266)
T d1p9ag_ 107 VSFNRLT-SLPLGA------LRGLGELQELYLKGNELK-TLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLL 178 (266)
T ss_dssp CCSSCCC-CCCSST------TTTCTTCCEEECTTSCCC-CCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEE
T ss_pred ccccccc-eeeccc------cccccccccccccccccc-eeccccccccccchhcccccccccccCccccccccccceee
Confidence 9999998 454332 458899999999999999 66667788999999999999999998887544 44556678
Q ss_pred cCCCcccCCCCC
Q 042825 254 TGSNCFCLDDPG 265 (631)
Q Consensus 254 ~~~n~~~~~~~~ 265 (631)
+++|.+. .+|.
T Consensus 179 Ls~N~L~-~lp~ 189 (266)
T d1p9ag_ 179 LQENSLY-TIPK 189 (266)
T ss_dssp CCSSCCC-CCCT
T ss_pred cccCCCc-ccCh
Confidence 8999998 4664
|
| >d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Reticulon 4 receptor (Nogo-66 receptor, Ngr) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.60 E-value=4e-15 Score=148.66 Aligned_cols=154 Identities=19% Similarity=0.288 Sum_probs=113.3
Q ss_pred CeEEEEeC-CCCCcccCcchhcCCccCceeecccCcccCCCCcCcc---cccccccccccceecCCCCCCcCCCCCCcEE
Q 042825 98 QVTNIELQ-DQNRKGTVPPILKKLSSMAVMYLENNQLRGPIPSLVG---SLEFFSAYEANISGTIPDFIGTDTFPQLSYL 173 (631)
Q Consensus 98 ~l~~l~l~-~n~l~g~ip~~~~~l~~L~~L~L~~N~l~g~lP~~~~---~L~~L~l~~n~l~g~ip~~~~~~~l~~L~~L 173 (631)
.+..++.. .+.++...|..+.++++|++|++++|.+.+..+..+. +|+.+++++|++++..+..+. .+++|+.|
T Consensus 81 ~~~~l~~~~~~~~~~l~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~l~l~~N~l~~i~~~~f~--~~~~L~~L 158 (284)
T d1ozna_ 81 LLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFR--DLGNLTHL 158 (284)
T ss_dssp TCCEEECCSCTTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTT--TCTTCCEE
T ss_pred cccccccccccccccccchhhcccccCCEEecCCcccccccccccchhcccchhhhccccccccChhHhc--cccchhhc
Confidence 45566554 4455544466788899999999999988754444443 788888999999865556666 67889999
Q ss_pred EccCCcccccCCCCCCCCccCcCCCCCCCEEEeecCcCcccCChhhccCCCCCCEEEccCCCCcccCCCCC-CCCceEEe
Q 042825 174 DLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNNLLQGPTPRFN-NSKLTVDM 252 (631)
Q Consensus 174 ~Ls~N~l~g~iP~~~~~~~~~~~~l~~L~~L~L~~N~l~g~iP~~~~~~l~~L~~L~ls~N~l~g~~p~~~-~~~~~~~l 252 (631)
+|++|+|+ .+|+.. +.++++|+.|++++|++++..|.. |..+++|++|++++|.+++.+|... .......+
T Consensus 159 ~l~~N~l~-~l~~~~------f~~l~~L~~l~l~~N~l~~i~~~~-f~~l~~L~~L~l~~N~i~~~~~~~~~~~~~L~~L 230 (284)
T d1ozna_ 159 FLHGNRIS-SVPERA------FRGLHSLDRLLLHQNRVAHVHPHA-FRDLGRLMTLYLFANNLSALPTEALAPLRALQYL 230 (284)
T ss_dssp ECCSSCCC-EECTTT------TTTCTTCCEEECCSSCCCEECTTT-TTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEE
T ss_pred ccccCccc-ccchhh------hccccccchhhhhhccccccChhH-hhhhhhcccccccccccccccccccccccccCEE
Confidence 99999998 444332 458889999999999998766654 8888999999999999988777533 33445566
Q ss_pred ecCCCcccC
Q 042825 253 RTGSNCFCL 261 (631)
Q Consensus 253 ~~~~n~~~~ 261 (631)
++++|.+..
T Consensus 231 ~l~~N~l~C 239 (284)
T d1ozna_ 231 RLNDNPWVC 239 (284)
T ss_dssp ECCSSCEEC
T ss_pred EecCCCCCC
Confidence 778887754
|
| >d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Slit species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=99.59 E-value=5.8e-16 Score=145.55 Aligned_cols=161 Identities=19% Similarity=0.226 Sum_probs=125.2
Q ss_pred CCccceeeCCC----------CCeEEEEeCCCCCcccCc-chhcCCccCceeecccCcccCCCCcCcc---ccccccccc
Q 042825 86 CQWSHVICSDD----------GQVTNIELQDQNRKGTVP-PILKKLSSMAVMYLENNQLRGPIPSLVG---SLEFFSAYE 151 (631)
Q Consensus 86 C~w~gv~C~~~----------~~l~~l~l~~n~l~g~ip-~~~~~l~~L~~L~L~~N~l~g~lP~~~~---~L~~L~l~~ 151 (631)
|.|..|.|++. ..++.|+|++|.+++.++ ..|.++++|+.|+|++|++.+..+..+. +|+.|+|++
T Consensus 8 C~~~~v~Cs~~~L~~iP~~lp~~l~~L~Ls~N~i~~~~~~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~~~~L~~L~Ls~ 87 (192)
T d1w8aa_ 8 CEGTTVDCTGRGLKEIPRDIPLHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp EETTEEECTTSCCSSCCSCCCTTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred EcCCEEEEeCCCcCccCCCCCCCCCEEEeCCCCCcccccccccCCCceEeeeeccccccccccccccccccccceeeecc
Confidence 56888999632 378999999999997664 4679999999999999999977776665 899999999
Q ss_pred ccceecCCCCCCcCCCCCCcEEEccCCcccccCCCCCCCCccCcCCCCCCCEEEeecCcCcccCChhhccCCCCCCEEEc
Q 042825 152 ANISGTIPDFIGTDTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNL 231 (631)
Q Consensus 152 n~l~g~ip~~~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~~~~~~~~l~~L~~L~L~~N~l~g~iP~~~~~~l~~L~~L~l 231 (631)
|++++..|..|. .+++|++|+|++|+|+ .+|+.. |.++++|++|+|++|.+....+...+. ..++.+.+
T Consensus 88 N~l~~l~~~~F~--~l~~L~~L~L~~N~l~-~i~~~~------f~~l~~L~~l~L~~N~~~~~~~~~~~~--~~l~~~~l 156 (192)
T d1w8aa_ 88 NKIKEISNKMFL--GLHQLKTLNLYDNQIS-CVMPGS------FEHLNSLTSLNLASNPFNCNCHLAWFA--EWLRKKSL 156 (192)
T ss_dssp CCCCEECSSSST--TCTTCCEEECCSSCCC-EECTTS------STTCTTCCEEECTTCCBCCSGGGHHHH--HHHHHHCC
T ss_pred ccccccCHHHHh--CCCcccccccCCcccc-ccCHHH------hcCCcccccccccccccccccchHHHh--hhhhhhcc
Confidence 999987777787 8999999999999999 565442 568999999999999998654433222 23566778
Q ss_pred cCCCCcccCCCCCCCCceEEeecCCCcc
Q 042825 232 TNNLLQGPTPRFNNSKLTVDMRTGSNCF 259 (631)
Q Consensus 232 s~N~l~g~~p~~~~~~~~~~l~~~~n~~ 259 (631)
..|.++...|........ ++++.|.|
T Consensus 157 ~~~~~~c~~p~~l~~~~l--~~L~~n~l 182 (192)
T d1w8aa_ 157 NGGAARCGAPSKVRDVQI--KDLPHSEF 182 (192)
T ss_dssp SGGGCBBCSSTTTTTSBG--GGSCTTTC
T ss_pred cCCCeEeCCChhhcCCEe--eecCHhhC
Confidence 888888777764433222 24466665
|
| >d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Reticulon 4 receptor (Nogo-66 receptor, Ngr) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.52 E-value=5.5e-14 Score=140.22 Aligned_cols=134 Identities=22% Similarity=0.256 Sum_probs=74.8
Q ss_pred CeEEEEeCCCCCcccCcchhcCCccCceeecccCcccCCCCcCcc---cccccccc-cccceecCCCCCCcCCCCCCcEE
Q 042825 98 QVTNIELQDQNRKGTVPPILKKLSSMAVMYLENNQLRGPIPSLVG---SLEFFSAY-EANISGTIPDFIGTDTFPQLSYL 173 (631)
Q Consensus 98 ~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~L~~N~l~g~lP~~~~---~L~~L~l~-~n~l~g~ip~~~~~~~l~~L~~L 173 (631)
.++.|+|++|+++..-+..|.++++|++|++++|++.+..+..+. .+..+... .|.++...|..+. .+++|++|
T Consensus 33 ~~~~L~Ls~N~i~~i~~~~f~~l~~L~~L~ls~n~l~~i~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~--~l~~L~~L 110 (284)
T d1ozna_ 33 ASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFH--GLGRLHTL 110 (284)
T ss_dssp TCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTT--TCTTCCEE
T ss_pred CCCEEECcCCcCCCCCHHHhhccccccccccccccccccccccccccccccccccccccccccccchhhc--ccccCCEE
Confidence 578999999999954445799999999999999999854443332 33333332 3344433344444 55666666
Q ss_pred EccCCcccccCCCCCCCCccCcCCCCCCCEEEeecCcCcccCChhhccCCCCCCEEEccCCCCcccCC
Q 042825 174 DLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNNLLQGPTP 241 (631)
Q Consensus 174 ~Ls~N~l~g~iP~~~~~~~~~~~~l~~L~~L~L~~N~l~g~iP~~~~~~l~~L~~L~ls~N~l~g~~p 241 (631)
+|++|.+.+..+..+ ..+.+|+.+++++|+|+ .+|...|..+++|+.|++++|+|++..|
T Consensus 111 ~l~~n~~~~~~~~~~-------~~~~~L~~l~l~~N~l~-~i~~~~f~~~~~L~~L~l~~N~l~~l~~ 170 (284)
T d1ozna_ 111 HLDRCGLQELGPGLF-------RGLAALQYLYLQDNALQ-ALPDDTFRDLGNLTHLFLHGNRISSVPE 170 (284)
T ss_dssp ECTTSCCCCCCTTTT-------TTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCCCEECT
T ss_pred ecCCccccccccccc-------chhcccchhhhcccccc-ccChhHhccccchhhcccccCcccccch
Confidence 666666652222221 23444444444444444 2332334444444444444444444333
|
| >d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Decorin species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.47 E-value=2e-13 Score=137.43 Aligned_cols=91 Identities=21% Similarity=0.320 Sum_probs=66.0
Q ss_pred CCccceeeCCC----------CCeEEEEeCCCCCcccCcchhcCCccCceeecccCcccCCCCcCcc---cccccccccc
Q 042825 86 CQWSHVICSDD----------GQVTNIELQDQNRKGTVPPILKKLSSMAVMYLENNQLRGPIPSLVG---SLEFFSAYEA 152 (631)
Q Consensus 86 C~w~gv~C~~~----------~~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~L~~N~l~g~lP~~~~---~L~~L~l~~n 152 (631)
|.|.+|.|++. ..++.|+|++|+++..-+..|.++++|++|++++|.+....|..+. +|+.|++++|
T Consensus 10 c~~~~~~C~~~~L~~lP~~l~~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~l~~n~~~~i~~~~f~~l~~L~~L~l~~n 89 (305)
T d1xkua_ 10 CHLRVVQCSDLGLEKVPKDLPPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKN 89 (305)
T ss_dssp EETTEEECTTSCCCSCCCSCCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSS
T ss_pred ecCCEEEecCCCCCccCCCCCCCCCEEECcCCcCCCcChhHhhccccccccccccccccccchhhhhCCCccCEecccCC
Confidence 57999999642 4688999999999843344789999999999999999966676665 7788889888
Q ss_pred cceecCCCCCCcCCCCCCcEEEccCCccc
Q 042825 153 NISGTIPDFIGTDTFPQLSYLDLGNNNLQ 181 (631)
Q Consensus 153 ~l~g~ip~~~~~~~l~~L~~L~Ls~N~l~ 181 (631)
+++ .+|..+. ..|+.|++++|.+.
T Consensus 90 ~l~-~l~~~~~----~~l~~L~~~~n~l~ 113 (305)
T d1xkua_ 90 QLK-ELPEKMP----KTLQELRVHENEIT 113 (305)
T ss_dssp CCS-BCCSSCC----TTCCEEECCSSCCC
T ss_pred ccC-cCccchh----hhhhhhhccccchh
Confidence 887 4554432 34444444444444
|
| >d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Decorin species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.47 E-value=3.8e-13 Score=135.26 Aligned_cols=243 Identities=16% Similarity=0.135 Sum_probs=153.6
Q ss_pred cCCCCCCceecccceeehhhhc-c--c-cchhhhhhhhhhhccccccccccCCCCCCCChhhHHHHHHHHHhCCCCCC--
Q 042825 4 IPWHPSNFQLFGFPRLTFRDCM-T--A-TSELEREKTERVQGDRRKKRRKIPSASSNQSRPDAAVMQDLKASFVIPKR-- 77 (631)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~-~--~-~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~k~~~~~~~~-- 77 (631)
+-.+|.+|. -+++.|.+.++. + + .....+++|+.|++..|.+....|.........+...|...+.. ..+..
