Citrus Sinensis ID: 043082


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------18
MAADVSDELANHYKTQLFSDFIVVPRKYFFSAWVSQVQSRIHARKHFQLKSSNGHPLNAVSLQDSEILLENLWPNDHSEPQEIEASVPASSEKSGSTLSITVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYARTKLTDEELRNVISKTLTYRIDKKENCEDKMDQFLKRCFYHS
ccccHHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHccccccccccccccccccHHHHHHccccccccccHHHccccccccccccccEEEEEEccccccccccHHHHHHHHHHHcccccccEEEEEEcccccHHHHHHHHHHHHHHHcccccccHHHHHHHHHcccccc
ccccccHHHHHcccccHHHHEEccccccccccHccccccccccccccEEEccccccccccccccccccccccccccccccHHcccccccccccccccEEEEEEccccHHHHHHHHHHHHHHHHcccccccEEEEEEEcccccHHHHHHHHHHHcccccccccccHHHHHHHHHHccccc
MAADVSDELANHYktqlfsdfivvprKYFFSAWVSQVQSRIHARKHfqlkssnghplnavslqdseillenlwpndhsepqeieasvpasseksgstlsITVVGasgdlakkkIFPALFALYyedclpedftvfgyartklTDEELRNVISKTLTYRIDKKENCEDKMDQFLKRCFYHS
MAADVSDELANHYKTQLFSDFIVVPRKYFFSAWVSQVQSRIHARKHFQLKSSNGHPLNAVSLQDSEILLENLWPNDHSEPQEIEAsvpasseksgstLSITVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYArtkltdeelrnvisktltyridkkencedkMDQFLKRCFYHS
MAADVSDELANHYKTQLFSDFIVVPRKYFFSAWVSQVQSRIHARKHFQLKSSNGHPLNAVSLQDSEILLENLWPNDHSEPQEIEASVPASSEKSGSTLSITVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYARTKLTDEELRNVISKTLTYRIDKKENCEDKMDQFLKRCFYHS
*********ANHYKTQLFSDFIVVPRKYFFSAWVSQVQSRIHARKHFQL****************EILLENLW*************************SITVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYARTKLTDEELRNVISKTLTYRIDKKENCEDKMDQFLKRCFY**
*********ANHYKTQLF*******************************************************************************LSITVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYARTKLTDEELRNVISKTLT*********EDKMDQFLKRCFYHS
MAADVSDELANHYKTQLFSDFIVVPRKYFFSAWVSQVQSRIHARKHFQLKSSNGHPLNAVSLQDSEILLENLWPNDHSE*****************TLSITVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYARTKLTDEELRNVISKTLTYRIDKKENCEDKMDQFLKRCFYHS
***********HYKTQLFSDFIVVPRKYFFSAWVSQVQSRIHARKHFQLKS*******************************************GSTLSITVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYARTKLTDEELRNVISKTLTYRIDKKENCEDKMDQFLKRCFYHS
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MAADVSDELANHYKTQLFSDFIVVPRKYFFSAWVSQVQSRIHARKHFQLKSSNGHPLNAVSLQDSEILLENLWPNDHSEPQEIEASVPASSEKSGSTLSITVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYARTKLTDEELRNVISKTLTYRIDKKENCEDKMDQFLKRCFYHS
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query179 2.2.26 [Sep-21-2011]
Q43839 577 Glucose-6-phosphate 1-deh N/A no 0.715 0.221 0.619 7e-47
Q43727 576 Glucose-6-phosphate 1-deh yes no 0.793 0.246 0.595 7e-44
Q43793 593 Glucose-6-phosphate 1-deh N/A no 0.787 0.237 0.558 1e-39
O24357 574 Glucose-6-phosphate 1-deh N/A no 0.709 0.221 0.609 1e-38
Q9FY99 596 Glucose-6-phosphate 1-deh no no 0.502 0.151 0.766 1e-36
Q8L743 599 Glucose-6-phosphate 1-deh no no 0.469 0.140 0.797 1e-35
Q93ZW0 625 Glucose-6-phosphate 1-deh no no 0.458 0.131 0.585 2e-23
Q42919 515 Glucose-6-phosphate 1-deh N/A no 0.469 0.163 0.494 5e-14
Q9LK23 516 Glucose-6-phosphate 1-deh no no 0.452 0.156 0.494 7e-14
Q9FJI5 515 Glucose-6-phosphate 1-deh no no 0.446 0.155 0.517 3e-13
>sp|Q43839|G6PDC_SOLTU Glucose-6-phosphate 1-dehydrogenase, chloroplastic OS=Solanum tuberosum PE=1 SV=1 Back     alignment and function desciption
 Score =  186 bits (472), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 91/147 (61%), Positives = 109/147 (74%), Gaps = 19/147 (12%)

Query: 33  WVSQVQSRIHARKHFQLKSSNGHPLNAVSLQDSEILLENLWPNDHSEPQEIEASVPASSE 92
           WVS + SRI  RKHF++ SSNG PLNAVS+QD ++ L  L   D                
Sbjct: 45  WVSGIYSRIQPRKHFEVFSSNGFPLNAVSVQDVQVPLTELGSGD---------------- 88

