Citrus Sinensis ID: 043082
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 179 | ||||||
| 255578725 | 593 | glucose-6-phosphate 1-dehydrogenase, put | 0.910 | 0.274 | 0.700 | 7e-59 | |
| 224131858 | 571 | predicted protein [Populus trichocarpa] | 0.776 | 0.243 | 0.674 | 5e-54 | |
| 225447549 | 584 | PREDICTED: glucose-6-phosphate 1-dehydro | 0.854 | 0.261 | 0.689 | 7e-54 | |
| 296085025 | 1355 | unnamed protein product [Vitis vinifera] | 0.854 | 0.112 | 0.689 | 1e-53 | |
| 449453209 | 594 | PREDICTED: glucose-6-phosphate 1-dehydro | 0.877 | 0.264 | 0.681 | 8e-53 | |
| 356522804 | 588 | PREDICTED: LOW QUALITY PROTEIN: glucose- | 0.905 | 0.275 | 0.636 | 9e-50 | |
| 356528894 | 588 | PREDICTED: glucose-6-phosphate 1-dehydro | 0.810 | 0.246 | 0.662 | 1e-46 | |
| 3023818 | 577 | RecName: Full=Glucose-6-phosphate 1-dehy | 0.715 | 0.221 | 0.619 | 3e-45 | |
| 359485841 | 892 | PREDICTED: glucose-6-phosphate 1-dehydro | 0.854 | 0.171 | 0.615 | 9e-45 | |
| 296085030 | 585 | unnamed protein product [Vitis vinifera] | 0.854 | 0.261 | 0.615 | 1e-44 |
| >gi|255578725|ref|XP_002530221.1| glucose-6-phosphate 1-dehydrogenase, putative [Ricinus communis] gi|223530268|gb|EEF32168.1| glucose-6-phosphate 1-dehydrogenase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 231 bits (590), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 117/167 (70%), Positives = 135/167 (80%), Gaps = 4/167 (2%)
Query: 15 TQLFSDFIVVPRKYFFSAWVSQVQSRIHARKHFQLKSSNGHPLNAVSLQDSEILLENLWP 74
+L S FI +PR+ FS WVSQ+ SR+H RKHF LKSSNGHPL AVS QD L EN
Sbjct: 26 VELLSKFISLPRRSGFSKWVSQIHSRMHGRKHFCLKSSNGHPLPAVSSQDG--LAENHVV 83
Query: 75 NDHSEPQEIEA-SVPAS-SEKSGSTLSITVVGASGDLAKKKIFPALFALYYEDCLPEDFT 132
+H+EPQ E S+P S +EK S +SITVVGASGDLA+KKIFPALFAL+YED LPE+FT
Sbjct: 84 KEHNEPQRKEGLSIPISEAEKVESNISITVVGASGDLARKKIFPALFALFYEDWLPENFT 143
Query: 133 VFGYARTKLTDEELRNVISKTLTYRIDKKENCEDKMDQFLKRCFYHS 179
VFGYARTKLTDEELRN+IS+TLT RIDK+ENCEDKM+QFLKRCFY +
Sbjct: 144 VFGYARTKLTDEELRNMISQTLTCRIDKRENCEDKMEQFLKRCFYQA 190
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224131858|ref|XP_002321196.1| predicted protein [Populus trichocarpa] gi|222861969|gb|EEE99511.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|225447549|ref|XP_002268887.1| PREDICTED: glucose-6-phosphate 1-dehydrogenase, chloroplastic-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|296085025|emb|CBI28440.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|449453209|ref|XP_004144351.1| PREDICTED: glucose-6-phosphate 1-dehydrogenase, chloroplastic-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