T Consensus 22 L~~lP~~l~-~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~l~~n~~~~i~~~~f~~l~~L~~L~l~~n~l~-~l~~~~~ 99 (305)
T d1xkua_ 22 LEKVPKDLP-PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLK-ELPEKMP 99 (305)
T ss_dssp CCSCCCSCC-TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCS-BCCSSCC
T ss_pred CCccCCCCC-CCCCEEECcCCcCCCcChhHhhccccccccccccccccccchhhhhCCCccCEecccCCccC-cCccchh
Confidence 344566652 356667776663 2 1 12346688888888888888655555544322111000000000 00000
Q ss_pred --CCCCCCCCCCcccee---eCCCCCeEEEEeCCCCCc--ccCcchhcCCccCceeecccCcccCCCCcCc-cccccccc
Q 042825 78 --LKWSDPDPCQWSHVI---CSDDGQVTNIELQDQNRK--GTVPPILKKLSSMAVMYLENNQLRGPIPSLV-GSLEFFSA 149 (631)
Q Consensus 78 --~~w~~~~~C~w~gv~---C~~~~~l~~l~l~~n~l~--g~ip~~~~~l~~L~~L~L~~N~l~g~lP~~~-~~L~~L~l 149 (631)
+..-......+.++. ......+..++...|... +..+..+..+++|+.+++++|.++ .+|..+ .+|+.|++
T Consensus 100 ~~l~~L~~~~n~l~~l~~~~~~~~~~~~~l~~~~n~~~~~~~~~~~~~~l~~L~~l~l~~n~l~-~l~~~~~~~L~~L~l 178 (305)
T d1xkua_ 100 KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNIT-TIPQGLPPSLTELHL 178 (305)
T ss_dssp TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCC-SCCSSCCTTCSEEEC
T ss_pred hhhhhhhccccchhhhhhhhhhccccccccccccccccccCCCccccccccccCccccccCCcc-ccCcccCCccCEEEC
Confidence 000000000111111 112234556777666443 445667888999999999999998 566544 48999999
Q ss_pred ccccceecCCCCCCcCCCCCCcEEEccCCcccccCCCCCCCCccCcCCCCCCCEEEeecCcCcccCChhhccCCCCCCEE
Q 042825 150 YEANISGTIPDFIGTDTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTL 229 (631)
Q Consensus 150 ~~n~l~g~ip~~~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~~~~~~~~l~~L~~L~L~~N~l~g~iP~~~~~~l~~L~~L 229 (631)
++|+.++..+..+. .++.++.|++++|.+++..|.. +.++++|++|+|++|+|+ .+|.. +..+++|++|
T Consensus 179 ~~n~~~~~~~~~~~--~~~~l~~L~~s~n~l~~~~~~~-------~~~l~~L~~L~L~~N~L~-~lp~~-l~~l~~L~~L 247 (305)
T d1xkua_ 179 DGNKITKVDAASLK--GLNNLAKLGLSFNSISAVDNGS-------LANTPHLRELHLNNNKLV-KVPGG-LADHKYIQVV 247 (305)
T ss_dssp TTSCCCEECTGGGT--TCTTCCEEECCSSCCCEECTTT-------GGGSTTCCEEECCSSCCS-SCCTT-TTTCSSCCEE
T ss_pred CCCcCCCCChhHhh--cccccccccccccccccccccc-------ccccccceeeeccccccc-ccccc-cccccCCCEE
Confidence 99999998888887 7899999999999999544433 568999999999999999 78875 8899999999
Q ss_pred EccCCCCcccCCCCCC-------CCceEEeecCCCccc
Q 042825 230 NLTNNLLQGPTPRFNN-------SKLTVDMRTGSNCFC 260 (631)
Q Consensus 230 ~ls~N~l~g~~p~~~~-------~~~~~~l~~~~n~~~ 260 (631)
+|++|+|+......+. ......+++++|.+.
T Consensus 248 ~Ls~N~i~~i~~~~f~~~~~~~~~~~L~~L~L~~N~~~ 285 (305)
T d1xkua_ 248 YLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQ 285 (305)
T ss_dssp ECCSSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSSSC
T ss_pred ECCCCccCccChhhccCcchhcccCCCCEEECCCCcCc
Confidence 9999999865332211 122334566788763
|
| >d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain domain: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.39 E-value=4.1e-13 Score=116.15 Aligned_cols=103 Identities=25% Similarity=0.392 Sum_probs=66.0
Q ss_pred EEEeCCCCCcccCcchhcCCccCceeecccCcccCCCCcCcccccccccccccceecCCCCCCcCCCCCCcEEEccCCcc
Q 042825 101 NIELQDQNRKGTVPPILKKLSSMAVMYLENNQLRGPIPSLVGSLEFFSAYEANISGTIPDFIGTDTFPQLSYLDLGNNNL 180 (631)
Q Consensus 101 ~l~l~~n~l~g~ip~~~~~l~~L~~L~L~~N~l~g~lP~~~~~L~~L~l~~n~l~g~ip~~~~~~~l~~L~~L~Ls~N~l 180 (631)
.|+|++|+++ .++ .+..+++|++|+|++|+|+ .+|+.++ .+++|+.|++++|++
T Consensus 2 ~L~Ls~n~l~-~l~-~l~~l~~L~~L~ls~N~l~----------------------~lp~~~~--~l~~L~~L~l~~N~i 55 (124)
T d1dcea3 2 VLHLAHKDLT-VLC-HLEQLLLVTHLDLSHNRLR----------------------ALPPALA--ALRCLEVLQASDNAL 55 (124)
T ss_dssp EEECTTSCCS-SCC-CGGGGTTCCEEECCSSCCC----------------------CCCGGGG--GCTTCCEEECCSSCC
T ss_pred EEEcCCCCCC-CCc-ccccCCCCCEEECCCCccC----------------------cchhhhh--hhhcccccccccccc
Confidence 4666666666 444 3666666666666666665 3444454 567777777777777
Q ss_pred cccCCCCCCCCccCcCCCCCCCEEEeecCcCcccCCh-hhccCCCCCCEEEccCCCCccc
Q 042825 181 QGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPV-SSFNNHPKLTTLNLTNNLLQGP 239 (631)
Q Consensus 181 ~g~iP~~~~~~~~~~~~l~~L~~L~L~~N~l~g~iP~-~~~~~l~~L~~L~ls~N~l~g~ 239 (631)
+ .+|. +.++++|++|++++|+++ .+|. ..+..+++|+.|++++|.++..
T Consensus 56 ~-~l~~--------~~~l~~L~~L~l~~N~i~-~~~~~~~l~~~~~L~~L~l~~N~i~~~ 105 (124)
T d1dcea3 56 E-NVDG--------VANLPRLQELLLCNNRLQ-QSAAIQPLVSCPRLVLLNLQGNSLCQE 105 (124)
T ss_dssp C-CCGG--------GTTCSSCCEEECCSSCCC-SSSTTGGGGGCTTCCEEECTTSGGGGS
T ss_pred c-ccCc--------cccccccCeEECCCCccC-CCCCchhhcCCCCCCEEECCCCcCCcC
Confidence 7 4542 346777777777777777 3432 2366677777777777777643
|
| >d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Probab=99.34 E-value=2.6e-12 Score=120.81 Aligned_cols=145 Identities=22% Similarity=0.283 Sum_probs=87.3
Q ss_pred CeEEEEeCCCCCcccCcchhcCCccCceeecccCcccCCCC-cCcccccccccccccceecCCCCCCcCCCCCCcEEEcc
Q 042825 98 QVTNIELQDQNRKGTVPPILKKLSSMAVMYLENNQLRGPIP-SLVGSLEFFSAYEANISGTIPDFIGTDTFPQLSYLDLG 176 (631)
Q Consensus 98 ~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~L~~N~l~g~lP-~~~~~L~~L~l~~n~l~g~ip~~~~~~~l~~L~~L~Ls 176 (631)
+++.|++++++++ .++ .+..+++|++|+|++|++++..| ..+.+|+.|++++|.+.. +|. +. .+++|+.|+++
T Consensus 41 ~l~~L~l~~~~i~-~l~-~l~~l~nL~~L~Ls~N~l~~~~~l~~l~~L~~L~l~~n~~~~-~~~-l~--~l~~L~~L~l~ 114 (199)
T d2omxa2 41 QVTTLQADRLGIK-SID-GVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIAD-ITP-LA--NLTNLTGLTLF 114 (199)
T ss_dssp TCCEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCCGGGTTCTTCCEEECCSSCCCC-CGG-GT--TCTTCSEEECC
T ss_pred CCCEEECCCCCCC-Ccc-ccccCCCcCcCccccccccCcccccCCccccccccccccccc-ccc-cc--ccccccccccc
Confidence 5666777777766 343 36667777777777777764322 122367777777776653 332 44 56777777777
Q ss_pred CCcccccCCCCCCCCccCcCCCCCCCEEEeecCcCcccCChhhccCCCCCCEEEccCCCCcccCCCCCCCCceEEeecCC
Q 042825 177 NNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNNLLQGPTPRFNNSKLTVDMRTGS 256 (631)
Q Consensus 177 ~N~l~g~iP~~~~~~~~~~~~l~~L~~L~L~~N~l~g~iP~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~~~~~~l~~~~ 256 (631)
+|.+.. ++. +.++++|+.|++++|++. .+| . +..+++|+.|++++|++++.. .+..+.....+++++
T Consensus 115 ~~~~~~-~~~--------~~~l~~L~~L~l~~n~l~-~~~-~-l~~~~~L~~L~l~~n~l~~l~-~l~~l~~L~~L~ls~ 181 (199)
T d2omxa2 115 NNQITD-IDP--------LKNLTNLNRLELSSNTIS-DIS-A-LSGLTSLQQLNFSSNQVTDLK-PLANLTTLERLDISS 181 (199)
T ss_dssp SSCCCC-CGG--------GTTCTTCSEEECCSSCCC-CCG-G-GTTCTTCSEEECCSSCCCCCG-GGTTCTTCCEEECCS
T ss_pred cccccc-ccc--------cchhhhhHHhhhhhhhhc-ccc-c-ccccccccccccccccccCCc-cccCCCCCCEEECCC
Confidence 777663 221 346677777777777776 344 2 566777777777777776543 233344444556677
Q ss_pred CcccC
Q 042825 257 NCFCL 261 (631)
Q Consensus 257 n~~~~ 261 (631)
|+++.
T Consensus 182 N~i~~ 186 (199)
T d2omxa2 182 NKVSD 186 (199)
T ss_dssp SCCCC
T ss_pred CCCCC
Confidence 76553
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Probab=99.30 E-value=2.7e-12 Score=132.68 Aligned_cols=142 Identities=23% Similarity=0.352 Sum_probs=105.3
Q ss_pred CCeEEEEeCCCCCcccCcchhcCCccCceeecccCcccCCCC-cCcccccccccccccceecCCCCCCcCCCCCCcEEEc
Q 042825 97 GQVTNIELQDQNRKGTVPPILKKLSSMAVMYLENNQLRGPIP-SLVGSLEFFSAYEANISGTIPDFIGTDTFPQLSYLDL 175 (631)
Q Consensus 97 ~~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~L~~N~l~g~lP-~~~~~L~~L~l~~n~l~g~ip~~~~~~~l~~L~~L~L 175 (631)
.+++.|++++|.+++..+ ++.+++|++|++++|++++..| ..+..++.+++..|++++ ++ .+. .+++++.|+|
T Consensus 241 ~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~~~l~~~~~~~~~~~l~~l~~~~n~l~~-~~-~~~--~~~~l~~L~l 314 (384)
T d2omza2 241 TNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLED-IS-PIS--NLKNLTYLTL 314 (384)
T ss_dssp TTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCGGGTTCTTCSEEECCSSCCSC-CG-GGG--GCTTCSEEEC
T ss_pred cccchhccccCccCCCCc--ccccccCCEeeccCcccCCCCcccccccccccccccccccc-cc-ccc--hhcccCeEEC
Confidence 467888888888886433 7888889999999998885332 123377888888888875 22 344 6788999999
Q ss_pred cCCcccccCCCCCCCCccCcCCCCCCCEEEeecCcCcccCChhhccCCCCCCEEEccCCCCcccCCCCCCCCceEEeecC
Q 042825 176 GNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNNLLQGPTPRFNNSKLTVDMRTG 255 (631)
Q Consensus 176 s~N~l~g~iP~~~~~~~~~~~~l~~L~~L~L~~N~l~g~iP~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~~~~~~l~~~ 255 (631)
++|++++ +++ +.++++|++|+|++|+++ .+| . +..+++|++|++++|+|++.+| +..+.....++++
T Consensus 315 s~n~l~~-l~~--------l~~l~~L~~L~L~~n~l~-~l~-~-l~~l~~L~~L~l~~N~l~~l~~-l~~l~~L~~L~L~ 381 (384)
T d2omza2 315 YFNNISD-ISP--------VSSLTKLQRLFFANNKVS-DVS-S-LANLTNINWLSAGHNQISDLTP-LANLTRITQLGLN 381 (384)
T ss_dssp CSSCCSC-CGG--------GGGCTTCCEEECCSSCCC-CCG-G-GGGCTTCCEEECCSSCCCBCGG-GTTCTTCSEEECC
T ss_pred CCCCCCC-Ccc--------cccCCCCCEEECCCCCCC-CCh-h-HcCCCCCCEEECCCCcCCCChh-hccCCCCCEeeCC
Confidence 9999984 432 457889999999999998 466 3 7889999999999999988765 4444444556667
Q ss_pred CC
Q 042825 256 SN 257 (631)
Q Consensus 256 ~n 257 (631)
+|
T Consensus 382 ~N 383 (384)
T d2omza2 382 DQ 383 (384)
T ss_dssp CE
T ss_pred CC
Confidence 66
|
| >d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: U2A'-like domain: Splicesomal U2A' protein species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.30 E-value=9.1e-13 Score=119.61 Aligned_cols=107 Identities=18% Similarity=0.231 Sum_probs=54.5
Q ss_pred CeEEEEeCCCCCcccCcchhcCCccCceeecccCcccCCCCcCcccccccccccccceecCCCCCCcCCCCCCcEEEccC
Q 042825 98 QVTNIELQDQNRKGTVPPILKKLSSMAVMYLENNQLRGPIPSLVGSLEFFSAYEANISGTIPDFIGTDTFPQLSYLDLGN 177 (631)
Q Consensus 98 ~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~L~~N~l~g~lP~~~~~L~~L~l~~n~l~g~ip~~~~~~~l~~L~~L~Ls~ 177 (631)
++..|+|++|.++ .+|..+..+++|++|+|++|+|+ . ++ .+. .+++|++|+|++
T Consensus 19 ~lr~L~L~~n~I~-~i~~~~~~l~~L~~L~Ls~N~i~-~---------------------l~-~~~--~l~~L~~L~ls~ 72 (162)
T d1a9na_ 19 RDRELDLRGYKIP-VIENLGATLDQFDAIDFSDNEIR-K---------------------LD-GFP--LLRRLKTLLVNN 72 (162)
T ss_dssp SCEEEECTTSCCC-SCCCGGGGTTCCSEEECCSSCCC-E---------------------EC-CCC--CCSSCCEEECCS
T ss_pred cCcEEECCCCCCC-ccCccccccccCCEEECCCCCCC-c---------------------cC-Ccc--cCcchhhhhccc
Confidence 3455555555555 34444445555555555555554 2 22 233 455566666666
Q ss_pred CcccccCCCCCCCCccCcCCCCCCCEEEeecCcCcccCCh-hhccCCCCCCEEEccCCCCcc
Q 042825 178 NNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPV-SSFNNHPKLTTLNLTNNLLQG 238 (631)
Q Consensus 178 N~l~g~iP~~~~~~~~~~~~l~~L~~L~L~~N~l~g~iP~-~~~~~l~~L~~L~ls~N~l~g 238 (631)
|+++ .+|+.+ +..+++|++|+|++|+++ .++. ..+..+++|++|++++|.++.