Query: 93  KSGSTLSITVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYARTKLTDEELRNVISK 152
              +T+SITV+GASGDLAKKKI PALFAL+YEDCLPE+F VFGY+RTKL+DEELRN+IS 
Sbjct: 89  ---TTVSITVIGASGDLAKKKILPALFALFYEDCLPENFVVFGYSRTKLSDEELRNMIST 145

Query: 153 TLTYRIDKKENCEDKMDQFLKRCFYHS 179
           TLT RIDK+ENC+ KM+ FL+RCFYHS
Sbjct: 146 TLTCRIDKRENCDAKMEHFLERCFYHS 172




Catalyzes the rate-limiting step of the oxidative pentose-phosphate pathway, which represents a route for the dissimilation of carbohydrates besides glycolysis. The main function of this enzyme is to provide reducing power (NADPH) and pentose phosphates for fatty acid and nucleic acid synthesis which are involved in membrane synthesis and cell division. May be involved in nitrite reduction.
Solanum tuberosum (taxid: 4113)
EC: 1EC: .EC: 1EC: .EC: 1EC: .EC: 4EC: 9
>sp|Q43727|G6PD1_ARATH Glucose-6-phosphate 1-dehydrogenase 1, chloroplastic OS=Arabidopsis thaliana GN=APG1 PE=2 SV=2 Back     alignment and function description
>sp|Q43793|G6PDC_TOBAC Glucose-6-phosphate 1-dehydrogenase, chloroplastic OS=Nicotiana tabacum PE=2 SV=1 Back     alignment and function description
>sp|O24357|G6PDC_SPIOL Glucose-6-phosphate 1-dehydrogenase, chloroplastic OS=Spinacia oleracea GN=G6PD PE=2 SV=1 Back     alignment and function description
>sp|Q9FY99|G6PD2_ARATH Glucose-6-phosphate 1-dehydrogenase 2, chloroplastic OS=Arabidopsis thaliana GN=At5g13110 PE=2 SV=2 Back     alignment and function description
>sp|Q8L743|G6PD3_ARATH Glucose-6-phosphate 1-dehydrogenase 3, chloroplastic OS=Arabidopsis thaliana GN=At1g24280 PE=2 SV=2 Back     alignment and function description
>sp|Q93ZW0|G6PD4_ARATH Glucose-6-phosphate 1-dehydrogenase 4, chloroplastic OS=Arabidopsis thaliana GN=At1g09420 PE=2 SV=1 Back     alignment and function description
>sp|Q42919|G6PD_MEDSA Glucose-6-phosphate 1-dehydrogenase, cytoplasmic isoform OS=Medicago sativa PE=2 SV=1 Back     alignment and function description
>sp|Q9LK23|G6PD5_ARATH Glucose-6-phosphate 1-dehydrogenase, cytoplasmic isoform 1 OS=Arabidopsis thaliana GN=ACG9 PE=2 SV=1 Back     alignment and function description
>sp|Q9FJI5|G6PD6_ARATH Glucose-6-phosphate 1-dehydrogenase, cytoplasmic isoform 2 OS=Arabidopsis thaliana GN=ACG12 PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query179
255578725 593 glucose-6-phosphate 1-dehydrogenase, put 0.910 0.274 0.700 7e-59
224131858 571 predicted protein [Populus trichocarpa] 0.776 0.243 0.674 5e-54
225447549 584 PREDICTED: glucose-6-phosphate 1-dehydro 0.854 0.261 0.689 7e-54
296085025 1355 unnamed protein product [Vitis vinifera] 0.854 0.112 0.689 1e-53
449453209 594 PREDICTED: glucose-6-phosphate 1-dehydro 0.877 0.264 0.681 8e-53
356522804 588 PREDICTED: LOW QUALITY PROTEIN: glucose- 0.905 0.275 0.636 9e-50
356528894 588 PREDICTED: glucose-6-phosphate 1-dehydro 0.810 0.246 0.662 1e-46
3023818 577 RecName: Full=Glucose-6-phosphate 1-dehy 0.715 0.221 0.619 3e-45
359485841 892 PREDICTED: glucose-6-phosphate 1-dehydro 0.854 0.171 0.615 9e-45
296085030 585 unnamed protein product [Vitis vinifera] 0.854 0.261 0.615 1e-44
>gi|255578725|ref|XP_002530221.1| glucose-6-phosphate 1-dehydrogenase, putative [Ricinus communis] gi|223530268|gb|EEF32168.1| glucose-6-phosphate 1-dehydrogenase, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  231 bits (590), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 117/167 (70%), Positives = 135/167 (80%), Gaps = 4/167 (2%)

Query: 15  TQLFSDFIVVPRKYFFSAWVSQVQSRIHARKHFQLKSSNGHPLNAVSLQDSEILLENLWP 74
            +L S FI +PR+  FS WVSQ+ SR+H RKHF LKSSNGHPL AVS QD   L EN   
Sbjct: 26  VELLSKFISLPRRSGFSKWVSQIHSRMHGRKHFCLKSSNGHPLPAVSSQDG--LAENHVV 83