| >gi|356522804|ref|XP_003530034.1| PREDICTED: LOW QUALITY PROTEIN: glucose-6-phosphate 1-dehydrogenase, chloroplastic-like [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|356528894|ref|XP_003533032.1| PREDICTED: glucose-6-phosphate 1-dehydrogenase, chloroplastic-like [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|3023818|sp|Q43839.1|G6PDC_SOLTU RecName: Full=Glucose-6-phosphate 1-dehydrogenase, chloroplastic; Short=G6PD; Flags: Precursor gi|1197385|emb|CAA58775.1| glucose-6-phosphate dehydrogenase [Solanum tuberosum] | Back alignment and taxonomy information |
|---|
| >gi|359485841|ref|XP_002268434.2| PREDICTED: glucose-6-phosphate 1-dehydrogenase, chloroplastic-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|296085030|emb|CBI28445.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 179 | ||||||
| TAIR|locus:2165154 | 576 | G6PD1 "glucose-6-phosphate deh | 0.486 | 0.151 | 0.816 | 6.2e-42 | |
| TAIR|locus:2179887 | 596 | G6PD2 "glucose-6-phosphate deh | 0.648 | 0.194 | 0.641 | 5.9e-34 | |
| TAIR|locus:2032412 | 599 | G6PD3 "glucose-6-phosphate deh | 0.932 | 0.278 | 0.463 | 7.9e-34 | |
| TAIR|locus:2086558 | 516 | G6PD5 "glucose-6-phosphate deh | 0.463 | 0.160 | 0.5 | 6.9e-14 | |
| POMBASE|SPAC3A12.18 | 500 | zwf1 "glucose-6-phosphate 1-de | 0.435 | 0.156 | 0.432 | 2.3e-13 | |
| TAIR|locus:2154805 | 515 | G6PD6 "glucose-6-phosphate deh | 0.435 | 0.151 | 0.529 | 2.4e-13 | |
| UNIPROTKB|G4MR82 | 507 | MGG_09926 "Glucose-6-phosphate | 0.502 | 0.177 | 0.425 | 2.2e-12 | |
| DICTYBASE|DDB_G0273639 | 497 | g6pd-2 "glucose 6-phosphate-1- | 0.463 | 0.167 | 0.433 | 4.4e-12 | |
| DICTYBASE|DDB_G0273131 | 497 | g6pd-1 "glucose 6-phosphate-1- | 0.463 | 0.167 | 0.433 | 4.4e-12 | |
| POMBASE|SPCC794.01c | 475 | SPCC794.01c "glucose-6-phospha | 0.435 | 0.164 | 0.444 | 4.9e-11 |
| TAIR|locus:2165154 G6PD1 "glucose-6-phosphate dehydrogenase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 372 (136.0 bits), Expect = 6.2e-42, Sum P(2) = 6.2e-42
Identities = 71/87 (81%), Positives = 79/87 (90%)
Query: 93 KSGSTLSITVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYARTKLTDEELRNVISK 152
K STLSITVVGASGDLAKKKIFPALFAL+YE CLP+DF+VFGYARTKLT EELR++IS
Sbjct: 86 KGESTLSITVVGASGDLAKKKIFPALFALFYEGCLPQDFSVFGYARTKLTHEELRDMISS 145
Query: 153 TLTYRIDKKENCEDKMDQFLKRCFYHS 179
TLT RID++E C DKM+QFLKRCFYHS
Sbjct: 146 TLTCRIDQREKCGDKMEQFLKRCFYHS 172
|
|