T Consensus 73 N~i~-~l~~~~------~~~l~~L~~L~L~~N~i~-~~~~l~~l~~l~~L~~L~l~~N~i~~ 126 (162)
T d1a9na_ 73 NRIC-RIGEGL------DQALPDLTELILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVTN 126 (162)
T ss_dssp SCCC-EECSCH------HHHCTTCCEEECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGGG
T ss_pred cccc-CCCccc------cccccccccceecccccc-ccccccccccccccchhhcCCCcccc
Confidence 6665 444322 224555666666666655 3332 124555566666666665543
|
| >d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: U2A'-like domain: Splicesomal U2A' protein species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.28 E-value=2.3e-12 Score=116.88 Aligned_cols=112 Identities=19% Similarity=0.166 Sum_probs=84.8
Q ss_pred hhcCCccCceeecccCcccCCCCcCcccccccccccccceecCCCCCCcCCCCCCcEEEccCCcccccCCCCCCCCccCc
Q 042825 116 ILKKLSSMAVMYLENNQLRGPIPSLVGSLEFFSAYEANISGTIPDFIGTDTFPQLSYLDLGNNNLQGTIPSSFGMPFADI 195 (631)
Q Consensus 116 ~~~~l~~L~~L~L~~N~l~g~lP~~~~~L~~L~l~~n~l~g~ip~~~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~~~~~~ 195 (631)
.+.++.+|++|+|++|+|+ .||..+. .+++|+.|||++|+++ .++. +
T Consensus 13 ~~~n~~~lr~L~L~~n~I~----------------------~i~~~~~--~l~~L~~L~Ls~N~i~-~l~~--------~ 59 (162)
T d1a9na_ 13 QYTNAVRDRELDLRGYKIP----------------------VIENLGA--TLDQFDAIDFSDNEIR-KLDG--------F 59 (162)
T ss_dssp EEECTTSCEEEECTTSCCC----------------------SCCCGGG--GTTCCSEEECCSSCCC-EECC--------C
T ss_pred hccCcCcCcEEECCCCCCC----------------------ccCcccc--ccccCCEEECCCCCCC-ccCC--------c
Confidence 3556667777777777776 3443333 6889999999999999 6752 4
Q ss_pred CCCCCCCEEEeecCcCcccCChhhccCCCCCCEEEccCCCCccc--CCCCCCCCceEEeecCCCcccC
Q 042825 196 SNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNNLLQGP--TPRFNNSKLTVDMRTGSNCFCL 261 (631)
Q Consensus 196 ~~l~~L~~L~L~~N~l~g~iP~~~~~~l~~L~~L~ls~N~l~g~--~p~~~~~~~~~~l~~~~n~~~~ 261 (631)
..+++|++|+|++|+++ .+|...+..+++|+.|++++|+++.. +..+..+.....+++++|.++.
T Consensus 60 ~~l~~L~~L~ls~N~i~-~l~~~~~~~l~~L~~L~L~~N~i~~~~~l~~l~~l~~L~~L~l~~N~i~~ 126 (162)
T d1a9na_ 60 PLLRRLKTLLVNNNRIC-RIGEGLDQALPDLTELILTNNSLVELGDLDPLASLKSLTYLCILRNPVTN 126 (162)
T ss_dssp CCCSSCCEEECCSSCCC-EECSCHHHHCTTCCEEECCSCCCCCGGGGGGGGGCTTCCEEECCSSGGGG
T ss_pred ccCcchhhhhccccccc-CCCccccccccccccceeccccccccccccccccccccchhhcCCCcccc
Confidence 58999999999999999 56666577899999999999999753 2233333445567789998875
|
| >d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin H species: Listeria monocytogenes [TaxId: 1639]
Probab=99.26 E-value=7.4e-12 Score=120.10 Aligned_cols=125 Identities=24% Similarity=0.412 Sum_probs=70.1
Q ss_pred CeEEEEeCCCCCcccCcchhcCCccCceeecccCcccCCCCc-CcccccccccccccceecCCCCCCcCCCCCCcEEEcc
Q 042825 98 QVTNIELQDQNRKGTVPPILKKLSSMAVMYLENNQLRGPIPS-LVGSLEFFSAYEANISGTIPDFIGTDTFPQLSYLDLG 176 (631)
Q Consensus 98 ~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~L~~N~l~g~lP~-~~~~L~~L~l~~n~l~g~ip~~~~~~~l~~L~~L~Ls 176 (631)
+++.+++++|.++ .++ .+..+++|+.+++++|...+..+- ....+..+.++.+++....+ +. .+++|+.|+++
T Consensus 86 ~l~~l~~~~n~~~-~i~-~l~~l~~L~~l~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~--~~--~~~~L~~L~l~ 159 (227)
T d1h6ua2 86 KITELELSGNPLK-NVS-AIAGLQSIKTLDLTSTQITDVTPLAGLSNLQVLYLDLNQITNISP--LA--GLTNLQYLSIG 159 (227)
T ss_dssp SCCEEECCSCCCS-CCG-GGTTCTTCCEEECTTSCCCCCGGGTTCTTCCEEECCSSCCCCCGG--GG--GCTTCCEEECC
T ss_pred ccccccccccccc-ccc-cccccccccccccccccccccchhccccchhhhhchhhhhchhhh--hc--ccccccccccc
Confidence 4455555555554 333 355566666666666655532221 11245555555555543222 22 45667777777
Q ss_pred CCcccccCCCCCCCCccCcCCCCCCCEEEeecCcCcccCChhhccCCCCCCEEEccCCCCcccC
Q 042825 177 NNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNNLLQGPT 240 (631)
Q Consensus 177 ~N~l~g~iP~~~~~~~~~~~~l~~L~~L~L~~N~l~g~iP~~~~~~l~~L~~L~ls~N~l~g~~ 240 (631)
+|.+++ ++ .++++++|+.|+|++|+++ .+| . +..+++|++|+|++|++++..
T Consensus 160 ~n~~~~-~~--------~l~~l~~L~~L~Ls~n~l~-~l~-~-l~~l~~L~~L~Ls~N~lt~i~ 211 (227)
T d1h6ua2 160 NAQVSD-LT--------PLANLSKLTTLKADDNKIS-DIS-P-LASLPNLIEVHLKNNQISDVS 211 (227)
T ss_dssp SSCCCC-CG--------GGTTCTTCCEEECCSSCCC-CCG-G-GGGCTTCCEEECTTSCCCBCG
T ss_pred cccccc-ch--------hhcccccceecccCCCccC-CCh-h-hcCCCCCCEEECcCCcCCCCc
Confidence 776652 22 1346677777777777776 354 2 666777777777777776543
|
| >d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Probab=99.25 E-value=9.1e-12 Score=118.03 Aligned_cols=143 Identities=22% Similarity=0.339 Sum_probs=72.3
Q ss_pred CeEEEEeCCCCCcccCcchhcCCccCceeecccCcccCCCCc--CcccccccccccccceecCCCCCCcCCCCCCcEEEc
Q 042825 98 QVTNIELQDQNRKGTVPPILKKLSSMAVMYLENNQLRGPIPS--LVGSLEFFSAYEANISGTIPDFIGTDTFPQLSYLDL 175 (631)
Q Consensus 98 ~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~L~~N~l~g~lP~--~~~~L~~L~l~~n~l~g~ip~~~~~~~l~~L~~L~L 175 (631)
.++.|+++++.++. ++ .+..+++|++|+|++|+|++ ++. .+.+|+.|++++|++++ +| .+. .+++|+.|++
T Consensus 47 ~L~~L~l~~~~i~~-l~-~l~~l~~L~~L~L~~n~i~~-l~~~~~l~~L~~L~l~~n~i~~-l~-~l~--~l~~L~~L~l 119 (210)
T d1h6ta2 47 SIDQIIANNSDIKS-VQ-GIQYLPNVTKLFLNGNKLTD-IKPLANLKNLGWLFLDENKVKD-LS-SLK--DLKKLKSLSL 119 (210)
T ss_dssp TCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCC-CGGGTTCTTCCEEECCSSCCCC-GG-GGT--TCTTCCEEEC
T ss_pred CccEEECcCCCCCC-ch-hHhhCCCCCEEeCCCccccC-ccccccCccccccccccccccc-cc-ccc--cccccccccc
Confidence 35556666665553 22 25556666666666666653 222 12256666666666553 33 233 4556666666
Q ss_pred cCCcccccCCCCCCCCccCcCCCCCCCEEEeecCcCcccCChhhccCCCCCCEEEccCCCCcccCCCCCCCCceEEeecC
Q 042825 176 GNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNNLLQGPTPRFNNSKLTVDMRTG 255 (631)
Q Consensus 176 s~N~l~g~iP~~~~~~~~~~~~l~~L~~L~L~~N~l~g~iP~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~~~~~~l~~~ 255 (631)
++|.+. .++ .+.++++|+.+++++|.+++ ++ .+..+++|+.+++++|++++.. .+..+.....++++
T Consensus 120 ~~~~~~-~~~--------~l~~l~~l~~l~~~~n~l~~-~~--~~~~l~~L~~l~l~~n~l~~i~-~l~~l~~L~~L~Ls 186 (210)
T d1h6ta2 120 EHNGIS-DIN--------GLVHLPQLESLYLGNNKITD-IT--VLSRLTKLDTLSLEDNQISDIV-PLAGLTKLQNLYLS 186 (210)
T ss_dssp TTSCCC-CCG--------GGGGCTTCCEEECCSSCCCC-CG--GGGGCTTCSEEECCSSCCCCCG-GGTTCTTCCEEECC
T ss_pred cccccc-ccc--------cccccccccccccccccccc-cc--cccccccccccccccccccccc-cccCCCCCCEEECC
Confidence 666554 332 13355555666666665553 22 1445555666666666555432 23333333344455
Q ss_pred CCccc
Q 042825 256 SNCFC 260 (631)
Q Consensus 256 ~n~~~ 260 (631)
+|++.
T Consensus 187 ~N~i~ 191 (210)
T d1h6ta2 187 KNHIS 191 (210)
T ss_dssp SSCCC
T ss_pred CCCCC
Confidence 55543
|
| >d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Probab=99.25 E-value=8.9e-12 Score=117.03 Aligned_cols=124 Identities=22% Similarity=0.420 Sum_probs=103.3
Q ss_pred CCeEEEEeCCCCCcccCcchhcCCccCceeecccCcccCCCCc--CcccccccccccccceecCCCCCCcCCCCCCcEEE
Q 042825 97 GQVTNIELQDQNRKGTVPPILKKLSSMAVMYLENNQLRGPIPS--LVGSLEFFSAYEANISGTIPDFIGTDTFPQLSYLD 174 (631)
Q Consensus 97 ~~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~L~~N~l~g~lP~--~~~~L~~L~l~~n~l~g~ip~~~~~~~l~~L~~L~ 174 (631)
.+++.|+|++|.+++ +++ ++++++|++|++++|.+. .+|. .+.+|+.|++++|.+.... .+. .+++|+.|+
T Consensus 62 ~nL~~L~Ls~N~l~~-~~~-l~~l~~L~~L~l~~n~~~-~~~~l~~l~~L~~L~l~~~~~~~~~--~~~--~l~~L~~L~ 134 (199)
T d2omxa2 62 NNLTQINFSNNQLTD-ITP-LKNLTKLVDILMNNNQIA-DITPLANLTNLTGLTLFNNQITDID--PLK--NLTNLNRLE 134 (199)
T ss_dssp TTCCEEECCSSCCCC-CGG-GTTCTTCCEEECCSSCCC-CCGGGTTCTTCSEEECCSSCCCCCG--GGT--TCTTCSEEE
T ss_pred CCcCcCccccccccC-ccc-ccCCcccccccccccccc-ccccccccccccccccccccccccc--ccc--hhhhhHHhh
Confidence 589999999999996 443 999999999999999987 4553 2348999999999887532 344 789999999
Q ss_pred ccCCcccccCCCCCCCCccCcCCCCCCCEEEeecCcCcccCChhhccCCCCCCEEEccCCCCccc
Q 042825 175 LGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNNLLQGP 239 (631)
Q Consensus 175 Ls~N~l~g~iP~~~~~~~~~~~~l~~L~~L~L~~N~l~g~iP~~~~~~l~~L~~L~ls~N~l~g~ 239 (631)
+++|++. .+|. +..+++|+.|++++|++++ ++ . ++.+++|+.|++++|+++..
