Citrus Sinensis ID: 043043

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150----
Protein Sequence
MEIIEKAGSVPVVNGPKKKHFMAVVGSVLACSVLICILEIVLSFVLIWRKQKPDEFPLAMDWSLLHVHEGGGSHGGFPEGTGFPVHNVNLGLKIPYVEIKFATHNFDRKLVMGKGAFGNVYRGTLRNSMKVAVKRGETGSGQGLPEFQTAIIVL
Secondary Structure (PSIPRED)
ccccccccccccccccccccccEEEEHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHcccccccccccccccccEEEEEccccEEEEEEccccccccHHHHHHHHHcc
Secondary Structure Prediction (SSPRO)
ccEEccccccccccccccccHHHEHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccEEcHHHHHHHHccccHccEEcccccccEEEEEcccccEEEEEEccccccccHHHHHHHEEEc
Coil and Loop (DISEMBL)
meiiekagsvpvvngpkkKHFMAVVGSVLACSVLICILEIVLSFVLIWrkqkpdefplamdwsllhvhegggshggfpegtgfpvhnvnlglkipyVEIKFAthnfdrklvmgkgafgnvyrgtlrNSMKVAVKrgetgsgqglpefqTAIIVL
Flexible Loop (DISEMBL)
meiiekagsvpvvngpkKKHFMAVVGSVLACSVLICILEIVLSFVLIWRKQKPDEFPLAMDWSLLHVHEGGGSHGGFPEGTGFPVHNVNLGLKIPYVEIKFATHNFDRKLVMGKGAFGnvyrgtlrnSMKVAVKRgetgsgqglpefqtaiivl
Low Complexity Region (SEG)
MEIIEKAGSVPVVNGPKKKHFMAVVGSVLACSVLICILEIVLSFVLIWRKQKPDEFPLAMDWSLLHVHEgggshggfpegtgFPVHNVNLGLKIPYVEIKFATHNFDRKLVMGKGAFGNVYRGTLRNSMKVAVKRGETGSGQGLPEFQTAIIVL
Disordered region (IsUnstruct)
****************KKKHFMAVVGSVLACSVLICILEIVLSFVLIWRKQKPDEFPLAMDWSLLHVHEGGGSHGGFPEGTGFPVHNVNLGLKIPYVEIKFATHNFDRKLVMGKGAFGNVYRGTLRNSMKVA**********************
Disordered Region (DISOPRED)
*************************GSVLACSVLICILEIVLSFVLI********************************************LKIPYVEIKFATHNFDRKLVMGKGAFGNVYRGTLRNSMKVAV*R************QTAIIVL
Disordered Region (DISEMBL)
MEIIEKAGSVPVVNGPKKKHFMAVVGSVLACSVLICILEIVLSFVLIWRKQKPDEFPLAMDWSLLHVHEGGGSHGGFPEGTGFPVHNVNLGLKIPYVEIKFATHNFDRKLVMGKGAFGNVYRGTLRNSMKVAVKRGETGSGQGLPEFQTAIIVL
Disordered Region (DISPRO)
********SV********KHFMAVVGSVLACSVLICILEIVLSFVLIWRKQK************************************NLGLKIPYVEIKFATHNFDRKLVMGKGAFGNVYRGTLRNSMKVAVKRGETGSGQGLPEFQTAIIVL
Transmembrane Helix (TMHMM)
oooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MEIIEKAGSVPVVNGPKKKHFMAVVGSVLACSVLICILEIVLSFVLIWRKQKPDEFPLAMDWSLLHVHEGGGSHGGFPEGTGFPVHNVNLGLKIPYVEIKFATHNFDRKLVMGKGAFGNVYRGTLRNSMKVAVKRGETGSGQGLPEFQTAIIVL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	154	2.2.26 [Sep-21-2011]
O22187	834	Probable receptor-like pr	yes	no	1.0	0.184	0.367	6e-20
Q9FLW0	824	Probable receptor-like pr	no	no	0.915	0.171	0.363	3e-15
Q9LX66	830	Receptor-like protein kin	no	no	0.818	0.151	0.363	8e-13
O80623	815	Probable receptor-like pr	no	no	0.571	0.107	0.433	9e-12
Q9FLJ8	842	Probable receptor-like pr	no	no	0.909	0.166	0.312	2e-11
Q9T020	878	Probable receptor-like pr	no	no	0.714	0.125	0.389	2e-11
Q9SA72	849	Probable receptor-like pr	no	no	0.922	0.167	0.315	4e-11
Q9SCZ4	895	Receptor-like protein kin	no	no	0.766	0.131	0.351	4e-10
Q9LK35	855	Receptor-like protein kin	no	no	0.785	0.141	0.284	4e-10
Q9FN92	829	Probable receptor-like pr	no	no	0.428	0.079	0.484	6e-10

>sp|O22187|Y2232_ARATH Probable receptor-like protein kinase At2g23200 OS=Arabidopsis thaliana GN=At2g23200 PE=3 SV=1

 Score = 96.3 bits (238), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 57/155 (36%), Positives = 84/155 (54%), Gaps = 1/155 (0%)

Query: 1   MEIIEKAGSVPVVNGPKKKHFMAVVGSVLACSVLICILEIVLSFVLIWRKQKPDEFPLAM 60
           ME++ K+GS        + H +       A +  +    + + F+   R +K        
Sbjct: 382 MEVLSKSGSDYSNRSSSRVHIITGCAVAAAAASALVFSLLFMVFLKRRRSKKTKPEVEGT 441

Query: 61  DWSLLHVHEGGGSHG-GFPEGTGFPVHNVNLGLKIPYVEIKFATHNFDRKLVMGKGAFGN 119
            WS L +H GG S      +    P+ N++LGL IP+ +I  AT+NFD +L++GKG FG 
Sbjct: 442 VWSPLPLHRGGSSDNRPISQYHNSPLRNLHLGLTIPFTDILSATNNFDEQLLIGKGGFGY 501

Query: 120 VYRGTLRNSMKVAVKRGETGSGQGLPEFQTAIIVL 154
           VY+  L +  K A+KRG+TGSGQG+ EFQT I VL
Sbjct: 502 VYKAILPDGTKAAIKRGKTGSGQGILEFQTEIQVL 536

Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: -

>sp|Q9FLW0|Y5241_ARATH Probable receptor-like protein kinase At5g24010 OS=Arabidopsis thaliana GN=At5g24010 PE=1 SV=1

 Score = 80.9 bits (198), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 53/146 (36%), Positives = 77/146 (52%), Gaps = 5/146 (3%)

Query: 9   SVPVVNGPKKKHFMAVVGSVLACSVLICILEIVLSFVLIWRKQKPDEFPLAMDWSLLHVH 68
           S  VV+G K+     VVGSVL   V + +  + +   L  RK        +  W+ L   
Sbjct: 397 SSEVVSG-KRNVVWIVVGSVLGGFVFLSLFFLSV-LCLCRRKNNKTRSSESTGWTPLRRF 454

Query: 69  EGGGSHGGFPEGTGFPVHNVNLGLKIPYVEIKFATHNFDRKLVMGKGAFGNVYRGTLRNS 128
            G  +            ++    L+I + E++  T+NFDR LV+G G FG V+RG+L+++
Sbjct: 455 RGSSNSRTTERTVSSSGYHT---LRISFAELQSGTNNFDRSLVIGVGGFGMVFRGSLKDN 511

Query: 129 MKVAVKRGETGSGQGLPEFQTAIIVL 154
            KVAVKRG  GS QGLPEF + I +L
Sbjct: 512 TKVAVKRGSPGSRQGLPEFLSEITIL 537

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

>sp|Q9LX66|HERK_ARATH Receptor-like protein kinase HERK 1 OS=Arabidopsis thaliana GN=HERK1 PE=1 SV=1

 Score = 72.8 bits (177), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 48/132 (36%), Positives = 71/132 (53%), Gaps = 6/132 (4%)

Query: 24  VVGSVLACSVLICILEIVLSFVLIWRKQKPDEFPLAMDWSLLHVHEGGGSHGG-FPEGTG 82
           +VGS +    L+ ++ +   FVL ++K+K  +   +  W    ++  G S G  +  GT 
Sbjct: 407 IVGSAIGS--LLAVVFLGSCFVL-YKKRKRGQDGHSKTWMPFSIN--GTSMGSKYSNGTT 461

Query: 83  FPVHNVNLGLKIPYVEIKFATHNFDRKLVMGKGAFGNVYRGTLRNSMKVAVKRGETGSGQ 142
                 N   +IP+  +K AT+NFD    +G G FG VY+G L +  KVAVKRG   S Q
Sbjct: 462 LTSITTNANYRIPFAAVKDATNNFDESRNIGVGGFGKVYKGELNDGTKVAVKRGNPKSQQ 521

Query: 143 GLPEFQTAIIVL 154
           GL EF+T I +L
Sbjct: 522 GLAEFRTEIEML 533

Receptor-like protein kinase required for cell elongation during vegetative growth, mostly in a brassinosteroid-(BR-) independent manner.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

>sp|O80623|Y2393_ARATH Probable receptor-like protein kinase At2g39360 OS=Arabidopsis thaliana GN=At2g39360 PE=1 SV=1

 Score = 69.3 bits (168), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 39/90 (43%), Positives = 51/90 (56%), Gaps = 2/90 (2%)

Query: 67  VHEGGGSHGGFPEGTGFPV--HNVNLGLKIPYVEIKFATHNFDRKLVMGKGAFGNVYRGT 124
           VH  G  H      TG  +   +  +G + P   IK AT +FD  LV+G G FG VY+G 
Sbjct: 446 VHSRGDDHQIKKNETGESLIFSSSKIGYRYPLALIKEATDDFDESLVIGVGGFGKVYKGV 505

Query: 125 LRNSMKVAVKRGETGSGQGLPEFQTAIIVL 154
           LR+  +VAVKRG   S QGL EF+T + +L
Sbjct: 506 LRDKTEVAVKRGAPQSRQGLAEFKTEVEML 535

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

>sp|Q9FLJ8|Y5613_ARATH Probable receptor-like protein kinase At5g61350 OS=Arabidopsis thaliana GN=At5g61350 PE=2 SV=1

 Score = 68.2 bits (165), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 51/163 (31%), Positives = 74/163 (45%), Gaps = 23/163 (14%)

Query: 11  PVVNGPKKKHFMAVVGSVLACSVLICILEIVLSFVLIWRK-----QKPDEF-----PLAM 60
           P+     KK  +A +G V+A +  + ++ +++     W++     QK + F     PL  
Sbjct: 415 PIGGMSSKKLAIAGIGFVMALTAFLGVVVLLVR----WQRRPKDWQKQNSFSSWLLPLHA 470

Query: 61  DWSLLHVHEGG---------GSHGGFPEGTGFPVHNVNLGLKIPYVEIKFATHNFDRKLV 111
             S     +GG         GS      G      N  LG   P+ E++ AT NFD   V
Sbjct: 471 SHSSYISSKGGSTSRRMSIFGSKKSKSNGFSSFFSNQGLGRYFPFTELQTATQNFDENAV 530

Query: 112 MGKGAFGNVYRGTLRNSMKVAVKRGETGSGQGLPEFQTAIIVL 154
            G G FG VY G +    +VA+KRG   S QG+ EFQT I +L
Sbjct: 531 CGVGGFGKVYIGEIDGGTQVAIKRGSQSSEQGINEFQTEIQML 573

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

>sp|Q9T020|Y4391_ARATH Probable receptor-like protein kinase At4g39110 OS=Arabidopsis thaliana GN=At4g39110 PE=1 SV=1

 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 46/118 (38%), Positives = 64/118 (54%), Gaps = 8/118 (6%)

Query: 43  SFVLIWRKQKPDEFPLAMDWS--LLHVHEGGG----SHGGFPEGTGFPVHNVNLGLKIPY 96
           + V  W+K +P ++     +S  LL +H G      S GG  + + F    + LG     
Sbjct: 459 AMVYKWKK-RPQDWQKRNSFSSWLLPIHAGDSTFMTSKGG-SQKSNFYNSTLGLGRYFSL 516

Query: 97  VEIKFATHNFDRKLVMGKGAFGNVYRGTLRNSMKVAVKRGETGSGQGLPEFQTAIIVL 154
            E++ AT NF+   ++G G FGNVY GTL +  KVAVKRG   S QG+ EFQT I +L
Sbjct: 517 SELQEATKNFEASQIIGVGGFGNVYIGTLDDGTKVAVKRGNPQSEQGITEFQTEIQML 574

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

>sp|Q9SA72|Y1357_ARATH Probable receptor-like protein kinase At1g30570 OS=Arabidopsis thaliana GN=At1g30570 PE=1 SV=1

 Score = 67.0 bits (162), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 46/146 (31%), Positives = 69/146 (47%), Gaps = 4/146 (2%)

Query: 13  VNGPKKKHFMAVVGSVLACSVLICILEIVLSFVLIWRKQKPDEFPLAM-DWSLLHVHEGG 71
           V+  K +     VG+ +A  +    L I++  +   R+ K DE       W  L +H   
Sbjct: 423 VSDSKMRIIWISVGAGIAIIIFFVFLGILVVCLCKKRRSKSDESKNNPPGWRPLFLHVNN 482

Query: 72  GSHGGFPEGTGFPVHNV---NLGLKIPYVEIKFATHNFDRKLVMGKGAFGNVYRGTLRNS 128
            +      G    ++ +    +G K    EI+ AT NFD  L +G G FG VYRG L + 
Sbjct: 483 STANAKATGGSLRLNTLAASTMGRKFTLAEIRAATKNFDDGLAIGVGGFGKVYRGELEDG 542

Query: 129 MKVAVKRGETGSGQGLPEFQTAIIVL 154
             +A+KR    S QGL EF+T I++L
Sbjct: 543 TLIAIKRATPHSQQGLAEFETEIVML 568

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

>sp|Q9SCZ4|FERON_ARATH Receptor-like protein kinase FERONIA OS=Arabidopsis thaliana GN=FER PE=1 SV=1

 Score = 63.9 bits (154), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 45/128 (35%), Positives = 65/128 (50%), Gaps = 10/128 (7%)

Query: 37  ILEIVLSFVLI--WRKQKPDEFPLAMD----WSLLHVHEGGGSHGGFPEGTGFPVHNV-- 88
           +L +++ F +   +R++K  ++  A D    W  L ++    S G     T     +   
Sbjct: 458 VLALIIGFCVFGAYRRRKRGDYQPASDATSGWLPLSLYGNSHSAGSAKTNTTGSYASSLP 517

Query: 89  -NLGLKIPYVEIKFATHNFDRKLVMGKGAFGNVYRGTLR-NSMKVAVKRGETGSGQGLPE 146
            NL     + EIK AT NFD   V+G G FG VYRG +   + KVA+KRG   S QG+ E
Sbjct: 518 SNLCRHFSFAEIKAATKNFDESRVLGVGGFGKVYRGEIDGGTTKVAIKRGNPMSEQGVHE 577

Query: 147 FQTAIIVL 154
           FQT I +L
Sbjct: 578 FQTEIEML 585

Receptor-like protein kinase that mediates the female control of male gamete delivery during fertilization, including growth cessation of compatible pollen tubes ensuring a reproductive isolation barriers. Required for cell elongation during vegetative growth, mostly in a brassinosteroids- (BR-) independent manner.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9LK35|THE1_ARATH Receptor-like protein kinase THESEUS 1 OS=Arabidopsis thaliana GN=THE1 PE=1 SV=1

 Score = 63.9 bits (154), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 43/151 (28%), Positives = 67/151 (44%), Gaps = 30/151 (19%)

Query: 24  VVGSVLACSVLICILEIVLSFVLIWRKQKPDEFPLAMDWSLLHVHEGGGSHGGFP----- 78
           ++GS++    LI ++ +     L+  +++    P           EGG  H   P     
Sbjct: 418 IIGSLVGAVTLILLIAVCCYCCLVASRKQRSTSP----------QEGGNGHPWLPLPLYG 467

Query: 79  ---------------EGTGFPVHNVNLGLKIPYVEIKFATHNFDRKLVMGKGAFGNVYRG 123
                            +   + + +LG    + EI  AT+ FD   ++G G FG VY+G
Sbjct: 468 LSQTLTKSTASHKSATASCISLASTHLGRCFMFQEIMDATNKFDESSLLGVGGFGRVYKG 527

Query: 124 TLRNSMKVAVKRGETGSGQGLPEFQTAIIVL 154
           TL +  KVAVKRG   S QG+ EF+T I +L
Sbjct: 528 TLEDGTKVAVKRGNPRSEQGMAEFRTEIEML 558

Receptor-like protein kinase required for cell elongation during vegetative growth, mostly in a brassinosteroid-(BR-) independent manner. Mediates the response of growing plant cells to the perturbation of cellulose synthesis and may act as a cell-wall-integrity sensor. Controls ectopic-lignin accumulation in cellulose-deficient mutant backgrounds.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

>sp|Q9FN92|Y5597_ARATH Probable receptor-like protein kinase At5g59700 OS=Arabidopsis thaliana GN=At5g59700 PE=1 SV=1

 Score = 63.2 bits (152), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 32/66 (48%), Positives = 41/66 (62%)

Query: 89  NLGLKIPYVEIKFATHNFDRKLVMGKGAFGNVYRGTLRNSMKVAVKRGETGSGQGLPEFQ 148
           N   +IP V +K AT++FD    +G G FG VY+G L +  KVAVKR    S QGL EF+
Sbjct: 465 NSSYRIPLVAVKEATNSFDENRAIGVGGFGKVYKGELHDGTKVAVKRANPKSQQGLAEFR 524

Query: 149 TAIIVL 154
           T I +L
Sbjct: 525 TEIEML 530

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	154
225438853	842	PREDICTED: probable receptor-like protei	0.980	0.179	0.506	5e-29
147801769	842	hypothetical protein VITISV_030033 [Viti	0.980	0.179	0.5	6e-29
296087389	839	unnamed protein product [Vitis vinifera]	0.980	0.179	0.519	2e-28
147834523	839	hypothetical protein VITISV_000519 [Viti	0.980	0.179	0.519	2e-28
359480653	826	PREDICTED: probable receptor-like protei	0.980	0.182	0.519	2e-28
356514284	816	PREDICTED: probable receptor-like protei	0.928	0.175	0.460	3e-28
255567913	807	Nodulation receptor kinase precursor, pu	0.980	0.187	0.474	4e-27
359497624	497	PREDICTED: receptor-like protein kinase	0.980	0.303	0.512	2e-26
351724465	691	protein kinase family protein [Glycine m	0.980	0.218	0.459	5e-26
225438863	835	PREDICTED: probable receptor-like protei	0.935	0.172	0.475	1e-25

>gi|225438853|ref|XP_002278695.1| PREDICTED: probable receptor-like protein kinase At5g24010 [Vitis vinifera] gi|296087388|emb|CBI33762.3| unnamed protein product [Vitis vinifera]

 Score =  132 bits (332), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 79/156 (50%), Positives = 101/156 (64%), Gaps = 5/156 (3%)

Query: 1   MEIIEKAGSVPVVNGPKKKHFMAVVGSVLACSVLICILEIVLSFVLIWRKQKPDEFPLAM 60
           MEI+++ G V + N  KKK+   +VGSV+    L+C++ +VL      RK KP +   A 
Sbjct: 397 MEIMQELGWVSIENESKKKYIPLLVGSVVGGLALVCLVVVVLLLQSKCRKGKPTQ---AT 453

Query: 61  DWSLLHVHEGGGSHGGFPEGTGF--PVHNVNLGLKIPYVEIKFATHNFDRKLVMGKGAFG 118
           DW  + V  G  SHG   E T    PV  +NLGLKIP+ E++ AT NF  KL++GKG FG
Sbjct: 454 DWLPITVDRGLSSHGRLHEATNHSSPVPYLNLGLKIPFAEVRSATKNFSSKLLVGKGGFG 513

Query: 119 NVYRGTLRNSMKVAVKRGETGSGQGLPEFQTAIIVL 154
            VY+GTLRN MKVAVKR + G GQGLPEFQT I+VL
Sbjct: 514 KVYQGTLRNGMKVAVKRSQPGHGQGLPEFQTEILVL 549

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147801769|emb|CAN74534.1| hypothetical protein VITISV_030033 [Vitis vinifera]

 Score =  132 bits (331), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 78/156 (50%), Positives = 99/156 (63%), Gaps = 5/156 (3%)

Query: 1   MEIIEKAGSVPVVNGPKKKHFMAVVGSVLACSVLICILEIVLSFVLIWRKQKPDEFPLAM 60
           MEI+++ G V + N  KKK+   +VGSV+    L+C++ +V       RK KP +   A 
Sbjct: 397 MEIMQELGWVSIENESKKKYIPLLVGSVVGGLALVCLVVVVXLLQSKCRKXKPXQ---AT 453

Query: 61  DWSLLHVHEGGGSHGGFPEGTGF--PVHNVNLGLKIPYVEIKFATHNFDRKLVMGKGAFG 118
           DW  + V  G  SHG   E T    PV  +NLGLKIP+ E+  AT NF  KL++GKG FG
Sbjct: 454 DWLPITVDRGLSSHGRLHEATNHSSPVPYLNLGLKIPFAEVXSATKNFSSKLLVGKGGFG 513

Query: 119 NVYRGTLRNSMKVAVKRGETGSGQGLPEFQTAIIVL 154
            VY+GTLRN MKVAVKR + G GQGLPEFQT I+VL
Sbjct: 514 KVYQGTLRNGMKVAVKRSQPGHGQGLPEFQTEILVL 549

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296087389|emb|CBI33763.3| unnamed protein product [Vitis vinifera]

 Score =  130 bits (326), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 81/156 (51%), Positives = 100/156 (64%), Gaps = 5/156 (3%)

Query: 1   MEIIEKAGSVPVVNGPKKKHFMAVVGSVLACSVLICILEIVLSFVLIWRKQKPDEFPLAM 60
           MEI+E+ G V + N  KKK    +VG V+    L+CI+ +VL      RK+KP E   A 
Sbjct: 394 MEIMEELGWVSMENESKKKTTPLLVGLVVGGLALVCIVIVVLLLRSKCRKEKPAE---AS 450

Query: 61  DWSLLHVHEGGGSHGGFPEGT--GFPVHNVNLGLKIPYVEIKFATHNFDRKLVMGKGAFG 118
            W  + V  G  SH    E T  G PV ++NLGLKIP  EI+ AT+NF  KL++GKG FG
Sbjct: 451 HWLPVTVDGGLSSHSRVYEATIHGSPVPHLNLGLKIPLAEIQSATNNFSSKLLVGKGGFG 510

Query: 119 NVYRGTLRNSMKVAVKRGETGSGQGLPEFQTAIIVL 154
            VY+GTLRN MKVAVKR + G GQGLPEFQT I+VL
Sbjct: 511 KVYQGTLRNGMKVAVKRSQPGHGQGLPEFQTEILVL 546

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147834523|emb|CAN60912.1| hypothetical protein VITISV_000519 [Vitis vinifera]

 Score =  130 bits (326), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 81/156 (51%), Positives = 100/156 (64%), Gaps = 5/156 (3%)

Query: 1   MEIIEKAGSVPVVNGPKKKHFMAVVGSVLACSVLICILEIVLSFVLIWRKQKPDEFPLAM 60
           MEI+E+ G V + N  KKK    +VG V+    L+CI+ +VL      RK+KP E   A 
Sbjct: 394 MEIMEELGWVSMENESKKKTTPLLVGLVVGGLALVCIVIVVLLLRSKCRKEKPAE---AS 450

Query: 61  DWSLLHVHEGGGSHGGFPEGT--GFPVHNVNLGLKIPYVEIKFATHNFDRKLVMGKGAFG 118
            W  + V  G  SH    E T  G PV ++NLGLKIP  EI+ AT+NF  KL++GKG FG
Sbjct: 451 HWLPVTVDGGLSSHSRVYEATIHGSPVPHLNLGLKIPLAEIQSATNNFSSKLLVGKGGFG 510

Query: 119 NVYRGTLRNSMKVAVKRGETGSGQGLPEFQTAIIVL 154
            VY+GTLRN MKVAVKR + G GQGLPEFQT I+VL
Sbjct: 511 KVYQGTLRNGMKVAVKRSQPGHGQGLPEFQTEILVL 546

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359480653|ref|XP_003632509.1| PREDICTED: probable receptor-like protein kinase At2g23200-like [Vitis vinifera]

 Score =  130 bits (326), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 81/156 (51%), Positives = 100/156 (64%), Gaps = 5/156 (3%)

Query: 1   MEIIEKAGSVPVVNGPKKKHFMAVVGSVLACSVLICILEIVLSFVLIWRKQKPDEFPLAM 60
           MEI+E+ G V + N  KKK    +VG V+    L+CI+ +VL      RK+KP E   A 
Sbjct: 381 MEIMEELGWVSMENESKKKTTPLLVGLVVGGLALVCIVIVVLLLRSKCRKEKPAE---AS 437

Query: 61  DWSLLHVHEGGGSHGGFPEGT--GFPVHNVNLGLKIPYVEIKFATHNFDRKLVMGKGAFG 118
            W  + V  G  SH    E T  G PV ++NLGLKIP  EI+ AT+NF  KL++GKG FG
Sbjct: 438 HWLPVTVDGGLSSHSRVYEATIHGSPVPHLNLGLKIPLAEIQSATNNFSSKLLVGKGGFG 497

Query: 119 NVYRGTLRNSMKVAVKRGETGSGQGLPEFQTAIIVL 154
            VY+GTLRN MKVAVKR + G GQGLPEFQT I+VL
Sbjct: 498 KVYQGTLRNGMKVAVKRSQPGHGQGLPEFQTEILVL 533

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356514284|ref|XP_003525836.1| PREDICTED: probable receptor-like protein kinase At2g23200-like [Glycine max]

 Score =  129 bits (325), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 75/163 (46%), Positives = 102/163 (62%), Gaps = 20/163 (12%)

Query: 1   MEIIEKAGSVP-VVNGPKKKH--FMAVVGSVLACSVLICILEIVLSFVLIWR----KQKP 53
           M+IIE++ SVP  ++ P  +H     V+GSVL       I  ++L F  +WR    K+KP
Sbjct: 375 MKIIERSSSVPPYLDEPNSEHNRLPVVLGSVL------IIFMMILGF--LWRLKITKEKP 426

Query: 54  DEFPLAMDWSLLHVHEGGGSHGGFPEGT--GFPVHNVNLGLKIPYVEIKFATHNFDRKLV 111
            E     DW  + V  GG S     EGT  G  + N+NLGLKIP ++++ AT+NF    +
Sbjct: 427 TE---NSDWLPMLVTAGGSSQSRLTEGTSQGSALPNINLGLKIPLLDLQLATNNFHASQI 483

Query: 112 MGKGAFGNVYRGTLRNSMKVAVKRGETGSGQGLPEFQTAIIVL 154
           +GKG+FGNVY+G L+N M VAVKRGE GSG+GLPEF T I++L
Sbjct: 484 IGKGSFGNVYKGVLQNGMTVAVKRGEPGSGEGLPEFHTEIVIL 526

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255567913|ref|XP_002524934.1| Nodulation receptor kinase precursor, putative [Ricinus communis] gi|223535769|gb|EEF37431.1| Nodulation receptor kinase precursor, putative [Ricinus communis]

 Score =  125 bits (315), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 74/156 (47%), Positives = 95/156 (60%), Gaps = 5/156 (3%)

Query: 1   MEIIEKAGSVPVVNGPKKKHFMAVVGSVLACSVLICILEIVLSFVLIWRKQKPDEFPLAM 60
           ME++ ++G V   +G KK     VVGSVL    L CIL++ +   L  RK K  E    +
Sbjct: 362 MEMVGESGLVLTTHGDKKIPISVVVGSVLGGLALTCILKVAIFLCLRRRKSKTVE---NL 418

Query: 61  DWSLLHVHEGGGSHGGFP-EGTGFP-VHNVNLGLKIPYVEIKFATHNFDRKLVMGKGAFG 118
           + S   ++  G SH     +GT    V   NLGLKI   EI  AT+NFD K+++GKG FG
Sbjct: 419 ERSTAPIYRAGSSHNRMMLQGTVVSRVPGSNLGLKISLAEILLATNNFDPKMIVGKGGFG 478

Query: 119 NVYRGTLRNSMKVAVKRGETGSGQGLPEFQTAIIVL 154
           +VYRG LRN +KVA+KR E  SGQGLPEFQT I+VL
Sbjct: 479 HVYRGNLRNGIKVAIKRSEPASGQGLPEFQTEIMVL 514

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359497624|ref|XP_003635588.1| PREDICTED: receptor-like protein kinase THESEUS 1-like, partial [Vitis vinifera]

 Score =  124 bits (310), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 80/156 (51%), Positives = 99/156 (63%), Gaps = 5/156 (3%)

Query: 1   MEIIEKAGSVPVVNGPKKKHFMAVVGSVLACSVLICILEIVLSFVLIWRKQKPDEFPLAM 60
           MEI+E+ G V + N  KKK    +VG V+    L+CI+ +VL      RK+KP E   A 
Sbjct: 52  MEIMEELGWVSMENESKKKTTPLLVGLVVGGLALVCIVIVVLLLRSKCRKEKPAE---AS 108

Query: 61  DWSLLHVHEGGGSHGGFPEGT--GFPVHNVNLGLKIPYVEIKFATHNFDRKLVMGKGAFG 118
            W  + V  G  SH    E T  G PV  +NLGLK+P  EI+ AT+NF  KL++GKG FG
Sbjct: 109 HWLPVTVDGGLSSHSRVYEATIHGSPVPYLNLGLKMPLAEIQSATNNFSSKLLVGKGGFG 168

Query: 119 NVYRGTLRNSMKVAVKRGETGSGQGLPEFQTAIIVL 154
            VY+GTLRN MKVAVKR + G GQGLPEFQT I+VL
Sbjct: 169 KVYQGTLRNGMKVAVKRSQPGHGQGLPEFQTEILVL 204

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351724465|ref|NP_001235011.1| protein kinase family protein [Glycine max] gi|223452391|gb|ACM89523.1| protein kinase family protein [Glycine max]

 Score =  122 bits (306), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 73/159 (45%), Positives = 99/159 (62%), Gaps = 8/159 (5%)

Query: 1   MEIIEKAGSVPVVNGPKKKH--FMAVVGSVLACSVLICILEIVLSFVLIWRKQKPDEFPL 58
           M++IE + SVP+  G    H     V+GSV+   VL   + +V+    +WR +   E P+
Sbjct: 241 MKVIETSSSVPLDLGSGSSHNSLPVVLGSVVGGLVL---VFVVVILGFLWRFKMRKEKPV 297

Query: 59  A-MDWSLLHVHEGGGSHGGFPEGT--GFPVHNVNLGLKIPYVEIKFATHNFDRKLVMGKG 115
              DW  + +  GG SH    +GT  G P+ N+NLGLKIP ++++ AT NF    ++GKG
Sbjct: 298 ENSDWLPIPITAGGSSHSRLTDGTSHGSPLPNINLGLKIPLIDLQLATKNFHASQLIGKG 357

Query: 116 AFGNVYRGTLRNSMKVAVKRGETGSGQGLPEFQTAIIVL 154
            FGNVY+G LRN M VAVKR + GSGQGLPEFQT I+VL
Sbjct: 358 GFGNVYKGILRNGMIVAVKRSQPGSGQGLPEFQTEIMVL 396

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225438863|ref|XP_002278764.1| PREDICTED: probable receptor-like protein kinase At2g23200-like [Vitis vinifera]

 Score =  121 bits (303), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 76/160 (47%), Positives = 97/160 (60%), Gaps = 16/160 (10%)

Query: 1   MEIIEK-AGSVPVVNGPKKKHFMAVVGSVLACSVLICILEIVLSFVLIWRKQKPDEFPLA 59
           ME+I K +GS+P  + PKK     VV  +  C V +  L I+L  +L  RK    E   +
Sbjct: 386 MELITKESGSLPAPSKPKK----TVVFVMAGCVVGVAFLLILLGVILKCRKANSVE---S 438

Query: 60  MDWSLLHVHEGGGSHGGFPEGTGFPVH-----NVNLGLKIPYVEIKFATHNFDRKLVMGK 114
            +WS+L     GG +  +  GTG  V      ++NLGLKIP+ EI  ATH FD+K ++GK
Sbjct: 439 GEWSMLLY---GGRYFSWITGTGRAVETSSVSSLNLGLKIPFSEILHATHRFDKKSMIGK 495

Query: 115 GAFGNVYRGTLRNSMKVAVKRGETGSGQGLPEFQTAIIVL 154
           G FG VYRGTLR+  KVAVKR + G GQGL EFQT IIVL
Sbjct: 496 GGFGKVYRGTLRDGKKVAVKRSQPGRGQGLYEFQTEIIVL 535

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	154
TAIR|locus:2058636	834	AT2G23200 [Arabidopsis thalian	0.987	0.182	0.356	1.4e-18
TAIR|locus:2178707	824	AT5G24010 [Arabidopsis thalian	0.961	0.179	0.350	1.3e-14
TAIR|locus:2075346	830	HERK1 "hercules receptor kinas	0.915	0.169	0.317	1.1e-12
TAIR|locus:2151349	855	THE1 "THESEUS1" [Arabidopsis t	0.935	0.168	0.314	1e-11
TAIR|locus:2123056	656	CRK32 "cysteine-rich RLK (RECE	0.409	0.096	0.412	1.8e-11
UNIPROTKB|Q40234	321	Pto "Pto disease resistance pr	0.402	0.193	0.483	3.3e-11
TAIR|locus:2204564	849	HERK2 "hercules receptor kinas	0.922	0.167	0.308	3.5e-11
TAIR|locus:2039717	815	AT2G39360 [Arabidopsis thalian	0.811	0.153	0.323	1.5e-10
TAIR|locus:2174249	829	AT5G59700 [Arabidopsis thalian	0.818	0.151	0.312	2.5e-10
TAIR|locus:2123126	666	CRK31 "cysteine-rich RLK (RECE	0.409	0.094	0.412	2.5e-10

TAIR|locus:2058636 AT2G23200 [Arabidopsis thaliana (taxid:3702)]

 Score = 235 (87.8 bits), Expect = 1.4e-18, P = 1.4e-18
 Identities = 56/157 (35%), Positives = 84/157 (53%)

Query:     1 MEIIEKAGSVPVVNGPKKKHFMAVVGSVLACSVLICILEIVLSFVLIWRKQKPDEFPLAM 60
             ME++ K+GS        + H   + G  +A +    ++  +L  V + R++     P   
Sbjct:   382 MEVLSKSGSDYSNRSSSRVHI--ITGCAVAAAAASALVFSLLFMVFLKRRRSKKTKPEVE 439

Query:    61 D--WSLLHVHEXXXXXXX-XXXXXXFPVHNVNLGLKIPYVEIKFATHNFDRKLVMGKGAF 117
                WS L +H                P+ N++LGL IP+ +I  AT+NFD +L++GKG F
Sbjct:   440 GTVWSPLPLHRGGSSDNRPISQYHNSPLRNLHLGLTIPFTDILSATNNFDEQLLIGKGGF 499

Query:   118 GNVYRGTLRNSMKVAVKRGETGSGQGLPEFQTAIIVL 154
             G VY+  L +  K A+KRG+TGSGQG+ EFQT I VL
Sbjct:   500 GYVYKAILPDGTKAAIKRGKTGSGQGILEFQTEIQVL 536

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005576 "extracellular region" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0051510 "regulation of unidimensional cell growth" evidence=RCA

TAIR|locus:2178707 AT5G24010 [Arabidopsis thaliana (taxid:3702)]

 Score = 198 (74.8 bits), Expect = 1.3e-14, P = 1.3e-14
 Identities = 54/154 (35%), Positives = 78/154 (50%)

Query:     1 MEIIEKAGSVPVVNGPKKKHFMAVVGSVLACSVLICILEIVLSFVLIWRKQKPDEFPLAM 60
             M I+    S  VV+G K+     VVGSVL   V + +  + +   L  RK        + 
Sbjct:   390 MRILSPVSS-EVVSG-KRNVVWIVVGSVLGGFVFLSLFFLSV-LCLCRRKNNKTRSSEST 446

Query:    61 DWSLLHVHEXXXXXXXXXXXXXFPVHNVNLGLKIPYVEIKFATHNFDRKLVMGKGAFGNV 120
              W+ L                    ++    L+I + E++  T+NFDR LV+G G FG V
Sbjct:   447 GWTPLRRFRGSSNSRTTERTVSSSGYHT---LRISFAELQSGTNNFDRSLVIGVGGFGMV 503

Query:   121 YRGTLRNSMKVAVKRGETGSGQGLPEFQTAIIVL 154
             +RG+L+++ KVAVKRG  GS QGLPEF + I +L
Sbjct:   504 FRGSLKDNTKVAVKRGSPGSRQGLPEFLSEITIL 537

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0009506 "plasmodesma" evidence=IDA

GO:0051510 "regulation of unidimensional cell growth" evidence=RCA

TAIR|locus:2075346 HERK1 "hercules receptor kinase 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 180 (68.4 bits), Expect = 1.1e-12, P = 1.1e-12
 Identities = 46/145 (31%), Positives = 71/145 (48%)

Query:    10 VPVVNGPKKKHFMAVVGSVLACSVLICILEIVLSFVLIWRKQKPDEFPLAMDWSLLHVHE 69
             VP  +   K +   +VGS +    L+ ++ +   FVL ++K+K  +   +  W    ++ 
Sbjct:   393 VPGSSSSSKSNLGLIVGSAIGS--LLAVVFLGSCFVL-YKKRKRGQDGHSKTWMPFSING 449

Query:    70 XXXXXXXXXXXXXFPVHNVNLGLKIPYVEIKFATHNFDRKLVMGKGAFGNVYRGTLRNSM 129
                            +   N   +IP+  +K AT+NFD    +G G FG VY+G L +  
Sbjct:   450 TSMGSKYSNGTTLTSI-TTNANYRIPFAAVKDATNNFDESRNIGVGGFGKVYKGELNDGT 508

Query:   130 KVAVKRGETGSGQGLPEFQTAIIVL 154
             KVAVKRG   S QGL EF+T I +L
Sbjct:   509 KVAVKRGNPKSQQGLAEFRTEIEML 533

GO:0004672 "protein kinase activity" evidence=IEA;IDA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0009742 "brassinosteroid mediated signaling pathway" evidence=IGI

GO:0009791 "post-embryonic development" evidence=IGI

GO:0051510 "regulation of unidimensional cell growth" evidence=IGI;RCA

GO:0009741 "response to brassinosteroid stimulus" evidence=IGI

GO:0009826 "unidimensional cell growth" evidence=IGI

GO:0009506 "plasmodesma" evidence=IDA

TAIR|locus:2151349 THE1 "THESEUS1" [Arabidopsis thaliana (taxid:3702)]

 Score = 171 (65.3 bits), Expect = 1.0e-11, P = 1.0e-11
 Identities = 49/156 (31%), Positives = 74/156 (47%)

Query:    10 VPVVNGPKKKHFMAVVGSVLACSVLICILEIVLSFVLIW-RKQK---PDE-------FPL 58
             +P  +G K K    ++GS++    LI ++ +     L+  RKQ+   P E        PL
Sbjct:   404 LPGGSGSKSKKKAVIIGSLVGAVTLILLIAVCCYCCLVASRKQRSTSPQEGGNGHPWLPL 463

Query:    59 AMDWSLLHVHEXXXXXXXXXXXXXFPVHNVNLGLKIPYVEIKFATHNFDRKLVMGKGAFG 118
              + + L                    + + +LG    + EI  AT+ FD   ++G G FG
Sbjct:   464 PL-YGLSQTLTKSTASHKSATASCISLASTHLGRCFMFQEIMDATNKFDESSLLGVGGFG 522

Query:   119 NVYRGTLRNSMKVAVKRGETGSGQGLPEFQTAIIVL 154
              VY+GTL +  KVAVKRG   S QG+ EF+T I +L
Sbjct:   523 RVYKGTLEDGTKVAVKRGNPRSEQGMAEFRTEIEML 558

GO:0004672 "protein kinase activity" evidence=IEA;IDA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005576 "extracellular region" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0005886 "plasma membrane" evidence=IDA

GO:0046777 "protein autophosphorylation" evidence=IDA

GO:0009742 "brassinosteroid mediated signaling pathway" evidence=IGI

GO:0009791 "post-embryonic development" evidence=IGI

GO:0051510 "regulation of unidimensional cell growth" evidence=IGI;RCA

GO:0009741 "response to brassinosteroid stimulus" evidence=IGI

GO:0009826 "unidimensional cell growth" evidence=IGI

GO:0009506 "plasmodesma" evidence=IDA

TAIR|locus:2123056 CRK32 "cysteine-rich RLK (RECEPTOR-like protein kinase) 32" [Arabidopsis thaliana (taxid:3702)]

 Score = 138 (53.6 bits), Expect = 1.8e-11, Sum P(2) = 1.8e-11
 Identities = 26/63 (41%), Positives = 40/63 (63%)

Query:    92 LKIPYVEIKFATHNFDRKLVMGKGAFGNVYRGTLRNSMKVAVKRGETGSGQGLPEFQTAI 151
             L+  ++ ++ AT  F R   +GKG FG VY+G L N  +VAVKR  + SGQG  EF+  +
Sbjct:   307 LQFDFMTLEAATDKFSRNNKLGKGGFGEVYKGMLPNETEVAVKRLSSNSGQGTQEFKNEV 366

Query:   152 IVL 154
             +++
Sbjct:   367 VIV 369

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005576 "extracellular region" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

UNIPROTKB|Q40234 Pto "Pto disease resistance protein" [Solanum pimpinellifolium (taxid:4084)]

 Score = 159 (61.0 bits), Expect = 3.3e-11, P = 3.3e-11
 Identities = 30/62 (48%), Positives = 43/62 (69%)

Query:    93 KIPYVEIKFATHNFDRKLVMGKGAFGNVYRGTLRNSMKVAVKRGETGSGQGLPEFQTAII 152
             ++P V+++ AT+NFD K ++G G FG VY+G LR+  KVA+KR    S QG+ EF+T I 
Sbjct:    28 RVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIE 87

Query:   153 VL 154
              L
Sbjct:    88 TL 89

GO:0005515 "protein binding" evidence=IPI

TAIR|locus:2204564 HERK2 "hercules receptor kinase 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 166 (63.5 bits), Expect = 3.5e-11, P = 3.5e-11
 Identities = 45/146 (30%), Positives = 67/146 (45%)

Query:    13 VNGPKKKHFMAVVGSVLACSVLICILEIVLSFVLIWRKQKPDEFPL-AMDWSLLHVHEXX 71
             V+  K +     VG+ +A  +    L I++  +   R+ K DE       W  L +H   
Sbjct:   423 VSDSKMRIIWISVGAGIAIIIFFVFLGILVVCLCKKRRSKSDESKNNPPGWRPLFLHVNN 482

Query:    72 XXXXXXXXXXXFPVHNV---NLGLKIPYVEIKFATHNFDRKLVMGKGAFGNVYRGTLRNS 128
                          ++ +    +G K    EI+ AT NFD  L +G G FG VYRG L + 
Sbjct:   483 STANAKATGGSLRLNTLAASTMGRKFTLAEIRAATKNFDDGLAIGVGGFGKVYRGELEDG 542

Query:   129 MKVAVKRGETGSGQGLPEFQTAIIVL 154
               +A+KR    S QGL EF+T I++L
Sbjct:   543 TLIAIKRATPHSQQGLAEFETEIVML 568

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0005886 "plasma membrane" evidence=IDA

GO:0009741 "response to brassinosteroid stimulus" evidence=IGI

GO:0009826 "unidimensional cell growth" evidence=IGI

GO:0051510 "regulation of unidimensional cell growth" evidence=RCA

TAIR|locus:2039717 AT2G39360 [Arabidopsis thaliana (taxid:3702)]

 Score = 160 (61.4 bits), Expect = 1.5e-10, P = 1.5e-10
 Identities = 43/133 (32%), Positives = 63/133 (47%)

Query:    25 VGSVLACSVLICILEIVLSFVLIW---RKQKPDEFPLAMDWSLLHVHEXXXXXXXXXXXX 81
             VG +   S  +C+  +V   V+ W   RK++     +      +H               
Sbjct:   408 VGLIAGLSAALCVA-LVFGVVVSWWCIRKRRRRNRQM----QTVHSRGDDHQIKKNETGE 462

Query:    82 XFPVHNVNLGLKIPYVEIKFATHNFDRKLVMGKGAFGNVYRGTLRNSMKVAVKRGETGSG 141
                  +  +G + P   IK AT +FD  LV+G G FG VY+G LR+  +VAVKRG   S 
Sbjct:   463 SLIFSSSKIGYRYPLALIKEATDDFDESLVIGVGGFGKVYKGVLRDKTEVAVKRGAPQSR 522

Query:   142 QGLPEFQTAIIVL 154
             QGL EF+T + +L
Sbjct:   523 QGLAEFKTEVEML 535

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0010167 "response to nitrate" evidence=RCA

GO:0015706 "nitrate transport" evidence=RCA

GO:0051510 "regulation of unidimensional cell growth" evidence=RCA

TAIR|locus:2174249 AT5G59700 [Arabidopsis thaliana (taxid:3702)]

 Score = 158 (60.7 bits), Expect = 2.5e-10, P = 2.5e-10
 Identities = 41/131 (31%), Positives = 64/131 (48%)

Query:    25 VGSVLACSVLICILEIVLS-FVLIWRKQKPDEFPLAMDWSLLHVHEXXXXXXXXXXXXXF 83
             VG ++  ++   +  +VL  F ++++K+  D+   +  W  L  +               
Sbjct:   404 VGMIIGLTIGSLLALVVLGGFFVLYKKRGRDQDGNSKTWIPLSSNGTTSSSNGTTLASIA 463

Query:    84 PVHNVNLGLKIPYVEIKFATHNFDRKLVMGKGAFGNVYRGTLRNSMKVAVKRGETGSGQG 143
                  N   +IP V +K AT++FD    +G G FG VY+G L +  KVAVKR    S QG
Sbjct:   464 S----NSSYRIPLVAVKEATNSFDENRAIGVGGFGKVYKGELHDGTKVAVKRANPKSQQG 519

Query:   144 LPEFQTAIIVL 154
             L EF+T I +L
Sbjct:   520 LAEFRTEIEML 530

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0009506 "plasmodesma" evidence=IDA

GO:0007062 "sister chromatid cohesion" evidence=RCA

GO:0007131 "reciprocal meiotic recombination" evidence=RCA

GO:0009832 "plant-type cell wall biogenesis" evidence=RCA

GO:0010413 "glucuronoxylan metabolic process" evidence=RCA

GO:0033044 "regulation of chromosome organization" evidence=RCA

GO:0042138 "meiotic DNA double-strand break formation" evidence=RCA

GO:0045132 "meiotic chromosome segregation" evidence=RCA

GO:0045492 "xylan biosynthetic process" evidence=RCA

TAIR|locus:2123126 CRK31 "cysteine-rich RLK (RECEPTOR-like protein kinase) 31" [Arabidopsis thaliana (taxid:3702)]

 Score = 141 (54.7 bits), Expect = 2.5e-10, Sum P(2) = 2.5e-10
 Identities = 26/63 (41%), Positives = 40/63 (63%)

Query:    92 LKIPYVEIKFATHNFDRKLVMGKGAFGNVYRGTLRNSMKVAVKRGETGSGQGLPEFQTAI 151
             L+  +  I+ AT NF R   +G+G FG VY+G L N  ++AVKR  + SGQG  EF+  +
Sbjct:   325 LQFDFTTIEVATDNFSRNNKLGQGGFGEVYKGMLPNETEIAVKRLSSNSGQGTQEFKNEV 384

Query:   152 IVL 154
             +++
Sbjct:   385 VIV 387

GO:0004672 "protein kinase activity" evidence=IEA;ISS

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005576 "extracellular region" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00019576001 SubName- Full=Chromosome chr7 scaffold_20, whole genome shotgun sequence; (856 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	154
pfam07714	258	pfam07714, Pkinase_Tyr, Protein tyrosine kinase	1e-04
cd05041	251	cd05041, PTKc_Fes_like, Catalytic domain of Fes-li	2e-04
smart00221	258	smart00221, STYKc, Protein kinase; unclassified sp	0.001
smart00219	257	smart00219, TyrKc, Tyrosine kinase, catalytic doma	0.001
cd00192	262	cd00192, PTKc, Catalytic domain of Protein Tyrosin	0.002
cd05085	250	cd05085, PTKc_Fer, Catalytic domain of the Protein	0.004

>gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase

 Score = 40.2 bits (95), Expect = 1e-04
 Identities = 17/34 (50%), Positives = 21/34 (61%), Gaps = 7/34 (20%)

Query: 106 FDRKLVMGKGAFGNVYRGTLR-----NSMKVAVK 134
             +KL  G+GAFG VY+GTL+        KVAVK
Sbjct: 3   LGKKL--GEGAFGEVYKGTLKGDGEGTETKVAVK 34

Length = 258

>gnl|CDD|173629 cd05041, PTKc_Fes_like, Catalytic domain of Fes-like Protein Tyrosine Kinases

 Score = 39.8 bits (93), Expect = 2e-04
 Identities = 13/23 (56%), Positives = 19/23 (82%)

Query: 112 MGKGAFGNVYRGTLRNSMKVAVK 134
           +GKG FG+VY+G L+ + +VAVK
Sbjct: 3   IGKGNFGDVYKGVLKGNTEVAVK 25

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions. Length = 251

>gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity

 Score = 37.5 bits (88), Expect = 0.001
 Identities = 16/34 (47%), Positives = 22/34 (64%), Gaps = 7/34 (20%)

Query: 106 FDRKLVMGKGAFGNVYRGTLRN-----SMKVAVK 134
             +KL  G+GAFG VY+GTL+       ++VAVK
Sbjct: 3   LGKKL--GEGAFGEVYKGTLKGKGDGKEVEVAVK 34

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258

>gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain

 Score = 37.5 bits (88), Expect = 0.001
 Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 7/34 (20%)

Query: 106 FDRKLVMGKGAFGNVYRGTLR-----NSMKVAVK 134
             +KL  G+GAFG VY+G L+       ++VAVK
Sbjct: 3   LGKKL--GEGAFGEVYKGKLKGKGGKKKVEVAVK 34

Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257

>gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases

 Score = 37.1 bits (87), Expect = 0.002
 Identities = 13/27 (48%), Positives = 18/27 (66%), Gaps = 4/27 (14%)

Query: 113 GKGAFGNVYRGTLR----NSMKVAVKR 135
           G+GAFG VY+G L+     + +VAVK 
Sbjct: 4   GEGAFGEVYKGKLKGKDGKTTEVAVKT 30

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262

>gnl|CDD|133216 cd05085, PTKc_Fer, Catalytic domain of the Protein Tyrosine Kinase, Fer

 Score = 35.7 bits (82), Expect = 0.004
 Identities = 13/24 (54%), Positives = 19/24 (79%)

Query: 111 VMGKGAFGNVYRGTLRNSMKVAVK 134
           ++GKG FG V++GTL++   VAVK
Sbjct: 2   LLGKGNFGEVFKGTLKDKTPVAVK 25

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-cell interactions mediated by adherens junctions and focal adhesions. Fer kinase also regulates cell cycle progression in malignant cells. Length = 250

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	154
KOG1187	361	consensus Serine/threonine protein kinase [Signal	99.34
KOG0196	996	consensus Tyrosine kinase, EPH (ephrin) receptor f	98.99
KOG3653	534	consensus Transforming growth factor beta/activin	98.8
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	98.6
KOG1026	774	consensus Nerve growth factor receptor TRKA and re	98.59
KOG1094	807	consensus Discoidin domain receptor DDR1 [Signal t	98.54
KOG2052	513	consensus Activin A type IB receptor, serine/threo	98.48
KOG1025	1177	consensus Epidermal growth factor receptor EGFR an	98.26
KOG0193	678	consensus Serine/threonine protein kinase RAF [Sig	97.86
PLN03224	507	probable serine/threonine protein kinase; Provisio	97.69
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	97.66
PF08693	40	SKG6: Transmembrane alpha-helix domain; InterPro:	97.5
KOG0197	468	consensus Tyrosine kinases [Signal transduction me	97.43
KOG0192	362	consensus Tyrosine kinase specific for activated (	97.42
KOG0595	429	consensus Serine/threonine-protein kinase involved	97.32
KOG0199	1039	consensus ACK and related non-receptor tyrosine ki	97.31
PRK09188	365	serine/threonine protein kinase; Provisional	97.31
KOG1095	1025	consensus Protein tyrosine kinase [Signal transduc	97.24
KOG0194	474	consensus Protein tyrosine kinase [Signal transduc	97.15
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	97.14
KOG1024	563	consensus Receptor-like protein tyrosine kinase RY	97.11
KOG0600	560	consensus Cdc2-related protein kinase [Cell cycle	97.04
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	97.04
KOG0658	364	consensus Glycogen synthase kinase-3 [Carbohydrate	97.0
PF04478	154	Mid2: Mid2 like cell wall stress sensor; InterPro:	97.0
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	96.95
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	96.93
PHA02988	283	hypothetical protein; Provisional	96.91
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	96.91
KOG0580	281	consensus Serine/threonine protein kinase [Cell cy	96.9
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	96.9
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	96.9
KOG0659	318	consensus Cdk activating kinase (CAK)/RNA polymera	96.89
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	96.87
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	96.86
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	96.85
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	96.84
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	96.84
KOG4236	888	consensus Serine/threonine protein kinase PKC mu/P	96.84
KOG4278	1157	consensus Protein tyrosine kinase [Signal transduc	96.82
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	96.81
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	96.76
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	96.76
PF01102	122	Glycophorin_A: Glycophorin A; InterPro: IPR001195	96.74
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	96.74
PTZ00284	467	protein kinase; Provisional	96.74
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	96.71
PF12877	684	DUF3827: Domain of unknown function (DUF3827); Int	96.7
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	96.7
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	96.69
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	96.67
PLN00034	353	mitogen-activated protein kinase kinase; Provision	96.65
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	96.65
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	96.62
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	96.6
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	96.59
KOG0201	467	consensus Serine/threonine protein kinase [Signal	96.59
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	96.58
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	96.57
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	96.53
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	96.51
KOG0593	396	consensus Predicted protein kinase KKIAMRE [Genera	96.5
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	96.49
PTZ00283	496	serine/threonine protein kinase; Provisional	96.48
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	96.47
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	96.45
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	96.42
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	96.4
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	96.4
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	96.39
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	96.39
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	96.38
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	96.38
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	96.36
KOG0575	592	consensus Polo-like serine/threonine protein kinas	96.34
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	96.33
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	96.32
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	96.29
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	96.28
PTZ00263	329	protein kinase A catalytic subunit; Provisional	96.25
PTZ00036	440	glycogen synthase kinase; Provisional	96.25
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	96.22
KOG0198	313	consensus MEKK and related serine/threonine protei	96.22
TIGR01982	437	UbiB 2-polyprenylphenol 6-hydroxylase. This model	96.22
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	96.21
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	96.2
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	96.2
KOG0591	375	consensus NIMA (never in mitosis)-related G2-speci	96.2
KOG4257	974	consensus Focal adhesion tyrosine kinase FAK, cont	96.16
KOG0597	808	consensus Serine-threonine protein kinase FUSED [G	96.11
KOG0663	419	consensus Protein kinase PITSLRE and related kinas	96.11
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	96.1
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	96.1
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	96.09
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	96.07
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	96.05
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	96.04
KOG0594	323	consensus Protein kinase PCTAIRE and related kinas	96.04
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	96.02
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	96.02
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	96.02
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	96.0
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	96.0
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	96.0
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	95.97
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	95.96
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	95.96
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	95.95
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	95.95
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	95.95
PTZ00382	96	Variant-specific surface protein (VSP); Provisiona	95.94
PF08374	221	Protocadherin: Protocadherin; InterPro: IPR013585	95.94
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	95.92
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	95.92
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	95.91
cd05144	198	RIO2_C RIO kinase family; RIO2, C-terminal catalyt	95.9
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	95.9
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	95.88
PLN00009	294	cyclin-dependent kinase A; Provisional	95.88
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	95.87
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	95.87
PF02439	38	Adeno_E3_CR2: Adenovirus E3 region protein CR2; In	95.86
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	95.84
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	95.84
KOG1989	738	consensus ARK protein kinase family [Signal transd	95.84
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	95.83
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	95.81
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	95.81
PF15102	146	TMEM154: TMEM154 protein family	95.8
KOG4250	732	consensus TANK binding protein kinase TBK1 [Signal	95.8
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	95.8
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	95.79
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	95.79
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	95.78
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	95.77
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	95.75
KOG0581	364	consensus Mitogen-activated protein kinase kinase	95.75
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	95.74
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	95.72
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	95.72
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	95.71
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	95.71
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	95.7
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	95.69
KOG1006	361	consensus Mitogen-activated protein kinase (MAPK)	95.65
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	95.65
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	95.65
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	95.62
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	95.61
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	95.6
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	95.59
KOG0605	550	consensus NDR and related serine/threonine kinases	95.58
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	95.52
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	95.52
KOG0662	292	consensus Cyclin-dependent kinase CDK5 [Intracellu	95.52
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	95.49
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	95.47
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	95.44
PF03109	119	ABC1: ABC1 family; InterPro: IPR004147 This entry	95.41
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	95.39
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	95.38
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	95.37
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	95.36
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	95.36
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	95.35
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	95.35
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	95.33
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	95.33
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	95.32
PF06365	202	CD34_antigen: CD34/Podocalyxin family; InterPro: I	95.28
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	95.28
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	95.27
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	95.27
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	95.25
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	95.24
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	95.24
KOG0032	382	consensus Ca2+/calmodulin-dependent protein kinase	95.21
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	95.2
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	95.18
KOG0694	694	consensus Serine/threonine protein kinase [Signal	95.16
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	95.13
KOG0577	948	consensus Serine/threonine protein kinase [Signal	95.12
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	95.08
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	95.07
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	95.05
KOG0200	609	consensus Fibroblast/platelet-derived growth facto	95.04
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	95.01
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	94.98
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	94.97
PF14575	75	EphA2_TM: Ephrin type-A receptor 2 transmembrane d	94.96
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	94.95
PTZ00024	335	cyclin-dependent protein kinase; Provisional	94.89
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	94.83
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	94.81
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	94.78
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	94.77
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	94.77
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	94.76
smart00090	237	RIO RIO-like kinase.	94.62
PF15345	233	TMEM51: Transmembrane protein 51	94.59
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	94.58
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	94.51
PF01034	64	Syndecan: Syndecan domain; InterPro: IPR001050 The	94.47
PRK04750	537	ubiB putative ubiquinone biosynthesis protein UbiB	94.47
PF05454	290	DAG1: Dystroglycan (Dystrophin-associated glycopro	94.47
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	94.45
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	94.44
PF02439	38	Adeno_E3_CR2: Adenovirus E3 region protein CR2; In	94.39
KOG0582	516	consensus Ste20-like serine/threonine protein kina	94.38
PF02009	299	Rifin_STEVOR: Rifin/stevor family; InterPro: IPR00	94.34
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	94.34
PRK09605	535	bifunctional UGMP family protein/serine/threonine	94.3
PHA03212	391	serine/threonine kinase US3; Provisional	94.19
PF06697	278	DUF1191: Protein of unknown function (DUF1191); In	94.15
KOG0667	586	consensus Dual-specificity tyrosine-phosphorylatio	93.94
PHA02882	294	putative serine/threonine kinase; Provisional	93.94
KOG0607	463	consensus MAP kinase-interacting kinase and relate	93.75
PF02480	439	Herpes_gE: Alphaherpesvirus glycoprotein E; InterP	93.65
PTZ00266	1021	NIMA-related protein kinase; Provisional	93.52
PF05393	94	Hum_adeno_E3A: Human adenovirus early E3A glycopro	93.37
KOG0574	502	consensus STE20-like serine/threonine kinase MST [	93.32
KOG0598	357	consensus Ribosomal protein S6 kinase and related	93.26
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	93.13
PHA03211	461	serine/threonine kinase US3; Provisional	93.11
PF13908	179	Shisa: Wnt and FGF inhibitory regulator	92.95
KOG1167	418	consensus Serine/threonine protein kinase of the C	92.76
KOG0615	475	consensus Serine/threonine protein kinase Chk2 and	92.43
KOG1164	322	consensus Casein kinase (serine/threonine/tyrosine	92.35
PTZ00046	358	rifin; Provisional	92.3
PF03302	397	VSP: Giardia variant-specific surface protein; Int	92.12
KOG1163	341	consensus Casein kinase (serine/threonine/tyrosine	92.01
PTZ00267	478	NIMA-related protein kinase; Provisional	91.99
TIGR01477	353	RIFIN variant surface antigen, rifin family. This	91.96
KOG0660	359	consensus Mitogen-activated protein kinase [Signal	91.95
KOG0661	538	consensus MAPK related serine/threonine protein ki	91.94
PF01034	64	Syndecan: Syndecan domain; InterPro: IPR001050 The	91.52
TIGR01478	295	STEVOR variant surface antigen, stevor family. Thi	91.48
PHA03207	392	serine/threonine kinase US3; Provisional	91.42
PF15069	143	FAM163: FAM163 family	91.36
KOG0583	370	consensus Serine/threonine protein kinase [Signal	91.23
KOG0578	550	consensus p21-activated serine/threonine protein k	91.21
PTZ00370	296	STEVOR; Provisional	91.13
PF04689	69	S1FA: DNA binding protein S1FA; InterPro: IPR00677	91.07
PRK10359	232	lipopolysaccharide core biosynthesis protein; Prov	91.04
PF01299	306	Lamp: Lysosome-associated membrane glycoprotein (L	91.02
PF03229	126	Alpha_GJ: Alphavirus glycoprotein J; InterPro: IPR	90.93
PF04478	154	Mid2: Mid2 like cell wall stress sensor; InterPro:	90.9
PHA03265	402	envelope glycoprotein D; Provisional	90.85
PHA03209	357	serine/threonine kinase US3; Provisional	90.76
PF15050	133	SCIMP: SCIMP protein	90.72
KOG0579	1187	consensus Ste20-like serine/threonine protein kina	90.53
KOG1166	974	consensus Mitotic checkpoint serine/threonine prot	90.37
PF15176	102	LRR19-TM: Leucine-rich repeat family 19 TM domain	90.28
KOG0586	596	consensus Serine/threonine protein kinase [General	90.24
PF12191	129	stn_TNFRSF12A: Tumour necrosis factor receptor stn	90.13
PF07204	98	Orthoreo_P10: Orthoreovirus membrane fusion protei	90.05
KOG1027	903	consensus Serine/threonine protein kinase and endo	89.97
KOG0587	953	consensus Traf2- and Nck-interacting kinase and re	89.47
PTZ00208	436	65 kDa invariant surface glycoprotein; Provisional	89.24
COG0661	517	AarF Predicted unusual protein kinase [General fun	89.11
KOG0611	668	consensus Predicted serine/threonine protein kinas	88.84
PF10873	155	DUF2668: Protein of unknown function (DUF2668); In	88.79
KOG4279	1226	consensus Serine/threonine protein kinase [Signal	88.37
KOG2345	302	consensus Serine/threonine protein kinase/TGF-beta	88.26
PF07213	79	DAP10: DAP10 membrane protein; InterPro: IPR009861	87.92
KOG0596	677	consensus Dual specificity; serine/threonine and t	87.79
PF05568	189	ASFV_J13L: African swine fever virus J13L protein;	87.72
KOG0984	282	consensus Mitogen-activated protein kinase (MAPK)	87.66
PHA03265	402	envelope glycoprotein D; Provisional	87.64
PF14610	189	DUF4448: Protein of unknown function (DUF4448)	87.15
PF12768	281	Rax2: Cortical protein marker for cell polarity	86.89
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	86.75
PHA03210	501	serine/threonine kinase US3; Provisional	86.19
KOG0610	459	consensus Putative serine/threonine protein kinase	86.07
COG2112	201	Predicted Ser/Thr protein kinase [Signal transduct	85.67
KOG4258	1025	consensus Insulin/growth factor receptor (contains	85.58
KOG0986	591	consensus G protein-coupled receptor kinase [Signa	85.28
KOG1165	449	consensus Casein kinase (serine/threonine/tyrosine	85.23
PF10577	807	UPF0560: Uncharacterised protein family UPF0560; I	85.17
KOG0983	391	consensus Mitogen-activated protein kinase (MAPK)	84.84
KOG4721	904	consensus Serine/threonine protein kinase, contain	84.67
KOG1151	775	consensus Tousled-like protein kinase [Signal tran	84.19
KOG0669	376	consensus Cyclin T-dependent kinase CDK9 [Cell cyc	84.08
PF02480	439	Herpes_gE: Alphaherpesvirus glycoprotein E; InterP	83.89
PHA03099	139	epidermal growth factor-like protein (EGF-like pro	83.44
KOG0616	355	consensus cAMP-dependent protein kinase catalytic	82.03
PF01102	122	Glycophorin_A: Glycophorin A; InterPro: IPR001195	81.76
PF14914	154	LRRC37AB_C: LRRC37A/B like protein 1 C-terminal do	81.63
KOG0612	1317	consensus Rho-associated, coiled-coil containing p	81.52
KOG0664	449	consensus Nemo-like MAPK-related serine/threonine	80.08

>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.34  E-value=2.5e-12  Score=97.70  Aligned_cols=65  Identities=40%  Similarity=0.628  Sum_probs=56.5

Q ss_pred             CcccccHHHHHHhhcCccccceeecCCCcceEEEEeCCCCEEEEEEecCCCCCChHHHHHHHhhC
Q 043043           90 LGLKIPYVEIKFATHNFDRKLVMGKGAFGNVYRGTLRNSMKVAVKRGETGSGQGLPEFQTAIIVL  154 (154)
Q Consensus        90 ~~~~~~~~~l~~at~~f~~~~~iG~g~~g~vy~g~l~~g~~vaVK~l~~~~~~~~~~f~~e~~~l  154 (154)
                      ..+.|++.+|..||++|+..++||+|+||.||+|.+++|..||||++.....+...+|.+|+++|
T Consensus        61 ~~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~~~eF~~Ei~~l  125 (361)
T KOG1187|consen   61 PLRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQGEREFLNEVEIL  125 (361)
T ss_pred             CcceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcchhHHHHHHHHH
Confidence            45679999999999999999999999999999999999999999999755433146699999864

>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]

Probab=98.99  E-value=3.6e-10  Score=91.09  Aligned_cols=47  Identities=28%  Similarity=0.538  Sum_probs=38.5

Q ss_pred             ccceeecCCCcceEEEEeC----CCCEEEEEEecCC-CCCChHHHHHHHhhC
Q 043043          108 RKLVMGKGAFGNVYRGTLR----NSMKVAVKRGETG-SGQGLPEFQTAIIVL  154 (154)
Q Consensus       108 ~~~~iG~g~~g~vy~g~l~----~g~~vaVK~l~~~-~~~~~~~f~~e~~~l  154 (154)
                      .+.+||.|.||+||+|.|+    ....||+|.|+.. ...++.+|+.|+.+|
T Consensus       633 Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIM  684 (996)
T KOG0196|consen  633 IEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIM  684 (996)
T ss_pred             EEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhc
Confidence            5568999999999999984    2357999999865 455668999999876

>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]

Probab=98.80  E-value=2.6e-08  Score=76.56  Aligned_cols=43  Identities=30%  Similarity=0.375  Sum_probs=32.1

Q ss_pred             ccccceeecCCCcceEEEEeCCCCEEEEEEecCCCCCChHHHHHHHh
Q 043043          106 FDRKLVMGKGAFGNVYRGTLRNSMKVAVKRGETGSGQGLPEFQTAII  152 (154)
Q Consensus       106 f~~~~~iG~g~~g~vy~g~l~~g~~vaVK~l~~~~~~~~~~f~~e~~  152 (154)
                      +....+||+|+||.||||.+.+ ..||||.+....   ..+|.+|=+
T Consensus       212 l~l~eli~~Grfg~V~KaqL~~-~~VAVKifp~~~---kqs~~~Ek~  254 (534)
T KOG3653|consen  212 LQLLELIGRGRFGCVWKAQLDN-RLVAVKIFPEQE---KQSFQNEKN  254 (534)
T ss_pred             hhhHHHhhcCccceeehhhccC-ceeEEEecCHHH---HHHHHhHHH
Confidence            3344679999999999999965 899999995332   345666643

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=98.60  E-value=1.1e-06  Score=74.75  Aligned_cols=43  Identities=26%  Similarity=0.391  Sum_probs=34.2

Q ss_pred             ccHHHHHHhhcCccccceeecCCCcceEEEEe-CCCCEEEEEEecCC
Q 043043           94 IPYVEIKFATHNFDRKLVMGKGAFGNVYRGTL-RNSMKVAVKRGETG  139 (154)
Q Consensus        94 ~~~~~l~~at~~f~~~~~iG~g~~g~vy~g~l-~~g~~vaVK~l~~~  139 (154)
                      +++.++..   .+.+.++||+|+||.||+|.. .++..||||++...
T Consensus       683 ~~~~~~~~---~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~  726 (968)
T PLN00113        683 ITINDILS---SLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDV  726 (968)
T ss_pred             hhHHHHHh---hCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCC
Confidence            45555544   467789999999999999997 57889999999643

>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]

Probab=98.59  E-value=3.2e-08  Score=80.33  Aligned_cols=49  Identities=27%  Similarity=0.344  Sum_probs=38.5

Q ss_pred             ccccceeecCCCcceEEEEeC------CCCEEEEEEecCCCCC-ChHHHHHHHhhC
Q 043043          106 FDRKLVMGKGAFGNVYRGTLR------NSMKVAVKRGETGSGQ-GLPEFQTAIIVL  154 (154)
Q Consensus       106 f~~~~~iG~g~~g~vy~g~l~------~g~~vaVK~l~~~~~~-~~~~f~~e~~~l  154 (154)
                      ......||+|.||.||+|...      +.+.||||.|+..... .+.+|.+|+++|
T Consensus       488 i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLl  543 (774)
T KOG1026|consen  488 IVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELL  543 (774)
T ss_pred             eeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHH
Confidence            334456999999999999874      3468999999765444 678999999875

>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]

Probab=98.54  E-value=8e-07  Score=70.42  Aligned_cols=49  Identities=29%  Similarity=0.386  Sum_probs=40.1

Q ss_pred             ccccceeecCCCcceEEEEeCCCCEEEEEEecCCCCC-ChHHHHHHHhhC
Q 043043          106 FDRKLVMGKGAFGNVYRGTLRNSMKVAVKRGETGSGQ-GLPEFQTAIIVL  154 (154)
Q Consensus       106 f~~~~~iG~g~~g~vy~g~l~~g~~vaVK~l~~~~~~-~~~~f~~e~~~l  154 (154)
                      +--...||+|.||+|..+...++..||||+|...... .+++|..|+.+|
T Consensus       540 L~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~~~r~~F~kEIkiL  589 (807)
T KOG1094|consen  540 LRFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDATKNARNDFLKEIKIL  589 (807)
T ss_pred             eehhhhhcCcccceeEEEEecCceEEEEeecCcccchhHHHHHHHHHHHH
Confidence            3344569999999999999988899999999765433 458999999875

>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.48  E-value=2.3e-07  Score=71.02  Aligned_cols=44  Identities=30%  Similarity=0.416  Sum_probs=34.6

Q ss_pred             ccccceeecCCCcceEEEEeCCCCEEEEEEecCCCCCChHHHHHHHhh
Q 043043          106 FDRKLVMGKGAFGNVYRGTLRNSMKVAVKRGETGSGQGLPEFQTAIIV  153 (154)
Q Consensus       106 f~~~~~iG~g~~g~vy~g~l~~g~~vaVK~l~~~~~~~~~~f~~e~~~  153 (154)
                      ......||+|+||+||+|.++ |..||||.+...   +.++|.+|.|+
T Consensus       213 I~L~e~IGkGRyGEVwrG~wr-Ge~VAVKiF~sr---dE~SWfrEtEI  256 (513)
T KOG2052|consen  213 IVLQEIIGKGRFGEVWRGRWR-GEDVAVKIFSSR---DERSWFRETEI  256 (513)
T ss_pred             eEEEEEecCccccceeecccc-CCceEEEEeccc---chhhhhhHHHH
Confidence            455578999999999999996 688999999643   24567777764

>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]

Probab=98.26  E-value=6e-07  Score=73.59  Aligned_cols=48  Identities=29%  Similarity=0.428  Sum_probs=36.0

Q ss_pred             cccceeecCCCcceEEEEe-CCC----CEEEEEEecCC-CCCChHHHHHHHhhC
Q 043043          107 DRKLVMGKGAFGNVYRGTL-RNS----MKVAVKRGETG-SGQGLPEFQTAIIVL  154 (154)
Q Consensus       107 ~~~~~iG~g~~g~vy~g~l-~~g----~~vaVK~l~~~-~~~~~~~f~~e~~~l  154 (154)
                      .+..+||.|.||+||+|.+ |+|    .+||+|.+... ..+...+|..|+-+|
T Consensus       699 kk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~m  752 (1177)
T KOG1025|consen  699 KKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRM  752 (1177)
T ss_pred             hhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHH
Confidence            3457899999999999987 544    57999999643 344457888887543

>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]

Probab=97.86  E-value=1.8e-05  Score=63.04  Aligned_cols=47  Identities=34%  Similarity=0.511  Sum_probs=35.3

Q ss_pred             ccccceeecCCCcceEEEEeCCCCEEEEEEecCC--CCCChHHHHHHHhhC
Q 043043          106 FDRKLVMGKGAFGNVYRGTLRNSMKVAVKRGETG--SGQGLPEFQTAIIVL  154 (154)
Q Consensus       106 f~~~~~iG~g~~g~vy~g~l~~g~~vaVK~l~~~--~~~~~~~f~~e~~~l  154 (154)
                      +.....||+|+||+||+|.+-+  .||||.|+..  +..+...|.+|+..+
T Consensus       394 v~l~~rIGsGsFGtV~Rg~whG--dVAVK~Lnv~~pt~~qlqaFKnEVa~l  442 (678)
T KOG0193|consen  394 VLLGERIGSGSFGTVYRGRWHG--DVAVKLLNVDDPTPEQLQAFKNEVAVL  442 (678)
T ss_pred             hhccceeccccccceeeccccc--ceEEEEEecCCCCHHHHHHHHHHHHHH
Confidence            3344679999999999999963  4999999643  333456799998653

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=97.69  E-value=6.1e-05  Score=59.98  Aligned_cols=48  Identities=21%  Similarity=0.389  Sum_probs=35.1

Q ss_pred             hhcCccccceeecCCCcceEEEEe-----------------CCCCEEEEEEecCCCCCChHHHHH
Q 043043          102 ATHNFDRKLVMGKGAFGNVYRGTL-----------------RNSMKVAVKRGETGSGQGLPEFQT  149 (154)
Q Consensus       102 at~~f~~~~~iG~g~~g~vy~g~l-----------------~~g~~vaVK~l~~~~~~~~~~f~~  149 (154)
                      ..++|...++||+|+||.||+|..                 .++..||||++.........+|.+
T Consensus       143 ~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~  207 (507)
T PLN03224        143 SSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLK  207 (507)
T ss_pred             cccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHh
Confidence            356788889999999999999974                 235679999996443333345554

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=97.66  E-value=4.5e-05  Score=55.19  Aligned_cols=56  Identities=20%  Similarity=0.394  Sum_probs=43.0

Q ss_pred             HHHHhhcCccccceeecCCCcceEEEEeC-CCCEEEEEEecCCCCCChHHHHHHHhh
Q 043043           98 EIKFATHNFDRKLVMGKGAFGNVYRGTLR-NSMKVAVKRGETGSGQGLPEFQTAIIV  153 (154)
Q Consensus        98 ~l~~at~~f~~~~~iG~g~~g~vy~g~l~-~g~~vaVK~l~~~~~~~~~~f~~e~~~  153 (154)
                      |++.++.++....+||+|+||.||+|... ++..|++|.+..........|.+|+++
T Consensus         2 ~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~   58 (268)
T cd06624           2 EYEYEYDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIAL   58 (268)
T ss_pred             CcccccccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHH
Confidence            45667888888899999999999999864 567899998864433344567777754

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>PF08693 SKG6: Transmembrane alpha-helix domain; InterPro: IPR014805 SKG6 and AXL2 are membrane proteins that show polarised intracellular localisation [, ]

Probab=97.50  E-value=5.8e-05  Score=38.52  Aligned_cols=34  Identities=24%  Similarity=0.339  Sum_probs=18.7

Q ss_pred             CCCcceeEEEehhHHHHHHHHHHHHHHHHHHHHh
Q 043043           16 PKKKHFMAVVGSVLACSVLICILEIVLSFVLIWR   49 (154)
Q Consensus        16 ~~~~~~~~ii~~~v~~~vll~i~~~~~~~~~~~r   49 (154)
                      ..+....+.++++++++++++++++++++++||+
T Consensus         6 ~~~~~vaIa~~VvVPV~vI~~vl~~~l~~~~rR~   39 (40)
T PF08693_consen    6 SNSNTVAIAVGVVVPVGVIIIVLGAFLFFWYRRK   39 (40)
T ss_pred             CCCceEEEEEEEEechHHHHHHHHHHhheEEecc
Confidence            3444555666666666666655555555444443

This entry represents the highly conserved transmembrane alpha-helical domain found in these proteins [, ]. The full-length AXL2 protein has a negative regulatory function in cytokinesis [].

>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]

Probab=97.43  E-value=0.00014  Score=56.79  Aligned_cols=44  Identities=32%  Similarity=0.485  Sum_probs=37.2

Q ss_pred             ceeecCCCcceEEEEeCCCCEEEEEEecCCCCCChHHHHHHHhhC
Q 043043          110 LVMGKGAFGNVYRGTLRNSMKVAVKRGETGSGQGLPEFQTAIIVL  154 (154)
Q Consensus       110 ~~iG~g~~g~vy~g~l~~g~~vaVK~l~~~~~~~~~~f~~e~~~l  154 (154)
                      +.||+|.||+||.|.+++...||+|.+... ..+..+|.+|+.+|
T Consensus       212 ~~LG~G~FG~V~~g~~~~~~~vavk~ik~~-~m~~~~f~~Ea~iM  255 (468)
T KOG0197|consen  212 RELGSGQFGEVWLGKWNGSTKVAVKTIKEG-SMSPEAFLREAQIM  255 (468)
T ss_pred             HHhcCCccceEEEEEEcCCCcccceEEecc-ccChhHHHHHHHHH
Confidence            569999999999999988789999999755 33457899999875

>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]

Probab=97.42  E-value=0.00017  Score=55.12  Aligned_cols=45  Identities=33%  Similarity=0.468  Sum_probs=34.3

Q ss_pred             ceeecCCCcceEEEEeCCCCEEEEEEecCCCCC--ChHHHHHHHhhC
Q 043043          110 LVMGKGAFGNVYRGTLRNSMKVAVKRGETGSGQ--GLPEFQTAIIVL  154 (154)
Q Consensus       110 ~~iG~g~~g~vy~g~l~~g~~vaVK~l~~~~~~--~~~~f~~e~~~l  154 (154)
                      ..||+|+||+||+|.+.+-..||||.+......  ..++|.+|+.+|
T Consensus        47 ~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~~~~f~~E~~il   93 (362)
T KOG0192|consen   47 EVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDESRKAFRREASLL   93 (362)
T ss_pred             hhcccCCceeEEEEEeCCceeEEEEEecchhcChHHHHHHHHHHHHH
Confidence            459999999999999965444999999643222  256899999764

>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=97.32  E-value=0.00016  Score=55.15  Aligned_cols=49  Identities=22%  Similarity=0.392  Sum_probs=34.8

Q ss_pred             ccccceeecCCCcceEEEEeC-CCCEEEEEEecCC--CCCChHHHHHHHhhC
Q 043043          106 FDRKLVMGKGAFGNVYRGTLR-NSMKVAVKRGETG--SGQGLPEFQTAIIVL  154 (154)
Q Consensus       106 f~~~~~iG~g~~g~vy~g~l~-~g~~vaVK~l~~~--~~~~~~~f~~e~~~l  154 (154)
                      |.....||+|.|+.||+|+.. ++..||||++...  +....+-...|+.+|
T Consensus        12 y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iL   63 (429)
T KOG0595|consen   12 YELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKIL   63 (429)
T ss_pred             ceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHH
Confidence            333445999999999999985 5789999999643  333344566677654

>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]

Probab=97.31  E-value=0.00021  Score=58.37  Aligned_cols=45  Identities=31%  Similarity=0.387  Sum_probs=35.9

Q ss_pred             ceeecCCCcceEEEEeC--CCC--EEEEEEecCCCCC-ChHHHHHHHhhC
Q 043043          110 LVMGKGAFGNVYRGTLR--NSM--KVAVKRGETGSGQ-GLPEFQTAIIVL  154 (154)
Q Consensus       110 ~~iG~g~~g~vy~g~l~--~g~--~vaVK~l~~~~~~-~~~~f~~e~~~l  154 (154)
                      ++||+|+||.|++|.|.  +|.  .||||+|...... ..++|++|+.+|
T Consensus       116 e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M  165 (1039)
T KOG0199|consen  116 ELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHM  165 (1039)
T ss_pred             HHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHH
Confidence            56999999999999984  454  6899999765443 568999999764

>PRK09188 serine/threonine protein kinase; Provisional

Probab=97.31  E-value=0.00035  Score=53.48  Aligned_cols=52  Identities=21%  Similarity=0.210  Sum_probs=37.4

Q ss_pred             hcCccccceeecCCCcceEEEEeC--CCCEEEEEEecCCC-----CCChHHHHHHHhhC
Q 043043          103 THNFDRKLVMGKGAFGNVYRGTLR--NSMKVAVKRGETGS-----GQGLPEFQTAIIVL  154 (154)
Q Consensus       103 t~~f~~~~~iG~g~~g~vy~g~l~--~g~~vaVK~l~~~~-----~~~~~~f~~e~~~l  154 (154)
                      ..+|...++||+|+||.||++...  ++..+|||++....     ......|.+|+++|
T Consensus        17 ~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL   75 (365)
T PRK09188         17 SARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRAL   75 (365)
T ss_pred             cCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHH
Confidence            345777789999999999999874  56778999875321     11234588888764

>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=97.24  E-value=0.00024  Score=60.31  Aligned_cols=50  Identities=38%  Similarity=0.624  Sum_probs=38.1

Q ss_pred             CccccceeecCCCcceEEEEeCC--C----CEEEEEEecC-CCCCChHHHHHHHhhC
Q 043043          105 NFDRKLVMGKGAFGNVYRGTLRN--S----MKVAVKRGET-GSGQGLPEFQTAIIVL  154 (154)
Q Consensus       105 ~f~~~~~iG~g~~g~vy~g~l~~--g----~~vaVK~l~~-~~~~~~~~f~~e~~~l  154 (154)
                      +....+.||+|.||.||.|.+.+  |    ..||||.|.. .+.+...+|.+|..+|
T Consensus       693 ~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m  749 (1025)
T KOG1095|consen  693 NVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLM  749 (1025)
T ss_pred             heEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHH
Confidence            34556789999999999999853  2    4599999964 3455667899998765

>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=97.15  E-value=0.00034  Score=55.06  Aligned_cols=48  Identities=31%  Similarity=0.525  Sum_probs=35.3

Q ss_pred             cccceeecCCCcceEEEEeCC--C---CEEEEEEecC---CCCCChHHHHHHHhhC
Q 043043          107 DRKLVMGKGAFGNVYRGTLRN--S---MKVAVKRGET---GSGQGLPEFQTAIIVL  154 (154)
Q Consensus       107 ~~~~~iG~g~~g~vy~g~l~~--g---~~vaVK~l~~---~~~~~~~~f~~e~~~l  154 (154)
                      ....+||+|.||+||+|.+.-  +   ..||||....   .......+|.+|+.+|
T Consensus       160 ~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvM  215 (474)
T KOG0194|consen  160 ELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVM  215 (474)
T ss_pred             cccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHH
Confidence            344789999999999999843  2   2389999864   2334457899999765

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=97.14  E-value=0.00083  Score=48.33  Aligned_cols=47  Identities=28%  Similarity=0.403  Sum_probs=37.0

Q ss_pred             ccccceeecCCCcceEEEEeCCCCEEEEEEecCCCCCChHHHHHHHhh
Q 043043          106 FDRKLVMGKGAFGNVYRGTLRNSMKVAVKRGETGSGQGLPEFQTAIIV  153 (154)
Q Consensus       106 f~~~~~iG~g~~g~vy~g~l~~g~~vaVK~l~~~~~~~~~~f~~e~~~  153 (154)
                      |.-...||+|+||.||++..+++..+|+|.+.... ....+|.+|+.+
T Consensus         8 ~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~-~~~~~~~~E~~~   54 (260)
T cd05067           8 LKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGS-MSPEAFLAEANL   54 (260)
T ss_pred             ceeeeeeccCccceEEeeecCCCceEEEEEecCCC-CcHHHHHHHHHH
Confidence            44457899999999999999888999999986332 335678888765

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]

Probab=97.11  E-value=0.00046  Score=52.93  Aligned_cols=57  Identities=21%  Similarity=0.324  Sum_probs=37.7

Q ss_pred             HHHHHHhhcCccccceeecCCCcceEEEEeCC------CCEEEEEEecCC-CCCChHHHHHHHh
Q 043043           96 YVEIKFATHNFDRKLVMGKGAFGNVYRGTLRN------SMKVAVKRGETG-SGQGLPEFQTAII  152 (154)
Q Consensus        96 ~~~l~~at~~f~~~~~iG~g~~g~vy~g~l~~------g~~vaVK~l~~~-~~~~~~~f~~e~~  152 (154)
                      ..+|.....++....++-+|.||+||+|.|.+      -+.|-||.+... +.-+.+.|.+|..
T Consensus       276 ~~~l~v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~  339 (563)
T KOG1024|consen  276 LQELTVQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESM  339 (563)
T ss_pred             HHhhhhhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHH
Confidence            34555555667777789999999999997743      345678877433 3334456666654

>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=97.04  E-value=0.00055  Score=53.74  Aligned_cols=49  Identities=24%  Similarity=0.361  Sum_probs=35.7

Q ss_pred             ccccceeecCCCcceEEEE-eCCCCEEEEEEecCC--CCCChHHHHHHHhhC
Q 043043          106 FDRKLVMGKGAFGNVYRGT-LRNSMKVAVKRGETG--SGQGLPEFQTAIIVL  154 (154)
Q Consensus       106 f~~~~~iG~g~~g~vy~g~-l~~g~~vaVK~l~~~--~~~~~~~f~~e~~~l  154 (154)
                      |.....||+|.||.||+++ +..|..||.|++...  ......-..+||.+|
T Consensus       119 feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~IL  170 (560)
T KOG0600|consen  119 FEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKIL  170 (560)
T ss_pred             HHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHH
Confidence            4445679999999999986 567899999999543  233344556787664

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=97.04  E-value=0.00044  Score=49.70  Aligned_cols=50  Identities=26%  Similarity=0.457  Sum_probs=38.5

Q ss_pred             cCccccceeecCCCcceEEEEeCCCCEEEEEEecCCCCCChHHHHHHHhh
Q 043043          104 HNFDRKLVMGKGAFGNVYRGTLRNSMKVAVKRGETGSGQGLPEFQTAIIV  153 (154)
Q Consensus       104 ~~f~~~~~iG~g~~g~vy~g~l~~g~~vaVK~l~~~~~~~~~~f~~e~~~  153 (154)
                      .+|.-.+.||.|++|.||++...++..+++|.+.........++..|+.+
T Consensus         6 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~   55 (261)
T cd05148           6 EEFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQA   55 (261)
T ss_pred             HHHHHhhhhccCCCccEEEeEecCCCcEEEEeccccchhhHHHHHHHHHH
Confidence            34555677999999999999998889999999865444345667777654

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]

Probab=97.00  E-value=0.0012  Score=49.87  Aligned_cols=38  Identities=29%  Similarity=0.534  Sum_probs=30.1

Q ss_pred             ccccceeecCCCcceEEEEeCC-CCEEEEEEecCCCCCC
Q 043043          106 FDRKLVMGKGAFGNVYRGTLRN-SMKVAVKRGETGSGQG  143 (154)
Q Consensus       106 f~~~~~iG~g~~g~vy~g~l~~-g~~vaVK~l~~~~~~~  143 (154)
                      +...+++|.|.||.||+|.+.+ +..||||+........
T Consensus        26 ~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r~k   64 (364)
T KOG0658|consen   26 YEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKRYK   64 (364)
T ss_pred             EEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCCcC
Confidence            4556899999999999999854 5789999996554443

>PF04478 Mid2: Mid2 like cell wall stress sensor; InterPro: IPR007567 This family represents a region near the C terminus of Mid2, which contains a transmembrane region

Probab=97.00  E-value=0.0003  Score=46.65  Aligned_cols=19  Identities=21%  Similarity=0.149  Sum_probs=11.3

Q ss_pred             ceeEEEehhHHHHHHHHHH
Q 043043           20 HFMAVVGSVLACSVLICIL   38 (154)
Q Consensus        20 ~~~~ii~~~v~~~vll~i~   38 (154)
                      .+-++||+++|+.+.++++
T Consensus        47 nknIVIGvVVGVGg~ill~   65 (154)
T PF04478_consen   47 NKNIVIGVVVGVGGPILLG   65 (154)
T ss_pred             CccEEEEEEecccHHHHHH
Confidence            4457788877755544433

The remainder of the protein sequence is serine-rich and of low complexity, and is therefore impossible to align accurately. Mid2 is thought to act as a mechanosensor of cell wall stress. The C-terminal cytoplasmic region of Mid2 is known to interact with Rom2, a guanine nucleotide exchange factor (GEF) for Rho1, which is part of the cell wall integrity signalling pathway [].