| TAIR|locus:2179887 G6PD2 "glucose-6-phosphate dehydrogenase 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2032412 G6PD3 "glucose-6-phosphate dehydrogenase 3" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2086558 G6PD5 "glucose-6-phosphate dehydrogenase 5" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| POMBASE|SPAC3A12.18 zwf1 "glucose-6-phosphate 1-dehydrogenase (predicted)" [Schizosaccharomyces pombe (taxid:4896)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2154805 G6PD6 "glucose-6-phosphate dehydrogenase 6" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|G4MR82 MGG_09926 "Glucose-6-phosphate 1-dehydrogenase" [Magnaporthe oryzae 70-15 (taxid:242507)] | Back alignment and assigned GO terms |
|---|
| DICTYBASE|DDB_G0273639 g6pd-2 "glucose 6-phosphate-1-dehydrogenase" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
| DICTYBASE|DDB_G0273131 g6pd-1 "glucose 6-phosphate-1-dehydrogenase" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
| POMBASE|SPCC794.01c SPCC794.01c "glucose-6-phosphate 1-dehydrogenase (predicted)" [Schizosaccharomyces pombe (taxid:4896)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 179 | |||
| PLN02640 | 573 | PLN02640, PLN02640, glucose-6-phosphate 1-dehydrog | 2e-74 | |
| PLN02333 | 604 | PLN02333, PLN02333, glucose-6-phosphate 1-dehydrog | 6e-51 | |
| pfam00479 | 183 | pfam00479, G6PD_N, Glucose-6-phosphate dehydrogena | 4e-32 | |
| PLN02539 | 491 | PLN02539, PLN02539, glucose-6-phosphate 1-dehydrog | 5e-24 | |
| PTZ00309 | 542 | PTZ00309, PTZ00309, glucose-6-phosphate 1-dehydrog | 1e-21 | |
| COG0364 | 483 | COG0364, Zwf, Glucose-6-phosphate 1-dehydrogenase | 2e-21 | |
| TIGR00871 | 482 | TIGR00871, zwf, glucose-6-phosphate 1-dehydrogenas | 2e-21 | |
| PRK05722 | 495 | PRK05722, PRK05722, glucose-6-phosphate 1-dehydrog | 3e-21 | |
| PRK12853 | 482 | PRK12853, PRK12853, glucose-6-phosphate 1-dehydrog | 2e-12 | |
| PRK12854 | 484 | PRK12854, PRK12854, glucose-6-phosphate 1-dehydrog | 4e-07 |
| >gnl|CDD|215344 PLN02640, PLN02640, glucose-6-phosphate 1-dehydrogenase | Back alignment and domain information |
|---|
Score = 232 bits (594), Expect = 2e-74
Identities = 116/163 (71%), Positives = 126/163 (77%), Gaps = 20/163 (12%)
Query: 17 LFSDFIVVPRKYFFSAWVSQVQSRIHARKHFQLKSSNGHPLNAVSLQDSEILLENLWPND 76
LFS I PRK S +VSQ+ SRIHARKHFQLKSSNGHPLNAVSLQD E N +
Sbjct: 28 LFSRSITFPRK---STFVSQIHSRIHARKHFQLKSSNGHPLNAVSLQDGE----NHLTEE 80
Query: 77 HSEPQEIEASVPASSEKSGSTLSITVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGY 136
H+E E STLSITVVGASGDLAKKKIFPALFAL+YED LPE+FTVFGY
Sbjct: 81 HAEKGE-------------STLSITVVGASGDLAKKKIFPALFALFYEDWLPENFTVFGY 127
Query: 137 ARTKLTDEELRNVISKTLTYRIDKKENCEDKMDQFLKRCFYHS 179
ARTKLTDEELR++IS TLT RID++ENC DKMDQFLKRCFYHS
Sbjct: 128 ARTKLTDEELRDMISSTLTCRIDQRENCGDKMDQFLKRCFYHS 170
|
Length = 573 |
| >gnl|CDD|215191 PLN02333, PLN02333, glucose-6-phosphate 1-dehydrogenase | Back alignment and domain information |
|---|