T Consensus 135 l~~n~l~-~~~~--------l~~~~~L~~L~l~~n~l~~-l~-~-l~~l~~L~~L~ls~N~i~~i 187 (199)
T d2omxa2 135 LSSNTIS-DISA--------LSGLTSLQQLNFSSNQVTD-LK-P-LANLTTLERLDISSNKVSDI 187 (199)
T ss_dssp CCSSCCC-CCGG--------GTTCTTCSEEECCSSCCCC-CG-G-GTTCTTCCEEECCSSCCCCC
T ss_pred hhhhhhc-cccc--------ccccccccccccccccccC-Cc-c-ccCCCCCCEEECCCCCCCCC
Confidence 9999998 4542 4589999999999999994 55 3 88999999999999999873
|
| >d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Probab=99.25 E-value=7.4e-12 Score=118.66 Aligned_cols=130 Identities=27% Similarity=0.401 Sum_probs=104.8
Q ss_pred CCeEEEEeCCCCCcccCcchhcCCccCceeecccCcccCCCCcC--cccccccccccccceecCCCCCCcCCCCCCcEEE
Q 042825 97 GQVTNIELQDQNRKGTVPPILKKLSSMAVMYLENNQLRGPIPSL--VGSLEFFSAYEANISGTIPDFIGTDTFPQLSYLD 174 (631)
Q Consensus 97 ~~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~L~~N~l~g~lP~~--~~~L~~L~l~~n~l~g~ip~~~~~~~l~~L~~L~ 174 (631)
.+++.|+|++|.+++ ++ .+++|++|++|++++|++++ +|.. +.+|+.|++++|.+.. ++ .+. .+++|+.++
T Consensus 68 ~~L~~L~L~~n~i~~-l~-~~~~l~~L~~L~l~~n~i~~-l~~l~~l~~L~~L~l~~~~~~~-~~-~l~--~l~~l~~l~ 140 (210)
T d1h6ta2 68 PNVTKLFLNGNKLTD-IK-PLANLKNLGWLFLDENKVKD-LSSLKDLKKLKSLSLEHNGISD-IN-GLV--HLPQLESLY 140 (210)
T ss_dssp TTCCEEECCSSCCCC-CG-GGTTCTTCCEEECCSSCCCC-GGGGTTCTTCCEEECTTSCCCC-CG-GGG--GCTTCCEEE
T ss_pred CCCCEEeCCCccccC-cc-ccccCccccccccccccccc-cccccccccccccccccccccc-cc-ccc--ccccccccc
Confidence 479999999999996 55 37899999999999999984 5542 3489999999998863 33 355 788999999
Q ss_pred ccCCcccccCCCCCCCCccCcCCCCCCCEEEeecCcCcccCChhhccCCCCCCEEEccCCCCcccCCCCCCC
Q 042825 175 LGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNNLLQGPTPRFNNS 246 (631)
Q Consensus 175 Ls~N~l~g~iP~~~~~~~~~~~~l~~L~~L~L~~N~l~g~iP~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~ 246 (631)
+++|.+++ ++ .+.++++|+.+++++|++++ ++ . +..+++|+.|+|++|+++. +|.+..+
T Consensus 141 ~~~n~l~~-~~--------~~~~l~~L~~l~l~~n~l~~-i~-~-l~~l~~L~~L~Ls~N~i~~-l~~l~~l 199 (210)
T d1h6ta2 141 LGNNKITD-IT--------VLSRLTKLDTLSLEDNQISD-IV-P-LAGLTKLQNLYLSKNHISD-LRALAGL 199 (210)
T ss_dssp CCSSCCCC-CG--------GGGGCTTCSEEECCSSCCCC-CG-G-GTTCTTCCEEECCSSCCCB-CGGGTTC
T ss_pred cccccccc-cc--------cccccccccccccccccccc-cc-c-ccCCCCCCEEECCCCCCCC-ChhhcCC
Confidence 99999983 33 14588999999999999995 55 2 7899999999999999985 4555444
|
| >d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain domain: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.23 E-value=5.8e-12 Score=108.71 Aligned_cols=101 Identities=24% Similarity=0.351 Sum_probs=78.8
Q ss_pred ccccccccceecCCCCCCcCCCCCCcEEEccCCcccccCCCCCCCCccCcCCCCCCCEEEeecCcCcccCChhhccCCCC
Q 042825 146 FFSAYEANISGTIPDFIGTDTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPK 225 (631)
Q Consensus 146 ~L~l~~n~l~g~ip~~~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~~~~~~~~l~~L~~L~L~~N~l~g~iP~~~~~~l~~ 225 (631)
+|+|++|+++ .+| .+. .+++|++|||++|+|+ .+|+.+ +.+++|++|++++|+++ .+| . +..+++
T Consensus 2 ~L~Ls~n~l~-~l~-~l~--~l~~L~~L~ls~N~l~-~lp~~~-------~~l~~L~~L~l~~N~i~-~l~-~-~~~l~~ 66 (124)
T d1dcea3 2 VLHLAHKDLT-VLC-HLE--QLLLVTHLDLSHNRLR-ALPPAL-------AALRCLEVLQASDNALE-NVD-G-VANLPR 66 (124)
T ss_dssp EEECTTSCCS-SCC-CGG--GGTTCCEEECCSSCCC-CCCGGG-------GGCTTCCEEECCSSCCC-CCG-G-GTTCSS
T ss_pred EEEcCCCCCC-CCc-ccc--cCCCCCEEECCCCccC-cchhhh-------hhhhccccccccccccc-ccC-c-cccccc
Confidence 4555555555 444 355 7899999999999999 788654 58999999999999999 577 4 889999
Q ss_pred CCEEEccCCCCcccCC--CCCCCCceEEeecCCCcccC
Q 042825 226 LTTLNLTNNLLQGPTP--RFNNSKLTVDMRTGSNCFCL 261 (631)
Q Consensus 226 L~~L~ls~N~l~g~~p--~~~~~~~~~~l~~~~n~~~~ 261 (631)
|+.|++++|+++.... .+........+++++|+++.
T Consensus 67 L~~L~l~~N~i~~~~~~~~l~~~~~L~~L~l~~N~i~~ 104 (124)
T d1dcea3 67 LQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQ 104 (124)
T ss_dssp CCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGG
T ss_pred cCeEECCCCccCCCCCchhhcCCCCCCEEECCCCcCCc
Confidence 9999999999986532 23333445567789999886
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Probab=99.20 E-value=1.6e-11 Score=126.82 Aligned_cols=185 Identities=22% Similarity=0.303 Sum_probs=129.2
Q ss_pred eecccceeehhhhcc--ccchhhhhhhhhhhccccccccccCCCCCCCChhhHHHHHHHHHhCCCCCCCCCCCCCCCCcc
Q 042825 12 QLFGFPRLTFRDCMT--ATSELEREKTERVQGDRRKKRRKIPSASSNQSRPDAAVMQDLKASFVIPKRLKWSDPDPCQWS 89 (631)
Q Consensus 12 ~~~~~~~~~~~~~~~--~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~k~~~~~~~~~~w~~~~~C~w~ 89 (631)
.+.++..+.+.++.. ..+.....+|+.|++++|+++. ++. ..... .+.+-.-..|.+.
T Consensus 195 ~l~~~~~l~l~~n~i~~~~~~~~~~~L~~L~l~~n~l~~-~~~-l~~l~------------------~L~~L~l~~n~l~ 254 (384)
T d2omza2 195 KLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKD-IGT-LASLT------------------NLTDLDLANNQIS 254 (384)
T ss_dssp GCTTCSEEECCSSCCCCCGGGGGCTTCCEEECCSSCCCC-CGG-GGGCT------------------TCSEEECCSSCCC
T ss_pred cccccceeeccCCccCCCCcccccCCCCEEECCCCCCCC-cch-hhccc------------------ccchhccccCccC
Confidence 445555666655532 2334455889999999998884 221 11010 0000000111111
Q ss_pred ce-eeCCCCCeEEEEeCCCCCcccCcchhcCCccCceeecccCcccCCCCc--CcccccccccccccceecCCCCCCcCC
Q 042825 90 HV-ICSDDGQVTNIELQDQNRKGTVPPILKKLSSMAVMYLENNQLRGPIPS--LVGSLEFFSAYEANISGTIPDFIGTDT 166 (631)
Q Consensus 90 gv-~C~~~~~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~L~~N~l~g~lP~--~~~~L~~L~l~~n~l~g~ip~~~~~~~ 166 (631)
++ ......+++.|+++++.+++. + .+.++..++.++++.|.+++ ++. ...+++.|++++|++++..| +. .
T Consensus 255 ~~~~~~~~~~L~~L~l~~~~l~~~-~-~~~~~~~l~~l~~~~n~l~~-~~~~~~~~~l~~L~ls~n~l~~l~~--l~--~ 327 (384)
T d2omza2 255 NLAPLSGLTKLTELKLGANQISNI-S-PLAGLTALTNLELNENQLED-ISPISNLKNLTYLTLYFNNISDISP--VS--S 327 (384)
T ss_dssp CCGGGTTCTTCSEEECCSSCCCCC-G-GGTTCTTCSEEECCSSCCSC-CGGGGGCTTCSEEECCSSCCSCCGG--GG--G
T ss_pred CCCcccccccCCEeeccCcccCCC-C-cccccccccccccccccccc-ccccchhcccCeEECCCCCCCCCcc--cc--c
Confidence 11 112235799999999999864 3 37889999999999999986 332 33489999999999997433 55 7
Q ss_pred CCCCcEEEccCCcccccCCCCCCCCccCcCCCCCCCEEEeecCcCcccCChhhccCCCCCCEEEccCCC
Q 042825 167 FPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNNL 235 (631)
Q Consensus 167 l~~L~~L~Ls~N~l~g~iP~~~~~~~~~~~~l~~L~~L~L~~N~l~g~iP~~~~~~l~~L~~L~ls~N~ 235 (631)
+++|+.|+|++|+|+ .+| . ++++++|++|+|++|++++..| +.++++|+.|+|++|.
T Consensus 328 l~~L~~L~L~~n~l~-~l~-~-------l~~l~~L~~L~l~~N~l~~l~~---l~~l~~L~~L~L~~Na 384 (384)
T d2omza2 328 LTKLQRLFFANNKVS-DVS-S-------LANLTNINWLSAGHNQISDLTP---LANLTRITQLGLNDQA 384 (384)
T ss_dssp CTTCCEEECCSSCCC-CCG-G-------GGGCTTCCEEECCSSCCCBCGG---GTTCTTCSEEECCCEE
T ss_pred CCCCCEEECCCCCCC-CCh-h-------HcCCCCCCEEECCCCcCCCChh---hccCCCCCEeeCCCCc
Confidence 999999999999998 555 2 5689999999999999996544 7899999999999984
|
| >d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin H species: Listeria monocytogenes [TaxId: 1639]
Probab=99.20 E-value=3.1e-11 Score=115.64 Aligned_cols=154 Identities=16% Similarity=0.239 Sum_probs=90.7
Q ss_pred CeEEEEeCCCCCcccCcchhcCCccCceeecccCcccCCCC-cCcccccccccccccceecCCCCCCcCCCCCCcEEEcc
Q 042825 98 QVTNIELQDQNRKGTVPPILKKLSSMAVMYLENNQLRGPIP-SLVGSLEFFSAYEANISGTIPDFIGTDTFPQLSYLDLG 176 (631)
Q Consensus 98 ~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~L~~N~l~g~lP-~~~~~L~~L~l~~n~l~g~ip~~~~~~~l~~L~~L~Ls 176 (631)
+++.|++.+|+++ .++ .+.+|++|++|+|++|++++..| ..+.+|++|++++|.++ .++ .+. .+++|+.|+++
T Consensus 42 ~L~~L~l~~~~i~-~l~-~l~~l~~L~~L~ls~n~i~~~~~l~~l~~l~~l~~~~n~~~-~i~-~l~--~l~~L~~l~l~ 115 (227)
T d1h6ua2 42 GITTLSAFGTGVT-TIE-GVQYLNNLIGLELKDNQITDLAPLKNLTKITELELSGNPLK-NVS-AIA--GLQSIKTLDLT 115 (227)
T ss_dssp TCCEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCCGGGTTCCSCCEEECCSCCCS-CCG-GGT--TCTTCCEEECT
T ss_pred CcCEEECCCCCCC-cch-hHhcCCCCcEeecCCceeecccccccccccccccccccccc-ccc-ccc--ccccccccccc
Confidence 3455555555555 232 35555555555555555553322 12225555555555544 232 223 45555555555
Q ss_pred CCcccccCCCCCC-------------CCccCcCCCCCCCEEEeecCcCcccCChhhccCCCCCCEEEccCCCCcccCCCC
Q 042825 177 NNNLQGTIPSSFG-------------MPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNNLLQGPTPRF 243 (631)
Q Consensus 177 ~N~l~g~iP~~~~-------------~~~~~~~~l~~L~~L~L~~N~l~g~iP~~~~~~l~~L~~L~ls~N~l~g~~p~~ 243 (631)
+|...+..+-... .....+.++++|+.|++++|++++ ++ . +..+++|+.|+|++|++++. |.+
T Consensus 116 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~~~~-~~-~-l~~l~~L~~L~Ls~n~l~~l-~~l 191 (227)
T d1h6ua2 116 STQITDVTPLAGLSNLQVLYLDLNQITNISPLAGLTNLQYLSIGNAQVSD-LT-P-LANLSKLTTLKADDNKISDI-SPL 191 (227)
T ss_dssp TSCCCCCGGGTTCTTCCEEECCSSCCCCCGGGGGCTTCCEEECCSSCCCC-CG-G-GTTCTTCCEEECCSSCCCCC-GGG
T ss_pred cccccccchhccccchhhhhchhhhhchhhhhcccccccccccccccccc-ch-h-hcccccceecccCCCccCCC-hhh
Confidence 5555422111000 011225678999999999999984 44 2 78999999999999999874 445
Q ss_pred CCCCceEEeecCCCcccC
Q 042825 244 NNSKLTVDMRTGSNCFCL 261 (631)
Q Consensus 244 ~~~~~~~~l~~~~n~~~~ 261 (631)
..+.....+++++|+++.