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=96.95  E-value=0.0015  Score=47.00  Aligned_cols=49  Identities=27%  Similarity=0.434  Sum_probs=37.7

Q ss_pred             cCccccceeecCCCcceEEEEeCCCCEEEEEEecCCCCCChHHHHHHHhh
Q 043043          104 HNFDRKLVMGKGAFGNVYRGTLRNSMKVAVKRGETGSGQGLPEFQTAIIV  153 (154)
Q Consensus       104 ~~f~~~~~iG~g~~g~vy~g~l~~g~~vaVK~l~~~~~~~~~~f~~e~~~  153 (154)
                      .+|...+.||+|++|.||++...++..||+|.+.... ....+|.+|+.+
T Consensus         6 ~~~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~-~~~~~~~~e~~~   54 (261)
T cd05068           6 TSIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGT-MDPKDFLAEAQI   54 (261)
T ss_pred             hheeeEEEecccCCccEEEEEecCCeEEEEEeeCCCc-ccHHHHHHHHHH
Confidence            3456668899999999999998777889999986432 235678888764

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=96.93  E-value=0.00098  Score=48.26  Aligned_cols=49  Identities=22%  Similarity=0.483  Sum_probs=35.3

Q ss_pred             CccccceeecCCCcceEEEEeC----CCCEEEEEEecCCC-CCChHHHHHHHhh
Q 043043          105 NFDRKLVMGKGAFGNVYRGTLR----NSMKVAVKRGETGS-GQGLPEFQTAIIV  153 (154)
Q Consensus       105 ~f~~~~~iG~g~~g~vy~g~l~----~g~~vaVK~l~~~~-~~~~~~f~~e~~~  153 (154)
                      +|.-.+.||+|+||.||+|.+.    .+..||+|.+.... ......|.+|+.+
T Consensus         6 ~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~   59 (266)
T cd05064           6 SIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALT   59 (266)
T ss_pred             HeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHH
Confidence            3555678999999999999863    35689999996432 2223568888765

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>PHA02988 hypothetical protein; Provisional

Probab=96.91  E-value=0.0028  Score=46.56  Aligned_cols=57  Identities=14%  Similarity=0.145  Sum_probs=40.0

Q ss_pred             ccccHHHHHHhhcCccccceeecCCCcceEEEEeCCCCEEEEEEecCCCCCC---hHHHHHHHhhC
Q 043043           92 LKIPYVEIKFATHNFDRKLVMGKGAFGNVYRGTLRNSMKVAVKRGETGSGQG---LPEFQTAIIVL  154 (154)
Q Consensus        92 ~~~~~~~l~~at~~f~~~~~iG~g~~g~vy~g~l~~g~~vaVK~l~~~~~~~---~~~f~~e~~~l  154 (154)
                      +.++.+++..     .....||+|+++.||+|.+ +|..||||.+.......   .+.|.+|+.+|
T Consensus        13 ~~i~~~~i~~-----~~~~~i~~g~~~~v~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l   72 (283)
T PHA02988         13 KCIESDDIDK-----YTSVLIKENDQNSIYKGIF-NNKEVIIRTFKKFHKGHKVLIDITENEIKNL   72 (283)
T ss_pred             eecCHHHcCC-----CCCeEEeeCCceEEEEEEE-CCEEEEEEeccccccccHHHHHHHHHHHHHH
Confidence            3455666632     3346799999999999999 57899999996433222   35677887653

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=96.91  E-value=0.002  Score=46.27  Aligned_cols=49  Identities=29%  Similarity=0.459  Sum_probs=37.6

Q ss_pred             cCccccceeecCCCcceEEEEeCCCCEEEEEEecCCCCCChHHHHHHHhh
Q 043043          104 HNFDRKLVMGKGAFGNVYRGTLRNSMKVAVKRGETGSGQGLPEFQTAIIV  153 (154)
Q Consensus       104 ~~f~~~~~iG~g~~g~vy~g~l~~g~~vaVK~l~~~~~~~~~~f~~e~~~  153 (154)
                      ++|...+.||+|++|.||++..+++..+++|.+.... ....+|.+|+.+
T Consensus         6 ~~~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~-~~~~~~~~e~~~   54 (261)
T cd05034           6 ESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGT-MSPEAFLQEAQI   54 (261)
T ss_pred             hheeeeeeeccCcceEEEEEEEcCCceEEEEEecCCc-cCHHHHHHHHHH
Confidence            3455567899999999999998888889999986432 234678888754

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=96.90  E-value=0.00067  Score=48.72  Aligned_cols=48  Identities=29%  Similarity=0.321  Sum_probs=35.6

Q ss_pred             ccccceeecCCCcceEEEEeC-CCCEEEEEEecC---CCCCChHHHHHHHhh
Q 043043          106 FDRKLVMGKGAFGNVYRGTLR-NSMKVAVKRGET---GSGQGLPEFQTAIIV  153 (154)
Q Consensus       106 f~~~~~iG~g~~g~vy~g~l~-~g~~vaVK~l~~---~~~~~~~~f~~e~~~  153 (154)
                      |.-.+.||+|.||.||.++-+ ++-.||+|.+..   ...+-..++.+|+++
T Consensus        24 feigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEI   75 (281)
T KOG0580|consen   24 FEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEI   75 (281)
T ss_pred             ccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEe
Confidence            555678999999999999985 456899999942   233345677777764

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=96.90  E-value=0.0011  Score=49.25  Aligned_cols=49  Identities=31%  Similarity=0.476  Sum_probs=34.8

Q ss_pred             CccccceeecCCCcceEEEEeC-CCC----EEEEEEecCCC-CCChHHHHHHHhh
Q 043043          105 NFDRKLVMGKGAFGNVYRGTLR-NSM----KVAVKRGETGS-GQGLPEFQTAIIV  153 (154)
Q Consensus       105 ~f~~~~~iG~g~~g~vy~g~l~-~g~----~vaVK~l~~~~-~~~~~~f~~e~~~  153 (154)
                      .|...+.||+|+||.||+|.+. ++.    .||+|.+.... .....+|.+|+.+
T Consensus         8 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~   62 (316)
T cd05108           8 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV   62 (316)
T ss_pred             hceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHH
Confidence            4677788999999999999863 333    48999986432 2234567777654

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=96.90  E-value=0.0016  Score=46.79  Aligned_cols=48  Identities=29%  Similarity=0.404  Sum_probs=36.3

Q ss_pred             ccccceeecCCCcceEEEEeCCCCEEEEEEecCCCCCChHHHHHHHhhC
Q 043043          106 FDRKLVMGKGAFGNVYRGTLRNSMKVAVKRGETGSGQGLPEFQTAIIVL  154 (154)
Q Consensus       106 f~~~~~iG~g~~g~vy~g~l~~g~~vaVK~l~~~~~~~~~~f~~e~~~l  154 (154)
                      |.....||+|+||.||++.+.++..+|+|.+... .....+|.+|+++|
T Consensus         6 ~~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~-~~~~~~~~~e~~~l   53 (256)
T cd05114           6 LTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEG-AMSEEDFIEEAKVM   53 (256)
T ss_pred             cEEeeEecCCcCceEEEEEeccCceEEEEecccC-CccHHHHHHHHHHH
Confidence            4445679999999999999988888999988532 23346788887653

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]

Probab=96.89  E-value=0.0013  Score=48.02  Aligned_cols=32  Identities=28%  Similarity=0.553  Sum_probs=26.4

Q ss_pred             ccceeecCCCcceEEEEe-CCCCEEEEEEecCC
Q 043043          108 RKLVMGKGAFGNVYRGTL-RNSMKVAVKRGETG  139 (154)
Q Consensus       108 ~~~~iG~g~~g~vy~g~l-~~g~~vaVK~l~~~  139 (154)
                      ....+|+|.||.||+|+= ..|+.||+|++...
T Consensus         6 ~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~   38 (318)
T KOG0659|consen    6 KLEKLGEGTYGVVYKARDTETGKRVAIKKIKLG   38 (318)
T ss_pred             hhhhhcCcceEEEEEEEecCCCcEEEEEEeecc
Confidence            346799999999999974 56889999999644

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=96.87  E-value=0.0014  Score=47.33  Aligned_cols=50  Identities=32%  Similarity=0.494  Sum_probs=36.1

Q ss_pred             cCccccceeecCCCcceEEEEeCC----CCEEEEEEecCCC-CCChHHHHHHHhh
Q 043043          104 HNFDRKLVMGKGAFGNVYRGTLRN----SMKVAVKRGETGS-GQGLPEFQTAIIV  153 (154)
Q Consensus       104 ~~f~~~~~iG~g~~g~vy~g~l~~----g~~vaVK~l~~~~-~~~~~~f~~e~~~  153 (154)
                      ++|...+.||+|+||.||+|....    ...||+|.+.... .....+|..|+.+
T Consensus         4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~   58 (266)
T cd05033           4 SYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASI   58 (266)
T ss_pred             HHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHH
Confidence            346667889999999999999843    3579999986432 2234568877754

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=96.86  E-value=0.0013  Score=48.49  Aligned_cols=49  Identities=27%  Similarity=0.323  Sum_probs=34.6

Q ss_pred             ccccceeecCCCcceEEEEeCC-----------------CCEEEEEEecCCC-CCChHHHHHHHhhC
Q 043043          106 FDRKLVMGKGAFGNVYRGTLRN-----------------SMKVAVKRGETGS-GQGLPEFQTAIIVL  154 (154)
Q Consensus       106 f~~~~~iG~g~~g~vy~g~l~~-----------------g~~vaVK~l~~~~-~~~~~~f~~e~~~l  154 (154)
                      +...+.||+|+||.||++..++                 +..||+|.+.... .....+|.+|+++|
T Consensus         7 ~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l   73 (304)
T cd05096           7 LLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKIL   73 (304)
T ss_pred             CeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHH
Confidence            4455789999999999998642                 2369999986432 22345788888653

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=96.85  E-value=0.00071  Score=50.76  Aligned_cols=50  Identities=24%  Similarity=0.356  Sum_probs=34.9

Q ss_pred             cCccccceeecCCCcceEEEEe------CCCCEEEEEEecCCCC-CChHHHHHHHhh
Q 043043          104 HNFDRKLVMGKGAFGNVYRGTL------RNSMKVAVKRGETGSG-QGLPEFQTAIIV  153 (154)
Q Consensus       104 ~~f~~~~~iG~g~~g~vy~g~l------~~g~~vaVK~l~~~~~-~~~~~f~~e~~~  153 (154)
                      ++|...+.||+|+||.||++..      ..+..||+|.+..... .....|.+|+.+
T Consensus         7 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~   63 (338)
T cd05102           7 DRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKI   63 (338)
T ss_pred             hHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHH
Confidence            3455567899999999999974      2346799999964322 223467778764

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=96.84  E-value=0.0013  Score=50.41  Aligned_cols=49  Identities=27%  Similarity=0.314  Sum_probs=34.6

Q ss_pred             CccccceeecCCCcceEEEEe------CCCCEEEEEEecCCC-CCChHHHHHHHhh
Q 043043          105 NFDRKLVMGKGAFGNVYRGTL------RNSMKVAVKRGETGS-GQGLPEFQTAIIV  153 (154)
Q Consensus       105 ~f~~~~~iG~g~~g~vy~g~l------~~g~~vaVK~l~~~~-~~~~~~f~~e~~~  153 (154)
                      +|...+.||+|+||.||++..      ..+..||||.+.... ......|.+|+.+
T Consensus        36 ~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~i   91 (375)
T cd05104          36 RLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKV   91 (375)
T ss_pred             HeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHH
Confidence            455568899999999999874      235689999996332 2233567778765

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=96.84  E-value=0.0014  Score=47.70  Aligned_cols=48  Identities=27%  Similarity=0.378  Sum_probs=35.6

Q ss_pred             ccccceeecCCCcceEEEEeC-----CCCEEEEEEecCCCCCChHHHHHHHhh
Q 043043          106 FDRKLVMGKGAFGNVYRGTLR-----NSMKVAVKRGETGSGQGLPEFQTAIIV  153 (154)
Q Consensus       106 f~~~~~iG~g~~g~vy~g~l~-----~g~~vaVK~l~~~~~~~~~~f~~e~~~  153 (154)
                      +.....||+|+||.||++...     ++..+++|.+..........|.+|+++
T Consensus         6 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~   58 (284)
T cd05081           6 LKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEI   58 (284)
T ss_pred             ceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHH
Confidence            445577999999999999853     467899999865444344567788764

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]

Probab=96.84  E-value=0.0012  Score=52.63  Aligned_cols=45  Identities=29%  Similarity=0.481  Sum_probs=36.3

Q ss_pred             ceeecCCCcceEEEEe-CCCCEEEEEEecCC--CCCChHHHHHHHhhC
Q 043043          110 LVMGKGAFGNVYRGTL-RNSMKVAVKRGETG--SGQGLPEFQTAIIVL  154 (154)
Q Consensus       110 ~~iG~g~~g~vy~g~l-~~g~~vaVK~l~~~--~~~~~~~f~~e~~~l  154 (154)
                      ++||+|.||+||-|.- ..|+.||||.++..  ...+..+..+|+.+|
T Consensus       570 evLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaIL  617 (888)
T KOG4236|consen  570 EVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAIL  617 (888)
T ss_pred             hhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHH
Confidence            5799999999999986 47899999999643  455567788888764

>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=96.82  E-value=0.00066  Score=55.07  Aligned_cols=50  Identities=30%  Similarity=0.503  Sum_probs=39.5

Q ss_pred             cCccccceeecCCCcceEEEEeCC-CCEEEEEEecCCCCCChHHHHHHHhhC
Q 043043          104 HNFDRKLVMGKGAFGNVYRGTLRN-SMKVAVKRGETGSGQGLPEFQTAIIVL  154 (154)
Q Consensus       104 ~~f~~~~~iG~g~~g~vy~g~l~~-g~~vaVK~l~~~~~~~~~~f~~e~~~l  154 (154)
                      ..+...++||-|.||+||.|+|.. ...||||.|... .....+|+.|+.+|
T Consensus       267 tdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKED-tMeveEFLkEAAvM  317 (1157)
T KOG4278|consen  267 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVM  317 (1157)
T ss_pred             hheeeeeccCCCcccceeeeeeeccceeeehhhhhhc-chhHHHHHHHHHHH
Confidence            445667899999999999999964 478999999633 34467899998765

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=96.81  E-value=0.0015  Score=47.27  Aligned_cols=51  Identities=24%  Similarity=0.403  Sum_probs=36.8

Q ss_pred             hhcCccccceeecCCCcceEEEEeC-CCCEEEEEEecCCCCCChHHHHHHHhh
Q 043043          102 ATHNFDRKLVMGKGAFGNVYRGTLR-NSMKVAVKRGETGSGQGLPEFQTAIIV  153 (154)
Q Consensus       102 at~~f~~~~~iG~g~~g~vy~g~l~-~g~~vaVK~l~~~~~~~~~~f~~e~~~  153 (154)
                      +++.|...+.||+|+||.||+|... .+..+|+|.+... .....++.+|+.+
T Consensus         4 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~-~~~~~~~~~e~~~   55 (272)
T cd06637           4 PAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVT-GDEEEEIKQEINM   55 (272)
T ss_pred             hhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcC-CccHHHHHHHHHH
Confidence            4455666678999999999999875 4678999998543 2334566676654

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=96.76  E-value=0.0013  Score=49.61  Aligned_cols=49  Identities=22%  Similarity=0.331  Sum_probs=34.5

Q ss_pred             CccccceeecCCCcceEEEEe------CCCCEEEEEEecCCC-CCChHHHHHHHhh
Q 043043          105 NFDRKLVMGKGAFGNVYRGTL------RNSMKVAVKRGETGS-GQGLPEFQTAIIV  153 (154)
Q Consensus       105 ~f~~~~~iG~g~~g~vy~g~l------~~g~~vaVK~l~~~~-~~~~~~f~~e~~~  153 (154)
                      +|.....||+|+||.||++..      ..+..||||.+.... ......+.+|+++
T Consensus         8 ~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~   63 (343)
T cd05103           8 RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKI   63 (343)
T ss_pred             HhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHH
Confidence            455567899999999999973      346789999996432 2223457777754

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=96.76  E-value=0.0036  Score=47.19  Aligned_cols=50  Identities=22%  Similarity=0.246  Sum_probs=35.8

Q ss_pred             cCccccceeecCCCcceEEEEe-CCCCEEEEEEecCC--CCCChHHHHHHHhh
Q 043043          104 HNFDRKLVMGKGAFGNVYRGTL-RNSMKVAVKRGETG--SGQGLPEFQTAIIV  153 (154)
Q Consensus       104 ~~f~~~~~iG~g~~g~vy~g~l-~~g~~vaVK~l~~~--~~~~~~~f~~e~~~  153 (154)
                      .+|...+.||+|+||.||+|.. .++..+|+|.+...  .......+.+|+.+
T Consensus        15 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~   67 (342)
T cd07879          15 ERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTL   67 (342)
T ss_pred             cceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHH
Confidence            5677778899999999999986 46789999998532  12122446666654

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>PF01102 Glycophorin_A: Glycophorin A; InterPro: IPR001195 Proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane

Probab=96.74  E-value=0.0012  Score=42.46  Aligned_cols=34  Identities=12%  Similarity=0.232  Sum_probs=16.7

Q ss_pred             ceeEEEehhHHHHHHHHHHHHHHHHHHHHhcCCC
Q 043043           20 HFMAVVGSVLACSVLICILEIVLSFVLIWRKQKP   53 (154)
Q Consensus        20 ~~~~ii~~~v~~~vll~i~~~~~~~~~~~r~~~~   53 (154)
                      ....|+++++|+++.+++++++++|+.||++++.
T Consensus        62 s~~~i~~Ii~gv~aGvIg~Illi~y~irR~~Kk~   95 (122)
T PF01102_consen   62 SEPAIIGIIFGVMAGVIGIILLISYCIRRLRKKS   95 (122)
T ss_dssp             S-TCHHHHHHHHHHHHHHHHHHHHHHHHHHS---
T ss_pred             cccceeehhHHHHHHHHHHHHHHHHHHHHHhccC
Confidence            4445666666666655544445555555555443

Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins [Reid M.E., Lomas-Francis C. The Blood Group Antigen FactsBook Academic Press, London / San Diego, (1997)]. Glycophorin A (PAS-2) and glycophorin B (PAS-3) belong to the MNS blood group system and are associated with antigens that include M/N, S/s, U, He, Mi(a), M(c), Vw, Mur, M(g), Vr, M(e), Mt(a), St(a), Ri(a), Cl(a), Ny(a), Hut, Hil, M(v), Far, Mit, Dantu, Hop, Nob, En(a), ENKT, amongst others. Glycophorin A is the major sialoglycoprotein of the erythrocyte membrane []. Structurally, glycophorin A consists of an N-terminal extracellular domain, heavily glycosylated on serine and threonine residues, followed by a transmembrane region and a C-terminal cytoplasmic domain. Other glycophorins in this entry such as Glycophorin B and Glycophorin E represent minor sialoglycoproteins in the erythrocyte membrane.; GO: 0016021 integral to membrane; PDB: 2KPF_B 1AFO_B 2KPE_A.

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=96.74  E-value=0.003  Score=45.44  Aligned_cols=46  Identities=30%  Similarity=0.432  Sum_probs=35.6

Q ss_pred             cccceeecCCCcceEEEEeCCCCEEEEEEecCCCCCChHHHHHHHhh
Q 043043          107 DRKLVMGKGAFGNVYRGTLRNSMKVAVKRGETGSGQGLPEFQTAIIV  153 (154)
Q Consensus       107 ~~~~~iG~g~~g~vy~g~l~~g~~vaVK~l~~~~~~~~~~f~~e~~~  153 (154)
                      .-.+.||+|++|.||++..+++..+++|.+..... ...+|.+|+.+
T Consensus         9 ~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~-~~~~~~~E~~~   54 (260)
T cd05070           9 QLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTM-SPESFLEEAQI   54 (260)
T ss_pred             hhhheeccccCceEEEEEecCCceeEEEEecCCCC-CHHHHHHHHHH
Confidence            33467999999999999988888899999864322 34578888764

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>PTZ00284 protein kinase; Provisional

Probab=96.74  E-value=0.0016  Score=51.38  Aligned_cols=41  Identities=29%  Similarity=0.393  Sum_probs=32.8

Q ss_pred             HHHHhhcCccccceeecCCCcceEEEEeC-CCCEEEEEEecC
Q 043043           98 EIKFATHNFDRKLVMGKGAFGNVYRGTLR-NSMKVAVKRGET  138 (154)
Q Consensus        98 ~l~~at~~f~~~~~iG~g~~g~vy~g~l~-~g~~vaVK~l~~  138 (154)
                      ++...+.+|...++||+|+||.||++... .+..||||.+..
T Consensus       123 ~~~~~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~  164 (467)
T PTZ00284        123 DIDVSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRN  164 (467)
T ss_pred             ccccCCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEec
Confidence            34445677888889999999999999864 567899999853

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=96.71  E-value=0.0032  Score=45.22  Aligned_cols=50  Identities=24%  Similarity=0.316  Sum_probs=37.2

Q ss_pred             cCccccceeecCCCcceEEEEeC-CCCEEEEEEecCC---CCCChHHHHHHHhh
Q 043043          104 HNFDRKLVMGKGAFGNVYRGTLR-NSMKVAVKRGETG---SGQGLPEFQTAIIV  153 (154)
Q Consensus       104 ~~f~~~~~iG~g~~g~vy~g~l~-~g~~vaVK~l~~~---~~~~~~~f~~e~~~  153 (154)
                      ++|...+.||+|++|.||++... +|..+++|.+...   .......+.+|+++
T Consensus         2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~   55 (267)
T cd08224           2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDL   55 (267)
T ss_pred             CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHH
Confidence            35666788999999999999986 7889999988521   22234567788764

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>PF12877 DUF3827: Domain of unknown function (DUF3827); InterPro: IPR024606 The function of the proteins in this entry is not currently known, but one of the human proteins (Q9HCM3 from SWISSPROT) has been implicated in pilocytic astrocytomas [, , ]

Probab=96.70  E-value=0.0028  Score=51.12  Aligned_cols=39  Identities=13%  Similarity=0.128  Sum_probs=28.1

Q ss_pred             ccCCCCCcceeEEEehhHHHHHHHHHHHHHHHHHHHHhc
Q 043043           12 VVNGPKKKHFMAVVGSVLACSVLICILEIVLSFVLIWRK   50 (154)
Q Consensus        12 ~~~~~~~~~~~~ii~~~v~~~vll~i~~~~~~~~~~~r~   50 (154)
                      ++....+...|+|+|+++.++++++|++++.+++||+.|
T Consensus       260 P~~~s~~~NlWII~gVlvPv~vV~~Iiiil~~~LCRk~K  298 (684)
T PF12877_consen  260 PPAKSPPNNLWIIAGVLVPVLVVLLIIIILYWKLCRKNK  298 (684)
T ss_pred             CCCCCCCCCeEEEehHhHHHHHHHHHHHHHHHHHhcccc
Confidence            444566788999999988888777777666666665543

In the majority of cases of pilocytic astrocytomas a tandem duplication produces an in-frame fusion of the gene encoding this protein and the BRAF oncogene. The resulting fusion protein has constitutive BRAF kinase activity and is capable of transforming cells.

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=96.70  E-value=0.0036  Score=45.10  Aligned_cols=48  Identities=23%  Similarity=0.398  Sum_probs=34.8

Q ss_pred             ccccceeecCCCcceEEEEe-CCCCEEEEEEecCCCCCChHHHHHHHhh
Q 043043          106 FDRKLVMGKGAFGNVYRGTL-RNSMKVAVKRGETGSGQGLPEFQTAIIV  153 (154)
Q Consensus       106 f~~~~~iG~g~~g~vy~g~l-~~g~~vaVK~l~~~~~~~~~~f~~e~~~  153 (154)
                      +.....||+|+||.||+|.. .++..+|+|.+..........+.+|+.+
T Consensus        11 y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~   59 (267)
T cd06646          11 YELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFM   59 (267)
T ss_pred             cchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHH
Confidence            44457799999999999986 5678899999864433334456667654

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=96.69  E-value=0.0012  Score=47.97  Aligned_cols=50  Identities=16%  Similarity=0.242  Sum_probs=36.3

Q ss_pred             cCccccceeecCCCcceEEEEeCC-----CCEEEEEEecCCC-CCChHHHHHHHhh
Q 043043          104 HNFDRKLVMGKGAFGNVYRGTLRN-----SMKVAVKRGETGS-GQGLPEFQTAIIV  153 (154)
Q Consensus       104 ~~f~~~~~iG~g~~g~vy~g~l~~-----g~~vaVK~l~~~~-~~~~~~f~~e~~~  153 (154)
                      .+|...++||+|+||.||+|...+     +..|++|.+.... ......+.+|+.+
T Consensus         6 ~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~   61 (280)
T cd05043           6 DRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCL   61 (280)
T ss_pred             hheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHH
Confidence            456667889999999999999865     6789999985432 2223557777654

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=96.67  E-value=0.0026  Score=45.71  Aligned_cols=47  Identities=32%  Similarity=0.461  Sum_probs=35.9

Q ss_pred             ccccceeecCCCcceEEEEeCCCCEEEEEEecCCCCCChHHHHHHHhh
Q 043043          106 FDRKLVMGKGAFGNVYRGTLRNSMKVAVKRGETGSGQGLPEFQTAIIV  153 (154)
Q Consensus       106 f~~~~~iG~g~~g~vy~g~l~~g~~vaVK~l~~~~~~~~~~f~~e~~~  153 (154)
                      |.....||+|++|.||++...++..+++|.+.... .....|.+|+.+
T Consensus         8 ~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~-~~~~~~~~e~~~   54 (261)
T cd05072           8 IKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGT-MSVQAFLEEANL   54 (261)
T ss_pred             eEEeeecCCcCCceEEEEEecCCceEEEEEccCCc-hhHHHHHHHHHH
Confidence            45557799999999999999888899999985432 234567777754

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=96.65  E-value=0.0018  Score=49.03  Aligned_cols=46  Identities=24%  Similarity=0.159  Sum_probs=33.6

Q ss_pred             cceeecCCCcceEEEEeC-CCCEEEEEEecCCC-CCChHHHHHHHhhC
Q 043043          109 KLVMGKGAFGNVYRGTLR-NSMKVAVKRGETGS-GQGLPEFQTAIIVL  154 (154)
Q Consensus       109 ~~~iG~g~~g~vy~g~l~-~g~~vaVK~l~~~~-~~~~~~f~~e~~~l  154 (154)
                      .+.||+|+||.||++... ++..||+|.+.... ......|.+|+++|
T Consensus        79 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l  126 (353)
T PLN00034         79 VNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEIL  126 (353)
T ss_pred             hhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHH
Confidence            367999999999999864 67899999985322 22235677887653

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=96.65  E-value=0.0035  Score=44.89  Aligned_cols=47  Identities=34%  Similarity=0.445  Sum_probs=35.9

Q ss_pred             CccccceeecCCCcceEEEEeCCCCEEEEEEecCCCCCChHHHHHHHhh
Q 043043          105 NFDRKLVMGKGAFGNVYRGTLRNSMKVAVKRGETGSGQGLPEFQTAIIV  153 (154)
Q Consensus       105 ~f~~~~~iG~g~~g~vy~g~l~~g~~vaVK~l~~~~~~~~~~f~~e~~~  153 (154)
                      +|...+.||.|.+|.||++... +..|++|.+..... ...+|.+|+.+
T Consensus         7 ~~~~~~~ig~g~~g~v~~~~~~-~~~v~iK~~~~~~~-~~~~~~~e~~~   53 (256)
T cd05039           7 ELKLGATIGKGEFGDVMLGDYR-GQKVAVKCLKDDST-AAQAFLAEASV   53 (256)
T ss_pred             hccceeeeecCCCceEEEEEec-CcEEEEEEeccchh-HHHHHHHHHHH
Confidence            3555678999999999999875 68899999964433 45678888754

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=96.62  E-value=0.0034  Score=45.30  Aligned_cols=47  Identities=28%  Similarity=0.489  Sum_probs=35.4

Q ss_pred             ccccceeecCCCcceEEEEeCCCCEEEEEEecCCCCCChHHHHHHHhh
Q 043043          106 FDRKLVMGKGAFGNVYRGTLRNSMKVAVKRGETGSGQGLPEFQTAIIV  153 (154)
Q Consensus       106 f~~~~~iG~g~~g~vy~g~l~~g~~vaVK~l~~~~~~~~~~f~~e~~~  153 (154)
                      |.-...||+|+||.||++...+...||+|.+... .....+|.+|+++
T Consensus         8 ~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~-~~~~~~~~~E~~~   54 (262)
T cd05071           8 LRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPG-TMSPEAFLQEAQV   54 (262)
T ss_pred             eeEeeecCCCCCCcEEEEEecCCceEEEEecccC-ccCHHHHHHHHHH
Confidence            4445679999999999999877778999999642 2234578888764

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=96.60  E-value=0.0038  Score=47.16  Aligned_cols=60  Identities=18%  Similarity=0.143  Sum_probs=43.6

Q ss_pred             ccHHHHHHhhcCccccceeecCCCcceEEEEe-CCCCEEEEEEecCC--CCCChHHHHHHHhh
Q 043043           94 IPYVEIKFATHNFDRKLVMGKGAFGNVYRGTL-RNSMKVAVKRGETG--SGQGLPEFQTAIIV  153 (154)
Q Consensus        94 ~~~~~l~~at~~f~~~~~iG~g~~g~vy~g~l-~~g~~vaVK~l~~~--~~~~~~~f~~e~~~  153 (154)
                      ....++...+.+|.....||+|+||.||++.. .++..||+|++...  .......+.+|+++
T Consensus         7 ~~~~~~~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~   69 (345)
T cd07877           7 ELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL   69 (345)
T ss_pred             hHHHHHhhccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHH
Confidence            34456667778888888999999999999975 46789999998532  12223456667654

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=96.59  E-value=0.0019  Score=46.88  Aligned_cols=49  Identities=29%  Similarity=0.388  Sum_probs=35.4

Q ss_pred             ccccceeecCCCcceEEEEeCC------CCEEEEEEecCCCCC-ChHHHHHHHhhC
Q 043043          106 FDRKLVMGKGAFGNVYRGTLRN------SMKVAVKRGETGSGQ-GLPEFQTAIIVL  154 (154)
Q Consensus       106 f~~~~~iG~g~~g~vy~g~l~~------g~~vaVK~l~~~~~~-~~~~f~~e~~~l  154 (154)
                      |...+.||+|+||.||++...+      +..+|+|.+...... ...+|.+|+++|
T Consensus         7 ~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l   62 (280)
T cd05049           7 IVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELL   62 (280)
T ss_pred             hhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHH
Confidence            4445779999999999998743      368999998644332 346788887653

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=96.59  E-value=0.0028  Score=49.05  Aligned_cols=48  Identities=25%  Similarity=0.473  Sum_probs=33.7

Q ss_pred             ccccceeecCCCcceEEEEeC-CCCEEEEEEecCCCCC-ChHHHHHHHhh
Q 043043          106 FDRKLVMGKGAFGNVYRGTLR-NSMKVAVKRGETGSGQ-GLPEFQTAIIV  153 (154)
Q Consensus       106 f~~~~~iG~g~~g~vy~g~l~-~g~~vaVK~l~~~~~~-~~~~f~~e~~~  153 (154)
                      |.....||+|.||.||+|... .+..||+|.++.+... ...+..+|+.+
T Consensus        15 ~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~   64 (467)
T KOG0201|consen   15 YTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISV   64 (467)
T ss_pred             cccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHH
Confidence            344467999999999999974 3578999999754333 33455566543

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=96.58  E-value=0.0032  Score=48.80  Aligned_cols=51  Identities=27%  Similarity=0.387  Sum_probs=35.6

Q ss_pred             cCccccceeecCCCcceEEEEeC------CCCEEEEEEecCCC-CCChHHHHHHHhhC
Q 043043          104 HNFDRKLVMGKGAFGNVYRGTLR------NSMKVAVKRGETGS-GQGLPEFQTAIIVL  154 (154)
Q Consensus       104 ~~f~~~~~iG~g~~g~vy~g~l~------~g~~vaVK~l~~~~-~~~~~~f~~e~~~l  154 (154)
                      ..|...++||+|+||.||+|...      .+..||||++.... ......|.+|+++|
T Consensus        37 ~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l   94 (400)
T cd05105          37 DGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIM   94 (400)
T ss_pred             cceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHH
Confidence            44555678999999999999852      13469999996432 22345688888653

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=96.57  E-value=0.0054  Score=45.29  Aligned_cols=50  Identities=18%  Similarity=0.267  Sum_probs=35.6

Q ss_pred             cCccccceeecCCCcceEEEEeC-CCCEEEEEEecCCC-CCChHHHHHHHhh
Q 043043          104 HNFDRKLVMGKGAFGNVYRGTLR-NSMKVAVKRGETGS-GQGLPEFQTAIIV  153 (154)
Q Consensus       104 ~~f~~~~~iG~g~~g~vy~g~l~-~g~~vaVK~l~~~~-~~~~~~f~~e~~~  153 (154)
                      .+|...+.||+|+||.||++.-. ++..+|+|.+.... ......+.+|+.+
T Consensus         5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~   56 (303)
T cd07869           5 DSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASL   56 (303)
T ss_pred             ccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHH
Confidence            34555678999999999999875 67899999985332 2223456667654

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=96.53  E-value=0.0035  Score=45.10  Aligned_cols=48  Identities=31%  Similarity=0.460  Sum_probs=36.5

Q ss_pred             CccccceeecCCCcceEEEEeCCCCEEEEEEecCCCCCChHHHHHHHhh
Q 043043          105 NFDRKLVMGKGAFGNVYRGTLRNSMKVAVKRGETGSGQGLPEFQTAIIV  153 (154)
Q Consensus       105 ~f~~~~~iG~g~~g~vy~g~l~~g~~vaVK~l~~~~~~~~~~f~~e~~~  153 (154)
                      .+...+.||+|+||.||++...++..+++|.+.... .....|.+|+++
T Consensus         7 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~~-~~~~~~~~e~~~   54 (260)
T cd05073           7 SLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANV   54 (260)
T ss_pred             ceeEEeEecCccceEEEEEEecCCccEEEEecCCCh-hHHHHHHHHHHH
Confidence            455667899999999999998777889999885332 234568888764

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=96.51  E-value=0.0028  Score=49.22  Aligned_cols=49  Identities=27%  Similarity=0.377  Sum_probs=34.5

Q ss_pred             ccccceeecCCCcceEEEEeC------CCCEEEEEEecCCCCC-ChHHHHHHHhhC
Q 043043          106 FDRKLVMGKGAFGNVYRGTLR------NSMKVAVKRGETGSGQ-GLPEFQTAIIVL  154 (154)
Q Consensus       106 f~~~~~iG~g~~g~vy~g~l~------~g~~vaVK~l~~~~~~-~~~~f~~e~~~l  154 (154)
                      +.....||+|+||.||++...      .+..||+|++...... ....|.+|+++|
T Consensus        39 ~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l   94 (401)
T cd05107          39 LVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIM   94 (401)
T ss_pred             eehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHH
Confidence            444577999999999999864      2357999999643222 234677887653

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]

Probab=96.50  E-value=0.0029  Score=47.11  Aligned_cols=28  Identities=25%  Similarity=0.351  Sum_probs=24.2

Q ss_pred             ceeecCCCcceEEEEeC-CCCEEEEEEec
Q 043043          110 LVMGKGAFGNVYRGTLR-NSMKVAVKRGE  137 (154)
Q Consensus       110 ~~iG~g~~g~vy~g~l~-~g~~vaVK~l~  137 (154)
                      -++|+|+||.|||++=+ .|+.||||++-
T Consensus         8 gkvGEGSYGvV~KCrnk~TgqIVAIKkF~   36 (396)
T KOG0593|consen    8 GKVGEGSYGVVMKCRNKDTGQIVAIKKFV   36 (396)
T ss_pred             hccccCcceEEEEeccCCcccEEEEEeec
Confidence            45899999999999875 48899999993

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=96.49  E-value=0.0054  Score=43.88  Aligned_cols=47  Identities=28%  Similarity=0.354  Sum_probs=35.8

Q ss_pred             ccccceeecCCCcceEEEEeCCCCEEEEEEecCCCCCChHHHHHHHhh
Q 043043          106 FDRKLVMGKGAFGNVYRGTLRNSMKVAVKRGETGSGQGLPEFQTAIIV  153 (154)
Q Consensus       106 f~~~~~iG~g~~g~vy~g~l~~g~~vaVK~l~~~~~~~~~~f~~e~~~  153 (154)
                      |.....||.|++|.||++...++..+++|.+... .....+|.+|+++
T Consensus         6 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~-~~~~~~~~~e~~~   52 (256)
T cd05112           6 LTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREG-AMSEEDFIEEAQV   52 (256)
T ss_pred             eEEEeeecCcccceEEEEEEeCCCeEEEEECCCC-CCCHHHHHHHHHH
Confidence            4445779999999999999877788999988533 2234578888764

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=96.48  E-value=0.0028  Score=50.57  Aligned_cols=51  Identities=20%  Similarity=0.189  Sum_probs=36.5

Q ss_pred             hcCccccceeecCCCcceEEEEe-CCCCEEEEEEecCCC--CCChHHHHHHHhh
Q 043043          103 THNFDRKLVMGKGAFGNVYRGTL-RNSMKVAVKRGETGS--GQGLPEFQTAIIV  153 (154)
Q Consensus       103 t~~f~~~~~iG~g~~g~vy~g~l-~~g~~vaVK~l~~~~--~~~~~~f~~e~~~  153 (154)
                      ..+|...+.||+|+||.||++.. .++..||+|.+....  ......+.+|+..
T Consensus        31 ~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~   84 (496)
T PTZ00283         31 AKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCC   84 (496)
T ss_pred             CCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHH
Confidence            35666678899999999999975 568999999985432  2223456666643

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=96.47  E-value=0.0071  Score=44.35  Aligned_cols=48  Identities=15%  Similarity=0.226  Sum_probs=34.4

Q ss_pred             ccccceeecCCCcceEEEEeC-CCCEEEEEEecCCC-CCChHHHHHHHhh
Q 043043          106 FDRKLVMGKGAFGNVYRGTLR-NSMKVAVKRGETGS-GQGLPEFQTAIIV  153 (154)
Q Consensus       106 f~~~~~iG~g~~g~vy~g~l~-~g~~vaVK~l~~~~-~~~~~~f~~e~~~  153 (154)
                      |...+.||.|+||.||++.-. ++..||+|.+.... ......+.+|+.+
T Consensus         7 y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~   56 (288)
T cd07871           7 YVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSL   56 (288)
T ss_pred             ceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHH
Confidence            455678999999999999874 57889999985332 2233456677654

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=96.45  E-value=0.0032  Score=45.89  Aligned_cols=59  Identities=20%  Similarity=0.253  Sum_probs=42.7

Q ss_pred             ccHHHHHHhhcCccccceeecCCCcceEEEEeC-CCCEEEEEEecCCCCCChHHHHHHHhh
Q 043043           94 IPYVEIKFATHNFDRKLVMGKGAFGNVYRGTLR-NSMKVAVKRGETGSGQGLPEFQTAIIV  153 (154)
Q Consensus        94 ~~~~~l~~at~~f~~~~~iG~g~~g~vy~g~l~-~g~~vaVK~l~~~~~~~~~~f~~e~~~  153 (154)
                      +.++.+..++++|.....||+|+||.||++... ++..+++|.+.... ....++..|+.+
T Consensus         8 ~~~~~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~-~~~~~~~~e~~~   67 (286)
T cd06638           8 IIFDSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIH-DIDEEIEAEYNI   67 (286)
T ss_pred             EEeecCCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeecccc-chHHHHHHHHHH
Confidence            445666777788888889999999999999874 56889999885422 223456666543

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=96.42  E-value=0.0037  Score=45.73  Aligned_cols=58  Identities=22%  Similarity=0.242  Sum_probs=43.2

Q ss_pred             ccHHHHHHhhcCccccceeecCCCcceEEEEe-CCCCEEEEEEecCCCCCChHHHHHHHh
Q 043043           94 IPYVEIKFATHNFDRKLVMGKGAFGNVYRGTL-RNSMKVAVKRGETGSGQGLPEFQTAII  152 (154)
Q Consensus        94 ~~~~~l~~at~~f~~~~~iG~g~~g~vy~g~l-~~g~~vaVK~l~~~~~~~~~~f~~e~~  152 (154)
                      +++.++..++++|...+.||+|.||.||++.. .++..+|+|.+..... ...++.+|+.
T Consensus        12 ~~~~~~~~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~~-~~~~~~~e~~   70 (291)
T cd06639          12 LGLESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPISD-VDEEIEAEYN   70 (291)
T ss_pred             hhcccCCCCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEeccccc-HHHHHHHHHH
Confidence            56677778888999889999999999999987 4678899999853221 1234555553

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=96.40  E-value=0.0073  Score=45.51  Aligned_cols=50  Identities=20%  Similarity=0.175  Sum_probs=37.6

Q ss_pred             cCccccceeecCCCcceEEEEe-CCCCEEEEEEecCCCCCChHHHHHHHhh
Q 043043          104 HNFDRKLVMGKGAFGNVYRGTL-RNSMKVAVKRGETGSGQGLPEFQTAIIV  153 (154)
Q Consensus       104 ~~f~~~~~iG~g~~g~vy~g~l-~~g~~vaVK~l~~~~~~~~~~f~~e~~~  153 (154)
                      .+|...+.||.|+||.||++.- .++..|++|.+........+.+.+|+++
T Consensus         5 ~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~   55 (342)
T cd07854           5 SRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKI   55 (342)
T ss_pred             cceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHH
Confidence            3466667899999999999986 4578999999865444445667777754

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=96.40  E-value=0.0068  Score=44.89  Aligned_cols=48  Identities=15%  Similarity=0.228  Sum_probs=34.2

Q ss_pred             ccccceeecCCCcceEEEEeC-CCCEEEEEEecCCC-CCChHHHHHHHhh
Q 043043          106 FDRKLVMGKGAFGNVYRGTLR-NSMKVAVKRGETGS-GQGLPEFQTAIIV  153 (154)
Q Consensus       106 f~~~~~iG~g~~g~vy~g~l~-~g~~vaVK~l~~~~-~~~~~~f~~e~~~  153 (154)
                      |...+.||+|+||.||++... .+..+|+|.+.... ......+.+|+++
T Consensus         8 y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~   57 (309)
T cd07872           8 YIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSL   57 (309)
T ss_pred             eEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHH
Confidence            455577999999999999875 56789999986432 2223456667654

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=96.39  E-value=0.0033  Score=48.15  Aligned_cols=50  Identities=26%  Similarity=0.379  Sum_probs=34.7

Q ss_pred             cCccccceeecCCCcceEEEEe------CCCCEEEEEEecCCCCC-ChHHHHHHHhh
Q 043043          104 HNFDRKLVMGKGAFGNVYRGTL------RNSMKVAVKRGETGSGQ-GLPEFQTAIIV  153 (154)
Q Consensus       104 ~~f~~~~~iG~g~~g~vy~g~l------~~g~~vaVK~l~~~~~~-~~~~f~~e~~~  153 (154)
                      .+|...+.||+|+||.||++..      .++..||+|++...... ....+.+|+++
T Consensus        38 ~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~i   94 (374)
T cd05106          38 DNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKI   94 (374)
T ss_pred             HHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHH
Confidence            3466668899999999999874      23457999999643222 23457777764

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=96.39  E-value=0.0054  Score=44.12  Aligned_cols=45  Identities=31%  Similarity=0.358  Sum_probs=34.6

Q ss_pred             ccceeecCCCcceEEEEeCCCCEEEEEEecCCCCCChHHHHHHHhh
Q 043043          108 RKLVMGKGAFGNVYRGTLRNSMKVAVKRGETGSGQGLPEFQTAIIV  153 (154)
Q Consensus       108 ~~~~iG~g~~g~vy~g~l~~g~~vaVK~l~~~~~~~~~~f~~e~~~  153 (154)
                      ....||+|++|.||++...++..+|+|.+... .....+|.+|+.+
T Consensus         8 ~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~-~~~~~~~~~e~~~   52 (256)
T cd05113           8 FLKELGTGQFGVVKYGKWRGQYDVAIKMIKEG-SMSEDEFIEEAKV   52 (256)
T ss_pred             EeeEecCcccceEEEEEecCCCcEEEEEcCCC-cccHHHHHHHHHH
Confidence            34569999999999999877777999988633 2335678888765

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=96.38  E-value=0.0082  Score=44.05  Aligned_cols=51  Identities=22%  Similarity=0.270  Sum_probs=36.6

Q ss_pred             hcCccccceeecCCCcceEEEEeC-CCCEEEEEEecCCC--CCChHHHHHHHhh
Q 043043          103 THNFDRKLVMGKGAFGNVYRGTLR-NSMKVAVKRGETGS--GQGLPEFQTAIIV  153 (154)
Q Consensus       103 t~~f~~~~~iG~g~~g~vy~g~l~-~g~~vaVK~l~~~~--~~~~~~f~~e~~~  153 (154)
                      ..+|...+.||+|.+|.||+|... ++..+++|.+....  ......+.+|+++
T Consensus         6 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~   59 (302)
T cd07864           6 VDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKI   59 (302)
T ss_pred             hhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHH
Confidence            355677788999999999999985 57899999995432  2223456666643

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=96.38  E-value=0.0089  Score=43.02  Aligned_cols=49  Identities=27%  Similarity=0.393  Sum_probs=35.5

Q ss_pred             CccccceeecCCCcceEEEEeC-CCCEEEEEEecCC---CCCChHHHHHHHhh
Q 043043          105 NFDRKLVMGKGAFGNVYRGTLR-NSMKVAVKRGETG---SGQGLPEFQTAIIV  153 (154)
Q Consensus       105 ~f~~~~~iG~g~~g~vy~g~l~-~g~~vaVK~l~~~---~~~~~~~f~~e~~~  153 (154)
                      +|.....||+|.||.||++... ++..+|+|.+...   .......|.+|+++
T Consensus         3 ~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~   55 (267)
T cd08228           3 NFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDL   55 (267)
T ss_pred             ceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHH
Confidence            4556678999999999999874 6789999988532   12223467777764

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=96.36  E-value=0.0072  Score=44.56  Aligned_cols=50  Identities=24%  Similarity=0.306  Sum_probs=36.6

Q ss_pred             cCccccceeecCCCcceEEEEe-CCCCEEEEEEecCCCCCChHHHHHHHhh
Q 043043          104 HNFDRKLVMGKGAFGNVYRGTL-RNSMKVAVKRGETGSGQGLPEFQTAIIV  153 (154)
Q Consensus       104 ~~f~~~~~iG~g~~g~vy~g~l-~~g~~vaVK~l~~~~~~~~~~f~~e~~~  153 (154)
                      .+|...+.||.|.+|.||++.- .++..||+|.+..........+.+|+.+
T Consensus        19 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~   69 (297)
T cd06656          19 KKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILV   69 (297)
T ss_pred             hhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHH
Confidence            3455567899999999999985 5688999999964433334556677653

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=96.34  E-value=0.0074  Score=48.41  Aligned_cols=48  Identities=23%  Similarity=0.297  Sum_probs=38.1

Q ss_pred             ccccceeecCCCcceEEEEe-CCCCEEEEEEecC---CCCCChHHHHHHHhh
Q 043043          106 FDRKLVMGKGAFGNVYRGTL-RNSMKVAVKRGET---GSGQGLPEFQTAIIV  153 (154)
Q Consensus       106 f~~~~~iG~g~~g~vy~g~l-~~g~~vaVK~l~~---~~~~~~~~f~~e~~~  153 (154)
                      +...++||+|+|+.||.++- ..|..+|+|.+..   ......+...+|+++
T Consensus        20 Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeI   71 (592)
T KOG0575|consen   20 YKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEI   71 (592)
T ss_pred             eeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHH
Confidence            55568899999999999987 8899999999953   234445678888876

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=96.33  E-value=0.0047  Score=44.56  Aligned_cols=50  Identities=28%  Similarity=0.557  Sum_probs=35.7

Q ss_pred             cCccccceeecCCCcceEEEEeCC-C---CEEEEEEecCCC-CCChHHHHHHHhh
Q 043043          104 HNFDRKLVMGKGAFGNVYRGTLRN-S---MKVAVKRGETGS-GQGLPEFQTAIIV  153 (154)
Q Consensus       104 ~~f~~~~~iG~g~~g~vy~g~l~~-g---~~vaVK~l~~~~-~~~~~~f~~e~~~  153 (154)
                      .+|+..+.||+|++|.||++.... +   ..+++|.+.... .....+|..|+++
T Consensus         5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~   59 (268)
T cd05063           5 SHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASI   59 (268)
T ss_pred             HHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHH
Confidence            356777899999999999999852 2   368999985432 2224567777754

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=96.32  E-value=0.0054  Score=44.69  Aligned_cols=48  Identities=29%  Similarity=0.391  Sum_probs=33.7

Q ss_pred             ccccceeecCCCcceEEEEe-----CCCCEEEEEEecCCCC-CChHHHHHHHhh
Q 043043          106 FDRKLVMGKGAFGNVYRGTL-----RNSMKVAVKRGETGSG-QGLPEFQTAIIV  153 (154)
Q Consensus       106 f~~~~~iG~g~~g~vy~g~l-----~~g~~vaVK~l~~~~~-~~~~~f~~e~~~  153 (154)
                      |.-...||+|+||.||+|..     ..+..+++|.+..... ....+|.+|+++
T Consensus         7 ~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~   60 (283)
T cd05090           7 VRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASL   60 (283)
T ss_pred             ceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHH
Confidence            34446799999999999985     2457899999964322 223567777764

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=96.29  E-value=0.009  Score=43.69  Aligned_cols=51  Identities=20%  Similarity=0.210  Sum_probs=36.1

Q ss_pred             hcCccccceeecCCCcceEEEEeC-CCCEEEEEEecCCC-CCChHHHHHHHhh
Q 043043          103 THNFDRKLVMGKGAFGNVYRGTLR-NSMKVAVKRGETGS-GQGLPEFQTAIIV  153 (154)
Q Consensus       103 t~~f~~~~~iG~g~~g~vy~g~l~-~g~~vaVK~l~~~~-~~~~~~f~~e~~~  153 (154)
                      +.+|.....||+|+||.||+|... ++..+++|.+.... ......+.+|+.+
T Consensus         4 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~   56 (291)
T cd07870           4 ATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASL   56 (291)
T ss_pred             cceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHH
Confidence            355666788999999999999864 57899999985432 2222356666643

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=96.28  E-value=0.0067  Score=43.99  Aligned_cols=47  Identities=23%  Similarity=0.294  Sum_probs=34.3

Q ss_pred             cccceeecCCCcceEEEEeC-----CCCEEEEEEecCCCCC-ChHHHHHHHhh
Q 043043          107 DRKLVMGKGAFGNVYRGTLR-----NSMKVAVKRGETGSGQ-GLPEFQTAIIV  153 (154)
Q Consensus       107 ~~~~~iG~g~~g~vy~g~l~-----~g~~vaVK~l~~~~~~-~~~~f~~e~~~  153 (154)
                      ...+.||+|+||.||++.+.     .+..+|||.+...... ...+|.+|+++
T Consensus         7 ~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~   59 (284)
T cd05038           7 KFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEI   59 (284)
T ss_pred             hhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHH
Confidence            33467999999999999874     3578999999643332 34578888754

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=96.25  E-value=0.0065  Score=45.59  Aligned_cols=49  Identities=16%  Similarity=0.235  Sum_probs=35.3

Q ss_pred             CccccceeecCCCcceEEEEeC-CCCEEEEEEecCC---CCCChHHHHHHHhh
Q 043043          105 NFDRKLVMGKGAFGNVYRGTLR-NSMKVAVKRGETG---SGQGLPEFQTAIIV  153 (154)
Q Consensus       105 ~f~~~~~iG~g~~g~vy~g~l~-~g~~vaVK~l~~~---~~~~~~~f~~e~~~  153 (154)
                      +|...+.||+|+||.||++... ++..+|+|.+...   .......+.+|+.+
T Consensus        19 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~   71 (329)
T PTZ00263         19 DFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSI   71 (329)
T ss_pred             heEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHH
Confidence            3555678999999999999885 5788999998532   22233557777654

>PTZ00036 glycogen synthase kinase; Provisional

Probab=96.25  E-value=0.0068  Score=47.55  Aligned_cols=35  Identities=31%  Similarity=0.511  Sum_probs=29.2

Q ss_pred             hcCccccceeecCCCcceEEEEeC-CCCEEEEEEec
Q 043043          103 THNFDRKLVMGKGAFGNVYRGTLR-NSMKVAVKRGE  137 (154)
Q Consensus       103 t~~f~~~~~iG~g~~g~vy~g~l~-~g~~vaVK~l~  137 (154)
                      ..+|...++||+|+||.||+|... .+..||+|++.
T Consensus        65 ~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~  100 (440)
T PTZ00036         65 NKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVL  100 (440)
T ss_pred             CCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEe
Confidence            345777788999999999999874 57899999884

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=96.22  E-value=0.0075  Score=43.28  Aligned_cols=47  Identities=28%  Similarity=0.360  Sum_probs=35.0

Q ss_pred             ccccceeecCCCcceEEEEeCCCCEEEEEEecCCCCCChHHHHHHHhh
Q 043043          106 FDRKLVMGKGAFGNVYRGTLRNSMKVAVKRGETGSGQGLPEFQTAIIV  153 (154)
Q Consensus       106 f~~~~~iG~g~~g~vy~g~l~~g~~vaVK~l~~~~~~~~~~f~~e~~~  153 (154)
                      |...+.||+|.+|.||++...++..+++|.+... .....+|.+|+++
T Consensus         6 ~~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~-~~~~~~~~~e~~~   52 (256)
T cd05059           6 LTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREG-AMSEDDFIEEAKV   52 (256)
T ss_pred             cchhhhhccCCCceEEEeEecCCccEEEEEeccC-CCCHHHHHHHHHH
Confidence            4445779999999999999877778999988532 2234568888764

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=96.22  E-value=0.0064  Score=45.67  Aligned_cols=49  Identities=27%  Similarity=0.453  Sum_probs=36.4

Q ss_pred             ccccceeecCCCcceEEEEeCC-CCEEEEEEecCCCCCChHHHHHHHhhC
Q 043043          106 FDRKLVMGKGAFGNVYRGTLRN-SMKVAVKRGETGSGQGLPEFQTAIIVL  154 (154)
Q Consensus       106 f~~~~~iG~g~~g~vy~g~l~~-g~~vaVK~l~~~~~~~~~~f~~e~~~l  154 (154)
                      +...+.||+|.||.||.+...+ |...|||..+..+....+.+.+|+.+|
T Consensus        19 ~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL   68 (313)
T KOG0198|consen   19 WSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRIL   68 (313)
T ss_pred             hhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHH
Confidence            4445779999999999999854 889999999654332245577777654

>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase

Probab=96.22  E-value=0.0084  Score=47.15  Aligned_cols=31  Identities=26%  Similarity=0.299  Sum_probs=27.6

Q ss_pred             cceeecCCCcceEEEEeCCCCEEEEEEecCC
Q 043043          109 KLVMGKGAFGNVYRGTLRNSMKVAVKRGETG  139 (154)
Q Consensus       109 ~~~iG~g~~g~vy~g~l~~g~~vaVK~l~~~  139 (154)
                      .+-||.|++|.||+|++.+|..||||.....
T Consensus       122 ~~plasaSigQVh~A~l~~G~~VaVKv~rp~  152 (437)
T TIGR01982       122 EKPLAAASIAQVHRARLVDGKEVAVKVLRPG  152 (437)
T ss_pred             CcceeeeehhheEEEEecCCCEEEEEeeCCC
Confidence            3569999999999999999999999998644

This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=96.21  E-value=0.0044  Score=45.05  Aligned_cols=51  Identities=29%  Similarity=0.495  Sum_probs=36.4

Q ss_pred             hcCccccceeecCCCcceEEEEeCC------CCEEEEEEecCCC-CCChHHHHHHHhh
Q 043043          103 THNFDRKLVMGKGAFGNVYRGTLRN------SMKVAVKRGETGS-GQGLPEFQTAIIV  153 (154)
Q Consensus       103 t~~f~~~~~iG~g~~g~vy~g~l~~------g~~vaVK~l~~~~-~~~~~~f~~e~~~  153 (154)
                      +++|...+.||+|++|.||++...+      +..|++|...... .....+|..|+.+
T Consensus         5 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~   62 (277)
T cd05036           5 RDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALI   62 (277)
T ss_pred             HHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHH
Confidence            3557777889999999999998854      4578899875332 2233568887654

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=96.20  E-value=0.0066  Score=45.55  Aligned_cols=55  Identities=18%  Similarity=0.129  Sum_probs=39.6

Q ss_pred             HHHhhcCccccceeecCCCcceEEEEeC-CCCEEEEEEecCC--CCCChHHHHHHHhh
Q 043043           99 IKFATHNFDRKLVMGKGAFGNVYRGTLR-NSMKVAVKRGETG--SGQGLPEFQTAIIV  153 (154)
Q Consensus        99 l~~at~~f~~~~~iG~g~~g~vy~g~l~-~g~~vaVK~l~~~--~~~~~~~f~~e~~~  153 (154)
                      +...+++|...+.||.|+||.||++.-. ++..+|+|++...  .......+..|+++
T Consensus         5 ~~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~   62 (328)
T cd07856           5 VFEITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKL   62 (328)
T ss_pred             eeccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHH
Confidence            3445677888889999999999999754 6789999988432  22233566677654

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=96.20  E-value=0.011  Score=43.15  Aligned_cols=49  Identities=16%  Similarity=0.248  Sum_probs=34.8

Q ss_pred             CccccceeecCCCcceEEEEeC-CCCEEEEEEecCCC-CCChHHHHHHHhh
Q 043043          105 NFDRKLVMGKGAFGNVYRGTLR-NSMKVAVKRGETGS-GQGLPEFQTAIIV  153 (154)
Q Consensus       105 ~f~~~~~iG~g~~g~vy~g~l~-~g~~vaVK~l~~~~-~~~~~~f~~e~~~  153 (154)
                      +|.....||+|++|.||++... ++..+|+|.+.... ......+.+|+++
T Consensus         6 ~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~   56 (291)
T cd07844           6 TYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASL   56 (291)
T ss_pred             ceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHH
Confidence            3455578999999999999875 57899999985332 2223456667654

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=96.20  E-value=0.0009  Score=49.31  Aligned_cols=45  Identities=29%  Similarity=0.489  Sum_probs=35.0

Q ss_pred             ceeecCCCcceEEEE-eCCCCEEEEEEecCC--CCCChHHHHHHHhhC
Q 043043          110 LVMGKGAFGNVYRGT-LRNSMKVAVKRGETG--SGQGLPEFQTAIIVL  154 (154)
Q Consensus       110 ~~iG~g~~g~vy~g~-l~~g~~vaVK~l~~~--~~~~~~~f~~e~~~l  154 (154)
                      .+||+|.||+|||.. +.+|..||.|.++.+  +.....+...|+.+|
T Consensus        25 ~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lL   72 (375)
T KOG0591|consen   25 KKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLL   72 (375)
T ss_pred             HHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHH
Confidence            569999999999975 578999999999643  344456788888764

>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]

Probab=96.16  E-value=0.0046  Score=50.31  Aligned_cols=49  Identities=29%  Similarity=0.545  Sum_probs=36.0

Q ss_pred             ccccceeecCCCcceEEEEeCC---C--CEEEEEEecC-CCCCChHHHHHHHhhC
Q 043043          106 FDRKLVMGKGAFGNVYRGTLRN---S--MKVAVKRGET-GSGQGLPEFQTAIIVL  154 (154)
Q Consensus       106 f~~~~~iG~g~~g~vy~g~l~~---g--~~vaVK~l~~-~~~~~~~~f~~e~~~l  154 (154)
                      .....+||.|.||.||+|++.+   |  .-||||.-.. ....+...|.+|+-+|
T Consensus       391 Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iM  445 (974)
T KOG4257|consen  391 ITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIM  445 (974)
T ss_pred             ccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHH
Confidence            3455789999999999999832   2  4689998854 3444467799998654

>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]

Probab=96.11  E-value=0.0042  Score=49.93  Aligned_cols=46  Identities=26%  Similarity=0.504  Sum_probs=33.2

Q ss_pred             cceeecCCCcceEEEEeC-CCCEEEEEEecCC--CCCChHHHHHHHhhC
Q 043043          109 KLVMGKGAFGNVYRGTLR-NSMKVAVKRGETG--SGQGLPEFQTAIIVL  154 (154)
Q Consensus       109 ~~~iG~g~~g~vy~g~l~-~g~~vaVK~l~~~--~~~~~~~f~~e~~~l  154 (154)
                      ...||+|.||.||||+=+ .+..||+|.+...  .....+...+|++++
T Consensus         7 ~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~   55 (808)
T KOG0597|consen    7 YEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRIL   55 (808)
T ss_pred             HHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHH
Confidence            356999999999999865 4578999999533  222335577787763

>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]

Probab=96.11  E-value=0.0037  Score=47.11  Aligned_cols=48  Identities=25%  Similarity=0.349  Sum_probs=32.8

Q ss_pred             ccccceeecCCCcceEEEEe-CCCCEEEEEEecCCCCC-C-hHHHHHHHhh
Q 043043          106 FDRKLVMGKGAFGNVYRGTL-RNSMKVAVKRGETGSGQ-G-LPEFQTAIIV  153 (154)
Q Consensus       106 f~~~~~iG~g~~g~vy~g~l-~~g~~vaVK~l~~~~~~-~-~~~f~~e~~~  153 (154)
                      |...|.|++|.||.||+|.= ..+..||.|++...... . .-.-++|+.+
T Consensus        78 fe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIni  128 (419)
T KOG0663|consen   78 FEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINI  128 (419)
T ss_pred             HHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHH
Confidence            44457899999999999985 34689999999643221 1 1234566654

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=96.10  E-value=0.0076  Score=43.41  Aligned_cols=47  Identities=32%  Similarity=0.486  Sum_probs=35.4

Q ss_pred             ccccceeecCCCcceEEEEeC-CCCEEEEEEecCCCCCChHHHHHHHhh
Q 043043          106 FDRKLVMGKGAFGNVYRGTLR-NSMKVAVKRGETGSGQGLPEFQTAIIV  153 (154)
Q Consensus       106 f~~~~~iG~g~~g~vy~g~l~-~g~~vaVK~l~~~~~~~~~~f~~e~~~  153 (154)
                      |...+.||+|.+|.||++... .+..+++|.+... .....+|.+|+++
T Consensus         8 ~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~-~~~~~~~~~e~~~   55 (263)
T cd05052           8 ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAV   55 (263)
T ss_pred             eEEeeecCCcccceEEEEEEecCCceEEEEEecCC-chHHHHHHHHHHH
Confidence            556678999999999999975 4788999998532 2234567777764

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=96.10  E-value=0.0051  Score=44.94  Aligned_cols=50  Identities=28%  Similarity=0.361  Sum_probs=35.7

Q ss_pred             cCccccceeecCCCcceEEEEeC------CCCEEEEEEecCC-CCCChHHHHHHHhh
Q 043043          104 HNFDRKLVMGKGAFGNVYRGTLR------NSMKVAVKRGETG-SGQGLPEFQTAIIV  153 (154)
Q Consensus       104 ~~f~~~~~iG~g~~g~vy~g~l~------~g~~vaVK~l~~~-~~~~~~~f~~e~~~  153 (154)
                      ++|.....||+|+||.||++..+      .+..+|+|.+... ......+|.+|+.+
T Consensus         5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~   61 (288)
T cd05050           5 NNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAAL   61 (288)
T ss_pred             HhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHH
Confidence            45666788999999999999863      3578999998533 22223568777754

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=96.09  E-value=0.0067  Score=44.11  Aligned_cols=48  Identities=27%  Similarity=0.451  Sum_probs=32.8

Q ss_pred             CccccceeecCCCcceEEEEe-CCCC----EEEEEEecCCCC-CChHHHHHHHh
Q 043043          105 NFDRKLVMGKGAFGNVYRGTL-RNSM----KVAVKRGETGSG-QGLPEFQTAII  152 (154)
Q Consensus       105 ~f~~~~~iG~g~~g~vy~g~l-~~g~----~vaVK~l~~~~~-~~~~~f~~e~~  152 (154)
                      .|...+.||+|+||.||+|.. +++.    .||+|.+..... ....++.+|+.
T Consensus         8 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~   61 (279)
T cd05109           8 ELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAY   61 (279)
T ss_pred             heeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHH
Confidence            355668899999999999985 3444    489999854322 22345666654

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=96.07  E-value=0.005  Score=45.06  Aligned_cols=49  Identities=29%  Similarity=0.396  Sum_probs=35.0

Q ss_pred             CccccceeecCCCcceEEEEeC------CCCEEEEEEecCCCCCChHHHHHHHhh
Q 043043          105 NFDRKLVMGKGAFGNVYRGTLR------NSMKVAVKRGETGSGQGLPEFQTAIIV  153 (154)
Q Consensus       105 ~f~~~~~iG~g~~g~vy~g~l~------~g~~vaVK~l~~~~~~~~~~f~~e~~~  153 (154)
                      +|...+.||+|+||.||++...      ++..+|+|.+..........|.+|+++
T Consensus         6 ~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~   60 (288)
T cd05093           6 NIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAEL   60 (288)
T ss_pred             HeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHH
Confidence            4566688999999999999752      235689998864433334568888765

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=96.05  E-value=0.0079  Score=48.84  Aligned_cols=36  Identities=33%  Similarity=0.547  Sum_probs=30.3

Q ss_pred             hhcCccccceeecCCCcceEEEEeCC-----CCEEEEEEec
Q 043043          102 ATHNFDRKLVMGKGAFGNVYRGTLRN-----SMKVAVKRGE  137 (154)
Q Consensus       102 at~~f~~~~~iG~g~~g~vy~g~l~~-----g~~vaVK~l~  137 (154)
                      ..++|...+.||+|+||.||+|...+     +..||+|++.
T Consensus       130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~  170 (566)
T PLN03225        130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKAT  170 (566)
T ss_pred             ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEec
Confidence            44677788899999999999999854     5789999875

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=96.04  E-value=0.01  Score=42.74  Aligned_cols=49  Identities=24%  Similarity=0.372  Sum_probs=34.6

Q ss_pred             CccccceeecCCCcceEEEEeC-CCCEEEEEEecCCC--CC---ChHHHHHHHhh
Q 043043          105 NFDRKLVMGKGAFGNVYRGTLR-NSMKVAVKRGETGS--GQ---GLPEFQTAIIV  153 (154)
Q Consensus       105 ~f~~~~~iG~g~~g~vy~g~l~-~g~~vaVK~l~~~~--~~---~~~~f~~e~~~  153 (154)
                      +|...++||+|+||.||.+... ++..|++|.+....  ..   ....|.+|+.+
T Consensus         3 ~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~   57 (265)
T cd06652           3 NWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQL   57 (265)
T ss_pred             cceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHH
Confidence            5666788999999999999874 57899999885321  11   12356667654

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]

Probab=96.04  E-value=0.0053  Score=46.00  Aligned_cols=31  Identities=29%  Similarity=0.446  Sum_probs=25.7

Q ss_pred             cceeecCCCcceEEEEe-CCCCEEEEEEecCC
Q 043043          109 KLVMGKGAFGNVYRGTL-RNSMKVAVKRGETG  139 (154)
Q Consensus       109 ~~~iG~g~~g~vy~g~l-~~g~~vaVK~l~~~  139 (154)
                      .+.||+|.||.||+|+- ..|..||+|++...
T Consensus        16 ~eklGeGtyg~Vykar~~~~g~~VALKkirl~   47 (323)
T KOG0594|consen   16 VEKLGEGTYGVVYKARSKRTGKFVALKKIRLE   47 (323)
T ss_pred             HHHhCCCCceEEEEEEEecCCCEEEEEEEecc
Confidence            35599999999999986 46789999999543

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=96.02  E-value=0.013  Score=42.16  Aligned_cols=47  Identities=28%  Similarity=0.476  Sum_probs=34.7

Q ss_pred             ccccceeecCCCcceEEEEeCCCCEEEEEEecCCCCCChHHHHHHHhh
Q 043043          106 FDRKLVMGKGAFGNVYRGTLRNSMKVAVKRGETGSGQGLPEFQTAIIV  153 (154)
Q Consensus       106 f~~~~~iG~g~~g~vy~g~l~~g~~vaVK~l~~~~~~~~~~f~~e~~~  153 (154)
                      +.-...||+|++|.||++...++..+++|.+.... .....|.+|+.+
T Consensus         8 ~~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~-~~~~~~~~E~~~   54 (260)
T cd05069           8 LRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGT-MMPEAFLQEAQI   54 (260)
T ss_pred             eeeeeeecCcCCCeEEEEEEcCCceEEEEEcccCC-ccHHHHHHHHHH
Confidence            33446799999999999998777789999885432 234567777754

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=96.02  E-value=0.0085  Score=43.37  Aligned_cols=50  Identities=22%  Similarity=0.377  Sum_probs=35.7

Q ss_pred             cCccccceeecCCCcceEEEEeC------CCCEEEEEEecCCCCC-ChHHHHHHHhh
Q 043043          104 HNFDRKLVMGKGAFGNVYRGTLR------NSMKVAVKRGETGSGQ-GLPEFQTAIIV  153 (154)
Q Consensus       104 ~~f~~~~~iG~g~~g~vy~g~l~------~g~~vaVK~l~~~~~~-~~~~f~~e~~~  153 (154)
                      .+|.....||+|+||.||++...      +...+++|.+...... ...+|.+|+++
T Consensus         5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~   61 (275)
T cd05046           5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDM   61 (275)
T ss_pred             HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHH
Confidence            34666678999999999999874      2357899988643322 23568888765

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=96.02  E-value=0.014  Score=43.01  Aligned_cols=49  Identities=22%  Similarity=0.305  Sum_probs=36.1

Q ss_pred             CccccceeecCCCcceEEEEe-CCCCEEEEEEecCCCCCChHHHHHHHhh
Q 043043          105 NFDRKLVMGKGAFGNVYRGTL-RNSMKVAVKRGETGSGQGLPEFQTAIIV  153 (154)
Q Consensus       105 ~f~~~~~iG~g~~g~vy~g~l-~~g~~vaVK~l~~~~~~~~~~f~~e~~~  153 (154)
                      +|.....||.|.+|.||++.- .++..+++|.+..........|.+|+.+
T Consensus        21 ~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~   70 (296)
T cd06654          21 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILV   70 (296)
T ss_pred             ceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHH
Confidence            345556799999999999985 4678999999965444444567777654

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=96.00  E-value=0.014  Score=43.08  Aligned_cols=49  Identities=22%  Similarity=0.291  Sum_probs=36.8

Q ss_pred             CccccceeecCCCcceEEEEe-CCCCEEEEEEecCCCCCChHHHHHHHhh
Q 043043          105 NFDRKLVMGKGAFGNVYRGTL-RNSMKVAVKRGETGSGQGLPEFQTAIIV  153 (154)
Q Consensus       105 ~f~~~~~iG~g~~g~vy~g~l-~~g~~vaVK~l~~~~~~~~~~f~~e~~~  153 (154)
                      +|.....||.|.+|.||++.- .++..|++|.+..........+.+|+++
T Consensus        20 ~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~   69 (296)
T cd06655          20 KYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILV   69 (296)
T ss_pred             eEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHH
Confidence            456667899999999999975 5678999999865444445567777654

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=96.00  E-value=0.0054  Score=44.15  Aligned_cols=48  Identities=25%  Similarity=0.392  Sum_probs=34.6

Q ss_pred             ccccceeecCCCcceEEEEe-CCCCEEEEEEecCCC---CCChHHHHHHHhh
Q 043043          106 FDRKLVMGKGAFGNVYRGTL-RNSMKVAVKRGETGS---GQGLPEFQTAIIV  153 (154)
Q Consensus       106 f~~~~~iG~g~~g~vy~g~l-~~g~~vaVK~l~~~~---~~~~~~f~~e~~~  153 (154)
                      |...+.||+|.+|.||++.. .++..++||.+....   .....+|.+|+.+
T Consensus         4 y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~   55 (267)
T cd08229           4 FRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDL   55 (267)
T ss_pred             hhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHH
Confidence            44557799999999999986 578899999885321   2223467777754

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=96.00  E-value=0.012  Score=42.67  Aligned_cols=48  Identities=29%  Similarity=0.484  Sum_probs=33.8

Q ss_pred             ccccceeecCCCcceEEEEeC-CCCEEEEEEecCCC-CCChHHHHHHHhh
Q 043043          106 FDRKLVMGKGAFGNVYRGTLR-NSMKVAVKRGETGS-GQGLPEFQTAIIV  153 (154)
Q Consensus       106 f~~~~~iG~g~~g~vy~g~l~-~g~~vaVK~l~~~~-~~~~~~f~~e~~~  153 (154)
                      |...+.||+|+||.||+|... ++..+|+|.+.... ......|.+|+.+
T Consensus         6 ~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~   55 (277)
T cd06641           6 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITV   55 (277)
T ss_pred             hhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHH
Confidence            444577999999999999864 67889999885322 2223467777654

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=95.97  E-value=0.0048  Score=44.83  Aligned_cols=48  Identities=27%  Similarity=0.427  Sum_probs=35.3

Q ss_pred             ccccceeecCCCcceEEEEeC-CCCEEEEEEecCCCCCChHHHHHHHhh
Q 043043          106 FDRKLVMGKGAFGNVYRGTLR-NSMKVAVKRGETGSGQGLPEFQTAIIV  153 (154)
Q Consensus       106 f~~~~~iG~g~~g~vy~g~l~-~g~~vaVK~l~~~~~~~~~~f~~e~~~  153 (154)
                      |.-...||.|.+|.||++... ++..+++|............|..|+++
T Consensus         7 ~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~   55 (280)
T cd06611           7 WEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDI   55 (280)
T ss_pred             HHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHH
Confidence            444456999999999999985 578899999864433334568788764

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=95.96  E-value=0.012  Score=44.23  Aligned_cols=50  Identities=24%  Similarity=0.220  Sum_probs=35.2

Q ss_pred             cCccccceeecCCCcceEEEEe-CCCCEEEEEEecCC--CCCChHHHHHHHhh
Q 043043          104 HNFDRKLVMGKGAFGNVYRGTL-RNSMKVAVKRGETG--SGQGLPEFQTAIIV  153 (154)
Q Consensus       104 ~~f~~~~~iG~g~~g~vy~g~l-~~g~~vaVK~l~~~--~~~~~~~f~~e~~~  153 (154)
                      .+|.....||+|+||.||++.- .++..||||.+...  .......+.+|+.+
T Consensus        15 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~   67 (343)
T cd07878          15 ERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRL   67 (343)
T ss_pred             hhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHH
Confidence            4566667899999999999986 45678999998532  11223456667654

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=95.96  E-value=0.015  Score=43.62  Aligned_cols=50  Identities=22%  Similarity=0.246  Sum_probs=35.8

Q ss_pred             cCccccceeecCCCcceEEEEe-CCCCEEEEEEecCCC-CCChHHHHHHHhh
Q 043043          104 HNFDRKLVMGKGAFGNVYRGTL-RNSMKVAVKRGETGS-GQGLPEFQTAIIV  153 (154)
Q Consensus       104 ~~f~~~~~iG~g~~g~vy~g~l-~~g~~vaVK~l~~~~-~~~~~~f~~e~~~  153 (154)
                      .+|...+.||+|++|.||+|.- .+|..||+|.+.... ......+.+|+.+
T Consensus         5 ~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~   56 (336)
T cd07849           5 PRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKI   56 (336)
T ss_pred             cceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHH
Confidence            4566678899999999999985 467899999985322 2223456667654

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=95.95  E-value=0.015  Score=42.97  Aligned_cols=50  Identities=22%  Similarity=0.288  Sum_probs=34.9

Q ss_pred             cCccccceeecCCCcceEEEEeC-CCCEEEEEEecCCC--CCChHHHHHHHhh
Q 043043          104 HNFDRKLVMGKGAFGNVYRGTLR-NSMKVAVKRGETGS--GQGLPEFQTAIIV  153 (154)
Q Consensus       104 ~~f~~~~~iG~g~~g~vy~g~l~-~g~~vaVK~l~~~~--~~~~~~f~~e~~~  153 (154)
                      .+|...+.||+|.||.||++... +|..||+|.+....  ......+.+|+.+
T Consensus         7 ~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~   59 (309)
T cd07845           7 TEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITL   59 (309)
T ss_pred             cceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHH
Confidence            45667788999999999999874 57899999985322  1112334556543

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=95.95  E-value=0.0064  Score=43.92  Aligned_cols=48  Identities=29%  Similarity=0.502  Sum_probs=33.8

Q ss_pred             ccccceeecCCCcceEEEEeCC-C---CEEEEEEecCC-CCCChHHHHHHHhh
Q 043043          106 FDRKLVMGKGAFGNVYRGTLRN-S---MKVAVKRGETG-SGQGLPEFQTAIIV  153 (154)
Q Consensus       106 f~~~~~iG~g~~g~vy~g~l~~-g---~~vaVK~l~~~-~~~~~~~f~~e~~~  153 (154)
                      +...+.||+|+||.||+|...+ +   ..+++|.+... ......+|..|+.+
T Consensus         6 ~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~   58 (269)
T cd05065           6 VKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASI   58 (269)
T ss_pred             eEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHH
Confidence            3445789999999999999753 2   36999998643 22234568888764

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=95.95  E-value=0.012  Score=42.45  Aligned_cols=49  Identities=24%  Similarity=0.400  Sum_probs=34.9

Q ss_pred             CccccceeecCCCcceEEEEeC-CCCEEEEEEecCCCC-----CChHHHHHHHhh
Q 043043          105 NFDRKLVMGKGAFGNVYRGTLR-NSMKVAVKRGETGSG-----QGLPEFQTAIIV  153 (154)
Q Consensus       105 ~f~~~~~iG~g~~g~vy~g~l~-~g~~vaVK~l~~~~~-----~~~~~f~~e~~~  153 (154)
                      +|...++||+|+||.||++.-. .+..+++|.+.....     .....+.+|+.+
T Consensus         3 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~   57 (266)
T cd06651           3 NWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQL   57 (266)
T ss_pred             CccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHH
Confidence            5677789999999999999864 578999998853211     112346667654

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>PTZ00382 Variant-specific surface protein (VSP); Provisional

Probab=95.94  E-value=0.0036  Score=38.77  Aligned_cols=23  Identities=17%  Similarity=0.063  Sum_probs=13.9

Q ss_pred             CCcceeEEEehhHHHHHHHHHHH
Q 043043           17 KKKHFMAVVGSVLACSVLICILE   39 (154)
Q Consensus        17 ~~~~~~~ii~~~v~~~vll~i~~   39 (154)
                      +......|+++++++++++.+++
T Consensus        61 ~~ls~gaiagi~vg~~~~v~~lv   83 (96)
T PTZ00382         61 SGLSTGAIAGISVAVVAVVGGLV   83 (96)
T ss_pred             CCcccccEEEEEeehhhHHHHHH
Confidence            44455677887777665554433

>PF08374 Protocadherin: Protocadherin; InterPro: IPR013585 The structure of protocadherins is similar to that of classic cadherins (IPR002126 from INTERPRO), but they also have some unique features associated with the cytoplasmic domains

Probab=95.94  E-value=0.013  Score=41.10  Aligned_cols=30  Identities=17%  Similarity=0.181  Sum_probs=17.8

Q ss_pred             CCCCcceeEEEehhHHHHHHHHHHHHHHHH
Q 043043           15 GPKKKHFMAVVGSVLACSVLICILEIVLSF   44 (154)
Q Consensus        15 ~~~~~~~~~ii~~~v~~~vll~i~~~~~~~   44 (154)
                      ...+....+++|+++|++.++++|++..++
T Consensus        31 ~~~~d~~~I~iaiVAG~~tVILVI~i~v~v   60 (221)
T PF08374_consen   31 SRSKDYVKIMIAIVAGIMTVILVIFIVVLV   60 (221)
T ss_pred             cccccceeeeeeeecchhhhHHHHHHHHHH
Confidence            344566677777777766655555444444

They are expressed in a variety of organisms and are found in high concentrations in the brain where they seem to be localised mainly at cell-cell contact sites. Their expression seems to be developmentally regulated [].