Query: 75  NDHSEPQEIEA-SVPAS-SEKSGSTLSITVVGASGDLAKKKIFPALFALYYEDCLPEDFT 132
            +H+EPQ  E  S+P S +EK  S +SITVVGASGDLA+KKIFPALFAL+YED LPE+FT
Sbjct: 84  KEHNEPQRKEGLSIPISEAEKVESNISITVVGASGDLARKKIFPALFALFYEDWLPENFT 143

Query: 133 VFGYARTKLTDEELRNVISKTLTYRIDKKENCEDKMDQFLKRCFYHS 179
           VFGYARTKLTDEELRN+IS+TLT RIDK+ENCEDKM+QFLKRCFY +
Sbjct: 144 VFGYARTKLTDEELRNMISQTLTCRIDKRENCEDKMEQFLKRCFYQA 190




Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224131858|ref|XP_002321196.1| predicted protein [Populus trichocarpa] gi|222861969|gb|EEE99511.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|225447549|ref|XP_002268887.1| PREDICTED: glucose-6-phosphate 1-dehydrogenase, chloroplastic-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|296085025|emb|CBI28440.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|449453209|ref|XP_004144351.1| PREDICTED: glucose-6-phosphate 1-dehydrogenase, chloroplastic-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|356522804|ref|XP_003530034.1| PREDICTED: LOW QUALITY PROTEIN: glucose-6-phosphate 1-dehydrogenase, chloroplastic-like [Glycine max] Back     alignment and taxonomy information
>gi|356528894|ref|XP_003533032.1| PREDICTED: glucose-6-phosphate 1-dehydrogenase, chloroplastic-like [Glycine max] Back     alignment and taxonomy information
>gi|3023818|sp|Q43839.1|G6PDC_SOLTU RecName: Full=Glucose-6-phosphate 1-dehydrogenase, chloroplastic; Short=G6PD; Flags: Precursor gi|1197385|emb|CAA58775.1| glucose-6-phosphate dehydrogenase [Solanum tuberosum] Back     alignment and taxonomy information
>gi|359485841|ref|XP_002268434.2| PREDICTED: glucose-6-phosphate 1-dehydrogenase, chloroplastic-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|296085030|emb|CBI28445.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query179
TAIR|locus:2165154 576 G6PD1 "glucose-6-phosphate deh 0.486 0.151 0.816 6.2e-42
TAIR|locus:2179887 596 G6PD2 "glucose-6-phosphate deh 0.648 0.194 0.641 5.9e-34
TAIR|locus:2032412 599 G6PD3 "glucose-6-phosphate deh 0.932 0.278 0.463 7.9e-34
TAIR|locus:2086558 516 G6PD5 "glucose-6-phosphate deh 0.463 0.160 0.5 6.9e-14
POMBASE|SPAC3A12.18 500 zwf1 "glucose-6-phosphate 1-de 0.435 0.156 0.432 2.3e-13
TAIR|locus:2154805 515 G6PD6 "glucose-6-phosphate deh 0.435 0.151 0.529 2.4e-13
UNIPROTKB|G4MR82 507 MGG_09926 "Glucose-6-phosphate 0.502 0.177 0.425 2.2e-12
DICTYBASE|DDB_G0273639 497 g6pd-2 "glucose 6-phosphate-1- 0.463 0.167 0.433 4.4e-12
DICTYBASE|DDB_G0273131 497 g6pd-1 "glucose 6-phosphate-1- 0.463 0.167 0.433 4.4e-12
POMBASE|SPCC794.01c 475 SPCC794.01c "glucose-6-phospha 0.435 0.164 0.444 4.9e-11
TAIR|locus:2165154 G6PD1 "glucose-6-phosphate dehydrogenase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 372 (136.0 bits), Expect = 6.2e-42, Sum P(2) = 6.2e-42
 Identities = 71/87 (81%), Positives = 79/87 (90%)

Query:    93 KSGSTLSITVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYARTKLTDEELRNVISK 152
             K  STLSITVVGASGDLAKKKIFPALFAL+YE CLP+DF+VFGYARTKLT EELR++IS 
Sbjct:    86 KGESTLSITVVGASGDLAKKKIFPALFALFYEGCLPQDFSVFGYARTKLTHEELRDMISS 145

Query:   153 TLTYRIDKKENCEDKMDQFLKRCFYHS 179
             TLT RID++E C DKM+QFLKRCFYHS
Sbjct:   146 TLTCRIDQREKCGDKMEQFLKRCFYHS 172