T Consensus 192 ~~l~~L~~L~Ls~N~lt~ 209 (227)
T d1h6ua2 192 ASLPNLIEVHLKNNQISD 209 (227)
T ss_dssp GGCTTCCEEECTTSCCCB
T ss_pred cCCCCCCEEECcCCcCCC
Confidence 445556677889998875
|
| >d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: High affinity nerve growth factor receptor, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.10 E-value=1.1e-10 Score=104.95 Aligned_cols=103 Identities=18% Similarity=0.231 Sum_probs=65.4
Q ss_pred EEeCCCCCcccCcchhcCCccCceeecccCc-ccCCCCcCcccccccccccccceecCCCCCCcCCCCCCcEEEccCCcc
Q 042825 102 IELQDQNRKGTVPPILKKLSSMAVMYLENNQ-LRGPIPSLVGSLEFFSAYEANISGTIPDFIGTDTFPQLSYLDLGNNNL 180 (631)
Q Consensus 102 l~l~~n~l~g~ip~~~~~l~~L~~L~L~~N~-l~g~lP~~~~~L~~L~l~~n~l~g~ip~~~~~~~l~~L~~L~Ls~N~l 180 (631)
++.+++++. .+|..+..+++|+.|++++|+ |+ .++ +..|. .+++|+.|+|++|+|
T Consensus 13 l~c~~~~~~-~~p~~l~~l~~l~~L~l~~n~~l~-~i~--------------------~~~f~--~l~~L~~L~Ls~N~l 68 (156)
T d2ifga3 13 LRCTRDGAL-DSLHHLPGAENLTELYIENQQHLQ-HLE--------------------LRDLR--GLGELRNLTIVKSGL 68 (156)
T ss_dssp EECCSSCCC-TTTTTSCSCSCCSEEECCSCSSCC-EEC--------------------GGGSC--SCCCCSEEECCSSCC
T ss_pred EEecCCCCc-cCcccccCccccCeeecCCCcccc-ccC--------------------chhhc--cccccCcceeecccc
Confidence 333445555 456667777777777776553 55 221 22344 677888888888888
Q ss_pred cccCCCCCCCCccCcCCCCCCCEEEeecCcCcccCChhhccCCCCCCEEEccCCCCc
Q 042825 181 QGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNNLLQ 237 (631)
Q Consensus 181 ~g~iP~~~~~~~~~~~~l~~L~~L~L~~N~l~g~iP~~~~~~l~~L~~L~ls~N~l~ 237 (631)
+ .|++.. |.++++|++|+|++|+|+ .+|...|.. .+|+.|+|++|.|.
T Consensus 69 ~-~i~~~~------f~~l~~L~~L~Ls~N~l~-~l~~~~~~~-~~l~~L~L~~Np~~ 116 (156)
T d2ifga3 69 R-FVAPDA------FHFTPRLSRLNLSFNALE-SLSWKTVQG-LSLQELVLSGNPLH 116 (156)
T ss_dssp C-EECTTG------GGSCSCCCEEECCSSCCS-CCCSTTTCS-CCCCEEECCSSCCC
T ss_pred C-Cccccc------ccccccccceeccCCCCc-ccChhhhcc-ccccccccCCCccc
Confidence 7 554332 457778888888888887 677664543 35777777777653
|
| >d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Follicle-stimulating hormone receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.06 E-value=3.8e-10 Score=108.70 Aligned_cols=166 Identities=14% Similarity=0.160 Sum_probs=108.3
Q ss_pred CCccceeeCCC----------CCeEEEEeCCCCCcccCcchhcCCccCceeecccCcccCCCCcC-c---ccccccccc-
Q 042825 86 CQWSHVICSDD----------GQVTNIELQDQNRKGTVPPILKKLSSMAVMYLENNQLRGPIPSL-V---GSLEFFSAY- 150 (631)
Q Consensus 86 C~w~gv~C~~~----------~~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~L~~N~l~g~lP~~-~---~~L~~L~l~- 150 (631)
|....|.|... ..++.|+|++|.++..-+..|.++++|++|+|++|.+...+|.. + .+++.|.+.
T Consensus 8 C~~~~i~c~~~~l~~iP~~l~~~l~~L~Ls~n~i~~l~~~~f~~l~~L~~L~ls~n~~~~~i~~~~f~~l~~l~~l~~~~ 87 (242)
T d1xwdc1 8 CSNRVFLCQESKVTEIPSDLPRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEK 87 (242)
T ss_dssp ECSSEEEEESCSCSSCCSCSCSCCSEEEEESCCCCEECTTTTTTCTTCCEEEEESCTTCCEECSSSEESCTTCCEEEEEC
T ss_pred CcCCEEEEeCCCCCCcCCCCCCCCCEEECcCCcCCccChhHhhccchhhhhhhccccccceeeccccccccccccccccc
Confidence 55677788521 36899999999998433446899999999999999988766653 3 367777765
Q ss_pred cccceecCCCCCCcCCCCCCcEEEccCCcccccCCCCCCCCccCcCCCCCCCEEEeecCcCcccCChhhccCCC-CCCEE
Q 042825 151 EANISGTIPDFIGTDTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHP-KLTTL 229 (631)
Q Consensus 151 ~n~l~g~ip~~~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~~~~~~~~l~~L~~L~L~~N~l~g~iP~~~~~~l~-~L~~L 229 (631)
.|++....+..+. .+++|+.|++++|.+. .+|... .+..+..|..+..+++++. .++...|..++ .++.|
T Consensus 88 ~n~l~~~~~~~~~--~l~~L~~l~l~~~~l~-~~~~~~-----~~~~l~~l~~~~~~n~~l~-~i~~~~~~~~~~~l~~L 158 (242)
T d1xwdc1 88 ANNLLYINPEAFQ--NLPNLQYLLISNTGIK-HLPDVH-----KIHSLQKVLLDIQDNINIH-TIERNSFVGLSFESVIL 158 (242)
T ss_dssp CTTCCEECTTSEE--CCTTCCEEEEESCCCC-SCCCCT-----TTCBSSCEEEEEESCTTCC-EECTTSSTTSBSSCEEE
T ss_pred ccccccccccccc--ccccccccccchhhhc-cccccc-----ccccccccccccccccccc-cccccccccccccceee
Confidence 4677777777776 7899999999999998 454321 1334555555555666665 44434344443 56667
Q ss_pred EccCCCCcccCCCCCCCCceEEe-ecCCCccc
Q 042825 230 NLTNNLLQGPTPRFNNSKLTVDM-RTGSNCFC 260 (631)
Q Consensus 230 ~ls~N~l~g~~p~~~~~~~~~~l-~~~~n~~~ 260 (631)
++++|+++...+..........+ .+.+|.+.
T Consensus 159 ~l~~n~l~~i~~~~~~~~~l~~~~~l~~n~l~ 190 (242)
T d1xwdc1 159 WLNKNGIQEIHNCAFNGTQLDELNLSDNNNLE 190 (242)
T ss_dssp ECCSSCCCEECTTTTTTCCEEEEECTTCTTCC
T ss_pred ecccccccccccccccchhhhccccccccccc
Confidence 77777776655544433222222 33555554
|
| >d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: Outer arm dynein light chain 1 family: Outer arm dynein light chain 1 domain: Outer arm dynein light chain 1 species: Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]
Probab=99.04 E-value=1.5e-12 Score=122.35 Aligned_cols=117 Identities=22% Similarity=0.242 Sum_probs=94.2
Q ss_pred cCcchhcCCccCceeecccCcccCCCCc--CcccccccccccccceecCCCCCCcCCCCCCcEEEccCCcccccCCCCCC
Q 042825 112 TVPPILKKLSSMAVMYLENNQLRGPIPS--LVGSLEFFSAYEANISGTIPDFIGTDTFPQLSYLDLGNNNLQGTIPSSFG 189 (631)
Q Consensus 112 ~ip~~~~~l~~L~~L~L~~N~l~g~lP~--~~~~L~~L~l~~n~l~g~ip~~~~~~~l~~L~~L~Ls~N~l~g~iP~~~~ 189 (631)
.+|..+..|++|++|+|++|+|+ .++. .+.+|+.|++++|+++ .+|.... .+++|+.|++++|+++ .++.
T Consensus 39 ~l~~sl~~L~~L~~L~Ls~n~I~-~i~~l~~l~~L~~L~Ls~N~i~-~i~~~~~--~~~~L~~L~l~~N~i~-~l~~--- 110 (198)
T d1m9la_ 39 KMDATLSTLKACKHLALSTNNIE-KISSLSGMENLRILSLGRNLIK-KIENLDA--VADTLEELWISYNQIA-SLSG--- 110 (198)
T ss_dssp CCHHHHHHTTTCCEEECSEEEES-CCCCHHHHTTCCEEECCEEEEC-SCSSHHH--HHHHCCEEECSEEECC-CHHH---
T ss_pred hhhhHHhcccccceeECcccCCC-CcccccCCccccChhhcccccc-ccccccc--cccccccccccccccc-cccc---
Confidence 46678999999999999999998 5664 1238999999999987 5675444 4578999999999998 4542
Q ss_pred CCccCcCCCCCCCEEEeecCcCcccCCh-hhccCCCCCCEEEccCCCCcccCCC
Q 042825 190 MPFADISNLSTLEDLSLGHNKLTGIFPV-SSFNNHPKLTTLNLTNNLLQGPTPR 242 (631)
Q Consensus 190 ~~~~~~~~l~~L~~L~L~~N~l~g~iP~-~~~~~l~~L~~L~ls~N~l~g~~p~ 242 (631)
+.++++|++|+|++|+++ .++. ..+..+++|+.|+|++|.++...+.
T Consensus 111 -----~~~l~~L~~L~L~~N~i~-~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~ 158 (198)
T d1m9la_ 111 -----IEKLVNLRVLYMSNNKIT-NWGEIDKLAALDKLEDLLLAGNPLYNDYKE 158 (198)
T ss_dssp -----HHHHHHSSEEEESEEECC-CHHHHHHHTTTTTCSEEEECSSHHHHHHCT
T ss_pred -----ccccccccccccccchhc-cccccccccCCCccceeecCCCccccCccc
Confidence 458899999999999998 4542 3478999999999999998776554
|
| >d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Follicle-stimulating hormone receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.01 E-value=1e-09 Score=105.63 Aligned_cols=134 Identities=15% Similarity=0.167 Sum_probs=92.9
Q ss_pred CeEEEEeC-CCCCcccCcchhcCCccCceeecccCcccCCCCc-Ccc---cccccccccccceecCCCCCCcCCC-CCCc
Q 042825 98 QVTNIELQ-DQNRKGTVPPILKKLSSMAVMYLENNQLRGPIPS-LVG---SLEFFSAYEANISGTIPDFIGTDTF-PQLS 171 (631)
Q Consensus 98 ~l~~l~l~-~n~l~g~ip~~~~~l~~L~~L~L~~N~l~g~lP~-~~~---~L~~L~l~~n~l~g~ip~~~~~~~l-~~L~ 171 (631)
.+..+.+. .|++....+..|.++++|++|++++|.+...-+. .+. .+..+...++++...-+..+. .+ ..++
T Consensus 79 ~l~~l~~~~~n~l~~~~~~~~~~l~~L~~l~l~~~~l~~~~~~~~~~~l~~l~~~~~~n~~l~~i~~~~~~--~~~~~l~ 156 (242)
T d1xwdc1 79 KLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFV--GLSFESV 156 (242)
T ss_dssp TCCEEEEECCTTCCEECTTSEECCTTCCEEEEESCCCCSCCCCTTTCBSSCEEEEEESCTTCCEECTTSST--TSBSSCE
T ss_pred ccccccccccccccccccccccccccccccccchhhhcccccccccccccccccccccccccccccccccc--cccccce
Confidence 45666654 4677766777788999999999999988742221 222 444455566666644344443 33 4788
Q ss_pred EEEccCCcccccCCCCCCCCccCcCCCCCCCEE-EeecCcCcccCChhhccCCCCCCEEEccCCCCcccCCC
Q 042825 172 YLDLGNNNLQGTIPSSFGMPFADISNLSTLEDL-SLGHNKLTGIFPVSSFNNHPKLTTLNLTNNLLQGPTPR 242 (631)
Q Consensus 172 ~L~Ls~N~l~g~iP~~~~~~~~~~~~l~~L~~L-~L~~N~l~g~iP~~~~~~l~~L~~L~ls~N~l~g~~p~ 242 (631)
.|++++|+++ .++..+ .+..++..+ ++++|+++ .+|...|..+++|+.|+|++|+|+...+.