| >gnl|CDD|215937 pfam00479, G6PD_N, Glucose-6-phosphate dehydrogenase, NAD binding domain | Back alignment and domain information |
|---|
| >gnl|CDD|178154 PLN02539, PLN02539, glucose-6-phosphate 1-dehydrogenase | Back alignment and domain information |
|---|
| >gnl|CDD|240353 PTZ00309, PTZ00309, glucose-6-phosphate 1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|223441 COG0364, Zwf, Glucose-6-phosphate 1-dehydrogenase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >gnl|CDD|233162 TIGR00871, zwf, glucose-6-phosphate 1-dehydrogenase | Back alignment and domain information |
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| >gnl|CDD|235579 PRK05722, PRK05722, glucose-6-phosphate 1-dehydrogenase; Validated | Back alignment and domain information |
|---|
| >gnl|CDD|237233 PRK12853, PRK12853, glucose-6-phosphate 1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|237234 PRK12854, PRK12854, glucose-6-phosphate 1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 179 | |||
| PLN02640 | 573 | glucose-6-phosphate 1-dehydrogenase | 100.0 | |
| PF00479 | 183 | G6PD_N: Glucose-6-phosphate dehydrogenase, NAD bin | 99.92 | |
| PLN02333 | 604 | glucose-6-phosphate 1-dehydrogenase | 99.9 | |
| COG0364 | 483 | Zwf Glucose-6-phosphate 1-dehydrogenase [Carbohydr | 99.9 | |
| PRK05722 | 495 | glucose-6-phosphate 1-dehydrogenase; Validated | 99.89 | |
| PRK12854 | 484 | glucose-6-phosphate 1-dehydrogenase; Provisional | 99.89 | |
| PRK12853 | 482 | glucose-6-phosphate 1-dehydrogenase; Provisional | 99.89 | |
| TIGR00871 | 482 | zwf glucose-6-phosphate 1-dehydrogenase. This is a | 99.88 | |
| PLN02539 | 491 | glucose-6-phosphate 1-dehydrogenase | 99.88 | |
| PTZ00309 | 542 | glucose-6-phosphate 1-dehydrogenase; Provisional | 99.85 | |
| KOG0563 | 499 | consensus Glucose-6-phosphate 1-dehydrogenase [Car | 99.85 | |
| PF13460 | 183 | NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X | 86.27 | |
| PF05368 | 233 | NmrA: NmrA-like family; InterPro: IPR008030 NmrA i | 84.99 | |
| PF13905 | 95 | Thioredoxin_8: Thioredoxin-like; PDB: 1FG4_A 1I5G_ | 83.81 | |
| cd03011 | 123 | TlpA_like_ScsD_MtbDsbE TlpA-like family, suppresso | 82.51 |
| >PLN02640 glucose-6-phosphate 1-dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-34 Score=272.38 Aligned_cols=143 Identities=80% Similarity=1.194 Sum_probs=125.9
Q ss_pred hhccceeeccccchhhhhhhhhhccccccceeeeccCCCCCceeecccchhhhccCCCCCCCCchhhhcCCCCCCCCCCC
Q 043082 17 LFSDFIVVPRKYFFSAWVSQVQSRIHARKHFQLKSSNGHPLNAVSLQDSEILLENLWPNDHSEPQEIEASVPASSEKSGS 96 (179)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (179)
|+|+-+..|+++ ..|++.+|++|+||||+++++||+|+|++++||| ++.+.+++. .+.+.