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=95.92  E-value=0.0073  Score=43.86  Aligned_cols=51  Identities=25%  Similarity=0.397  Sum_probs=35.5

Q ss_pred             hcCccccceeecCCCcceEEEEeC------CCCEEEEEEecCCC-CCChHHHHHHHhh
Q 043043          103 THNFDRKLVMGKGAFGNVYRGTLR------NSMKVAVKRGETGS-GQGLPEFQTAIIV  153 (154)
Q Consensus       103 t~~f~~~~~iG~g~~g~vy~g~l~------~g~~vaVK~l~~~~-~~~~~~f~~e~~~  153 (154)
                      +++|...+.||+|+||.||+|...      .+..+|+|.+.... .....+|.+|+.+
T Consensus         5 ~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~   62 (277)
T cd05062           5 REKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASV   62 (277)
T ss_pred             HHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHH
Confidence            445777788999999999998763      24579999985322 2223467777654

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=95.92  E-value=0.0063  Score=46.52  Aligned_cols=50  Identities=24%  Similarity=0.210  Sum_probs=35.4

Q ss_pred             cCccccceeecCCCcceEEEEeC-CCCEEEEEEecCC---CCCChHHHHHHHhh
Q 043043          104 HNFDRKLVMGKGAFGNVYRGTLR-NSMKVAVKRGETG---SGQGLPEFQTAIIV  153 (154)
Q Consensus       104 ~~f~~~~~iG~g~~g~vy~g~l~-~g~~vaVK~l~~~---~~~~~~~f~~e~~~  153 (154)
                      .+|...+.||+|+||.||++.-. ++..+|+|.+...   .......|..|+.+
T Consensus        43 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i   96 (370)
T cd05596          43 EDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDI   96 (370)
T ss_pred             HHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHH
Confidence            45666678999999999999874 5788999998521   22223446666654

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=95.91  E-value=0.016  Score=42.64  Aligned_cols=49  Identities=24%  Similarity=0.308  Sum_probs=35.4

Q ss_pred             CccccceeecCCCcceEEEEe-CCCCEEEEEEecCCCCCChHHHHHHHhh
Q 043043          105 NFDRKLVMGKGAFGNVYRGTL-RNSMKVAVKRGETGSGQGLPEFQTAIIV  153 (154)
Q Consensus       105 ~f~~~~~iG~g~~g~vy~g~l-~~g~~vaVK~l~~~~~~~~~~f~~e~~~  153 (154)
                      +|...+.||+|+||.||++.- .++..+++|.+..........|.+|+.+
T Consensus        20 ~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~   69 (293)
T cd06647          20 KYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILV   69 (293)
T ss_pred             hceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHH
Confidence            455557799999999999985 4568899999864333334567777654

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain

Probab=95.90  E-value=0.014  Score=40.55  Aligned_cols=32  Identities=22%  Similarity=0.115  Sum_probs=27.7

Q ss_pred             ccccceeecCCCcceEEEEeCCCCEEEEEEec
Q 043043          106 FDRKLVMGKGAFGNVYRGTLRNSMKVAVKRGE  137 (154)
Q Consensus       106 f~~~~~iG~g~~g~vy~g~l~~g~~vaVK~l~  137 (154)
                      +...+.||+|+||.||++..++|..||||...
T Consensus        17 ~~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~   48 (198)
T cd05144          17 ESLGNQIGVGKESDVYLALDPDGNPVALKFHR   48 (198)
T ss_pred             hhcCCccccCcceEEEEEEcCCCCEEEEEEEe
Confidence            34457799999999999999889999999874

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=95.90  E-value=0.0067  Score=44.26  Aligned_cols=47  Identities=23%  Similarity=0.261  Sum_probs=33.6

Q ss_pred             cccceeecCCCcceEEEEeC-CCCEEEEEEecCCC-CCChHHHHHHHhh
Q 043043          107 DRKLVMGKGAFGNVYRGTLR-NSMKVAVKRGETGS-GQGLPEFQTAIIV  153 (154)
Q Consensus       107 ~~~~~iG~g~~g~vy~g~l~-~g~~vaVK~l~~~~-~~~~~~f~~e~~~  153 (154)
                      .....||+|+||.||++... ++..+|+|.+.... ......|..|+.+
T Consensus         7 ~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~   55 (288)
T cd06616           7 KDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDV   55 (288)
T ss_pred             HHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHH
Confidence            33467999999999998874 57899999986432 2234567777654

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=95.88  E-value=0.011  Score=44.46  Aligned_cols=51  Identities=20%  Similarity=0.160  Sum_probs=36.6

Q ss_pred             cCccccceeecCCCcceEEEEeC-CCCEEEEEEecCCCC-CChHHHHHHHhhC
Q 043043          104 HNFDRKLVMGKGAFGNVYRGTLR-NSMKVAVKRGETGSG-QGLPEFQTAIIVL  154 (154)
Q Consensus       104 ~~f~~~~~iG~g~~g~vy~g~l~-~g~~vaVK~l~~~~~-~~~~~f~~e~~~l  154 (154)
                      ++|.....||+|+||.||++... ++..+|+|.+..... .....|.+|+++|
T Consensus         5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l   57 (331)
T cd06649           5 DDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVL   57 (331)
T ss_pred             ccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHH
Confidence            34566678999999999999875 567899998864321 2235688887653

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=95.88  E-value=0.016  Score=42.48  Aligned_cols=49  Identities=18%  Similarity=0.315  Sum_probs=35.3

Q ss_pred             CccccceeecCCCcceEEEEeC-CCCEEEEEEecCCC--CCChHHHHHHHhh
Q 043043          105 NFDRKLVMGKGAFGNVYRGTLR-NSMKVAVKRGETGS--GQGLPEFQTAIIV  153 (154)
Q Consensus       105 ~f~~~~~iG~g~~g~vy~g~l~-~g~~vaVK~l~~~~--~~~~~~f~~e~~~  153 (154)
                      +|.....||+|.+|.||+|... ++..+++|.+....  ......|.+|+++
T Consensus         3 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~   54 (294)
T PLN00009          3 QYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISL   54 (294)
T ss_pred             ceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHH
Confidence            4555678999999999999875 67899999985322  2223567777654

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=95.87  E-value=0.011  Score=42.16  Aligned_cols=48  Identities=27%  Similarity=0.436  Sum_probs=36.3

Q ss_pred             cCccccceeecCCCcceEEEEeCC-CCEEEEEEecCCCCCChHHHHHHHhh
Q 043043          104 HNFDRKLVMGKGAFGNVYRGTLRN-SMKVAVKRGETGSGQGLPEFQTAIIV  153 (154)
Q Consensus       104 ~~f~~~~~iG~g~~g~vy~g~l~~-g~~vaVK~l~~~~~~~~~~f~~e~~~  153 (154)
                      ++|...+.||+|.+|.||++...+ +..+++|.+.....  ..+|.+|+++
T Consensus         3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~e~~~   51 (256)
T cd06612           3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED--LQEIIKEISI   51 (256)
T ss_pred             ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH--HHHHHHHHHH
Confidence            345566779999999999999865 68899999854322  5678888764

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=95.87  E-value=0.015  Score=43.86  Aligned_cols=51  Identities=20%  Similarity=0.180  Sum_probs=36.0

Q ss_pred             hcCccccceeecCCCcceEEEEe-CCCCEEEEEEecCCC--CCChHHHHHHHhh
Q 043043          103 THNFDRKLVMGKGAFGNVYRGTL-RNSMKVAVKRGETGS--GQGLPEFQTAIIV  153 (154)
Q Consensus       103 t~~f~~~~~iG~g~~g~vy~g~l-~~g~~vaVK~l~~~~--~~~~~~f~~e~~~  153 (154)
                      ..+|...+.||+|++|.||++.. .++..||+|.+....  ......+.+|+++
T Consensus        14 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~   67 (343)
T cd07880          14 PDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRL   67 (343)
T ss_pred             ccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHH
Confidence            34577778899999999999985 468899999985321  1122356667654

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>PF02439 Adeno_E3_CR2: Adenovirus E3 region protein CR2; InterPro: IPR003470 Early region 3 (E3) of human adenoviruses (Ads) codes for proteins that appear to control viral interactions with the host []

Probab=95.86  E-value=0.0041  Score=31.24  Aligned_cols=7  Identities=29%  Similarity=0.377  Sum_probs=2.6

Q ss_pred             hhHHHHH
Q 043043           27 SVLACSV   33 (154)
Q Consensus        27 ~~v~~~v   33 (154)
                      +++++++
T Consensus         8 IIv~V~v   14 (38)
T PF02439_consen    8 IIVAVVV   14 (38)
T ss_pred             HHHHHHH
Confidence            3333333

This region called CR1 (conserved region 1) [] is found three times in Human adenovirus 19 (a subgroup D adenovirus) 49 kDa protein in the E3 region. CR1 is also found in the 20.1 Kd protein of subgroup B adenoviruses. The function of this 80 amino acid region is unknown. This region is probably a divergent immunoglobulin domain.

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=95.84  E-value=0.013  Score=43.15  Aligned_cols=44  Identities=23%  Similarity=0.305  Sum_probs=33.4

Q ss_pred             ceeecCCCcceEEEEe-CCCCEEEEEEecCCCCCChHHHHHHHhh
Q 043043          110 LVMGKGAFGNVYRGTL-RNSMKVAVKRGETGSGQGLPEFQTAIIV  153 (154)
Q Consensus       110 ~~iG~g~~g~vy~g~l-~~g~~vaVK~l~~~~~~~~~~f~~e~~~  153 (154)
                      ..||+|+||.||++.. .++..+++|.+..........|.+|+.+
T Consensus        26 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~   70 (292)
T cd06657          26 IKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVI   70 (292)
T ss_pred             HHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHH
Confidence            4589999999999988 4678999999864444344567777654

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=95.84  E-value=0.01  Score=43.42  Aligned_cols=46  Identities=30%  Similarity=0.408  Sum_probs=34.0

Q ss_pred             ccceeecCCCcceEEEEeC-CCCEEEEEEecCCCCCChHHHHHHHhh
Q 043043          108 RKLVMGKGAFGNVYRGTLR-NSMKVAVKRGETGSGQGLPEFQTAIIV  153 (154)
Q Consensus       108 ~~~~iG~g~~g~vy~g~l~-~g~~vaVK~l~~~~~~~~~~f~~e~~~  153 (154)
                      ....||.|+||.||++... ++..+++|.+.........+|..|+++
T Consensus        16 i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~   62 (292)
T cd06644          16 IIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEI   62 (292)
T ss_pred             hhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHH
Confidence            3466999999999999875 478899999865443334567777653

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]

Probab=95.84  E-value=0.0096  Score=49.33  Aligned_cols=49  Identities=22%  Similarity=0.305  Sum_probs=39.6

Q ss_pred             ccccceeecCCCcceEEEEeCCC-CEEEEEEecCCCCCChHHHHHHHhhC
Q 043043          106 FDRKLVMGKGAFGNVYRGTLRNS-MKVAVKRGETGSGQGLPEFQTAIIVL  154 (154)
Q Consensus       106 f~~~~~iG~g~~g~vy~g~l~~g-~~vaVK~l~~~~~~~~~~f~~e~~~l  154 (154)
                      ..-+++|-+|+|+.||.+...++ ..+|+|++-..+....+...+|+++|
T Consensus        39 v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~M   88 (738)
T KOG1989|consen   39 VTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIM   88 (738)
T ss_pred             EEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHH
Confidence            34558899999999999999776 89999999554555567788898875

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=95.83  E-value=0.0092  Score=43.49  Aligned_cols=48  Identities=31%  Similarity=0.418  Sum_probs=34.5

Q ss_pred             ccccceeecCCCcceEEEEeC------CCCEEEEEEecCCCCCChHHHHHHHhh
Q 043043          106 FDRKLVMGKGAFGNVYRGTLR------NSMKVAVKRGETGSGQGLPEFQTAIIV  153 (154)
Q Consensus       106 f~~~~~iG~g~~g~vy~g~l~------~g~~vaVK~l~~~~~~~~~~f~~e~~~  153 (154)
                      +.....||+|+||.||++...      ++..+++|.+.........+|.+|+++
T Consensus         7 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~   60 (280)
T cd05092           7 IVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAEL   60 (280)
T ss_pred             ceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHH
Confidence            444577999999999999742      345789998865444444678888764

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=95.81  E-value=0.013  Score=42.66  Aligned_cols=51  Identities=24%  Similarity=0.342  Sum_probs=38.2

Q ss_pred             hhcCccccceeecCCCcceEEEEeC-CCCEEEEEEecCCCCCChHHHHHHHhh
Q 043043          102 ATHNFDRKLVMGKGAFGNVYRGTLR-NSMKVAVKRGETGSGQGLPEFQTAIIV  153 (154)
Q Consensus       102 at~~f~~~~~iG~g~~g~vy~g~l~-~g~~vaVK~l~~~~~~~~~~f~~e~~~  153 (154)
                      .+.+|...+.||+|.+|.||++..+ ++..+++|.+..... ....|..|+++
T Consensus        17 ~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~e~~~   68 (286)
T cd06614          17 PRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ-NKELIINEILI   68 (286)
T ss_pred             ccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch-hHHHHHHHHHH
Confidence            4455666678999999999999986 578899999964332 44567777764

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=95.81  E-value=0.012  Score=44.25  Aligned_cols=50  Identities=16%  Similarity=0.179  Sum_probs=35.8

Q ss_pred             cCccccceeecCCCcceEEEEeC-CCCEEEEEEecCCCC-CChHHHHHHHhh
Q 043043          104 HNFDRKLVMGKGAFGNVYRGTLR-NSMKVAVKRGETGSG-QGLPEFQTAIIV  153 (154)
Q Consensus       104 ~~f~~~~~iG~g~~g~vy~g~l~-~g~~vaVK~l~~~~~-~~~~~f~~e~~~  153 (154)
                      ++|.....||+|+||.||++... ++..+|+|.+..... ....+|.+|+++
T Consensus         5 ~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~   56 (333)
T cd06650           5 DDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQV   56 (333)
T ss_pred             hhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHH
Confidence            34556678999999999999875 567889998854322 223467788765

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>PF15102 TMEM154: TMEM154 protein family

Probab=95.80  E-value=0.025  Score=37.47  Aligned_cols=8  Identities=25%  Similarity=0.210  Sum_probs=3.9

Q ss_pred             ccHHHHHH
Q 043043           94 IPYVEIKF  101 (154)
Q Consensus        94 ~~~~~l~~  101 (154)
                      +.+++|..
T Consensus       125 iEmeeldk  132 (146)
T PF15102_consen  125 IEMEELDK  132 (146)
T ss_pred             hhHHHHHh
Confidence            44555543

>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]

Probab=95.80  E-value=0.0038  Score=50.96  Aligned_cols=45  Identities=40%  Similarity=0.474  Sum_probs=34.9

Q ss_pred             ceeecCCCcceEEEE-eCCCCEEEEEEecCCC-CCChHHHHHHHhhC
Q 043043          110 LVMGKGAFGNVYRGT-LRNSMKVAVKRGETGS-GQGLPEFQTAIIVL  154 (154)
Q Consensus       110 ~~iG~g~~g~vy~g~-l~~g~~vaVK~l~~~~-~~~~~~f~~e~~~l  154 (154)
                      ..||+|+||.||+|+ -..|..||||..+... ....+.+.+|+++|
T Consensus        19 e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~Eieil   65 (732)
T KOG4250|consen   19 ERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEIL   65 (732)
T ss_pred             hhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHH
Confidence            559999999999999 5678999999996543 33345677787764

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=95.80  E-value=0.011  Score=45.24  Aligned_cols=51  Identities=22%  Similarity=0.199  Sum_probs=35.5

Q ss_pred             hcCccccceeecCCCcceEEEEeC-CCCEEEEEEecCC---CCCChHHHHHHHhh
Q 043043          103 THNFDRKLVMGKGAFGNVYRGTLR-NSMKVAVKRGETG---SGQGLPEFQTAIIV  153 (154)
Q Consensus       103 t~~f~~~~~iG~g~~g~vy~g~l~-~g~~vaVK~l~~~---~~~~~~~f~~e~~~  153 (154)
                      ..+|...+.||+|+||.||++... ++..+|+|.+...   .......+.+|+++
T Consensus        42 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i   96 (370)
T cd05621          42 AEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDI   96 (370)
T ss_pred             HHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHH
Confidence            355666778999999999999875 4678999998531   12223446666654

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=95.79  E-value=0.016  Score=43.92  Aligned_cols=50  Identities=18%  Similarity=0.193  Sum_probs=35.7

Q ss_pred             cCccccceeecCCCcceEEEEeC-CCCEEEEEEecCC--CCCChHHHHHHHhh
Q 043043          104 HNFDRKLVMGKGAFGNVYRGTLR-NSMKVAVKRGETG--SGQGLPEFQTAIIV  153 (154)
Q Consensus       104 ~~f~~~~~iG~g~~g~vy~g~l~-~g~~vaVK~l~~~--~~~~~~~f~~e~~~  153 (154)
                      .+|.....||+|+||.||++.-. .|..+|+|.+...  .......+.+|+.+
T Consensus        21 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~   73 (359)
T cd07876          21 KRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVL   73 (359)
T ss_pred             hceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHH
Confidence            45666688999999999999763 5789999999532  22223456677654

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=95.79  E-value=0.0085  Score=43.86  Aligned_cols=50  Identities=30%  Similarity=0.440  Sum_probs=33.3

Q ss_pred             cCccccceeecCCCcceEEEEeC------CCCEEEEEEecCCCC-CChHHHHHHHhh
Q 043043          104 HNFDRKLVMGKGAFGNVYRGTLR------NSMKVAVKRGETGSG-QGLPEFQTAIIV  153 (154)
Q Consensus       104 ~~f~~~~~iG~g~~g~vy~g~l~------~g~~vaVK~l~~~~~-~~~~~f~~e~~~  153 (154)
                      .+|.....||+|+||.||+|...      .+..||+|.+..... .....|.+|+.+
T Consensus         6 ~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~   62 (288)
T cd05061           6 EKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASV   62 (288)
T ss_pred             HHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHH
Confidence            34555678999999999999753      245799998853322 122356666643

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=95.78  E-value=0.013  Score=44.38  Aligned_cols=48  Identities=27%  Similarity=0.358  Sum_probs=33.4

Q ss_pred             ccccceeecCCCcceEEEEeCC--CCEEEEEEecCC---CCCChHHHHHHHhh
Q 043043          106 FDRKLVMGKGAFGNVYRGTLRN--SMKVAVKRGETG---SGQGLPEFQTAIIV  153 (154)
Q Consensus       106 f~~~~~iG~g~~g~vy~g~l~~--g~~vaVK~l~~~---~~~~~~~f~~e~~~  153 (154)
                      |.....||+|+||.||++...+  +..||+|.+...   .......+.+|+++
T Consensus        32 y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~   84 (340)
T PTZ00426         32 FNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKI   84 (340)
T ss_pred             cEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHH
Confidence            5556789999999999998643  357999998421   22233456777654

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=95.77  E-value=0.021  Score=48.78  Aligned_cols=49  Identities=24%  Similarity=0.314  Sum_probs=36.1

Q ss_pred             CccccceeecCCCcceEEEEeC-CCCEEEEEEecCCCCC---ChHHHHHHHhh
Q 043043          105 NFDRKLVMGKGAFGNVYRGTLR-NSMKVAVKRGETGSGQ---GLPEFQTAIIV  153 (154)
Q Consensus       105 ~f~~~~~iG~g~~g~vy~g~l~-~g~~vaVK~l~~~~~~---~~~~f~~e~~~  153 (154)
                      +|...++||+|+||.||++.-. .+..||+|++......   ....|.+|+++
T Consensus         3 rYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~I   55 (932)
T PRK13184          3 RYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKI   55 (932)
T ss_pred             CeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHH
Confidence            4556688999999999999864 5789999999532111   23468888765

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=95.75  E-value=0.017  Score=42.29  Aligned_cols=48  Identities=23%  Similarity=0.279  Sum_probs=35.4

Q ss_pred             ccccceeecCCCcceEEEEe-CCCCEEEEEEecCCCCCChHHHHHHHhh
Q 043043          106 FDRKLVMGKGAFGNVYRGTL-RNSMKVAVKRGETGSGQGLPEFQTAIIV  153 (154)
Q Consensus       106 f~~~~~iG~g~~g~vy~g~l-~~g~~vaVK~l~~~~~~~~~~f~~e~~~  153 (154)
                      +...+.||+|.+|.||++.. .++..+++|.+..........+.+|+.+
T Consensus        21 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~   69 (285)
T cd06648          21 LDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVI   69 (285)
T ss_pred             hhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHH
Confidence            44457899999999999986 4678899999864444444567777653

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]

Probab=95.75  E-value=0.017  Score=43.83  Aligned_cols=54  Identities=19%  Similarity=0.165  Sum_probs=39.0

Q ss_pred             ccHHHHHHhhcCccccceeecCCCcceEEEEeC-CCCEEEEEEecCC-CCCChHHHHHHHhhC
Q 043043           94 IPYVEIKFATHNFDRKLVMGKGAFGNVYRGTLR-NSMKVAVKRGETG-SGQGLPEFQTAIIVL  154 (154)
Q Consensus        94 ~~~~~l~~at~~f~~~~~iG~g~~g~vy~g~l~-~g~~vaVK~l~~~-~~~~~~~f~~e~~~l  154 (154)
                      ++..||+.       .+.||+|..|+|||+.-. .+..+|.|.+... ...-.++..+|++++
T Consensus        76 i~~~dle~-------~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il  131 (364)
T KOG0581|consen   76 ISLSDLER-------LGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEIL  131 (364)
T ss_pred             cCHHHhhh-------hhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHH
Confidence            44555554       367999999999999874 6788999999432 233356788888764

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=95.74  E-value=0.019  Score=42.13  Aligned_cols=47  Identities=17%  Similarity=0.248  Sum_probs=33.1

Q ss_pred             ccccceeecCCCcceEEEEeCC-CCEEEEEEecCCC-CCChHHHHHHHh
Q 043043          106 FDRKLVMGKGAFGNVYRGTLRN-SMKVAVKRGETGS-GQGLPEFQTAII  152 (154)
Q Consensus       106 f~~~~~iG~g~~g~vy~g~l~~-g~~vaVK~l~~~~-~~~~~~f~~e~~  152 (154)
                      |...+.||+|.+|.||++...+ +..+|||.+.... .....++..|++
T Consensus        17 ~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~   65 (296)
T cd06618          17 LENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLD   65 (296)
T ss_pred             heeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHH
Confidence            4455789999999999999875 7899999985322 222234555543

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=95.72  E-value=0.0096  Score=43.02  Aligned_cols=48  Identities=25%  Similarity=0.426  Sum_probs=33.9

Q ss_pred             ccccceeecCCCcceEEEEeCCC----CEEEEEEecCCC-CCChHHHHHHHhh
Q 043043          106 FDRKLVMGKGAFGNVYRGTLRNS----MKVAVKRGETGS-GQGLPEFQTAIIV  153 (154)
Q Consensus       106 f~~~~~iG~g~~g~vy~g~l~~g----~~vaVK~l~~~~-~~~~~~f~~e~~~  153 (154)
                      +...+.||+|+||.||+|...+.    ..+++|...... ......|.+|+.+
T Consensus         8 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~   60 (270)
T cd05056           8 ITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYI   60 (270)
T ss_pred             ceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHH
Confidence            45567899999999999987432    468899885433 2234568888754

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=95.72  E-value=0.012  Score=42.54  Aligned_cols=49  Identities=27%  Similarity=0.467  Sum_probs=33.7

Q ss_pred             CccccceeecCCCcceEEEEeC----CCCEEEEEEecCCC-CCChHHHHHHHhh
Q 043043          105 NFDRKLVMGKGAFGNVYRGTLR----NSMKVAVKRGETGS-GQGLPEFQTAIIV  153 (154)
Q Consensus       105 ~f~~~~~iG~g~~g~vy~g~l~----~g~~vaVK~l~~~~-~~~~~~f~~e~~~  153 (154)
                      +|...+.||+|.||.||+|...    ....+|+|.+.... ......|..|+.+
T Consensus         5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~   58 (267)
T cd05066           5 CIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASI   58 (267)
T ss_pred             HeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHH
Confidence            3555688999999999999863    22378999985322 2223567777754

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=95.71  E-value=0.016  Score=42.71  Aligned_cols=44  Identities=20%  Similarity=0.264  Sum_probs=33.5

Q ss_pred             ceeecCCCcceEEEEeC-CCCEEEEEEecCCCCCChHHHHHHHhh
Q 043043          110 LVMGKGAFGNVYRGTLR-NSMKVAVKRGETGSGQGLPEFQTAIIV  153 (154)
Q Consensus       110 ~~iG~g~~g~vy~g~l~-~g~~vaVK~l~~~~~~~~~~f~~e~~~  153 (154)
                      ..||.|+||.||++... ++..+++|.+..........+.+|+.+
T Consensus        27 ~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~   71 (297)
T cd06659          27 IKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVI   71 (297)
T ss_pred             hhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHH
Confidence            46999999999999864 678999999965444445567777654

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=95.71  E-value=0.0099  Score=42.81  Aligned_cols=48  Identities=25%  Similarity=0.441  Sum_probs=33.6

Q ss_pred             ccccceeecCCCcceEEEEe-CCCCEEEEEEecCCCCCChHHHHHHHhh
Q 043043          106 FDRKLVMGKGAFGNVYRGTL-RNSMKVAVKRGETGSGQGLPEFQTAIIV  153 (154)
Q Consensus       106 f~~~~~iG~g~~g~vy~g~l-~~g~~vaVK~l~~~~~~~~~~f~~e~~~  153 (154)
                      |.....||+|+||.||++.. .++..+|+|.+..........+.+|+.+
T Consensus        11 ~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~   59 (267)
T cd06645          11 FELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIM   59 (267)
T ss_pred             HHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHH
Confidence            33346699999999999986 4578899999864433333456666643

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=95.70  E-value=0.025  Score=41.80  Aligned_cols=50  Identities=22%  Similarity=0.278  Sum_probs=35.8

Q ss_pred             cCccccceeecCCCcceEEEEeC-CCCEEEEEEecCCCCC---ChHHHHHHHhh
Q 043043          104 HNFDRKLVMGKGAFGNVYRGTLR-NSMKVAVKRGETGSGQ---GLPEFQTAIIV  153 (154)
Q Consensus       104 ~~f~~~~~iG~g~~g~vy~g~l~-~g~~vaVK~l~~~~~~---~~~~f~~e~~~  153 (154)
                      ..|...+.||+|.||.||++... ++..|++|.+......   ...++.+|+++
T Consensus        15 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~   68 (307)
T cd06607          15 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRF   68 (307)
T ss_pred             hhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHH
Confidence            34666688999999999999874 5789999988533222   22457777754

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=95.69  E-value=0.0091  Score=43.67  Aligned_cols=50  Identities=22%  Similarity=0.352  Sum_probs=34.3

Q ss_pred             cCccccceeecCCCcceEEEEeCC------CCEEEEEEecCC-CCCChHHHHHHHhh
Q 043043          104 HNFDRKLVMGKGAFGNVYRGTLRN------SMKVAVKRGETG-SGQGLPEFQTAIIV  153 (154)
Q Consensus       104 ~~f~~~~~iG~g~~g~vy~g~l~~------g~~vaVK~l~~~-~~~~~~~f~~e~~~  153 (154)
                      .+|...+.||+|+||.||++...+      ...+|+|.+... ......++.+|+++
T Consensus        12 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~   68 (293)
T cd05053          12 DRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEM   68 (293)
T ss_pred             hHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHH
Confidence            345566789999999999998742      357899998543 22223457777754

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]

Probab=95.65  E-value=0.0047  Score=45.31  Aligned_cols=45  Identities=22%  Similarity=0.190  Sum_probs=33.9

Q ss_pred             cceeecCCCcceEEEEe-CCCCEEEEEEecCCC-CCChHHHHHHHhh
Q 043043          109 KLVMGKGAFGNVYRGTL-RNSMKVAVKRGETGS-GQGLPEFQTAIIV  153 (154)
Q Consensus       109 ~~~iG~g~~g~vy~g~l-~~g~~vaVK~l~~~~-~~~~~~f~~e~~~  153 (154)
                      ...||.|.||+|+|-.. +.|...|||++.... ...+.+|..|.+.
T Consensus        69 lg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~  115 (361)
T KOG1006|consen   69 LGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDT  115 (361)
T ss_pred             HHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHH
Confidence            35599999999999766 578999999996543 3445677777653

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=95.65  E-value=0.027  Score=41.47  Aligned_cols=48  Identities=17%  Similarity=0.243  Sum_probs=33.7

Q ss_pred             ccccceeecCCCcceEEEEeC-CCCEEEEEEecCC-CCCChHHHHHHHhh
Q 043043          106 FDRKLVMGKGAFGNVYRGTLR-NSMKVAVKRGETG-SGQGLPEFQTAIIV  153 (154)
Q Consensus       106 f~~~~~iG~g~~g~vy~g~l~-~g~~vaVK~l~~~-~~~~~~~f~~e~~~  153 (154)
                      |.....||+|+||.||++... ++..||+|.+... .......+.+|+.+
T Consensus         8 y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~   57 (301)
T cd07873           8 YIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSL   57 (301)
T ss_pred             eEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHH
Confidence            445577999999999999875 5688999998533 22223456666654

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=95.65  E-value=0.012  Score=45.13  Aligned_cols=57  Identities=18%  Similarity=0.205  Sum_probs=38.7

Q ss_pred             HHHHHhhcCccccceeecCCCcceEEEEeC-CCCEEEEEEecCC---CCCChHHHHHHHhh
Q 043043           97 VEIKFATHNFDRKLVMGKGAFGNVYRGTLR-NSMKVAVKRGETG---SGQGLPEFQTAIIV  153 (154)
Q Consensus        97 ~~l~~at~~f~~~~~iG~g~~g~vy~g~l~-~g~~vaVK~l~~~---~~~~~~~f~~e~~~  153 (154)
                      .++....++|.....||+|+||.||++... ++..+|+|.+...   .......|.+|+.+
T Consensus        36 ~~~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i   96 (371)
T cd05622          36 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDI   96 (371)
T ss_pred             hhcCcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHH
Confidence            344444567777889999999999999875 4678999998421   12223345566543

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=95.62  E-value=0.0078  Score=45.40  Aligned_cols=49  Identities=24%  Similarity=0.355  Sum_probs=32.6

Q ss_pred             CccccceeecCCCcceEEEEeC------CCCEEEEEEecCCCCC-ChHHHHHHHhh
Q 043043          105 NFDRKLVMGKGAFGNVYRGTLR------NSMKVAVKRGETGSGQ-GLPEFQTAIIV  153 (154)
Q Consensus       105 ~f~~~~~iG~g~~g~vy~g~l~------~g~~vaVK~l~~~~~~-~~~~f~~e~~~  153 (154)
                      +|...++||+|+||.||++...      .+..||+|++...... ....+..|+.+
T Consensus         8 ~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~   63 (337)
T cd05054           8 RLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKI   63 (337)
T ss_pred             HhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHH
Confidence            3455578999999999998642      2468999998643221 22346666654

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=95.61  E-value=0.014  Score=42.60  Aligned_cols=45  Identities=16%  Similarity=0.098  Sum_probs=33.1

Q ss_pred             cceeecCCCcceEEEEeC-CCCEEEEEEecCCC-CCChHHHHHHHhh
Q 043043          109 KLVMGKGAFGNVYRGTLR-NSMKVAVKRGETGS-GQGLPEFQTAIIV  153 (154)
Q Consensus       109 ~~~iG~g~~g~vy~g~l~-~g~~vaVK~l~~~~-~~~~~~f~~e~~~  153 (154)
                      .+.||+|.||+||++... ++..+|+|.+.... ......|.+|+++
T Consensus        10 ~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~   56 (284)
T cd06620          10 ISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQI   56 (284)
T ss_pred             HHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHH
Confidence            366999999999998864 57889999885432 2234578888764

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=95.60  E-value=0.024  Score=43.03  Aligned_cols=50  Identities=16%  Similarity=0.153  Sum_probs=35.4

Q ss_pred             cCccccceeecCCCcceEEEEeC-CCCEEEEEEecCC--CCCChHHHHHHHhh
Q 043043          104 HNFDRKLVMGKGAFGNVYRGTLR-NSMKVAVKRGETG--SGQGLPEFQTAIIV  153 (154)
Q Consensus       104 ~~f~~~~~iG~g~~g~vy~g~l~-~g~~vaVK~l~~~--~~~~~~~f~~e~~~  153 (154)
                      .+|...+.||+|+||.||++.-. .+..+|||.+...  .......+.+|+.+
T Consensus        24 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~   76 (364)
T cd07875          24 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVL   76 (364)
T ss_pred             cceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHH
Confidence            45666788999999999999853 5678999999532  22223456666654

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=95.59  E-value=0.018  Score=42.80  Aligned_cols=48  Identities=23%  Similarity=0.308  Sum_probs=34.5

Q ss_pred             ccccceeecCCCcceEEEEeC-CCCEEEEEEecCCCCC---ChHHHHHHHhh
Q 043043          106 FDRKLVMGKGAFGNVYRGTLR-NSMKVAVKRGETGSGQ---GLPEFQTAIIV  153 (154)
Q Consensus       106 f~~~~~iG~g~~g~vy~g~l~-~g~~vaVK~l~~~~~~---~~~~f~~e~~~  153 (154)
                      |...+.||+|+||.||++... ++..+++|.+......   ...++..|+++
T Consensus        27 f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~   78 (317)
T cd06635          27 FTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKF   78 (317)
T ss_pred             hhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHH
Confidence            556678999999999999874 5788999998532221   22457777654

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]

Probab=95.58  E-value=0.015  Score=46.09  Aligned_cols=34  Identities=32%  Similarity=0.420  Sum_probs=28.9

Q ss_pred             cCccccceeecCCCcceEEEEeC-CCCEEEEEEec
Q 043043          104 HNFDRKLVMGKGAFGNVYRGTLR-NSMKVAVKRGE  137 (154)
Q Consensus       104 ~~f~~~~~iG~g~~g~vy~g~l~-~g~~vaVK~l~  137 (154)
                      +.|....+||+|+||+||.++-+ .|..+|.|+|.
T Consensus       141 ~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~Lk  175 (550)
T KOG0605|consen  141 DDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILK  175 (550)
T ss_pred             ccchhheeeccccceeEEEEEEccCCcEEeeeccc
Confidence            55667788999999999999875 47899999994

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=95.52  E-value=0.019  Score=41.30  Aligned_cols=51  Identities=24%  Similarity=0.350  Sum_probs=38.0

Q ss_pred             hhcCccccceeecCCCcceEEEEeC-CCCEEEEEEecCCCCCChHHHHHHHhh
Q 043043          102 ATHNFDRKLVMGKGAFGNVYRGTLR-NSMKVAVKRGETGSGQGLPEFQTAIIV  153 (154)
Q Consensus       102 at~~f~~~~~iG~g~~g~vy~g~l~-~g~~vaVK~l~~~~~~~~~~f~~e~~~  153 (154)
                      ++++|.....||.|.+|.||++... ++..+++|.+..... ...+|.+|+++
T Consensus         4 ~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~e~~~   55 (275)
T cd06608           4 PTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIED-EEEEIKEEYNI   55 (275)
T ss_pred             chhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCch-hHHHHHHHHHH
Confidence            4566777788999999999999985 567899999864322 33567777754

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=95.52  E-value=0.028  Score=41.27  Aligned_cols=50  Identities=20%  Similarity=0.245  Sum_probs=35.1

Q ss_pred             cCccccceeecCCCcceEEEEeC-CCCEEEEEEecCCCCC--ChHHHHHHHhh
Q 043043          104 HNFDRKLVMGKGAFGNVYRGTLR-NSMKVAVKRGETGSGQ--GLPEFQTAIIV  153 (154)
Q Consensus       104 ~~f~~~~~iG~g~~g~vy~g~l~-~g~~vaVK~l~~~~~~--~~~~f~~e~~~  153 (154)
                      .+|.....||+|++|.||++... ++..+++|.+......  ....+.+|+++
T Consensus         8 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~   60 (311)
T cd07866           8 RDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKI   60 (311)
T ss_pred             ccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHH
Confidence            45666788999999999999874 5788999998533221  22345566553

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=95.52  E-value=0.016  Score=40.29  Aligned_cols=28  Identities=32%  Similarity=0.563  Sum_probs=23.6

Q ss_pred             ceeecCCCcceEEEEeC-CCCEEEEEEec
Q 043043          110 LVMGKGAFGNVYRGTLR-NSMKVAVKRGE  137 (154)
Q Consensus       110 ~~iG~g~~g~vy~g~l~-~g~~vaVK~l~  137 (154)
                      +.||+|.||+||++.-. .+..||.|+..
T Consensus         8 ekigegtygtvfkarn~~t~eivalkrvr   36 (292)
T KOG0662|consen    8 EKIGEGTYGTVFKARNRETHEIVALKRVR   36 (292)
T ss_pred             HhhcCCcceeeEecccCCccceEEEEEEe
Confidence            56999999999999864 46789999884

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=95.49  E-value=0.019  Score=42.49  Aligned_cols=49  Identities=22%  Similarity=0.459  Sum_probs=33.3

Q ss_pred             CccccceeecCCCcceEEEEeC-CCC--EEEEEEecCCC-CCChHHHHHHHhh
Q 043043          105 NFDRKLVMGKGAFGNVYRGTLR-NSM--KVAVKRGETGS-GQGLPEFQTAIIV  153 (154)
Q Consensus       105 ~f~~~~~iG~g~~g~vy~g~l~-~g~--~vaVK~l~~~~-~~~~~~f~~e~~~  153 (154)
                      +|...+.||+|+||.||++... ++.  .+++|.+.... .....+|.+|+++
T Consensus         8 ~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~   60 (303)
T cd05088           8 DIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEV   60 (303)
T ss_pred             hceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHH
Confidence            4555678999999999999874 343  46787775332 2233567778764

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=95.47  E-value=0.0044  Score=53.48  Aligned_cols=50  Identities=18%  Similarity=0.353  Sum_probs=34.8

Q ss_pred             cCccccceeecCCCcceEEEEeC-CCCEEEEEEecCCC-CCChHHHHHHHhh
Q 043043          104 HNFDRKLVMGKGAFGNVYRGTLR-NSMKVAVKRGETGS-GQGLPEFQTAIIV  153 (154)
Q Consensus       104 ~~f~~~~~iG~g~~g~vy~g~l~-~g~~vaVK~l~~~~-~~~~~~f~~e~~~  153 (154)
                      ..|.+-.+||+|+||.||+.+=. ||+..|||++.... ...-....+|+.+
T Consensus       479 ~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~  530 (1351)
T KOG1035|consen  479 NDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKL  530 (1351)
T ss_pred             hhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHH
Confidence            44666678999999999998743 78999999995432 2222334556654

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=95.44  E-value=0.026  Score=41.07  Aligned_cols=47  Identities=26%  Similarity=0.302  Sum_probs=33.4

Q ss_pred             cccceeecCCCcceEEEEe-----CCCCEEEEEEecCCC-CCChHHHHHHHhh
Q 043043          107 DRKLVMGKGAFGNVYRGTL-----RNSMKVAVKRGETGS-GQGLPEFQTAIIV  153 (154)
Q Consensus       107 ~~~~~iG~g~~g~vy~g~l-----~~g~~vaVK~l~~~~-~~~~~~f~~e~~~  153 (154)
                      .....||+|+||.||.+..     .++..||+|.+.... ......|.+|+++
T Consensus         7 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~   59 (283)
T cd05080           7 KKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINI   59 (283)
T ss_pred             eeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHH
Confidence            4457799999999987654     356789999986432 2234567788764

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>PF03109 ABC1: ABC1 family; InterPro: IPR004147 This entry includes ABC1 from yeast [] and AarF from Escherichia coli []

Probab=95.41  E-value=0.0052  Score=39.57  Aligned_cols=30  Identities=27%  Similarity=0.377  Sum_probs=27.0

Q ss_pred             ceeecCCCcceEEEEeCCCCEEEEEEecCC
Q 043043          110 LVMGKGAFGNVYRGTLRNSMKVAVKRGETG  139 (154)
Q Consensus       110 ~~iG~g~~g~vy~g~l~~g~~vaVK~l~~~  139 (154)
                      +-|+.++.|.||+|++++|..||||...+.
T Consensus        17 ~PlasASiaQVh~a~l~~g~~VaVKV~rP~   46 (119)
T PF03109_consen   17 EPLASASIAQVHRARLKDGEEVAVKVQRPG   46 (119)
T ss_pred             chhhheehhhheeeeecccchhhhhhcchH
Confidence            559999999999999999999999998643

These proteins have a nuclear or mitochondrial subcellular location in eukaryotes. The exact molecular functions of these proteins is not clear, however yeast ABC1 suppresses a cytochrome b mRNA translation defect and is essential for the electron transfer in the bc 1 complex [] and E. coli AarF is required for ubiquinone production []. It has been suggested that members of the ABC1 family are novel chaperonins []. These proteins are unrelated to the ABC transporter proteins.

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=95.39  E-value=0.016  Score=42.14  Aligned_cols=48  Identities=29%  Similarity=0.443  Sum_probs=32.7

Q ss_pred             ccccceeecCCCcceEEEEeCCC------CEEEEEEecCCC-CCChHHHHHHHhh
Q 043043          106 FDRKLVMGKGAFGNVYRGTLRNS------MKVAVKRGETGS-GQGLPEFQTAIIV  153 (154)
Q Consensus       106 f~~~~~iG~g~~g~vy~g~l~~g------~~vaVK~l~~~~-~~~~~~f~~e~~~  153 (154)
                      |.....||+|+||.||+|.....      ..+++|.+.... .....+|.+|+.+
T Consensus         7 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~   61 (283)
T cd05048           7 VRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAEL   61 (283)
T ss_pred             cchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHH
Confidence            34446799999999999987432      468999985332 2223467777754

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=95.38  E-value=0.033  Score=39.83  Aligned_cols=50  Identities=22%  Similarity=0.377  Sum_probs=36.9

Q ss_pred             cCccccceeecCCCcceEEEEeC-CCCEEEEEEecCCCCCChHHHHHHHhh
Q 043043          104 HNFDRKLVMGKGAFGNVYRGTLR-NSMKVAVKRGETGSGQGLPEFQTAIIV  153 (154)
Q Consensus       104 ~~f~~~~~iG~g~~g~vy~g~l~-~g~~vaVK~l~~~~~~~~~~f~~e~~~  153 (154)
                      .+|.....||.|.+|.||++... ++..+++|.+..........+.+|+++
T Consensus         3 ~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~   53 (262)
T cd06613           3 EDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISM   53 (262)
T ss_pred             cceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHH
Confidence            34555678999999999999874 467899999865444345667777654

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=95.37  E-value=0.022  Score=41.35  Aligned_cols=58  Identities=22%  Similarity=0.330  Sum_probs=41.4

Q ss_pred             ccHHHHHHhhcCccccceeecCCCcceEEEEeC-CCCEEEEEEecCCCCCChHHHHHHHh
Q 043043           94 IPYVEIKFATHNFDRKLVMGKGAFGNVYRGTLR-NSMKVAVKRGETGSGQGLPEFQTAII  152 (154)
Q Consensus        94 ~~~~~l~~at~~f~~~~~iG~g~~g~vy~g~l~-~g~~vaVK~l~~~~~~~~~~f~~e~~  152 (154)
                      .++.++..+...|.....||.|+||.||++... ++..+|+|.+.... ....++..|+.
T Consensus         6 ~~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~-~~~~~~~~e~~   64 (282)
T cd06636           6 IDLSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE-DEEEEIKLEIN   64 (282)
T ss_pred             hhhhhhcChhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecCh-HHHHHHHHHHH
Confidence            455666667777877789999999999999874 56889999885332 22345555554

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=95.36  E-value=0.025  Score=41.40  Aligned_cols=49  Identities=18%  Similarity=0.222  Sum_probs=33.9

Q ss_pred             CccccceeecCCCcceEEEEeC-CCCEEEEEEecCCC--CCChHHHHHHHhh
Q 043043          105 NFDRKLVMGKGAFGNVYRGTLR-NSMKVAVKRGETGS--GQGLPEFQTAIIV  153 (154)
Q Consensus       105 ~f~~~~~iG~g~~g~vy~g~l~-~g~~vaVK~l~~~~--~~~~~~f~~e~~~  153 (154)
                      +|...+.||.|.+|.||++..+ ++..+++|.+....  ......+.+|+++
T Consensus         6 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~   57 (293)
T cd07843           6 EYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINI   57 (293)
T ss_pred             hhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHH
Confidence            3455577999999999999986 57889999995322  1122345566643

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=95.36  E-value=0.038  Score=40.56  Aligned_cols=49  Identities=18%  Similarity=0.302  Sum_probs=33.9

Q ss_pred             CccccceeecCCCcceEEEEeC-CCCEEEEEEecCCC--CCChHHHHHHHhh
Q 043043          105 NFDRKLVMGKGAFGNVYRGTLR-NSMKVAVKRGETGS--GQGLPEFQTAIIV  153 (154)
Q Consensus       105 ~f~~~~~iG~g~~g~vy~g~l~-~g~~vaVK~l~~~~--~~~~~~f~~e~~~  153 (154)
                      +|.....||+|+||.||++... ++..+|+|.+....  ......+.+|+.+
T Consensus        13 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~   64 (310)
T cd07865          13 KYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKI   64 (310)
T ss_pred             heEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHH
Confidence            4666688999999999999874 57899999985322  2222334556543

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=95.35  E-value=0.028  Score=40.44  Aligned_cols=49  Identities=27%  Similarity=0.394  Sum_probs=34.6

Q ss_pred             CccccceeecCCCcceEEEEeC-CCCEEEEEEecCC--C---CCChHHHHHHHhh
Q 043043          105 NFDRKLVMGKGAFGNVYRGTLR-NSMKVAVKRGETG--S---GQGLPEFQTAIIV  153 (154)
Q Consensus       105 ~f~~~~~iG~g~~g~vy~g~l~-~g~~vaVK~l~~~--~---~~~~~~f~~e~~~  153 (154)
                      +|...+.||+|++|.||++... ++..+++|.+...  .   ......|.+|+++
T Consensus         3 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~   57 (264)
T cd06653           3 NWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQL   57 (264)
T ss_pred             ceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHH
Confidence            4566688999999999999864 5789999987422  1   1122467777754

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=95.35  E-value=0.019  Score=41.94  Aligned_cols=49  Identities=20%  Similarity=0.272  Sum_probs=33.7

Q ss_pred             CccccceeecCCCcceEEEEeCC-----------------CCEEEEEEecCCC-CCChHHHHHHHhh
Q 043043          105 NFDRKLVMGKGAFGNVYRGTLRN-----------------SMKVAVKRGETGS-GQGLPEFQTAIIV  153 (154)
Q Consensus       105 ~f~~~~~iG~g~~g~vy~g~l~~-----------------g~~vaVK~l~~~~-~~~~~~f~~e~~~  153 (154)
                      .|.....||+|+||.||++...+                 +..+|+|.+.... .....+|.+|+++
T Consensus         6 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~   72 (296)
T cd05051           6 PLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKI   72 (296)
T ss_pred             hCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHH
Confidence            34555779999999999987642                 2458999985332 2234567777754

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=95.33  E-value=0.04  Score=41.28  Aligned_cols=50  Identities=18%  Similarity=0.191  Sum_probs=35.7

Q ss_pred             cCccccceeecCCCcceEEEEeC-CCCEEEEEEecCC--CCCChHHHHHHHhh
Q 043043          104 HNFDRKLVMGKGAFGNVYRGTLR-NSMKVAVKRGETG--SGQGLPEFQTAIIV  153 (154)
Q Consensus       104 ~~f~~~~~iG~g~~g~vy~g~l~-~g~~vaVK~l~~~--~~~~~~~f~~e~~~  153 (154)
                      .+|...+.||.|++|.||++... +|..+++|++...  .......+..|+.+
T Consensus         5 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~   57 (334)
T cd07855           5 SRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKI   57 (334)
T ss_pred             hceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHH
Confidence            45666678999999999999864 5789999998532  22233456666654

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=95.33  E-value=0.018  Score=41.92  Aligned_cols=44  Identities=27%  Similarity=0.427  Sum_probs=30.8

Q ss_pred             ceeecCCCcceEEEEeCC------CCEEEEEEecCCCCC-ChHHHHHHHhh
Q 043043          110 LVMGKGAFGNVYRGTLRN------SMKVAVKRGETGSGQ-GLPEFQTAIIV  153 (154)
Q Consensus       110 ~~iG~g~~g~vy~g~l~~------g~~vaVK~l~~~~~~-~~~~f~~e~~~  153 (154)
                      +.||+|+||.||+|...+      +..||+|++...... ....|..|+.+
T Consensus        11 ~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~   61 (283)
T cd05091          11 EELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMM   61 (283)
T ss_pred             HHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHH
Confidence            569999999999998632      467999999643222 23457777654

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=95.32  E-value=0.034  Score=46.10  Aligned_cols=49  Identities=29%  Similarity=0.302  Sum_probs=34.4

Q ss_pred             CccccceeecCCCcceEEEEeC-CCCEEEEEEecCCCCCC---hHHHHHHHhh
Q 043043          105 NFDRKLVMGKGAFGNVYRGTLR-NSMKVAVKRGETGSGQG---LPEFQTAIIV  153 (154)
Q Consensus       105 ~f~~~~~iG~g~~g~vy~g~l~-~g~~vaVK~l~~~~~~~---~~~f~~e~~~  153 (154)
                      +|.....||+|.||.||++... .+..||+|.+.......   ...+..|+.+
T Consensus         5 ~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~   57 (669)
T cd05610           5 EFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDA   57 (669)
T ss_pred             CEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHH
Confidence            4555678999999999999885 57899999985332111   2456666543

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>PF06365 CD34_antigen: CD34/Podocalyxin family; InterPro: IPR013836 This family consists of several mammalian CD34 antigen proteins

Probab=95.28  E-value=0.076  Score=37.29  Aligned_cols=25  Identities=12%  Similarity=0.247  Sum_probs=12.7

Q ss_pred             eeEEEehhHHHHHHHHHHHHHHHHH
Q 043043           21 FMAVVGSVLACSVLICILEIVLSFV   45 (154)
Q Consensus        21 ~~~ii~~~v~~~vll~i~~~~~~~~   45 (154)
                      ..++|++++.+.++++++++...|+
T Consensus        99 ~~~lI~lv~~g~~lLla~~~~~~Y~  123 (202)
T PF06365_consen   99 YPTLIALVTSGSFLLLAILLGAGYC  123 (202)
T ss_pred             ceEEEehHHhhHHHHHHHHHHHHHH
Confidence            4467776655544444444444333

The CD34 antigen is a human leukocyte membrane protein expressed specifically by lymphohematopoietic progenitor cells. CD34 is a phosphoprotein. Activation of protein kinase C (PKC) has been found to enhance CD34 phosphorylation [, ]. This family contains several eukaryotic podocalyxin proteins. Podocalyxin is a major membrane protein of the glomerular epithelium and is thought to be involved in maintenance of the architecture of the foot processes and filtration slits characteristic of this unique epithelium by virtue of its high negative charge. Podocalyxin functions as an anti-adhesin that maintains an open filtration pathway between neighbouring foot processes in the glomerular epithelium by charge repulsion [].

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=95.28  E-value=0.018  Score=41.62  Aligned_cols=49  Identities=27%  Similarity=0.396  Sum_probs=34.1

Q ss_pred             CccccceeecCCCcceEEEEeCC------CCEEEEEEecCCC-CCChHHHHHHHhh
Q 043043          105 NFDRKLVMGKGAFGNVYRGTLRN------SMKVAVKRGETGS-GQGLPEFQTAIIV  153 (154)
Q Consensus       105 ~f~~~~~iG~g~~g~vy~g~l~~------g~~vaVK~l~~~~-~~~~~~f~~e~~~  153 (154)
                      +|...+.||+|+||.||++...+      +..+|+|.+.... .....+|.+|+.+
T Consensus         7 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~   62 (277)
T cd05032           7 KITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASV   62 (277)
T ss_pred             HeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHH
Confidence            45556789999999999998742      3579999985432 2223467777654

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=95.27  E-value=0.024  Score=41.72  Aligned_cols=49  Identities=22%  Similarity=0.398  Sum_probs=33.3

Q ss_pred             CccccceeecCCCcceEEEEeCC-CC--EEEEEEecCCC-CCChHHHHHHHhh
Q 043043          105 NFDRKLVMGKGAFGNVYRGTLRN-SM--KVAVKRGETGS-GQGLPEFQTAIIV  153 (154)
Q Consensus       105 ~f~~~~~iG~g~~g~vy~g~l~~-g~--~vaVK~l~~~~-~~~~~~f~~e~~~  153 (154)
                      +|.-..+||+|+||.||++...+ +.  .+++|.+.... ......|.+|+++
T Consensus         3 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~   55 (297)
T cd05089           3 DIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEV   55 (297)
T ss_pred             cceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHH
Confidence            35556789999999999998853 32  47888875322 2223567777754

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=95.27  E-value=0.014  Score=42.39  Aligned_cols=46  Identities=30%  Similarity=0.466  Sum_probs=32.7

Q ss_pred             ccceeecCCCcceEEEEeC-CCCEEEEEEecCCC-CCChHHHHHHHhh
Q 043043          108 RKLVMGKGAFGNVYRGTLR-NSMKVAVKRGETGS-GQGLPEFQTAIIV  153 (154)
Q Consensus       108 ~~~~iG~g~~g~vy~g~l~-~g~~vaVK~l~~~~-~~~~~~f~~e~~~  153 (154)
                      ..+.||+|.||.||+|... ++..||+|.+.... ......|.+|+++
T Consensus         8 ~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~   55 (277)
T cd06642           8 KLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITV   55 (277)
T ss_pred             HHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHH
Confidence            3456999999999999874 46789999885332 2223467777754

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=95.25  E-value=0.017  Score=42.43  Aligned_cols=49  Identities=24%  Similarity=0.301  Sum_probs=33.7

Q ss_pred             CccccceeecCCCcceEEEEeC-----------------CCCEEEEEEecCCC-CCChHHHHHHHhh
Q 043043          105 NFDRKLVMGKGAFGNVYRGTLR-----------------NSMKVAVKRGETGS-GQGLPEFQTAIIV  153 (154)
Q Consensus       105 ~f~~~~~iG~g~~g~vy~g~l~-----------------~g~~vaVK~l~~~~-~~~~~~f~~e~~~  153 (154)
                      +|.-.+.||+|+||.||++...                 ++..+|+|.+.... .....+|.+|+.+
T Consensus         6 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~   72 (296)
T cd05095           6 RLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKI   72 (296)
T ss_pred             hceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHH
Confidence            4555678999999999987532                 23468999986432 2234578888764

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=95.24  E-value=0.021  Score=41.53  Aligned_cols=44  Identities=30%  Similarity=0.465  Sum_probs=32.4

Q ss_pred             ceeecCCCcceEEEEeCC-CCEEEEEEecCCCCCChHHHHHHHhh
Q 043043          110 LVMGKGAFGNVYRGTLRN-SMKVAVKRGETGSGQGLPEFQTAIIV  153 (154)
Q Consensus       110 ~~iG~g~~g~vy~g~l~~-g~~vaVK~l~~~~~~~~~~f~~e~~~  153 (154)
                      ..||+|+||.||++.... +..+++|.+..........|.+|+++
T Consensus        11 ~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~   55 (282)
T cd06643          11 GELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDI   55 (282)
T ss_pred             hhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHH
Confidence            559999999999999864 56788988854433334567777754

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=95.24  E-value=0.029  Score=42.40  Aligned_cols=50  Identities=16%  Similarity=0.130  Sum_probs=35.0

Q ss_pred             cCccccceeecCCCcceEEEEeC-CCCEEEEEEecCCC--CCChHHHHHHHhh
Q 043043          104 HNFDRKLVMGKGAFGNVYRGTLR-NSMKVAVKRGETGS--GQGLPEFQTAIIV  153 (154)
Q Consensus       104 ~~f~~~~~iG~g~~g~vy~g~l~-~g~~vaVK~l~~~~--~~~~~~f~~e~~~  153 (154)
                      .+|...+.||+|+||.||++.-. .+..+|+|.+....  ......+.+|+.+
T Consensus        17 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~   69 (355)
T cd07874          17 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVL   69 (355)
T ss_pred             hceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHH
Confidence            45666788999999999998753 46789999995422  2223456666654

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=95.21  E-value=0.027  Score=43.53  Aligned_cols=47  Identities=21%  Similarity=0.306  Sum_probs=35.6

Q ss_pred             ccceeecCCCcceEEEEeCC-CCEEEEEEecCCC---CCChHHHHHHHhhC
Q 043043          108 RKLVMGKGAFGNVYRGTLRN-SMKVAVKRGETGS---GQGLPEFQTAIIVL  154 (154)
Q Consensus       108 ~~~~iG~g~~g~vy~g~l~~-g~~vaVK~l~~~~---~~~~~~f~~e~~~l  154 (154)
                      ....||+|.||.||+++-+. |..+|+|.+....   ..+.....+|+.+|
T Consensus        39 l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il   89 (382)
T KOG0032|consen   39 LGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAIL   89 (382)
T ss_pred             ehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHH
Confidence            33679999999999999875 8899999995332   22345788888764

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=95.20  E-value=0.049  Score=38.97  Aligned_cols=50  Identities=26%  Similarity=0.395  Sum_probs=35.6

Q ss_pred             cCccccceeecCCCcceEEEEeC-CCCEEEEEEecCCCC-----CChHHHHHHHhh
Q 043043          104 HNFDRKLVMGKGAFGNVYRGTLR-NSMKVAVKRGETGSG-----QGLPEFQTAIIV  153 (154)
Q Consensus       104 ~~f~~~~~iG~g~~g~vy~g~l~-~g~~vaVK~l~~~~~-----~~~~~f~~e~~~  153 (154)
                      ++|...+.||+|++|.||++... ++..+++|.+.....     .....+.+|+++
T Consensus         2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~   57 (263)
T cd06625           2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQL   57 (263)
T ss_pred             CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHH
Confidence            35777789999999999999864 578999998853211     122456667654

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=95.18  E-value=0.039  Score=39.49  Aligned_cols=45  Identities=33%  Similarity=0.420  Sum_probs=33.5

Q ss_pred             ccccceeecCCCcceEEEEeCCCCEEEEEEecCCCCCChHHHHHHHhh
Q 043043          106 FDRKLVMGKGAFGNVYRGTLRNSMKVAVKRGETGSGQGLPEFQTAIIV  153 (154)
Q Consensus       106 f~~~~~iG~g~~g~vy~g~l~~g~~vaVK~l~~~~~~~~~~f~~e~~~  153 (154)
                      |...+.||+|+||.||++..+ |..+++|.+...  .....|..|+.+
T Consensus         8 ~~~~~~lg~g~~~~v~~~~~~-~~~~~~k~~~~~--~~~~~~~~e~~~   52 (256)
T cd05082           8 LKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKND--ATAQAFLAEASV   52 (256)
T ss_pred             CeeeeeecccCCCeEEEEEEc-CCcEEEEEeCCC--chHHHHHHHHHH
Confidence            455578999999999999875 678999988532  224567777754

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=95.16  E-value=0.044  Score=44.83  Aligned_cols=36  Identities=31%  Similarity=0.520  Sum_probs=29.4

Q ss_pred             cCccccceeecCCCcceEEEEeC-CCCEEEEEEecCC
Q 043043          104 HNFDRKLVMGKGAFGNVYRGTLR-NSMKVAVKRGETG  139 (154)
Q Consensus       104 ~~f~~~~~iG~g~~g~vy~g~l~-~g~~vaVK~l~~~  139 (154)
                      .+|....+||+|.||.|+.+.+. ++...|||.|...
T Consensus       368 ~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~  404 (694)
T KOG0694|consen  368 DDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKG  404 (694)
T ss_pred             cceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeecc
Confidence            45666678999999999999995 4678999999543

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=95.13  E-value=0.024  Score=41.15  Aligned_cols=48  Identities=29%  Similarity=0.476  Sum_probs=33.1

Q ss_pred             ccccceeecCCCcceEEEEeCC-C----CEEEEEEecCCCC-CChHHHHHHHhh
Q 043043          106 FDRKLVMGKGAFGNVYRGTLRN-S----MKVAVKRGETGSG-QGLPEFQTAIIV  153 (154)
Q Consensus       106 f~~~~~iG~g~~g~vy~g~l~~-g----~~vaVK~l~~~~~-~~~~~f~~e~~~  153 (154)
                      |...+.||+|+||.||+|...+ |    ..+|+|.+..... ....+|.+|+++
T Consensus         9 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~   62 (279)
T cd05057           9 LEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYV   62 (279)
T ss_pred             cEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHH
Confidence            4445789999999999998742 2    2589998854322 223567777754

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=95.12  E-value=0.018  Score=46.74  Aligned_cols=48  Identities=29%  Similarity=0.401  Sum_probs=34.8

Q ss_pred             ccccceeecCCCcceEEEEe-CCCCEEEEEEecCCCCCC---hHHHHHHHhh
Q 043043          106 FDRKLVMGKGAFGNVYRGTL-RNSMKVAVKRGETGSGQG---LPEFQTAIIV  153 (154)
Q Consensus       106 f~~~~~iG~g~~g~vy~g~l-~~g~~vaVK~l~~~~~~~---~~~f~~e~~~  153 (154)
                      |.+-+-||.|.||.||.+.- .+...||||+......++   +.+.+.|+..
T Consensus        28 f~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrF   79 (948)
T KOG0577|consen   28 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRF   79 (948)
T ss_pred             HHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHH
Confidence            55666799999999998875 456789999997544443   3455666654

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=95.08  E-value=0.028  Score=40.97  Aligned_cols=48  Identities=27%  Similarity=0.404  Sum_probs=34.1

Q ss_pred             ccccceeecCCCcceEEEEe-----CCCCEEEEEEecCCC-CCChHHHHHHHhh
Q 043043          106 FDRKLVMGKGAFGNVYRGTL-----RNSMKVAVKRGETGS-GQGLPEFQTAIIV  153 (154)
Q Consensus       106 f~~~~~iG~g~~g~vy~g~l-----~~g~~vaVK~l~~~~-~~~~~~f~~e~~~  153 (154)
                      |.....||+|+||.||.+.+     .++..+|+|.+.... ......|.+|+++
T Consensus         6 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~   59 (284)
T cd05079           6 LKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEI   59 (284)
T ss_pred             hhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHH
Confidence            44557799999999999975     246789999986442 2223567777754

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=95.07  E-value=0.024  Score=42.51  Aligned_cols=49  Identities=22%  Similarity=0.319  Sum_probs=33.7

Q ss_pred             CccccceeecCCCcceEEEEeC-CCCEEEEEEecCC--CCCChHHHHHHHhh
Q 043043          105 NFDRKLVMGKGAFGNVYRGTLR-NSMKVAVKRGETG--SGQGLPEFQTAIIV  153 (154)
Q Consensus       105 ~f~~~~~iG~g~~g~vy~g~l~-~g~~vaVK~l~~~--~~~~~~~f~~e~~~  153 (154)
                      +|...+.||+|+||.||+|... ++..+++|++...  .......+..|+.+
T Consensus         8 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~   59 (337)
T cd07852           8 KYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMF   59 (337)
T ss_pred             HHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHH
Confidence            3555577999999999999875 5788999988421  22223445566643

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=95.05  E-value=0.023  Score=42.06  Aligned_cols=50  Identities=28%  Similarity=0.345  Sum_probs=34.5

Q ss_pred             cCccccceeecCCCcceEEEEeC------CCCEEEEEEecCCCC-CChHHHHHHHhh
Q 043043          104 HNFDRKLVMGKGAFGNVYRGTLR------NSMKVAVKRGETGSG-QGLPEFQTAIIV  153 (154)
Q Consensus       104 ~~f~~~~~iG~g~~g~vy~g~l~------~g~~vaVK~l~~~~~-~~~~~f~~e~~~  153 (154)
                      ++|...+.||+|+||.||++..-      .+..+|+|.+..... .....|.+|+++
T Consensus        35 ~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~   91 (302)
T cd05055          35 NNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKI   91 (302)
T ss_pred             HHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHH
Confidence            34666788999999999998741      235799999864322 223457777764

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]

Probab=95.04  E-value=0.023  Score=46.59  Aligned_cols=51  Identities=29%  Similarity=0.382  Sum_probs=36.8

Q ss_pred             cCccccceeecCCCcceEEEEeC----C----CCEEEEEEecCC-CCCChHHHHHHHhhC
Q 043043          104 HNFDRKLVMGKGAFGNVYRGTLR----N----SMKVAVKRGETG-SGQGLPEFQTAIIVL  154 (154)
Q Consensus       104 ~~f~~~~~iG~g~~g~vy~g~l~----~----g~~vaVK~l~~~-~~~~~~~f~~e~~~l  154 (154)
                      +++.-.+.||+|.||.|++|.+.    .    ...||||++... .......+..|+++|
T Consensus       296 ~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m  355 (609)
T KOG0200|consen  296 ENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVL  355 (609)
T ss_pred             hhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHH
Confidence            34444458999999999999873    1    457999999643 334456788888764

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=95.01  E-value=0.028  Score=41.51  Aligned_cols=49  Identities=33%  Similarity=0.553  Sum_probs=32.4

Q ss_pred             CccccceeecCCCcceEEEEeC-CCC----EEEEEEecCCCC-CChHHHHHHHhh
Q 043043          105 NFDRKLVMGKGAFGNVYRGTLR-NSM----KVAVKRGETGSG-QGLPEFQTAIIV  153 (154)
Q Consensus       105 ~f~~~~~iG~g~~g~vy~g~l~-~g~----~vaVK~l~~~~~-~~~~~f~~e~~~  153 (154)
                      .|...+.||+|+||.||++... ++.    .+|+|.+..... ....+|.+|+.+
T Consensus         8 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~   62 (303)
T cd05110           8 ELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALI   62 (303)
T ss_pred             hceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHH
Confidence            3555678999999999999863 333    578888853322 222356677653

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=94.98  E-value=0.018  Score=42.22  Aligned_cols=49  Identities=24%  Similarity=0.306  Sum_probs=33.0

Q ss_pred             ccccceeecCCCcceEEEEeCC---------------CCEEEEEEecCCC-CCChHHHHHHHhhC
Q 043043          106 FDRKLVMGKGAFGNVYRGTLRN---------------SMKVAVKRGETGS-GQGLPEFQTAIIVL  154 (154)
Q Consensus       106 f~~~~~iG~g~~g~vy~g~l~~---------------g~~vaVK~l~~~~-~~~~~~f~~e~~~l  154 (154)
                      |.-.+.||+|+||.||++...+               ...||+|.+.... .....+|.+|+++|
T Consensus         7 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l   71 (295)
T cd05097           7 LRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIM   71 (295)
T ss_pred             CeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHH
Confidence            4445779999999999887532               1358999986432 22235688887653

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=94.97  E-value=0.021  Score=41.80  Aligned_cols=48  Identities=29%  Similarity=0.342  Sum_probs=34.0

Q ss_pred             ccccceeecCCCcceEEEEeC------CCCEEEEEEecCCCCCChHHHHHHHhh
Q 043043          106 FDRKLVMGKGAFGNVYRGTLR------NSMKVAVKRGETGSGQGLPEFQTAIIV  153 (154)
Q Consensus       106 f~~~~~iG~g~~g~vy~g~l~------~g~~vaVK~l~~~~~~~~~~f~~e~~~  153 (154)
                      |.-.+.||+|+||.||++...      ++..+++|.+..........|.+|+++
T Consensus         7 ~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~   60 (291)
T cd05094           7 IVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAEL   60 (291)
T ss_pred             eEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHH
Confidence            455578999999999999752      345688988864433334568888764

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>PF14575 EphA2_TM: Ephrin type-A receptor 2 transmembrane domain; PDB: 3KUL_A 2XVD_A 2VX1_A 2VWV_A 2VX0_A 2VWY_A 2VWZ_A 2VWW_A 2VWU_A 2VWX_A

Probab=94.96  E-value=0.0032  Score=37.15  Aligned_cols=20  Identities=15%  Similarity=0.127  Sum_probs=12.5

Q ss_pred             CcccccHHHHHHhhcCcccc
Q 043043           90 LGLKIPYVEIKFATHNFDRK  109 (154)
Q Consensus        90 ~~~~~~~~~l~~at~~f~~~  109 (154)
                      ....+||+|-..|...|..+
T Consensus        53 YIDP~TYEDP~qAV~eFAkE   72 (75)
T PF14575_consen   53 YIDPHTYEDPNQAVREFAKE   72 (75)
T ss_dssp             ---GGGSSSHHHHHHHCSSB
T ss_pred             ecCcccccCHHHHHHHHHhh
Confidence            34467888888887777643

...

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=94.95  E-value=0.053  Score=40.71  Aligned_cols=49  Identities=20%  Similarity=0.252  Sum_probs=34.2

Q ss_pred             CccccceeecCCCcceEEEEe-CCCCEEEEEEecCC--CCCChHHHHHHHhh
Q 043043          105 NFDRKLVMGKGAFGNVYRGTL-RNSMKVAVKRGETG--SGQGLPEFQTAIIV  153 (154)
Q Consensus       105 ~f~~~~~iG~g~~g~vy~g~l-~~g~~vaVK~l~~~--~~~~~~~f~~e~~~  153 (154)
                      .|.....||+|+||.||++.- .++..||+|.+...  .......+.+|+.+
T Consensus         6 ~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~   57 (337)
T cd07858           6 KYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKL   57 (337)
T ss_pred             ceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHH
Confidence            455567899999999999985 45789999998532  22223455566543

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=94.89  E-value=0.048  Score=40.81  Aligned_cols=28  Identities=25%  Similarity=0.418  Sum_probs=24.3

Q ss_pred             ceeecCCCcceEEEEeC-CCCEEEEEEec
Q 043043          110 LVMGKGAFGNVYRGTLR-NSMKVAVKRGE  137 (154)
Q Consensus       110 ~~iG~g~~g~vy~g~l~-~g~~vaVK~l~  137 (154)
                      +.||.|+||.||++.-. ++..+|+|.+.
T Consensus        15 ~~ig~G~~g~vy~~~~~~~~~~vaiK~~~   43 (335)
T PTZ00024         15 AHLGEGTYGKVEKAYDTLTGKIVAIKKVK   43 (335)
T ss_pred             hcccCCCceeEEEEEECCCCCeEEEEEee
Confidence            56999999999999864 67899999884

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=94.83  E-value=0.032  Score=41.17  Aligned_cols=48  Identities=21%  Similarity=0.338  Sum_probs=32.9

Q ss_pred             ccccceeecCCCcceEEEEeC--------CCCEEEEEEecCC-CCCChHHHHHHHhh
Q 043043          106 FDRKLVMGKGAFGNVYRGTLR--------NSMKVAVKRGETG-SGQGLPEFQTAIIV  153 (154)
Q Consensus       106 f~~~~~iG~g~~g~vy~g~l~--------~g~~vaVK~l~~~-~~~~~~~f~~e~~~  153 (154)
                      +.....||+|+||.||++...        ++..+++|.+... ......++.+|+.+
T Consensus        17 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~   73 (304)
T cd05101          17 LTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEM   73 (304)
T ss_pred             eeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHH
Confidence            455577999999999999741        2357999998533 22234567777654

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=94.81  E-value=0.05  Score=41.16  Aligned_cols=50  Identities=16%  Similarity=0.169  Sum_probs=35.9

Q ss_pred             cCccccceeecCCCcceEEEEeC-CCCEEEEEEecCC--CCCChHHHHHHHhh
Q 043043          104 HNFDRKLVMGKGAFGNVYRGTLR-NSMKVAVKRGETG--SGQGLPEFQTAIIV  153 (154)
Q Consensus       104 ~~f~~~~~iG~g~~g~vy~g~l~-~g~~vaVK~l~~~--~~~~~~~f~~e~~~  153 (154)
                      ..|.....||+|+||.||++.-. ++..+|+|.+...  ......++.+|+++
T Consensus        16 ~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~   68 (353)
T cd07850          16 KRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVL   68 (353)
T ss_pred             cceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHH
Confidence            45677788999999999999864 6789999998532  22223456667654

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=94.78  E-value=0.042  Score=40.03  Aligned_cols=47  Identities=26%  Similarity=0.462  Sum_probs=30.0

Q ss_pred             ccccceeecCCCcceEEEEeC-CCC----EEEEEEecCCCCC-ChHHHHHHHh
Q 043043          106 FDRKLVMGKGAFGNVYRGTLR-NSM----KVAVKRGETGSGQ-GLPEFQTAII  152 (154)
Q Consensus       106 f~~~~~iG~g~~g~vy~g~l~-~g~----~vaVK~l~~~~~~-~~~~f~~e~~  152 (154)
                      |...+.||+|+||.||+|... ++.    .+++|.+...... ...++..|+.
T Consensus         9 ~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~   61 (279)
T cd05111           9 LRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHML   61 (279)
T ss_pred             ceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHH
Confidence            444577999999999999873 343    4778887533221 2245555543

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=94.77  E-value=0.032  Score=40.52  Aligned_cols=48  Identities=29%  Similarity=0.484  Sum_probs=33.8

Q ss_pred             ccccceeecCCCcceEEEEeC-CCCEEEEEEecCCC-CCChHHHHHHHhh
Q 043043          106 FDRKLVMGKGAFGNVYRGTLR-NSMKVAVKRGETGS-GQGLPEFQTAIIV  153 (154)
Q Consensus       106 f~~~~~iG~g~~g~vy~g~l~-~g~~vaVK~l~~~~-~~~~~~f~~e~~~  153 (154)
                      |+..+.||.|.||.||+|... ++..+|+|.+.... ......|.+|+.+
T Consensus         6 y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~   55 (277)
T cd06640           6 FTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITV   55 (277)
T ss_pred             hhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHH
Confidence            344466999999999999874 57889999885322 2223567777654

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=94.77  E-value=0.033  Score=39.82  Aligned_cols=45  Identities=29%  Similarity=0.420  Sum_probs=33.1

Q ss_pred             ccccceeecCCCcceEEEEeCCCCEEEEEEecCCCCCChHHHHHHHhh
Q 043043          106 FDRKLVMGKGAFGNVYRGTLRNSMKVAVKRGETGSGQGLPEFQTAIIV  153 (154)
Q Consensus       106 f~~~~~iG~g~~g~vy~g~l~~g~~vaVK~l~~~~~~~~~~f~~e~~~  153 (154)
                      |...+.||+|+||.||++.. ++..+++|.+....  ....|.+|+.+
T Consensus         8 ~~~~~~lg~g~~g~v~~~~~-~~~~~~iK~~~~~~--~~~~~~~e~~~   52 (254)
T cd05083           8 LTLGEIIGEGEFGAVLQGEY-TGQKVAVKNIKCDV--TAQAFLEETAV   52 (254)
T ss_pred             ceeeeeeccCCCCceEeccc-CCCceEEEeecCcc--hHHHHHHHHHH
Confidence            44457899999999999986 56789999985321  23567777754

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=94.76  E-value=0.035  Score=40.80  Aligned_cols=44  Identities=23%  Similarity=0.317  Sum_probs=32.3

Q ss_pred             ceeecCCCcceEEEEeC-CCCEEEEEEecCCCCCChHHHHHHHhh
Q 043043          110 LVMGKGAFGNVYRGTLR-NSMKVAVKRGETGSGQGLPEFQTAIIV  153 (154)
Q Consensus       110 ~~iG~g~~g~vy~g~l~-~g~~vaVK~l~~~~~~~~~~f~~e~~~  153 (154)
                      ..||+|+||.||++... ++..+|+|.+..........|.+|+.+
T Consensus        28 ~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~   72 (292)
T cd06658          28 IKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVI   72 (292)
T ss_pred             hcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHH
Confidence            45899999999999864 578899999864433334567777653

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>smart00090 RIO RIO-like kinase

Probab=94.62  E-value=0.04  Score=39.72  Aligned_cols=33  Identities=24%  Similarity=0.095  Sum_probs=27.9

Q ss_pred             ccccceeecCCCcceEEEE--eCCCCEEEEEEecC
Q 043043          106 FDRKLVMGKGAFGNVYRGT--LRNSMKVAVKRGET  138 (154)
Q Consensus       106 f~~~~~iG~g~~g~vy~g~--l~~g~~vaVK~l~~  138 (154)
                      +.-...||+|++|.||++.  ..+|..||+|.+..
T Consensus        30 ~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~   64 (237)
T smart00090       30 SAIGGCISTGKEANVYHALDFDGSGKERAVKIYRT   64 (237)
T ss_pred             HHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEc
Confidence            3445679999999999998  67899999999853

>PF15345 TMEM51: Transmembrane protein 51

Probab=94.59  E-value=0.13  Score=36.65  Aligned_cols=33  Identities=21%  Similarity=0.248  Sum_probs=18.2

Q ss_pred             eeEEEehhHHHHHHHHHHHHHHHHHHHHhcCCC
Q 043043           21 FMAVVGSVLACSVLICILEIVLSFVLIWRKQKP   53 (154)
Q Consensus        21 ~~~ii~~~v~~~vll~i~~~~~~~~~~~r~~~~   53 (154)
                      ...++-++||+.++++++.+|+.++.+||+++.
T Consensus        57 t~SVAyVLVG~Gv~LLLLSICL~IR~KRr~rq~   89 (233)
T PF15345_consen   57 TFSVAYVLVGSGVALLLLSICLSIRDKRRRRQG   89 (233)
T ss_pred             eEEEEEehhhHHHHHHHHHHHHHHHHHHHHhhc
Confidence            334444566666666666666655544444433

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=94.58  E-value=0.035  Score=41.11  Aligned_cols=48  Identities=25%  Similarity=0.345  Sum_probs=33.7

Q ss_pred             ccccceeecCCCcceEEEEeC-CCCEEEEEEecCCC---CCChHHHHHHHhh
Q 043043          106 FDRKLVMGKGAFGNVYRGTLR-NSMKVAVKRGETGS---GQGLPEFQTAIIV  153 (154)
Q Consensus       106 f~~~~~iG~g~~g~vy~g~l~-~g~~vaVK~l~~~~---~~~~~~f~~e~~~  153 (154)
                      |+..+.||+|++|.||+|... ++..+++|.+....   .....+|.+|+++
T Consensus        17 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~   68 (308)
T cd06634          17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRF   68 (308)
T ss_pred             HHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHH
Confidence            455567999999999999874 56789999985321   1223456777654

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=94.51  E-value=0.06  Score=40.56  Aligned_cols=50  Identities=20%  Similarity=0.234  Sum_probs=35.1

Q ss_pred             cCccccceeecCCCcceEEEEeC-CCCEEEEEEecCC--CCCChHHHHHHHhh
Q 043043          104 HNFDRKLVMGKGAFGNVYRGTLR-NSMKVAVKRGETG--SGQGLPEFQTAIIV  153 (154)
Q Consensus       104 ~~f~~~~~iG~g~~g~vy~g~l~-~g~~vaVK~l~~~--~~~~~~~f~~e~~~  153 (154)
                      ++|.....||+|.+|.||++... ++..+|+|.+...  .......+.+|+.+
T Consensus        15 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~   67 (343)
T cd07851          15 DRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRL   67 (343)
T ss_pred             CceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHH
Confidence            45666788999999999999885 5688999998532  12223445566643

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>PF01034 Syndecan: Syndecan domain; InterPro: IPR001050 The syndecans are transmembrane proteoglycans which are involved in the organisation of cytoskeleton and/or actin microfilaments, and have important roles as cell surface receptors during cell-cell and/or cell-matrix interactions [, ]

Probab=94.47  E-value=0.011  Score=33.40  Aligned_cols=9  Identities=11%  Similarity=0.091  Sum_probs=0.0

Q ss_pred             EehhHHHHH
Q 043043           25 VGSVLACSV   33 (154)
Q Consensus        25 i~~~v~~~v   33 (154)
                      +++++|+++
T Consensus        12 aavIaG~Vv   20 (64)
T PF01034_consen   12 AAVIAGGVV   20 (64)
T ss_dssp             ---------
T ss_pred             HHHHHHHHH
Confidence            444444333

Structurally, these proteins consist of four separate domains: A signal sequence; An extracellular domain (ectodomain) of variable length whose sequence is not evolutionary conserved in the various forms of syndecans. The ectodomain contains the sites of attachment of the heparan sulphate glycosaminoglycan side chains; A transmembrane region; A highly conserved cytoplasmic domain of about 30 to 35 residues, which could interact with cytoskeletal proteins. The proteins known to belong to this family are: Syndecan 1. Syndecan 2 or fibroglycan. Syndecan 3 or neuroglycan or N-syndecan. Syndecan 4 or amphiglycan or ryudocan. Drosophila syndecan. Caenorhabditis elegans probable syndecan (F57C7.3). Syndecan-4, a transmembrane heparan sulphate proteoglycan, is a coreceptor with integrins in cell adhesion. It has been suggested to form a ternary signalling complex with protein kinase Calpha and phosphatidylinositol 4,5-bisphosphate (PIP2). Structural studies have demonstrated that the cytoplasmic domain undergoes a conformational transition and forms a symmetric dimer in the presence of phospholipid activator PIP2, and whose overall structure in solution exhibits a twisted clamp shape having a cavity in the centre of dimeric interface. In addition, it has been observed that the syndecan-4 variable domain interacts, strongly, not only with fatty acyl groups but also the anionic head group of PIP2. These findings indicate that PIP2 promotes oligomerisation of the syndecan-4 cytoplasmic domain for transmembrane signalling and cell-matrix adhesion [, ].; GO: 0008092 cytoskeletal protein binding, 0016020 membrane; PDB: 1EJQ_B 1EJP_B 1YBO_C 1OBY_Q.

>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed

Probab=94.47  E-value=0.07  Score=43.12  Aligned_cols=34  Identities=21%  Similarity=0.259  Sum_probs=29.0

Q ss_pred             CccccceeecCCCcceEEEEeCC-CCEEEEEEecCC
Q 043043          105 NFDRKLVMGKGAFGNVYRGTLRN-SMKVAVKRGETG  139 (154)
Q Consensus       105 ~f~~~~~iG~g~~g~vy~g~l~~-g~~vaVK~l~~~  139 (154)
                      .|+. .-||+|++|.||++++.+ |..||||.+...
T Consensus       121 ~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~  155 (537)
T PRK04750        121 DFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPD  155 (537)
T ss_pred             hcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcc
Confidence            3554 569999999999999987 999999999644

>PF05454 DAG1: Dystroglycan (Dystrophin-associated glycoprotein 1); InterPro: IPR008465 Dystroglycan is one of the dystrophin-associated glycoproteins, which is encoded by a 5

Probab=94.47  E-value=0.011  Score=43.87  Aligned_cols=21  Identities=10%  Similarity=0.181  Sum_probs=0.0

Q ss_pred             HHHHHHHHHHHHHHHhcCCCC
Q 043043           34 LICILEIVLSFVLIWRKQKPD   54 (154)
Q Consensus        34 ll~i~~~~~~~~~~~r~~~~~   54 (154)
                      +++|+++++++|+||||+.+.
T Consensus       158 iLLIA~iIa~icyrrkR~GK~  178 (290)
T PF05454_consen  158 ILLIAGIIACICYRRKRKGKM  178 (290)
T ss_dssp             ---------------------
T ss_pred             HHHHHHHHHHHhhhhhhcccc
Confidence            333444455555555554433

5 kb transcript in Homo sapiens. The protein product is cleaved into two non-covalently associated subunits, [alpha] (N-terminal) and [beta] (C-terminal). In skeletal muscle the dystroglycan complex works as a transmembrane linkage between the extracellular matrix and the cytoskeleton [alpha]-dystroglycan is extracellular and binds to merosin ([alpha]-2 laminin) in the basement membrane, while [beta]-dystroglycan is a transmembrane protein and binds to dystrophin, which is a large rod-like cytoskeletal protein, absent in Duchenne muscular dystrophy patients. Dystrophin binds to intracellular actin cables. In this way, the dystroglycan complex, which links the extracellular matrix to the intracellular actin cables, is thought to provide structural integrity in muscle tissues. The dystroglycan complex is also known to serve as an agrin receptor in muscle, where it may regulate agrin-induced acetylcholine receptor clustering at the neuromuscular junction. There is also evidence which suggests the function of dystroglycan as a part of the signal transduction pathway because it is shown that Grb2, a mediator of the Ras-related signal pathway, can interact with the cytoplasmic domain of dystroglycan. In general, aberrant expression of dystrophin-associated protein complex underlies the pathogenesis of Duchenne muscular dystrophy, Becker muscular dystrophy and severe childhood autosomal recessive muscular dystrophy. Interestingly, no genetic disease has been described for either [alpha]- or [beta]-dystroglycan. Dystroglycan is widely distributed in non-muscle tissues as well as in muscle tissues. During epithelial morphogenesis of kidney, the dystroglycan complex is shown to act as a receptor for the basement membrane. Dystroglycan expression in Mus musculus brain and neural retina has also been reported. However, the physiological role of dystroglycan in non-muscle tissues has remained unclear [].; PDB: 1EG4_P.