T Consensus 157 ~L~l~~n~l~-~i~~~~-------~~~~~l~~~~~l~~n~l~-~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~ 219 (242)
T d1xwdc1 157 ILWLNKNGIQ-EIHNCA-------FNGTQLDELNLSDNNNLE-ELPNDVFHGASGPVILDISRTRIHSLPSY 219 (242)
T ss_dssp EEECCSSCCC-EECTTT-------TTTCCEEEEECTTCTTCC-CCCTTTTTTSCCCSEEECTTSCCCCCCSS
T ss_pred eeeccccccc-cccccc-------ccchhhhccccccccccc-cccHHHhcCCCCCCEEECCCCcCCccCHH
Confidence 8999999998 666543 245555555 56788888 78877788899999999999999865444
|
| >d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: High affinity nerve growth factor receptor, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.00 E-value=5.2e-10 Score=100.29 Aligned_cols=93 Identities=20% Similarity=0.263 Sum_probs=74.9
Q ss_pred cCCCCCCcCCCCCCcEEEccCC-cccccCCCCCCCCccCcCCCCCCCEEEeecCcCcccCChhhccCCCCCCEEEccCCC
Q 042825 157 TIPDFIGTDTFPQLSYLDLGNN-NLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNNL 235 (631)
Q Consensus 157 ~ip~~~~~~~l~~L~~L~Ls~N-~l~g~iP~~~~~~~~~~~~l~~L~~L~L~~N~l~g~iP~~~~~~l~~L~~L~ls~N~ 235 (631)
.+|..+. .+++|++|+|++| .++ .|+.. .|.++++|+.|+|++|+|+ .|++..|..+++|++|+|++|+
T Consensus 22 ~~p~~l~--~l~~l~~L~l~~n~~l~-~i~~~------~f~~l~~L~~L~Ls~N~l~-~i~~~~f~~l~~L~~L~Ls~N~ 91 (156)
T d2ifga3 22 DSLHHLP--GAENLTELYIENQQHLQ-HLELR------DLRGLGELRNLTIVKSGLR-FVAPDAFHFTPRLSRLNLSFNA 91 (156)
T ss_dssp TTTTTSC--SCSCCSEEECCSCSSCC-EECGG------GSCSCCCCSEEECCSSCCC-EECTTGGGSCSCCCEEECCSSC
T ss_pred cCccccc--CccccCeeecCCCcccc-ccCch------hhccccccCcceeeccccC-CcccccccccccccceeccCCC
Confidence 4566665 6889999999876 488 67643 2568999999999999999 5665669999999999999999
Q ss_pred CcccCCCCCCCCceEEeecCCCcc
Q 042825 236 LQGPTPRFNNSKLTVDMRTGSNCF 259 (631)
Q Consensus 236 l~g~~p~~~~~~~~~~l~~~~n~~ 259 (631)
|+...+..........+++++|.+
T Consensus 92 l~~l~~~~~~~~~l~~L~L~~Np~ 115 (156)
T d2ifga3 92 LESLSWKTVQGLSLQELVLSGNPL 115 (156)
T ss_dssp CSCCCSTTTCSCCCCEEECCSSCC
T ss_pred CcccChhhhccccccccccCCCcc
Confidence 998777766554555678899976
|
| >d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: Outer arm dynein light chain 1 family: Outer arm dynein light chain 1 domain: Outer arm dynein light chain 1 species: Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]
Probab=98.89 E-value=1.1e-11 Score=116.36 Aligned_cols=122 Identities=21% Similarity=0.292 Sum_probs=96.4
Q ss_pred CCCeEEEEeCCCCCcccCcchhcCCccCceeecccCcccCCCCcCcc---cccccccccccceecCCCCCCcCCCCCCcE
Q 042825 96 DGQVTNIELQDQNRKGTVPPILKKLSSMAVMYLENNQLRGPIPSLVG---SLEFFSAYEANISGTIPDFIGTDTFPQLSY 172 (631)
Q Consensus 96 ~~~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~L~~N~l~g~lP~~~~---~L~~L~l~~n~l~g~ip~~~~~~~l~~L~~ 172 (631)
..+++.|+|++|+++ .++ .+..|++|++|+|++|+|+ .+|.... +|+.|++++|+++. ++ .+. .+++|+.
T Consensus 47 L~~L~~L~Ls~n~I~-~i~-~l~~l~~L~~L~Ls~N~i~-~i~~~~~~~~~L~~L~l~~N~i~~-l~-~~~--~l~~L~~ 119 (198)
T d1m9la_ 47 LKACKHLALSTNNIE-KIS-SLSGMENLRILSLGRNLIK-KIENLDAVADTLEELWISYNQIAS-LS-GIE--KLVNLRV 119 (198)
T ss_dssp TTTCCEEECSEEEES-CCC-CHHHHTTCCEEECCEEEEC-SCSSHHHHHHHCCEEECSEEECCC-HH-HHH--HHHHSSE
T ss_pred ccccceeECcccCCC-Ccc-cccCCccccChhhcccccc-cccccccccccccccccccccccc-cc-ccc--ccccccc
Confidence 357899999999998 565 5999999999999999998 6775443 79999999999984 43 244 6899999
Q ss_pred EEccCCcccccCCCCCCCCccCcCCCCCCCEEEeecCcCcccCChh---------hccCCCCCCEEE
Q 042825 173 LDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVS---------SFNNHPKLTTLN 230 (631)
Q Consensus 173 L~Ls~N~l~g~iP~~~~~~~~~~~~l~~L~~L~L~~N~l~g~iP~~---------~~~~l~~L~~L~ 230 (631)
|+|++|+++ .++.- ..+.++++|+.|+|++|.++...+.. .+..+++|+.||
T Consensus 120 L~L~~N~i~-~~~~~-----~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~r~~vi~~lp~L~~LD 180 (198)
T d1m9la_ 120 LYMSNNKIT-NWGEI-----DKLAALDKLEDLLLAGNPLYNDYKENNATSEYRIEVVKRLPNLKKLD 180 (198)
T ss_dssp EEESEEECC-CHHHH-----HHHTTTTTCSEEEECSSHHHHHHCTTTTHHHHHHHHHHHCSSCCEES
T ss_pred cccccchhc-ccccc-----ccccCCCccceeecCCCccccCcccccchhhHHHHHHHHCCCcCEeC
Confidence 999999998 44420 12568999999999999997544421 145688888886
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Probab=98.88 E-value=8.3e-09 Score=104.25 Aligned_cols=96 Identities=26% Similarity=0.447 Sum_probs=80.2
Q ss_pred CeEEEEeCCCCCcccCcchhcCCccCceeecccCcccCCCCcCcccccccccccccceecCCCCCCcCCCCCCcEEEccC
Q 042825 98 QVTNIELQDQNRKGTVPPILKKLSSMAVMYLENNQLRGPIPSLVGSLEFFSAYEANISGTIPDFIGTDTFPQLSYLDLGN 177 (631)
Q Consensus 98 ~l~~l~l~~n~l~g~ip~~~~~l~~L~~L~L~~N~l~g~lP~~~~~L~~L~l~~n~l~g~ip~~~~~~~l~~L~~L~Ls~ 177 (631)
+++.|||++++++ .+|+. +++|++|+|++|+|+ .+|..+++|+.|++++|+++ .++.. .+.|++|||++
T Consensus 39 ~l~~LdLs~~~L~-~lp~~---~~~L~~L~Ls~N~l~-~lp~~~~~L~~L~l~~n~l~-~l~~l-----p~~L~~L~L~~ 107 (353)
T d1jl5a_ 39 QAHELELNNLGLS-SLPEL---PPHLESLVASCNSLT-ELPELPQSLKSLLVDNNNLK-ALSDL-----PPLLEYLGVSN 107 (353)
T ss_dssp TCSEEECTTSCCS-CCCSC---CTTCSEEECCSSCCS-SCCCCCTTCCEEECCSSCCS-CCCSC-----CTTCCEEECCS
T ss_pred CCCEEEeCCCCCC-CCCCC---CCCCCEEECCCCCCc-ccccchhhhhhhhhhhcccc-hhhhh-----ccccccccccc
Confidence 5789999999998 68864 568899999999999 88999999999999999987 45531 24699999999
Q ss_pred CcccccCCCCCCCCccCcCCCCCCCEEEeecCcCcc
Q 042825 178 NNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTG 213 (631)
Q Consensus 178 N~l~g~iP~~~~~~~~~~~~l~~L~~L~L~~N~l~g 213 (631)
|.++ .+|. ++++++|+.|++++|.+++
T Consensus 108 n~l~-~lp~--------~~~l~~L~~L~l~~~~~~~ 134 (353)
T d1jl5a_ 108 NQLE-KLPE--------LQNSSFLKIIDVDNNSLKK 134 (353)
T ss_dssp SCCS-SCCC--------CTTCTTCCEEECCSSCCSC
T ss_pred cccc-cccc--------hhhhccceeeccccccccc
Confidence 9998 7774 3478999999999998874
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Probab=98.79 E-value=8.9e-09 Score=103.99 Aligned_cols=102 Identities=25% Similarity=0.326 Sum_probs=87.6
Q ss_pred ccCceeecccCcccCCCCcCcccccccccccccceecCCCCCCcCCCCCCcEEEccCCcccccCCCCCCCCccCcCCCCC
Q 042825 121 SSMAVMYLENNQLRGPIPSLVGSLEFFSAYEANISGTIPDFIGTDTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLST 200 (631)
Q Consensus 121 ~~L~~L~L~~N~l~g~lP~~~~~L~~L~l~~n~l~g~ip~~~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~~~~~~~~l~~ 200 (631)
.+|++|+|++|.|+ .+|+.+.+|+.|++++|+++ .+|+.+ .+|+.|++++|+++ .++.- .+.
T Consensus 38 ~~l~~LdLs~~~L~-~lp~~~~~L~~L~Ls~N~l~-~lp~~~-----~~L~~L~l~~n~l~-~l~~l----------p~~ 99 (353)
T d1jl5a_ 38 RQAHELELNNLGLS-SLPELPPHLESLVASCNSLT-ELPELP-----QSLKSLLVDNNNLK-ALSDL----------PPL 99 (353)
T ss_dssp HTCSEEECTTSCCS-CCCSCCTTCSEEECCSSCCS-SCCCCC-----TTCCEEECCSSCCS-CCCSC----------CTT
T ss_pred cCCCEEEeCCCCCC-CCCCCCCCCCEEECCCCCCc-ccccch-----hhhhhhhhhhcccc-hhhhh----------ccc
Confidence 46899999999998 79998889999999999999 788764 47999999999998 77632 156
Q ss_pred CCEEEeecCcCcccCChhhccCCCCCCEEEccCCCCcccCCCC
Q 042825 201 LEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNNLLQGPTPRF 243 (631)
Q Consensus 201 L~~L~L~~N~l~g~iP~~~~~~l~~L~~L~ls~N~l~g~~p~~ 243 (631)
|++|+|++|+++ .+|. ++.+++|+.|++++|.++...+..
T Consensus 100 L~~L~L~~n~l~-~lp~--~~~l~~L~~L~l~~~~~~~~~~~~ 139 (353)
T d1jl5a_ 100 LEYLGVSNNQLE-KLPE--LQNSSFLKIIDVDNNSLKKLPDLP 139 (353)
T ss_dssp CCEEECCSSCCS-SCCC--CTTCTTCCEEECCSSCCSCCCCCC
T ss_pred cccccccccccc-cccc--hhhhccceeecccccccccccccc
Confidence 999999999999 7883 678999999999999998766543
|
| >d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: RIO1-like kinases domain: Rio2 serine protein kinase C-terminal domain species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=98.58 E-value=6.3e-09 Score=96.36 Aligned_cols=32 Identities=19% Similarity=0.147 Sum_probs=28.6
Q ss_pred ccceeecCCCceEEEEEEecCCcEEEEEEEec
Q 042825 421 SEENRLGRGGVGTVYKGELKDGTEVGVKRMEL 452 (631)
Q Consensus 421 ~~~~~iG~G~fg~Vyk~~~~~g~~vAvK~l~~ 452 (631)
...+.||+|+||+||+|+..+|+.||||+++.
T Consensus 3 ~vg~~IG~G~~g~Vy~a~~~~g~~vAvKi~r~ 34 (191)
T d1zara2 3 AIGKLMGEGKESAVFNCYSEKFGECVVKFHKV 34 (191)
T ss_dssp EEEEEEEECSSEEEEEEEETTTEEEEEEEECC
T ss_pred hhCCEeeeCcceEEEEEECCCCCEEEEEEEec
Confidence 45789999999999999988999999998764
|
| >d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Cyclin A/CDK2-associated p19, Skp2 domain: Cyclin A/CDK2-associated p19, Skp2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.09 E-value=7.1e-07 Score=87.59 Aligned_cols=43 Identities=19% Similarity=0.104 Sum_probs=32.8
Q ss_pred CCCCCCCEEEeecC-cCcccCChhhccCCCCCCEEEccC-CCCccc
Q 042825 196 SNLSTLEDLSLGHN-KLTGIFPVSSFNNHPKLTTLNLTN-NLLQGP 239 (631)
Q Consensus 196 ~~l~~L~~L~L~~N-~l~g~iP~~~~~~l~~L~~L~ls~-N~l~g~ 239 (631)
.++++|++|+|++| .+++..+.. +..+++|++|+|++ +.++..