T Consensus 28 ~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~-------------~~~~~ 87 (573)
T PLN02640 28 LFSRSITFPRKS---TFVSQIHSRIHARKHFQLKSSNGHPLNAVSLQDG----ENHLTEEHA-------------EKGES 87 (573)
T ss_pred chhccccccccc---hHHHHHHHHHhhhhheeeccCCCCcccceecccc----cccccHhhc-------------cCCCC
Confidence 788889999998 7789999999999999999999999999999999 234433322 34466
Q ss_pred CeEEEEEccchhhhhhhhHHHHHHHHHcCCCCCCceEEEEeCCCCCHHHHHHHHHHHhhhhccCCCCCHHHHHHHHhcCc
Q 043082 97 TLSITVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYARTKLTDEELRNVISKTLTYRIDKKENCEDKMDQFLKRCF 176 (179)
Q Consensus 97 p~slVIFGATGDLAkRKL~PALf~L~~~glLP~~frIIG~aRs~~tdEefr~~V~eaL~~~~~~~~~d~e~~e~Fl~rl~ 176 (179)
+|+|||||||||||+||||||||+|++.|+||++++|||+||+++++++||++|+++++++.+..+.+++.|++|+++++
T Consensus 88 ~~~iVIFGATGDLA~RKL~PALy~L~~~g~Lp~~~~IIG~aR~~~s~e~fr~~v~~~l~~~~~~~~~~~~~~~~F~~~~~ 167 (573)
T PLN02640 88 TLSITVVGASGDLAKKKIFPALFALFYEDWLPENFTVFGYARTKLTDEELRDMISSTLTCRIDQRENCGDKMDQFLKRCF 167 (573)
T ss_pred CeEEEEeCCccHhhhhhHHHHHHHHHHcCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHhhcccccccHHHHHHHHhcCE
Confidence 89999999999999999999999999999999999999999999999999999999999875322346778999999999
Q ss_pred ccC
Q 043082 177 YHS 179 (179)
Q Consensus 177 Yv~ 179 (179)
|++
T Consensus 168 Y~~ 170 (573)
T PLN02640 168 YHS 170 (573)
T ss_pred EEe
Confidence 974
|
|
| >PF00479 G6PD_N: Glucose-6-phosphate dehydrogenase, NAD binding domain; InterPro: IPR022674 Glucose-6-phosphate dehydrogenase (1 | Back alignment and domain information |
|---|
| >PLN02333 glucose-6-phosphate 1-dehydrogenase | Back alignment and domain information |
|---|
| >COG0364 Zwf Glucose-6-phosphate 1-dehydrogenase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >PRK05722 glucose-6-phosphate 1-dehydrogenase; Validated | Back alignment and domain information |
|---|
| >PRK12854 glucose-6-phosphate 1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
| >PRK12853 glucose-6-phosphate 1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
| >TIGR00871 zwf glucose-6-phosphate 1-dehydrogenase | Back alignment and domain information |
|---|
| >PLN02539 glucose-6-phosphate 1-dehydrogenase | Back alignment and domain information |
|---|
| >PTZ00309 glucose-6-phosphate 1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
| >KOG0563 consensus Glucose-6-phosphate 1-dehydrogenase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B | Back alignment and domain information |
|---|
| >PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA | Back alignment and domain information |
|---|
| >PF13905 Thioredoxin_8: Thioredoxin-like; PDB: 1FG4_A 1I5G_A 1OC8_B 1O6J_A 1OC9_B 1O81_A 3FKF_A 1O85_A 1O7U_A 1O8W_A | Back alignment and domain information |
|---|