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=94.45  E-value=0.031  Score=41.52  Aligned_cols=49  Identities=22%  Similarity=0.365  Sum_probs=33.0

Q ss_pred             CccccceeecCCCcceEEEEeC--------CCCEEEEEEecCCC-CCChHHHHHHHhh
Q 043043          105 NFDRKLVMGKGAFGNVYRGTLR--------NSMKVAVKRGETGS-GQGLPEFQTAIIV  153 (154)
Q Consensus       105 ~f~~~~~iG~g~~g~vy~g~l~--------~g~~vaVK~l~~~~-~~~~~~f~~e~~~  153 (154)
                      +|...+.||+|+||.||++...        ....+|+|.+.... .....+|..|+.+
T Consensus        13 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~   70 (314)
T cd05099          13 RLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMEL   70 (314)
T ss_pred             HeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHH
Confidence            4555688999999999998642        23568999886332 2223457777654

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=94.44  E-value=0.1  Score=38.74  Aligned_cols=48  Identities=27%  Similarity=0.326  Sum_probs=33.2

Q ss_pred             ccccceeecCCCcceEEEEeC-CCCEEEEEEecCCCCCC---hHHHHHHHhh
Q 043043          106 FDRKLVMGKGAFGNVYRGTLR-NSMKVAVKRGETGSGQG---LPEFQTAIIV  153 (154)
Q Consensus       106 f~~~~~iG~g~~g~vy~g~l~-~g~~vaVK~l~~~~~~~---~~~f~~e~~~  153 (154)
                      |...+.||+|+||.||+|... ++..+++|.+.......   ...+.+|+++
T Consensus        23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~   74 (313)
T cd06633          23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKF   74 (313)
T ss_pred             hhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHH
Confidence            344467999999999999864 57889999986432222   2356666654

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>PF02439 Adeno_E3_CR2: Adenovirus E3 region protein CR2; InterPro: IPR003470 Early region 3 (E3) of human adenoviruses (Ads) codes for proteins that appear to control viral interactions with the host []

Probab=94.39  E-value=0.11  Score=26.20  Aligned_cols=26  Identities=15%  Similarity=0.149  Sum_probs=11.6

Q ss_pred             eEEEehhHHHHHHHHHHHHHHHHHHHH
Q 043043           22 MAVVGSVLACSVLICILEIVLSFVLIW   48 (154)
Q Consensus        22 ~~ii~~~v~~~vll~i~~~~~~~~~~~   48 (154)
                      +++++++++.++ +.+.++...|++||
T Consensus         7 aIIv~V~vg~~i-iii~~~~YaCcykk   32 (38)
T PF02439_consen    7 AIIVAVVVGMAI-IIICMFYYACCYKK   32 (38)
T ss_pred             hHHHHHHHHHHH-HHHHHHHHHHHHcc
Confidence            445555555444 44443333344333

This region called CR1 (conserved region 1) [] is found three times in Human adenovirus 19 (a subgroup D adenovirus) 49 kDa protein in the E3 region. CR1 is also found in the 20.1 Kd protein of subgroup B adenoviruses. The function of this 80 amino acid region is unknown. This region is probably a divergent immunoglobulin domain.

>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=94.38  E-value=0.068  Score=41.90  Aligned_cols=48  Identities=21%  Similarity=0.232  Sum_probs=35.4

Q ss_pred             cccceeecCCCcceEEEEe-CCCCEEEEEEecCCCCCC-hHHHHHHHhhC
Q 043043          107 DRKLVMGKGAFGNVYRGTL-RNSMKVAVKRGETGSGQG-LPEFQTAIIVL  154 (154)
Q Consensus       107 ~~~~~iG~g~~g~vy~g~l-~~g~~vaVK~l~~~~~~~-~~~f~~e~~~l  154 (154)
                      ....+||.|..+.||++.. +.+..||||+++.+..+. .+...+|+..|
T Consensus        29 eL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~m   78 (516)
T KOG0582|consen   29 ELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTM   78 (516)
T ss_pred             eEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHh
Confidence            3446799999999999975 667999999997543333 36677777543

>PF02009 Rifin_STEVOR: Rifin/stevor family; InterPro: IPR002858 Malaria is still a major cause of mortality in many areas of the world

Probab=94.34  E-value=0.027  Score=42.05  Aligned_cols=26  Identities=23%  Similarity=0.423  Sum_probs=11.6

Q ss_pred             ehhHHHHHHHHHHHHHHHHHHHHhcC
Q 043043           26 GSVLACSVLICILEIVLSFVLIWRKQ   51 (154)
Q Consensus        26 ~~~v~~~vll~i~~~~~~~~~~~r~~   51 (154)
                      +.++++++++++++++.+.+++||++
T Consensus       260 aSiiaIliIVLIMvIIYLILRYRRKK  285 (299)
T PF02009_consen  260 ASIIAILIIVLIMVIIYLILRYRRKK  285 (299)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            33444444444444444444444433

Plasmodium falciparum causes the most severe human form of the disease and is responsible for most fatalities. Severe cases of malaria can occur when the parasite invades and then proliferates within red blood cell erythrocytes. The parasite produces many variant antigenic proteins, encoded by multigene families, which are present on the surface of the infected erythrocyte and play important roles in virulence. A crucial survival mechanism for the malaria parasite is its ability to evade the immune response by switching these variant surface antigens. The high virulence of P. falciparum relative to other malarial parasites is in large part due to the fact that in this organism many of these surface antigens mediate the binding of infected erythrocytes to the vascular endothelium (cytoadherence) and non-infected erythrocytes (rosetting). This can lead to the accumulation of infected cells in the vasculature of a variety of organs, blocking the blood flow and reducing the oxygen supply. Clinical symptoms of severe infection can include fever, progressive anaemia, multi-organ dysfunction and coma. For more information see []. Several multicopy gene families have been described in Plasmodium falciparum, including the stevor family of subtelomeric open reading frames and the rif interspersed repetitive elements. Both families contain three predicted transmembrane segments. It has been proposed that stevor and rif are members of a larger superfamily that code for variant surface antigens [].

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=94.34  E-value=0.049  Score=40.23  Aligned_cols=48  Identities=23%  Similarity=0.309  Sum_probs=32.5

Q ss_pred             ccccceeecCCCcceEEEEeC--------CCCEEEEEEecCCC-CCChHHHHHHHhh
Q 043043          106 FDRKLVMGKGAFGNVYRGTLR--------NSMKVAVKRGETGS-GQGLPEFQTAIIV  153 (154)
Q Consensus       106 f~~~~~iG~g~~g~vy~g~l~--------~g~~vaVK~l~~~~-~~~~~~f~~e~~~  153 (154)
                      +.-.+.||+|+||.||++...        ....+|+|.+.... .....++..|+++
T Consensus        20 ~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~   76 (307)
T cd05098          20 LVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEM   76 (307)
T ss_pred             eEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHH
Confidence            455577999999999998752        23569999986432 2223457777654

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated

Probab=94.30  E-value=0.17  Score=40.89  Aligned_cols=27  Identities=19%  Similarity=0.226  Sum_probs=20.9

Q ss_pred             cCccccceeecCCCcceEEEEeCCCCE
Q 043043          104 HNFDRKLVMGKGAFGNVYRGTLRNSMK  130 (154)
Q Consensus       104 ~~f~~~~~iG~g~~g~vy~g~l~~g~~  130 (154)
                      ..+...+.||+|+||.||+|.+.+...
T Consensus       333 ~~~~~~~~iG~G~~g~Vy~~~~~~~~~  359 (535)
T PRK09605        333 RRKIPDHLIGKGAEADIKKGEYLGRDA  359 (535)
T ss_pred             cccCccceeccCCcEEEEEEeecCccc
Confidence            334556889999999999999865443

>PHA03212 serine/threonine kinase US3; Provisional

Probab=94.19  E-value=0.071  Score=41.21  Aligned_cols=44  Identities=18%  Similarity=0.179  Sum_probs=32.6

Q ss_pred             cCccccceeecCCCcceEEEEe-CCCCEEEEEEecCCCCCChHHHHHHHhh
Q 043043          104 HNFDRKLVMGKGAFGNVYRGTL-RNSMKVAVKRGETGSGQGLPEFQTAIIV  153 (154)
Q Consensus       104 ~~f~~~~~iG~g~~g~vy~g~l-~~g~~vaVK~l~~~~~~~~~~f~~e~~~  153 (154)
                      .+|.....||+|+||.||++.- ..+..||+|....      ..+.+|+++
T Consensus        92 ~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~~------~~~~~E~~i  136 (391)
T PHA03212         92 AGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQR------GGTATEAHI  136 (391)
T ss_pred             CCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechhh------hhhHHHHHH
Confidence            4567777899999999999976 4578899997632      235566654

>PF06697 DUF1191: Protein of unknown function (DUF1191); InterPro: IPR010605 This family contains hypothetical plant proteins of unknown function

Probab=94.15  E-value=0.069  Score=39.27  Aligned_cols=32  Identities=22%  Similarity=0.220  Sum_probs=14.4

Q ss_pred             CCCcceeEEE-ehhHHHHHHHHHHHHHHHHHHH
Q 043043           16 PKKKHFMAVV-GSVLACSVLICILEIVLSFVLI   47 (154)
Q Consensus        16 ~~~~~~~~ii-~~~v~~~vll~i~~~~~~~~~~   47 (154)
                      +++...|.++ +++.|++++.++..+++++.+.
T Consensus       207 ~~~~~~W~iv~g~~~G~~~L~ll~~lv~~~vr~  239 (278)
T PF06697_consen  207 RKRSWWWKIVVGVVGGVVLLGLLSLLVAMLVRY  239 (278)
T ss_pred             CCcceeEEEEEEehHHHHHHHHHHHHHHhhhhh
Confidence            4455555544 4455544444443333333333

>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]

Probab=93.94  E-value=0.086  Score=42.70  Aligned_cols=30  Identities=33%  Similarity=0.436  Sum_probs=25.2

Q ss_pred             cceeecCCCcceEEEEe-CCCCEEEEEEecC
Q 043043          109 KLVMGKGAFGNVYRGTL-RNSMKVAVKRGET  138 (154)
Q Consensus       109 ~~~iG~g~~g~vy~g~l-~~g~~vaVK~l~~  138 (154)
                      ..+||+|.||.|.++.= ..+..||||.+..
T Consensus       191 ~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN  221 (586)
T KOG0667|consen  191 LEVLGKGSFGQVVKAYDHKTGEIVAIKIIKN  221 (586)
T ss_pred             EEEecccccceeEEEEecCCCcEEEEEeecc
Confidence            45799999999999875 4578999999964

>PHA02882 putative serine/threonine kinase; Provisional

Probab=93.94  E-value=0.081  Score=38.92  Aligned_cols=32  Identities=22%  Similarity=0.391  Sum_probs=23.7

Q ss_pred             CccccceeecCCCcceEEEEeCCC----CEEEEEEe
Q 043043          105 NFDRKLVMGKGAFGNVYRGTLRNS----MKVAVKRG  136 (154)
Q Consensus       105 ~f~~~~~iG~g~~g~vy~g~l~~g----~~vaVK~l  136 (154)
                      .|...++||+|+||.||++...+.    ..+++|..
T Consensus        13 ~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~   48 (294)
T PHA02882         13 EWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIE   48 (294)
T ss_pred             ceEEeeEEecCCCceEEEEEEcCCcccccceEEEec
Confidence            455667899999999999998553    34556543

>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=93.75  E-value=0.065  Score=40.56  Aligned_cols=55  Identities=16%  Similarity=0.261  Sum_probs=41.1

Q ss_pred             cHHHHHHhhcCccccceeecCCCcceEEEE-eCCCCEEEEEEecCCCCCChHHHHHHHhhC
Q 043043           95 PYVEIKFATHNFDRKLVMGKGAFGNVYRGT-LRNSMKVAVKRGETGSGQGLPEFQTAIIVL  154 (154)
Q Consensus        95 ~~~~l~~at~~f~~~~~iG~g~~g~vy~g~-l~~g~~vaVK~l~~~~~~~~~~f~~e~~~l  154 (154)
                      +++|+..-|.     .+||+|.|+.|-.++ +..|...|||.++....-.+....+|++++
T Consensus        74 ~F~d~YkLt~-----e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f  129 (463)
T KOG0607|consen   74 KFEDMYKLTS-----ELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETF  129 (463)
T ss_pred             hHHHHHHhHH-----HHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHH
Confidence            4677777663     569999999998765 467889999999755444556777888753

>PF02480 Herpes_gE: Alphaherpesvirus glycoprotein E; InterPro: IPR003404 Glycoprotein E (gE) of Alphaherpesvirus forms a complex with glycoprotein I (gI), functioning as an immunoglobulin G (IgG) Fc binding protein

Probab=93.65  E-value=0.019  Score=45.13  Aligned_cols=22  Identities=32%  Similarity=0.620  Sum_probs=0.0

Q ss_pred             EEEehhHHHHHHHHHHHHHHHH
Q 043043           23 AVVGSVLACSVLICILEIVLSF   44 (154)
Q Consensus        23 ~ii~~~v~~~vll~i~~~~~~~   44 (154)
                      ++++++++++++++++++++++
T Consensus       353 ~~l~vVlgvavlivVv~viv~v  374 (439)
T PF02480_consen  353 ALLGVVLGVAVLIVVVGVIVWV  374 (439)
T ss_dssp             ----------------------
T ss_pred             chHHHHHHHHHHHHHHHHHhhe
Confidence            3444444444444444444333

gE is involved in virus spread but is not essential for propagation [].; GO: 0016020 membrane; PDB: 2GJ7_F 2GIY_B.

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=93.52  E-value=0.069  Score=46.14  Aligned_cols=51  Identities=14%  Similarity=0.210  Sum_probs=36.2

Q ss_pred             cCccccceeecCCCcceEEEEeC-CCCEEEEEEecCCC--CCChHHHHHHHhhC
Q 043043          104 HNFDRKLVMGKGAFGNVYRGTLR-NSMKVAVKRGETGS--GQGLPEFQTAIIVL  154 (154)
Q Consensus       104 ~~f~~~~~iG~g~~g~vy~g~l~-~g~~vaVK~l~~~~--~~~~~~f~~e~~~l  154 (154)
                      ..|.....||+|+||.||++... .+..+|+|.+....  ......|..|+.+|
T Consensus        13 ~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL   66 (1021)
T PTZ00266         13 NEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVM   66 (1021)
T ss_pred             CCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHH
Confidence            45666678999999999999874 45678999885332  22235677887653

>PF05393 Hum_adeno_E3A: Human adenovirus early E3A glycoprotein; InterPro: IPR008652 This family consists of several early glycoproteins (E3A), from human adenovirus type 2

Probab=93.37  E-value=0.16  Score=30.53  Aligned_cols=10  Identities=0%  Similarity=-0.090  Sum_probs=3.8

Q ss_pred             HHHHHHHHhc
Q 043043           41 VLSFVLIWRK   50 (154)
Q Consensus        41 ~~~~~~~~r~   50 (154)
                      .+.||..|+|
T Consensus        51 wfvCC~kRkr   60 (94)
T PF05393_consen   51 WFVCCKKRKR   60 (94)
T ss_pred             HHHHHHHhhh
Confidence            3333433333

; GO: 0016021 integral to membrane

>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]

Probab=93.32  E-value=0.015  Score=43.59  Aligned_cols=47  Identities=23%  Similarity=0.418  Sum_probs=34.3

Q ss_pred             ccccceeecCCCcceEEEEe-CCCCEEEEEEecCCCCCChHHHHHHHhhC
Q 043043          106 FDRKLVMGKGAFGNVYRGTL-RNSMKVAVKRGETGSGQGLPEFQTAIIVL  154 (154)
Q Consensus       106 f~~~~~iG~g~~g~vy~g~l-~~g~~vaVK~l~~~~~~~~~~f~~e~~~l  154 (154)
                      |+-...||+|.||.||++.- ..|..+|+|.+...+  +..+.+.|+.+|
T Consensus        35 FDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~s--DLQEIIKEISIM   82 (502)
T KOG0574|consen   35 FDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVDT--DLQEIIKEISIM   82 (502)
T ss_pred             HHHHHHhcCCcchHHHHHHHhccCcEEEEEecCccc--hHHHHHHHHHHH
Confidence            34446699999999999876 468899999985432  345677777654

>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]

Probab=93.26  E-value=0.067  Score=40.62  Aligned_cols=33  Identities=30%  Similarity=0.491  Sum_probs=27.4

Q ss_pred             CccccceeecCCCcceEEEEeC-CCCEEEEEEec
Q 043043          105 NFDRKLVMGKGAFGNVYRGTLR-NSMKVAVKRGE  137 (154)
Q Consensus       105 ~f~~~~~iG~g~~g~vy~g~l~-~g~~vaVK~l~  137 (154)
                      .|..-++||+|+||.||..+-. .+...|.|.|+
T Consensus        26 dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~   59 (357)
T KOG0598|consen   26 DFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLK   59 (357)
T ss_pred             heeeeeeeeccCCceEEEEEEcccCceeehhhhh
Confidence            4666789999999999988764 47789999995

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=93.13  E-value=0.12  Score=38.80  Aligned_cols=48  Identities=21%  Similarity=0.335  Sum_probs=32.0

Q ss_pred             ccccceeecCCCcceEEEEeC--------CCCEEEEEEecCCC-CCChHHHHHHHhh
Q 043043          106 FDRKLVMGKGAFGNVYRGTLR--------NSMKVAVKRGETGS-GQGLPEFQTAIIV  153 (154)
Q Consensus       106 f~~~~~iG~g~~g~vy~g~l~--------~g~~vaVK~l~~~~-~~~~~~f~~e~~~  153 (154)
                      +.-...||+|+||.||++...        ....+|+|.+.... .....+|.+|+++
T Consensus        14 ~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~   70 (334)
T cd05100          14 LTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEM   70 (334)
T ss_pred             eeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHH
Confidence            344577999999999998742        12368999885322 2223567777754

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>PHA03211 serine/threonine kinase US3; Provisional

Probab=93.11  E-value=0.13  Score=40.84  Aligned_cols=32  Identities=25%  Similarity=0.431  Sum_probs=26.3

Q ss_pred             CccccceeecCCCcceEEEEeCC-CCEEEEEEe
Q 043043          105 NFDRKLVMGKGAFGNVYRGTLRN-SMKVAVKRG  136 (154)
Q Consensus       105 ~f~~~~~iG~g~~g~vy~g~l~~-g~~vaVK~l  136 (154)
                      +|.....||+|+||.||++..++ +..||+|..
T Consensus       170 gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~  202 (461)
T PHA03211        170 GFAIHRALTPGSEGCVFESSHPDYPQRVVVKAG  202 (461)
T ss_pred             CeEEEEEEccCCCeEEEEEEECCCCCEEEEecc
Confidence            46666789999999999999864 678999964

>PF13908 Shisa: Wnt and FGF inhibitory regulator

Probab=92.95  E-value=0.1  Score=35.97  Aligned_cols=23  Identities=9%  Similarity=0.160  Sum_probs=10.9

Q ss_pred             ceeEEEehhHHHHHHHHHHHHHH
Q 043043           20 HFMAVVGSVLACSVLICILEIVL   42 (154)
Q Consensus        20 ~~~~ii~~~v~~~vll~i~~~~~   42 (154)
                      ...++++++++++++++++++++
T Consensus        77 ~~~iivgvi~~Vi~Iv~~Iv~~~   99 (179)
T PF13908_consen   77 ITGIIVGVICGVIAIVVLIVCFC   99 (179)
T ss_pred             eeeeeeehhhHHHHHHHhHhhhe
Confidence            44455666555554443333333

>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]

Probab=92.76  E-value=0.06  Score=41.59  Aligned_cols=50  Identities=20%  Similarity=0.248  Sum_probs=36.3

Q ss_pred             hhcCccccceeecCCCcceEEEEeCC----CCEEEEEEecCCCCCChHHHHHHHhh
Q 043043          102 ATHNFDRKLVMGKGAFGNVYRGTLRN----SMKVAVKRGETGSGQGLPEFQTAIIV  153 (154)
Q Consensus       102 at~~f~~~~~iG~g~~g~vy~g~l~~----g~~vaVK~l~~~~~~~~~~f~~e~~~  153 (154)
                      -.+.+...+.||+|.|+.||++.+..    ...||+|.+...+.  .....+|+++
T Consensus        34 ~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts~--p~ri~~El~~   87 (418)
T KOG1167|consen   34 ISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTSS--PSRILNELEM   87 (418)
T ss_pred             hhhhhhhhccccccchhhhhhhhHhhhccccceEeeeecccccC--chHHHHHHHH
Confidence            34557788999999999999998743    46899999965443  3345566654

>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]

Probab=92.43  E-value=0.21  Score=38.95  Aligned_cols=45  Identities=29%  Similarity=0.319  Sum_probs=31.5

Q ss_pred             ceeecCCCcceEEEEe-CCCCEEEEEEecCC-----CC--CChHHHHHHHhhC
Q 043043          110 LVMGKGAFGNVYRGTL-RNSMKVAVKRGETG-----SG--QGLPEFQTAIIVL  154 (154)
Q Consensus       110 ~~iG~g~~g~vy~g~l-~~g~~vaVK~l~~~-----~~--~~~~~f~~e~~~l  154 (154)
                      +.||+|+||.|-++.= ..|..||||.+...     +.  .......+|+++|
T Consensus       178 ~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieIL  230 (475)
T KOG0615|consen  178 KTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEIL  230 (475)
T ss_pred             eeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHH
Confidence            4699999999999875 46889999999432     11  1122346888775

>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=92.35  E-value=0.2  Score=37.64  Aligned_cols=34  Identities=24%  Similarity=0.368  Sum_probs=25.7

Q ss_pred             CccccceeecCCCcceEEEEeCCC--CEEEEEEecC
Q 043043          105 NFDRKLVMGKGAFGNVYRGTLRNS--MKVAVKRGET  138 (154)
Q Consensus       105 ~f~~~~~iG~g~~g~vy~g~l~~g--~~vaVK~l~~  138 (154)
                      ++.....||+|+||.||.+.-.+.  ..+|+|.-..
T Consensus        19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~   54 (322)
T KOG1164|consen   19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKK   54 (322)
T ss_pred             ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEe
Confidence            566678899999999999986443  3677776643

>PTZ00046 rifin; Provisional

Probab=92.30  E-value=0.09  Score=40.03  Aligned_cols=25  Identities=28%  Similarity=0.452  Sum_probs=11.1

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHhcCC
Q 043043           28 VLACSVLICILEIVLSFVLIWRKQK   52 (154)
Q Consensus        28 ~v~~~vll~i~~~~~~~~~~~r~~~   52 (154)
                      ++++++++++++++.+..|+||+++
T Consensus       321 iiAIvVIVLIMvIIYLILRYRRKKK  345 (358)
T PTZ00046        321 IVAIVVIVLIMVIIYLILRYRRKKK  345 (358)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhcch
Confidence            3334444444444444444444443

>PF03302 VSP: Giardia variant-specific surface protein; InterPro: IPR005127 During infection, the intestinal protozoan parasite Giardia lamblia virus undergoes continuous antigenic variation which is determined by diversification of the parasite's major surface antigen, named VSP (variant surface protein)

Probab=92.12  E-value=0.12  Score=40.28  Aligned_cols=31  Identities=19%  Similarity=0.088  Sum_probs=20.3

Q ss_pred             CCCCcceeEEEehhHHHHHHHHHHHHHHHHH
Q 043043           15 GPKKKHFMAVVGSVLACSVLICILEIVLSFV   45 (154)
Q Consensus        15 ~~~~~~~~~ii~~~v~~~vll~i~~~~~~~~   45 (154)
                      .++..+.+.|++|.|+++++|.-++-||.||
T Consensus       360 n~s~LstgaIaGIsvavvvvVgglvGfLcWw  390 (397)
T PF03302_consen  360 NKSGLSTGAIAGISVAVVVVVGGLVGFLCWW  390 (397)
T ss_pred             ccccccccceeeeeehhHHHHHHHHHHHhhh
Confidence            3445577889999888777776444444443

>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=92.01  E-value=0.38  Score=35.22  Aligned_cols=41  Identities=24%  Similarity=0.489  Sum_probs=30.6

Q ss_pred             HHHHHHhhcCccccceeecCCCcceEEEE-eCCCCEEEEEEec
Q 043043           96 YVEIKFATHNFDRKLVMGKGAFGNVYRGT-LRNSMKVAVKRGE  137 (154)
Q Consensus        96 ~~~l~~at~~f~~~~~iG~g~~g~vy~g~-l~~g~~vaVK~l~  137 (154)
                      ..++..+ ..+.-.+.||.|+||.+|.|. +.+|..||+|.=.
T Consensus         8 ~~~~iv~-gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es   49 (341)
T KOG1163|consen    8 LEELIVG-GKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLES   49 (341)
T ss_pred             hhhheec-cceEEEEeecCCchhheeeeeeccCCceEEEEeec
Confidence            3444443 335556789999999999997 4789999999864

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=91.99  E-value=0.2  Score=39.79  Aligned_cols=48  Identities=10%  Similarity=0.075  Sum_probs=32.2

Q ss_pred             ccccceeecCCCcceEEEEeC-C-CCEEEEEEecCCCCCChHHHHHHHhh
Q 043043          106 FDRKLVMGKGAFGNVYRGTLR-N-SMKVAVKRGETGSGQGLPEFQTAIIV  153 (154)
Q Consensus       106 f~~~~~iG~g~~g~vy~g~l~-~-g~~vaVK~l~~~~~~~~~~f~~e~~~  153 (154)
                      |...+.||+|++|.||++.-. + +..|++|.+..........+..|+.+
T Consensus        69 y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~  118 (478)
T PTZ00267         69 YVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHC  118 (478)
T ss_pred             EEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHH
Confidence            444578999999999998753 3 56788887643333223456667754

>TIGR01477 RIFIN variant surface antigen, rifin family

Probab=91.96  E-value=0.1  Score=39.59  Aligned_cols=25  Identities=24%  Similarity=0.446  Sum_probs=10.5

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHhcCC
Q 043043           28 VLACSVLICILEIVLSFVLIWRKQK   52 (154)
Q Consensus        28 ~v~~~vll~i~~~~~~~~~~~r~~~   52 (154)
                      ++++++++++++++.+..|+||+++
T Consensus       316 iIAIvvIVLIMvIIYLILRYRRKKK  340 (353)
T TIGR01477       316 IIAILIIVLIMVIIYLILRYRRKKK  340 (353)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhcch
Confidence            3333444444444444444444433

This model represents the rifin branch of the rifin/stevor family (pfam02009) of predicted variant surface antigens as found in Plasmodium falciparum. This model is based on a set of rifin sequences kindly provided by Matt Berriman from the Sanger Center. This is a global model and assesses a penalty for incomplete sequence. Additional fragmentary sequences may be found with the fragment model and a cutoff of 20 bits.

>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]

Probab=91.95  E-value=0.13  Score=39.08  Aligned_cols=48  Identities=21%  Similarity=0.225  Sum_probs=32.0

Q ss_pred             ccccceeecCCCcceEEEEe-CCCCEEEEEEecC--CCCCChHHHHHHHhh
Q 043043          106 FDRKLVMGKGAFGNVYRGTL-RNSMKVAVKRGET--GSGQGLPEFQTAIIV  153 (154)
Q Consensus       106 f~~~~~iG~g~~g~vy~g~l-~~g~~vaVK~l~~--~~~~~~~~f~~e~~~  153 (154)
                      +.....||+|.||.|..+.- ++|..||+|++..  ......+.-.+|+.+
T Consensus        24 y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElkl   74 (359)
T KOG0660|consen   24 YVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKL   74 (359)
T ss_pred             ecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHH
Confidence            33346699999999999876 4679999999952  122222344555544

>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=91.94  E-value=0.05  Score=42.91  Aligned_cols=28  Identities=32%  Similarity=0.535  Sum_probs=24.0

Q ss_pred             ceeecCCCcceEEEEe-CCCCEEEEEEec
Q 043043          110 LVMGKGAFGNVYRGTL-RNSMKVAVKRGE  137 (154)
Q Consensus       110 ~~iG~g~~g~vy~g~l-~~g~~vaVK~l~  137 (154)
                      ..||.|.||.||+++- ..|..||||++.
T Consensus        16 ~klGDGTfGsV~la~~~~~~~~VAIK~MK   44 (538)
T KOG0661|consen   16 RKLGDGTFGSVYLAKSKETGELVAIKKMK   44 (538)
T ss_pred             HHhcCCcceeEEEeeecCCCceeeHHHHH
Confidence            5699999999999986 457789999984

>PF01034 Syndecan: Syndecan domain; InterPro: IPR001050 The syndecans are transmembrane proteoglycans which are involved in the organisation of cytoskeleton and/or actin microfilaments, and have important roles as cell surface receptors during cell-cell and/or cell-matrix interactions [, ]

Probab=91.52  E-value=0.04  Score=31.13  Aligned_cols=20  Identities=15%  Similarity=0.215  Sum_probs=0.0

Q ss_pred             cceeEEEehhHHHHHHHHHH
Q 043043           19 KHFMAVVGSVLACSVLICIL   38 (154)
Q Consensus        19 ~~~~~ii~~~v~~~vll~i~   38 (154)
                      ....+|++++++.+++++++
T Consensus        10 vlaavIaG~Vvgll~ailLI   29 (64)
T PF01034_consen   10 VLAAVIAGGVVGLLFAILLI   29 (64)
T ss_dssp             --------------------
T ss_pred             HHHHHHHHHHHHHHHHHHHH
Confidence            34567777777766655544

Structurally, these proteins consist of four separate domains: A signal sequence; An extracellular domain (ectodomain) of variable length whose sequence is not evolutionary conserved in the various forms of syndecans. The ectodomain contains the sites of attachment of the heparan sulphate glycosaminoglycan side chains; A transmembrane region; A highly conserved cytoplasmic domain of about 30 to 35 residues, which could interact with cytoskeletal proteins. The proteins known to belong to this family are: Syndecan 1. Syndecan 2 or fibroglycan. Syndecan 3 or neuroglycan or N-syndecan. Syndecan 4 or amphiglycan or ryudocan. Drosophila syndecan. Caenorhabditis elegans probable syndecan (F57C7.3). Syndecan-4, a transmembrane heparan sulphate proteoglycan, is a coreceptor with integrins in cell adhesion. It has been suggested to form a ternary signalling complex with protein kinase Calpha and phosphatidylinositol 4,5-bisphosphate (PIP2). Structural studies have demonstrated that the cytoplasmic domain undergoes a conformational transition and forms a symmetric dimer in the presence of phospholipid activator PIP2, and whose overall structure in solution exhibits a twisted clamp shape having a cavity in the centre of dimeric interface. In addition, it has been observed that the syndecan-4 variable domain interacts, strongly, not only with fatty acyl groups but also the anionic head group of PIP2. These findings indicate that PIP2 promotes oligomerisation of the syndecan-4 cytoplasmic domain for transmembrane signalling and cell-matrix adhesion [, ].; GO: 0008092 cytoskeletal protein binding, 0016020 membrane; PDB: 1EJQ_B 1EJP_B 1YBO_C 1OBY_Q.

>TIGR01478 STEVOR variant surface antigen, stevor family

Probab=91.48  E-value=0.25  Score=36.38  Aligned_cols=10  Identities=30%  Similarity=0.424  Sum_probs=3.9

Q ss_pred             HHHHHHHHhc
Q 043043           41 VLSFVLIWRK   50 (154)
Q Consensus        41 ~~~~~~~~r~   50 (154)
                      +++.|.+|||
T Consensus       277 iLYiWlyrrR  286 (295)
T TIGR01478       277 ILYIWLYRRR  286 (295)
T ss_pred             HHHHHHHHhh
Confidence            3333444443

This model represents the stevor branch of the rifin/stevor family (pfam02009) of predicted variant surface antigens as found in Plasmodium falciparum. This model is based on a set of stevor sequences kindly provided by Matt Berriman from the Sanger Center. This is a global model and assesses a penalty for incomplete sequence. Additional fragmentary sequences may be found with the fragment model and a cutoff of 8 bits.

>PHA03207 serine/threonine kinase US3; Provisional

Probab=91.42  E-value=0.28  Score=37.82  Aligned_cols=34  Identities=24%  Similarity=0.244  Sum_probs=26.5

Q ss_pred             CccccceeecCCCcceEEEEeC---CCCEEEEEEecC
Q 043043          105 NFDRKLVMGKGAFGNVYRGTLR---NSMKVAVKRGET  138 (154)
Q Consensus       105 ~f~~~~~iG~g~~g~vy~g~l~---~g~~vaVK~l~~  138 (154)
                      .|.....||+|+||.||++...   .+..|++|.+..
T Consensus        93 ~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~  129 (392)
T PHA03207         93 QYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTG  129 (392)
T ss_pred             ceEEEEeecCCCCeEEEEEEEcCCccceeEEEEeccc
Confidence            4666678999999999998763   346799998853

>PF15069 FAM163: FAM163 family

Probab=91.36  E-value=0.6  Score=30.83  Aligned_cols=25  Identities=24%  Similarity=0.594  Sum_probs=14.4

Q ss_pred             eeEEEehhHHHHHHHHHHHHHHHHH
Q 043043           21 FMAVVGSVLACSVLICILEIVLSFV   45 (154)
Q Consensus        21 ~~~ii~~~v~~~vll~i~~~~~~~~   45 (154)
                      ..+|.|.+++.++||+|++++.+++
T Consensus         5 TvVItGgILAtVILLcIIaVLCYCR   29 (143)
T PF15069_consen    5 TVVITGGILATVILLCIIAVLCYCR   29 (143)
T ss_pred             eEEEechHHHHHHHHHHHHHHHHHh
Confidence            3456666666666666665555443

>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=91.23  E-value=0.37  Score=37.17  Aligned_cols=34  Identities=26%  Similarity=0.394  Sum_probs=26.9

Q ss_pred             CccccceeecCCCcceEEEEe-CCCCEEEEEEecC
Q 043043          105 NFDRKLVMGKGAFGNVYRGTL-RNSMKVAVKRGET  138 (154)
Q Consensus       105 ~f~~~~~iG~g~~g~vy~g~l-~~g~~vaVK~l~~  138 (154)
                      ++.....||+|.||.||.+.- ..+..||+|.++.
T Consensus        18 ~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~   52 (370)
T KOG0583|consen   18 KYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDR   52 (370)
T ss_pred             ceeeeeeecCCCCeeEEEeeeccCCCeEEEEEech
Confidence            445557799999999999965 4679999997653

>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]

Probab=91.21  E-value=0.31  Score=39.15  Aligned_cols=50  Identities=24%  Similarity=0.373  Sum_probs=35.3

Q ss_pred             CccccceeecCCCcceEEEE-eCCCCEEEEEEecCCCCCChHHHHHHHhhC
Q 043043          105 NFDRKLVMGKGAFGNVYRGT-LRNSMKVAVKRGETGSGQGLPEFQTAIIVL  154 (154)
Q Consensus       105 ~f~~~~~iG~g~~g~vy~g~-l~~g~~vaVK~l~~~~~~~~~~f~~e~~~l  154 (154)
                      .|.....||+|..|.||.+. ...+..||||+++...-....-..+|+.+|
T Consensus       274 ~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm  324 (550)
T KOG0578|consen  274 KYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVM  324 (550)
T ss_pred             hhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHH
Confidence            34455679999999999875 456788999999754333334456777654

>PTZ00370 STEVOR; Provisional

Probab=91.13  E-value=0.28  Score=36.23  Aligned_cols=9  Identities=33%  Similarity=0.357  Sum_probs=3.6

Q ss_pred             HHHHHHHhc
Q 043043           42 LSFVLIWRK   50 (154)
Q Consensus        42 ~~~~~~~r~   50 (154)
                      ++.|.+|||
T Consensus       274 lYiwlyrrR  282 (296)
T PTZ00370        274 LYIWLYRRR  282 (296)
T ss_pred             HHHHHHHhh
Confidence            333444443

>PF04689 S1FA: DNA binding protein S1FA; InterPro: IPR006779 S1FA is an unusual small plant peptide of only 70 amino acids with a basic domain which contains a nuclear localization signal and a putative DNA binding helix

Probab=91.07  E-value=0.73  Score=25.96  Aligned_cols=33  Identities=18%  Similarity=0.119  Sum_probs=22.9

Q ss_pred             CCcceeEEEehhHHHHHHHHHHHHHHHHHHHHh
Q 043043           17 KKKHFMAVVGSVLACSVLICILEIVLSFVLIWR   49 (154)
Q Consensus        17 ~~~~~~~ii~~~v~~~vll~i~~~~~~~~~~~r   49 (154)
                      +...-++|+.++++.+++++++.-++++.+.++
T Consensus         8 KGlnPGlIVLlvV~g~ll~flvGnyvlY~Yaqk   40 (69)
T PF04689_consen    8 KGLNPGLIVLLVVAGLLLVFLVGNYVLYVYAQK   40 (69)
T ss_pred             cCCCCCeEEeehHHHHHHHHHHHHHHHHHHHhh
Confidence            445566788888888888888876666655443

S1FA is highly conserved between dicotyledonous and monocotyledonous plants and may be a DNA-binding protein that specifically recognises the negative promoter element S1F [].; GO: 0003677 DNA binding, 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus

>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional

Probab=91.04  E-value=0.43  Score=34.45  Aligned_cols=36  Identities=14%  Similarity=-0.147  Sum_probs=28.9

Q ss_pred             hcCccccceeecCCCcceEEEEeCCCCEEEEEEecCC
Q 043043          103 THNFDRKLVMGKGAFGNVYRGTLRNSMKVAVKRGETG  139 (154)
Q Consensus       103 t~~f~~~~~iG~g~~g~vy~g~l~~g~~vaVK~l~~~  139 (154)
                      .+++...+++|.|+||.||...- ++..+++|.+...
T Consensus        30 ~~~y~~~~~l~~~~f~~v~l~~~-~~~~~iiKvf~~~   65 (232)
T PRK10359         30 SYNIKTIKVFRNIDDTKVSLIDT-DYGKYILKVFAPK   65 (232)
T ss_pred             hCceEEEEEecCCCceEEEEEec-CCCcEEEEEechh
Confidence            35677788999999999998655 5668999999543

>PF01299 Lamp: Lysosome-associated membrane glycoprotein (Lamp); InterPro: IPR002000 Lysosome-associated membrane glycoproteins (lamp) [] are integral membrane proteins, specific to lysosomes, and whose exact biological function is not yet clear

Probab=91.02  E-value=0.17  Score=38.04  Aligned_cols=29  Identities=10%  Similarity=0.265  Sum_probs=14.7

Q ss_pred             eEEEehhHHHHHHHHHHHHHHHHHHHHhc
Q 043043           22 MAVVGSVLACSVLICILEIVLSFVLIWRK   50 (154)
Q Consensus        22 ~~ii~~~v~~~vll~i~~~~~~~~~~~r~   50 (154)
                      ..++.++||++++.+++++++.|+..|||
T Consensus       270 ~~~vPIaVG~~La~lvlivLiaYli~Rrr  298 (306)
T PF01299_consen  270 SDLVPIAVGAALAGLVLIVLIAYLIGRRR  298 (306)
T ss_pred             cchHHHHHHHHHHHHHHHHHHhheeEecc
Confidence            45666666666654444444344333333

Structurally, the lamp proteins consist of two internally homologous lysosome-luminal domains separated by a proline-rich hinge region; at the C-terminal extremity there is a transmembrane region (TM) followed by a very short cytoplasmic tail (C). In each of the duplicated domains, there are two conserved disulphide bonds. This structure is schematically represented in the figure below. +-----+ +-----+ +-----+ +-----+ | | | | | | | | xCxxxxxCxxxxxxxxxxxxCxxxxxCxxxxxxxxxCxxxxxCxxxxxxxxxxxxCxxxxxCxxxxxxxx +--------------------------++Hinge++--------------------------++TM++C+ In mammals, there are two closely related types of lamp: lamp-1 and lamp-2, which form major components of the lysosome membrane. In chicken lamp-1 is known as LEP100. Also included in this entry is the macrophage protein CD68 (or macrosialin) [] is a heavily glycosylated integral membrane protein whose structure consists of a mucin-like domain followed by a proline-rich hinge; a single lamp-like domain; a transmembrane region and a short cytoplasmic tail. Similar to CD68, mammalian lamp-3, which is expressed in lymphoid organs, dendritic cells and in lung, contains all the C-terminal regions but lacks the N-terminal lamp-like region []. In a lamp-family protein from nematodes [] only the part C-terminal to the hinge is conserved. ; GO: 0016020 membrane

>PF03229 Alpha_GJ: Alphavirus glycoprotein J; InterPro: IPR004913 The exact function of the herpesvirus glycoprotein J is unknown, but it appears to play a role in the inhibition of apotosis of the host cell []

Probab=90.93  E-value=0.51  Score=29.94  Aligned_cols=19  Identities=5%  Similarity=0.010  Sum_probs=10.7

Q ss_pred             EEEehhHHHHHHHHHHHHH
Q 043043           23 AVVGSVLACSVLICILEIV   41 (154)
Q Consensus        23 ~ii~~~v~~~vll~i~~~~   41 (154)
                      .++.+++|++..+.+.++.
T Consensus        84 ~aLp~VIGGLcaL~LaamG  102 (126)
T PF03229_consen   84 FALPLVIGGLCALTLAAMG  102 (126)
T ss_pred             cchhhhhhHHHHHHHHHHH
Confidence            4556677766655544433

; GO: 0019050 suppression by virus of host apoptosis

>PF04478 Mid2: Mid2 like cell wall stress sensor; InterPro: IPR007567 This family represents a region near the C terminus of Mid2, which contains a transmembrane region

Probab=90.90  E-value=0.093  Score=35.03  Aligned_cols=26  Identities=15%  Similarity=-0.043  Sum_probs=16.5

Q ss_pred             CCCCCcceeEEEehhHHHHHHHHHHHH
Q 043043           14 NGPKKKHFMAVVGSVLACSVLICILEI   40 (154)
Q Consensus        14 ~~~~~~~~~~ii~~~v~~~vll~i~~~   40 (154)
                      .+.++...++++|+.++++++ +++++
T Consensus        45 ~knknIVIGvVVGVGg~ill~-il~lv   70 (154)
T PF04478_consen   45 SKNKNIVIGVVVGVGGPILLG-ILALV   70 (154)
T ss_pred             cCCccEEEEEEecccHHHHHH-HHHhh
Confidence            345567888888877765554 44444

The remainder of the protein sequence is serine-rich and of low complexity, and is therefore impossible to align accurately. Mid2 is thought to act as a mechanosensor of cell wall stress. The C-terminal cytoplasmic region of Mid2 is known to interact with Rom2, a guanine nucleotide exchange factor (GEF) for Rho1, which is part of the cell wall integrity signalling pathway [].

>PHA03265 envelope glycoprotein D; Provisional

Probab=90.85  E-value=0.46  Score=36.08  Aligned_cols=29  Identities=21%  Similarity=0.153  Sum_probs=17.5

Q ss_pred             CCCcccCCCCCcceeEEEehhHHHHHHHH
Q 043043            8 GSVPVVNGPKKKHFMAVVGSVLACSVLIC   36 (154)
Q Consensus         8 ~~~~~~~~~~~~~~~~ii~~~v~~~vll~   36 (154)
                      +-.+.++.+.+..++++||..+++++++.
T Consensus       337 ~~~~~~s~~~~~~~g~~ig~~i~glv~vg  365 (402)
T PHA03265        337 TKPPPTSKSNSTFVGISVGLGIAGLVLVG  365 (402)
T ss_pred             cCCCCCCCCCCcccceEEccchhhhhhhh
Confidence            33445556666777788877665554443

>PHA03209 serine/threonine kinase US3; Provisional

Probab=90.76  E-value=0.4  Score=36.40  Aligned_cols=35  Identities=20%  Similarity=0.279  Sum_probs=28.2

Q ss_pred             hcCccccceeecCCCcceEEEEeC-CCCEEEEEEec
Q 043043          103 THNFDRKLVMGKGAFGNVYRGTLR-NSMKVAVKRGE  137 (154)
Q Consensus       103 t~~f~~~~~iG~g~~g~vy~g~l~-~g~~vaVK~l~  137 (154)
                      ..+|.....||+|.||.||++... .+..||+|...
T Consensus        65 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~  100 (357)
T PHA03209         65 SLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQ  100 (357)
T ss_pred             hcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCC
Confidence            346777789999999999999985 35688998753

>PF15050 SCIMP: SCIMP protein

Probab=90.72  E-value=0.3  Score=31.16  Aligned_cols=21  Identities=19%  Similarity=0.430  Sum_probs=10.3

Q ss_pred             HHHHHHHHHHHHHHHHHHhcC
Q 043043           31 CSVLICILEIVLSFVLIWRKQ   51 (154)
Q Consensus        31 ~~vll~i~~~~~~~~~~~r~~   51 (154)
                      ++++-+.++++++|.||+..+
T Consensus        16 II~vS~~lglIlyCvcR~~lR   36 (133)
T PF15050_consen   16 IILVSVVLGLILYCVCRWQLR   36 (133)
T ss_pred             HHHHHHHHHHHHHHHHHHHHH
Confidence            333344555566655554433

>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=90.53  E-value=0.042  Score=45.20  Aligned_cols=43  Identities=35%  Similarity=0.584  Sum_probs=33.5

Q ss_pred             eecCCCcceEEEEeCCC-CEEEEEEecCCCCCChHHHHHHHhhC
Q 043043          112 MGKGAFGNVYRGTLRNS-MKVAVKRGETGSGQGLPEFQTAIIVL  154 (154)
Q Consensus       112 iG~g~~g~vy~g~l~~g-~~vaVK~l~~~~~~~~~~f~~e~~~l  154 (154)
                      ||.|.||.||+++-.+. ...|-|.++..+.....+|.-|+++|
T Consensus        40 LGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeIL   83 (1187)
T KOG0579|consen   40 LGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEIL   83 (1187)
T ss_pred             hcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhh
Confidence            89999999999987653 34567888766666667899888875

>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=90.37  E-value=0.26  Score=42.52  Aligned_cols=32  Identities=34%  Similarity=0.502  Sum_probs=27.2

Q ss_pred             ccccceeecCCCcceEEEEeCCCCEEEEEEec
Q 043043          106 FDRKLVMGKGAFGNVYRGTLRNSMKVAVKRGE  137 (154)
Q Consensus       106 f~~~~~iG~g~~g~vy~g~l~~g~~vaVK~l~  137 (154)
                      |.-...||+|+||.||+|.-.+|..||+|.=.
T Consensus       700 ~~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~  731 (974)
T KOG1166|consen  700 FCISKEIGEGSYGSVYVATHSNGKLVALKVEK  731 (974)
T ss_pred             EEEEeeeccccceEEEEeecCCCcEEEEEeec
Confidence            44455799999999999999899999999763

>PF15176 LRR19-TM: Leucine-rich repeat family 19 TM domain

Probab=90.28  E-value=0.44  Score=29.49  Aligned_cols=24  Identities=17%  Similarity=0.315  Sum_probs=13.0

Q ss_pred             CcceeEEEehhHHHHHHHHHHHHH
Q 043043           18 KKHFMAVVGSVLACSVLICILEIV   41 (154)
Q Consensus        18 ~~~~~~ii~~~v~~~vll~i~~~~   41 (154)
                      .+.+..++|++++++++-++|++.
T Consensus        14 g~sW~~LVGVv~~al~~SlLIala   37 (102)
T PF15176_consen   14 GRSWPFLVGVVVTALVTSLLIALA   37 (102)
T ss_pred             CcccHhHHHHHHHHHHHHHHHHHH
Confidence            455556666666655544444433

>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]

Probab=90.24  E-value=0.46  Score=38.56  Aligned_cols=53  Identities=15%  Similarity=0.165  Sum_probs=39.0

Q ss_pred             hhcCccccceeecCCCcceEEEEeC-CCCEEEEEEecCC--CCCChHHHHHHHhhC
Q 043043          102 ATHNFDRKLVMGKGAFGNVYRGTLR-NSMKVAVKRGETG--SGQGLPEFQTAIIVL  154 (154)
Q Consensus       102 at~~f~~~~~iG~g~~g~vy~g~l~-~g~~vaVK~l~~~--~~~~~~~f~~e~~~l  154 (154)
                      ...++.....||+|.|+.|..+.-. .++.||+|.++..  +......+.+|+++|
T Consensus        54 ~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~im  109 (596)
T KOG0586|consen   54 SVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIM  109 (596)
T ss_pred             cccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHH
Confidence            3455666778999999999998763 5789999998533  333345688888764

>PF12191 stn_TNFRSF12A: Tumour necrosis factor receptor stn_TNFRSF12A_TNFR domain; InterPro: IPR022316 The tumour necrosis factor (TNF) receptor (TNFR) superfamily comprises more than 20 type-I transmembrane proteins

Probab=90.13  E-value=0.11  Score=33.38  Aligned_cols=32  Identities=13%  Similarity=-0.096  Sum_probs=0.0

Q ss_pred             EEEehhHHHHHHHHHHHHHHHHHHHHhcCCCC
Q 043043           23 AVVGSVLACSVLICILEIVLSFVLIWRKQKPD   54 (154)
Q Consensus        23 ~ii~~~v~~~vll~i~~~~~~~~~~~r~~~~~   54 (154)
                      ..|+..+.++++++.++..+++++|+||+++-
T Consensus        79 ~pi~~sal~v~lVl~llsg~lv~rrcrrr~~~  110 (129)
T PF12191_consen   79 WPILGSALSVVLVLALLSGFLVWRRCRRREKF  110 (129)
T ss_dssp             --------------------------------
T ss_pred             hhhhhhHHHHHHHHHHHHHHHHHhhhhccccC
Confidence            33333333333333333334444444444443

Family members are defined based on similarity in their extracellular domain - a region that contains many cysteine residues arranged in a specific repetitive pattern []. The cysteines allow formation of an extended rod-like structure, responsible for ligand binding []. Upon receptor activation, different intracellular signalling complexes are assembled for different members of the TNFR superfamily, depending on their intracellular domains and sequences []. Activation of TNFRs can therefore induce a range of disparate effects, including cell proliferation, differentiation, survival, or apoptotic cell death, depending upon the receptor involved []. TNFRs are widely distributed and play important roles in many crucial biological processes, such as lymphoid and neuronal development, innate and adaptive immunity, and maintenance of cellular homeostasis []. Drugs that manipulate their signalling have potential roles in the prevention and treatment of many diseases, such as viral infections, coronary heart disease, transplant rejection, and immune disease []. TNF receptor 12 (also known as TWEAK receptor, and fibroblast growth factor-inducible-14 (Fn14)) has been implicated in endothelial cell growth and migration []. The receptor may also play a role in cell-matrix interactions [].; PDB: 2KN0_A 2RPJ_A 2KMZ_A 2EQP_A.

>PF07204 Orthoreo_P10: Orthoreovirus membrane fusion protein p10; InterPro: IPR009854 This family consists of several Orthoreovirus membrane fusion protein p10 sequences

Probab=90.05  E-value=0.23  Score=30.28  Aligned_cols=19  Identities=26%  Similarity=0.254  Sum_probs=7.5

Q ss_pred             HHHHHHHHHHHHHHHHHHhc
Q 043043           31 CSVLICILEIVLSFVLIWRK   50 (154)
Q Consensus        31 ~~vll~i~~~~~~~~~~~r~   50 (154)
                      ++++++|+ +.+++|++.|.
T Consensus        50 G~iLilIi-i~Lv~CC~~K~   68 (98)
T PF07204_consen   50 GLILILII-IALVCCCRAKH   68 (98)
T ss_pred             hhhhHHHH-HHHHHHhhhhh
Confidence            33333333 44444444333

p10 is thought to be a multifunctional protein that plays a key role in virus-host interaction [].

>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]

Probab=89.97  E-value=0.11  Score=43.64  Aligned_cols=31  Identities=42%  Similarity=0.641  Sum_probs=25.7

Q ss_pred             ccccceeecCCCcc-eEEEEeCCCCEEEEEEec
Q 043043          106 FDRKLVMGKGAFGN-VYRGTLRNSMKVAVKRGE  137 (154)
Q Consensus       106 f~~~~~iG~g~~g~-vy~g~l~~g~~vaVK~l~  137 (154)
                      |..+.++|.|+.|+ ||+|.+ +|+.||||++-
T Consensus       511 ~~~~eilG~Gs~Gt~Vf~G~y-e~R~VAVKrll  542 (903)
T KOG1027|consen  511 FSPKEILGYGSNGTVVFRGVY-EGREVAVKRLL  542 (903)
T ss_pred             eccHHHcccCCCCcEEEEEee-CCceehHHHHh
Confidence            56778899999865 589999 46899999993

>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]

Probab=89.47  E-value=0.46  Score=40.36  Aligned_cols=46  Identities=24%  Similarity=0.445  Sum_probs=36.6

Q ss_pred             ccHHHHHHhhcCccccceeecCCCcceEEEE-eCCCCEEEEEEecCC
Q 043043           94 IPYVEIKFATHNFDRKLVMGKGAFGNVYRGT-LRNSMKVAVKRGETG  139 (154)
Q Consensus        94 ~~~~~l~~at~~f~~~~~iG~g~~g~vy~g~-l~~g~~vaVK~l~~~  139 (154)
                      ..++.+...+..|....+||.|.+|-||++. ..+++.+|+|+++..
T Consensus         9 ~~~~~lpdp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~   55 (953)
T KOG0587|consen    9 IDLSSLPDPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPT   55 (953)
T ss_pred             cchhhCCCCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCC
Confidence            3455566667778778899999999999986 467899999999654

>PTZ00208 65 kDa invariant surface glycoprotein; Provisional

Probab=89.24  E-value=0.03  Score=42.95  Aligned_cols=34  Identities=15%  Similarity=0.208  Sum_probs=20.1

Q ss_pred             CCCcceeEEEehhHHHHHHHHHHHHHHHHHHHHh
Q 043043           16 PKKKHFMAVVGSVLACSVLICILEIVLSFVLIWR   49 (154)
Q Consensus        16 ~~~~~~~~ii~~~v~~~vll~i~~~~~~~~~~~r   49 (154)
                      +.+....+|+++++.+++++++.+.++++.+|||
T Consensus       381 ~~~~~~~i~~avl~p~~il~~~~~~~~~~v~rrr  414 (436)
T PTZ00208        381 RHQRTAMIILAVLVPAIILAIIAVAFFIMVKRRR  414 (436)
T ss_pred             hhhhhHHHHHHHHHHHHHHHHHHHHhheeeeecc
Confidence            3444556677777877777755554544444443

>COG0661 AarF Predicted unusual protein kinase [General function prediction only]

Probab=89.11  E-value=0.34  Score=39.09  Aligned_cols=30  Identities=27%  Similarity=0.361  Sum_probs=26.9

Q ss_pred             ceeecCCCcceEEEEeCCCCEEEEEEecCC
Q 043043          110 LVMGKGAFGNVYRGTLRNSMKVAVKRGETG  139 (154)
Q Consensus       110 ~~iG~g~~g~vy~g~l~~g~~vaVK~l~~~  139 (154)
                      +-|+..+.|.||+|++++|..||||.+.+.
T Consensus       131 ~PiAsASIaQVH~A~L~sG~~VAVKVqrPg  160 (517)
T COG0661         131 EPIASASIAQVHRAVLKSGEEVAVKVQRPG  160 (517)
T ss_pred             CchhhhhHhhheeEEecCCCEEEEEecCCC
Confidence            458999999999999999999999999654

>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]

Probab=88.84  E-value=0.13  Score=40.16  Aligned_cols=45  Identities=24%  Similarity=0.372  Sum_probs=32.4

Q ss_pred             ceeecCCCcceEEEEe-CCCCEEEEEEecCCC---CCChHHHHHHHhhC
Q 043043          110 LVMGKGAFGNVYRGTL-RNSMKVAVKRGETGS---GQGLPEFQTAIIVL  154 (154)
Q Consensus       110 ~~iG~g~~g~vy~g~l-~~g~~vaVK~l~~~~---~~~~~~f~~e~~~l  154 (154)
                      ..||+|.||.|-++.= ..|..||||.+....   .++.-...+|+++|
T Consensus        59 etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIM  107 (668)
T KOG0611|consen   59 ETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIM  107 (668)
T ss_pred             HHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHH
Confidence            4599999999998865 568999999995332   22223456788775

>PF10873 DUF2668: Protein of unknown function (DUF2668); InterPro: IPR022640 Members in this family of proteins are annotated as cysteine and tyrosine-rich protein 1, however currently no function is known []

Probab=88.79  E-value=0.86  Score=30.14  Aligned_cols=30  Identities=17%  Similarity=0.184  Sum_probs=18.7

Q ss_pred             eeEEEehhHHHHHHHHHHHHHHHHHHHHhc
Q 043043           21 FMAVVGSVLACSVLICILEIVLSFVLIWRK   50 (154)
Q Consensus        21 ~~~ii~~~v~~~vll~i~~~~~~~~~~~r~   50 (154)
                      -..|.|+++|+++++.+++.++++++...+
T Consensus        60 gtAIaGIVfgiVfimgvva~i~icvCmc~k   89 (155)
T PF10873_consen   60 GTAIAGIVFGIVFIMGVVAGIAICVCMCMK   89 (155)
T ss_pred             cceeeeeehhhHHHHHHHHHHHHHHhhhhh
Confidence            446777777777777766655555444433

>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=88.37  E-value=0.68  Score=38.95  Aligned_cols=41  Identities=24%  Similarity=0.524  Sum_probs=27.1

Q ss_pred             eeecCCCcceEEEEeCCC-CEEEEEEecCCCCCChHHHHHHH
Q 043043          111 VMGKGAFGNVYRGTLRNS-MKVAVKRGETGSGQGLPEFQTAI  151 (154)
Q Consensus       111 ~iG~g~~g~vy~g~l~~g-~~vaVK~l~~~~~~~~~~f~~e~  151 (154)
                      +||+|.||+||-|+=.+. ..+|||-+.........-...|+
T Consensus       582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEI  623 (1226)
T KOG4279|consen  582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEI  623 (1226)
T ss_pred             EeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHH
Confidence            799999999999985443 46799988533222222344444

>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]

Probab=88.26  E-value=0.36  Score=35.31  Aligned_cols=48  Identities=21%  Similarity=0.190  Sum_probs=34.6

Q ss_pred             CccccceeecCCCcceEEEE-eCCCCEEEEEEecCCCCCChHHHHHHHh
Q 043043          105 NFDRKLVMGKGAFGNVYRGT-LRNSMKVAVKRGETGSGQGLPEFQTAII  152 (154)
Q Consensus       105 ~f~~~~~iG~g~~g~vy~g~-l~~g~~vaVK~l~~~~~~~~~~f~~e~~  152 (154)
                      +|.-...||+|+|..||.+. +.++...|.|++-..+..+.+.-.+|++
T Consensus        22 Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid   70 (302)
T KOG2345|consen   22 RYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREID   70 (302)
T ss_pred             eEEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHH
Confidence            34445779999999999886 5677889999996554444455566664

>PF07213 DAP10: DAP10 membrane protein; InterPro: IPR009861 This family consists of several mammalian DAP10 membrane proteins

Probab=87.92  E-value=0.3  Score=28.87  Aligned_cols=33  Identities=21%  Similarity=0.172  Sum_probs=20.0

Q ss_pred             CcceeEEEehhHHHHHHHHHHHHHHHHHHHHhc
Q 043043           18 KKHFMAVVGSVLACSVLICILEIVLSFVLIWRK   50 (154)
Q Consensus        18 ~~~~~~ii~~~v~~~vll~i~~~~~~~~~~~r~   50 (154)
                      +...++++|++++=+++-++++...++|-|.|+
T Consensus        30 ~ls~g~LaGiV~~D~vlTLLIv~~vy~car~r~   62 (79)
T PF07213_consen   30 PLSPGLLAGIVAADAVLTLLIVLVVYYCARPRR   62 (79)
T ss_pred             ccCHHHHHHHHHHHHHHHHHHHHHHHhhccccc
Confidence            445566777777766666666666655544333

In activated mouse natural killer (NK) cells, the NKG2D receptor associates with two intracellular adaptors, DAP10 and DAP12, which trigger phosphatidyl inositol 3 kinase (PI3K) and Syk family protein tyrosine kinases, respectively. It has been suggested that the DAP10-PI3K pathway is sufficient to initiate NKG2D-mediated killing of target cells [].

>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=87.79  E-value=0.18  Score=40.71  Aligned_cols=45  Identities=20%  Similarity=0.282  Sum_probs=35.7

Q ss_pred             ceeecCCCcceEEEEeCCCCEEEEEEecC--CCCCChHHHHHHHhhC
Q 043043          110 LVMGKGAFGNVYRGTLRNSMKVAVKRGET--GSGQGLPEFQTAIIVL  154 (154)
Q Consensus       110 ~~iG~g~~g~vy~g~l~~g~~vaVK~l~~--~~~~~~~~f~~e~~~l  154 (154)
                      ..||+|+...||+....+.+.+|.|+...  ...+....|.+|+++|
T Consensus       367 k~iG~GGSSkV~kV~~s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL  413 (677)
T KOG0596|consen  367 KQIGSGGSSKVFKVLNSDKQIYALKKVVLLEADNQTLDGYRNEIALL  413 (677)
T ss_pred             HhhcCCCcceeeeeecCCCcchhhhHHHHhhcCHHHHHHHHHHHHHH
Confidence            46999999999999998888899888743  3444557799998764

>PF05568 ASFV_J13L: African swine fever virus J13L protein; InterPro: IPR008385 This family consists of several African swine fever virus (ASFV) j13L proteins [, , ]

Probab=87.72  E-value=0.6  Score=30.94  Aligned_cols=24  Identities=25%  Similarity=0.358  Sum_probs=10.1

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHhc
Q 043043           27 SVLACSVLICILEIVLSFVLIWRK   50 (154)
Q Consensus        27 ~~v~~~vll~i~~~~~~~~~~~r~   50 (154)
                      ++++++++++++++.+++|-+|+|
T Consensus        34 ILiaIvVliiiiivli~lcssRKk   57 (189)
T PF05568_consen   34 ILIAIVVLIIIIIVLIYLCSSRKK   57 (189)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhhH
Confidence            344444444444333344434433

>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]

Probab=87.66  E-value=0.53  Score=33.72  Aligned_cols=44  Identities=23%  Similarity=0.286  Sum_probs=31.3

Q ss_pred             ceeecCCCcceEEEEe-CCCCEEEEEEecCC-CCCChHHHHHHHhh
Q 043043          110 LVMGKGAFGNVYRGTL-RNSMKVAVKRGETG-SGQGLPEFQTAIIV  153 (154)
Q Consensus       110 ~~iG~g~~g~vy~g~l-~~g~~vaVK~l~~~-~~~~~~~f~~e~~~  153 (154)
                      .-||+|++|.|-+-+. .+|+..|||++... +.+.+...+.|+.+
T Consensus        52 ~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi   97 (282)
T KOG0984|consen   52 EELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDI   97 (282)
T ss_pred             hhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhh
Confidence            3499999999877554 68999999999532 34444556666643

>PHA03265 envelope glycoprotein D; Provisional

Probab=87.64  E-value=0.36  Score=36.60  Aligned_cols=36  Identities=22%  Similarity=0.282  Sum_probs=20.6

Q ss_pred             CCCCcceeEEEehhHHHHHHHHHH-HHHHHHHHHHhc
Q 043043           15 GPKKKHFMAVVGSVLACSVLICIL-EIVLSFVLIWRK   50 (154)
Q Consensus        15 ~~~~~~~~~ii~~~v~~~vll~i~-~~~~~~~~~~r~   50 (154)
                      ...+...+-.+|+++|..++-+++ ..++++|.|||+
T Consensus       340 ~~~s~~~~~~~g~~ig~~i~glv~vg~il~~~~rr~k  376 (402)
T PHA03265        340 PPTSKSNSTFVGISVGLGIAGLVLVGVILYVCLRRKK  376 (402)
T ss_pred             CCCCCCCCcccceEEccchhhhhhhhHHHHHHhhhhh
Confidence            344555667788887766655544 455544444443

>PF14610 DUF4448: Protein of unknown function (DUF4448)

Probab=87.15  E-value=0.54  Score=32.73  Aligned_cols=13  Identities=15%  Similarity=0.278  Sum_probs=5.0

Q ss_pred             EEehhHHHHHHHH
Q 043043           24 VVGSVLACSVLIC   36 (154)
Q Consensus        24 ii~~~v~~~vll~   36 (154)
                      .+++++.++++++
T Consensus       159 ~laI~lPvvv~~~  171 (189)
T PF14610_consen  159 ALAIALPVVVVVL  171 (189)
T ss_pred             eEEEEccHHHHHH
Confidence            3333333344333

>PF12768 Rax2: Cortical protein marker for cell polarity

Probab=86.89  E-value=2.7  Score=31.30  Aligned_cols=9  Identities=44%  Similarity=0.072  Sum_probs=3.8

Q ss_pred             CCcceeEEE
Q 043043           17 KKKHFMAVV   25 (154)
Q Consensus        17 ~~~~~~~ii   25 (154)
                      ++..++.++
T Consensus       222 ~~l~~G~VV  230 (281)
T PF12768_consen  222 KKLSRGFVV  230 (281)
T ss_pred             ccccceEEE
Confidence            444444333

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=86.75  E-value=2.5  Score=30.47  Aligned_cols=35  Identities=17%  Similarity=0.077  Sum_probs=25.7

Q ss_pred             cCccccce--eecCCCcceEEEEeC-CCCEEEEEEecC
Q 043043          104 HNFDRKLV--MGKGAFGNVYRGTLR-NSMKVAVKRGET  138 (154)
Q Consensus       104 ~~f~~~~~--iG~g~~g~vy~g~l~-~g~~vaVK~l~~  138 (154)
                      +++...+.  ||+|.||.||++.-. ++..+++|.+..
T Consensus        14 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~   51 (267)
T PHA03390         14 KNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKA   51 (267)
T ss_pred             HhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEeh
Confidence            34444444  599999999998864 567889998853

>PHA03210 serine/threonine kinase US3; Provisional

Probab=86.19  E-value=0.29  Score=39.15  Aligned_cols=23  Identities=30%  Similarity=0.485  Sum_probs=18.8

Q ss_pred             cCccccceeecCCCcceEEEEeC
Q 043043          104 HNFDRKLVMGKGAFGNVYRGTLR  126 (154)
Q Consensus       104 ~~f~~~~~iG~g~~g~vy~g~l~  126 (154)
                      ..|.....||+|+||.||++...
T Consensus       148 ~~Y~ii~~LG~G~fG~Vyl~~~~  170 (501)
T PHA03210        148 AHFRVIDDLPAGAFGKIFICALR  170 (501)
T ss_pred             hccEEEeEecCCCCcceEEEEEe
Confidence            45666778999999999998764

>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]

Probab=86.07  E-value=0.56  Score=36.62  Aligned_cols=29  Identities=31%  Similarity=0.393  Sum_probs=25.0

Q ss_pred             ceeecCCCcceEEEEeCC-CCEEEEEEecC
Q 043043          110 LVMGKGAFGNVYRGTLRN-SMKVAVKRGET  138 (154)
Q Consensus       110 ~~iG~g~~g~vy~g~l~~-g~~vaVK~l~~  138 (154)
                      ..||.|..|+||.+.+.+ ++..|+|.++.
T Consensus        83 k~LG~GdiG~VyL~~l~~t~~~fAmKVmdK  112 (459)
T KOG0610|consen   83 KRLGCGDIGTVYLVELRGTNCLFAMKVMDK  112 (459)
T ss_pred             HHcCCCCceeEEEEEecCCCceEEEEEecH
Confidence            569999999999999975 37899999964

>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]

Probab=85.67  E-value=1.6  Score=30.49  Aligned_cols=41  Identities=24%  Similarity=0.276  Sum_probs=29.3

Q ss_pred             ceeecCCCcceEEEEeCCCCEEEEEEecCCCCCChHHHHHHHhh
Q 043043          110 LVMGKGAFGNVYRGTLRNSMKVAVKRGETGSGQGLPEFQTAIIV  153 (154)
Q Consensus       110 ~~iG~g~~g~vy~g~l~~g~~vaVK~l~~~~~~~~~~f~~e~~~  153 (154)
                      ..|++|.++.||.|.+.+ ..+|+|.-...+  ....+..|+++
T Consensus        28 ~~L~KG~~s~Vyl~~~~~-~~~a~Kvrr~ds--~r~~l~kEaki   68 (201)
T COG2112          28 KELAKGTTSVVYLGEWRG-GEVALKVRRRDS--PRRNLEKEAKI   68 (201)
T ss_pred             hhhhcccccEEEEeeccC-ceEEEEEecCCc--chhhHHHHHHH
Confidence            559999999999999965 478888764332  23456666654

>KOG4258 consensus Insulin/growth factor receptor (contains protein kinase domain) [Signal transduction mechanisms]

Probab=85.58  E-value=0.13  Score=43.27  Aligned_cols=33  Identities=27%  Similarity=0.416  Sum_probs=24.0

Q ss_pred             ccHHHHHHhhcCccccceeecCCCcceEEEEeCC
Q 043043           94 IPYVEIKFATHNFDRKLVMGKGAFGNVYRGTLRN  127 (154)
Q Consensus        94 ~~~~~l~~at~~f~~~~~iG~g~~g~vy~g~l~~  127 (154)
                      +--+|.+.+.. ....+.||+|+||+||.|.-++
T Consensus       985 yv~deWe~~r~-it~~relg~gsfg~Vy~g~~nn 1017 (1025)
T KOG4258|consen  985 YVPDEWEVSRE-ITLGRELGQGSFGMVYEGNANN 1017 (1025)
T ss_pred             CChhHHHHHHH-HhhhhhhccCccceEEEecCCc
Confidence            33355555544 5666779999999999998754

>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]

Probab=85.28  E-value=0.17  Score=39.99  Aligned_cols=34  Identities=32%  Similarity=0.492  Sum_probs=27.6

Q ss_pred             cCccccceeecCCCcceEEEEeC-CCCEEEEEEec
Q 043043          104 HNFDRKLVMGKGAFGNVYRGTLR-NSMKVAVKRGE  137 (154)
Q Consensus       104 ~~f~~~~~iG~g~~g~vy~g~l~-~g~~vaVK~l~  137 (154)
                      +.|..-++||+|+||+||-.+.. .|...|.|+|+
T Consensus       185 n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~  219 (591)
T KOG0986|consen  185 NTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLD  219 (591)
T ss_pred             cceeeeEEEecccccceeEEEEecchhhHHHHHHH
Confidence            44777789999999999988775 46778888884

>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=85.23  E-value=0.72  Score=35.31  Aligned_cols=31  Identities=32%  Similarity=0.550  Sum_probs=25.0

Q ss_pred             ccccceeecCCCcceEEEE-eCCCCEEEEEEe
Q 043043          106 FDRKLVMGKGAFGNVYRGT-LRNSMKVAVKRG  136 (154)
Q Consensus       106 f~~~~~iG~g~~g~vy~g~-l~~g~~vaVK~l  136 (154)
                      |.-...||+|.||..+.|. +=++.+||+|-=
T Consensus        30 yrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfE   61 (449)
T KOG1165|consen   30 YRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFE   61 (449)
T ss_pred             ceeccccccCcceeeecccccccCceEEEEec
Confidence            4445779999999999986 446799999864

>PF10577 UPF0560: Uncharacterised protein family UPF0560; InterPro: IPR018890 This family of proteins has no known function

Probab=85.17  E-value=0.6  Score=39.23  Aligned_cols=25  Identities=16%  Similarity=0.134  Sum_probs=10.7

Q ss_pred             EehhHHHHHHHHHHHHHHHHHHHHh
Q 043043           25 VGSVLACSVLICILEIVLSFVLIWR   49 (154)
Q Consensus        25 i~~~v~~~vll~i~~~~~~~~~~~r   49 (154)
                      .+|+.+.++++++++++++|+||||
T Consensus       276 l~ILG~~~livl~lL~vLl~yCrrk  300 (807)
T PF10577_consen  276 LAILGGTALIVLILLCVLLCYCRRK  300 (807)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhhcc
Confidence            3344334444444444444444443

>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]

Probab=84.84  E-value=1.6  Score=32.66  Aligned_cols=27  Identities=30%  Similarity=0.518  Sum_probs=23.6

Q ss_pred             eeecCCCcceEEEEeCC-CCEEEEEEec
Q 043043          111 VMGKGAFGNVYRGTLRN-SMKVAVKRGE  137 (154)
Q Consensus       111 ~iG~g~~g~vy~g~l~~-g~~vaVK~l~  137 (154)
                      .||.|..|.|++..+.. |..+|||...
T Consensus        99 dlGsGtcG~V~k~~~rs~~~iiAVK~M~  126 (391)
T KOG0983|consen   99 DLGSGTCGQVWKMRFRSTGHIIAVKQMR  126 (391)
T ss_pred             hhcCCCccceEEEEEcccceEEEEEeec
Confidence            48999999999998864 7889999985

>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]

Probab=84.67  E-value=0.24  Score=40.41  Aligned_cols=31  Identities=39%  Similarity=0.453  Sum_probs=25.9

Q ss_pred             ccceeecCCCcceEEEEeCCCCEEEEEEecCC
Q 043043          108 RKLVMGKGAFGNVYRGTLRNSMKVAVKRGETG  139 (154)
Q Consensus       108 ~~~~iG~g~~g~vy~g~l~~g~~vaVK~l~~~  139 (154)
                      +..-||.|.-|.||.|+|.+ ..||||++...
T Consensus       128 ELeWlGSGaQGAVF~Grl~n-etVAVKKV~el  158 (904)
T KOG4721|consen  128 ELEWLGSGAQGAVFLGRLHN-ETVAVKKVREL  158 (904)
T ss_pred             hhhhhccCcccceeeeeccC-ceehhHHHhhh
Confidence            34669999999999999976 77999998543

>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]

Probab=84.19  E-value=0.2  Score=39.68  Aligned_cols=27  Identities=37%  Similarity=0.609  Sum_probs=22.4

Q ss_pred             ceeecCCCcceEEEE-eCCCCEEEEEEe
Q 043043          110 LVMGKGAFGNVYRGT-LRNSMKVAVKRG  136 (154)
Q Consensus       110 ~~iG~g~~g~vy~g~-l~~g~~vaVK~l  136 (154)
                      ++||+|+|.+||++. +.+...||||.-
T Consensus       469 hLLGrGGFSEVyKAFDl~EqRYvAvKIH  496 (775)
T KOG1151|consen  469 HLLGRGGFSEVYKAFDLTEQRYVAVKIH  496 (775)
T ss_pred             HHhccccHHHHHHhcccchhheeeEeee
Confidence            479999999999986 445578999976

>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]

Probab=84.08  E-value=0.06  Score=39.47  Aligned_cols=27  Identities=37%  Similarity=0.712  Sum_probs=22.3

Q ss_pred             ceeecCCCcceEEEEeCC-CCEEEEEEe
Q 043043          110 LVMGKGAFGNVYRGTLRN-SMKVAVKRG  136 (154)
Q Consensus       110 ~~iG~g~~g~vy~g~l~~-g~~vaVK~l  136 (154)
                      ++||+|.||+||+++-.+ |..||+|+.
T Consensus        23 ~kigqGtfgeVFkAr~~n~~kkvalkkv   50 (376)
T KOG0669|consen   23 AKIGQGTFGEVFKARSKNTGKKVALKKV   50 (376)
T ss_pred             HhcCCchHHHHHHHhhcCccchhHHHHH
Confidence            569999999999998754 567888876

>PF02480 Herpes_gE: Alphaherpesvirus glycoprotein E; InterPro: IPR003404 Glycoprotein E (gE) of Alphaherpesvirus forms a complex with glycoprotein I (gI), functioning as an immunoglobulin G (IgG) Fc binding protein

Probab=83.89  E-value=0.33  Score=38.36  Aligned_cols=33  Identities=18%  Similarity=0.175  Sum_probs=0.0

Q ss_pred             ceeEEEehhHHHHHHHHHHHHHHHHHHHHhcCCC
Q 043043           20 HFMAVVGSVLACSVLICILEIVLSFVLIWRKQKP   53 (154)
Q Consensus        20 ~~~~ii~~~v~~~vll~i~~~~~~~~~~~r~~~~   53 (154)
                      ...+++++++ +++++++++++++++++||+.+.
T Consensus       354 ~l~vVlgvav-livVv~viv~vc~~~rrrR~~~~  386 (439)
T PF02480_consen  354 LLGVVLGVAV-LIVVVGVIVWVCLRCRRRRRQRD  386 (439)
T ss_dssp             ----------------------------------
T ss_pred             hHHHHHHHHH-HHHHHHHHhheeeeehhcccccc
Confidence            3444445444 44444444455555444444433

gE is involved in virus spread but is not essential for propagation [].; GO: 0016020 membrane; PDB: 2GJ7_F 2GIY_B.

>PHA03099 epidermal growth factor-like protein (EGF-like protein); Provisional

Probab=83.44  E-value=0.81  Score=29.66  Aligned_cols=28  Identities=25%  Similarity=0.154  Sum_probs=13.4

Q ss_pred             EehhHHHHHHHHHHHHHHHHHHHHhcCC
Q 043043           25 VGSVLACSVLICILEIVLSFVLIWRKQK   52 (154)
Q Consensus        25 i~~~v~~~vll~i~~~~~~~~~~~r~~~   52 (154)
                      +.+++++.+++++.++.++++++-||++
T Consensus       103 ~~~il~il~~i~is~~~~~~yr~~r~~~  130 (139)
T PHA03099        103 SPGIVLVLVGIIITCCLLSVYRFTRRTK  130 (139)
T ss_pred             hhHHHHHHHHHHHHHHHHhhheeeeccc
Confidence            3444555555555554444444444443

>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]

Probab=82.03  E-value=1.3  Score=33.39  Aligned_cols=30  Identities=27%  Similarity=0.295  Sum_probs=25.2

Q ss_pred             ccceeecCCCcceEEEEeC-CCCEEEEEEec
Q 043043          108 RKLVMGKGAFGNVYRGTLR-NSMKVAVKRGE  137 (154)
Q Consensus       108 ~~~~iG~g~~g~vy~g~l~-~g~~vaVK~l~  137 (154)
                      ....||.|+||.|...+.+ +|...|.|.|+
T Consensus        48 ~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~   78 (355)
T KOG0616|consen   48 RLKTLGTGSFGRVHLVREKHSGNYYAMKVLD   78 (355)
T ss_pred             heeeeccCccceEEEEEEccCCceeehhhcC
Confidence            3467999999999998874 57889999995

>PF01102 Glycophorin_A: Glycophorin A; InterPro: IPR001195 Proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane

Probab=81.76  E-value=0.86  Score=29.48  Aligned_cols=37  Identities=11%  Similarity=-0.060  Sum_probs=15.6

Q ss_pred             CcceeEEEehhHHHHHHHHHHHHHHHHHHHHhcCCCCC
Q 043043           18 KKHFMAVVGSVLACSVLICILEIVLSFVLIWRKQKPDE   55 (154)
Q Consensus        18 ~~~~~~ii~~~v~~~vll~i~~~~~~~~~~~r~~~~~~   55 (154)
                      ....++++|+++|++. +++++++++.++|+|......
T Consensus        64 ~~i~~Ii~gv~aGvIg-~Illi~y~irR~~Kk~~~~~~  100 (122)
T PF01102_consen   64 PAIIGIIFGVMAGVIG-IILLISYCIRRLRKKSSSDVQ  100 (122)
T ss_dssp             TCHHHHHHHHHHHHHH-HHHHHHHHHHHHS--------
T ss_pred             cceeehhHHHHHHHHH-HHHHHHHHHHHHhccCCCCCC
Confidence            4455555665555544 444555555666666654443

Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins [Reid M.E., Lomas-Francis C. The Blood Group Antigen FactsBook Academic Press, London / San Diego, (1997)]. Glycophorin A (PAS-2) and glycophorin B (PAS-3) belong to the MNS blood group system and are associated with antigens that include M/N, S/s, U, He, Mi(a), M(c), Vw, Mur, M(g), Vr, M(e), Mt(a), St(a), Ri(a), Cl(a), Ny(a), Hut, Hil, M(v), Far, Mit, Dantu, Hop, Nob, En(a), ENKT, amongst others. Glycophorin A is the major sialoglycoprotein of the erythrocyte membrane []. Structurally, glycophorin A consists of an N-terminal extracellular domain, heavily glycosylated on serine and threonine residues, followed by a transmembrane region and a C-terminal cytoplasmic domain. Other glycophorins in this entry such as Glycophorin B and Glycophorin E represent minor sialoglycoproteins in the erythrocyte membrane.; GO: 0016021 integral to membrane; PDB: 2KPF_B 1AFO_B 2KPE_A.