T Consensus 172 ~~~~~L~~L~L~~~~~itd~~~~~-l~~~~~L~~L~L~~C~~i~~~ 216 (284)
T d2astb2 172 RRCPNLVHLDLSDSVMLKNDCFQE-FFQLNYLQHLSLSRCYDIIPE 216 (284)
T ss_dssp HHCTTCSEEECTTCTTCCGGGGGG-GGGCTTCCEEECTTCTTCCGG
T ss_pred cccccccccccccccCCCchhhhh-hcccCcCCEEECCCCCCCChH
Confidence 46789999999886 477665544 77889999999998 456653
|
| >d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Rna1p (RanGAP1), N-terminal domain domain: Rna1p (RanGAP1), N-terminal domain species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Probab=98.05 E-value=1.3e-07 Score=95.54 Aligned_cols=155 Identities=17% Similarity=0.213 Sum_probs=101.3
Q ss_pred CCeEEEEeCCCCCccc----CcchhcCCccCceeecccCcccCCCCc----------------Cccccccccccccccee
Q 042825 97 GQVTNIELQDQNRKGT----VPPILKKLSSMAVMYLENNQLRGPIPS----------------LVGSLEFFSAYEANISG 156 (631)
Q Consensus 97 ~~l~~l~l~~n~l~g~----ip~~~~~l~~L~~L~L~~N~l~g~lP~----------------~~~~L~~L~l~~n~l~g 156 (631)
.+++.|+|++|.+... +...+...++|++|++++|.|+-.-.. ....|+.|.+++|+++-
T Consensus 93 ~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~~~~~~~~~~L~~l~l~~n~i~~ 172 (344)
T d2ca6a1 93 PKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLEN 172 (344)
T ss_dssp TTCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTG
T ss_pred CCcccccccccccccccccchhhhhcccccchheecccccccccccccccccccccccccccccCcccceeecccccccc
Confidence 4789999999988753 445566788999999999987521000 11257788888887652
Q ss_pred c----CCCCCCcCCCCCCcEEEccCCccccc-----CCCCCCCCccCcCCCCCCCEEEeecCcCccc----CChhhccCC
Q 042825 157 T----IPDFIGTDTFPQLSYLDLGNNNLQGT-----IPSSFGMPFADISNLSTLEDLSLGHNKLTGI----FPVSSFNNH 223 (631)
Q Consensus 157 ~----ip~~~~~~~l~~L~~L~Ls~N~l~g~-----iP~~~~~~~~~~~~l~~L~~L~L~~N~l~g~----iP~~~~~~l 223 (631)
. +...+. .++.|+.|+|++|+++.. +... +..+++|+.|+|++|.++.. +.. .+..+
T Consensus 173 ~~~~~l~~~l~--~~~~L~~L~L~~n~i~~~g~~~~l~~~-------l~~~~~L~~L~Ls~N~i~~~g~~~L~~-~l~~~ 242 (344)
T d2ca6a1 173 GSMKEWAKTFQ--SHRLLHTVKMVQNGIRPEGIEHLLLEG-------LAYCQELKVLDLQDNTFTHLGSSALAI-ALKSW 242 (344)
T ss_dssp GGHHHHHHHHH--HCTTCCEEECCSSCCCHHHHHHHHHTT-------GGGCTTCCEEECCSSCCHHHHHHHHHH-HGGGC
T ss_pred cccccccchhh--hhhhhcccccccccccccccccchhhh-------hcchhhhcccccccccccccccccccc-ccccc
Confidence 1 222223 457899999999988631 1111 45788899999999998632 322 36678
Q ss_pred CCCCEEEccCCCCcccCCC-C------CCCCceEEeecCCCcccC
Q 042825 224 PKLTTLNLTNNLLQGPTPR-F------NNSKLTVDMRTGSNCFCL 261 (631)
Q Consensus 224 ~~L~~L~ls~N~l~g~~p~-~------~~~~~~~~l~~~~n~~~~ 261 (631)
++|+.|+|++|.+++.-.. + ........+++++|.+..
T Consensus 243 ~~L~~L~Ls~n~i~~~g~~~l~~~l~~~~~~~L~~L~ls~N~i~~ 287 (344)
T d2ca6a1 243 PNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIEL 287 (344)
T ss_dssp TTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBH
T ss_pred ccchhhhhhcCccCchhhHHHHHHhhhccCCCCCEEECCCCcCCh
Confidence 8999999999988753110 0 111234456778887643
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.87 E-value=4.5e-07 Score=94.35 Aligned_cols=115 Identities=23% Similarity=0.344 Sum_probs=71.9
Q ss_pred CeEEEEeCCCCCccc-CcchhcCCccCceeecccCcccCCCCcCcccccccccccccceecCCCCCCcCCCCCCcEEEcc
Q 042825 98 QVTNIELQDQNRKGT-VPPILKKLSSMAVMYLENNQLRGPIPSLVGSLEFFSAYEANISGTIPDFIGTDTFPQLSYLDLG 176 (631)
Q Consensus 98 ~l~~l~l~~n~l~g~-ip~~~~~l~~L~~L~L~~N~l~g~lP~~~~~L~~L~l~~n~l~g~ip~~~~~~~l~~L~~L~Ls 176 (631)
+|+.||+++|++++. +..-+..+++|++|+|++|.++-. . + ..|+..+. .+++|++|||+
T Consensus 3 ~l~~ld~~~~~i~~~~~~~l~~~l~~l~~L~L~~~~i~~~---~---~-----------~~l~~~L~--~~~~L~~LdLs 63 (460)
T d1z7xw1 3 DIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEA---R---C-----------KDISSALR--VNPALAELNLR 63 (460)
T ss_dssp EEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHH---H---H-----------HHHHHHHH--TCTTCCEEECT
T ss_pred CCCEEEeeCCcCChHHHHHHHHhCCCCCEEEeCCCCCCHH---H---H-----------HHHHHHHh--cCCCCCEEECc
Confidence 578888888888753 344456677888888888877510 0 0 01222233 56778888888
Q ss_pred CCcccc----cCCCCCCCCccCcCCCCCCCEEEeecCcCccc----CChhhccCCCCCCEEEccCCCCcc
Q 042825 177 NNNLQG----TIPSSFGMPFADISNLSTLEDLSLGHNKLTGI----FPVSSFNNHPKLTTLNLTNNLLQG 238 (631)
Q Consensus 177 ~N~l~g----~iP~~~~~~~~~~~~l~~L~~L~L~~N~l~g~----iP~~~~~~l~~L~~L~ls~N~l~g 238 (631)
+|.++. .+...+. ....+|++|+|++|++++. ++. .+..+++|++|+|++|.++.
T Consensus 64 ~N~i~~~~~~~l~~~l~------~~~~~L~~L~L~~n~it~~~~~~l~~-~l~~~~~L~~L~L~~N~i~~ 126 (460)
T d1z7xw1 64 SNELGDVGVHCVLQGLQ------TPSCKIQKLSLQNCCLTGAGCGVLSS-TLRTLPTLQELHLSDNLLGD 126 (460)
T ss_dssp TCCCHHHHHHHHHHTTC------STTCCCCEEECTTSCCBGGGHHHHHH-HTTSCTTCCEEECCSSBCHH
T ss_pred CCcCChHHHHHHHHHHh------cCCCCCCEEECCCCCccccccccccc-hhhccccccccccccccchh
Confidence 887752 1111110 1234688888888888643 332 25677888888888887764
|
| >d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Rna1p (RanGAP1), N-terminal domain domain: Rna1p (RanGAP1), N-terminal domain species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Probab=97.86 E-value=3e-07 Score=92.85 Aligned_cols=160 Identities=15% Similarity=0.146 Sum_probs=102.2
Q ss_pred CCeEEEEeCCCCCc--c--cC---------cchhcCCccCceeecccCcccCC----CCcC---ccccccccccccccee
Q 042825 97 GQVTNIELQDQNRK--G--TV---------PPILKKLSSMAVMYLENNQLRGP----IPSL---VGSLEFFSAYEANISG 156 (631)
Q Consensus 97 ~~l~~l~l~~n~l~--g--~i---------p~~~~~l~~L~~L~L~~N~l~g~----lP~~---~~~L~~L~l~~n~l~g 156 (631)
.+++.|++++|.+. | .+ .........|+.|++++|+++-. +... ...|+.|++++|+++.
T Consensus 121 ~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~~~~~~~~~~L~~l~l~~n~i~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~ 200 (344)
T d2ca6a1 121 TPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRP 200 (344)
T ss_dssp TTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCH
T ss_pred ccchheecccccccccccccccccccccccccccccCcccceeecccccccccccccccchhhhhhhhcccccccccccc
Confidence 47899999999874 1 11 11234567899999999988632 1111 2379999999998863
Q ss_pred c-----CCCCCCcCCCCCCcEEEccCCcccccCCCCCCCCccCcCCCCCCCEEEeecCcCcccCChh---hcc--CCCCC
Q 042825 157 T-----IPDFIGTDTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVS---SFN--NHPKL 226 (631)
Q Consensus 157 ~-----ip~~~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~~~~~~~~l~~L~~L~L~~N~l~g~iP~~---~~~--~l~~L 226 (631)
. +...+. .+++|+.|+|++|.++..-...+. ..+..+++|++|+|++|.+++.-... .+. ....|
T Consensus 201 ~g~~~~l~~~l~--~~~~L~~L~Ls~N~i~~~g~~~L~---~~l~~~~~L~~L~Ls~n~i~~~g~~~l~~~l~~~~~~~L 275 (344)
T d2ca6a1 201 EGIEHLLLEGLA--YCQELKVLDLQDNTFTHLGSSALA---IALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGL 275 (344)
T ss_dssp HHHHHHHHTTGG--GCTTCCEEECCSSCCHHHHHHHHH---HHGGGCTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCC
T ss_pred cccccchhhhhc--chhhhccccccccccccccccccc---ccccccccchhhhhhcCccCchhhHHHHHHhhhccCCCC
Confidence 2 334454 678999999999998632111110 12457899999999999998531111 122 24679
Q ss_pred CEEEccCCCCccc----CCCCC--CCCceEEeecCCCcccC
Q 042825 227 TTLNLTNNLLQGP----TPRFN--NSKLTVDMRTGSNCFCL 261 (631)
Q Consensus 227 ~~L~ls~N~l~g~----~p~~~--~~~~~~~l~~~~n~~~~ 261 (631)
+.|++++|+++.. +.... .......+++++|.+..
T Consensus 276 ~~L~ls~N~i~~~~~~~l~~~l~~~~~~L~~L~l~~N~~~~ 316 (344)
T d2ca6a1 276 QTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSE 316 (344)
T ss_dssp CEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCT
T ss_pred CEEECCCCcCChHHHHHHHHHHHccCCCCCEEECCCCcCCC
Confidence 9999999998642 11110 11123345679999865
|
| >d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: mRNA export factor tap domain: mRNA export factor tap species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.83 E-value=4.6e-07 Score=81.03 Aligned_cols=68 Identities=26% Similarity=0.238 Sum_probs=32.4
Q ss_pred CCCCCcEEEccCCcccccCCCCCCCCccCcCCCCCCCEEEeecCcCcccCChhhccCCCCCCEEEccCCCCccc
Q 042825 166 TFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPVSSFNNHPKLTTLNLTNNLLQGP 239 (631)
Q Consensus 166 ~l~~L~~L~Ls~N~l~g~iP~~~~~~~~~~~~l~~L~~L~L~~N~l~g~iP~~~~~~l~~L~~L~ls~N~l~g~ 239 (631)
.+++|++|||++|+++ .++.-. ..+..+++|+.|+|++|+++ .+++-.+....+|+.|++++|.++..
T Consensus 63 ~~~~L~~L~Ls~N~i~-~l~~~~----~~~~~l~~L~~L~Ls~N~i~-~l~~l~~l~~~~L~~L~L~~Npl~~~ 130 (162)
T d1koha1 63 NIPELLSLNLSNNRLY-RLDDMS----SIVQKAPNLKILNLSGNELK-SERELDKIKGLKLEELWLDGNSLSDT 130 (162)
T ss_dssp HCTTCCCCCCCSSCCC-CCSGGG----THHHHSTTCCCCCCTTSCCC-CGGGHHHHTTCCCSSCCCTTSTTSSS
T ss_pred hCCCCCEeeCCCcccc-CCchhH----HHHhhCCcccccccccCccc-cchhhhhhhccccceeecCCCCcCcC
Confidence 3455666666666655 332110 01234555666666666665 34432222333455555555555443
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.83 E-value=3.6e-07 Score=95.15 Aligned_cols=137 Identities=14% Similarity=0.108 Sum_probs=65.3
Q ss_pred CeEEEEeCCCCCcc-----cCcchhcCCccCceeecccCcccCCCC----cC---cccccccccccccceecCCCC----
Q 042825 98 QVTNIELQDQNRKG-----TVPPILKKLSSMAVMYLENNQLRGPIP----SL---VGSLEFFSAYEANISGTIPDF---- 161 (631)
Q Consensus 98 ~l~~l~l~~n~l~g-----~ip~~~~~l~~L~~L~L~~N~l~g~lP----~~---~~~L~~L~l~~n~l~g~ip~~---- 161 (631)
.+..+++.+|.+.. .++........|+.|++++|.+..... .. ...++.+++++|.++..-...