| >cd03011 TlpA_like_ScsD_MtbDsbE TlpA-like family, suppressor for copper sensitivity D protein (ScsD) and actinobacterial DsbE homolog subfamily; composed of ScsD, the DsbE homolog of Mycobacterium tuberculosis (MtbDsbE) and similar proteins, all containing a redox-active CXXC motif | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 179 | ||||
| 4e9i_A | 541 | Glucose-6-P Dehydrogenase (Apo Form) From Trypanoso | 5e-12 | ||
| 2bh9_A | 489 | X-Ray Structure Of A Deletion Variant Of Human Gluc | 1e-08 | ||
| 1qki_A | 514 | X-Ray Structure Of Human Glucose 6-Phosphate Dehydr | 2e-08 | ||
| 1e7m_A | 485 | Active Site Mutant (D177->n) Of Glucose 6-Phosphate | 5e-08 | ||
| 2dpg_A | 485 | Complex Of Inactive Mutant (H240->n) Of Glucose 6-P | 5e-08 | ||
| 1h93_A | 485 | Active Mutant (S215->c) Of Glucose 6-Phosphate Dehy | 5e-08 | ||
| 1e77_A | 485 | Complex Of Active Mutant (Q365->c) Of Glucose 6-Pho | 5e-08 | ||
| 1dpg_A | 485 | Glucose 6-Phosphate Dehydrogenase From Leuconostoc | 1e-07 |
| >pdb|4E9I|A Chain A, Glucose-6-P Dehydrogenase (Apo Form) From Trypanosoma Cruzi Length = 541 | Back alignment and structure |
|
| >pdb|2BH9|A Chain A, X-Ray Structure Of A Deletion Variant Of Human Glucose 6- Phosphate Dehydrogenase Complexed With Structural And Coenzyme Nadp Length = 489 | Back alignment and structure |
| >pdb|1QKI|A Chain A, X-Ray Structure Of Human Glucose 6-Phosphate Dehydrogenase (Variant Canton R459l) Complexed With Structural Nadp+ Length = 514 | Back alignment and structure |
| >pdb|1E7M|A Chain A, Active Site Mutant (D177->n) Of Glucose 6-Phosphate Dehydrogenase From Leuconostoc Mesenteroides Length = 485 | Back alignment and structure |
| >pdb|2DPG|A Chain A, Complex Of Inactive Mutant (H240->n) Of Glucose 6-Phosphate Dehydrogenase From Leuconostoc Mesenteroides With Nadp+ Length = 485 | Back alignment and structure |
| >pdb|1H93|A Chain A, Active Mutant (S215->c) Of Glucose 6-Phosphate Dehydrogenase From Leuconostoc Mesenteroides Length = 485 | Back alignment and structure |
| >pdb|1E77|A Chain A, Complex Of Active Mutant (Q365->c) Of Glucose 6-Phosphate Dehydrogenase From Leuconostoc Mesenteroides With Substrate Length = 485 | Back alignment and structure |
| >pdb|1DPG|A Chain A, Glucose 6-Phosphate Dehydrogenase From Leuconostoc Mesenteroides Length = 485 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 179 | |||
| 2bh9_A | 489 | G6PD, glucose-6-phosphate 1-dehydrogenase; oxidore | 7e-29 | |
| 4e9i_A | 541 | Glucose-6-phosphate 1-dehydrogenase; pentose phosp | 2e-28 | |
| 1dpg_A | 485 | G6PD, glucose 6-phosphate dehydrogenase; oxidoredu | 9e-26 |
| >2bh9_A G6PD, glucose-6-phosphate 1-dehydrogenase; oxidoreductase, oxidoreductase (CHOH(D)-NADP), carbohydrate metabolism, glucose metabolism; HET: NAP; 2.5A {Homo sapiens} PDB: 2bhl_A* 1qki_A* Length = 489 | Back alignment and structure |
|---|
Score = 109 bits (276), Expect = 7e-29
Identities = 27/80 (33%), Positives = 46/80 (57%), Gaps = 4/80 (5%)
Query: 100 ITVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYARTKLTDEELRNVISKTLTYRID 159