GO:0000166 "nucleotide binding" evidence=IEA
GO:0004345 "glucose-6-phosphate dehydrogenase activity" evidence=IEA;ISS;IDA
GO:0006006 "glucose metabolic process" evidence=IEA;ISS;IDA
GO:0009507 "chloroplast" evidence=ISM;ISS;IDA
GO:0050661 "NADP binding" evidence=IEA
GO:0055114 "oxidation-reduction process" evidence=IEA
GO:0009051 "pentose-phosphate shunt, oxidative branch" evidence=IDA
GO:0005515 "protein binding" evidence=IPI
GO:0009570 "chloroplast stroma" evidence=IDA
GO:0009637 "response to blue light" evidence=RCA
GO:0010155 "regulation of proton transport" evidence=RCA
GO:0015979 "photosynthesis" evidence=RCA
GO:0019288 "isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway" evidence=RCA
GO:0046777 "protein autophosphorylation" evidence=RCA
TAIR|locus:2179887 G6PD2 "glucose-6-phosphate dehydrogenase 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2032412 G6PD3 "glucose-6-phosphate dehydrogenase 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2086558 G6PD5 "glucose-6-phosphate dehydrogenase 5" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
POMBASE|SPAC3A12.18 zwf1 "glucose-6-phosphate 1-dehydrogenase (predicted)" [Schizosaccharomyces pombe (taxid:4896)] Back     alignment and assigned GO terms
TAIR|locus:2154805 G6PD6 "glucose-6-phosphate dehydrogenase 6" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|G4MR82 MGG_09926 "Glucose-6-phosphate 1-dehydrogenase" [Magnaporthe oryzae 70-15 (taxid:242507)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0273639 g6pd-2 "glucose 6-phosphate-1-dehydrogenase" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0273131 g6pd-1 "glucose 6-phosphate-1-dehydrogenase" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
POMBASE|SPCC794.01c SPCC794.01c "glucose-6-phosphate 1-dehydrogenase (predicted)" [Schizosaccharomyces pombe (taxid:4896)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Fail to connect to STRING server


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query179
PLN02640 573 PLN02640, PLN02640, glucose-6-phosphate 1-dehydrog 2e-74
PLN02333 604 PLN02333, PLN02333, glucose-6-phosphate 1-dehydrog 6e-51
pfam00479 183 pfam00479, G6PD_N, Glucose-6-phosphate dehydrogena 4e-32
PLN02539 491 PLN02539, PLN02539, glucose-6-phosphate 1-dehydrog 5e-24
PTZ00309 542 PTZ00309, PTZ00309, glucose-6-phosphate 1-dehydrog 1e-21
COG0364 483 COG0364, Zwf, Glucose-6-phosphate 1-dehydrogenase 2e-21
TIGR00871 482 TIGR00871, zwf, glucose-6-phosphate 1-dehydrogenas 2e-21
PRK05722 495 PRK05722, PRK05722, glucose-6-phosphate 1-dehydrog 3e-21
PRK12853 482 PRK12853, PRK12853, glucose-6-phosphate 1-dehydrog 2e-12
PRK12854 484 PRK12854, PRK12854, glucose-6-phosphate 1-dehydrog 4e-07
>gnl|CDD|215344 PLN02640, PLN02640, glucose-6-phosphate 1-dehydrogenase Back     alignment and domain information
 Score =  232 bits (594), Expect = 2e-74
 Identities = 116/163 (71%), Positives = 126/163 (77%), Gaps = 20/163 (12%)

Query: 17  LFSDFIVVPRKYFFSAWVSQVQSRIHARKHFQLKSSNGHPLNAVSLQDSEILLENLWPND 76
           LFS  I  PRK   S +VSQ+ SRIHARKHFQLKSSNGHPLNAVSLQD E    N    +
Sbjct: 28  LFSRSITFPRK---STFVSQIHSRIHARKHFQLKSSNGHPLNAVSLQDGE----NHLTEE 80

Query: 77  HSEPQEIEASVPASSEKSGSTLSITVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGY 136
           H+E  E             STLSITVVGASGDLAKKKIFPALFAL+YED LPE+FTVFGY
Sbjct: 81  HAEKGE-------------STLSITVVGASGDLAKKKIFPALFALFYEDWLPENFTVFGY 127

Query: 137 ARTKLTDEELRNVISKTLTYRIDKKENCEDKMDQFLKRCFYHS 179
           ARTKLTDEELR++IS TLT RID++ENC DKMDQFLKRCFYHS
Sbjct: 128 ARTKLTDEELRDMISSTLTCRIDQRENCGDKMDQFLKRCFYHS 170