T Consensus 227 ~~~~l~~~~n~~~~~~~~~~~~~~~~~~~~l~~l~l~~n~i~~~~~~~~~~~l~~~~~l~~l~l~~n~i~~~~~~~l~~~ 306 (460)
T d1z7xw1 227 SLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCET 306 (460)
T ss_dssp TCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHH
T ss_pred cccccchhhccccccccchhhcccccccccccccccccccccccccccccccccccccccccccccccccccccchhhcc
Confidence 55667777666532 222333445567777777776653211 11 125666666666654211100
Q ss_pred CCcCCCCCCcEEEccCCcccccCCCCCCCCccCcCCCCCCCEEEeecCcCccc----CChhhccCCCCCCEEEccCCCCc
Q 042825 162 IGTDTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGI----FPVSSFNNHPKLTTLNLTNNLLQ 237 (631)
Q Consensus 162 ~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~~~~~~~~l~~L~~L~L~~N~l~g~----iP~~~~~~l~~L~~L~ls~N~l~ 237 (631)
+. .....|+.+++++|.++..-...+. ..+....+|++|+|++|++++. ++.......+.|+.|+|++|.|+
T Consensus 307 l~-~~~~~L~~l~l~~~~l~~~~~~~l~---~~~~~~~~L~~L~Ls~N~i~~~g~~~l~~~l~~~~~~L~~L~Ls~n~i~ 382 (460)
T d1z7xw1 307 LL-EPGCQLESLWVKSCSFTAACCSHFS---SVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVS 382 (460)
T ss_dssp HT-STTCCCCEEECTTSCCBGGGHHHHH---HHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCC
T ss_pred cc-ccccccccccccccchhhhhhhhcc---cccccccchhhhheeeecccCcccchhhhhhhcccCCCCEEECCCCCCC
Confidence 00 0224566666666666532111110 0012344666666666666532 22221123455666666666665
Q ss_pred c
Q 042825 238 G 238 (631)
Q Consensus 238 g 238 (631)
.
T Consensus 383 ~ 383 (460)
T d1z7xw1 383 D 383 (460)
T ss_dssp H
T ss_pred h
Confidence 3
|
| >d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Cyclin A/CDK2-associated p19, Skp2 domain: Cyclin A/CDK2-associated p19, Skp2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.79 E-value=1.2e-06 Score=85.80 Aligned_cols=33 Identities=21% Similarity=0.227 Sum_probs=15.1
Q ss_pred cccccccccccceecCCCCCCcCCCCCCcEEEccC
Q 042825 143 SLEFFSAYEANISGTIPDFIGTDTFPQLSYLDLGN 177 (631)
Q Consensus 143 ~L~~L~l~~n~l~g~ip~~~~~~~l~~L~~L~Ls~ 177 (631)
+|++|++++++++...+..++ .+++|++|+|++
T Consensus 72 ~L~~L~L~~~~l~~~~~~~l~--~~~~L~~L~Ls~ 104 (284)
T d2astb2 72 KLQNLSLEGLRLSDPIVNTLA--KNSNLVRLNLSG 104 (284)
T ss_dssp CCSEEECTTCBCCHHHHHHHT--TCTTCSEEECTT
T ss_pred CcccccccccCCCcHHHHHHh--cCCCCcCccccc
Confidence 444444444444443333333 344455555444
|
| >d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: mRNA export factor tap domain: mRNA export factor tap species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.76 E-value=3.6e-07 Score=81.75 Aligned_cols=85 Identities=24% Similarity=0.285 Sum_probs=57.3
Q ss_pred cccccccccccccceec--CCCCCCcCCCCCCcEEEccCCcccccCCCCCCCCccCcCCCCCCCEEEeecCcCcccCCh-
Q 042825 141 VGSLEFFSAYEANISGT--IPDFIGTDTFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPV- 217 (631)
Q Consensus 141 ~~~L~~L~l~~n~l~g~--ip~~~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~~~~~~~~l~~L~~L~L~~N~l~g~iP~- 217 (631)
+.+|+.|+|++|+++.. ++..+. .+++|+.|||++|.++ .+++-. .+ ....|+.|+|++|.++.....
T Consensus 64 ~~~L~~L~Ls~N~i~~l~~~~~~~~--~l~~L~~L~Ls~N~i~-~l~~l~-----~l-~~~~L~~L~L~~Npl~~~~~~~ 134 (162)
T d1koha1 64 IPELLSLNLSNNRLYRLDDMSSIVQ--KAPNLKILNLSGNELK-SERELD-----KI-KGLKLEELWLDGNSLSDTFRDQ 134 (162)
T ss_dssp CTTCCCCCCCSSCCCCCSGGGTHHH--HSTTCCCCCCTTSCCC-CGGGHH-----HH-TTCCCSSCCCTTSTTSSSSSSH
T ss_pred CCCCCEeeCCCccccCCchhHHHHh--hCCcccccccccCccc-cchhhh-----hh-hccccceeecCCCCcCcCcccc
Confidence 34677777777776632 223344 6889999999999998 666311 12 334689999999999865542
Q ss_pred -----hhccCCCCCCEEEccCCCC
Q 042825 218 -----SSFNNHPKLTTLNLTNNLL 236 (631)
Q Consensus 218 -----~~~~~l~~L~~L~ls~N~l 236 (631)
..+..+|+|+.|| ++.+
T Consensus 135 ~~y~~~i~~~~P~L~~LD--g~~v 156 (162)
T d1koha1 135 STYISAIRERFPKLLRLD--GHEL 156 (162)
T ss_dssp HHHHHHHHTTSTTCCEET--TEEC
T ss_pred hhHHHHHHHHCCCCCEEC--cCCC
Confidence 2356789999886 4444
|
| >d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Tropomodulin C-terminal domain species: nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=96.20 E-value=0.00018 Score=63.84 Aligned_cols=116 Identities=9% Similarity=0.136 Sum_probs=60.0
Q ss_pred CCeEEEEeCCC-CCccc----CcchhcCCccCceeecccCcccCCCCcCcccccccccccccceecCCCCCCcCCCCCCc
Q 042825 97 GQVTNIELQDQ-NRKGT----VPPILKKLSSMAVMYLENNQLRGPIPSLVGSLEFFSAYEANISGTIPDFIGTDTFPQLS 171 (631)
Q Consensus 97 ~~l~~l~l~~n-~l~g~----ip~~~~~l~~L~~L~L~~N~l~g~lP~~~~~L~~L~l~~n~l~g~ip~~~~~~~l~~L~ 171 (631)
..++.|+|+++ .++.. +-..+...+.|+.|+|++|.+...-... +...+. ..+.|+
T Consensus 15 ~~L~~L~L~~~~~i~~~~~~~l~~~L~~n~~L~~L~Ls~n~l~~~~~~~-----------------la~~L~--~n~~L~ 75 (167)
T d1pgva_ 15 TDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARG-----------------LIELIE--TSPSLR 75 (167)
T ss_dssp SSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTT-----------------HHHHHH--HCSSCC
T ss_pred CCCcEEEeCCCCCCCHHHHHHHHHHHhhCCccceeeccccccchhHHHH-----------------Hhhhhh--hccccc
Confidence 36777888763 34321 3334556667777777777665210000 001111 235677
Q ss_pred EEEccCCcccccCCCCCCCCccCcCCCCCCCEEEeecCcCcccCCh-------hhccCCCCCCEEEccCCC
Q 042825 172 YLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPV-------SSFNNHPKLTTLNLTNNL 235 (631)
Q Consensus 172 ~L~Ls~N~l~g~iP~~~~~~~~~~~~l~~L~~L~L~~N~l~g~iP~-------~~~~~l~~L~~L~ls~N~ 235 (631)
.|+|++|.++..--..+. ..+...++|++|+|++|++. .+-. ..+...++|+.|+++.+.
T Consensus 76 ~L~L~~n~i~~~g~~~l~---~aL~~n~sL~~L~l~~n~~~-~~g~~~~~~l~~~L~~n~sL~~l~l~~~~ 142 (167)
T d1pgva_ 76 VLNVESNFLTPELLARLL---RSTLVTQSIVEFKADNQRQS-VLGNQVEMDMMMAIEENESLLRVGISFAS 142 (167)
T ss_dssp EEECCSSBCCHHHHHHHH---HHTTTTCCCSEEECCCCSSC-CCCHHHHHHHHHHHHHCSSCCEEECCCCC
T ss_pred ceeeehhhcchHHHHHHH---HHHHhCCcCCEEECCCCcCC-CccHHHHHHHHHHHHhCCCccEeeCcCCC
Confidence 778877777632111110 11345567777777777654 2211 113345667777765553
|
| >d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Tropomodulin C-terminal domain species: nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=94.72 E-value=0.0016 Score=57.37 Aligned_cols=69 Identities=14% Similarity=0.097 Sum_probs=42.4
Q ss_pred CCCCCcEEEccCCcccccCCCCCCCCccCcCCCCCCCEEEeecCcCcccCCh---hhccCCCCCCEEEccCCCCc
Q 042825 166 TFPQLSYLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSLGHNKLTGIFPV---SSFNNHPKLTTLNLTNNLLQ 237 (631)
Q Consensus 166 ~l~~L~~L~Ls~N~l~g~iP~~~~~~~~~~~~l~~L~~L~L~~N~l~g~iP~---~~~~~l~~L~~L~ls~N~l~ 237 (631)
..+.|+.|+|++|.+...-...+. ..+...+.|+.|+|++|.++..--. ..+...++|+.|+|++|.+.
T Consensus 42 ~n~~L~~L~Ls~n~l~~~~~~~la---~~L~~n~~L~~L~L~~n~i~~~g~~~l~~aL~~n~sL~~L~l~~n~~~ 113 (167)
T d1pgva_ 42 NSKHIEKFSLANTAISDSEARGLI---ELIETSPSLRVLNVESNFLTPELLARLLRSTLVTQSIVEFKADNQRQS 113 (167)
T ss_dssp TCSCCCEEECTTSCCBHHHHTTHH---HHHHHCSSCCEEECCSSBCCHHHHHHHHHHTTTTCCCSEEECCCCSSC
T ss_pred hCCccceeeccccccchhHHHHHh---hhhhhcccccceeeehhhcchHHHHHHHHHHHhCCcCCEEECCCCcCC
Confidence 346788888888887632222211 1134567888888888888742110 12455677888888887543
|
| >d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Tropomodulin C-terminal domain species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=93.02 E-value=0.002 Score=56.60 Aligned_cols=117 Identities=11% Similarity=0.156 Sum_probs=62.0
Q ss_pred CCeEEEEeCC-CCCcc----cCcchhcCCccCceeecccCcccCCCCcCcccccccccccccceecCCCCCCcCCCCCCc
Q 042825 97 GQVTNIELQD-QNRKG----TVPPILKKLSSMAVMYLENNQLRGPIPSLVGSLEFFSAYEANISGTIPDFIGTDTFPQLS 171 (631)
Q Consensus 97 ~~l~~l~l~~-n~l~g----~ip~~~~~l~~L~~L~L~~N~l~g~lP~~~~~L~~L~l~~n~l~g~ip~~~~~~~l~~L~ 171 (631)
..++.|+|++ +.++. .+-..+...++|+.|+|++|.++..--.. +-..+. ..+.|+
T Consensus 17 ~~L~~L~L~~~~~i~~~~~~~l~~al~~n~~L~~L~Ls~n~l~~~~~~~-----------------L~~~l~--~~~~l~ 77 (166)
T d1io0a_ 17 PDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFA-----------------LAEMLK--VNNTLK 77 (166)
T ss_dssp TTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHH-----------------HHHHHH--HCSSCC
T ss_pred CCCcEEEcCCCCCCCHHHHHHHHHHHhcCCccCeeeccCCcccHHHHHH-----------------HHHHHh--hcccch
Confidence 4677888876 34542 13345556777888888888775311000 001111 335677
Q ss_pred EEEccCCcccccCCCCCCCCccCcCCCCCCCEEEe--ecCcCcc----cCChhhccCCCCCCEEEccCCCC
Q 042825 172 YLDLGNNNLQGTIPSSFGMPFADISNLSTLEDLSL--GHNKLTG----IFPVSSFNNHPKLTTLNLTNNLL 236 (631)
Q Consensus 172 ~L~Ls~N~l~g~iP~~~~~~~~~~~~l~~L~~L~L--~~N~l~g----~iP~~~~~~l~~L~~L~ls~N~l 236 (631)
.|++++|.++..--..+. ..+...++|+.++| ++|.+.. .|-. .+...++|+.|+++.|..
T Consensus 78 ~l~l~~~~~~~~g~~~l~---~~l~~~~~L~~l~L~l~~n~i~~~~~~~La~-~L~~n~~L~~L~l~~~~~ 144 (166)
T d1io0a_ 78 SLNVESNFISGSGILALV---EALQSNTSLIELRIDNQSQPLGNNVEMEIAN-MLEKNTTLLKFGYHFTQQ 144 (166)
T ss_dssp EEECCSSCCCHHHHHHHH---HGGGGCSSCCEEECCCCSSCCCHHHHHHHHH-HHHHCSSCCEEECCCSSH
T ss_pred hhhhccccccchhHHHHH---HHHHhCccccEEeeccCCCcCcHHHHHHHHH-HHHhCCCcCEEeCcCCCC
Confidence 778877777532111110 11345667776444 4566642 1222 245667778887766543
|