>PF14914 LRRC37AB_C: LRRC37A/B like protein 1 C-terminal domain

Probab=81.63  E-value=1.5  Score=29.19  Aligned_cols=23  Identities=17%  Similarity=0.197  Sum_probs=12.0

Q ss_pred             eEEEehhHHHHHHHHHHHHHHHH
Q 043043           22 MAVVGSVLACSVLICILEIVLSF   44 (154)
Q Consensus        22 ~~ii~~~v~~~vll~i~~~~~~~   44 (154)
                      .+|+++.+.+++.+++++++++-
T Consensus       120 klilaisvtvv~~iliii~CLie  142 (154)
T PF14914_consen  120 KLILAISVTVVVMILIIIFCLIE  142 (154)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHH
Confidence            45666655555555544444443

>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]

Probab=81.52  E-value=0.44  Score=41.66  Aligned_cols=56  Identities=21%  Similarity=0.261  Sum_probs=37.0

Q ss_pred             HHHHhhcCccccceeecCCCcceEEEEeCC-CCEEEEEEecCC--C-CCChHHHHHHHhh
Q 043043           98 EIKFATHNFDRKLVMGKGAFGNVYRGTLRN-SMKVAVKRGETG--S-GQGLPEFQTAIIV  153 (154)
Q Consensus        98 ~l~~at~~f~~~~~iG~g~~g~vy~g~l~~-g~~vaVK~l~~~--~-~~~~~~f~~e~~~  153 (154)
                      ++.-....|.-..+||+|+||+|...+..+ +...|.|+|+.+  . .....-|..|=++
T Consensus        69 ~lrl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDi  128 (1317)
T KOG0612|consen   69 ELRLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDI  128 (1317)
T ss_pred             HHhCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHH
Confidence            333334556667889999999999998864 567899999643  1 2222345555443

>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=80.08  E-value=0.57  Score=34.92  Aligned_cols=46  Identities=26%  Similarity=0.274  Sum_probs=31.0

Q ss_pred             ccceeecCCCcceEEEEe-CCCCEEEEEEecC--CCCCChHHHHHHHhh
Q 043043          108 RKLVMGKGAFGNVYRGTL-RNSMKVAVKRGET--GSGQGLPEFQTAIIV  153 (154)
Q Consensus       108 ~~~~iG~g~~g~vy~g~l-~~g~~vaVK~l~~--~~~~~~~~f~~e~~~  153 (154)
                      ..+-||-|.||.||...- ++|..||.|++-.  .+..+.+.|.+|+.+
T Consensus        57 PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~km  105 (449)
T KOG0664|consen   57 PDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKM  105 (449)
T ss_pred             CCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHH
Confidence            346699999999997765 4788999998832  122233456666654

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	154
2qkw_B	321	Structural Basis For Activation Of Plant Immunity B		3e-09
3hgk_A	327	Crystal Structure Of Effect Protein Avrptob Complex		4e-09
3tl8_A	349	The Avrptob-Bak1 Complex Reveals Two Structurally S		2e-05
3uim_A	326	Structural Basis For The Impact Of Phosphorylation		2e-05

>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By Bacterial Effector Protein Avrpto Length = 321

Iteration: 1
 Score = 57.4 bits (137), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 25/51 (49%), Positives = 36/51 (70%)
Query: 93  KIPYVEIKFATHNFDRKLVMGKGAFGNVYRGTLRNSMKVAVKRGETGSGQG 143
           ++P V+++ AT+NFD K ++G G FG VY+G LR+  KVA+KR    S QG
Sbjct: 28  RVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQG 78

>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With Kinase Pto Length = 327

Iteration: 1
 Score = 57.4 bits (137), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 25/51 (49%), Positives = 36/51 (70%)
Query: 93  KIPYVEIKFATHNFDRKLVMGKGAFGNVYRGTLRNSMKVAVKRGETGSGQG 143
           ++P V+++ AT+NFD K ++G G FG VY+G LR+  KVA+KR    S QG
Sbjct: 28  RVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQG 78

>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector Length = 349

Iteration: 1
 Score = 45.1 bits (105), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 23/55 (41%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Query: 98  EIKFATHNFDRKLVMGKGAFGNVYRGTLRNSMKVAVKRGETGSGQGLP-EFQTAI 151
           E++ A+ NF  K ++G+G FG VY+G L +   VAVKR +    QG   +FQT +
Sbjct: 32  ELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQTEV 86

>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On Plant Receptor- Like Kinase Bak1 Activation Length = 326

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 23/55 (41%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Query: 98  EIKFATHNFDRKLVMGKGAFGNVYRGTLRNSMKVAVKRGETGSGQGLP-EFQTAI 151
           E++ A+ NF  K ++G+G FG VY+G L +   VAVKR +    QG   +FQT +
Sbjct: 24  ELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQTEV 78

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	154
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	2e-22
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	2e-14
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	6e-12
3soc_A	322	Activin receptor type-2A; structural genomics cons	6e-07
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	1e-05
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	1e-05
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	1e-05
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	1e-05
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	2e-05
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	3e-05
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	4e-05
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	7e-05
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	1e-04
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	1e-04
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	1e-04
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	2e-04
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	2e-04
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	2e-04
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	2e-04
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	2e-04
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	3e-04
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	4e-04
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	4e-04
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	4e-04
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	5e-04
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	5e-04
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	5e-04
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	6e-04
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	6e-04
3pls_A	298	Macrophage-stimulating protein receptor; protein k	7e-04
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	7e-04
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	8e-04
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	8e-04
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	8e-04
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	8e-04
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	8e-04
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	9e-04
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	9e-04

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321

 Score = 90.0 bits (224), Expect = 2e-22
 Identities = 30/64 (46%), Positives = 43/64 (67%)

Query: 91  GLKIPYVEIKFATHNFDRKLVMGKGAFGNVYRGTLRNSMKVAVKRGETGSGQGLPEFQTA 150
             ++P V+++ AT+NFD K ++G G FG VY+G LR+  KVA+KR    S QG+ EF+T 
Sbjct: 26  SYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETE 85

Query: 151 IIVL 154
           I  L
Sbjct: 86  IETL 89

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326

 Score = 68.0 bits (167), Expect = 2e-14
 Identities = 23/60 (38%), Positives = 36/60 (60%), Gaps = 1/60 (1%)

Query: 96  YVEIKFATHNFDRKLVMGKGAFGNVYRGTLRNSMKVAVKRGETGSGQGLP-EFQTAIIVL 154
             E++ A+ NF  K ++G+G FG VY+G L +   VAVKR +    QG   +FQT + ++
Sbjct: 22  LRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMI 81

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307

 Score = 60.6 bits (148), Expect = 6e-12
 Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 11/69 (15%)

Query: 96  YVEIKFATHNFDRKL------VMGKGAFGNVYRGTLRNSMKVAVKR----GETGSGQGLP 145
           + E+K  T+NFD +        MG+G FG VY+G + N+  VAVK+     +  + +   
Sbjct: 17  FYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQ 75

Query: 146 EFQTAIIVL 154
           +F   I V+
Sbjct: 76  QFDQEIKVM 84

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322

 Score = 46.6 bits (111), Expect = 6e-07
 Identities = 16/69 (23%), Positives = 28/69 (40%), Gaps = 2/69 (2%)

Query: 86  HNVNLGLKIPYVEIKFATHNFDRKLVMGKGAFGNVYRGTLRNSMKVAVKRGETGSGQGLP 145
           H+ + G+ +    + F +       V  +G FG V++  L N   VAVK       Q   
Sbjct: 6   HHHSSGVDLGTENLYFQSMPLQLLEVKARGRFGCVWKAQLLNE-YVAVKIFPIQDKQSW- 63

Query: 146 EFQTAIIVL 154
           + +  +  L
Sbjct: 64  QNEYEVYSL 72

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336

 Score = 42.9 bits (101), Expect = 1e-05
 Identities = 13/44 (29%), Positives = 21/44 (47%), Gaps = 1/44 (2%)

Query: 92  LKIPYVEIKFATHNFDRKLVMGKGAFGNVYRGTLRNSMKVAVKR 135
           ++    E      N     ++G+G +G VY+G+L     VAVK 
Sbjct: 1   MEAAASEPSLDLDNLKLLELIGRGRYGAVYKGSLDER-PVAVKV 43

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267

 Score = 42.6 bits (101), Expect = 1e-05
 Identities = 13/37 (35%), Positives = 19/37 (51%), Gaps = 2/37 (5%)

Query: 98  EIKFATHNFDRKLVMGKGAFGNVYRGTLRNSMKVAVK 134
            I  +   F +++  G G FG V+ G   N  KVA+K
Sbjct: 4   VIDPSELTFVQEI--GSGQFGLVHLGYWLNKDKVAIK 38

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283

 Score = 42.6 bits (101), Expect = 1e-05
 Identities = 12/29 (41%), Positives = 15/29 (51%), Gaps = 2/29 (6%)

Query: 106 FDRKLVMGKGAFGNVYRGTLRNSMKVAVK 134
           F ++L  G G FG V  G  R    VA+K
Sbjct: 28  FLKEL--GTGQFGVVKYGKWRGQYDVAIK 54

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656

 Score = 42.9 bits (101), Expect = 1e-05
 Identities = 23/109 (21%), Positives = 39/109 (35%), Gaps = 10/109 (9%)

Query: 35  ICILEIVLSFVLIWRKQKPDEFPLAMDWSLLHVHEGGGSHGGFPEGTGFPVHNVNLGLKI 94
            C L    +   I R QK  E  L      L  +E  G        +    +   +  + 
Sbjct: 317 YCRLVNGATQSFIIRPQKEGERAL-PSIPKLANNEKQGVRSHTVSVSETDDYAEIIDEED 375

Query: 95  PYVEIKFATHNFDRKLVM-----GKGAFGNVYRGTLRN----SMKVAVK 134
            Y       +   R+ +      G+G FG+V++G   +    +M VA+K
Sbjct: 376 TYTMPSTRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIK 424

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268

 Score = 42.2 bits (100), Expect = 2e-05
 Identities = 11/29 (37%), Positives = 14/29 (48%), Gaps = 2/29 (6%)

Query: 106 FDRKLVMGKGAFGNVYRGTLRNSMKVAVK 134
             ++L  G G FG V  G  +    VAVK
Sbjct: 12  LLKEL--GSGQFGVVKLGKWKGQYDVAVK 38

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279

 Score = 41.4 bits (98), Expect = 3e-05
 Identities = 12/29 (41%), Positives = 14/29 (48%), Gaps = 2/29 (6%)

Query: 106 FDRKLVMGKGAFGNVYRGTLRNSMKVAVK 134
              +L  G G FG V+ G      KVAVK
Sbjct: 17  LVERL--GAGQFGEVWMGYYNGHTKVAVK 43

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309

 Score = 41.1 bits (97), Expect = 4e-05
 Identities = 16/59 (27%), Positives = 27/59 (45%), Gaps = 5/59 (8%)

Query: 98  EIKFATHNFDRKLVMGKGAFGNVYRGTLRNSMKVAVK--RGETGSGQGLPEFQTAIIVL 154
           +I +   N   K+  G G+FG V+R     S  VAVK    +    + + EF   + ++
Sbjct: 33  DIPWCDLNIKEKI--GAGSFGTVHRAEWHGS-DVAVKILMEQDFHAERVNEFLREVAIM 88

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535

 Score = 40.6 bits (95), Expect = 7e-05
 Identities = 12/29 (41%), Positives = 18/29 (62%), Gaps = 2/29 (6%)

Query: 106 FDRKLVMGKGAFGNVYRGTLRNSMKVAVK 134
            + KL  G+G FG V+ GT   + +VA+K
Sbjct: 271 LEVKL--GQGCFGEVWMGTWNGTTRVAIK 297

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452

 Score = 40.1 bits (94), Expect = 1e-04
 Identities = 12/29 (41%), Positives = 18/29 (62%), Gaps = 2/29 (6%)

Query: 106 FDRKLVMGKGAFGNVYRGTLRNSMKVAVK 134
            + KL  G+G FG V+ GT   + +VA+K
Sbjct: 188 LEVKL--GQGCFGEVWMGTWNGTTRVAIK 214

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271

 Score = 39.6 bits (93), Expect = 1e-04
 Identities = 15/38 (39%), Positives = 18/38 (47%), Gaps = 3/38 (7%)

Query: 98  EIKFATHNFDRKLVMGKGAFGNVYRGTLRNSMKVAVKR 135
           EI FA    +  +  G G FG VYR       +VAVK 
Sbjct: 3   EIDFAELTLEEII--GIGGFGKVYRAFWIGD-EVAVKA 37

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307

 Score = 39.6 bits (93), Expect = 1e-04
 Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 8/42 (19%)

Query: 94  IPYVEIKFATHNFDRKLVMGKGAFGNVYRGTLRNSMKVAVKR 135
           I Y EI+          V+G+GAFG V +   R    VA+K+
Sbjct: 5   IDYKEIEVEE-------VVGRGAFGVVCKAKWRAK-DVAIKQ 38

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454

 Score = 39.7 bits (93), Expect = 2e-04
 Identities = 13/29 (44%), Positives = 16/29 (55%), Gaps = 2/29 (6%)

Query: 106 FDRKLVMGKGAFGNVYRGTLRNSMKVAVK 134
            ++KL  G G FG V+  T     KVAVK
Sbjct: 192 LEKKL--GAGQFGEVWMATYNKHTKVAVK 218

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291

 Score = 39.2 bits (92), Expect = 2e-04
 Identities = 15/57 (26%), Positives = 21/57 (36%), Gaps = 9/57 (15%)

Query: 98  EIKFATHNFDRKLVMGKGAFGNVYRGTLR----NSMKVAVK---RGETGSGQGLPEF 147
            I         KL  G G+FG V RG        ++ VAVK          + + +F
Sbjct: 14  LIGEKDLRLLEKL--GDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDF 68

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313

 Score = 39.2 bits (92), Expect = 2e-04
 Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 8/70 (11%)

Query: 84  PVHNVNLGLKIPYVEIKFATHNFDRKLVMGKGAFGNVYRGTLRN----SMKVAVK--RGE 137
           P  +  L  K+  V I        + L  G+G FG+V  G L+     S+KVAVK  + +
Sbjct: 16  PRGSEELQNKLEDVVIDRNLLILGKIL--GEGEFGSVMEGNLKQEDGTSLKVAVKTMKLD 73

Query: 138 TGSGQGLPEF 147
             S + + EF
Sbjct: 74  NSSQREIEEF 83

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327

 Score = 39.2 bits (92), Expect = 2e-04
 Identities = 9/32 (28%), Positives = 15/32 (46%), Gaps = 5/32 (15%)

Query: 106 FDRKLVMGKGAFGNVYRGTLRN---SMKVAVK 134
           F   +  G+G FG V +  ++     M  A+K
Sbjct: 29  FQDVI--GEGNFGQVLKARIKKDGLRMDAAIK 58

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319

 Score = 38.9 bits (91), Expect = 2e-04
 Identities = 18/87 (20%), Positives = 30/87 (34%), Gaps = 6/87 (6%)

Query: 70  GGGSHGGFPEGTGFPVHNVNLGLKIPYVEIKFATHNFDRKLVMGKGAFGNVYRGTLRNSM 129
           G   +        FP       + +   +I F        +  GKG FG VY G      
Sbjct: 1   GPEMNLSLLSARSFPRKASQTSIFLQEWDIPFEQLEIGELI--GKGRFGQVYHGRWHG-- 56

Query: 130 KVAVK--RGETGSGQGLPEFQTAIIVL 154
           +VA++    E  +   L  F+  ++  
Sbjct: 57  EVAIRLIDIERDNEDQLKAFKREVMAY 83

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377

 Score = 38.4 bits (90), Expect = 3e-04
 Identities = 12/30 (40%), Positives = 18/30 (60%), Gaps = 3/30 (10%)

Query: 106 FDRKLVMGKGAFGNVYRGTLR-NSMKVAVK 134
              ++  G+G FG V+ G LR ++  VAVK
Sbjct: 118 LGEQI--GRGNFGEVFSGRLRADNTLVAVK 145

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288

 Score = 38.4 bits (90), Expect = 4e-04
 Identities = 13/30 (43%), Positives = 16/30 (53%), Gaps = 3/30 (10%)

Query: 106 FDRKLVMGKGAFGNVYRGTLRN-SMKVAVK 134
              KL  G G +G VY G  +  S+ VAVK
Sbjct: 17  MKHKL--GGGQYGEVYEGVWKKYSLTVAVK 44

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323

 Score = 38.5 bits (90), Expect = 4e-04
 Identities = 17/46 (36%), Positives = 21/46 (45%), Gaps = 6/46 (13%)

Query: 93  KIPYVEIKFATHNFDRKLVMGKGAFGNVYRGTLRN----SMKVAVK 134
           K+  V I        R L  GKG FG+V    L+      +KVAVK
Sbjct: 14  KLEDVLIPEQQFTLGRML--GKGEFGSVREAQLKQEDGSFVKVAVK 57

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278

 Score = 38.0 bits (89), Expect = 4e-04
 Identities = 13/29 (44%), Positives = 17/29 (58%), Gaps = 3/29 (10%)

Query: 106 FDRKLVMGKGAFGNVYRGTLRNSMKVAVK 134
             + +  GKG FG+V  G  R + KVAVK
Sbjct: 25  LLQTI--GKGEFGDVMLGDYRGN-KVAVK 50

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337

 Score = 38.2 bits (89), Expect = 5e-04
 Identities = 12/23 (52%), Positives = 14/23 (60%), Gaps = 1/23 (4%)

Query: 113 GKGAFGNVYRGTLRNSMKVAVKR 135
           GKG +G V+ G  R   KVAVK 
Sbjct: 46  GKGRYGEVWMGKWRGE-KVAVKV 67

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 Length = 344

 Score = 38.1 bits (89), Expect = 5e-04
 Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 8/35 (22%)

Query: 106 FDRKLVMGKGAFGNVYRGTLRN------SMKVAVK 134
           F + L  G GAFG V   T         S++VAVK
Sbjct: 49  FGKVL--GSGAFGKVMNATAYGISKTGVSIQVAVK 81

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289

 Score = 37.7 bits (88), Expect = 6e-04
 Identities = 18/59 (30%), Positives = 26/59 (44%), Gaps = 6/59 (10%)

Query: 98  EIKFATHNFDRKLVMGKGAFGNVYRGTLRNSMKVAVK--RGETGSGQGLPEFQTAIIVL 154
           EI        +++  G G+FG VY+G       VAVK       + Q L  F+  + VL
Sbjct: 20  EIPDGQITVGQRI--GSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVL 74

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287

 Score = 37.7 bits (88), Expect = 6e-04
 Identities = 17/65 (26%), Positives = 31/65 (47%), Gaps = 10/65 (15%)

Query: 98  EIKFATHNFDRKLVMGKGAFGNVYRGTLR-NSMKVAVKR-------GETGSGQGLPEFQT 149
            +      +++++  GKG FG V++G L  +   VA+K        GET   +   EFQ 
Sbjct: 15  TLADNEIEYEKQI--GKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQR 72

Query: 150 AIIVL 154
            + ++
Sbjct: 73  EVFIM 77

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298

 Score = 37.6 bits (88), Expect = 7e-04
 Identities = 12/28 (42%), Positives = 16/28 (57%), Gaps = 4/28 (14%)

Query: 111 VMGKGAFGNVYRGTLR----NSMKVAVK 134
           V+GKG FG VY G       N ++ A+K
Sbjct: 28  VIGKGHFGVVYHGEYIDQAQNRIQCAIK 55

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373

 Score = 37.8 bits (88), Expect = 7e-04
 Identities = 13/28 (46%), Positives = 16/28 (57%), Gaps = 4/28 (14%)

Query: 111 VMGKGAFGNVYRGTLR----NSMKVAVK 134
           V+G+G FG VY GTL       +  AVK
Sbjct: 96  VIGRGHFGCVYHGTLLDNDGKKIHCAVK 123

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291

 Score = 37.6 bits (88), Expect = 8e-04
 Identities = 14/46 (30%), Positives = 19/46 (41%), Gaps = 7/46 (15%)

Query: 107 DRKLVMGKGAFGNVYRGTLRNS---MKVAVK--RGETGSGQGLPEF 147
           D++L  G G FG V +G  +       VAVK  + E        E 
Sbjct: 22  DKEL--GSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDEL 65

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342

 Score = 37.4 bits (87), Expect = 8e-04
 Identities = 13/23 (56%), Positives = 15/23 (65%), Gaps = 1/23 (4%)

Query: 113 GKGAFGNVYRGTLRNSMKVAVKR 135
           GKG FG V+RG  R   +VAVK 
Sbjct: 51  GKGRFGEVWRGKWRGE-EVAVKI 72

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313

 Score = 37.2 bits (87), Expect = 8e-04
 Identities = 14/35 (40%), Positives = 16/35 (45%), Gaps = 8/35 (22%)

Query: 106 FDRKLVMGKGAFGNVYRGTLRN------SMKVAVK 134
           F + L  G GAFG V   T         +M VAVK
Sbjct: 27  FGKTL--GAGAFGKVVEATAYGLIKSDAAMTVAVK 59

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432

 Score = 37.4 bits (87), Expect = 8e-04
 Identities = 12/31 (38%), Positives = 18/31 (58%)

Query: 105 NFDRKLVMGKGAFGNVYRGTLRNSMKVAVKR 135
           +F  K V+G GA G +    + ++  VAVKR
Sbjct: 25  SFCPKDVLGHGAEGTIVYRGMFDNRDVAVKR 55

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322

 Score = 37.3 bits (87), Expect = 9e-04
 Identities = 12/35 (34%), Positives = 18/35 (51%), Gaps = 8/35 (22%)

Query: 106 FDRKLVMGKGAFGNVYRGTLRN------SMKVAVK 134
             R+L  G+G+FG VY G  +         +VA+K
Sbjct: 29  MSREL--GQGSFGMVYEGVAKGVVKDEPETRVAIK 61

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281

 Score = 37.2 bits (87), Expect = 9e-04
 Identities = 13/49 (26%), Positives = 24/49 (48%), Gaps = 6/49 (12%)

Query: 90  LGLKIPYVEIKFATHNFDRKLVMGKGAFGNVYRGTLRN----SMKVAVK 134
           +G      EI+       R +  G+G FG+V++G   +    ++ VA+K
Sbjct: 3   MGSSTRDYEIQRERIELGRCI--GEGQFGDVHQGIYMSPENPALAVAIK 49

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	154
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	98.52
4aoj_A	329	High affinity nerve growth factor receptor; transf	98.44
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	98.41
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	98.25
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	98.24
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	98.15
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	98.14
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	98.01
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	97.98
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	97.93
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	97.91
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	97.81
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	97.75
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	97.68
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	97.68
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	97.64
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	97.64
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	97.6
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	97.54
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	97.54
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	97.53
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	97.53
2jwa_A	44	Receptor tyrosine-protein kinase ERBB-2; transmemb	97.52
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	97.52
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	97.49
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	97.49
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	97.47
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	97.46
3niz_A	311	Rhodanese family protein; structural genomics, str	97.45
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	97.44
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	97.43
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	97.42
2l2t_A	44	Receptor tyrosine-protein kinase ERBB-4; transmemb	97.4
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	97.39
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	97.39
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	97.38
2ks1_B	44	Epidermal growth factor receptor; ERBB1, ERBB2, tr	97.37
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	97.33
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	97.33
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	97.33
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	97.32
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	97.32
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	97.32
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	97.32
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	97.31
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	97.3
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	97.3
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	97.3
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	97.3
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	97.29
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	97.25
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	97.25
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	97.24
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	97.23
1zar_A	282	RIO2 kinase; serine kinase, winged-helix, RIO doma	97.23
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	97.22
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	97.22
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	97.22
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	97.21
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	97.21
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	97.21
3o0g_A	292	Cell division protein kinase 5; kinase activator c	97.2
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	97.19
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	97.19
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	97.18
3uqc_A	286	Probable conserved transmembrane protein; structur	97.16
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	97.15
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	97.15
3q4u_A	301	Activin receptor type-1; structural genomics conso	97.14
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	97.13
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	97.12
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	97.12
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	97.09
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	97.08
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	97.08
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	97.07
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	97.07
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	97.07
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	97.06
3ork_A	311	Serine/threonine protein kinase; structural genomi	97.04
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	97.03
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	97.02
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	97.02
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	97.02
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	97.01
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	97.01
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	97.01
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	97.01
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	97.01
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	97.0
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	97.0
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	97.0
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	96.99
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	96.99
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	96.98
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	96.97
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	96.97
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	96.95
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	96.94
3soc_A	322	Activin receptor type-2A; structural genomics cons	96.94
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	96.93
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	96.92
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	96.92
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	96.91
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	96.9
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	96.89
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	96.89
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	96.89
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	96.88
3rp9_A	458	Mitogen-activated protein kinase; structural genom	96.88
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	96.86
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	96.86
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	96.86
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	96.86
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	96.84
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	96.84
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	96.84
3bhy_A	283	Death-associated protein kinase 3; death associate	96.84
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	96.83
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	96.83
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	96.83
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	96.82
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	96.82
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	96.82
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	96.82
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	96.81
2a19_B	284	Interferon-induced, double-stranded RNA-activated	96.81
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	96.81
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	96.8
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	96.79
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	96.78
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	96.78
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	96.77
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	96.77
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	96.76
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	96.76
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	96.75
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	96.74
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	96.74
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	96.73
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	96.73
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	96.72
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	96.72
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	96.71
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	96.71
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	96.71
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	96.71
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	96.71
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	96.7
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	96.7
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	96.7
2k1k_A	38	Ephrin type-A receptor 1; EPHA1, receptor tyrosine	96.7
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	96.68
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	96.68
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	96.67
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	96.67
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	96.66
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	96.66
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	96.66
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	96.66
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	96.65
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	96.64
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	96.63
1zth_A	258	RIO1 serine protein kinase; ribosome biogenesis, r	96.63
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	96.63
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	96.62
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	96.61
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	96.61
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	96.61
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	96.61
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	96.6
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	96.6
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	96.6
3pls_A	298	Macrophage-stimulating protein receptor; protein k	96.59
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	96.58
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	96.58
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	96.57
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	96.57
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	96.57
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	96.56
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	96.56
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	96.56
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	96.56
3an0_A	340	Dual specificity mitogen-activated protein kinase;	96.55
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	96.55
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	96.55
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	96.54
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	96.53
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	96.53
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	96.53
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	96.52
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	96.52
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	96.52
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	96.51
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	96.51
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	96.51
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	96.5
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	96.49
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	96.48
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	96.48
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	96.47
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	96.45
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	96.45
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	96.45
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	96.45
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	96.44
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	96.44
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	96.43
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	96.43
3aln_A	327	Dual specificity mitogen-activated protein kinase;	96.42
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	96.42
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	96.42
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	96.41
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	96.41
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	96.39
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	96.38
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	96.38
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	96.37
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	96.37
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	96.36
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	96.36
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	96.35
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	96.35
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	96.34
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	96.33
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	96.33
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	96.31
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	96.29
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	96.27
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	96.25
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	96.24
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	96.24
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	96.23
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	96.23
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	96.22
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	96.2
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	96.19
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	96.14
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	96.14
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	96.1
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	96.06
3fme_A	290	Dual specificity mitogen-activated protein kinase;	96.01
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	96.0
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	95.92
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	95.91
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	95.91
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	95.91
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	95.89
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	95.81
2dyl_A	318	Dual specificity mitogen-activated protein kinase	95.8
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	95.71
4gyi_A	397	RIO2 kinase; protein kinase, ADP complex, phosphoa	95.5
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	95.47
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	95.37
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	95.34
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	95.29
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	95.22
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	94.23
3d1u_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	94.02
1iij_A	35	ERBB-2 receptor protein-tyrosine kinase; alpha-hel	93.06
3f7w_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	91.46
2l8s_A	54	Integrin alpha-1; transmembrane region, detergent	90.22
2klu_A	70	T-cell surface glycoprotein CD4; cell membrane, di	88.73
2knc_A	54	Integrin alpha-IIB; transmembrane signaling, prote	88.17
1q55_A	880	EP-cadherin, C-cadherin; trans interaction, desmos	83.86
2l34_A	33	TYRO protein tyrosine kinase-binding protein; immu	81.49
2k1a_A	42	Integrin alpha-IIB; single-PASS transmembrane segm	80.12
2llm_A	43	Amyloid beta A4 protein; alzheimer'S disease, prot	81.17

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=98.52  E-value=3e-08  Score=73.02  Aligned_cols=46  Identities=28%  Similarity=0.439  Sum_probs=34.6

Q ss_pred             cceeecCCCcceEEEEeC------CCCEEEEEEecCC-CCCChHHHHHHHhhC
Q 043043          109 KLVMGKGAFGNVYRGTLR------NSMKVAVKRGETG-SGQGLPEFQTAIIVL  154 (154)
Q Consensus       109 ~~~iG~g~~g~vy~g~l~------~g~~vaVK~l~~~-~~~~~~~f~~e~~~l  154 (154)
                      .+.||+|+||.||+|.+.      ++..||||++... .....++|.+|+.+|
T Consensus        31 ~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il   83 (308)
T 4gt4_A           31 MEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLR   83 (308)
T ss_dssp             EEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHH
T ss_pred             eeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHH
Confidence            356999999999999983      4578999999643 333457899999764

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=98.44  E-value=7.8e-08  Score=71.39  Aligned_cols=50  Identities=32%  Similarity=0.442  Sum_probs=38.9

Q ss_pred             CccccceeecCCCcceEEEEeC------CCCEEEEEEecCCCCCChHHHHHHHhhC
Q 043043          105 NFDRKLVMGKGAFGNVYRGTLR------NSMKVAVKRGETGSGQGLPEFQTAIIVL  154 (154)
Q Consensus       105 ~f~~~~~iG~g~~g~vy~g~l~------~g~~vaVK~l~~~~~~~~~~f~~e~~~l  154 (154)
                      +|...+.||+|+||.||+|.+.      ++..||||.+...+....++|.+|+++|
T Consensus        42 d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il   97 (329)
T 4aoj_A           42 DIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELL   97 (329)
T ss_dssp             GEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHH
T ss_pred             HeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHH
Confidence            3455577999999999999975      3678999999755444457899999864

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=98.41  E-value=1.1e-07  Score=69.66  Aligned_cols=50  Identities=30%  Similarity=0.415  Sum_probs=36.9

Q ss_pred             CccccceeecCCCcceEEEEeC------CCCEEEEEEecCCCCCChHHHHHHHhhC
Q 043043          105 NFDRKLVMGKGAFGNVYRGTLR------NSMKVAVKRGETGSGQGLPEFQTAIIVL  154 (154)
Q Consensus       105 ~f~~~~~iG~g~~g~vy~g~l~------~g~~vaVK~l~~~~~~~~~~f~~e~~~l  154 (154)
                      +|...+.||+|+||.||+|.+.      ++..||||++...+....++|.+|+++|
T Consensus        14 ~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il   69 (299)
T 4asz_A           14 NIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELL   69 (299)
T ss_dssp             GEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHH
T ss_pred             HeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHH
Confidence            3445577999999999999874      3678999999755444557899999864

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=98.25  E-value=1e-06  Score=64.43  Aligned_cols=64  Identities=34%  Similarity=0.579  Sum_probs=51.5

Q ss_pred             cccccHHHHHHhhcCccccceeecCCCcceEEEEeCCCCEEEEEEecCCC-CCChHHHHHHHhhC
Q 043043           91 GLKIPYVEIKFATHNFDRKLVMGKGAFGNVYRGTLRNSMKVAVKRGETGS-GQGLPEFQTAIIVL  154 (154)
Q Consensus        91 ~~~~~~~~l~~at~~f~~~~~iG~g~~g~vy~g~l~~g~~vaVK~l~~~~-~~~~~~f~~e~~~l  154 (154)
                      ...+++.++...+++|...+.||+|+||.||++...++..||||.+.... ......|.+|++++
T Consensus        17 ~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l   81 (326)
T 3uim_A           17 LKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMI   81 (326)
T ss_dssp             CEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGG
T ss_pred             cceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHH
Confidence            45788999999999999999999999999999998889999999996432 22334688888653

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=98.24  E-value=4.2e-07  Score=66.53  Aligned_cols=62  Identities=48%  Similarity=0.870  Sum_probs=50.1

Q ss_pred             cccHHHHHHhhcCccccceeecCCCcceEEEEeCCCCEEEEEEecCCCCCChHHHHHHHhhC
Q 043043           93 KIPYVEIKFATHNFDRKLVMGKGAFGNVYRGTLRNSMKVAVKRGETGSGQGLPEFQTAIIVL  154 (154)
Q Consensus        93 ~~~~~~l~~at~~f~~~~~iG~g~~g~vy~g~l~~g~~vaVK~l~~~~~~~~~~f~~e~~~l  154 (154)
                      .+++.++...+++|.....||+|+||.||++...++..||+|.+..........|.+|+++|
T Consensus        28 ~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l   89 (321)
T 2qkw_B           28 RVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETL   89 (321)
T ss_dssp             --CCSCCCCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGG
T ss_pred             eecHHHHHHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHH
Confidence            45566677788899999999999999999999988999999998765555567788888754

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=98.15  E-value=3.8e-06  Score=61.65  Aligned_cols=62  Identities=19%  Similarity=0.186  Sum_probs=48.6

Q ss_pred             ccccHHHHHHhhcC----------ccccceeecCCCcceEEEEeC-CCCEEEEEEecCCCCCChHHHHHHHhh
Q 043043           92 LKIPYVEIKFATHN----------FDRKLVMGKGAFGNVYRGTLR-NSMKVAVKRGETGSGQGLPEFQTAIIV  153 (154)
Q Consensus        92 ~~~~~~~l~~at~~----------f~~~~~iG~g~~g~vy~g~l~-~g~~vaVK~l~~~~~~~~~~f~~e~~~  153 (154)
                      ..++++++..+++.          |.....||+|+||.||++... +|..||||.+..........|.+|+.+
T Consensus        23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~   95 (321)
T 2c30_A           23 GVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVI   95 (321)
T ss_dssp             --CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHH
T ss_pred             CcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHH
Confidence            35788888888765          444568999999999999986 689999999976655566778888865

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=98.14  E-value=4.6e-06  Score=60.43  Aligned_cols=61  Identities=36%  Similarity=0.541  Sum_probs=49.1

Q ss_pred             ccccHHHHHHhhcCcccc------ceeecCCCcceEEEEeCCCCEEEEEEecCCC----CCChHHHHHHHhh
Q 043043           92 LKIPYVEIKFATHNFDRK------LVMGKGAFGNVYRGTLRNSMKVAVKRGETGS----GQGLPEFQTAIIV  153 (154)
Q Consensus        92 ~~~~~~~l~~at~~f~~~------~~iG~g~~g~vy~g~l~~g~~vaVK~l~~~~----~~~~~~f~~e~~~  153 (154)
                      ..|++.++..++.+|+..      +.||+|+||.||++.. ++..||||.+....    ......|.+|+.+
T Consensus        13 ~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~   83 (307)
T 2nru_A           13 HSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKV   83 (307)
T ss_dssp             EECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHH
T ss_pred             CcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHH
Confidence            468999999999999988      8899999999999997 57899999995321    2224568888764

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=98.01  E-value=5e-06  Score=62.08  Aligned_cols=50  Identities=24%  Similarity=0.335  Sum_probs=39.4

Q ss_pred             CccccceeecCCCcceEEEEeC-CCCEEEEEEecCCCCCChHHHHHHHhhC
Q 043043          105 NFDRKLVMGKGAFGNVYRGTLR-NSMKVAVKRGETGSGQGLPEFQTAIIVL  154 (154)
Q Consensus       105 ~f~~~~~iG~g~~g~vy~g~l~-~g~~vaVK~l~~~~~~~~~~f~~e~~~l  154 (154)
                      .|.....||+|+||.||++.-. +|..||||.++.........|.+|+++|
T Consensus        75 ~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il  125 (346)
T 4fih_A           75 YLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIM  125 (346)
T ss_dssp             TEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHH
T ss_pred             hcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHH
Confidence            3555667999999999999874 6899999999654444556788898764

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=97.98  E-value=9.9e-06  Score=62.02  Aligned_cols=50  Identities=24%  Similarity=0.335  Sum_probs=40.3

Q ss_pred             CccccceeecCCCcceEEEEeC-CCCEEEEEEecCCCCCChHHHHHHHhhC
Q 043043          105 NFDRKLVMGKGAFGNVYRGTLR-NSMKVAVKRGETGSGQGLPEFQTAIIVL  154 (154)
Q Consensus       105 ~f~~~~~iG~g~~g~vy~g~l~-~g~~vaVK~l~~~~~~~~~~f~~e~~~l  154 (154)
                      .|.....||+|+||.||++.-. +|..||||.+..........+.+|+.+|
T Consensus       152 ~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il  202 (423)
T 4fie_A          152 YLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIM  202 (423)
T ss_dssp             TEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHH
T ss_pred             hcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHH
Confidence            4556678999999999999874 6899999999765555567789998764

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=97.93  E-value=3.6e-06  Score=61.87  Aligned_cols=48  Identities=29%  Similarity=0.477  Sum_probs=35.7

Q ss_pred             CccccceeecCCCcceEEEEeCCCCEEEEEEecCCC--CCChHHHHHHHhhC
Q 043043          105 NFDRKLVMGKGAFGNVYRGTLRNSMKVAVKRGETGS--GQGLPEFQTAIIVL  154 (154)
Q Consensus       105 ~f~~~~~iG~g~~g~vy~g~l~~g~~vaVK~l~~~~--~~~~~~f~~e~~~l  154 (154)
                      .+...+.||+|+||.||+|.+.+  .||||.+....  ....++|.+|+++|
T Consensus        37 ~l~l~~~iG~G~fG~Vy~~~~~~--~vAvK~~~~~~~~~~~~~~f~~E~~il   86 (307)
T 3omv_A           37 EVMLSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVL   86 (307)
T ss_dssp             SCCEEEECCCCSSSEEEEEESSS--EEEEEECCCSSCCHHHHHHHHHHHHHH
T ss_pred             HeEEeeEEeeCCCcEEEEEEECC--cEEEEEEEecCCCHHHHHHHHHHHHHH
Confidence            34455779999999999999864  59999996432  22346799998764

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=97.91  E-value=4.2e-06  Score=62.67  Aligned_cols=58  Identities=22%  Similarity=0.335  Sum_probs=41.4

Q ss_pred             HHHHHhhcCccccceeecCCCcceEEEEeCC------CCEEEEEEecCCCCC-ChHHHHHHHhhC
Q 043043           97 VEIKFATHNFDRKLVMGKGAFGNVYRGTLRN------SMKVAVKRGETGSGQ-GLPEFQTAIIVL  154 (154)
Q Consensus        97 ~~l~~at~~f~~~~~iG~g~~g~vy~g~l~~------g~~vaVK~l~~~~~~-~~~~f~~e~~~l  154 (154)
                      .+.+...++|...+.||+|+||.||+|...+      +..||||.+...... ..++|.+|+++|
T Consensus        57 ~~wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il  121 (353)
T 4ase_A           57 SKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKIL  121 (353)
T ss_dssp             HHHBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHH
T ss_pred             cccEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHH
Confidence            3344445667777889999999999998743      357999999643322 345799998764

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=97.81  E-value=7.4e-06  Score=59.90  Aligned_cols=49  Identities=20%  Similarity=0.337  Sum_probs=35.4

Q ss_pred             ccccceeecCCCcceEEEEe-CCCCEEEEEEecCCCC-CChHHHHHHHhhC
Q 043043          106 FDRKLVMGKGAFGNVYRGTL-RNSMKVAVKRGETGSG-QGLPEFQTAIIVL  154 (154)
Q Consensus       106 f~~~~~iG~g~~g~vy~g~l-~~g~~vaVK~l~~~~~-~~~~~f~~e~~~l  154 (154)
                      |...+.||+|+||.||++.- .+|..||||.+..... .....|.+|+++|
T Consensus         7 y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il   57 (299)
T 4g31_A            7 FEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKAL   57 (299)
T ss_dssp             EEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHH
T ss_pred             CEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHH
Confidence            56668899999999999986 4688999999964322 2235688898764

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=97.75  E-value=1.3e-05  Score=59.95  Aligned_cols=50  Identities=18%  Similarity=0.277  Sum_probs=31.8

Q ss_pred             CccccceeecCCCcceEEEEe-CCCCEEEEEEecCCC--CCChHHHHHHHhhC
Q 043043          105 NFDRKLVMGKGAFGNVYRGTL-RNSMKVAVKRGETGS--GQGLPEFQTAIIVL  154 (154)
Q Consensus       105 ~f~~~~~iG~g~~g~vy~g~l-~~g~~vaVK~l~~~~--~~~~~~f~~e~~~l  154 (154)
                      +|...+.||+|+||.||++.- .+|..||||.+....  ......|.+|+++|
T Consensus        25 ~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il   77 (350)
T 4b9d_A           25 KYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVL   77 (350)
T ss_dssp             CEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHH
T ss_pred             ceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHH
Confidence            455667899999999999986 468999999996432  22245788998764

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=97.68  E-value=4.3e-05  Score=55.24  Aligned_cols=50  Identities=24%  Similarity=0.278  Sum_probs=34.3

Q ss_pred             CccccceeecCCCcceEEEEe-CCCCEEEEEEecCC---CCCChHHHHHHHhhC
Q 043043          105 NFDRKLVMGKGAFGNVYRGTL-RNSMKVAVKRGETG---SGQGLPEFQTAIIVL  154 (154)
Q Consensus       105 ~f~~~~~iG~g~~g~vy~g~l-~~g~~vaVK~l~~~---~~~~~~~f~~e~~~l  154 (154)
                      +|...+.||+|+||.||++.- .+|..||+|.+...   .......|.+|+++|
T Consensus        14 ~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il   67 (275)
T 3hyh_A           14 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYL   67 (275)
T ss_dssp             CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHH
T ss_pred             CeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHH
Confidence            466667899999999999986 46899999999532   223346788998764

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=97.68  E-value=2.6e-05  Score=56.80  Aligned_cols=45  Identities=22%  Similarity=0.386  Sum_probs=34.4

Q ss_pred             ceeecCCCcceEEEEeC-CCCEEEEEEecCC--CCCChHHHHHHHhhC
Q 043043          110 LVMGKGAFGNVYRGTLR-NSMKVAVKRGETG--SGQGLPEFQTAIIVL  154 (154)
Q Consensus       110 ~~iG~g~~g~vy~g~l~-~g~~vaVK~l~~~--~~~~~~~f~~e~~~l  154 (154)
                      ..||+|+||.||+|... .+..||+|.+...  .......|.+|+++|
T Consensus        32 ~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il   79 (290)
T 3fpq_A           32 IEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEML   79 (290)
T ss_dssp             EEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHH
T ss_pred             eEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHH
Confidence            56999999999999874 5789999999533  222345689998764

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=97.64  E-value=6.1e-05  Score=55.81  Aligned_cols=60  Identities=18%  Similarity=0.249  Sum_probs=46.1

Q ss_pred             ccHHHHHHhhcCccccceeecCCCcceEEEEeCCCCEEEEEEecCCCCCC-----------hHHHHHHHhh
Q 043043           94 IPYVEIKFATHNFDRKLVMGKGAFGNVYRGTLRNSMKVAVKRGETGSGQG-----------LPEFQTAIIV  153 (154)
Q Consensus        94 ~~~~~l~~at~~f~~~~~iG~g~~g~vy~g~l~~g~~vaVK~l~~~~~~~-----------~~~f~~e~~~  153 (154)
                      ..+.++....++|...+.||+|+||.||++.-.+|..||||++.......           ...|.+|+++
T Consensus        12 ~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~   82 (362)
T 3pg1_A           12 DLIAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRL   82 (362)
T ss_dssp             HHHHHHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHH
T ss_pred             HHHHHHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHH
Confidence            34567777788899999999999999999998889999999994321111           1567788765

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=97.64  E-value=5.1e-05  Score=58.30  Aligned_cols=52  Identities=29%  Similarity=0.446  Sum_probs=41.4

Q ss_pred             hhcCccccceeecCCCcceEEEEeCCCCEEEEEEecCCCCCChHHHHHHHhhC
Q 043043          102 ATHNFDRKLVMGKGAFGNVYRGTLRNSMKVAVKRGETGSGQGLPEFQTAIIVL  154 (154)
Q Consensus       102 at~~f~~~~~iG~g~~g~vy~g~l~~g~~vaVK~l~~~~~~~~~~f~~e~~~l  154 (154)
                      ...+|...+.||+|+||.||+|...++..||||.+.... ....+|.+|+.+|
T Consensus       186 ~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l  237 (454)
T 1qcf_A          186 PRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVM  237 (454)
T ss_dssp             CGGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHH
T ss_pred             chHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCC-ccHHHHHHHHHHH
Confidence            344566667899999999999999888899999996432 3467899998753

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=97.60  E-value=3.7e-05  Score=58.40  Aligned_cols=50  Identities=18%  Similarity=0.264  Sum_probs=37.0

Q ss_pred             CccccceeecCCCcceEEEEe-CCCCEEEEEEecCCCC--CChHHHHHHHhhC
Q 043043          105 NFDRKLVMGKGAFGNVYRGTL-RNSMKVAVKRGETGSG--QGLPEFQTAIIVL  154 (154)
Q Consensus       105 ~f~~~~~iG~g~~g~vy~g~l-~~g~~vaVK~l~~~~~--~~~~~f~~e~~~l  154 (154)
                      .|.....||+|+||.||++.- .+|..||||++.....  .....+.+|+++|
T Consensus        55 ~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il  107 (398)
T 4b99_A           55 EYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKIL  107 (398)
T ss_dssp             SEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHH
T ss_pred             CeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHH
Confidence            355567899999999999986 4689999999954322  1235678888764

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=97.54  E-value=8.5e-05  Score=57.05  Aligned_cols=50  Identities=26%  Similarity=0.504  Sum_probs=39.8

Q ss_pred             cCccccceeecCCCcceEEEEeCCCCEEEEEEecCCCCCChHHHHHHHhhC
Q 043043          104 HNFDRKLVMGKGAFGNVYRGTLRNSMKVAVKRGETGSGQGLPEFQTAIIVL  154 (154)
Q Consensus       104 ~~f~~~~~iG~g~~g~vy~g~l~~g~~vaVK~l~~~~~~~~~~f~~e~~~l  154 (154)
                      .+|.....||+|+||.||+|...++..||||.+.... ....+|.+|+++|
T Consensus       184 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l  233 (452)
T 1fmk_A          184 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVM  233 (452)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTS-SCHHHHHHHHHHH
T ss_pred             hHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCC-CCHHHHHHHHHHH
Confidence            4455667899999999999999888889999996433 3457899998754

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=97.54  E-value=5.2e-05  Score=55.42  Aligned_cols=32  Identities=38%  Similarity=0.511  Sum_probs=26.9

Q ss_pred             cccceeecCCCcceEEEEeCCCCEEEEEEecCC
Q 043043          107 DRKLVMGKGAFGNVYRGTLRNSMKVAVKRGETG  139 (154)
Q Consensus       107 ~~~~~iG~g~~g~vy~g~l~~g~~vaVK~l~~~  139 (154)
                      ...+.||+|+||.||+|.+ +|..||||++...
T Consensus         6 ~L~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~   37 (303)
T 3hmm_A            6 VLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR   37 (303)
T ss_dssp             EEEEEEEECSSSEEEEEEE-TTEEEEEEEECGG
T ss_pred             EEEEEEeeCCCeEEEEEEE-CCEEEEEEEECcc
Confidence            3456799999999999998 5789999999543

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=97.53  E-value=6.6e-05  Score=54.62  Aligned_cols=50  Identities=22%  Similarity=0.388  Sum_probs=37.7

Q ss_pred             CccccceeecCCCcceEEEEeC-CCCEEEEEEecCCC-CCChHHHHHHHhhC
Q 043043          105 NFDRKLVMGKGAFGNVYRGTLR-NSMKVAVKRGETGS-GQGLPEFQTAIIVL  154 (154)
Q Consensus       105 ~f~~~~~iG~g~~g~vy~g~l~-~g~~vaVK~l~~~~-~~~~~~f~~e~~~l  154 (154)
                      +|...+.||+|+||.||++... ++..||||++.... ......|.+|+.+|
T Consensus         7 ~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l   58 (332)
T 3qd2_B            7 DFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKAL   58 (332)
T ss_dssp             HEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHH
T ss_pred             cCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHH
Confidence            3566688999999999999985 78999999996433 33346788888653

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=97.53  E-value=6.9e-05  Score=56.92  Aligned_cols=51  Identities=10%  Similarity=0.084  Sum_probs=37.2

Q ss_pred             hcCccccceeecCCCcceEEEEe-CCCCEEEEEEecCCC---CCChHHHHHHHhh
Q 043043          103 THNFDRKLVMGKGAFGNVYRGTL-RNSMKVAVKRGETGS---GQGLPEFQTAIIV  153 (154)
Q Consensus       103 t~~f~~~~~iG~g~~g~vy~g~l-~~g~~vaVK~l~~~~---~~~~~~f~~e~~~  153 (154)
                      +.+|...++||+|+||.||++.. .+|..||||.+....   ....+.|.+|+.+
T Consensus        77 ~~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~  131 (413)
T 3dzo_A           77 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLR  131 (413)
T ss_dssp             CEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHG
T ss_pred             ceeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHH
Confidence            34466678899999999999994 568999999986322   2234667777754

>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A

Probab=97.52  E-value=6.5e-05  Score=38.51  Aligned_cols=32  Identities=22%  Similarity=0.533  Sum_probs=16.4

Q ss_pred             ceeEEEehhHHHHHHHHHHHHHHHHHHHHhcCC
Q 043043           20 HFMAVVGSVLACSVLICILEIVLSFVLIWRKQK   52 (154)
Q Consensus        20 ~~~~ii~~~v~~~vll~i~~~~~~~~~~~r~~~   52 (154)
                      ....+++.++| +++++++++.++++.|||+.+
T Consensus        10 ~~~~Ia~~vVG-vll~vi~~l~~~~~~RRR~~~   41 (44)
T 2jwa_A           10 PLTSIISAVVG-ILLVVVLGVVFGILIKRRQQK   41 (44)
T ss_dssp             SHHHHHHHHHH-HHHHHHHHHHHHHHHHHHCSC
T ss_pred             cccchHHHHHH-HHHHHHHHHHHHhheehhhhh
Confidence            33445666666 444445555545554544443

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=97.52  E-value=9.3e-05  Score=58.12  Aligned_cols=48  Identities=27%  Similarity=0.516  Sum_probs=37.9

Q ss_pred             ccccceeecCCCcceEEEEeCCCCEEEEEEecCCCCCChHHHHHHHhhC
Q 043043          106 FDRKLVMGKGAFGNVYRGTLRNSMKVAVKRGETGSGQGLPEFQTAIIVL  154 (154)
Q Consensus       106 f~~~~~iG~g~~g~vy~g~l~~g~~vaVK~l~~~~~~~~~~f~~e~~~l  154 (154)
                      |.....||+|+||.||+|...++..||||.+.... ....+|.+|+++|
T Consensus       269 ~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l  316 (535)
T 2h8h_A          269 LRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVM  316 (535)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHH
T ss_pred             hhhheecccCCCeEEEEEEECCCceEEEEEeCCCC-CCHHHHHHHHHHH
Confidence            33445799999999999999888889999996433 3457899998764

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=97.49  E-value=0.00018  Score=51.50  Aligned_cols=48  Identities=25%  Similarity=0.447  Sum_probs=35.7

Q ss_pred             ccccceeecCCCcceEEEEe-CCCCEEEEEEecCCCCCChHHHHHHHhh
Q 043043          106 FDRKLVMGKGAFGNVYRGTL-RNSMKVAVKRGETGSGQGLPEFQTAIIV  153 (154)
Q Consensus       106 f~~~~~iG~g~~g~vy~g~l-~~g~~vaVK~l~~~~~~~~~~f~~e~~~  153 (154)
                      +.+..+||+|+||.||++.. .++..||+|.+..........|.+|+.+
T Consensus        24 ~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~   72 (295)
T 2clq_A           24 NGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIAL   72 (295)
T ss_dssp             TSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHH
T ss_pred             CCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHH
Confidence            44556899999999999986 4678999999975544445678888764

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=97.49  E-value=5.3e-05  Score=55.74  Aligned_cols=50  Identities=22%  Similarity=0.250  Sum_probs=38.3

Q ss_pred             CccccceeecCCCcceEEEEe-CCCCEEEEEEecC---CCCCChHHHHHHHhhC
Q 043043          105 NFDRKLVMGKGAFGNVYRGTL-RNSMKVAVKRGET---GSGQGLPEFQTAIIVL  154 (154)
Q Consensus       105 ~f~~~~~iG~g~~g~vy~g~l-~~g~~vaVK~l~~---~~~~~~~~f~~e~~~l  154 (154)
                      +|...++||+|+||.||++.- .+|..||+|.+..   ........+.+|+++|
T Consensus        33 dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il   86 (311)
T 4aw0_A           33 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVM   86 (311)
T ss_dssp             GEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHH
T ss_pred             ccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHH
Confidence            366667899999999999986 4688999999952   1234456788898764

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=97.47  E-value=5.9e-05  Score=54.24  Aligned_cols=49  Identities=27%  Similarity=0.377  Sum_probs=37.0

Q ss_pred             CccccceeecCCCcceEEEEe-----CCCCEEEEEEecCCCCCChHHHHHHHhh
Q 043043          105 NFDRKLVMGKGAFGNVYRGTL-----RNSMKVAVKRGETGSGQGLPEFQTAIIV  153 (154)
Q Consensus       105 ~f~~~~~iG~g~~g~vy~g~l-----~~g~~vaVK~l~~~~~~~~~~f~~e~~~  153 (154)
                      +|.....||+|+||.||++.+     .++..||||++..........|.+|+++
T Consensus        11 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~   64 (295)
T 3ugc_A           11 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEI   64 (295)
T ss_dssp             GEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHH
T ss_pred             HhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHH
Confidence            345567899999999999985     3578999999965443334678888765

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=97.46  E-value=8.3e-05  Score=54.53  Aligned_cols=49  Identities=24%  Similarity=0.449  Sum_probs=35.7

Q ss_pred             ccccceeecCCCcceEEEEeC----CCCEEEEEEecCC-CCCChHHHHHHHhhC
Q 043043          106 FDRKLVMGKGAFGNVYRGTLR----NSMKVAVKRGETG-SGQGLPEFQTAIIVL  154 (154)
Q Consensus       106 f~~~~~iG~g~~g~vy~g~l~----~g~~vaVK~l~~~-~~~~~~~f~~e~~~l  154 (154)
                      |...+.||+|+||.||+|...    .+..||||.+... .......|.+|+++|
T Consensus        51 y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l  104 (325)
T 3kul_A           51 IHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIM  104 (325)
T ss_dssp             EEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHH
T ss_pred             eEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHH
Confidence            445578999999999999984    3456999999643 222345688888653

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=97.45  E-value=0.0001  Score=53.71  Aligned_cols=49  Identities=20%  Similarity=0.268  Sum_probs=36.2

Q ss_pred             CccccceeecCCCcceEEEEeCCCCEEEEEEecCCC--CCChHHHHHHHhh
Q 043043          105 NFDRKLVMGKGAFGNVYRGTLRNSMKVAVKRGETGS--GQGLPEFQTAIIV  153 (154)
Q Consensus       105 ~f~~~~~iG~g~~g~vy~g~l~~g~~vaVK~l~~~~--~~~~~~f~~e~~~  153 (154)
                      +|...+.||+|+||.||++...++..||+|.+....  ......+.+|+++
T Consensus        22 ~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~   72 (311)
T 3niz_A           22 KYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISL   72 (311)
T ss_dssp             EEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHH
T ss_pred             hhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHH
Confidence            355567899999999999999889999999995332  2223567788765

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=97.44  E-value=0.00015  Score=51.38  Aligned_cols=48  Identities=29%  Similarity=0.308  Sum_probs=38.0

Q ss_pred             CccccceeecCCCcceEEEEeCCCCEEEEEEecCCCCCChHHHHHHHhh
Q 043043          105 NFDRKLVMGKGAFGNVYRGTLRNSMKVAVKRGETGSGQGLPEFQTAIIV  153 (154)
Q Consensus       105 ~f~~~~~iG~g~~g~vy~g~l~~g~~vaVK~l~~~~~~~~~~f~~e~~~  153 (154)
                      +|.....||+|+||.||++...++..||+|.+... .....+|.+|+++
T Consensus        11 ~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~   58 (269)
T 4hcu_A           11 ELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREG-AMSEEDFIEEAEV   58 (269)
T ss_dssp             GEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTT-SBCHHHHHHHHHH
T ss_pred             hceeeheecCCCccEEEEEEecCCCeEEEEEeccc-ccCHHHHHHHHHH
Confidence            35556789999999999999988889999999643 2235678888865

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=97.43  E-value=0.00015  Score=52.44  Aligned_cols=50  Identities=22%  Similarity=0.303  Sum_probs=39.2

Q ss_pred             cCccccceeecCCCcceEEEEe-CCCCEEEEEEecCCCCCChHHHHHHHhh
Q 043043          104 HNFDRKLVMGKGAFGNVYRGTL-RNSMKVAVKRGETGSGQGLPEFQTAIIV  153 (154)
Q Consensus       104 ~~f~~~~~iG~g~~g~vy~g~l-~~g~~vaVK~l~~~~~~~~~~f~~e~~~  153 (154)
                      ..|...+.||+|+||.||++.- .++..||+|.+..........+.+|+.+
T Consensus        20 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~   70 (297)
T 3fxz_A           20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILV   70 (297)
T ss_dssp             GTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHH
T ss_pred             hceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHH
Confidence            4566678899999999999985 5688999999965545556678888764

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=97.42  E-value=0.00014  Score=54.50  Aligned_cols=50  Identities=20%  Similarity=0.256  Sum_probs=36.6

Q ss_pred             hhcCccccceeecCCCcceEEEEeC----CCCEEEEEEecCCCCCChHHHHHHHhh
Q 043043          102 ATHNFDRKLVMGKGAFGNVYRGTLR----NSMKVAVKRGETGSGQGLPEFQTAIIV  153 (154)
Q Consensus       102 at~~f~~~~~iG~g~~g~vy~g~l~----~g~~vaVK~l~~~~~~~~~~f~~e~~~  153 (154)
                      -.+.|.-.+.||+|+||.||++.-.    .+..||+|.+...  .....+.+|+++
T Consensus        19 l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~--~~~~~~~~E~~~   72 (361)
T 4f9c_A           19 LSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPT--SHPIRIAAELQC   72 (361)
T ss_dssp             GGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTT--SCHHHHHHHHHH
T ss_pred             ccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEccc--cCHHHHHHHHHH
Confidence            3455777788999999999999742    3568999998542  234567778765

>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}

Probab=97.40  E-value=8.3e-05  Score=38.16  Aligned_cols=31  Identities=10%  Similarity=0.223  Sum_probs=15.2

Q ss_pred             eEEEehhHHHHHHHHHHHHHHHHHHHHhcCC
Q 043043           22 MAVVGSVLACSVLICILEIVLSFVLIWRKQK   52 (154)
Q Consensus        22 ~~ii~~~v~~~vll~i~~~~~~~~~~~r~~~   52 (154)
                      ..|++.+++++++++++++.++++.|||+.+
T Consensus        10 ~aIA~gVVgGv~~v~ii~~~~~~~~RRRr~~   40 (44)
T 2l2t_A           10 PLIAAGVIGGLFILVIVGLTFAVYVRRKSIK   40 (44)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHTTCSS
T ss_pred             ceEEEeehHHHHHHHHHHHHHHHHhhhhhhh
Confidence            3455555555555555554444444444433

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=97.39  E-value=0.00016  Score=51.88  Aligned_cols=50  Identities=18%  Similarity=0.240  Sum_probs=37.9

Q ss_pred             CccccceeecCCCcceEEEEeCCCCEEEEEEecCC--CCCChHHHHHHHhhC
Q 043043          105 NFDRKLVMGKGAFGNVYRGTLRNSMKVAVKRGETG--SGQGLPEFQTAIIVL  154 (154)
Q Consensus       105 ~f~~~~~iG~g~~g~vy~g~l~~g~~vaVK~l~~~--~~~~~~~f~~e~~~l  154 (154)
                      +|.....||+|+||.||++.-.++..+|+|.+...  .......+.+|+++|
T Consensus         3 ~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l   54 (288)
T 1ob3_A            3 KYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISIL   54 (288)
T ss_dssp             SEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGG
T ss_pred             cchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHH
Confidence            34556789999999999999887899999999532  222346788888754

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=97.39  E-value=0.00013  Score=53.82  Aligned_cols=49  Identities=14%  Similarity=0.169  Sum_probs=37.5

Q ss_pred             CccccceeecCCCcceEEEEeCCCCEEEEEEecCCCCC--ChHHHHHHHhh
Q 043043          105 NFDRKLVMGKGAFGNVYRGTLRNSMKVAVKRGETGSGQ--GLPEFQTAIIV  153 (154)
Q Consensus       105 ~f~~~~~iG~g~~g~vy~g~l~~g~~vaVK~l~~~~~~--~~~~f~~e~~~  153 (154)
                      .|...+.||+|+||.||++...++..||||.+......  ....|.+|+++
T Consensus        10 ~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~   60 (343)
T 3dbq_A           10 IYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAY   60 (343)
T ss_dssp             EEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHH
T ss_pred             EEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHH
Confidence            35556789999999999999888999999999643222  23567888765

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=97.38  E-value=0.0001  Score=53.44  Aligned_cols=50  Identities=22%  Similarity=0.272  Sum_probs=38.4

Q ss_pred             CccccceeecCCCcceEEEEeC-CCCEEEEEEecCCCCCChHHHHHHHhhC
Q 043043          105 NFDRKLVMGKGAFGNVYRGTLR-NSMKVAVKRGETGSGQGLPEFQTAIIVL  154 (154)
Q Consensus       105 ~f~~~~~iG~g~~g~vy~g~l~-~g~~vaVK~l~~~~~~~~~~f~~e~~~l  154 (154)
                      +|...+.||+|+||.||++... ++..||+|.+..........|.+|+++|
T Consensus        11 ~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l   61 (310)
T 3s95_A           11 DLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVM   61 (310)
T ss_dssp             GEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHH
T ss_pred             HeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHH
Confidence            4555678999999999999874 5789999998544444456788888653

>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}

Probab=97.37  E-value=0.00012  Score=37.59  Aligned_cols=31  Identities=6%  Similarity=0.254  Sum_probs=14.7

Q ss_pred             eeEEEehhHHHHHHHHHHHHHHHHHHHHhcC
Q 043043           21 FMAVVGSVLACSVLICILEIVLSFVLIWRKQ   51 (154)
Q Consensus        21 ~~~ii~~~v~~~vll~i~~~~~~~~~~~r~~   51 (154)
                      ...|++.+++++++++++++.++++.|||+.
T Consensus        10 ~~~IA~gVVgGv~~~~ii~~~~~~~~RRr~~   40 (44)
T 2ks1_B           10 IPSIATGMVGALLLLLVVALGIGLFMRRRHI   40 (44)
T ss_dssp             SSSSTHHHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred             cceEEeehhHHHHHHHHHHHHHHHHhhhhHh
Confidence            3345545555555554444444444444443

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=97.33  E-value=9.5e-05  Score=55.71  Aligned_cols=49  Identities=18%  Similarity=0.227  Sum_probs=37.8

Q ss_pred             ccccceeecCCCcceEEEEeCCCCEEEEEEecCCCC--CChHHHHHHHhhC
Q 043043          106 FDRKLVMGKGAFGNVYRGTLRNSMKVAVKRGETGSG--QGLPEFQTAIIVL  154 (154)
Q Consensus       106 f~~~~~iG~g~~g~vy~g~l~~g~~vaVK~l~~~~~--~~~~~f~~e~~~l  154 (154)
                      |...+.||+|+||.||++...++..||||.+.....  .....|.+|+.+|
T Consensus        58 y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l  108 (390)
T 2zmd_A           58 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYL  108 (390)
T ss_dssp             EEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHH
T ss_pred             eEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHH
Confidence            566678999999999999988889999999964322  2235688887653

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=97.33  E-value=0.00019  Score=55.07  Aligned_cols=48  Identities=31%  Similarity=0.433  Sum_probs=37.8

Q ss_pred             cCccccceeecCCCcceEEEEeCCCCEEEEEEecCCCCCChHHHHHHHhhC
Q 043043          104 HNFDRKLVMGKGAFGNVYRGTLRNSMKVAVKRGETGSGQGLPEFQTAIIVL  154 (154)
Q Consensus       104 ~~f~~~~~iG~g~~g~vy~g~l~~g~~vaVK~l~~~~~~~~~~f~~e~~~l  154 (154)
                      .+|...+.||+|+||.||+|... +..||||.+....  ...+|.+|+.+|
T Consensus       193 ~~~~~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l  240 (450)
T 1k9a_A          193 KELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVM  240 (450)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEET-TEEEEEEEESSCT--TSHHHHHHHHHH
T ss_pred             HHeEEEeeecCcCCeeEEEEEec-CCeEEEEEeCCch--HHHHHHHHHHHH
Confidence            34555678999999999999985 6799999996533  456799998753

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=97.33  E-value=0.00013  Score=53.60  Aligned_cols=48  Identities=25%  Similarity=0.416  Sum_probs=36.1

Q ss_pred             CccccceeecCCCcceEEEEeCCCCEEEEEEecCCC--------CCChHHHHHHHhh
Q 043043          105 NFDRKLVMGKGAFGNVYRGTLRNSMKVAVKRGETGS--------GQGLPEFQTAIIV  153 (154)
Q Consensus       105 ~f~~~~~iG~g~~g~vy~g~l~~g~~vaVK~l~~~~--------~~~~~~f~~e~~~  153 (154)
                      +|...+.||+|+||.||++.. +|..||||.+....        ......+.+|+.+
T Consensus        21 ~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~   76 (336)
T 2vuw_A           21 KLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIII   76 (336)
T ss_dssp             HHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHH
T ss_pred             cchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHH
Confidence            355567899999999999987 67999999995332        1223678888765

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=97.32  E-value=0.00018  Score=51.26  Aligned_cols=48  Identities=31%  Similarity=0.377  Sum_probs=35.2

Q ss_pred             CccccceeecCCCcceEEEEeCCCCEEEEEEecCCCCCChHHHHHHHhh
Q 043043          105 NFDRKLVMGKGAFGNVYRGTLRNSMKVAVKRGETGSGQGLPEFQTAIIV  153 (154)
Q Consensus       105 ~f~~~~~iG~g~~g~vy~g~l~~g~~vaVK~l~~~~~~~~~~f~~e~~~  153 (154)
                      +|.....||+|+||.||++...++..||+|.+.... ....+|.+|+++
T Consensus        25 ~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~   72 (283)
T 3gen_A           25 DLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKV   72 (283)
T ss_dssp             GEEEEEECC---CEEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHH
T ss_pred             HHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCC-CCHHHHHHHHHH
Confidence            455567899999999999999888899999996432 235678888865

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=97.32  E-value=0.00022  Score=50.77  Aligned_cols=49  Identities=29%  Similarity=0.386  Sum_probs=38.6

Q ss_pred             cCccccceeecCCCcceEEEEeCCCCEEEEEEecCCCCCChHHHHHHHhh
Q 043043          104 HNFDRKLVMGKGAFGNVYRGTLRNSMKVAVKRGETGSGQGLPEFQTAIIV  153 (154)
Q Consensus       104 ~~f~~~~~iG~g~~g~vy~g~l~~g~~vaVK~l~~~~~~~~~~f~~e~~~  153 (154)
                      ++|.....||+|+||.||++...++..||+|.+.... .....|.+|+++
T Consensus        13 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~   61 (279)
T 1qpc_A           13 ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANL   61 (279)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHH
T ss_pred             HhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCc-ccHHHHHHHHHH
Confidence            3455567899999999999999888899999996432 345678888865

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=97.32  E-value=0.00018  Score=53.76  Aligned_cols=49  Identities=10%  Similarity=0.102  Sum_probs=36.9

Q ss_pred             cCccccceeecCCCcceEEEEe-CCCCEEEEEEecCC---CCCChHHHHHHHh
Q 043043          104 HNFDRKLVMGKGAFGNVYRGTL-RNSMKVAVKRGETG---SGQGLPEFQTAII  152 (154)
Q Consensus       104 ~~f~~~~~iG~g~~g~vy~g~l-~~g~~vaVK~l~~~---~~~~~~~f~~e~~  152 (154)
                      .+|...+.||+|+||.||++.. .+|..||||.+...   .....+.|.+|++
T Consensus        73 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~  125 (377)
T 3byv_A           73 RTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVL  125 (377)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHH
T ss_pred             ceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHH
Confidence            3455567899999999999996 56899999999632   2233467888884

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=97.32  E-value=5.1e-05  Score=55.30  Aligned_cols=50  Identities=26%  Similarity=0.320  Sum_probs=37.3

Q ss_pred             hcCccccceeecCCCcceEEEEeCCCCEEEEEEecCCCCC--ChHHHHHHHhh
Q 043043          103 THNFDRKLVMGKGAFGNVYRGTLRNSMKVAVKRGETGSGQ--GLPEFQTAIIV  153 (154)
Q Consensus       103 t~~f~~~~~iG~g~~g~vy~g~l~~g~~vaVK~l~~~~~~--~~~~f~~e~~~  153 (154)
                      ..+|.....||+|+||.||++.. ++..||||.+......  ...+|.+|+++
T Consensus        36 ~~~y~i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~   87 (309)
T 3p86_A           36 WCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAI   87 (309)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHHHHHHHHHHHHH
T ss_pred             hhHceeeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHHHHHHHHHHHHH
Confidence            34566677899999999999987 5788999999543222  23568888765

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=97.31  E-value=8.2e-05  Score=55.75  Aligned_cols=51  Identities=27%  Similarity=0.478  Sum_probs=37.2

Q ss_pred             cCccccceeecCCCcceEEEEeC----CCCEEEEEEecCCC-CCChHHHHHHHhhC
Q 043043          104 HNFDRKLVMGKGAFGNVYRGTLR----NSMKVAVKRGETGS-GQGLPEFQTAIIVL  154 (154)
Q Consensus       104 ~~f~~~~~iG~g~~g~vy~g~l~----~g~~vaVK~l~~~~-~~~~~~f~~e~~~l  154 (154)
                      .+|...+.||+|+||.||+|...    ++..||||.+.... .....+|.+|+.+|
T Consensus        45 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l  100 (373)
T 2qol_A           45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM  100 (373)
T ss_dssp             GGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHH
T ss_pred             hhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHH
Confidence            35667789999999999999874    46789999996432 22345788888653

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=97.30  E-value=0.00032  Score=50.78  Aligned_cols=44  Identities=25%  Similarity=0.164  Sum_probs=35.5

Q ss_pred             ceeecCCCcceEEEEe-CCCCEEEEEEecCCCCCChHHHHHHHhh
Q 043043          110 LVMGKGAFGNVYRGTL-RNSMKVAVKRGETGSGQGLPEFQTAIIV  153 (154)
Q Consensus       110 ~~iG~g~~g~vy~g~l-~~g~~vaVK~l~~~~~~~~~~f~~e~~~  153 (154)
                      .+||+|+||.||++.- .++..||||.+..........+.+|+++
T Consensus        19 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~   63 (316)
T 2ac3_A           19 DVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEM   63 (316)
T ss_dssp             CCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHH
T ss_pred             ceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHH
Confidence            5699999999999985 4678999999975555556778888765

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=97.30  E-value=4.9e-05  Score=56.14  Aligned_cols=59  Identities=20%  Similarity=0.300  Sum_probs=42.3

Q ss_pred             cHHHHHHhhcCccccceeecCCCcceEEEEe------CCCCEEEEEEecCCCC-CChHHHHHHHhh
Q 043043           95 PYVEIKFATHNFDRKLVMGKGAFGNVYRGTL------RNSMKVAVKRGETGSG-QGLPEFQTAIIV  153 (154)
Q Consensus        95 ~~~~l~~at~~f~~~~~iG~g~~g~vy~g~l------~~g~~vaVK~l~~~~~-~~~~~f~~e~~~  153 (154)
                      ...+.....++|.....||+|+||.||++..      .++..||||.+..... .....|.+|+++
T Consensus        13 ~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~   78 (359)
T 3vhe_A           13 DASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKI   78 (359)
T ss_dssp             CHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHH
T ss_pred             CcccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHH
Confidence            3445555667788888999999999999974      2457899999964322 223568888865

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=97.30  E-value=0.0002  Score=50.62  Aligned_cols=48  Identities=29%  Similarity=0.327  Sum_probs=37.9

Q ss_pred             CccccceeecCCCcceEEEEeCCCCEEEEEEecCCCCCChHHHHHHHhh
Q 043043          105 NFDRKLVMGKGAFGNVYRGTLRNSMKVAVKRGETGSGQGLPEFQTAIIV  153 (154)
Q Consensus       105 ~f~~~~~iG~g~~g~vy~g~l~~g~~vaVK~l~~~~~~~~~~f~~e~~~  153 (154)
                      +|.....||+|+||.||++...++..||+|.+.... ....+|.+|+++
T Consensus         9 ~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~   56 (268)
T 3sxs_A            9 EITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGS-MSEDEFFQEAQT   56 (268)
T ss_dssp             GEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTT-BCHHHHHHHHHH
T ss_pred             heeeeeeeccCCCceEEEEEecCceeEEEEEeccCC-CcHHHHHHHHHH
Confidence            455567899999999999999888899999996432 235678888765

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=97.30  E-value=0.00036  Score=50.13  Aligned_cols=50  Identities=28%  Similarity=0.402  Sum_probs=37.6

Q ss_pred             cCccccceeecCCCcceEEEEeC-CCCEEEEEEecCCCCCChHHHHHHHhh
Q 043043          104 HNFDRKLVMGKGAFGNVYRGTLR-NSMKVAVKRGETGSGQGLPEFQTAIIV  153 (154)
Q Consensus       104 ~~f~~~~~iG~g~~g~vy~g~l~-~g~~vaVK~l~~~~~~~~~~f~~e~~~  153 (154)
                      ..|.....||+|+||.||++... ++..+|+|.+..........|.+|+++
T Consensus        19 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~   69 (302)
T 2j7t_A           19 EVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEI   69 (302)
T ss_dssp             GTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHH
T ss_pred             cceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHH
Confidence            44566678999999999999986 478999999976555566788888765

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=97.29  E-value=0.00013  Score=57.99  Aligned_cols=50  Identities=28%  Similarity=0.284  Sum_probs=37.7

Q ss_pred             CccccceeecCCCcceEEEEeC-CCCEEEEEEecCCCCCChHHHHHHHhhC
Q 043043          105 NFDRKLVMGKGAFGNVYRGTLR-NSMKVAVKRGETGSGQGLPEFQTAIIVL  154 (154)
Q Consensus       105 ~f~~~~~iG~g~~g~vy~g~l~-~g~~vaVK~l~~~~~~~~~~f~~e~~~l  154 (154)
                      +|...+.||+|+||.||++.-. +|..||+|.+..........+.+|+.+|
T Consensus       158 ~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il  208 (573)
T 3uto_A          158 HYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTM  208 (573)
T ss_dssp             TEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHH
T ss_pred             ccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHH
Confidence            4555678999999999999874 6889999999654333345678888754

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=97.25  E-value=7.3e-05  Score=57.42  Aligned_cols=59  Identities=24%  Similarity=0.284  Sum_probs=41.8

Q ss_pred             cHHHHHHhhcCccccceeecCCCcceEEEEeCC-CCEEEEEEecCC---CCCChHHHHHHHhh
Q 043043           95 PYVEIKFATHNFDRKLVMGKGAFGNVYRGTLRN-SMKVAVKRGETG---SGQGLPEFQTAIIV  153 (154)
Q Consensus        95 ~~~~l~~at~~f~~~~~iG~g~~g~vy~g~l~~-g~~vaVK~l~~~---~~~~~~~f~~e~~~  153 (154)
                      .+.++...+++|...++||+|+||.||++...+ +..+|+|.+...   .......|.+|..+
T Consensus        65 ~~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~i  127 (437)
T 4aw2_A           65 KVKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDV  127 (437)
T ss_dssp             HHHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHH
T ss_pred             hhhcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHH
Confidence            345555566788888999999999999999864 678999999421   12222346666654

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=97.25  E-value=9e-05  Score=53.92  Aligned_cols=35  Identities=29%  Similarity=0.557  Sum_probs=29.9

Q ss_pred             cCccccceeecCCCcceEEEEeC-CCCEEEEEEecC
Q 043043          104 HNFDRKLVMGKGAFGNVYRGTLR-NSMKVAVKRGET  138 (154)
Q Consensus       104 ~~f~~~~~iG~g~~g~vy~g~l~-~g~~vaVK~l~~  138 (154)
                      ++|...+.||+|+||+||++... ++..||||++..
T Consensus        57 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~   92 (311)
T 3p1a_A           57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMS   92 (311)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESS
T ss_pred             hheeeeheeccCCCeEEEEEEECCCCeEEEEEEecc
Confidence            34777788999999999999986 689999999854

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=97.24  E-value=0.00019  Score=52.43  Aligned_cols=48  Identities=27%  Similarity=0.376  Sum_probs=37.0

Q ss_pred             ccccceeecCCCcceEEEEe-----CCCCEEEEEEecCCCCCChHHHHHHHhh
Q 043043          106 FDRKLVMGKGAFGNVYRGTL-----RNSMKVAVKRGETGSGQGLPEFQTAIIV  153 (154)
Q Consensus       106 f~~~~~iG~g~~g~vy~g~l-----~~g~~vaVK~l~~~~~~~~~~f~~e~~~  153 (154)
                      |...+.||+|+||.||++.+     .++..||+|.+..........|.+|+++
T Consensus        43 y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~   95 (326)
T 2w1i_A           43 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEI   95 (326)
T ss_dssp             EEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHH
T ss_pred             ceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHH
Confidence            45557899999999999985     3578999999975444444678888765

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=97.23  E-value=0.00042  Score=49.44  Aligned_cols=50  Identities=32%  Similarity=0.563  Sum_probs=36.7

Q ss_pred             cCccccceeecCCCcceEEEEe-CCCCEEEEEEecCCCCCCh-------HHHHHHHhh
Q 043043          104 HNFDRKLVMGKGAFGNVYRGTL-RNSMKVAVKRGETGSGQGL-------PEFQTAIIV  153 (154)
Q Consensus       104 ~~f~~~~~iG~g~~g~vy~g~l-~~g~~vaVK~l~~~~~~~~-------~~f~~e~~~  153 (154)
                      ++|...+.||+|+||.||++.. .++..||+|.+........       ..|.+|+++
T Consensus        19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~   76 (287)
T 4f0f_A           19 NEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI   76 (287)
T ss_dssp             TTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHH
T ss_pred             ccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHH
Confidence            3456667899999999999997 4678999999954322211       567788764

>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*

Probab=97.23  E-value=0.00036  Score=50.40  Aligned_cols=34  Identities=18%  Similarity=0.066  Sum_probs=28.7

Q ss_pred             cCccccceeecCCCcceEEEEeCCCCEEEEEEec
Q 043043          104 HNFDRKLVMGKGAFGNVYRGTLRNSMKVAVKRGE  137 (154)
Q Consensus       104 ~~f~~~~~iG~g~~g~vy~g~l~~g~~vaVK~l~  137 (154)
                      ..+...+.||+|+||.||++..++|..||+|.+.
T Consensus        90 ~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~  123 (282)
T 1zar_A           90 KVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHK  123 (282)
T ss_dssp             SCSEEEEEEEECSSEEEEEEEETTTEEEEEEEEC
T ss_pred             eEEEecCEeccCCCceEEEEEeCCCCEEEEEEEE
Confidence            3344457899999999999999778999999995

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=97.22  E-value=0.00022  Score=55.41  Aligned_cols=50  Identities=30%  Similarity=0.503  Sum_probs=39.0

Q ss_pred             cCccccceeecCCCcceEEEEeCC-CCEEEEEEecCCCCCChHHHHHHHhhC
Q 043043          104 HNFDRKLVMGKGAFGNVYRGTLRN-SMKVAVKRGETGSGQGLPEFQTAIIVL  154 (154)
Q Consensus       104 ~~f~~~~~iG~g~~g~vy~g~l~~-g~~vaVK~l~~~~~~~~~~f~~e~~~l  154 (154)
                      ..|...+.||+|+||.||+|...+ +..||||.+... .....+|.+|+.+|
T Consensus       220 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l  270 (495)
T 1opk_A          220 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVM  270 (495)
T ss_dssp             GGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSS-SSCHHHHHHHHHHH
T ss_pred             HHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCc-ccchHHHHHHHHHH
Confidence            345566789999999999999865 788999999643 23467899998754

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=97.22  E-value=0.00014  Score=52.56  Aligned_cols=49  Identities=18%  Similarity=0.205  Sum_probs=32.6

Q ss_pred             CccccceeecCCCcceEEEEeCC-CCEEEEEEecCCCCCChHHHHHHHhh
Q 043043          105 NFDRKLVMGKGAFGNVYRGTLRN-SMKVAVKRGETGSGQGLPEFQTAIIV  153 (154)
Q Consensus       105 ~f~~~~~iG~g~~g~vy~g~l~~-g~~vaVK~l~~~~~~~~~~f~~e~~~  153 (154)
                      +|.....||+|+||.||++...+ +..||+|.+.........+|.+|+++
T Consensus        12 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~   61 (320)
T 2i6l_A           12 RYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKI   61 (320)
T ss_dssp             TEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHH
T ss_pred             ceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHH
Confidence            45566789999999999999864 78999999865433334667788764

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=97.22  E-value=0.00028  Score=51.36  Aligned_cols=49  Identities=22%  Similarity=0.175  Sum_probs=36.8

Q ss_pred             CccccceeecCCCcceEEEEeCC-CCEEEEEEecCCC-CCChHHHHHHHhh
Q 043043          105 NFDRKLVMGKGAFGNVYRGTLRN-SMKVAVKRGETGS-GQGLPEFQTAIIV  153 (154)
Q Consensus       105 ~f~~~~~iG~g~~g~vy~g~l~~-g~~vaVK~l~~~~-~~~~~~f~~e~~~  153 (154)
                      +|....+||+|+||.||++.... +..||+|.+.... ......+.+|+++
T Consensus        10 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~   60 (319)
T 4euu_A           10 LWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEV   60 (319)
T ss_dssp             EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHH
T ss_pred             CEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHH
Confidence            34556789999999999999864 7899999995432 3335667788765

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=97.21  E-value=0.00018  Score=50.74  Aligned_cols=49  Identities=12%  Similarity=0.198  Sum_probs=36.9

Q ss_pred             CccccceeecCCCcceEEEEeCCCCEEEEEEecCCC--CCChHHHHHHHhhC
Q 043043          105 NFDRKLVMGKGAFGNVYRGTLRNSMKVAVKRGETGS--GQGLPEFQTAIIVL  154 (154)
Q Consensus       105 ~f~~~~~iG~g~~g~vy~g~l~~g~~vaVK~l~~~~--~~~~~~f~~e~~~l  154 (154)
                      +|.....||+|+||.||++... +..+|||.+....  ......|.+|+.+|
T Consensus        11 ~y~~~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~E~~~l   61 (271)
T 3kmu_A           11 QLNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRL   61 (271)
T ss_dssp             GCEEEEEEEEETTEEEEEEEET-TEEEEEEEECCTTCCHHHHHHHHHHGGGG
T ss_pred             HhHHHHHhcCCCcceEEEEEEC-CeeEEEEEecccccCHHHHHHHHHHHHHH
Confidence            3555678999999999999985 7889999996432  22235688888753

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=97.21  E-value=0.00013  Score=53.35  Aligned_cols=49  Identities=27%  Similarity=0.336  Sum_probs=37.3

Q ss_pred             CccccceeecCCCcceEEEEe-----CCCCEEEEEEecCCCCCChHHHHHHHhh
Q 043043          105 NFDRKLVMGKGAFGNVYRGTL-----RNSMKVAVKRGETGSGQGLPEFQTAIIV  153 (154)
Q Consensus       105 ~f~~~~~iG~g~~g~vy~g~l-----~~g~~vaVK~l~~~~~~~~~~f~~e~~~  153 (154)
                      +|.....||+|+||.||++.+     .++..||||.+........+.|.+|+++
T Consensus        24 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~   77 (327)
T 3lxl_A           24 HLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQI   77 (327)
T ss_dssp             GEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHH
T ss_pred             hhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHH
Confidence            455667899999999999985     3578899999965443334568888765

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=97.21  E-value=4.3e-05  Score=55.49  Aligned_cols=53  Identities=13%  Similarity=0.151  Sum_probs=39.6

Q ss_pred             HhhcCccccceeecCCCcceEEEEeCCCCEEEEEEecCCCCC--ChHHHHHHHhh
Q 043043          101 FATHNFDRKLVMGKGAFGNVYRGTLRNSMKVAVKRGETGSGQ--GLPEFQTAIIV  153 (154)
Q Consensus       101 ~at~~f~~~~~iG~g~~g~vy~g~l~~g~~vaVK~l~~~~~~--~~~~f~~e~~~  153 (154)
                      .....|.....||+|+||.||++...++..||+|.+......  ....|.+|+++
T Consensus        25 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~   79 (313)
T 3cek_A           25 VKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAY   79 (313)
T ss_dssp             ETTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHH
T ss_pred             eccceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHH
Confidence            334556667889999999999999888899999999643222  23567777764

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=97.20  E-value=0.00044  Score=49.59  Aligned_cols=49  Identities=20%  Similarity=0.340  Sum_probs=36.5

Q ss_pred             CccccceeecCCCcceEEEEeC-CCCEEEEEEecCCC--CCChHHHHHHHhh
Q 043043          105 NFDRKLVMGKGAFGNVYRGTLR-NSMKVAVKRGETGS--GQGLPEFQTAIIV  153 (154)
Q Consensus       105 ~f~~~~~iG~g~~g~vy~g~l~-~g~~vaVK~l~~~~--~~~~~~f~~e~~~  153 (154)
                      +|...+.||+|+||.||++... ++..||+|.+....  ......+.+|+.+
T Consensus         3 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~   54 (292)
T 3o0g_A            3 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICL   54 (292)
T ss_dssp             SEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHH
T ss_pred             CceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHH
Confidence            3555678999999999999875 57899999996432  2223567788765

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=97.19  E-value=8e-05  Score=54.60  Aligned_cols=50  Identities=20%  Similarity=0.224  Sum_probs=30.4

Q ss_pred             CccccceeecCCCcceEEEEe----CCCCEEEEEEecCC--CCCChHHHHHHHhhC
Q 043043          105 NFDRKLVMGKGAFGNVYRGTL----RNSMKVAVKRGETG--SGQGLPEFQTAIIVL  154 (154)
Q Consensus       105 ~f~~~~~iG~g~~g~vy~g~l----~~g~~vaVK~l~~~--~~~~~~~f~~e~~~l  154 (154)
                      +|.....||+|+||.||++.-    ..+..||+|.+...  .......|.+|+++|
T Consensus        25 ~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il   80 (304)
T 3ubd_A           25 QFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDIL   80 (304)
T ss_dssp             GEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCC
T ss_pred             ccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHH
Confidence            355567899999999999975    23578999999532  112223577787654

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=97.19  E-value=0.00017  Score=54.10  Aligned_cols=48  Identities=25%  Similarity=0.354  Sum_probs=31.8

Q ss_pred             cccceeecCCCcceEEEEe-CCCCEEEEEEecCCCCCChHHHHHHHhhC
Q 043043          107 DRKLVMGKGAFGNVYRGTL-RNSMKVAVKRGETGSGQGLPEFQTAIIVL  154 (154)
Q Consensus       107 ~~~~~iG~g~~g~vy~g~l-~~g~~vaVK~l~~~~~~~~~~f~~e~~~l  154 (154)
                      ...++||+|+||.||++.. .+|..||+|.+.........+|.+|+++|
T Consensus        92 ~~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l  140 (373)
T 2x4f_A           92 SKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVM  140 (373)
T ss_dssp             EEEEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHH
T ss_pred             ecceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHH
Confidence            3456799999999999987 46889999999754433456788888653

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=97.18  E-value=0.00033  Score=52.05  Aligned_cols=34  Identities=26%  Similarity=0.397  Sum_probs=28.2

Q ss_pred             CccccceeecCCCcceEEEEe-CCCCEEEEEEecC
Q 043043          105 NFDRKLVMGKGAFGNVYRGTL-RNSMKVAVKRGET  138 (154)
Q Consensus       105 ~f~~~~~iG~g~~g~vy~g~l-~~g~~vaVK~l~~  138 (154)
                      .|.....||+|+||.||++.- ..|..||||.++.
T Consensus        59 ~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~   93 (336)
T 4g3f_A           59 WMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRL   93 (336)
T ss_dssp             EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEET
T ss_pred             heEeCcEeccCCCeEEEEEEECCCCCEEEEEEECH
Confidence            355556799999999999986 4588999999964

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=97.16  E-value=0.0006  Score=49.12  Aligned_cols=49  Identities=10%  Similarity=0.001  Sum_probs=36.2

Q ss_pred             CccccceeecCCCcceEEEEeCC-CCEEEEEEecCCCCCC---hHHHHHHHhh
Q 043043          105 NFDRKLVMGKGAFGNVYRGTLRN-SMKVAVKRGETGSGQG---LPEFQTAIIV  153 (154)
Q Consensus       105 ~f~~~~~iG~g~~g~vy~g~l~~-g~~vaVK~l~~~~~~~---~~~f~~e~~~  153 (154)
                      +|.....||+|+||.||++.... +..||+|.+.......   ...|.+|+.+
T Consensus        32 ~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~   84 (286)
T 3uqc_A           32 RYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLR   84 (286)
T ss_dssp             TEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHH
T ss_pred             cEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHH
Confidence            35556789999999999999854 7899999996543322   2567777654

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=97.15  E-value=9.8e-05  Score=55.30  Aligned_cols=50  Identities=26%  Similarity=0.384  Sum_probs=36.5

Q ss_pred             cCccccceeecCCCcceEEEEeC-CCCEEEEEEecCCCC-CChHHHHHHHhh
Q 043043          104 HNFDRKLVMGKGAFGNVYRGTLR-NSMKVAVKRGETGSG-QGLPEFQTAIIV  153 (154)
Q Consensus       104 ~~f~~~~~iG~g~~g~vy~g~l~-~g~~vaVK~l~~~~~-~~~~~f~~e~~~  153 (154)
                      .+|...+.||+|+||.||+|... ++..||||.+..... ....+|.+|+++
T Consensus       114 ~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~  165 (377)
T 3cbl_A          114 EDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARI  165 (377)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHH
T ss_pred             HHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHH
Confidence            34555678999999999999986 688999999864321 122457777765

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=97.14  E-value=0.00034  Score=50.21  Aligned_cols=45  Identities=24%  Similarity=0.343  Sum_probs=33.5

Q ss_pred             cCccccceeecCCCcceEEEEeCCCCEEEEEEecCCCCCChHHHHHHHh
Q 043043          104 HNFDRKLVMGKGAFGNVYRGTLRNSMKVAVKRGETGSGQGLPEFQTAII  152 (154)
Q Consensus       104 ~~f~~~~~iG~g~~g~vy~g~l~~g~~vaVK~l~~~~~~~~~~f~~e~~  152 (154)
                      ++|...+.||+|+||.||+|.. ++..||||.+...   ....+..|.+
T Consensus         8 ~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~---~~~~~~~e~~   52 (301)
T 3q4u_A            8 RDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSR---DEKSWFRETE   52 (301)
T ss_dssp             GGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHH
T ss_pred             CcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEeccc---cchhhHHHHH
Confidence            3466668899999999999998 5789999998532   2344555544

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=97.13  E-value=0.00043  Score=48.79  Aligned_cols=48  Identities=29%  Similarity=0.312  Sum_probs=37.8