Length = 573

>gnl|CDD|215191 PLN02333, PLN02333, glucose-6-phosphate 1-dehydrogenase Back     alignment and domain information
>gnl|CDD|215937 pfam00479, G6PD_N, Glucose-6-phosphate dehydrogenase, NAD binding domain Back     alignment and domain information
>gnl|CDD|178154 PLN02539, PLN02539, glucose-6-phosphate 1-dehydrogenase Back     alignment and domain information
>gnl|CDD|240353 PTZ00309, PTZ00309, glucose-6-phosphate 1-dehydrogenase; Provisional Back     alignment and domain information
>gnl|CDD|223441 COG0364, Zwf, Glucose-6-phosphate 1-dehydrogenase [Carbohydrate transport and metabolism] Back     alignment and domain information
>gnl|CDD|233162 TIGR00871, zwf, glucose-6-phosphate 1-dehydrogenase Back     alignment and domain information
>gnl|CDD|235579 PRK05722, PRK05722, glucose-6-phosphate 1-dehydrogenase; Validated Back     alignment and domain information
>gnl|CDD|237233 PRK12853, PRK12853, glucose-6-phosphate 1-dehydrogenase; Provisional Back     alignment and domain information
>gnl|CDD|237234 PRK12854, PRK12854, glucose-6-phosphate 1-dehydrogenase; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 179
PLN02640 573 glucose-6-phosphate 1-dehydrogenase 100.0
PF00479 183 G6PD_N: Glucose-6-phosphate dehydrogenase, NAD bin 99.92
PLN02333 604 glucose-6-phosphate 1-dehydrogenase 99.9
COG0364 483 Zwf Glucose-6-phosphate 1-dehydrogenase [Carbohydr 99.9
PRK05722 495 glucose-6-phosphate 1-dehydrogenase; Validated 99.89
PRK12854 484 glucose-6-phosphate 1-dehydrogenase; Provisional 99.89
PRK12853 482 glucose-6-phosphate 1-dehydrogenase; Provisional 99.89
TIGR00871 482 zwf glucose-6-phosphate 1-dehydrogenase. This is a 99.88
PLN02539 491 glucose-6-phosphate 1-dehydrogenase 99.88
PTZ00309 542 glucose-6-phosphate 1-dehydrogenase; Provisional 99.85
KOG0563 499 consensus Glucose-6-phosphate 1-dehydrogenase [Car 99.85
PF13460 183 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X 86.27
PF05368 233 NmrA: NmrA-like family; InterPro: IPR008030 NmrA i 84.99
PF1390595 Thioredoxin_8: Thioredoxin-like; PDB: 1FG4_A 1I5G_ 83.81
cd03011123 TlpA_like_ScsD_MtbDsbE TlpA-like family, suppresso 82.51
>PLN02640 glucose-6-phosphate 1-dehydrogenase Back     alignment and domain information
Probab=100.00  E-value=1.1e-34  Score=272.38  Aligned_cols=143  Identities=80%  Similarity=1.194  Sum_probs=125.9

Q ss_pred             hhccceeeccccchhhhhhhhhhccccccceeeeccCCCCCceeecccchhhhccCCCCCCCCchhhhcCCCCCCCCCCC
Q 043082           17 LFSDFIVVPRKYFFSAWVSQVQSRIHARKHFQLKSSNGHPLNAVSLQDSEILLENLWPNDHSEPQEIEASVPASSEKSGS   96 (179)
Q Consensus        17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   96 (179)
                      |+|+-+..|+++   ..|++.+|++|+||||+++++||+|+|++++|||    ++.+.+++.             .+.+.
T Consensus        28 ~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~-------------~~~~~   87 (573)
T PLN02640         28 LFSRSITFPRKS---TFVSQIHSRIHARKHFQLKSSNGHPLNAVSLQDG----ENHLTEEHA-------------EKGES   87 (573)
T ss_pred             chhccccccccc---hHHHHHHHHHhhhhheeeccCCCCcccceecccc----cccccHhhc-------------cCCCC
Confidence            788889999998   7789999999999999999999999999999999    234433322             34466


Q ss_pred             CeEEEEEccchhhhhhhhHHHHHHHHHcCCCCCCceEEEEeCCCCCHHHHHHHHHHHhhhhccCCCCCHHHHHHHHhcCc
Q 043082           97 TLSITVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYARTKLTDEELRNVISKTLTYRIDKKENCEDKMDQFLKRCF  176 (179)
Q Consensus        97 p~slVIFGATGDLAkRKL~PALf~L~~~glLP~~frIIG~aRs~~tdEefr~~V~eaL~~~~~~~~~d~e~~e~Fl~rl~  176 (179)
                      +|+|||||||||||+||||||||+|++.|+||++++|||+||+++++++||++|+++++++.+..+.+++.|++|+++++
T Consensus        88 ~~~iVIFGATGDLA~RKL~PALy~L~~~g~Lp~~~~IIG~aR~~~s~e~fr~~v~~~l~~~~~~~~~~~~~~~~F~~~~~  167 (573)
T PLN02640         88 TLSITVVGASGDLAKKKIFPALFALFYEDWLPENFTVFGYARTKLTDEELRDMISSTLTCRIDQRENCGDKMDQFLKRCF  167 (573)
T ss_pred             CeEEEEeCCccHhhhhhHHHHHHHHHHcCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHhhcccccccHHHHHHHHhcCE
Confidence            89999999999999999999999999999999999999999999999999999999999875322346778999999999


Q ss_pred             ccC
Q 043082          177 YHS  179 (179)
Q Consensus       177 Yv~  179 (179)
                      |++
T Consensus       168 Y~~  170 (573)
T PLN02640        168 YHS  170 (573)
T ss_pred             EEe
Confidence            974