++GASGDLAKKKI+P ++ L+ + LPE+ + GYAR++LT ++R +
Sbjct: 8 FIIMGASGDLAKKKIYPTIWWLFRDGLLPENTFIVGYARSRLTVADIRKQSEPFFKATPE 67
Query: 160 KKENCEDKMDQFLKRCFYHS 179
+ + K++ F R Y +
Sbjct: 68 E----KLKLEDFFARNSYVA 83
|
| >4e9i_A Glucose-6-phosphate 1-dehydrogenase; pentose phosphate pathway, alpha beta, NAD(P) rossmann-like domain, oxidoreductase; 2.85A {Trypanosoma cruzi} PDB: 4em5_A* Length = 541 | Back alignment and structure |
|---|
| >1dpg_A G6PD, glucose 6-phosphate dehydrogenase; oxidoreductase, NADP/NAD, glucose metabolism, oxidoreductase (CHOH(D) - NAD(P)); 2.00A {Leuconostoc mesenteroides} SCOP: c.2.1.3 d.81.1.5 PDB: 1e7y_A* 1e7m_A* 1h93_A 1h94_A* 1h9a_A* 1e77_A* 1h9b_A 2dpg_A* Length = 485 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 179 | |||
| 1dpg_A | 485 | G6PD, glucose 6-phosphate dehydrogenase; oxidoredu | 99.9 | |
| 2bh9_A | 489 | G6PD, glucose-6-phosphate 1-dehydrogenase; oxidore | 99.89 | |
| 4e9i_A | 541 | Glucose-6-phosphate 1-dehydrogenase; pentose phosp | 99.88 |
| >1dpg_A G6PD, glucose 6-phosphate dehydrogenase; oxidoreductase, NADP/NAD, glucose metabolism, oxidoreductase (CHOH(D) - NAD(P)); 2.00A {Leuconostoc mesenteroides} SCOP: c.2.1.3 d.81.1.5 PDB: 1e7y_A* 1e7m_A* 1h93_A 1h94_A* 1h9a_A* 1e77_A* 1h9b_A 2dpg_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=6.3e-24 Score=195.66 Aligned_cols=81 Identities=27% Similarity=0.583 Sum_probs=75.8
Q ss_pred CCCeEEEEEccchhhhhhhhHHHHHHHHHcCCCCCCceEEEEeCCCCCHHHHHHHHHHHhhhhccCCCCCHHHHHHHHhc
Q 043082 95 GSTLSITVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYARTKLTDEELRNVISKTLTYRIDKKENCEDKMDQFLKR 174 (179)
Q Consensus 95 ~~p~slVIFGATGDLAkRKL~PALf~L~~~glLP~~frIIG~aRs~~tdEefr~~V~eaL~~~~~~~~~d~e~~e~Fl~r 174 (179)
+.+|+|||||||||||+||||||||+|+++|+||++++|||+||++||+++||++++++++++. .++++|++|+++
T Consensus 3 ~~~~~~VIFGatGDLA~RKL~PaLy~L~~~g~Lp~~~~iiG~aR~~~~~~~~r~~~~~~l~~~~----~~~~~~~~F~~~ 78 (485)
T 1dpg_A 3 EIKTLVTFFGGTGDLAKRKLYPSVFNLYKKGYLQKHFAIVGTARQALNDDEFKQLVRDCIKDFT----DDQAQAEAFIEH 78 (485)
T ss_dssp CCCEEEEEETTTSHHHHHTHHHHHHHHHHTTSSCSSEEEEEEESSCCCHHHHHHHHHHHHGGGC----SCHHHHHHHHTT
T ss_pred CCCeEEEEECCcHHHHHHhHHHHHHHHHhcCCCCCCcEEEEEeCCCCCHHHHHHHHHHHHHhcc----cCHHHHHHHHhc
Confidence 4579999999999999999999999999999999999999999999999999999999998864 268899999999
Q ss_pred CcccC
Q 043082 175 CFYHS 179 (179)
Q Consensus 175 l~Yv~ 179 (179)
++|++
T Consensus 79 ~~Y~~ 83 (485)
T 1dpg_A 79 FSYRA 83 (485)
T ss_dssp EEEEE
T ss_pred CEEec
Confidence 99974
|
| >2bh9_A G6PD, glucose-6-phosphate 1-dehydrogenase; oxidoreductase, oxidoreductase (CHOH(D)-NADP), carbohydrate metabolism, glucose metabolism; HET: NAP; 2.5A {Homo sapiens} PDB: 2bhl_A* 1qki_A* | Back alignment and structure |
|---|
| >4e9i_A Glucose-6-phosphate 1-dehydrogenase; pentose phosphate pathway, alpha beta, NAD(P) rossmann-like domain, oxidoreductase; 2.85A {Trypanosoma cruzi} PDB: 4em5_A* | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 179 | ||||