Q ss_pred             CccccceeecCCCcceEEEEeCCCCEEEEEEecCCCCCChHHHHHHHhh
Q 043043          105 NFDRKLVMGKGAFGNVYRGTLRNSMKVAVKRGETGSGQGLPEFQTAIIV  153 (154)
Q Consensus       105 ~f~~~~~iG~g~~g~vy~g~l~~g~~vaVK~l~~~~~~~~~~f~~e~~~  153 (154)
                      +|...+.||+|+||.||++...++..||+|.+.... ....+|.+|+++
T Consensus         9 ~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~   56 (267)
T 3t9t_A            9 ELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEV   56 (267)
T ss_dssp             GEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTT-BCHHHHHHHHHH
T ss_pred             heeeeeEecCCCceeEEEEEecCCCeEEEEEccccC-CCHHHHHHHHHH
Confidence            355567899999999999999888899999996432 234678888765

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=97.12  E-value=0.00038  Score=50.24  Aligned_cols=49  Identities=24%  Similarity=0.255  Sum_probs=34.9

Q ss_pred             CccccceeecCCCcceEEEEeC-CCCEEEEEEecCCCCCChHHHHHHHhh
Q 043043          105 NFDRKLVMGKGAFGNVYRGTLR-NSMKVAVKRGETGSGQGLPEFQTAIIV  153 (154)
Q Consensus       105 ~f~~~~~iG~g~~g~vy~g~l~-~g~~vaVK~l~~~~~~~~~~f~~e~~~  153 (154)
                      +|.....||+|+||.||++... +|..||+|.+..........+.+|+++
T Consensus        10 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~   59 (304)
T 2jam_A           10 TFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAV   59 (304)
T ss_dssp             HEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHH
T ss_pred             cceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHH
Confidence            3556678999999999999874 688999999975443344567788764

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=97.12  E-value=0.0005  Score=50.65  Aligned_cols=49  Identities=20%  Similarity=0.335  Sum_probs=36.7

Q ss_pred             CccccceeecCCCcceEEEEe-CCCCEEEEEEecCC--CCCChHHHHHHHhh
Q 043043          105 NFDRKLVMGKGAFGNVYRGTL-RNSMKVAVKRGETG--SGQGLPEFQTAIIV  153 (154)
Q Consensus       105 ~f~~~~~iG~g~~g~vy~g~l-~~g~~vaVK~l~~~--~~~~~~~f~~e~~~  153 (154)
                      +|...+.||+|+||.||++.. .+|..||+|.+...  .......+.+|+.+
T Consensus        18 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~   69 (351)
T 3mi9_A           18 KYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKI   69 (351)
T ss_dssp             GEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHH
T ss_pred             ceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHH
Confidence            455667899999999999997 46889999998433  22234567788765

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=97.09  E-value=9.2e-05  Score=53.92  Aligned_cols=53  Identities=28%  Similarity=0.468  Sum_probs=34.1

Q ss_pred             HhhcCccccceeecCCCcceEEEEeCCC----CEEEEEEecCC--CCCChHHHHHHHhh
Q 043043          101 FATHNFDRKLVMGKGAFGNVYRGTLRNS----MKVAVKRGETG--SGQGLPEFQTAIIV  153 (154)
Q Consensus       101 ~at~~f~~~~~iG~g~~g~vy~g~l~~g----~~vaVK~l~~~--~~~~~~~f~~e~~~  153 (154)
                      ...++|...+.||+|+||.||++.....    ..||||.+...  ......+|.+|+++
T Consensus        20 i~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~   78 (323)
T 3qup_A           20 IPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAAC   78 (323)
T ss_dssp             CC---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHH
T ss_pred             cChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHH
Confidence            3445677778999999999999987543    27999999643  23334678888765

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=97.08  E-value=0.00019  Score=52.20  Aligned_cols=58  Identities=19%  Similarity=0.342  Sum_probs=42.3

Q ss_pred             cHHHHHHhhcCccccceeecCCCcceEEEEe-CCCCEEEEEEecCCCCCChHHHHHHHhh
Q 043043           95 PYVEIKFATHNFDRKLVMGKGAFGNVYRGTL-RNSMKVAVKRGETGSGQGLPEFQTAIIV  153 (154)
Q Consensus        95 ~~~~l~~at~~f~~~~~iG~g~~g~vy~g~l-~~g~~vaVK~l~~~~~~~~~~f~~e~~~  153 (154)
                      ++.++....++|.....||+|+||.||++.. .++..||+|.+.... .....+.+|+.+
T Consensus        15 ~~~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~   73 (326)
T 2x7f_A           15 DLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINM   73 (326)
T ss_dssp             -CCCCCCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS-STTHHHHHHHHH
T ss_pred             cchhccCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCc-ccHHHHHHHHHH
Confidence            3344445566777788999999999999997 467899999996432 234667777754

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=97.08  E-value=0.00038  Score=49.46  Aligned_cols=49  Identities=16%  Similarity=0.299  Sum_probs=38.6

Q ss_pred             CccccceeecCCCcceEEEEeCC-CCEEEEEEecCCCCCChHHHHHHHhh
Q 043043          105 NFDRKLVMGKGAFGNVYRGTLRN-SMKVAVKRGETGSGQGLPEFQTAIIV  153 (154)
Q Consensus       105 ~f~~~~~iG~g~~g~vy~g~l~~-g~~vaVK~l~~~~~~~~~~f~~e~~~  153 (154)
                      +|...+.||+|+||.||++...+ +..+|+|.+........+.|.+|+++
T Consensus        10 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~   59 (277)
T 3f3z_A           10 YYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEI   59 (277)
T ss_dssp             HEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHH
T ss_pred             hEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHH
Confidence            35666789999999999998754 56899999965544556788888865

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=97.07  E-value=0.0004  Score=51.52  Aligned_cols=48  Identities=25%  Similarity=0.349  Sum_probs=34.5

Q ss_pred             hcCccccceeecCCCcceEEEE------eCCCCEEEEEEecCCCCCChHHHHHHHhh
Q 043043          103 THNFDRKLVMGKGAFGNVYRGT------LRNSMKVAVKRGETGSGQGLPEFQTAIIV  153 (154)
Q Consensus       103 t~~f~~~~~iG~g~~g~vy~g~------l~~g~~vaVK~l~~~~~~~~~~f~~e~~~  153 (154)
                      ...|...+.||+|+||.||++.      ...+..||+|.+...   ...+|..|+++
T Consensus        64 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~  117 (365)
T 3e7e_A           64 SKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA---NPWEFYIGTQL  117 (365)
T ss_dssp             SSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC---CHHHHHHHHHH
T ss_pred             CEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC---ChhHHHHHHHH
Confidence            3456667889999999999994      456789999999633   34566666543

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=97.07  E-value=0.00022  Score=51.67  Aligned_cols=50  Identities=20%  Similarity=0.063  Sum_probs=36.2

Q ss_pred             cCccccceeecCCCcceEEEEe-CCCCEEEEEEecCCCCCChHHHHHHHhh
Q 043043          104 HNFDRKLVMGKGAFGNVYRGTL-RNSMKVAVKRGETGSGQGLPEFQTAIIV  153 (154)
Q Consensus       104 ~~f~~~~~iG~g~~g~vy~g~l-~~g~~vaVK~l~~~~~~~~~~f~~e~~~  153 (154)
                      ++|.....||+|+||.||++.- .++..||+|.+..........|.+|+++
T Consensus        29 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~   79 (317)
T 2buj_A           29 KHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADM   79 (317)
T ss_dssp             EEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHH
T ss_pred             eEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHH
Confidence            4566678899999999999987 5688999999864433344567788764

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=97.07  E-value=0.00051  Score=49.33  Aligned_cols=48  Identities=25%  Similarity=0.392  Sum_probs=35.2

Q ss_pred             ccccceeecCCCcceEEEEe-----CCCCEEEEEEecCC-CCCChHHHHHHHhh
Q 043043          106 FDRKLVMGKGAFGNVYRGTL-----RNSMKVAVKRGETG-SGQGLPEFQTAIIV  153 (154)
Q Consensus       106 f~~~~~iG~g~~g~vy~g~l-----~~g~~vaVK~l~~~-~~~~~~~f~~e~~~  153 (154)
                      |.....||+|+||.||++.+     .++..||+|.+... .......|.+|+++
T Consensus        23 ~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~   76 (302)
T 4e5w_A           23 LKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEI   76 (302)
T ss_dssp             EEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHH
T ss_pred             hhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHH
Confidence            45567899999999999985     35789999999643 33345678888765

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=97.06  E-value=0.00047  Score=51.91  Aligned_cols=49  Identities=22%  Similarity=0.173  Sum_probs=36.7

Q ss_pred             CccccceeecCCCcceEEEEeC-CCCEEEEEEecCCC-CCChHHHHHHHhh
Q 043043          105 NFDRKLVMGKGAFGNVYRGTLR-NSMKVAVKRGETGS-GQGLPEFQTAIIV  153 (154)
Q Consensus       105 ~f~~~~~iG~g~~g~vy~g~l~-~g~~vaVK~l~~~~-~~~~~~f~~e~~~  153 (154)
                      +|...++||+|+||.||++... ++..||+|.+.... ......+.+|+++
T Consensus        10 ~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~   60 (396)
T 4eut_A           10 LWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEV   60 (396)
T ss_dssp             EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHH
T ss_pred             ceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHH
Confidence            3455678999999999999985 47899999995432 2335667788765

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=97.04  E-value=0.0011  Score=47.91  Aligned_cols=50  Identities=18%  Similarity=0.198  Sum_probs=37.1

Q ss_pred             CccccceeecCCCcceEEEEe-CCCCEEEEEEecCCCCCC---hHHHHHHHhhC
Q 043043          105 NFDRKLVMGKGAFGNVYRGTL-RNSMKVAVKRGETGSGQG---LPEFQTAIIVL  154 (154)
Q Consensus       105 ~f~~~~~iG~g~~g~vy~g~l-~~g~~vaVK~l~~~~~~~---~~~f~~e~~~l  154 (154)
                      +|...+.||+|+||.||++.- .++..||+|.+.......   ...|.+|+.++
T Consensus        13 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l   66 (311)
T 3ork_A           13 RYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNA   66 (311)
T ss_dssp             TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTC
T ss_pred             cEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHH
Confidence            455668899999999999985 567899999996543222   24577887653

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=97.03  E-value=0.00016  Score=53.54  Aligned_cols=60  Identities=18%  Similarity=0.098  Sum_probs=40.6

Q ss_pred             cccHHHHHHhhcCccccceeecCCCcceEEEEe-CCCCEEEEEEecCCCCCChHHHHHHHhh
Q 043043           93 KIPYVEIKFATHNFDRKLVMGKGAFGNVYRGTL-RNSMKVAVKRGETGSGQGLPEFQTAIIV  153 (154)
Q Consensus        93 ~~~~~~l~~at~~f~~~~~iG~g~~g~vy~g~l-~~g~~vaVK~l~~~~~~~~~~f~~e~~~  153 (154)
                      .+++.+.....++|...+.||+|+||.||++.. .++..||||.+... ......+..|+++
T Consensus        24 ~~~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~   84 (360)
T 3llt_A           24 HFSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNI-KKYTRSAKIEADI   84 (360)
T ss_dssp             SCCCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC-HHHHHHHHHHHHH
T ss_pred             eeeeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccc-hhhhhhhHHHHHH
Confidence            344444444456788888999999999999987 46789999998532 1112345555543

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=97.02  E-value=0.00042  Score=50.99  Aligned_cols=50  Identities=20%  Similarity=0.250  Sum_probs=37.2

Q ss_pred             cCccccceeecCCCcceEEEEe-CCCCEEEEEEecCCC--CCChHHHHHHHhh
Q 043043          104 HNFDRKLVMGKGAFGNVYRGTL-RNSMKVAVKRGETGS--GQGLPEFQTAIIV  153 (154)
Q Consensus       104 ~~f~~~~~iG~g~~g~vy~g~l-~~g~~vaVK~l~~~~--~~~~~~f~~e~~~  153 (154)
                      .+|...+.||+|+||.||++.- .+|..||+|.+....  ......+.+|+++
T Consensus        15 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~   67 (328)
T 3fe3_A           15 GNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRI   67 (328)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHH
T ss_pred             CCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHH
Confidence            4566678899999999999986 578999999995432  2223457778765

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=97.02  E-value=0.00024  Score=51.68  Aligned_cols=50  Identities=16%  Similarity=0.188  Sum_probs=37.0

Q ss_pred             cCccccceeecCCCcceEEEEeC-CCCEEEEEEecCCCCCChHHHHHHHhh
Q 043043          104 HNFDRKLVMGKGAFGNVYRGTLR-NSMKVAVKRGETGSGQGLPEFQTAIIV  153 (154)
Q Consensus       104 ~~f~~~~~iG~g~~g~vy~g~l~-~g~~vaVK~l~~~~~~~~~~f~~e~~~  153 (154)
                      .+|....+||+|+||.||++... ++..||+|.+..........+.+|+.+
T Consensus        28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~   78 (337)
T 3ll6_A           28 LRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCF   78 (337)
T ss_dssp             EEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHH
T ss_pred             ceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHH
Confidence            34666688999999999999964 678999999854433334567777654

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=97.02  E-value=0.00084  Score=48.86  Aligned_cols=46  Identities=20%  Similarity=0.323  Sum_probs=36.0

Q ss_pred             CccccceeecCCCcceEEEEe-CCCCEEEEEEecCCCCCChHHHHHHHhh
Q 043043          105 NFDRKLVMGKGAFGNVYRGTL-RNSMKVAVKRGETGSGQGLPEFQTAIIV  153 (154)
Q Consensus       105 ~f~~~~~iG~g~~g~vy~g~l-~~g~~vaVK~l~~~~~~~~~~f~~e~~~  153 (154)
                      +|...+.||+|+||.||++.- .++..||+|.+..   .....+.+|+++
T Consensus        37 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~---~~~~~~~~E~~~   83 (330)
T 3nsz_A           37 DYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKP---VKKKKIKREIKI   83 (330)
T ss_dssp             GEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECS---CCHHHHHHHHHH
T ss_pred             ceEEEEEecccCCeEEEEEEECCCCcEEEEEEecc---cchHHHHHHHHH
Confidence            455667899999999999985 5678999999963   235678888765

>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...

Probab=97.01  E-value=0.00076  Score=48.35  Aligned_cols=49  Identities=22%  Similarity=0.331  Sum_probs=34.9

Q ss_pred             CccccceeecCCCcceEEEEeC-CCCEEEEEEecCC--CCCChHHHHHHHhh
Q 043043          105 NFDRKLVMGKGAFGNVYRGTLR-NSMKVAVKRGETG--SGQGLPEFQTAIIV  153 (154)
Q Consensus       105 ~f~~~~~iG~g~~g~vy~g~l~-~g~~vaVK~l~~~--~~~~~~~f~~e~~~  153 (154)
                      +|...+.||+|+||.||++... ++..||+|.+...  .......+.+|+++
T Consensus         4 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~   55 (299)
T 2r3i_A            4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISL   55 (299)
T ss_dssp             TEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHH
T ss_pred             hhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHH
Confidence            4666678999999999999875 6789999998533  22234667788764

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=97.01  E-value=0.00011  Score=53.47  Aligned_cols=55  Identities=25%  Similarity=0.434  Sum_probs=39.0

Q ss_pred             HHhhcCccccceeecCCCcceEEEEeC------CCCEEEEEEecCCCC-CChHHHHHHHhhC
Q 043043          100 KFATHNFDRKLVMGKGAFGNVYRGTLR------NSMKVAVKRGETGSG-QGLPEFQTAIIVL  154 (154)
Q Consensus       100 ~~at~~f~~~~~iG~g~~g~vy~g~l~------~g~~vaVK~l~~~~~-~~~~~f~~e~~~l  154 (154)
                      ....++|...+.||+|+||.||+|...      .+..||+|.+..... .....|.+|+.+|
T Consensus        21 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l   82 (322)
T 1p4o_A           21 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM   82 (322)
T ss_dssp             BCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHG
T ss_pred             cchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHH
Confidence            334456777788999999999999764      357899999964322 2234688887653

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=97.01  E-value=0.00069  Score=49.31  Aligned_cols=49  Identities=22%  Similarity=0.346  Sum_probs=26.7

Q ss_pred             CccccceeecCCCcceEEEEeC-CCCEEEEEEecCCC-CCChHHHHHHHhh
Q 043043          105 NFDRKLVMGKGAFGNVYRGTLR-NSMKVAVKRGETGS-GQGLPEFQTAIIV  153 (154)
Q Consensus       105 ~f~~~~~iG~g~~g~vy~g~l~-~g~~vaVK~l~~~~-~~~~~~f~~e~~~  153 (154)
                      +|...+.||+|+||.||++... ++..||+|.+.... ......+.+|+++
T Consensus         6 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~   56 (317)
T 2pmi_A            6 QFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISL   56 (317)
T ss_dssp             -------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHH
T ss_pred             ceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHH
Confidence            4556678999999999999874 57899999996432 2334678888765

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=97.01  E-value=0.00055  Score=49.59  Aligned_cols=46  Identities=28%  Similarity=0.437  Sum_probs=35.5

Q ss_pred             CccccceeecCCCcceEEEEeCCCCEEEEEEecCCCCCChHHHHHHHhh
Q 043043          105 NFDRKLVMGKGAFGNVYRGTLRNSMKVAVKRGETGSGQGLPEFQTAIIV  153 (154)
Q Consensus       105 ~f~~~~~iG~g~~g~vy~g~l~~g~~vaVK~l~~~~~~~~~~f~~e~~~  153 (154)
                      +|...+.||+|+||.||++... +..||+|.+...  .....|.+|+.+
T Consensus         9 ~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~--~~~~~~~~E~~~   54 (307)
T 2eva_A            9 EIEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIESE--SERKAFIVELRQ   54 (307)
T ss_dssp             GEEEEEEEECCSSSEEEEEEET-TEEEEEEECSST--THHHHHHHHHHH
T ss_pred             HeeeeeEeecCCCceEEEEEEC-CeeEEEEEecCh--hHHHHHHHHHHH
Confidence            3455678999999999999985 688999998532  234678888765

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=97.01  E-value=0.00021  Score=52.32  Aligned_cols=54  Identities=24%  Similarity=0.372  Sum_probs=39.2

Q ss_pred             HHhhcCccccceeecCCCcceEEEEeCC------CCEEEEEEecCCCC-CChHHHHHHHhh
Q 043043          100 KFATHNFDRKLVMGKGAFGNVYRGTLRN------SMKVAVKRGETGSG-QGLPEFQTAIIV  153 (154)
Q Consensus       100 ~~at~~f~~~~~iG~g~~g~vy~g~l~~------g~~vaVK~l~~~~~-~~~~~f~~e~~~  153 (154)
                      ....++|...+.||+|+||.||++...+      +..||+|.+..... .....|.+|+.+
T Consensus        43 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~  103 (343)
T 1luf_A           43 EYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAAL  103 (343)
T ss_dssp             BCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHH
T ss_pred             EecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHH
Confidence            3345667777889999999999999743      37899999964322 223568888765

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=97.00  E-value=0.00052  Score=50.85  Aligned_cols=50  Identities=28%  Similarity=0.367  Sum_probs=37.2

Q ss_pred             cCccccceeecCCCcceEEEEe-CCCCEEEEEEecCCCCCC---hHHHHHHHhh
Q 043043          104 HNFDRKLVMGKGAFGNVYRGTL-RNSMKVAVKRGETGSGQG---LPEFQTAIIV  153 (154)
Q Consensus       104 ~~f~~~~~iG~g~~g~vy~g~l-~~g~~vaVK~l~~~~~~~---~~~f~~e~~~  153 (154)
                      ..|...+.||+|+||.||++.- .++..||||.+.......   ..+|.+|+++
T Consensus        54 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~  107 (348)
T 1u5q_A           54 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRF  107 (348)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHH
T ss_pred             hheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHH
Confidence            3466678899999999999986 578899999996433222   2457788765

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=97.00  E-value=0.00062  Score=48.92  Aligned_cols=35  Identities=23%  Similarity=0.260  Sum_probs=26.7

Q ss_pred             cCccccceeecCCCcceEEEEeC-CCCEEEEEEecC
Q 043043          104 HNFDRKLVMGKGAFGNVYRGTLR-NSMKVAVKRGET  138 (154)
Q Consensus       104 ~~f~~~~~iG~g~~g~vy~g~l~-~g~~vaVK~l~~  138 (154)
                      ++|...+.||+|+||.||++.-. ++..||+|.+..
T Consensus        13 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~   48 (298)
T 2zv2_A           13 NQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSK   48 (298)
T ss_dssp             TTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEEC
T ss_pred             cceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeeh
Confidence            34666688999999999999864 578899999953

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=97.00  E-value=0.00067  Score=54.15  Aligned_cols=44  Identities=27%  Similarity=0.469  Sum_probs=34.5

Q ss_pred             eeecCCCcceEEEEeC---CCCEEEEEEecCC-CCCChHHHHHHHhhC
Q 043043          111 VMGKGAFGNVYRGTLR---NSMKVAVKRGETG-SGQGLPEFQTAIIVL  154 (154)
Q Consensus       111 ~iG~g~~g~vy~g~l~---~g~~vaVK~l~~~-~~~~~~~f~~e~~~l  154 (154)
                      .||+|+||.||+|...   ++..||||.+... ......+|.+|+++|
T Consensus       343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il  390 (613)
T 2ozo_A          343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIM  390 (613)
T ss_dssp             EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHH
T ss_pred             EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHH
Confidence            6999999999999874   4567999999654 333567899998764

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=96.99  E-value=0.00025  Score=52.96  Aligned_cols=51  Identities=20%  Similarity=0.341  Sum_probs=35.7

Q ss_pred             cCccccceeecCCCcceEEEEeC--------CCCEEEEEEecCCCC-CChHHHHHHHhhC
Q 043043          104 HNFDRKLVMGKGAFGNVYRGTLR--------NSMKVAVKRGETGSG-QGLPEFQTAIIVL  154 (154)
Q Consensus       104 ~~f~~~~~iG~g~~g~vy~g~l~--------~g~~vaVK~l~~~~~-~~~~~f~~e~~~l  154 (154)
                      .+|...+.||+|+||.||++...        ++..||||.+..... ....+|.+|+++|
T Consensus        81 ~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l  140 (370)
T 2psq_A           81 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM  140 (370)
T ss_dssp             GGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHH
T ss_pred             HHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHH
Confidence            34555678999999999999862        345799999964322 2235688887653

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=96.99  E-value=0.00055  Score=50.09  Aligned_cols=49  Identities=24%  Similarity=0.321  Sum_probs=34.3

Q ss_pred             CccccceeecCCCcceEEEEeC-CCCEEEEEEecCCC-CCChHHHHHHHhh
Q 043043          105 NFDRKLVMGKGAFGNVYRGTLR-NSMKVAVKRGETGS-GQGLPEFQTAIIV  153 (154)
Q Consensus       105 ~f~~~~~iG~g~~g~vy~g~l~-~g~~vaVK~l~~~~-~~~~~~f~~e~~~  153 (154)
                      +|...+.||+|+||.||++... ++..||+|.+.... ......+.+|+.+
T Consensus         8 ~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~   58 (323)
T 3tki_A            8 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICI   58 (323)
T ss_dssp             CEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHH
T ss_pred             hceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHH
Confidence            4566688999999999999875 67899999996432 2223457777654

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=96.98  E-value=0.00031  Score=52.38  Aligned_cols=50  Identities=32%  Similarity=0.468  Sum_probs=35.9

Q ss_pred             cCccccceeecCCCcceEEEEeC------CCCEEEEEEecCC-CCCChHHHHHHHhh
Q 043043          104 HNFDRKLVMGKGAFGNVYRGTLR------NSMKVAVKRGETG-SGQGLPEFQTAIIV  153 (154)
Q Consensus       104 ~~f~~~~~iG~g~~g~vy~g~l~------~g~~vaVK~l~~~-~~~~~~~f~~e~~~  153 (154)
                      .+|.....||+|+||.||++...      ++..||||.+... ......+|.+|+.+
T Consensus        71 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~  127 (367)
T 3l9p_A           71 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALI  127 (367)
T ss_dssp             GGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHH
T ss_pred             hHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHH
Confidence            34566678999999999999963      3568999999533 22233467788764

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=96.97  E-value=0.00043  Score=50.39  Aligned_cols=48  Identities=25%  Similarity=0.313  Sum_probs=35.2

Q ss_pred             ccccceeecCCCcceEEEEeC-----CCCEEEEEEecCCCC-CChHHHHHHHhh
Q 043043          106 FDRKLVMGKGAFGNVYRGTLR-----NSMKVAVKRGETGSG-QGLPEFQTAIIV  153 (154)
Q Consensus       106 f~~~~~iG~g~~g~vy~g~l~-----~g~~vaVK~l~~~~~-~~~~~f~~e~~~  153 (154)
                      |.....||+|+||.||++.+.     ++..||||.+..... .....|.+|+++
T Consensus        33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~   86 (318)
T 3lxp_A           33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDI   86 (318)
T ss_dssp             EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHH
T ss_pred             HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHH
Confidence            345578999999999999763     578899999964322 223568888765

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=96.97  E-value=0.00082  Score=48.07  Aligned_cols=48  Identities=27%  Similarity=0.330  Sum_probs=37.2

Q ss_pred             ccccceeecCCCcceEEEEeC-CCCEEEEEEecCC-CCCChHHHHHHHhh
Q 043043          106 FDRKLVMGKGAFGNVYRGTLR-NSMKVAVKRGETG-SGQGLPEFQTAIIV  153 (154)
Q Consensus       106 f~~~~~iG~g~~g~vy~g~l~-~g~~vaVK~l~~~-~~~~~~~f~~e~~~  153 (154)
                      |...+.||+|+||.||++... ++..+|+|.+... .......+.+|+++
T Consensus        24 y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~   73 (285)
T 3is5_A           24 FIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEV   73 (285)
T ss_dssp             EEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHH
T ss_pred             eeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHH
Confidence            555688999999999999874 5789999999543 33345778888865

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=96.95  E-value=0.00031  Score=50.73  Aligned_cols=58  Identities=21%  Similarity=0.315  Sum_probs=40.3

Q ss_pred             HHHHHHhhcCccccceeecCCCcceEEEEe------CCCCEEEEEEecCCCCC-ChHHHHHHHhh
Q 043043           96 YVEIKFATHNFDRKLVMGKGAFGNVYRGTL------RNSMKVAVKRGETGSGQ-GLPEFQTAIIV  153 (154)
Q Consensus        96 ~~~l~~at~~f~~~~~iG~g~~g~vy~g~l------~~g~~vaVK~l~~~~~~-~~~~f~~e~~~  153 (154)
                      ........++|...+.||+|+||.||++..      .++..||+|.+...... ....|.+|+.+
T Consensus        19 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~   83 (316)
T 2xir_A           19 ASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKI   83 (316)
T ss_dssp             HHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHH
T ss_pred             ccceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHH
Confidence            334444456677778999999999999984      34578999999643221 23467777764

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=96.94  E-value=0.0014  Score=48.71  Aligned_cols=37  Identities=32%  Similarity=0.354  Sum_probs=30.8

Q ss_pred             hcCccccceeecCCCcceEEEEeC-CCCEEEEEEecCC
Q 043043          103 THNFDRKLVMGKGAFGNVYRGTLR-NSMKVAVKRGETG  139 (154)
Q Consensus       103 t~~f~~~~~iG~g~~g~vy~g~l~-~g~~vaVK~l~~~  139 (154)
                      ..+|...+.||+|+||.||++... +|..||||.+...
T Consensus        93 ~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~  130 (365)
T 2y7j_A           93 YQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVT  130 (365)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETT
T ss_pred             hhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEcc
Confidence            345666788999999999999985 6899999998643

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=96.94  E-value=0.00047  Score=50.34  Aligned_cols=48  Identities=21%  Similarity=0.157  Sum_probs=34.2

Q ss_pred             cCccccceeecCCCcceEEEEeCCCCEEEEEEecCCCCCChHHHHHHHhh
Q 043043          104 HNFDRKLVMGKGAFGNVYRGTLRNSMKVAVKRGETGSGQGLPEFQTAIIV  153 (154)
Q Consensus       104 ~~f~~~~~iG~g~~g~vy~g~l~~g~~vaVK~l~~~~~~~~~~f~~e~~~  153 (154)
                      .+|....+||+|+||.||++... +..||||.+.... .....+..|+.+
T Consensus        24 ~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~-~~~~~~~~E~~~   71 (322)
T 3soc_A           24 MPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQD-KQSWQNEYEVYS   71 (322)
T ss_dssp             EEEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGGG-HHHHHHHHHHHT
T ss_pred             hhchhhheecccCceEEEEEEEC-CCEEEEEEeecCc-hHHHHHHHHHHH
Confidence            44666688999999999999986 6899999995321 122345556644

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=96.93  E-value=0.0016  Score=46.89  Aligned_cols=49  Identities=31%  Similarity=0.483  Sum_probs=37.5

Q ss_pred             CccccceeecCCCcceEEEEe-CCCCEEEEEEecCCC-CCChHHHHHHHhh
Q 043043          105 NFDRKLVMGKGAFGNVYRGTL-RNSMKVAVKRGETGS-GQGLPEFQTAIIV  153 (154)
Q Consensus       105 ~f~~~~~iG~g~~g~vy~g~l-~~g~~vaVK~l~~~~-~~~~~~f~~e~~~  153 (154)
                      .|...+.||+|+||.||++.. .++..||+|.+.... ......|.+|+.+
T Consensus        23 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~   73 (303)
T 3a7i_A           23 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITV   73 (303)
T ss_dssp             TEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHH
T ss_pred             HHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHH
Confidence            456667899999999999986 467899999996443 3345678888764

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=96.92  E-value=0.00071  Score=47.81  Aligned_cols=49  Identities=24%  Similarity=0.397  Sum_probs=34.3

Q ss_pred             cCccccceeecCCCcceEEEEeCCCCEEEEEEecCCC----CCChHHHHHHHhh
Q 043043          104 HNFDRKLVMGKGAFGNVYRGTLRNSMKVAVKRGETGS----GQGLPEFQTAIIV  153 (154)
Q Consensus       104 ~~f~~~~~iG~g~~g~vy~g~l~~g~~vaVK~l~~~~----~~~~~~f~~e~~~  153 (154)
                      .+|.....||+|+||.||++... +..+|||.+....    ......|.+|+++
T Consensus         7 ~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~   59 (271)
T 3dtc_A            7 AELTLEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKL   59 (271)
T ss_dssp             TSEEEEEEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHH
T ss_pred             hheeeeeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHH
Confidence            34566688999999999999975 7899999985322    2224567777764

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=96.92  E-value=0.0008  Score=48.84  Aligned_cols=50  Identities=18%  Similarity=0.256  Sum_probs=35.7

Q ss_pred             hcCccccceeecCCCcceEEEEe--CCCCEEEEEEecCC--CCCChHHHHHHHh
Q 043043          103 THNFDRKLVMGKGAFGNVYRGTL--RNSMKVAVKRGETG--SGQGLPEFQTAII  152 (154)
Q Consensus       103 t~~f~~~~~iG~g~~g~vy~g~l--~~g~~vaVK~l~~~--~~~~~~~f~~e~~  152 (154)
                      .++|.....||+|+||.||++..  .++..||+|.+...  .......+.+|+.
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~   63 (326)
T 1blx_A           10 DQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVA   63 (326)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHH
T ss_pred             hhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHH
Confidence            35567778899999999999987  46788999998532  2222345656654

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=96.91  E-value=0.00032  Score=53.36  Aligned_cols=57  Identities=18%  Similarity=0.209  Sum_probs=39.8

Q ss_pred             HHHHHhhcCccccceeecCCCcceEEEEeC-CCCEEEEEEecC---CCCCChHHHHHHHhh
Q 043043           97 VEIKFATHNFDRKLVMGKGAFGNVYRGTLR-NSMKVAVKRGET---GSGQGLPEFQTAIIV  153 (154)
Q Consensus        97 ~~l~~at~~f~~~~~iG~g~~g~vy~g~l~-~g~~vaVK~l~~---~~~~~~~~f~~e~~~  153 (154)
                      .++.....+|...++||+|+||.||++... ++..+|+|.+..   ........+.+|+.+
T Consensus        62 ~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~i  122 (410)
T 3v8s_A           62 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDI  122 (410)
T ss_dssp             HHHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHH
T ss_pred             HhcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHH
Confidence            344445567778889999999999999985 478999999842   112223446666654

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=96.90  E-value=0.00066  Score=49.77  Aligned_cols=51  Identities=27%  Similarity=0.365  Sum_probs=35.9

Q ss_pred             hcCccccceeecCCCcceEEEEe------CCCCEEEEEEecCC-CCCChHHHHHHHhh
Q 043043          103 THNFDRKLVMGKGAFGNVYRGTL------RNSMKVAVKRGETG-SGQGLPEFQTAIIV  153 (154)
Q Consensus       103 t~~f~~~~~iG~g~~g~vy~g~l------~~g~~vaVK~l~~~-~~~~~~~f~~e~~~  153 (154)
                      ..+|...+.||+|+||.||++..      .++..||+|.+... .......|.+|+.+
T Consensus        44 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~  101 (344)
T 1rjb_A           44 RENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKM  101 (344)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHH
T ss_pred             HHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHH
Confidence            35566678899999999999986      23468999999643 23334678888765

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=96.89  E-value=0.00049  Score=50.39  Aligned_cols=50  Identities=22%  Similarity=0.342  Sum_probs=35.0

Q ss_pred             cCccccceeecCCCcceEEEEeC--------CCCEEEEEEecCCCC-CChHHHHHHHhh
Q 043043          104 HNFDRKLVMGKGAFGNVYRGTLR--------NSMKVAVKRGETGSG-QGLPEFQTAIIV  153 (154)
Q Consensus       104 ~~f~~~~~iG~g~~g~vy~g~l~--------~g~~vaVK~l~~~~~-~~~~~f~~e~~~  153 (154)
                      ++|.....||+|+||.||++...        ++..||+|.+..... .....|.+|+++
T Consensus        35 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~   93 (334)
T 2pvf_A           35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEM   93 (334)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHH
T ss_pred             hHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHH
Confidence            44566678999999999999863        467899999964322 223567777764

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=96.89  E-value=0.0012  Score=47.62  Aligned_cols=49  Identities=18%  Similarity=0.251  Sum_probs=35.4

Q ss_pred             CccccceeecCCCcceEEEEeC-CCCEEEEEEecCCCCC--ChHHHHHHHhh
Q 043043          105 NFDRKLVMGKGAFGNVYRGTLR-NSMKVAVKRGETGSGQ--GLPEFQTAIIV  153 (154)
Q Consensus       105 ~f~~~~~iG~g~~g~vy~g~l~-~g~~vaVK~l~~~~~~--~~~~f~~e~~~  153 (154)
                      +|...+.||+|+||.||++... +|..||+|.+......  ....+.+|+++
T Consensus         4 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~   55 (311)
T 4agu_A            4 KYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRM   55 (311)
T ss_dssp             CEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHH
T ss_pred             cceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHH
Confidence            4556678999999999999985 4789999998543222  13456777754

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=96.89  E-value=0.00019  Score=54.70  Aligned_cols=43  Identities=23%  Similarity=0.369  Sum_probs=34.8

Q ss_pred             cHHHHHHhhcCccccceeecCCCcceEEEEeC-CCCEEEEEEec
Q 043043           95 PYVEIKFATHNFDRKLVMGKGAFGNVYRGTLR-NSMKVAVKRGE  137 (154)
Q Consensus        95 ~~~~l~~at~~f~~~~~iG~g~~g~vy~g~l~-~g~~vaVK~l~  137 (154)
                      .+.++....++|...++||+|+||.||++... +|..||+|.+.
T Consensus        52 ~~~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~   95 (412)
T 2vd5_A           52 RLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMN   95 (412)
T ss_dssp             HHHHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEE
T ss_pred             hhhhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEe
Confidence            34444555677888889999999999999985 68899999994

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=96.88  E-value=0.00091  Score=47.50  Aligned_cols=47  Identities=32%  Similarity=0.422  Sum_probs=35.5

Q ss_pred             cCccccceeecCCCcceEEEEeCCCCEEEEEEecCCCCCChHHHHHHHhh
Q 043043          104 HNFDRKLVMGKGAFGNVYRGTLRNSMKVAVKRGETGSGQGLPEFQTAIIV  153 (154)
Q Consensus       104 ~~f~~~~~iG~g~~g~vy~g~l~~g~~vaVK~l~~~~~~~~~~f~~e~~~  153 (154)
                      ++|.....||+|+||.||++... |..||+|.+....  ..+.|.+|+++
T Consensus        21 ~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~   67 (278)
T 1byg_A           21 KELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASV   67 (278)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEET-TEEEEEEECCCCC----HHHHHTHHH
T ss_pred             hhceEEeEEecCCCceEEEEEEc-CCEEEEEEecchh--HHHHHHHHHHH
Confidence            34566678999999999999885 7899999986432  34678888764

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=96.88  E-value=0.00045  Score=52.89  Aligned_cols=51  Identities=18%  Similarity=0.260  Sum_probs=29.1

Q ss_pred             cCccccceeecCCCcceEEEEeC-CCCEEEEEEecCCC--CCChHHHHHHHhhC
Q 043043          104 HNFDRKLVMGKGAFGNVYRGTLR-NSMKVAVKRGETGS--GQGLPEFQTAIIVL  154 (154)
Q Consensus       104 ~~f~~~~~iG~g~~g~vy~g~l~-~g~~vaVK~l~~~~--~~~~~~f~~e~~~l  154 (154)
                      .+|...++||+|+||.||++.-. ++..||||++....  ......|.+|+++|
T Consensus        53 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l  106 (458)
T 3rp9_A           53 DRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAIL  106 (458)
T ss_dssp             TTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHH
T ss_pred             CCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHH
Confidence            45666788999999999999864 67899999995322  11235678888653

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=96.86  E-value=0.00071  Score=49.55  Aligned_cols=50  Identities=18%  Similarity=0.269  Sum_probs=31.6

Q ss_pred             cCccccceeecCCCcceEEEEe----CCCCEEEEEEecCCC----CCChHHHHHHHhh
Q 043043          104 HNFDRKLVMGKGAFGNVYRGTL----RNSMKVAVKRGETGS----GQGLPEFQTAIIV  153 (154)
Q Consensus       104 ~~f~~~~~iG~g~~g~vy~g~l----~~g~~vaVK~l~~~~----~~~~~~f~~e~~~  153 (154)
                      .+|...+.||+|+||.||++..    .++..+|+|.+....    ......+.+|+++
T Consensus        17 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~   74 (327)
T 3a62_A           17 ECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNI   74 (327)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHH
T ss_pred             HHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHH
Confidence            3466668899999999999987    468899999995321    1223446666654

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=96.86  E-value=0.00025  Score=50.64  Aligned_cols=50  Identities=30%  Similarity=0.483  Sum_probs=37.9

Q ss_pred             hcCccccceeecCCCcceEEEEeCC-CCEEEEEEecCCCCCChHHHHHHHhh
Q 043043          103 THNFDRKLVMGKGAFGNVYRGTLRN-SMKVAVKRGETGSGQGLPEFQTAIIV  153 (154)
Q Consensus       103 t~~f~~~~~iG~g~~g~vy~g~l~~-g~~vaVK~l~~~~~~~~~~f~~e~~~  153 (154)
                      ..+|...+.||+|+||.||++...+ +..||+|.+... .....+|.+|+++
T Consensus        12 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~   62 (288)
T 3kfa_A           12 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAV   62 (288)
T ss_dssp             GGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSC-STHHHHHHHHHHH
T ss_pred             ccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcC-HHHHHHHHHHHHH
Confidence            3456666889999999999999864 678999999643 2234678888765

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=96.86  E-value=0.00046  Score=50.65  Aligned_cols=33  Identities=15%  Similarity=0.240  Sum_probs=28.8

Q ss_pred             cCccccceeecCCCcceEEEEeCCCCEEEEEEec
Q 043043          104 HNFDRKLVMGKGAFGNVYRGTLRNSMKVAVKRGE  137 (154)
Q Consensus       104 ~~f~~~~~iG~g~~g~vy~g~l~~g~~vaVK~l~  137 (154)
                      ++|.....||+|+||.||++.. ++..||+|.+.
T Consensus        31 ~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~   63 (348)
T 2pml_X           31 NDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYE   63 (348)
T ss_dssp             TTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEE
T ss_pred             CceEEEEEEcCCCCeEEEEEEc-CCceEEEEEee
Confidence            4566667899999999999998 88999999994

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=96.86  E-value=0.00062  Score=49.84  Aligned_cols=51  Identities=22%  Similarity=0.307  Sum_probs=34.8

Q ss_pred             cCccccceeecCCCcceEEEEe-CCCCEEEEEEecCCC--CCChHHHHHHHhhC
Q 043043          104 HNFDRKLVMGKGAFGNVYRGTL-RNSMKVAVKRGETGS--GQGLPEFQTAIIVL  154 (154)
Q Consensus       104 ~~f~~~~~iG~g~~g~vy~g~l-~~g~~vaVK~l~~~~--~~~~~~f~~e~~~l  154 (154)
                      ++|.....||+|+||.||++.- .++..||+|.+....  ......+.+|+.+|
T Consensus        34 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l   87 (329)
T 3gbz_A           34 DRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLL   87 (329)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHG
T ss_pred             hhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHH
Confidence            4566678899999999999985 467899999995332  22234566777653

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=96.84  E-value=0.0013  Score=48.17  Aligned_cols=49  Identities=16%  Similarity=0.257  Sum_probs=36.7

Q ss_pred             ccccceeecCCCcceEEEEeC-CCCEEEEEEecCCCC------CChHHHHHHHhhC
Q 043043          106 FDRKLVMGKGAFGNVYRGTLR-NSMKVAVKRGETGSG------QGLPEFQTAIIVL  154 (154)
Q Consensus       106 f~~~~~iG~g~~g~vy~g~l~-~g~~vaVK~l~~~~~------~~~~~f~~e~~~l  154 (154)
                      |.....||+|+||.||++... +|..||+|.+.....      .....|.+|+++|
T Consensus        13 y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l   68 (326)
T 2y0a_A           13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSIL   68 (326)
T ss_dssp             EEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHH
T ss_pred             eEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHH
Confidence            556678999999999999875 578999999953321      1346788888653

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=96.84  E-value=0.00078  Score=49.21  Aligned_cols=48  Identities=25%  Similarity=0.291  Sum_probs=34.8

Q ss_pred             cCccccceeecCCCcceEEEEe-CCCCEEEEEEecCCCCCChHHHHHHHhh
Q 043043          104 HNFDRKLVMGKGAFGNVYRGTL-RNSMKVAVKRGETGSGQGLPEFQTAIIV  153 (154)
Q Consensus       104 ~~f~~~~~iG~g~~g~vy~g~l-~~g~~vaVK~l~~~~~~~~~~f~~e~~~  153 (154)
                      .+|...+.||+|+||.||++.- .++..||||.+.....  ...|..|+++
T Consensus         9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~E~~~   57 (330)
T 2izr_A            9 PNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR--APQLHLEYRF   57 (330)
T ss_dssp             TTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS--SCCHHHHHHH
T ss_pred             CCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccc--hHHHHHHHHH
Confidence            3566678899999999999985 5678999999864322  2356677654

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=96.84  E-value=0.00034  Score=49.94  Aligned_cols=49  Identities=18%  Similarity=0.300  Sum_probs=36.3

Q ss_pred             CccccceeecCCCcceEEEEeCC-C-------CEEEEEEecCCCCCChHHHHHHHhh
Q 043043          105 NFDRKLVMGKGAFGNVYRGTLRN-S-------MKVAVKRGETGSGQGLPEFQTAIIV  153 (154)
Q Consensus       105 ~f~~~~~iG~g~~g~vy~g~l~~-g-------~~vaVK~l~~~~~~~~~~f~~e~~~  153 (154)
                      +|.....||+|+||.||++...+ +       ..||+|.+..........|.+|+++
T Consensus         9 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~   65 (289)
T 4fvq_A            9 DLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASM   65 (289)
T ss_dssp             GEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHH
T ss_pred             HeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHH
Confidence            35556789999999999998643 2       4699999965444445678888765

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=96.84  E-value=0.0013  Score=46.71  Aligned_cols=48  Identities=15%  Similarity=0.162  Sum_probs=36.2

Q ss_pred             ccccceeecCCCcceEEEEeC-CCCEEEEEEecCCCC------CChHHHHHHHhh
Q 043043          106 FDRKLVMGKGAFGNVYRGTLR-NSMKVAVKRGETGSG------QGLPEFQTAIIV  153 (154)
Q Consensus       106 f~~~~~iG~g~~g~vy~g~l~-~g~~vaVK~l~~~~~------~~~~~f~~e~~~  153 (154)
                      |.....||+|+||.||++... ++..+|+|.+.....      .....|.+|+.+
T Consensus         7 y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~   61 (283)
T 3bhy_A            7 YEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNI   61 (283)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHH
T ss_pred             hhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHH
Confidence            555678999999999999986 578999999853211      135678888765

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=96.83  E-value=0.0013  Score=48.99  Aligned_cols=50  Identities=18%  Similarity=0.234  Sum_probs=37.1

Q ss_pred             CccccceeecCCCcceEEEEeC-CCCEEEEEEecCCCCC------ChHHHHHHHhhC
Q 043043          105 NFDRKLVMGKGAFGNVYRGTLR-NSMKVAVKRGETGSGQ------GLPEFQTAIIVL  154 (154)
Q Consensus       105 ~f~~~~~iG~g~~g~vy~g~l~-~g~~vaVK~l~~~~~~------~~~~f~~e~~~l  154 (154)
                      .|.....||+|+||.||++.-. +|..+|+|.+......      ....+.+|+.+|
T Consensus        13 ~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il   69 (361)
T 2yab_A           13 FYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSIL   69 (361)
T ss_dssp             TEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHH
T ss_pred             ceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHH
Confidence            4555678999999999999875 5789999999543211      246788888653

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=96.83  E-value=0.0005  Score=51.46  Aligned_cols=50  Identities=24%  Similarity=0.309  Sum_probs=35.5

Q ss_pred             cCccccceeecCCCcceEEEEeC--------CCCEEEEEEecCCCC-CChHHHHHHHhh
Q 043043          104 HNFDRKLVMGKGAFGNVYRGTLR--------NSMKVAVKRGETGSG-QGLPEFQTAIIV  153 (154)
Q Consensus       104 ~~f~~~~~iG~g~~g~vy~g~l~--------~g~~vaVK~l~~~~~-~~~~~f~~e~~~  153 (154)
                      ++|...+.||+|+||.||++...        .+..||||.+..... ....+|.+|+++
T Consensus        69 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~  127 (382)
T 3tt0_A           69 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEM  127 (382)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHH
T ss_pred             hheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHH
Confidence            44566678999999999999852        235799999964322 223567788765

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=96.83  E-value=0.00064  Score=51.23  Aligned_cols=51  Identities=22%  Similarity=0.187  Sum_probs=37.8

Q ss_pred             cCccccceeecCCCcceEEEEeC-CCCEEEEEEecCCCCCChHHHHHHHhhC
Q 043043          104 HNFDRKLVMGKGAFGNVYRGTLR-NSMKVAVKRGETGSGQGLPEFQTAIIVL  154 (154)
Q Consensus       104 ~~f~~~~~iG~g~~g~vy~g~l~-~g~~vaVK~l~~~~~~~~~~f~~e~~~l  154 (154)
                      ..|...+.||+|+||.||++... ++..+|+|.+..........+.+|+++|
T Consensus        51 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il  102 (387)
T 1kob_A           51 DYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIM  102 (387)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHH
T ss_pred             cceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHH
Confidence            34666678999999999999875 5788999998644332345677887653

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=96.82  E-value=0.001  Score=50.09  Aligned_cols=44  Identities=23%  Similarity=0.334  Sum_probs=28.3

Q ss_pred             cceeecCCCcceEEEEeC---CCCEEEEEEecCCCCCChHHHHHHHhhC
Q 043043          109 KLVMGKGAFGNVYRGTLR---NSMKVAVKRGETGSGQGLPEFQTAIIVL  154 (154)
Q Consensus       109 ~~~iG~g~~g~vy~g~l~---~g~~vaVK~l~~~~~~~~~~f~~e~~~l  154 (154)
                      .++||+|+||.||++...   ++..||+|.+....  ....+.+|+++|
T Consensus        26 g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~E~~~l   72 (405)
T 3rgf_A           26 GCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTG--ISMSACREIALL   72 (405)
T ss_dssp             SCCCC-----EEEEEEESSSSCCCCEEEEECSSSS--CCHHHHHHHHHH
T ss_pred             CcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCC--CCHHHHHHHHHH
Confidence            357999999999999975   46789999996432  235677887653

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=96.82  E-value=0.00052  Score=49.48  Aligned_cols=50  Identities=26%  Similarity=0.336  Sum_probs=36.5

Q ss_pred             cCccccceeecCCCcceEEEEe------CCCCEEEEEEecCCCC-CChHHHHHHHhh
Q 043043          104 HNFDRKLVMGKGAFGNVYRGTL------RNSMKVAVKRGETGSG-QGLPEFQTAIIV  153 (154)
Q Consensus       104 ~~f~~~~~iG~g~~g~vy~g~l------~~g~~vaVK~l~~~~~-~~~~~f~~e~~~  153 (154)
                      ++|...+.||+|+||.||++..      .++..||+|.+..... .....|.+|+.+
T Consensus        23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~   79 (313)
T 1t46_A           23 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKV   79 (313)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHH
T ss_pred             hhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHH
Confidence            4566668899999999999985      3457899999964322 223567788764

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=96.82  E-value=0.00057  Score=49.99  Aligned_cols=49  Identities=33%  Similarity=0.481  Sum_probs=32.2

Q ss_pred             CccccceeecCCCcceEEEEeC-CCC----EEEEEEecCC-CCCChHHHHHHHhh
Q 043043          105 NFDRKLVMGKGAFGNVYRGTLR-NSM----KVAVKRGETG-SGQGLPEFQTAIIV  153 (154)
Q Consensus       105 ~f~~~~~iG~g~~g~vy~g~l~-~g~----~vaVK~l~~~-~~~~~~~f~~e~~~  153 (154)
                      +|...+.||+|+||.||+|... ++.    .||+|.+... ......+|.+|+.+
T Consensus        16 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~   70 (327)
T 3poz_A           16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV   70 (327)
T ss_dssp             GEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHH
T ss_pred             HcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHH
Confidence            4666688999999999999863 333    4689988533 33455778888865

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=96.82  E-value=0.00082  Score=49.75  Aligned_cols=49  Identities=24%  Similarity=0.238  Sum_probs=31.3

Q ss_pred             hcCccccceeecCCCcceEEEEeC-CCCEEEEEEecCCCCCChHHHHHHHhh
Q 043043          103 THNFDRKLVMGKGAFGNVYRGTLR-NSMKVAVKRGETGSGQGLPEFQTAIIV  153 (154)
Q Consensus       103 t~~f~~~~~iG~g~~g~vy~g~l~-~g~~vaVK~l~~~~~~~~~~f~~e~~~  153 (154)
                      .+.|.....||+|+||.||++... ++..||+|.+....  ..+.|.+|+++
T Consensus        52 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~  101 (349)
T 2w4o_A           52 SDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV--DKKIVRTEIGV  101 (349)
T ss_dssp             GGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC------------CHH
T ss_pred             cCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch--hHHHHHHHHHH
Confidence            345666788999999999999986 46789999996432  23456666654

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=96.81  E-value=0.00067  Score=49.70  Aligned_cols=51  Identities=16%  Similarity=0.251  Sum_probs=37.5

Q ss_pred             hcCccccceeecCCCcceEEEEeC-CCCEEEEEEecCC-----CCCChHHHHHHHhh
Q 043043          103 THNFDRKLVMGKGAFGNVYRGTLR-NSMKVAVKRGETG-----SGQGLPEFQTAIIV  153 (154)
Q Consensus       103 t~~f~~~~~iG~g~~g~vy~g~l~-~g~~vaVK~l~~~-----~~~~~~~f~~e~~~  153 (154)
                      .++|.....||+|+||.||++... ++..||+|.+...     .......|.+|+++
T Consensus        25 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~   81 (345)
T 3hko_A           25 QKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRL   81 (345)
T ss_dssp             HHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHH
T ss_pred             hhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHH
Confidence            345777789999999999999874 5678999998421     23334678888765

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=96.81  E-value=0.00076  Score=47.85  Aligned_cols=45  Identities=20%  Similarity=0.459  Sum_probs=34.8

Q ss_pred             CccccceeecCCCcceEEEEeC-CCCEEEEEEecCCCCCChHHHHHHHhh
Q 043043          105 NFDRKLVMGKGAFGNVYRGTLR-NSMKVAVKRGETGSGQGLPEFQTAIIV  153 (154)
Q Consensus       105 ~f~~~~~iG~g~~g~vy~g~l~-~g~~vaVK~l~~~~~~~~~~f~~e~~~  153 (154)
                      +|...+.||+|+||.||++... ++..||+|.+....    ..+.+|+++
T Consensus        12 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~e~~~   57 (284)
T 2a19_B           12 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKA   57 (284)
T ss_dssp             HEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS----GGGHHHHHH
T ss_pred             ccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc----HHHHHHHHH
Confidence            4667788999999999999985 68999999996432    345666654

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=96.81  E-value=0.00089  Score=50.13  Aligned_cols=48  Identities=33%  Similarity=0.483  Sum_probs=34.4

Q ss_pred             cccceeecCCCcceEEEEeC--CC--CEEEEEEecCCC-CCChHHHHHHHhhC
Q 043043          107 DRKLVMGKGAFGNVYRGTLR--NS--MKVAVKRGETGS-GQGLPEFQTAIIVL  154 (154)
Q Consensus       107 ~~~~~iG~g~~g~vy~g~l~--~g--~~vaVK~l~~~~-~~~~~~f~~e~~~l  154 (154)
                      ...+.||+|+||.||+|...  ++  ..||||.+.... .....+|.+|+.+|
T Consensus        92 ~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il  144 (373)
T 3c1x_A           92 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIM  144 (373)
T ss_dssp             EEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTS
T ss_pred             ecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHH
Confidence            33467999999999999873  22  368999986432 22346788898764

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=96.80  E-value=0.00072  Score=49.67  Aligned_cols=50  Identities=26%  Similarity=0.284  Sum_probs=36.6

Q ss_pred             cCccccceeecCCCcceEEEEeC-CCCEEEEEEecCCCC-CChHHHHHHHhh
Q 043043          104 HNFDRKLVMGKGAFGNVYRGTLR-NSMKVAVKRGETGSG-QGLPEFQTAIIV  153 (154)
Q Consensus       104 ~~f~~~~~iG~g~~g~vy~g~l~-~g~~vaVK~l~~~~~-~~~~~f~~e~~~  153 (154)
                      .+|...+.||+|+||.||++... +|..||||.+..... .....+.+|+++
T Consensus        11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~   62 (353)
T 2b9h_A           11 SDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKI   62 (353)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHH
T ss_pred             cceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHH
Confidence            45666788999999999999875 578999999954322 123456777764

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=96.79  E-value=0.00086  Score=49.55  Aligned_cols=50  Identities=24%  Similarity=0.260  Sum_probs=36.9

Q ss_pred             cCccccceeecCCCcceEEEEeC-CCCEEEEEEecCC---CCCChHHHHHHHhh
Q 043043          104 HNFDRKLVMGKGAFGNVYRGTLR-NSMKVAVKRGETG---SGQGLPEFQTAIIV  153 (154)
Q Consensus       104 ~~f~~~~~iG~g~~g~vy~g~l~-~g~~vaVK~l~~~---~~~~~~~f~~e~~~  153 (154)
                      ++|...+.||+|+||.||++.-. +|..||+|.+...   .......+.+|+.+
T Consensus         5 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~   58 (337)
T 1o6l_A            5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRV   58 (337)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHH
T ss_pred             HHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHH
Confidence            34666788999999999999875 5789999999532   23344567777654

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=96.78  E-value=0.00061  Score=48.79  Aligned_cols=48  Identities=31%  Similarity=0.474  Sum_probs=34.8

Q ss_pred             cCccccceeecCCCcceEEEEeCCCCEEEEEEecCCCC--CChHHHHHHHhh
Q 043043          104 HNFDRKLVMGKGAFGNVYRGTLRNSMKVAVKRGETGSG--QGLPEFQTAIIV  153 (154)
Q Consensus       104 ~~f~~~~~iG~g~~g~vy~g~l~~g~~vaVK~l~~~~~--~~~~~f~~e~~~  153 (154)
                      ++|.....||+|+||.||++...+  .+|+|.+.....  .....|.+|+++
T Consensus        24 ~~y~~~~~lG~G~~g~Vy~~~~~~--~vavK~~~~~~~~~~~~~~~~~E~~~   73 (289)
T 3og7_A           24 GQITVGQRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGV   73 (289)
T ss_dssp             TSCEEEEEEEECSSEEEEEEESSS--EEEEEEESCSSCCHHHHHHHHHHHHH
T ss_pred             cceeeeeEecCCCCeEEEEEEEcC--ceEEEEEeccCCCHHHHHHHHHHHHH
Confidence            345566789999999999998753  599999964322  223568888765

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=96.78  E-value=0.0019  Score=46.57  Aligned_cols=49  Identities=24%  Similarity=0.347  Sum_probs=34.5

Q ss_pred             CccccceeecCCCcceEEEEe-CCCCEEEEEEecCCCCC---ChHHHHHHHhh
Q 043043          105 NFDRKLVMGKGAFGNVYRGTL-RNSMKVAVKRGETGSGQ---GLPEFQTAIIV  153 (154)
Q Consensus       105 ~f~~~~~iG~g~~g~vy~g~l-~~g~~vaVK~l~~~~~~---~~~~f~~e~~~  153 (154)
                      +|...+.||+|+||.||++.. .+|..||+|.+......   ...+|.+|+.+
T Consensus        33 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~   85 (310)
T 2wqm_A           33 NFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDL   85 (310)
T ss_dssp             GEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHH
T ss_pred             ceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHH
Confidence            466668899999999999986 46889999999643222   23467777764

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=96.77  E-value=0.0021  Score=46.38  Aligned_cols=51  Identities=22%  Similarity=0.292  Sum_probs=35.3

Q ss_pred             hcCccccceeecCCCcceEEEEe-CCCCEEEEEEecCCC-----CCChHHHHHHHhh
Q 043043          103 THNFDRKLVMGKGAFGNVYRGTL-RNSMKVAVKRGETGS-----GQGLPEFQTAIIV  153 (154)
Q Consensus       103 t~~f~~~~~iG~g~~g~vy~g~l-~~g~~vaVK~l~~~~-----~~~~~~f~~e~~~  153 (154)
                      +++|.....||+|+||.||++.- .++..||+|.+....     ......+.+|+++
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~   64 (308)
T 3g33_A            8 TSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVAL   64 (308)
T ss_dssp             --CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHH
T ss_pred             ccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHH
Confidence            35677778899999999999985 467899999985221     1123456666543

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=96.77  E-value=0.00093  Score=47.72  Aligned_cols=44  Identities=27%  Similarity=0.481  Sum_probs=32.9

Q ss_pred             ceeecCCCcceEEEEeC---CCCEEEEEEecCCCC-CChHHHHHHHhh
Q 043043          110 LVMGKGAFGNVYRGTLR---NSMKVAVKRGETGSG-QGLPEFQTAIIV  153 (154)
Q Consensus       110 ~~iG~g~~g~vy~g~l~---~g~~vaVK~l~~~~~-~~~~~f~~e~~~  153 (154)
                      ..||+|+||.||++...   ++..||+|.+..... ....+|.+|+++
T Consensus        16 ~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~   63 (287)
T 1u59_A           16 IELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQI   63 (287)
T ss_dssp             EEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHH
T ss_pred             ccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHH
Confidence            37999999999999864   567899999965322 234567788765

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=96.76  E-value=0.0012  Score=47.22  Aligned_cols=50  Identities=20%  Similarity=0.335  Sum_probs=38.4

Q ss_pred             cCccccceeecCCCcceEEEEeC-CCCEEEEEEecCC--CCCChHHHHHHHhh
Q 043043          104 HNFDRKLVMGKGAFGNVYRGTLR-NSMKVAVKRGETG--SGQGLPEFQTAIIV  153 (154)
Q Consensus       104 ~~f~~~~~iG~g~~g~vy~g~l~-~g~~vaVK~l~~~--~~~~~~~f~~e~~~  153 (154)
                      ++|.....||+|+||.||++... ++..||+|.+...  .......|.+|+++
T Consensus        22 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~   74 (287)
T 2wei_A           22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVEL   74 (287)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHH
T ss_pred             hcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHH
Confidence            34666788999999999999875 6789999998532  33445678888765

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=96.76  E-value=0.00096  Score=53.52  Aligned_cols=45  Identities=27%  Similarity=0.279  Sum_probs=33.6

Q ss_pred             ceeecCCCcceEEEEeC---CCCEEEEEEecCCC--CCChHHHHHHHhhC
Q 043043          110 LVMGKGAFGNVYRGTLR---NSMKVAVKRGETGS--GQGLPEFQTAIIVL  154 (154)
Q Consensus       110 ~~iG~g~~g~vy~g~l~---~g~~vaVK~l~~~~--~~~~~~f~~e~~~l  154 (154)
                      +.||+|+||.||+|.+.   .+..||||.+....  .....+|.+|+++|
T Consensus       375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il  424 (635)
T 4fl3_A          375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVM  424 (635)
T ss_dssp             EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHH
T ss_pred             CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHH
Confidence            46999999999999763   35689999996432  22346788888753

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=96.75  E-value=0.0011  Score=49.08  Aligned_cols=50  Identities=22%  Similarity=0.245  Sum_probs=36.9

Q ss_pred             cCccccceeecCCCcceEEEEeC-CCCEEEEEEecCCCCC-ChHHHHHHHhh
Q 043043          104 HNFDRKLVMGKGAFGNVYRGTLR-NSMKVAVKRGETGSGQ-GLPEFQTAIIV  153 (154)
Q Consensus       104 ~~f~~~~~iG~g~~g~vy~g~l~-~g~~vaVK~l~~~~~~-~~~~f~~e~~~  153 (154)
                      .+|.....||+|+||.||++.-. ++..||+|.+...... ....|.+|+++
T Consensus        27 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~   78 (364)
T 3qyz_A           27 PRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKI   78 (364)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             ccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHH
Confidence            45666788999999999999864 6788999999643222 22567788765

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=96.74  E-value=0.0012  Score=48.80  Aligned_cols=50  Identities=18%  Similarity=0.206  Sum_probs=37.3

Q ss_pred             CccccceeecCCCcceEEEEeC-CCCEEEEEEecCCCC-CChHHHHHHHhhC
Q 043043          105 NFDRKLVMGKGAFGNVYRGTLR-NSMKVAVKRGETGSG-QGLPEFQTAIIVL  154 (154)
Q Consensus       105 ~f~~~~~iG~g~~g~vy~g~l~-~g~~vaVK~l~~~~~-~~~~~f~~e~~~l  154 (154)
                      +|.....||+|+||.||++... ++..||+|.+..... .....|.+|+.+|
T Consensus        34 ~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l   85 (360)
T 3eqc_A           34 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVL   85 (360)
T ss_dssp             GEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGG
T ss_pred             cceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHH
Confidence            4556678999999999999885 578999999964322 2235688887653

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=96.74  E-value=0.0023  Score=47.60  Aligned_cols=48  Identities=29%  Similarity=0.229  Sum_probs=36.2

Q ss_pred             CccccceeecCCCcceEEEEeC-CCCEEEEEEecCCCCCChHHHHHHHhh
Q 043043          105 NFDRKLVMGKGAFGNVYRGTLR-NSMKVAVKRGETGSGQGLPEFQTAIIV  153 (154)
Q Consensus       105 ~f~~~~~iG~g~~g~vy~g~l~-~g~~vaVK~l~~~~~~~~~~f~~e~~~  153 (154)
                      +|...+.||+|+||.||++.-. ++..||+|.+..... ....+.+|+.+
T Consensus        21 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~   69 (361)
T 3uc3_A           21 RYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAA-IDENVQREIIN   69 (361)
T ss_dssp             TEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTT-SCHHHHHHHHH
T ss_pred             cEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCcc-ccHHHHHHHHH
Confidence            4555678999999999999875 678999999964322 23567777754

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=96.73  E-value=0.0011  Score=48.85  Aligned_cols=50  Identities=20%  Similarity=0.325  Sum_probs=33.0

Q ss_pred             cCccccceeecCCCcceEEEEeC-CCCEEEEEEecCCCCC-----ChHHHHHHHhh
Q 043043          104 HNFDRKLVMGKGAFGNVYRGTLR-NSMKVAVKRGETGSGQ-----GLPEFQTAIIV  153 (154)
Q Consensus       104 ~~f~~~~~iG~g~~g~vy~g~l~-~g~~vaVK~l~~~~~~-----~~~~f~~e~~~  153 (154)
                      .+|.....||+|+||.||++... +|..||+|.+......     ....+.+|+++
T Consensus        10 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~   65 (346)
T 1ua2_A           10 KRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKL   65 (346)
T ss_dssp             ---CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHH
T ss_pred             cccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHH
Confidence            45667788999999999999975 5789999999532111     12457777764

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=96.72  E-value=0.0012  Score=46.60  Aligned_cols=49  Identities=24%  Similarity=0.321  Sum_probs=36.6

Q ss_pred             CccccceeecCCCcceEEEEeC-CCCEEEEEEecCCC-CCChHHHHHHHhh
Q 043043          105 NFDRKLVMGKGAFGNVYRGTLR-NSMKVAVKRGETGS-GQGLPEFQTAIIV  153 (154)
Q Consensus       105 ~f~~~~~iG~g~~g~vy~g~l~-~g~~vaVK~l~~~~-~~~~~~f~~e~~~  153 (154)
                      +|.....||+|+||.||++... ++..||+|.+.... ......+.+|+.+
T Consensus         8 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~   58 (276)
T 2yex_A            8 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICI   58 (276)
T ss_dssp             HEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHH
T ss_pred             ceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHH
Confidence            3556678999999999999875 67899999996432 2234567777754

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=96.72  E-value=0.00069  Score=48.85  Aligned_cols=50  Identities=26%  Similarity=0.334  Sum_probs=35.7

Q ss_pred             cCccccceeecCCCcceEEEEe------CCCCEEEEEEecCCC-CCChHHHHHHHhh
Q 043043          104 HNFDRKLVMGKGAFGNVYRGTL------RNSMKVAVKRGETGS-GQGLPEFQTAIIV  153 (154)
Q Consensus       104 ~~f~~~~~iG~g~~g~vy~g~l------~~g~~vaVK~l~~~~-~~~~~~f~~e~~~  153 (154)
                      .+|.....||+|+||.||++..      .++..||+|.+.... ......|.+|+++
T Consensus        23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~   79 (314)
T 2ivs_A           23 KNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNV   79 (314)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHH
T ss_pred             hheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHH
Confidence            4455667899999999999986      245789999996432 2223567778765

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=96.71  E-value=0.0018  Score=46.21  Aligned_cols=48  Identities=23%  Similarity=0.410  Sum_probs=36.3

Q ss_pred             cCccccceeecCCCcceEEEEe-CCCCEEEEEEecCCCCCChHHHHHHHhh
Q 043043          104 HNFDRKLVMGKGAFGNVYRGTL-RNSMKVAVKRGETGSGQGLPEFQTAIIV  153 (154)
Q Consensus       104 ~~f~~~~~iG~g~~g~vy~g~l-~~g~~vaVK~l~~~~~~~~~~f~~e~~~  153 (154)
                      ++|.....||+|+||.||++.- .++..||+|.+.....  ..++.+|+.+
T Consensus         9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~   57 (296)
T 3uzp_A            9 NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKI   57 (296)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSS--CCHHHHHHHH
T ss_pred             cEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcc--hhHHHHHHHH
Confidence            4566678899999999999986 5788999999864332  2357777654

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=96.71  E-value=0.00092  Score=47.54  Aligned_cols=50  Identities=26%  Similarity=0.349  Sum_probs=36.2

Q ss_pred             cCccccceeecCCCcceEEEEeC-CCCEEEEEEecCCCC--CChHHHHHHHhh
Q 043043          104 HNFDRKLVMGKGAFGNVYRGTLR-NSMKVAVKRGETGSG--QGLPEFQTAIIV  153 (154)
Q Consensus       104 ~~f~~~~~iG~g~~g~vy~g~l~-~g~~vaVK~l~~~~~--~~~~~f~~e~~~  153 (154)
                      ++|...+.||+|+||.||++... ++..||+|.+.....  .....+.+|+.+
T Consensus         6 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~   58 (284)
T 3kk8_A            6 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARI   58 (284)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHH
T ss_pred             hhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHH
Confidence            34666678999999999999874 578999999954322  223456777754

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=96.71  E-value=0.0017  Score=47.19  Aligned_cols=48  Identities=17%  Similarity=0.254  Sum_probs=36.2

Q ss_pred             ccccceeecCCCcceEEEEeC-CCCEEEEEEecCCCCC------ChHHHHHHHhh
Q 043043          106 FDRKLVMGKGAFGNVYRGTLR-NSMKVAVKRGETGSGQ------GLPEFQTAIIV  153 (154)
Q Consensus       106 f~~~~~iG~g~~g~vy~g~l~-~g~~vaVK~l~~~~~~------~~~~f~~e~~~  153 (154)
                      |...+.||+|+||.||++... +|..||+|.+......      ...+|.+|+.+
T Consensus        14 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~   68 (321)
T 2a2a_A           14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSI   68 (321)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHH
T ss_pred             EEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHH
Confidence            555678999999999999875 5789999999543211      34678888765

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=96.71  E-value=0.00073  Score=50.30  Aligned_cols=49  Identities=16%  Similarity=0.098  Sum_probs=35.6

Q ss_pred             cCccccceeecCCCcceEEEEe-CCCCEEEEEEecCCCCCChHHHHHHHhh
Q 043043          104 HNFDRKLVMGKGAFGNVYRGTL-RNSMKVAVKRGETGSGQGLPEFQTAIIV  153 (154)
Q Consensus       104 ~~f~~~~~iG~g~~g~vy~g~l-~~g~~vaVK~l~~~~~~~~~~f~~e~~~  153 (154)
                      ++|...+.||+|+||.||++.- .++..||+|.+... ......+.+|+.+
T Consensus        37 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~   86 (397)
T 1wak_A           37 GRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA-EHYTETALDEIRL   86 (397)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHH
T ss_pred             CeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC-CcchHHHHHHHHH
Confidence            4466678899999999999985 45789999999532 1123456777654

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=96.71  E-value=0.00054  Score=52.05  Aligned_cols=33  Identities=33%  Similarity=0.568  Sum_probs=28.2

Q ss_pred             ccccceeecCCCcceEEEEeC-CCCEEEEEEecC
Q 043043          106 FDRKLVMGKGAFGNVYRGTLR-NSMKVAVKRGET  138 (154)
Q Consensus       106 f~~~~~iG~g~~g~vy~g~l~-~g~~vaVK~l~~  138 (154)
                      |...++||+|+||.||++... +|..||||++..
T Consensus        56 y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~   89 (420)
T 1j1b_A           56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ   89 (420)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC
T ss_pred             EEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecc
Confidence            556678999999999999985 588999999954

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=96.70  E-value=0.0019  Score=47.49  Aligned_cols=41  Identities=27%  Similarity=0.436  Sum_probs=24.1

Q ss_pred             HHHHhhcCccccceeecCCCcceEEEEeC-CCCEEEEEEecC
Q 043043           98 EIKFATHNFDRKLVMGKGAFGNVYRGTLR-NSMKVAVKRGET  138 (154)
Q Consensus        98 ~l~~at~~f~~~~~iG~g~~g~vy~g~l~-~g~~vaVK~l~~  138 (154)
                      ......++|...+.||+|+||.||++... ++..||||++..
T Consensus        17 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~   58 (360)
T 3e3p_A           17 RSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQ   58 (360)
T ss_dssp             HHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEEC
T ss_pred             hchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEec
Confidence            44455677888899999999999999984 578999999854

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=96.70  E-value=0.0015  Score=50.74  Aligned_cols=48  Identities=25%  Similarity=0.468  Sum_probs=35.3

Q ss_pred             cCccccceeecCCCcceEEEEe-CCCCEEEEEEecCCCCCChHHHHHHHhh
Q 043043          104 HNFDRKLVMGKGAFGNVYRGTL-RNSMKVAVKRGETGSGQGLPEFQTAIIV  153 (154)
Q Consensus       104 ~~f~~~~~iG~g~~g~vy~g~l-~~g~~vaVK~l~~~~~~~~~~f~~e~~~  153 (154)
                      ++|...+.||+|+||.||++.. .++..||||.+......  .++..|+++
T Consensus         7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~--~~~~~E~~i   55 (483)
T 3sv0_A            7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH--PQLLYESKI   55 (483)
T ss_dssp             TTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCSS--CCHHHHHHH
T ss_pred             CcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEecccccc--HHHHHHHHH
Confidence            4566778899999999999986 56889999988643322  346666543

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=96.70  E-value=0.00088  Score=47.48  Aligned_cols=49  Identities=20%  Similarity=0.335  Sum_probs=36.2

Q ss_pred             cCccccceeecCCCcceEEEEeC-CCCEEEEEEecCCCC--CChHHHHHHHh
Q 043043          104 HNFDRKLVMGKGAFGNVYRGTLR-NSMKVAVKRGETGSG--QGLPEFQTAII  152 (154)
Q Consensus       104 ~~f~~~~~iG~g~~g~vy~g~l~-~g~~vaVK~l~~~~~--~~~~~f~~e~~  152 (154)
                      .+|.....||+|+||.||++... ++..||+|.+.....  ....++.+|+.
T Consensus        11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~   62 (289)
T 1x8b_A           11 TEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVY   62 (289)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHH
T ss_pred             chhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHH
Confidence            34666788999999999999985 688999999964322  22345666664

>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A

Probab=96.70  E-value=0.00037  Score=34.71  Aligned_cols=29  Identities=14%  Similarity=0.004  Sum_probs=16.8

Q ss_pred             cceeEEEehhHHHHHHHHHHHHHHHHHHH
Q 043043           19 KHFMAVVGSVLACSVLICILEIVLSFVLI   47 (154)
Q Consensus        19 ~~~~~ii~~~v~~~vll~i~~~~~~~~~~   47 (154)
                      .....|+++++++++.+++++.+.+++.|
T Consensus         8 ls~GaIAGiVvG~v~gv~li~~l~~~~~r   36 (38)
T 2k1k_A            8 LTGGEIVAVIFGLLLGAALLLGILVFRSR   36 (38)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred             CCCCceeeeehHHHHHHHHHHHHHHHHee
Confidence            34556677777776655555544444433

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=96.68  E-value=0.0013  Score=50.01  Aligned_cols=51  Identities=22%  Similarity=0.234  Sum_probs=35.6

Q ss_pred             hcCccccceeecCCCcceEEEEeC-CCCEEEEEEecCCC--------CCChHHHHHHHhh
Q 043043          103 THNFDRKLVMGKGAFGNVYRGTLR-NSMKVAVKRGETGS--------GQGLPEFQTAIIV  153 (154)
Q Consensus       103 t~~f~~~~~iG~g~~g~vy~g~l~-~g~~vaVK~l~~~~--------~~~~~~f~~e~~~  153 (154)
                      .++|...+.||+|+||.||++... ++..||+|.+....        ......|.+|+++
T Consensus       134 ~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~  193 (419)
T 3i6u_A          134 RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEI  193 (419)
T ss_dssp             HTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHH
T ss_pred             hccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHH
Confidence            355677788999999999999874 56899999985321        1112347778765

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=96.68  E-value=0.0018  Score=47.25  Aligned_cols=33  Identities=36%  Similarity=0.628  Sum_probs=28.0

Q ss_pred             cCccccceeecCCCcceEEEEeCCCCEEEEEEec
Q 043043          104 HNFDRKLVMGKGAFGNVYRGTLRNSMKVAVKRGE  137 (154)
Q Consensus       104 ~~f~~~~~iG~g~~g~vy~g~l~~g~~vaVK~l~  137 (154)
                      ++|.....||+|+||.||++.. ++..||||.+.
T Consensus        13 ~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~   45 (336)
T 3g2f_A           13 DNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFS   45 (336)
T ss_dssp             TSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEE
T ss_pred             HHhheeeecccCCCeEEEEEEE-CCeEEEEEEee
Confidence            3456667899999999999987 57899999985

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=96.67  E-value=0.00083  Score=50.08  Aligned_cols=50  Identities=20%  Similarity=0.173  Sum_probs=30.4

Q ss_pred             cCccccceeecCCCcceEEEEe-CCCCEEEEEEecCCCCC--ChHHHHHHHhh
Q 043043          104 HNFDRKLVMGKGAFGNVYRGTL-RNSMKVAVKRGETGSGQ--GLPEFQTAIIV  153 (154)
Q Consensus       104 ~~f~~~~~iG~g~~g~vy~g~l-~~g~~vaVK~l~~~~~~--~~~~f~~e~~~  153 (154)
                      ..|.....||+|+||.||++.- .+|..||+|++......  ....+.+|+++
T Consensus        25 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~   77 (367)
T 1cm8_A           25 AVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRL   77 (367)
T ss_dssp             SSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHH
T ss_pred             ceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHH
Confidence            3466667899999999999987 46889999999533211  23457777764

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=96.67  E-value=0.00085  Score=48.90  Aligned_cols=50  Identities=32%  Similarity=0.464  Sum_probs=33.4

Q ss_pred             cCccccceeecCCCcceEEEEe------CCCCEEEEEEecCC-CCCChHHHHHHHhh
Q 043043          104 HNFDRKLVMGKGAFGNVYRGTL------RNSMKVAVKRGETG-SGQGLPEFQTAIIV  153 (154)
Q Consensus       104 ~~f~~~~~iG~g~~g~vy~g~l------~~g~~vaVK~l~~~-~~~~~~~f~~e~~~  153 (154)
                      .+|.....||+|+||.||++..      .++..||||.+... ......+|.+|+.+
T Consensus        30 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~   86 (327)
T 2yfx_A           30 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALI   86 (327)
T ss_dssp             GGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHH
T ss_pred             hheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHH
Confidence            4566678899999999999985      24678999999533 22234567777754

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=96.66  E-value=0.00063  Score=50.79  Aligned_cols=50  Identities=18%  Similarity=0.237  Sum_probs=32.5

Q ss_pred             cCccccceeecCCCcceEEEEe-CCCCEEEEEEecCCCC--CChHHHHHHHhh
Q 043043          104 HNFDRKLVMGKGAFGNVYRGTL-RNSMKVAVKRGETGSG--QGLPEFQTAIIV  153 (154)
Q Consensus       104 ~~f~~~~~iG~g~~g~vy~g~l-~~g~~vaVK~l~~~~~--~~~~~f~~e~~~  153 (154)
                      .+|.....||+|+||.||++.- .+|..||+|++.....  .....+.+|+.+
T Consensus        29 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~   81 (367)
T 2fst_X           29 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL   81 (367)
T ss_dssp             TTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHH
T ss_pred             CceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHH
Confidence            4566678899999999999985 4678999999954221  123467777764

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=96.66  E-value=0.00091  Score=48.87  Aligned_cols=49  Identities=16%  Similarity=0.215  Sum_probs=35.2

Q ss_pred             CccccceeecCCCcceEEEEeC-CCCEEEEEEecCCCCC--ChHHHHHHHhh
Q 043043          105 NFDRKLVMGKGAFGNVYRGTLR-NSMKVAVKRGETGSGQ--GLPEFQTAIIV  153 (154)
Q Consensus       105 ~f~~~~~iG~g~~g~vy~g~l~-~g~~vaVK~l~~~~~~--~~~~f~~e~~~  153 (154)
                      +|.....||+|+||.||++... ++..||+|.+......  ....+.+|+.+
T Consensus        26 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~   77 (331)
T 4aaa_A           26 KYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKL   77 (331)
T ss_dssp             GEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHH
T ss_pred             hheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHH
Confidence            3555678999999999999985 4789999998543222  12446677754

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=96.66  E-value=0.0019  Score=46.61  Aligned_cols=48  Identities=29%  Similarity=0.472  Sum_probs=32.9

Q ss_pred             cCccccceeecCCCcceEEEEeC-CCCEEEEEEecCCCCCChHHHHHHHhh
Q 043043          104 HNFDRKLVMGKGAFGNVYRGTLR-NSMKVAVKRGETGSGQGLPEFQTAIIV  153 (154)
Q Consensus       104 ~~f~~~~~iG~g~~g~vy~g~l~-~g~~vaVK~l~~~~~~~~~~f~~e~~~  153 (154)
                      ..|...+.||+|+||.||++... +|..||+|.+....  ...++.+|+.+
T Consensus        29 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~e~~~   77 (314)
T 3com_A           29 EVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISI   77 (314)
T ss_dssp             -CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS--CCHHHHHHHHH
T ss_pred             hhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH--HHHHHHHHHHH
Confidence            45666788999999999999885 47899999996432  34567888764

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=96.66  E-value=0.0012  Score=46.75  Aligned_cols=50  Identities=12%  Similarity=0.233  Sum_probs=36.7

Q ss_pred             cCccccceeecCCCcceEEEEeC-CCCEEEEEEecCCCCC--ChHHHHHHHhh
Q 043043          104 HNFDRKLVMGKGAFGNVYRGTLR-NSMKVAVKRGETGSGQ--GLPEFQTAIIV  153 (154)
Q Consensus       104 ~~f~~~~~iG~g~~g~vy~g~l~-~g~~vaVK~l~~~~~~--~~~~f~~e~~~  153 (154)
                      ++|.....||+|+||.||++... ++..||+|.+......  ....|.+|+++
T Consensus         6 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~   58 (279)
T 2w5a_A            6 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNL   58 (279)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHH
T ss_pred             hheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHH
Confidence            34556678999999999999875 6789999999643222  23457777764

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=96.65  E-value=0.00087  Score=51.08  Aligned_cols=51  Identities=24%  Similarity=0.352  Sum_probs=37.3

Q ss_pred             cCccccceeecCCCcceEEEEeC-CCCEEEEEEecCCCC--CChHHHHHHHhhC
Q 043043          104 HNFDRKLVMGKGAFGNVYRGTLR-NSMKVAVKRGETGSG--QGLPEFQTAIIVL  154 (154)
Q Consensus       104 ~~f~~~~~iG~g~~g~vy~g~l~-~g~~vaVK~l~~~~~--~~~~~f~~e~~~l  154 (154)
                      ++|.....||+|+||.||++.-. ++..||||++.....  .....+.+|+.+|
T Consensus        26 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l   79 (432)
T 3n9x_A           26 DNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITIL   79 (432)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHH
T ss_pred             CCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHH
Confidence            45666788999999999999874 568899999964322  1235677887653

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=96.64  E-value=0.002  Score=47.97  Aligned_cols=50  Identities=18%  Similarity=0.233  Sum_probs=36.3

Q ss_pred             cCccccceeecCCCcceEEEEeC-CCCEEEEEEecCCCCC--ChHHHHHHHhh
Q 043043          104 HNFDRKLVMGKGAFGNVYRGTLR-NSMKVAVKRGETGSGQ--GLPEFQTAIIV  153 (154)
Q Consensus       104 ~~f~~~~~iG~g~~g~vy~g~l~-~g~~vaVK~l~~~~~~--~~~~f~~e~~~  153 (154)
                      ++|...+.||+|+||.||++.-. +|..||+|.+......  ....+.+|+.+
T Consensus        42 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~   94 (371)
T 4exu_A           42 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLL   94 (371)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHH
T ss_pred             ccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHH
Confidence            45666678999999999999864 5789999999643222  13467777754

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=96.63  E-value=0.0014  Score=46.85  Aligned_cols=46  Identities=26%  Similarity=0.463  Sum_probs=33.6

Q ss_pred             CccccceeecCCCcceEEEEe-CCCCEEEEEEecCCCCCChHHHHHHHh
Q 043043          105 NFDRKLVMGKGAFGNVYRGTL-RNSMKVAVKRGETGSGQGLPEFQTAII  152 (154)
Q Consensus       105 ~f~~~~~iG~g~~g~vy~g~l-~~g~~vaVK~l~~~~~~~~~~f~~e~~  152 (154)
                      +|...+.||+|+||.||++.- .++..||+|.+.....  ...+.+|+.
T Consensus        11 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~   57 (298)
T 1csn_A           11 HYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSD--APQLRDEYR   57 (298)
T ss_dssp             TEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTT--SCCHHHHHH
T ss_pred             ceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCCc--cHHHHHHHH
Confidence            466668899999999999985 5688999999854322  234555554

>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*

Probab=96.63  E-value=0.0021  Score=45.62  Aligned_cols=30  Identities=23%  Similarity=0.120  Sum_probs=25.9

Q ss_pred             ccceeecCCCcceEEEEe-CCCCE--EEEEEec
Q 043043          108 RKLVMGKGAFGNVYRGTL-RNSMK--VAVKRGE  137 (154)
Q Consensus       108 ~~~~iG~g~~g~vy~g~l-~~g~~--vaVK~l~  137 (154)
                      ....||+|+||.||++.. ++|..  ||||.+.
T Consensus        51 i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~   83 (258)
T 1zth_A           51 MGGVISTGKEANVFYADGVFDGKPVAMAVKIYR   83 (258)
T ss_dssp             EEEEEEECSSEEEEEEEEEETTEEEEEEEEEEC
T ss_pred             hCCEEeecceEEEEEEEEcCCCcEeeEEEEEEE
Confidence            346799999999999998 67888  9999874

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=96.63  E-value=0.0014  Score=48.63  Aligned_cols=51  Identities=20%  Similarity=0.297  Sum_probs=36.6