>PF00479 G6PD_N: Glucose-6-phosphate dehydrogenase, NAD binding domain; InterPro: IPR022674 Glucose-6-phosphate dehydrogenase (1 Back     alignment and domain information
>PLN02333 glucose-6-phosphate 1-dehydrogenase Back     alignment and domain information
>COG0364 Zwf Glucose-6-phosphate 1-dehydrogenase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK05722 glucose-6-phosphate 1-dehydrogenase; Validated Back     alignment and domain information
>PRK12854 glucose-6-phosphate 1-dehydrogenase; Provisional Back     alignment and domain information
>PRK12853 glucose-6-phosphate 1-dehydrogenase; Provisional Back     alignment and domain information
>TIGR00871 zwf glucose-6-phosphate 1-dehydrogenase Back     alignment and domain information
>PLN02539 glucose-6-phosphate 1-dehydrogenase Back     alignment and domain information
>PTZ00309 glucose-6-phosphate 1-dehydrogenase; Provisional Back     alignment and domain information
>KOG0563 consensus Glucose-6-phosphate 1-dehydrogenase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B Back     alignment and domain information
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA Back     alignment and domain information
>PF13905 Thioredoxin_8: Thioredoxin-like; PDB: 1FG4_A 1I5G_A 1OC8_B 1O6J_A 1OC9_B 1O81_A 3FKF_A 1O85_A 1O7U_A 1O8W_A Back     alignment and domain information
>cd03011 TlpA_like_ScsD_MtbDsbE TlpA-like family, suppressor for copper sensitivity D protein (ScsD) and actinobacterial DsbE homolog subfamily; composed of ScsD, the DsbE homolog of Mycobacterium tuberculosis (MtbDsbE) and similar proteins, all containing a redox-active CXXC motif Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query179
4e9i_A 541 Glucose-6-P Dehydrogenase (Apo Form) From Trypanoso 5e-12
2bh9_A 489 X-Ray Structure Of A Deletion Variant Of Human Gluc 1e-08
1qki_A 514 X-Ray Structure Of Human Glucose 6-Phosphate Dehydr 2e-08
1e7m_A 485 Active Site Mutant (D177->n) Of Glucose 6-Phosphate 5e-08
2dpg_A 485 Complex Of Inactive Mutant (H240->n) Of Glucose 6-P 5e-08
1h93_A 485 Active Mutant (S215->c) Of Glucose 6-Phosphate Dehy 5e-08
1e77_A 485 Complex Of Active Mutant (Q365->c) Of Glucose 6-Pho 5e-08
1dpg_A 485 Glucose 6-Phosphate Dehydrogenase From Leuconostoc 1e-07
>pdb|4E9I|A Chain A, Glucose-6-P Dehydrogenase (Apo Form) From Trypanosoma Cruzi Length = 541 Back     alignment and structure

Iteration: 1

Score = 67.0 bits (162), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 39/92 (42%), Positives = 54/92 (58%), Gaps = 6/92 (6%) Query: 90 SSEKSGSTLSITVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYARTKLTDEE--LR 147 S E L+I V+GASGDLAKKK FPALF LY LP D + GYAR+ + D E + Sbjct: 47 SPELRSRALTIVVLGASGDLAKKKTFPALFQLYCNGMLPRDVNILGYARSTMEDVEKWKK 106 Query: 148 NVISKTLTYRIDKKENCEDKMDQFLKRCFYHS 179 + ++ T R+D++ C + FL+R Y + Sbjct: 107 DTLAGFFT-RLDER-GCH--VGNFLRRISYMT 134
>pdb|2BH9|A Chain A, X-Ray Structure Of A Deletion Variant Of Human Glucose 6- Phosphate Dehydrogenase Complexed With Structural And Coenzyme Nadp Length = 489 Back     alignment and structure
>pdb|1QKI|A Chain A, X-Ray Structure Of Human Glucose 6-Phosphate Dehydrogenase (Variant Canton R459l) Complexed With Structural Nadp+ Length = 514 Back     alignment and structure
>pdb|1E7M|A Chain A, Active Site Mutant (D177->n) Of Glucose 6-Phosphate Dehydrogenase From Leuconostoc Mesenteroides Length = 485 Back     alignment and structure
>pdb|2DPG|A Chain A, Complex Of Inactive Mutant (H240->n) Of Glucose 6-Phosphate Dehydrogenase From Leuconostoc Mesenteroides With Nadp+ Length = 485 Back     alignment and structure
>pdb|1H93|A Chain A, Active Mutant (S215->c) Of Glucose 6-Phosphate Dehydrogenase From Leuconostoc Mesenteroides Length = 485 Back     alignment and structure
>pdb|1E77|A Chain A, Complex Of Active Mutant (Q365->c) Of Glucose 6-Phosphate Dehydrogenase From Leuconostoc Mesenteroides With Substrate Length = 485 Back     alignment and structure
>pdb|1DPG|A Chain A, Glucose 6-Phosphate Dehydrogenase From Leuconostoc Mesenteroides Length = 485 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query179
2bh9_A 489 G6PD, glucose-6-phosphate 1-dehydrogenase; oxidore 7e-29
4e9i_A 541 Glucose-6-phosphate 1-dehydrogenase; pentose phosp 2e-28
1dpg_A 485 G6PD, glucose 6-phosphate dehydrogenase; oxidoredu 9e-26
>2bh9_A G6PD, glucose-6-phosphate 1-dehydrogenase; oxidoreductase, oxidoreductase (CHOH(D)-NADP), carbohydrate metabolism, glucose metabolism; HET: NAP; 2.5A {Homo sapiens} PDB: 2bhl_A* 1qki_A* Length = 489 Back     alignment and structure
 Score =  109 bits (276), Expect = 7e-29
 Identities = 27/80 (33%), Positives = 46/80 (57%), Gaps = 4/80 (5%)