| d1qkia1 | 203 | c.2.1.3 (A:12-199,A:435-449) Glucose 6-phosphate d | 1e-19 | |
| d1h9aa1 | 195 | c.2.1.3 (A:1-181,A:413-426) Glucose 6-phosphate de | 1e-19 |
| >d1qkia1 c.2.1.3 (A:12-199,A:435-449) Glucose 6-phosphate dehydrogenase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 203 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glucose 6-phosphate dehydrogenase, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 80.0 bits (197), Expect = 1e-19
Identities = 28/83 (33%), Positives = 45/83 (54%), Gaps = 4/83 (4%)
Query: 97 TLSITVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYARTKLTDEELRNVISKTLTY 156
T ++GASGDLAKKKI+P ++ L+ + LPE+ + GYAR++LT ++R
Sbjct: 20 THIFIIMGASGDLAKKKIYPTIWWLFRDGLLPENTFIVGYARSRLTVADIRKQSEP---- 75
Query: 157 RIDKKENCEDKMDQFLKRCFYHS 179
+ K++ F R Y +
Sbjct: 76 FFKATPEEKLKLEDFFARNSYVA 98
|
| >d1h9aa1 c.2.1.3 (A:1-181,A:413-426) Glucose 6-phosphate dehydrogenase, N-terminal domain {Leuconostoc mesenteroides [TaxId: 1245]} Length = 195 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 179 | |||
| d1h9aa1 | 195 | Glucose 6-phosphate dehydrogenase, N-terminal doma | 99.92 | |
| d1qkia1 | 203 | Glucose 6-phosphate dehydrogenase, N-terminal doma | 99.92 |
| >d1h9aa1 c.2.1.3 (A:1-181,A:413-426) Glucose 6-phosphate dehydrogenase, N-terminal domain {Leuconostoc mesenteroides [TaxId: 1245]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glucose 6-phosphate dehydrogenase, N-terminal domain species: Leuconostoc mesenteroides [TaxId: 1245]
Probab=99.92 E-value=5.6e-26 Score=184.77 Aligned_cols=81 Identities=28% Similarity=0.602 Sum_probs=74.8
Q ss_pred CCCeEEEEEccchhhhhhhhHHHHHHHHHcCCCCCCceEEEEeCCCCCHHHHHHHHHHHhhhhccCCCCCHHHHHHHHhc
Q 043082 95 GSTLSITVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYARTKLTDEELRNVISKTLTYRIDKKENCEDKMDQFLKR 174 (179)
Q Consensus 95 ~~p~slVIFGATGDLAkRKL~PALf~L~~~glLP~~frIIG~aRs~~tdEefr~~V~eaL~~~~~~~~~d~e~~e~Fl~r 174 (179)
+.++.|||||||||||+||||||||+|+++|+||++++|||+||+++++|+|+++|+++++++.+ +++.|+.|+++
T Consensus 3 e~~t~lVIFGaTGDLa~RKL~PAL~~L~~~g~lp~~~~Iig~aR~~~~~e~f~~~v~~~l~~~~~----~~~~~~~~~~~ 78 (195)
T d1h9aa1 3 EIKTLVTFFGGTGDLAKRKLYPSVFNLYKKGYLQKHFAIVGTARQALNDDEFKQLVRDSIKDFTD----DQAQAEAFIEH 78 (195)
T ss_dssp CCCEEEEEETTTSHHHHHTHHHHHHHHHHTTSSCSSEEEEEEESSCCCHHHHHHHHHHHHGGGCS----CHHHHHHHHTT
T ss_pred CCceEEEEECcccHHHHhHHHHHHHHHHHcCCCCCCCEEEEEECCcCcHHHHHHHHHHHHhhccc----hHhhHHHHhhc
Confidence 34678999999999999999999999999999999999999999999999999999999998753 57789999999
Q ss_pred CcccC
Q 043082 175 CFYHS 179 (179)
Q Consensus 175 l~Yv~ 179 (179)
+.|++
T Consensus 79 ~~y~~ 83 (195)
T d1h9aa1 79 FSYRA 83 (195)
T ss_dssp EEEEE
T ss_pred cceee
Confidence 99963
|
| >d1qkia1 c.2.1.3 (A:12-199,A:435-449) Glucose 6-phosphate dehydrogenase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|