Q ss_pred             hcCccccceeecCCCcceEEEEeC-CCCEEEEEEecCC---CCCChHHHHHHHhh
Q 043043          103 THNFDRKLVMGKGAFGNVYRGTLR-NSMKVAVKRGETG---SGQGLPEFQTAIIV  153 (154)
Q Consensus       103 t~~f~~~~~iG~g~~g~vy~g~l~-~g~~vaVK~l~~~---~~~~~~~f~~e~~~  153 (154)
                      ..+|...++||+|+||.||++... ++..||+|.+...   .......+..|..+
T Consensus        16 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~i   70 (345)
T 1xjd_A           16 IEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRV   70 (345)
T ss_dssp             CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHH
T ss_pred             hHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHH
Confidence            456777789999999999999985 5789999999532   12334455555543

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=96.62  E-value=0.0015  Score=48.63  Aligned_cols=46  Identities=15%  Similarity=0.032  Sum_probs=33.7

Q ss_pred             ccccceeecCCCcceEEEEeC-CCCEEEEEEecCCCCC---ChHHHHHHH
Q 043043          106 FDRKLVMGKGAFGNVYRGTLR-NSMKVAVKRGETGSGQ---GLPEFQTAI  151 (154)
Q Consensus       106 f~~~~~iG~g~~g~vy~g~l~-~g~~vaVK~l~~~~~~---~~~~f~~e~  151 (154)
                      |...+.||+|+||.||++... ++..||+|.+......   ....+.+|+
T Consensus        64 y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~  113 (371)
T 3q60_A           64 LKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEAT  113 (371)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHH
T ss_pred             eeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHH
Confidence            556678999999999999964 6789999999654321   223456664

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=96.61  E-value=0.001  Score=48.74  Aligned_cols=48  Identities=31%  Similarity=0.555  Sum_probs=33.6

Q ss_pred             ccccceeecCCCcceEEEEeCC-----CCEEEEEEecCCCC-CChHHHHHHHhh
Q 043043          106 FDRKLVMGKGAFGNVYRGTLRN-----SMKVAVKRGETGSG-QGLPEFQTAIIV  153 (154)
Q Consensus       106 f~~~~~iG~g~~g~vy~g~l~~-----g~~vaVK~l~~~~~-~~~~~f~~e~~~  153 (154)
                      |...+.||+|+||.||+|....     +..||+|.+..... ....+|.+|+.+
T Consensus        46 ~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~   99 (333)
T 1mqb_A           46 VTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGI   99 (333)
T ss_dssp             EEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHH
T ss_pred             hhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHH
Confidence            3445789999999999998743     23599999964322 223467888764

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=96.61  E-value=0.00099  Score=49.16  Aligned_cols=45  Identities=11%  Similarity=0.122  Sum_probs=32.2

Q ss_pred             cCccccceeecCCCcceEEEEeCC---------CCEEEEEEecCCCCCChHHHHHHHhh
Q 043043          104 HNFDRKLVMGKGAFGNVYRGTLRN---------SMKVAVKRGETGSGQGLPEFQTAIIV  153 (154)
Q Consensus       104 ~~f~~~~~iG~g~~g~vy~g~l~~---------g~~vaVK~l~~~~~~~~~~f~~e~~~  153 (154)
                      ++|...+.||+|+||.||++....         +..||+|.+...     ..|.+|+++
T Consensus        42 ~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-----~~~~~E~~~   95 (352)
T 2jii_A           42 RQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-----GRLFNEQNF   95 (352)
T ss_dssp             CEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-----STHHHHHHH
T ss_pred             CeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-----chHHHHHHH
Confidence            345566789999999999998763         789999998633     246666543

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=96.61  E-value=0.0012  Score=48.69  Aligned_cols=50  Identities=18%  Similarity=0.233  Sum_probs=36.1

Q ss_pred             cCccccceeecCCCcceEEEEeC-CCCEEEEEEecCCCCC--ChHHHHHHHhh
Q 043043          104 HNFDRKLVMGKGAFGNVYRGTLR-NSMKVAVKRGETGSGQ--GLPEFQTAIIV  153 (154)
Q Consensus       104 ~~f~~~~~iG~g~~g~vy~g~l~-~g~~vaVK~l~~~~~~--~~~~f~~e~~~  153 (154)
                      .+|.....||+|+||.||++.-. +|..||||.+......  ....+.+|+.+
T Consensus        24 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~   76 (353)
T 3coi_A           24 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLL   76 (353)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHH
T ss_pred             ceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHH
Confidence            34566678999999999999874 5789999999543221  13457777754

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=96.61  E-value=0.0029  Score=46.73  Aligned_cols=49  Identities=24%  Similarity=0.342  Sum_probs=36.7

Q ss_pred             ccccceeecCCCcceEEEEeC-CCCEEEEEEecC-----CCCCChHHHHHHHhhC
Q 043043          106 FDRKLVMGKGAFGNVYRGTLR-NSMKVAVKRGET-----GSGQGLPEFQTAIIVL  154 (154)
Q Consensus       106 f~~~~~iG~g~~g~vy~g~l~-~g~~vaVK~l~~-----~~~~~~~~f~~e~~~l  154 (154)
                      |...+.||+|+||.||++.-. ++..||+|.+..     ........|.+|+.+|
T Consensus        26 y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l   80 (351)
T 3c0i_A           26 YELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASIC   80 (351)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHH
T ss_pred             eEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHH
Confidence            555678999999999999864 678999999842     1223456788888653

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=96.60  E-value=0.0025  Score=45.83  Aligned_cols=49  Identities=20%  Similarity=0.223  Sum_probs=35.6

Q ss_pred             CccccceeecCCCcceEEEEe-CCCCEEEEEEecCCCCCC---hHHHHHHHhh
Q 043043          105 NFDRKLVMGKGAFGNVYRGTL-RNSMKVAVKRGETGSGQG---LPEFQTAIIV  153 (154)
Q Consensus       105 ~f~~~~~iG~g~~g~vy~g~l-~~g~~vaVK~l~~~~~~~---~~~f~~e~~~  153 (154)
                      +|.....||+|+||.||++.- .++..||+|.+.......   ...|.+|+.+
T Consensus        12 ~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~   64 (294)
T 4eqm_A           12 RYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHN   64 (294)
T ss_dssp             TEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHH
T ss_pred             cEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHH
Confidence            355567899999999999985 467899999985432222   2467777754

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=96.60  E-value=0.0025  Score=46.49  Aligned_cols=46  Identities=26%  Similarity=0.343  Sum_probs=35.5

Q ss_pred             cCccccceeecCCCcceEEEEeCCCCEEEEEEecCCCCCChHHHHHHHhh
Q 043043          104 HNFDRKLVMGKGAFGNVYRGTLRNSMKVAVKRGETGSGQGLPEFQTAIIV  153 (154)
Q Consensus       104 ~~f~~~~~iG~g~~g~vy~g~l~~g~~vaVK~l~~~~~~~~~~f~~e~~~  153 (154)
                      ++|.....||+|+||.||++.. ++..||+|.+...   ....+..|+++
T Consensus        42 ~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~---~~~~~~~e~~~   87 (342)
T 1b6c_B           42 RTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR---EERSWFREAEI   87 (342)
T ss_dssp             HHCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHH
T ss_pred             ccEEEEeeecCCCCcEEEEEEE-cCccEEEEEeCch---hHHHHHHHHHH
Confidence            4577778899999999999998 4789999998532   23556666654

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=96.60  E-value=0.00047  Score=50.39  Aligned_cols=34  Identities=24%  Similarity=0.435  Sum_probs=28.2

Q ss_pred             CccccceeecCCCcceEEEEeC-CCCEEEEEEecC
Q 043043          105 NFDRKLVMGKGAFGNVYRGTLR-NSMKVAVKRGET  138 (154)
Q Consensus       105 ~f~~~~~iG~g~~g~vy~g~l~-~g~~vaVK~l~~  138 (154)
                      +|...+.||+|+||.||++... ++..||+|.+..
T Consensus         3 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~   37 (324)
T 3mtl_A            3 TYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRL   37 (324)
T ss_dssp             SEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC
T ss_pred             ceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEec
Confidence            3555678999999999999975 678999999853

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=96.59  E-value=0.00076  Score=48.27  Aligned_cols=47  Identities=28%  Similarity=0.440  Sum_probs=32.9

Q ss_pred             cccceeecCCCcceEEEEeCC----CCEEEEEEecCCCC-CChHHHHHHHhh
Q 043043          107 DRKLVMGKGAFGNVYRGTLRN----SMKVAVKRGETGSG-QGLPEFQTAIIV  153 (154)
Q Consensus       107 ~~~~~iG~g~~g~vy~g~l~~----g~~vaVK~l~~~~~-~~~~~f~~e~~~  153 (154)
                      ...++||+|+||.||++...+    +..+|+|.+..... .....|.+|+.+
T Consensus        24 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~   75 (298)
T 3pls_A           24 HSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLL   75 (298)
T ss_dssp             EEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHH
T ss_pred             ccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHH
Confidence            344789999999999998632    23799999964322 223567788764

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=96.58  E-value=0.0011  Score=47.07  Aligned_cols=50  Identities=26%  Similarity=0.494  Sum_probs=35.5

Q ss_pred             cCccccceeecCCCcceEEEEeCC----CCEEEEEEecCCC-CCChHHHHHHHhh
Q 043043          104 HNFDRKLVMGKGAFGNVYRGTLRN----SMKVAVKRGETGS-GQGLPEFQTAIIV  153 (154)
Q Consensus       104 ~~f~~~~~iG~g~~g~vy~g~l~~----g~~vaVK~l~~~~-~~~~~~f~~e~~~  153 (154)
                      .+|...+.||+|+||.||++...+    +..||+|.+.... ......|.+|+.+
T Consensus        12 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~   66 (281)
T 3cc6_A           12 EDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVI   66 (281)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHH
T ss_pred             cceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHH
Confidence            446666889999999999998743    2359999986432 2234568888764

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=96.58  E-value=0.0016  Score=46.00  Aligned_cols=49  Identities=27%  Similarity=0.257  Sum_probs=36.4

Q ss_pred             CccccceeecCCCcceEEEEeC-CCCEEEEEEecCC---CCCChHHHHHHHhh
Q 043043          105 NFDRKLVMGKGAFGNVYRGTLR-NSMKVAVKRGETG---SGQGLPEFQTAIIV  153 (154)
Q Consensus       105 ~f~~~~~iG~g~~g~vy~g~l~-~g~~vaVK~l~~~---~~~~~~~f~~e~~~  153 (154)
                      +|.....||+|+||.||++... ++..||+|.+...   .......+.+|+.+
T Consensus        12 ~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~   64 (276)
T 2h6d_A           12 HYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQN   64 (276)
T ss_dssp             TEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHH
T ss_pred             cEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHH
Confidence            4555678999999999999985 6889999998432   23334567777754

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=96.57  E-value=0.00037  Score=50.45  Aligned_cols=51  Identities=29%  Similarity=0.475  Sum_probs=33.4

Q ss_pred             hcCccccceeecCCCcceEEEEeCC----CCEEEEEEecCCCCC--ChHHHHHHHhh
Q 043043          103 THNFDRKLVMGKGAFGNVYRGTLRN----SMKVAVKRGETGSGQ--GLPEFQTAIIV  153 (154)
Q Consensus       103 t~~f~~~~~iG~g~~g~vy~g~l~~----g~~vaVK~l~~~~~~--~~~~f~~e~~~  153 (154)
                      .++|.....||+|+||.||++....    +..||+|.+......  ....|.+|+.+
T Consensus        33 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~   89 (313)
T 3brb_A           33 RNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAAC   89 (313)
T ss_dssp             GGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHH
T ss_pred             HHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHH
Confidence            3456666789999999999998742    347999999643222  23567777764

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=96.57  E-value=0.0012  Score=50.93  Aligned_cols=50  Identities=16%  Similarity=0.145  Sum_probs=36.4

Q ss_pred             cCccccceeecCCCcceEEEEe-CCCCEEEEEEecCC--CCCChHHHHHHHhh
Q 043043          104 HNFDRKLVMGKGAFGNVYRGTL-RNSMKVAVKRGETG--SGQGLPEFQTAIIV  153 (154)
Q Consensus       104 ~~f~~~~~iG~g~~g~vy~g~l-~~g~~vaVK~l~~~--~~~~~~~f~~e~~~  153 (154)
                      ++|...+.||+|+||.||++.- ..+..||+|++...  .......+.+|+.+
T Consensus        62 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~  114 (464)
T 3ttj_A           62 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVL  114 (464)
T ss_dssp             TTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHH
T ss_pred             CCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHH
Confidence            4566678899999999999975 45789999999532  22223567777764

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=96.57  E-value=0.0013  Score=50.15  Aligned_cols=48  Identities=23%  Similarity=0.281  Sum_probs=34.3

Q ss_pred             CccccceeecCCCcceEEEEeC-CCCEEEEEEecCCCCCChHHHHHHHhh
Q 043043          105 NFDRKLVMGKGAFGNVYRGTLR-NSMKVAVKRGETGSGQGLPEFQTAIIV  153 (154)
Q Consensus       105 ~f~~~~~iG~g~~g~vy~g~l~-~g~~vaVK~l~~~~~~~~~~f~~e~~~  153 (154)
                      +|...+.||+|+||.||++.-. ++..||||.+.... ....++.+|+.+
T Consensus        98 ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~-~~~~~~~~E~~~  146 (429)
T 3kvw_A           98 RYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEK-RFHRQAAEEIRI  146 (429)
T ss_dssp             TEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHH
T ss_pred             cEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCcc-chHHHHHHHHHH
Confidence            4666688999999999999875 47899999995321 112455666543

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=96.56  E-value=0.0018  Score=48.97  Aligned_cols=50  Identities=22%  Similarity=0.301  Sum_probs=34.1

Q ss_pred             cCccccceeecCCCcceEEEEeC-CCCEEEEEEecCC---CCCChHHHHHHHhh
Q 043043          104 HNFDRKLVMGKGAFGNVYRGTLR-NSMKVAVKRGETG---SGQGLPEFQTAIIV  153 (154)
Q Consensus       104 ~~f~~~~~iG~g~~g~vy~g~l~-~g~~vaVK~l~~~---~~~~~~~f~~e~~~  153 (154)
                      .+|...++||+|+||.||++... ++..+|+|.+...   .......+..|..+
T Consensus        52 ~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~i  105 (396)
T 4dc2_A           52 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHV  105 (396)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHH
T ss_pred             hHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHH
Confidence            34666788999999999999985 4678999999532   22222345566543

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=96.56  E-value=0.0031  Score=47.12  Aligned_cols=38  Identities=18%  Similarity=0.293  Sum_probs=29.9

Q ss_pred             hhcCccccceeecCCCcceEEEEe-CCCCEEEEEEecCC
Q 043043          102 ATHNFDRKLVMGKGAFGNVYRGTL-RNSMKVAVKRGETG  139 (154)
Q Consensus       102 at~~f~~~~~iG~g~~g~vy~g~l-~~g~~vaVK~l~~~  139 (154)
                      ...+|...+.||+|+||.||++.. .+|..||+|++...
T Consensus         5 ~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~   43 (383)
T 3eb0_A            5 SSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQD   43 (383)
T ss_dssp             -CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECC
T ss_pred             ccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecC
Confidence            445677778999999999999986 56899999998543

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=96.56  E-value=0.002  Score=46.64  Aligned_cols=50  Identities=18%  Similarity=0.251  Sum_probs=36.7

Q ss_pred             cCccccceeecCCCcceEEEEeC-CCCEEEEEEecCCCCCC---hHHHHHHHhh
Q 043043          104 HNFDRKLVMGKGAFGNVYRGTLR-NSMKVAVKRGETGSGQG---LPEFQTAIIV  153 (154)
Q Consensus       104 ~~f~~~~~iG~g~~g~vy~g~l~-~g~~vaVK~l~~~~~~~---~~~f~~e~~~  153 (154)
                      ++|.....||+|+||.||++... ++..||+|.+.......   ...|.+|+.+
T Consensus        34 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~   87 (309)
T 2h34_A           34 GPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREART   87 (309)
T ss_dssp             CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHH
T ss_pred             ccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHH
Confidence            45666788999999999999875 67889999985432222   2557777754

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=96.56  E-value=0.0015  Score=46.26  Aligned_cols=50  Identities=24%  Similarity=0.446  Sum_probs=36.8

Q ss_pred             cCccccceeecCCCcceEEEEe-CCCCEEEEEEecCC---CCCChHHHHHHHhh
Q 043043          104 HNFDRKLVMGKGAFGNVYRGTL-RNSMKVAVKRGETG---SGQGLPEFQTAIIV  153 (154)
Q Consensus       104 ~~f~~~~~iG~g~~g~vy~g~l-~~g~~vaVK~l~~~---~~~~~~~f~~e~~~  153 (154)
                      ++|...+.||+|+||.||++.. .++..||+|.+...   .......+.+|+.+
T Consensus        11 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~   64 (278)
T 3cok_A           11 EDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKI   64 (278)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHH
T ss_pred             ccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHH
Confidence            3456668899999999999987 46889999999422   22234567777764

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=96.55  E-value=0.0016  Score=49.10  Aligned_cols=49  Identities=18%  Similarity=0.241  Sum_probs=36.5

Q ss_pred             CccccceeecCCCcceEEEEeC-CCCEEEEEEecCC---CCCChHHHHHHHhh
Q 043043          105 NFDRKLVMGKGAFGNVYRGTLR-NSMKVAVKRGETG---SGQGLPEFQTAIIV  153 (154)
Q Consensus       105 ~f~~~~~iG~g~~g~vy~g~l~-~g~~vaVK~l~~~---~~~~~~~f~~e~~~  153 (154)
                      +|.....||+|+||.||++... ++..+|+|.+...   .......+.+|+.+
T Consensus        16 ~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~i   68 (384)
T 4fr4_A           16 HFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQI   68 (384)
T ss_dssp             GEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHH
T ss_pred             HeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHH
Confidence            3556688999999999999875 4788999998421   23345677788765

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=96.55  E-value=0.0013  Score=48.61  Aligned_cols=49  Identities=22%  Similarity=0.241  Sum_probs=36.1

Q ss_pred             CccccceeecCCCcceEEEEe-CCCCEEEEEEecCC---CCCChHHHHHHHhh
Q 043043          105 NFDRKLVMGKGAFGNVYRGTL-RNSMKVAVKRGETG---SGQGLPEFQTAIIV  153 (154)
Q Consensus       105 ~f~~~~~iG~g~~g~vy~g~l-~~g~~vaVK~l~~~---~~~~~~~f~~e~~~  153 (154)
                      +|...+.||+|+||.||++.. .++..||+|.+...   .......+.+|+.+
T Consensus        10 ~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~   62 (336)
T 3h4j_B           10 PYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISY   62 (336)
T ss_dssp             TEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHH
T ss_pred             CEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHH
Confidence            455567899999999999996 56789999998421   22234567788764

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=96.54  E-value=0.0016  Score=48.30  Aligned_cols=49  Identities=20%  Similarity=0.257  Sum_probs=36.4

Q ss_pred             CccccceeecCCCcceEEEEeC-CCCEEEEEEecCC---CCCChHHHHHHHhh
Q 043043          105 NFDRKLVMGKGAFGNVYRGTLR-NSMKVAVKRGETG---SGQGLPEFQTAIIV  153 (154)
Q Consensus       105 ~f~~~~~iG~g~~g~vy~g~l~-~g~~vaVK~l~~~---~~~~~~~f~~e~~~  153 (154)
                      +|.....||+|+||.||++... +|..||+|.+...   .......+.+|+.+
T Consensus        42 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~   94 (350)
T 1rdq_E           42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRI   94 (350)
T ss_dssp             GEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHH
T ss_pred             HCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHH
Confidence            4556678999999999999875 5889999998422   23344567777764

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=96.53  E-value=0.0013  Score=46.74  Aligned_cols=50  Identities=20%  Similarity=0.382  Sum_probs=35.2

Q ss_pred             cCccccceeecCCCcceEEEEeCC----CCEEEEEEecCCCC-CChHHHHHHHhh
Q 043043          104 HNFDRKLVMGKGAFGNVYRGTLRN----SMKVAVKRGETGSG-QGLPEFQTAIIV  153 (154)
Q Consensus       104 ~~f~~~~~iG~g~~g~vy~g~l~~----g~~vaVK~l~~~~~-~~~~~f~~e~~~  153 (154)
                      .+|.....||+|+||.||++....    +..||+|.+..... .....|.+|+.+
T Consensus        15 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~   69 (281)
T 1mp8_A           15 ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALT   69 (281)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHH
T ss_pred             HHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHH
Confidence            345566789999999999998743    45799999864322 223567777754

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=96.53  E-value=0.0012  Score=49.18  Aligned_cols=50  Identities=26%  Similarity=0.311  Sum_probs=35.7

Q ss_pred             cCccccceeecCCCcceEEEEeC-CCCEEEEEEecCC---CCCChHHHHHHHhh
Q 043043          104 HNFDRKLVMGKGAFGNVYRGTLR-NSMKVAVKRGETG---SGQGLPEFQTAIIV  153 (154)
Q Consensus       104 ~~f~~~~~iG~g~~g~vy~g~l~-~g~~vaVK~l~~~---~~~~~~~f~~e~~~  153 (154)
                      ++|...++||+|+||.||++... ++..||+|.+...   .......+..|..+
T Consensus        23 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~i   76 (353)
T 3txo_A           23 DNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRI   76 (353)
T ss_dssp             CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHH
T ss_pred             hheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHH
Confidence            45777789999999999999875 5789999998521   12233445555543

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=96.53  E-value=0.0011  Score=50.65  Aligned_cols=51  Identities=24%  Similarity=0.238  Sum_probs=30.1

Q ss_pred             cCccccceeecCCCcceEEEEe-CCCCEEEEEEecCC---CCCChHHHHHHHhhC
Q 043043          104 HNFDRKLVMGKGAFGNVYRGTL-RNSMKVAVKRGETG---SGQGLPEFQTAIIVL  154 (154)
Q Consensus       104 ~~f~~~~~iG~g~~g~vy~g~l-~~g~~vaVK~l~~~---~~~~~~~f~~e~~~l  154 (154)
                      ++|...+.||+|+||.||++.- .+|..||+|.+...   .......+.+|+.+|
T Consensus       148 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l  202 (446)
T 4ejn_A          148 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVL  202 (446)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CC
T ss_pred             HHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHH
Confidence            4466678899999999999986 46789999999532   223334566676543

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=96.52  E-value=0.00057  Score=50.66  Aligned_cols=34  Identities=29%  Similarity=0.399  Sum_probs=28.8

Q ss_pred             cCccccceeecCCCcceEEEEe----CCCCEEEEEEec
Q 043043          104 HNFDRKLVMGKGAFGNVYRGTL----RNSMKVAVKRGE  137 (154)
Q Consensus       104 ~~f~~~~~iG~g~~g~vy~g~l----~~g~~vaVK~l~  137 (154)
                      .+|...+.||+|+||.||++..    .++..||||.+.
T Consensus        54 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~   91 (355)
T 1vzo_A           54 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLK   91 (355)
T ss_dssp             GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEES
T ss_pred             cceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEe
Confidence            4566678899999999999987    367899999984

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=96.52  E-value=0.0021  Score=46.12  Aligned_cols=50  Identities=18%  Similarity=0.187  Sum_probs=37.1

Q ss_pred             cCccccceeecCCCcceEEEEeC-CCCEEEEEEecCC----CCCChHHHHHHHhh
Q 043043          104 HNFDRKLVMGKGAFGNVYRGTLR-NSMKVAVKRGETG----SGQGLPEFQTAIIV  153 (154)
Q Consensus       104 ~~f~~~~~iG~g~~g~vy~g~l~-~g~~vaVK~l~~~----~~~~~~~f~~e~~~  153 (154)
                      ++|.....||+|+||.||++.-. ++..+|+|.+...    .......|.+|+++
T Consensus         5 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~   59 (305)
T 2wtk_C            5 GKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQL   59 (305)
T ss_dssp             CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHH
T ss_pred             cceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHH
Confidence            35666788999999999999874 5789999999432    12334568888764

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=96.52  E-value=0.0024  Score=46.72  Aligned_cols=50  Identities=32%  Similarity=0.469  Sum_probs=36.1

Q ss_pred             cCccccceeecCCCcceEEEEeC-CCC----EEEEEEecCC-CCCChHHHHHHHhh
Q 043043          104 HNFDRKLVMGKGAFGNVYRGTLR-NSM----KVAVKRGETG-SGQGLPEFQTAIIV  153 (154)
Q Consensus       104 ~~f~~~~~iG~g~~g~vy~g~l~-~g~----~vaVK~l~~~-~~~~~~~f~~e~~~  153 (154)
                      .+|...+.||+|+||.||++... ++.    .|++|.+... .......|.+|+.+
T Consensus        15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~   70 (327)
T 3lzb_A           15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV   70 (327)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHH
T ss_pred             hHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHH
Confidence            34666788999999999999863 343    4688888533 34456778888865

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=96.51  E-value=0.0016  Score=50.37  Aligned_cols=49  Identities=22%  Similarity=0.364  Sum_probs=37.3

Q ss_pred             ccccceeecCCCcceEEEEeC-CCCEEEEEEecC--CCCCChHHHHHHHhhC
Q 043043          106 FDRKLVMGKGAFGNVYRGTLR-NSMKVAVKRGET--GSGQGLPEFQTAIIVL  154 (154)
Q Consensus       106 f~~~~~iG~g~~g~vy~g~l~-~g~~vaVK~l~~--~~~~~~~~f~~e~~~l  154 (154)
                      |.....||+|+||.||++.-. ++..||+|.+..  ........+.+|+++|
T Consensus        24 y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l   75 (486)
T 3mwu_A           24 YNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELL   75 (486)
T ss_dssp             EEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHH
T ss_pred             eEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHH
Confidence            555678999999999999874 678999999842  2233456788888653

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=96.51  E-value=0.0014  Score=48.56  Aligned_cols=35  Identities=23%  Similarity=0.467  Sum_probs=27.7

Q ss_pred             cCccccceeecCCCcceEEEEeCC------CCEEEEEEecC
Q 043043          104 HNFDRKLVMGKGAFGNVYRGTLRN------SMKVAVKRGET  138 (154)
Q Consensus       104 ~~f~~~~~iG~g~~g~vy~g~l~~------g~~vaVK~l~~  138 (154)
                      ++|...+.||+|+||.||++...+      +..||||.+..
T Consensus        35 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~   75 (364)
T 3op5_A           35 AAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPS   75 (364)
T ss_dssp             CEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEET
T ss_pred             CeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeec
Confidence            456667889999999999998864      36899999854

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=96.51  E-value=0.0023  Score=46.70  Aligned_cols=44  Identities=20%  Similarity=0.190  Sum_probs=33.7

Q ss_pred             ceeecCCCcceEEEEeC-CCCEEEEEEecCC--CCCChHHHHHHHhh
Q 043043          110 LVMGKGAFGNVYRGTLR-NSMKVAVKRGETG--SGQGLPEFQTAIIV  153 (154)
Q Consensus       110 ~~iG~g~~g~vy~g~l~-~g~~vaVK~l~~~--~~~~~~~f~~e~~~  153 (154)
                      +.||+|+||.||++... ++..||+|.+...  ......++.+|+.+
T Consensus        35 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~   81 (327)
T 3lm5_A           35 KELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAV   81 (327)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHH
T ss_pred             ceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHH
Confidence            67999999999999875 5789999999532  22335677777754

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=96.50  E-value=0.0022  Score=46.89  Aligned_cols=42  Identities=19%  Similarity=0.162  Sum_probs=31.8

Q ss_pred             cceeecCCCcceEEEEeC-CCCEEEEEEecCCCCCChHHHHHHHhh
Q 043043          109 KLVMGKGAFGNVYRGTLR-NSMKVAVKRGETGSGQGLPEFQTAIIV  153 (154)
Q Consensus       109 ~~~iG~g~~g~vy~g~l~-~g~~vaVK~l~~~~~~~~~~f~~e~~~  153 (154)
                      .+.||+|+||.||++... ++..||||.+...   ....+.+|+.+
T Consensus        16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~   58 (325)
T 3kn6_A           16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKR---MEANTQKEITA   58 (325)
T ss_dssp             SCCSEEETTEEEEEEEETTTCCEEEEEEEEGG---GHHHHHHHHHH
T ss_pred             CCccccCCCeEEEEEEECCCCCEEEEEEEChh---hhhhHHHHHHH
Confidence            367999999999999885 5789999999532   23456666654

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=96.49  E-value=0.0029  Score=48.72  Aligned_cols=49  Identities=22%  Similarity=0.316  Sum_probs=37.4

Q ss_pred             ccccceeecCCCcceEEEEeC-CCCEEEEEEecCC---CCCChHHHHHHHhhC
Q 043043          106 FDRKLVMGKGAFGNVYRGTLR-NSMKVAVKRGETG---SGQGLPEFQTAIIVL  154 (154)
Q Consensus       106 f~~~~~iG~g~~g~vy~g~l~-~g~~vaVK~l~~~---~~~~~~~f~~e~~~l  154 (154)
                      |...++||+|+||.||++.-. ++..||||.+...   .......+.+|+.+|
T Consensus        28 y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l   80 (484)
T 3nyv_A           28 YKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLL   80 (484)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHH
T ss_pred             eEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHH
Confidence            555678999999999999875 6789999999532   233456788888653

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=96.48  E-value=0.0017  Score=51.16  Aligned_cols=50  Identities=20%  Similarity=0.298  Sum_probs=36.6

Q ss_pred             cCccccceeecCCCcceEEEEeC-CCCEEEEEEecCC---CCCChHHHHHHHhh
Q 043043          104 HNFDRKLVMGKGAFGNVYRGTLR-NSMKVAVKRGETG---SGQGLPEFQTAIIV  153 (154)
Q Consensus       104 ~~f~~~~~iG~g~~g~vy~g~l~-~g~~vaVK~l~~~---~~~~~~~f~~e~~~  153 (154)
                      .+|...++||+|+||.||++... +|..||+|.+...   .......+..|+.+
T Consensus       185 ~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~i  238 (543)
T 3c4z_A          185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKI  238 (543)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHH
T ss_pred             hheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHH
Confidence            34555678999999999999985 5889999999421   22334567777764

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=96.48  E-value=0.0015  Score=46.82  Aligned_cols=52  Identities=23%  Similarity=0.294  Sum_probs=25.3

Q ss_pred             hcCccccceeecCCCcceEEEEe-CCCCEEEEEEecCCC-CCChHHHHHHHhhC
Q 043043          103 THNFDRKLVMGKGAFGNVYRGTL-RNSMKVAVKRGETGS-GQGLPEFQTAIIVL  154 (154)
Q Consensus       103 t~~f~~~~~iG~g~~g~vy~g~l-~~g~~vaVK~l~~~~-~~~~~~f~~e~~~l  154 (154)
                      ..+|...+.||+|+||.||++.. .++..||+|.+.... .....+|.+|+.++
T Consensus        14 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l   67 (303)
T 2vwi_A           14 RDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAM   67 (303)
T ss_dssp             CCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CC
T ss_pred             hhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHH
Confidence            34566678899999999999986 367899999985432 22345677777653

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=96.47  E-value=0.0018  Score=46.38  Aligned_cols=36  Identities=25%  Similarity=0.338  Sum_probs=29.7

Q ss_pred             cCccccceeecCCCcceEEEEeC-CCCEEEEEEecCC
Q 043043          104 HNFDRKLVMGKGAFGNVYRGTLR-NSMKVAVKRGETG  139 (154)
Q Consensus       104 ~~f~~~~~iG~g~~g~vy~g~l~-~g~~vaVK~l~~~  139 (154)
                      .+|.....||+|+||.||++... ++..||+|.+...
T Consensus        17 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~   53 (298)
T 1phk_A           17 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVT   53 (298)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETT
T ss_pred             hccceeeeecCCCceEEEEEEEcCcCceEEEEEEecc
Confidence            45666788999999999999885 5789999999643

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=96.45  E-value=0.0014  Score=46.58  Aligned_cols=50  Identities=22%  Similarity=0.342  Sum_probs=35.7

Q ss_pred             cCccccceeecCCCcceEEEEeC-CCCEEEEEEecCC---CCCChHHHHHHHhh
Q 043043          104 HNFDRKLVMGKGAFGNVYRGTLR-NSMKVAVKRGETG---SGQGLPEFQTAIIV  153 (154)
Q Consensus       104 ~~f~~~~~iG~g~~g~vy~g~l~-~g~~vaVK~l~~~---~~~~~~~f~~e~~~  153 (154)
                      ++|.....||+|+||.||++... ++..||+|.+...   .......+.+|+++
T Consensus         9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~   62 (279)
T 3fdn_A            9 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEI   62 (279)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHH
T ss_pred             ccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHH
Confidence            44666678999999999999875 4678999998421   12234567777754

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=96.45  E-value=0.0013  Score=48.88  Aligned_cols=50  Identities=24%  Similarity=0.289  Sum_probs=36.2

Q ss_pred             cCccccceeecCCCcceEEEEeCC-CCEEEEEEecCC---CCCChHHHHHHHhh
Q 043043          104 HNFDRKLVMGKGAFGNVYRGTLRN-SMKVAVKRGETG---SGQGLPEFQTAIIV  153 (154)
Q Consensus       104 ~~f~~~~~iG~g~~g~vy~g~l~~-g~~vaVK~l~~~---~~~~~~~f~~e~~~  153 (154)
                      .+|....+||+|+||.||++...+ +..||+|.+...   .......+..|..+
T Consensus        20 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~   73 (353)
T 2i0e_A           20 TDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRV   73 (353)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHH
T ss_pred             HHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHH
Confidence            457777889999999999999864 678999999532   22334556666543

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=96.45  E-value=0.0029  Score=48.25  Aligned_cols=43  Identities=23%  Similarity=0.089  Sum_probs=31.6

Q ss_pred             ccceeecCCCcceEEEEeCCCCEEEEEEecCCCCCChHHHHHHHhh
Q 043043          108 RKLVMGKGAFGNVYRGTLRNSMKVAVKRGETGSGQGLPEFQTAIIV  153 (154)
Q Consensus       108 ~~~~iG~g~~g~vy~g~l~~g~~vaVK~l~~~~~~~~~~f~~e~~~  153 (154)
                      ..++||+|+||+||.....+|..||||++...   ..+.+.+|+.+
T Consensus        19 ~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~---~~~~~~~E~~~   61 (434)
T 2rio_A           19 SEKILGYGSSGTVVFQGSFQGRPVAVKRMLID---FCDIALMEIKL   61 (434)
T ss_dssp             EEEEEEECSTTCEEEEEESSSSEEEEEEEEGG---GHHHHHHHHHH
T ss_pred             ccCeEeeCCCeEEEEEEEECCeEEEEEEEcHH---HHHHHHHHHHH
Confidence            34779999999998766667899999998532   13456667654

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=96.45  E-value=0.0031  Score=44.93  Aligned_cols=48  Identities=23%  Similarity=0.432  Sum_probs=32.9

Q ss_pred             cCccccceeecCCCcceEEEEe-CCCCEEEEEEecCCCCCChHHHHHHHhh
Q 043043          104 HNFDRKLVMGKGAFGNVYRGTL-RNSMKVAVKRGETGSGQGLPEFQTAIIV  153 (154)
Q Consensus       104 ~~f~~~~~iG~g~~g~vy~g~l-~~g~~vaVK~l~~~~~~~~~~f~~e~~~  153 (154)
                      ++|.....||+|+||.||++.- .++..||+|.+......  .++.+|+++
T Consensus         9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~e~~~   57 (296)
T 4hgt_A            9 NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH--PQLHIESKI   57 (296)
T ss_dssp             --CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC---C--CCHHHHHHH
T ss_pred             CceEEeeeecCCCCeEEEEEEEcCCCceEEEEeecccccc--hHHHHHHHH
Confidence            4577778899999999999986 56789999987543222  235555543

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=96.44  E-value=0.0012  Score=49.19  Aligned_cols=50  Identities=26%  Similarity=0.341  Sum_probs=36.9

Q ss_pred             cCccccceeecCCCcceEEEEeC-CCCEEEEEEecCCCCC--ChHHHHHHHhh
Q 043043          104 HNFDRKLVMGKGAFGNVYRGTLR-NSMKVAVKRGETGSGQ--GLPEFQTAIIV  153 (154)
Q Consensus       104 ~~f~~~~~iG~g~~g~vy~g~l~-~g~~vaVK~l~~~~~~--~~~~f~~e~~~  153 (154)
                      .+|...+.||+|+||.||++... ++..||+|.+......  ....|.+|+.+
T Consensus        29 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~i   81 (362)
T 2bdw_A           29 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARI   81 (362)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHH
T ss_pred             cCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHH
Confidence            34666788999999999999874 5789999999643222  23457778765

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=96.44  E-value=0.0014  Score=48.92  Aligned_cols=35  Identities=29%  Similarity=0.442  Sum_probs=29.4

Q ss_pred             hcCccccceeecCCCcceEEEEeC-CCCEEEEEEec
Q 043043          103 THNFDRKLVMGKGAFGNVYRGTLR-NSMKVAVKRGE  137 (154)
Q Consensus       103 t~~f~~~~~iG~g~~g~vy~g~l~-~g~~vaVK~l~  137 (154)
                      ..+|...+.||+|+||.||++.-. ++..||||.+.
T Consensus        53 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~   88 (382)
T 2vx3_A           53 MDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIK   88 (382)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEC
T ss_pred             eeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEe
Confidence            355667788999999999999865 57889999995

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=96.43  E-value=0.0014  Score=46.95  Aligned_cols=48  Identities=33%  Similarity=0.499  Sum_probs=32.9

Q ss_pred             ccccceeecCCCcceEEEEeCCC----CEEEEEEecCCCC-CChHHHHHHHhh
Q 043043          106 FDRKLVMGKGAFGNVYRGTLRNS----MKVAVKRGETGSG-QGLPEFQTAIIV  153 (154)
Q Consensus       106 f~~~~~iG~g~~g~vy~g~l~~g----~~vaVK~l~~~~~-~~~~~f~~e~~~  153 (154)
                      |.....||+|+||.||+|...+.    ..+|+|.+..... .....|.+|+.+
T Consensus        27 y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~   79 (298)
T 3f66_A           27 VHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGII   79 (298)
T ss_dssp             EEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHH
T ss_pred             hhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHH
Confidence            44557899999999999987432    3589999864322 223567788764

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=96.43  E-value=0.0027  Score=45.42  Aligned_cols=48  Identities=25%  Similarity=0.257  Sum_probs=32.1

Q ss_pred             ccccc-eeecCCCcceEEEEeC---CCCEEEEEEecCCCCC--ChHHHHHHHhh
Q 043043          106 FDRKL-VMGKGAFGNVYRGTLR---NSMKVAVKRGETGSGQ--GLPEFQTAIIV  153 (154)
Q Consensus       106 f~~~~-~iG~g~~g~vy~g~l~---~g~~vaVK~l~~~~~~--~~~~f~~e~~~  153 (154)
                      |.... .||+|+||.||++...   .+..||||.+......  ...+|.+|+++
T Consensus        18 y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~   71 (291)
T 1xbb_A           18 LTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANV   71 (291)
T ss_dssp             EEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHH
T ss_pred             hhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHH
Confidence            33334 8999999999999652   3578999999643222  24568888765

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=96.42  E-value=0.0023  Score=46.58  Aligned_cols=48  Identities=19%  Similarity=0.302  Sum_probs=33.6

Q ss_pred             cCccccceeecCCCcceEEEEeC-CCCEEEEEEecCCCC-CChHHHHHHH
Q 043043          104 HNFDRKLVMGKGAFGNVYRGTLR-NSMKVAVKRGETGSG-QGLPEFQTAI  151 (154)
Q Consensus       104 ~~f~~~~~iG~g~~g~vy~g~l~-~g~~vaVK~l~~~~~-~~~~~f~~e~  151 (154)
                      ++|.....||+|+||.||++... ++..||+|.+..... ....++..|+
T Consensus        22 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~   71 (327)
T 3aln_A           22 EDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDL   71 (327)
T ss_dssp             CSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHH
T ss_pred             HHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHH
Confidence            44666688999999999999984 678999999964322 1223455554

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=96.42  E-value=0.0023  Score=46.79  Aligned_cols=49  Identities=20%  Similarity=0.207  Sum_probs=35.6

Q ss_pred             CccccceeecCCCcceEEEEeC-CCCEEEEEEecCC---CCCChHHHHHHHhh
Q 043043          105 NFDRKLVMGKGAFGNVYRGTLR-NSMKVAVKRGETG---SGQGLPEFQTAIIV  153 (154)
Q Consensus       105 ~f~~~~~iG~g~~g~vy~g~l~-~g~~vaVK~l~~~---~~~~~~~f~~e~~~  153 (154)
                      +|...+.||+|+||.||++... +|..+|+|.+...   .......+.+|..+
T Consensus         7 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~   59 (318)
T 1fot_A            7 DFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLM   59 (318)
T ss_dssp             GEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHH
T ss_pred             HcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHH
Confidence            4566688999999999999875 6889999999532   22334556666654

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=96.42  E-value=0.0016  Score=51.76  Aligned_cols=50  Identities=26%  Similarity=0.347  Sum_probs=37.4

Q ss_pred             cCccccceeecCCCcceEEEEeC-CCCEEEEEEecCC---CCCChHHHHHHHhh
Q 043043          104 HNFDRKLVMGKGAFGNVYRGTLR-NSMKVAVKRGETG---SGQGLPEFQTAIIV  153 (154)
Q Consensus       104 ~~f~~~~~iG~g~~g~vy~g~l~-~g~~vaVK~l~~~---~~~~~~~f~~e~~~  153 (154)
                      ++|...++||+|+||.||++... +|..||+|.+...   .......+.+|+.+
T Consensus       184 ~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~i  237 (576)
T 2acx_A          184 NTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQI  237 (576)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHH
T ss_pred             cceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHH
Confidence            44666678999999999999875 6889999999431   23344567777765

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=96.41  E-value=0.001  Score=47.49  Aligned_cols=48  Identities=25%  Similarity=0.449  Sum_probs=35.8

Q ss_pred             CccccceeecCCCcceEEEEe-CCCCEEEEEEecCCCCCChHHHHHHHhh
Q 043043          105 NFDRKLVMGKGAFGNVYRGTL-RNSMKVAVKRGETGSGQGLPEFQTAIIV  153 (154)
Q Consensus       105 ~f~~~~~iG~g~~g~vy~g~l-~~g~~vaVK~l~~~~~~~~~~f~~e~~~  153 (154)
                      +|.....||+|+||.||++.- .++..||+|.+... ......+.+|+++
T Consensus         7 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~   55 (303)
T 1zy4_A            7 DFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT-EEKLSTILSEVML   55 (303)
T ss_dssp             HEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE-HHHHHHHHHHHHH
T ss_pred             cchhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc-HHHHHHHHHHHHH
Confidence            466678899999999999986 46889999998532 1223567777764

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=96.41  E-value=0.0016  Score=48.72  Aligned_cols=49  Identities=20%  Similarity=0.243  Sum_probs=35.9

Q ss_pred             CccccceeecC--CCcceEEEEeC-CCCEEEEEEecCCC--CCChHHHHHHHhh
Q 043043          105 NFDRKLVMGKG--AFGNVYRGTLR-NSMKVAVKRGETGS--GQGLPEFQTAIIV  153 (154)
Q Consensus       105 ~f~~~~~iG~g--~~g~vy~g~l~-~g~~vaVK~l~~~~--~~~~~~f~~e~~~  153 (154)
                      +|.....||+|  +||.||++... ++..||||.+....  ......+.+|+.+
T Consensus        26 ~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~   79 (389)
T 3gni_B           26 CYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHV   79 (389)
T ss_dssp             GEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHH
T ss_pred             cEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHH
Confidence            45556789999  99999999985 68899999995432  2223456677765

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=96.39  E-value=0.0027  Score=46.40  Aligned_cols=48  Identities=19%  Similarity=0.190  Sum_probs=35.4

Q ss_pred             CccccceeecCCCcceEEEEeC-CCCEEEEEEecCCCCCChHHHHHHHhh
Q 043043          105 NFDRKLVMGKGAFGNVYRGTLR-NSMKVAVKRGETGSGQGLPEFQTAIIV  153 (154)
Q Consensus       105 ~f~~~~~iG~g~~g~vy~g~l~-~g~~vaVK~l~~~~~~~~~~f~~e~~~  153 (154)
                      +|.....||+|+||.||++.-. ++..+|+|.+... ......+.+|+.+
T Consensus         6 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~-~~~~~~~~~E~~~   54 (321)
T 1tki_A            6 KYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVK-GTDQVLVKKEISI   54 (321)
T ss_dssp             TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCC-THHHHHHHHHHHH
T ss_pred             ceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecC-cccHHHHHHHHHH
Confidence            4555678999999999999875 5678999998532 2223457778765

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=96.38  E-value=0.0017  Score=52.31  Aligned_cols=51  Identities=18%  Similarity=0.187  Sum_probs=37.7

Q ss_pred             cCccccceeecCCCcceEEEEeC--CCCEEEEEEecCCC-CCChHHHHHHHhhC
Q 043043          104 HNFDRKLVMGKGAFGNVYRGTLR--NSMKVAVKRGETGS-GQGLPEFQTAIIVL  154 (154)
Q Consensus       104 ~~f~~~~~iG~g~~g~vy~g~l~--~g~~vaVK~l~~~~-~~~~~~f~~e~~~l  154 (154)
                      ++|.....||+|+||.||++...  ++..||||.+.... ......|.+|+++|
T Consensus        80 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l  133 (681)
T 2pzi_A           80 GQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFL  133 (681)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGG
T ss_pred             CceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHH
Confidence            45666788999999999999875  57899999985332 22234677887654

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=96.38  E-value=0.0025  Score=49.38  Aligned_cols=49  Identities=27%  Similarity=0.247  Sum_probs=36.3

Q ss_pred             CccccceeecCCCcceEEEEeC-CCCEEEEEEecCC---CCCChHHHHHHHhh
Q 043043          105 NFDRKLVMGKGAFGNVYRGTLR-NSMKVAVKRGETG---SGQGLPEFQTAIIV  153 (154)
Q Consensus       105 ~f~~~~~iG~g~~g~vy~g~l~-~g~~vaVK~l~~~---~~~~~~~f~~e~~~  153 (154)
                      +|.....||+|+||.||++... +|..||||.+...   .......+.+|+.+
T Consensus        17 ~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~   69 (476)
T 2y94_A           17 HYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQN   69 (476)
T ss_dssp             TEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHH
T ss_pred             CEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHH
Confidence            3555678999999999999875 6899999999532   22234567788765

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=96.37  E-value=0.0018  Score=47.17  Aligned_cols=33  Identities=36%  Similarity=0.471  Sum_probs=28.9

Q ss_pred             cCccccceeecCCCcceEEEEeCCCCEEEEEEec
Q 043043          104 HNFDRKLVMGKGAFGNVYRGTLRNSMKVAVKRGE  137 (154)
Q Consensus       104 ~~f~~~~~iG~g~~g~vy~g~l~~g~~vaVK~l~  137 (154)
                      ++|...+.||+|+||.||++... +..||||.+.
T Consensus        37 ~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~   69 (337)
T 3mdy_A           37 KQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFF   69 (337)
T ss_dssp             HHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEE
T ss_pred             cceEEEeEeecCCCeEEEEEEEC-CceEEEEEEe
Confidence            45777789999999999999986 7899999985

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=96.37  E-value=0.002  Score=47.95  Aligned_cols=50  Identities=16%  Similarity=0.128  Sum_probs=36.1

Q ss_pred             cCccccceeecCCCcceEEEEeC-CCCEEEEEEecCCCC--CChHHHHHHHhh
Q 043043          104 HNFDRKLVMGKGAFGNVYRGTLR-NSMKVAVKRGETGSG--QGLPEFQTAIIV  153 (154)
Q Consensus       104 ~~f~~~~~iG~g~~g~vy~g~l~-~g~~vaVK~l~~~~~--~~~~~f~~e~~~  153 (154)
                      .+|.....||+|+||.||++.-. ++..||||.+.....  .....+.+|+.+
T Consensus        25 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~   77 (371)
T 2xrw_A           25 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVL   77 (371)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHH
T ss_pred             hheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHH
Confidence            45666788999999999999864 578899999964321  123457777754

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=96.36  E-value=0.0023  Score=45.70  Aligned_cols=46  Identities=20%  Similarity=0.330  Sum_probs=33.3

Q ss_pred             ccceeecCCCcceEEEEeC-CCCEEEEEEecCC--CCCChHHHHHHHhh
Q 043043          108 RKLVMGKGAFGNVYRGTLR-NSMKVAVKRGETG--SGQGLPEFQTAIIV  153 (154)
Q Consensus       108 ~~~~iG~g~~g~vy~g~l~-~g~~vaVK~l~~~--~~~~~~~f~~e~~~  153 (154)
                      ....||+|+||.||++... ++..||+|.+...  .......|.+|+.+
T Consensus        30 ~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~   78 (290)
T 1t4h_A           30 FDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEM   78 (290)
T ss_dssp             EEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHH
T ss_pred             eeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHH
Confidence            3457999999999999874 5678999998533  22233567777764

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=96.36  E-value=0.0017  Score=48.61  Aligned_cols=50  Identities=24%  Similarity=0.324  Sum_probs=28.0

Q ss_pred             cCccccceeecCCCcceEEEEe-CCCCEEEEEEecCCC--CCChHHHHHHHhh
Q 043043          104 HNFDRKLVMGKGAFGNVYRGTL-RNSMKVAVKRGETGS--GQGLPEFQTAIIV  153 (154)
Q Consensus       104 ~~f~~~~~iG~g~~g~vy~g~l-~~g~~vaVK~l~~~~--~~~~~~f~~e~~~  153 (154)
                      .+|.....||+|+||.||++.- .++..||+|++....  ......+.+|+.+
T Consensus         9 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~   61 (388)
T 3oz6_A            9 RKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMI   61 (388)
T ss_dssp             TTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHH
T ss_pred             CceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHH
Confidence            4566678899999999999986 467899999985321  1123446666654

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=96.35  E-value=0.002  Score=47.64  Aligned_cols=49  Identities=24%  Similarity=0.255  Sum_probs=34.6

Q ss_pred             CccccceeecCCCcceEEEEeC-CCCEEEEEEecCCCCCC---hHHHHHHHhh
Q 043043          105 NFDRKLVMGKGAFGNVYRGTLR-NSMKVAVKRGETGSGQG---LPEFQTAIIV  153 (154)
Q Consensus       105 ~f~~~~~iG~g~~g~vy~g~l~-~g~~vaVK~l~~~~~~~---~~~f~~e~~~  153 (154)
                      +|...+.||+|+||.||++... ++..+|+|.+.......   ...+.+|..+
T Consensus        10 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~   62 (345)
T 3a8x_A           10 DFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHV   62 (345)
T ss_dssp             GEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHH
T ss_pred             heEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHH
Confidence            4566688999999999999985 57889999996432221   2345566543

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=96.35  E-value=0.0038  Score=48.33  Aligned_cols=49  Identities=22%  Similarity=0.318  Sum_probs=33.3

Q ss_pred             ccccceeecCCCcceEEEEeC-CCCEEEEEEecCC--CCCChHHHHHHHhhC
Q 043043          106 FDRKLVMGKGAFGNVYRGTLR-NSMKVAVKRGETG--SGQGLPEFQTAIIVL  154 (154)
Q Consensus       106 f~~~~~iG~g~~g~vy~g~l~-~g~~vaVK~l~~~--~~~~~~~f~~e~~~l  154 (154)
                      |...+.||+|+||.||++.-. ++..+|+|.+...  .......+.+|+.+|
T Consensus        39 y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l   90 (494)
T 3lij_A           39 YQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVL   90 (494)
T ss_dssp             EEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHH
T ss_pred             eEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHH
Confidence            555678999999999999875 5789999999533  233456788888653

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=96.34  E-value=0.00087  Score=49.33  Aligned_cols=35  Identities=26%  Similarity=0.387  Sum_probs=28.9

Q ss_pred             cCccccceeecCCCcceEEEEe-CCCCEEEEEEecC
Q 043043          104 HNFDRKLVMGKGAFGNVYRGTL-RNSMKVAVKRGET  138 (154)
Q Consensus       104 ~~f~~~~~iG~g~~g~vy~g~l-~~g~~vaVK~l~~  138 (154)
                      ++|.....||+|+||.||++.- .++..||||.+..
T Consensus        24 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~   59 (335)
T 3dls_A           24 QKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKK   59 (335)
T ss_dssp             HHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEES
T ss_pred             cceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEeh
Confidence            3466667899999999999985 4678999999964

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=96.33  E-value=0.0021  Score=46.65  Aligned_cols=49  Identities=24%  Similarity=0.246  Sum_probs=33.3

Q ss_pred             CccccceeecCCCcceEEEEeC-CCCEEEEEEecCCC--------CCChHHHHHHHhh
Q 043043          105 NFDRKLVMGKGAFGNVYRGTLR-NSMKVAVKRGETGS--------GQGLPEFQTAIIV  153 (154)
Q Consensus       105 ~f~~~~~iG~g~~g~vy~g~l~-~g~~vaVK~l~~~~--------~~~~~~f~~e~~~  153 (154)
                      +|.....||+|+||.||++... ++..||||.+....        ......|.+|+++
T Consensus        11 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~   68 (322)
T 2ycf_A           11 EYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEI   68 (322)
T ss_dssp             HEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHH
T ss_pred             ceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHH
Confidence            3566678999999999999875 56889999985321        1112347777764

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=96.33  E-value=0.0014  Score=47.25  Aligned_cols=36  Identities=28%  Similarity=0.536  Sum_probs=28.5

Q ss_pred             hcCccccceeecCCCcceEEEEe-CCCCEEEEEEecC
Q 043043          103 THNFDRKLVMGKGAFGNVYRGTL-RNSMKVAVKRGET  138 (154)
Q Consensus       103 t~~f~~~~~iG~g~~g~vy~g~l-~~g~~vaVK~l~~  138 (154)
                      .++|...+.||+|+||.||++.. .++..||+|.+..
T Consensus        30 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~   66 (312)
T 2iwi_A           30 EAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPR   66 (312)
T ss_dssp             ---CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCS
T ss_pred             hhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEec
Confidence            34577778899999999999986 4678999999953

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=96.31  E-value=0.0015  Score=47.33  Aligned_cols=48  Identities=25%  Similarity=0.255  Sum_probs=34.3

Q ss_pred             CccccceeecCCCcceEEEEe--CCCCEEEEEEecCCCCCChHHHHHHHhh
Q 043043          105 NFDRKLVMGKGAFGNVYRGTL--RNSMKVAVKRGETGSGQGLPEFQTAIIV  153 (154)
Q Consensus       105 ~f~~~~~iG~g~~g~vy~g~l--~~g~~vaVK~l~~~~~~~~~~f~~e~~~  153 (154)
                      +|.....||+|+||.||++.-  .++..||+|.+.... .....+.+|+++
T Consensus        15 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~e~~~   64 (339)
T 1z57_A           15 RYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVD-RYCEAARSEIQV   64 (339)
T ss_dssp             TEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSSH-HHHHHHHHHHHH
T ss_pred             ceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecCC-chhHHHHHHHHH
Confidence            456667899999999999986  367899999995321 123456666654

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=96.29  E-value=0.0017  Score=49.58  Aligned_cols=35  Identities=34%  Similarity=0.343  Sum_probs=27.8

Q ss_pred             cCccccceeecCCCcceEEEEeCCCCEEEEEEecC
Q 043043          104 HNFDRKLVMGKGAFGNVYRGTLRNSMKVAVKRGET  138 (154)
Q Consensus       104 ~~f~~~~~iG~g~~g~vy~g~l~~g~~vaVK~l~~  138 (154)
                      .+|...++||+|+||+||.....++..||||++..
T Consensus        24 ~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~   58 (432)
T 3p23_A           24 ISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILP   58 (432)
T ss_dssp             EEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECT
T ss_pred             EEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECH
Confidence            44677789999999996655555789999999953

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=96.27  E-value=0.0024  Score=46.55  Aligned_cols=51  Identities=25%  Similarity=0.340  Sum_probs=36.8

Q ss_pred             hcCccccceeecCCCcceEEEEeCC------CCEEEEEEecCCCC-CChHHHHHHHhh
Q 043043          103 THNFDRKLVMGKGAFGNVYRGTLRN------SMKVAVKRGETGSG-QGLPEFQTAIIV  153 (154)
Q Consensus       103 t~~f~~~~~iG~g~~g~vy~g~l~~------g~~vaVK~l~~~~~-~~~~~f~~e~~~  153 (154)
                      .++|...+.||+|+||.||++....      +..||+|.+..... .....|.+|+.+
T Consensus        45 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~  102 (333)
T 2i1m_A           45 RNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKI  102 (333)
T ss_dssp             TTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHH
T ss_pred             HHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHH
Confidence            4567777889999999999998642      24799999964322 223567788765

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=96.25  E-value=0.0016  Score=46.42  Aligned_cols=49  Identities=24%  Similarity=0.361  Sum_probs=28.0

Q ss_pred             CccccceeecCCCcceEEEEeC--CCC--EEEEEEecCCC---CCChHHHHHHHhh
Q 043043          105 NFDRKLVMGKGAFGNVYRGTLR--NSM--KVAVKRGETGS---GQGLPEFQTAIIV  153 (154)
Q Consensus       105 ~f~~~~~iG~g~~g~vy~g~l~--~g~--~vaVK~l~~~~---~~~~~~f~~e~~~  153 (154)
                      +|.....||+|+||.||++...  ++.  .||+|.+....   ......|.+|+++
T Consensus        19 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~   74 (291)
T 1u46_A           19 DLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA   74 (291)
T ss_dssp             GEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHH
T ss_pred             HeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHH
Confidence            4556678999999999999863  333  68999985432   2223567788764

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=96.24  E-value=0.001  Score=48.53  Aligned_cols=36  Identities=31%  Similarity=0.620  Sum_probs=29.6

Q ss_pred             hcCccccceeecCCCcceEEEEe-CCCCEEEEEEecC
Q 043043          103 THNFDRKLVMGKGAFGNVYRGTL-RNSMKVAVKRGET  138 (154)
Q Consensus       103 t~~f~~~~~iG~g~~g~vy~g~l-~~g~~vaVK~l~~  138 (154)
                      ..+|.....||+|+||.||++.. .++..||||.+..
T Consensus        42 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~   78 (320)
T 3a99_A           42 ESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEK   78 (320)
T ss_dssp             TTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEG
T ss_pred             cCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEec
Confidence            34566778899999999999985 4678999999953

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=96.24  E-value=0.0052  Score=47.69  Aligned_cols=50  Identities=18%  Similarity=0.187  Sum_probs=34.2

Q ss_pred             cCccccceeecCCCcceEEEEeC-CCCEEEEEEecCCCC-------------CChHHHHHHHhh
Q 043043          104 HNFDRKLVMGKGAFGNVYRGTLR-NSMKVAVKRGETGSG-------------QGLPEFQTAIIV  153 (154)
Q Consensus       104 ~~f~~~~~iG~g~~g~vy~g~l~-~g~~vaVK~l~~~~~-------------~~~~~f~~e~~~  153 (154)
                      ..|...+.||+|+||.||++.-. ++..+|+|.+.....             .....+.+|+.+
T Consensus        36 ~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~   99 (504)
T 3q5i_A           36 ESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISL   99 (504)
T ss_dssp             GTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHH
T ss_pred             cceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHH
Confidence            44666688999999999999875 468899999853211             234567788765

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=96.23  E-value=0.0044  Score=46.38  Aligned_cols=33  Identities=33%  Similarity=0.454  Sum_probs=28.2

Q ss_pred             CccccceeecCCCcceEEEEeC-CCCEEEEEEec
Q 043043          105 NFDRKLVMGKGAFGNVYRGTLR-NSMKVAVKRGE  137 (154)
Q Consensus       105 ~f~~~~~iG~g~~g~vy~g~l~-~g~~vaVK~l~  137 (154)
                      +|...++||+|+||.||++... ++..+|+|.+.
T Consensus        39 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~   72 (373)
T 2r5t_A           39 DFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQ   72 (373)
T ss_dssp             GEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEE
T ss_pred             heEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEE
Confidence            4666788999999999999985 46889999995

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=96.23  E-value=0.0027  Score=45.16  Aligned_cols=49  Identities=29%  Similarity=0.375  Sum_probs=35.9

Q ss_pred             CccccceeecCCCcceEEEEeC-CCCEEEEEEecCC---CCCChHHHHHHHhh
Q 043043          105 NFDRKLVMGKGAFGNVYRGTLR-NSMKVAVKRGETG---SGQGLPEFQTAIIV  153 (154)
Q Consensus       105 ~f~~~~~iG~g~~g~vy~g~l~-~g~~vaVK~l~~~---~~~~~~~f~~e~~~  153 (154)
                      +|.....||+|+||.||++... ++..||+|.+...   .......+.+|+++
T Consensus        15 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~   67 (284)
T 2vgo_A           15 DFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEI   67 (284)
T ss_dssp             GEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHH
T ss_pred             hceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHH
Confidence            4556678999999999999875 4678999998421   22334567777764

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=96.22  E-value=0.0027  Score=46.87  Aligned_cols=48  Identities=19%  Similarity=0.129  Sum_probs=34.4

Q ss_pred             CccccceeecCCCcceEEEEe-CCCCEEEEEEecCCCCCChHHHHHHHhh
Q 043043          105 NFDRKLVMGKGAFGNVYRGTL-RNSMKVAVKRGETGSGQGLPEFQTAIIV  153 (154)
Q Consensus       105 ~f~~~~~iG~g~~g~vy~g~l-~~g~~vaVK~l~~~~~~~~~~f~~e~~~  153 (154)
                      +|.....||+|+||.||++.- .++..||+|.+.... .....+.+|+.+
T Consensus        20 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~   68 (373)
T 1q8y_A           20 RYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK-VYTEAAEDEIKL   68 (373)
T ss_dssp             TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHH
T ss_pred             eEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCCc-cchhhhhHHHHH
Confidence            456667899999999999986 467899999985321 123456666643

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=96.20  E-value=0.0024  Score=46.53  Aligned_cols=48  Identities=25%  Similarity=0.403  Sum_probs=31.3

Q ss_pred             CccccceeecCCCcceEEEEeC-CCC----EEEEEEecCCC-CCChHHHHHHHh
Q 043043          105 NFDRKLVMGKGAFGNVYRGTLR-NSM----KVAVKRGETGS-GQGLPEFQTAII  152 (154)
Q Consensus       105 ~f~~~~~iG~g~~g~vy~g~l~-~g~----~vaVK~l~~~~-~~~~~~f~~e~~  152 (154)
                      +|.....||+|+||.||++... ++.    .|++|.+.... ......|.+|+.
T Consensus        14 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~   67 (325)
T 3kex_A           14 ELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHML   67 (325)
T ss_dssp             TEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHH
T ss_pred             HceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHH
Confidence            3555678999999999999864 343    38888885332 222334555553

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=96.19  E-value=0.0033  Score=45.72  Aligned_cols=49  Identities=24%  Similarity=0.481  Sum_probs=33.2

Q ss_pred             CccccceeecCCCcceEEEEeC-CCCE--EEEEEecCC-CCCChHHHHHHHhh
Q 043043          105 NFDRKLVMGKGAFGNVYRGTLR-NSMK--VAVKRGETG-SGQGLPEFQTAIIV  153 (154)
Q Consensus       105 ~f~~~~~iG~g~~g~vy~g~l~-~g~~--vaVK~l~~~-~~~~~~~f~~e~~~  153 (154)
                      +|.....||+|+||.||++... ++..  +++|.+... .......|.+|+++
T Consensus        26 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~   78 (327)
T 1fvr_A           26 DIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEV   78 (327)
T ss_dssp             GCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHH
T ss_pred             HccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHH
Confidence            4556678999999999999874 4444  599998643 23344568888765

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=96.14  E-value=0.0034  Score=50.71  Aligned_cols=50  Identities=24%  Similarity=0.290  Sum_probs=35.2

Q ss_pred             cCccccceeecCCCcceEEEEeC-CCCEEEEEEecCC---CCCChHHHHHHHhh
Q 043043          104 HNFDRKLVMGKGAFGNVYRGTLR-NSMKVAVKRGETG---SGQGLPEFQTAIIV  153 (154)
Q Consensus       104 ~~f~~~~~iG~g~~g~vy~g~l~-~g~~vaVK~l~~~---~~~~~~~f~~e~~~  153 (154)
                      .+|...++||+|+||.||++... ++..||||.+...   .......+..|..+
T Consensus       341 ~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~  394 (674)
T 3pfq_A          341 TDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRV  394 (674)
T ss_dssp             TTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHH
T ss_pred             cceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHH
Confidence            45666678999999999999975 5678999998521   22233455566543

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=96.06  E-value=0.0031  Score=45.12  Aligned_cols=49  Identities=16%  Similarity=0.153  Sum_probs=35.1

Q ss_pred             CccccceeecCCCcceEEEEeC-CCCEEEEEEecCCCC---CChHHHHHHHhh
Q 043043          105 NFDRKLVMGKGAFGNVYRGTLR-NSMKVAVKRGETGSG---QGLPEFQTAIIV  153 (154)
Q Consensus       105 ~f~~~~~iG~g~~g~vy~g~l~-~g~~vaVK~l~~~~~---~~~~~f~~e~~~  153 (154)
                      +|.....||+|+||.||++... ++..+|+|.+.....   .....|.+|+.+
T Consensus        16 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~   68 (294)
T 2rku_A           16 RYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISI   68 (294)
T ss_dssp             EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHH
T ss_pred             ceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHH
Confidence            3555678999999999999985 467899999853321   123457777754

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=96.01  E-value=0.0034  Score=44.60  Aligned_cols=35  Identities=26%  Similarity=0.408  Sum_probs=28.7

Q ss_pred             cCccccceeecCCCcceEEEEe-CCCCEEEEEEecC
Q 043043          104 HNFDRKLVMGKGAFGNVYRGTL-RNSMKVAVKRGET  138 (154)
Q Consensus       104 ~~f~~~~~iG~g~~g~vy~g~l-~~g~~vaVK~l~~  138 (154)
                      ++|.....||+|+||.||++.. .++..||+|.+..
T Consensus         7 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~   42 (290)
T 3fme_A            7 DDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRA   42 (290)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC-
T ss_pred             HhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeec
Confidence            3466668899999999999987 4678999999954

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=96.00  E-value=0.005  Score=49.88  Aligned_cols=34  Identities=26%  Similarity=0.485  Sum_probs=28.5

Q ss_pred             cCccccceeecCCCcceEEEEeC-CCCEEEEEEec
Q 043043          104 HNFDRKLVMGKGAFGNVYRGTLR-NSMKVAVKRGE  137 (154)
Q Consensus       104 ~~f~~~~~iG~g~~g~vy~g~l~-~g~~vaVK~l~  137 (154)
                      ++|...++||+|+||.||++.-. +|..+|+|.+.
T Consensus       189 ddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~  223 (689)
T 3v5w_A          189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLD  223 (689)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEE
T ss_pred             HHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEe
Confidence            34666678999999999999874 58899999994

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=95.92  E-value=0.0033  Score=45.39  Aligned_cols=50  Identities=24%  Similarity=0.503  Sum_probs=34.3

Q ss_pred             hhcCccccceeecCCCcceEEEEeCCCCEEEEEEecCC--CCCChHHHHHHHhh
Q 043043          102 ATHNFDRKLVMGKGAFGNVYRGTLRNSMKVAVKRGETG--SGQGLPEFQTAIIV  153 (154)
Q Consensus       102 at~~f~~~~~iG~g~~g~vy~g~l~~g~~vaVK~l~~~--~~~~~~~f~~e~~~  153 (154)
                      ...+|.....||+|+||.||++...+  .+|+|.+...  .......|.+|+.+
T Consensus        31 ~~~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~   82 (319)
T 2y4i_B           31 PFEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMA   82 (319)
T ss_dssp             CCSCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGG
T ss_pred             CHHHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHH
Confidence            34566677889999999999999864  4999998532  22223445556543

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=95.91  E-value=0.0038  Score=45.70  Aligned_cols=50  Identities=16%  Similarity=0.154  Sum_probs=35.8

Q ss_pred             cCccccceeecCCCcceEEEEeC-CCCEEEEEEecCCCC---CChHHHHHHHhh
Q 043043          104 HNFDRKLVMGKGAFGNVYRGTLR-NSMKVAVKRGETGSG---QGLPEFQTAIIV  153 (154)
Q Consensus       104 ~~f~~~~~iG~g~~g~vy~g~l~-~g~~vaVK~l~~~~~---~~~~~f~~e~~~  153 (154)
                      .+|...+.||+|+||.||++... ++..+|+|.+.....   .....|.+|+.+
T Consensus        41 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~   94 (335)
T 2owb_A           41 RRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISI   94 (335)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHH
T ss_pred             CceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHH
Confidence            34556688999999999999875 467899999853221   223567777754

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=95.91  E-value=0.0083  Score=45.21  Aligned_cols=38  Identities=24%  Similarity=0.254  Sum_probs=29.4

Q ss_pred             ceeecCCCcceEEEEeC-CCCEEEEEEecCCCCCChHHHHHHHh
Q 043043          110 LVMGKGAFGNVYRGTLR-NSMKVAVKRGETGSGQGLPEFQTAII  152 (154)
Q Consensus       110 ~~iG~g~~g~vy~g~l~-~g~~vaVK~l~~~~~~~~~~f~~e~~  152 (154)
                      ++||+|+||.||++.-. ++..||+|.+..     ...+.+|++
T Consensus        68 ~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~-----~~~~~~E~~  106 (400)
T 1nxk_A           68 QVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVE  106 (400)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHH
T ss_pred             ceeeeccCeEEEEEEECCCCCEEEEEEeCc-----chhHHHHHH
Confidence            57999999999999874 578999999953     234555654

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=95.91  E-value=0.0032  Score=46.01  Aligned_cols=49  Identities=20%  Similarity=0.177  Sum_probs=34.1

Q ss_pred             cCccccceeecCCCcceEEEEeC-C-CCEEEEEEecCCCCCChHHHHHHHhh
Q 043043          104 HNFDRKLVMGKGAFGNVYRGTLR-N-SMKVAVKRGETGSGQGLPEFQTAIIV  153 (154)
Q Consensus       104 ~~f~~~~~iG~g~~g~vy~g~l~-~-g~~vaVK~l~~~~~~~~~~f~~e~~~  153 (154)
                      ++|.....||+|+||.||++.-. + +..||+|.+.... .....+.+|+.+
T Consensus        19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~   69 (355)
T 2eu9_A           19 ERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVG-KYREAARLEINV   69 (355)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSCH-HHHHHHHHHHHH
T ss_pred             ccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEcccc-cchhHHHHHHHH
Confidence            34666688999999999999864 3 3689999995321 123456666653

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=95.89  E-value=0.0024  Score=48.97  Aligned_cols=49  Identities=18%  Similarity=0.131  Sum_probs=34.0

Q ss_pred             CccccceeecCCCcceEEEEe-CCCCEEEEEEecCCCC--CChHHHHHHHhh
Q 043043          105 NFDRKLVMGKGAFGNVYRGTL-RNSMKVAVKRGETGSG--QGLPEFQTAIIV  153 (154)
Q Consensus       105 ~f~~~~~iG~g~~g~vy~g~l-~~g~~vaVK~l~~~~~--~~~~~f~~e~~~  153 (154)
                      .|.....||+|+||.||++.- .+|..+|+|.+.....  .....+.+|+++
T Consensus        12 ~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~i   63 (444)
T 3soa_A           12 EYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARI   63 (444)
T ss_dssp             HEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHH
T ss_pred             CeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHH
Confidence            356667899999999999975 4678999999964321  123457788765

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=95.81  E-value=0.005  Score=49.57  Aligned_cols=50  Identities=22%  Similarity=0.392  Sum_probs=35.7

Q ss_pred             cCccccceeecCCCcceEEEEeCC----CCEEEEEEecCCCC-CChHHHHHHHhh
Q 043043          104 HNFDRKLVMGKGAFGNVYRGTLRN----SMKVAVKRGETGSG-QGLPEFQTAIIV  153 (154)
Q Consensus       104 ~~f~~~~~iG~g~~g~vy~g~l~~----g~~vaVK~l~~~~~-~~~~~f~~e~~~  153 (154)
                      .+|...+.||+|+||.||+|....    +..||+|.+..... .....|.+|+.+
T Consensus       390 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~  444 (656)
T 2j0j_A          390 ERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALT  444 (656)
T ss_dssp             GGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHH
T ss_pred             ccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHH
Confidence            445666789999999999998742    45799999864322 223568888765

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=95.80  E-value=0.0046  Score=44.56  Aligned_cols=36  Identities=25%  Similarity=0.432  Sum_probs=23.7

Q ss_pred             cCccccceeecCCCcceEEEEeC-CCCEEEEEEecCC
Q 043043          104 HNFDRKLVMGKGAFGNVYRGTLR-NSMKVAVKRGETG  139 (154)
Q Consensus       104 ~~f~~~~~iG~g~~g~vy~g~l~-~g~~vaVK~l~~~  139 (154)
                      ++|.....||+|+||.||++... +|..||+|.+...
T Consensus        25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~   61 (318)
T 2dyl_A           25 NDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRS   61 (318)
T ss_dssp             GGEEEEEEC------CEEEEEETTTCCEEEEEEEETT
T ss_pred             ccccccceeeecCCeeEEEEEEecCCeEEEEEEeccc
Confidence            34566678999999999999985 6889999999643

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=95.71  E-value=0.012  Score=42.23  Aligned_cols=38  Identities=26%  Similarity=0.272  Sum_probs=29.6

Q ss_pred             ceeecCCCcceEEEEe-CCCCEEEEEEecCCCCCChHHHHHHHh
Q 043043          110 LVMGKGAFGNVYRGTL-RNSMKVAVKRGETGSGQGLPEFQTAII  152 (154)
Q Consensus       110 ~~iG~g~~g~vy~g~l-~~g~~vaVK~l~~~~~~~~~~f~~e~~  152 (154)
                      ++||+|+||.||++.- .++..||+|.+..     ...+.+|++
T Consensus        24 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~-----~~~~~~e~~   62 (299)
T 3m2w_A           24 QVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVE   62 (299)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHH
T ss_pred             cccccCCCeEEEEEEEcCCCcEEEEEEecc-----cHHHHHHHH
Confidence            6799999999999987 4678999999953     234555654

>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A

Probab=95.50  E-value=0.012  Score=44.58  Aligned_cols=31  Identities=10%  Similarity=0.014  Sum_probs=27.2

Q ss_pred             cccceeecCCCcceEEEEeCCCCEEEEEEec
Q 043043          107 DRKLVMGKGAFGNVYRGTLRNSMKVAVKRGE  137 (154)
Q Consensus       107 ~~~~~iG~g~~g~vy~g~l~~g~~vaVK~l~  137 (154)
                      .-...||.|++|.||++.-++|..||||.+.
T Consensus        98 ~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r  128 (397)
T 4gyi_A           98 SVGSRIGVGKESDIMIVADEKGKQKVLKIHR  128 (397)
T ss_dssp             EEEEEEEECSSEEEEEEECTTCCEEEEEEEC
T ss_pred             EecCEeeeCCceEEEEEECCCCCEEEEEEEe
Confidence            3446799999999999999999999999874

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=95.47  E-value=0.013  Score=44.04  Aligned_cols=33  Identities=33%  Similarity=0.561  Sum_probs=27.8

Q ss_pred             ccccceeecCCCcceEEEEeCCCCEEEEEEecC
Q 043043          106 FDRKLVMGKGAFGNVYRGTLRNSMKVAVKRGET  138 (154)
Q Consensus       106 f~~~~~iG~g~~g~vy~g~l~~g~~vaVK~l~~  138 (154)
                      |...++||+|+||.||++...++..+|+|++..
T Consensus        42 Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~   74 (394)
T 4e7w_A           42 YTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQ   74 (394)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTTEEEEEEEEEC
T ss_pred             EEEeEEEeeCCCeEEEEEEECCCCeEEEEEEec
Confidence            555678999999999999997777799998853

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=95.37  E-value=0.0026  Score=51.50  Aligned_cols=50  Identities=24%  Similarity=0.320  Sum_probs=35.7

Q ss_pred             cCccccceeecCCCcceEEEEe-CCCCEEEEEEecCC-CCCChHHHHHHHhh
Q 043043          104 HNFDRKLVMGKGAFGNVYRGTL-RNSMKVAVKRGETG-SGQGLPEFQTAIIV  153 (154)
Q Consensus       104 ~~f~~~~~iG~g~~g~vy~g~l-~~g~~vaVK~l~~~-~~~~~~~f~~e~~~  153 (154)
                      ++|.....||+|+||.||++.. .+|..||||.+... .......|.+|+++
T Consensus        14 grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~i   65 (676)
T 3qa8_A           14 GPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQI   65 (676)
T ss_dssp             ---CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHH
T ss_pred             CCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHH
Confidence            4566778899999999999987 45789999998543 22223568888765

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=95.34  E-value=0.0068  Score=44.52  Aligned_cols=35  Identities=20%  Similarity=0.282  Sum_probs=22.6

Q ss_pred             cCccccceeecCCCcceEEEEeC----CCCEEEEEEecC
Q 043043          104 HNFDRKLVMGKGAFGNVYRGTLR----NSMKVAVKRGET  138 (154)
Q Consensus       104 ~~f~~~~~iG~g~~g~vy~g~l~----~g~~vaVK~l~~  138 (154)
                      ++|...+.||+|+||.||++...    .+..+|+|....
T Consensus        37 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~   75 (345)
T 2v62_A           37 NQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQ   75 (345)
T ss_dssp             CEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEEC
T ss_pred             ceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeec
Confidence            34566678999999999999985    467899999864

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=95.29  E-value=0.019  Score=42.29  Aligned_cols=35  Identities=23%  Similarity=0.337  Sum_probs=28.8

Q ss_pred             CccccceeecCCCcceEEEEeC-CCCEEEEEEecCC
Q 043043          105 NFDRKLVMGKGAFGNVYRGTLR-NSMKVAVKRGETG  139 (154)
Q Consensus       105 ~f~~~~~iG~g~~g~vy~g~l~-~g~~vaVK~l~~~  139 (154)
                      +|.....||+|+||.||++.-. ++..+|+|.+...
T Consensus        23 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~   58 (342)
T 2qr7_A           23 GYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKS   58 (342)
T ss_dssp             HEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETT
T ss_pred             cEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcc
Confidence            3556678999999999999875 5788999999643

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=95.22  E-value=0.016  Score=42.40  Aligned_cols=34  Identities=29%  Similarity=0.324  Sum_probs=27.4

Q ss_pred             Cccc-cceeecCCCcceEEEEeC-CCCEEEEEEecC
Q 043043          105 NFDR-KLVMGKGAFGNVYRGTLR-NSMKVAVKRGET  138 (154)
Q Consensus       105 ~f~~-~~~iG~g~~g~vy~g~l~-~g~~vaVK~l~~  138 (154)
                      +|.. .++||+|+||.||++... ++..||+|.+..
T Consensus        29 ~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~   64 (336)
T 3fhr_A           29 DYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYD   64 (336)
T ss_dssp             TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEES
T ss_pred             eeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecC
Confidence            3444 357999999999999885 688999999853

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=94.23  E-value=0.057  Score=42.42  Aligned_cols=45  Identities=16%  Similarity=0.168  Sum_probs=24.9

Q ss_pred             ccceeecCCCcceEEEEeCCCCEEEEEEecCCCCCC--------hHHHHHHHhh
Q 043043          108 RKLVMGKGAFGNVYRGTLRNSMKVAVKRGETGSGQG--------LPEFQTAIIV  153 (154)
Q Consensus       108 ~~~~iG~g~~g~vy~g~l~~g~~vaVK~l~~~~~~~--------~~~f~~e~~~  153 (154)
                      ..++||+|+||.||++.. .+..+++|+........        .+.|.+|+++
T Consensus       340 ~~~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~i  392 (540)
T 3en9_A          340 PEHLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARY  392 (540)
T ss_dssp             --------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHH
T ss_pred             CCCEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHH
Confidence            356899999999999965 46789999874322111        1236777765

>1iij_A ERBB-2 receptor protein-tyrosine kinase; alpha-helix-PI-bulge-alpha-helix, signaling protein; NMR {Synthetic} SCOP: j.35.1.1

Probab=93.06  E-value=0.0034  Score=30.41  Aligned_cols=25  Identities=24%  Similarity=0.529  Sum_probs=10.6

Q ss_pred             EEehhHHHHHHHHHHHHHHHHHHHHh
Q 043043           24 VVGSVLACSVLICILEIVLSFVLIWR   49 (154)
Q Consensus        24 ii~~~v~~~vll~i~~~~~~~~~~~r   49 (154)
                      +++.++| +++++++++.+.++.|||
T Consensus        10 IaagVvg-lll~vii~l~~~~~iRRr   34 (35)
T 1iij_A           10 IIATVVG-VLLFLILVVVVGILIKRR   34 (35)
T ss_dssp             HHHHHHH-HHHHHHHTTTTTHHHHHC
T ss_pred             eHHHHHH-HHHHHHHHHHhheEEeec
Confidence            3333444 444444444444444443

>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}

Probab=91.46  E-value=0.28  Score=34.91  Aligned_cols=48  Identities=15%  Similarity=0.032  Sum_probs=35.6

Q ss_pred             ccccceeecCCCcceEEEEeCCCCEEEEEEecCCCCCChHHHHHHHhh
Q 043043          106 FDRKLVMGKGAFGNVYRGTLRNSMKVAVKRGETGSGQGLPEFQTAIIV  153 (154)
Q Consensus       106 f~~~~~iG~g~~g~vy~g~l~~g~~vaVK~l~~~~~~~~~~f~~e~~~  153 (154)
                      +....-+|.|..+.||+-.+.||+.+.+|+-..........|..|.+.
T Consensus        17 v~~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~   64 (288)
T 3f7w_A           17 VAAVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALG   64 (288)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHH
T ss_pred             eEEEEecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHH
Confidence            444556899999999999999999999998754333334457777654

>2l8s_A Integrin alpha-1; transmembrane region, detergent micelle, CE adhesion; NMR {Homo sapiens}

Probab=90.22  E-value=0.19  Score=26.67  Aligned_cols=24  Identities=21%  Similarity=0.258  Sum_probs=11.2

Q ss_pred             ceeEEEehhHHHHHHHHHHHHHHH
Q 043043           20 HFMAVVGSVLACSVLICILEIVLS   43 (154)
Q Consensus        20 ~~~~ii~~~v~~~vll~i~~~~~~   43 (154)
                      ..++|+..++++++++.+++++++
T Consensus         8 p~WiIi~svl~GLLLL~Lii~~Lw   31 (54)
T 2l8s_A            8 PLWVILLSAFAGLLLLMLLILALW   31 (54)
T ss_dssp             CTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHH
Confidence            344444445554554444444444

>2klu_A T-cell surface glycoprotein CD4; cell membrane, disulfide bond, HOST- virus interaction, immune response, immunoglobulin domain, lipoprotein; NMR {Homo sapiens}

Probab=88.73  E-value=0.65  Score=25.62  Aligned_cols=20  Identities=20%  Similarity=0.315  Sum_probs=8.9

Q ss_pred             hhHHHHH-HHHHHHHHHHHHH
Q 043043           27 SVLACSV-LICILEIVLSFVL   46 (154)
Q Consensus        27 ~~v~~~v-ll~i~~~~~~~~~   46 (154)
                      +++|+++ +++++.++++|+.
T Consensus        12 ivlGg~~~lll~~glcI~ccv   32 (70)
T 2klu_A           12 IVLGGVAGLLLFIGLGIFFSV   32 (70)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHhHHHHHHHHHHHHHHHhh
Confidence            3444444 4444444455443

>2knc_A Integrin alpha-IIB; transmembrane signaling, protein structure, cell A cleavage on PAIR of basic residues, disease mutation, disul bond, glycoprotein; NMR {Homo sapiens}

Probab=88.17  E-value=0.36  Score=25.70  Aligned_cols=25  Identities=24%  Similarity=0.214  Sum_probs=12.1

Q ss_pred             cceeEEEehhHHHHHHHHHHHHHHH
Q 043043           19 KHFMAVVGSVLACSVLICILEIVLS   43 (154)
Q Consensus        19 ~~~~~ii~~~v~~~vll~i~~~~~~   43 (154)
                      ...++|+..++++++++.+++++++
T Consensus        10 vp~wiIi~svl~GLllL~li~~~Lw   34 (54)
T 2knc_A           10 IPIWWVLVGVLGGLLLLTILVLAMW   34 (54)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cchHHHHHHHHHHHHHHHHHHHHHH
Confidence            3445555445555555544444444

>1q55_A EP-cadherin, C-cadherin; trans interaction, desmosome, junction, adhesion, structural protein; HET: NAG NDG; 30.00A {Mus musculus} SCOP: i.20.1.1 PDB: 1q5a_A* 1q5b_A* 1q5c_A*

Probab=83.86  E-value=0.21  Score=41.70  Aligned_cols=25  Identities=12%  Similarity=0.224  Sum_probs=0.0

Q ss_pred             ceeEEEehhHHHHHHHHHHHHHHHH
Q 043043           20 HFMAVVGSVLACSVLICILEIVLSF   44 (154)
Q Consensus        20 ~~~~ii~~~v~~~vll~i~~~~~~~   44 (154)
                      ..+.+++++++++++++++++++++
T Consensus       703 ~~~aii~il~~~~~ll~~~ll~~~~  727 (880)
T 1q55_A          703 DLPIILVILGSVLALLILFLLLLLF  727 (880)
T ss_dssp             -------------------------
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            4445555555555544444443333