Query: 100 ITVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYARTKLTDEELRNVISKTLTYRID 159
             ++GASGDLAKKKI+P ++ L+ +  LPE+  + GYAR++LT  ++R           +
Sbjct: 8   FIIMGASGDLAKKKIYPTIWWLFRDGLLPENTFIVGYARSRLTVADIRKQSEPFFKATPE 67

Query: 160 KKENCEDKMDQFLKRCFYHS 179
           +    + K++ F  R  Y +
Sbjct: 68  E----KLKLEDFFARNSYVA 83


>4e9i_A Glucose-6-phosphate 1-dehydrogenase; pentose phosphate pathway, alpha beta, NAD(P) rossmann-like domain, oxidoreductase; 2.85A {Trypanosoma cruzi} PDB: 4em5_A* Length = 541 Back     alignment and structure
>1dpg_A G6PD, glucose 6-phosphate dehydrogenase; oxidoreductase, NADP/NAD, glucose metabolism, oxidoreductase (CHOH(D) - NAD(P)); 2.00A {Leuconostoc mesenteroides} SCOP: c.2.1.3 d.81.1.5 PDB: 1e7y_A* 1e7m_A* 1h93_A 1h94_A* 1h9a_A* 1e77_A* 1h9b_A 2dpg_A* Length = 485 Back     alignment and structure

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query179
1dpg_A 485 G6PD, glucose 6-phosphate dehydrogenase; oxidoredu 99.9
2bh9_A 489 G6PD, glucose-6-phosphate 1-dehydrogenase; oxidore 99.89
4e9i_A 541 Glucose-6-phosphate 1-dehydrogenase; pentose phosp 99.88
>1dpg_A G6PD, glucose 6-phosphate dehydrogenase; oxidoreductase, NADP/NAD, glucose metabolism, oxidoreductase (CHOH(D) - NAD(P)); 2.00A {Leuconostoc mesenteroides} SCOP: c.2.1.3 d.81.1.5 PDB: 1e7y_A* 1e7m_A* 1h93_A 1h94_A* 1h9a_A* 1e77_A* 1h9b_A 2dpg_A* Back     alignment and structure
Probab=99.90  E-value=6.3e-24  Score=195.66  Aligned_cols=81  Identities=27%  Similarity=0.583  Sum_probs=75.8

Q ss_pred             CCCeEEEEEccchhhhhhhhHHHHHHHHHcCCCCCCceEEEEeCCCCCHHHHHHHHHHHhhhhccCCCCCHHHHHHHHhc
Q 043082           95 GSTLSITVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYARTKLTDEELRNVISKTLTYRIDKKENCEDKMDQFLKR  174 (179)
Q Consensus        95 ~~p~slVIFGATGDLAkRKL~PALf~L~~~glLP~~frIIG~aRs~~tdEefr~~V~eaL~~~~~~~~~d~e~~e~Fl~r  174 (179)
                      +.+|+|||||||||||+||||||||+|+++|+||++++|||+||++||+++||++++++++++.    .++++|++|+++
T Consensus         3 ~~~~~~VIFGatGDLA~RKL~PaLy~L~~~g~Lp~~~~iiG~aR~~~~~~~~r~~~~~~l~~~~----~~~~~~~~F~~~   78 (485)
T 1dpg_A            3 EIKTLVTFFGGTGDLAKRKLYPSVFNLYKKGYLQKHFAIVGTARQALNDDEFKQLVRDCIKDFT----DDQAQAEAFIEH   78 (485)
T ss_dssp             CCCEEEEEETTTSHHHHHTHHHHHHHHHHTTSSCSSEEEEEEESSCCCHHHHHHHHHHHHGGGC----SCHHHHHHHHTT
T ss_pred             CCCeEEEEECCcHHHHHHhHHHHHHHHHhcCCCCCCcEEEEEeCCCCCHHHHHHHHHHHHHhcc----cCHHHHHHHHhc
Confidence            4579999999999999999999999999999999999999999999999999999999998864    268899999999