>2l34_A TYRO protein tyrosine kinase-binding protein; immunoreceptor, transmembrane assembly, DAP12, protein bindi; NMR {Homo sapiens} PDB: 2l35_B

Probab=81.49  E-value=0.4  Score=22.78  Aligned_cols=22  Identities=23%  Similarity=0.446  Sum_probs=11.3

Q ss_pred             EEEehhHHHHHHHHHHHHHHHH
Q 043043           23 AVVGSVLACSVLICILEIVLSF   44 (154)
Q Consensus        23 ~ii~~~v~~~vll~i~~~~~~~   44 (154)
                      .+++++++.++..+++++.+++
T Consensus         8 aIaGIVvgdi~~t~~i~~~vy~   29 (33)
T 2l34_A            8 VLAGIVVGDLVLTVLIALAVYF   29 (33)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHH
T ss_pred             eEEeEeHHHHHHHHHHHHHHhh
Confidence            3455666655555544444444

>2k1a_A Integrin alpha-IIB; single-PASS transmembrane segment, alternative splicing, calcium, cell adhesion, cleavage on PAIR of basic residues; NMR {Homo sapiens} PDB: 2k9j_A

Probab=80.12  E-value=0.44  Score=23.95  Aligned_cols=23  Identities=26%  Similarity=0.310  Sum_probs=9.6

Q ss_pred             ceeEEEehhHHHHHHHHHHHHHH
Q 043043           20 HFMAVVGSVLACSVLICILEIVL   42 (154)
Q Consensus        20 ~~~~ii~~~v~~~vll~i~~~~~   42 (154)
                      ..++++..++++++++.+++.++
T Consensus         9 p~wiIi~s~l~GLllL~li~~~L   31 (42)
T 2k1a_A            9 PIWWVLVGVLGGLLLLTILVLAM   31 (42)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             chHHHHHHHHHHHHHHHHHHHHH
Confidence            34444444444444444333333

>2llm_A Amyloid beta A4 protein; alzheimer'S disease, protein fibril; NMR {Homo sapiens} PDB: 2loh_A

Probab=81.17  E-value=0.35  Score=24.25  Aligned_cols=26  Identities=19%  Similarity=0.356  Sum_probs=12.6

Q ss_pred             ceeEEEehhHHHHHHHHHHHHHHHHH
Q 043043           20 HFMAVVGSVLACSVLICILEIVLSFV   45 (154)
Q Consensus        20 ~~~~ii~~~v~~~vll~i~~~~~~~~   45 (154)
                      ....++++.++++++..++++.++..
T Consensus        15 srga~iGL~v~gVai~~vIVvsl~ml   40 (43)
T 2llm_A           15 NKGAIIGLMVGGVVIATVIVITLVML   40 (43)
Confidence            44556666555554444444433333

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	154
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	1e-06
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	2e-06
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	4e-06
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	5e-06
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	2e-05
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	2e-05
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	2e-05
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	3e-05
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	6e-05
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	8e-05
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	1e-04
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	1e-04
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	1e-04
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	4e-04
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	5e-04
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	5e-04
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	5e-04
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	6e-04
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	6e-04
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	6e-04
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	7e-04
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	7e-04
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	7e-04
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	9e-04
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	0.001
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	0.001
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	0.001
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	0.001
d1zara2	191	d.144.1.9 (A:91-281) Rio2 serine protein kinase C-	0.002
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	0.002
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	0.003
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	0.003
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	0.003
d1ywna1	299	d.144.1.7 (A:818-1166) Vascular endothelial growth	0.003
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	0.004
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	0.004
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	0.004
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	0.004
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	0.004
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	0.004
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	0.004

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.7 bits (105), Expect = 1e-06
 Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 2/38 (5%)

Query: 98  EIKFATHNFDRKLVMGKGAFGNVYRGTLRNSMKVAVKR 135
           EI   +   + KL  G+G FG V+ GT   + +VA+K 
Sbjct: 13  EIPRESLRLEVKL--GQGCFGEVWMGTWNGTTRVAIKT 48

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 44.0 bits (103), Expect = 2e-06
 Identities = 16/73 (21%), Positives = 32/73 (43%), Gaps = 14/73 (19%)

Query: 96  YVEIKFATHNFDRKL---------VMGKGAFGNVYRGTLRNSMK----VAVKRGETG-SG 141
           + +   A   F +++         V+G G FG V  G L+   K    VA+K  ++G + 
Sbjct: 9   FEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTE 68

Query: 142 QGLPEFQTAIIVL 154
           +   +F +   ++
Sbjct: 69  KQRRDFLSEASIM 81

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.7 bits (100), Expect = 4e-06
 Identities = 14/38 (36%), Positives = 17/38 (44%), Gaps = 2/38 (5%)

Query: 98  EIKFATHNFDRKLVMGKGAFGNVYRGTLRNSMKVAVKR 135
           E+   T     +L  G G FG V+ G      KVAVK 
Sbjct: 9   EVPRETLKLVERL--GAGQFGEVWMGYYNGHTKVAVKS 44

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.6 bits (100), Expect = 5e-06
 Identities = 15/57 (26%), Positives = 25/57 (43%), Gaps = 2/57 (3%)

Query: 98  EIKFATHNFDRKLVMGKGAFGNVYRGTLRNSMKVAVKRGETGSGQGLPEFQTAIIVL 154
           EI        +++  G G+FG VY+G     + V +      + Q L  F+  + VL
Sbjct: 4   EIPDGQITVGQRI--GSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVL 58

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.8 bits (95), Expect = 2e-05
 Identities = 12/31 (38%), Positives = 17/31 (54%), Gaps = 2/31 (6%)

Query: 105 NFDRKLVMGKGAFGNVYRGTLRNSMKVAVKR 135
            F +++  G G FG V+ G   N  KVA+K 
Sbjct: 8   TFVQEI--GSGQFGLVHLGYWLNKDKVAIKT 36

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.8 bits (95), Expect = 2e-05
 Identities = 10/31 (32%), Positives = 13/31 (41%)

Query: 105 NFDRKLVMGKGAFGNVYRGTLRNSMKVAVKR 135
           +      +G G FG V  G  R    VA+K 
Sbjct: 5   DLTFLKELGTGQFGVVKYGKWRGQYDVAIKM 35

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.5 bits (94), Expect = 2e-05
 Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 7/55 (12%)

Query: 105 NFDRKLVMGKGAFGNVYRGTLRNS----MKVAVKRGETGSGQG-LPEFQTAIIVL 154
           +F+  +  G+G FG VY GTL ++    +  AVK     +  G + +F T  I++
Sbjct: 30  HFNEVI--GRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIM 82

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 40.5 bits (94), Expect = 3e-05
 Identities = 13/39 (33%), Positives = 18/39 (46%), Gaps = 3/39 (7%)

Query: 98  EIKFATHNFDRKLVMGKGAFGNVYRGTLRNS-MKVAVKR 135
           E++        KL  G G +G VY G  +   + VAVK 
Sbjct: 13  EMERTDITMKHKL--GGGQYGEVYEGVWKKYSLTVAVKT 49

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.4 bits (91), Expect = 6e-05
 Identities = 16/63 (25%), Positives = 29/63 (46%), Gaps = 6/63 (9%)

Query: 96  YVEIKFATHNFDRKLVMGKGAFGNVYRGTLRNS---MKVAVKR-GETGSGQGLPEFQTAI 151
           Y  + +  ++   + V+G+G FG V +  ++     M  A+KR  E  S     +F   +
Sbjct: 4   YPVLDW--NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGEL 61

Query: 152 IVL 154
            VL
Sbjct: 62  EVL 64

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.0 bits (90), Expect = 8e-05
 Identities = 16/61 (26%), Positives = 28/61 (45%), Gaps = 6/61 (9%)

Query: 100 KFATHNFDRKLVMGKGAFGNVYRGTLRNS-----MKVAVKRGETGSGQG-LPEFQTAIIV 153
           +       R+ V+G G FG VY+G L+ S     + VA+K  + G  +    +F     +
Sbjct: 3   EIHPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGI 62

Query: 154 L 154
           +
Sbjct: 63  M 63

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 38.7 bits (89), Expect = 1e-04
 Identities = 15/66 (22%), Positives = 29/66 (43%), Gaps = 7/66 (10%)

Query: 96  YVEIKFATHNFDRKLVMGKGAFGNVYRGTLRNSM------KVAVKR-GETGSGQGLPEFQ 148
            + +++  +N +    +G+GAFG V++      +       VAVK   E  S     +FQ
Sbjct: 5   LLSLEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQ 64

Query: 149 TAIIVL 154
               ++
Sbjct: 65  REAALM 70

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.6 bits (89), Expect = 1e-04
 Identities = 17/55 (30%), Positives = 24/55 (43%), Gaps = 6/55 (10%)

Query: 106 FDRKLVMGKGAFGNVYRGTLRNS-----MKVAVKR-GETGSGQGLPEFQTAIIVL 154
           F +  V+G GAFG VY+G          + VA+K   E  S +   E      V+
Sbjct: 11  FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 65

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.3 bits (88), Expect = 1e-04
 Identities = 19/64 (29%), Positives = 28/64 (43%), Gaps = 9/64 (14%)

Query: 98  EIKFATHNFDRKLVMGKGAFGNVYRGTLRNSMK------VAVKR-GETGSGQGLPEFQTA 150
           E+        R+L  G+G+FG VY G  +  +K      VA+K   E  S +   EF   
Sbjct: 16  EVAREKITMSREL--GQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 73

Query: 151 IIVL 154
             V+
Sbjct: 74  ASVM 77

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.9 bits (85), Expect = 4e-04
 Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 1/45 (2%)

Query: 111 VMGKGAFGNVYRGTLRNS-MKVAVKRGETGSGQGLPEFQTAIIVL 154
            +G GAFG VY+   + + +  A K  +T S + L ++   I +L
Sbjct: 19  ELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDIL 63

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.5 bits (84), Expect = 5e-04
 Identities = 13/37 (35%), Positives = 21/37 (56%), Gaps = 1/37 (2%)

Query: 100 KFATHNFDRKLVMGKGAFGNVYRGTLRNS-MKVAVKR 135
           ++A  +F+    +GKG FGNVY    + S   +A+K 
Sbjct: 2   QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKV 38

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score = 36.8 bits (84), Expect = 5e-04
 Identities = 7/25 (28%), Positives = 13/25 (52%)

Query: 111 VMGKGAFGNVYRGTLRNSMKVAVKR 135
            +G+G +G VY+         A+K+
Sbjct: 9   KIGEGTYGVVYKAQNNYGETFALKK 33

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.5 bits (84), Expect = 5e-04
 Identities = 13/38 (34%), Positives = 18/38 (47%), Gaps = 3/38 (7%)

Query: 98  EIKFATHNFDRKLVMGKGAFGNVYRGTLRNSMKVAVKR 135
            +        + +  GKG FG+V  G  R + KVAVK 
Sbjct: 3   ALNMKELKLLQTI--GKGEFGDVMLGDYRGN-KVAVKC 37

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.6 bits (84), Expect = 6e-04
 Identities = 15/64 (23%), Positives = 27/64 (42%), Gaps = 9/64 (14%)

Query: 98  EIKFATHNF---DRKLVMGKGAFGNVYRGTLRNS---MKVAVKRGETGSGQG-LPEFQTA 150
           ++     N    D +L  G G FG+V +G  R     + VA+K  + G+ +    E    
Sbjct: 2   KLFLKRDNLLIADIEL--GCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMRE 59

Query: 151 IIVL 154
             ++
Sbjct: 60  AQIM 63

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.5 bits (84), Expect = 6e-04
 Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 7/43 (16%)

Query: 94  IPYVEIKFATHNFDRKLVMGKGAFGNVYRGTLRNS-MKVAVKR 135
           +P+VE      ++D    +G+GA+G V     R +   VAVK 
Sbjct: 1   VPFVE------DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKI 37

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.6 bits (84), Expect = 6e-04
 Identities = 8/38 (21%), Positives = 20/38 (52%), Gaps = 1/38 (2%)

Query: 99  IKFATHNFDRKLVMGKGAFGNVYRGTLRNS-MKVAVKR 135
           ++    +F++   +G G  G V++ + + S + +A K 
Sbjct: 1   MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKL 38

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.1 bits (83), Expect = 7e-04
 Identities = 10/31 (32%), Positives = 18/31 (58%), Gaps = 3/31 (9%)

Query: 106 FDRKLVMGKGAFGNVYRGTLRNS-MKVAVKR 135
           FD ++  G+G+F  VY+G    + ++VA   
Sbjct: 13  FDIEI--GRGSFKTVYKGLDTETTVEVAWCE 41

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.2 bits (83), Expect = 7e-04
 Identities = 15/53 (28%), Positives = 21/53 (39%), Gaps = 7/53 (13%)

Query: 107 DRKLVMGKGAFGNVYRGTLRNS---MKVAVK--RGETGSGQGLPEFQTAIIVL 154
           D++L  G G FG V +G  +       VAVK  + E        E      V+
Sbjct: 12  DKEL--GSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVM 62

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.3 bits (83), Expect = 7e-04
 Identities = 14/62 (22%), Positives = 28/62 (45%), Gaps = 7/62 (11%)

Query: 98  EIKFATHNFDRKLVMGKGAFGNVYRGTLRNS----MKVAVKRGETGSGQGLPE-FQTAII 152
           EI+       R +  G+G FG+V++G   +     + VA+K  +  +   + E F    +
Sbjct: 3   EIQRERIELGRCI--GEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEAL 60

Query: 153 VL 154
            +
Sbjct: 61  TM 62

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.0 bits (82), Expect = 9e-04
 Identities = 13/25 (52%), Positives = 16/25 (64%), Gaps = 1/25 (4%)

Query: 111 VMGKGAFGNVYRGTLRNSMKVAVKR 135
            +GKG FG V+RG  R   +VAVK 
Sbjct: 10  SIGKGRFGEVWRGKWRGE-EVAVKI 33

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 35.9 bits (82), Expect = 0.001
 Identities = 9/32 (28%), Positives = 16/32 (50%), Gaps = 1/32 (3%)

Query: 105 NFDRKLVMGKGAFGNVYRGTLRNS-MKVAVKR 135
           +F    ++G+G FG VY     ++    A+K 
Sbjct: 5   DFSVHRIIGRGGFGEVYGCRKADTGKMYAMKC 36

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.9 bits (82), Expect = 0.001
 Identities = 12/32 (37%), Positives = 20/32 (62%), Gaps = 1/32 (3%)

Query: 105 NFDRKLVMGKGAFGNVYRGTLRNS-MKVAVKR 135
           ++    V+G G+FG VY+  L +S   VA+K+
Sbjct: 21  SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKK 52

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.5 bits (81), Expect = 0.001
 Identities = 16/57 (28%), Positives = 22/57 (38%), Gaps = 17/57 (29%)

Query: 96  YVEIKFATHNFDRKL-----------VMGKGAFGNVYRGTLRNS------MKVAVKR 135
           Y  + F  + +D K            V+G GAFG V   T          ++VAVK 
Sbjct: 18  YFYVDFREYEYDLKWEFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKM 74

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.6 bits (81), Expect = 0.001
 Identities = 15/44 (34%), Positives = 18/44 (40%), Gaps = 8/44 (18%)

Query: 98  EIKFATHNFDRKLVMGKGAFGNVYRGTLR------NSMKVAVKR 135
           E      +F + L  G GAFG V   T         +M VAVK 
Sbjct: 19  EFPRNRLSFGKTL--GAGAFGKVVEATAYGLIKSDAAMTVAVKM 60

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} Length = 191

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

 Score = 35.1 bits (80), Expect = 0.002
 Identities = 6/24 (25%), Positives = 10/24 (41%)

Query: 111 VMGKGAFGNVYRGTLRNSMKVAVK 134
           +MG+G    V+        +  VK
Sbjct: 7   LMGEGKESAVFNCYSEKFGECVVK 30

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.8 bits (79), Expect = 0.002
 Identities = 14/66 (21%), Positives = 24/66 (36%), Gaps = 11/66 (16%)

Query: 98  EIKFATHNFDRKLVMGKGAFGNVYRGTLR--------NSMKVAVKR-GETGSGQGLPEFQ 148
           E+        + L  G+GAFG V                 KVAVK      + + L +  
Sbjct: 9   ELPRDRLVLGKPL--GEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLI 66

Query: 149 TAIIVL 154
           + + ++
Sbjct: 67  SEMEMM 72

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.7 bits (79), Expect = 0.003
 Identities = 9/32 (28%), Positives = 17/32 (53%), Gaps = 1/32 (3%)

Query: 105 NFDRKLVMGKGAFGNVYRGTLRNS-MKVAVKR 135
           +F    ++GKG+FG V+    + +    A+K 
Sbjct: 3   DFILHKMLGKGSFGKVFLAEFKKTNQFFAIKA 34

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.3 bits (78), Expect = 0.003
 Identities = 12/57 (21%), Positives = 22/57 (38%), Gaps = 7/57 (12%)

Query: 105 NFDRKLVMGKGAFGNVYRGTLR----NSMKVAVKR---GETGSGQGLPEFQTAIIVL 154
           +      +G G+FG V RG        ++ VAVK          + + +F   +  +
Sbjct: 9   DLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAM 65

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.4 bits (78), Expect = 0.003
 Identities = 9/26 (34%), Positives = 16/26 (61%), Gaps = 1/26 (3%)

Query: 111 VMGKGAFGNVYRGTLRNS-MKVAVKR 135
            +G+G F  VY+   +N+   VA+K+
Sbjct: 5   FLGEGQFATVYKARDKNTNQIVAIKK 30

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.5 bits (78), Expect = 0.003
 Identities = 17/72 (23%), Positives = 25/72 (34%), Gaps = 13/72 (18%)

Query: 94  IPYV----EIKFATHNFDRKLVMGKGAFGNVYRGTLRNSMK------VAVKRGETGSGQG 143
           +PY     E         + L  G+GAFG V         K      VAVK  + G+   
Sbjct: 1   LPYDASKWEFPRDRLKLGKPL--GRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHS 58

Query: 144 -LPEFQTAIIVL 154
                 + + +L
Sbjct: 59  EHRALMSELKIL 70

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.4 bits (78), Expect = 0.004
 Identities = 11/37 (29%), Positives = 18/37 (48%), Gaps = 1/37 (2%)

Query: 100 KFATHNFDRKLVMGKGAFGNVYRGTLRNS-MKVAVKR 135
           K   ++FD   ++GKG FG V     + +    A+K 
Sbjct: 1   KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKI 37

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.1 bits (77), Expect = 0.004
 Identities = 10/32 (31%), Positives = 18/32 (56%), Gaps = 1/32 (3%)

Query: 105 NFDRKLVMGKGAFGNVYRGTLR-NSMKVAVKR 135
           NF +   +G+G +G VY+   +     VA+K+
Sbjct: 3   NFQKVEKIGEGTYGVVYKARNKLTGEVVALKK 34

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.1 bits (77), Expect = 0.004
 Identities = 10/32 (31%), Positives = 20/32 (62%), Gaps = 1/32 (3%)

Query: 105 NFDRKLVMGKGAFGNVYRGTLRNS-MKVAVKR 135
            +++   +G+G FG V++   R +  KVA+K+
Sbjct: 11  KYEKLAKIGQGTFGEVFKARHRKTGQKVALKK 42

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score = 34.3 bits (78), Expect = 0.004
 Identities = 14/51 (27%), Positives = 21/51 (41%), Gaps = 1/51 (1%)

Query: 105 NFDRKLVMGKGAFGNVYRGTLRNS-MKVAVKRGETGSGQGLPEFQTAIIVL 154
           ++D    +G GAFG V+R T R +    A K   T         +  I  +
Sbjct: 27  HYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTM 77

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.2 bits (78), Expect = 0.004
 Identities = 10/45 (22%), Positives = 19/45 (42%), Gaps = 1/45 (2%)

Query: 111 VMGKGAFGNVYRGT-LRNSMKVAVKRGETGSGQGLPEFQTAIIVL 154
            +G+GA G VY    +    +VA+++               I+V+
Sbjct: 27  KIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVM 71

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 34.2 bits (78), Expect = 0.004
 Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 1/31 (3%)

Query: 106 FDRKLVMGKGAFGNVYRGT-LRNSMKVAVKR 135
           F     +G G+FG VY    +RNS  VA+K+
Sbjct: 17  FSDLREIGHGSFGAVYFARDVRNSEVVAIKK 47

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 33.9 bits (77), Expect = 0.004
 Identities = 9/32 (28%), Positives = 17/32 (53%), Gaps = 1/32 (3%)

Query: 105 NFDRKLVMGKGAFGNVYRGTLRNS-MKVAVKR 135
           N++ K ++G+G    V R   + +  + AVK 
Sbjct: 4   NYEPKEILGRGVSSVVRRCIHKPTCKEYAVKI 35

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	154
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	98.49
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	98.43
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	98.41
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	98.4
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	98.34
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	98.25
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	98.21
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	98.2
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	98.18
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	98.08
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	98.03
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	98.01
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	98.01
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	98.0
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	98.0
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	97.98
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	97.95
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	97.95
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	97.94
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	97.94
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	97.92
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	97.91
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	97.89
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	97.88
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	97.85
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	97.85
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	97.8
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	97.78
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	97.77
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	97.76
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	97.75
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	97.74
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	97.73
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	97.72
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	97.69
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	97.66
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	97.65
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	97.62
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	97.61
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	97.6
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	97.6
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	97.59
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	97.59
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	97.58
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	97.57
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	97.54
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	97.54
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	97.52
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	97.51
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	97.48
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	97.47
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	97.43
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	97.38
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	97.35
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	97.31
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	97.27
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	97.25
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	97.21
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	97.17
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	97.15
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	97.06

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.49  E-value=6e-08  Score=67.87  Aligned_cols=50  Identities=28%  Similarity=0.373  Sum_probs=40.7

Q ss_pred             cCccccceeecCCCcceEEEEeCCCCEEEEEEecCCCCCChHHHHHHHhhC
Q 043043          104 HNFDRKLVMGKGAFGNVYRGTLRNSMKVAVKRGETGSGQGLPEFQTAIIVL  154 (154)
Q Consensus       104 ~~f~~~~~iG~g~~g~vy~g~l~~g~~vaVK~l~~~~~~~~~~f~~e~~~l  154 (154)
                      ++|...+.||+|+||+||+|+.+++..||||.+... ....++|.+|+.++
T Consensus         4 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~-~~~~~~~~~Ev~~~   53 (258)
T d1k2pa_           4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEG-SMSEDEFIEEAKVM   53 (258)
T ss_dssp             CCCCCCCCCCEETTEEEEEEEETTTEEEEEEEEESS-SSCHHHHHHHHHHH
T ss_pred             HHCEEeEEEecCCCeEEEEEEECCCCEEEEEEECcC-cCCHHHHHHHHHHH
Confidence            356666789999999999999988889999999643 33467899998753

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.43  E-value=3.4e-08  Score=69.61  Aligned_cols=50  Identities=26%  Similarity=0.385  Sum_probs=40.2

Q ss_pred             cCccccceeecCCCcceEEEEeCCCCEEEEEEecCCCCCChHHHHHHHhhC
Q 043043          104 HNFDRKLVMGKGAFGNVYRGTLRNSMKVAVKRGETGSGQGLPEFQTAIIVL  154 (154)
Q Consensus       104 ~~f~~~~~iG~g~~g~vy~g~l~~g~~vaVK~l~~~~~~~~~~f~~e~~~l  154 (154)
                      ++|...+.||+|+||.||+|.++++..||||.+... ....++|.+|+++|
T Consensus        13 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~~~~~-~~~~~~~~~E~~~l   62 (272)
T d1qpca_          13 ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQG-SMSPDAFLAEANLM   62 (272)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTT-SSCHHHHHHHHHHH
T ss_pred             HHeEEeEEEecCCCcEEEEEEECCCCEEEEEEEccC-cCCHHHHHHHHHHH
Confidence            345556789999999999999988889999999643 34467899998764

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.41  E-value=1.4e-07  Score=66.06  Aligned_cols=49  Identities=29%  Similarity=0.321  Sum_probs=39.4

Q ss_pred             CccccceeecCCCcceEEEEeCCCCEEEEEEecCCCCCChHHHHHHHhhC
Q 043043          105 NFDRKLVMGKGAFGNVYRGTLRNSMKVAVKRGETGSGQGLPEFQTAIIVL  154 (154)
Q Consensus       105 ~f~~~~~iG~g~~g~vy~g~l~~g~~vaVK~l~~~~~~~~~~f~~e~~~l  154 (154)
                      +|...+.||+|+||+||+|.+.++..||||++... ....++|.+|+++|
T Consensus         6 ~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~-~~~~~~~~~E~~~l   54 (263)
T d1sm2a_           6 ELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREG-AMSEEDFIEEAEVM   54 (263)
T ss_dssp             CEEEEEEEECCSSCCEEEEEETTTEEEEEEECCSS-SSCHHHHHHHHHHH
T ss_pred             HcEEEEEEeeCCCeEEEEEEECCCCEEEEEEECCC-cCcHHHHHHHHHHH
Confidence            34455779999999999999998889999999643 34467899998753

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.40  E-value=4.5e-08  Score=69.89  Aligned_cols=62  Identities=24%  Similarity=0.468  Sum_probs=44.1

Q ss_pred             cccHHHHHHhhcCccc---------cceeecCCCcceEEEEeCC-C---CEEEEEEecCC-CCCChHHHHHHHhhC
Q 043043           93 KIPYVEIKFATHNFDR---------KLVMGKGAFGNVYRGTLRN-S---MKVAVKRGETG-SGQGLPEFQTAIIVL  154 (154)
Q Consensus        93 ~~~~~~l~~at~~f~~---------~~~iG~g~~g~vy~g~l~~-g---~~vaVK~l~~~-~~~~~~~f~~e~~~l  154 (154)
                      .++|+|+..++.+|+.         .++||+|+||+||+|.... +   ..||||.+... .....++|.+|+++|
T Consensus         6 ~~t~~d~~~a~~~f~~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l   81 (299)
T d1jpaa_           6 PFTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIM   81 (299)
T ss_dssp             GGGSSSHHHHHHHHSCBCCGGGEEEEEEEEECSSSEEEEEEECC---CCEEEEEEECCSSCCHHHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHhhhchhhChhhcEEeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEECcccCHHHHHHHHHHHHHH
Confidence            4667777777766653         3589999999999999842 2   36899998543 222345799998764

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=98.34  E-value=5.7e-08  Score=69.31  Aligned_cols=59  Identities=22%  Similarity=0.370  Sum_probs=44.4

Q ss_pred             HHHHHHhhcCccccceeecCCCcceEEEEeC------CCCEEEEEEecCCCCC-ChHHHHHHHhhC
Q 043043           96 YVEIKFATHNFDRKLVMGKGAFGNVYRGTLR------NSMKVAVKRGETGSGQ-GLPEFQTAIIVL  154 (154)
Q Consensus        96 ~~~l~~at~~f~~~~~iG~g~~g~vy~g~l~------~g~~vaVK~l~~~~~~-~~~~f~~e~~~l  154 (154)
                      +.+++.++++|...+.||+|+||.||+|...      ++..||||++...... ...+|.+|+++|
T Consensus         5 ~~~~e~p~~~~~~~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~il   70 (301)
T d1lufa_           5 LLSLEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALM   70 (301)
T ss_dssp             HHHTBCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHH
T ss_pred             hhhccCCHHHcEEeEEEeeCCCeEEEEEEECCCccCCCCeEEEEEEEChhcChHHHHHHHHHHHHH
Confidence            3455566778888899999999999999874      3478999999644332 245799998764

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.25  E-value=4.6e-07  Score=64.13  Aligned_cols=49  Identities=27%  Similarity=0.494  Sum_probs=39.6

Q ss_pred             CccccceeecCCCcceEEEEeCCCCEEEEEEecCCCCCChHHHHHHHhhC
Q 043043          105 NFDRKLVMGKGAFGNVYRGTLRNSMKVAVKRGETGSGQGLPEFQTAIIVL  154 (154)
Q Consensus       105 ~f~~~~~iG~g~~g~vy~g~l~~g~~vaVK~l~~~~~~~~~~f~~e~~~l  154 (154)
                      ++.-.+.||+|+||.||+|..+++..||||.+... ....++|.+|+.+|
T Consensus        18 ~~~i~~~iG~G~fg~Vy~~~~~~~~~vAiK~l~~~-~~~~~~~~~E~~~l   66 (285)
T d1fmka3          18 SLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPG-TMSPEAFLQEAQVM   66 (285)
T ss_dssp             GEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTT-SSCHHHHHHHHHHH
T ss_pred             HEEEeeEEeeCCCeEEEEEEECCCCEEEEEEECcc-cCCHHHHHHHHHHH
Confidence            45556779999999999999998889999999643 34467899998764

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.21  E-value=2.8e-07  Score=65.06  Aligned_cols=50  Identities=32%  Similarity=0.553  Sum_probs=36.9

Q ss_pred             CccccceeecCCCcceEEEEeCCC-----CEEEEEEecCCCC-CChHHHHHHHhhC
Q 043043          105 NFDRKLVMGKGAFGNVYRGTLRNS-----MKVAVKRGETGSG-QGLPEFQTAIIVL  154 (154)
Q Consensus       105 ~f~~~~~iG~g~~g~vy~g~l~~g-----~~vaVK~l~~~~~-~~~~~f~~e~~~l  154 (154)
                      .|...++||+|+||.||+|.+.+.     ..||||++..... ....+|.+|+++|
T Consensus         8 ~~~~~~~iG~G~fG~Vy~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il   63 (283)
T d1mqba_           8 CVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIM   63 (283)
T ss_dssp             TEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHH
T ss_pred             HeEeeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEEECcccChHHHHHHHHHHHHH
Confidence            466778999999999999998642     3699999964322 2235788998764

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.20  E-value=1.9e-07  Score=66.17  Aligned_cols=50  Identities=30%  Similarity=0.488  Sum_probs=39.2

Q ss_pred             cCccccceeecCCCcceEEEEeC-CCCEEEEEEecCCCCCChHHHHHHHhhC
Q 043043          104 HNFDRKLVMGKGAFGNVYRGTLR-NSMKVAVKRGETGSGQGLPEFQTAIIVL  154 (154)
Q Consensus       104 ~~f~~~~~iG~g~~g~vy~g~l~-~g~~vaVK~l~~~~~~~~~~f~~e~~~l  154 (154)
                      ++|...+.||+|+||+||+|... ++..||||.+... ....++|.+|+++|
T Consensus        17 ~~~~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~i~~~-~~~~~~~~~E~~il   67 (287)
T d1opja_          17 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVM   67 (287)
T ss_dssp             GGEEEEEETTTTTTSSEEEEEEGGGTEEEEEEECCTT-CSCHHHHHHHHHHH
T ss_pred             HHeEEeeEEeeCCCeEEEEEEECCCCeEEEEEEECCc-cchHHHHHHHHHHH
Confidence            34555678999999999999985 4788999999643 33467899998764

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=98.18  E-value=6.7e-07  Score=62.99  Aligned_cols=50  Identities=18%  Similarity=0.240  Sum_probs=39.4

Q ss_pred             CccccceeecCCCcceEEEEeCCCCEEEEEEecCC--CCCChHHHHHHHhhC
Q 043043          105 NFDRKLVMGKGAFGNVYRGTLRNSMKVAVKRGETG--SGQGLPEFQTAIIVL  154 (154)
Q Consensus       105 ~f~~~~~iG~g~~g~vy~g~l~~g~~vaVK~l~~~--~~~~~~~f~~e~~~l  154 (154)
                      +|...+.||+|+||+||++..++|..||||.+...  .......|.+|+.+|
T Consensus         3 ~Y~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il   54 (286)
T d1ob3a_           3 KYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISIL   54 (286)
T ss_dssp             SEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGG
T ss_pred             CceeccEEecCCCcEEEEEEeCCCCEEEEEEEehhhcChHHHHHHHHHHHHH
Confidence            45556789999999999999988999999999533  223346799998764

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.08  E-value=1.6e-06  Score=60.95  Aligned_cols=49  Identities=33%  Similarity=0.494  Sum_probs=37.0

Q ss_pred             cCccccceeecCCCcceEEEEeCCCCEEEEEEecCC--CCCChHHHHHHHhhC
Q 043043          104 HNFDRKLVMGKGAFGNVYRGTLRNSMKVAVKRGETG--SGQGLPEFQTAIIVL  154 (154)
Q Consensus       104 ~~f~~~~~iG~g~~g~vy~g~l~~g~~vaVK~l~~~--~~~~~~~f~~e~~~l  154 (154)
                      ++|...+.||+|+||+||+|.+++  .||||.+...  .......|.+|+++|
T Consensus         8 ~~~~~~~~lG~G~fg~Vy~~~~~~--~vAvK~~~~~~~~~~~~~~~~~E~~~l   58 (276)
T d1uwha_           8 GQITVGQRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVL   58 (276)
T ss_dssp             TCCCCCSEEEECSSCEEEEEESSS--EEEEEECCCSSCCTTHHHHHHHHHHHH
T ss_pred             ccEEEEEEEeeCCCcEEEEEEECC--EEEEEEEEcccCCHHHHHHHHHHHHHH
Confidence            345556789999999999999753  5999999533  333456899998764

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.03  E-value=1.9e-06  Score=60.10  Aligned_cols=46  Identities=33%  Similarity=0.432  Sum_probs=35.3

Q ss_pred             ccccceeecCCCcceEEEEeCCCCEEEEEEecCCCCCChHHHHHHHhhC
Q 043043          106 FDRKLVMGKGAFGNVYRGTLRNSMKVAVKRGETGSGQGLPEFQTAIIVL  154 (154)
Q Consensus       106 f~~~~~iG~g~~g~vy~g~l~~g~~vaVK~l~~~~~~~~~~f~~e~~~l  154 (154)
                      |...+.||+|+||.||+|.+. |+.||||++...  ...++|.+|+++|
T Consensus         9 ~~~~~~lG~G~fg~Vy~~~~~-~~~vAvK~i~~~--~~~~~~~~E~~~l   54 (262)
T d1byga_           9 LKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKND--ATAQAFLAEASVM   54 (262)
T ss_dssp             EEEEEEEEECSSCEEEEEEET-TEEEEEEECCCC--C--HHHHHTHHHH
T ss_pred             eEEeEEEecCCCeEEEEEEEC-CeEEEEEEECcH--HHHHHHHHHHHHH
Confidence            444577999999999999995 688999999542  2346799998763

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.01  E-value=1.3e-06  Score=61.82  Aligned_cols=49  Identities=24%  Similarity=0.384  Sum_probs=35.3

Q ss_pred             ccccc-eeecCCCcceEEEEeC---CCCEEEEEEecCCCCC-ChHHHHHHHhhC
Q 043043          106 FDRKL-VMGKGAFGNVYRGTLR---NSMKVAVKRGETGSGQ-GLPEFQTAIIVL  154 (154)
Q Consensus       106 f~~~~-~iG~g~~g~vy~g~l~---~g~~vaVK~l~~~~~~-~~~~f~~e~~~l  154 (154)
                      +...+ .||+|+||.||+|...   ++..||||.+...... ...+|.+|+++|
T Consensus        10 ~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~E~~il   63 (285)
T d1u59a_          10 LLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIM   63 (285)
T ss_dssp             EEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHH
T ss_pred             eEECCcEEecccCeEEEEEEEecCCCcEEEEEEEEChhcCHHHHHHHHHHHHHH
Confidence            33334 3999999999999874   3457999999644322 346799998764

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.01  E-value=1.3e-06  Score=62.50  Aligned_cols=45  Identities=36%  Similarity=0.526  Sum_probs=33.5

Q ss_pred             ceeecCCCcceEEEEeCCC----CEEEEEEecCC-CCCChHHHHHHHhhC
Q 043043          110 LVMGKGAFGNVYRGTLRNS----MKVAVKRGETG-SGQGLPEFQTAIIVL  154 (154)
Q Consensus       110 ~~iG~g~~g~vy~g~l~~g----~~vaVK~l~~~-~~~~~~~f~~e~~~l  154 (154)
                      ++||+|+||+||+|.+.+.    ..||||+++.. ......+|.+|+++|
T Consensus        33 ~~iG~G~fg~Vyk~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l   82 (311)
T d1r0pa_          33 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIM   82 (311)
T ss_dssp             EEEEEETTEEEEEEEECC----CEEEEEEEECCCCCHHHHHHHHHHHHHH
T ss_pred             eEEeecCCeEEEEEEEECCCCEEEEEEEEEECcccCHHHHHHHHHHHHHH
Confidence            5799999999999998542    36899999643 222346799998764

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.00  E-value=1.6e-06  Score=60.93  Aligned_cols=45  Identities=27%  Similarity=0.302  Sum_probs=32.2

Q ss_pred             ceeecCCCcceEEEEeCC---CCEEEEEEecCCCCC--ChHHHHHHHhhC
Q 043043          110 LVMGKGAFGNVYRGTLRN---SMKVAVKRGETGSGQ--GLPEFQTAIIVL  154 (154)
Q Consensus       110 ~~iG~g~~g~vy~g~l~~---g~~vaVK~l~~~~~~--~~~~f~~e~~~l  154 (154)
                      +.||+|+||.||+|.+.+   +..||||.+......  ..++|.+|+++|
T Consensus        13 k~iG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il   62 (277)
T d1xbba_          13 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVM   62 (277)
T ss_dssp             EEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHH
T ss_pred             CCcccCCCeEEEEEEEccCCcCeEEEEEEEChhhCCHHHHHHHHHHHHHH
Confidence            579999999999998753   357999999543222  245799998764

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.00  E-value=3.7e-06  Score=59.57  Aligned_cols=50  Identities=22%  Similarity=0.317  Sum_probs=39.6

Q ss_pred             CccccceeecCCCcceEEEEe-CCCCEEEEEEecCCCCCChHHHHHHHhhC
Q 043043          105 NFDRKLVMGKGAFGNVYRGTL-RNSMKVAVKRGETGSGQGLPEFQTAIIVL  154 (154)
Q Consensus       105 ~f~~~~~iG~g~~g~vy~g~l-~~g~~vaVK~l~~~~~~~~~~f~~e~~~l  154 (154)
                      .|...+.||+|+||.||++.- .+|..||||.+........+.|.+|+++|
T Consensus        21 ~Y~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il   71 (293)
T d1yhwa1          21 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVM   71 (293)
T ss_dssp             TBCSCEECCCSSSCEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHH
T ss_pred             ccEEEEEEecCcCcEEEEEEECCCCCEEEEEEEecccChHHHHHHHHHHHH
Confidence            466667899999999999985 56899999999654444567799998764

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.98  E-value=2.8e-06  Score=60.54  Aligned_cols=51  Identities=22%  Similarity=0.346  Sum_probs=37.5

Q ss_pred             cCccccceeecCCCcceEEEEe-CCCCEEEEEEecCC--CCCChHHHHHHHhhC
Q 043043          104 HNFDRKLVMGKGAFGNVYRGTL-RNSMKVAVKRGETG--SGQGLPEFQTAIIVL  154 (154)
Q Consensus       104 ~~f~~~~~iG~g~~g~vy~g~l-~~g~~vaVK~l~~~--~~~~~~~f~~e~~~l  154 (154)
                      ++|...+.||+|+||+||++.- .+|..||||.+...  ......++.+|+++|
T Consensus        10 ~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il   63 (318)
T d3blha1          10 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKIL   63 (318)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC----CTTSSCHHHHHHHHHH
T ss_pred             CCEEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHH
Confidence            3456667899999999999986 57899999998432  233446788888754

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.95  E-value=1.1e-06  Score=62.62  Aligned_cols=51  Identities=27%  Similarity=0.427  Sum_probs=36.9

Q ss_pred             cCccccceeecCCCcceEEEEeC------CCCEEEEEEecCC-CCCChHHHHHHHhhC
Q 043043          104 HNFDRKLVMGKGAFGNVYRGTLR------NSMKVAVKRGETG-SGQGLPEFQTAIIVL  154 (154)
Q Consensus       104 ~~f~~~~~iG~g~~g~vy~g~l~------~g~~vaVK~l~~~-~~~~~~~f~~e~~~l  154 (154)
                      ++|.....||+|+||+||+|...      .++.||||++... .......|.+|+++|
T Consensus        20 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~~~~~~~~~~~~E~~il   77 (308)
T d1p4oa_          20 EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM   77 (308)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHG
T ss_pred             HHeEEeeEEeeCCCeEEEEEEECCcccCCCCcEEEEEEECcccChHHHHHHHHHHHHH
Confidence            34555678999999999999873      2578999999643 222234688998764

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.95  E-value=2.9e-06  Score=60.01  Aligned_cols=49  Identities=31%  Similarity=0.466  Sum_probs=38.6

Q ss_pred             ccccceeecCCCcceEEEEeC-CCCEEEEEEecCCCCCChHHHHHHHhhC
Q 043043          106 FDRKLVMGKGAFGNVYRGTLR-NSMKVAVKRGETGSGQGLPEFQTAIIVL  154 (154)
Q Consensus       106 f~~~~~iG~g~~g~vy~g~l~-~g~~vaVK~l~~~~~~~~~~f~~e~~~l  154 (154)
                      |.....||+|+||.||++.-. ++..||||.+........+.|.+|+++|
T Consensus        14 Y~i~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~E~~il   63 (288)
T d2jfla1          14 WEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDIL   63 (288)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECSSSGGGGGTHHHHHHH
T ss_pred             eEEeEEEeeCCCcEEEEEEECCCCeEEEEEEECcCCHHHHHHHHHHHHHH
Confidence            444567999999999999874 6789999999755555557888998764

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.94  E-value=4.4e-06  Score=59.12  Aligned_cols=50  Identities=24%  Similarity=0.319  Sum_probs=37.2

Q ss_pred             CccccceeecCCCcceEEEEe-CCCCEEEEEEecCC--CCCChHHHHHHHhhC
Q 043043          105 NFDRKLVMGKGAFGNVYRGTL-RNSMKVAVKRGETG--SGQGLPEFQTAIIVL  154 (154)
Q Consensus       105 ~f~~~~~iG~g~~g~vy~g~l-~~g~~vaVK~l~~~--~~~~~~~f~~e~~~l  154 (154)
                      +|...+.||+|+||.||++.- .+|+.||||.+...  .......|.+|+.+|
T Consensus         3 ~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il   55 (298)
T d1gz8a_           3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLL   55 (298)
T ss_dssp             TEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEC-------CCHHHHHHHHHH
T ss_pred             CCEeccEEecCcCeEEEEEEECCCCCEEEEEEEehhhcChHHHHHHHHHHHHH
Confidence            466668899999999999986 56899999999533  223356788998764

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.94  E-value=4.1e-06  Score=59.81  Aligned_cols=49  Identities=33%  Similarity=0.483  Sum_probs=35.2

Q ss_pred             ccccceeecCCCcceEEEEeC-CCC----EEEEEEecC-CCCCChHHHHHHHhhC
Q 043043          106 FDRKLVMGKGAFGNVYRGTLR-NSM----KVAVKRGET-GSGQGLPEFQTAIIVL  154 (154)
Q Consensus       106 f~~~~~iG~g~~g~vy~g~l~-~g~----~vaVK~l~~-~~~~~~~~f~~e~~~l  154 (154)
                      |...++||+|+||+||+|... +|.    .||+|++.. .+....++|.+|+++|
T Consensus        11 y~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l   65 (317)
T d1xkka_          11 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM   65 (317)
T ss_dssp             EEEEEEEEECSSEEEEEEEECC----CCEEEEEEEECC----CTHHHHHHHHHHH
T ss_pred             CEEeeEEecCCCeEEEEEEEcCCCCEEEEEEEEEEeccccCHHHHHHHHHHHHHH
Confidence            666689999999999999874 333    689999954 3344567899998764

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.92  E-value=5.4e-06  Score=58.13  Aligned_cols=50  Identities=20%  Similarity=0.331  Sum_probs=37.5

Q ss_pred             CccccceeecCCCcceEEEEe-CCCCEEEEEEecCCC--CCChHHHHHHHhhC
Q 043043          105 NFDRKLVMGKGAFGNVYRGTL-RNSMKVAVKRGETGS--GQGLPEFQTAIIVL  154 (154)
Q Consensus       105 ~f~~~~~iG~g~~g~vy~g~l-~~g~~vaVK~l~~~~--~~~~~~f~~e~~~l  154 (154)
                      .|...+.||+|+||+||+++- .++..||||++....  ......+.+|+.+|
T Consensus         3 ry~~i~~LG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il   55 (292)
T d1unla_           3 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLL   55 (292)
T ss_dssp             SEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHH
T ss_pred             CCEeeeEEecCcCeEEEEEEECCCCcEEEEEEEehhhCChHHHHHHHHHHHHH
Confidence            355567899999999999996 577899999995432  22346788888754

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.91  E-value=2.2e-06  Score=61.04  Aligned_cols=50  Identities=26%  Similarity=0.474  Sum_probs=34.6

Q ss_pred             CccccceeecCCCcceEEEEeCC-CC--EEEEEEecCC-CCCChHHHHHHHhhC
Q 043043          105 NFDRKLVMGKGAFGNVYRGTLRN-SM--KVAVKRGETG-SGQGLPEFQTAIIVL  154 (154)
Q Consensus       105 ~f~~~~~iG~g~~g~vy~g~l~~-g~--~vaVK~l~~~-~~~~~~~f~~e~~~l  154 (154)
                      +|...++||+|+||.||+|...+ |.  .||||++... ......+|.+|+++|
T Consensus        11 ~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l   64 (309)
T d1fvra_          11 DIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVL   64 (309)
T ss_dssp             GCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHH
T ss_pred             HcEEEEEEeeCCCcEEEEEEECCCCeEEEEEEEEECcccChHHHHHHHHHHHHH
Confidence            45556789999999999999854 33  5789988543 333456799998764

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.89  E-value=6.1e-06  Score=59.06  Aligned_cols=51  Identities=18%  Similarity=0.181  Sum_probs=39.4

Q ss_pred             cCccccceeecCCCcceEEEEe-CCCCEEEEEEecCCCC-CChHHHHHHHhhC
Q 043043          104 HNFDRKLVMGKGAFGNVYRGTL-RNSMKVAVKRGETGSG-QGLPEFQTAIIVL  154 (154)
Q Consensus       104 ~~f~~~~~iG~g~~g~vy~g~l-~~g~~vaVK~l~~~~~-~~~~~f~~e~~~l  154 (154)
                      ++|...+.||+|+||.||++.- .+|..||+|.+..... ....++.+|+.+|
T Consensus         6 d~y~~~~~iG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~il   58 (322)
T d1s9ja_           6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVL   58 (322)
T ss_dssp             GGEEEEEEEECCSSCCEEEEEETTTTEEEEEEEEECCCCTTHHHHHHHHGGGG
T ss_pred             cCCEEEEEEecCCCeEEEEEEECCCCcEEEEEEEChhhCHHHHHHHHHHHHHH
Confidence            4566668899999999999986 4688999999964432 2346788998764

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.88  E-value=4.3e-06  Score=58.47  Aligned_cols=50  Identities=14%  Similarity=0.238  Sum_probs=37.7

Q ss_pred             CccccceeecCCCcceEEEEe-CCCCEEEEEEecCCCCC--ChHHHHHHHhhC
Q 043043          105 NFDRKLVMGKGAFGNVYRGTL-RNSMKVAVKRGETGSGQ--GLPEFQTAIIVL  154 (154)
Q Consensus       105 ~f~~~~~iG~g~~g~vy~g~l-~~g~~vaVK~l~~~~~~--~~~~f~~e~~~l  154 (154)
                      +|...+.||+|+||.||++.- .+|..||+|.+......  ....|.+|+++|
T Consensus         5 dy~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il   57 (269)
T d2java1           5 DYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLL   57 (269)
T ss_dssp             GEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCTTSCHHHHHHHHHHHHHT
T ss_pred             hCEEeEEEecCCCeEEEEEEECCCCCEEEEEEEChhhCCHHHHHHHHHHHHHH
Confidence            355567899999999999986 46889999999644222  235688898765

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=97.85  E-value=5.4e-06  Score=59.11  Aligned_cols=50  Identities=30%  Similarity=0.389  Sum_probs=37.6

Q ss_pred             CccccceeecCCCcceEEEEe-CCCCEEEEEEecCCCCCC---hHHHHHHHhhC
Q 043043          105 NFDRKLVMGKGAFGNVYRGTL-RNSMKVAVKRGETGSGQG---LPEFQTAIIVL  154 (154)
Q Consensus       105 ~f~~~~~iG~g~~g~vy~g~l-~~g~~vaVK~l~~~~~~~---~~~f~~e~~~l  154 (154)
                      .|...+.||+|+||.||++.- .++..||||.+.......   ...|.+|+++|
T Consensus        16 ~y~~l~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~Ei~il   69 (309)
T d1u5ra_          16 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFL   69 (309)
T ss_dssp             HEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEECCSSCHHHHHHHHHHHHHHH
T ss_pred             hcEeeEEEecCCCeEEEEEEECCCCcEEEEEEEchhhccCHHHHHHHHHHHHHH
Confidence            366678899999999999985 567899999996433222   24688888764

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.85  E-value=1.1e-05  Score=56.93  Aligned_cols=50  Identities=18%  Similarity=0.275  Sum_probs=37.4

Q ss_pred             CccccceeecCCCcceEEEEe-CCCCEEEEEEecCCC------CCChHHHHHHHhhC
Q 043043          105 NFDRKLVMGKGAFGNVYRGTL-RNSMKVAVKRGETGS------GQGLPEFQTAIIVL  154 (154)
Q Consensus       105 ~f~~~~~iG~g~~g~vy~g~l-~~g~~vaVK~l~~~~------~~~~~~f~~e~~~l  154 (154)
                      .|...+.||+|+||.||++.- .+|..||||.+....      ......|.+|+.+|
T Consensus        11 ~Y~~~~~lG~G~fg~Vy~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~E~~il   67 (293)
T d1jksa_          11 YYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSIL   67 (293)
T ss_dssp             TEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHH
T ss_pred             CEEEeEEEecCCCeEEEEEEECCCCCEEEEEEEEhhhcchhhhhHHHHHHHHHHHHH
Confidence            455567899999999999987 468899999985321      11346788998754

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=97.80  E-value=9.6e-06  Score=57.96  Aligned_cols=47  Identities=21%  Similarity=0.345  Sum_probs=36.8

Q ss_pred             CccccceeecCCCcceEEEEe-CCCCEEEEEEecCCCCCChHHHHHHHhhC
Q 043043          105 NFDRKLVMGKGAFGNVYRGTL-RNSMKVAVKRGETGSGQGLPEFQTAIIVL  154 (154)
Q Consensus       105 ~f~~~~~iG~g~~g~vy~g~l-~~g~~vaVK~l~~~~~~~~~~f~~e~~~l  154 (154)
                      +|.....||+|+||+||+++- .+|..||+|++..   ....++.+|+++|
T Consensus        36 ~y~i~~~LG~G~fg~V~~a~~~~~~~~vAiK~i~~---~~~~~~~~Ei~il   83 (328)
T d3bqca1          36 DYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKP---VKKKKIKREIKIL   83 (328)
T ss_dssp             GEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECS---SCHHHHHHHHHHH
T ss_pred             CeEEEEEEecCcCeEEEEEEECCCCCEEEEEEECH---HHHHHHHHHHHHH
Confidence            455567899999999999986 5688999999863   2356788888754

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.78  E-value=1.2e-05  Score=56.13  Aligned_cols=49  Identities=18%  Similarity=0.165  Sum_probs=36.6

Q ss_pred             ccccceeecCCCcceEEEEe-CCCCEEEEEEecCCCCCC---hHHHHHHHhhC
Q 043043          106 FDRKLVMGKGAFGNVYRGTL-RNSMKVAVKRGETGSGQG---LPEFQTAIIVL  154 (154)
Q Consensus       106 f~~~~~iG~g~~g~vy~g~l-~~g~~vaVK~l~~~~~~~---~~~f~~e~~~l  154 (154)
                      |.-.+.||+|+||.||++.- .+|..||||.+......+   ...|.+|+++|
T Consensus         9 Y~i~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~~l   61 (277)
T d1o6ya_           9 YELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNA   61 (277)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTTTCHHHHHHHHHHHHHH
T ss_pred             eEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHH
Confidence            45557899999999999985 568899999996433322   24688888653

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.77  E-value=6.6e-06  Score=57.62  Aligned_cols=50  Identities=22%  Similarity=0.250  Sum_probs=35.3

Q ss_pred             CccccceeecCCCcceEEEEe-CCCCEEEEEEecCCC-CCChHHHHHHHhhC
Q 043043          105 NFDRKLVMGKGAFGNVYRGTL-RNSMKVAVKRGETGS-GQGLPEFQTAIIVL  154 (154)
Q Consensus       105 ~f~~~~~iG~g~~g~vy~g~l-~~g~~vaVK~l~~~~-~~~~~~f~~e~~~l  154 (154)
                      +|...+.||+|+||.||++.- .+|..||||.+.... ....+.|.+|+++|
T Consensus         6 dy~~~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~~l   57 (271)
T d1nvra_           6 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICIN   57 (271)
T ss_dssp             EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHH
T ss_pred             ceEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHH
Confidence            355557899999999999987 468899999996432 22345688888753

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.76  E-value=5e-06  Score=60.01  Aligned_cols=50  Identities=22%  Similarity=0.246  Sum_probs=34.2

Q ss_pred             CccccceeecCCCcceEEEEe-CCCCEEEEEEecCCCC-CChHHHHHHHhhC
Q 043043          105 NFDRKLVMGKGAFGNVYRGTL-RNSMKVAVKRGETGSG-QGLPEFQTAIIVL  154 (154)
Q Consensus       105 ~f~~~~~iG~g~~g~vy~g~l-~~g~~vaVK~l~~~~~-~~~~~f~~e~~~l  154 (154)
                      +|.....||+|+||+||+|.- .+|..||||++..... .....+.+|+++|
T Consensus         9 rY~~~~~LG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il   60 (345)
T d1pmea_           9 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKIL   60 (345)
T ss_dssp             TEEEEEECC---CCCEEEEEETTTCSEEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CeEEEEEEeeccCeEEEEEEECCCCcEEEEEEEehhcChHHHHHHHHHHHHH
Confidence            355567899999999999975 5789999999964322 2235688888764

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.75  E-value=4.4e-06  Score=60.17  Aligned_cols=50  Identities=20%  Similarity=0.261  Sum_probs=36.9

Q ss_pred             CccccceeecCCCcceEEEEe-CCCCEEEEEEecCCCC--CChHHHHHHHhhC
Q 043043          105 NFDRKLVMGKGAFGNVYRGTL-RNSMKVAVKRGETGSG--QGLPEFQTAIIVL  154 (154)
Q Consensus       105 ~f~~~~~iG~g~~g~vy~g~l-~~g~~vaVK~l~~~~~--~~~~~f~~e~~~l  154 (154)
                      +|.....||+|+||+||++.- .+|..||||.+.....  .....+.+|+++|
T Consensus        19 rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il   71 (348)
T d2gfsa1          19 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL   71 (348)
T ss_dssp             TEEEEEECGGGTTSSEEEEEETTTTEEEEEEECSCTTSSHHHHHHHHHHHHHH
T ss_pred             CeEEEEEEecCCCeEEEEEEECCCCCEEEEEEECchhcChHHHHHHHHHHHHH
Confidence            455567899999999999984 5789999999964322  2234677888753

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=97.74  E-value=5.6e-06  Score=60.09  Aligned_cols=50  Identities=22%  Similarity=0.166  Sum_probs=37.8

Q ss_pred             CccccceeecCCCcceEEEEe-CCCCEEEEEEecCCCCCChHHHHHHHhhC
Q 043043          105 NFDRKLVMGKGAFGNVYRGTL-RNSMKVAVKRGETGSGQGLPEFQTAIIVL  154 (154)
Q Consensus       105 ~f~~~~~iG~g~~g~vy~g~l-~~g~~vaVK~l~~~~~~~~~~f~~e~~~l  154 (154)
                      .|...+.||+|+||.||++.- .+|..||||.+..........+.+|+++|
T Consensus        30 ~Y~i~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~Ei~il   80 (352)
T d1koba_          30 YYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIM   80 (352)
T ss_dssp             TEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHH
T ss_pred             ceEEEEEEecCCCeEEEEEEECCCCCEEEEEEECCcchhHHHHHHHHHHHH
Confidence            355567899999999999985 56899999999654333345678888753

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=97.73  E-value=6.3e-06  Score=59.78  Aligned_cols=50  Identities=26%  Similarity=0.248  Sum_probs=37.8

Q ss_pred             CccccceeecCCCcceEEEEe-CCCCEEEEEEecCCCCCChHHHHHHHhhC
Q 043043          105 NFDRKLVMGKGAFGNVYRGTL-RNSMKVAVKRGETGSGQGLPEFQTAIIVL  154 (154)
Q Consensus       105 ~f~~~~~iG~g~~g~vy~g~l-~~g~~vaVK~l~~~~~~~~~~f~~e~~~l  154 (154)
                      +|.....||+|+||.||++.- .+|..||||.+..........|.+|+.+|
T Consensus        27 ~Y~i~~~lG~G~fg~Vy~~~~~~~g~~vAvK~i~~~~~~~~~~~~~E~~il   77 (350)
T d1koaa2          27 HYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTM   77 (350)
T ss_dssp             TEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECCCSHHHHHHHHHHHHHH
T ss_pred             CeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEcccchhhHHHHHHHHHHH
Confidence            455567899999999999986 46889999999644333345688888653

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.72  E-value=6.5e-06  Score=58.61  Aligned_cols=50  Identities=26%  Similarity=0.325  Sum_probs=36.0

Q ss_pred             cCccccceeecCCCcceEEEEe------CCCCEEEEEEecCCCCC-ChHHHHHHHhh
Q 043043          104 HNFDRKLVMGKGAFGNVYRGTL------RNSMKVAVKRGETGSGQ-GLPEFQTAIIV  153 (154)
Q Consensus       104 ~~f~~~~~iG~g~~g~vy~g~l------~~g~~vaVK~l~~~~~~-~~~~f~~e~~~  153 (154)
                      +.+...+.||+|+||.||+|++      ..+..||||++...... ...+|.+|+.+
T Consensus        23 ~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~~   79 (311)
T d1t46a_          23 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKV   79 (311)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHH
T ss_pred             HHeEEeeEEeecCCeEEEEEEEeccccCCCCeEEEEEEECcccCHHHHHHHHHHHHH
Confidence            3455567899999999999986      24568999999643322 33468888764

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.69  E-value=1.1e-05  Score=56.28  Aligned_cols=45  Identities=22%  Similarity=0.386  Sum_probs=34.2

Q ss_pred             ceeecCCCcceEEEEeC-CCCEEEEEEecCC--CCCChHHHHHHHhhC
Q 043043          110 LVMGKGAFGNVYRGTLR-NSMKVAVKRGETG--SGQGLPEFQTAIIVL  154 (154)
Q Consensus       110 ~~iG~g~~g~vy~g~l~-~g~~vaVK~l~~~--~~~~~~~f~~e~~~l  154 (154)
                      ..||+|+||+||++.-. ++..||+|.+...  .......|.+|+++|
T Consensus        15 ~~iG~G~fg~Vy~~~~~~~~~~va~K~i~~~~~~~~~~~~~~~E~~il   62 (270)
T d1t4ha_          15 IEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEML   62 (270)
T ss_dssp             EEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHH
T ss_pred             eEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHH
Confidence            46999999999999874 5789999999543  222345688998764

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.66  E-value=6.5e-06  Score=57.61  Aligned_cols=49  Identities=24%  Similarity=0.385  Sum_probs=28.2

Q ss_pred             ccccceeecCCCcceEEEEeC--CC--CEEEEEEecCCC---CCChHHHHHHHhhC
Q 043043          106 FDRKLVMGKGAFGNVYRGTLR--NS--MKVAVKRGETGS---GQGLPEFQTAIIVL  154 (154)
Q Consensus       106 f~~~~~iG~g~~g~vy~g~l~--~g--~~vaVK~l~~~~---~~~~~~f~~e~~~l  154 (154)
                      |.....||+|+||.||+|.+.  ++  ..||||.+....   ....++|.+|+++|
T Consensus        10 ~~~~~~iG~G~fg~Vy~~~~~~~~~~~~~vAiK~l~~~~~~~~~~~~~~~~Ei~~l   65 (273)
T d1u46a_          10 LRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAM   65 (273)
T ss_dssp             EEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHH
T ss_pred             eEEEEEEecCCCeEEEEEEEECCCCcEEEEEEEEEChhhcCCHHHHHHHHHHHHHH
Confidence            444467999999999999873  22  368999995432   22235799998754

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.65  E-value=7.5e-06  Score=59.01  Aligned_cols=51  Identities=22%  Similarity=0.196  Sum_probs=31.1

Q ss_pred             cCccccceeecCCCcceEEEEe-CCCCEEEEEEecCCCCC--ChHHHHHHHhhC
Q 043043          104 HNFDRKLVMGKGAFGNVYRGTL-RNSMKVAVKRGETGSGQ--GLPEFQTAIIVL  154 (154)
Q Consensus       104 ~~f~~~~~iG~g~~g~vy~g~l-~~g~~vaVK~l~~~~~~--~~~~f~~e~~~l  154 (154)
                      .+|.....||+|+||.||++.- .+|..||||++......  ....+.+|+++|
T Consensus        18 ~~Y~~i~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il   71 (346)
T d1cm8a_          18 AVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLL   71 (346)
T ss_dssp             SSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHH
T ss_pred             CcEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEchhhcChHHHHHHHHHHHHH
Confidence            3455667899999999999985 56899999999643221  234677888754

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.62  E-value=1.9e-05  Score=56.44  Aligned_cols=51  Identities=25%  Similarity=0.370  Sum_probs=34.9

Q ss_pred             cCccccceeecCCCcceEEEEeCCC------CEEEEEEecCC-CCCChHHHHHHHhhC
Q 043043          104 HNFDRKLVMGKGAFGNVYRGTLRNS------MKVAVKRGETG-SGQGLPEFQTAIIVL  154 (154)
Q Consensus       104 ~~f~~~~~iG~g~~g~vy~g~l~~g------~~vaVK~l~~~-~~~~~~~f~~e~~~l  154 (154)
                      ++|...++||+|+||+||+|...+.      ..||||.+... .......|.+|+.+|
T Consensus        37 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l   94 (325)
T d1rjba_          37 ENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMM   94 (325)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHH
T ss_pred             HHeEEeeEEeeCCCeEEEEEEEcCCCcccceeEEEEEEeccccCHHHHHHHHHHHHHH
Confidence            4566668899999999999987431      36999998543 333456788887653

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.61  E-value=1.7e-05  Score=55.85  Aligned_cols=49  Identities=22%  Similarity=0.240  Sum_probs=37.4

Q ss_pred             ccccceeecCCCcceEEEEe-CCCCEEEEEEecC---CCCCChHHHHHHHhhC
Q 043043          106 FDRKLVMGKGAFGNVYRGTL-RNSMKVAVKRGET---GSGQGLPEFQTAIIVL  154 (154)
Q Consensus       106 f~~~~~iG~g~~g~vy~g~l-~~g~~vaVK~l~~---~~~~~~~~f~~e~~~l  154 (154)
                      |.....||+|+||.||++.- .+|..||||.+..   ........|.+|+++|
T Consensus        10 y~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~E~~il   62 (288)
T d1uu3a_          10 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVM   62 (288)
T ss_dssp             EEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHH
T ss_pred             CEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccCHHHHHHHHHHHHHH
Confidence            55567899999999999987 4688999999842   1233456788888753

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.60  E-value=9.9e-06  Score=58.64  Aligned_cols=50  Identities=16%  Similarity=0.149  Sum_probs=34.8

Q ss_pred             CccccceeecCCCcceEEEEeC-CCCEEEEEEecCCCCC--ChHHHHHHHhhC
Q 043043          105 NFDRKLVMGKGAFGNVYRGTLR-NSMKVAVKRGETGSGQ--GLPEFQTAIIVL  154 (154)
Q Consensus       105 ~f~~~~~iG~g~~g~vy~g~l~-~g~~vaVK~l~~~~~~--~~~~f~~e~~~l  154 (154)
                      .|...++||+|+||+||+|.-. +|..||||++......  ....+.+|+.+|
T Consensus        18 ~Y~i~~~LG~G~fg~V~~~~d~~t~~~vAvK~i~~~~~~~~~~~~~~~Ei~il   70 (355)
T d2b1pa1          18 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLM   70 (355)
T ss_dssp             TEEEEEECSCC--CEEEEEEETTTTEEEEEEEEESTTSSHHHHHHHHHHHHHH
T ss_pred             CeEEEEEeecCcCeEEEEEEECCCCCEEEEEEEChhhcCHHHHHHHHHHHHHH
Confidence            4566678999999999999864 6899999999643222  224577887653

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=97.60  E-value=2.3e-05  Score=55.17  Aligned_cols=46  Identities=24%  Similarity=0.417  Sum_probs=34.0

Q ss_pred             ccccceeecCCCcceEEEEe-CCCCEEEEEEecCCCCCChHHHHHHHhh
Q 043043          106 FDRKLVMGKGAFGNVYRGTL-RNSMKVAVKRGETGSGQGLPEFQTAIIV  153 (154)
Q Consensus       106 f~~~~~iG~g~~g~vy~g~l-~~g~~vaVK~l~~~~~~~~~~f~~e~~~  153 (154)
                      |.-...||+|+||.||+|.- .+|..||||.+.....  ..++..|+++
T Consensus         9 Y~l~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~--~~~~~~E~~i   55 (299)
T d1ckia_           9 YRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKI   55 (299)
T ss_dssp             EEEEEEEEECSSSEEEEEEETTTTEEEEEEEEESCTT--SCCHHHHHHH
T ss_pred             EEEeEEEeeCCCcEEEEEEECCCCCEEEEEEEchhcc--CHHHHHHHHH
Confidence            45557899999999999986 5678999999864322  2346667654

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=97.59  E-value=1.5e-05  Score=56.67  Aligned_cols=50  Identities=26%  Similarity=0.284  Sum_probs=32.9

Q ss_pred             CccccceeecCCCcceEEEEeC-CCCEEEEEEecCCC-CCChHHHHHHHhhC
Q 043043          105 NFDRKLVMGKGAFGNVYRGTLR-NSMKVAVKRGETGS-GQGLPEFQTAIIVL  154 (154)
Q Consensus       105 ~f~~~~~iG~g~~g~vy~g~l~-~g~~vaVK~l~~~~-~~~~~~f~~e~~~l  154 (154)
                      .|...+.||+|+||.||++.-. ++..||||.+.... ......|.+|+.+|
T Consensus        10 ~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il   61 (307)
T d1a06a_          10 IYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVL   61 (307)
T ss_dssp             TEEEEEESBSGGGGGEEEEEETTTCCEEEEEEEEC----------CHHHHHH
T ss_pred             ceEEEEEEeeccCeEEEEEEECCCCCEEEEEEEchHHhhhHHHHHHHHHHHH
Confidence            3555678999999999999864 57899999995332 22334577787653

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.59  E-value=9.6e-06  Score=57.25  Aligned_cols=50  Identities=22%  Similarity=0.311  Sum_probs=33.1

Q ss_pred             cCccccceeecCCCcceEEEEeC------CCCEEEEEEecCCCC-CChHHHHHHHhh
Q 043043          104 HNFDRKLVMGKGAFGNVYRGTLR------NSMKVAVKRGETGSG-QGLPEFQTAIIV  153 (154)
Q Consensus       104 ~~f~~~~~iG~g~~g~vy~g~l~------~g~~vaVK~l~~~~~-~~~~~f~~e~~~  153 (154)
                      ++|...+.||+|+||.||+|...      .+..||||.+..... ...+.|.+|.+.
T Consensus        13 ~~y~~~~~iG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~e~~~   69 (299)
T d1ywna1          13 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKI   69 (299)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEEESTTSSSCEEEEEEEEC----CHHHHHHHHHHHHH
T ss_pred             HHEEEeeEEeecCCeEEEEEEEcCCCcccCCeEEEEEEEccccCcHHHHHHHHHHHH
Confidence            45666688999999999999863      235799999964322 223456666543

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.58  E-value=1.8e-05  Score=55.82  Aligned_cols=50  Identities=22%  Similarity=0.345  Sum_probs=34.4

Q ss_pred             cCccccceeecCCCcceEEEEe-C-CCCEEEEEEecC--CCCCChHHHHHHHhh
Q 043043          104 HNFDRKLVMGKGAFGNVYRGTL-R-NSMKVAVKRGET--GSGQGLPEFQTAIIV  153 (154)
Q Consensus       104 ~~f~~~~~iG~g~~g~vy~g~l-~-~g~~vaVK~l~~--~~~~~~~~f~~e~~~  153 (154)
                      ++|.-...||+|+||.||++.- . ++..||||.+..  .......++.+|+.+
T Consensus         7 ~~Y~i~~~LG~G~fg~V~~a~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~~   60 (305)
T d1blxa_           7 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAV   60 (305)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHH
T ss_pred             CCEEEEEEEecccCeEEEEEEEECCCCEEEEEEEEehhhccchHHHHHHHHHHH
Confidence            4466667899999999999985 3 356799999843  222233456666653

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.57  E-value=2e-05  Score=54.79  Aligned_cols=49  Identities=22%  Similarity=0.312  Sum_probs=37.1

Q ss_pred             ccccceeecCCCcceEEEEeC-CCCEEEEEEecC---CCCCChHHHHHHHhhC
Q 043043          106 FDRKLVMGKGAFGNVYRGTLR-NSMKVAVKRGET---GSGQGLPEFQTAIIVL  154 (154)
Q Consensus       106 f~~~~~iG~g~~g~vy~g~l~-~g~~vaVK~l~~---~~~~~~~~f~~e~~~l  154 (154)
                      |...+.||+|+||.||++.-. ++..||+|.+..   ........|.+|+++|
T Consensus         8 y~i~~~iG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il   60 (263)
T d2j4za1           8 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQ   60 (263)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHH
T ss_pred             eEEEEEEecCCCcEEEEEEECCCCcEEEEEEEchHHccChHHHHHHHHHHHHH
Confidence            555578999999999999874 578999999842   2233456788888753

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.54  E-value=1.8e-05  Score=55.16  Aligned_cols=50  Identities=20%  Similarity=0.403  Sum_probs=35.7

Q ss_pred             CccccceeecCCCcceEEEEeCC----CCEEEEEEecCCCCC-ChHHHHHHHhhC
Q 043043          105 NFDRKLVMGKGAFGNVYRGTLRN----SMKVAVKRGETGSGQ-GLPEFQTAIIVL  154 (154)
Q Consensus       105 ~f~~~~~iG~g~~g~vy~g~l~~----g~~vaVK~l~~~~~~-~~~~f~~e~~~l  154 (154)
                      +|...+.||+|+||.||+|....    +..||||.+...... ....|.+|+++|
T Consensus         8 ~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~E~~~l   62 (273)
T d1mp8a_           8 RIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTM   62 (273)
T ss_dssp             GEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHH
T ss_pred             HeEEEEEEeeCCCcEEEEEEEecCCceeEEEEEEEeccccCHHHHHHHHHHHHHH
Confidence            45556789999999999998742    346899998543322 235688888753

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.54  E-value=3e-05  Score=55.89  Aligned_cols=34  Identities=32%  Similarity=0.553  Sum_probs=28.4

Q ss_pred             ccccceeecCCCcceEEEEeC-CCCEEEEEEecCC
Q 043043          106 FDRKLVMGKGAFGNVYRGTLR-NSMKVAVKRGETG  139 (154)
Q Consensus       106 f~~~~~iG~g~~g~vy~g~l~-~g~~vaVK~l~~~  139 (154)
                      |...++||+|+||+||++.-. +|..||||++...
T Consensus        22 Y~~~k~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~   56 (350)
T d1q5ka_          22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD   56 (350)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC
T ss_pred             cEeeeEEeeCcCeEEEEEEECCCCCEEEEEEECcc
Confidence            455678999999999999974 6889999999643

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=97.52  E-value=2.6e-05  Score=55.63  Aligned_cols=50  Identities=20%  Similarity=0.185  Sum_probs=37.5

Q ss_pred             CccccceeecCCCcceEEEEe-CCCCEEEEEEecC---CCCCChHHHHHHHhhC
Q 043043          105 NFDRKLVMGKGAFGNVYRGTL-RNSMKVAVKRGET---GSGQGLPEFQTAIIVL  154 (154)
Q Consensus       105 ~f~~~~~iG~g~~g~vy~g~l-~~g~~vaVK~l~~---~~~~~~~~f~~e~~~l  154 (154)
                      +|...+.||+|+||.||++.- .+|..||||.+..   ........|.+|+.+|
T Consensus         5 dy~i~~~lG~G~fg~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~E~~il   58 (316)
T d1fota_           5 DFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLML   58 (316)
T ss_dssp             GEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHH
T ss_pred             HeEEEEEEecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHH
Confidence            355567899999999999986 4689999999842   1233456788888653

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=97.51  E-value=4.7e-05  Score=53.24  Aligned_cols=34  Identities=26%  Similarity=0.329  Sum_probs=28.6

Q ss_pred             CccccceeecCCCcceEEEEe-CCCCEEEEEEecC
Q 043043          105 NFDRKLVMGKGAFGNVYRGTL-RNSMKVAVKRGET  138 (154)
Q Consensus       105 ~f~~~~~iG~g~~g~vy~g~l-~~g~~vaVK~l~~  138 (154)
                      +|...+.||+|+||+||++.- .+|..+|||.+..
T Consensus         4 ~y~~~~~iG~G~~g~V~~~~~~~~~~~~AvK~i~~   38 (277)
T d1phka_           4 NYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDV   38 (277)
T ss_dssp             TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEET
T ss_pred             cCEEceEEecCcCeEEEEEEECCCCCEEEEEEEec
Confidence            455668899999999999986 5788999999954

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=97.48  E-value=8.3e-05  Score=52.24  Aligned_cols=34  Identities=29%  Similarity=0.530  Sum_probs=28.0

Q ss_pred             CccccceeecCCCcceEEEEe-CCCCEEEEEEecC
Q 043043          105 NFDRKLVMGKGAFGNVYRGTL-RNSMKVAVKRGET  138 (154)
Q Consensus       105 ~f~~~~~iG~g~~g~vy~g~l-~~g~~vaVK~l~~  138 (154)
                      +|.-.+.||+|+||.||+|+- .+|..||||.+..
T Consensus         6 ~Y~i~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~   40 (293)
T d1csna_           6 HYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPR   40 (293)
T ss_dssp             TEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEEC
T ss_pred             ceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEcc
Confidence            455567899999999999996 4678999999854

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.47  E-value=3.4e-05  Score=55.82  Aligned_cols=49  Identities=22%  Similarity=0.249  Sum_probs=36.8

Q ss_pred             ccccceeecCCCcceEEEEe-CCCCEEEEEEecC---CCCCChHHHHHHHhhC
Q 043043          106 FDRKLVMGKGAFGNVYRGTL-RNSMKVAVKRGET---GSGQGLPEFQTAIIVL  154 (154)
Q Consensus       106 f~~~~~iG~g~~g~vy~g~l-~~g~~vaVK~l~~---~~~~~~~~f~~e~~~l  154 (154)
                      |...+.||+|+||.||++.- .+|..||||.+..   ........+.+|+.+|
T Consensus        43 y~i~~~lG~G~fg~Vy~a~~~~~g~~~AvK~i~~~~~~~~~~~~~~~~E~~il   95 (350)
T d1rdqe_          43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRIL   95 (350)
T ss_dssp             EEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHH
T ss_pred             eEEEEEeecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHH
Confidence            55557899999999999986 4689999999842   1233446688888653

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.43  E-value=4.7e-05  Score=54.36  Aligned_cols=48  Identities=19%  Similarity=0.169  Sum_probs=35.4

Q ss_pred             ccccceeecCCCcceEEEEeC-CCCEEEEEEecCCCCCChHHHHHHHhhC
Q 043043          106 FDRKLVMGKGAFGNVYRGTLR-NSMKVAVKRGETGSGQGLPEFQTAIIVL  154 (154)
Q Consensus       106 f~~~~~iG~g~~g~vy~g~l~-~g~~vaVK~l~~~~~~~~~~f~~e~~~l  154 (154)
                      |...+.||+|+||.||++.-. ++..||||.+.... .....+.+|+++|
T Consensus         7 Y~i~~~lG~G~fg~Vy~~~~~~~~~~~AiK~i~~~~-~~~~~~~~Ei~il   55 (321)
T d1tkia_           7 YMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG-TDQVLVKKEISIL   55 (321)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT-HHHHHHHHHHHHH
T ss_pred             eEEEEEEecCCCeEEEEEEECCCCcEEEEEEEcCCc-ccHHHHHHHHHHH
Confidence            444578999999999999864 67899999995432 2234577888653

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.38  E-value=4.8e-05  Score=54.75  Aligned_cols=50  Identities=26%  Similarity=0.256  Sum_probs=37.9

Q ss_pred             CccccceeecCCCcceEEEEe-CCCCEEEEEEecCC---CCCChHHHHHHHhhC
Q 043043          105 NFDRKLVMGKGAFGNVYRGTL-RNSMKVAVKRGETG---SGQGLPEFQTAIIVL  154 (154)
Q Consensus       105 ~f~~~~~iG~g~~g~vy~g~l-~~g~~vaVK~l~~~---~~~~~~~f~~e~~~l  154 (154)
                      +|...++||+|+||.||++.- .+|..||+|.+...   .......+.+|+.+|
T Consensus         6 dy~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il   59 (337)
T d1o6la_           6 DFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVL   59 (337)
T ss_dssp             GEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHH
T ss_pred             hcEEEEEEecCcCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHH
Confidence            456668899999999999986 56899999998521   233456788887653

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.35  E-value=2.3e-05  Score=54.67  Aligned_cols=32  Identities=34%  Similarity=0.692  Sum_probs=27.2

Q ss_pred             ccccceeecCCCcceEEEEe-CCCCEEEEEEec
Q 043043          106 FDRKLVMGKGAFGNVYRGTL-RNSMKVAVKRGE  137 (154)
Q Consensus       106 f~~~~~iG~g~~g~vy~g~l-~~g~~vaVK~l~  137 (154)
                      |.-.++||+|+||.||++.- .+|..||||.+.
T Consensus         6 Y~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~   38 (273)
T d1xwsa_           6 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVE   38 (273)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEE
T ss_pred             EEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEe
Confidence            45557899999999999986 568999999985

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=97.31  E-value=5.7e-05  Score=54.30  Aligned_cols=47  Identities=19%  Similarity=0.116  Sum_probs=33.6

Q ss_pred             ccccceeecCCCcceEEEEe-CCCCEEEEEEecCCCCCChHHHHHHHhh
Q 043043          106 FDRKLVMGKGAFGNVYRGTL-RNSMKVAVKRGETGSGQGLPEFQTAIIV  153 (154)
Q Consensus       106 f~~~~~iG~g~~g~vy~g~l-~~g~~vaVK~l~~~~~~~~~~f~~e~~~  153 (154)
                      +.-..+||+|+||.||+|+- .+|..||||++..... ..+.+.+|+.+
T Consensus        15 Y~i~~~LG~G~fg~Vy~~~~~~~g~~vAvKvi~~~~~-~~~~~~~Ei~~   62 (362)
T d1q8ya_          15 YILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKV-YTEAAEDEIKL   62 (362)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHH-HHHHHHHHHHH
T ss_pred             EEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEecccc-chHHHHHHHHH
Confidence            44457899999999999986 5789999999953211 12455666543

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.27  E-value=3.2e-05  Score=54.62  Aligned_cols=48  Identities=25%  Similarity=0.317  Sum_probs=28.1

Q ss_pred             ccccceeecCCCcceEEEEeC--------CCCEEEEEEecCCCC-CChHHHHHHHhh
Q 043043          106 FDRKLVMGKGAFGNVYRGTLR--------NSMKVAVKRGETGSG-QGLPEFQTAIIV  153 (154)
Q Consensus       106 f~~~~~iG~g~~g~vy~g~l~--------~g~~vaVK~l~~~~~-~~~~~f~~e~~~  153 (154)
                      |...+.||+|+||.||+++..        ++..||||++..... ....+|.+|...
T Consensus        15 ~~l~~~iG~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~e~~~   71 (299)
T d1fgka_          15 LVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEM   71 (299)
T ss_dssp             EEEEEECC-----CEEEEEEECC----CCCEEEEEEECCCTTCCHHHHHHHHHHHHH
T ss_pred             eEEeeEEeecCCcEEEEEEEcCCCcccccCceEEEEEEECcccChHHHHHHHHHHHH
Confidence            444577999999999999862        235799999964332 233567777643

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.25  E-value=8.4e-05  Score=52.99  Aligned_cols=48  Identities=19%  Similarity=0.293  Sum_probs=34.0

Q ss_pred             CccccceeecCCCcceEEEEeC-CCCEEEEEEecCC---CCCChHHHHHHHh
Q 043043          105 NFDRKLVMGKGAFGNVYRGTLR-NSMKVAVKRGETG---SGQGLPEFQTAII  152 (154)
Q Consensus       105 ~f~~~~~iG~g~~g~vy~g~l~-~g~~vaVK~l~~~---~~~~~~~f~~e~~  152 (154)
                      +|...+.||+|+||+||++.-. ++..||||.+...   .......+..|..
T Consensus         3 dy~i~~~iG~G~fg~Vy~~~~~~t~~~vAvK~i~k~~~~~~~~~~~~~~e~~   54 (320)
T d1xjda_           3 DFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKR   54 (320)
T ss_dssp             TEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHH
T ss_pred             CeEEeeEEecCCCcEEEEEEECCCCCEEEEEEEchhhccChHHHHHHHHHHH
Confidence            3555678999999999999874 5789999999421   2333445555553

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.21  E-value=0.00011  Score=51.98  Aligned_cols=32  Identities=38%  Similarity=0.532  Sum_probs=26.6

Q ss_pred             ccccceeecCCCcceEEEEeCCCCEEEEEEecC
Q 043043          106 FDRKLVMGKGAFGNVYRGTLRNSMKVAVKRGET  138 (154)
Q Consensus       106 f~~~~~iG~g~~g~vy~g~l~~g~~vaVK~l~~  138 (154)
                      +...+.||+|+||.||+|++ +|..||||++..
T Consensus         5 ~~l~~~iG~G~fg~Vy~~~~-~g~~vAvK~~~~   36 (303)
T d1vjya_           5 IVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSS   36 (303)
T ss_dssp             EEEEEEEECCSSSEEEEEEE-TTEEEEEEEECG
T ss_pred             EEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECc
Confidence            33456799999999999998 578999999954

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=97.17  E-value=9.7e-05  Score=53.61  Aligned_cols=33  Identities=27%  Similarity=0.488  Sum_probs=28.3

Q ss_pred             CccccceeecCCCcceEEEEeC-CCCEEEEEEec
Q 043043          105 NFDRKLVMGKGAFGNVYRGTLR-NSMKVAVKRGE  137 (154)
Q Consensus       105 ~f~~~~~iG~g~~g~vy~g~l~-~g~~vaVK~l~  137 (154)
                      +|...++||+|+||.||++.-. +|..||||.+.
T Consensus         5 dy~i~~~lG~G~fg~Vy~~~~~~t~~~vAiK~i~   38 (364)
T d1omwa3           5 DFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLD   38 (364)
T ss_dssp             TEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEE
T ss_pred             hCeeeeEEecCCCeEEEEEEECCCCCEEEEEEEc
Confidence            4666788999999999999864 68999999984

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.15  E-value=4.2e-05  Score=54.61  Aligned_cols=48  Identities=23%  Similarity=0.262  Sum_probs=33.2

Q ss_pred             ccccceeecCCCcceEEEEe----CCCCEEEEEEecCC----CCCChHHHHHHHhh
Q 043043          106 FDRKLVMGKGAFGNVYRGTL----RNSMKVAVKRGETG----SGQGLPEFQTAIIV  153 (154)
Q Consensus       106 f~~~~~iG~g~~g~vy~g~l----~~g~~vaVK~l~~~----~~~~~~~f~~e~~~  153 (154)
                      |.-.+.||+|+||+||++.-    ..|+.||||.+...    .......|.+|+++
T Consensus        26 y~~~~~IG~G~fg~Vy~~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~~E~~i   81 (322)
T d1vzoa_          26 FELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQV   81 (322)
T ss_dssp             EEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHH
T ss_pred             eEEEEEEecCCCeEEEEEEECccCCCCcEEEEEEEehHHhccchHHHHHHHHHHHH
Confidence            66667899999999999975    24789999998421    11223445566654

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.06  E-value=0.00035  Score=49.95  Aligned_cols=39  Identities=26%  Similarity=0.280  Sum_probs=30.4

Q ss_pred             ceeecCCCcceEEEEe-CCCCEEEEEEecCCCCCChHHHHHHHhh
Q 043043          110 LVMGKGAFGNVYRGTL-RNSMKVAVKRGETGSGQGLPEFQTAIIV  153 (154)
Q Consensus       110 ~~iG~g~~g~vy~g~l-~~g~~vaVK~l~~~~~~~~~~f~~e~~~  153 (154)
                      .+||+|+||.||++.- .++..||||.+..     ...+.+|+++
T Consensus        18 ~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~-----~~~~~~E~~~   57 (335)
T d2ozaa1          18 QVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVEL   57 (335)
T ss_dssp             EEEEECSSCEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHH
T ss_pred             EEeeeccCeEEEEEEECCCCCEEEEEEECC-----cHHHHHHHHH
Confidence            4699999999999986 5688999999853     2456666654