Q ss_pred             CcccC
Q 043082          175 CFYHS  179 (179)
Q Consensus       175 l~Yv~  179 (179)
                      ++|++
T Consensus        79 ~~Y~~   83 (485)
T 1dpg_A           79 FSYRA   83 (485)
T ss_dssp             EEEEE
T ss_pred             CEEec
Confidence            99974



>2bh9_A G6PD, glucose-6-phosphate 1-dehydrogenase; oxidoreductase, oxidoreductase (CHOH(D)-NADP), carbohydrate metabolism, glucose metabolism; HET: NAP; 2.5A {Homo sapiens} PDB: 2bhl_A* 1qki_A* Back     alignment and structure
>4e9i_A Glucose-6-phosphate 1-dehydrogenase; pentose phosphate pathway, alpha beta, NAD(P) rossmann-like domain, oxidoreductase; 2.85A {Trypanosoma cruzi} PDB: 4em5_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 179
d1qkia1 203 c.2.1.3 (A:12-199,A:435-449) Glucose 6-phosphate d 1e-19
d1h9aa1 195 c.2.1.3 (A:1-181,A:413-426) Glucose 6-phosphate de 1e-19
>d1qkia1 c.2.1.3 (A:12-199,A:435-449) Glucose 6-phosphate dehydrogenase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 203 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glucose 6-phosphate dehydrogenase, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]
 Score = 80.0 bits (197), Expect = 1e-19
 Identities = 28/83 (33%), Positives = 45/83 (54%), Gaps = 4/83 (4%)

Query: 97  TLSITVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYARTKLTDEELRNVISKTLTY 156
           T    ++GASGDLAKKKI+P ++ L+ +  LPE+  + GYAR++LT  ++R         
Sbjct: 20  THIFIIMGASGDLAKKKIYPTIWWLFRDGLLPENTFIVGYARSRLTVADIRKQSEP---- 75

Query: 157 RIDKKENCEDKMDQFLKRCFYHS 179
                   + K++ F  R  Y +
Sbjct: 76  FFKATPEEKLKLEDFFARNSYVA 98


>d1h9aa1 c.2.1.3 (A:1-181,A:413-426) Glucose 6-phosphate dehydrogenase, N-terminal domain {Leuconostoc mesenteroides [TaxId: 1245]} Length = 195 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query179
d1h9aa1 195 Glucose 6-phosphate dehydrogenase, N-terminal doma 99.92
d1qkia1 203 Glucose 6-phosphate dehydrogenase, N-terminal doma 99.92
>d1h9aa1 c.2.1.3 (A:1-181,A:413-426) Glucose 6-phosphate dehydrogenase, N-terminal domain {Leuconostoc mesenteroides [TaxId: 1245]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glucose 6-phosphate dehydrogenase, N-terminal domain
species: Leuconostoc mesenteroides [TaxId: 1245]
Probab=99.92  E-value=5.6e-26  Score=184.77  Aligned_cols=81  Identities=28%  Similarity=0.602  Sum_probs=74.8

Q ss_pred             CCCeEEEEEccchhhhhhhhHHHHHHHHHcCCCCCCceEEEEeCCCCCHHHHHHHHHHHhhhhccCCCCCHHHHHHHHhc
Q 043082           95 GSTLSITVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYARTKLTDEELRNVISKTLTYRIDKKENCEDKMDQFLKR  174 (179)
Q Consensus        95 ~~p~slVIFGATGDLAkRKL~PALf~L~~~glLP~~frIIG~aRs~~tdEefr~~V~eaL~~~~~~~~~d~e~~e~Fl~r  174 (179)
                      +.++.|||||||||||+||||||||+|+++|+||++++|||+||+++++|+|+++|+++++++.+    +++.|+.|+++
T Consensus         3 e~~t~lVIFGaTGDLa~RKL~PAL~~L~~~g~lp~~~~Iig~aR~~~~~e~f~~~v~~~l~~~~~----~~~~~~~~~~~   78 (195)
T d1h9aa1           3 EIKTLVTFFGGTGDLAKRKLYPSVFNLYKKGYLQKHFAIVGTARQALNDDEFKQLVRDSIKDFTD----DQAQAEAFIEH   78 (195)
T ss_dssp             CCCEEEEEETTTSHHHHHTHHHHHHHHHHTTSSCSSEEEEEEESSCCCHHHHHHHHHHHHGGGCS----CHHHHHHHHTT
T ss_pred             CCceEEEEECcccHHHHhHHHHHHHHHHHcCCCCCCCEEEEEECCcCcHHHHHHHHHHHHhhccc----hHhhHHHHhhc
Confidence            34678999999999999999999999999999999999999999999999999999999998753    57789999999


Q ss_pred             CcccC
Q 043082          175 CFYHS  179 (179)
Q Consensus       175 l~Yv~  179 (179)
                      +.|++
T Consensus        79 ~~y~~   83 (195)
T d1h9aa1          79 FSYRA   83 (195)
T ss_dssp             EEEEE
T ss_pred             cceee
Confidence            99963



>d1qkia1 c.2.1.3 (A:12-199,A:435-449) Glucose 6-phosphate dehydrogenase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure